##maf version=1 scoring=roast.v3.3 a score=2980733.000000 s hg38.chr5_KI270795v1_alt 0 1362 + 131892 Tccccttccctcagcctctggcaaccactattctactttctgtttctatgaattagactattctagaaatctcatataagtggaattatacagcatttctgtttttgtaactggtttatttcactttgcaaaatgtgttcaaagttcaaactcatgttgtagcatgtgtcagaa-----tttctttttaaagctgaataatattctattatatgtatttatcacatcttgtttacccattcatctgtcactgaacacttggatttcttccatcttttccctattgtgaataatgctgctgtgaacatgggtatatggcgatctccttgagaccctgcttttcaattctttttgggtctataccccaaaacagaattgctttatcatatggtaattctatttttaactttttgggaaactgccatactgttttccaatgtgacttcaccattttccattcccaccaatagtgcacaatggtttcaatttctacacacccttgccaacactttttattt--tctg-ctcattttttaaatagtagccatcataatgggtatgaagtagcatctcattatcatttcaattttaatttttgctttttttttttttt--tttgagacagggtctctctcccgttgccca-ggctggagtgcagtggcac---aatcatagctcaccgcag--ccttgacttcccaggctcaggtgcttttcct-acctcagcctcct----gagtagctggacttcaggcacgcaccaccccac--ccagctaatttttgtatttttggtagagaccgggttt-taccctgttgcccaggctg--gtctt-gaactcctgggctcaagccatcctctcacttcggcctccc--aaagtactgagattgtaggt-atg-agcc--accatgcctggcctgatttgcattttcctaatgattagtgatTG--TTCTAACAG------------------TTTTTGtttgtttgtttgtttgttttttagtggactcttcagggtttcctacattaaatgtgtaatctgagaagagagataattt-tatgtgtttttttttccaatttagatgctttttatttctttttcttacctgcttgctccagtt-aggacttccagtactatgttgaatagaagtggcaaaagcaggcatctttattcttgt-ttgtga--tcctaga-ccttttggtctttaaccatttaacatgttagctgtaagctttacat--atatggcctttattatattgaggtagttctcttttatttctagtttgctgggtactttttatcatgaaaatatgt-tgaattttgtcaaacgttctttctgaatcaattgagatgatcatgtggttttgtgt----------ttaattctatttatgtggagaaatgc------------attttttttttc s panTro5.chr5 5248629 1358 - 181907262 tccccttccctcagcctctggcaaccactattctactttctgttattatgaattagactattctagaaatctcatataagtgaaattatacagcatttctgtttttgtaactggcttatttcactttgcaaaatgtgttcaaagttcaaacttatgttgtagcatgtgtcagac-----tttctttttaaagctgaataatattctattatatgtatttatcacatcttgtttacccattcatctgtcactgaacacttggatttcttccatcttttccctattgtgaataatgctgctgtgaacatgggcatatggcgatctccttgagaccctgcttttcaattctttttgggtctataccccaaaacagaattgctttatcatatggtaattctatttttaactttttgggaaactgccatactgttttccaatgtgacttcaccattttccattcccaccaatagtgcacaatggtttcaatttctatacacccttgccaacactttttattt--tctg-tttattttttaaatagtagccatcataatgggtatgaagtagcatctcattatcatttcaattttaatttttgctttttttttttttt-----gagacagggtctctctctcgttgccca-ggctggagtgcagtggcac---aaacatagctcaccgcag--ccttgacttcccaggctcaggtgcttttcct-acctcagcctcct----gagtagctggacttcaggcacgcaccaccccac--ccagctaatttttgtatttttggtagagaccaggttt-taccctgttgcccaggctg--gtctt-gaactcctgggctcaagccatcctctcaccttggcctccc--aaagtactgagattgtaggt-atg-agcc--accatgcgtggactgatttgcattttcctaatgattagtgattg--ttctaacag------------------tttttgtttgtttgtttgtttgttttttagtggactcttcagggtttcctacattaaatgtgtaatatgagaagagagataattt-tatgt-tttttttttccaatttagatgctttttatttctttttcttacctgcttgctccagtt-aggacttccagtactatgttgaacagaagtggcaaaagcaggcatctttattcttgt-ttgtga--tcctaga-gcttttggtctttaaccatttaacatgttagctgtaggctttacat--atatggcctttattatattgaggtagttctcttttatttctagtttgctgggtactttttatcatgaaaatatgt-tgaattttgtcaaacgttctttctgaatcaattgagatgatcatgtggttttgtgt----------ttaattctatttatgtggagatatgc------------attttttttttt i panTro5.chr5 N 0 C 0 s panPan2.chr5 5511030 1354 - 183735486 tccccttccctcagcctctggcaaccactattctactttctgtttctatgaattagactattctagaaatctcatataagtggaattatacagcatttctgtttttgtaactggcttatttcactttgcaaaatgtgttcaaagttcaaactcatgttgtagcatgtgtcagaa-----tttctttttaaagctgaataatattctattatatgtatttatcacatcttgtttacccattcatctgtcactgaacacttggatttcttccatcttttccctattgtgaataatgctgctgtgaacatgggcatatggcgatctccttgagaccctgcttttcaattctttttgggtctataccccaaaacagaattgctttatcatatggtaattctatttttaactttttgggaaactgccatactgttttccaatgtgacttcaccattttccattcccaccaatagtgcacaatggtttcaatttctatacacccttgccaacactttttattt--tctg-tttattttttaaatagtagccatcataatgggtatgaagtagcatctcattatcatttcaattttaatttttgattttttttttgt--------agacagggtctctctctcgttgccca-ggctggagtgcagtggcac---aaacatagctcaccgcag--ccttgacttcccaggctcaggtgcttttcct-acctcagcctcct----gagtagctggacttcaggcacgcaccaccccac--ccagctaatttttgtatttttggtagagaccaggttt-taccctgttgcccaggctg--gtctt-gaactcctgggctcaagccatcctctcaccttggcctccc--aaaatactgagattgtaggt-atg-agcc--accatgcgtggcctgatttgcattttcctaatgattagtgattg--ttctaacag------------------tttttgtttgtttgtttgtttgttttttagtggactcttcagggtttcctacattaaatgtgtaatatgagaagagagataattt-tatg--tttttttttccaatttagatgctttttatttctttttcttacctgcttgctccagtt-aggacttccagtactatgttgaacagaagtggcaaaagcaggcatctttattcttgt-ttgtga--tcctaga-gcttttggtctttaaccatttaacatgttagctgtaggctttacat--atatggcctttattatattgaggtagttctcttttatttctagtttgctgggtactttttatcatgaaaatatgt-tgaattttgtcaaacgttctttctgaatcaattgagatgatcatgtggttttgtgt----------ttaattctatttatgtggagatatgc------------atattttttttt i panPan2.chr5 N 0 C 0 s gorGor5.CYUI01015413v1 1608602 1358 + 3967317 tccccttccctcagcctctggcaaccactattctactttctgtttctatgaattagactattctagaaatctcatataagtggaattatacagcatttctgtttttgtaactggcttatttcactttgcaaaatgtgttcaaagttcaaactcatgttgtagcatgtgtcagaa-----tttctttttaaagctgaataatattctattatatgtatttatcacatgttgtttacccattcgtctgtcactgaacacttggatttcttccatcttttccctattgtgaataatgctgctgtgaacatgggtagatggcgatctccttgagaccctgcttttcaattctttttgggtctataccccaaaacagaattgctttatcatatggtaattctatttttaactttttgggaaactgccatactgttttccaatgtgacttcaccattttccattcccaccaatagtgcacaatggtttcaatttctacacacccttgccaacactttttattt--tctg--ttattttttaaatagtagccatcataatgggtatgaagtagcatctcattatcatttcaattttaatttttgctttttttttttttt--tttgagacagggtctctctctcgttgccca-ggctggagtgcagtggcac---aatcatagctcaccgcag--ccttgacttcccaggctcaggtgcttttcct-acctcagcctcct----gagtagctggacttcaggcatgcaccactccac--ccagctaatttttgtatttttggtagagaccgggttt-taccctgttgcccaggctg--gtctt-gaactcctgggctcaagccatcctctcacctcggcctccc--aaagtactgagattgtaggt-atg-agcc--accatgcctggcctgatttgcattttcctaatgattagtgattg--ttctaacag------------------tttttgtttgtttgtttgtttgttttttagtggactcttcagggtttcctacattaaatgtgtaatctgagaagagagataattt-tatg--tttttttttccaatttagatgctttttatttctttttcttacctgcttgctccagtt-aggacttccagtactatgttgaatagaagtggcaaaagcaggcatctttattcttgt-ttgtga--tcctaga-gcttttggtctttaaccatttaacatgttagctgtaggctttacat--atatggcctttattatgttgaggtagttctcttgtatttctagtttgctgggtactttttatcatgaaaatatgt-tgaattttgtcaaacgttctttctgaatcaattgagatgatcatgtggttttatgc----------ttaattctatttatgtggagaaatgc-------------ttttttttttt i gorGor5.CYUI01015413v1 N 0 C 0 s chlSab2.chr23 4700362 1384 - 82825804 tccccttccctcagcctctggcaaccactaatctactttctgtttctatgaataagactgttctagaaatctcatataagtggaattatacagcatttcggttttcataactggcttatttcactttgcaaaatgtgttcaaagttcaaactcacgttgtagcatgcatcagaatttcctttctttttaaagctgaataatattctattatatgtatttatcacatcttgcttacccattcatctgtcactaaacacttggatttcttccatcttttcgccattgtgaataatgctactatgaacgtgtgtatatgccgatctccttgagaccctgattttcaattctttttgggtctataccccaaaatagaattgttttatcatatggtaattctatttttaactttttgggaaacagccatactgttttccaatgtgactgcaccattttccattcccaccaatagggcacagtggtttcaatttctatacacccttgccaacattttttattttgtt---tttttttttttaatagtagccatcataatgggtatgaaatagtatctcattatcatttcaattttaatttttgctttttttttctttt---ttgagacagggtctctctctcgttgccca-ggctggagtgcagtggcat---gatcatagtttactgcag--ccttgacttcccaggctcgggtgcttttcct-gcctcagcctcct----gagtagctagacttcaggcacacaccaccccac--ccagctactttttatattttttgtggagaccaggttt-taccctgttgtccaggctg--gtctt-gaactcctgggctcaagccagtctctcacctcggcctccc--aaagtgctgagattgtaggt-atg-agcc--accatgtctggcctgatttgcatttttgtaataattagtgatTG--TTCTCACAG-----------gtttgtttgtttgtttgtttgtttgtttgtttttttgtggactcttcagggtttcctacataaaatatatcgtctgaggagagagataattt-tatgt-tttttttttccaatttagatgctttatatttctttttcttgcctgcttgctccagtt-aggacttccagtactatgttgaatagaagtggcaaaagcagggatctttattcttgt-ttgtga--tcctaga-gcttttagtctttaatcatttaacatgttagctgtaggctttacat--atatggcctttattatattgaggtagttctcttttatttctagtttgctgggtactttttatcatgaaaatatgt-tgaattttgtcaaatgttctttctgaatcaattgagatgatcttgtggttttgtac----------ttaattctgtttatgtggagaaatgctttttttttttttttttttttttt i chlSab2.chr23 N 0 C 0 s manLeu1.NW_012103943v1 195650 1356 + 2521317 tccctttccctcagcctctggcaaccactaatctactttctgtttctatgaattagactgttctagaaatctcatataagtggaattatacagcatttcggtttttgtaactggcttatttcactttgcaaaatgtgttcaaagttcaaactcatgttgtagcatgcatcagaatttcctttctttttaaagctgaataatattctattatatgtatttatcacatcttgcttacccattcatctgtcactaaacacttggatttcttccatctttttgccattgtgaataatgctactatgaacgtgtgtatatgccgatctccttgagaccctgattttcaattctttttgggtctatgccccaaaatagaattgttttatcatatggtaattctatttttaactttttgggaaacagccatactgttttccaatgtgactgcaccattttccattcccaccaatagggcatagtggtttcaatttctatacacccttgccaacattttttattt--tc---tatttttttttaatagtagccatcataatgggtatgaaatagtatctgattatcatttcaattttaatttttgctttttttttctttt---ttgagacagggtctctctctcgttgccca-ggctggagtgcagtggtat---gatcatagttcactgcag--ccttgacttcccaggctcaggtgcttttcct-gcctcagcctcct----gagtagctagacttcagacacacaccaccccac--ccagctactttttgtattttttgtggataccgggttt-taccctgttgcccaggctg--gtctt-gaactcctgggctcaagccagtctctcacctcggcctccc--aaagtgctgagattgtaggt-atg-agcc--accacgtctggcctgatttgcatttttgtaataattagtgattg--ttctaacag-----------------------gttggtttttttttttttttttttgtggactcttcagggtttcctacataaaatatattgtctgagaagagagataattt-tatg---ttttttttccaatttagatgctttatatttctttttcttgcctgcttgctccagtt-aggacttccagcactatgttgaatagaagtggcaaaagcagggatctttattcttgt-ttgtga--tcctaga-gcttttagtctttaatcatttaacatgttagctgtaggctttacat--atatggcctttattatattgaggtagttctcttttatttctagtttgctgggtactttttatcatgaaaatatgt-tgaattttgtcaaatgttctttctgaatcaattgagatgatcttgtggttttgtat----------ttaattctgtttatgtggagaaatgc------------tttttttttttt i manLeu1.NW_012103943v1 N 0 C 0 s colAng1.NW_012115755v1 1686353 1341 - 2415367 tccccttccctcagcctctggcaaccactaatctactttctgtttctatgaattagactgttctaaaaatctcatataagtggaattatacagcatttctgttttcgtaactggctcatttcactttgcaaaatgtgttcaaagttcaaactcatgttgtagcatgcatcagaatttcctttctttttaaagctgaataatattctattatatgtatttatcacatcttgcttacccattcatctgtcactaaacacttggatttcttccatcttttcgccattgtgaataatgctactatgaacatgtgtatatgccgatctccttgagaccctgattttcaattctttttgggtctataccctaaaacagaattgttttatcatatggtaattctatttttaactttttgggaaatagccatactgttttccaatgtgaccacaccattttccattcccac--------cacagtggtttcaatttctatacacccttgccaacatttttcattt--tctggtttttttttttaatagtagccatcataatgggtatgaaatagtatctcattatcatttcaattttaatttttgctttttttttctttt---ttgagacagggtctctctctcgttgccca-ggctggagtgcagtggcat---gatcatagttcactgcag--ccttgacttcccaggctcaggtgcttttcct-gcttcagcctcct----gagtcgctagacttcaggcacacatcaccccac--ccagctacattttgtattttttgtggagaccgtgttt-taccctgttgcccaggctg--gtctt-gaacccctgggctcaagccagtctctcaccttggcctccc--aaagtgctgagattgtaggt-atg-agcc--accatgcctggcctgatttgcatttttgtaatgattagtgatTG--TTCTAACAG----------------------------TTTTTTTTTTTTTttttttgtggactcttcagggtttcctacataaaatatgtcatctgagaagagagataattt-tatg----tttttttccaatttagatgctttatatttctttttcttgcctgcttgctccagtt-aggacttccagtactatgttgaatagaagtggcaaaagcagggatctttgttcttgt-ttgtga--tcctaga-gcttttagtctttaaccatttaacatgttagctgtaggctttacat--atatggcctttattatattgaggtagttctcttttatttctagtttgctgggtactttttatcgtgaaaatatgt-tgaattttgtcaaatgttctttctgaatcaattgagatgatcttgtggttttgtat----------ttaattctgtttatgtggagaaatgc----------------attttttt i colAng1.NW_012115755v1 N 0 C 0 s aotNan1.NW_018501968v1 1092610 1415 - 2246441 tccccttccctcagcctctggcaaccaccattctactttctgtttctatgaattagactattctagaaatttcgtataagtggaactattcagtatttctgtttttgtaactggcttatttcactttgcaaaatgtgttcaaggttcaaactcgtgttgcagcatgagtcagaatttc-tttcttttttaagctgaataatattctattctgtgtatttatcacatcttgcttacccattcatctgtcacgaaacacttggctttcttccatctttttgctattgtgaataatgctgctgtgaacacgggcatatggtgatctctttgagaccctgcttttcaattctttttgggtctataccctaaaatagaattgctttatcatatggtaattctatttttaactttttgagaaactgctatactgttttccaatgtgactgcaccatttttaattcccaccaaaagtgcaccatggtttcaatttctatacatccttgtcaacactttttattt--tc---tgttttttttaaatagtagctatcatagtagggatgaagtagtatctcattatcattt-aatttTAAttttccttttttttttttttggttgtaaggcagggtctct-tcttattgcccagggctggag-gcagtggcaacaggagcatagctcattgcagccccttgacttccc-ggctcaagtgcttttcttcaacctagcctcctttccgggta-ctggacttcaggcgcgaaccacccggctgccagctaagttgt-tgtttttgtgagagacagggttcgtgccatgttgcccaggctggagtctcaaaactcctggtctcaagtcatctcttttcctcggcctccccaaaagtgctgagattatagATGATGCAGTCCAACCATCGCTGGCCTGATTTGCATCTTTCCAATGA-TAGTGATTGGATTCTAAAAACAGttttttttttttttttgtttgttttttttttttttttttttttagtggactcttcagggttccctacat-aaatatgtcatctaagaagagagagaatttgtatattttttgttttacaatgtagaggcttt-tatttatttttctgcgctgcttgtccacgttgaggacttccagtactgtgttgaatagaagt-gcgaaagcaggc-tcttaattcttgtattatgaatgcctagaggcttttggtgtttaaccatttaaaatgttagctgtaggctttatgtggatatgg-cttcaatatattgaggtagtt-gctttgatttctaatttgctatgtacttttcgtcatgaaaatatgtgtgaattttgtcaactatgccttctgaatcaattgaggtgatcatgtggttttgcacttaattggtattaattctgtttatgtggaaaaaaaa------------attttttttttt i aotNan1.NW_018501968v1 N 0 I 43 a score=56351.000000 s hg38.chr5_KI270795v1_alt 1362 36 + 131892 --gagatgggagtctcactctgtgactcaggctggagt s panTro5.chr5 5249987 38 - 181907262 ttgagatgagagtctcactctgtgactcaggctggagt i panTro5.chr5 C 0 C 0 s panPan2.chr5 5512384 38 - 183735486 tcgagatgagagtctcactctgtgactcaggctggagt i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1609960 38 + 3967317 tcgagatgggagtctcactctgtgactcaggctggagt i gorGor5.CYUI01015413v1 C 0 C 0 s chlSab2.chr23 4701746 37 - 82825804 ttgagatggca-tctcactctgtcacgcaggctggagt i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 197006 37 + 2521317 ttgagatggca-tctcactctgtcacacaggctggagt i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1687694 37 - 2415367 ttgagatggca-tctcactctgtcatgcgggctggagt i colAng1.NW_012115755v1 C 0 C 0 e aotNan1.NW_018501968v1 1094025 43 - 2246441 I a score=113975.000000 s hg38.chr5_KI270795v1_alt 1398 54 + 131892 gcactggcgcgatctcaattcactgcaacctccatctcctgga-ttcagattctc s panTro5.chr5 5250025 54 - 181907262 gcactggtgcgatctcagttcactgcaaccttcatctcctgga-ttcagattctc i panTro5.chr5 C 0 C 0 s panPan2.chr5 5512422 54 - 183735486 gcactggcgcgatctcagttcactgcaaccttcatctcctgga-ttcagattctc i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1609998 54 + 3967317 gcactggcgcgatctcagttcactgcaacctccatctcctgga-ttcagattctc i gorGor5.CYUI01015413v1 C 0 C 0 s chlSab2.chr23 4701783 54 - 82825804 gcattggcacgatctcagctcactgcagcctccatctcctagg-ttcagattatc i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 197043 54 + 2521317 gcattggcacgatctcagctcactgcagcctccgtctcctagg-ttcagattatc i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1687731 54 - 2415367 gcattggcacgatttcagctcactgcagcctccgtctcctagg-ttcagattatc i colAng1.NW_012115755v1 C 0 C 0 s aotNan1.NW_018501968v1 1094068 55 - 2246441 gcagtggtgtgatcttggctcactgcaacctccgcctcccggagttcagactctc i aotNan1.NW_018501968v1 I 43 I 107 a score=185223.000000 s hg38.chr5_KI270795v1_alt 1452 104 + 131892 gtgcctcagcctctcgagtagctgggattacaggtgcccgccatcactcccggctaatttttgtgtttttagtagagacagggtttcaccatgttggccaggct s panTro5.chr5 5250079 104 - 181907262 ctgcctcagcctctcgagtagctgggattacaggtgcccgccatcactcccggctaatttttgcgtttttagtagagacagggtttcaccatgttggccaggct i panTro5.chr5 C 0 C 0 s panPan2.chr5 5512476 104 - 183735486 ctgcctcagcctctcgagtagctgggattacaggtgcccgccatcactcccggctaatttttgcgtttttagtagagacagggtttcaccatgttggccaggct i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1610052 104 + 3967317 ctgcctcagcctctcgagtagctgggattacaggtgcccgccatcactcccggctaatttttgtgtttttagtagagacagggtttcaccatgttggccaggct i gorGor5.CYUI01015413v1 C 0 C 0 s chlSab2.chr23 4701837 104 - 82825804 ctgcctcagcctcctgagtagctgggattacaggcacctgccaccacgcccagctaatttttgtatttttagtagagacggggtttcaacatgttggccaggct i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 197097 104 + 2521317 ctgcctcagcctcctgagtagctgggattacaggcacctgccaccacgcccagctaatttttgtatttttagtagagatggggtttcaacatgttggccaggct i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1687785 104 - 2415367 ctgcctcagcctcccgagtagctgggattacaggcacctgccaccatgcccagctaatttttgtatttttggtagagacagggtttcaacatgttggtcaggct i colAng1.NW_012115755v1 C 0 C 0 e aotNan1.NW_018501968v1 1094123 107 - 2246441 I a score=2346839.000000 s hg38.chr5_KI270795v1_alt 1556 1038 + 131892 ggtctcaaactc-ctgacct---caggtgatccgcccaccttggcctcccaaagcgttgggattacaggcatgagccactgcacctggccgcattcattgttttttgtatgttaaatcatccttgcattccagaaataaatcccacttggtcgtggtatgtagtaattttaaagcattgttgaattctgttggctagtattttgttaaggattttcacttcagtgtttaccagggatactggtctgtgtggttttcttttcttgtagtgtatttgtttggcttttatattagggtaatgctggccttatagaataagtggggggtgtcctctcttcagtctttttaacagtttaggaggattgctgttaatttttctataaatgtttggtagaatttactagtgaaaccatcttattctagggttttgttttttttttt--------------ttt-ggttgttgttgaaaggtttttggctatagattcaatctccttattaattgtagtctattccagttttctgtttctccagattcactcttggtagattgtgtatttctaggattttattcatttcatctagttatctaatttttcatcatataggtattcacattactagcttatgatcc-tttttatttctgtaaaagcagcagcaatatctcctttcatttctgattttagttatttgagacttctctcttattttcttagtcagttggcagttttgctgatcttatggaagaaccaactcttgtttt-ttaattttaaaagttgttttctattctctattttgttgatctttgctcaaatcttcattatttcttttcctctgcgaggtttcagtttcattttttatttttctagttccttaaggtgtaaagttacattgttgatttgggttcttatttggtatgcaagcaattacagctgtaaatttcctttttagtactatgtttgctgcatcccacacattttggtacatt-tgtttttattttcatttgtctgaagatattttctaatttcccttgtga-tttttttcttttgacccat s panTro5.chr5 5250183 1039 - 181907262 ggtctcaaactc-ctgacct---caggcgatccgcccaccttggcctcccaaagcgttgggattacaggcatgagccactgcacctggccgcattcattgtgttctgtatgttaaatcattcttgcattccagaaataaatcccacttggtcgtggtatgtagtaattttaaagcattgttgaattctgttggctagtattttgttaaggattttcacttcagtgtttaccagggatactggtctgtgtggttttcttttcttgtagtgtatttgtttggcttttatattagggtaatgctggccttatagaataagtggggggtgtcctctcttcagtctttttaacagtttaggaggattgctgttaatttttctataaatgtttggtagaacttactagtgaaaccatcttgttctagggtttttttttttttttt--------------ttttggttgctgttgaaaggtttttggctatagattcaatctccttattaattgtggtctattccagttttctgtttctccagattcactcttggtagattgtgtatttctaggattttattcatttcatccagttatctaatttttcatcatataggtattcacattactagcttatgatcc-tttttatttctgtaaaagcagcagcaatgtctcctttcatttctgattttagttatttgagacttctctcttattttcttagtcagttggaggttttgctgatcttatggaagaaccaactcttgtttt-ttaattttaaaagttgttttctattctctattttgttgatctctgctcaaatcttcattatttcttttcctctgcgaggtttcagtttcatttgttatttttctagttccttaaggtgtaaagttacattgttgatttgggttcttatttggtatgcaagcaattacagctgtaaatttcctttttagtactatgtttgctgcatcccacacattttggtacatt-tgtttttattttcatttgtctgaagatattttctaatttcccttgtga-tttttttcttttgacccat i panTro5.chr5 C 0 I 5 s panPan2.chr5 5512580 1029 - 183735486 ggtctcaaactc-ctgacct---caggtgatccgcccaccttggcctcccaaagcgttgggattacaggcatgagccactgcacctggccgcattcattgtgttctgtatgttaaatcatccttgcattccagaaataaatcccacttggtcgtggtatgtagtaattttaaagcattgttgaattctgttggctagtattttgttaaggattttcacttcagtgtttaccagggatactggtctgtgtggttttcttttcttgtagtgtatttgtttggcttttatattagggtaatgctggccttatagaataagtggggggtgtcctctcttcagtctttttaacagtttaggaggattgctgttaatttttctataaatgtttggtagaacttactagtgaaaccatcttgttctagggtttttttttt------------------------ggttgttgttgaaaggtttttggctatagattcaatctccttattaattgtggtctattccagttttctgtttctccagattcactcttggtagattgtgtatttctaggattttattcacttcatccagttatctaatttttcatcatataggtgttcacattactagcttatgatcc-tttttatttctgtaaaagcagcagcaatgtctcctttcatttctgattttagttatttgagacttctctcttattttcttagtcagttggcagttttgctgatcttatggaagaaccaactcttgtttt-ttaattttaaaagttgttttctattctctattttgttgatctctgctcaaatcttcattatttcttttcctctgcgaggtttcagtttcatttgttatttttctagttccttaaggtgtaaagttacattgttgatttgggttcttatttggtatgcaagcaattacagctgtaaatttcctttttagtactatgtttgctgcatcccacacattttggtacatt-tgtttttattttcatttgtctgaagatattttctaatttcccttgtga-tttttttcttttgacccat i panPan2.chr5 C 0 I 5 s gorGor5.CYUI01015413v1 1610156 1035 + 3967317 ggtctcaaactc-ctgacct---caggtgatccgcccaccttggcctcccaaagcgttgggattacaggcatgagccactgcacctggccgcattcattgttttttgtatgttaaatcatccttgcattccagaaataaatcccacttggtcgtggtatgtagtaattttaaagcattgttgaattctgttggctagtattttgttaaggattttcacttcagtgtttaccagggatactggtctgtgtggttttcttttcttgtagtgtatttgtttggcttttatattagggtaatgctggccttatagaataagtggggggtgtcctctcttcagtctttttaacagtttaggaggattgctgttaatttttctataaatgtttggtagaatttactagtgaaaccatcttgttctagggtttttttttttttttt------------------ggttgttgttgaaaggtttttggctatagattcaatctccttattaattgtagtctattccagttttctgtttctccagattcactcttggtagattgtgtatttctaggattttattcatttcatctagttatctaatttttcatcatataggtattcacattactagcttatgatcc-tttttatttctgtaaaagcagcagcaatgtctcctttcatttctgattttagttatttcagacttctctcttattttcttagtcagttggcagttttgctgatcttatggaagaaccaactcttgtttt-ttaattttaaaagttgttttctattctctattttgttgatctctgctcaaatcttcattatttcttttcctctgcgaggtttcagtttcatttgttatttttctagttccttaaggtgtaaagttacattgttgatttgggttcttatttggtatgcaagcaattacagctgtaaatttcctttttagtactatgtttgctgcatcccacacattttggtacatt-tgtttttattttcatttgtctgaagatattttctaatttcccttgtga-tttttttcttttgacccat i gorGor5.CYUI01015413v1 C 0 C 0 s chlSab2.chr23 4701941 1049 - 82825804 ggtctcaaactc-ctgacct---caggtgatctgcctgccttggcctcccaaagtgttgggattacaggcatgagccaccgcacctggccacattggttgttttttgtatgttaaatcatccttgcattccagaaataaatcccacttggttgtgatatatagtaattttaaagtattgttgaattctgttggctagtatttcgttgaggattttcacttcagtgtttatcagggatgctggtc--tgtggttttctttccttgtagtgtatttgtttgactttggtattagggtaatgctggccttatagagtaagtgggaggtgtcctctctttggtctttttaacagtttaggaggattgctgttcatttttccataaatgtttggtagaatttactagtgaaaccatcttgttctagggttttgttttatgttttttgttgttgttgttttttggttgttgttgaaaggtttttggttatagattcaatctccttattaattgtagtctattcaagttttctgtttgtccagattcactcttggtagattgtatatttctaggattttattcacttcatccagttatctaatttttcatcatgtaagtattcacattactatcttatgatccttttttatttctgtaaaagcagcagcagtgtctcctttcatttctgatttttattatttgagtcttctctctcattttctt----agttggcagttttgctgatcttatggaagaaccaactcttgttttattaattttaaaagttgttttctattctctattttgttgatctctgctcaaatcttcattatttcttttcctctgctaggtttcagtttcatttgttatttttctagtttcttaaggcataaagttacattattgatttgggttcttattttttatgcaagcaattacagctgtaaatttcctttttagtactatgtttgctgcatcccacacattttggtacatt-tgtttttatttttatttatctcaagatatgttctaatttcccttgtga-tttttttattttgagccat i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 197201 1049 + 2521317 ggtctcaaactc-ctgacct---caggtgatctgcctgccttggcctcccaaagtgttgggattacaggcatgagccaccgcacctggccacattggtggttttttgtatgttaaatcatccttgcattccagaaataaatcccacttggttgtgatatatagtaattttaaagtattgttgaattctgttggctagtattttgttgaggattttcacttcagtgtttatcagggatgctggtc--tgtggttttctttccttgtagtgtatttgtttgactttggtattagggtaatgctggccttatagagtaagtgggaggtgtcctctcttcagtctttttaacagtttaggaggattgctgttaatttttccataaatgttcggtagaatttactagtgaaaccatcttgttctagggttttgttttatgttttttgttgttgttgttttttggttgttgttgaaaggtttttggttatagattcaatctccttattaattgtagtctattcaagttttctgtttgtccagattcactcttggtagattgtatatttctaggattttattcacttcatccagttatctaatttttcatcatgtaagtattcacattactatcttatgatccttttttatttctgtaaaagcagcagcagtgtctcctttcatttctgattttaattatttgagtcttctctctcattttctt----agttggcagttttgctgatcttatggaagaaccaactcttgttttattaattttaaaagttgttttttattctctattttgttgatctctgctcaaatcttcattatttcttttcctctgctaggtttcagtttcatttgttatttttctagttccttaaggcataaagttacattattgatttgggttcttattttttatgcaagcaattacagctgtaaatttcctttttagtactatgtttgctgcatcccacacattttggtacatt-tatttttatttttatttgtctcaagatatgttctaatttcccttgtga-tttttttattttgagccat i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1687889 1046 - 2415367 ggtctcaaactc-ctgacct---caggtgatctgcctgccttggcctcccaaagtgttgggattacaggcatgagccactgcacctggccacactggttgttttttgtatgttaaatcatccttgcattccagaaataaatcccacttggttgtggtatatagtaattttaaagcattgttaaattctgttggctagtattttattgaggattttcacttcagtgtttatcagggatgctggtc--tgtggttttctttccttgtagtgtattggtttgactttggtattagggtaatgctggccttacagagtaagtgggaggtgtcctctcttcggtctttttaacagtttaggaggattgctgttaatttttccataaatgtttggtagaatttactagtgaagccatcttgttctagggttttgttttatgttttttgttg--------ttttggttgttgttgaaaggtttttggttatagattcaatctccttattaattgtagtctattcaagttttctgtttgtctagattcactcttggtagattgtatatttctaggattttattcacttcatctagttatctaatttttcatcatgtaagtattcacattactatctcatgatccttttttatttctgtaaaagcagcagcaatgtctcctttcatttctgattttagttatttgagtcttctctctcattttcttagtcagttggcagttttgctgatcttatggaagaaccaactcttgttttattaattttaaaagttgttttctattctctgttttgttgatctcttctcaaatcttcattatttcttttcctctgctaggtttcagtttcatttgttatttttctagttccttaaggtataaagtcacattattgatttgggttcttattttttatgcaagcaattacagctgcaaatttcctttttagtactatgtttgctgcatcccacacattttggtgcatt-tgtttttatttttatttgtctcaagatattttctaatttcccttgtggttttttttcttttgagccat i colAng1.NW_012115755v1 C 0 C 0 s aotNan1.NW_018501968v1 1094230 951 - 2246441 agtctcgaactctctgacctcaacaggtg-tccggctgccttggcttcccaaagtgctgggattacaggtgtgagccaccgggaacggacacattaattgttttttgtatgctaaatcatccttgcattccagaaaggaatctcacttggtcatggtatgtagtaattttaaagcattgttgaattctgttggctaatattttgttgaggattttcacgtcagtgtttatcagggatactggtc--tgtagttttcttttcttgtagtgtcttcgtttggctttggtattggggtaatgctggcattatagaataagtgggaagtgacctctcgtcagtcttttgaacagttcagggggattgctgttaatttttct-----------gtagaattttctagtgaaaccatcttgttctagggtt-------------------------------------------------------------------------------------tctgttcaagttttctgtttctccagattcactcttggtaaattgtgtatttctaggattttattaatttcatctagttatcttatttttcatcatgtaagtattcacattactgtcttatgatcc-tttttatttctgtaaaagcagcagcaatgtctccttcaacttctgattttagttatttgagtcttctc----gttttcttagtcagttggcagttttgctgatcttatggaagaaccaactcctgttttattaattttaaaaattgttttttattctctattttgttgatctctgctcaaatctttattatttcttcttctctgctaggtttcagtttcatttgttcttcttctagttccttaaggtataaagttacattattgatttgggttcttatgtgttatataagcaattacagctgtacattt-atttttagtactgtgtttgctgcatcccacacattttagtacattgtgttt---ttttcatttgtctcaagatattttctaatttcccttgtga--ttttttcttttgatccat i aotNan1.NW_018501968v1 I 107 C 0 a score=8450.000000 s hg38.chr5_KI270795v1_alt 2594 8 + 131892 tgttattt s gorGor5.CYUI01015413v1 1611191 7 + 3967317 tgttatt- i gorGor5.CYUI01015413v1 C 0 C 0 s chlSab2.chr23 4702990 8 - 82825804 tgttattt i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 198250 8 + 2521317 tgttattt i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1688935 8 - 2415367 tgttattt i colAng1.NW_012115755v1 C 0 C 0 s aotNan1.NW_018501968v1 1095181 8 - 2246441 tgttattt i aotNan1.NW_018501968v1 C 0 C 0 e panPan2.chr5 5513609 5 - 183735486 I e panTro5.chr5 5251222 5 - 181907262 I a score=1910997.000000 s hg38.chr5_KI270795v1_alt 2602 806 + 131892 gagagtgtAttgttttgttctctcttttgttttctttagagatgagctcttgctccatcatccaagttggagtgcagtggcatgatcaaagctcactgcagcctcaaatgcctgggctcaagtgatccttccacttcagcctcctgagtatctgggattaaggaatgtgttgtttaattttcatgtatttgtggatttttcagcacaacttttgctattggtttctttccattgtgattggaaacaatattttgtatgattttaatcttttaaaattcattaagacttgttttgtggcctaacacatcctctatcctggagaatgtttcataatgcacttt-aaaaaaagtatattctattgttaggtggattgtgttgtttatgtctgttagggccatttcgtctatagtgttgttcaagttcttgtatttccttattgatcttctgtctagttgttctatccgttattgaaagggtagtactgaagtctcctacta-ttttttcaagttgtctatttctgtcttcaattctgtcaatgtttgctatgtatatttaggctctaatatttattgcataaatgtttttaattgttatatcttcttggtgaattgaccctttcaccattatataatattctc--ctgtttcttgtaacagttttatttttacttagtgtctattttTAggctgggagtggtggctcacgcctgtaatcccacactttgggaggccaaggcaggtggatcacctgaggtcaagagttcgagaccaacctggccaacatggcaaaaccccttctctactaaaaa s panTro5.chr5 5251227 806 - 181907262 aagagtgtattgttttgttctctcttttgttttctttagagatgagctcttgctccatcatccaagttggagtgcagtggcatgatcaaagctcactgcagcctcaaatgcctgggctcaagtgatccttccacttcagcctcctgagtatctgggattaaggaatgtgttgtttaattttcatgtatttgtggatttttcagcacaacttttgctgttggtttctttccattgtgattggaaacaatattttgtatgattttaatcttttaaaattcattaagacttgttttgtggcctaacacatcctctatcctggagaatgtttcataatgcacttt-aaaaaaaatatattctattgttaggtggattgtgatgtttatgtctgttagggccatttcatctatagtgttgttcaagttcttgtatttccttattgatcttctgtctagttgttctatctgttattgaaaggatagtactgaagtctcctacta-ttttttcaagttgtctatttctgtcttcaattctgtcaatgtttgctatgtatatttagactctaatatttattgcataaatgtttttaattgttatatcttcttggtgaattgaccctttcaccattatataatattctc--ctgtttcttgtaacagttttATTTTTACTTAGTGTCTATTTTTAggctaggagtggtggctcatgcctgtaatcccacactttgggaggccaaggcaggtggatcacctgaggtcaagagttcgagaccaacctggccaacatggcaaaaccccttctctactaaaaa i panTro5.chr5 I 5 C 0 s panPan2.chr5 5513614 806 - 183735486 aagagtgtattgttttgttctctcttttgttttctttagagatgagctcttgctccatcatccaagttggagtgcagtggcatgatcaaagctcactgcagcctcaaatgcctgggctcaagtgatccttccacttcagcctcctgagtatctgggattaaggaatgtgttgtttaattttcatgtatttgtggatttttcagcacaacttttgctgttggtttctttccattgtgattggaaacaatattttgtatgattttaatcttttaaaattcattaagacttgttttgtggcctaacacatcctctatcctggagaatgtttcataatgcacttt-aaaaaaagtatattctattgttaggtggattgtgttgtttatgtctgttagggccatttcatctatagtgttgttcaagttcttgtatttccttattgatcttctgtctagttgttctatctgttattgaaaggatagtactgaagtctcctacta-ttttttcaagttgtctatttctgtcttcaattctgtcaatgtttgctatgtatatttagactctaatatttattgcataaatgtttttaattgttatatcttcttggtgaattgaccctttcaccattatataatattctc--ctgtttcttgtaacagttttatttttacttagtgtctattttTAggctaggagtggtggctcatgcctgtaatcccacactttgggaggccaaggcaggtggatcacctgaggtcaagagttcgagaccaacctggccaacatggcaaaaccccttctctactaaaaa i panPan2.chr5 I 5 C 0 s gorGor5.CYUI01015413v1 1611198 803 + 3967317 gtgagtgtattgttttgttctctcttttgttttctttagagatgagctcttgctccatcatccaagttggagtgcagtggcatgatcaaagctcactgcagcctcaaatgcctgggctcaagtgatccttccacttcagcctcctgagtatctgggattaaggaatgtgttgtttaatttttatgtatttgtggatttttcagcacaactgttgctattggtttctttccattgtgattggaaacaatattttgtatgattttaatcttttaaaattcattaagacttgttttgtggcctaacacatcctctatcctggagaatgtttcat-atgcacttt-aaaaaaagtatattctattgttaggtggattgtgttgtttatgtctgttagggccatttcgtctatagtgttgttcaagttcttatatttccttatggatcttctgtctagttgttctatccgttattgaaagggtagtactgaagtctcctacta-ttttttcaagttgtctatttctgtcttcaattctgtca--gtttgctatgtatatttaggctctaatatttattgcataaatgtttttaattgttatatcttcttggtgaattgaccctttcaccattatataatattctc--ctgtttcttgtaacagttttatttttacttagtgtctgttttTAggctgggagtggtggctcacgcctgtaatcccacactttgggaggccaaggcaggtggatcacctgaggtcaagagttcgagaccaacctggccaacatggcaaaaccccttctctactaaaaa i gorGor5.CYUI01015413v1 C 0 C 0 s chlSab2.chr23 4702998 809 - 82825804 gagagagtAttgttttgttctgtcttttattttctttagagatgagctcttgctccatcatctaagttggagtgcagtggcatgatcaaagctcaccgcagcctcaaatgcctgggctcaagtgatccttccacttcagcctcctgagtatctgggattaaggaatgtgttgtttaatttttacgtatttgtggatttttcagcacaacttttactattggtttctttccattgtgattggaaacaatattttgtatgattttaatcttctaaaattcattaagacttgttttgtggcctaacacatcatctatctgggagaatgtttcat-atgcactgtaaaaaaaagtatattctgttgttaggtggattgtgttgtttatgtctgttagggccatttggtctatagtgttgttcaagttcttgtatttcctcattgatcttctgtctagttgttctatctgttattgaaagtgaaatactgaagtctcctactatttttttcaagttgtctatttctcccttcaattctatcaatgtttgctatgtatatttaggctctaatatttattgcataaatgtttttaattgttatatcttcttggcaaattgaccctttcaccattatataatattctcctctgtttcttgtaacagttttatttttacttaaagtctattttTAGGCTACGAgtggtggctcgtgcctataatcccacactttgggagcccaaggcaggcgggtcacctgaggtcaggagttcgagaccagcctggccaacatggtgaaaccctgtctctactaaaaa i chlSab2.chr23 C 0 I 30 s manLeu1.NW_012103943v1 198258 804 + 2521317 gagagATTAttgttttgttctgtcttttattttctttagagatgagctcttgctccatcatccaagttggagtgcagtggcatgatcaaagctcaccgcagcctcaaatgcctgggctcaagtgatccttccacttcagcctcctgagtatctgggattaaggaatgtgttgtttaatttttacgtatttgtggatttttcagcacaacttttactattggtttctttccattgtgattggaaacaatattttgtatgattttaatcttttaaaattcattaagacttgttttgtggcctaacacatcatctgtctgggagaatgtttcat-gtgcactgt-aaaaaaagtatattctgttgttaggtggattgtgttgtttatgtctgttagggccatttggtctatagtgttgttcaagttcttgtatttcctcattgatcttctgtctagttgt----tctgttattgaaagtgaaatactgaagtctcctaccatttttttcaagttgtctatttctcccttcaattctatcaatgtttgctatgtatatttaggctctaatatttattgcataaatgtttttaattgttatatcttcttggtgaattgaccctttcaccattatataatattctcctctgtttcttgtaacagttttatttttacttaaagtctattttTAGGCTACGAgtggtggctcatgcctataatcccacactttgggagcccaaggcaggcagatcacctgaggtcaggagttcgagaccagcctggccaacatggtgaaaccctgtctgtactaaaaa i manLeu1.NW_012103943v1 C 0 I 41 s colAng1.NW_012115755v1 1688943 808 - 2415367 gagagtgtattgttttgttctctcttttattttctttagagatgagctcttgcttcatcatccaagttggagtgcagtggcatgatcaaagctcactgcagcctcaaatgcctgggctcaagtgatccttccacttcagcctcctgaatatgtgggattaaggaatgtgttgtttaatttttacgtatttgtggatttttcagcacaacttttactattgatttctttccattgtgattggaaacaatattttgtatgattttaatcttttaaaattcattaagacttgttttgtggcctaacacatcatctatctgggagaatgtttcat-atgcacttt-taaaaaagtatattctgttgttgggtggattgtgttgtttatgtctgttggggccatttggtctatagtgttgttcaagttcttgtatttcctcattgatcttctgtctagttgttctatctgttattgaaagtgaaatactgaagtctcctactatttttttcaagttctctatttctctcttcaattctgtcaatgtttgctatgtatattcaggctctaatatttattgcataaatgtttttaattgttatatcttcttggtgaattgaccctttcaccattatataatattctcctctgtttcttgtaatagttttatttttacttaaagtctattttTAggctaggagtggtggctcacgcctgtaatcccacactttgggagcccaaggcaggcggatcacctgaggtcaggagttcgagaccagcctggccaacatggtgaaaccctgtctctactaacaa i colAng1.NW_012115755v1 C 0 I 11 s aotNan1.NW_018501968v1 1095189 798 - 2246441 aagagtatattgttttgttctctcttttattgtctttagagatgagctcttgctccgtcatccaagttggaatgc----------tcaaagctcactgcagcctcaaatgcgagggctcaagtgatccttctacctcagcctcctgagtagctgggattaaggaatgtgttgtttaatttttatgtatttgtggatttttcagcacaacttttgctattggtttctttccattgtgattgaaaacaatattttgtatgattttaatcctttaaaaatcattaagacttgttttgtggcctaacacatgagctatcctgcagaatgtttcag-atgcacttt-taaaacagtatattctactgttgggtagattgtgttgtttatgtctgttagggccatttggtctatagtgttgttcaagttcttgtatttccttattgatcttctgtctagttgttctatctgctattgaaagtgaagcactgaagtctcctactattattttcaagttgtctatttctctcttcaattctgtcagtgtttgcgttatatgtttaggctctaatatttattgcataaacgtttataattgttacatctttttgatgaattgaccctttcaccattatataatattctcctttgtttcttttaacagttttatttttacttaaagtctattttTAggctgggagtggtggctcatgcctataatcccacactttgggaggcctaggcaggtggatcatctgaagtcaggagttcaagaccagcctggccaacatggcgaaactccttctctactaaaca i aotNan1.NW_018501968v1 C 0 I 24 a score=6865.000000 s hg38.chr5_KI270795v1_alt 3408 14 + 131892 atacaaaaa-aaaac s panTro5.chr5 5252033 15 - 181907262 atacaaaaataaaac i panTro5.chr5 C 0 C 0 s panPan2.chr5 5514420 15 - 183735486 atacaaaaaaaaaac i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1612001 14 + 3967317 atacaaaaa-aacac i gorGor5.CYUI01015413v1 C 0 C 0 s colAng1.NW_012115755v1 1689762 14 - 2415367 aaaaaacaa-aaaac i colAng1.NW_012115755v1 I 11 C 0 e aotNan1.NW_018501968v1 1095987 24 - 2246441 I e manLeu1.NW_012103943v1 199062 41 + 2521317 I e chlSab2.chr23 4703807 30 - 82825804 I a score=14540.000000 s hg38.chr5_KI270795v1_alt 3422 20 + 131892 ttagctgggtgtggtggcac s panTro5.chr5 5252048 20 - 181907262 ttagctggatgtggtggcac i panTro5.chr5 C 0 C 0 s panPan2.chr5 5514435 20 - 183735486 ttagctggatgtggtggcac i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1612015 20 + 3967317 ttagctgggtgtggtggcac i gorGor5.CYUI01015413v1 C 0 C 0 s colAng1.NW_012115755v1 1689776 5 - 2415367 ttagc--------------- i colAng1.NW_012115755v1 C 0 C 0 s aotNan1.NW_018501968v1 1096011 20 - 2246441 ttagccaggtgtgatggcat i aotNan1.NW_018501968v1 I 24 C 0 e manLeu1.NW_012103943v1 199062 41 + 2521317 I e chlSab2.chr23 4703807 30 - 82825804 I a score=2099656.000000 s hg38.chr5_KI270795v1_alt 3442 936 + 131892 gcacccatagtcccagctgcttgggaggctgagacacgagaattgcttgaacctgggaggtggaagttgcagtgagccgagatcacgccactgcactccagtctggatgacagagtgagactccatcttaatttaaaaaagaaaaaaa------aGTCTA-TTTTTttccctctgtgtttctctctgt--ctctctcttttctttctggaattccaatagcttataacttggtccacttgatgttgttccatatgctccctaggctctgttcacttttcttcattg-tttttttctttttgcttctcagacttgataatttcaaatgatgtttcttcaagttcactgattcttctgcccattcaattctgattttgaacccctctagttaattttccaattcagttagcttatttttcaactctaggatgtctgtatggttctttttaaaaataatt--tgtctctttgctgatatcctattttgttcatgtattgttttcctgcttcctttaattcagtgtctcattgagtatatttaataaagaccattgttttaaagtctttgtttagtaagcctgaaacctgtgtttctttagagttggtttttggagatttattttgttgactttgatcaggccgtattttcctgtttct--ttgtgtgccttgtgatttt--------AAGAAGGCGTTTGAAAAAACAGCCACCTGTCCTAAGGGACCTAAAATCTCCCCTTTCTACCTATGCAGTGCTCCACTCTGCTGGTTTGTGCTGCTCTG-TCTTGGTATTCCCCC--AAATattttaaatta-ttt------ttttcattttcatgtaattttttattttttgaaatggagtctcactctgtcacccaggctggagtgcagtggcacgatctcggctt-actgcaacctccgccttttgggttcaagcaattctc---ctgcctcagcctcct-agtagc s panTro5.chr5 5252068 935 - 181907262 gcacccatagtcccagctgcttgggaggctgagacatgagaattgcttgaacctgggaggtggaagttgcagtgagccgagatcacgccactgcactccagtctggatgacagtgtgagactccatcttaatttaaaaaagaaaaaaa-------GTCTA-TTTTTttccctctgtgtttctctctgt--ctctctcttttctttctggaattccaatagcttataatttggtccacttgatgttgttccatatgctccctaggctctgttcacttttcttcattg-tttttttctttttgcttctcagacttgataatttcaaatgatgtttcttcaagttcactgagtcttctgcccattcaattctgattttgaatgcctctagttaattttccaattcagttagcttatttttcaactctaggatgtctgtatggttctttttaaaaataatt--tgtctctttgctgatatcctattttgttcatgtattgttttcctgcttcctttaattcagtgtcttattgggtatatttaataaagaccattgttttaaagtctttgtttagtaagcctgaaacctgtgtttctttagagttggtttttggagatttattttgttgactttgatcaggccatattttcctgtttct--ttgtgtgccttgtgatttt--------AAGAAGGTGTTTGAAAAAACAGCCACCTGTCCTAAGGGACCTAAAATCTCCCCTTCCTACCTATGCAGTGCTCCACTCTGCTGGTTTGTGCTGCTCTG-TCTTGGTATTCCCCC--AAATattttaaattg-ttt------ttttcattttcatgtaattttttattttttgaaatggagtctcactctgtcacccaggctggagtgcagtggcacgatcttggctt-actgcaacctccgcctttcgggttcaagcaattctc---ctgcctcagcctcct-agtagc i panTro5.chr5 C 0 C 0 s panPan2.chr5 5514455 934 - 183735486 gcacccatagtcccagctgcttgggaggctgagacatgagaattgcttgaacctgggaggtggaagttgcagtgagccgagatcacgccactgcactccagtctggatgacagtgtgagactccatcttaattt-aaaaagaaaaaaa-------GTCTA-TTTTTttccctctgtgtttctctctgt--ctctctcttttctttctggaattccaatagcttataatttggtccacttgatcttgttccatatgctccctaggctctgttcacttttcttcattg--ttttttctttttgcttctcagacttgataatttcaaatgatgtttcttcaagttcactgattcttctgcccattcaattctgattttgaacacctctagttaattttccaattcagttagcttatttttcaactctaggatgtctgtatggttctttttaaaaataatt--tgtctctttgctgatatcctattttgttcatgtattgttttcctgcttcctttaattcagtgtcttattgggtatatttaataaagaccattgttttaaagtctttgtttagtaagcctgaaacctgtgtttctttagagttggtttttggagatttattttgttgactttgatcaggccatattttcctgtttcctattgtgtgccttgtgatttt--------AAGAAGGTGTTTGAAAAAACAGCCACCTGTCCTAAGGGACCTAAAATCTCCCCTTTCTACCTATGCAGTGCTCCACTCTGCTGGTTTGTGCTGCTCTG-TCTTGGTATTCCCCC--AAATattttaaattg--tt------ttttcattttcatgtaattttttattttttgaaatggagtctcactctgtcacccaggctggagtgcagtggcacgatcttggctt-actgcaacctccgcctttcgggttcaagcaattctc---ctgcctcagcctcct-agtagc i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1612035 930 + 3967317 gcacccatagtcccagctgcttgggaggctgagacacgagaattgcttgaacctgggaggtggaagttgcagtgagctgagatcacgccactgcactccagtctggatgacagagtgagactccatcttaatttaaaaaagaaaaaaa------agccta-tttttttccctctgtgtttctctctgt--ctctc----ttctttctggaattccaatagcttataatttggtccacttgatgttgttccatatgctccctaggctctgttcacttttcttcatt---ttttttctttttgcttctcagacttgataatttcaaatgatgtttcttcaagttcactgattcttctgcccattcaattctgattttgaacccctctagttaattttccaattcagttagcttatttttcaactctaggatgtctgtatggttctttttaaaaataatt--tgtctctttgctgatatcctattttgttcatgtattgttttcctgcttcctttaattcagtgtctcattgggtatatttaataaagaccattgttttaaagtctttgtttagtaagcctgaaacctgtgtttctttagagttggtttttggagatttattttgttgactttgatcaggccatattttcctgtttct--ttgtgtgccttgtgatttt--------AAGAAGGCGTTTGAAAAAACAGCCACCTGTCCTAAGGGACCTAAAATCTCCCCTTTCTACCTATGCAGTGCTCCACTCTGCTAGTTTGTGCTGCTCTG-TCTTGGTATTCCCCC--AAATattttaaatta-ttt------ttttcattttcatgtaattttttattttttgaaatggagtctcactctgtcacccaggctggagtgcagtggcacgatcttggctt-actgcaacctccgcctttcgggttcaagcaattctc---ctgcctcagcctcct-agtagc i gorGor5.CYUI01015413v1 C 0 C 0 s chlSab2.chr23 4703837 948 - 82825804 gcacccatagtcccagctactttggaagctgagacacgagaattgcttgaacctgggaggcagaagttgcagtaagccaagatcgtgccactgcactgtagtctgggtgacagagtgagactccatcttaattaaaaaagaaaaaaaa----aGAGTCTA-TTTTTTTCCctctgtgtttctctctgtgcctctctcttctctttcttgaattccaagagcatataatttggtccacttaatgttgttccatgtgctccctaggctctgttcacttttcttcattgttttttttctttttgcttctcagacttcatgatttcaaatgatgtttcttcaaattcactgattcttctgcccattcaattctgatgttgaacccctctagttaattttccaattcagttagcttattttttaactctaagatgtctgtttggttctttttaaaaataatttctgtctctttgctaatatcctattttgttcatgtattgttttcctgattcctttaattcagtgtctcattgagtatatttgataaacaccattgttttaaagtctttgtttagtaagcctgaagcctgtgtttccttaaagttggtttctggagatttattttgtt-actttgatcaggccatattttcctgtttct--ttgtgtgcc-tgtgatttt--------AAGAAGGCATTTGAAAAAACAGCCACCTGTCCTAAGGGACCTAAGATCTCCCCTTTCTACCTATGCAGTGCTCCACTCTGCTGATTTGTGCTGCTCTC-TCTTGGTATTCCCCC-AAAATATTTTAAATTA-TTTTTTTCAttttcattttcattttattttttattttttgagatggagtctcactctgtcacctaggctggagtgcagtggcaccatctcagctt-actgcaacctccgcctttggagttcaagcaattctc---ctgcctcagcctcct-agtagc i chlSab2.chr23 I 30 C 0 s manLeu1.NW_012103943v1 199103 949 + 2521317 gcacccatagtcccagctactttggaagctgagacatgagaattgcttgaacctgggaggcagaagttgcagtaagccaagatcgtgccactgcactgtagtctgggtgacagagtgagactccatattaattaaaaaag-aaaaaaa----aGAGTCTA-TTTTTTTCCCTCTGTGTttctctctgtgcctctctcttctctttcttgaattccaagagcatataatttggtccacttaatgttgttccatatgctccctaggctctgttcacttttcttcattgttttttttctttttgcttctcagacttcataattccaaaggatgttccttcaaattcactgattcttctgtccattcaattctgatgttgaacccctctagttaattttccaattcagttagcttatttttcaactctaagatgtctgtttggttctttttaaaaataatttctgtctctttgctaataccctattttgttcatgtattgttttcctgattcctttaattcagtgtctcattgagtatatttgataaacaccattgttttaaagtctttgtttagtaagcctgaagcctgtgtttccttaaagttggtttctggagatttattttgtt-actttggtcaggccatattttcctgtttct--ttgtgtgccttgtgatttt--------AAGAAGGCATTTGAAAAAACAGCCACCTGTCCTAAGGGACCTAAGATCTCCCCTTTCTACCTATGCAGTGCTCCACTCTGCTGATTTGTGCTGCTCTG-TCTTGGTATTCCCCC-AAAATATTTTAAATTATTTTTTTTCAttttcattttcattttattttttattttttgagatggagtctcactctgtcacctaggctggagtgcagtggcaccatctcagctt-actacaacctccgcctttggagttcaagcaattctc---ctgcctgagcctcct-agtagc i manLeu1.NW_012103943v1 I 41 C 0 s colAng1.NW_012115755v1 1689781 943 - 2415367 --acccatggtcccagctacttcggaagctgagacacgagaattgcttgaacctgggaggcagaagttgcagtgagccaagattgtgccactgcactctagtctgggtgacagagtgagactccatcttaattaaaaaagaaaaaaga----aGAGTCTA-TTTTTTTCCCACTGTGTttctctctgtgcctctctcttctctttcttgaattctaagagcatataatttggtccacttaatgttgttccacatgctccctaggctctgttcacttttcttcattg--ttttttctttttgcttctcagacttcataattccaaatgatgtttctttaagttcactgattcttctgcccattcaattctgatgttgaacccctctagttaattttccaatttagttagcttatttttcaactctaagatgcctgtttggttctttttgaaagtaatttctgtctctttgctaatatcctattgtgttcatgtattgttttcctgattcctttaattcagtgtctcattgagtatatttgataaagaccattgttttaaagtctttgtttagtaagcctgaagcctgtgtttccttaaagttggtttctggagatttattttgtt-actttgatcaggccatattttcctgtttct--ttgtgtgccttgtgatttt--------AAGAAGGCATTTGCAAAAACAGCCACCTGTCCTAAGGGACCCAAGATCTCCCCTTTCTACCTATGCAGTGCTCCACTCTGCTGGTTTGTGCTGCTCTG-TCTTGGTATTCCCCC-AAAATATTTAAAATTT-TTTTTTTCAttttcattttcattttattttttattttttgagatggagtct--ctctgtcacctaggctggagtgcagtggcaccatctcagctt-actgcaacctccgcctttcaggttcaagcaattctc---ctgcctcagcctcct-aatagc i colAng1.NW_012115755v1 C 0 C 0 s aotNan1.NW_018501968v1 1096031 947 - 2246441 gtgcctgtagtcccagctactcaggaggctgaggcaaaagaattgcttgaacctggaaggtggaggttgcagggagccgagatcatgctactgcactccatcctgagtgacagagtgagactctgtcttaattaaaaaaaaaaaaaaaaaaaaGAGTCTATTTTTTTTTCCTTCGTGtttctctctgt--ctctctcttctctttttggaattccaatagtgtataaattggttcatttgatgttgttctgtatgcttcctaggctctattcactttccttcatt---ttttttcttttttcttctcagatttgataatttcaaatgatatttcctcaagttcactgattcttgtgcccattcaattctgatgttgaacccctctagttaattttccaattcagttagtttatttttcaactctagg----ctgtttggttctttttaaaaataacttctacctctttgctgatatcctattttgttcatgtactgttctcctgattcctttaattcaatgtcttattgagtatattt----aagaccattttttt--agtctttgtttagtaagtctgaaacttgtgtttctttagagttgatttctggagatttattttgtt-cctttgatcaggccatatttccctgtttct--ttgtatgccttgaggtcttgtactggaaagaaggcatttgaaaaaatggccacctctcCTAAGGGACCCAAAATCTACCCTTTCTACCTATGCAGTGCTCCACTCTGCTGATTTGTGCTGCTCTGTTCTTGATATTCCCCCCAAAATATTTTAAATTA-Att------ttttcattttcattttctttttacttttatgagatagagtctcactctgtcgcccaggctggagtgcagtggtgtgatcttgtctcaactacaacctctgctcct-gggttcaagcaattcttcagctgcctcagcctcctgagtagc i aotNan1.NW_018501968v1 C 0 I 26 a score=32190.000000 s hg38.chr5_KI270795v1_alt 4378 19 + 131892 tggaactatatgcatgtac s panTro5.chr5 5253003 19 - 181907262 tggaactatatgcatgtac i panTro5.chr5 C 0 C 0 s panPan2.chr5 5515389 19 - 183735486 tggaactatatgcatgtac i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1612965 19 + 3967317 tggaactatatgcatgtac i gorGor5.CYUI01015413v1 C 0 C 0 s chlSab2.chr23 4704785 19 - 82825804 tgggactatatgcttgcac i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 200052 19 + 2521317 tgggactatatgcttgcac i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1690724 19 - 2415367 tgggactatatgcttgcac i colAng1.NW_012115755v1 C 0 C 0 e aotNan1.NW_018501968v1 1096978 26 - 2246441 I a score=328041.000000 s hg38.chr5_KI270795v1_alt 4397 149 + 131892 caccacgcctggctaatttt---tgtatttttagtagagatgggg-tttcactatattggccaggctggtctcgaactcctgatctcaggtgatctgcctgcctcagcctcccaaaatgctgggattacaggcatgaaccaccatacccggcc s panTro5.chr5 5253022 149 - 181907262 caccacgcctggctaatttt---tgtatttttagcagagatgggg-tttcactatgttggccaggctggtctcgaactcctgatctcaggtgatctgcctgcctcagcctcccaaaatgctgggattacaggcatgagccaccatgcccggcc i panTro5.chr5 C 0 C 0 s panPan2.chr5 5515408 149 - 183735486 caccacgcctggctaatttt---tgtatttttagcagagatgggg-tttcactatgttggccaggctggtctcgaactcctgatctcaggtgatctgcctgcctcagcctcccaaaatgctgggattacaggcatgagccaccatgcccggcc i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1612984 147 + 3967317 caccacgcctggctaa--tt---tgtacttttagtagagatgggg-tttcactatgttggccagggtggtcttgaactcctgatctcaggtgatctgcctgcctcagcctcccaaaatgctgggattacaggcatgagccaccatgcctggcc i gorGor5.CYUI01015413v1 C 0 C 0 s chlSab2.chr23 4704804 149 - 82825804 caccatgcctggctaatttt---tgtatttttagtagagatgggg-tttcactatgctggccaggctggtctcgaactcctgatctcaggtgatctgcctgcctcaacctcccaaagtgttgggattacaggcgtgatccactgtgcccggcc i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 200071 149 + 2521317 caccatgcctggctaatttt---tgtatttttagtagagatgggg-tttcactatgctggccaggctggtctcgaactcctgatctcaggtgatctgcctgcctcaacctcccaaagtgttgggattacaggcgtgatccactgtgcccggcc i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1690743 149 - 2415367 caccatgcctggctaatttt---tgtatttttagtagagatgggg-tttcactctgctggccaggctggtatcgaactcctgatctcaggtgatctgcctgcctcaacctcccaaagtgttgggattacaggcgtgagccactgtgcctggcc i colAng1.NW_012115755v1 C 0 C 0 s aotNan1.NW_018501968v1 1097004 149 - 2246441 cacaatgcctggctaattttttatatttttttag-agagttggggttttcactatgttggtcaggatggtcttgaactcctgatctaaggtgatct-cctg-ctcaggctcccaaagtgctgggatt-taggtgtgagccactgcacctagcc i aotNan1.NW_018501968v1 I 26 C 0 a score=234792.000000 s hg38.chr5_KI270795v1_alt 4546 87 + 131892 tattcttttcattttcatACAGAGCAACTCAACTCTCCCATGACCATACCCAATCTAAACACTTAAACCCATCTTTATATGGAGAAT s panTro5.chr5 5253171 87 - 181907262 tattcttttcattttcatACAGAGCAACTCAACTCTCCCATGACCATACCCAATCTAAACACTTAAACCCATCTTTATATGGAGAAT i panTro5.chr5 C 0 C 0 s panPan2.chr5 5515557 87 - 183735486 tattcttttcattttcatACAGAGCAACTCAGCTCTCCCATGACCATACCCAATCTAAACACTTAAACCCATCTTTATATGGAGAAT i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1613131 87 + 3967317 tattcttttcattttcatACAGAGCAACTCAACTCTCCCATGACCATACCCAATCTAAACACTTAAACCCATCTTTATATGGAGAAT i gorGor5.CYUI01015413v1 C 0 C 0 s chlSab2.chr23 4704953 87 - 82825804 TATTCATTTCATTTTCATACAGAGCAACTCAACTCTCCCATGACCCTACCCAGTCTGAACACTTAAATCCATCTTTATATGGAGAAT i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 200220 87 + 2521317 TATTCGTTTCATTTTCATACAGAGCAACTCAACTCTCCCATGACCCTACCCAGTCTGAACACTTAAATCCATCTTTATATGGAGAAT i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1690892 87 - 2415367 TATTCGTTTCATTTTCATACAGAGCAACTCAACTCTCCCATGACCTTACCCAGTCTGAACACTTAAACCCATCTTTATATGGAGAAT i colAng1.NW_012115755v1 C 0 C 0 s aotNan1.NW_018501968v1 1097153 87 - 2246441 TATTCTTTTAGTTTTTATGCAGAGCAACTCAACTGTCCCATGACCATACCCAATCTGAACACCTAAACCCATCTTCATATGGAGAAT i aotNan1.NW_018501968v1 C 0 I 42 s dasNov3.JH562710 207776 79 - 960158 TATTC-TTTCATTTTTATGCAGACTAATTCA---CTCTCATGTCTTTATC----CTGCACACCTAAACCCATTCTGACGTGGAGAGT i dasNov3.JH562710 N 0 C 0 a score=125065.000000 s hg38.chr5_KI270795v1_alt 4633 57 + 131892 CGGTGAGGCC-TCTGTTTTGCATATCCAAACACTTAAGGGAGCAGTAGGAATTCTGTA s panTro5.chr5 5253258 57 - 181907262 CGGTGAGGCC-TCTGTTTTGCATATCCAAACACTTAAGGAAGCAGTAGGAATTCTGTA i panTro5.chr5 C 0 C 0 s panPan2.chr5 5515644 57 - 183735486 CGGTGAGGCC-TCTGTTTTGCATATCCAAACACTTAAGGAAGCAGTAGGAATTCTGTA i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1613218 57 + 3967317 CGGTGAGGCC-TCTGTTTTGCATATCCAAACACTTAAGGAAGCAGTAGGAATTCTGTA i gorGor5.CYUI01015413v1 C 0 C 0 s chlSab2.chr23 4705040 57 - 82825804 CGGTGAGGTC-TCTGTTTTGTATATCTAAACACTTAAGGGAGCAGTAGGAGTTCTGTA i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 200307 57 + 2521317 CGGTGAGGTC-TCTGTTTTGTATATCCAAACACTTAAGGGAGCAGTAGGAGTTCTGCA i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1690979 57 - 2415367 CGGTGAGGTC-TCTGTTTTGTATATCCAAACACTTAAGAGAGCAGTAGGAGTTCTGTA i colAng1.NW_012115755v1 C 0 C 0 s dasNov3.JH562710 207855 58 - 960158 AGGTAAGGCCTTCTATTTTGCATACCCAGTTTCTTCAGAGAGCAGTTGGAGTTCTGCA i dasNov3.JH562710 C 0 C 0 e aotNan1.NW_018501968v1 1097240 42 - 2246441 I a score=222898.000000 s hg38.chr5_KI270795v1_alt 4690 81 + 131892 GAGCAATATTTTTTGTTTGTTTTGAATTACATCTATGGATATTTCCTCTATAAATGGTTTCCTAATTTTTCCCTTTTTAGT s panTro5.chr5 5253315 81 - 181907262 GAGCAATATTTTTTGTTTGTTTTGAATTACATCTATGGATATTTCCTCTATAAATGGTTTCCTAATTTTTCGCTTTGTAGT i panTro5.chr5 C 0 C 0 s panPan2.chr5 5515701 81 - 183735486 GAGCAATATTTTTTGTTTGTTTTGAATTACATCTATGGATATTTCCTCTATAAATGGTTTCCTAATTTTTCGCTTTTTAGT i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1613275 81 + 3967317 GAGCAATATTTTTTGTTTGTTTTGAATTACATCTATGGATATATCCTCTATAAATGGTTTCCTAATTTTTCCCTTTTTAGT i gorGor5.CYUI01015413v1 C 0 C 0 s chlSab2.chr23 4705097 81 - 82825804 GAGCAGTATTTTTGGTTTGTTTTGAATTACATCTATGGGTACTTCCTCTATAAATCATATCCTAATTTTTCCCTTTCTAGT i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 200364 81 + 2521317 GAGCAATATTTTTGGTTTGTTTTGAATTACATCTATGGGTACTTCCTCTATAAATCATTTCCTAATTTTTCCCTTTCTAGT i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1691036 81 - 2415367 GAGCAATATTCTTGGTTTGTTTTGAATTACATCTATGGGTACTTCCTCTATAAATCATTTCCTAATTTTTTCCTGTCTAGT i colAng1.NW_012115755v1 C 0 C 0 s aotNan1.NW_018501968v1 1097282 81 - 2246441 GAGTAATATTTGTGGTTTGTTTTGAATTATATCTATGGATACTTTCTCTGTAAATCGTTTCCTTATTTTTCCCTTTCTAGT i aotNan1.NW_018501968v1 I 42 C 0 s dasNov3.JH562710 207913 81 - 960158 GAGCAATATCTTTGGTTTGTTTTAAATTACTCCTATGACTACTTCCTCTATAAAAGGTTTCCTAATTTTTCCCTTTGCAAT i dasNov3.JH562710 C 0 I 60 a score=33708.000000 s hg38.chr5_KI270795v1_alt 4771 14 + 131892 TTTTTCACCAAAAT s panTro5.chr5 5253396 14 - 181907262 TTTTTCACCAAAAC i panTro5.chr5 C 0 C 0 s panPan2.chr5 5515782 14 - 183735486 TTTTTCACCAAAAC i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1613356 14 + 3967317 TTTTTCACCAAAAC i gorGor5.CYUI01015413v1 C 0 C 0 s chlSab2.chr23 4705178 14 - 82825804 TTTTTCACCAAAAT i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 200445 14 + 2521317 TTTTTCACCAAAAT i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1691117 14 - 2415367 TTTTTCACCAAAAT i colAng1.NW_012115755v1 C 0 C 0 s aotNan1.NW_018501968v1 1097363 14 - 2246441 TTTTTCATCAAAAT i aotNan1.NW_018501968v1 C 0 I 363 e dasNov3.JH562710 207994 60 - 960158 I a score=574622.000000 s hg38.chr5_KI270795v1_alt 4785 319 + 131892 TCTTATTGGCCTCTCAATAACTCTTATTGTTGTTGTTGTCAagacagagtcttgttctgtcctccaacctggagtgcagtggcatgatctcgactcactgcaacctccatctcctggattcattcgattctcttgcctcagcctcctgagtagctgggactacagttgtgcatcaccatgcccagctaatttttgtatttttagtagagacagggtttcaccatgttggccagggtggtctcaaaatccttacatcaggtggtctacccgcctcagcctccaaggtgctgggattacaggtgtgagccaccacaccAGC s panTro5.chr5 5253410 319 - 181907262 TCCTATTGGCCTCTCAATAATTCTTATTGTTGTTGTTGTCAagacagagtcttgttctgtcctccaacctggagtgcagtggcatgatcttgactcactgcaacctccatctcctggattcattcgattctcttgcctcagcctcctgagtagctgggactacagttgcgcaccaccacgcccagctaatttttgtatttttagtagagacagggtttcaccatgttggccaggctggtctcaaactccttacatcaggtggtctacccgcctcagcctccaaggtgctgggattacaggtgtgagccaccacaccAGC i panTro5.chr5 C 0 C 0 s panPan2.chr5 5515796 319 - 183735486 TCCTATTGGCCTCTCAATAATTCTTATTGTTGTTGTTGTCAagacagagtcttgttctgtcctccaacctggagtgcagtggcatgatctcgactcactgcaacctccatctcctggattcattcgattctcttgcctcagcctcctgagtagctgggactacagttgcacaccaccacgcccagctaatttttgtatttttagtagagacagggtttcaccatgttggccaggctggtctcaaactccttacatcaggtggtctacccgcctcagcctccaaggtgctgggattacaggtgtgagccaccacaccAGC i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1613370 319 + 3967317 TCCTATTGGCCTCTCAATAATTCTTATTGTTGTTGTTGTCAagacacagtcttgttctgtcctccaacctggagtgcagtggcatgatctcgactcactgcaacctccatctcctggattcattcgattctcttgcctcagcctcctgagtagctgggactacacttgcgcaccaccacgcccagctaatttttgtatttttagtagagacagggtttcaccatgttggccaggctggtctcgaactccttacatcaggtggtctacccgcctcagcctccaaggtgctgggattacaggtgtgagccaccacaccAGC i gorGor5.CYUI01015413v1 C 0 C 0 s chlSab2.chr23 4705192 318 - 82825804 TCC-ACTGGCCTCTAAATAAGttttgttgttgttgttgttgagacagagtcttgttctgtccttgaacctggagtgcagtggcatcatcttgactcactgcaacctccatctcctgggttcatttgatgctcttgcctcagccttctgagtagctggaactacagttgtgcgccaccacgctcagctaatttttgtatttttagtagagacagggtttcatcatgttggccaggctggtctcaaactccttacatcaggtggtccacccgcctcagcctccagagtgctgggattataggtgtgagccaccacaccAGC i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 200459 315 + 2521317 TCC-ACTGGCCTCTAAATAAGtt---ttgttgttgttgttgagacagagtcttgttctgtcctccaacctggagtgcagtggcatgatcttgactcactgcaacctccatctcctgggttcatttgatgctcttgcctcagccttctgagtagctggaactacagttgtgcgccaccacgctcagctaatttttgtatttttagtagagacaaggtttcattatgttggccaggctggtctcaaactccttacatcaggtggtccacccgcctcagcctccagagtgctgggattataggtgtgagccaccacaccAGC i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1691131 315 - 2415367 TCC-ACTGGCCTCTAAACAAttt---ttgttgttgttgttgagacagagtcttgttctgtcctccaacctggagtgcagtggcatgatcttgactcactgcaacctccatctcctgggttcatttgatgctcttgcctcagccttctgagtagctggaactacagttgtgcgccaccacgctcagctaatttttgtatttttagtagagacggggtttcatcatgttggccaggttggtctcaaactccttacatcaggtggtccacccgcttcagcctccaaagtgctgggattacaggtgtgagccaccacaccAGC i colAng1.NW_012115755v1 C 0 C 0 e dasNov3.JH562710 207994 60 - 960158 I e aotNan1.NW_018501968v1 1097377 363 - 2246441 I a score=72593.000000 s hg38.chr5_KI270795v1_alt 5104 29 + 131892 TTAAATAATTCTTAAAATTAGTAATTTTT s panTro5.chr5 5253729 29 - 181907262 TTAAATAATTCTTAAAATTAGTAATTTTT i panTro5.chr5 C 0 C 0 s panPan2.chr5 5516115 29 - 183735486 TTAAATAATTCTTAAAATTAGTAATTTTT i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1613689 29 + 3967317 TTAAATAATTCTTAAAATTAGTAATTTTT i gorGor5.CYUI01015413v1 C 0 C 0 s chlSab2.chr23 4705510 29 - 82825804 TTAAATAATTCTTAAAATCAGTAATTTTT i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 200774 29 + 2521317 TTAAATAATTCTTAAAATCAGTAATTTTT i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1691446 29 - 2415367 TTAAATAATTCTTAAAATCAGTAATTTTT i colAng1.NW_012115755v1 C 0 C 0 s aotNan1.NW_018501968v1 1097740 29 - 2246441 TTAAATAATTCTTAAAATTAGTAATTTTT i aotNan1.NW_018501968v1 I 363 I 471 e dasNov3.JH562710 207994 60 - 960158 I a score=204483.000000 s hg38.chr5_KI270795v1_alt 5133 120 + 131892 GGTA-AAATTTTtaaatatattttgtataagtttatatctaggtattttatcatataaacatttaaatatatgaatatatatttatattttaaaatcacatatatatgactaaagcagaac s panTro5.chr5 5253758 120 - 181907262 GGTA-AAATTTTTCAATATATTTTGTATAAGTTTATATCTAGGTATTTTATCATATAAACATTTAAATATATGAATATATATTTATATTTTAAAATCACATATATATGACTAAAGCAGAAC i panTro5.chr5 C 0 C 0 s panPan2.chr5 5516144 120 - 183735486 GGTA-AAATTTTTCAATATATTTTGTATAAGTTTATATCTAGGTATTTTATCATATAAACATTTCAATATATGAATATATATTTATATTTTAAAATCACATATATATGACTAAAGCAGAAC i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1613718 120 + 3967317 GGTA-AAatttatttatatattttgtataagtttatatctaggtattttatcatataaacatttaaatatatgaatatatatttatatttcaaaatcacatatatatgactaaagcagaac i gorGor5.CYUI01015413v1 C 0 C 0 s chlSab2.chr23 4705539 120 - 82825804 GGTA-AAaattttttacgtattttgtataaatttatatctaggtattttatcatataaacatttaaatatataaatatatatttatatttaaaaatcacatatatgtgactaaagcataac i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 200803 121 + 2521317 GGTAGAAAATTTTTtatgtattttgtataaatttatatctaggtattttatcatataaacatttaaatatataaatatatatttatatttaaaaatcacatatatgtgactaaagcataac i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1691475 121 - 2415367 GGTAAAAAAATTTTtatgtattttgtataaatttatatctaggtattttatcatataaacatttaaatatgtaaatatatatttatattttaaaatcacatatatGTGACTAAAGCATAAC i colAng1.NW_012115755v1 C 0 C 0 e dasNov3.JH562710 207994 60 - 960158 I e aotNan1.NW_018501968v1 1097769 471 - 2246441 I a score=10192.000000 s hg38.chr5_KI270795v1_alt 5253 4 + 131892 atat s panTro5.chr5 5253878 4 - 181907262 ATAT i panTro5.chr5 C 0 C 0 s panPan2.chr5 5516264 4 - 183735486 ATAT i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1613838 4 + 3967317 atat i gorGor5.CYUI01015413v1 C 0 C 0 s chlSab2.chr23 4705659 4 - 82825804 atat i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 200924 4 + 2521317 atat i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1691596 4 - 2415367 ATAT i colAng1.NW_012115755v1 C 0 C 0 s aotNan1.NW_018501968v1 1098240 4 - 2246441 ATAT i aotNan1.NW_018501968v1 I 471 C 0 e dasNov3.JH562710 207994 60 - 960158 I a score=6105.000000 s hg38.chr5_KI270795v1_alt 5257 5 + 131892 atat----a s panTro5.chr5 5253882 5 - 181907262 ATAT----A i panTro5.chr5 C 0 C 0 s panPan2.chr5 5516268 5 - 183735486 ATAT----A i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1613842 5 + 3967317 atat----a i gorGor5.CYUI01015413v1 C 0 C 0 s chlSab2.chr23 4705663 9 - 82825804 atatacata i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 200928 9 + 2521317 atatacata i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1691600 4 - 2415367 ATAT----- i colAng1.NW_012115755v1 C 0 C 0 s aotNan1.NW_018501968v1 1098244 5 - 2246441 ATAT----A i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 691954 5 - 940639 atAT----A i proCoq1.NW_012152163v1 N 0 C 0 e dasNov3.JH562710 207994 60 - 960158 I a score=378528.000000 s hg38.chr5_KI270795v1_alt 5262 115 + 131892 tCTGCTTTAGTTCTGAATATTAGTCTGGTATATAATTAAGTTGTAACATTATCAGCTTTGTGATATAAAATTTTAAGCTGCTGAAATGAAACTC--TATCCTTTCTTTAGTTTGATT s panTro5.chr5 5253887 115 - 181907262 TCTGCTTTAGTTCTGAATATTAGTCTGGTATATAATTAAGTTGTAACGTTATCAGCTTTGTGATATAAAATTTTAAGCTGCTGAAATGAAACTC--TATCCTTTCTTTAGTTTGAGT i panTro5.chr5 C 0 C 0 s panPan2.chr5 5516273 115 - 183735486 TCTGCTTTAGTTCTGAATATTAGTCTGGTATATAATTAAGTTGTAACGTTATCAGCTTTGTGATATAAAATTTTAAGCTGCTGAAATGAAACTC--TATCCTTTCTTTAGTTTGAGT i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1613847 115 + 3967317 tCTGCTTTAGTTCTGAATATTAGTCTGGTATATAATTAAGTTGTAACATTATCAGCTTTGTGATATAAAATTTTAAGCTGCTGAAATGAAACTC--TATCCTTTCTTTAGTTTGATT i gorGor5.CYUI01015413v1 C 0 C 0 s chlSab2.chr23 4705672 117 - 82825804 tCTGCTTTAGTTCTGAATATTACTCTGGTATATAATTAAGCTGTAATATTATCAACTTTGTGATTTATAATTTTAAGCTGCTGAAATGAAACTCTGTATCCTTTCTTTAGTATGATT i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 200937 117 + 2521317 tCTGCTTTAGTTCTGAATATTAGTCTGGTATATAATTAAGCTGTAATATTATCAGCTTTGTGATTTATAATTTTAAGCTGCTGAAATGAAACTCTGTATCCTTTCTTTAGTATGATT i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1691604 117 - 2415367 TCTGCTTTCATTCTGAATATTAGTCTGGTATATAATTAAGCTGTAATATTATCAGCTTTGTGATTTAAAATTTTAAGCTGCTGAAATGAAACTCTGTATCCTTTCTTTAGTATGATT i colAng1.NW_012115755v1 C 0 C 0 s aotNan1.NW_018501968v1 1098249 117 - 2246441 TCTGCTTTAGTTCTGATTCTTAGTCTGGCATACAATTAAGTTGTAATATTAACAGCTGTGTGATTTAAAATTTTAAGCTGCTGAAATGAAACTCTGTATCCTTTCTTTAGTTTGATT i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 691959 116 - 940639 TCTGCTTTAGTTCCTAATGTTAGCCTGGTATATAATAGAGTTGTAATATTATCAGCTTCATAAT-TAAAATTTTAAGCTGTTGCAACCAAACTCTATATCCTTTCCTTAATTTGATT i proCoq1.NW_012152163v1 C 0 I 783 s canFam3.chr4 37126310 116 + 88276631 TCTTCTTTAGTTCCCAATATTAGTTAGCTATATTATAGAATTATAATACTATCGGCTTCATAAG-TAAAATTTTAAGCTGCTGAACTCAAACTCTGTATCCTTCCTGTAGTTTGATT i canFam3.chr4 N 0 C 0 e dasNov3.JH562710 207994 60 - 960158 I a score=59031.000000 s hg38.chr5_KI270795v1_alt 5377 25 + 131892 TCTTCACTTACCTGATAATTCTAAT s panTro5.chr5 5254002 25 - 181907262 TCTTCACTTACCTGATAATTCTAAT i panTro5.chr5 C 0 C 0 s panPan2.chr5 5516388 25 - 183735486 TCTTCACTTACCTGATAATTCTAAT i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1613962 25 + 3967317 TCTTCACTTACCTGATAATTCTAAT i gorGor5.CYUI01015413v1 C 0 C 0 s chlSab2.chr23 4705789 25 - 82825804 TCTTCACTTACCTGATAGAATTAAT i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 201054 25 + 2521317 TCTTCACTTACCTGATAGAATTAAT i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1691721 25 - 2415367 TCTTCACTTAGCTGATAGAATTAAT i colAng1.NW_012115755v1 C 0 C 0 s aotNan1.NW_018501968v1 1098366 25 - 2246441 TCTTCACTTACCTAATAATTCTAAT i aotNan1.NW_018501968v1 C 0 C 0 s canFam3.chr4 37126426 24 + 88276631 TCCTC-CTTGTTTGATAACTGTAAT i canFam3.chr4 C 0 I 609 e proCoq1.NW_012152163v1 692075 783 - 940639 I e dasNov3.JH562710 207994 60 - 960158 I a score=69417.000000 s hg38.chr5_KI270795v1_alt 5402 28 + 131892 tatcttccagttgttctgcttctctggc s panTro5.chr5 5254027 28 - 181907262 tatcttccagttgttctgcttctctggc i panTro5.chr5 C 0 C 0 s panPan2.chr5 5516413 28 - 183735486 tatcttccagttgttctgcttctctggc i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1613987 28 + 3967317 tatcttccagtttttctgcttctctggc i gorGor5.CYUI01015413v1 C 0 C 0 s chlSab2.chr23 4705814 28 - 82825804 tatcttccaattgttcagcttctctggc i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 201079 28 + 2521317 tatcttccaattgttcagcttctctggc i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1691746 28 - 2415367 tatcttccaattgttctgcttctctggc i colAng1.NW_012115755v1 C 0 C 0 s aotNan1.NW_018501968v1 1098391 28 - 2246441 tatcttctactggttatgctcctttggc i aotNan1.NW_018501968v1 C 0 C 0 s canFam3.chr4 37127059 27 + 88276631 tatcttctacaagtt-tgcttctctgtt i canFam3.chr4 I 609 C 0 e proCoq1.NW_012152163v1 692075 783 - 940639 I e dasNov3.JH562710 207994 60 - 960158 I a score=411405.000000 s hg38.chr5_KI270795v1_alt 5430 127 + 131892 tgaaccctgacggatacaTACCCATATGTTGAGGCTTTGCCAGAGGTGACAAG------TCTGTTTTC-TTTTACAACATCAGCTTCTCTAAAGTCCTCTGACCCCCAAAGGACTTATACTTCAAGACTCCCCT---------- s panTro5.chr5 5254055 127 - 181907262 tgaaccctgatggatacaTACCCATATGTTGAGGCTTTGCCAGAGGTGACAAG------TCTGTTTTC-TTTTACAACTTCAGCTTCTCTAAAGTCCTCTGACCCCCAAAGGACTTATACTTCAAGACTCCCCT---------- i panTro5.chr5 C 0 C 0 s panPan2.chr5 5516441 127 - 183735486 tgaaccctgatggatacaTACCCATATGGTGAGGCTTTGCCAGAGGTGACAAG------TCTGTTTTC-TTTTACAACATCAGCTTCTCTAAAGTCCTCTGACCCCCAAAGGACTTATACTTCAAGACTCCCCT---------- i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1614015 127 + 3967317 tgaaccctgacggatacaTACCCATATGTTGAGGCTTTGCCAGAGGTGACAAG------TCTGTTTTC-TTTTACAACATCAGCTTCTCTAAAGTCCTCTGACCCCCAAAGGACTTATACTTCAAGACTCCCCT---------- i gorGor5.CYUI01015413v1 C 0 C 0 s chlSab2.chr23 4705842 127 - 82825804 tgaaccctgattgctacaTACCCATATGTTGAGGCTTTGCCAGAGGTGACAAG------CCTGTTTTC-TTTTACAACGTCAGCTTCTCGAAAGTCCTCTGACCCCCAAAGAACTTATACTTCAAGACTCCCCT---------- i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 201107 127 + 2521317 tgaaccctgattgctacaTACCCATATGTTGAGGCTTTGCCAGAGGTGACAAG------CCTGTTTTC-TTTTACAACGTCAGCTTCTCGAAAGTCCTCTGACCCCCAAAGGACTTATACTTCAAGACTCCCCT---------- i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1691774 127 - 2415367 tgaaccctgattgctacaTACCCATATGTTGAGGCTTTGCCAGAGGTGACAAG------CCTGTTTTC-TTTTACAACATCAGCTTCTCAAAAGTCCTCTGACCCCCAAAGGACTTATACTTCAAGACTCCCCT---------- i colAng1.NW_012115755v1 C 0 C 0 s aotNan1.NW_018501968v1 1098419 126 - 2246441 tgaaccctgactgctacaCACCCACATTCTGAGGCTTTGCCAGAGGTGACAAG------CCTGTTTTC-TTTTACAACGTCAGATTCTCTGAAGTCCTCTAACCTCCAAAGGACTTA-ACTTCAAGACTCCTCT---------- i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 692858 128 - 940639 tgaaccctaactgatacaCACCCTTCTGTTGAAGCTTTGTCAGAGGCGACAGG------CCTGTTTTCTTTTTACAACAGCATCTTCTCCAAAGTCCTCTTATCCCCAAAGGACTTATATTTCAAGATCCCCCT---------- i proCoq1.NW_012152163v1 I 783 I 56 s canFam3.chr4 37127086 137 + 88276631 tgaaccctgattgatacaCACCTACACGGTGATGCTTTGCTTGGAGTGACAGGCTCCTTCCTGTTTTC-TTT----ACATTAGC-TCTCCAAAGTCCTAC-AGGATCAAAAGACTTCTACTTCCAGCCTCCCTCTTTCTTTTCT i canFam3.chr4 C 0 C 0 e dasNov3.JH562710 207994 60 - 960158 I a score=78071.000000 s hg38.chr5_KI270795v1_alt 5557 32 + 131892 ACTCTTCTTTCACTGTAAGAT------TTTTCCCCTGT----- s panTro5.chr5 5254182 32 - 181907262 ACTCTTCTTTCACTGTAAGAT------TTTTCCCCTGT----- i panTro5.chr5 C 0 C 0 s panPan2.chr5 5516568 32 - 183735486 ACTCTTCTTTCACTGTAAGAT------TTTTCCCCTGT----- i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1614142 32 + 3967317 ACTCTTCTTTCACTGTAAGAT------TTTTCCCCTGT----- i gorGor5.CYUI01015413v1 C 0 C 0 s chlSab2.chr23 4705969 34 - 82825804 ACTCTTCCTTCACTGTAAGATTT----TTTTCCCCCGT----- i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 201234 34 + 2521317 ACTCTTCCTTCACTGTAAGATTG----TTTTCCCCCGT----- i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1691901 33 - 2415367 ACTCTTCCTTCACTGTAAGATT-----TTTTCTCCTGT----- i colAng1.NW_012115755v1 C 0 C 0 s aotNan1.NW_018501968v1 1098545 32 - 2246441 ACTCTTTCTTCACTGTAAGAA------TTTTCCCCCGT----- i aotNan1.NW_018501968v1 C 0 C 0 s canFam3.chr4 37127223 43 + 88276631 ACTCTTCCTTCACTGCAGGATGTCTCCCTTCCCCCTGAAAATT i canFam3.chr4 C 0 C 0 e proCoq1.NW_012152163v1 692986 56 - 940639 I e dasNov3.JH562710 207994 60 - 960158 I a score=1593577.000000 s hg38.chr5_KI270795v1_alt 5589 462 + 131892 CCCTCTACACATCCTGTCATCTCTGGCATTACTATTTATGGCCTGATTCTGCCTTGAATGACCCTGAAGTCCCCAA-GACTCACATGTGTAAAAAAT----TTCTT---AGTTTGAT--TTTG-------ATCAGCTCCTAAGAGAGAATTTCTAGGTGAGAGAAGGAACTGTAAAAACGGTCCATCAActgcattcttc-aaaaatgttgatgtcataataggcacagaaatgctggggaacctttatagattcaaggagactaaggacatataataactaa--atatagtatgaggttctagactggaacatgtactgaaagaaaagaatgctataaagaacatttctggctaaattgacacaaatgaaatacagacagtagattaaataaaattccatgtttctgttcaatttaccaacatcgataactatactgggggtaggaaacagaacatcctatttcttaggaaat----actgaaat s panTro5.chr5 5254214 462 - 181907262 ACCTCTACACATCCTGTCATCTCTGGCATTACTATTTATGGCCTGATTCTGCCTTGAATGACCCTGAAGTCCCCAA-GACTCACATGTGTAAAAAAA----TTCTT---AGTTTGAG--TTTG-------ATCAGCTCCTAAGAGAGAATTTCTAGGTGAGAGAAGGAACTGTAAAAATGGTCCATCAActgcattcttc-aaaaatgttgatgtcataataggcacagaaatgctggggaacttttatagactcaaggagactaaggacatataataactaa--atatagtatgaggttctagactggaacatgtactgaaagaaaagaatgctataaagaacatttctggctaaattgacacaaataaaatacagacagtagattaaataaaattccatgtttctgttcaatttaccaacatcgataactatactgggggtaggaaacagaacatcctatttcttaggaaat----actgaaat i panTro5.chr5 C 0 C 0 s panPan2.chr5 5516600 462 - 183735486 ACCTCTACACATCCTGTCATCTCTGGCATTACTGTTTATGGCCTGATTCTGCCTTGAATGACCCTGAAGTCCCCAA-GACTCACATGTGTAAAAAAA----TTCTT---AGTTTGAG--TTTG-------ATCAGCTCCTAAGAGAGAATTTCTAGGTGAGAGAAGGAACTGTAAAAATGGTCCATCAActgcattcttc-aaaaatgttgatgtcataataggcacagaaatgctggggaacttttatagattcaaggagactaaggacatataataactaa--atatagtatgaggttctagactggaacatgtactgaaagaaaagaatgctataaagaacatttctggctaaattgacacaaataaaatacagacagtagattaaataaaattccatgtttctgttcaatttaccaacatcgataactacactgggggtaggaaacagaacatcctatttcttaggaaat----actgaaat i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1614174 462 + 3967317 CCCTCTACACATCCTGTCATCTCTGGCATTACTATTTATGGCCTGATTCTGCCTTGAATGACCCTGAAGTCCCCAA-GACTCACATGTGTAAAAAAA----TTCTT---AGTTTGAG--TTTG-------ATCAGCTCCTAAGAGAGAATTTCTAGGTGAGAGAAGGAACTGTAAAAACGGTCCATCAActgcattcttc-aaaaatgttgatgtcataataggcacagaaatgctggggaacttttatagattcaaggagactaaggacatataataactaa--atatagtatgaggttctagactggaacatgtactgaaagaaaagaatgctataaagaacatttctggctaaattgacacaaataaaatacagacagtagattaaataaaattccatgtttctgttcaatttaccaacatcgataactatactgggggtaggaaacagaacatcctatttcttaggaaat----actgaaat i gorGor5.CYUI01015413v1 C 0 C 0 s chlSab2.chr23 4706003 462 - 82825804 CCCTCTACACATCCTGTCATCTCTTGCATTACTATTTATGGCCTGATTCTGCCTTGAATGACCCTGAAGTCCCCAA-GACTCACATGTGTAAAAAAA----TTCTT---AGTTTGAG--TTTG-------ATCAGCTCCTAAGAGAGAATTTCTGGGTGAGAGAAGGAACTGTAAAAATGGTCCATCAActgcattcttc-aaaaatgttgatgtcgtaataggcacagaaatgctggggaacttttatagattcaaggagactaaggacatataataactaa--atatagtatgaggttctagactggaacatgtactgaaggaaaagaatgctataaagaacatttctggctaaattgacacaaatacaatacagacagtagattaaataaaattccatgtttctgttcaatttaccaacatcgataactatactgggggtaggaaacagaacatcctatttcttagaaaat----actgaaat i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 201268 464 + 2521317 CCCTCTACACATCCTGTCATCTCTGACATTACTATTTATGGCCTGATTCTGCCTTGAATGACCCTGAAGTCCCCAA-GACTCACATGTGTAAAAAAA----TTCTT---AGTTTGAG--TTTG-------ATCAGCTCCTAAGAGAGAATTTCTGGGTGAGAGAAGGAACTGTAAAAATGGTCCATCAActgcattcttc-aaaaatgttgatgtcataataggcacagaaatgctggggaacttttatagattcaaggagactaaggacatataataactaaatatatagtatgaggttctagactggaacatgtactgaaggaaaagaatgctataaagaacatttctggctaaattgacacaaatacaatacagacagtagattaaataaaattccatgtttctgttcaatttaccaacatcgataactagactgggggtaggaaacagaacatcctatttcttagaaaat----actgaaat i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1691934 462 - 2415367 CCCTCTACACATCCTGTCATCTCTGGCATTACTATTTATGGCCTGATTCTTCCTTGAATGACCCTGAAGTCCCCAA-GACTCACATGTGTAAAAAAA----TTCTT---AGTTTGGG--TTTG-------ATTATCTCCTAAGAGAGAATTTCTGGGTGAGAGAAGGAACTGTAAAAATGGTCCATCAActgcattcttc-aaaaatattgatgtcataataggcacagaaatgctggggaacttttatagattcaaggagactaaggacatataataactaa--atatagtatgaggttctagactggaacatgtactgaaagaaaagaatgctataaagaacatttctggctaaactgatacaaatacaatacagacagtagattaaataaaattccatgtttctgttcaatttaccaacatcgataactatactgggggtaggaaacagaatatcctatttcttagaaaat----actgaaat i colAng1.NW_012115755v1 C 0 C 0 s aotNan1.NW_018501968v1 1098577 460 - 2246441 CCCTTTACACATCCTGTCATCTCTGGCATTACTATTTATGGCCTGATTCTGCCTTGAATGACCGTAAAGCCCCCAA-GACTCACATGTGTAAAAAAT--CCTTCGT---AGTTTAAG--TTTG-------ATCAGCTCCTAAGAGAGAATTTCTGGGTGACAGAAGGAGCTATAAAAATGGTCCATCAActgcattcttc-aaaaatgttgatgtcataataggcacagaaatgctggggaagttttatagatttaaggagactaaggacatgtaataactaa--atatagtatgaggttctagactggaacatgtactgaaagaaaagaatgccataaagaacatttttggctaaactgacacgaataaaat----agagtagattaaataaaattccatgtttctgttcaatttgccaacattgataactatactgggggtaggaaacagaacatcctatattttaggacat----actgaaat i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 693042 467 - 940639 CCCTCTACACATCCTATCATCTCTGGCATTACTATTTATGACCTCATTCTGCCTTGAATGACCCTAAAGGTCCCAA-GATTC---TGTGTAACAAAAATCCTTCAG---AGTCGGAG--TTTG-------ATCAGCTCCTAAAAGAGAATTTTTGGGTGAGAGAAGGAACTATAAAAATGGTCCATCAActgtattcttc-aaacaagtcaatgttgtattaggaacagaaatgctggggaacttttatagattcaaggagattggggagacatgataactaa--atacagtatgaagttctagattggatcctatactggaagtaaagaatgctataaaggacatttctgactaaatcaacacaattgaaatacagacagtagattagataaaacttcatgttagtgttcaatttaccaaggttgataactatactgggggtaagaaacagaatatcctttttcttaggaaatattcactgaaat i proCoq1.NW_012152163v1 I 56 C 0 s canFam3.chr4 37127266 463 + 88276631 CCCTCTATACAGCCTCACATCTCTGGTGTTATTATTTATGTCCTGATTCTGCCCTGAGTGACCCTAAAAATCCTAATTACACCGATATATAAAAATA----TTCTTTGGAGTTTGAGCATTTGAGCAAAAATCAGCCCCTGAAAGAGAATTTCT-GGTGACA-AAGGGGGTATAATAATAG---ATCAActatagtcttcaaaaaatgtgaatatcccaatagttacagaaatgctgagggatttttatagattcaaggacactaaggagacatgataactta--atacagtatcagatcctagactagatcctgaactggag-----aaatgctctaaaggatattactggctaaattgacataattgaaatatagacagtagatt-----aaattctttgttactaacca--ttaccagagatgataactatattggggataggaaacaaaatatccttgttcttaggaaatattcactgaaaa i canFam3.chr4 C 0 C 0 e dasNov3.JH562710 207994 60 - 960158 I a score=31355.000000 s hg38.chr5_KI270795v1_alt 6051 7 + 131892 atttagg s panTro5.chr5 5254676 7 - 181907262 atttagg i panTro5.chr5 C 0 C 0 s panPan2.chr5 5517062 7 - 183735486 atttagg i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1614636 7 + 3967317 atttagg i gorGor5.CYUI01015413v1 C 0 C 0 s macFas5.chr6 5891504 7 - 181584905 attcagg i macFas5.chr6 N 0 I 3 s chlSab2.chr23 4706465 7 - 82825804 atttagg i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 201732 7 + 2521317 atttagg i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1692396 7 - 2415367 atttaga i colAng1.NW_012115755v1 C 0 C 0 s aotNan1.NW_018501968v1 1099037 7 - 2246441 atttagg i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 693509 7 - 940639 atttagg i proCoq1.NW_012152163v1 C 0 C 0 s canFam3.chr4 37127729 7 + 88276631 atttatg i canFam3.chr4 C 0 C 0 e dasNov3.JH562710 207994 60 - 960158 I a score=185488.000000 s hg38.chr5_KI270795v1_alt 6058 27 + 131892 ggtaaagggtaa-gatgtatgcaactta s panTro5.chr5 5254683 27 - 181907262 ggtaaagggtaa-gatgtatgcagctta i panTro5.chr5 C 0 C 0 s panPan2.chr5 5517069 27 - 183735486 ggtaaagggtaa-gatgtatgcagctta i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1614643 27 + 3967317 ggtaaagggtaa-gatgtatgcaactta i gorGor5.CYUI01015413v1 C 0 C 0 s rheMac8.chr6 5699717 27 - 180051392 GGTAAAGGGTAA-GATGTACACAACTCA i rheMac8.chr6 N 0 C 0 s macFas5.chr6 5891514 27 - 181584905 ggtaaagggtaa-gatgtacacaactca i macFas5.chr6 I 3 C 0 s macNem1.NW_012018466v1 920590 27 - 16193990 GGTAAAGGGTAA-GATGTACACAACTCA i macNem1.NW_012018466v1 N 0 C 0 s cerAty1.NW_012007035v1 1737617 27 - 21434487 GGTAAAGGGTAA-GATGTACACCACTTA i cerAty1.NW_012007035v1 N 0 C 0 s chlSab2.chr23 4706472 27 - 82825804 ggtaaagggtaa-gatgtacacaactta i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 201739 27 + 2521317 ggtaaagggtaa-gatgtacacaactta i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1692403 27 - 2415367 ggtaaaggataa-gatgtacacaactta i colAng1.NW_012115755v1 C 0 C 0 s aotNan1.NW_018501968v1 1099044 27 - 2246441 ggtaaagggtaa-gatatatgcaactta i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 693516 28 - 940639 ggtaaagggtaatgacgtatgcaattta i proCoq1.NW_012152163v1 C 0 C 0 s canFam3.chr4 37127736 28 + 88276631 ggtaaagtataataatatatgcaactta i canFam3.chr4 C 0 I 18 e dasNov3.JH562710 207994 60 - 960158 I a score=7800.000000 s hg38.chr5_KI270795v1_alt 6085 1 + 131892 c s panTro5.chr5 5254710 1 - 181907262 c i panTro5.chr5 C 0 C 0 s panPan2.chr5 5517096 1 - 183735486 c i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1614670 1 + 3967317 c i gorGor5.CYUI01015413v1 C 0 C 0 s rheMac8.chr6 5699744 1 - 180051392 C i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5891541 1 - 181584905 c i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 920617 1 - 16193990 C i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1737644 1 - 21434487 C i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4706499 1 - 82825804 c i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 201766 1 + 2521317 c i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1692430 1 - 2415367 c i colAng1.NW_012115755v1 C 0 C 0 s aotNan1.NW_018501968v1 1099071 1 - 2246441 c i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 693544 1 - 940639 c i proCoq1.NW_012152163v1 C 0 I 49 e canFam3.chr4 37127764 18 + 88276631 I e dasNov3.JH562710 207994 60 - 960158 I a score=1298005.000000 s hg38.chr5_KI270795v1_alt 6086 241 + 131892 aatgtgataggtcttggatttgtgtccctgagaaaatttccaattgtaaaccccagtgttggaggaggggcctggtgagaggtgactggatcatcggagcgaattt-cccccttgctgttctcgttacagtgactgagttcttatgacatctggctgtttaaaagtatgtggcacctccctgtctctctgtttcctgagacctgcccagccatgcttcctgtacagcctatggaaccacgag s panTro5.chr5 5254711 241 - 181907262 aatgtgatatgtcttggatttgtgtccctgagaaaatttccaattgtaaaccccagtgttggaggaggggcctggtgagaggtgattggatcatcggagcgaattt-cccccttgctgttcttgttacagtgactgagttcttatgacatctggctgtttaaaagtatgtggcacctccctgtctctctgtttcctgagacctgcccagccatgcttcctgtacagcctatggaaccacgag i panTro5.chr5 C 0 C 0 s panPan2.chr5 5517097 241 - 183735486 aatgtgatatgtcttggatttgtgtccctgagaaaatttccaattgtaaaccccagtgttggaggaggggcctggtgagaggtgattggatcatcggagcgaattt-cccccttgctgttcttgttacagtgactgagttcttatgacatctggctgtttaaaagtatgtggcacctccctgtctctctgtttcctgagacctgcccagccatgcttcctgtacagcctatggaaccacgag i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1614671 241 + 3967317 aatgtgatgtgtcttggatttgtctccctgagaaaatttccaattgtaaaccccagtgttggaggaggggcctggtgagaggtgactgaatcaccggagcgaattt-cccccttgctgttctcgttacagtgactgagttcttatgacatctggctgtttaaaagtatgtggcacctccctgtctctctgtttcctgagacctgcccagccatgcttcctgtacagcctatggaaccacgag i gorGor5.CYUI01015413v1 C 0 C 0 s rheMac8.chr6 5699745 239 - 180051392 AATTtgatatgtcttggatttgtgtccctgacaaaatctccagttgtaatccccagtgttggaggaggggcctggtgagaggtgattggatcattggagcgaattt-ccctcttgctgttcttgtt--agtgactgaattcttatgacatctggttgtttaaaagtgtgtagtacctccccgtctctctgtttcctggggcctgcccagtcatgcttcctttacagcctatggaaccacgag i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5891542 239 - 181584905 aatttgatatgtcttggatttgtgtccctgacaaaatctccagttgtaatccccagtgttggaggaggggcctggtgagaggtgattggatcattggagcgaattt-ccctcttgctgttcttgtt--agtgactgaattcttatgacatctggttgtttaaaagtgtatagtacctccccgtctctctgtttcctggggcctgcccagtcatgcttcctttacagcctatggaaccacgag i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 920618 239 - 16193990 AATTtgatatgtcttggatttgtgtccctgacaaaatctccagttgtaatccccattgttggaggaggggcctggtgagaggtgattggatcattggagcgaattt-ccctcttgctgttcttgtt--agtgactgaattcttatgacatctggttgtttaaaagtgtgtagtacctccccgtctctctgtttcctggggcctgcccagtcatgcttcctttacagcctatggaaccacgag i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1737645 239 - 21434487 AATTtgatatgtcttggatttgtgtccctgacaaaatctccaattgtaatccccagtgttggaggaggggcctggtgagaggtgaatggatcattggagcgaattt-cccccttgctgttcttgtt--agtgactgaattcttatgacatctggttgtttaaaagtgtgtagtacctccccgtctctctgtttcctggggcctgcccagtcatgcttcctttacagcctatggaaccacgag i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4706500 239 - 82825804 aatttggtatgtcttggatttgtgtccctgacaaaatctccaatggtaatccccagtgttggaggaggggcctggtgagaggtgattggatcatcggagtgaattt-cccccttgctgttcttgtt--agtgactgagttcttatgacatctggttgtttaaaagtgtgtagtacctccccgtctctctgtttcctgaagcctgcccagccatgcttcctgtacagcctatggaaccacgag i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 201767 239 + 2521317 aatttggtatgtcttggatttgtgtccctgacaaaatctccagttgtaatccccagtgttggaggaggggcctggtgagaggtgattggatcatcggagcaaattt-ctcccttgctgttcttgtt--agtgactgagttcttatgacatctggttgtttaaaagtgtgtggtacctcgccgtctctctgtttcctgaagcctgcccagccatgcttcctgtacagcctatggaaccacgag i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1692431 239 - 2415367 AATTtgatatgtcttggatttgtgtccctgacaaaatctccaattgtaatacccagtgttgggggaggggcctggtgagaggtgattggatcatcggaacgaatttccccccttgctgttcttgtt--agtgactgagttcttatgacatctggttatttaaaagtgtgtggtacctcgccgtctctctgtttcctgaggcctgcctagccatgcttcctg-acagcctatggaaccaggag i colAng1.NW_012115755v1 C 0 C 0 s aotNan1.NW_018501968v1 1099072 227 - 2246441 aatttgatatgtcttggatttgtgtccctgccgaaatctccagctgtaatccccaatgttgga----------ggtgagaggtgattggatcatgggcgtgaattt-ccctcttgctgttcttgttacagtgactgagttcttatgacatctggttgtttagaagtgcgtagcactgcctc----ctctgtttcctgaggcctccccagccatgcttcctgtacagcctgtggaaccacaag i aotNan1.NW_018501968v1 C 0 C 0 e canFam3.chr4 37127764 18 + 88276631 I e proCoq1.NW_012152163v1 693545 49 - 940639 I e dasNov3.JH562710 207994 60 - 960158 I a score=892680.000000 s hg38.chr5_KI270795v1_alt 6327 250 + 131892 ccaattaaacctc---------------tttttttttttttttttttttttttttttgagacagctttttgctctgtagcccaggctggagtgcagtggtgc-aatctaggctcactgcaagctccgcctcccgggttcacaccattctcctgcctcagccttccaagtagctgggactacaggcgcccgccaccacgcccggctaatttgattatattttaagtagagacgaggtttcaccatcttggccaggctggtcttgaac s panTro5.chr5 5254952 237 - 181907262 ccagttaaacctc---------------tttttttttttttttt-------------gagacagcttcttgctctgtagcccaggctagagtgcagtggtgt-gatctaggctcactgcaagctccgcctcccgggttcacgccattctcctgcctcagccttccgagtagctgggactacaggcgcccgccaccacgcccggctaattttattatattttaagtagagacgaggtttcaccatcttggccaggctggtcttgaac i panTro5.chr5 C 0 C 0 s panPan2.chr5 5517338 244 - 183735486 ccagttaaacctt---------------cttttttttttttttt------tttttttgagacagcttcttgctctgtagcccaggctagagtgcagtggtgc-gatctaggctcactgcaaactccgcctcccgggttcacgccattctccttcctcagccttccgagtagctgggactacaggcgcccgccaccacgcccggctaattttattatattttaagtagagacgaggtttcaccatcttggccaggctggtcttgaac i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1614912 244 + 3967317 ccaattaaacctc---------------tttttttttttatttt-----tattttttgagacagcttcttgctctgtagcccaggctggagtgcagtggtgc-gatctaggctcactgcaagctccgcctcccgggttcacgccattctcctgcctcagccttcccagtagctgggactacaggcacccgccaccacgcccggctaattt-attatattttaagtagagacgaggtttcaccatcttggccaggctggtcttgaac i gorGor5.CYUI01015413v1 C 0 C 0 s rheMac8.chr6 5699984 230 - 180051392 ccaattaaacctctttttttgttttgttttttttttttgttttt-------------gagacagcgcctggctctgtagcccaggctggagtgca----------------------gcaacctccgcctcccgggttcaagcaattct-ctgcctcagccttctgagtagctgggattataggcacccaccactacgcctggctaattttattgtatttttagtagagacgaggtttcaccatcttggccaggctggccttgaac i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5891781 227 - 181584905 ccaattaaacctctttttttgttttg---tttttttttgttttt-------------gagacagcgcctggctctgtagcccaggctggagtgca----------------------gcaacctccgcctcccgggttcaagcaattct-ctgcctcagccttctgagtagctgggattataggcacccaccaccacgcctggctaattttattgtatttttagtagagacgaggtttcaccatcttggccaggctggccttgaac i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 920857 228 - 16193990 ccaattaaacctctttttttgttttg--ttttttttttgttttt-------------gagacagcgcctggctctgtagcccaggctggagtgca----------------------gcaacctccgcctcccgggttcaagcaattct-ctgcctcagccttctgagtagctgggattataggcacccaccaccacgcctggctaattttattgtatttttagtagagacgaggtttcaccatcttggccaggctggccttgaac i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1737884 215 - 21434487 ccaattaaacctc---------------attttttttttttttt-------------gagacagcacctggctctgtagcccaggctggagtgca----------------------gcaacctctgcctcccgggttcaagcaattct-ctgcctcagcctcctgagtagctgggattataggcacccaccaccacgcccggctaattttattgtatttttagtagagacgaggtttcaccatcttggccaggctggccttgaac i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4706739 227 - 82825804 ccaattaaacctc------------------------ttttttt-------------gaggcagcgtctcgccgtgtagcccaggctggagtgcagtggtgc-gatctcggctcatagcaacctccgcctcctgggttcaagcaattct-ctgcctcagcctcctgagtagctgggattacaggcgaaaaccaccatgcctggctaattttattgtatttttagtagagatgaggtttcaccatcttggccaggctggccttgaac i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 202006 229 + 2521317 ccaattaaacctc----------------------ttttttttt-------------gaggcagcatctcgctgtgtagcccaggctggagtgcagtggtgc-gatctcggctcactgcaacctgcgcctcctgggttcaagcaattct-ctgcctcagcctcctgagtagctgggattacaggcgaaaaccaccatgcctggctaattttattgtatttttagtagagatgaggtttcaccatcttggccaggctggccttgaac i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1692670 229 - 2415367 ccaattaaacctc----------------------ttttttttt-------------gagacagtgtctcgctctgtagcccaggctggagtgcagtggtgcggatcttggctcactgcaacctctgcctcctgggttcaagcaattct-ctgcctcagcctcctgagtagctggaactacaggcacacgccaccatgcccggctaattttattgtattttt-gtagagaccaggtttcaccatcttggccaggctggccttgaac i colAng1.NW_012115755v1 C 0 M 1250 e canFam3.chr4 37127764 18 + 88276631 I e proCoq1.NW_012152163v1 693545 49 - 940639 I e dasNov3.JH562710 207994 60 - 960158 I e aotNan1.NW_018501968v1 1099299 0 - 2246441 C a score=284695.000000 s hg38.chr5_KI270795v1_alt 6577 73 + 131892 tcctgacctcgtgatccacccgccttgacctcccaaagtgctggaattacaggtgtgagccaccgtgcctggc s panTro5.chr5 5255189 73 - 181907262 tcctgacctcgtgatccacccgccttgacctcccaaagtgctggaattacaggtgtgagccaccgcgcctggc i panTro5.chr5 C 0 C 0 s panPan2.chr5 5517582 73 - 183735486 tcctgacctcgtgatccacccgccttgacctcccaaagtgctggaattacaggtgtgagccaccgcgcctggc i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1615156 73 + 3967317 tcctgacctcgtgatccacccgccttgacctcccaaagtgctggaattacaggtgtgagccaccgcgcctggc i gorGor5.CYUI01015413v1 C 0 C 0 s rheMac8.chr6 5700214 73 - 180051392 tcctgacctcatgatccacccgccttggcctcccaaatttctgggattacaggtgtgagccaccgcgcctggc i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5892008 73 - 181584905 tcctgacctcatgatccacctgccttggcctcccaaatttctgggattacaggtgtgagccaccgcgcctggc i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 921085 73 - 16193990 tcctgacctcatgatccacccgccttggcctcccaaatttctgggattacaggtgtgagccaccacgcctggc i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1738099 73 - 21434487 tcctgacctcatgatccacccgccttggcctcccaactttctgggattacaggtgtgagccactgcgcctagc i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4706966 73 - 82825804 tcctgacctcgtgatccacccgccttggtctcccaaagttctaggattacaggcgtgagccaccgcgcctggc i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 202235 73 + 2521317 tcctgaccttgtgatccacccgccttggcctcccaaagttctgggattacaggcgtgagccaccgcgcctggc i manLeu1.NW_012103943v1 C 0 C 0 e canFam3.chr4 37127764 18 + 88276631 I e proCoq1.NW_012152163v1 693545 49 - 940639 I e dasNov3.JH562710 207994 60 - 960158 I e aotNan1.NW_018501968v1 1099299 0 - 2246441 C e colAng1.NW_012115755v1 1692899 1250 - 2415367 M a score=1928780.000000 s hg38.chr5_KI270795v1_alt 6650 414 + 131892 ccaattaaacctcttttctttataaattacccagtctcaggtagttccctatagcaatgtgagaacggactaatgcacaattgccaaatgtttagacaaaagagtagtaacgtagatatatgtagagaaagcaaatggaggctgggcacagtgactcaggcctgtaatctcagcactttgggaggccaaggcggg---------tgaggccaggagtttgagaccagcctggccaacatggagaaactccatctctacaaaacatacaaaaaattagcgggtgtgggggtgcacgcctgtaatcccagctactcaggtggctgagacatgagaatcgcttgaacctgggaagcggaggttgcagtaagccaagatcgcgccactgcactccagcctgggtgacagagtaagactgtgtctcaa s panTro5.chr5 5255262 414 - 181907262 ccaattaaacctcttttctttataagttacccagtctcgggtagttccctatagcaatgtgagaacggactaatgcacaattgccaaatgtttagacaaaagagtagtaacgtagatatatgtagagaaagcaaatggaggctgggcgcagtgactcaggcctgtaatctcagcactttgggaggccaaggtggg---------tgaggccaggagtttgagaccagcctggccaacatggagaaactccatctctacaaaacatacaaaaaattagcaggtgtgggggtgcacgcctgtaatcccagctactcaggtggctgagacatgagaatcgcttgaacctgggaagcggaggttgcagtgagccaagatcgcgccactgcactccagcctgggtaacagagtaagactgtgtctcaa i panTro5.chr5 C 0 C 0 s panPan2.chr5 5517655 414 - 183735486 ccaattaaacctcttttctttataagttacccagtctcaggtagttccctatagcaatgtgagaacggactaatgcacaattgccaaatgtttagacaaaagagtagtaacgtagatatatgtagagaaagcaaatggaggctgggcgcagtgactcaggcctgtaatctcagcactttgggaggccaaggtgag---------tgaggccaggagtttgagaccagcctggccaacatggagaaactccatctctacaaaacatacaaaaaattagcgggtgtgggggtgcacgcctgtaatcccagctactcaggtggctgagacatgagaatcgcttgaacctgggaagcggaggttgcagtgagccaagatcgcgtcactgcactccagcctgggtaacagagtaagactgtgtctcaa i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1615229 412 + 3967317 ccaattaaac--cttttctttataaattacccagtctcaggtagttccctatagcaatgtgagaacagactaatgcacaattgccaaatgtttagacaaaagagtagtaacgtagatatatgtagagaaagcaaatggaggctgggcgcagtgactcaggcctgtaatctcagcactttgggaggccaaggcggg---------tgaggccaggagtttgagaccagcctggccaacatggagaaactccatctctataaaacatacaaaaaattagcgggtgtgggggtgcactcctgtaatcccagctactcaggtggctgagacatgagaatcgcttgaacctgggaagcggaggttgcagtgagccaagatcgtgccactgcactccagcctgggtgacagagtaagactgtgtctcaa i gorGor5.CYUI01015413v1 C 0 C 0 s rheMac8.chr6 5700287 422 - 180051392 ccaattaaacctcttttctttataaattacccagtctcaggtagttccctatagcaatgtgagaacggactaatgcaCAATTGCCAAACATTTAGACAAAAGAGTAGTAATGTAGATGTATGTAGAGAAAGCAAATGGAgaccgggtgcagtgactcatgcctgtaatctcagcactttgggaggccagggcaggtggatcacttgaggccaggagtttgagaccagcctggccaacatggagaaa-cccatctctacaaaacatacaaaaaattagtgggtgtggtggtgcacacctgtaatcccagctactcaggtggctgagacatgagaatcacttgaatctgggaagcggaggttgcagtgagccaagagtgcgtcactgcgttccagcctgggcaacagagtaagactgtgtctcaa i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5892081 422 - 181584905 ccaattaaacctcttttctttataaattacccagtctcaggtagttccctatagcaatgtgagaatggactaatgcacaattgccaaacatttagacaaaagagtagtaatgtagatgtatgtagagaaagcaaatggagaccgggtgcagtgactcatgcctgtaatctcagcactttgggaggccagggcaggtggatcacttgaggccaggagtttgagaccagcctggccaacatggagaaa-cccatctctacaaaacatacaaaaaattagtgggtgtggtggtgcacacctgtaatcccagctactcaggtggctgagacatgagaatcacttgaatctgggaagcggaggttgcagtgagccaagagtgcgtcactgcgttccagcctgggcaacagagtaagactgtgtctcaa i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 921158 422 - 16193990 ccaattaaacctcttttctttataaattacccagtctcaggtagttccctatagcaatgtgagaacggactaatgcaCAATTGCCAAACATTTAGACAAAAGAGTAGTAATGTAGATGTATGTAGAGAAAGCAAATGGAgaccgggtgcagtgactcatgcctgtaatctcagcactttgggaggccagggcaggtggatcacttgaggccaggagtttgagaccagcctggccaacatggagaaa-cccatctctacaaaacatacaaaaaattagtgggtgtggtggtgcacacctgtaatcccagctactcaggtggctgagacatgagaatcacttgaatctgggaagcggaggttgcagtgagccaagagtgcgtcactgcgttccagcctgggcgacagagtaagactgtgtctcaa i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1738172 422 - 21434487 ccaattaaacctcttttctttataaattacccagtctcaggtagttccctatagcaatgtgagaacggactaatgcaCAATTGCCAAACATTTAGACAAAAGAGTAGTAATGTAGATGTATGTAGAGAAAGCAAATGGAgaccgggtgcagtgactcatgcctataatctcagcactttgggaggccagggcaggtggatcacttgaggccaggagtttgagaccagcctggccaacatggagaaa-cccatctttacaaaacatacaaaaaattagtgggtgtggtggtgcacacctgtaatcccagctactcaggtggctgagacatgagaatcgcttgaacctgggaagcggaggttgcagtgagccaagattgcgtcactgcattccagcctgggtgacagagtaagactgtgtctcaa i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4707039 423 - 82825804 ccaattaaacctcttttctttataaattacccagtctcaggtagttccctatagcaatgtgagaacggactaatgcacaattgccaaacgtttagacaaaagagtagtaatgtagatgtatgtagagaaagcaagtggagaccgggcgcagtgactcatgcctgtaatctcagcactttgggaggccaggtcaggtgaattgcttgaggccaggagtttgagaccagcctggccaacatggagaaaccccatctatgcaaaacatacaacaaattagcgggtagggtggtgcatgactgtaatcccagctactcaggtggctgaggcatgagaattgcttgaacctgggaagtggaggttgcagtgagccaagatcgcaccactgcactccagcctgggtgacagagtaagactgtgtctcaa i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 202308 423 + 2521317 ccaattaaacctcttttctttataaattacccagtctcaggtagttccctatagcaatgtgagaacggactaatgcacaattgccaaacgtttagacaaaagagtagtaatgtagatgtatgtagagaaagcaagtggagaccgggcgcagtgactcatgcctgtaatctcagcactttgggaggccaggtcaggtgaattgcctgaggccaggagtttgagaccagcctggccaacatggagaaaccccatctctgcaaaacatacaaaaaattagcgggtagggtggtgcatgactgtaatcccagctactcaggtggctgaggcatgagaattgcttgaacctgggaagtggaggttgcagtgagccaagatcgcaccactgcactccagcctgggtgacagagtaagactgtgtctcaa i manLeu1.NW_012103943v1 C 0 C 0 s aotNan1.NW_018501968v1 1099299 408 - 2246441 ccaattaaacctcttttctttataaattacccagtctcaggtagttctctatagcaatgtgagaagagactaatacaaaagtgccaaat-tttagacaaaagagtagtaatgtagatgtatgtagagaaagcaaatggaggccaggcgcagtgactcatgcctgtaatcccagcactttgtgaggccaag-tgggtggatcacttgacgccaggagtttgaga-cagcctggccaacatggagaaaccccatctccacaaaacatacaaaaaattagtgggtgttgtggtgcacgcctgtaatcccagcaactcaggcggctgagacgtgagaatccctcgaacctggggagcagaggtt------------gatcgtgccactgtattccagcctgggagacagagtaaggctctgtctcaa i aotNan1.NW_018501968v1 C 0 C 0 e canFam3.chr4 37127764 18 + 88276631 I e proCoq1.NW_012152163v1 693545 49 - 940639 I e dasNov3.JH562710 207994 60 - 960158 I e colAng1.NW_012115755v1 1692899 1250 - 2415367 M a score=115139.000000 s hg38.chr5_KI270795v1_alt 7064 42 + 131892 aa----------------------------aaataaataaataaaaat--aaaactaaaaaaagaaaaaaag s panTro5.chr5 5255676 42 - 181907262 aa----------------------------aaataaataaataaaaat--aaagctaaaaaaagaaaacaag i panTro5.chr5 C 0 C 0 s panPan2.chr5 5518069 42 - 183735486 aa----------------------------aaataaataaataaaaat--aaaactaaaaaaagaaaacaag i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1615641 42 + 3967317 aa----------------------------aaataaataaataaaaat--aaaactaaaaaaagaaaacaag i gorGor5.CYUI01015413v1 C 0 C 0 s rheMac8.chr6 5700709 44 - 180051392 aat---------------------------aaagaaataaataaaaata-aaaaTAAAAAAAAGaaaagaaa i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5892503 44 - 181584905 aat---------------------------aaagaaataaataaaaata-aaaataaaaaaaagaaaagaaa i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 921580 44 - 16193990 aat---------------------------aaagaaataaataaaaata-aaaaTAaaaaaaagaaaagaaa i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1738594 44 - 21434487 aat---------------------------aaagaaataaataaaaata-aaaaTAaaaaaaagaaaagaaa i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4707462 70 - 82825804 aataaataaataaataaataaataaataaaaaataaataaataaaaatt-aaaatttaaaaaagaaaa-aaa i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 202731 52 + 2521317 aataaataaat-------------------aaataaataaataaaaatt-aaaattaaaaaaagaaaacaaa i manLeu1.NW_012103943v1 C 0 C 0 s aotNan1.NW_018501968v1 1099707 27 - 2246441 aa----------------------------aaa-----------------aaaagaaaaaaagaaaaaaaaa i aotNan1.NW_018501968v1 C 0 C 0 s canFam3.chr4 37127782 42 + 88276631 ------------------------------aaatatatgtatatgtatatgcatatgtatatggaaaacaaa i canFam3.chr4 I 18 C 0 e proCoq1.NW_012152163v1 693545 49 - 940639 I e dasNov3.JH562710 207994 60 - 960158 I e colAng1.NW_012115755v1 1692899 1250 - 2415367 M a score=21126.000000 s hg38.chr5_KI270795v1_alt 7106 3 + 131892 tgg s panTro5.chr5 5255718 3 - 181907262 tgg i panTro5.chr5 C 0 C 0 s panPan2.chr5 5518111 3 - 183735486 tgg i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1615683 3 + 3967317 tgg i gorGor5.CYUI01015413v1 C 0 C 0 s rheMac8.chr6 5700753 3 - 180051392 tgg i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5892547 3 - 181584905 tgg i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 921624 3 - 16193990 tgg i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1738638 3 - 21434487 tgg i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4707532 3 - 82825804 tgg i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 202783 3 + 2521317 tgg i manLeu1.NW_012103943v1 C 0 C 0 s aotNan1.NW_018501968v1 1099734 3 - 2246441 tgg i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 693594 3 - 940639 tgg i proCoq1.NW_012152163v1 I 49 C 0 s canFam3.chr4 37127824 3 + 88276631 tga i canFam3.chr4 C 0 C 0 e dasNov3.JH562710 207994 60 - 960158 I e colAng1.NW_012115755v1 1692899 1250 - 2415367 M a score=1664220.000000 s hg38.chr5_KI270795v1_alt 7109 259 + 131892 aacaaaatgctacaattcggtgaatctgtgtcacagg---aatagcagtgctttttactattcttgcaacttttctgtaaatttga---atttttccaaataaaaaGTTTT-AAAAAATGGCCCATGACTCT--GT-TCCCCTCAATTTTATCTCCCCTTTGAGAGACTCTGACTTTAGTCTCAACATTGCCCCCAGATGTGTGCTAGTCCAACTTGAAA--TGTTATACCAGTTTCTGTCTCAGGCAAGAGCAGTCG-GATATACT--TATCA s panTro5.chr5 5255721 261 - 181907262 aacaaaatgctgcaactcggtgaatctgtgtcacagg---aatagcagtgctttttagtattcttgcaacttttctgtaaatttga---atttttccaaataaaaagtttt-aaaaaaTGGCCCATGACTCTCTGT-TCCCCTCAATTTTATCTCCCCTTTGAGAGACTCTGACTTCAGTCTCAACATTGCCCCCAGATGTGTGCTAGTCCAACTTGAAA--TGTTATACCAGTTTCTGTCTCAGGCAAGAGCAGTTG-GATATACT--TATCA i panTro5.chr5 C 0 C 0 s panPan2.chr5 5518114 259 - 183735486 aacaaaatgctgcaactcggtgaatctgtgtcacagg---aatagcagtgctttttagtattcttgcaacttttctgtaaatttga---atttttccaaataaaaagtttt-aaaaaaTGGCCCATGACTCT--GT-TCCCCTCAATTTTATCTCCCCTTTGAGAGACTCTGACTTCAGTCTCAACATTGCCCCCAGATGTGTGCTAGTCCAACTTGAAA--TGTTATACCAGTTTCTGTCTCAGGCAAGAGCAGTCG-GATATACT--TATCA i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1615686 259 + 3967317 aacaaaatgctacaactcggtgaatctgtgtcacagg---aatagcagtgctttttagtattcttgcaacttttctgtaaatttga---atttttccaaataaaaagtttt-aaaaaaTGGCCCATGACTCT--GT-TCCCCTCAATTTTATCTCCCCTTTGAGAGACTCTGACGTCAGTCTCAACATTGATCCCAGATGTGTGCTAGTCCAACTTGAAA--TGTTATACCAGTTTCTGTCTCAGGCAAGAGCAGTCG-GATATACT--TATCA i gorGor5.CYUI01015413v1 C 0 C 0 s rheMac8.chr6 5700756 259 - 180051392 aacaaaatgctaaaactcagtgaatctgtgtcacagg---aatagcagtgctttttagtattgttgtaacttttctgtaagtttga---atttttccaaataaaaaGTTTT-TAAAAATGGCCCATGACTCT--GT-TCCCCTAAATTTTATCTCCCCTTTGAGAGAATCTGACTTCAGTCTCACCATTGCCCCAATATGTGTGGTAGTCCAACTTGAAA--TGTTATACCAGTTTCTGTCTCAGGCAAGAGCAGTGG-GATATACT--TCTCA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5892550 259 - 181584905 aacaaaatgctaaaactcagtgaatctgtgtcacagg---aatagcagtgctttttagtattgttgtaacttttctgtaagtttga---atttttccaaataaaaaGTTTT-TAAAAATGGCCCATGACTCT--GT-TCCCCTAAATTTTATCTCCCCTTTGAGAGAGTCTGACTTCAGTCTCACCATTGCCCCAATATGTGTGGTAGTCCAACTTGAAA--TGTTATACCAATTTCTGTCTCAGGCAAGAGCAGTGG-GATATACT--TCTCA i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 921627 259 - 16193990 aacaaaatgctaaaactcagtgaatctgtgtcacagg---aatagcagtgctttttagtattgttgtaacttttctgtaagtttga---atttttccaaataaaaagtttt-taaaaaTGGCCCATGACTCT--GT-TCCCCTAAATTTTATCTCCCCTTTGAGAGAGTCTGACTTCAGTCTCACCATTGCCCCAATATGTGTGGTAGTCCAACTTGAAA--TGTTATACCAGTTTCTGTCTCAGGCAAGAGCAGTGG-GATATACT--TCTCA i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1738641 258 - 21434487 aacaaaatgctaaaactcggtgaatctgtgtcacagg---aatagcagtgctttttagtattgttgtaacttttctgtaaatttga---atttttccaaat-aaatgtttt-taaaaaTGGCCCATGACTCT--GT-TGCCCTAAATTTTATCTCCCCTTTGAGAGAGTCTGACTTCAGTCTCACCATTGCCCCAATATGTGTGGTAGTCCAACTTGAAA--TGTTATACCAGTTTCTGTCTCAGGCAAGAGCAGTGG-GATATACT--TCTCA i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4707535 259 - 82825804 aacaaaatgctaaaactcggtgaatctgtgtcacagg---aatagcagtgcttttcagtaatcttgcaacttttctgtaaatttga---atttttccaaataaaaaGTTTT-TAAAAATGGCCCATGACTCT--GT-TGCCCTAAATTTTATTTCCCCTTTGAGAGAGTCTGACTTCAGTCTCACCATTGCCCCAAGATGTGTGGTAGTCCAATTTGAAA--TGTTATACCAGTTTCTGTCTCAGGCAAGAGCAGTGG-AATATACT--TCTCA i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 202786 257 + 2521317 aacaaaatgct--aacttggtgaatctgtgtcacagg---aatagcagtgctttttagtattcttgcaacttttctgtaaatttga---atttttccaaataaaaaGTTTT-TAAAAATGGCCCATGACTCT--GT-TCCCCTAAATTTTATCTCCCCTTTGAGAGACTCTGACTTCAGTCTCACCATTGCCCCAAGATGTGTGGTAGTCCAATTTGAAA--TGTTATACCAGGTTCTGTCTCAGGCAAGAGCAGTGG-GATATACT--TCTCA i manLeu1.NW_012103943v1 C 0 C 0 s aotNan1.NW_018501968v1 1099737 260 - 2246441 aacaagatgctaaaactcggtgaatctgtgtcacagg---aatagtagtgctctttagtattcttgcaacttttctgtaaatttga---atttttccaaataaaaaGTTTT-AAAAAATAGCCCATGACTCT--GT-TCCCCTAAATTTTATCTTGCCTTTGAGAGTCTCTGATTTTAGTCTCACAATTA-CCCAAGATGTCTGCTAGTCCAGCTTGAAA--TGTTATACCAGATTCTGTCTCAGGCAAGCACAGTAG-GATATACTTATATCA i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 693597 259 - 940639 aacaaaacgctaaaactaggtgaatctgggttatagg---actagcagtgctctttagtattattgcaacctttctgtaaatttga---atttttccaaataaaaaGTTTA-AAAAAATGGTCCATGACTAT--GT-TTCCCTGAATTTTATCTTCCCTTTGAGAATCTCTGACTTTGGTCTCACAGTTGTCCACAGATGTGTGCTAGTCCAACTTGAAA--AGTTATATCAGGTTCCATCTCAGGCAAGAGCAGTGG-GACATACT--TATCA i proCoq1.NW_012152163v1 C 0 C 0 s otoGar3.GL873522 1192235 243 + 48283576 AAcaaaacactaaatctgggtgaatctggatcatatg---aatagcagtgctccttagtattcttgcaacttatctgtaaatttga---attttcccaaataaaaagtttt-aaaaaaTGGCCTATGACTCC--GT-TCTCC--------ATTTTCCC-----AAA----TGACTTTGGTTTCACTATTATCCCCAGATGTACGCTAATCTAACTTGAAA--AGTTCTATGAGGTTGAGTCTCTGGCAAGAGCTATGGAAATATACT--CATGA i otoGar3.GL873522 N 0 I 4 s canFam3.chr4 37127827 259 + 88276631 aacaaaatgctgaaactagat-aatctgggtagtaggtctaatagca----ttcttacta-tattgcaacttttctgtacatttgaTTTTTTTTTCCAAATATAAGTCTTTAAAAAAATGGCCCATGCCTCT--CTGTTCCCTGAATTTTATCTCTCCTTTGAGATTCTCTGGCTTCAGTC---ACATAGCCCCCACACATATACTATTCTAACTTCAAAACAGTTGTATCAGATTCTGTCTCAGTGAAAAGCAGAAG-GATACACT--TATC- i canFam3.chr4 C 0 C 0 e dasNov3.JH562710 207994 60 - 960158 I e colAng1.NW_012115755v1 1692899 1250 - 2415367 M a score=25212.000000 s hg38.chr5_KI270795v1_alt 7368 4 + 131892 CAAC s panTro5.chr5 5255982 4 - 181907262 CAAC i panTro5.chr5 C 0 C 0 s panPan2.chr5 5518373 4 - 183735486 CAAC i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1615945 4 + 3967317 CAAC i gorGor5.CYUI01015413v1 C 0 C 0 s rheMac8.chr6 5701015 4 - 180051392 CAAC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5892809 4 - 181584905 CAAC i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 921886 4 - 16193990 CAAC i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1738899 4 - 21434487 CAAC i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4707794 4 - 82825804 CAAC i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 203043 4 + 2521317 CAAC i manLeu1.NW_012103943v1 C 0 C 0 s aotNan1.NW_018501968v1 1099997 4 - 2246441 CAAC i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 693856 4 - 940639 CAAC i proCoq1.NW_012152163v1 C 0 C 0 e otoGar3.GL873522 1192478 4 + 48283576 I e canFam3.chr4 37128086 0 + 88276631 C e dasNov3.JH562710 207994 60 - 960158 I e colAng1.NW_012115755v1 1692899 1250 - 2415367 M a score=473929.000000 s hg38.chr5_KI270795v1_alt 7372 71 + 131892 TGAGTTTCTAACATCCATGTATACAGAATATAGAAAAGGAACACAAGGGGAAATTAAGTAAAAAACATACA s panTro5.chr5 5255986 71 - 181907262 TGAGTTTCTAACATCCATGTGTACAGAATATAGAAAAGGAACACAAGGGGAAATTaagtaaaaaacataca i panTro5.chr5 C 0 C 0 s panPan2.chr5 5518377 70 - 183735486 TGAGTTTCTAACATCCATGTGTACAGAATATAGAAAAGGAACACAAGGGGAAATTAAGT-AAAAACATACA i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1615949 71 + 3967317 TGAGTTTCTAACATCCACGTGTACAGAATATAGAAAAGGAACACAAGGGGAAATTAAGTAAAAAACATACA i gorGor5.CYUI01015413v1 C 0 C 0 s rheMac8.chr6 5701019 71 - 180051392 TGATGTTCTAACATCCATGTTTACAGAATATAGAAAAGGAACACAAGGGGAAATTAAGTAAAAAATATACA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5892813 71 - 181584905 TGATGTTCTAACATCCATGTTTACAGAATATAGAAAAGGAACACAAGGGGAAATTAAGTAAAAAATATACA i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 921890 71 - 16193990 TGATGTTCTAACATCCATGTTTACAGAATATAGAAAAGGAACACAAGGGGAAATTAAGTAAAAAATATACA i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1738903 71 - 21434487 TGATGTTCTAACATCCATGTTTACAGAATATAGAAAAGGAACACAAGGGGAAATTAAGTAAAAAGTATACA i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4707798 71 - 82825804 TGATATTCTAACATCCACGTTTACAGAATATAGAAAAGGAACACAAGGGGAAATTAAGTAAAAGATATACA i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 203047 71 + 2521317 TGATGTTCTAACATCCATGTTTACAGAATATAGAAAAGGAACACAAGGGGAAATTAAGTAAAAAATATACA i manLeu1.NW_012103943v1 C 0 C 0 s aotNan1.NW_018501968v1 1100001 71 - 2246441 TGAGGTTCTAACATCCATGTTTACAGAATATAGAAAAGGAACGCGAGGGGAAGTTaagtaaagaatataca i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 693860 71 - 940639 TGAGAGTCTAACATTCATGTTTACAGAATTTGGAAAAGGAACACAAGGGGAAATGAAATAAAAAATATACA i proCoq1.NW_012152163v1 C 0 C 0 s otoGar3.GL873522 1192482 71 + 48283576 TAAGCTTCCAATATTTGTGTTTACAGAACATGGAAAAGGAACACAAATAAAAATACAAATATAAAAATACA i otoGar3.GL873522 I 4 C 0 s canFam3.chr4 37128086 63 + 88276631 --------TAACATTTGTGTTTACAGAATATAGAAAAAGAGCACAAGGGAAAGTGAAATAAAAAACACACA i canFam3.chr4 C 0 C 0 e dasNov3.JH562710 207994 60 - 960158 I e colAng1.NW_012115755v1 1692899 1250 - 2415367 M a score=16266.000000 s hg38.chr5_KI270795v1_alt 7443 3 + 131892 TTA s panTro5.chr5 5256057 3 - 181907262 tta i panTro5.chr5 C 0 C 0 s panPan2.chr5 5518447 3 - 183735486 TTA i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1616020 3 + 3967317 TTA i gorGor5.CYUI01015413v1 C 0 C 0 s rheMac8.chr6 5701090 3 - 180051392 TTA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5892884 3 - 181584905 TTA i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 921961 3 - 16193990 TTT i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1738974 3 - 21434487 TTA i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4707869 3 - 82825804 TTA i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 203118 3 + 2521317 TTA i manLeu1.NW_012103943v1 C 0 C 0 s aotNan1.NW_018501968v1 1100072 3 - 2246441 tta i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1192553 3 + 48283576 TTA i otoGar3.GL873522 C 0 C 0 s canFam3.chr4 37128149 3 + 88276631 TGA i canFam3.chr4 C 0 C 0 e proCoq1.NW_012152163v1 693931 0 - 940639 C e dasNov3.JH562710 207994 60 - 960158 I e colAng1.NW_012115755v1 1692899 1250 - 2415367 M a score=5500.000000 s hg38.chr5_KI270795v1_alt 7446 1 + 131892 C s panTro5.chr5 5256060 1 - 181907262 c i panTro5.chr5 C 0 C 0 s panPan2.chr5 5518450 1 - 183735486 C i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1616023 1 + 3967317 C i gorGor5.CYUI01015413v1 C 0 C 0 s rheMac8.chr6 5701093 1 - 180051392 C i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5892887 1 - 181584905 C i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 921964 1 - 16193990 C i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1738977 1 - 21434487 C i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4707872 1 - 82825804 C i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 203121 1 + 2521317 C i manLeu1.NW_012103943v1 C 0 C 0 s aotNan1.NW_018501968v1 1100075 1 - 2246441 c i aotNan1.NW_018501968v1 C 0 C 0 e otoGar3.GL873522 1192556 0 + 48283576 C e canFam3.chr4 37128152 0 + 88276631 C e proCoq1.NW_012152163v1 693931 0 - 940639 C e dasNov3.JH562710 207994 60 - 960158 I e colAng1.NW_012115755v1 1692899 1250 - 2415367 M a score=530745.000000 s hg38.chr5_KI270795v1_alt 7447 104 + 131892 Aggccgggcgcggtggctcatgcctgtaatcccagcactttgggaggcagagacgggtggatcacctgacatcaggagttcgagaccagcctggccagcatagc s panTro5.chr5 5256061 104 - 181907262 aggccgggcgcggtggctcatgcctgtaatcccagcactttgggaggccgagacgggtggatcacctgacatcaggagttcgagaccagcctggccagcatagc i panTro5.chr5 C 0 C 0 s panPan2.chr5 5518451 104 - 183735486 Aggccgggcgcggtggctcatgcctataatcccagcactttgggaggccgagacgggtggatcacctgacatcaggagttcgagaccagcctggccagcatagc i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1616024 104 + 3967317 Aggccgggcgcggtggctcatgcccgtaatcccagcactttgggaggctgagacgggtggatcacctgacatcaggagttcgagaccagcctggccagcatagc i gorGor5.CYUI01015413v1 C 0 C 0 s rheMac8.chr6 5701094 104 - 180051392 Aggctgggcacggtggctcacgcctataatcccagcactttgggaggccgagacgcatggatcacctgacatcaggagttcgagaccagcctggccaacatagt i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5892888 104 - 181584905 Aggctgggcacggtggctcacgcctataatcccagcactttgggaggccgagacgcatggatcacctgacatcaggagttcgagaccagcctggccaacatagt i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 921965 104 - 16193990 Aggctgggcacggtggctcacgcctataatcccagcactttgggaggccaagacgcatggatcacctgacatcaggagttcgagaccagcctggccaacatagt i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1738978 104 - 21434487 Aggctgggcacggtggctcacgcctataatcccagcactttgggaggccgagacgcatggatcacctgacattaggagttcgagaccagcctggccaacatagt i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4707873 104 - 82825804 Aggctggacacggtggctcacgcctgtaatcccagcactttgggaggccgagacgagtggatcacctgacgtcaggagttcgagaccagcctggccaacatagc i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 203122 104 + 2521317 Aggctggacacggtggctcacgcctgtaatcccagcactttgggaggccgagacaagtggatcacctgacgtcaggagttcgagaccagcctggccaacatagc i manLeu1.NW_012103943v1 C 0 C 0 s calJac3.chr2 142763928 103 - 204313951 Aggcctggcgcagggactcacgcctgtaatcccagcactttgggaggctgagatggttggatcacctaacatcaggagttcaagaccag-ctggccaacatggt i calJac3.chr2 N 0 C 0 s aotNan1.NW_018501968v1 1100076 103 - 2246441 aggccgggcacggtggctcatgcctgtaatcccagcagtttgggaggctaagacgggtggattaccaaacatcaggagttcgagaccag-ctggctaacatggt i aotNan1.NW_018501968v1 C 0 C 0 s canFam3.chr4 37128152 3 + 88276631 ------------------------TGT----------------------------------------------------------------------------- i canFam3.chr4 C 0 C 0 e otoGar3.GL873522 1192556 0 + 48283576 C e proCoq1.NW_012152163v1 693931 0 - 940639 C e dasNov3.JH562710 207994 60 - 960158 I e colAng1.NW_012115755v1 1692899 1250 - 2415367 M a score=174979.000000 s hg38.chr5_KI270795v1_alt 7551 28 + 131892 gaaaccccatctc-aaccaaaaatacaaa s panTro5.chr5 5256165 28 - 181907262 gaaaccccatctc-aaccaaaaatacaaa i panTro5.chr5 C 0 C 0 s panPan2.chr5 5518555 28 - 183735486 gaaaccccatctc-aaccaaaaatacaaa i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1616128 28 + 3967317 gaaaccccatctc-aaccaaaaatacaaa i gorGor5.CYUI01015413v1 C 0 C 0 s rheMac8.chr6 5701198 28 - 180051392 gaaaccctgtctc-aactaaaaatacaaa i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5892992 28 - 181584905 gaaaccctgtctc-aactaaaaatacaaa i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 922069 28 - 16193990 gaaaccctgtctc-aactaaaaatacaaa i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1739082 28 - 21434487 gaaaccctgtctc-aactaaaaatacaaa i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4707977 28 - 82825804 gaaactccgtctc-aactgaaaatacaaa i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 203226 29 + 2521317 gaaactccgtctcaaattgaaaatacaaa i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1694149 28 - 2415367 gaaaccccgtctc-aactgaaaatacaaa i colAng1.NW_012115755v1 M 1250 C 0 s calJac3.chr2 142764031 28 - 204313951 gaaaccccatctc-tactaaaaatacaaa i calJac3.chr2 C 0 C 0 s aotNan1.NW_018501968v1 1100179 28 - 2246441 gaaaccccatctc-tactaaaaatacaaa i aotNan1.NW_018501968v1 C 0 C 0 s canFam3.chr4 37128155 13 + 88276631 ----------------TCAAAAATACAAA i canFam3.chr4 C 0 C 0 e otoGar3.GL873522 1192556 0 + 48283576 C e proCoq1.NW_012152163v1 693931 0 - 940639 C e dasNov3.JH562710 207994 60 - 960158 I a score=856519.000000 s hg38.chr5_KI270795v1_alt 7579 144 + 131892 aaattagccaggcatggtggcggtgcttgtaatcccagctactcgggagactgaggcagaagacttggttgaacctgggaggcggaagttgcagtgagccaagatcg---cactgcactccagcctgggcaataggagcaaaacttc s panTro5.chr5 5256193 144 - 181907262 aaattagccaggcatggtggcggtgcctgtaatcccagctactcgggagagtgaggcagaagacttggttgaacctgggaggcggaagttgcagtgagccaagatcg---tactgcactccagcctgggcaataggagcaaaacttc i panTro5.chr5 C 0 C 0 s panPan2.chr5 5518583 144 - 183735486 aaattagccaggcatggtggcggtgcctgtaatcccagctactcgggagagtgaggcagaagacttggttgaacctgggaggcggaagttgcagtgagccaagatcg---cactgcactccagcctgggcaataggagcaaaacttc i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1616156 144 + 3967317 aaattagccaggcatggtggcggtgcctgtaatcccagctactcgggagactgaggcagaagacttgcttgaacctgggaggcggaagttgcagtgagccaagatcg---cactgcactccagcctgggcaataggagcaaaacttc i gorGor5.CYUI01015413v1 C 0 C 0 s rheMac8.chr6 5701226 147 - 180051392 aacttagccgggcatggtggtggtgcgggtaatcccagctacttgggaggctgacgcggaagatttgcttgaacctgggaggcagaagttgcagtgagccaagatcgcaccactgcactccaacctaggcaataagagcaaaacttc i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5893020 147 - 181584905 aacttagccgggcatggtggtggtgcgggtaatcccagctacttgggaggctgacgcggaagatttgcttgaacctgggaggcagaagttgcagtgagccaagatcgcaccactgcactccaacctaggcaataagagcaaaacttc i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 922097 147 - 16193990 aacttagccgggcatggtggtggtgcgggtaatcccagctacttgggaggctgacgcggaagatttgcttgaacctgggaggcagaagttgcagtgagccaagatcgcaccactgcactccaacctaggcaataagagcaaaacttc i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1739110 147 - 21434487 aacttagccgggcatggtggtggtgcgggtaatcccagctacttgggaggctgacgcagaagatttgcttgaacctgggaggcagaagttgcagtgagccaagatcgcaccactgcactccaacctaggcaataagagcaaaacttc i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4708005 147 - 82825804 agattaaccaggctttgttgtggtgcctgtaatcccggctacttgggaggctgatacagaagacttgcttgaacctgggaggcggaatttgcagtaagccaagattgcaccactgcactctagcctaggcagtaagagcaaaacttc i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 203255 147 + 2521317 agatgaaccaggctttgttgtggtgcctgtaatcccagctacttgggaggctgacgcagaagatttgcttgaacctgggaggcggaagttgcagtgagccgagattgcaccactgcactctagcgtaggcagtaagagcaaaacttc i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1694177 147 - 2415367 aaattaaccaggcattgtggtggtgcctgtaatcccagctacttgggaggctgatgcagaagacttgcttgaacctgggaggcggaagttgcagtgagccaagattgtaccactgcactccagcctaggcaataagagcaaaacttc i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142764059 147 - 204313951 gaattagccaggcatggtagcagtgtctgtaatcccagctaattgggaggctgaggcaggagaattgctcgaacctgggaggtgaaagttgcagtgagccaagatcccaccaccacactctagcctgggcaacaagaatgaaacttt i calJac3.chr2 C 0 C 0 s aotNan1.NW_018501968v1 1100207 139 - 2246441 gaattagccaggcatggtagtggtgtctgtaaccccagctacttg------tgaggcaggagaattgcttgaacct--gaggtgaaagttgcagtgagccaagatcccaccactgcactctagcctgggcaacaagaatgaaacttt i aotNan1.NW_018501968v1 C 0 C 0 e otoGar3.GL873522 1192556 0 + 48283576 C e canFam3.chr4 37128168 0 + 88276631 C e proCoq1.NW_012152163v1 693931 0 - 940639 C e dasNov3.JH562710 207994 60 - 960158 I a score=37670.000000 s hg38.chr5_KI270795v1_alt 7723 6 + 131892 atctc-a s panTro5.chr5 5256337 6 - 181907262 atctc-a i panTro5.chr5 C 0 C 0 s panPan2.chr5 5518727 6 - 183735486 atctc-a i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1616300 6 + 3967317 atctc-a i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4467937 6 + 163208435 ATCTC-A i nomLeu3.chr2 N 0 C 0 s rheMac8.chr6 5701373 6 - 180051392 atctc-a i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5893167 6 - 181584905 atctc-a i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 922244 6 - 16193990 atctc-a i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1739257 6 - 21434487 atctc-a i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4708152 7 - 82825804 atctcaa i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 203402 6 + 2521317 atctc-a i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1694324 6 - 2415367 atctc-a i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142764206 6 - 204313951 gtatc-a i calJac3.chr2 C 0 C 0 s aotNan1.NW_018501968v1 1100346 6 - 2246441 gtatc-a i aotNan1.NW_018501968v1 C 0 C 0 e otoGar3.GL873522 1192556 0 + 48283576 C e canFam3.chr4 37128168 0 + 88276631 C e proCoq1.NW_012152163v1 693931 0 - 940639 C e dasNov3.JH562710 207994 60 - 960158 I a score=190963.000000 s hg38.chr5_KI270795v1_alt 7729 34 + 131892 aaaaaaaa-ttaaaaaataaaaaaTATACATTACA s panTro5.chr5 5256343 35 - 181907262 aaaaaaaaattaaaaaataaaaaatatacattaca i panTro5.chr5 C 0 C 0 s panPan2.chr5 5518733 34 - 183735486 aaaaaaaa-attaaaaataaaaaaTATACATTACA i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1616306 35 + 3967317 aaaaaaaaataaaaaaataaaaaaTATACATTACA i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4467943 28 + 163208435 AAAAAAAA-------ATTTAAAAATATACATTACA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5701379 34 - 180051392 aaaaaaaa-ttaaaaattaaaaaTTATATATTACA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5893173 34 - 181584905 aaaaaaaa-ttaaaaattaaaaaTTATATATTACA i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 922250 34 - 16193990 aaaaaaaa-ttaaaaattaaaaaTTATATATTACA i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1739263 34 - 21434487 aaaaaaaa-ttaaaaattaaaaaTTATATATTACA i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4708159 34 - 82825804 aaaaaaaa-ttaaaaattaaaaaaTGTAAATTACA i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 203408 34 + 2521317 aaaaaaaa-ttaaaaattaaaaaaTGTAAATTACA i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1694330 34 - 2415367 aaaaaaca-ctaaaaattaaaaaaTATAAATTACA i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142764212 30 - 204313951 aaaaataa-----aaaataaaaaaTATACATTACA i calJac3.chr2 C 0 C 0 s aotNan1.NW_018501968v1 1100352 27 - 2246441 aaa---aa-----aaattaaaaaatatacattaca i aotNan1.NW_018501968v1 C 0 C 0 s dasNov3.JH562710 208054 31 - 960158 AAAGGAAA-T---GAAATAAAAACTGGCCACAACA i dasNov3.JH562710 I 60 C 0 e otoGar3.GL873522 1192556 0 + 48283576 C e canFam3.chr4 37128168 0 + 88276631 C e proCoq1.NW_012152163v1 693931 0 - 940639 C a score=141582.000000 s hg38.chr5_KI270795v1_alt 7763 14 + 131892 TACAAAAATACAAA s panTro5.chr5 5256378 14 - 181907262 tacaaaaatacaaa i panTro5.chr5 C 0 C 0 s panPan2.chr5 5518767 14 - 183735486 TACAAAAATACAAA i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1616341 14 + 3967317 TACAAAAATACAAA i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4467971 14 + 163208435 TACAAAAATACAAA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5701413 14 - 180051392 TACAAAACTACAAA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5893207 14 - 181584905 TACAAAACTACAAA i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 922284 14 - 16193990 TACAAAACTACAAA i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1739297 14 - 21434487 TACAAAAATACAAA i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4708193 14 - 82825804 TACAAAAATACAAA i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 203442 14 + 2521317 TACAAAAATACAAA i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1694364 14 - 2415367 TACAAAAATACAAA i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142764242 14 - 204313951 TACAAAAACACAAA i calJac3.chr2 C 0 C 0 s aotNan1.NW_018501968v1 1100379 14 - 2246441 tacaaaaatacaaa i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 693931 14 - 940639 TACAAAGATACAAA i proCoq1.NW_012152163v1 C 0 C 0 s dasNov3.JH562710 208085 14 - 960158 TGCAAAAATACAAA i dasNov3.JH562710 C 0 C 0 e otoGar3.GL873522 1192556 0 + 48283576 C e canFam3.chr4 37128168 0 + 88276631 C a score=27009.000000 s hg38.chr5_KI270795v1_alt 7777 4 + 131892 ATGA s panTro5.chr5 5256392 4 - 181907262 atga i panTro5.chr5 C 0 C 0 s panPan2.chr5 5518781 4 - 183735486 ATGA i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1616355 4 + 3967317 ATGA i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4467985 4 + 163208435 ACGA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5701427 4 - 180051392 ATGA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5893221 4 - 181584905 ATGA i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 922298 4 - 16193990 ATGA i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1739311 4 - 21434487 ATGA i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4708207 4 - 82825804 ATGA i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 203456 4 + 2521317 ATGA i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1694378 4 - 2415367 ATGA i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142764256 4 - 204313951 ATGA i calJac3.chr2 C 0 C 0 s aotNan1.NW_018501968v1 1100393 4 - 2246441 atga i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 693945 4 - 940639 GTTA i proCoq1.NW_012152163v1 C 0 C 0 s canFam3.chr4 37128168 4 + 88276631 GTTA i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 208099 2 - 960158 AC-- i dasNov3.JH562710 C 0 C 0 e otoGar3.GL873522 1192556 0 + 48283576 C a score=770389.000000 s hg38.chr5_KI270795v1_alt 7781 69 + 131892 ATGCAGAAATACAAAGAATCACATTT---ACGT---GATTTCAGATACTGAGAATCagagtgtagattttagagt s panTro5.chr5 5256396 69 - 181907262 atgcagaaatacaaaGAATCACATTT---ACAT---GATTTCAGATACTGAGAATCagagtgtagattttagagt i panTro5.chr5 C 0 C 0 s panPan2.chr5 5518785 69 - 183735486 ATGCAGAAATACAAAGAATCACATTT---ACAT---GATTTCAGATACTGAGAATCagagtgtagattttagagt i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1616359 69 + 3967317 ATGCAGAAATACAAAGAATCACATTT---ACAT---GATTTCAGATACTGAGAATCagagtgtagattttagagt i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4467989 69 + 163208435 ATGCAGAAATATAAAGAATCACATTT---ACAT---GATCTCAGATACTGAGAATCagagtgtagattttagagt i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5701431 69 - 180051392 ATGCAGAGATACAAAGAGTCACATTT---ACAT---GATTTCAGATACTGAGAATCagagtgtagattttggagt i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5893225 69 - 181584905 ATGCAGAGATACAAAGAGTCACATTT---ACAT---GATTTCAGATACTGAGAATCagagtgtagattttggagt i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 922302 69 - 16193990 ATGCAGAGATACAAAGAGTCATATTT---ACAT---GATTTCAGATACTGAGAATCagagtgtagattttggagt i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1739315 69 - 21434487 ATGCAGAGATACAAAGAGTCACATTT---ACAT---GATTTTAGATACTGAGAATCACagtgtagattttggagt i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4708211 69 - 82825804 ATGCAGAGATACAAAGAGTCACATTT---ATAT---GATTTCAGATACTGAGAATCagagtgtagattttggagt i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 203460 69 + 2521317 ATGCAGAAATACAAAGAGTCACATTT---ACAT---GATTTCAGATACTGAGAATCagagtgtagattttggagt i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1694382 68 - 2415367 ATGCAGAAATACAAAGAGTCACATTT---ACAT---GATTTCAgatactgagaat-agagtgtagattttggagt i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142764260 69 - 204313951 ATGTAGAAATACAAAGAATCACATTT---ACAT---TACTTCAGATACTGAGAATCagagtgtagattttggagt i calJac3.chr2 C 0 C 0 s aotNan1.NW_018501968v1 1100397 69 - 2246441 atgtagaaatacaaaGAATCACATTT---ACAT---GACTTCAGATACTGAGAATCagagtgtagattttggagt i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 693949 72 - 940639 ATACAGAAATATAGAGAATCACATTTACAACAT---GGTGTCAGATATTAAGTATCagagtgcagattttggggt i proCoq1.NW_012152163v1 C 0 C 0 s otoGar3.GL873522 1192556 72 + 48283576 ATACATAAATACAAAGAATCACATTTACAACAT---GGTTTCAGATAATAAGTATCagggtgcagattttggtgt i otoGar3.GL873522 C 0 C 0 s canFam3.chr4 37128172 75 + 88276631 ATATAGAAACACAAAGAATTATGTTCATAACATGGAGATTTCAGGTACTGAGAATCagagtgtagattttggagt i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 208101 50 - 960158 ATAAAGAAATACAAAGAATCACAGTT---ACAA----------------------CAAAATCTAGATTTTGGAGT i dasNov3.JH562710 C 0 I 719 a score=231605.000000 s hg38.chr5_KI270795v1_alt 7850 21 + 131892 cagtaacatctgagttctaac s panTro5.chr5 5256465 21 - 181907262 cagtaacatctgagttctaac i panTro5.chr5 C 0 C 0 s panPan2.chr5 5518854 21 - 183735486 cagtaacatctgagttctaac i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1616428 21 + 3967317 cagtaacatctgagttctaac i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4468058 21 + 163208435 cagtaacctctgagttctaac i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5701500 21 - 180051392 cagtaacatctgagttctaac i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5893294 21 - 181584905 cagtaacatctgagttctaac i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 922371 21 - 16193990 cagtaacatctgagttctaac i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1739384 21 - 21434487 cagtaacatctgagttctaac i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4708280 21 - 82825804 cagtaacatctgagttctaac i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 203529 21 + 2521317 cagtaacatctgagttctaac i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1694450 21 - 2415367 cagtaacatccgagttctaac i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142764329 21 - 204313951 cagtaacatctgagttctaac i calJac3.chr2 C 0 C 0 s aotNan1.NW_018501968v1 1100466 21 - 2246441 cagtaacatctgagttctaac i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 694021 21 - 940639 taataacatttaagttctaac i proCoq1.NW_012152163v1 C 0 C 0 s otoGar3.GL873522 1192628 21 + 48283576 taaaaacatttaaattctaag i otoGar3.GL873522 C 0 C 0 s canFam3.chr4 37128247 20 + 88276631 c-gtaacagctgagttctaat i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 208870 20 - 960158 cagtcacatctgagttgagt- i dasNov3.JH562710 I 719 C 0 a score=751535.000000 s hg38.chr5_KI270795v1_alt 7871 67 + 131892 ctttgctctgtcacatgatagtcatgtgacctggaccaggacattttacctctttctacttcagttt s panTro5.chr5 5256486 67 - 181907262 ctttgctgtgtcacatgatagtcatgtgacctggaccaggacattttacctctttctacttcagttt i panTro5.chr5 C 0 C 0 s panPan2.chr5 5518875 67 - 183735486 ctttgctctgtcacatgatagtcatgtgacctggaccaggacattttacctctttctacttcagttt i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1616449 67 + 3967317 ctttgctgtgtcacgtgatagtcatgtgacctggaccaggacattttacctctttctacttcagttt i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4468079 67 + 163208435 ctttgctctgtcacatgatagtcatgtgacttggaacaggacattttacctctttctacttcagttt i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5701521 66 - 180051392 ctttcctctgtcacat-atagtcatgtgacctggaacaggatattttacctctgtctacttcagttt i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5893315 66 - 181584905 ctttcctctgtcacat-atagtcatgtgacctggaacaggatattttacctctttctacttcagttt i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 922392 66 - 16193990 ctttcctctgtcacat-atagtcatgtgacctggaacaggatattttacctctttctacttcagttt i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1739405 66 - 21434487 cttttctctgtcacat-atagtcatgtgacctggaacaggacattttacctctttctacttcggttt i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4708301 66 - 82825804 ctttcctctgtcacat-atagtcatgtgacctggaacaggacattttacctctttctacttcagttt i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 203550 66 + 2521317 cttttctctgtcacat-atagtcatgtgacctggaacaggacattttacctctttctacttcagttt i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1694471 66 - 2415367 ctttcctctgtcacat-atagtcatgtgacctggaacaggacattttacctctttctacttcagttt i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142764350 62 - 204313951 ctttgctctgtcacatgctagtcatgtgacctggaacaggacatttaacctctt-----tttaattt i calJac3.chr2 C 0 C 0 s aotNan1.NW_018501968v1 1100487 67 - 2246441 ctttgctctgtcacatgctagtcatgtgacctggtacaggacattttacctctttctactttaactt i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 694042 67 - 940639 ttttgctctgtcatataccagtcatgtgacatagagcaggacattttacttctttctttttcagttt i proCoq1.NW_012152163v1 C 0 I 67 s otoGar3.GL873522 1192649 67 + 48283576 ttttgcttgggcatataccagtcatgtgacctagaataggacattttacctctttctttttcagttt i otoGar3.GL873522 C 0 C 0 s mm10.chr13 65949954 64 - 120421639 CTTTTctctatcaaatattaggcctgtgacttggggaaggccattttgtccctttc---gtcagttt i mm10.chr13 N 0 C 0 s canFam3.chr4 37128267 67 + 88276631 ctttgctctgtccaatagcagccatgtgatctggagcagaacattttgcctctttgttctttagttt i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 208890 60 - 960158 ctttgctctgtcatatacca-------gacctgcacaaggacattttaccactttgttcttcagttt i dasNov3.JH562710 C 0 C 0 a score=414837.000000 s hg38.chr5_KI270795v1_alt 7938 62 + 131892 ttgtatctTGG-TAGGGACTTGTAAATCCTCAGTG--TATGCAGCaaaaaaaaaaaaaaaaaaaa s panTro5.chr5 5256553 63 - 181907262 ttgtatctTGGACAGGGACTTGTAAATCCTCAGTG--TATGCAGCaaaaacaaaaaaacaaaaaa i panTro5.chr5 C 0 C 0 s panPan2.chr5 5518942 63 - 183735486 ttgtatctTGGACAGGGACTTGTAAATCCTCAGTG--TATGCAGCaaaaaaaaaaaaaaaaaaaa i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1616516 65 + 3967317 ttgtatctTGGACAGGGACTTGTAAATCCTCAGTGTATATGCAGCaaaaaaaaaaaaaaaaaaaa i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4468146 63 + 163208435 ttgtatctTGGACAGGGACTTGTAAATCCTCAGTG--TATGCAGCaaaaaaaaaaaaaaaaaaaa i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5701587 63 - 180051392 ttgtatctTGGACAGGGGCTTGTAAATCCTCAGTG--TATGCAGCAaaaaaaaaaaaaaaaaaaa i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5893381 63 - 181584905 ttgtatctTGGACAGGGGCTTGTAAATCCTCAGTG--TATGCAGCaaaaaaaaaaaaaaaaaaaa i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 922458 63 - 16193990 ttgtatctTGGACAGGGGCTTGTAAATCCTCAGTG--TATGCagcaaaaaaaaaaaaaaaaaaaa i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1739471 63 - 21434487 ttgtatctTGGACAGGGGCTTGTAAATCCTCAGTG--TATGCAGCaaaaaaaaaaaaaaaagaaa i cerAty1.NW_012007035v1 C 0 I 14 s chlSab2.chr23 4708367 61 - 82825804 ttgtatctTGGACAGGGACTTGTAAGTCCTCAGTG--TATGCAGC--AAAAAAATATGAAATATA i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 203616 63 + 2521317 ttgtatctTGGACAGGGGCTTGTAAATCCTCAGTG--TATGCAGCAAAAAAAAATATGAAATATA i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1694537 61 - 2415367 TTGTGTCTTGGACAGGGACTTGTAAGTCCTCAGTG--TATGCAGC--AAAAAAATATGAAATATA i colAng1.NW_012115755v1 C 0 I 2 s calJac3.chr2 142764412 48 - 204313951 ccgcatctTGGACAGGGACTTATAAATCCTCAGTG--TATCTAGC-----AAAAA---------- i calJac3.chr2 C 0 C 0 s aotNan1.NW_018501968v1 1100554 53 - 2246441 ccatatcttggacaggggcttataaATCCTCAGTG--TATCTAGCAAAAAAAAAA---------- i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1192716 47 + 48283576 ccttatcttgaagtgggAGACATAAATTTTCAGTG--TATGTAGGAAAA---------------- i otoGar3.GL873522 C 0 C 0 s mm10.chr13 65950018 40 - 120421639 ccttacctaatataagaa-GCACAAGTCCTCAGTG--TCTGTA---------------------- i mm10.chr13 C 0 C 0 s canFam3.chr4 37128334 59 + 88276631 ccttacctggaacctggagatagaaatcctCTGTG--TATGGAGGAAAAAAGAAAAAGCAA---- i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 208950 35 - 960158 tcttatgtgtgatgcagagataaaaatccccaGTG------------------------------ i dasNov3.JH562710 C 0 C 0 e proCoq1.NW_012152163v1 694109 67 - 940639 I a score=5362.000000 s hg38.chr5_KI270795v1_alt 8000 1 + 131892 a s panTro5.chr5 5256616 1 - 181907262 a i panTro5.chr5 C 0 I 4 s panPan2.chr5 5519005 1 - 183735486 a i panPan2.chr5 C 0 I 3 s gorGor5.CYUI01015413v1 1616581 1 + 3967317 a i gorGor5.CYUI01015413v1 C 0 I 4 s nomLeu3.chr2 4468209 1 + 163208435 a i nomLeu3.chr2 C 0 I 4 s rheMac8.chr6 5701650 1 - 180051392 a i rheMac8.chr6 C 0 I 2 s macFas5.chr6 5893444 1 - 181584905 a i macFas5.chr6 C 0 I 2 s macNem1.NW_012018466v1 922521 1 - 16193990 a i macNem1.NW_012018466v1 C 0 I 17 s chlSab2.chr23 4708428 1 - 82825804 G i chlSab2.chr23 C 0 I 1 s manLeu1.NW_012103943v1 203679 1 + 2521317 G i manLeu1.NW_012103943v1 C 0 I 1 s colAng1.NW_012115755v1 1694600 1 - 2415367 A i colAng1.NW_012115755v1 I 2 I 1 s calJac3.chr2 142764460 1 - 204313951 A i calJac3.chr2 C 0 C 0 s aotNan1.NW_018501968v1 1100607 1 - 2246441 A i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1192763 1 + 48283576 A i otoGar3.GL873522 C 0 I 1 e mm10.chr13 65950058 0 - 120421639 C e cerAty1.NW_012007035v1 1739534 14 - 21434487 I e canFam3.chr4 37128393 0 + 88276631 C e proCoq1.NW_012152163v1 694109 67 - 940639 I e dasNov3.JH562710 208985 0 - 960158 C a score=-13088.000000 s hg38.chr5_KI270795v1_alt 8001 2 + 131892 aa s panTro5.chr5 5256621 2 - 181907262 aa i panTro5.chr5 I 4 C 0 s panPan2.chr5 5519009 2 - 183735486 aa i panPan2.chr5 I 3 C 0 s gorGor5.CYUI01015413v1 1616586 2 + 3967317 aa i gorGor5.CYUI01015413v1 I 4 C 0 s nomLeu3.chr2 4468214 2 + 163208435 at i nomLeu3.chr2 I 4 C 0 s rheMac8.chr6 5701653 1 - 180051392 a- i rheMac8.chr6 I 2 I 1 s macFas5.chr6 5893447 1 - 181584905 a- i macFas5.chr6 I 2 I 1 s chlSab2.chr23 4708430 1 - 82825804 A- i chlSab2.chr23 I 1 I 2 s manLeu1.NW_012103943v1 203681 1 + 2521317 A- i manLeu1.NW_012103943v1 I 1 I 7 s colAng1.NW_012115755v1 1694602 1 - 2415367 A- i colAng1.NW_012115755v1 I 1 C 0 s calJac3.chr2 142764461 1 - 204313951 -A i calJac3.chr2 C 0 I 5 s aotNan1.NW_018501968v1 1100608 1 - 2246441 -A i aotNan1.NW_018501968v1 C 0 I 5 s otoGar3.GL873522 1192765 1 + 48283576 A- i otoGar3.GL873522 I 1 C 0 e mm10.chr13 65950058 0 - 120421639 C e cerAty1.NW_012007035v1 1739534 14 - 21434487 I e macNem1.NW_012018466v1 922522 17 - 16193990 I e canFam3.chr4 37128393 0 + 88276631 C e proCoq1.NW_012152163v1 694109 67 - 940639 I e dasNov3.JH562710 208985 0 - 960158 C a score=-34970.000000 s hg38.chr5_KI270795v1_alt 8003 12 + 131892 tacaaaaTA-----CAG s panTro5.chr5 5256623 15 - 181907262 aacaaaaaaaA--ACAG i panTro5.chr5 C 0 C 0 s panPan2.chr5 5519011 15 - 183735486 aaaaaaaaaTA--ACAG i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1616588 12 + 3967317 aaaaaaaTA-----CAG i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4468216 16 + 163208435 atatatatata-tatat i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5701655 12 - 180051392 aaagaaatatag----- i rheMac8.chr6 I 1 I 8 s macFas5.chr6 5893449 12 - 181584905 aaaaaaaaaTAG----- i macFas5.chr6 I 1 I 8 s chlSab2.chr23 4708433 5 - 82825804 ------AAGTA------ i chlSab2.chr23 I 2 C 0 s colAng1.NW_012115755v1 1694603 5 - 2415367 ------AAGTA------ i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142764467 8 - 204313951 AAATAAAG--------- i calJac3.chr2 I 5 C 0 s aotNan1.NW_018501968v1 1100614 8 - 2246441 AAATATAG--------- i aotNan1.NW_018501968v1 I 5 C 0 s otoGar3.GL873522 1192766 5 + 48283576 ------------TACAT i otoGar3.GL873522 C 0 I 4 e mm10.chr13 65950058 0 - 120421639 C e cerAty1.NW_012007035v1 1739534 14 - 21434487 I e macNem1.NW_012018466v1 922522 17 - 16193990 I e canFam3.chr4 37128393 0 + 88276631 C e proCoq1.NW_012152163v1 694109 67 - 940639 I e dasNov3.JH562710 208985 0 - 960158 C e manLeu1.NW_012103943v1 203682 7 + 2521317 I a score=1302.000000 s hg38.chr5_KI270795v1_alt 8015 1 + 131892 G s panTro5.chr5 5256638 1 - 181907262 G i panTro5.chr5 C 0 C 0 s panPan2.chr5 5519026 1 - 183735486 G i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1616600 1 + 3967317 G i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4468232 1 + 163208435 a i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5701675 1 - 180051392 a i rheMac8.chr6 I 8 C 0 s macFas5.chr6 5893469 1 - 181584905 A i macFas5.chr6 I 8 C 0 s macNem1.NW_012018466v1 922539 1 - 16193990 a i macNem1.NW_012018466v1 I 17 C 0 s calJac3.chr2 142764475 1 - 204313951 G i calJac3.chr2 C 0 I 8 s aotNan1.NW_018501968v1 1100622 1 - 2246441 G i aotNan1.NW_018501968v1 C 0 I 8 e mm10.chr13 65950058 0 - 120421639 C e otoGar3.GL873522 1192771 4 + 48283576 I e cerAty1.NW_012007035v1 1739534 14 - 21434487 I e canFam3.chr4 37128393 0 + 88276631 C e proCoq1.NW_012152163v1 694109 67 - 940639 I e dasNov3.JH562710 208985 0 - 960158 C e colAng1.NW_012115755v1 1694608 0 - 2415367 C e manLeu1.NW_012103943v1 203682 7 + 2521317 I e chlSab2.chr23 4708438 0 - 82825804 C a score=124808.000000 s hg38.chr5_KI270795v1_alt 8016 33 + 131892 GAAAATGTAGGAAAAatatctaaata--------------------------tatatat s panTro5.chr5 5256639 34 - 181907262 GAAAATGTAGGAAAAATATCTAAAAA-------------------------ATATATAT i panTro5.chr5 C 0 C 0 s panPan2.chr5 5519027 33 - 183735486 GAAAATGTAGGAAAAATATCTAAAAA--------------------------TATATAT i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1616601 33 + 3967317 GAAAATGTAGGAAAAATATCTAAAAA--------------------------TATATAT i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4468233 59 + 163208435 gaaaatgtaggaaaaatatctaaaaatacatacatacatacatacatacatatatatat i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5701676 32 - 180051392 gaaaatgaaggaaaaa-aTCTAAAAA--------------------------TACATAT i rheMac8.chr6 C 0 I 3 s macFas5.chr6 5893470 32 - 181584905 GAAAATGAAGGAAAAA-ATCTAAAAA--------------------------TATATAT i macFas5.chr6 C 0 I 3 s macNem1.NW_012018466v1 922540 32 - 16193990 gaaaatgaaggaaaaa-aTCTAAAAA--------------------------TATATAT i macNem1.NW_012018466v1 C 0 I 3 s cerAty1.NW_012007035v1 1739548 32 - 21434487 GAAAATGAAGGAAAAA-ATCTAAAAA--------------------------TATATAT i cerAty1.NW_012007035v1 I 14 I 3 s chlSab2.chr23 4708438 32 - 82825804 GAAAATGAAGGAAAAA-ATCTAAAAA--------------------------TATATAT i chlSab2.chr23 C 0 I 3 s manLeu1.NW_012103943v1 203689 32 + 2521317 GAAAATGAAGGAAAAA-ATCTAAAAA--------------------------TATATAT i manLeu1.NW_012103943v1 I 7 I 3 s colAng1.NW_012115755v1 1694608 32 - 2415367 GAAAATGGAGGAAAAA-ATCTAAAAA--------------------------TATATAT i colAng1.NW_012115755v1 C 0 I 3 s calJac3.chr2 142764484 31 - 204313951 GAAAATGTAGGAAAAATGTCTAAATA--------------------------TATGT-- i calJac3.chr2 I 8 C 0 s aotNan1.NW_018501968v1 1100631 31 - 2246441 GGAAATGTAGAAAAAATGTCTAAATA--------------------------TATAT-- i aotNan1.NW_018501968v1 I 8 C 0 s otoGar3.GL873522 1192775 2 + 48283576 ------GC--------------------------------------------------- i otoGar3.GL873522 I 4 C 0 s mm10.chr13 65950058 10 - 120421639 -----------------------AGA--------------------------TATATAG i mm10.chr13 C 0 I 2 s canFam3.chr4 37128393 2 + 88276631 ------GC--------------------------------------------------- i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 208985 30 - 960158 ---GAGGTAGGAAAAATATATGGTAG--------------------------CATATGA i dasNov3.JH562710 C 0 C 0 e proCoq1.NW_012152163v1 694109 67 - 940639 I a score=2550991.000000 s hg38.chr5_KI270795v1_alt 8049 225 + 131892 atatGAAGA---TTCCTGAAAA-AGA-GGGGTAAGGA-AGAAAACTAGACACCAAATAGTTTCCTACTCCAAGATTTTAGAGA-CTTCAGTGGTATTCT-T-GGAGTCTG---AAAAGCTTTGTAGTTTCCAAGAATTTCTGG------TTGCAATGGGGTAG-GGAA-AAGATTGGG-----GAAAGAGAGGGACCTTATTTCCTACGGTCCTTCTGAGAGCCATATG--CTTTATATGTGTACTCATTTA s panTro5.chr5 5256673 228 - 181907262 ATATGAAGAAGATTCCTGAAAA-AGA-GGGGTAAGGA-AGAAAACTAGACACCAAATAGTTTCCTACTCCAAGATTTTAGAGA-CTTCACTGGTATTCT-T-GGAGTCTG---AAAAGCTTTGTAGTTTCCAAGAATTTCTGG------TTGCAACGGGGTAG-GGAA-AAGATTGGG-----GAAAGATAGGGACCTTATTTCCTACGGTCCTTCTGAGAGCCATATG--CTTTATATGTGTACTCATTTA i panTro5.chr5 C 0 C 0 s panPan2.chr5 5519060 228 - 183735486 ATATGAAGAAGATTCCTGAAAA-AGA-GGGGTAAGGA-AGAAAACTAGACACCAAATAGTTTCCTACTCCAAGATTTTAGAGA-CTTCACTGGTATTCT-T-GGAGTCTG---AAAAGCTTTGTAGTTTCCAAGAATTTCTGG------TTGCAACGGGGTAG-GGAA-AAGATTGGG-----GAAAGATAGGGACCTTATTTCCTACGGTCCTTCTGAGAGCCATATG--CTTTATATGTGTACTCATTTA i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1616634 226 + 3967317 ATATGAAGAAGATTCCTGAAAA-AGA-GGGGTTAGGA-AG-AAACTAGACACCAAATAGTTTCCTACTCCAAGATTTTAGAGA-CTTCACTGGTATTCT-T-GGAATCTG---AAAAGCTTTGTAGTTTCCAAGAATTTCTGG------TTGCAGTGGGGTAG-GGAA-AAGATTGGG-----GAAAGATAGGGA-CTTATTTCCTATGGTCCTTCTGAGAGCCATATG--CTTTATATGTGTACTCATTTA i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4468292 229 + 163208435 atatGAAGAAGATTCCTGAAAA-AGAGGGGGTAAGGA-AGAAAACTAGACACCAAATGGTTTCCTACTCCAAGATTTTAGAGA-CTTCACTGGTATTCT-T-GGAGTCTG---AAAAGCTTTGTAGTTTACAAGAATTTCTGG------TTGCAATGGGGTAG-GGAA-AAGATTGGG-----GAAAGATAGGGACCTTATTTCCTACGGTCCTTCTGAGAGCCACATG--CTTTATATGTGTACCCATTTA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5701711 228 - 180051392 ATATGAAGAAGATTCCTGAAAA-ATA-GGGGTAAGGA-AGAAAACTAGACACCAAATAGTTTCCTACTTCAAGATTTTAGAGA-CTTCACTGGTATCCT-T-GGAGTCTG---AAAAGCTTTGTCGTTTCCAAGAATTTCTGG------TTGCAATGGGGTAG-GGAA-AATATTGGG-----GAAAGATAGGGATCTTATCTCCTACGGTCCTTCTGAGAGCCACATG--CTTTATATGTGTACTTATTTA i rheMac8.chr6 I 3 C 0 s macFas5.chr6 5893505 228 - 181584905 ATATGAAGAAGATTCCTGAAAA-ATA-GGGGTAAGGA-AGAAAACTAGACACCAAATAGTTTCCTACTTCAAGATTTTAGAGA-CTTCACTGGTATCCT-T-GGAGTCTG---AAAAGCTTTGTCGTTTCCAAGAATTTCTGG------TTGCAATGGGGTAG-GGAA-AAGATTGGG-----GAAAGATAGGGATCTTATCTCCTACGGTCCTTCTGAGAGCCACATG--CTTTATATGTGTACTTATTTA i macFas5.chr6 I 3 C 0 s macNem1.NW_012018466v1 922575 228 - 16193990 ATATGAAGAAGATTCCTGAAAA-ATA-GGGGTAAGGA-AGAAAACTAGACACCAAATAGTTTCCTACTTCAAGATTttagaga-cttcactggtatcct-t-ggagtctg---aaaagctttgtcgtttccaagaatttctgg------ttgcaatgGGGTAG-GGAA-AAGATTGGG-----GAAAGATAGGGATCTTATCTCCTACGGTCCTTCTGAGAGCCACATG--CTTTATATGTGTACTTATTTA i macNem1.NW_012018466v1 I 3 C 0 s cerAty1.NW_012007035v1 1739583 228 - 21434487 ATATGAAAAAGATTCCTGAAAA-ATA-GGGGTAAGGA-AGAAAACTAGACACCAAATAGTTTCCTACTTCAAGATTTTAGAGA-CTTCACTGGTATCCT-T-GGAGTCTG---AAAAGCTTTGTCGTTTCCAAGAATTTCTGG------TTGCAATGGGGTAG-GGAA-AAGATTGGG-----GAAAGATAGGGATCTTATTTCCTACGGTCCTTCTGAGAGCCACATG--CTTTATATGTGTACTCATTTA i cerAty1.NW_012007035v1 I 3 C 0 s chlSab2.chr23 4708473 228 - 82825804 ATATGAAGAAGATTCCTGAAAA-ATA-GGGGTAAGGA-AGAAAACTAGACACCAAATAGTTTCCTACTCCAAGATTTGAGAGA-CTTCACTGGTATCCT-T-GGAGTCTG---AAAAGCTTTGTCGTTTCCAAGAATTTCTGG------TTGCAATGGGGTAG-GGAA-AAGATTGGG-----GAAAGATAGGGATCTTATTTCCTACGGTCCTTCTGAGAGCCACATG--CTTTATATGTGTACTCATTTA i chlSab2.chr23 I 3 C 0 s manLeu1.NW_012103943v1 203724 234 + 2521317 ATATGAAGAAGATTCCTGAAAA-ATA-GGGGTAAGGA-AGAAAACTAGACACCAAATAGTTTCCTACTTCAAGATTTTAGAGA-CTTCACTGGTATCCT-T-GGAGTCTG---AGAAGCTTTGTCGTTTCCAAGAATTTCTGGAAATTCTTGCAATGGGGTAG-GGAA-AAGATTGGG-----GAAAGATAGGGATCTTATTTCCTACGGTCCTTCTGAGAGCCACATG--CTTTATATGTGTACTTATTTA i manLeu1.NW_012103943v1 I 3 C 0 s colAng1.NW_012115755v1 1694643 224 - 2415367 ATATGAAGAAGATTCCTGAAAA-ATA-GGGGTAAGGA-AGAAATCTAGACACCAAATAGTTTCCTACTCCAAGATTttagaga-cttcactggtatcct-t-ggagtctg---aaaagctttgtagtttccaagaatttctgg------ttgcaatgAGATAG-GGAA-AAGATTGGG-----GAAAGATAGGGTCTTTATTTCCTACGGTCCTTCTGAAAGCCACATG--CTTTATATATGTACTC----A i colAng1.NW_012115755v1 I 3 C 0 s calJac3.chr2 142764515 230 - 204313951 ATATGAAGAAGATTCCTGAAAA-AGA-GGGGTAAGGA-AGAAAACTAGACAGCAAATAGTTTCCTACTCCAAGATTTTGGAGA-CTTCACGGGTATTCC-T-GGAGTCTG---AAAAGCTTTGTAGTTTCCAAGAATTTCTGG------TTGCAATGTGGCAG-GAAA-AAGATTGGG-----GAAAGAAAGGGACCTTATTTCCTACAGTCCTTCTGAGGGCCACATGAGAGCCATATGTGTACTTATTTA i calJac3.chr2 C 0 C 0 s aotNan1.NW_018501968v1 1100662 230 - 2246441 ATATGAAGAAGATTCCTGAAAA-AGA-CTGGTAAGGA-AGAAAACTAGACACCAAATGGTTTCCTACTCCAAGATTTTAGAGA-CTTCACTGGTATTCC-T-GGAGTCTG---AAAAGCTTCGTGGTTTCCAAGAATTTCTGC------TTGCATTGTGGTAG-GAAA-AAGATTGGG-----GAAAGAAAGGGACCTTATTTCCTACAGTCCTTCTGAGGGCCACATGAAAGCCATATGTGTACTTATTTA i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 694176 231 - 940639 ATATGAAGA---TTTCTGAAAT-AGA-AGGGTAAGGA-GGAAAACTAGACACCAAATAGTTTCCTACTCCAAGATTTTAGAGA-TTTCACTGGTATTCT-TTGGAATTTG---AAAACCTTTGTAGTTTTCAAGAATTTCTGG------TTGCACTGGGAGAG-GGAA-GAGAATTGGGTTTCAAAAGAGAGGGTCCTTACTTCCTCAGGCATTTCTGAGAGCCACGTG--CTTTACATATGGACTCATTTA i proCoq1.NW_012152163v1 I 67 C 0 s otoGar3.GL873522 1192777 207 + 48283576 ATATGAAGA---TTTCTGGAAA-AGA-AGATTAAGGA-AGAAAACTAGACACCAAATAGTTTCCTACTCAAAGATTTTAGTGA-ATTCACTGGTATTCT-TGGGAGTCTG---AAAAGCTTTGTCATTTTCAAGAATCTCTAT------TTGCAATAGG------------------------GAAAGAAAGGAATCTAACTTCCTAAGTTCTTTCTGAGAACCACGT----TTTACATGTAGACTCATTTA i otoGar3.GL873522 C 0 C 0 s mm10.chr13 65950070 193 - 120421639 ACATGAA----ATATTTGAAAA-AGA-AGGGAAGGAG-GGAAAATGAGATAACACATAGTTTTCTGCCCAAAGACTTTAGTGA-TTTTATTGACA--CT-T-TAGTCCTGTCTAACATCTTTGCAGTTTCTAAAACTTTCTGA------TTATGACGAGGTAG-GAAG-GAGAGTGTA-----GAAGCA-----------------------------GGAGCTATGTG--CT---TACGTGGCTTCATTTA i mm10.chr13 I 2 C 0 s canFam3.chr4 37128395 233 + 88276631 ATATGAAGTCAGTTCCTGAAAATAAA-AGTTTAAGGAGAGAAAACTAAACACCAAACAGTCTCCTAACCTAAGATTTTAATGAGCTTCATTGGTATTTTCT-GGAGTCTA---AAAAGCTTTGAAGTCTACAAGGATTTGTGA------TTGTAGTGGGGTAG-AGAAGGAAATTGGG-----GAAAGAGAAGGGCCTCACTTACTAAGGCTTTTCTCAGAGCTATGTG--CTTTACATGTGTGTGtattta i canFam3.chr4 C 0 I 373 s dasNov3.JH562710 209015 224 - 960158 ------AGATGATTCCTAAAAA-AGA-AAGGTAAGAAGGGAAAACTAGATACCAAATAGCCTCCTACCCCAAGATTTCAGTGA-CTTCCTTGGTATTCC-T-TGAAGTTT---AAAAGCTTTGTAGTCTCCAAGGATTTCTGG------CTGCAATGGGATAGAGGCA-GGAAGAGGG-----GAAAGAAAGGGGCCTCATTTACTAAGGTCCTTCTGAGAGCTGCCTG--CTTTCTATGTGGACTCATTCA i dasNov3.JH562710 C 0 C 0 a score=3151713.000000 s hg38.chr5_KI270795v1_alt 8274 314 + 131892 -----------GTACCTAGGACCTTCTgacactttcttat--gttgctggtggaa--gtataaattatta-aacctcttcatagg-----tgttttgg---caatatatatccaaataaaaaagtgcagatgtgtacaatgaaggttgtatagggatattcactgcaatattgttctaatattgttctaaaagc-----------aaattcatgaa--gggatcagttgaa-ta-----ttatatat--------------tcata----taaagactgccaccattgagaagaatgagacgtctg-----cattttctgacaagaaatgatttcctatacatatttaccataggaagcaagttgtgtaaggaatgctac s panTro5.chr5 5256901 308 - 181907262 -----------GTACCTAGGACCTTCTgacactttcttat--gttgctggtggaa--gtataaattatta-aacctcttcatagg-----tgttttgg---caatatatatccaaataaaaaagtgcagatgtgcacaatgaaggttgtatagggatattcgctgcaatattgttctaa-----------aagc-----------aaattcatgaa--gggatcagttgaa-taaactattatatat--------------tcata----taaagactgccaccattgagaagaatgagacgtctg-----cattttctgacaagaaatgatttcctatacatatttaccatagaaagcaagttgtgtaaggaatgctac i panTro5.chr5 C 0 C 0 s panPan2.chr5 5519288 308 - 183735486 -----------GTACCTAGGACCTTCTgacactttcttat--gttgctggtggaa--gtataaattatta-aacctcttcatagg-----tgttttgg---caatatatatccaaataaaaaagtgcagatgtgcacaatgaaggttgtatagggatattcgctgcaatattgttctaa-----------aagc-----------aaattcatgaa--gggatcagttgaa-taaactattatatat--------------tcata----taaagactgccaccattgagaagaatgagacgtctg-----cattttctgacaagaaatgatttcctatacatatttaccatagaaagcaagttgtgtaaggaatgctac i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1616860 308 + 3967317 -----------GTACCTAGGACCTTCTgacactttcttat--gttgctggtggaa--gtataaattatta-aacctcttcatagg-----tgttttgg---caatatatatccaaataaaaaagtgcagatgtgcacaatgaaggttgtatagggatattcactgcaatattgttctaa-----------aagc-----------aaattgatgaa--gggatcagttgaa-taaactattatatat--------------tcata----taaagactgccaccattgagaagaatgagacgtctg-----cattttctgacaagaaatgacttcctatacatatttaccatacaaagcaagttgTGTAAGGAATGCTAC i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4468521 310 + 163208435 -----------GTACCTAGGACCTTCTgacacttccttatacgttgctggtggaa--gtatagattatta-aacctcttcatagg-----tgttttgg---caatatatatccaaataaaaaagtgcagatgtgcacaatgaaggttgtatagggatattcactgcaattttgttctaa-----------aagc-----------aaattcatgaa--gggatcagttgaa-taaactattatatat--------------tcata----taaagattgcaaccagtaagaagaatgagacgtctg-----cattttctgacaagaaatgatttcctatacatatttaccatagaaaacaagttgtgtaaggaatgctac i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5701939 305 - 180051392 -----------GTACCTAGGACCTTCTgacacttccttat--gttgctggtggaa--gtatagattatta-aacctcttcatagg-----tgttttgg---caatacatatccaaataaaaaagtacagatgtgcacaatgaaggttgtatagggatattcactgcaatattgttctaa-----------aagc-----------aaattcatgaa--aggatcagttgaa-taaactattatatat--------------tcata----taaagactgcaaccattaagaagaatgagacgtctg-----catattctgac---aaatgatttcctatacatatttaccatagaaagcaagttgtgtaaggaatgctac i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5893733 305 - 181584905 -----------GTACCTAGGACCTTCTgacacttccttat--gttgctggtggaa--gtatagattatta-aacctcttcatagg-----tgttttgg---caatacatatccaaataaaaaagtacagatgtgcacaatgaaggttgtatagggatattcactgcaatattgttctaa-----------aagc-----------aaattcatgaa--aggatcagttgaa-taaactattatatat--------------tcata----taaagactgcaaccattaagaagaatgagacgtctg-----catattctgac---aaatgatttcctatacatatttaccatagaaagcaagttgtgtaaggaatgctac i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 922803 305 - 16193990 -----------GTACCTAGGACCTTCTgacacttccttat--gttgctggtggaa--gtatagattatta-aacctcttcatagg-----tgttttgg---caatacatatccaaataaaaaagtacagatgtgcacaatgaaggttgtatagggatattcactgcaatattgttctaa-----------aagc-----------aaattcatgaa--aggatcagttgaa-taaactattatatat--------------tcata----taaagactgcaaccattaagaagaatgagacgtctg-----catattctgac---aaatgatttcctatacatatttaccatagaaagcaagttgtgtaaggaatgctac i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1739811 308 - 21434487 -----------GTACCTAGGACCTTCTgacacttccttat--gttgctggtggaa--gtatagattatta-aacctcttcatagg-----tgttttgg---caatacatatccaaattaaaaagtacagatgtgcacaatgaaggttgtatagggatattcactgcaatattgttctaa-----------aagc-----------aaattcatgaa--gggatcagttgaa-taaactattatatat--------------tcata----taaagactgcaaccattaagaagaatgagacgtctg-----catattctgacaagaaatgatttcctatacatatttaccatagaaagcaagttgtgtaaggaatgctac i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4708701 308 - 82825804 -----------GTACCTAGGACCTTCTgacacttccttat--gttgctgatggaa--gtatagattatta-aacctcttcatagg-----tgttttgg---caatacatatccaaataaaaaagtacagatgtgcacaatgaaggttgtatagggatattcactgcaatattgttctaa-----------aagc-----------aaattcatgaa--tggatcagttgaa-taaactattatatat--------------tcata----taaagactgcaaccattaagaagaatgagacatctg-----catattctgacaagaaatgatttcctatacatatttaccatagaaagcaagttgtgtaaggaatgctac i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 203958 308 + 2521317 -----------GTACCTAGGACCTTCTgacacttccttat--gttgctggtggaa--gtatagattatta-aacctcttcatagg-----tgttttgg---caatacatatccaaataaaaaagtacagatgtgcacaatgaaggttgtatagggatattcactgcaatattgttctaa-----------aagc-----------aaattcatgaa--gggatcagttgaa-taaactattatatat--------------tcata----taaagactgcaaccattaagaagaatgagatgtctg-----catattctgacaagaaatgatttcctatacatatttaccatagaaagcaagttgtgtaaggaatgctac i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1694867 308 - 2415367 -----------GTACCTAGGAGCTTCTgacacttccttat--gttgctggtggaa--gtatagattatta-aacctcttcatagg-----tgttttgg---caatatatatccaaataaaaaagtacacatgtgcacaatgaaggttatatagggatattcactgcaatattgttctaa-----------aagc-----------aaattcatgaa--gggatcagttgaa-taaactattatatat--------------tcata----taaagactgcaaccattaagaaggatgagacgtctg-----catattctgacaagaaatgatttcctatacatatttaccatagaaagcaagttgtgtaaggaatgctac i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142764745 303 - 204313951 -----------GTCCCTAGGACCTTCTGACACTTCCTTAT--ATTCCTAGTGGAA--GTATAGATTGTTA-AACCTCTTCATAGG-----TATTTTGGCAACAACAGCtatccaaataagaaaatgcagatgtgcacaatgaaggttgtataggaatattcactgcaatattgttctaa-----------aagc-----------aaaTTC-TTAA--GGGATCAGTTGAA-TAAACTATTATCTAT--------------TCATA----GAAAGACTGCAATAATT-------ATGAGACATCTT-----CATATTCTGACAACAAATGATTTCCTATTCATATTTACCATAGAAAGCAAGTTGTGCAAGGAATGCTAC i calJac3.chr2 C 0 C 0 s aotNan1.NW_018501968v1 1100892 301 - 2246441 -----------GTACCTAGGACCTTCTgacacttccttat--attgctagtggaa--gtatagattgtta-aacctcttcaaagg-----tattttgg---caacatctatccaaataagaaaatgcagatgtgcaaaatgaaggttgtataggaatattcactgcaatattgttctaa-----------aagc-----------aaattcattaa--gggatcagttgaa-tacactattatctat--------------tcata----taaagactgcaatcatt-------atgcgacatctt-----catattctgacaagaaatgatttcctatacatatttaccatagaaagcaagttgtgcaaggaatgctac i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 694407 310 - 940639 -----------GTACTTAGGACCTTGTgacacttccttat--gttgctgctggag--gtgtagattattagaacctcttcacagg-----tgttttgg---caatatctatccagataaaacagtgcagacgtacccaatgaagtttgtatagagatagtcactgcaatattgttctaa-----------aagc-----------aaattcattaa-gggaatcagttgaa-taaactgttatatat--------------tcatataattaaagactgcatccattaagaaggatgagacatctg-----catattctgataagaaatgatttcc----tgtatttatCACAGAAAACAAGTTATGTAAGGAATGCTAC i proCoq1.NW_012152163v1 C 0 C 0 s otoGar3.GL873522 1192984 315 + 48283576 -----------GTATTTAAGACCTTGTgacacttccttat--atggctggtgaaa--ctgtagattgttagaacatcttcaaaggtgttttgttttga---caatatctatccaaataaaagagtgcagatgtgcacattgaagtttgtatagggatggtcactgcagtattgttctaa-----------aagc-----------aaaTTAATTAACgggcatcagttgaa-tgaactattacatat--------------tcatataattaaagaccatagccattaagaaaaataaaacatctg-----catattctgat---aaatgatttctta--tatatttatcatagaaagcaatttatgtaaggaatgctac i otoGar3.GL873522 C 0 C 0 s mm10.chr13 65950263 294 - 120421639 -----------TTATTTAGGATCT----ATATTTCCTTAT--ATGGATGGT-------TGCAGATTCTTAGAAACTCCTCTTTAA-----TTGTTTTA---TAACAC-TACCCAA---AGAAAGTGCACA-GTGCATAATGAAGATTGTATAGGGATATTCATTGCAAT-------------------------------------AATTCATTAA--GGAAGCAACTGAATTAAACTATTATACTTCTCCAACTGAGCTATTGTG----CAAGACCCCTTCTCAAGGAAAAAAAAGAAAAGAACAAAAATCAATCCCCAACTAGAAGT------CTATATATATTTATGAAAGACAGCAAATTATGTAAGGAAGGCTGC i mm10.chr13 C 0 I 2082 s dasNov3.JH562710 209239 280 - 960158 GTTTTCAGGTTTTACTTAAGACCCTG-------CCCCCAT--GTTGCTAGTAGAAGTGTGTAGATTATTA-AACCTGTTCATAGG-----CATTTTGG---CAATATCTAGCCAAAT---AAAGTgcatatgtatgctatgaagtttgtatacagatattcactgcaatattgttctaa-----------aagcatggatgctaaatatccattaa-ggggatcagtgaaa-taaaccatgatacat--------------ctatatcattaaagtctgcatccagtaagaat-atagcagctctg-----catataccaat----------------------------------------------aaggaatgCTAC i dasNov3.JH562710 C 0 C 0 e canFam3.chr4 37128628 373 + 88276631 I a score=13600.000000 s hg38.chr5_KI270795v1_alt 8588 1 + 131892 c s panTro5.chr5 5257209 1 - 181907262 c i panTro5.chr5 C 0 C 0 s panPan2.chr5 5519596 1 - 183735486 c i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1617168 1 + 3967317 C i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4468831 1 + 163208435 c i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5702244 1 - 180051392 c i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5894038 1 - 181584905 c i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 923108 1 - 16193990 c i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1740119 1 - 21434487 c i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4709009 1 - 82825804 c i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 204266 1 + 2521317 c i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1695175 1 - 2415367 c i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142765048 1 - 204313951 C i calJac3.chr2 C 0 C 0 s aotNan1.NW_018501968v1 1101193 1 - 2246441 c i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 694717 1 - 940639 C i proCoq1.NW_012152163v1 C 0 I 192 s otoGar3.GL873522 1193299 1 + 48283576 c i otoGar3.GL873522 C 0 I 1 s dasNov3.JH562710 209519 1 - 960158 C i dasNov3.JH562710 C 0 C 0 e mm10.chr13 65950557 2082 - 120421639 I e canFam3.chr4 37128628 373 + 88276631 I a score=1633141.000000 s hg38.chr5_KI270795v1_alt 8589 186 + 131892 -ttttt----gg--cagtgtgttgggagaggttatgcacacacctatctacctt-gcccaggtgctt------acttacactgtctctggaaggccacacaagaaatttaac-------tttttcagaagagaagtttggggacacaggatggagggaa----gcttttcaatctattcccttttatacattttac-atttgttaccaagtg s panTro5.chr5 5257210 186 - 181907262 -ttttt----gg--cagtgggttgggggaggttatgcacacacctatctacctt-gcccaggtgctt------acttacactgtctctggaaggccacacaagaaatttaac-------tttttcagaagagaagtttggggacacaggatggagggaa----gcttttcaatctattcccttttatactttttac-atttgttaccaagtg i panTro5.chr5 C 0 C 0 s panPan2.chr5 5519597 186 - 183735486 -ttttt----gg--cagtgggttgggggaggttatgcacacacctatctacctt-gcccaggtgctt------acttacactgtctctggaaggccacacaagaaatttaac-------tttttcagaagagaagtttggggacacaggatggagggaa----gcttttcaatctattcccttttatactttttac-atttgttaccaagtg i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1617169 185 + 3967317 -TTTTT----GG--CAGTGGGTTGGG-GAGGTTATGCACACACCTATCTACCTT-GCCCAGGTGCTt------gcttacactgtctctggaaggccacacaagaaatttaac-------tttttcagaagagaagtttggggacacaggatggagggaa----acttttcaatctattcccttttatactttttac-atttgttaccaagtg i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4468832 186 + 163208435 -ttttt----gg--cagtgggttgggggaggttatgcacacacctatctacttc-tccaaggtgctt------acttgcactgtctctggaaggccacacaagaaatttaac-------gttttcagaagagaagtttggggacacaggatggagggaa----acttttcaatctattcccttttatactttttat-atttgttaccaagtg i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5702245 186 - 180051392 -ttttt----gg--cagtggtttgggggaagttatgcacacacctatctacctc-atcagggtgctt------acttacactgtctctggaaggccacacaagaaattcaag-------tttttcagaagagaagtttggggacacaggatggagggaa----acttttcaatctattcccttttatactttttac-atttgttgccaagtg i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5894039 186 - 181584905 -ttttt----gg--cagtggtttgggggaagttatgcacacacctatctacctc-atcagggtgctt------acttacactgtctctggaaggccacacaagaaattcaag-------tttttcagaagagaagtttggggacacaggatggagggaa----acttttcaatctattcccttttatactttttac-atttgttgccaagtg i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 923109 186 - 16193990 -ttttt----gg--cagtggtttgggggaagttatgcacacacctatctacctc-atcagggtgctt------acttacactgtctctggaaggccacacaagaaattcaag-------tttttcagaagagaagtttggggacacaggatggagggaa----acttttcaatctattcccttttatactttttac-atttgttgccaagtg i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1740120 186 - 21434487 -ttgtt----gg--cagtgggttgggggagattatgcacacacctatctacctc-gtcagggtgctt------acttacactgtctctggaaggccacacaagaaattcaag-------tttttcacaagagaagtttggggacacaggatggagggaa----acttttcaatctattcccttttatactttttac-atttgttgccaagtg i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4709010 186 - 82825804 -ttttt----gg--cagtgggttgggggaggttatgcacacacctatctacctc-gtcagggtgctt------acttacactgtctctggaaggccacacaagaaattcaag-------tttttcagaagagaagtttggggacacaggatggagggaa----acttttcaatctattcccttttatactttttac-atttgttgccaagtg i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 204267 186 + 2521317 -ttttt----gg--cagtgggttggggaaggttatgcacacacctatctacctc-atcagggtgctt------acttacactgtctctggaaggccacacaagaaattcaag-------tttttcagaagagaagtttggggacacaggatggagggaa----acttttcaatctattcccttttatactttttac-atttgttgccaagtg i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1695176 186 - 2415367 -ttttt----gg--cagtgggttgggggaggttatgcacacacctatctacctt-gtcagggtgctt------acttacactgtctctggaaggccacacaagaaattcaag-------tttttcagaagagaagtttggggacacaggatggagggaa----gcttttcaatctattcccttttatactgtttac-atttgttgccaagtg i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142765049 188 - 204313951 -TTTTT----GGAAAAGGGGTTGCGGGGAGGTTATGCACACACCTATCTACCTC-GCCAAGGTGCTT------ACTTACATTGCCTCTGGAAGGCCACACAAGAAATTTAAC-------TTTTTCAGAAGAGGAGTTTGGAGACACGGGATGGAGGGAA----ACTTTTCAGTCTATTCCCTTTTATATGTTTTAT-ACTTGTTACCAAGTA i calJac3.chr2 C 0 C 0 s aotNan1.NW_018501968v1 1101194 188 - 2246441 -ttttt----ggaaaaggggttggggggaggttatgcacatacctatctacctc-accaaggtgctt------acttacattgtctctggaaggccacacaagaaatttaac-------tttttcagaagaggagtttggagacacgggatggagggaa----acttttcagtctatccccttttatatgttttac-acttgttaccaagta i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1193301 191 + 48283576 -tttttgcaggg--taggggaagaaggaaggttatacacacgtc--tctatctctgccaaagtgctt------atttacactg--tctagagtgccacacaggatatttaac--gatattttttcagaaggggcgtttaaggacacgaaatggagggaa----acttttcactctataccc-tttgcacagtttat-atttgttaccaagtg i otoGar3.GL873522 I 1 C 0 s dasNov3.JH562710 209520 199 - 960158 ATTTTG----GG------GGACTGAAGGA---TATACACACATCTACCTACCACTCCCAAGGtgcttgctttcacttacactaactctggaaagccatccaagaaattaaaaatattttctttacggaagaggaatttgggtacaacagagggagagtgacttactttttacactattcctttttaaaatttttccaaattgtcaccaaatg i dasNov3.JH562710 C 0 C 0 e mm10.chr13 65950557 2082 - 120421639 I e canFam3.chr4 37128628 373 + 88276631 I e proCoq1.NW_012152163v1 694718 192 - 940639 I a score=240079.000000 s hg38.chr5_KI270795v1_alt 8775 28 + 131892 cacgtgttgccttttaaaaa-------TTGGGTTT s panTro5.chr5 5257396 28 - 181907262 cacgtgctgccttttaaaaa-------TTGGGTTT i panTro5.chr5 C 0 C 0 s panPan2.chr5 5519783 28 - 183735486 cacgtgctgccttttaaaaa-------TTGGGTTT i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1617354 28 + 3967317 cacgtgttgccttttaaaaa-------CTGGGTTT i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4469018 28 + 163208435 cacgtgttgtcttttaaaaa-------TTGGGTTT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5702431 28 - 180051392 cacgtgttgccttttaaaaa-------CTGGATTT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5894225 28 - 181584905 cacgtgttgccttttaaaaa-------TTGGATTT i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 923295 28 - 16193990 cacgtgttgccttttaaaaa-------TTGGATTT i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1740306 28 - 21434487 cacgtgttgccttttaaaaa-------TTGGATTT i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4709196 28 - 82825804 cacgtgttgccttttaaaaa-------TTGGATTT i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 204453 28 + 2521317 cacgtgttgccttttaaaaa-------TTGCATTT i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1695362 28 - 2415367 cacgtgttgccttttaaaaa-------TTGGATTT i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142765237 28 - 204313951 CACATGTTACCTTTTAAAAA-------CTTTTTTT i calJac3.chr2 C 0 C 0 s aotNan1.NW_018501968v1 1101382 28 - 2246441 cacatgttaccttttaaaaa-------CTGTTTTT i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1193492 35 + 48283576 cacgtgttacatttaaaaaaACAAAAGATTCATTT i otoGar3.GL873522 C 0 C 0 s canFam3.chr4 37129001 25 + 88276631 caggGGCTGCCCCT---AAA-------ATTTGTTT i canFam3.chr4 I 373 C 0 s dasNov3.JH562710 209719 28 - 960158 catgtgttaccttttaaaaa-------acaaGATT i dasNov3.JH562710 C 0 I 2324 e mm10.chr13 65950557 2082 - 120421639 I e proCoq1.NW_012152163v1 694718 192 - 940639 I a score=1088294.000000 s hg38.chr5_KI270795v1_alt 8803 118 + 131892 TT--------------AAACACATTTACCACTA-----CT-ACTCACCACCAAAACCTTCCC----CCCTCAGCTCTTCTCCAGGGCCTTGACTGGCGCTGGCAGCTCACCACCCCTTTTTTCTCCAGCAAGA--------AGCCACTGG------------------ s panTro5.chr5 5257424 118 - 181907262 TT--------------AAACACATTTACCACTA-----CT-ACTCACCACCAAAACCTTCCC----CCCTCAGCTCTTCTCCAGGGCCTTGACTGGCGCTGGCAGCTCACCACCCCTTTTTTCTCCAGCAAGA--------AGTCACTGG------------------ i panTro5.chr5 C 0 C 0 s panPan2.chr5 5519811 118 - 183735486 TT--------------AAACACATTTACCACTA-----CT-ACTCACCACCAAAACCTTCCC----CCCTCAGCTCTTCTCCAGGGCCTTGACTGGCGCTGGCAGCTCACCACCCCTTTTTTCTCCAGCAAGA--------AGTCACTGG------------------ i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1617382 117 + 3967317 TT--------------AAACACATTTACCACTA-----CT-ACTCACCACCAAAACCTTCCC----CCCTCAGCTCTTCTCCAGGGCCTTGACTGGCGCTGGC-GCTCACCACCCCTTTTTTCTCCAGCAAGA--------AGCCACTGG------------------ i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4469046 122 + 163208435 TT--------------AAACACATTTACCACTA-----CT-ACTCACCATCAAAACCTTCCCCCATCCCTCAGCTCTTCTCCAGGGCCTTGACTGGCACTGGCAGCTCACCACCCCTTTTTTCTCCAGCAAGA--------AGCCACTGG------------------ i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5702459 122 - 180051392 TT--------------AAACAAATTTACCACTA-----CT-ACTTACCACCAAAACCTTCCCCCATTCCTCAGCTCTACTCCAGGGCCTTGACTGGTGCTGACAGCTCACCACCCCTTTTTTCTCCAGCAAGA--------AGCCACTGG------------------ i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5894253 122 - 181584905 TT--------------AAACAAATTTACCACTA-----CT-ACTTACCACCAAAACCTTCCCCCATTCCTCAGCTCTACTCCAGGGCCTTGACTGGTGCTGACAGCTCACCACCCCTTTTTTCTCCAGCAAGA--------AGCCACTGG------------------ i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 923323 122 - 16193990 TT--------------AAACAAATTTACCACTA-----CT-ACTTACCACCAAAACCTTCCCCCATTCCTCAGCTCTACTCCAGGGCCTTGACTGGCGCTGACAGCTCACCACCCCTTTTTTCTCCAGCAAGA--------AGCCACTGG------------------ i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1740334 122 - 21434487 TT--------------AAACAAATTTACCACTA-----CT-ACTTACCACCAAAACCTTCCCCCATTCCTCAGCTCTTCTCCAGGGCCTTGACTGGCGCTGACAGCTCACCACCCCTTTTTTCTCCAGCAAGA--------AGCCACTGG------------------ i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4709224 122 - 82825804 TT--------------AAACAAATTTACCACTA-----CT-ACTTACCACCAAAACCTTCCGCCATTCCTCAGCTCTTCTCTAGGGCCTTGACTGGCGCTGACAGCTCACCACCCCTTTTTTCTCCAGCAAGA--------AGCCACTGG------------------ i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 204481 122 + 2521317 TT--------------AAACAAATTTACCACTA-----CT-ACTTACCACCAAAACCTTCCCCCATTCCTCAGCTCTTCTCCAGGGCCTTGACTGGCGCTGACAGCTCACCACCCCTTTTTTCTCCAGCAAGA--------AGCCACTGG------------------ i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1695390 122 - 2415367 TT--------------AAACAAATTTACCACTA-----CT-ACTTACCACCAAAACCTTCCCCCATTCCTCAGCCCTTCTCCAGGGCCTTGACTGGCGCTGACAGCTCACCACCCCTTTTTTCTCCAGCAAGA--------AGCCACTGG------------------ i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142765265 124 - 204313951 TTTT------------AAACAAATTTACCACCA-----CT-TCTCACCACCAAAACCTTCCCCCATCCCTTAGCTCTTCTCCAGGGCTTTGACTAGTGCTGGCAGCTCACCACCCCTTTTTTCTCCAGCAAGA--------AGCCACTGG------------------ i calJac3.chr2 C 0 C 0 s aotNan1.NW_018501968v1 1101410 136 - 2246441 TTTTTTTTAAAAAAAAAAACAAATTTACCACTA-----CT-TCTTACCACCAAAACCTTCCCCCATCCCTTAGCTCTTCTCCAGGGACTTGACTAGTGCTGGCAGCTCACCAGCCCTTTTTTCTCCAGCAAGA--------AGCCACTGG------------------ i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1193527 123 + 48283576 CT--------------TAACAAATTTGCTACTG----CCT-CCTCACCACCGAACACCTCCTAAACCTCACATCTTATCTTCAGGGCTTTGGCTG--------AGATCACCGCGAGTTTCTTCTCCAGCAAGAGTCTTCTGGGTGTCTGG------------------ i otoGar3.GL873522 C 0 C 0 s canFam3.chr4 37129026 120 + 88276631 TT--------------AAACAAATTTCCACCCA-----CCGGCTTAACACCAAAACCCTCCCCGAGGCCACAGTCCTTCTCCAGGGCCTTGGTTGGCTCTGGCAGCTCATTA---GTTGTTTCTTCAGCAGGA--------AACTGCTGG------------------ i canFam3.chr4 C 0 I 1162 s dasNov3.JH562710 212071 129 - 960158 TT--------------AAACAAATTT----CTAGGTCCCT-CCTCACCGTAAAAACCTGCCC---TCACTCGGCCCTTTTCAAGGGCCTTGATGGATGCTG---GCTCACCACCC-----TGGTCCAGCC-GA--------AGTCACTGGACGCCACTGGACGTCTGG i dasNov3.JH562710 I 2324 C 0 e mm10.chr13 65950557 2082 - 120421639 I e proCoq1.NW_012152163v1 694718 192 - 940639 I a score=841406.000000 s hg38.chr5_KI270795v1_alt 8921 96 + 131892 TTTAAGGGAGATATG----------------AGAGGTGGGGT-----------------GG--ATACGCAGGTGGACAttt-acttttcactctatatcttttatttttat------a-tttACAATCATGTGCATGTA s panTro5.chr5 5257542 96 - 181907262 TTTAAGGGAGATATG----------------AGAGGTGGGGT-----------------GG--ATACGCAGGTGGACAttt-acttttcactctatatcttttatttttat------a-tttaCAATCATGTGCATGTA i panTro5.chr5 C 0 C 0 s panPan2.chr5 5519929 96 - 183735486 TTTAAGGGAGATATG----------------AGAGGTGGGGT-----------------GG--ATACGCAGGTGGACAttt-acttttcactctatatcttttatttttat------a-tttaCAATCATGTGCATGTA i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1617499 96 + 3967317 TTTAAGGGAGATATG----------------AGAGGTGGGGT-----------------GG--ATACGCAGGTGGACACTT-ACTTTTCACTCTATATCTTTTATTTTTAT------A-CTTACAATCATGTGCATGTA i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4469168 96 + 163208435 TTTAAGGGAGATATG----------------AGAGGTGGGGT-----------------GG--ATATGCAGGTGGACATTT-ACTTTTCACGCTATATCTTTTATTTTTAT------A-TTTACAATCATGTGCATGTA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5702581 96 - 180051392 TTTAAGGGAGATATG----------------AAAGGTGGGCT-----------------GG--ATACACAGGTGGACAttt-acttttcactctgtatcttttatttttat------a-tttaCAATCATGTGCACGTA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5894375 96 - 181584905 TTTAAGGGAGATATG----------------AAAGGTGGGCT-----------------GG--ATACACAGGTGGACAttt-acttttcactctgtatcttttatttttat------a-tttaCAATCATGTGCATGTA i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 923445 96 - 16193990 TTTAAGGGAGATATG----------------AAAGGTGGGCT-----------------GG--ATACACAGGTGGACAttt-acttttcactctgtatcttttatttttat------a-tttaCAATCATGTGCATGTA i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1740456 96 - 21434487 TTTCAGGGAGATATG----------------AAAGGTGGGGT-----------------GG--ATACGCAGGTGGACAttt-acttttcactctgtatcttttatttttat------a-tttaCAATCATGTGCATGTA i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4709346 96 - 82825804 TTTAAGGGAGATATG----------------AAAGGTGGGGT-----------------GG--ATACGCAGGTGGACAttt-acttttcactctgtatcttttatttttat------a-tttaCAATCATGTGCATGTA i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 204603 96 + 2521317 TTTCAGGGAGATATG----------------AAAGGTGGGTT-----------------GG--ATACGCAGGTGGACATTT-ACTTTTCACTCTGTGTCTTTTATTTTTAT------A-TTTACAATCATGTGCATGTA i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1695512 96 - 2415367 TTTAAGGGAGATATG----------------AAAGGTGGGGT-----------------GG--ATACGCAGGTGGACAttt-acttttcactctgtatcttttatttttat------a-tttaCAATCATGTGCATGTA i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142765389 98 - 204313951 TTTAAGGGAAATAGG----------------AGAGGTGGGGT-----------------GGAAATACTCAGGTGGACATTT-ACTTTTCACTCtatatattttatttttat------a-tttaCAATCATGTGCATGTA i calJac3.chr2 C 0 C 0 s aotNan1.NW_018501968v1 1101546 98 - 2246441 TTTAAGGGAAATATG----------------AGAGGTGGGGT-----------------GGAAATACTCAGGTGGACATTT-ACTTTTCACTCTATATATTTTATTTTTAT------A-TTTACAATCATGTGCATGTA i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1193650 120 + 48283576 TTTAAGAGAGATGTG----------------AGAGGTAGGGCATAGGTGGTGGTGGGAGGA--ACAAACAGGTGGACATTTAACTTTTCATTCTCCATCTTTTATGTTTATTTTTGCA-TTTACAATTATGGACATGTA i otoGar3.GL873522 C 0 C 0 s dasNov3.JH562710 212200 100 - 960158 TCTAAGGGAGGGGTGTGGGCAGTGGGGAACTGGAAAGGGGGC-----------------GG--GGCCATGGGCGGACACTT-ACTTTTC-------------CACTTCTAT------GCCCTTAAATCATATGCATGTA i dasNov3.JH562710 C 0 I 5 e mm10.chr13 65950557 2082 - 120421639 I e canFam3.chr4 37129146 1162 + 88276631 I e proCoq1.NW_012152163v1 694718 192 - 940639 I a score=9555.000000 s hg38.chr5_KI270795v1_alt 9017 1 + 131892 A s panTro5.chr5 5257638 1 - 181907262 A i panTro5.chr5 C 0 C 0 s panPan2.chr5 5520025 1 - 183735486 A i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1617595 1 + 3967317 A i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4469264 1 + 163208435 A i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5702677 1 - 180051392 A i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5894471 1 - 181584905 A i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 923541 1 - 16193990 A i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1740552 1 - 21434487 A i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4709442 1 - 82825804 A i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 204699 1 + 2521317 A i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1695608 1 - 2415367 A i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142765487 1 - 204313951 A i calJac3.chr2 C 0 C 0 s aotNan1.NW_018501968v1 1101644 1 - 2246441 A i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1193770 1 + 48283576 A i otoGar3.GL873522 C 0 C 0 e mm10.chr13 65950557 2082 - 120421639 I e canFam3.chr4 37129146 1162 + 88276631 I e proCoq1.NW_012152163v1 694718 192 - 940639 I e dasNov3.JH562710 212300 5 - 960158 I a score=1400023.000000 s hg38.chr5_KI270795v1_alt 9018 191 + 131892 TACtgttacaggaaaagggtcccaatccagaccccaggagtgggttcttggatctcactcaggaaagaattcagggcaagtccgcagtgcaaagtgaaagcaagtttattaagaaagtaaagggaataaaagaatggccactccatagacagagcagccccgagggccgctggttgcgcatttttatggtt s panTro5.chr5 5257639 191 - 181907262 TACtgttacaggaaaagggtcccaatccagaccccaggagtgggttcttggatctcactcaggaaagaattcagggcaagtccgcagtgcaaagtgaaagcaagtttattaagaaagtaaagggaataaaagaatggccactccatagacagagcagccccgagggccgctggttgcgcatttttatggtt i panTro5.chr5 C 0 C 0 s panPan2.chr5 5520026 191 - 183735486 TACtgttacaggaaaagggtcccaatccagaccccaggagtgggttcttggatctcactcaggaaagaattcagggcaagtccgcagtgcaaagtgaaagcaagtttattaagaaagtaaagggaataaaagaatggccactccatagacagagcagccccgagggccgctggttgcgcatttttatggtt i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1617596 190 + 3967317 TACtgttaca-gaaaagggtcccaatccagaccccaggagtgggttcttggatctcactcaggaaagaattcagggcaagtccgcagtgcaaagtgaaagcaagtttattaagaaagtaaagggaataaaagaatggccactccatagacagagcagccccgagggccgctggttgcgcatttttatggtt i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4469265 191 + 163208435 TACtgttacaggaaaagggtcccaatccagaccccaagagtgggttcttggatctcagtcaagaagggattcagggcgagtccgcagtgcaaagtgaaagtaagtttgttaagaaagtaaagggaataaaagaatggccactccatagacagagcagccccgagggctgctggttgcccatttttatgggt i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5702678 187 - 180051392 TACtgttacagggaaagggtcccaatccagaccccaagagtaggttcttggttctcactcaagaaagaattcagggcgagtctgtagggcaaagtgaaagcaagtttattaagaaagtaaagggaataaaagaatggccactccat----agagcagcccccagggctgctggttgcgcatttttatggat i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5894472 187 - 181584905 TACtgttacagggaaagggtcccaatccagaccccaagagtaggttcttggttctcactcaagaaagaattcagggcgagtctgtagggcaaagtgaaagcaagtttattaagaaagtaaagggaataaaagaatggccactccat----agagcagcccccagggctgctggttgcgcatttttatggat i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 923542 187 - 16193990 TACtgttacaggaaaagggtcccaatccagaccccaagagtaggttcttggatctcactcaagaaagaattcagggcgagtctgtagggcaaagtgaaagcaagtttattaagaaagtaaagggaataaaagaatggccactccat----agagcagcccccagggctgctggttgcgcatttttatggtt i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1740553 187 - 21434487 TACtgttacaggaaaagggtcccaatccagaccccaagagtgggttcttggatctcactcaagaaagaattcagggcgagtctgcagggcaaagtgaaagcaagtttattaagaaagtaaagggaataaaagaatggccactccat----agagcagctccgagggctgctgcttgtgcatttttatggtt i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4709443 187 - 82825804 TACtgttacaggaaaagggtcccaatccagacctcaagagtgggttcttggatctcactcaagaaagaattcagggcgagtctgcagggcaaagtgaaagcaagtttattaagaaagtaaagggaataaaagaatggccactccat----agagcagccccgagggctgctggttgtgcatttttatggtt i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 204700 187 + 2521317 TACtgttacaggaaaagggtcccaatccagaccccaagagtgggttcttggatctcactcaggaaagaattcagggcgagtctgcagggcaaagtgaaagcaagtttattaagaaagtaaagggaataaaagaatggccactccat----agagcagctctgagggctgctgcttgtgcatttttatggtt i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1695609 180 - 2415367 TACTGTTAC-------Tggtcccaatccagaccccaagagtgggttcttggatctcactcaagaaagaattcagggtgagtctgcagggcaaagtgaaagcaagtttattaagaaagtaaagggaataaaagaatggccactccat----agggcagccccgagggctgctggttgcgcatttttatggtt i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142765488 184 - 204313951 CACtgttacaggaaaagggtcccgatccagacctcaagag--ggttcttggatcttgctcaagaaagaattcagggtgagcctgcagtgcaaagtgaaagcaagtttgttaagaaagtaaa-ggaataaaagaatggctattccat----agagcagccctgagggctgctggttgcacatatttatagtt i calJac3.chr2 C 0 C 0 s aotNan1.NW_018501968v1 1101645 188 - 2246441 CACtgttacaggaaaagggtcccgatccagacctcaagag--ggttcttggatcttactcaagaaagaattcagagtgagcctgcagtgcaaagtgaaagcaagtttgctaagaaagtaaa-ggaataaaagcatggctattccatagacagagcagccctgagggctgctggttgcacatatttatagtt i aotNan1.NW_018501968v1 C 0 I 485 e mm10.chr13 65950557 2082 - 120421639 I e otoGar3.GL873522 1193771 0 + 48283576 C e canFam3.chr4 37129146 1162 + 88276631 I e proCoq1.NW_012152163v1 694718 192 - 940639 I e dasNov3.JH562710 212300 5 - 960158 I a score=64890.000000 s hg38.chr5_KI270795v1_alt 9209 7 + 131892 tttcctg s panTro5.chr5 5257830 7 - 181907262 tttcctg i panTro5.chr5 C 0 C 0 s panPan2.chr5 5520217 7 - 183735486 tttcctg i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1617786 7 + 3967317 tttcctg i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4469456 7 + 163208435 tttcctg i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5702865 7 - 180051392 tttcctg i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5894659 7 - 181584905 tttcctg i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 923729 7 - 16193990 tttcctg i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1740740 7 - 21434487 tttcctg i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4709630 7 - 82825804 tttcctg i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 204887 7 + 2521317 tttcctg i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1695789 7 - 2415367 tttcctg i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142765672 7 - 204313951 atttctG i calJac3.chr2 C 0 I 1423 s saiBol1.JH378186 2165235 7 + 10068113 tttcctg i saiBol1.JH378186 N 0 C 0 s aotNan1.NW_018501968v1 1102318 7 - 2246441 tttcctg i aotNan1.NW_018501968v1 I 485 C 0 e mm10.chr13 65950557 2082 - 120421639 I e otoGar3.GL873522 1193771 0 + 48283576 C e canFam3.chr4 37129146 1162 + 88276631 I e proCoq1.NW_012152163v1 694718 192 - 940639 I e dasNov3.JH562710 212300 5 - 960158 I a score=2669499.000000 s hg38.chr5_KI270795v1_alt 9216 354 + 131892 atgatatgctaaacaa--gtggtggatta-ttcatgcctccc-ttttttagaccgtat--agggtaacttcctgacgttgccatggcatttacaaactgtcctggcactggtgggagtgtagaggtgaggatgaccagaggtcactctcatcgccattttggttttggtgggttttggccggttcctttactgcaacctgttttatcatcaaggtctttatgacctgtattttgtgctgacctcctatttcatcctgtgattagaatgccttaacagtctgggaatgcagcccagtaggtttaagcctcatttcacccagttcctatttaagatagagttgctctggttcacacgcctct s panTro5.chr5 5257837 354 - 181907262 atgatatgctaaacaa--gtggtggatta-ttcatgcctccc-ttttttagaccgtat--agggtaacttcctgacgttgccatggcatttacaaactgtcctggcactggtgggagtgtagcagtgaggatgaccagaggtcactctcatctccattttggttttggtgggttttggccggttcctttactgcaacctgttttatcatcaaggtctttatgacctgtattttgtgctgacctcctatttcatcctgtgattagaatgccttaacagtctgggaatgcagcccagtaggcttaagcctcattttacccagttcctatttaagatagagttgctctggttcacacgcctct i panTro5.chr5 C 0 C 0 s panPan2.chr5 5520224 354 - 183735486 atgatatgctaaacaa--gtggtggatta-ttcatgcctccc-ttttttagaccgtgt--agggtaacttcctgacgttgccatggcatttacaaactgtccgggcactggtgggagtgtagcagtgaggatgaccagaggtcactctcatctccattttggttttggtgggttttggccggttcctttactgcaacctgttttatcatcaaggtctttatgacctgtattttgtgctgacctcctatttcatcctgtgattagaatgccttaacagtctgggaatgcagtccagtaggcttaagcctcattttacccagttcctatttaagatagagttgctctggttcacacgcctct i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1617793 356 + 3967317 atgatatgctaaacaa--gtggtggatta-ttcaggcctccc-ttttttagacagtatacagggtaacttcctgacgttgccatggcatttacaaactgacctggcactggtgggagtgtagcagtgagaatgaccagaggtcactctcatcgccattttggttttggtgggttttggccggttcctttactgcaacctgttttatcatcaaggtctttatgacctgtattttgtgctgacctcctatttcatcctgtgattagaatgccttaacagtctgggaatgcagcccagtaggcttaagcctcattttacccagttcctatttaagatagagttgctctggttcacacgcctct i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4469463 354 + 163208435 atgatatgctaaacaa--atggtggatta-ttcatgcctccc-ttttttagaccatat--agggtaacttcctgacgttgccatggcatttacaaactgtcctggcactggtgggagtgtagcagtgaggatgaccagaggtcactctcgtcactattttggttttggtgggttttggccggctcctttactgcaagctgttttatcatcaaggtctttatgacctgtattttgtgctgacctcctatttcatcctgtgattagaatgccttaacagtctgggaatgcagcccagtaggtttaagcctcattttactcagttcctatttaagatagagttgctctggttcacacgcctct i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5702872 356 - 180051392 atgatctgctaaacaagtgtggtggatta-ttcacgcctccc-ttttttagaccatat--agggtaacttcctgacattgccatggcgtttataaactatcctggcactggtgggagtgtagcagtgaggatgaccagaggtcaatcttgtcgccattttggttttggtgggtttcagccggccccgttactgcaacctgttttatcgtcaaggtctttatgacctgtattttgtgctgaccttctatttcatcctgtgattagaatgccttaacagtctgggaatgcaacccagtaggtttcagcctcattttacccagttcctatttaagatggagttgctgcggttcacacgcttcc i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5894666 356 - 181584905 atgatctgctaaacaagtgtggtggatta-ttcacgcctccc-ttttttagaccatat--agggtaacttcctgacattgccatggcgtttataaactatcctggcactggtgggagtgtagcagtgaggatgaccagaggtcactctcgtcgccattttggttttggtgggtttcagccggccccgttactgcaacctgttttatcgtcaaggtctttatgacctgtattttgtgctgccctcctatttcatcctgtgattagaatgccttaacagtctgggaatgcaacccagtaggtttcagcctcattttacccagttcctatttaagatggagttgctgcggttcacacgcttcc i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 923736 356 - 16193990 atgatctgctaaacaagtgtggtggatta-ttcacgcctccc-ttttttagaccatat--agggtaacttcctgacattgccatggcgtttataaactatcctggcactggtgggagtgtagcagtgaggatgaccagaggtcactctcgtcgccattttggttttggtgggtttcagccggccccgttactgcaacctgttttatcgtcaaggtctttatgacctgtattttgtgctgacctcctatttcatcctgtgattagaatgccttaacagtctgggaatgcaacccagtaggtttcagcctcattttacccagttcctatttaagatggagttgctgcgggtcacacgcttcc i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1740747 356 - 21434487 atgatctgctaaacaagtgtggtggatta-ttcacgcctccc-ttttttagaccatat--agggtaacttcctgacattgccatggcgtttataaactatcctggcactggtgggagtgtagcagtgaggatgaccagaggtcactctcgccgccattttggttttggtgggttttggccggtcctgttactgcaacctgttttatcatcaaggtctttatgacctgtattttgtgctgacctcctatttcatcctgtgattagaaggccttaatagtctgggaatgcaacccagtaggtttcagccttattttacccagttcctatttaagatagagttgctgtggttcacacgcttcc i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4709637 356 - 82825804 atgatctgctaaacaagtgtggtggatta-ttcatgcctccc-ttttttagaccatat--agggtaacttcctgacattgccatggcgtttataaactatcctggcactggtgggagtgtagcagtgaggatgaccagaggtcactctcgtcgccattttggttttggtgggttttggccggccccgttgctgcaacctgttttatcatcaaggtctctatgacctgtattttgtgctgacctcctatttcatcctgtgattagaatgccttaacagtctgggaatgcaacccagtaggtttcagcctcattttacccagttcctatttaagatagagttgctgtggttcacacgcttcc i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 204894 356 + 2521317 atgatctgctaaacaagtgtggtggatta-ttcacgcctccc-ttttttagaccatat--agggtaacttcctgacattgccatggcgtttataaactatcctggcactggtgggagtgtagcagtgaggatgaccagaggtcactctcgccgccattttggttttggtggattttggccggtcctgttactgcaacctgttttatcatcaaggtctttatgacctgtattttgtgctgacctcctatttcatcctgtgattagaaggccttcatagtctgggaatgcaacccagtaggtttcagcctcattttacccagttcctatttaagatagagttgctgtggttcacacgcttcc i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1695796 356 - 2415367 atgatctgttaaacaagtgtggtggatta-ttcacacctccc-tttttcagaccatag--agggtaacttcctgacattgccatggcgtttataaactatcctggcactggtgggagtgtagcagtgaggatgaccagaggtcactctcgtcgccattttggttttggtgggttttggccggcccctttactgcaacctgttttatcatcaaggtttttatgacctgtattttgtgctgacctcccatttcatcctgtgattagaatgccttaacagtctgggaatgcaatccagtaggtttcagcctcattttacccagttcctatttaagatagagttgctgtggttgacacgcttct i colAng1.NW_012115755v1 C 0 I 311 s saiBol1.JH378186 2165242 350 + 10068113 ataatatgttaaacaa--ggggtgaactatttcacgcctccc-ttttttggaccatat--agggtacc-tactgaccttgccatggcatttataaactatcctggtactggtgggagtgtagcagtgaggacgaccagaggtcactcatgtcattattttggttttggtgggttttggctggctcctttactgcagactgttttatcaccaagg----tatcaactgtattttgtgctgaccttctatttcatcctgtgattagaatgccttaactgtctgggaaagtagcccggtaggtttcagcctcatttcgcccagctcctatttaagatggagttgctccggttcacacgcctct i saiBol1.JH378186 C 0 C 0 s aotNan1.NW_018501968v1 1102325 351 - 2246441 atgatatgttaaacaa--ggggtgaactatttcatgcctccctttttttggaccatat--agggtaac-tactgaccttgccatggcatttacaaactatcctggtactggtgggagtgtagcagtgaggacgaccagaggtcactcatgtcattattttggttttggtgggttttggctggcttctttactgcaaactgttttatcatcaagg----tatgaactgtattttgtgctgacctcctatttcatcctgtgattagaatgccttaaccgtctgggaatgtagcccggtaggtttcagcctcattttacccagctcctatttaagatggagttgctccggttcacacgcctct i aotNan1.NW_018501968v1 C 0 C 0 e mm10.chr13 65950557 2082 - 120421639 I e calJac3.chr2 142765679 1423 - 204313951 I e otoGar3.GL873522 1193771 0 + 48283576 C e canFam3.chr4 37129146 1162 + 88276631 I e proCoq1.NW_012152163v1 694718 192 - 940639 I e dasNov3.JH562710 212300 5 - 960158 I a score=43862.000000 s hg38.chr5_KI270795v1_alt 9570 5 + 131892 gccaT s panTro5.chr5 5258191 5 - 181907262 gccaT i panTro5.chr5 C 0 C 0 s panPan2.chr5 5520578 5 - 183735486 gccaT i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1618149 5 + 3967317 gccaT i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4469817 5 + 163208435 gccaT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5703228 5 - 180051392 gccaT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5895022 5 - 181584905 gccaT i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 924092 5 - 16193990 gccaT i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1741103 5 - 21434487 gccaT i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4709993 5 - 82825804 gccaT i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 205250 5 + 2521317 gccaT i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1696463 5 - 2415367 GCCAT i colAng1.NW_012115755v1 I 311 C 0 s saiBol1.JH378186 2165592 5 + 10068113 gccaT i saiBol1.JH378186 C 0 C 0 s aotNan1.NW_018501968v1 1102676 5 - 2246441 gccaT i aotNan1.NW_018501968v1 C 0 C 0 e mm10.chr13 65950557 2082 - 120421639 I e calJac3.chr2 142765679 1423 - 204313951 I e otoGar3.GL873522 1193771 0 + 48283576 C e canFam3.chr4 37129146 1162 + 88276631 I e proCoq1.NW_012152163v1 694718 192 - 940639 I e dasNov3.JH562710 212300 5 - 960158 I a score=48152.000000 s hg38.chr5_KI270795v1_alt 9575 5 + 131892 TACCT s panTro5.chr5 5258196 5 - 181907262 TACCT i panTro5.chr5 C 0 C 0 s panPan2.chr5 5520583 5 - 183735486 TACCT i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1618154 5 + 3967317 TACCT i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4469822 5 + 163208435 TACCT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5703233 5 - 180051392 TACCT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5895027 5 - 181584905 TACCT i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 924097 5 - 16193990 TACCT i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1741108 5 - 21434487 TACCT i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4709998 5 - 82825804 TACCT i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 205255 5 + 2521317 TACCT i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1696468 5 - 2415367 TACCT i colAng1.NW_012115755v1 C 0 C 0 s saiBol1.JH378186 2165597 5 + 10068113 TACat i saiBol1.JH378186 C 0 C 0 s aotNan1.NW_018501968v1 1102681 5 - 2246441 TACTT i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1193771 5 + 48283576 TATCT i otoGar3.GL873522 C 0 C 0 s canFam3.chr4 37130308 5 + 88276631 TACTT i canFam3.chr4 I 1162 C 0 e mm10.chr13 65950557 2082 - 120421639 I e calJac3.chr2 142765679 1423 - 204313951 I e proCoq1.NW_012152163v1 694718 192 - 940639 I e dasNov3.JH562710 212300 5 - 960158 I a score=119584.000000 s hg38.chr5_KI270795v1_alt 9580 11 + 131892 TTTAAAAACAA s panTro5.chr5 5258201 11 - 181907262 TTTAAAAACAA i panTro5.chr5 C 0 C 0 s panPan2.chr5 5520588 11 - 183735486 TTTAAAAACAA i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1618159 11 + 3967317 TTTAAAAACAA i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4469827 11 + 163208435 TTTAAAAACAA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5703238 11 - 180051392 TTTAAAAAGAA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5895032 11 - 181584905 TTTAAAAACAA i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 924102 11 - 16193990 TTTAAAAACAA i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1741113 11 - 21434487 TTTAAAAACAA i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4710003 11 - 82825804 TTTAAAAACAA i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 205260 11 + 2521317 TTTAAAAACAA i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1696473 11 - 2415367 TTTAAAAACAA i colAng1.NW_012115755v1 C 0 C 0 s saiBol1.JH378186 2165602 11 + 10068113 tttaaaaacaa i saiBol1.JH378186 C 0 C 0 s aotNan1.NW_018501968v1 1102686 11 - 2246441 TTTAAAAACAA i aotNan1.NW_018501968v1 C 0 I 1 s otoGar3.GL873522 1193776 11 + 48283576 TTTAAAAACAA i otoGar3.GL873522 C 0 C 0 s canFam3.chr4 37130313 11 + 88276631 TTAAAAATCGG i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 212305 11 - 960158 TTTTAAAACAA i dasNov3.JH562710 I 5 C 0 e mm10.chr13 65950557 2082 - 120421639 I e calJac3.chr2 142765679 1423 - 204313951 I e proCoq1.NW_012152163v1 694718 192 - 940639 I a score=1334169.000000 s hg38.chr5_KI270795v1_alt 9591 174 + 131892 AAAATCCATTTTTATTTAA----AAAAAAAAACAAAA--CCTCCAGACCCCTTCTTAACACCTCTTCCCTCACTCCAC---ACCCGCTAGCCCTTTTCATGGGACAAGCTCACCAGCTGGTCCTTCTCCAGCAAAAAGACCAG------------------------AGCTTTCTGCTCTTAAGGGAGGGGACTAGGGA-TTAGGGA----A s panTro5.chr5 5258212 175 - 181907262 AAAATCCATTTTTATTTaa----aaaaaaaaaaaaaaa-CCTCCAGACCCCTTCTTAACACCTCTTCCCTCACTCCAC---ACCCGCTAGCCCTTTTCATGGGACAAGCTCACCAGCTGGTCCTTCTCCAGCAAAAAGCCCAG------------------------GGCTTTCTGCTCTTAAGGGAGGGGACTAGGGA-TTAGGGA----A i panTro5.chr5 C 0 C 0 s panPan2.chr5 5520599 172 - 183735486 AAAATCCATTTTTATTTAA----AAAAAAAAAAAA----CCTCCAGACCCCTTCTTAACACCTCTTCCCTCACTCCAC---ACCCGCTAGCCCTTTTCATGGGACAAGCTCACCAGCTGGTCCTTCTCCAGCAAAAAGCCCAG------------------------GGCTTTCTGCTCTTAAGGGAGGGGACTAGGGA-TTAGGGA----A i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1618170 172 + 3967317 AAAATCCATTTTTATTAAA----AAAAAAAAAAAAA---CCTCCAGACCCCTTCTTAACACCTCTTCCCTCACTCCAC---ACCCGCTAGCCCTTTTCATGGGACAAGCTCACCAGCTGGTCCTTCTCCAGCAAAAA-CCCAG------------------------GGCTTTCTGCTCTTAAGGGAGGGGAGTAAGGA-TTAGGGA----A i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4469838 172 + 163208435 AAAATTCATTTTTATTTAA----AAAAAAAAAAAC----CCTCCAGACCCCTTCTTAACACCTCTTCCCTCACTTCAC---ACCCGCTAGCCCTTTTCATGGGACAAGCTCACCAACTGGTCCTTCTCCAGCAAAAAGCTCAG------------------------GGCTTTCTGCTCTTAAGGGAGGGGACTAGGGA-TTAGGGA----A i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5703249 201 - 180051392 AAAATTCATTTTTATTaaaaaacaaacaaacaaaaaacCCTTCCTGACCCCTTCTTAACACCTCTTCCCTCACTCCAC---ACCCGCTAGCCCTTTTCACGGGACAAGCTCACCAGCTAGTCCTTCTCCAGTAAAAAGCCCAGTAAAAAGTCTTTCTCCAGTAAAAAAGCTTT---CTCTTAAGGGAGGAGACTAGGGG-TTAGGGA----A i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5895043 201 - 181584905 AAAATTCATTTTTATTaaaaaacaaacaaacaaaaaacTCTTTCAGACCCCTTCTTAACACCTCTTCCCTCACTCCAC---ACCCGCTAGCCCTTTTCACGGGACAAGCTCACCAGCTAGTCCTTCTCCAGTAAAAAGCCCAGTAAAAAGTCTTTCTCCAGTAAAAAAGCTTT---CTCTTAAGGGAGGAGACTAGGGG-TTAGGGA----A i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 924113 201 - 16193990 AAAATTCATTTTTATTaaaaaacaaacaaacaaaaaacCCTTCCAGACCCCTTCTTAACACCTCTTCCCTCACTCCAC---ACCCGCTAGCCCTTTTCACGGGACAAGCTCACCAGCTAGTCCTTCTCCAGTAAAAAGCCCAGTAAAAAGTCTTTCTCCAGTAAAAAAGCTTT---CTCTTAAGGGAGGAGACTAGGGG-TTAGGGA----A i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1741124 173 - 21434487 AAAATTCATTTTTATTAAA----AAACAAACAAAAAACCCTTCCAGACCCCTTCTTAACACCTCTTCCCTCACTCCAC---ACCCGCTAGCCCTTTTCACGGGACAAGCTCACCAGCTGGTCCTTCTCCAGTAAAAAGCCCAG------------------------GGCTTT---CTCTTAAGGGAGGAGACTAGGGA-TTAGGAA----A i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4710014 177 - 82825804 AAAATTCATTTTTATTaaaaaacaaacaaacaaaaaacCCTTCCAGACCCCTTCTTAACACCTCTTCCTTCACTCCAC---ACGCGCTAGCCCTTTTCACGGGACAAGCTCACCAGCTGGTCCTTCTCCAGTAAAAAGCCCAG------------------------GGCTTT---CTCTTAAGGGAGGAGACTAGGGG-TTAGGGA----A i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 205271 173 + 2521317 AAAATTCATTTTTATTAAA----AAACAAACAAAAAACCCTTCCAGACCCCTTCTTAACACCTCTTCCCTCACTCCAC---ACCCGCTAGCCCTTTTCACGGGACAAGCTCACCAGCTGGTCCTTCTCCAGTAAAAAGCCCAG------------------------GGCTTT---CTCTTAAGGGAGGAGACTAGGGA-TTAGGGA----A i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1696484 173 - 2415367 AAAATTCATTTTTATTAAA----AAACAAACAAAAAACCCTTCCAGACCCCTTCTTAACACCTCTTCCCTCACTCCAC---ACCCGCTAGCCCTTTTCACGGGACAAGCTCACCAGCTGGTCCTTCTCCAGTAAAAAGCCCAG------------------------GGCTTT---CTCTTAAGGGAGGAGACTAGGAG-TTAGGGA----A i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142767102 153 - 204313951 AAAAATCATTTTTATT----------AAAAAAAAT------TCCAG-------------ACTTCTTCCCTCACCCCAC--AACCCCCTAGCCCTTTTCATGAGATAAGCTCACCGGCTGGTCCTTCTCTAGCAAAAAGCCCAG------------------------GGCTTTCTGCTCTTGAGGGAGAGGAATAGGGGTTTGGGGA----A i calJac3.chr2 I 1423 C 0 s saiBol1.JH378186 2165613 155 + 10068113 aaaaatcatttttatt--------aaaaaaaaaaa------tCCAG-------------ACTTCTTCCCTCACCCCAC--AACCCCCTAGTCCTTTTCGTGAGATAAGCTCACCAGCTGGTCCTTCTGTAGCAACAAGCCCAG------------------------GGCTTTCTGCTCTTGAGGGAGAGGAATAGCGGTTTGGGGA----A i saiBol1.JH378186 C 0 C 0 s aotNan1.NW_018501968v1 1102698 158 - 2246441 AAAAATCATTTTTATTAAA----AAAAAAAAAAAT------TCCAG-------------ACTTCTTCCCTCACCCCAC--AACCCCCTAGCCCTTTTCATGAGATAAGCTC-CCAGCTGGTCCTTCTCTAGCAAAAAGCCCAG------------------------GGCTTTCTGCTCTTGAGGGAGAGGAATAGGGGTTTGGGGA----A i aotNan1.NW_018501968v1 I 1 C 0 s otoGar3.GL873522 1193787 154 + 48283576 ATAATTTGTTTTTATTAAA----GAAA------------TCTCCAGACCTCACCTCTACACCCC--ACCTACCTCTAG-------CCTAGCCTTTTTCGTAGAACAAGCCCAC--GGTGGTCCACACCCAGCTAGAAG-TCAG------------------------GACGTTGAGCTTT---AGGAACAAGCTAAGGA---AGGGAGCGGG i otoGar3.GL873522 C 0 C 0 s canFam3.chr4 37130324 154 + 88276631 AGAATT--TGTTTATTTAA----AGACATA-----------CCCAGGCCCCTTCCCA--ACCCCTTCCCTCCCTGCTCTGGACCCCTAAAAACCTCT---------AGTTTACCAGCTGGTCCTTCTCCAGCCAG-AGTCGGA------------------------GGCCTTCTGCTCTTAAGGGAGGGGATTGAGGG-GTGGAGA----A i canFam3.chr4 C 0 I 256 s dasNov3.JH562710 212316 148 - 960158 AGGAT---------TTTGA----AAAAACACCCAACAACCCCCCAGGTCCCTCCTCAACACTTCTCCCCTCCCCCCAC--AAACCTCTAGCCCTTTCCAGAAACAAATCTCGCTAGCT---------CCAGCCGAAAGACTGA------------------------GACTTC-TGGTCTAATGGAAGG-----------ATGGGGa----a i dasNov3.JH562710 C 0 C 0 e mm10.chr13 65950557 2082 - 120421639 I e proCoq1.NW_012152163v1 694718 192 - 940639 I a score=479966.000000 s hg38.chr5_KI270795v1_alt 9765 47 + 131892 CAACCCCAGAAGAAAGGT--------GATGAGTTAACT---GTTTAGAAGGTTAGTGT s panTro5.chr5 5258387 47 - 181907262 CAACCCCAGAAGAAAGGT--------GATGAGTTAACT---GTTTAGAAGGTTAGTGT i panTro5.chr5 C 0 C 0 s panPan2.chr5 5520771 47 - 183735486 CAACCCCAGAAGAAAGGT--------GATGAGTTAACT---GTTTAGAAGGTTAGTGT i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1618342 47 + 3967317 CAACCCCAGAAGAAAGGT--------GATGAGTTAACT---GTTTAGAAGGTTAGTGT i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4470010 47 + 163208435 CAACCCCACAAGAAAGGT--------GATGAGTTAACT---GTTTAGAAGGTTAGTGT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5703450 47 - 180051392 CAACTCCAGAAGAAAGGT--------GATGGGTGAACT---GTTTAGAAGGTTAGTGT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5895244 47 - 181584905 CAACTCCAGAAGAAAGGT--------GATGGGTGAACT---GTTTAGAAGGTTAGTGT i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 924314 47 - 16193990 CAACTCCAGAAGAAAGGT--------GATGGGTGAACT---GTTTAGAAGGTTAGTGT i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1741297 47 - 21434487 CAACTCCAGAAGAAAGGT--------GATGGATGAACT---GTTTAGAAGGTTAGTGT i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4710191 47 - 82825804 CAACTCCAGAAGAAAGGC--------GATGGGTGAACT---GTTTAGAAGGTTAGTGT i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 205444 47 + 2521317 CAACTCCAGAAGAAAGGT--------GATGGGTGAACT---GTTTAGAAGGTTAGTGT i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1696657 47 - 2415367 CAACTCCGGAAGAAAGGT--------GATGGGTGAACT---GTTTAGAAGGTTAGTGT i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142767255 47 - 204313951 CAACCCCAGAAGAAAGGT--------GATGGGTTAAGT---GTTTAGAAGGTTAGTGT i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2165768 47 + 10068113 CAACCCCAGAAGAAAGGT--------GATGGGTTAACT---GTTTAGAAAGTTAGTGT i saiBol1.JH378186 C 0 C 0 s aotNan1.NW_018501968v1 1102856 47 - 2246441 CAACCCCAGAAGAAAGGT--------GATGGGTTAACT---GTTTAGAAGGTTAGTGT i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1193941 55 + 48283576 CAACCTTACAAAAAAGGTATTTTAGAGATACGTAAGCT---GATGAGAAGATTAGCAT i otoGar3.GL873522 C 0 C 0 s dasNov3.JH562710 212464 58 - 960158 caaccccagaagaaaggtattttatttgtggggaaactgaggcttagaggggtAGCAC i dasNov3.JH562710 C 0 C 0 e mm10.chr13 65950557 2082 - 120421639 I e canFam3.chr4 37130478 256 + 88276631 I e proCoq1.NW_012152163v1 694718 192 - 940639 I a score=1041696.000000 s hg38.chr5_KI270795v1_alt 9812 100 + 131892 TGGTTCTTTTATTCGATTAAACAGGAATACACATATA---TCTACCAAAGAATAGGTAAGGGAGA-AATAAGAACACT-------------AAAAAAACTCGGAATCGTTAAGTGTG s panTro5.chr5 5258434 100 - 181907262 TGGTTCTTTTATTCGATTAAACAGGAATACACATATA---TCTACCAAAGAATAGGTAAGGGAGA-AATAAGAACACT-------------AAAAAAACTCGGAATCGTTAAGTGTG i panTro5.chr5 C 0 C 0 s panPan2.chr5 5520818 100 - 183735486 TGGTTCTTTTATTCGATTAAACAGGAATACACATATA---TCTACCAAAGAATAGGTAAGGGAGA-AATAAGAACACT-------------AAAAAAACTCGGAATCGTTAAGTGTG i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1618389 100 + 3967317 CGGTTCTTTTATTCGATTAAACAGGAATACACATATA---TCTACCAAAGAATAGGTAAGGGAGA-AATAAGAACACT-------------AAAAAAACTCGGAATCGTTAAGTGTG i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4470057 100 + 163208435 TGGTTCTTTTATTCGATTAAACAGGGATACACATATA---TCTACCAAGGAATAGGTAAGGGAGA-AATAAGAACACT-------------AAAAAAACTCGGAATCGTTAAGTGTG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5703497 100 - 180051392 TGGTTCTTTTATTTGATTAAACAGGGATACACATATA---TCTACCAAGTAATAAGTAAGGGAGA-AATAAGAACACT-------------AAAAAAACTCGGAATCGTTAAGTGTG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5895291 100 - 181584905 TGGTTCTTTTATTTGATTAAACAGGGATACACATATA---TCTACCAAGTAATAGGTAAGGGAGA-AATAAGAACACT-------------AAAAAAACTCGGAATCGTTAAGTGTG i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 924361 100 - 16193990 TGGTTCTTTTATTTGATTAAACAGGTATACACATATA---TCTACCAAGTAATAGGTAAGGGAGA-AATAAGAACACT-------------AAAAAAACTCGGAATCGTTAAGTGTG i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1741344 100 - 21434487 TGGTTCTTTTATTCGATTAAACAGGGATACACATATA---TCTACCAAGGAATAGGTAAGGGAGA-AATAAAAACACT-------------AAAAAAACTCGGAATCGTTAAGTGTG i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4710238 100 - 82825804 TGGTTCTTTTATTCGATTAAACAGGGATACATATATA---TCTACCAAGGAATAGGTAAGGGAGA-AATAAAAACACT-------------AAAAAAACTCGGAATCGTTAAGTGTG i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 205491 101 + 2521317 TGGTTCTTTTATTCGATTAAACAGGGATACACATATA---TCTACCAAGGAATAGGTAAGGGAGA-AATAAAAACACT------------AAAAAAAACTCGGAATCGTTAAGTGTG i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1696704 99 - 2415367 TGGTTCTTTTATTCGATTAAACAGGGATACACATATA---TCTACCAAGGAATAGGTAAGGGAGA-AATAAGAACACT--------------AAAAAACTCGGAATCGTTAAGTGTG i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142767302 116 - 204313951 TGGTTCTTTTATTCGATTAAACAGGGACACAAATATACTCCCCACCAAGGAGTAGATAAGGGAGA-AATAAGGACACTaaaaaaaaaaaaaaaaaaaaaTTGGAATCGTTAAGTGTG i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2165815 100 + 10068113 TGGTTCTTTGATTCGATTAAACAGGGATACAAATATA---TCTACCAAGGAGTAGATGAGGGAGA-AATAAGGACACT-------------AAAAGAAATTGGAATCGTTAAGTGTG i saiBol1.JH378186 C 0 C 0 s aotNan1.NW_018501968v1 1102903 101 - 2246441 TGGTTCTTTTATTCGATTAAACAGGGATACAAATATA---TCTACCAAGGAGTAGATAAGGGAGA-AATAAGGACACT------------TAAAAAAAATTGGAATCGTTAAATGTG i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1193996 93 + 48283576 TGGTTCCTTTACTC----AAACAGAGATAGA-ATATA---TATACCAAGGAGCAGGTAGGGGAGG-AATAAGGACACT-------------AAAATA--CAGTCATCTTTAAGAGTA i otoGar3.GL873522 C 0 C 0 s canFam3.chr4 37130734 97 + 88276631 TGGCTTTCTTTTTCAATTAAACAGGGATACAAATATA---TCTACCAGGCAGTAGATAAGGGGGA-AATAGG--CCCT--------------CAAAAGCTCAGAATCACTATGATGG i canFam3.chr4 I 256 C 0 s dasNov3.JH562710 212522 84 - 960158 TGGTTCCCTTCCTCG-----------ATACAAATATA---CTTACCAAGGAGTAAGTAAGGGAGGCAATAACGTCCCT--------------AAAAACCTCGGAA-----AATTGTA i dasNov3.JH562710 C 0 C 0 e mm10.chr13 65950557 2082 - 120421639 I e proCoq1.NW_012152163v1 694718 192 - 940639 I a score=75533.000000 s hg38.chr5_KI270795v1_alt 9912 20 + 131892 ----AAGCATA---TTTGGAGTT--AA------AA s panTro5.chr5 5258534 20 - 181907262 ----AAGCATA---TTTGGAGTT--AA------AA i panTro5.chr5 C 0 C 0 s panPan2.chr5 5520918 20 - 183735486 ----AAGCATA---TTTGGAGTT--AA------AA i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1618489 20 + 3967317 ----AAGCATA---TTTGGAGTT--AA------AA i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4470157 20 + 163208435 ----AAGCATA---TTTGGAGTT--AA------AA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5703597 18 - 180051392 ----AAGTATA---TTTGGAGTT--AA-------- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5895391 18 - 181584905 ----AAGCATA---TTTGGAGTT--AA-------- i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 924461 18 - 16193990 ----AAGCATA---TTTGGAGTT--AA-------- i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1741444 20 - 21434487 ----AAGCATA---TTTGGAGTT--AACA------ i cerAty1.NW_012007035v1 C 0 I 18 s chlSab2.chr23 4710338 20 - 82825804 ----AAGCATA---TTTGGAGTT--AA--CA---- i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 205592 20 + 2521317 ----AAGCATA---TTTGGAGTT--AA--CA---- i manLeu1.NW_012103943v1 C 0 I 18 s colAng1.NW_012115755v1 1696803 20 - 2415367 ----AAGCATA---TTTGGAGTT--AA----CT-- i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142767418 18 - 204313951 ----AAGCGAA---TTTGGAGTT--AA-------- i calJac3.chr2 C 0 I 1 s saiBol1.JH378186 2165915 18 + 10068113 ----AAGCGAA---TTTGGAGTT--AA-------- i saiBol1.JH378186 C 0 I 1 s aotNan1.NW_018501968v1 1103004 18 - 2246441 ----AAGCGAA---TTTGGAGTT--AA-------- i aotNan1.NW_018501968v1 C 0 I 1 s otoGar3.GL873522 1194089 23 + 48283576 ----AAGTGAAATTCTTAGGGTTTGAA-------- i otoGar3.GL873522 C 0 C 0 s mm10.chr13 65952639 16 - 120421639 ----aaGCGAA---TTTAAGG----AA-------- i mm10.chr13 I 2082 C 0 s canFam3.chr4 37130831 8 + 88276631 -----------------AAACTT--AA-------- i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 212606 12 - 960158 AAGCAAGCAGA---C-------------------- i dasNov3.JH562710 C 0 C 0 e proCoq1.NW_012152163v1 694718 192 - 940639 I a score=-14711.000000 s hg38.chr5_KI270795v1_alt 9932 9 + 131892 G-------------AACCAAAT s panTro5.chr5 5258554 9 - 181907262 G-------------AAGCAAAT i panTro5.chr5 C 0 C 0 s panPan2.chr5 5520938 9 - 183735486 G-------------AAGCAAAT i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1618509 9 + 3967317 G-------------AACCAAAT i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4470177 9 + 163208435 G-------------AAACAAAT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5703615 8 - 180051392 --------------CTCCAAAT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5895409 8 - 181584905 --------------CTCCAAAT i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 924479 8 - 16193990 --------------CTCCAAAT i macNem1.NW_012018466v1 C 0 C 0 s chlSab2.chr23 4710358 21 - 82825804 -TATATGGAGTTAACTCCAAAT i chlSab2.chr23 C 0 C 0 s colAng1.NW_012115755v1 1696823 6 - 2415367 ----------------CCAAAT i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142767437 9 - 204313951 -------------GAGCCGAAC i calJac3.chr2 I 1 C 0 s saiBol1.JH378186 2165934 9 + 10068113 -------------GAGCCACAC i saiBol1.JH378186 I 1 C 0 s aotNan1.NW_018501968v1 1103023 9 - 2246441 -------------GAGCCAAAC i aotNan1.NW_018501968v1 I 1 C 0 s otoGar3.GL873522 1194112 9 + 48283576 -------------AGGTCAAAG i otoGar3.GL873522 C 0 C 0 s mm10.chr13 65952655 9 - 120421639 -------------GAATCAGTC i mm10.chr13 C 0 I 2 s canFam3.chr4 37130839 8 + 88276631 --------------ATCCTAAT i canFam3.chr4 C 0 I 1 s dasNov3.JH562710 212618 9 - 960158 -------------GGAACAGTC i dasNov3.JH562710 C 0 C 0 e cerAty1.NW_012007035v1 1741464 18 - 21434487 I e proCoq1.NW_012152163v1 694718 192 - 940639 I e manLeu1.NW_012103943v1 205612 18 + 2521317 I a score=131160.000000 s hg38.chr5_KI270795v1_alt 9941 25 + 131892 ATTACTAAGT----AAGCAGACGCGGGCA s panTro5.chr5 5258563 25 - 181907262 ATTACTAAGT----AAGCAGACGCGGGCA i panTro5.chr5 C 0 C 0 s panPan2.chr5 5520947 25 - 183735486 ATTACTAAGT----AAGCAGACGCGGGCA i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1618518 25 + 3967317 ATTACTAAGT----AAGCAGACGCGGGCA i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4470186 25 + 163208435 ATTACTAAGT----AAGCAGAGGCGGGCA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5703623 22 - 180051392 ATTACTA-------AGAAAGAGGCGGGCA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5895417 22 - 181584905 ATTACTA-------AGAAAGAGGCGGGCA i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 924487 22 - 16193990 ATTACTA-------AGAAAGAGGCGGGCA i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1741482 24 - 21434487 ATTACTAC-T----AAGAAGAGGCAGGCA i cerAty1.NW_012007035v1 I 18 C 0 s chlSab2.chr23 4710379 21 - 82825804 ---ATTAC-T----AAGAAGAGGCGGGCA i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 205630 24 + 2521317 ATTACTAC-T----AAGAAGAGGCAGGCA i manLeu1.NW_012103943v1 I 18 C 0 s colAng1.NW_012115755v1 1696829 25 - 2415367 ATTACTAAGT----AAGAAGAGGCGGGCA i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142767446 25 - 204313951 ATTACTAAAT----AAGCAGAGGCGAACA i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2165943 25 + 10068113 GTTACTAAAC----AAGCGGAGGCGAGCA i saiBol1.JH378186 C 0 C 0 s aotNan1.NW_018501968v1 1103032 25 - 2246441 ATTACGAAAT----AAGCAGAGGCGAGCA i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1194121 5 + 48283576 ------------------------GCGCA i otoGar3.GL873522 C 0 I 2 s mm10.chr13 65952666 23 - 120421639 ATTTCAAA------AGGGAAAGGTGGACG i mm10.chr13 I 2 C 0 s canFam3.chr4 37130848 22 + 88276631 ATTACTATTT----GAAAAGGGGTAG--- i canFam3.chr4 I 1 C 0 s dasNov3.JH562710 212627 29 - 960158 GTCACTATTTCAAAAACCAAAGGCGCGTG i dasNov3.JH562710 C 0 C 0 e proCoq1.NW_012152163v1 694718 192 - 940639 I a score=568203.000000 s hg38.chr5_KI270795v1_alt 9966 40 + 131892 CGCGCTGCATACCGGGATTTGTAGTCCCTTCCGGGGCGGG s panTro5.chr5 5258588 40 - 181907262 CGCGCTGCATACCGGGATTTGTAGTCCCTTCCGGGGCGGG i panTro5.chr5 C 0 C 0 s panPan2.chr5 5520972 40 - 183735486 CGCGCTGCATACCGGGATTTGTAGTCCCTTCCGGGGCGGG i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1618543 40 + 3967317 CGCGCTGCATACCGGGATTTGTAGTCCCTTCCGGGGCGGG i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4470211 40 + 163208435 CGCGCTGCATACCGGGATTTGTAGTCCCTTCCGGGGCTGG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5703645 40 - 180051392 CGCGCTGCATACCGGGATTTGTAGTCCCTTCCGGGGCGGG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5895439 40 - 181584905 CGCGCTGCATACCGGGATTTGTAGTCCCTTCCGGGGCGGG i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 924509 40 - 16193990 CGCGCTGCATACCGGGATTTGTAGTCCCTTCCGGGGCGGG i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1741506 40 - 21434487 CGCGCTGCATACCGGGATTTGTAGTCCTTTCCGGGGCGGG i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4710400 40 - 82825804 CGCGCTGCATACCGGGATTTGTAGTCCCTTCCGGGGCGGG i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 205654 40 + 2521317 CGCGCTGCATACCGGGATTTGTAGTCCTTTCCGGGGCGGG i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1696854 40 - 2415367 CGCACTGCATACCGGGATTTGTAGTCCCTTCCGGGGCGGG i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142767471 39 - 204313951 CGCGCTGCATACCGGGATTTGTAGTCCC-TCCAGGGCCGG i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2165968 39 + 10068113 CGCGCTGCATACCGGGATTTGTAGTTCC-TCCAGGGCGGG i saiBol1.JH378186 C 0 C 0 s aotNan1.NW_018501968v1 1103057 39 - 2246441 CGCGCTGCATACCGGGATGTGTAGTCCT-TCCAGGGTGGG i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 694910 40 - 940639 CGCGCTGCATGCCGGGATTTGCAGTCCCTTCCGGGGCGGG i proCoq1.NW_012152163v1 I 192 I 37 s otoGar3.GL873522 1194128 39 + 48283576 CGCACTACCCGCCGGGATTTGCAGTCTCTTCC-GGGCGAG i otoGar3.GL873522 I 2 C 0 s mm10.chr13 65952689 33 - 120421639 CGCGCTGCATGGCGGGATTTGTAGTTCC-------GCGAG i mm10.chr13 C 0 C 0 s canFam3.chr4 37130870 40 + 88276631 CGCGCTGCATGCCGGGATTTGTAGTCCCCTCCCGGATGGC i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 212656 40 - 960158 CGCGCTGCCTGTCGGGCTTTGCAGTCCTTTAAGGAACGGG i dasNov3.JH562710 C 0 C 0 a score=354055.000000 s hg38.chr5_KI270795v1_alt 10006 39 + 131892 GTACAGCGCGCCTGCGCAGA-GGGGC-CGTCCCTCTTCCGG s panTro5.chr5 5258628 39 - 181907262 GTACAGCGCGCCTGCGCAGA-GGGGC-CGTCGCTCTTCCGG i panTro5.chr5 C 0 C 0 s panPan2.chr5 5521012 40 - 183735486 GTACAGCGCGCCTGCGCAGAGGGGGC-CGTCGCTCTTCCGG i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1618583 38 + 3967317 GTACAGCGCGCCTGTGCAGA--GGGC-CGTCGCTCTTCCGG i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4470251 39 + 163208435 GTACAGCGCGCCTGCGTAGA-GGGGC-CGTCGCTCTTCCCG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5703685 39 - 180051392 GTACAGCGCGCCTGCGTAGA-GAAGC-CGTCGCTCTTCCGG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5895479 39 - 181584905 GTACAGCGCGCCTGCGTAGA-GAAGC-CGTCGCTCTTCCGG i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 924549 39 - 16193990 GTACAGCGCGCCTGCGTAGA-GAAGC-CGTCGCTCTTCCGG i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1741546 39 - 21434487 GTACAGCGCGCCTGCGTAGA-GGAGC-CGTCGCTCTTCTGG i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4710440 39 - 82825804 GTACAGCGCGCCTGCGTAGA-GGAGC-CGTCGCTCTTCCGG i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 205694 39 + 2521317 GTACAGCGCGCCTGCGTAGA-GGAGC-CGTCGCTCTTCTGG i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1696894 39 - 2415367 GTACAGCGCGCCTGCGTAGA-GGAGC-CGTCGCTCTTCCTG i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142767510 39 - 204313951 CTACAGCGCGCCTGCTCAGA-GGCTC-CGTCGCTTTTCCGG i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2166007 39 + 10068113 CCACAGCGCGCCTGCGCGGA-GGCTC-CGTCGCTCTTCCGG i saiBol1.JH378186 C 0 C 0 s aotNan1.NW_018501968v1 1103096 39 - 2246441 CTATAGCGCGCCTGCGCAGA-GGCTC-CGTCGCTTCTCCGG i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1194167 38 + 48283576 CCACTGTGCGGCCGCAGAG--GGAGC-GGCGGCTCGTTCGA i otoGar3.GL873522 C 0 C 0 s mm10.chr13 65952722 39 - 120421639 -TGAGAGGCGCCAGCGCGGA-GCGACGCGGCGCTTTTTCGG i mm10.chr13 C 0 C 0 s canFam3.chr4 37130910 32 + 88276631 CCGCACTGCGGCTGTGCAGG-GGCGT--------TCTCCAG i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 212696 37 - 960158 CCACAATGCGGCTGCGCCGA-GTCGC---ACTCCCATCGGG i dasNov3.JH562710 C 0 C 0 e proCoq1.NW_012152163v1 694950 37 - 940639 I a score=519456.000000 s hg38.chr5_KI270795v1_alt 10045 36 + 131892 GCGCATGCGTGCGGCAGCGGCGCCAGGACTGACTGC s panTro5.chr5 5258667 36 - 181907262 GCGCATGCGTGCGGCAGCGGCGCCAGGACTGACTGC i panTro5.chr5 C 0 C 0 s panPan2.chr5 5521052 36 - 183735486 GCGCATGCGTGCGGCAGCGGCGCCAGGACTGACTGC i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1618621 36 + 3967317 GCGCATGCGTGCGGCAGCGGCGCCGGGACTGACTGC i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4470290 36 + 163208435 GCGCATGCGTGCGGCAGCGGCGCCAGGACTGATTGC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5703724 36 - 180051392 GCGCATGCGTGCGGCAGCGGCGCCAGGACTGATTGC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5895518 36 - 181584905 GCGCATGCGTGCGGCAGCGGCGCCAGGACTGACTGC i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 924588 36 - 16193990 GCGCATGCGTGCGGCAGCGGCGCCAGGACTGATTGC i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1741585 36 - 21434487 GCGCATGCGTGCGGCCGCGGCGCCAGGACTGATTGC i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4710479 36 - 82825804 GCGCATGCGTGCGGCAGCGGCGCCAGGACTGATTGC i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 205733 36 + 2521317 GCGCATGCGTGCGGCCGCGGCGCCAGGACTGATTGC i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1696933 36 - 2415367 GCGCATGCGTGCGGCAGCGGCGCCAGGACTGATTGC i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142767549 36 - 204313951 GCGCATGCGTGCGGCAGCGGCGCCAGGACTGATTGC i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2166046 36 + 10068113 GCGCGTGCGTGCAGCAGCGGCGCCAGGACTGATTGC i saiBol1.JH378186 C 0 C 0 s aotNan1.NW_018501968v1 1103135 36 - 2246441 GCGCATGCGTGCAGCAGCGGCGCCAGGACTGATTGC i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 694987 36 - 940639 GCGCACGCGTGTGGCGGCGGCGCCAGGCCTGACTGC i proCoq1.NW_012152163v1 I 37 I 37 s otoGar3.GL873522 1194205 36 + 48283576 GCGCATGCGTTTGGCGGCGGCGCCAGGCCTGACGGT i otoGar3.GL873522 C 0 C 0 s mm10.chr13 65952761 34 - 120421639 -CGCATGTGCAGGGCGACGGCGCCA-GACTCAGAGT i mm10.chr13 C 0 C 0 s canFam3.chr4 37130942 36 + 88276631 GCGCATGCGTGCAGCGGCGGCGGCAGGCCTGACTGC i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 212733 24 - 960158 GCGCATGCGCGCGGCGGCGGCGTC------------ i dasNov3.JH562710 C 0 C 0 a score=129990.000000 s hg38.chr5_KI270795v1_alt 10081 38 + 131892 GCCGTGGAGGCTGCTGCAGTGT-----TGTGAGTTGGAAGCTG s panTro5.chr5 5258703 37 - 181907262 ACCGTGGAGGCTGCTGCAGTGT-----TGTGAGTTGGAAGCT- i panTro5.chr5 C 0 C 0 s panPan2.chr5 5521088 37 - 183735486 ACCGTGGAGGCTGCTGCAGTGT-----TGTGAGTTGGAAGCT- i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1618657 37 + 3967317 ACCGTGGAGGCTGCTGCAGTGT-----TGTGAGTTGGAAGCT- i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4470326 37 + 163208435 ACCCTCGAGGCTGCTGCCGTAT-----TGTGAGCTGGAAGCT- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5703760 30 - 180051392 ACCCTGGCGGCTGCTGGCGTGT-----TGTG-------AGCT- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5895554 30 - 181584905 ACCCTGGCGGCTGCTGGCGTGT-----TGTG-------AGCT- i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 924624 30 - 16193990 ACCCTGGCGGCTGCTGGCGTGT-----TGTG-------AGCT- i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1741621 30 - 21434487 ACCCTGGCGGCTGCTTGCGTGT-----TGTG-------AGCT- i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4710515 30 - 82825804 ACCCTTGCGGCTGCTGGCGTGT-----TGTG-------AGCT- i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 205769 30 + 2521317 ACCCTGGCGGCTGCTTGCGTGT-----TGTG-------AGCT- i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1696969 30 - 2415367 ACCCTGGCGGCTGCTGGCGTGT-----TGTG-------AGCT- i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142767585 30 - 204313951 ACCCCGGCGGCTGAGGCGGTGT-----TGTG-------AGCT- i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2166082 30 + 10068113 ACCCTGGCGACTGAGGCGGTGT-----TGTG-------AGCT- i saiBol1.JH378186 C 0 C 0 s aotNan1.NW_018501968v1 1103171 30 - 2246441 ACCCTCGCGGCTGACGCGGTGT-----TGTG-------AGCT- i aotNan1.NW_018501968v1 C 0 I 2 s otoGar3.GL873522 1194241 30 + 48283576 CCCTAGGTGGCCG-GGCAGCGTACGCGTCTG------------ i otoGar3.GL873522 C 0 C 0 s mm10.chr13 65952795 26 - 120421639 ATCC----AGCTTCCGGCGCGCGGTC-CGTG------------ i mm10.chr13 C 0 I 2 s canFam3.chr4 37130978 27 + 88276631 ACCAAAGCGGC---GGTAGAGA-----CGCG-------GGCT- i canFam3.chr4 C 0 I 3 s dasNov3.JH562710 212757 10 - 960158 ---CTAGTCGTCA------------------------------ i dasNov3.JH562710 C 0 C 0 e proCoq1.NW_012152163v1 695023 37 - 940639 I a score=87162.000000 s hg38.chr5_KI270795v1_alt 10119 7 + 131892 GGGAGCT s panTro5.chr5 5258740 7 - 181907262 GGGAGCT i panTro5.chr5 C 0 C 0 s panPan2.chr5 5521125 7 - 183735486 GGGAGCT i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1618694 7 + 3967317 GGGAGCT i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4470363 7 + 163208435 GGGAGCT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5703790 7 - 180051392 GGGAGCT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5895584 7 - 181584905 GGGAGCT i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 924654 7 - 16193990 GGGAGCT i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1741651 7 - 21434487 GGGAGCT i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4710545 7 - 82825804 GGGAGTT i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 205799 7 + 2521317 GGGAGCT i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1696999 7 - 2415367 GGGAGCT i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142767615 7 - 204313951 GGGAGCT i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2166112 7 + 10068113 GGGAGCT i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 22357 7 - 709587 GGGAGCT i cebCap1.NW_016107999v1 N 0 C 0 s aotNan1.NW_018501968v1 1103203 5 - 2246441 --GAGCT i aotNan1.NW_018501968v1 I 2 C 0 s otoGar3.GL873522 1194271 6 + 48283576 GGGACC- i otoGar3.GL873522 C 0 C 0 s mm10.chr13 65952823 5 - 120421639 GAGGG-- i mm10.chr13 I 2 C 0 s canFam3.chr4 37131008 7 + 88276631 GGGAGCT i canFam3.chr4 I 3 C 0 s dasNov3.JH562710 212767 7 - 960158 GGGAATT i dasNov3.JH562710 C 0 C 0 e proCoq1.NW_012152163v1 695023 37 - 940639 I a score=5746223.000000 s hg38.chr5_KI270795v1_alt 10126 319 + 131892 CGGCATGGCGGTCCCCGCTGCAGCCATGGGGCCCTCGGCGTTGGGCCAGAGCGGTCCCGGCTCGATGGCCCCGTGGTGCTCAGTGAGCAGCGGCCCGTCGCGCTACGTGCTTGGGATGCAGGAGCTGTTCCGGGGCCACAGCAAGACGCGCGAGTT-CTGGCGCACAGCGCCAAGGTGCACTCGGTGGCCTGGAGTTGCGACGGGCGTCGCCTAGCCTCGGGGTCCTTCGACAAGACGGCCAGCGTCTTCTTGCTGGAGAAGGACCGGTTGGTGAGCTGCCGGGGCTCGGCTCAGGCT--AGGGAGAGGGGCCGTGGTGAAG-- s panTro5.chr5 5258747 320 - 181907262 CGGCATGGCGGTCCCCGCTGCAGCTATGGGGCCCTCGGCGTTGGGCCAGAGCGGCCCCGGCTCGATGGCCCCGTGGTGCTCAGTGAGCAGCGGCCCGTCGCGCTACGTGCTTGGGATGCAGGAGCTGTTCCGGGGCCACAGCAAGACGCGCGAGTTCCTGGCGCACAGCGCCAAGGTGCACTCGGTGGCCTGGAGTTGCGACGGGCGTCGCCTAGCCTCGGGGTCCTTCGACAAGACGGCCAGCGTCTTCTTGCTGGAGAAGGACCGGTTGGTGAGCTGCCGGGGCTCGGCTCAGGCT--AGGGAGAGGGGCCGTGGTGAGG-- i panTro5.chr5 C 0 C 0 s panPan2.chr5 5521132 320 - 183735486 CGGCATGGCGGTCCCCGCTGCAGCCATGGGGCCCTCGGCGTTGGGCCAGAGCGGCCCCGGCTCGATGGCCCCGTGGTGCTCAGTGAGCAGCGGCCCGTCGCGCTACGTGCTTGGGATGCAGGAGCTGTTCCGGGGCCACAGCAAGACGCGCGAGTTCCTGGCGCACAGCGCCAAGGTGCACTCGGTGGCCTGGAGTTGCGACGGGCGTCGCCTAGCCTCGGGGTCCTTCGACAAGACGGCCAGCGTCTTCTTGCTGGAGAAGGACCGGTTGGTGAGCTGCCGGGGCTCGGCTCAGGCT--AGGGAGAGGGGCCGTGGTGAGG-- i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1618701 320 + 3967317 CGGCATGGCGGTCCCCGCTGCAGCCATGGGGCCCTCGGCGTTGGGCCAGAGCGGCCCCGGCTCGATGGCCCCGTGGTGCTCAGTGAGCAGCGGCCCGTCGCGCTACGTGCTTGGGATGCAGGAGCTGTTCCGGGGCCACAGCAAGACGCGCGAGTTCCTGGCGCACAGCGCCAAGGTGCACTCGGTGGCCTGGAGTTGCGACGGGCGTCGCCTAGCCTCGGGGTCCTTCGACAAGACGGCCAGCGTCTTCTTGCTGGAGAAGGACCGGTTGGTGAGCTGCCGGGGCTCGGCTCAGGCT--AGGGAGAGGGGCCGTGGTGAAG-- i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4470370 320 + 163208435 CGGCATGGCTGTCCCCGCTGCAGCCATGGGGCTCTCGGCGTTGGGCCAGAGCGGCCCCGGCTCGATGGCCCCGTGGTGCTCAGTGAGCAGCGGCCCGTCGCGCTACGTGCTTGGGATGCAGGAGCTGTTCCGGGGCCACAGCAAGACGCGCGAGTTCCTGGCGCACAGCGCCAAGGTGCACTCGGTGGCCTGGAGTTGCGACGGGCGTCGCCTAGCCTCGGGGTCCTTCGACAAGACGGCCAGCGTCTTCTTGCTGGAGAAGGACCGGTTGGTGAGCTGCCGGGGCTTGGCCCAGGCC--AGGGAGAGGGGCCGTGGTGAAG-- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5703797 320 - 180051392 CGGCATGGCGGTGCCCACTGCAGCCATGGGGCCCTCGGCGTTGGGCCAGAGCGGCCCCGGCTCGATGGCCCCGTGGTGCTCAGTGAGCAGCGGCCCGTCGCGCTACGTGCTTGGGATGCAGGAGCTGTTCCGGGGCCACAGCAAGACGCGCGAGTTCCTGGCGCACAGCGCCAAGGTGCACTCGGTGGCCTGGAGTTGCGACGGGCGTCGCCTAGCCTCGGGGTCCTTCGACAAGACGGCCAGTGTCTTCTTGCTGGAGAAGGACCGGTTGGTGAGCTGCCGGGGCTCGGCCCAGGCT--AGGGGGAGGGGTCGTGGTGAAG-- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5895591 320 - 181584905 CGGCATGGCGGTGCCCACTGCAGCCATGGGGCCCTCGGCGTTGGGCCAGAGCGGCCCCGGCTCGATGGCCCCGTGGTGCTCAGTGAGCAGCGGCCCGTCGCGCTACGTGCTTGGGATGCAGGAGCTGTTCCGGGGCCACAGCAAGACGCGCGAGTTCCTGGCGCACAGCGCCAAGGTGCACTCGGTGGCCTGGAGTTGCGACGGGCGTCGCCTAGCCTCGGGGTCCTTCGACAAGACGGCCAGTGTCTTCTTGCTGGAGAAGGACCGGTTGGTGAGCTGCCGGGGCTCGGCCCAGGCT--AGGGGGAGGGGTCGTGGTGAAG-- i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 924661 320 - 16193990 CGGCATGGCGGTGCCCACTGCAGCCATGGGGCCCTCGGCGTTGGGCCAGAGCGGCCCCGGCTCGATGGCCCCGTGGTGCTCAGTGAGCAGCGGCCCGTCGCGCTACGTGCTTGGGATGCAGGAGCTGTTCCGGGGCCACAGCAAGACGCGCGAGTTCCTGGCGCACAGCGCCAAGGTGCACTCGGTGGCCTGGAGTTGCGACGGGCGTCGCCTAGCCTCGGGGTCCTTCGACAAGACGGCCAGTGTCTTCTTGCTGGAGAAGGACCGGTTGGTGAGCTGCCGGGGCTCGGCCCAGGCT--AGGGGGAGGGGTCGTGGTGAAG-- i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1741658 320 - 21434487 CGGCATGGCGGTGCCCACTGCAGCCATGGGGCCCTCGGCGTTGGGCCAGAGTGGCCCCAGCTCGATGGCCCCGTGGTGCTCAGTGAGCAGCGGCCCGTCGCGCTACGTGCTTGGGATGCAGGAGCTGTTCCGGGGCCACAGCAAGACGCGCGAGTTCCTGGCGCACAGCGCCAAGGTGCACTCGGTGGCCTGGAGTTGCGACGGGCGTCGCCTAGCCTCGGGGTCCTTCGACAAGACGGCCAGTGTCTTCTTGCTGGAGAAGGACCGGTTGGTGAGCTGCCGGGGCTCGGCCCAGGCT--AGGGAGAGGGGTCGTGGTGAAG-- i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4710552 320 - 82825804 CGGCATGGCGGTGCCCCCTGCAGCCATGGGGCCCTCGGCATTGGGCCAGAGCGGCCCCGGCTCGATGGCCCCGTGGTGCTCAGTGAGCAGCGGCCCGTCGCGCTACGTGCTTGGGATGCAGGAGCTGTTCCGGGGCCACAGCAAGACACGCGAGTTCCTGGCTCACAGCGCCAAGGTGCACTCGGTGGCCTGGAGTTGCGACGGGCGTCGCCTAGCCTCGGGGTCCTTCGACAAGACGGCCAGTGTCTTCTTGCTGGAGAAGGACCGGTTGGTGAGCTGCCGGGGCTCGGCCCAGGCT--AGGGAGAGGGGTCGTGGTGAAG-- i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 205806 320 + 2521317 CGGCATGGCGGTGCCCACTGCAGCCATGGGGCCCTCGGCGTTGGGCCAGAGCGGCCCCAGCTCGATGGCCCCGTGGTGCTCAGTGAGCAGCGGCCCGTCGCGCTACGTGCTTGGGATGCAGGAGCTGTTCCGGGGCCACAGCAAGACGCGCGAGTTCCTGGCGCACAGCGCCAAGGTGCACTCGGTGGCCTGGAGTTGCGACGGGCGTCGCCTAGCCTCGGGGTCCTTCGACAAGACGGCCAGTGTCTTCTTGCTGGAGAAGGACCGGTTGGTGAGCTGCCGGTGCTCGGCCCAGGCT--AGGGAGAGGGGTCGTGGTGAAG-- i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1697006 320 - 2415367 CGGCATGGCGGTGCCTACTGCAGCCATGGGGCCCTCGGCGTTGGGCCAGAGCGGCCCTGGCTCAATGGTCCCGTGGTGCTCAGTGAGCAGCGGCCCGTCGCGCTACGTGCTTGGGATGCAGGAGCTGTTCCGGGGCCACAGCAAGACGCGCGAGTTCCTGGCGCACAGCGCCAAGGTGCACTCGGTGGCCTGGAGTTGCGACGGCCGTCGCCTAGCCTCGGGGTCCTTCGACAAGACGGCCAGTGTCTTCTTGCTGGAGAAGGACCGGTTGGTGAGCTGCCGGGGCTCGGCCCAGGCT--AGGGAGAGGGGTCGTGGTGAAG-- i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142767622 320 - 204313951 CAGCATGGCGGTGCCCACTGCACCCATGGGGCCCTCGGCATTGGGCCAGACCGGCCCCGGCTCGATGGCCTCGTGGTGCTCAGTGAGCAGCGGCCCGTCGCGCTACGTGCTTGGGATGCAGGAGCTGTTCCGGGGCCACAGCAAGACGCGCGAGTTCTTGGCGCATAGCGCCAAGGTGCACTCGGTGGCCTGGAGCTGCGACGGGCGTCGCCTAGCTTCGGGGTCCTTCGACAAGACGGCCAGCGTCTTCTTGCTGGAGAAGGACCGGTTGGTGAGCTGCCGGGGTTCGGCCCAGGCT--AGGTGGAGGGACTGCGATGAAG-- i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2166119 320 + 10068113 CGGCATGGCGGTGCCCACTGCACCCATGGGGCCCTCGGCATTGGGCCAGACCGGCCCCGGCTCGATGGCCCCGTGGTGCTCAGTGAGCAGCGGCCCGTCGCGCTACGTGCTTGGGATGCAGGAGCTGTTCCGGGGCCACAGCAAGACGCGCGAGTTCCTGGCGCACAGCGCCAAGGTGCACTCGGTGGCCTGGAGCTGCGACGGGCGTCGCCTAGCCTCAGGGTCCTTTGACAAGACGGCCAGCGTCTTCTTGCTGGAGAAGGACCGGTTGGTGAGCTGCCGGGGTTCGGCCCAGGCT--GGGTAGAGGGACTGCGGTGAAG-- i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 22364 320 - 709587 CGGCATGGCGGCGCCCACTGCACCCATGGGGCCCTCGGCATTGGGCCAGACCGGCCCCGGCTCGATGGCCCCGTGGTGCTCAGTGAGCAGCGGCCCGTCGCGCTACGTGCTTGGGATGCAGGAGCTGTTCCGGGGCCACAGCAAGACGCGCGAGTTCCTGGCGCACAGCGCCAAGGTGCACTCGGTGGCCTGGAGCTGCGATGGGCGTCGCCTAGCCTCGGGGTCCTTCGACAAGACGGCCAGCGTCTTCTTGCTGGAGAAGGACCGGTTGGTGAGCGGCTGGGGTTCGGCCCAGGCT--AGGTAGAGGGACTGCGGTGAAG-- i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1103208 320 - 2246441 CGGCATGGCGGTGCCCACTGCACCTATGGGGCCCTCGGCATTGGGCCAGACCGGTCCTGGCTCGATGGCCCCGTGGTGCTCAGTGAGCAGCGGCCCGTCGCGCTACGTGCTTGGGATGCAGGAGCTGTTCCGGGGCCACAGCAAGACGCGCGAGTTCCTGGCGCACAGCGCCAAGGTGCACTCGGTGGCCTGGAGCTGCGACGGGCGTCGCCTAGCCTCGGGGTCCTTCGACAAGACGGCCAGCGTCTTCTTGCTGGAGAAGGACCGGTTGGTGAGCTGCCGGGGTTCGGCCCAGGCT--AGGTAGAGGGACTGCAGTGAAG-- i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 695060 320 - 940639 CGGCATGGCGGTGCCCCCGGCGGCTATGGGGCCTTCGGCGCTGGGCCAGAGCGGTCCCGGCTCGATGGCCCCCTGGTGCTCAGTGAGCAGCGGCCCGTCGCGCTACGTGCTCGGAATGCAGGATCTGTTCCGGGGCCACAGCAAGACGCGCGAGTTCCCAGCGCACAGCGCCAAGGTGCACTCGGTGGCCTGGAGCTGCGACGGGCGTCGCTTAGCCTCGGGGTCCTTCGACAAGACGGCCAGCGTCTTCTTGCTGGAGAAAGACCGGTTGGTGAGCTGCTGGGGCCCGGCCCAGGCT--AGGGAAAGGGGCCGTGGGGAAG-- i proCoq1.NW_012152163v1 I 37 I 215 s otoGar3.GL873522 1194277 320 + 48283576 CAGCATGGCGGTGCCCACAGCGGCCATGGGGCCGTCGGCGCTGGGCCAGAGCGGTCCTGGCTCGATGGCCCCCTGGTGCTCAGTGAGCAGCGGCCCGTCGCGCTACGTGCTCGGGATGCAGGAACTGTTCCGGGGCCACAGCAAGACGCGCGAGTTCCCGGCGCATAGCGCCAAGGTACACTCTGTGGCCTGGAGCTGCGACGGGCGTCGCTTAGCCTCGGGGTCCTTCGACAAGACGGCCAGCGTCTTCTTGCTGGAGAAGGACCGATTGGTGAGCTGCCGGGGCCCGTCTCAGGCT--AGAGAAAGGGGCTGTGATGAAG-- i otoGar3.GL873522 C 0 I 2 s mm10.chr13 65952828 313 - 120421639 AGGCATGGCGGCGCCCGCTGCGGTCCTGGGCCCCTCGGCCCTCGGCCAGAGCGGCCCCGGCTCGATGGCGCCCTGGTGCTCAGTGAGCAGTGGCCCGTCTCGTTACGTGCTCGGGATGCAGGAGCTCTTCCGAGGCCACAGCAAGACGCGCGAATTCCCGGCGCACAGTGCTAAGGTGCACTCGGTCGCCTGGAGCTGCGATGGCCGTCGCTTGGCCTCGGGGTCCTTCGACAAGACTGCCAGCGTGTTCTTGCTGGAGAAGGACCGGCTGGTGAGCTTGTAGGGCACGGGCTTGGCG--GAGAAGAGGG-CTGTG-------- i mm10.chr13 C 0 C 0 s canFam3.chr4 37131015 316 + 88276631 CGCCATGGCGGTCCCTGCGGCGGCCATGGGGCCCTCGGCGCTGGGCCAGAGTGGTCCTGGCTCAATGGCTCCCTGGTGCTCAGTGACCAGTGGCCCAACACGCTACGTGCTGGGAATGCAGGAGCTGTTCCGCGGCCACAGCAAGACGCGCGAATTCCCTGCACACAGCGCCAAGGTGCACTCGGTGGCTTGGAGCTGCGACGGGCGTCGCCTGGCCTCGGGGTCTTTCGACAAGACGGCCAGCGTTTTCCTACTGGAGAAGGACCGGTTGGTAAGCTGAC------CGGTCCAGGCCAGAGAGAGAGGGGCTGTGGTAGAG-- i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 212774 322 - 960158 CAGCATGGCGGTCCCAGCGGGGGCCCTGGGGACTTCGGCGTTGGGCCAGAGTGGTCCCGGCTCAATGGCCCCCTGGTGCTCAGTGACCAGTGGCCCGTCTCGCTACGTGCTTGGGATGCAGGAGCTGTTCCGAGGCCACAGTAAGACGCGCGAGTTCCCAGCGCACAGCGCCAAGGTACACTCGGTGGCCTGGAGCTGCGACGGGCGCCGCCTGGCCTCGGGGTCCTTCGACAAGACGGCCAGCGTTTTCTTGCTGGAGAAGGACCGGTTGGTGAGCTGCCAGGGCCTGGCCCAgggt--agggagaggggctgtggtgagaaa i dasNov3.JH562710 C 0 C 0 a score=3059488.000000 s hg38.chr5_KI270795v1_alt 10445 321 + 131892 TGAGGTGCGGTAGTGGGAGAGCGAAT-GGGGGCGAACGGAGCCGCGGGGGTG--AAAGGAGAGTGGGTTTG------AGGGAAGGGG-AAAGGGGGAGTGTGGA---GAT-------------------GAGGAGGGAGTAGGGAG-----------A---AGGTGGAGTGTGGGGGTGAC-------------------GGGGTCGTGAGGGGTGAGGAGAGGAAGAC-------------------TGGGGGCGTGTGAAGAGT-------GTGGAAGTAAGGAGGT--TGGCGATGG--CGGGTGAAGGTGAGGAGAG-------------GGTGGATGGGACAGGGCTGCGATGGG-AGCCT-TACTCGTTTGGAGTCGAATCCTGTGCTGATAAGAAGTGGCTAGGGGCTgtggtggtggt-----------ggtgg s panTro5.chr5 5259067 321 - 181907262 TGAGGTGCGGTAGTGGGAGAGCGAAT-GGGGGCGAACGGAGCCGCGGgggtg--aaaggagagtgggtttg------agggaagggg-aaagggggagtgtgga---gat-------------------gaggagggagtagggag-----------a---aggtggaGTGTGGGGGTGAC-------------------GGGGTCGTGAGGGGTGAGGAGAGGAAGAT-------------------TGGGGGCGTGTGAAGAGT-------GTGGAAGTAAGGAGGT--TGGCGATGG--CGGGTGAAGGTGAGGAGAG-------------GGTGGATGGGACGGGGCTGCGATGGG-AGCCT-TACTCGTTTGGAGTCGAATCCTGTGCTGGTAAGAAGTGGCTAGGGGCTgtggtggtggt-----------ggtgg i panTro5.chr5 C 0 C 0 s panPan2.chr5 5521452 321 - 183735486 TGAGGTGCGGTAGTGGGAGAGCGAAT-GGGGGCGAACGGAGCCGCGGgggtg--aaaggagagtgggtttg------agggaagggg-aaagggggagtgtgga---gat-------------------gaggagggagtagggag-----------a---aggtggaGTGTGGGGGTGAC-------------------GGGGTCGTGAGGGGTGAGGAGAGGAAGAT-------------------TGGGGGCGTGTGAAGAGT-------GTGGAAGTAAGGAGGT--TGGCGATGG--CGGGTGAAGGTGAGGAGAG-------------GGTGGATGGGACGGGGCTGCGATGGG-AGCCT-TACTCGTTTGGAGTCGAATCCTGTGCTGGTAAGAAGTGGCTAGGGGCTgtggtggtggt-----------ggtgg i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1619021 318 + 3967317 TGAGGTGCGGTAGTGGGAGAGCGAAT-GGGGGCGAACGGAGCCGAGGGCGTG--AAAGGAGAGTGGGTTTG------AGGGAAGGGG-AAAGGGGGAGTGTGGA---GAT----------------------GAGGGAGTAGGGAG-----------A---AGGTGGAGTGTGGGGGTGAC-------------------GGGGTCGTGAGGGGTGAGGAGAGAAAGAT-------------------TGGGGGCGTGTGAAGAGT-------GTGGAAGTAAGGAGGT--TGGCGATGG--CGGGTGAAGGTGAGGAGAG-------------GGTGGATGGGACGGGGCTGCGATGGG-AGCCT-TACTCGTTTGGAGTCGAATCCTGTGCTGGTAAGAAGTGGCTAGGGGCTgtggtggtgat-----------ggtgg i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4470690 324 + 163208435 TGAGGTGCGGTAGTGGGAGAGCGAAT-GGGGGCGAACGGAGCCCCAGGGGTG--AAAGGAGAGTGGGCTTGAGGGAAAGGGAAAGGG-AAAGGGGGAGTGTGGA---GAT-------------------GAGGAGGAAGTGGGG-----------------AGGTGGAGTGTGGGGTTGAC-------------------GGGGTCGTGAGGGGTGAGGAGAGGAAGAT-------------------GGGGGGCGTGTGGAGAGT-------GTGGAAGTAAGGAGGT--TGGCGGTGG--CGGGTGGAGGTTAGGAGAG-------------AGTGGATGGGACGGGGCTGCGGTGGG-AGCCT-TACCCGTTTGGAGTCGAAtggtgtgctggtaagaagtggctaggggctgtggtggtggt-----------ggtgg i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5704117 341 - 180051392 TGAGGTGTGGTAGAGGGAGAGCGAATGGGGGGCGAACGGGGCCGTGGGGTTG--AAAGGAGAGTGGACTTg------agggaggggg-aaagggggagtatgga---gatgaggggggagtgtggagatgaggagggagtggggag-----------a---aggtggagtgtgggggtgac-------------------ggggtcgtgaggggtgaggagaggaagaT-------------------TGGGGGCGTGTGGAGAGT-------GTGGAAGTAAGGAGGT--TGGCGATGG--CGGGTGAAGGTGAGGAGAG-------------GGTGGATGGGACCGGGCTGCGGTGGG-AGCCT-TACTCGTTTGGAGTCGATTCGTGTGCTGGTAAGGAGTGGCTAGGGGCTGTGGTGGTGGT-----------GGTGA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5895911 341 - 181584905 TGAGGTGTGGTAGAGGGAGAGCGAATGGGGGGCGAACGGGGCCGTGGGGTTG--AAAGGAGAGTGGACTTg------agggaggggg-aaagggggagtatgga---gatgaggggggagtgtggagatgaggagggagtggggag-----------a---aggtggagtgtgggggtgac-------------------ggggtcgtgaggggtgaggagaggaagaT-------------------TGGGGGCGTGTGGAGAGT-------GTGGAAGTAAGGAGGT--TGGCGATGG--CGGGTGAAGGTGAGGAGAG-------------GGTGGATGGGACCGGGCTGCGGTGGG-AGCCT-TACTCGTTTGGAGTCGATTCGTGTGCTGGTAAGGAGTGGCTAGGGGCTGTGGTGGTGGT-----------GGTGA i macFas5.chr6 C 0 I 54 s macNem1.NW_012018466v1 924981 344 - 16193990 TGAGGTGTGGTAGAGGGAGAGCGAATGGGGGGCGAACGGGGCCGTGGGGTTG--AAAGGAGAGTGGACTTg------agggaggggg-aaagggggagtatggagatgatgaggggggagtgtggagatgaggagggagtggggag-----------a---aggtggagtgtgggggtgac-------------------ggggtcgtgaggggtgaggagaggaagaT-------------------TGGGGGCGTGTGGAGAGT-------GTGGAAGTAAGGAGGT--TGGCGATGG--CGGGTGAAGGTGAGGAGAG-------------GGTGGATGGGACCGGGCTGCGGTGGG-AGCCT-TACTCGTTTGGAGTCGATTCGTGTGCTGGTAAGGAGTGGCTAGGGGCTGTGGTGGTGGT-----------GGTGA i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1741978 341 - 21434487 TGAGGTGTGGTAGAGGGAGAGCGAATGGGGGGCGAACGGGGCCGTGGGGTTG--AAAGGAGAGTGGACTTG------AGGGAGGGGG-AAAGGGGGAGTAGAGA---GATGAGGGGGGAGTGTGGAGATGAGGAGGGAGTGGGGAG-----------A---AGGTGGAGTGTGGGGGTGAC-------------------AGGGTCGTGAGGGGTGAGGAGAGGAAGAT-------------------TGGGGGCGTGTGGAGAGT-------GTGGAAGTAAGGAGGT--TGGCGATGG--CGGGTGAAGGTGAGGAGAG-------------GGTGGATGGGACGGGGCTGCGGTGGG-AGCCT-TACTCGTTTGGAGTCGATTCGTGTGCTGGTAAGGAGTGGCTAGGGGCTGTGGTGGTGGT-----------GGTGA i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4710872 339 - 82825804 TGAGGTGTGGTAGAGGGAGAGCGAATGGGGGGCGAACGGGGCCGTGGGGTTG--AAAG--GAGTGGACTTg------agggaggggg-aaagggggagtatgga---gatgaggggggagtgtggagatgaggagggagtggggag-----------a---aggtggagtgtgggggtgac-------------------agggtcgtgaggggtgaggagaggaagaT-------------------TGGGGTCGTGTGGAGAGT-------GTGGAAGTAAGGAGGT--TGGCGATGG--CGGGTGAAGGTGAGGAGAG-------------GGTGAATGGGACGGGGCTGCGGTGGG-AGCCT-TACTCGTTTGGAGTCGATTCGTGTGCTGGTAAGGAGTGGCTAGGGGCTGTGGTGGTGGT-----------GGTGA i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 206126 341 + 2521317 TGAGGTGTGGTAGAGGGAGAGCGAATGGGGGGCGAACGGGGCCGTGGGGTTG--AAAGGAGAGTGGACTTG------AGGGAGAGGG-AAAGGGGGAGTAGGGA---GATGAGGGGGGAGTGTGGAGATGAGGAGGGAGTGGGGAG-----------A---AGGTGGAGTGTGGGGGTGAC-------------------AGGGTCGTGAGGGGTGAGGAGAGGAAGAT-------------------TGGGGGCGTGTGGAGAGT-------GTGGAAGTAAGGAGGT--TGGCGATGG--CGGGTGAAGGTGAGGAGAG-------------GATGGATGGGACGGGGCTGCGGTGGG-AGCCT-TACTCGTTTGGAGTCGATTCGTGTGCTGGTAAGGAGTGGCTAGGGGCTGTGGTGGTGGT-----------GGTGA i manLeu1.NW_012103943v1 C 0 I 55 s colAng1.NW_012115755v1 1697326 340 - 2415367 TGAGGTGTGGTAGTGGGAGAGCGAATGGGGGGCGAACTGGGCCGTGGGGTTG--AAAGGAGAGCGGACTTg------agggaggggg-aaagggggagtatgga---gatgaggggggagtgtggagatgaggagggagtggggag-----------a---aggtggagtgtgggggtgac-------------------ggggtcgtgaggggtgaggagaggaagaT-------------------TGGGG-CGTGTGGAGAGT-------GTGGAAGTAAGGAGGT--TGGCGATGG--CGGTTGAAGGTGAGGATAG-------------GGTGGATGGGACGGGGCTGCAGTGGG-AGCCT-TACTCGTTTGGAGTCGATTCGTGTGCTGGTAAGGAGTGGCTAGGGGCTGTGGTGGTGGT-----------GGTGA i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142767942 308 - 204313951 CGAGGTGCGGTAGTAGGAGAGCGAAT-GGGGGCAAACGAGGCCTCGGGAGTG--AAAGGAGAGTGGGCTTg------agggagggggcaagaggagagtgtaga---gat-------------------gaggaa-------ggag-----------a---aggcggagtgtgggggtgac-------------------ggggtcgtgaaggatgaggagaggaagac-------------------tggggg--------aagt-------gtggaaataaggaggt--tggcgatag--tgggtgaaggtgaggagag-------------ggtggatgggACCGGGCTGCGGTGGACGTCCT-TATTCGTGTGGAGTAGAATCGTGTGCTGATAAGGAGTGACTAGGGGCTGTAGTAGTGGT-----------GGTGA i calJac3.chr2 C 0 I 12 s saiBol1.JH378186 2166439 310 + 10068113 CGAGGTGCGGTAGTGGGAGGGC-AAT-GGGGGCGAACGAGGCCGCGGGAGTG--AAAGGAGAGTGGCCTTG------AGggagg----acgaggagagtgtgga---gat-------------------gaggaaggattggggag-----------a---aggcggagtgtgggggtgac-------------------ggggtcgtgagggatgaggagaggaagac-------------------tggggg--------aagt-------gtggaaggagggaggt--tggcgatag--cgggtgagggtgaggagag-------------ggtggaggggACCGGGCTGCGGGGGACATCCT-TTCTCGTGTGGAGTCGAATCGTGTGCTGATAAGGAGTGACTAGGGGCTGTAGTAGTGGT-----------GGTGA i saiBol1.JH378186 C 0 I 12 s cebCap1.NW_016107999v1 22684 297 - 709587 CGAGATGCGGTAGTGGGAGAGCGAAT-GGGGGCGAACGAGGCCGCGGGAGTGATAAAGGAGAGTGGGCTTG------AAGAAGGAGG-ACGAGGAGAGTGTGGA---GAT-------------------GAGGAAGGAATGGGGAG-----------A---AGGCGGAGTGTGGGGGTGAC-------------------GGGGTCGTGA-GGATGAGGAGAGGAAGAC-------------------TGGGGG--------AAGT-------GTGGAAGTAAGGAGGT--TGGCGATCG--TGGATGAAGGTGAGGAGAG-------------GGT------------------GTGGACATCCT-TACTTGTGTGGAGTCGAATCGTGTGCTGATAAGGAGTGACTAGGGGCTGTATTAGTGGT-----------GGTGA i cebCap1.NW_016107999v1 C 0 I 54 s aotNan1.NW_018501968v1 1103528 305 - 2246441 CGAGGTGCGGTAGTGGGAGAGCGAAT-GGGGGCGAACGAGGCCGCGGGAGTG--AAAGGAGAGTGGGCCTG------AGGGAGGGGG-ACGAGGAGAGTGTGGA---GAT-------------------GAGGAA--------GAG-----------A---AGGAGGAGTGTGGGGGTGAC-------------------GAGGTCGTGAGGGATGAGGAGAGGAAGAC-------------------T-GGGG--------AAGT-------GCGGAGGTAAGGAGGT--TGGCGATAG--CGGGTGGAGGTGAGGAGAG-------------AGTGGATGGGACCGAGCTGCCGTGGACATCCT-TACTCGTGTGGAGCCGAATCGTGTGCTGATAAGGAGTGACTAGGGGCTGTAGTAGTGGT-----------GGTGA i aotNan1.NW_018501968v1 C 0 I 54 s otoGar3.GL873522 1194599 300 + 48283576 AGGTGTGGGGTTGAGGGAGAAGGGA--GTGGGCGGACAGAGC-----GCGTA--AGAGGAGAGCGGGATTG------AGGAGAGGAG-CGGGGCGGAGCATGGA---GGA----------------AGTGTGGAGAGACTAGGGGG-----------AGTGATGGGGTGTGTGGGCGTGACCAGGCGGAGTGCCCTGGCTGGGGTCGCGAGAGGTGAGGAGAGAAAGAC-------------------TGGAGATGTATAGGAAGT-------GTTGCAGTGAGTTG----TGGGGATGG-------GAGGGGGAGCAGTG-------------GGTGG---------------GAAGGG-AG-------------------GAACGGTGTGTTGGTGAGGAGTGCCCAGGTACTGTTGTGTTGGG-----------GGGGC i otoGar3.GL873522 I 2 I 4 s mm10.chr13 65953141 271 - 120421639 ---------------------------------------TGCGGAGGGAGAA--AAAGCAGGA-------G------AGGTAGGGGT-ATGGCCTGTCGTTGGC---GGT----------------GATGAGGAAGGGGTTTGGGG-----------C---TGGAAGA--GTTGGAATGAC-------------------GAAG-----------GGGGTGAGGCTGCC-------------------TGGCGGAGAGCAGAGAGCGAACTTAGTGGCAGTAAAGAGGT-GTGGCGAC-G--TGGCTGCGGGCCGGGGGAG-------------GTTGAA----GTCAGGTGGCAGAAAG-----------TGGTGAGGGTCTAGAAGAGCCCTGGTGACGAGTGGCTAGGGACTAATGGGGTGGTAGAGCCCCTAGGGTGG i mm10.chr13 C 0 C 0 s canFam3.chr4 37131331 340 + 88276631 CGAggtgtggtgttgagggcgagagt-gggagtg-----------------g--aaaggggggtg-----g------aggcgagggg-agaggaggggtgtggg---gct-------------------aagggggatatgtagtgctggagtgacca---gagtggtgcttggggatctg-------------------ggggctgtg------gtggagaggaagatggtggtggtaaaagggaggtgagggtgcgagg-gagt-------gtggCAGTAAAGGAGCTGTGAAGATGAGCGGGGAGTAGGCTAGGACAGGATGAAGACTGGTGGTGGACGGGACTGGAGTGAGGTGAG-GGTGTGTGAGAGTGATGGAAGGAGTTGTGTGGTGGTGAGGAGTGGCTAGGGTCTGTGGTGGTGGT-----------GGGGT i canFam3.chr4 C 0 I 8 s dasNov3.JH562710 213096 188 - 960158 ggaggtgtgatggtcagagagggaaa----------------------------aagggaaggtggg---g------tgaggagggg-cgagggacagtgaggg---ggt----------------------gtggcagtgtggag-----------g--------gagtgtggtgatgag-------------------tgggcgaatggagatgaggaggggag----------------------tgaggaCGTGAG--GACT------------------GAAGT--TGGTGGTGA----------------------------------GGTGG----------------------GTCCC-T----------------------------TTGAAAGTGGTAGGGCGTCCTG------------------------ i dasNov3.JH562710 C 0 C 0 e proCoq1.NW_012152163v1 695380 215 - 940639 I a score=22887.000000 s hg38.chr5_KI270795v1_alt 10766 6 + 131892 tggtgg s panTro5.chr5 5259388 6 - 181907262 tggtgg i panTro5.chr5 C 0 C 0 s panPan2.chr5 5521773 6 - 183735486 tggtgg i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1619339 6 + 3967317 tggtgg i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4471014 6 + 163208435 tgAGGA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5704458 5 - 180051392 -GGAGG i rheMac8.chr6 C 0 I 49 s macNem1.NW_012018466v1 925325 5 - 16193990 -GGAGG i macNem1.NW_012018466v1 C 0 I 49 s cerAty1.NW_012007035v1 1742319 5 - 21434487 -GGAGG i cerAty1.NW_012007035v1 C 0 I 49 s chlSab2.chr23 4711211 5 - 82825804 -GGAGG i chlSab2.chr23 C 0 I 49 s colAng1.NW_012115755v1 1697666 5 - 2415367 -GGAGG i colAng1.NW_012115755v1 C 0 I 49 s calJac3.chr2 142768262 6 - 204313951 TGGAAG i calJac3.chr2 I 12 C 0 s saiBol1.JH378186 2166761 6 + 10068113 TGGAAG i saiBol1.JH378186 I 12 C 0 s otoGar3.GL873522 1194903 6 + 48283576 TGGTGG i otoGar3.GL873522 I 4 I 14 s mm10.chr13 65953412 5 - 120421639 -AGAGG i mm10.chr13 C 0 I 1 s canFam3.chr4 37131679 5 + 88276631 GGGTG- i canFam3.chr4 I 8 C 0 e cebCap1.NW_016107999v1 22981 54 - 709587 I e macFas5.chr6 5896252 54 - 181584905 I e proCoq1.NW_012152163v1 695380 215 - 940639 I e dasNov3.JH562710 213284 0 - 960158 C e aotNan1.NW_018501968v1 1103833 54 - 2246441 I e manLeu1.NW_012103943v1 206467 55 + 2521317 I a score=7631.000000 s hg38.chr5_KI270795v1_alt 10772 3 + 131892 tgg s panTro5.chr5 5259394 3 - 181907262 tgg i panTro5.chr5 C 0 C 0 s panPan2.chr5 5521779 3 - 183735486 tgg i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1619345 3 + 3967317 tgg i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4471020 3 + 163208435 GGG i nomLeu3.chr2 C 0 I 47 s calJac3.chr2 142768268 3 - 204313951 TGA i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2166767 3 + 10068113 TGA i saiBol1.JH378186 C 0 C 0 s otoGar3.GL873522 1194923 3 + 48283576 TGG i otoGar3.GL873522 I 14 I 3 s mm10.chr13 65953418 3 - 120421639 AGG i mm10.chr13 I 1 C 0 s canFam3.chr4 37131684 3 + 88276631 TAA i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 213284 3 - 960158 TGG i dasNov3.JH562710 C 0 C 0 e cebCap1.NW_016107999v1 22981 54 - 709587 I e cerAty1.NW_012007035v1 1742324 49 - 21434487 I e macNem1.NW_012018466v1 925330 49 - 16193990 I e rheMac8.chr6 5704463 49 - 180051392 I e macFas5.chr6 5896252 54 - 181584905 I e proCoq1.NW_012152163v1 695380 215 - 940639 I e aotNan1.NW_018501968v1 1103833 54 - 2246441 I e colAng1.NW_012115755v1 1697671 49 - 2415367 I e manLeu1.NW_012103943v1 206467 55 + 2521317 I e chlSab2.chr23 4711216 49 - 82825804 I a score=-1840.000000 s hg38.chr5_KI270795v1_alt 10775 1 + 131892 -t s panTro5.chr5 5259397 1 - 181907262 -t i panTro5.chr5 C 0 I 55 s panPan2.chr5 5521782 1 - 183735486 -t i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1619348 1 + 3967317 -t i gorGor5.CYUI01015413v1 C 0 C 0 s calJac3.chr2 142768271 1 - 204313951 -T i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2166770 1 + 10068113 -T i saiBol1.JH378186 C 0 C 0 s otoGar3.GL873522 1194929 1 + 48283576 -T i otoGar3.GL873522 I 3 C 0 s mm10.chr13 65953421 1 - 120421639 -C i mm10.chr13 C 0 I 1 s canFam3.chr4 37131687 1 + 88276631 -T i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 213287 1 - 960158 G- i dasNov3.JH562710 C 0 C 0 e cebCap1.NW_016107999v1 22981 54 - 709587 I e nomLeu3.chr2 4471023 47 + 163208435 I e cerAty1.NW_012007035v1 1742324 49 - 21434487 I e macNem1.NW_012018466v1 925330 49 - 16193990 I e rheMac8.chr6 5704463 49 - 180051392 I e macFas5.chr6 5896252 54 - 181584905 I e proCoq1.NW_012152163v1 695380 215 - 940639 I e aotNan1.NW_018501968v1 1103833 54 - 2246441 I e colAng1.NW_012115755v1 1697671 49 - 2415367 I e manLeu1.NW_012103943v1 206467 55 + 2521317 I e chlSab2.chr23 4711216 49 - 82825804 I a score=808.000000 s hg38.chr5_KI270795v1_alt 10776 1 + 131892 g s panPan2.chr5 5521783 1 - 183735486 g i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1619349 1 + 3967317 g i gorGor5.CYUI01015413v1 C 0 I 55 s calJac3.chr2 142768272 1 - 204313951 A i calJac3.chr2 C 0 I 1 s saiBol1.JH378186 2166771 1 + 10068113 A i saiBol1.JH378186 C 0 I 1 s otoGar3.GL873522 1194930 1 + 48283576 G i otoGar3.GL873522 C 0 I 2 s canFam3.chr4 37131688 1 + 88276631 G i canFam3.chr4 C 0 I 25 s dasNov3.JH562710 213288 1 - 960158 A i dasNov3.JH562710 C 0 C 0 e cebCap1.NW_016107999v1 22981 54 - 709587 I e mm10.chr13 65953422 1 - 120421639 I e nomLeu3.chr2 4471023 47 + 163208435 I e cerAty1.NW_012007035v1 1742324 49 - 21434487 I e macNem1.NW_012018466v1 925330 49 - 16193990 I e rheMac8.chr6 5704463 49 - 180051392 I e macFas5.chr6 5896252 54 - 181584905 I e proCoq1.NW_012152163v1 695380 215 - 940639 I e aotNan1.NW_018501968v1 1103833 54 - 2246441 I e colAng1.NW_012115755v1 1697671 49 - 2415367 I e manLeu1.NW_012103943v1 206467 55 + 2521317 I e chlSab2.chr23 4711216 49 - 82825804 I e panTro5.chr5 5259398 55 - 181907262 I a score=-5937.000000 s hg38.chr5_KI270795v1_alt 10777 2 + 131892 --gt s panPan2.chr5 5521784 2 - 183735486 --gt i panPan2.chr5 C 0 I 62 s calJac3.chr2 142768274 1 - 204313951 --G- i calJac3.chr2 I 1 C 0 s saiBol1.JH378186 2166773 1 + 10068113 --G- i saiBol1.JH378186 I 1 C 0 s mm10.chr13 65953423 1 - 120421639 ---T i mm10.chr13 I 1 I 1 s dasNov3.JH562710 213289 2 - 960158 AT-- i dasNov3.JH562710 C 0 C 0 e cebCap1.NW_016107999v1 22981 54 - 709587 I e nomLeu3.chr2 4471023 47 + 163208435 I e otoGar3.GL873522 1194931 2 + 48283576 I e cerAty1.NW_012007035v1 1742324 49 - 21434487 I e macNem1.NW_012018466v1 925330 49 - 16193990 I e rheMac8.chr6 5704463 49 - 180051392 I e macFas5.chr6 5896252 54 - 181584905 I e canFam3.chr4 37131689 25 + 88276631 I e proCoq1.NW_012152163v1 695380 215 - 940639 I e aotNan1.NW_018501968v1 1103833 54 - 2246441 I e colAng1.NW_012115755v1 1697671 49 - 2415367 I e manLeu1.NW_012103943v1 206467 55 + 2521317 I e chlSab2.chr23 4711216 49 - 82825804 I e gorGor5.CYUI01015413v1 1619350 55 + 3967317 I e panTro5.chr5 5259398 55 - 181907262 I a score=-4992.000000 s hg38.chr5_KI270795v1_alt 10779 4 + 131892 --acgt s calJac3.chr2 142768275 4 - 204313951 --GCGT i calJac3.chr2 C 0 I 25 s saiBol1.JH378186 2166774 4 + 10068113 --GCGT i saiBol1.JH378186 C 0 I 25 s otoGar3.GL873522 1194933 4 + 48283576 --AGGA i otoGar3.GL873522 I 2 C 0 s mm10.chr13 65953425 4 - 120421639 --ATTT i mm10.chr13 I 1 I 5 s canFam3.chr4 37131714 3 + 88276631 ---CCT i canFam3.chr4 I 25 I 1 s dasNov3.JH562710 213291 4 - 960158 GAGC-- i dasNov3.JH562710 C 0 C 0 e cebCap1.NW_016107999v1 22981 54 - 709587 I e nomLeu3.chr2 4471023 47 + 163208435 I e cerAty1.NW_012007035v1 1742324 49 - 21434487 I e macNem1.NW_012018466v1 925330 49 - 16193990 I e rheMac8.chr6 5704463 49 - 180051392 I e macFas5.chr6 5896252 54 - 181584905 I e proCoq1.NW_012152163v1 695380 215 - 940639 I e aotNan1.NW_018501968v1 1103833 54 - 2246441 I e colAng1.NW_012115755v1 1697671 49 - 2415367 I e manLeu1.NW_012103943v1 206467 55 + 2521317 I e chlSab2.chr23 4711216 49 - 82825804 I e gorGor5.CYUI01015413v1 1619350 55 + 3967317 I e panPan2.chr5 5521786 62 - 183735486 I e panTro5.chr5 5259398 55 - 181907262 I a score=-8419.000000 s hg38.chr5_KI270795v1_alt 10783 14 + 131892 tg----gtgg-------tacgttgg s otoGar3.GL873522 1194937 25 + 48283576 TGTCCTGTGGGAATGAGCAGGTGGG i otoGar3.GL873522 C 0 I 1 s mm10.chr13 65953434 11 - 120421639 -------------TGATAGCGCAG- i mm10.chr13 I 5 C 0 s canFam3.chr4 37131718 14 + 88276631 -------TGGGAGTGAGCAAG---- i canFam3.chr4 I 1 I 7 s dasNov3.JH562710 213295 10 - 960158 --------------AGGTGGGCCG- i dasNov3.JH562710 C 0 C 0 e cebCap1.NW_016107999v1 22981 54 - 709587 I e saiBol1.JH378186 2166778 25 + 10068113 I e nomLeu3.chr2 4471023 47 + 163208435 I e calJac3.chr2 142768279 25 - 204313951 I e cerAty1.NW_012007035v1 1742324 49 - 21434487 I e macNem1.NW_012018466v1 925330 49 - 16193990 I e rheMac8.chr6 5704463 49 - 180051392 I e macFas5.chr6 5896252 54 - 181584905 I e proCoq1.NW_012152163v1 695380 215 - 940639 I e aotNan1.NW_018501968v1 1103833 54 - 2246441 I e colAng1.NW_012115755v1 1697671 49 - 2415367 I e manLeu1.NW_012103943v1 206467 55 + 2521317 I e chlSab2.chr23 4711216 49 - 82825804 I e gorGor5.CYUI01015413v1 1619350 55 + 3967317 I e panPan2.chr5 5521786 62 - 183735486 I e panTro5.chr5 5259398 55 - 181907262 I a score=-310.000000 s hg38.chr5_KI270795v1_alt 10797 1 + 131892 t s panTro5.chr5 5259453 1 - 181907262 A i panTro5.chr5 I 55 C 0 s nomLeu3.chr2 4471070 1 + 163208435 A i nomLeu3.chr2 I 47 C 0 s otoGar3.GL873522 1194963 1 + 48283576 T i otoGar3.GL873522 I 1 C 0 e cebCap1.NW_016107999v1 22981 54 - 709587 I e saiBol1.JH378186 2166778 25 + 10068113 I e mm10.chr13 65953445 0 - 120421639 C e calJac3.chr2 142768279 25 - 204313951 I e cerAty1.NW_012007035v1 1742324 49 - 21434487 I e macNem1.NW_012018466v1 925330 49 - 16193990 I e rheMac8.chr6 5704463 49 - 180051392 I e macFas5.chr6 5896252 54 - 181584905 I e canFam3.chr4 37131732 7 + 88276631 I e proCoq1.NW_012152163v1 695380 215 - 940639 I e dasNov3.JH562710 213305 0 - 960158 C e aotNan1.NW_018501968v1 1103833 54 - 2246441 I e colAng1.NW_012115755v1 1697671 49 - 2415367 I e manLeu1.NW_012103943v1 206467 55 + 2521317 I e chlSab2.chr23 4711216 49 - 82825804 I e gorGor5.CYUI01015413v1 1619350 55 + 3967317 I e panPan2.chr5 5521786 62 - 183735486 I a score=17100.000000 s hg38.chr5_KI270795v1_alt 10798 1 + 131892 g s panTro5.chr5 5259454 1 - 181907262 G i panTro5.chr5 C 0 C 0 s panPan2.chr5 5521848 1 - 183735486 G i panPan2.chr5 I 62 C 0 s gorGor5.CYUI01015413v1 1619405 1 + 3967317 G i gorGor5.CYUI01015413v1 I 55 C 0 s nomLeu3.chr2 4471071 1 + 163208435 G i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5704512 1 - 180051392 G i rheMac8.chr6 I 49 C 0 s macFas5.chr6 5896306 1 - 181584905 G i macFas5.chr6 I 54 C 0 s macNem1.NW_012018466v1 925379 1 - 16193990 G i macNem1.NW_012018466v1 I 49 C 0 s cerAty1.NW_012007035v1 1742373 1 - 21434487 G i cerAty1.NW_012007035v1 I 49 C 0 s chlSab2.chr23 4711265 1 - 82825804 G i chlSab2.chr23 I 49 C 0 s colAng1.NW_012115755v1 1697720 1 - 2415367 G i colAng1.NW_012115755v1 I 49 C 0 s calJac3.chr2 142768304 1 - 204313951 G i calJac3.chr2 I 25 C 0 s saiBol1.JH378186 2166803 1 + 10068113 G i saiBol1.JH378186 I 25 C 0 s cebCap1.NW_016107999v1 23035 1 - 709587 G i cebCap1.NW_016107999v1 I 54 C 0 s aotNan1.NW_018501968v1 1103887 1 - 2246441 G i aotNan1.NW_018501968v1 I 54 C 0 s otoGar3.GL873522 1194964 1 + 48283576 G i otoGar3.GL873522 C 0 C 0 s mm10.chr13 65953445 1 - 120421639 G i mm10.chr13 C 0 C 0 s canFam3.chr4 37131739 1 + 88276631 G i canFam3.chr4 I 7 C 0 s dasNov3.JH562710 213305 1 - 960158 G i dasNov3.JH562710 C 0 C 0 e proCoq1.NW_012152163v1 695380 215 - 940639 I e manLeu1.NW_012103943v1 206467 55 + 2521317 I a score=254853.000000 s hg38.chr5_KI270795v1_alt 10799 21 + 131892 gtacgttggtggtaGAGTAAG s panTro5.chr5 5259455 21 - 181907262 GAACGTTGGTGGTAGAGTAAG i panTro5.chr5 C 0 C 0 s panPan2.chr5 5521849 21 - 183735486 GAACGTTGGTGGTAGAGTAAG i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1619406 21 + 3967317 GAACGTTGGTGGTAGAGTAAG i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4471072 21 + 163208435 GAACGTTGGTGGTAGAGTAAG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5704513 21 - 180051392 GAACGTTGATGGTACAGTAAG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5896307 21 - 181584905 GAACGTTGATGGTACAGTAAG i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 925380 21 - 16193990 GAACGTTGATGGTACAGTAAG i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1742374 21 - 21434487 GAACGTTGATGGTACAGTAAG i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4711266 21 - 82825804 GAACGTTGATGATACAGTAAG i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 206522 21 + 2521317 GAACGTTGATGGTACAGTAAG i manLeu1.NW_012103943v1 I 55 C 0 s colAng1.NW_012115755v1 1697721 15 - 2415367 GAACGTTGG------AGTAAG i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142768305 21 - 204313951 GAACGTTGATGGTAGAGTAAG i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2166804 21 + 10068113 GAACGTTGATGGTAGAGTAGG i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 23036 21 - 709587 GAACGTTGATGGTAGAGTAAG i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1103888 21 - 2246441 GAACGTTGATGGTAGAGTAAG i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1194965 21 + 48283576 GGACTTTGGTGGTAGAGTAAA i otoGar3.GL873522 C 0 C 0 s mm10.chr13 65953446 19 - 120421639 ACAGGTTGGT--TGAGGTGGT i mm10.chr13 C 0 C 0 s canFam3.chr4 37131740 21 + 88276631 GAACGTCGGTGGTAGAGTAAG i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 213306 21 - 960158 GGACCTTGGTGAGGGAATAAG i dasNov3.JH562710 C 0 C 0 e proCoq1.NW_012152163v1 695380 215 - 940639 I a score=889245.000000 s hg38.chr5_KI270795v1_alt 10820 67 + 131892 GGTGGAAAACCAGGAAGGAGGAGAAGG-CCAGG--GAGGGCACAAAAGTAAGGGCATAGGTGTGGAAGCT-- s panTro5.chr5 5259476 67 - 181907262 GGTGGAAAACCAGGAGGGAGGAGAAGG-CCAGG--GAGGGCACAAAAGTAAGGGCATAGGTGTGGAAGCT-- i panTro5.chr5 C 0 C 0 s panPan2.chr5 5521870 67 - 183735486 GGTGGAAAACCAGGAGGGAGGAGAAGG-CCAGG--GAGGGCACAAAAGTAAGGGCATAGGTGTGGAAGCT-- i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1619427 67 + 3967317 GGTGGAAAACCAGGAAGGAGGAGAAGG-CCAGG--GAGGGCACAAAAGTAAGGGCATAGGTGTGGAAGCT-- i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4471093 67 + 163208435 GGTGAAAAACCAGGAAGGAGGAGGAAG-CCAAG--GAGGTCACAAAAGTAAGTGCATACGTGTGGAAGCT-- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5704534 67 - 180051392 GGTGCAAAATCAGGAAGGAGGAGGAGG-CCAGG--GAGGGCACAAAAATAAGGGCATAGATGTGGAAGCT-- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5896328 67 - 181584905 GGTGCAAAATCAGGAAGGAGGAGGAGG-CCAGG--GAGGGCACAAAAATAAGGGCATAGATGTGGAAGCT-- i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 925401 67 - 16193990 GGTGCAAAATCAGGAAGGAGGAGGAGG-CCAGG--GAGGGCACAAAAATAAGGGCATAGATGTGGAAGCT-- i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1742395 67 - 21434487 GGTGCAAAATCAGGAAGGAGGAGGAGG-CCAGG--GAGGGCACAAAAATAAGGGCATAGATGTGGAAGCT-- i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4711287 67 - 82825804 GGTGCAAAATCAGGAAGGATGAGGAGG-CCAGG--GAGGGCACAAAAATAAGGGCATAGATGTGGAAGCT-- i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 206543 67 + 2521317 GGTGCAAAATCAGGAAGGAGGAGGAGG-CCAGG--GAGGGCACAAAAATAAGGGCATAGATGTGGAAGCT-- i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1697736 67 - 2415367 GGTGAAAAACCAGGAAGGAGGAGGAGG-CCAGG--GAGGGCACAAAAATAAGGGCATAGATGTGGAAGCT-- i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142768326 67 - 204313951 GGTGAAAAACCAGGAAGGAGGAGGAGG-CCAGA--GAGGGCACAAATGTAAGGGCATAGGTGTATAAGGT-- i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2166825 66 + 10068113 GGTGAAAAACCAGGAAGGAGGAGGAGG-CCAGA--GAGGGCACAAAAGTAAGGGCATAGGTGTATGA-GT-- i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 23057 67 - 709587 GGTGAAAAACCAGGAAGGAGGAGGAGG-CCAGA--GAGGGCACAAAAGTAAGGGCATAGGTGTATAAGCT-- i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1103909 67 - 2246441 GGTGAAAAACCAGGAAGGAGGAGGAGG-CCAGA--GAGGGCACAAAAGTAAGGGCATAAGTGTATAAGCT-- i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 695595 66 - 940639 GGTGGAAAACCAGGAAGGAGGAGGA-G-CCAGG--GAGGTCAAAAGAGTAAGGGCACTGGTGTGGAAGCT-- i proCoq1.NW_012152163v1 I 215 I 117 s otoGar3.GL873522 1194986 58 + 48283576 GGTGGAAAACCAGGAAG---------G-CCAGG--GAGGACTAAAGAGTAAGTGCACTGGGGTGGAAGCT-- i otoGar3.GL873522 C 0 C 0 s mm10.chr13 65953465 47 - 120421639 GGTGGAAAA--AGAAAGAAG--GGAGG-CCAGG--AAGGGCCAA----------------TGTCAAAGCT-- i mm10.chr13 C 0 C 0 s canFam3.chr4 37131761 68 + 88276631 TGTGGAGAACCAGAAAGAAGGAGGAAGTCCAGG--GAAGGCAAAAGTGTAAGGGCATTCATGTGGAATCC-- i canFam3.chr4 C 0 I 6 s dasNov3.JH562710 213327 69 - 960158 GATGGGAAACAAGGAAGTA--AGACGG-CTAGGTAAAGAGCGAAGGAGTAAGAGCATTGATGTGTAATCCAT i dasNov3.JH562710 C 0 C 0 a score=960551.000000 s hg38.chr5_KI270795v1_alt 10887 100 + 131892 GAGAAAAACAGTTCAGAAGGCCTGCG----------GAGAA----------------GAGAAG------GGAGAAAGGGCTT----------GGAGGAACTGGATTC------TGAATTACCC----AGATCT----TTACTGGTCCCAGCATACT s panTro5.chr5 5259543 100 - 181907262 GAGAAAAACAGTTCAGAAGGACTGCG----------GAGAA----------------GAGAAG------GGAGAAAGGGCTT----------GGAAGAACTGGATTC------TGAATTACCC----AGATCT----TTACTGGTCCCAGCATACT i panTro5.chr5 C 0 C 0 s panPan2.chr5 5521937 100 - 183735486 GAGAAAAACAGTTCAGAAGGACTGCG----------GAGAA----------------GAGAAG------GGAGAAAGGGCTT----------GGAAGAACTGGATTC------TGAATTACCC----AGATCT----TTACTGGTCCCAGCATACT i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1619494 100 + 3967317 GAGAAAAACAGTTCAGAAGGACTGCG----------GAGAA----------------GAGAAG------GGAGAAAGGGCTT----------GGAAGAACTGGATTC------TGAATTACCC----AGATCT----TTACTGGTCCCAGCATACT i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4471160 100 + 163208435 GAGAAAAACGGTTCAGAAGGACTGCA----------GAGAA----------------GAAAAG------GGAGAAAGGGCTT----------GGAAGAACTGGATTC------TGAATTACCC----AGATCT----TTACTCGACCCAGCATACT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5704601 100 - 180051392 GAGAACAACAGGTCAGAAGGACTGCG----------GAGAA----------------GAGAAG------GGAGAAAGGGCTT----------AGAAGAACTGGATTC------TGAATTACCC----AGATCT----TTACTCGTACCAGCATACC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5896395 100 - 181584905 GAGAACAACAGGTCAGAAGGACTGCG----------GAGAA----------------GAGAAG------GGAGAAAGGGCTT----------AGAAGAACTGGATTC------TGAATTACCC----AGATCT----TTACTCGTACCAGCATACC i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 925468 100 - 16193990 GAGAACAACAGGTCAGAAGGACTGCG----------GAGAA----------------GAGAAG------GGAGAAAGGGCTT----------AGAAGAACTGGATTC------TGAATTACCC----AGATCT----TTACTCGTACCAGCATACC i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1742462 100 - 21434487 GAGAACAACAGTTCAGAAGGACTGCG----------GAGAA----------------GAGAAG------GGAGAAAGGGCTT----------AGAAGAACTGGATTC------TGAACTACCC----AGATCT----TTACTCGTACCAGCATACC i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4711354 100 - 82825804 GAGAACAACAGTTCAGAAGGACTGCG----------GAGAA----------------GAGAAG------GGAGAAAGGGCTT----------AGAAGAACTGGATTC------TGAATTACCC----AGATCT----TTACTCCTACCAGCATACC i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 206610 100 + 2521317 GAGAACAACAGTTCAGAAGGACTGCG----------GAGAA----------------GAGAAG------GGAGAAAGGGCTT----------AGAAGAACTGGATTC------TGAATTACCC----AGATTT----TTACGCGTACCAGCATACC i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1697803 100 - 2415367 GAGAACAACAGTTCAGAAAGACTGCA----------GAGAA----------------GAGAAG------GGAGAAAGGACTT----------GGAAGAACTGGATTC------TGAATTACCC----AGATCT----TTACTCGTCCCAGCATACC i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142768393 94 - 204313951 CAGAGCAA-----CAGAAGGACTGGG----------GAGGA----------------GAGAAA------GCAG-AAGGGCTT----------GGAAGAACTGGATTC------TGAGTTACCC----ATATCT----TTATTGATCCTAGTGTACC i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2166891 105 + 10068113 CAGAGCCA-----CAGAAGGACTGGGGGTGGGGGGCGGGGA----------------GAGAAA------GGAGAAAGGGCTT----------GGAAGAACTGGATTC------TGAGTTACCC----ATGTCT----TTATTGATCCCAGCATACC i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 23124 99 - 709587 CAGAGCAG-----CAGAAGGACTGGG----------GGGGA----------------GAGAAG------GGAGAAAGGGCTT----------GGAAGAACTGGATTC------TGAGTTACCC----ATGTCTATAATTATTGATCCCAGCATACC i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1103976 95 - 2246441 CAGAGCAA-----CAGGAGGACTGGG----------GGAGA----------------GAGAAA------GGAGAAAGGGCTT----------GGAAGAACTGGATTC------TGAGTTACCC----TTATCT----TTATTGATCCCAGCATACC i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1195044 124 + 48283576 ---CAGAATGGTTCAGGGTCACTAGG----------GAGGAAGATG-GGGGAATATTGGGAAGAG-TTTGGAGAAAGGACTT----------GGAAGGATTGGACTC---TTTTAAATTATCCAGATAGATCT----TTGTTGGTCCTTAGATACC i otoGar3.GL873522 C 0 C 0 s mm10.chr13 65953512 103 - 120421639 -------------CAGAGAGGTTCAT----------GGGGG----------------GGGGGG------GGAGGGGGTGTTGTAGTTTTGGAAAAAGAATTAGATTTCTGTTTTGAATTATCC----AGATCT----TTGCTGGTTTCAAGGCACC i mm10.chr13 C 0 C 0 s canFam3.chr4 37131835 115 + 88276631 CAGAACAA---TTCAGAATGATTGGA----------AAGGAAGAGA-AGGGGATATTGGGAAGAATTTTGGGGAAGGGACTT----------GGAAGGACTGGTTTC---TTTTAAATTGTCT--------------TTGTTAGACATAAGGTGCC i canFam3.chr4 I 6 C 0 s dasNov3.JH562710 213396 125 - 960158 CCTCAAAAAAGTTTAGAGGAATTGGG----------GAGGAGGAAATTGGGGATATTGGGAAAAGATTTAAAGAAAAGACGT----------GGAGGGCTTGGATTT---GTTTTGGTTATCC----AGATCG----TTTTGGTTTGCAAAATAGC i dasNov3.JH562710 C 0 C 0 e proCoq1.NW_012152163v1 695661 117 - 940639 I a score=4878093.000000 s hg38.chr5_KI270795v1_alt 10987 300 + 131892 TTGGTTTGAATAAGCTTATAAAGTTACATGCGGAGGCAGT-TACATCTATGTGAAGTCACATCTGGATTCTGTTCTTTC-AGGTCAAAGAAAACAATTATCGGGGACATGGGGATAGTGTGGACCAGCTTTGTTGGCATCCAAGTAATCCTGACCTATTTGTTACGGCGTCCGGAGATAAAACCATTCGCATCTGGGATGTGAGGACTACAAAATGCATTGCCACTGTGAACACTAAAGG----TGACTATTC--AG--AGAGAGGGCAATAGGAAGATAAGCTGTTTGGa-----ttcattcaacaaccatttt s panTro5.chr5 5259643 300 - 181907262 TTGGTTTGAATAAGCTTATAAAGTTATATGCGGAGGCAGT-TACATCTATGTGAAGTCACATCTGGATTCTGTTCTTTC-AGGTCAAAGAAAACAATTACCGGGGACATGGGGATAGTGTGGACCAGCTTTGTTGGCATCCAAGTAATCCTGACCTATTTGTTACGGCATCCGGAGATAAAACCATTCGCATCTGGGATGTGAGGACTACAAAATGCATTGCCACTGTGAACACTAAAGG----TGACTATTC--AG--AGAGAGGGCAATAGGAAGATAAGCTGTTTGGa-----ttcattcaacaaccatttt i panTro5.chr5 C 0 C 0 s panPan2.chr5 5522037 300 - 183735486 TTGGTTTGAATAAGCTTATAAAGTTATATGCGGAGGCAGT-TACATCTATGTGAAGTCACATCTGGATTCTGTTCTTTC-AGGTCAAAGAAAACAATTATCGGGGACATGGGGATAGTGTGGACCAGCTTTGTTGGCATCCAAGTAATCCTGACCTATTTGTTACGGCATCCGGAGATAAAACCATTCGCATCTGGGATGTGAGGACTACAAAATGCATTGCCACTGTGAACACTAAAGG----TGACTATTC--AG--AGAGAGGGCAATAGGAAGATAAGCTGTTTGGa-----ttcattcaacaaccatttt i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1619594 300 + 3967317 TTGGTTTGAATAAGCTTATAAAGTTATATGCGGAGGCAGT-TACATCTATGTGAAGTCACATCTGGATTCTGTTCTTTC-AGGTCAAAGAAAACAATTATCGGGGACATGGGGATAGTGTGGACCAGCTTTGTTGGCATCCAAGTAATCCTGACCTATTTGTTACGGCATCCGGAGATAAAACCATTCGCATCTGGGATGTGAGGACTACAAAATGCATTGCCACTGTGAACACTAAAGG----TGACTATTC--AG--AGAGAGGGCAATAGGAAGATAAGCTGTTTGGa-----ttcattcaacaaccatttt i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4471260 300 + 163208435 TTGGTTTGAATAAGGTTATAAAGTTACATGCGCAGGCAGC-TACATCTATGTGAAGTCACATCTGGATTCTGTTCTTTC-AGGTCAAAGAAAACAATTATCGGGGACATGGGGATAGTGTGGACCAGCTTTGTTGGCATCCAAGTAATCCTGACCTATTTGTTACGGCATCCGGAGATAAAACCATTCGCATCTGGGATGTGAGGACTACAAAATGCATTGCCACTGTGAACACTAAAGG----TGACTATTC--AG--AGAGAGGGCAACAGGAAGATAAGCTGTTTGAa-----ttcattcaacaaccatttt i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5704701 302 - 180051392 TTGGTTTGAATAAGGTTAGAAAGTTACCTGGGGAGGCAGC-TACATCTATGTGAAGTGACATCTGGATTCTGTTCTTTC-AGGTCAAGGAAAACAATTATCGGGGACATGGGGATAGTGTGGACCAGCTTTGTTGGCATCCAAGTAATCCTGACCTATTCGTTACCGCGTCCGGAGATAAAACCATTCGCATCTGGGATGTCAGGACTACAAAATGCATTGCCACTGTGAACACTAAAGG----TGACTATTC--AGAGAGAGAGGGTAATAGGAAGATAAGCTGTTTGAa-----ttcattcaacaaccatttt i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5896495 302 - 181584905 TTGGTTTGAATAAGGTTAGAAAGTTACCTGGGGAGGCAGC-TACATCTATGTGAAGTGACATCTGGATTCTGTTCTTTC-AGGTCAAGGAAAACAATTATCGGGGACATGGGGATAGTGTGGACCAGCTTTGTTGGCATCCAAGTAATCCTGACCTATTCGTTACCGCGTCCGGAGATAAAACCATTCGCATCTGGGATGTCAGGACTACAAAATGCATTGCCACTGTGAACACTAAAGG----TGACTATTC--AGAGAGAGAGGGTAATAGGAAGATAAGCTGTTTGAa-----ttcattcaacaaccatttt i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 925568 302 - 16193990 TTGGTTTGAATAAGGTTAGCAAGTTACATGGGGAGGCAGC-TACATCTATGTGAAGTGACATCTGGATTCTGTTCTTTC-AGGTCAAGGAAAACAATTATCGGGGACATGGGGATAGTGTGGACCAGCTTTGTTGGCATCCAAGTAATCCTGACCTATTCGTTACCGCGTCCGGAGATAAAACCATTCGCATCTGGGATGTCAGGACTACAAAATGCATTGCCACTGTGAACACTAAAGG----TGACTATTC--AGAGAGAGAGGGTAATAGGAAGATAAGCTGTTTGAa-----ttcattcaacaaccatttt i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1742562 303 - 21434487 TTGGTTTGAATAAGGTTAGAAAGTTACATGGGGAGGCAGCTTACATCTATGTGAAGTGACATCTGGATTCTGTTCTTTC-AGGTCAAGGAAAACAATTATCGGGGACATGGGGATAGTGTGGACCAGCTTTGTTGGCATCCAAGTAATCCTGACCTATTCGTTACCGCGTCCGGAGATAAAACCATTCGCATCTGGGATGTCAGGACTACAAAATGCATTGCCACTGTGAACACTAAAGG----TGACTATTC--AGAGAGAGAGGGTAATAGGAAGATAAGCTGTTTGAa-----ttcattcaacaaccatttt i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4711454 302 - 82825804 TTGGTTTGAATAAGGTTAGAAAGTTACTTGGGGAGGCAGC-TACATCTATGTGAAGTGACATCTGGATTCTGTTCTTTC-AGGTCAAGGAAAACAATTATCGGGGACATGGGGATAGTGTGGACCAGCTTTGTTGGCATCCAAGTAATCCTGACCTATTCGTTACCGCGTCCGGAGATAAAACCATTCGCATCTGGGATGTCAGGACTACAAAATGCATTGCCACTGTGAACACTAAAGG----TGACTATTC--AGAGAGAGAGGGTAATAGGAAGATAAGCTGTTTGAa-----ttcattcaacaaccatttt i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 206710 302 + 2521317 TTGGTTTGAATAAGGTTAGAAAGTTACATGGGGAGGCAGC-TACATCTATGTGAAGTGACATCTGGATTCTGTTCTTTC-AGGTCAAGGAAAACAATTATCGGGGACATGGGGATAGTGTGGACCAGCTTTGTTGGCATCCAAGTAATCCTGACCTATTCGTTACCGCGTCCGGAGATAAAACCATTCGCATCTGGGATGTCAGGACTACAAAATGCATTGCCACTGTGAACACTAAAGG----TGACTATTC--AGAGAGAGAGGGTAATAGGAAGATAAGCTGTTTGAa-----ttcattcaacaaccatttt i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1697903 305 - 2415367 TTGGTTTGAATAAGGTTAGAAAGTTACAT-GGGAGGCAGC-TACATCTGTGTGAAGTGACATCTGGATTCTGTTCTTTC-AGGTCAAAGAAAACAATTATCGGGGACATGGGGATAGTGTGGACCAGCTTTGTTGGCATCCAAGTAATCCTGACCTATTCGTTACTGCATCTGGAGATAAAACCATTCGCATCTGGGATGTCAGGACTACAAAATGCATTGCCACTGTGAACACTAAAGGTGACTGACTATTC--AGATAGAGAGGGTAATAGGAAGATAAGCTGTTTGAa-----ttcattcaacaaccatttt i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142768487 301 - 204313951 TTGGTTTGAAAAAGGTTAAAAAGTTACATGGAGAGGCAGC-TACATCTATGTAAAGTGACATCTTGATTCTGTTTTTTC-AGGTCAAAGAAAATAATTATCGGGGACATGGAGATAGTGTGGACCAGCTTTGTTGGCATCCAAGTAATCCTGACCTATTTGTTACGGCATCTGGAGATAAAACCATTCGCATCTGGGATGTGAGGACTACAAAATGCATTGCCACTGTGAACACTAAAGG----TGACTATTC--AGAGAGAGAGGGTAATAGGAAGATAA-CTGCTTGTC-----ttcattcagcaaccatttt i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2166996 301 + 10068113 TTGGTTTGAATAAAGTTAAAAAGTTACATGGGGAGGCAGC-TACATCTATGTGAAGTGACATCTGGATTCTGTTCTTTC-AGGTCAAAGAAAATAATTATCGGGGACATGGAGATAGTGTGGACCAGCTTTGCTGGCATCCAAGTAATCCTGACCTATTTGTTACGGCATCTGGAGATAAAACTATTCGCATCTGGGATGTGAGGACTACAAAATGCATTGCCACTGTGAACACTAAAGG----TGACTATTC--AGAGAGAGAGGGTAACAGGAAGAGAA-CTGCTTGTA-----TTCATTCAGCAACCATTTT i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 23223 290 - 709587 TTTGTTTGAATAAGGTTAAAAAGTTACATGGGGAGGCAGC-TACATCTATGTGAAGTGACATCTGGATGCTGTTCTTTC-AGGTCAAAGAAAATAATTATCGGGGACATGGAGATAGTGTGGACCAGCTTTGTTGGCATCCAAGTAATCCTGACCTATTTGTTACGGCATCTGGAGATAAAACTATTCGCATCTGGGATGTGAGGACTACAAAATGCATCGCCACTGTGAACACTAAAGG----TGACTATTC--AGAGAGAGAGGGTAATAGGAAGATAA-TTGCTTGTA-----TTCATTCA----------- i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1104071 303 - 2246441 TTGGTTTGAATAAGGTTAAAAAGTTACATGAGGAGGCAGC-TTCATCTATGTGAAGTGACATCTGGATTCTGTTCTTTC-AGGTCAAAGAAAATAATTATCGGGGACATGGAGATAGTGTGGACCAGCTTTGTTGGCATCCAAGTAATCCTGACCTATTTGTTACGGCATCTGGAGATAAAACCATTCGCATCTGGGATGTGAGGACTACAAAATGCATTGCCACTGTGAACACTAAAGG----TGACTATTCAGAGAGAGAGAGGGTAATAGGAAGATAA-CTGCTTGTa-----ttcattcagcaaccatgtt i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 695778 299 - 940639 TTGGTTTGAGTAAAATTAAAAAGTTACATGTGAAGGCAGG-TAAATCTGTGTGAAATGACATCTGGATTCTGTTCTTTC-AGGTCAAAGAAAACAATTACCGGGGACATGGGGATAGCGTGGACCAGCTTTGTTGGCATCCAAGTAATCCTGACCTCTTTGTCACTGCGTCTGGAGATAAAACCATTCGCATCTGGGATGTGAGGACTACCAAATGCATTGCCACTGTGAACACTAAAGG----TGACTATTC--AG--AGAGAGGGCAGTAGGAAGACAAGCTGCTTGTA-----TTTGtt-aacaaccatttg i proCoq1.NW_012152163v1 I 117 C 0 s otoGar3.GL873522 1195168 299 + 48283576 TTGTTTTGAATAAAGTTGAAAAGTTACATGTGAAGGCAGG-TACATCTGTGTGAAGTGACATTTGGACTTTGTT-TTTC-AGGCCAAAGAAAACAATTATCGGGGACATGGGGATAGTGTGGACCAGCTTTGTTGGCATCCAAGTAATCCCGACCTTTTTGTCACTGCATCTGGAGATAAAACCATTCGCATCTGGGATGTGAGGACTACCAAATGCATTGCCACTGTGAACACTAAAGG----TGACTGTTC--AG--AGAGAGGGCAGTGGGAAGATGAACTACTTTTA-----TTTATTCAACAACCGTTTG i otoGar3.GL873522 C 0 C 0 s mm10.chr13 65953615 259 - 120421639 ACTGTTTGGATAA----------------------------------------AAGTGGCATCTGGATTCTGTTCTTTTAAGGTCAAAGAAAACAACTACCGGGGCCACGGAGATAGTGTGGACCAGCTTTGTTGGCACCCAAGCAACCCTGACCTCTTTGTCACCGCATCTGGAGATAAAACCATTCGCATCTGGGATGTGAGGACTACAAAATGCATCGCCACTGTGAATACGAAAGG----TGA--GTTC--AGAGAGAGGGGGTTCT-GGAGGAAAAGCTAGTGTGA-----TC--TGCAGCAAGCATCTT i mm10.chr13 C 0 I 1192 s canFam3.chr4 37131950 305 + 88276631 TTGGTTTAAATAAAGCTGAGAAGTTACATGTGGAGGCAGG-TACTTAAGTGTAAGGTGACATGTGGATTCTGTTCTTTC-AGGTCAAAGAAAACAATTATCGGGGACATGGGGATAGTGTGGACCAGCTTTGTTGGCATCCAAGTAATCCTGACCTCTTTGTCACCGCATCGGGAGACAAAACCATTCGCATCTGGGACGTGAGGACTACAAAATGCATTGCCACCGTGAACACTAAAGG----TGACTCTTC--AG--AGAGAGGGCAATAGGAAGATGAGCTACTTTTAGTAATttaattcaacaagcatttc i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 213521 294 - 960158 GTGGTTTGAATAAGGTT---AAGTTATATATGGAGGCATG-TACATCTGTGTGAAGTGACATCTAAATTCTTTTCTTTC-AGGTCAAAGAAAACAATTATCGGGGACATGGGGATAGTGTGGACCAACTTTGTTGGCATCCAAGTAATCCTGACCTCTTTGTTACTGCGTCCGGAGATAAAACCATTCGCATTTGGGATGTGAGGACTACGAAGTGCATTGCCACTGTGAATACTAAAGG----TGACTATTG------AAAGAGGACTGTAGGATGATAAGCTACtttaa------tcattcaacaagtgttta i dasNov3.JH562710 C 0 C 0 a score=289896.000000 s hg38.chr5_KI270795v1_alt 11287 24 + 131892 ccgaatatcttttctgtgcctggc s panTro5.chr5 5259943 24 - 181907262 ccgaatatcttttctgtgcctggc i panTro5.chr5 C 0 C 0 s panPan2.chr5 5522337 24 - 183735486 ccgaatatcttttctgtgcctggc i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1619894 24 + 3967317 ccgaatatcttttctgtgcctggc i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4471560 24 + 163208435 ccgaatatcttttctgtgcctggc i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5705003 24 - 180051392 ccgaatatcttttctgtgcctggc i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5896797 24 - 181584905 ccgaatatcttttctgtgcctggc i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 925870 24 - 16193990 ccgaatatcttttctgtgcctggc i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1742865 24 - 21434487 ccgaatatcttttctgtgcctggc i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4711756 24 - 82825804 ccgaatatcttttctgtgcctggc i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 207012 24 + 2521317 ccgaatatcttttctgtgcctggc i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1698208 24 - 2415367 ccgaatatcttttctgtgtctggc i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142768788 24 - 204313951 ctgaatgtcttttctgtgcctagt i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2167297 24 + 10068113 CTGAATGTCTTTTCTGTGCCTAGT i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 23513 4 - 709587 --------------------TAGT i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1104374 24 - 2246441 ctgaatgtcttttctgtgcctagt i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 696077 24 - 940639 ctgaatatcttctctgttcctggc i proCoq1.NW_012152163v1 C 0 C 0 s otoGar3.GL873522 1195467 23 + 48283576 TTGAATATCTTCTCTGTTCCCTA- i otoGar3.GL873522 C 0 C 0 s canFam3.chr4 37132255 24 + 88276631 ctgaatatcttctctgtgtttcgc i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 213815 21 - 960158 ctgaatatctt---ggttcctggc i dasNov3.JH562710 C 0 I 540 e mm10.chr13 65953874 1192 - 120421639 I a score=129396.000000 s hg38.chr5_KI270795v1_alt 11311 13 + 131892 actcagctgtgta s panTro5.chr5 5259967 13 - 181907262 actcagctgtgta i panTro5.chr5 C 0 C 0 s panPan2.chr5 5522361 13 - 183735486 actcagctgtgta i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1619918 13 + 3967317 actcagctgtgta i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4471584 13 + 163208435 actcagctgtgta i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5705027 13 - 180051392 actcagcagtgta i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5896821 13 - 181584905 actcagcagtgta i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 925894 13 - 16193990 actcagcagtgta i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1742889 13 - 21434487 actcagcagtgta i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4711780 13 - 82825804 actcagcagtgta i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 207036 13 + 2521317 actcagcagtgta i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1698232 13 - 2415367 actcagctgtgta i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142768812 13 - 204313951 actctgctgtgta i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2167321 13 + 10068113 ACTCTGCTGTGTA i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 23517 13 - 709587 ACTCCGCTGTGTA i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1104398 13 - 2246441 actcggctgtgta i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 696101 13 - 940639 actctgctaggta i proCoq1.NW_012152163v1 C 0 C 0 s otoGar3.GL873522 1195490 6 + 48283576 -------TCGCCA i otoGar3.GL873522 C 0 C 0 s canFam3.chr4 37132279 13 + 88276631 cctgtgttaggta i canFam3.chr4 C 0 C 0 e mm10.chr13 65953874 1192 - 120421639 I e dasNov3.JH562710 213836 540 - 960158 I a score=361323.000000 s hg38.chr5_KI270795v1_alt 11324 27 + 131892 tgagacatcctga-----gctgaata--agagtt s panTro5.chr5 5259980 27 - 181907262 tgagacatcctga-----gctgaata--agcgtt i panTro5.chr5 C 0 C 0 s panPan2.chr5 5522374 27 - 183735486 tgagacatcctga-----gctgaata--agcgtt i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1619931 27 + 3967317 tgagacatcctga-----gctgaata--agagtt i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4471597 27 + 163208435 tgagacatcctga-----gctgaata--agagtt i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5705040 27 - 180051392 tgagacatcctga-----ggtgaata--agagtt i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5896834 27 - 181584905 tgagacatcctga-----ggtgaata--agagtt i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 925907 27 - 16193990 tgagacatcctga-----gctgaata--agagtt i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1742902 27 - 21434487 tgagacatcctga-----gctgaata--agagtt i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4711793 27 - 82825804 tgagacatcctga-----gctgaata--agagtt i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 207049 27 + 2521317 tgagacatcctga-----gctgaata--agagtt i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1698245 27 - 2415367 tgagacatcctga-----gctgaata--agagtt i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142768825 27 - 204313951 tgtgacattctga-----gctgaata--agagtt i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2167334 27 + 10068113 TGTGACATTCTGA-----GCTGAATA--AGAGTT i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 23530 27 - 709587 TGTGACATTCTGA-----GCTGAATA--AGAGTT i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1104411 27 - 2246441 tgtgacattctga-----gctgaata--agagtt i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 696114 27 - 940639 tgagacatcctga-----gctgaata--agagtt i proCoq1.NW_012152163v1 C 0 C 0 s otoGar3.GL873522 1195496 33 + 48283576 CAAAAAATTTAGAAATTTGCCAAGTGC-AGAGTT i otoGar3.GL873522 C 0 I 258 s canFam3.chr4 37132292 29 + 88276631 tgggacatcctgg-----gctgaatatgacaatc i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 214376 25 - 960158 tgggacatcctga-----gctgaata--agac-- i dasNov3.JH562710 I 540 C 0 e mm10.chr13 65953874 1192 - 120421639 I a score=3213091.000000 s hg38.chr5_KI270795v1_alt 11351 292 + 131892 tccagctccaaggacctc-----ccctgcggg-g---ag---aagac----atatatatacaaa---taacatagcaagatatggttcattttataatggagaggtctgcaaggtggatacccagaatagaaatgaaaacaaaagtctgcctaggggagccagggaaggcctcaccaaatttgagcaaacttttagggtagcc-ataggagttga--gtggt-cagggtgctgtgggtgggga----atgg------gacatttccaggagggaacagcatgtgcaaaggcatggagAATTTGGAAAA-TT-CTGATGAGTTAGAAT s panTro5.chr5 5260007 292 - 181907262 tccagctccaaggacctc-----ccctgcggg-g---gg---aagac----atatatttacaaa---taacatagcaagatatggttcattttataatggagaggtctgcaaggtggatacccagaatagaaatgaaaacaaaagtctgcctaggggagccagggaaggcctcaccaaatttgagcaaacttttagggtagcc-ataggaattga--gtggt-cagggtgctgtgggtgggga----atgg------ggcatttccaggagggaacagcatgtgcaaaggcatggagAATTTGGAAAA-TT-CTGATGAGTTAGAAT i panTro5.chr5 C 0 C 0 s panPan2.chr5 5522401 292 - 183735486 tccagctccaaggacctc-----ccctacggg-g---gg---aagac----atatatttacaaa---taacatagcaagatatggttcattttataatggagaggtctgcaaggtggatacccagaatagaaatgaaaacaaaagtctgcctaggggagccagggaaggcctcaccaaatttgagcaaacttttagggtagcc-ataggaattga--gtggt-cagggtgctgtgggtgggga----atgg------ggcatttccaggagggaacagcatgtgcaaaggcatggagAATTTGGAAAA-TT-CTGATGAGTTAGAAT i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1619958 291 + 3967317 tccagctccaaggacctc-----ccctgcggg-g---ag---aagac----atatatatacaaa---taacatagcaagatctggttcattttataatggagaggtctgcaaggtggatacccagaatagaaatgaaaacaaaagtctgcctaggggagccagggaaggccgcaccaaacttgagcaaacttttagcgtagac-ataggaattga--gtggt-cagggtgctgtgggtgggga----atgg------ggcatttccagga-ggaacagcatgtgcaaaggcgtggagAATTTGGAAAA-TT-CTGATGAGTTAGAAT i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4471624 296 + 163208435 tccagctccaaggacctc-----ccctgcggg-g---ag---aagacatatatatatatacaaa---taacatagcaagatatggttcattttataatggagaggtctgcaaggtggaaacccagaatagaaatgaaaacaaaagtctgcctaggggagccagggaaggcctcaccaaatttgagcaaacttttagggtagcc-ataggaattga--gtggt-cagggtgcagtgggtgggga----atgg------ggcatttccaggagggaacagcatgtgcaaaggcatggagAATTTGGAAAA-TT-CTGATGAGTTAGAAT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5705067 294 - 180051392 tccagctccaaggacctc-----cccagcggg-g---ag---gggac----atgtatatacaaa---taacatagcaaggtatggttcatttaataatggagaggtctgcaagatggatacccagaatagaagtgaaaacaaaagtctgcctaggggagccagggaaggcctcaccaaatttgagcaaacttttaggatagcc-atagaaattgagtgtggt-caatgtgcagtgggtgggga----atgg------ggcatttccaggagggaacagcgtgtgcaaaggcATGGAGAATGTGGAAAA-TT-CTGATTAGTTAGAAT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5896861 294 - 181584905 tccagctccaaggacctc-----cccagcggg-g---ag---gggac----atgtatatacaaa---taacatagcaaggtatggttcatttaataatggagaggtctgcaagatggatacccagaatagaagtgaaaacaaaagtctgcctaggggagccagggaaggcctcaccaaatttgagcaaacttttaggatagcc-atagaaattgagtgtggt-caatgtgcagtgggtgggga----atgg------ggcatttccaggagggaacagcgtgtgcaaaggcATGGAGAATGTGGAAAA-TT-CTGATTAGTTAGAAT i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 925934 294 - 16193990 tccagctccaaggacctc-----cccagcggg-g---ag---gcgac----atgtatatacaaa---taacatagcaaggtatggttcatttaataatggagaggtctgcaagatggatacccagaatagaagtgaaaacaaaagtctgcctaggggagccagggaaggcctcaccaaatttgagcaaacttttaggatagcc-atagaaattgagtgtggt-caatgtgcagtgggtgggga----atgg------ggcatttccaggagggaacagcgtgtgcaaaggcatggagaatgtggaaaA-TT-CCGATTAGTTAGAAT i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1742929 294 - 21434487 tccagctccaaggacctc-----cccagcggg-g---ag---gggac----atgtatatacaaa---taacatagcaagatatggttcatttgataatggagaggtctgcaagatggatacacagaatagaagtgaaaacaaaagtctgcctaggggagccagggaaggcctcaccaaatttgagcaaacttttaggatagcc-atagaaattgagtgtggt-caatgtgcagtgggtgggga----atgg------ggcatttccaggagggaacagcgtgtgcaaaggcatggagAATGTGGAAAA-TT-CTGATTAGTTAGAAT i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4711820 293 - 82825804 tccagctccaaggacctc-----cccagcggg-g---ag---ggg-c----atgtatatacaaa---taacatagcaaggtatggttcatttgataatggagaggtctgcaagatggatacccagaatagaagtgaaaacgaaagtctgcctaggggagccagggaaggcctcaccaaatttgagcaaacttttaggatagcc-atagaaattgagtgtggt-caaggtgcagtgggtgggga----atgg------ggcatttccaggagggaacagcgtgtgcaaaggcatggagAATGTGGAAAA-TT-CTGATTAGTTAGAAT i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 207076 294 + 2521317 tccagctccaaggacctc-----cccagcggg-g---ag---gggac----atgtatatacaaa---taacatagcaagatatggttcatttgataatggagaggtctgcaagatggatacacagaatagaagtgaaaacagaagtctgcctaggggagccagggaaggcctcaccaaatttgagcaaacttttaggatagcc-atagagattgagtgtggt-caatgtgcagtgggtgggga----atgg------ggcatttccaggagggaacagcgtgtgcaaaggcatggagAATGTGGAAAA-TT-CTGATTAGTTAGAAT i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1698272 292 - 2415367 tccaggtccaaggaactc-----cccagcggg-g---ag---gggac----atgtatatacaaa---taacatagcaagatatggttcttttaataatggagaggtctgcaagatggatacccagaatagaaatgaaaacagaagtctgcctaggggagccagggaaggcctcaccaaatttgagcaaacttttaggatagcc-atagaaattga--gtggt-caaggtgcagtgggtgggga----atgg------ggcatttccaggagggaacagcatgtgcaaaggcATGGAGAATATGGAAAA-TT-CTGATTAGTTAGAAT i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142768852 271 - 204313951 tccatctccaaggacttc-----ccctgcaggga---ga---gagac----acatatatatata---aaacata---------------ttttataatggagaggtctgcgaggtggatacccagaatagaaatgaaaacaaacgtctgcctaagggagtcagggaagggctcaccaaatttgagcaaactcttaggatagcc-ataggaattta--gtggt-ctgggtgtagtgggtgagta----atgg------ggc-------ggagggaacagaatgtgcagagacATAGAGAATTTGGAAAA-TT-CTGATGAGTTAGAAT i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2167361 254 + 10068113 ------TCCAAGGACTTC-----CCCTGGAGG---------------------ATATATATATA---TGACGTA---------------TTTTATAATGGAGAGGTCTGCAAGGTGGATACCCAGAATAGAAATGAAAACAAACGTCTGCCTAGGGAAGCCAGGGAAGGGCTCACCAAATTTGAGCAAACTCTTAGGCTAGCC-ATAGGAATTTA--GTGGT-TTGGGTGCAGTGGGTGAGTA----ATGG------ggc-------agagggcacagcatgtgcagaggcatggagAATTTGGAAAA-TT-CTAATGAGTTAGAAT i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 23557 270 - 709587 TCCATCTCCAAGGACTTC-----CCCTGCAGG-A---GA---GAGAC----ATATATATATAAA---TAACGTA---------------TTTTATAATGGAGAGGTCTGCAAGGTAGATACCCAGAATAGAAATGAAAACAAACATCTGCCTAGGGGAGCCAGGGAAGGGCTCACCAAATTTGAGCAAACTCTTAGGATAGCC-ATAGGAATTTA--GTGGT-CTGTGTGCAGTGGGTGAGTA----ATGG------GGC-------GGAGGGCACATCCCGTGCAGAGGCATGTAGAATTTGGAAAA-TC-CTGATGAGTTAGAAT i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1104438 273 - 2246441 tccatctccaaggatttc-----ccgtgcaggga---ga---gagac--atatatatatataaa---taatata---------------ttttataatggagaggtctgcaaggtggatacccagaatagaaatgaaaacaaacgtctgcctaggggaaccagggaagggctgaccaaatttgagcaaactcttaggatagcc-atagaaattta--gtggt-ctgggtgcaggggatgagta----atgg------ggc-------ggagggcacagcatgtgcagaggcATGGAGAATTTGGAAAA-TT-CTGTTGAGTTAGAAT i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 696141 295 - 940639 tccagctccaaggacctcatggtccttgtgtg-ggaaga---gagac----ataggtgtaaaaa---tgacataacaagacatggttcatcttacagtggagatgtctgc-aggtggatacccagaatagaagtgtcaac----gtctgtctcggggagacagggaaagcctcacaaaatttgagcaaactcttaggatagcc-gtaggaattta--gtggt-cagggtgcagtgggtgagga----gtgt------ggcagttcttggagggaacaacatatgcaaaggcatggagaatttgggaaa-tt-ccggtaggttagaat i proCoq1.NW_012152163v1 C 0 C 0 s canFam3.chr4 37132321 261 + 88276631 tccagctcctAGGGCCTA---------------A---A-------AC-----------------------CCTA-----ATATAGTTCATGTTACACTGGAGATGTCTACAAGATGGATATCTAGAATGGAAGTGCTTA-----GTCTGCCT-GTGGAGACAAGCAAGATCTCACAAAATTTGAGCAAACTCTTAGAATAGCTAATAGGGATTTA--GTGGTCCGGGGTCCAGTGGGTGAGTG----AGGAGTGAGCGGCAGCTCTAGGAGGGAGCTGCATGTGCAGATGTATGGAGAATTTGGGAAACTC-CTGCTAGGCTAGAAT i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 214401 302 - 960158 tccagctctaaggaccttatg--gcttgtgtg-a---agagagagac----atatgtgtagaaaaactagcataatataacatggttcttcttataataggaaggtctataaggtggctactgagaatagaaatg----cttaagtctgtctaggggagacaggaaaatcctgacagaatgggaacaaactcttagagtagcc-ataggaattta--gtgac-cagggtgtagtgggcaaggaagtcatgg------tggtgggttggaggagatcaacatgtgcaaaggcctggagaatttggaaaa-ctgcTTATAGTTTAGAAT i dasNov3.JH562710 C 0 C 0 e mm10.chr13 65953874 1192 - 120421639 I e otoGar3.GL873522 1195529 258 + 48283576 I a score=70143.000000 s hg38.chr5_KI270795v1_alt 11643 5 + 131892 GGTTG s panTro5.chr5 5260299 5 - 181907262 GGTTG i panTro5.chr5 C 0 C 0 s panPan2.chr5 5522693 5 - 183735486 GGTTG i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1620249 5 + 3967317 GGTTG i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4471920 5 + 163208435 GGTTG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5705361 5 - 180051392 GGTTG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5897155 5 - 181584905 GGTTG i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 926228 5 - 16193990 GGTTG i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1743223 5 - 21434487 GGTTG i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4712113 5 - 82825804 GGTTG i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 207370 5 + 2521317 GGTTG i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1698564 5 - 2415367 GCTTG i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142769123 5 - 204313951 GGTTG i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2167615 5 + 10068113 GGTTG i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 23827 5 - 709587 GGTGG i cebCap1.NW_016107999v1 C 0 I 17 s aotNan1.NW_018501968v1 1104711 5 - 2246441 GGTTG i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 696436 5 - 940639 gactg i proCoq1.NW_012152163v1 C 0 C 0 s otoGar3.GL873522 1195787 5 + 48283576 GGCTA i otoGar3.GL873522 I 258 C 0 s canFam3.chr4 37132582 5 + 88276631 GGCTG i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 214703 5 - 960158 GGTTA i dasNov3.JH562710 C 0 C 0 e mm10.chr13 65953874 1192 - 120421639 I a score=43508.000000 s hg38.chr5_KI270795v1_alt 11648 4 + 131892 AAAC s panTro5.chr5 5260304 4 - 181907262 AAAC i panTro5.chr5 C 0 C 0 s panPan2.chr5 5522698 4 - 183735486 AAAC i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1620254 4 + 3967317 AAAC i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4471925 4 + 163208435 AAAC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5705366 4 - 180051392 AAAT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5897160 4 - 181584905 AAAT i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 926233 4 - 16193990 AAAT i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1743228 4 - 21434487 AAAT i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4712118 4 - 82825804 AAAC i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 207375 4 + 2521317 AAAT i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1698569 4 - 2415367 AAAC i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142769128 4 - 204313951 AAAC i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2167620 4 + 10068113 AAAC i saiBol1.JH378186 C 0 C 0 s aotNan1.NW_018501968v1 1104716 4 - 2246441 AAAC i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 696441 4 - 940639 aaac i proCoq1.NW_012152163v1 C 0 I 491 s otoGar3.GL873522 1195792 4 + 48283576 AAGT i otoGar3.GL873522 C 0 C 0 s canFam3.chr4 37132587 2 + 88276631 --AT i canFam3.chr4 C 0 I 6 s dasNov3.JH562710 214708 4 - 960158 AAGT i dasNov3.JH562710 C 0 C 0 e cebCap1.NW_016107999v1 23832 17 - 709587 I e mm10.chr13 65953874 1192 - 120421639 I a score=209434.000000 s hg38.chr5_KI270795v1_alt 11652 23 + 131892 TTGGATGGTCTTGGTGATCTGGG s panTro5.chr5 5260308 23 - 181907262 TTGGATGGTCTTGGTGATCTGGG i panTro5.chr5 C 0 C 0 s panPan2.chr5 5522702 23 - 183735486 TTGGATGGTCTTGGTGATCTGGG i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1620258 23 + 3967317 TTGGATGGTCTTGGTGATCTGGG i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4471929 23 + 163208435 TTGGATGGTCTTGGTGATCTGGG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5705370 23 - 180051392 TTGGATGGTCTTGGTGAACTGCG i rheMac8.chr6 C 0 I 11 s macFas5.chr6 5897164 23 - 181584905 TTGGATGGTCTTGGTGAACTGCG i macFas5.chr6 C 0 I 11 s macNem1.NW_012018466v1 926237 23 - 16193990 TTGGATGGTCTTGGTGAACTGCG i macNem1.NW_012018466v1 C 0 I 11 s cerAty1.NW_012007035v1 1743232 23 - 21434487 TTGGATGGTCTTGGTGAACTGCG i cerAty1.NW_012007035v1 C 0 I 11 s chlSab2.chr23 4712122 23 - 82825804 TTGGATGGTATTGGTGAACTGCG i chlSab2.chr23 C 0 I 11 s manLeu1.NW_012103943v1 207379 23 + 2521317 TTGGATGGTCTTGGTGAACTGCG i manLeu1.NW_012103943v1 C 0 I 11 s colAng1.NW_012115755v1 1698573 23 - 2415367 TTGGATGGTCTTGGTGAACTGCG i colAng1.NW_012115755v1 C 0 I 11 s calJac3.chr2 142769132 18 - 204313951 CT-----GTCTTGGTGGTCTGGG i calJac3.chr2 C 0 I 11 s saiBol1.JH378186 2167624 18 + 10068113 CT-----GTCTTAGTGGTCTGGG i saiBol1.JH378186 C 0 I 11 s aotNan1.NW_018501968v1 1104720 18 - 2246441 CT-----GTCTTGGTGGTCTGGG i aotNan1.NW_018501968v1 C 0 I 11 s otoGar3.GL873522 1195796 23 + 48283576 CTCAATGGTCTTGGTAGTTTAGG i otoGar3.GL873522 C 0 I 11 s canFam3.chr4 37132595 23 + 88276631 ATGAATAGTTTTGGTGGTCTGGG i canFam3.chr4 I 6 C 0 s dasNov3.JH562710 214712 23 - 960158 TTGGATTGTCTTAGTGATCTGGG i dasNov3.JH562710 C 0 I 11 e cebCap1.NW_016107999v1 23832 17 - 709587 I e mm10.chr13 65953874 1192 - 120421639 I e proCoq1.NW_012152163v1 696445 491 - 940639 I a score=1408172.000000 s hg38.chr5_KI270795v1_alt 11675 131 + 131892 AGAAA-----------GTTGTGCAGTACATTTATAGGCTCTGT-------------------TGTAAGTATTGAGGCCG---gt-----attg--tatgggactc-tgagttttcattgatcgtaagatgttcc---------------attaggaaag-----aaagttggtaaataactgtgat-acaccc s panTro5.chr5 5260331 131 - 181907262 AGAAA-----------GTTGTGCAGTACATTTATAGGCTCTGT-------------------TGTAAGTATTGAGGCCG---GT-----ATTG--TATGGGACTC-TGAGTTTTCATTGATCGTAAGATGTTCC---------------ATTAGGAAAG-----AAAGTTAGTAAATAACTGTGAT-ACACCC i panTro5.chr5 C 0 C 0 s panPan2.chr5 5522725 131 - 183735486 AGAAA-----------GTTGTGCAGTACATTTATAGGCTCTGT-------------------TGTAAGTATTGAGGCCG---gt-----attg--tatgggactc-tgagttttcattgatcgtaagatgttcc---------------attaggaaag-----aaagttagtaaataactgtgat-acaccc i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1620281 131 + 3967317 AGAAA-----------GCTGTGCAGCACATTTATAGGCTCTGT-------------------TGTAAGTACTGAGGGCG---gt-----attg--tatgggactc-tgagttttcattgatcgtaagatgttcc---------------attaggaaag-----aaagttggtaaataactgtgat-acaccc i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4471952 131 + 163208435 AGAAA-----------GTTGTGCAGTACATTTATAGGCTCTGT-------------------TGTAAGTATTGAGGCCG---GT-----ATTG--TGTGGGACTC-TGAGTTTTCATTGATCATAAGatgttcc---------------attaggaaag-----aaagttggtaaataactgtgat-acaccc i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5705404 132 - 180051392 AGAAA-----------GTTGTGCGGTACATTTATAGGCTCTGT-------------------TGTAAGTATTGAGGCCG---GT-----ACTG--TATGGGAATCTTGAGTTTTCATTTATCATAAGatgttcc---------------attaggaaag-----aaagttggtaaataactgtgat-acaccc i rheMac8.chr6 I 11 C 0 s macFas5.chr6 5897198 132 - 181584905 AGAAA-----------GTTGTGCGGTACATTTATAGGCTCTGT-------------------TGTAAGTATTGAGGCCG---GT-----ACTG--TATGGGAATCTTGAGTTTTCATTTATCATAAGatgttcc---------------attaggaaag-----aaagttggtaaataactgtgat-acaccc i macFas5.chr6 I 11 C 0 s macNem1.NW_012018466v1 926271 132 - 16193990 AGAAA-----------GTTGTGCGGTACATTTATAGGCTCTGT-------------------TGTAAGTATTGAGGCCG---GT-----ACTG--TATGGGAATCTTGAGTTTTCATTTATCATAAGatgttcc---------------attaggaaag-----aaagttggtaaataactgtgat-acaccc i macNem1.NW_012018466v1 I 11 C 0 s cerAty1.NW_012007035v1 1743266 132 - 21434487 AGAAA-----------GTTGTGCGGTACATTTATAGGCTCTGT-------------------TGTAAGTATTGAGGCCG---GT-----ACTG--TATGGGACTCTTGAGTTTTCATTTATCATAAGatgttcc---------------attaggaaag-----aaagttggtaagtaactgtgat-acaccc i cerAty1.NW_012007035v1 I 11 C 0 s chlSab2.chr23 4712156 134 - 82825804 AGAAA-----------GTTGTGCGGTACATTTATAGGCTCTGT-------------------TGTAAGTGTTGAGGCCG---GT-----ACTGTATATGGGACTCTTGAGTTTTCATTTATCATAAGATGTTCC---------------ATTAGGAAAG-----AAAGTTGGTAAATAACTGTGAT-ACACCC i chlSab2.chr23 I 11 C 0 s manLeu1.NW_012103943v1 207413 132 + 2521317 AGAAA-----------GTTGTGCGGTACATTTATAGGCTCTGT-------------------TGTAAGTATTGAGGCCG---GT-----ACTG--TATGGGACTCTTGAGTTTTCATTTATCATAAGatgttcc---------------attaggaaag-----aaagttggtaaataactgtgat-acaccc i manLeu1.NW_012103943v1 I 11 C 0 s colAng1.NW_012115755v1 1698607 132 - 2415367 AGAAA-----------GTTGTGCAGTACATTTATAGGCTCAGT-------------------TGTAAGTATTGAGGCTG---GT-----ACTG--TATGGGACTCTTGAGTTTTCATTTATCATAAGatgttcc---------------attaggaaag-----aaagttggtaaataactgtgat-acaccc i colAng1.NW_012115755v1 I 11 C 0 s calJac3.chr2 142769161 130 - 204313951 GGAAA-----------GTTGTGCAGTACATTTATAGGCTCTGT-------------------TATAAGTGTTGAGGCCA---TT-----ATTG--TAT-GGACTC-TAAGGTTTCATTGATCATAAGGTACTCC---------------ATTAGGAAAG-----AAAGTTGGTAGATAACTGTGAT-GCACCC i calJac3.chr2 I 11 C 0 s saiBol1.JH378186 2167653 130 + 10068113 AGAAA-----------GTTGTGCAGTACATTTATAGGCTCTGT-------------------TATAAGTGTTGAGGCCA---Tt-----attg--tat-ggactc-taaggtttcattgatcataagatgcccc---------------attaggaaat-----aaagttggtaaataactgtgat-gcaccc i saiBol1.JH378186 I 11 C 0 s cebCap1.NW_016107999v1 23849 130 - 709587 AGAAA-----------GTTGTGCAGTACATTTATAGGCTCTGT-------------------TATAACTGTTGAGGCCA---Tt-----attg--tgt-ggactc-taaggtttcattgatcataagatgctcc---------------attaggaaag-----aaagttggtagataactgtgat-gcaccc i cebCap1.NW_016107999v1 I 17 C 0 s aotNan1.NW_018501968v1 1104749 130 - 2246441 AGAAA-----------GTTGTGCAGTACATTTATAGGCTCTGT-------------------TATAAGTGTTGAGGCCA---Tt-----atta--tat-ggactc-taaggtttcattgatcataagatgctcc---------------attaggaaag-----aaagttggtagataactgtgat-gcaccc i aotNan1.NW_018501968v1 I 11 C 0 s otoGar3.GL873522 1195830 117 + 48283576 AGAAA-----------GTTGTGCAGTACGTTTATAAGCTGTGT-------------------TCTTACCA-----GGTA---TT-----ATTT--TAT--AAATCTTGAGG--CCATGGTTT-----ATGTGTC---------------ATTAGAAAAG-----CAAATAGTCACAGAACCATGAT-ACATG- i otoGar3.GL873522 I 11 C 0 s canFam3.chr4 37132618 175 + 88276631 AGAAAATGACCTGGGGGTTGTGCAGTACATTTGTAGAATCTATTCTCTACCAGGTATTATCCTATAAACCTTGAGGCCACTTAt-----attt--tat-cgacta-----acgtcacagattataaggtgtaccgatgttttatgtgttgttaagaaaga----aaagtttctagataaccatgat-ccacca i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 214746 164 - 960158 AGAAA-----------GTTGTGCTGTATGCTTATAGGCTGTGTTCTTTACC-----------TGTGAACCTTGAGGCGA---TTTACTGattt--cac-tgactc-taagatgacattgattgtaagatgcaccaatattttatgtacaattaggaaagaaaataaagctgccaggtaaccatgataacacta i dasNov3.JH562710 I 11 C 0 e mm10.chr13 65953874 1192 - 120421639 I e proCoq1.NW_012152163v1 696445 491 - 940639 I a score=971398.000000 s hg38.chr5_KI270795v1_alt 11806 74 + 131892 aaaattttgaaatgctttctgatacattttaagat-acagtgtagatactaaaatgtgagaaaat-atgcgtttta s panTro5.chr5 5260462 74 - 181907262 AAAATTTTGAAATGCTTTCTGATACATTTTAAGAT-ACAGTATAGATACTAAAATGTGAGAAAAT-ATGCATTTTA i panTro5.chr5 C 0 C 0 s panPan2.chr5 5522856 74 - 183735486 aaaattttgaaatgctttctgatacattttaagat-acagtatagatactaaaatgtgagaaaat-atgcgtttta i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1620412 74 + 3967317 aaaattttgaaatgctttctgatacattttaagat-acagtgtagatactaaaatgtgagaaaat-atgcatttta i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4472083 74 + 163208435 aaaattttgaaatgctttctgatacattttaagat-acagtatagatactaaaatgtgagaaaat-atgcgtttta i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5705536 75 - 180051392 aaaattttgaaatgctttctgatacattttaagat-acagtatagatactaaaatgtgaaaaaattatacatttta i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5897330 75 - 181584905 aaaattttgaaatgctttctgatacattttaagat-acagtatagatactaaaatgtgaaaaaattatacatttta i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 926403 75 - 16193990 aaaattttgaaatgctttctgatacattttaagat-acagtatagatactaaaatgtgaaaaaattatacatttta i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1743398 75 - 21434487 aaaattttgaaatgctttctgatacattttaagat-acagtatagatactaaaatgtgaaaaaattgtacatttta i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4712290 75 - 82825804 AAAATTTTGAAATGCTTTCTGATACATTTTAAGAT-ACAGTATAGATACTAAAATGTGAAAAAATGATACATTTTA i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 207545 75 + 2521317 aaaattttgaaatgctttctgatacattttaagat-acagtatagatactaaaatgtgaaaaaattatacatttta i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1698739 75 - 2415367 aaaattttgaaatgctttctgatacaatttaagat-acagtatagatactaaaatgtgaaaaaattatgcatttta i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142769291 76 - 204313951 AAAATTTTGAAATGCTTCCTGATACATTTAAAGATAACAGTATagatattaaaatgtgaaaaaaatgtgcgtttta i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2167783 75 + 10068113 caaattttgaaatgcttcctgatacatttaaagat-gtagtatagatattaaaatgtgaaaaaaatacgcatttta i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 23979 74 - 709587 -aaattttgaaatgcttcctgatacatttaaagat-atagtatagatattaaaatgtgaaaaaaatacgtgcttta i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1104879 75 - 2246441 aaaattttgaaatgcttcctgatacgtttaaagat-atagtatagatattaaaatgtgaaaaaaatatgcgtttta i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 696936 75 - 940639 aaaattttgaaatgcatcctgatacattttaagat-gggtcgtagatactaaaatgtgaaaaaaatatgcatttta i proCoq1.NW_012152163v1 I 491 I 26 s otoGar3.GL873522 1195947 74 + 48283576 AAAATTTTGAAATGCATCCTGATACATTTTAAATT-GTGTCATAAATGCTAAAACGT-CAAAAAATAATCATTTTA i otoGar3.GL873522 C 0 I 1 s canFam3.chr4 37132793 74 + 88276631 aaacttttgagatgcatcttgatgcattttaagat-acgttgtaaagaattaagtgtgaaaatat-atgcatcata i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 214910 71 - 960158 aaaattctgggatacatcctgatgtattttaaggt----gcatagatagtaaaatttgaacaaat-aggtatctta i dasNov3.JH562710 C 0 C 0 e mm10.chr13 65953874 1192 - 120421639 I a score=335952.000000 s hg38.chr5_KI270795v1_alt 11880 28 + 131892 gaatggaAAAAGTTG---GTGAAATTTTTAA s panTro5.chr5 5260536 28 - 181907262 GAATGGAAAAAGTTG---GTGAGATTTTTAA i panTro5.chr5 C 0 C 0 s panPan2.chr5 5522930 28 - 183735486 gaatggaAAAAGTTG---GTGAGATTTTTAA i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1620486 28 + 3967317 gaatggaAAAAGTTG---GTGAGATTTTTAA i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4472157 28 + 163208435 gaatggaAAAAGTTG---GTGAGATTTTTAA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5705611 28 - 180051392 gaatggaAAAGGTTG---ATGAGATTTTTAA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5897405 28 - 181584905 gaatGGCAAAGGTTG---ATGAGATTTTTAA i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 926478 28 - 16193990 gaatggaAAAGGTTG---ATGAGATTTTTAA i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1743473 28 - 21434487 gaatggaGAAGGTTG---ATGAGATTTTTAA i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4712365 28 - 82825804 GAATGGAAAAGGTTG---ACGAGATTTTTAA i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 207620 28 + 2521317 gaatggaGAAGGTTG---ATGAGATTTTTAA i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1698814 28 - 2415367 gaatggaAAAAGTTG---ATGAGATTTTTAA i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142769367 28 - 204313951 gaatggaAAAAGTTG---ATGAGATTTTTAA i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2167858 28 + 10068113 gaatggaAAAAGTTG---ATGAGATTTTTAG i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 24053 28 - 709587 gaatggaAAAAGTTG---ATGAGATTTTTAG i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1104954 27 - 2246441 gaatgg-aAAAGTTG---ATGAGATTTTTAA i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1196022 25 + 48283576 GACT--ATAAAGTTG---ATGACATTTTTA- i otoGar3.GL873522 I 1 C 0 s canFam3.chr4 37132867 28 + 88276631 gaattgataaaGTTG---ATGAAATTTTTAA i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 214981 31 - 960158 gaataaatgaagtTGGCTATCAAGTTTTTAA i dasNov3.JH562710 C 0 C 0 e mm10.chr13 65953874 1192 - 120421639 I e proCoq1.NW_012152163v1 697011 26 - 940639 I a score=1477158.000000 s hg38.chr5_KI270795v1_alt 11908 107 + 131892 TTGATGTGTTCAGTGTGGGCCACTGGACTTTGTTGACAAGACTTATCTCTGGAGGCGGAATGGTGTGGT-TTTTCCCCAAgtatacagctgctgatccatgagtgatt s panTro5.chr5 5260564 107 - 181907262 TTGATGTGTTCAGTGTGGGCCACTGGACTTTGTTGACAAGACTTATCTCTGGAGGCggaatggtgtggt-ttttccccaagtatacagctgctgatccatgagtgatt i panTro5.chr5 C 0 C 0 s panPan2.chr5 5522958 107 - 183735486 TTGATGTGTTCAGTGTGGGCCACTGGACTTTGTTGACAAGACTTATCTCTGGAGGCggaatggtgtggt-ttttccccaagtatacagctgctgatccatgagtgatt i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1620514 106 + 3967317 TTG-TGTGTTCAGTGTGGGCCACTGGACTTTGTTGACAAGACTTATCTCTGGAGGCAGAATGGTGTGgt-ttttccccaagtatacagctgctgatccatgagtgatt i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4472185 107 + 163208435 TTGATGTGTTCAGTGTGGGCCACTGGACTTTGTTGACAAGACTTATCTCTGGAGGCAGAATGGCGTGGT-TCTTCCCCAAgtatacagctgctgatccatgagtgatt i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5705639 107 - 180051392 TTGATGTGTTCAGTGTGGGCCACTAGACTTTGTTGACAAGACTTACCTCTGGAGGCAGAATGGTGTGGT-TTTTCCCCAGgtatacagctgctgatccatgagtgatt i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5897433 107 - 181584905 TTGATGTGTTCAGTGTGGGCCACTAGACTTTGTTGACAAGACTTACCTCTGGAGGCAGAATGGTGTGGT-TTTTCCCCAGgtatacagctgctgatccatgagtgatt i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 926506 107 - 16193990 TTGATGTGTTCAGTGTGGGCCACTAGACTTTGTTGACAAGACTTACCTCTGGAGGCAGAATGGTGTGGT-TTTTCCCCAGgtatacagctgctgatccatgagtgatt i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1743501 107 - 21434487 TTGATGTGTTCAGTGTGGGCCACTAGACTTTGTTGACAAGACTTACCTCTGGAGGCAGAATGGTGTGGT-TTTTCCCCAGgtatacagctgctgatccatgagtgatt i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4712393 106 - 82825804 TTGATGTGTTCAGTGTGGGCCACTAGACTTTGTTGACAAGACTTGCCTCTGGAGGCAGAATGGTGTGG--TTTTCCCCAGgtatacagctgctgatccatgagtgatt i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 207648 107 + 2521317 TTGATGTGTTCAGTGTGGGCCACTAGACTTTGTTGACAAGACTTACCTCTGGAGGCAGAATGGTGTGGT-TTTTCCCCAGgtatacagctgctgatccatgagtgatt i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1698842 107 - 2415367 TTGATGTGTTCAGTGTGGGCCACTAGACTTTGTTGACAAGACTTACCTCTGGAGGCAGAATGGTGTAGT-TTTTCCCCAGgtatacagctgctgatccatgaatgatt i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142769395 103 - 204313951 TTGATGGGTTCAGTGTGGGCCACTGGACTTTGTTGACAAGA-----CACTGGAGGCAGAATGGTGCGGTGCTTTCCCCAGGTATACAGCTGCTGATGCATGCGTGATT i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2167886 100 + 10068113 TTGATGTGTTCAGTGTGGGCCACTGGACTTTGTTGACAAGA-----CACTGGAGGCAGAATGGT---GTGTTTTCCCCAAGTATACAGCTGCTGATGCATGAGTGATT i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 24081 103 - 709587 TTGATGTGTTCAGTGTGGGCCACTGGACTTTGTTGACAAGA-----CACTGGAGGCAGAATGGTGTGGTGTTTTCCCCAAGTATACAGCTGCTGATGCATGAGTGATT i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1104981 102 - 2246441 TTGATGTGTTCAGTGTGGGCCAC-GGACTTTGTTGACAAGA-----CACCGGAGGCAGAATGGTGTGGTGTTTTCCCCAAGTATACGGCTGCTGATGCATGAGTGATT i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 697037 108 - 940639 TTGATGTGTTCAGTGTGGGCTGCTGGACTTTGTTGACAAGACTTGTTCCTGGAGGCAGAATGATGTAGTGCTTTTCTCAAGTTCacaactggtgacacatgagtgatt i proCoq1.NW_012152163v1 I 26 C 0 s otoGar3.GL873522 1196047 108 + 48283576 TTCATGTGTTCTGTGTGGGCTACTGGACTTTGTTGACAAGACTTGTACCTGGAGGCAGAATGGTGTAGTGCTTTTGCCAGGTTTAAAactggtgatgcataagtgatt i otoGar3.GL873522 C 0 C 0 s canFam3.chr4 37132895 108 + 88276631 TCGATGTGTTCACTGTGGGCCATTGGGCTTTGTTGACAAGTCTTGTCTGTAGAGGTGGAATGTTACAGTGCTTTCTCCAAGTAGACAactggtgatgcatgaatgatt i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 215012 106 - 960158 TTGATGTGTTCA--ATCGGTCACTGGCCTTTGTTAACAAGACTTAAACTGGAAGGTGAAATGGTGTAGTGCTTTCCTGAAGTCTATAACTGGTGGTGCATGAATGATT i dasNov3.JH562710 C 0 I 199 e mm10.chr13 65953874 1192 - 120421639 I a score=663480.000000 s hg38.chr5_KI270795v1_alt 12015 64 + 131892 caggtgatgcgtgggtgaacattaaaaaccagttttgcaa----atatcttaatgtctactagaagaa s panTro5.chr5 5260671 64 - 181907262 caggtgatgcgtgggtgaacattaaaaaccagttttgcaa----atatcttaatgtctactagaagaa i panTro5.chr5 C 0 C 0 s panPan2.chr5 5523065 64 - 183735486 caggtgatgcgtgggtgaacattaaaaaccagttttgcaa----atatcttaatgtctactagaagaa i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1620620 64 + 3967317 caggtgatgcgtgggtgaacattaacaaccagttttgcag----atatcttaatgtctactagaagaa i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4472292 64 + 163208435 caggtgatgcatgggtgaacattaaaaaccagttttgcaa----atattttaatgtctactagaagaa i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5705746 64 - 180051392 caggtgatgtgtgggtgaacattaaaaaccagttttgcag----atattttaatgtctactagaagaa i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5897540 64 - 181584905 caggtgatgtgtgggtgaacattaaaaaccagttttgcag----atattttaatgtctactagaagaa i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 926613 64 - 16193990 caggtgatgtgtgggtgaacattaaaaaccagttttgcag----atattttaatgtctactagaagaa i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1743608 64 - 21434487 caggtgatgcctgggtgaacattaaaaaccagttttgcag----atattttaatgcctactagaagaa i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4712499 64 - 82825804 caggtgatgcctgggtgaacattaaaaaccagttttgcag----atattttaatgcctactagaagaa i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 207755 64 + 2521317 caggtgatgcctgggtgaacattaaaaaccagttttgcag----atattttaatgcctactagaagaa i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1698949 64 - 2415367 caggtgatgcctgggtgaacattaaaaaccagttttgcag----gtattttaatgtctactagaagaa i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142769498 54 - 204313951 CA----------GGGTGAACATTAAAAACCATttatgtaa----atattttaatgtctactagaagaa i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2167986 54 + 10068113 CA----------GGGTGAACATTAAAAACCATttatgtaa----atattttaatgtctactagaagaa i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 24184 54 - 709587 CA----------GGGTGAACATTAAAAACCATttatgtaa----atattttaatgtctactagaagaa i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1105083 53 - 2246441 CA----------GGGTGAACATT-AAAACCATTTATGTAA----ATATTTTAATGTCTACTAGAAGAA i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 697145 64 - 940639 taggtgatacgtgggtgaccattaaaagccagttaggtac----atattttaatgtctcctagaagaa i proCoq1.NW_012152163v1 C 0 I 284 s otoGar3.GL873522 1196155 59 + 48283576 tcggtgatacataggtgaacattaaaaaccagttatatatgtgaatattttaatgtttg--------- i otoGar3.GL873522 C 0 C 0 s canFam3.chr4 37133003 37 + 88276631 taggtggtatgtagatgaacattaaaagtcggctgtg------------------------------- i canFam3.chr4 C 0 C 0 e mm10.chr13 65953874 1192 - 120421639 I e dasNov3.JH562710 215118 199 - 960158 I a score=64708.000000 s hg38.chr5_KI270795v1_alt 12079 6 + 131892 ctagca s panTro5.chr5 5260735 6 - 181907262 ctagca i panTro5.chr5 C 0 C 0 s panPan2.chr5 5523129 6 - 183735486 ctagca i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1620684 6 + 3967317 ctagcg i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4472356 6 + 163208435 ctagct i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5705810 6 - 180051392 ctagct i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5897604 6 - 181584905 ctagct i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 926677 6 - 16193990 ctagct i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1743672 6 - 21434487 ctagct i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4712563 6 - 82825804 ctagct i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 207819 6 + 2521317 ctagct i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1699013 6 - 2415367 ctagct i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142769552 6 - 204313951 ctagct i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2168040 6 + 10068113 ctagct i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 24238 6 - 709587 ctagct i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1105136 6 - 2246441 CTAGCT i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1196214 6 + 48283576 ctagca i otoGar3.GL873522 C 0 I 38 e mm10.chr13 65953874 1192 - 120421639 I e canFam3.chr4 37133040 0 + 88276631 C e proCoq1.NW_012152163v1 697209 284 - 940639 I e dasNov3.JH562710 215118 199 - 960158 I a score=277822.000000 s hg38.chr5_KI270795v1_alt 12085 56 + 131892 catagaatttattattcagttgaagctaaatttattttatttttatttatttta-tt s panTro5.chr5 5260741 36 - 181907262 catagaatttattattcagttgaagctaaa--------------------ttta-tt i panTro5.chr5 C 0 C 0 s panPan2.chr5 5523135 36 - 183735486 catagaatttattattcagttgaagctaaa--------------------ttta-tt i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1620690 56 + 3967317 catagaatttattattcagttgaagctaaatttattttatttttatttatttta-tt i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4472362 56 + 163208435 catagaatttattattcagttgaagctaaatttactttatttttatttatttta-tt i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5705816 37 - 180051392 catagaatttattactcaattaaggctaaa--------------------tttattt i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5897610 37 - 181584905 catagaatttattactcaattaaggctaaa--------------------tttattt i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 926683 37 - 16193990 catagaatttattactcaattaaggctaaa--------------------tttattt i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1743678 37 - 21434487 catagaatttattactcaattaaagctaaa--------------------tttattt i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4712569 37 - 82825804 catagaatttattactcaattaaagctaaa--------------------tttattt i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 207825 37 + 2521317 catagaatttattactcaattaaagctaaa--------------------tttattt i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1699019 37 - 2415367 catagaatttattactcaattaaagctgaa--------------------tttattt i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142769558 37 - 204313951 catataatttattactcaattgaagctaaa--------------------tttattt i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2168046 37 + 10068113 catagaatttattactcagttgaagctaaa--------------------tttattt i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 24244 37 - 709587 catagaatttattactcagttgaagctaaa--------------------tttattt i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1105142 35 - 2246441 CATAGAATTTATTACTCAATTGAAGCTAG----------------------TTAttt i aotNan1.NW_018501968v1 C 0 C 0 s canFam3.chr4 37133040 13 + 88276631 -----tgtttatt--ttaat------------------------------------- i canFam3.chr4 C 0 I 49 e mm10.chr13 65953874 1192 - 120421639 I e otoGar3.GL873522 1196220 38 + 48283576 I e proCoq1.NW_012152163v1 697209 284 - 940639 I e dasNov3.JH562710 215118 199 - 960158 I a score=2587959.000000 s hg38.chr5_KI270795v1_alt 12141 284 + 131892 ttatttttatttttgagacagggtcttgccctgttacccaggatggagtacagtggcataatattggctccctgcagcctcca---cctgggctcaagccatcctcccacctcaacctcctgagtagctgggactacag-gcacatgccaccatgcc-tggctaattttttgtagagacgggttttgccatattgcccaggctgatcttgaactcctggactcaagtgatctgcctaccttggcctcccagagtgctggaattacaggcttgagcctccacagctggct s panTro5.chr5 5260777 282 - 181907262 ttatttttatttttgagacagggtcttgccctgttacccaggatggagtacagtggcacaatattggctccctgcagcctcca---cctgggctcaagccatcctcccacctcaacctcctgagtagctgggactacag-gcacatgccaccatgcc-tggctaattttttgtagagacgggttttgccatattgcccaggctgatcttgaactcctggactcaagtg--ctgcctaccttggcctcccaaagtgctggaattacaggcttgagcctccacagctggct i panTro5.chr5 C 0 C 0 s panPan2.chr5 5523171 282 - 183735486 ttatttttatttttgagacagggtcttgccctgttacccaggatggagtacagtggcacaatattggctccctgcagcctcca---cctgggctcaagccatcctcccacctcaacctcctgagtagctgggactacag-gcacatgccaccatgcc-tggctaattttttgtagagacgggttttgccatattgcccaggctgatcttgaactcctggactcaagtg--ctgcctaccttggcctcccaaagtgctggaattacaggcttgagcctccacagctggct i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1620746 284 + 3967317 ttatttttatttttgagacagggtcttgccctgttacccaggatggagtacagtggcacaatattggctccctgcagcctcca---cctgggctcaagccatcctcccacctcaacctcctgagtagctgggactacag-gcacatgccaccatgcc-tggctaattttttgtagagacgggttttgccatattgcccaggctgatcctgaactcctggactcaagtgatctgcctactttggcctcccaaagtgctggaattacaggcttgagcctccacagctggct i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4472418 284 + 163208435 ttatttttatttttgagacagggtcttgccctgttacccaggatggagtacagtggcacaatattggctccctgcagcctcca---cctgggctcaagccatcctcccacctcaacctcctgagtagctgggactacag-gcacatgccaccatgcc-tggctaattttttgtagagatgggttttgccatattgcccaggctgatcttgaactcctggactcaagtgatttgcctgccttggcctcccaaagtgctgggattacaggcttgagcctccacagctggct i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5705853 287 - 180051392 ttatttttatttttgagacagagtcttgccctgttacccaggatggagtacagtgacacagtattggctgtctgcagcctccacctcctgggctcaagccatcctcctacctcaacctcctgagtagctgggactacag-gcacatgccaccatgcc-tggctaattttttgtagagccgatttttgccattttgccgaggctgatcttgaactcctggactcaagtgatttgcacaccttggcttcccaaagtgctgggataacaggctggagccaccgcgcccggct i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5897647 287 - 181584905 ttatttttatttttgagacagagtcttgccctgttacccaggatggagtacagtgacacagtattggctgtctgcagcctccacctcctgggctcaagccatcctcctacctcaacctcctgagtagctgggactacag-gcacatgccaccatgcc-tggctaattttttgtagagccgatttttgccattttgccgaggctgatcttgaactcctggactcaagtgatttgcacaccttggcttcccaaagtgctgggataacaggctggagccaccgcgcccggct i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 926720 287 - 16193990 ttatttttatttttgagacagagtcttgccctgttacccaggatggagtacagtgacacagtattggctgtctgcagcctccacctcctgggctcaagccatcctcctacctcaacctcctgagtagctgggactacag-gcacatgccaccatgcc-tggctaattttttgtagagccgatttttgccattttgccgaggctgatcttgaactcctggactcaagtgatttgcacaccttggcttcccaaagtgctgggataacaggctggagccaccgcgcccggct i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1743715 285 - 21434487 ttatttttatttttgagac--agtcttgccctgttacccaggatggagtacagtgacacagtattggctgcctgcagcctccacctcctgggctcaagccatcctcctacctcaacctcctgagtagctgggactacag-gcacatgccaccatgcc-tggctaattttttgtagagccggtttttgccattttgcccaggctgatcttcaactcctggactcaagtgatttgcacaccttggcttcccaaagtgctgggataacaggctggagccaccgcgcccggct i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4712606 287 - 82825804 ttatttttatttttgagacagagtcttgccctgttacccaggatggagtacagtgacacagtattggctgcctgcagcctccacctcctgggctcaagccatcctcctaactcaacctcctgagtagctgggactacag-gcacatgccaccatgcc-tggctacttttttgtagagccggtttttgccattttgcccaggctgatcttgaactcctggactcaagtgatttgcacaccttggcttcccaaagtgctgggataacaggctggagccaccgcgcccggct i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 207862 287 + 2521317 ttatttttatttttgagacagagtcttgccctgttacccaggatggagtacagtgacacagtattggctgcctgcagcctccacctcctgggctcaagccatcctcctacctcaacctcctgagtagctgggactacag-gcacatgccaccatgcc-tggctaattttttgtagagccggtttttgccattttgcccaggctgatcttcaactcctggactcaagtgatttgcacaccttggcttcccaaagtgctgggataacaggctggagccaccgcgtccggct i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1699056 286 - 2415367 ttatttttatttttgagacagagtcttgccctgttacccaggatggagtacagtgacacaatattggctgcctgcagcctccacctcctgggctcaagccatcctcctacctcaacctcctgagtagctgggactacag-gcacatgccaccatgcc-tggctaattttctgtagagctggtttttgccattttgcccaggctgatcttgaactcctggactcaagtgatttacaca-cttggcttcccaaagtgctgggattacaggcttgagccactgtgcccggct i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142769595 282 - 204313951 tta-----atttttgaggcacggtcttgccctgttacccaggatggagtgcagtggtacaatcttgactgtctgcagcctccacctcctgggctaaagccatcctcctacttctacctcctgagtagcaggaactacag-gcacatgccaccacgcc-tgactaatttttagtagagacaggttttgtcatattggccaggctgatctggaactcctggactcaagtgatttgcttaccatggcctcccaaagtgctggtattataggcatgagcctccacacccagct i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2168083 283 + 10068113 tta-----atttttgaggcagggtcttgccctgttacccaggttggagtgcagtggcacaatcttggctctctgcagcctccacctcctggtctcaagccatcctcctacctctacctcctgagtagctgggactacagagcacatgccaccatgcc-tgactaatttttagtagagacaggttttgtcatattggccaggctgatcttgaactcctggactcaagtgatttgcctaccatggcctcccaaagtgctgggattacaggcatgagccaccacacccagct i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 24281 272 - 709587 tta-----atttttgaggcagg----------gttactcagcatggagtgcagtagcacaatcttggctctctgcagcctccacctcctgggctcaagccatcctcctaccactacctcctgagtagctgggactacag-gcacatgccaccacgcc-tgactaatttttagtagagagaggttttgtcatattggccaggctgatcttgaactcctgggctcaagtgatttgcctaccatggcctcccaaagtgctgggattacaggcatgagccaccacacccagtt i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1105177 267 - 2246441 t-------atttttga-gcaag-tcttgcct-gttacc--agacggagtgcagtggcacaatctgg---ttctgcagctt---actccttggctcaagccatcctcctgcctctgcctctgatgtgactgggact-cag-gca-atg-caccacgccttgactaatttttagtagagacaggttttgtcatattggccaggctgatcttgaactcctggactcaagtgatttgcctaccatggcctcccaaagtgcctgtattacaggcatgagccaccacacccagcT i aotNan1.NW_018501968v1 C 0 C 0 e mm10.chr13 65953874 1192 - 120421639 I e otoGar3.GL873522 1196220 38 + 48283576 I e canFam3.chr4 37133053 49 + 88276631 I e proCoq1.NW_012152163v1 697209 284 - 940639 I e dasNov3.JH562710 215118 199 - 960158 I a score=2023891.000000 s hg38.chr5_KI270795v1_alt 12425 181 + 131892 gctaaatttatttaagtaaa-cttttttgaatcaattttaagaaaaatcttgaataaagaaaagtata-gtgtttaa--tggataggacaaaaattgtgatgttggcatgcgaatggctggag-ttgagaaatgctggtgta--agagaaaagggggctttggggtc--aaatctgggtttaaaatcttg s panTro5.chr5 5261059 181 - 181907262 gctaaatttatttaagtaaa-cttttttgaatcaattttaagaaaaatcttgaataaagaaaagtata-gtgtttaa--tggataggacaaaaattgtgatgttggcatgtgaatggctggag-ttgagaaatgctggtgta--agagaaaagggggctttggggtc--aaatctgggtttaaagtcttg i panTro5.chr5 C 0 C 0 s panPan2.chr5 5523453 181 - 183735486 gctaaatttatttaagtaaa-cttttttgaatcaattttaagaaaaatcttgaataaagaaaagtata-gtgtttaa--tggataggacaaaaattgtgatgttggcatgtgaatggctggag-ttgagaaatgctggtgta--agagaaaagggggctttggggtc--aaatctgggtttaaagtcttg i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1621030 181 + 3967317 gctaaatttatttaagtaaa-cttttttgaatcaattttaagaaaaatcttgaataaagaaaagtaca-gtgtttaa--tggataggacaaaaattgtgatgttggcatgcgaatggctggag-ttgagaaatgctggtgta--agagaaaagggggctttggggtc--aaatctgggtttaaaatcttg i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4472702 181 + 163208435 gctaaatttatttaagtaaa-tttttttgaatcaattttaagaaaaatattgaataaagaaaagtaca-gtgtttaa--tggagaggacaaaaattgtgatgttggcatgcgaatggctagag-ttgagaaatgctggtgta--agagaaaagggggctttggggtc--aaatctgggtttaaaatcttg i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5706140 183 - 180051392 gctaaatttatttaagtaaa-attttttggatcaattttaagaaaaatcatgaataaagaaaaataca-gtgtttaa--tggacaggacaaaaattgtgatgttggcatgcgagtgactagag-ttgagaaatgctggtgta--agagaaaagggggctttggggtctaaaatctgggtttaaattcttg i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5897934 183 - 181584905 gctaaatttatttaagtaaa-attttttggatcaattttaagaaaaatcatgaataaagaaaaataca-gtgtttaa--tggacaggacaaaaattgtgatgttggcatgcgagtgactagag-ttgagaaatgctggtgta--agagaaaagggggctttggggtctaaaatctgggtttaaattcttg i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 927007 181 - 16193990 gctaaatttatttaagtaaa-attttttggatcaattttaagaaaaatcatgaataaagaaaaataca-gtgtttaa--tggacaggacgaaaattgtgatgttggcatgtgagtgactagag-ttgagaaatgctggtgta--agagaaaagggggctttggggtc--aaatctgggtttaaattcttg i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1744000 181 - 21434487 gctaaatttatttaagtaaa-attttttggatcaattttaagaaaaatcttgaataaagaaaaataca-gtgtttaa--tggaccggacaaaaattgtgatgttggcatgtgagtgactagag-ttgagaaatgctggtgta--agagaaaagggggctttggggtc--aaatctgggtttaaattcttg i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4712893 181 - 82825804 gctaaatttatttaagtaaa-atttttttgattaattttaagaaaaatcttgaataaagaaaaataca-gtgtgtaa--tggacaggacaaaaattgtgatgttggcatgcgagtgactagag-ttgagaaatgctggtgca--agaggaaagggggctttggggtc--aaatctgggtttaaattcttg i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 208149 181 + 2521317 gctaaatttatttaagtaaa-attttttggatcaattttaagaaaaatcttgaataaagaaaaataca-gtgtttaa--tggacaggacaaaaattgtgatgttggcatgtgagtgactagag-ttgagaaatgctggtgta--agagaaaagggggctttggggtc--aaatctgggtttaaattcttg i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1699342 181 - 2415367 gctaaatttatttaagtaaa-attttttggatcaattttaagaaaaatcttgaataaagaaaaataga-gtgtttaa--tggataggacaaaaattgtgatgttggcatgcaagtgactagag-ttgagaaatgctggtgta--agagaaaagggggctttggggtc--aaatctgggtttaaactcttg i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142769877 181 - 204313951 gctaaatttatttaagtaaa--tattttgggtcaattttaagaaaaattttgaataaagaaaagtata-gtgtttaa--tgaataggacaaaaattgtgatgttggcatacgatttactagagtttgagaaatgctggtgta--agagaaaagggggctttggggtc--caatctgggtttaaaatcttg i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2168366 181 + 10068113 gctaaatttatttaagtaaa--tattttgggtcaattttaagaaaaattttgaataaagaaaagtgca-gtgtttaa--tgaataggacaaaaattgggatgttggcatatgaattactagagtttaagaaatgctggtgta--agagaaaagggggctttggggtc--caatctgtgtttaaaatcttg i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 24553 181 - 709587 gctaaatttatttaagtaaa--tattttgggtcaatattaagaaaaattttgaataaacaaaagtata-gtgtttaa--tgaataggacaaaaattgtgatgttggcatatgaattactagagtttgagaaatgctggtgta--agagaaaagggggctttggggtc--taatctgtgtttaaaatcttg i cebCap1.NW_016107999v1 C 0 I 65 s aotNan1.NW_018501968v1 1105444 181 - 2246441 GCtaaattaatttaagtaaa--tattttgggtcaattttaagaaaaattttgaataaagaaaagtata-gtgtttaa--tgaataggacaaaaattgtgatgttggcatatgaattactagagtttgagaaTTGCtggtgta--agagaaaagggggctttggggtc--caatctgggtttaaaatcttg i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1196258 177 + 48283576 actaaatttatttaaataaa---tttttgaatc-attttaagaa----cttgaataaagagaagtataggtgttaca--tggataggctgaaaattctgaaggtgtcatggaaatgatcagaatttgagaaatgctAGAGTAACAGAGAATAGGgggctttcaggtc--aaatctgggtttaaa-tcttg i otoGar3.GL873522 I 38 C 0 s canFam3.chr4 37133102 168 + 88276631 actaaatttatttaactaaaaattttttaagttaattttaagaaaaatcttgaataaagaaa--tata-gctgttaacgtggatagaac-aaaattgtgaaagtggcatataaatgaccagagttttgggaatgctgGTCTg----agaagcagaggctttggggac----acctgggtg---------- i canFam3.chr4 I 49 C 0 e mm10.chr13 65953874 1192 - 120421639 I e proCoq1.NW_012152163v1 697209 284 - 940639 I e dasNov3.JH562710 215118 199 - 960158 I a score=13685.000000 s hg38.chr5_KI270795v1_alt 12606 4 + 131892 gctc s panTro5.chr5 5261240 4 - 181907262 gctc i panTro5.chr5 C 0 C 0 s panPan2.chr5 5523634 4 - 183735486 gctc i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1621211 4 + 3967317 gctc i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4472883 4 + 163208435 gctc i nomLeu3.chr2 C 0 C 0 s cerAty1.NW_012007035v1 1744181 4 - 21434487 gctc i cerAty1.NW_012007035v1 C 0 I 63 s chlSab2.chr23 4713074 4 - 82825804 gctc i chlSab2.chr23 C 0 I 61 s manLeu1.NW_012103943v1 208330 4 + 2521317 gctc i manLeu1.NW_012103943v1 C 0 I 63 s aotNan1.NW_018501968v1 1105625 4 - 2246441 gctc i aotNan1.NW_018501968v1 C 0 I 61 s otoGar3.GL873522 1196435 2 + 48283576 gt-- i otoGar3.GL873522 C 0 C 0 s canFam3.chr4 37133270 4 + 88276631 gctc i canFam3.chr4 C 0 I 3 e cebCap1.NW_016107999v1 24734 65 - 709587 I e saiBol1.JH378186 2168547 0 + 10068113 C e mm10.chr13 65953874 1192 - 120421639 I e calJac3.chr2 142770058 0 - 204313951 C e macNem1.NW_012018466v1 927188 0 - 16193990 C e rheMac8.chr6 5706323 0 - 180051392 C e macFas5.chr6 5898117 0 - 181584905 C e proCoq1.NW_012152163v1 697209 284 - 940639 I e dasNov3.JH562710 215118 199 - 960158 I e colAng1.NW_012115755v1 1699523 0 - 2415367 C a score=45217.000000 s hg38.chr5_KI270795v1_alt 12610 46 + 131892 ggccgggca-----cggtggctcacacctgtaatcccagcactttgggagg s panTro5.chr5 5261244 46 - 181907262 ggccgggcg-----cggtggctcacgcctgtaatcccagcactttgggagg i panTro5.chr5 C 0 C 0 s panPan2.chr5 5523638 46 - 183735486 ggccgggcg-----cggtggctcacgcctgtaatcccagcactttgggagg i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1621215 46 + 3967317 ggccgggca-----cggtggctcacgcctgtaatcccagcactttgggagg i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4472887 45 + 163208435 ggccgggtg------ggtggctcacacctgtaatcccagcactttgggagg i nomLeu3.chr2 C 0 C 0 s canFam3.chr4 37133277 50 + 88276631 ggttgggcatttgcctttggcttg-ggttgtgatcccggggtcctgggagg i canFam3.chr4 I 3 I 122 e cebCap1.NW_016107999v1 24734 65 - 709587 I e saiBol1.JH378186 2168547 0 + 10068113 C e mm10.chr13 65953874 1192 - 120421639 I e calJac3.chr2 142770058 0 - 204313951 C e otoGar3.GL873522 1196437 0 + 48283576 C e cerAty1.NW_012007035v1 1744185 63 - 21434487 I e macNem1.NW_012018466v1 927188 0 - 16193990 C e rheMac8.chr6 5706323 0 - 180051392 C e macFas5.chr6 5898117 0 - 181584905 C e proCoq1.NW_012152163v1 697209 284 - 940639 I e dasNov3.JH562710 215118 199 - 960158 I e aotNan1.NW_018501968v1 1105629 61 - 2246441 I e colAng1.NW_012115755v1 1699523 0 - 2415367 C e manLeu1.NW_012103943v1 208334 63 + 2521317 I e chlSab2.chr23 4713078 61 - 82825804 I a score=5008.000000 s hg38.chr5_KI270795v1_alt 12656 5 + 131892 ccaag s panTro5.chr5 5261290 5 - 181907262 ccgag i panTro5.chr5 C 0 C 0 s panPan2.chr5 5523684 5 - 183735486 ccgag i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1621261 5 + 3967317 ccgag i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4472932 5 + 163208435 ccgag i nomLeu3.chr2 C 0 C 0 s otoGar3.GL873522 1196437 3 + 48283576 --aag i otoGar3.GL873522 C 0 C 0 e cebCap1.NW_016107999v1 24734 65 - 709587 I e saiBol1.JH378186 2168547 0 + 10068113 C e mm10.chr13 65953874 1192 - 120421639 I e calJac3.chr2 142770058 0 - 204313951 C e cerAty1.NW_012007035v1 1744185 63 - 21434487 I e macNem1.NW_012018466v1 927188 0 - 16193990 C e rheMac8.chr6 5706323 0 - 180051392 C e macFas5.chr6 5898117 0 - 181584905 C e canFam3.chr4 37133327 122 + 88276631 I e proCoq1.NW_012152163v1 697209 284 - 940639 I e dasNov3.JH562710 215118 199 - 960158 I e aotNan1.NW_018501968v1 1105629 61 - 2246441 I e colAng1.NW_012115755v1 1699523 0 - 2415367 C e manLeu1.NW_012103943v1 208334 63 + 2521317 I e chlSab2.chr23 4713078 61 - 82825804 I a score=171171.000000 s hg38.chr5_KI270795v1_alt 12661 194 + 131892 gcgggcggatcacgaggtcaggagatcgagaccatcctggctaacacggtgaaaccccgtctctactaaaaatacaaaaaaattagcctggtgtggtggcaggcgcctgtagtcccagctgctcgggaggctgaggcgagagaatggcgtgaacccaggaggtggagcttgcagtgagccgagatcgcgccact s panTro5.chr5 5261295 194 - 181907262 gcgggcagatcacgaggtcaggagattgagaccatcctggctaacacggtgaaaccccgtctctactaaaaatacaaaaaaattagcctggtgtggtggcaggtgcctgtagtcccagctactcgggaggctgaggcgagagaatggcgtgaacccaggaggtggagcttgcagtgagccaagatcacgccact i panTro5.chr5 C 0 C 0 s panPan2.chr5 5523689 194 - 183735486 gcgggcagatcacgaggtcaggagatcgagaccatcctggctaacacggtgaaaccccgtctctactaaaaatacaaaaaaattagcctggtgtggtggcaggtgcctgtagtcccagctactcgggaggctgaggcgagagaatggcgtgaacccaggaggtggagcttgcagtgagccaagatcacgccact i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1621266 192 + 3967317 gcgggcggatcacgaggtcaggagatcgagaccatcctggctaacacggtgaaaccccgtctctactaaaaatac--aaaaattagcctggtgtggtggcaggctcctatagtcccagctactcgggaggctgaggcgagagaatggcgtgaacccaggaggtggagcttgcagagagccgagatcgcgccact i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4472937 192 + 163208435 gcgggcggatcacgaggtcaggagatcgagaccatcctggcta--acggtgaaaccccatctctactaaaaatacaaaaaaattagcctggcatggtggcaggtgcctgtagtcccagttgcttgggaggctgaggcgagagaatggtgtgaacccaggaggcggagcttgcagtgagccgagatcgcgccact i nomLeu3.chr2 C 0 C 0 e cebCap1.NW_016107999v1 24734 65 - 709587 I e saiBol1.JH378186 2168547 0 + 10068113 C e mm10.chr13 65953874 1192 - 120421639 I e calJac3.chr2 142770058 0 - 204313951 C e otoGar3.GL873522 1196440 0 + 48283576 C e cerAty1.NW_012007035v1 1744185 63 - 21434487 I e macNem1.NW_012018466v1 927188 0 - 16193990 C e rheMac8.chr6 5706323 0 - 180051392 C e macFas5.chr6 5898117 0 - 181584905 C e canFam3.chr4 37133327 122 + 88276631 I e proCoq1.NW_012152163v1 697209 284 - 940639 I e dasNov3.JH562710 215118 199 - 960158 I e aotNan1.NW_018501968v1 1105629 61 - 2246441 I e colAng1.NW_012115755v1 1699523 0 - 2415367 C e manLeu1.NW_012103943v1 208334 63 + 2521317 I e chlSab2.chr23 4713078 61 - 82825804 I a score=10794.000000 s hg38.chr5_KI270795v1_alt 12855 5 + 131892 tca-------------------------------------------------------------ta s panTro5.chr5 5261489 61 - 181907262 gcactccagcctgggcaacaaacagagtaagactctgtctc-----aaaaaaaaaaaaaaatcttg i panTro5.chr5 C 0 C 0 s panPan2.chr5 5523883 63 - 183735486 gcactccagcctgggcaacaaacagagtaagactctgtctc---aaaaaaaaaaaaaaaaatcttg i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1621458 59 + 3967317 gcactccagcctggg---caaacagagtaagactctgtctc----aaaaaaaaaaaaaaaatcttg i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4473129 66 + 163208435 gcactccagcctgggcaacaaacagagcaagactccgtctcaaaaaaaaaaaaagaaaaaaacttg i nomLeu3.chr2 C 0 C 0 s dasNov3.JH562710 215317 5 - 960158 -------------------------------------------------------------tctta i dasNov3.JH562710 I 199 C 0 e cebCap1.NW_016107999v1 24734 65 - 709587 I e saiBol1.JH378186 2168547 0 + 10068113 C e mm10.chr13 65953874 1192 - 120421639 I e calJac3.chr2 142770058 0 - 204313951 C e otoGar3.GL873522 1196440 0 + 48283576 C e cerAty1.NW_012007035v1 1744185 63 - 21434487 I e macNem1.NW_012018466v1 927188 0 - 16193990 C e rheMac8.chr6 5706323 0 - 180051392 C e macFas5.chr6 5898117 0 - 181584905 C e canFam3.chr4 37133327 122 + 88276631 I e proCoq1.NW_012152163v1 697209 284 - 940639 I e aotNan1.NW_018501968v1 1105629 61 - 2246441 I e colAng1.NW_012115755v1 1699523 0 - 2415367 C e manLeu1.NW_012103943v1 208334 63 + 2521317 I e chlSab2.chr23 4713078 61 - 82825804 I a score=26664.000000 s hg38.chr5_KI270795v1_alt 12860 6 + 131892 gctctt-- s panTro5.chr5 5261550 6 - 181907262 gctctg-- i panTro5.chr5 C 0 C 0 s panPan2.chr5 5523946 6 - 183735486 gctctg-- i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1621517 6 + 3967317 gctctg-- i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4473195 6 + 163208435 gccgtg-- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5706323 6 - 180051392 gctctg-- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5898117 6 - 181584905 gctctg-- i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 927188 6 - 16193990 gctctg-- i macNem1.NW_012018466v1 C 0 C 0 s colAng1.NW_012115755v1 1699523 6 - 2415367 gctctg-- i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142770058 6 - 204313951 gctctg-- i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2168547 6 + 10068113 gctctg-- i saiBol1.JH378186 C 0 C 0 s canFam3.chr4 37133449 6 + 88276631 gctctt-- i canFam3.chr4 I 122 C 0 s dasNov3.JH562710 215322 6 - 960158 --cctgta i dasNov3.JH562710 C 0 C 0 e cebCap1.NW_016107999v1 24734 65 - 709587 I e mm10.chr13 65953874 1192 - 120421639 I e otoGar3.GL873522 1196440 0 + 48283576 C e cerAty1.NW_012007035v1 1744185 63 - 21434487 I e proCoq1.NW_012152163v1 697209 284 - 940639 I e aotNan1.NW_018501968v1 1105629 61 - 2246441 I e manLeu1.NW_012103943v1 208334 63 + 2521317 I e chlSab2.chr23 4713078 61 - 82825804 I a score=282901.000000 s hg38.chr5_KI270795v1_alt 12866 77 + 131892 tgacttcatagctttgacactttggcttgtcg-tcttatctcctatttccttc---------------atctata----aaatcttatagattttat s panTro5.chr5 5261556 76 - 181907262 tgacttcatagcttt-acactttggcttgtcg-tcttatctcctatttccttc---------------atctata----aaatcttatagattttat i panTro5.chr5 C 0 C 0 s panPan2.chr5 5523952 76 - 183735486 tgacttcatagcttt-acactttggcttgtcg-tcttatctcctatttccttc---------------atctata----aaatcttatagattttat i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1621523 74 + 3967317 tgacttcatagctttgacactttggctt---g-tcttatctcctatttccttc---------------atctata----aaatcttatagattttat i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4473201 92 + 163208435 tgacttcatagctttgacactttggcttgtct-tcttatctcctatttccttcattttatagaaggaaatctata----aaatcttatagattttat i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5706329 59 - 180051392 tgacttcatagttttgacactttggctcatct-tcttatctcctatttccttt---------------gtctata---------------------- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5898123 59 - 181584905 tgacttcatagttttgacactttggctcatct-tcttatctcctatttccttt---------------gtctata---------------------- i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 927194 59 - 16193990 tgacttcatagttttgacactttggctcatct-tcttatctcctatttccttt---------------gtctata---------------------- i macNem1.NW_012018466v1 C 0 C 0 s colAng1.NW_012115755v1 1699529 63 - 2415367 tgacttcatagttttgacactttggctcatct-tcttatctcctatttccttc---------------gtctataaaat------------------ i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142770064 59 - 204313951 tgacttcatagctttgatactttggctcatct-ttttatcttttattttcttt---------------atctata---------------------- i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2168553 59 + 10068113 tgacttcatagctttgatactttggcttatct-ttttatcttttattttcttt---------------atctata---------------------- i saiBol1.JH378186 C 0 C 0 s otoGar3.GL873522 1196440 59 + 48283576 tgacttcatagctttgactctttggcaga----tcttatcttctgtat-ctta---------------atctata----aaat-------------- i otoGar3.GL873522 C 0 C 0 s canFam3.chr4 37133455 63 + 88276631 ttatttcactgctttgacagtttggctcatctctcatatcttccatat-cttc---------------atatgta----gaat-------------- i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 215328 57 - 960158 tcacttaaca-ctttgacactttggcta-----ttctctcttccattt-cttc---------------agctata----aaat-------------- i dasNov3.JH562710 C 0 C 0 e cebCap1.NW_016107999v1 24734 65 - 709587 I e mm10.chr13 65953874 1192 - 120421639 I e cerAty1.NW_012007035v1 1744185 63 - 21434487 I e proCoq1.NW_012152163v1 697209 284 - 940639 I e aotNan1.NW_018501968v1 1105629 61 - 2246441 I e manLeu1.NW_012103943v1 208334 63 + 2521317 I e chlSab2.chr23 4713078 61 - 82825804 I a score=159838.000000 s hg38.chr5_KI270795v1_alt 12943 14 + 131892 aaatgg-agataata s panTro5.chr5 5261632 14 - 181907262 aaatgg-agataata i panTro5.chr5 C 0 C 0 s panPan2.chr5 5524028 14 - 183735486 aaatgg-agataata i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1621597 14 + 3967317 aaatgg-agataata i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4473293 14 + 163208435 aaatgg-agataata i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5706388 14 - 180051392 aaatgg-ggataata i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5898182 14 - 181584905 aaatgg-ggataata i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 927253 14 - 16193990 aaatgg-ggataata i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1744248 14 - 21434487 aaatgg-ggataata i cerAty1.NW_012007035v1 I 63 C 0 s chlSab2.chr23 4713139 14 - 82825804 aaatgg-ggataata i chlSab2.chr23 I 61 C 0 s manLeu1.NW_012103943v1 208397 14 + 2521317 aaatgg-ggataata i manLeu1.NW_012103943v1 I 63 C 0 s colAng1.NW_012115755v1 1699592 10 - 2415367 ----gg-ggttaata i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142770123 14 - 204313951 aaatgt-ggataata i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2168612 14 + 10068113 aaatgg-ggataata i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 24799 14 - 709587 aaatgg-ggataata i cebCap1.NW_016107999v1 I 65 C 0 s aotNan1.NW_018501968v1 1105690 15 - 2246441 aaatggagaataata i aotNan1.NW_018501968v1 I 61 C 0 s otoGar3.GL873522 1196499 10 + 48283576 ----gg-ggataata i otoGar3.GL873522 C 0 C 0 s canFam3.chr4 37133518 10 + 88276631 ----gg-ggataata i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 215385 10 - 960158 ----gg-ggatcgta i dasNov3.JH562710 C 0 C 0 e mm10.chr13 65953874 1192 - 120421639 I e proCoq1.NW_012152163v1 697209 284 - 940639 I a score=441232.000000 s hg38.chr5_KI270795v1_alt 12957 32 + 131892 aagtgtatgttagaggagtattgtgaagacca s panTro5.chr5 5261646 32 - 181907262 aagtgtatgttagaggagtattgtgaagacca i panTro5.chr5 C 0 C 0 s panPan2.chr5 5524042 32 - 183735486 aagtgtatgttagaggagtattgtgaagacca i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1621611 32 + 3967317 aagtgtatgttagaggagtattgtgaagacca i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4473307 32 + 163208435 aagtgtatgttagaggagtattgtgaagacca i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5706402 31 - 180051392 aa-tgtgtcttagaggagtattgtgaagacca i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5898196 31 - 181584905 aa-tgtgtcttagaggagtattgtgaagacca i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 927267 31 - 16193990 aa-tgtgtcttagaggagtattgtgaagacca i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1744262 32 - 21434487 aagtgtgtcttagaggagtattgtgaagacca i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4713153 32 - 82825804 aagtgtgtcttagaggagtattatgaagacca i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 208411 32 + 2521317 aagtgtgtcttagaggagtattgtgaagacca i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1699602 32 - 2415367 aagtgtgtcttagaggagtattgtgaagacca i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142770137 32 - 204313951 aagtatatcttagaggagtattgtgaagacca i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2168626 32 + 10068113 aagtatatcttagaggagtatcgtgaagacca i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 24813 32 - 709587 aagtatatcttagaggagtattgtgaagacca i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1105705 32 - 2246441 aagtatatcttagaggagtattgtgaagacca i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 697493 32 - 940639 aagtgtaccttagagaagtatcgtgaggacca i proCoq1.NW_012152163v1 I 284 C 0 s otoGar3.GL873522 1196509 32 + 48283576 aagggtactttagagaagtattgtaaggacca i otoGar3.GL873522 C 0 C 0 s canFam3.chr4 37133528 32 + 88276631 aagtgttctttagagaattatagtgaggaCCC i canFam3.chr4 C 0 I 1 s dasNov3.JH562710 215395 32 - 960158 aagtatacattatagcattattgtgaggacca i dasNov3.JH562710 C 0 C 0 e mm10.chr13 65953874 1192 - 120421639 I a score=617999.000000 s hg38.chr5_KI270795v1_alt 12989 54 + 131892 aatggggaaatgtgtagaTGAAAGTTCTGGACTTA---TTGTTGAATC---GTAAGTGGT s panTro5.chr5 5261678 54 - 181907262 aatggggaaatgtgtagaTGAAAGTTCTGGACTTA---TTGTTGAATC---ATAAGTGGT i panTro5.chr5 C 0 C 0 s panPan2.chr5 5524074 54 - 183735486 aatggggaaatgtgtagaTGAAAGTTCTGGACTTA---TTGTTGAATC---ATAAGTGGT i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1621643 54 + 3967317 aatggggaaatgtgtagaTGAAAGTTCTGGACTTA---TTGTTGAATC---GTAAGTGGT i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4473339 54 + 163208435 aataggaaaatgtgtagaTGAATGTTCTGGACTCA---TTGTTGAATC---ATAAGTGGT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5706433 54 - 180051392 aatcaggaaatgtgtagaTGAATGTTCTGGACTCA---TTGTTGAATT---ATAAATGGT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5898227 54 - 181584905 aatcaggaaatgtgtagaTGAATGTTCTGGACTCA---TTGTTGAATT---ATAAATGGT i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 927298 54 - 16193990 aatcaggaaatgtgtagaTGAATGTTCTGGACTCA---TTGTTGAATT---ATAAATGGT i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1744294 54 - 21434487 aatcaggaaatgtgtagatgaatgtgctggactca---ttgttgaatt---ataaatggt i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4713185 54 - 82825804 aatcaggaaatgtgtagaTGGATGTTCTGGACTCA---TTGTTGAATT---ATAAATAGT i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 208443 54 + 2521317 aatcaggaaatgtgtagatgaatgtgctggactca---ttgttgaatt---ataaatggt i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1699634 54 - 2415367 aatcaggaaatgtgtagaTGAATGTGCTGGACTCA---TTGTTGAATT---ATAAATAGT i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142770169 54 - 204313951 aatggggaaatgtgtagaTAAATATGCTGGACTCA---TTGTTGAGTC---ATAAGTGGT i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2168658 54 + 10068113 aatggggaaatgtgtagaTAAATATGCTGGACTCA---TTGTTGAATC---ATAAGTGGT i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 24845 54 - 709587 aatggggaaatgtgtagaTAAATATGCTGGACTCA---TTGTTGAATC---ATAAGTGGC i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1105737 54 - 2246441 aatggggaaatgtgtagataaatatgctggactca---ctgttgaatc---ataagtggt i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 697525 57 - 940639 aatggggagatttgtagatgaatgagctGGACTTAGAGTTGATGATTT---GTAAGTGAT i proCoq1.NW_012152163v1 C 0 C 0 s otoGar3.GL873522 1196541 57 + 48283576 gatggggaaatttgtagacgaatgggctGGACTTACAGTTGATAATGC---AGAAGTGAT i otoGar3.GL873522 C 0 C 0 s mm10.chr13 65955066 56 - 120421639 AGTGGGGAGGTGCTTTGACAAATGT-CTAGACTCA---CGGTCGCCTCTTGGTCATCGGA i mm10.chr13 I 1192 C 0 s canFam3.chr4 37133561 54 + 88276631 CAGGGGGAAATTTGTAGATGAATATTCTGGACTTA---TAATTGGTGA---GTAAGTGGT i canFam3.chr4 I 1 I 216 s dasNov3.JH562710 215427 11 - 960158 aatgaggaaat------------------------------------------------- i dasNov3.JH562710 C 0 C 0 a score=2716990.000000 s hg38.chr5_KI270795v1_alt 13043 173 + 131892 AGCTCCCTTCCATTGTCTAGGACTTTAATGAGTAAGCC-CGGAAG---AA-AGCTCTGGTCTTCTTTCTAGGATAGTGCAATAAACTTGTAGAGGATTATGAGCAAACAGATTATCTTGCT----GATTATGTCTGGGTTCCCAGGGGAGAACATTAATATCTGCTGGAGTCCTGATGGGCA s panTro5.chr5 5261732 173 - 181907262 AGCTCCCTTCCATCGTCTAGGACTTTAATGAGTAAGCC-CGGAAG---AA-AGCTCTGGTCTTCTTTCTAGGATAGCGCAATAAACTTGTGGAGGATTATGAGCAAACAGATTATCTTGCT----GATTATGTCTGGGTTCCCAGGGGAGAACATTAATATCTGCTGGAGTCCTGATGGGCA i panTro5.chr5 C 0 C 0 s panPan2.chr5 5524128 173 - 183735486 AGCTCCCTTCCATCGTCTAGGACTTTAATGAGTAAGCC-CGGAAG---AA-AGCTCTGGTCTTCTTTCTAGGATAGTGCAATAAACTTGTGGAGGATTATGAGCAAACAGATTATCTTGCT----GATTATGTCTGGGTTCCCAGGGGAGAACATTAATATCTGCTGGAGTCCTGATGGGCA i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1621697 173 + 3967317 AGCTCCCTTCCATTGTCTAGGACTTTAATGAGTAAGCC-CGGAAG---AA-AGCTCTGGTCTTCTTTCTAGGATAGTGCAATAAACTTGTGGAGGATTATGAGCAAACAGATTATCTTGCT----GATTATGTCTGGGTTCCCAGGGGAGAACATTAATATCTGCTGGAGTCCTGATGGGCA i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4473393 173 + 163208435 AGCTCCCTTTCATTGTCTAGGACTTTAATGAGTAAGCC-CTGAAG---AA-AGCTCTGGTCTTCTTTCTAGGATAGCACAATAAATTTGTGGAAGATTATGAGCAAACAGATTATCTTGCT----AATTATGTTTGGGTTCCCAGGGGAGAACATTAATATCTGCTGGAGTCCTGATGGGCA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5706487 173 - 180051392 AGCTCCCTTCCATTGTCTAGGACTTTAATGAGTAAGCC-CTGAAG---AA-AGCTCTGGTCTTCTTTCTAGGATAGCACAATAAACTTGTGGCGGATTATGAGCAAACAGATTATCTTGCT----GTTTATATCTGGGTTCCTAGGGGAGAACATTAATATCTGCTGGAGTCCTGATGGGCA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5898281 173 - 181584905 AGCTCCCTTCCATTGTCTAGGACTTTAATGAGTAAGCC-CTGAAG---AA-AGCTCTGGTCTTCTTTCTAGGATAGCACAATAAACTTGTGGCGGATTATGAGCAAACAGATTATCTTGCT----GTTTATATCTGGGTTCCTAGGGGAGAACATTAATATCTGCTGGAGTCCTGATGGGCA i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 927352 173 - 16193990 AGCTCCCTCCCATTGTCTAGGACTTTAATGAGTAAGCC-CTGAAG---AA-AGCTCTGGTCTTCTTTCTAGGATAGCACAATAAACTTGTGGCGGATTATGAGCAAACAGATTATCTTGCT----GTTTATATCTGGGTTCCTAGGGGAGAACATTAATATCTGCTGGAGTCCTGATGGGCA i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1744348 173 - 21434487 agctcCCTCCCATTGTCTAGGACTTTAGTGAGTAAGCC-CTGAAG---GA-AGCTCTGGTCTTCTTTCTAGGATAGCACAATAAACTTGTGGAGGATTATGAGCAAACAGATTATCTTGCT----GTTTATATCTGGGTTCCTAGGGGAGAACATTAATATCTGCTGGAGTCCTGATGGGCA i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4713239 173 - 82825804 AGCTCCCTCCCATTGTCTAGGACTTTAGTGAGTAAGCC-CTGAAG---AA-AGCTGTGGTCTTCTTTCTAGGATGGCACAATAAACTTGTGGAGGATTATGAGCAAACAGATTATCTTGCT----GTTTATATCTGGGTTCCTAGGGGAGAACATTAATATCTGCTGGAGTCCTGATGGGCA i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 208497 173 + 2521317 agctcCCTCCCATTGTCTAGGACTTTAGTGAGTAAGCC-CTGAAG---GA-AGCTCTGGTCTTCTTTCTAGGATAGCACAATAAACTTGTGGAGGATTATGAGCAAACAGATTATCTTGCT----GTTTATATCTGGGTTCCTAGGGGAGAACATTAATATCTGCTGGAGTCCTGATGGGCA i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1699688 173 - 2415367 AGCTCCCTCCCATTGTCTAGGACTTTAATGAGTAAGCC-CTGAAG---AA-AGCTCTGGTCTTCTTTCTAGGATAGCACAATAAACTTGTGGAGGGTTATGAGCAAACAGATGATCTTACT----GTTTATATCTGGGTTCCTAGGGGAGAACATTAATATCTGCTGGAGTCCTGATGGGCA i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142770223 173 - 204313951 AGTTCCCTTCTCTTGTCTAGGACCTTAATGAGTAAGCC-CTGAAG---AA-AGCTCTGGTCTTCTTTCTAGGATAGCAAAATAAATTTAAGGAGGATTATGAGCAAACAGATTATCTTGTT----GATTATGTCTGGGTTCCCAGGGGAGAACATTAATATCTGCTGGAGTCCTGATGGGCA i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2168712 173 + 10068113 AGTTCCCTTCTCTTGTCTAGGACCTTAATGAGTAAGCC-CTGAAG---AA-GGCTCTGGTCTTCTTTCTAGGATAGCAAAATAAATTTGTGGAGGATTATGAGCAAACAGATTATCTTGTT----GATTATGTCTGGGTTCCCAGGGGAGAACATTAATATCTGCTGGAGTCCTGATGGGCA i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 24899 173 - 709587 AGTTCCCTCCTCTTGTCTAGGACCTTAATGAGTAAGCC-CTGAAG---AA-AGCTCTGGTCTTCTTTCTAGGATAGCAAAATGAATTTGTGGAGGATTATGAGCAAACAGATTATCTTGTT----GATTACGTCTGGGTTCCCAGGGGAGAACATTAATATCTGCTGGAGTCCTGATGGGCA i cebCap1.NW_016107999v1 C 0 M 2080 s aotNan1.NW_018501968v1 1105791 173 - 2246441 agttcCCTTCTCTTGTCTAGGACCTTAATGAGTAAGCC-CTGAAG---AA-AGTTCTGGTCTTCTTTCTAGGACAGCAGAATAAATTTGTGGAGGATTATGAGCAAACAGATTATCTTGTT----GATTATGTCTGGGTTCCCAGGGGAGAACATTAATATCTGCTGGAGTCCCGATGGGCA i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 697582 172 - 940639 AGTTCCCTTCCCTTGACTAGGATCTTAATGAATGACGT-CTGAAG---AT-AGCTCTGGTCTTCTTACTAGGATAGCAAAATAAACTC-TGGAGGATTGTGAGCAAACATATTATCTTGCT----GATTGTATCTGGGTTCCCAGGGGAGAACATTAATATCTGCTGGAGTCCTGATGGGCA i proCoq1.NW_012152163v1 C 0 C 0 s otoGar3.GL873522 1196598 172 + 48283576 AATTCTCGTTCATTGATTAGGTACTTTATGAACGAGCT-CTGAAG---AT-AGCTCTGGTCTTCTTTCTAGGATAGCAAAATAAACTC-TGGAGGATTATGAGCAAACAGATTATCTTGCT----GATTGTATCTGGGTTCCCAGGAGAGAACATTAATATCTGCTGGAGTCCTGATGGGCA i otoGar3.GL873522 C 0 C 0 s mm10.chr13 65955122 170 - 120421639 AGCTTCCTTCCATTGATTTGG----TGAGGAATAAGTG-CTGAAG---GT-AGCTCTGATCTTCTTTCCAGGAGAGCAGAATAAACTC-TGGAGGCCGATGGGCAA--AGGTGAGCTTGCTGACGGATTATATCTGGGTTCCCAGGGGAGAACATTAACATCTGTTGGAGTCCCGACGGGCA i mm10.chr13 C 0 C 0 s canFam3.chr4 37133831 174 + 88276631 cATTCCCTTCTATTGGTTCGGACCTTAGTGAATGGAAT-TTGGAGATAAT-AGCTCTGGTCTTTGTCAGATTAAAAAAAAATAAACTTCTGCAGGATTTTGGGCTAACAA--TATCTTCCT----GATTATATCTGGGTTTCTAGGGGAGAATATAAATATCTGCTGGAGTCCTGATGGGCA i canFam3.chr4 I 216 C 0 s dasNov3.JH562710 215438 171 - 960158 ---TCCCTTTCCCTGACTAGGGCATCAATGAATGAGCCTCTGAAG---GACAGCTCTGGTCTTCTTTCTAAGATAGCAGAGT-AACTTCTGGAGAATTATGGACAGACAGGTTATCATGCT----GATTATATCTGGCTTCTCAGGAGAGAACATTAATATCTGCTGGAGTCCTGATGGACA i dasNov3.JH562710 C 0 C 0 a score=3299081.000000 s hg38.chr5_KI270795v1_alt 13216 202 + 131892 GACCATTGCTGTAGGCAACAAGGATGATGTGGTGACCTTTATTGATGCCAAGACACACCGTTCCAAAGCAGAAGAGCAGTTCAAGTTCGAGGTCAACGAAATCTCCTGGAACAATGACAATAATATGTTCTTCCTGACAAATGGCAATGGTTGTATCAACATCCTCAGGTGAGGGGG-T-C-TAGCTTAGGGGACTGTCATGTct s panTro5.chr5 5261905 202 - 181907262 GACCATTGCTGTAGGCAACAAGGATGATGTGGTGACCTTTATTGATGCCAAGACACACCGTTCCAAAGCAGAAGAGCAGTTCAAGTTCGAGGTCAACGAAATCTCCTGGAACAATGACAATAATATGTTCTTCCTGACAAATGGCAATGGTTGTATCAACATCCTCAGGTGAGGGGG-T-C-TAGCTTAGGGGACTGTCATGTCT i panTro5.chr5 C 0 C 0 s panPan2.chr5 5524301 202 - 183735486 GACCATTGCTGTAGGCAACAAGGATGATGTGGTGACCTTTATTGATGCCAAGACACACCGTTCCAAAGCAGAAGAGCAGTTCAAGTTCGAGGTCAACGAAATCTCCTGGAACAATGACAATAATATGTTCTTCCTGACAAATGGCAATGGTTGTATCAACATCCTCAGGTGAGGGGG-T-C-TAGCTTAGGGGACTGTCATGTCT i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1621870 202 + 3967317 GACCATTGCTGTAGGCAACAAGGATGATGTGGTGACCTTTATTGATGCCAAGACACACCGTTCCAAAGCAGAAGAGCAGTTCAAGTTCGAGGTCAACGAAATCTCCTGGAACAATGACAATAATATGTTCTTCCTGACAAATGGCAATGGTTGTATCAACATCCTCAGGTGAGGGGG-T-C-TAGCTTAGGGGACTGTCATGTCT i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4473566 202 + 163208435 GACCATCGCTGTAGGCAACAAGGATGATGTGGTGACCTTTATTGATGCCAAGACACACCGTTCCAAAGCAGAAGAGCAGTTCAAGTTCGAGGTCAACGAAATCTCCTGGAACAATGACAATAATATGTTCTTCCTGACAAATGGCAATGGTTGTATCAACATCCTCAGGTGAGGGGG-T-C-TAGCTTAGGGGACTGTCATGTct i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5706660 202 - 180051392 GACCATTGCTGTAGGCAACAAAGATGATGTGGTGACCTTTATCGATGCCAAGACACACCGTTCCAAAGCAGAAGAGCAGTTCAAGTTTGAGGTCAACGAAATCTCCTGGAACAATGACAACAACATGTTCTTCCTGACAAATGGCAATGGTTGTATCAACATCCTCAGGTGAGGGGG-T-C-TAGCTTAGGGGACTGTCATATCT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5898454 202 - 181584905 GACCATTGCTGTAGGCAACAAAGATGATGTGGTGACCTTTATCGATGCCAAGACACACCGTTCCAAAGCAGAAGAGCAGTTCAAGTTCGAGGTCAACGAAATCTCCTGGAACAATGACAACAACATGTTCTTCCTGACAAATGGCAATGGTTGTATCAACATCCTCAGGTGAGGGGG-T-C-TAGCTTAGGGGACTGTCATATct i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 927525 202 - 16193990 GACCATTGCTGTAGGCAACAAAGATGATGTGGTGACCTTTATTGATGCCAAGACACACCGTTCCAAAGCAGAAGAGCAGTTCAAGTTCGAGGTCAACGAAATCTCCTGGAACAATGACAACAACATGTTCTTCCTGACAAATGGCAATGGTTGTATCAACATCCTCAGGTGAGGGGG-T-C-TAGCTTAGGGGACTGTCGTATCT i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1744521 202 - 21434487 GACCATTGCTGTAGGCAACAAAGATGATGTGGTGACCTTTATTGATGCCAAGACACACCGTTCCAAAGCAGAAGAGCAGTTCAAGTTCGAGGTCAACGAAATCTCCTGGAACAATGACAACAACATGTTCTTCCTGACAAATGGCAATGGTTGTATCAACATCCTCAGGTGAGGGGA-T-C-TAGCTTAGGGGACTGTCATATCT i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4713412 202 - 82825804 GACCATTGCTGTAGGCAACAAAGATGATGTGGTGACCTTTATTGATGCCAAGACACACCGTTCCAAAGCAGAAGAGCAGTTCAAGTTCGAGGTCAACGAAATCTCCTGGAACAATGACAACAACATGTTCTTCCTGACAAATGGCAATGGTTGTATCAACATCCTCAGGTGAGGGGG-T-C-TAGCTTAGGGGACTGTCATATct i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 208670 202 + 2521317 GACCATTGCTGTAGGCAACAAAGATGATGTGGTGACCTTTATTGATGCCAAGACACACCGTTCCAAAGCAGAAGAGCAATTCAAGTTCGAGGTCAACGAAATCTCCTGGAACAATGACAACAACATGTTCTTCCTGACAAATGGCAATGGTTGTATCAACATCCTCAGGTGAGGGGG-T-C-TAGCTTAGGGGACTGTCATATCT i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1699861 202 - 2415367 GACCATTGCTGTAGGCAACAAAGATGATGTGGTGACCTTTATTGATGCCAAGACGCACCGTTCCAAAGCAGAAGAGCAGTTCAAGTTCGAGGTCAACGAAATCTCCTGGAACAATGACAACAACATGTTCTTCCTGACAAATGGCAATGGTTGTATCAACATCCTCAGGTGAGGGGG-T-C-TAGTTTAGGGGACTGTCATATCT i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142770396 202 - 204313951 GACCATTGCTGTAGGCAACAAGGATGATGTGGTGACTTTCATCGATGCCAAGACACACCGTTCCAAAGCAGAAGAGCAGTTCAAGTTTGAGGTCAATGAAATCTCCTGGAACAATGACAATAACATGTTCTTCCTGACAAACGGCAATGGTTGTATCAACATCCTCAGGTAAGAGGG-A-C-GAGCTTAGGGGACTGTCATATCT i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2168885 202 + 10068113 GACCATTGCTGTAGGCAACAAGGATGATGTGGTGACTTTCATTGATGCCAAGACACACCGTTCCAAAGCAGAAGAGCAGTTCAAGTTTGAGGTCAATGAAATCTCCTGGAACAATGACAATAACATGTTCTTCCTGACAAATGGCAATGGTTGTATCAACATCCTCAGGTAAGGGGG-A-C-TAGCTTAGGGGACTGTCATATCT i saiBol1.JH378186 C 0 C 0 s aotNan1.NW_018501968v1 1105964 202 - 2246441 GACCATTGCTGTAGGCAACAAGGATGATGTGGTGACTTTCATTGATGCCAAGACACACCGTTCCAAAGCAGAAGAGCAGTTCAAGTTTGAGGTCAATGAAATCTCCTGGAACAATGACAATAACATGTTCTTCCTGACAAATGGCAATGGTTGTATCAACATCCTCAGGTAAGGGGG-A-C-TACCTTAGGGGACTGTCATATCT i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 697754 203 - 940639 GACCATTGCTGTAGGCAACAAGGATGATGTGGTGACCTTTATTGATGCCAAGACACACCGTTCCAAAGCAGAAGAGCAGTTCAAATTTGAGGTCAACGAAATCTCCTGGAACAATGATAATAACATGTTCTTCCTGACAAATGGCAATGGTTGTATCAACATCCTCAGGTGAGGGGATT-T-TAGCTTAGGGGATTGTTACGTCT i proCoq1.NW_012152163v1 C 0 C 0 s otoGar3.GL873522 1196770 200 + 48283576 GACCATTGCTGTAGGCAACAAGGATGATGTGGTGACCTTTATTGATGCCAAGACACACCGTTCCAAAGCAGAAGAGCAGTTCAAGTTTGAAGTCAATGAAATTTCCTGGAACAATGACAATAACATGTTCTTCCTGACAAATGGCAATGGTTGTATCAACATCCTCAGGTGAGGGGA---T-TGGCTTAGGGGATTATC-TATTT i otoGar3.GL873522 C 0 C 0 s mm10.chr13 65955292 197 - 120421639 GACCATCGCTGTGGGCAACAAGGACGACGTTGTGACTTTCATTGACGCCAAGACACACCGCTCCAAAGCGGAGGAGCAGTTCAAGTTTGAGGTCAATGAGATCTCATGGAACAACGACAACAACATGTTCTTCCTGACCAACGGCAATGGTTGCATCAACATCCTCAGGTGAGGC---A-C-TGGCC---GGGGTTGTCAGACCT i mm10.chr13 C 0 C 0 s canFam3.chr4 37134005 202 + 88276631 GACCATAGCTGTAGGCAACAAGGATGATGTGGTGACCTTTATTGATGCCAAGACACACCGTTCTAAGGCGGAAGAGCAGTTCAAGTTTGAAGTAAATGAAATCTCCTGGAATAATGACAATAACATGTTCTTCCTGACAAATGGCAATGGTTGTATCAACATCCTCAGGTGAGGGGG-T-TGTAGTTTA-GGGACTGTCATATCT i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 215609 203 - 960158 GACCATTGCTGTAGGCAACAAGGATGATGTGGTGACCTTCATTGATGCCAAGACACACCGTTCCAAAGCAGAGGAGCAGTTCAAGTTTGAGGTCAACGAAATCTCCTGGAACAATGACAATAACATGTTCTTTCTGACAAATGGCAATGGTTGTATCAACATCCTCAGGTGAGGGGA-TGC-TAGCTTAGGGTACTGTCGTGCCT i dasNov3.JH562710 C 0 I 321 e cebCap1.NW_016107999v1 25072 2080 - 709587 M a score=1473828.000000 s hg38.chr5_KI270795v1_alt 13418 147 + 131892 ttgtgctgggtgctgtgtcagatatggagatgaattagatgtgagcctatcctgaaggagcttaAAACACAAATAG-------TAAGAGAGAATCCTAACCTGTCTTAAGTACATTTGAGCTGTATATtttatatactttatattttactgagt s panTro5.chr5 5262107 147 - 181907262 TtgtgctgggtgctgtgtcagatatggagatgaattagatgtgagcctatcctgaaggagcttaaaaCACAAATAG-------TAAGAGAGAATCCTAACCTGTCTTAAGTACATTTGAGCTGTATATTTTATATACTTTATATTTTACTGAGT i panTro5.chr5 C 0 C 0 s panPan2.chr5 5524503 143 - 183735486 Ttgtgctgggtgctgtgtcagatatggagatgaattagatgtgagcctatcctgaaggagcttaaaacacaaat-----------agagagaATCCTAACCTGTCTTAAGTACATTTGAGCTGTATATTTTATATACTTTATATTTTACTGAGT i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1622072 147 + 3967317 TtgtgctgggtgctgtgtcagatatggagatgaattagatgtgagcctatcctgaaggagcttaaaaCACAAATAG-------TAAGAGAGAATCCTAACCTGTCTTAAGTACATTTGAGCTGTATATtttatatactttatattttactgagt i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4473768 147 + 163208435 ttgtgctgggtgctgtgtcagatatggagatgaattagatgtgagtctatcctgaaggagcttaAAACACAAATAG-------TAAGAGAGAATCCTAACCtgtcttaagtacatttgagctgtatattttatacactttatattttactgagt i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5706862 139 - 180051392 TtgtgctgggtgctgtgccagatacggagatgaattagatgtgagcctatcctgaaggagcttaaaaCACAAAT---------------AGAATCCTAACCTGTTTTAAGTACATTTGAGCTGTATATtttatatactttatattttactgagt i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5898656 139 - 181584905 ttgtgctgggtgctgtgccagatacggagatgaattagatgtgagcctatcctgaaggagcttaAAACACAAAT---------------AGAATCCTAACCTGTTTTAAGTACATTTGAGCTGTATATtttatatactttatattttactgagt i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 927727 139 - 16193990 TtgtgctgggtgctgtgccagatacggagatgaattagatgtgagcctatcctgaaggagcttaaaaCACAAAT---------------AGAATCCTAACCtgtgttaagtacatttgagctgtatattttatatactttatattttactgagt i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1744723 139 - 21434487 TtgtgctgggtgctatgtcagatacggagatgaattagatgtgagcctatcctgaagaagcttaaaaCACAAAT---------------AGAATCCTAACCTGTTTTAAGTACATTTGAGCTGTATATtttatatactttatattttactgagt i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4713614 139 - 82825804 ttgtgctgggtgctgtgtcagatacggagatgaattagatgtgagcctatcctgaaggagcttaAAACACAAAT---------------AGAATCCTAACCTGTTTTAAATACATTTGAGCTGTATATtttatatactttatattttactgagt i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 208872 139 + 2521317 TtgtgctgggtgctgtgtcagatacggagatgaattagatgtgagcctatcctgaagaagcttaaaaCACAAAT---------------AGAATCCTAACCTGTTTTAAGTACATTTGAGCTGTATATtttatatactttatattttactgagt i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1700063 139 - 2415367 TtgtgctgggtgctgtgtcagatacggaaatgaattagatgtgagcctatcctgaaggagcttaaaaCACAAAT---------------AGAATCCTAACCTGTTTTAAGTACATTtgggctgtatattttatatactttatattttactgagt i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142770598 146 - 204313951 TTGTGCTGTGTGCTGTGTCACATATAGAGACGAATTAGATGTGAGTCTGTCCTG-AGGAGCTTAAAACACAAATAG-------TAAGAAAGAATCCTAACCAGTCTTGAGTACAGTTGAGCATTATATTTTATGTACTTTATATTTTGCTGAGT i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2169087 139 + 10068113 TTGTGCTGAGTGCTGTGTCAGATAGAGAGATGAATTAGATGTGAGTCTGTCCT----GAGCTTAAAACACAAAC-----------AGAAAGAATCCTAACTTGTCTTAAGTACAGTTGAGtattatattttatatactttatattttaCTGAGT i saiBol1.JH378186 C 0 C 0 s aotNan1.NW_018501968v1 1106166 143 - 2246441 TTGTGCTGAGTGCTGTGTCAAATATAGAGATGAATTAGATGTGAGTCTTTCCT----GAGCTTAAAACACAAATAG-------TAAGAAAGAATCCTAACCTGTCTTAAGTACAGTTGAGCATTATATTTTATATACTCTATATTTTACTGAGT i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 697957 147 - 940639 TTGTTCCCAGTACTGTAATGGTTACAGAGAAGAGTTAGATTTGAGTCTATCCTGAAGGAGCTTAAAAGGCAAATAG-------TAATAAGGAATCCTAACCTCTGTTAAACAGATTTGAGCTTTATgttttatatgctttgtatctgattgagt i proCoq1.NW_012152163v1 C 0 C 0 s otoGar3.GL873522 1196970 107 + 48283576 TTTCGCTGGGTGCTATGATGGATACAGAGATGAGTTAGATGTG------------AGGAGCTTAAAAGGTAAAGAG-------TAATAAAGAATCCTAACCTTTATTAAACACATTTGA-----------------CTTCATA----------- i otoGar3.GL873522 C 0 C 0 s mm10.chr13 65955489 126 - 120421639 CTGCAATGGCCACCCTGCC--TTGCAGGGAGGAGTTAACTGTGAGCCTGTCCCAAAAGA-CTTGAAAGATAGAGAGAGTATTAAAGAAAAAAATCCTACCTTCTTTTAGGCATTCTGGA--------TTTTATGAAT----------------- i mm10.chr13 C 0 C 0 s canFam3.chr4 37134207 129 + 88276631 TTGCCCTGGGTGCTGTGTTAGATACAGAGATGAATTAGATGTG--------CTGAAGGAGCTTAAAGGACACATGG-------taataaagaatcctaacctccgttgagcaactttgagccagacaccttata----------tttactgagt i canFam3.chr4 C 0 C 0 e cebCap1.NW_016107999v1 25072 2080 - 709587 M e dasNov3.JH562710 215812 321 - 960158 I a score=32955.000000 s hg38.chr5_KI270795v1_alt 13565 3 + 131892 cct s gorGor5.CYUI01015413v1 1622219 3 + 3967317 cct i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4473915 3 + 163208435 cct i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5707001 3 - 180051392 cct i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5898795 3 - 181584905 cct i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 927866 3 - 16193990 cct i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1744862 3 - 21434487 cct i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4713753 3 - 82825804 cct i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 209011 3 + 2521317 cct i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1700202 3 - 2415367 cct i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142770744 3 - 204313951 CCT i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2169226 3 + 10068113 CCT i saiBol1.JH378186 C 0 C 0 s aotNan1.NW_018501968v1 1106309 3 - 2246441 CCT i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 698104 3 - 940639 cct i proCoq1.NW_012152163v1 C 0 C 0 s mm10.chr13 65955615 3 - 120421639 TCT i mm10.chr13 C 0 C 0 s canFam3.chr4 37134336 3 + 88276631 cct i canFam3.chr4 C 0 I 315 e cebCap1.NW_016107999v1 25072 2080 - 709587 M e otoGar3.GL873522 1197077 0 + 48283576 C e dasNov3.JH562710 215812 321 - 960158 I e panPan2.chr5 5524646 0 - 183735486 C e panTro5.chr5 5262254 0 - 181907262 C a score=993629.000000 s hg38.chr5_KI270795v1_alt 13568 125 + 131892 tacagaaattct-agg-----ggttgatgatttgcttctcatttgacagatgaggatctgagggt--gagaggttaCATCAGTAGTCAGCTAGTGTGTGCTAGAA---CTGGATGCACCTTGAATTATGGCTAATT s gorGor5.CYUI01015413v1 1622222 123 + 3967317 tacagaaattct-agg-----ggttgatggtt-gcttctcatttgacagatgaggatctgagggt--gagaggttaCATCAATAGTCAGCTAGTGTGTGCTAGAA---CTGGATGCACCT-GAATTATGGCTAATT i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4473918 125 + 163208435 tatagaaattct-agg-----ggttgatggtttgcttctcatttgacagatgaggatctgagggt--gagaggttacatcagtagtcagctagtgtgtgctagaa---ctggatgcaccttgaattatggctaatt i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5707004 125 - 180051392 tacagaaattct-agg-----agttgatggtttgcttctcatttgacagatgaggatctgagggt--gagaggttaCATCAGTAGTCAGCTAGTGTTTGCTGGAA---CTGGATGCACCTTGAATTATGACTAATT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5898798 125 - 181584905 tacagaaattct-agg-----agttgatggtttgcttctcatttgacagatgaggatctgagggt--gagaggttaCATCAGTAGTCAGCTAGTGTTTGCTGGAA---CTGGATGCACCTTGAATTATGACTAATT i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 927869 125 - 16193990 tacagaaattct-agg-----agttgatggtttgcttctcatttgacagatgaggatctgagggt--gagaggttaCATCAGTAGTCAGCTAGTGTTTGCTGGAA---CTGGATGCACCTTGAATTATGACTAATT i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1744865 125 - 21434487 tacagaaattct-agg-----agttgatggtttgcttctcatttgacagatgaggatctgagggt--gagaggttaCATCAGTAGTCAACTAGTGTTTGCTAGAA---CTAGATGCACCTTGAATTATGACTAATT i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4713756 125 - 82825804 tacagaaattct-agg-----agttgatggtttgcttctcatttgacagatgaggatctgagggt--gagaggttaCATCAGTAGTCAGCTAGTGTTTGCTAGAA---CTGGATGCACCTTGAATTATGACTAATT i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 209014 125 + 2521317 tacagaaattct-agg-----agttgatggtttgcttctcatttgacagatgaggatctgagggt--gagaggttaCATCAGTAGTCAGCTAGTGTTTGCTAGAA---CTGGATGCACCTTGAATTATGACTAATT i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1700205 125 - 2415367 tacagaaattct-agg-----ggttgatggtttgcttctcatttgacagatgaggatctgagggt--gagaggttaCATCAGTAGTCAGCTAGTGTTTGCTAGAA---CTGGATGCACCTTGAATTATGACTAATT i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142770747 123 - 204313951 TACAGATATTCT-AGGGGGTTGGTTGATGGTTTGCGTCTCATTTGACAGATGAG-------AGGT--GAGAGGTTACATCAGAAGTCAGCTAGTGTGTGCTAGAA---CTGGATGCACCTTGAATTATGGCTAATT i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2169229 123 + 10068113 TACAGAAATTCT-AGGGGGTTGGTTGATGGTTTGCTTCTCATTTGACAGATGAG-------AGGT--GAGAAGTTACATCAGAAGTCAGCCAGTGTGTGCTAGAA---CTGGGTGCACCTTTAATTAtggctaatt i saiBol1.JH378186 C 0 C 0 s aotNan1.NW_018501968v1 1106312 123 - 2246441 TACAGAAATTCT-AGGGGGTTGGTTGATGGTTTTCTTCTCATTTGACAGATGAG-------AGGT--GAAAGGTTACATCAGAAGTCAGCTAGTGTGTTCTAGAA---CTGGATGCACCTTGAATTAtggctaatt i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 698107 125 - 940639 catagaaattctcagg-----agttgatggtatgtttcccatttgacagatgaggatctgaggtt--gagaaattaagtcactagtcAGCTGG-GGGCACTAGAA---CTGGATGCACCTTGAATTGAggctaatt i proCoq1.NW_012152163v1 C 0 I 95 s otoGar3.GL873522 1197077 121 + 48283576 ---AGGACTTCTCAGG-----GATTGATGGTATGTTTCCCATTTAACAAATGAGGGTCTGAGGTT--GAGAG--TAAGTCATTAGTCAGCTGGTGGGCACTAGAA---CAGGATGCGCCTTGAAGCATGGCTCATT i otoGar3.GL873522 C 0 C 0 s mm10.chr13 65955618 116 - 120421639 TAC----------TGA-----TACTGATTATACATTTTTCTGTTGATCCTGAGGGAACTGAGGCTTGTAAACATTCAATTATTAGTCAGCCAGC-----CCAGGATACTTTGATGCACCTTGAATTGTGGCTAATT i mm10.chr13 C 0 C 0 e cebCap1.NW_016107999v1 25072 2080 - 709587 M e canFam3.chr4 37134339 315 + 88276631 I e dasNov3.JH562710 215812 321 - 960158 I e panPan2.chr5 5524646 0 - 183735486 C e panTro5.chr5 5262254 0 - 181907262 C a score=30535.000000 s hg38.chr5_KI270795v1_alt 13693 5 + 131892 CATAC s gorGor5.CYUI01015413v1 1622345 5 + 3967317 CATAC i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4474043 5 + 163208435 catac i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5707129 5 - 180051392 CATAC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5898923 5 - 181584905 CATAC i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 927994 5 - 16193990 CATAC i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1744990 5 - 21434487 CATAC i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4713881 5 - 82825804 CATAC i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 209139 5 + 2521317 CATAC i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1700330 5 - 2415367 TATAC i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142770870 5 - 204313951 TGTAC i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2169352 5 + 10068113 tgtac i saiBol1.JH378186 C 0 C 0 s aotNan1.NW_018501968v1 1106435 5 - 2246441 tgtac i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1197198 5 + 48283576 TGTAC i otoGar3.GL873522 C 0 C 0 s mm10.chr13 65955734 5 - 120421639 CTCTC i mm10.chr13 C 0 C 0 e cebCap1.NW_016107999v1 25072 2080 - 709587 M e canFam3.chr4 37134339 315 + 88276631 I e proCoq1.NW_012152163v1 698232 95 - 940639 I e dasNov3.JH562710 215812 321 - 960158 I e panPan2.chr5 5524646 0 - 183735486 C e panTro5.chr5 5262254 0 - 181907262 C a score=13937.000000 s hg38.chr5_KI270795v1_alt 13698 3 + 131892 TCC s gorGor5.CYUI01015413v1 1622350 3 + 3967317 TCT i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4474048 3 + 163208435 tct i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5707134 3 - 180051392 CCT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5898928 3 - 181584905 CCT i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 927999 3 - 16193990 CCT i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1744995 3 - 21434487 CCT i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4713886 3 - 82825804 CCT i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 209144 3 + 2521317 CCT i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1700335 3 - 2415367 CCT i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142770875 3 - 204313951 ttt i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2169357 3 + 10068113 ttt i saiBol1.JH378186 C 0 C 0 s aotNan1.NW_018501968v1 1106440 3 - 2246441 ttt i aotNan1.NW_018501968v1 C 0 C 0 s mm10.chr13 65955739 3 - 120421639 TCT i mm10.chr13 C 0 I 491 e cebCap1.NW_016107999v1 25072 2080 - 709587 M e otoGar3.GL873522 1197203 0 + 48283576 C e canFam3.chr4 37134339 315 + 88276631 I e proCoq1.NW_012152163v1 698232 95 - 940639 I e dasNov3.JH562710 215812 321 - 960158 I e panPan2.chr5 5524646 0 - 183735486 C e panTro5.chr5 5262254 0 - 181907262 C a score=431589.000000 s hg38.chr5_KI270795v1_alt 13701 81 + 131892 Ctttttttttgtttttcgagac-agagttttgctcttgttgcccaggctgcagtgcaatggtgtgatcttggctcaccgcaa s gorGor5.CYUI01015413v1 1622353 79 + 3967317 Ctttttttt-gttttttgagac-agggttt-gctcttgttgcccaggctgcagtgcaatggtgtgatctcggctcaccgcaa i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4474051 78 + 163208435 Ctttttttt---tttttgagac-agagttttgctcttgttgccgaggctggagtgcaatggtgtgatttcggctcaccgcaa i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5707137 73 - 180051392 Ctttttttt--------gaggc-ggagttttgctcttgttgcccaggctggagtgcaatggcgcgatctcggctcactgcaa i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5898931 73 - 181584905 Ctttttttt--------gaggc-ggagttttgctcttgttgcccaggctggagtgcaatggcgcgatctcggctcactgcaa i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 928002 73 - 16193990 Ctttttttt--------gaggc-ggagttttgctcttgttgcccaggctggagtgcaatggcgcgatctcggctcactgcaa i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1744998 73 - 21434487 Ctttttttt--------gaggc-ggagttttgctcttgttgcccaggctggagtgcaatggcgcgatctcggctcactgcaa i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4713889 73 - 82825804 Ctttttttt--------gaggc-ggagttttgctcttgttgcccaggctggagtgcaatggcgcgatctcggctcactgcaa i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 209147 73 + 2521317 Ctttttttt--------gaggc-ggagttttgcccttgttgcccaggctggagtgcaatggcgcgatctcggctcactgcaa i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1700338 73 - 2415367 Ctttttttt--------gaggc-agagttttgctcttgttgcccaggctggagtacaatggcgcgatctcggctcaccgcaa i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142770878 72 - 204313951 ttt--tttt--------gagacaagagtttcgcccttgttgcttaggctggagtacaatggcacgatctcggcttaccacag i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2169360 73 + 10068113 ttttctttt--------gagac-agagtttcgctcttgttgcttaggctggagtacaatggcgtgatcttggcttaccacaa i saiBol1.JH378186 C 0 C 0 s aotNan1.NW_018501968v1 1106443 73 - 2246441 ttttttttt--------gagac-agacttttgctcttgttgcttaggctggagtacaatggcatgatctcggcttaccacaa i aotNan1.NW_018501968v1 C 0 C 0 e cebCap1.NW_016107999v1 25072 2080 - 709587 M e mm10.chr13 65955742 491 - 120421639 I e otoGar3.GL873522 1197203 0 + 48283576 C e canFam3.chr4 37134339 315 + 88276631 I e proCoq1.NW_012152163v1 698232 95 - 940639 I e dasNov3.JH562710 215812 321 - 960158 I e panPan2.chr5 5524646 0 - 183735486 C e panTro5.chr5 5262254 0 - 181907262 C a score=854088.000000 s hg38.chr5_KI270795v1_alt 13782 105 + 131892 cctct-gcctccggggtt-aagcgattctcctgcctcagcctcccaagtagctgggattagaggcatgtgccaccacacctggctaattttgtattttttgtagttt s panTro5.chr5 5262254 106 - 181907262 cctct-gcctccagggttcaagcgattctcctgcctcagcctcccaagtagctgggattacaggcatgtgccaccacacccggctaattttgtattttttgtagttt i panTro5.chr5 C 0 C 0 s panPan2.chr5 5524646 106 - 183735486 cctct-gcctccagggttcaagcgattctcctgcctcagcctcccaagtagctgggattagaggcatgtgccaccacacccggctaattttgtattttttgtagttt i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1622432 106 + 3967317 cctct-gcctccggggttcaagtgattctcctgcctcagcctcccaagtagctgggattagaggcgtgtgccaccacacccggctaattttgtatcttttgtagttt i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4474129 106 + 163208435 cttct-gcctcctgggttcaagcgattcgcctgcctcggcctcccaagtagctgcaattagaggcatgcgccaccacacccggctaattttgtattttttgtagttt i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5707210 106 - 180051392 ctttc-gcctcctggattcaagctattcttctgccttagcctcccgagtagctgggattagaggcgtgccccaccacacccgtctaattttgtattttttgtagttt i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5899004 106 - 181584905 ctttc-gcctcctggattcaagctattcttctgccttagcctcccgagtagctgggattagaggcgtgccccaccacacctggctaattttgtattttttgtagttt i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 928075 106 - 16193990 ctttc-gcctcctggattcaagctattcttctgccttagcctcccgagtagctgggattagaggcgtgccccaccacacctggctaattttgtattttttgtagttt i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1745071 106 - 21434487 ctttc-gcctcctggattcaagctattcttctgccttagcctcccgagtagctgggattagaggcgtgccccaccacacccggctaattttgtattttttgtagttt i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4713962 106 - 82825804 ctttc-acctcccggattcaagctattctcctgccttagcctcccgagtagctgggattagaggcatgccccaccacacccggctaattttgtattttttgtagttt i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 209220 106 + 2521317 ctttc-gcctcctggattcaagctattcttctgccttagcctcccgagtagctgggattagaggcgtgccccaccacacccggctaattttgtattttttgtagttt i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1700411 106 - 2415367 cctcc-acctcccggattcaagctattctcctgccatagcctcccgagtagctgggattagaggcatgccccaccacacccagctaattttgtattttttgtagttt i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142770950 102 - 204313951 cctcc-gcctcctaggttcaagctattctcctgcctcagcctcccaagtagctgggattacaggcatgggccaccacgcctggctaattttgtattttttttt---- i calJac3.chr2 C 0 I 140 s saiBol1.JH378186 2169433 107 + 10068113 cctccggcctcctaggttcaagctattctcctgcctcagcctcccaagtagctgggattacaggcatgtgccaccatgcctggctaattttgtatttttaatagaga i saiBol1.JH378186 C 0 I 1 s aotNan1.NW_018501968v1 1106516 106 - 2246441 cctct-gcctcctaggttcaagctattctcctgcctcagcctcccaagtagctgggattacaggcatgtgccaccatgcctggctaattttgtatttttaatagaga i aotNan1.NW_018501968v1 C 0 I 1 e cebCap1.NW_016107999v1 25072 2080 - 709587 M e mm10.chr13 65955742 491 - 120421639 I e otoGar3.GL873522 1197203 0 + 48283576 C e canFam3.chr4 37134339 315 + 88276631 I e proCoq1.NW_012152163v1 698232 95 - 940639 I e dasNov3.JH562710 215812 321 - 960158 I a score=493640.000000 s hg38.chr5_KI270795v1_alt 13887 55 + 131892 agggtttctccatgttggtcaggctggtctccaactcccaacctcaggtgattag s panTro5.chr5 5262360 55 - 181907262 agggtttctccatgttggtcaggctggtctccaactcccgacctcaggtgattag i panTro5.chr5 C 0 C 0 s panPan2.chr5 5524752 55 - 183735486 agggtttctccatgttggtcaggctggtctccaactcccgacctcaggtgattag i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1622538 55 + 3967317 agggtttctccgtgttggtcaggctggtctccaactcccgacctcaggtgattag i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4474235 55 + 163208435 agggtttctccatgttggtcaggctggtctccaactcccgacctcaggtgatccg i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5707316 55 - 180051392 agagtttctccatgttggtcaggctggtctccaactcccaacctcaggtgatcca i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5899110 55 - 181584905 agagtttctccatgttggtcaggctggtctccaactcccaacctcaggtgatcca i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 928181 55 - 16193990 agagtttcttcatgttggtcaggctggtctccaactcccaacctcaggtgatcca i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1745177 55 - 21434487 agagtttctccatgttggtcaggctggtctccaactcccaacctcaggtgatcca i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4714068 55 - 82825804 agagtttctccatgttggtcaggctggtctccaactcccaacctcaggtgatcca i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 209326 55 + 2521317 agagtttctccatgttggtcaggctggtctccaactcccaacctcaggtgatcca i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1700517 55 - 2415367 agggtttctccatgttggtcaggctggtctccaactcccaacctcaggtgatcca i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142771192 55 - 204313951 agggtttctccgtgttgatcaggctggtctcaaactcccgacctcaggtgatccg i calJac3.chr2 I 140 C 0 s saiBol1.JH378186 2169541 55 + 10068113 agggtttctccatgttggtcaggttggtttcaaactcctgacctcaggtgatccg i saiBol1.JH378186 I 1 C 0 s aotNan1.NW_018501968v1 1106623 55 - 2246441 agggtttctccatgttgatcaggcgggtctcaaactcccgacctcaggtgatccg i aotNan1.NW_018501968v1 I 1 C 0 e cebCap1.NW_016107999v1 25072 2080 - 709587 M e mm10.chr13 65955742 491 - 120421639 I e otoGar3.GL873522 1197203 0 + 48283576 C e canFam3.chr4 37134339 315 + 88276631 I e proCoq1.NW_012152163v1 698232 95 - 940639 I e dasNov3.JH562710 215812 321 - 960158 I a score=22035.000000 s hg38.chr5_KI270795v1_alt 13942 2 + 131892 cc s panTro5.chr5 5262415 2 - 181907262 cc i panTro5.chr5 C 0 C 0 s panPan2.chr5 5524807 2 - 183735486 cc i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1622593 2 + 3967317 cc i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4474290 2 + 163208435 cc i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5707371 2 - 180051392 cc i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5899165 2 - 181584905 cc i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 928236 2 - 16193990 cc i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1745232 2 - 21434487 cc i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4714123 2 - 82825804 cc i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 209381 2 + 2521317 cc i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1700572 2 - 2415367 cc i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142771247 2 - 204313951 cc i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2169596 2 + 10068113 cc i saiBol1.JH378186 C 0 C 0 s aotNan1.NW_018501968v1 1106678 2 - 2246441 cc i aotNan1.NW_018501968v1 C 0 I 41 s canFam3.chr4 37134654 2 + 88276631 CT i canFam3.chr4 I 315 C 0 e cebCap1.NW_016107999v1 25072 2080 - 709587 M e mm10.chr13 65955742 491 - 120421639 I e otoGar3.GL873522 1197203 0 + 48283576 C e proCoq1.NW_012152163v1 698232 95 - 940639 I e dasNov3.JH562710 215812 321 - 960158 I a score=57322.000000 s hg38.chr5_KI270795v1_alt 13944 12 + 131892 cgacct----------------------------------------------ctggct s panTro5.chr5 5262417 12 - 181907262 cgacct----------------------------------------------ctggct i panTro5.chr5 C 0 C 0 s panPan2.chr5 5524809 12 - 183735486 cgacct----------------------------------------------ctggct i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1622595 12 + 3967317 cgacct----------------------------------------------ctggct i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4474292 58 + 163208435 cgcctcggccacccaaagtgctgggattacaggcgtgaaccaccgtgcccAActggct i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5707373 57 - 180051392 cacctc-ggctcccaaagtgctgggattacaggcgttaaccaccgcacccAActggct i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5899167 57 - 181584905 cacctc-ggctcccaaagtgctgggattacacgcgtgaaccaccgcacccAActggct i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 928238 57 - 16193990 cacctc-ggctcccaaagtgctgggattacaggcgtgaaccaccgcacccAActggct i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1745234 57 - 21434487 cacctc-ggctcccaaagtgctgggattacaggcgtgaaccaccgcacccAActggct i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4714125 57 - 82825804 cacctc-ggctcccgaagtgctggggttacaggcgtgaaccaccgcAGCCAActggct i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 209383 57 + 2521317 cacctc-ggctcccaaagtgctgggattacaggcgtgaaccaccgcacccAActggct i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1700574 57 - 2415367 cacctc-ggctcccaaagtgctgggattacaggtgtgaaccaccgcgccAAActggct i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142771249 11 - 204313951 ---------ttcct--------------------------------------cgggct i calJac3.chr2 C 0 I 30 s saiBol1.JH378186 2169598 11 + 10068113 ---------ttcct--------------------------------------tgacct i saiBol1.JH378186 C 0 I 5 s canFam3.chr4 37134656 12 + 88276631 -----------------------------------TGAATT-----------Atggct i canFam3.chr4 C 0 C 0 e cebCap1.NW_016107999v1 25072 2080 - 709587 M e mm10.chr13 65955742 491 - 120421639 I e otoGar3.GL873522 1197203 0 + 48283576 C e proCoq1.NW_012152163v1 698232 95 - 940639 I e dasNov3.JH562710 215812 321 - 960158 I e aotNan1.NW_018501968v1 1106680 41 - 2246441 I a score=46759.000000 s hg38.chr5_KI270795v1_alt 13956 7 + 131892 aattcgt s panTro5.chr5 5262429 7 - 181907262 aattcgt i panTro5.chr5 C 0 C 0 s panPan2.chr5 5524821 7 - 183735486 aattcgt i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1622607 7 + 3967317 aattcgt i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4474350 7 + 163208435 aatttgt i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5707430 7 - 180051392 aattcgt i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5899224 7 - 181584905 aattcgt i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 928295 7 - 16193990 aattcgt i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1745291 7 - 21434487 aattcgt i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4714182 7 - 82825804 aattcat i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 209440 7 + 2521317 aattcgt i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1700631 7 - 2415367 aattcgt i colAng1.NW_012115755v1 C 0 C 0 s saiBol1.JH378186 2169614 7 + 10068113 aatgctg i saiBol1.JH378186 I 5 I 18 s canFam3.chr4 37134668 7 + 88276631 aatttgt i canFam3.chr4 C 0 C 0 e cebCap1.NW_016107999v1 25072 2080 - 709587 M e mm10.chr13 65955742 491 - 120421639 I e calJac3.chr2 142771260 30 - 204313951 I e otoGar3.GL873522 1197203 0 + 48283576 C e proCoq1.NW_012152163v1 698232 95 - 940639 I e dasNov3.JH562710 215812 321 - 960158 I e aotNan1.NW_018501968v1 1106680 41 - 2246441 I a score=10920.000000 s hg38.chr5_KI270795v1_alt 13963 1 + 131892 a s panTro5.chr5 5262436 1 - 181907262 a i panTro5.chr5 C 0 C 0 s panPan2.chr5 5524828 1 - 183735486 a i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1622614 1 + 3967317 a i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4474357 1 + 163208435 a i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5707437 1 - 180051392 a i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5899231 1 - 181584905 a i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 928302 1 - 16193990 a i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1745298 1 - 21434487 a i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4714189 1 - 82825804 a i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 209447 1 + 2521317 a i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1700638 1 - 2415367 a i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142771290 1 - 204313951 a i calJac3.chr2 I 30 C 0 s saiBol1.JH378186 2169639 1 + 10068113 a i saiBol1.JH378186 I 18 C 0 s aotNan1.NW_018501968v1 1106721 1 - 2246441 a i aotNan1.NW_018501968v1 I 41 C 0 s canFam3.chr4 37134675 1 + 88276631 a i canFam3.chr4 C 0 C 0 e cebCap1.NW_016107999v1 25072 2080 - 709587 M e mm10.chr13 65955742 491 - 120421639 I e otoGar3.GL873522 1197203 0 + 48283576 C e proCoq1.NW_012152163v1 698232 95 - 940639 I e dasNov3.JH562710 215812 321 - 960158 I a score=289723.000000 s hg38.chr5_KI270795v1_alt 13964 28 + 131892 ctctt--aaagtttcaactgaaatatcact s panTro5.chr5 5262437 28 - 181907262 ctctt--aaagtttcaactgaaatatcact i panTro5.chr5 C 0 C 0 s panPan2.chr5 5524829 28 - 183735486 ctctt--aaagtttcaactgaaatatcact i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1622615 28 + 3967317 ctctt--aaagtttcaactgaaatatcact i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4474358 30 + 163208435 ctcttagaaagtttcaacttaaatatcact i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5707438 28 - 180051392 ctctt--aaagtttcaacttaaatatcact i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5899232 28 - 181584905 ctctt--aaagtttcaacttaaatatcact i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 928303 28 - 16193990 ctctt--aaagtttcaacttaaatatcact i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1745299 28 - 21434487 ctctt--aaagtttcaacttaagtatcact i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4714190 28 - 82825804 ctctt--aaagtttcaacttaaatatcact i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 209448 28 + 2521317 ctctt--aaagtttcaacttaagtatcact i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1700639 28 - 2415367 ctctt--aaagtttcaacttaaatatcgct i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142771291 28 - 204313951 cTTtt--aaagtttcaacttaaatatcact i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2169640 29 + 10068113 ctctta-aaagtttcaacttaaatatcact i saiBol1.JH378186 C 0 C 0 s aotNan1.NW_018501968v1 1106722 28 - 2246441 ctctt--aaagtttcaacttaaatatcact i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1197203 23 + 48283576 CCTTT--AAAGTT-----TTAAATATCACT i otoGar3.GL873522 C 0 C 0 s canFam3.chr4 37134676 28 + 88276631 cccgt--aaagtctctccttaaatatcact i canFam3.chr4 C 0 C 0 e cebCap1.NW_016107999v1 25072 2080 - 709587 M e mm10.chr13 65955742 491 - 120421639 I e proCoq1.NW_012152163v1 698232 95 - 940639 I e dasNov3.JH562710 215812 321 - 960158 I a score=431346.000000 s hg38.chr5_KI270795v1_alt 13992 46 + 131892 ttgccttca-gggaagc----tcccccgc-----taccccaaggttagaggtaggt s panTro5.chr5 5262465 46 - 181907262 ttcccttca-gggaagc----tcccccgc-----taccccaaggttagaggtaggt i panTro5.chr5 C 0 C 0 s panPan2.chr5 5524857 46 - 183735486 ttcccttca-gggaagc----tcccccgc-----taccccaaggttagaggtaggt i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1622643 46 + 3967317 ttcccttca-gggaagc----tcccccgc-----taccccaaggttagaggtaggt i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4474388 46 + 163208435 ttcccttca-gggaagc----tctcccgc-----tgccccaaggttagaggtaggt i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5707466 47 - 180051392 ttcccttcaggggaagc----tctcccgc-----taccccaaggttagaggtaggt i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5899260 47 - 181584905 ttcccttcaggggaagc----tctcccgc-----taccccaaggttagaggtaggt i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 928331 47 - 16193990 ttcccttcaggggaagc----tctcctgc-----taccccaaggttagaggtaggt i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1745327 46 - 21434487 ttcccttca-gggaagc----tctcccgc-----taccccaaggttagaggtaggt i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4714218 47 - 82825804 ttcccttcaggggaagc----tctcctgc-----taccccaaggttagaggtaggt i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 209476 46 + 2521317 ttcccttca-gggaagc----tctcccgc-----taccccaaggttagaggtaggt i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1700667 46 - 2415367 ttcccttca-gggaagc----tctcccgc-----taccccagggttagaggtaggt i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142771319 46 - 204313951 ttttcttca-gggaagc----ttccccgc-----taccccaaggttagaggtaggt i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2169669 46 + 10068113 ttcccttca-gggaagc----ttccctgc-----taccccaaggttagaggtaggt i saiBol1.JH378186 C 0 C 0 s aotNan1.NW_018501968v1 1106750 46 - 2246441 ttcccttca-gggaagt----ttccctgc-----taccccaaggttagaggtaggt i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1197226 53 + 48283576 CTGCTTTTG-GGAAAGCCA--TCCCCAACCCTTATCCCCCCAGATTAGAGTTAGGT i otoGar3.GL873522 C 0 C 0 s canFam3.chr4 37134704 46 + 88276631 ttctctcca-gggaagccatcttcatcag-----tttcctacctttccaggt---- i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 216133 44 - 960158 tcaccatta-ccaaaac----ttttccat-----tatcccaa-atagaagctctg- i dasNov3.JH562710 I 321 C 0 e cebCap1.NW_016107999v1 25072 2080 - 709587 M e mm10.chr13 65955742 491 - 120421639 I e proCoq1.NW_012152163v1 698232 95 - 940639 I a score=159000.000000 s hg38.chr5_KI270795v1_alt 14038 21 + 131892 ----tagaggcgtattttatatact s panTro5.chr5 5262511 21 - 181907262 ----tagaggcttattttatatact i panTro5.chr5 C 0 C 0 s panPan2.chr5 5524903 21 - 183735486 ----tagaggcttattttatatact i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1622689 21 + 3967317 ----tagaggcttattttatatact i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4474434 21 + 163208435 ----tagaggcttattttatatact i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5707513 21 - 180051392 ----tagaggcttactttatgtact i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5899307 21 - 181584905 ----tagaggcttactttatgtact i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 928378 21 - 16193990 ----tagaggcttactttatgtact i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1745373 21 - 21434487 ----tagaggcttactttatgtact i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4714265 21 - 82825804 ----tagaggcttactttatgtact i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 209522 17 + 2521317 ----tagagg----ctttatgtact i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1700713 21 - 2415367 ----tagaggcttactttatgtact i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142771365 12 - 204313951 ----tagaggcttat---------t i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2169715 12 + 10068113 ----tagaggcttat---------t i saiBol1.JH378186 C 0 C 0 s aotNan1.NW_018501968v1 1106796 12 - 2246441 ----tagaggcttat---------t i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1197279 21 + 48283576 ----TAGAGGTTTATTTTATGTACT i otoGar3.GL873522 C 0 C 0 s mm10.chr13 65956233 18 - 120421639 ----ctgagtcgtttctccagc--- i mm10.chr13 I 491 C 0 s canFam3.chr4 37134750 21 + 88276631 ----tagaagcttattttatgtact i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 216177 25 - 960158 tacAAAGTGGCAAAGTTTATGTACT i dasNov3.JH562710 C 0 C 0 e cebCap1.NW_016107999v1 25072 2080 - 709587 M e proCoq1.NW_012152163v1 698232 95 - 940639 I a score=2696859.000000 s hg38.chr5_KI270795v1_alt 14059 223 + 131892 ttctgtaggaagcac-ttttctttctatattgtaat-tgcatgtttatttgcctgtgtctcc---tgttagactgtgaattccttgatggtagggatggtgtttgc--cttgtttagtgttgaatccctaatgtctagtcctgtacctgctccacgtag-taggatcttagtaaatatttgttctgtaaatgaatgaaACTGTGGAGCTGAAATTCAGGTCTGT----TCAATTC s panTro5.chr5 5262532 223 - 181907262 ttctgtaggaagcac-ttttctttctatattgtaat-tgcatgtttatttgcctgtgtctcc---tgttagactgtgaattccttgatggtagggatggtgtttgc--cttgtttagtgttgaatccctaatgtctagtcctgtacctgctccacatag-taggatcttagtaaatatttgttctgtaaatgaatgaaACTGTGGAGCTGAAATTCAGGTCTGT----TCAATTC i panTro5.chr5 C 0 C 0 s panPan2.chr5 5524924 223 - 183735486 ttctgtaggaagcac-ttttctttctatattgtaat-tgcatgtttatttgcctgtgtctcc---tgttagactgtgaattccttgatggtagggatggtgtttgc--cttgtttagtgttgaatccctaatgtctagtcctgtacctgctccacatag-taggatcttagtaaatatttgttctgtaaatgaatgaaACTGTGGAGCTGAAATTCAGGTCTGT----TCAATTC i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1622710 223 + 3967317 ttctgtaggaagcac-ttttctttctatattgtaat-tgcatgtttatttgcctgtgtctcc---tgttagactgtgaattccttgatggtagggatggtgtttgc--cttgtttagtgttgaatccctaatgtgtagtcctgtacctgctccacatag-taggatcttcgtaaatatttgttctgtaaatgaatgaaACTGTGGAGCTGAAATTCAGGTCTGT----TCAATTC i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4474455 223 + 163208435 ttctgtaggaagcac-ttttctttctatattgtaat-tgcatgtttatttgcccatgtctcc---tgttagactgtgaattccgtgatggtagggatggtgtttgc--cttgtttagtgttgaatccctaatgtctagtcctgtacctgctccacatag-taggatcttagtaaatatttgttctgtaaatgaatgaaACTGTGGAGCTGAAATTCAGGTCTGT----TCAATTC i nomLeu3.chr2 C 0 I 161 s rheMac8.chr6 5707534 221 - 180051392 ttctgtaggaagcac--tttccttctg-gttgtaat-tgcatggttatttgcccatgtctcc---tgttagactgtgaattccatgatggtggggatggtgtttgc--cttgtttagtgttgaatccctaatgtctagtcctgcacctgctccacatag-aaggatcttagtgaatgtttgttctctaaatgaatgaaATTGTGGAGCTGAAATTCAGATCTGT----TTAATTC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5899328 221 - 181584905 ttctgtaggaagcac--tttccttctg-gttgtaat-tgcatggttatttgcccatgtctcc---tgttagactgtgaattccatgatggtggggatggtgtttgc--cttgtttagtgttgaatccctaatgtctagtcctgcacctgctccacatag-aaggatcttagtgaatgtttgttctctaaatgaatgaaATTGTGGAGCTGAAATTCAGATCTGT----TTAATTC i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 928399 221 - 16193990 ttctgtaggaagcac--tttccttctg-gttgtaat-tgcatggttatttgcccatgtctcc---tgttagactgtgaattccatgatggtggggatggtgtttgc--cttgtttagtgttgaatccctaatgtctagtcctgcacctgctccacatag-aaggatcttagtgaatgtttgttctctaaatgaatgaaATTGTGGAGCTGAAATTCAGATCTGT----TTAATTC i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1745394 222 - 21434487 ttctgtaggaagcac--tttccttctgtgttgtaat-tgcatggttatttgcccatgtctcc---tgttagactgtgaattccgtgatggtggggatggtgtttgc--cttgtttagtgttgaatccctaatgtctagtcctgcacctgctccacatag-aaggatcttagtgaatgtttgttctctaaatgaatgaaATTGTGGAGCTGAAATTCAGATCTGT----TTAATTC i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4714286 222 - 82825804 ttctgtaggaagcac--tttccttctgtgttgtaat-tgcatggttatttgtccatgtctcc---tgttagactgtgaattccatgatggtagggatggtgtttgc--cttgtttagtgttgaatccctaatgtctagtcctgcacctgctccacatag-taggatcttagtgaatgtttgttctctaaatgaatgaaATTGTGGAGCTGAAATTCAGATCTGT----TTAATTC i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 209539 222 + 2521317 ttctgtaggaagcac--tttccttctgtgttgtaat-tgcatggttatttgcccatgtctcc---tgttagactgtgaattccgtgatggtggggatggtgtttgc--cttgtttagtgttgaatccctaatgtctagtcctgcacctgctccacatag-aaggatcttagtgaatgtttgttctctaaatgaatgaaATTGTGGAGCTGAAATTCAGATCTGT----TTAATTC i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1700734 222 - 2415367 ttctgtaggaagcac--tttccttctgtgttgtaat-tgcatggttatttgcccatgtctcc---tgttagactgtgaattccacgatggtagggatgttgtttgc--cttgtttagtgttgaatccctaatatctagtgctgcacctgctccacatag-taggatcttggtgaatatttgttctctaaatgaatgaaATTGTGGAGCTGAAATTCAGATCTGT----TTAATTC i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142771377 223 - 204313951 ttctataggaagcac-ttttccttctgtgttgtaat-tgcatgtttatttgcctatgtctcc---tgttggactgtgatttccatgatggtagggacagtgtttgc--tttgcttagtgttgaatccctaatgtctagtcctgtacctgctccatgtag-gaggatcttagtaaatatttgttctctaaatgaatgaaATTGTGGAATTGAAACTCAGGTCTGT----TCAATTG i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2169727 223 + 10068113 ttctataggaagcac-ttttccttctgtattgtaat-tgcgtgtttatttgcccatgtctcc---tgttggactgtgatttccatgatggtagggacagtgtttgc--tttgcttagtgttgaatccctgatgtctagtcctatacctgctccatgtag-taggatcttagtaaatatttgttctctaaatgaatGTAATTGTGGAATTGAAATTCAGATCTGT----TCAATTC i saiBol1.JH378186 C 0 C 0 s aotNan1.NW_018501968v1 1106808 223 - 2246441 ttctataggaagcac-ttttccttctgtattgtaat-tgcatgtttatttgcccatgtctcc---tgttggactgtgatttccatgatggtagggacagtgtttgc--tttgcttagtgttgaatccctaatgtctagtcctgtacctgctccatgtag-taggatcttagtaaatatttgttCTCTAAAAGAATGTAATTGTGGAATTGAAATTCAGGTCTGT----TCAATTC i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 698327 218 - 940639 ttctgttggaagcac-ttctcattctatattgtaat-tgcatgtttactcatgtgtccc-------attagattgtaaattccgtgacagtagggactgtgtttgc--c-tatttactgttgaatccctaatgcctagcccagtacctgctgcacatag-taggatctcaataaatatttgttctctaaatgaataaaATTGTGGAATTGAAATTCAGGTCTGT----TCAATTC i proCoq1.NW_012152163v1 I 95 C 0 s otoGar3.GL873522 1197300 196 + 48283576 --TCGTTGGAagcac-ttttcattctgtattttact-tgcatatttactcgcttatgtc--------ttagatt-------------------agactgtgtttgc--c-tgtttactgttgaatccctaatgtctagccgagtacctgctacacctag-taggatctcattaaatatttcttctctaaataaatgaaATTGTAGAATTGAAATTCAAGTCTGT----TCAATTC i otoGar3.GL873522 C 0 C 0 s mm10.chr13 65956251 215 - 120421639 cccAGGAGGAAGCATTTCTTAATTCTATATTCTAATGTGCACA-----Tcatctcggtttct---cattgcactagcaatttcatggtggagaggactgtgtttgt--attgttttccattgaattgctaatgcct--tcctagtgccagtcttaatag-tggaatttcagtgagcatttg---tataagtaaatgaaAATGTAAAATGAAGAATCAGGGCCAT----GGGGCTC i mm10.chr13 C 0 C 0 s canFam3.chr4 37134771 215 + 88276631 tcctgttggaagcat-ttctcattctatattataat-tacatgtttatttacctatatcttc---cactagactctaaattccatgaatgtagggaccacatatta--ct---------ttgaatccctagtgcctactttaatacctggtacacagagttaggatctcagtaaatatt----ctgtaaatgaatggaGTGTTGGAATTGAAATTCAGGTCTGTGGGCTCTATTC i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 216202 223 - 960158 TACTGTTGGAAGCAC-TTCTCCctctgtattataat-tgtacatttacttgtctctgtctcccattattacactgtaagttcaatgagggtaggaactgtgtttataacttgtttactgttgggtatc----acctagcccaggctctgctacatataa-taggttctcagtaaatact-gttttgtgagtgaatgaaATTGCGGGATTGAAATTCGGTTCTGT----ATGATTC i dasNov3.JH562710 C 0 C 0 e cebCap1.NW_016107999v1 25072 2080 - 709587 M a score=593210.000000 s hg38.chr5_KI270795v1_alt 14282 83 + 131892 TA---GCCTTCCACTATCCCAGGTGAACAATGCAAGACCAAGTGAGATAGGTTCTGTGAGTGGGAGGCCAGGAGTTTGCTGTGAAA- s panTro5.chr5 5262755 83 - 181907262 TA---GCCTTCCACTATCCCAGGTGAACAATGCAAGACCAAGTGAGATAGGTTCTGTGAGTGGGAGGCCAGGAGTTTGCTGTGAAA- i panTro5.chr5 C 0 C 0 s panPan2.chr5 5525147 83 - 183735486 TA---GCCTTCCACTATCCCAGGTGAACAATGCAAGACCAAGTGAGATAGGTTCTGTGAGTGGGAGGCCAGGAGTTTGCTGTGAAA- i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1622933 83 + 3967317 TA---GCCTTCCACTATCCCAGGTGAACAATGCAAGACCAAGTGAGATAGGTTCTGTGAGTGGGAGGCCGGGAGTTTGCTGTGAAA- i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4474839 83 + 163208435 TA---GCCTTCCACTATCCCAGGTGAACAATGCAAGGCCAAGTGAGATAGGTTCTGTGAGTGGGAGGCCAGGAGTCTGCTGTGAAA- i nomLeu3.chr2 I 161 C 0 s rheMac8.chr6 5707755 55 - 180051392 TA---GCCTTCCACTATCCCAGGTGATCAATGTGAGGCCAAGTGAGATATGTTCCGTG----------------------------- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5899549 55 - 181584905 TA---GCCTTCCACTATCCCAGGTGATCAATGTGAGGCCAAGTGAGATATGTTCCGTG----------------------------- i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 928620 55 - 16193990 TA---GCCTTCCACTATCCCAGGTGATCAATGTGAGGCCAAGTGCGATATGTTCCGTG----------------------------- i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1745616 55 - 21434487 TA---GCCTTCCACTATCCCAGGTGATCAATGTGAGGCCAAGTGAGATATGTTCCGTG----------------------------- i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4714508 55 - 82825804 TA---GCCTTCCACTATCCCAGGTGATCAATGCGAGGCCAAGGGAGATATGTTCCGTG----------------------------- i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 209761 55 + 2521317 TA---GCCTTCCACTATCCCAGGTGATCAATGTGAGGCCAAGTGAGATATGTTCCGTG----------------------------- i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1700956 55 - 2415367 TA---GCCTTCCACTATCCCAGGTGATCAATGCGAGGCCAAGTGAGATATGTTCCATG----------------------------- i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142771600 83 - 204313951 CA---GCCCTCCACTATCCCAGGTGAGCAATACAAGGTCGAGTGAGATAGGTTCTGTGAGAGAAAGGCCAGGAGTTTGCTGTGGAA- i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2169950 83 + 10068113 CA---GCCCTCCACTATCCCAGGTGAGCCATGCAAGGTCAAGTGAGATAGGTTCTGTGAGAGAAAGGCCAGGAGTTTGCTGTGGAA- i saiBol1.JH378186 C 0 C 0 s aotNan1.NW_018501968v1 1107031 83 - 2246441 CA---GCCCTCCACTATCCCAGGTGAGCAATGCAAGGTCAAGTGAGATAGGTTCTGTGAGAGAAAGTCCAGGAGTTTGCTGTGGAA- i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 698545 84 - 940639 TAT--TCTTTCTACTACCCCGGGTGAGCAATGCAGAGCAGAGTGAGATAGGTTCTGTGATAGAAAGGCCAGGAGTTTGCTGTGGAA- i proCoq1.NW_012152163v1 C 0 C 0 s otoGar3.GL873522 1197496 83 + 48283576 TAT--TCTTTCTACTACTACAGATGAGCAGTGCAAAACAGAGTTTGATAGGTTATGTGATAG-AAGGCCAGGAGTTTGCAATGGAA- i otoGar3.GL873522 C 0 C 0 s mm10.chr13 65956466 80 - 120421639 --T--GCTCGCTGCTGTGCC-TGTGAGTAATGCAGGGCAGATGGCCATCGCCACTTCGATAGAGAGGGT-GACGTTTGCTGGGAGA- i mm10.chr13 C 0 I 863 s canFam3.chr4 37134986 77 + 88276631 -------TTTCTGCTATTCTCTATGGGCCGTGCAAGGCAGTGTAAAataggttcttga--agagaggctgagagtttgctgtggca- i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 216425 78 - 960158 --TATTCTTTCTACTCTCCCAGGTGAGTAATGCAAGGCAGAGT-------GTTCTGTGATAAAAAGGTTGGGAGTTTGCTATGGAAA i dasNov3.JH562710 C 0 C 0 e cebCap1.NW_016107999v1 25072 2080 - 709587 M a score=65473.000000 s hg38.chr5_KI270795v1_alt 14365 16 + 131892 TTCCATGGAAAGAACA s panTro5.chr5 5262838 16 - 181907262 TTCCACGGAAAGAACA i panTro5.chr5 C 0 C 0 s panPan2.chr5 5525230 16 - 183735486 TTCCACGGAAAGAACA i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1623016 16 + 3967317 TTCCACGGAAAGAACA i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4474922 16 + 163208435 TTCCACGGAAAGAGCA i nomLeu3.chr2 C 0 C 0 s calJac3.chr2 142771683 16 - 204313951 TTCCAAGGAAAGAACA i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2170033 16 + 10068113 TCACAAGGAAAGAACA i saiBol1.JH378186 C 0 C 0 s aotNan1.NW_018501968v1 1107114 16 - 2246441 TTAGAAGGAAAGAACA i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 698629 16 - 940639 TTCCAGGGAAAGAACC i proCoq1.NW_012152163v1 C 0 I 18 s otoGar3.GL873522 1197579 16 + 48283576 TTCCAAGGAAAGAACA i otoGar3.GL873522 C 0 C 0 s canFam3.chr4 37135063 16 + 88276631 tcccaggaaagaaact i canFam3.chr4 C 0 I 2 s dasNov3.JH562710 216503 16 - 960158 TCCCAAGGAAAGGAAT i dasNov3.JH562710 C 0 C 0 e cebCap1.NW_016107999v1 25072 2080 - 709587 M e mm10.chr13 65956546 863 - 120421639 I e cerAty1.NW_012007035v1 1745671 0 - 21434487 C e macNem1.NW_012018466v1 928675 0 - 16193990 C e rheMac8.chr6 5707810 0 - 180051392 C e macFas5.chr6 5899604 0 - 181584905 C e colAng1.NW_012115755v1 1701011 0 - 2415367 C e manLeu1.NW_012103943v1 209816 0 + 2521317 C e chlSab2.chr23 4714563 0 - 82825804 C a score=-30771.000000 s hg38.chr5_KI270795v1_alt 14381 16 + 131892 GACATACTATAT------------GGGG s panTro5.chr5 5262854 16 - 181907262 TACATACTATAT------------GGGG i panTro5.chr5 C 0 C 0 s panPan2.chr5 5525246 16 - 183735486 TACATACTATAT------------GGGG i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1623032 15 + 3967317 TACATACTATAT-------------GGG i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4474938 16 + 163208435 TATATACTATAT------------GGGA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5707810 3 - 180051392 -------------------------GGG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5899604 3 - 181584905 -------------------------GGG i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 928675 3 - 16193990 -------------------------GGG i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1745671 3 - 21434487 -------------------------GGG i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4714563 3 - 82825804 -------------------------GGG i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 209816 3 + 2521317 -------------------------GGG i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1701011 3 - 2415367 -------------------------GGG i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142771699 17 - 204313951 TACATACCATATC-----------GGGG i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2170049 17 + 10068113 TACGTACCATATC-----------AGGG i saiBol1.JH378186 C 0 C 0 s aotNan1.NW_018501968v1 1107130 17 - 2246441 TACATACCATATT-----------GGGG i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1197595 18 + 48283576 ----TATCACATTG------ACTGTGGG i otoGar3.GL873522 C 0 C 0 s canFam3.chr4 37135081 13 + 88276631 -------------g--attgactgtggg i canFam3.chr4 I 2 I 7 s dasNov3.JH562710 216519 20 - 960158 --------ATAATAATATTGATTGTGGG i dasNov3.JH562710 C 0 C 0 e cebCap1.NW_016107999v1 25072 2080 - 709587 M e mm10.chr13 65956546 863 - 120421639 I e proCoq1.NW_012152163v1 698645 18 - 940639 I a score=1470627.000000 s hg38.chr5_KI270795v1_alt 14397 142 + 131892 GGTTGAAGGAGGGAGCTTGTGAGCTTGATCTTGAAAGATGAGCAGAATTTTAAGAATAAGCAAAAGGGAACCACATAACTGACAAAGCAGGTG-TGAGTGAGCATGACTTACTTGGAGAGTGGT---TAGGTCA-GGGTTGTTGGGG s panTro5.chr5 5262870 142 - 181907262 GGTTGAAGGAGGGAGCTTGTGAGCTTGATCTTGAAAGATGAGCAGAATTTTAAGAATAAGTAAAAGGGAACCACATAACTGACAAAGCAGGTG-TGAGTGAGCGTGACTTATTTGGAGAGTGGT---TAGGTCA-GGGTTGTTGGGG i panTro5.chr5 C 0 C 0 s panPan2.chr5 5525262 142 - 183735486 GGTTGAAGGAGGGAGCTTGTGAGCTTGATCTTGAAAGATGAGCAGAATTTTAAGAATAAGCAAAAGGGAACCACATAACTGACAAAGCAGGTG-TGAGTGAGCGTGACTTATTTGGAGAGTGGT---TAGGTCA-GGGTTGTTGGGG i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1623047 143 + 3967317 GGTTGAAGGAGGGAGCTTGTGAGCTTGATCTTGAAAGATGAGCAGAATTTTAAGAATAAGCAAAAGGGAACCACATAACTGACAAAGCAGGTG-TGAGTGAGCATGACTTATTTGGAGAGTGGT---TAGGTCAGGGGTTGTTGGGG i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4474954 142 + 163208435 GGTTGAAGGAGGGAGCTTGTGAGATTGATCTTGAAAGATGAGCAGAATTTTAAGAATAAGCAaaagggaaccacataactgacaaagcaggca-tgagtgagcatgacttatttggagactggt---taggtca-gggttgttgggg i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5707813 142 - 180051392 AGTTGAAGGAGGGAGCTTGTGAACTTTATCTTGAAAGATAAGCAGAATTTGAAGAATAAGCAAAAGGGAACCACATAAGTGAAAAAGCAGGCA-TGAGTGAGCATGACTTATTTGCAGAGTAGT---TCGTTCA-GGGTTGTTGGGG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5899607 142 - 181584905 AGTTGAAGGAGGGAGCTTGTGAACTTTATCTTGAAAGATAAGCAGAATTTGAAGAATAAGCAAAAGGGAACCACATAAGTGAAAAAGCAGGCA-TGAGTGAGCATGACTTATTTGCAGAGTAGT---TCGGTCA-GGGTTGTTGGGG i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 928678 142 - 16193990 AGTTGAAGGAGGGAGCTTGTGAACTTTATCTTGAAAGATAAGCAGAATTTGAAGAATAAGCAaaagggaaccacataagtgaaaaagcaggca-tgagtgagcatgacttatttgcagagtaat---tcggtca-gggttgttgggg i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1745674 142 - 21434487 AGTTGAAGGAGGGAGCTTGTGAACTTTATCTTGAAAGATAAGCAGAATTTGAAGAATAAGCAAAAGGGAACCACATAAGTGAAAAAGCAGGCA-TGAGTGAGCATGACTTATTTGCAGAGTAGT---TCGGTCA-GGGTTGTTGGGG i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4714566 142 - 82825804 AGTTGAAGGAGGGAGCTTGTGAACTTTATCTTGAAAGATAAGCAGAATTTGAAGAATAAGCAAAAGGGAATTACCTAAGTGAAAAAGCAGGCA-TGAGTGAGCACGACTTATTTGCAGAGTAGT---TCGGTCA-GGGTTGTTGGGG i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 209819 141 + 2521317 AGTTGAAGGAGGGAGCTTGTGAACTTTATCTTGAAAGATAAGCAGAATTTGAAGAATAAGCAAAAGGGAACCACATAAGTGAAAAAGCAGGCA-TGAGTGAGCATGACTTATTTGCAGAGTAGT---TCGGTCA-GGGTTGTT-GGG i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1701014 142 - 2415367 AGTTGAAGGAGGGAGCTTGTGAACTTTATCTTGAAAGATGAGCAGGATTTGAAGAATAAGCAAAAGGGAACCACATAAGTGACAAAGCAGGCA-TGAGTGAACATGACTTATTTGCAGAGTAGT---TCGGTCA-GGGTTGTTGGGG i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142771716 118 - 204313951 GGTTGAAGGGGGCAGCTCGTGAGCTTGATC-TGAAAGATGAGCAGAATTTTAAGAAC----------------------TGACAAAGCAGGCA-TGAGTGAGCATGACTTATTTGAAGAGTGGC---TAGGTCA-GGGTTGTT-GGG i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2170066 117 + 10068113 GGTTGAAGGAGGCAGCTCATGAGCTTGATC-TGAAAGATGAGCAGAATTTTAAGAAC----------------------TGACAAAGTA-GCA-TGAGTGAGCATGACTTATTTGAAGAGTGGC---TAGGTCA-GGGTTGTT-GGG i saiBol1.JH378186 C 0 C 0 s aotNan1.NW_018501968v1 1107147 118 - 2246441 GGTTGAAGGAGGCAGCTTGTGAGCTTGATC-TGAAAGATGAGCAGAATTTTAAGAAC----------------------TGACAAAACAGGCG-TGAGTGAGCATGACTTATTTGAAGAGTGGC---TAGGTCA-GGGTTGTT-GGG i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 698663 136 - 940639 GGTTAAAGGAGGCAGCTTCTGAGCTTGATCTTGAAAG------AGAATTTTAAGAATCAGCAAAAGGGAACCACACAATTGGCAAAATAGGTGTTCAA-AAGCATGACTTATTTGGAGAGTAGT---TAGGTCA-GAGTTGTTGGGG i proCoq1.NW_012152163v1 I 18 I 23 s otoGar3.GL873522 1197613 135 + 48283576 GGTTGAAAGAGGGAGCTTCTGAAGTTGATCTTGAAAG------AGAATTTTAAAAGTCAGC-AAAGGGAACTACACACTCAGCAAAACAGGTATTGAGTAAGCATGACTTACTTGGAAAGTAGT---TAGGTCA-GAGGAGTTGGG- i otoGar3.GL873522 C 0 C 0 s canFam3.chr4 37135101 145 + 88276631 gattgaaggaggcagcttctgagcttgaccttgaaagctgagtagaatttaaagaatcagcacaaggcagtcatacaatggacaaaacaggtg-tgaataagcgtattctatatggaaagtagttggtaggtca-aaattgctggga i canFam3.chr4 I 7 C 0 s dasNov3.JH562710 216539 116 - 960158 GGTtggaagaagcagcttctgatcttgaccttaaaagatgagtagaatttTAAGAATCAGC----------------------AAAACAGGCA-TGAATGAGCATGGGTTATGTGGA---TTAC---TAGATCA-TGGTTGCTAGC- i dasNov3.JH562710 C 0 C 0 e cebCap1.NW_016107999v1 25072 2080 - 709587 M e mm10.chr13 65956546 863 - 120421639 I a score=230697.000000 s hg38.chr5_KI270795v1_alt 14539 23 + 131892 GAGTGGTGGCAGATAAGGGAAAT s panTro5.chr5 5263012 23 - 181907262 GAGTGGTGGCAGATAAGGGAAAT i panTro5.chr5 C 0 C 0 s panPan2.chr5 5525404 23 - 183735486 GAGTGGTGGCAGATAAGGGAAAT i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1623190 23 + 3967317 GAGTGGTGGCAGATAAGGGAAAT i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4475096 23 + 163208435 gagtggtggcagataagggaaat i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5707955 23 - 180051392 GCATGCTGGCAGATAAGGGAAAT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5899749 23 - 181584905 GCATGCTGGCAGATAAGGGAAAT i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 928820 23 - 16193990 gcatgctggcagataagggaaat i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1745816 23 - 21434487 GCATGCTGGCAGATAAGGGAAAT i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4714708 23 - 82825804 GCATGCTGGCAGATAAGGGAAAT i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 209960 23 + 2521317 GCATGCTGGCAGATAAGGGAAAT i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1701156 23 - 2415367 ATGTGGTGGCAGATAAGGGAAAT i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142771834 23 - 204313951 GTGTGGTAGCAGACAAGGGAAAT i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2170183 23 + 10068113 GTGTGGTAGCAGATAAGGGAAAT i saiBol1.JH378186 C 0 C 0 s aotNan1.NW_018501968v1 1107265 23 - 2246441 GTGCGGTAGCAGATAAGGGAAAT i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1197748 23 + 48283576 GAGTGGCGGAAGATAGGGGATAT i otoGar3.GL873522 C 0 I 1 s canFam3.chr4 37135246 18 + 88276631 -----atggatgataaggtatct i canFam3.chr4 C 0 I 1 s dasNov3.JH562710 216655 23 - 960158 AAATGGTGGCAGATGAGGTAGAT i dasNov3.JH562710 C 0 I 1 e cebCap1.NW_016107999v1 25072 2080 - 709587 M e mm10.chr13 65956546 863 - 120421639 I e proCoq1.NW_012152163v1 698799 23 - 940639 I a score=1660471.000000 s hg38.chr5_KI270795v1_alt 14562 141 + 131892 AAGAGAGGGCATGATAATGGGAAGA------TGAAGT-------CTA-----ATTTGGGACCAGATTATAAAAGGCCTTT-ATTTTATGCTTAGTATCTTGGGTTTTATTTTGTAGGCAAT-GGGGATTCTATAACTTTTTAAGAAAAATCTTTTTATTat s panTro5.chr5 5263035 141 - 181907262 AAGAGAGGGCATGATAATGGGAAGA------TGAAGT-------CTA-----ATTTGGGACCAGATTATAAAAGGCCTTT-ATTTTATGCTTAGTGTCTTGGGTTTTATTTTGTAGGCAAT-GGGGAGTCTATAACTTTTTAAGAAAACCCTTTTTATTat i panTro5.chr5 C 0 C 0 s panPan2.chr5 5525427 141 - 183735486 AAGAGAGGGCATGATAATGGGAAGA------TGAAGT-------CTA-----ATTTGGGACCAGATTATAAAAGGCCTTT-ATTTTATGCTTAGTGTCTTGGGTTTTATTTTGTAGGCAAT-GGGGATTCTATAACTTTTTAAGAAAACCCTTTTTATTat i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1623213 140 + 3967317 AAGAGAGGGCATGATAATGGGAAGA------TGAAGT-------CTA-----ATTTGGGACCAGATTATAAAA-GCCTTT-ATTTTATGCTTAGTATGTTGGGTTTTATTTTGTAGGCAAT-GGGGATTCTATAACTTTTTAAGAAAAacctttttattat i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4475119 141 + 163208435 aagagagggcatgataatgggaaga------tgaagt-------cta-----atttgggaccagattataaaaggccttt-attttatgcttagtatcttgggttttattttgtaggcaat-ggggaTTCTATAACTTTTGAAGAAAAACCTTTTTATTat i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5707978 141 - 180051392 AAGAGAGGGCATGATAATGGGAAGA------TGAAGT-------CTG-----ATTTGGGACCAGATTATAAAAGGCCTTT-ATTTTATGCGTAGTATCTTGGATTTTATTTTGTAGGCAAT-GGGGATTCTATAATTTTTTAAGAAAAacctttttattat i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5899772 141 - 181584905 AAGAGAGGTCATGATAATGGGAAGA------TGAAGT-------CTG-----ATTTGGGACCAGATTATAAAAGGCCTTT-ATTTTATGCCTAGTATCTTGGATTTTATTTTGTAGGCAAT-GGGGATTCTATAATTTTTTAAGAAAAacctttttattat i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 928843 141 - 16193990 aagagagggcatgataatgggaaga------tgaagt-------ctg-----atttgggaccagattataaaaggccttt-attttatgcctagtatcttggattttattttgtaggcaat-ggggaTTCTATAATTTTTTAAGAAAAacctttttattgt i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1745839 141 - 21434487 AAGAGAGGGCATGATAATGGGAAGA------TGAAGT-------CTG-----ATTTGGGACCAGGTTATAAAAGGCCTTT-ATTTTATGCCTAGTATCTTGGATTTTCTTTTGTAGGCAAT-GGGGATTCTATAAttttttaagaaaaacctttttgttat i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4714731 141 - 82825804 AAGAGAGGGCATGATAATGGGAAGA------TGAAGT-------CTG-----ATTTGGGACCAGATTATAAAAGGCCTTT-ATTTTATGCCTAGTATCTTGGATTTTATTTTGTAGGCAAT-GGGGATTCTATAATTTTTTAAGAAAAacctttttattat i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 209983 141 + 2521317 AAGAGAGGGCATGATAATGGGAAGA------TGAAGC-------CTG-----ATTTGGGACCAGATTATAAAAGGCCTTT-ATTTTATGCCTAGTATCTTGGATTTTATTTTGTAAGCAAT-GGGGATTCTATAATTTTTTAAGAAAAacctttttattat i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1701179 141 - 2415367 AAGAGAGGGCATGATAATGGGAAGA------TGAAGT-------CTA-----ATTTGGGACCAGATTATAAAAGGCCTTT-ATTTTATGCCTAGTATCTTGGATTTTATTTTGTAGGCAAT-GGGGATTCTATAAttttttaagaaaaacctttttattat i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142771857 142 - 204313951 AAGAGAGGGCATGATAATGGGAAGA------TGAAAT-------CTA-----ATTTGGGAGTGGATTATAAAAGGCCTTTAATTTTATGCTTAGTATCTTGGATTTTATTTTGTAGGCAGT-GAGGATTCCATAACTTTTTAAGAAAaacctttttattat i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2170206 140 + 10068113 A--AGAGGGCATGATAATGGGAAGA------TGAAAT-------CTA-----ATTTCGGACTGGATTATAAAAGACCTTTAATTTTATGCTTAGTATCTTGGATTTTATTTTGTAGGCCAT-GGGGATTCTATAACTTTTTAAGAAAAacttttttattat i saiBol1.JH378186 C 0 I 216 s aotNan1.NW_018501968v1 1107288 142 - 2246441 AAGAGAGGGCATGATAATGGGAAGA------TGAAAT-------CTG-----ATTTGGGACTGGATTATAAAAGGCCTTTAATTTTATGCTTAGTATCTTGGATTTTATTTTGTAGGCAGT-GGGGATTCTATAACTTTTTAAGAAAAAGCTTTTTATTat i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 698822 144 - 940639 AAGAAAGGGCATGATAATGGGAAGA------TAAAAT-------TGAAATATAATTGGGACCAGATTATAAAAGGCCTTGAATTTTATGCTTACTATCTTGGATTTTATTTTGTAGGCAGT-GGGGATTCTATGACTTTTAAAAAAAG---TTTTTATtat i proCoq1.NW_012152163v1 I 23 C 0 s otoGar3.GL873522 1197772 140 + 48283576 AAGAGAGGACGTGATAATGGGAAGG------TAAAGT-------CAAAATGTAATTTTGGACA-ATTATAAAAGGCCTTGAATTTTATGCTTACTATCTTGGATGTTATTTTGTAGGCAGTGGGGGATTCTGTAAC--TTAAAAAAAG-----TTTATTAT i otoGar3.GL873522 I 1 C 0 s canFam3.chr4 37135265 140 + 88276631 aagagagggcctgaaaatgggaagataaagttgaagt-------ata-----atctgggaccagattataaaAGGCTGGA-ATTCTGTGCTTAGCAACTTGAATTTTATTC------AAGT-GGGGATTCTTTAGtttttt-ttaaaagcctttttattag i canFam3.chr4 I 1 I 3 s dasNov3.JH562710 216679 133 - 960158 GAGACAGAGTGTGGTAATGGGAAGG------TAAAGTTGAAATGTTA-----ATTTGAAACCA--------------TGA-ATTCTGTGCTTAGCAGCTTGGATTTTATTCTGTAGGCAGT--AGAATCCCATGAAGTTTTTCttttcatctttttattgt i dasNov3.JH562710 I 1 C 0 e cebCap1.NW_016107999v1 25072 2080 - 709587 M e mm10.chr13 65956546 863 - 120421639 I a score=2315765.000000 s hg38.chr5_KI270795v1_alt 14703 212 + 131892 ---aaaacacagatattgaaaaccacat-aaaataaatgtatagctt-aatgaactcttataggcttaactcttgtgcaaccccgcccaag-ttgagaagtagttc-ttt-ccagccatcccagaagtccatccaggtgttttgtcctaattacaactt-cct-tccacaaaagcaaacactatcctga-cttttatagt--------------gtttcttcatag-tttatctacca s panTro5.chr5 5263176 212 - 181907262 ---aaaacacagatattgaaaaccacat-aaaataaatgtatagctt-aatgaactcttataggcttaactcttgtgcaaccccgcccaag-ttgagaagtacttc-ttt-ccagccatcccagaagtccatccaggtgttttgtcctaattacaactt-cct-tccacaaaagcaaacactatcctga-cttttatagt--------------gtttcttcatag-tttatctacca i panTro5.chr5 C 0 C 0 s panPan2.chr5 5525568 212 - 183735486 ---aaaacacagatattgaaaaccacat-aaaataaatgtatagctt-aatgaactcttataggcttaactcttgtgcaaccccgcccaag-ttgagaagtacttc-ttt-ccagccatcccagaagtccatccaggtgttttgtcctaattacaactt-cct-tccacaaaagcaaacactatcctga-cttttatagt--------------gtttcttcatag-tttatctacca i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1623353 211 + 3967317 ---aaaacacagatattgaaaaccacat-aaaataaatgtatagctt-aatgaactcttataggcttaactattgtgcaa-cccgcccaag-ttgagtagtagttc-ttt-ccagccatcccggaagtccatccaggtgttttgtcctaattacaactt-cct-tccacaaaagcaaacactatcctga-cttttatagt--------------gtttcttcatag-tttatctacca i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4475260 212 + 163208435 ---aaaacacagatattgaaaaccacat-aaaacaaatgtatagctt-aatgaacacttctaggtttaactcttgtgcaaccccgcccaag-ttgagaagtagttc-ttt-ccagccatcccagaattccatccaggtgttttgtcctaattacaactc-cct-tccacaaaagcaaacactatcctga-cttttatagt--------------gtttctttgtag-tttatctacca i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5708119 212 - 180051392 ---aaaacacagatattgaaaaccacat-aacacaaatgtgtagctt-aacgaactcttataggcttaactcttgtgcagccctgctcaag-tcgaggagtagttc-ttt-ccagccaccctagaagtccatccaggtgttttgtcctaattacaactc-cct-tccacaaaagcgaacactatcctga-cttttatggt--------------gattcttcatag-tttttctacca i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5899913 212 - 181584905 ---aaaacacagatattgaaaaccacat-aacacaaatgtgtagctt-aacgaactcttataggcttaactcttgtgcagccctgctcaag-tcgaggagtagttc-ttt-ccagccaccctagaagtccatccaggtgttttgtcctaattacaactc-cct-tccacaaaaacgaacactatcctga-cttttatggt--------------gattctccatag-tttttctacca i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 928984 212 - 16193990 ---aaaacacagatatcgaaaaccacat-aacacaaatgtgtagctt-aacgaacttttataggcttaactcttgtgcagccctgctcaag-tcgaggagtagttc-ttt-ccagccaccctagaagtccatccaggtgttttgtcctaattacaactc-cct-tccacaaaagcgaacactatcctga-cttttatggt--------------gattcttcatag-tttttctacca i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1745980 212 - 21434487 ---aaaacacagatattgaaaaccacat-aacacaaatgtgtagctt-aacgaactcttataggcttaactcttgtgcagccctgctcaag-tcgaggagtagttc-ttt-ccagccaccctagaagtccatccaggtgttttgtcctaattacaactc-cct-tccacaaaagcgaacactatcctga-cttttatggt--------------gattcttcatag-tttttctacca i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4714872 212 - 82825804 ---aaaacacagatatttaaaaccacat-aacacaaatgtgtagctt-aacgaactcttataggcttaactcttgtgcagccctgttcaag-tcgaggagtagttc-ttt-ccagccaccctagaagtccatccaggtgttttgtcctaattacaactc-cct-tccacaaaagcgaacactatcctga-cttttatggt--------------gattcttcatag-tttttctacca i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 210124 212 + 2521317 ---aaaacacagatattgaaaaccacat-aacacaaatgtgtagctt-aacgaactcttataggcttaactcttgtgcagccctgctcaag-tcgaggagtagttc-ttt-ccagccaccctagaagtccatccaggtgttttgtcctaattacaactc-cct-tccacaaaagcgaacactatcctga-cttttatggt--------------gattcttcatag-tttttctacca i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1701320 212 - 2415367 ---aaaacacagatactgaaaaccacat-aacacaaatgtgtacctt-aacgaactcttataggcttaactcttatgcagccctgcccaag-tcgaggagtagttc-ttt-ccagtcatcctaaaagtccatccaggtgttttgtcctaattacaactc-cct-tccacaaaagcgaacactatcctga-cttttatggt--------------gattcttcatag-tttgtctacca i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142771999 209 - 204313951 ---aaaacacagatactgaaaaccacat-aaaacaaatgtatagctt-aataaactcctataagctttattcctgtgcaacccca-ccggc-tcgagaaatagttc-ttt-ccagccaccccaaaagtccgtctgtgt--tttatcctaattacaactc-cct-tccacaaaagtaaacactatcctga-cttttattgt--------------gtttcttcatag-tttatctacca i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2170562 210 + 10068113 ---aaaacacagatactgaaaaccacat-aaagcaattgtatagctt-aatgaactcttacaggctttactcctgtgcaaccccgcccggc-tcgagaaatagttc-ttt-ccagccaccccagaagcctgtctgtgtg-ttttgccctattacagctc-cct-tccacaaaagtaaacactatcctga-ctttgatagt--------------gtttcttcata--tttatctactg i saiBol1.JH378186 I 216 C 0 s aotNan1.NW_018501968v1 1107430 212 - 2246441 ---aaaacacagatattgaaaaccacat-aaaacaaatgtatagctt-aatgaactcttataggctttactcctgtgcagccccacccggc-tcgagaaatagttc-ttt-ccggccaccccagaagtccatctgtgtgttttgtcgtaattaccactc-cct-tccacaaaagtaaacactatcctga-cttgtatagt--------------gtgtcttcatag-tttatctacca i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 698966 209 - 940639 -----aaaagagatattgaaaactacat-aaaacaaatgtataactt-aatgacctattatgtgcttaacacctgtataacccttcctagg-ttgagaaattgttc-ttt-ccagccaccccagaactgcatccatgtg-tttgtcctaatcacaactc-ctt-ccctcaaaagtaaacactaccttga-ttttata-gt--------------gtttcttcatagttttatctacca i proCoq1.NW_012152163v1 C 0 I 728 s otoGar3.GL873522 1197912 199 + 48283576 -----AAAACAG--ATTGACaactgtgtaaaaacagatgtgtagctt-aatgaactataatatatttaaca-ctgcgaaaccct--atagatttgagaaatagttctttt-ccagccaccccagaagcacatccatatgttttgtcctaatcacaactc-att-ccctcaaaaataaacactatcttga-cttttat-gt-----------------------tagtTTTATCTGCCA i otoGar3.GL873522 C 0 C 0 s canFam3.chr4 37135408 202 + 88276631 ---ataaaacatatacagaaagccactt-aaaacaact-tatgcctt-aatgaactgttat-----------ctgtgtaaccccatccagg-tcaagaaatagtaa-tttgctggccatcccagaaatctgtctatgtatttt-tcctagtcataattctctt-tcctcaaaaggagacactatcttga-tttttatagt--------------atttctttatagttttagctacca i canFam3.chr4 I 3 C 0 s dasNov3.JH562710 216812 232 - 960158 aaaatgaaacagataaagaaaatcaaac-aacg-aaatgtgtaacttaaatgaactattgtatgcttaacacc-atgtaaccccacccaag-tcaggaaatagtgc-tttgccagccaccgcagaagtctatctgtgtgctctgtctaaatcacaacac-cctctcttcaaaagtaaccactatcttggccttttacagtcatcattttcttggatttctttatagttttgtttccta i dasNov3.JH562710 C 0 C 0 e cebCap1.NW_016107999v1 25072 2080 - 709587 M e mm10.chr13 65956546 863 - 120421639 I a score=3147605.000000 s hg38.chr5_KI270795v1_alt 14915 334 + 131892 catgtgcagcccctagataccctagttttgctcattA-AAAAAAAAAAAAA-ATTGATATGTGTTTTGTATCTCTTAAATTA----CTCAAA---------AGAAACTTC-------------CGAAAACGtagctgttgaaaaaccagact--gttaacctgtggagattctcccagtttggcttttgctgattccatATGC-T-Gtttatgtgttggactgttgtgtaaagagatgctgcttctcatctgcgatgtggttacccagtagtgtagttc---------------------------------atgtagggaaggcaggataaaattttgat----tct----gtttg---tc-----------agataatgattttgtttcctgctacctccaaagatgagcagttag---gtg--------------------------------------- s panTro5.chr5 5263388 333 - 181907262 catgtgcagcccctagataccctagttttgctcattA-AAAAAAAAAAAAA--TTGGTATGTCTTTTGTATCTCTTAAATTA----CTCAAA---------AGAAACTTC-------------CAAAAACGtagctgttgaaaaaccagact--gttaacctgtggagattctcccagtttggcttttgctgattccatATGC-T-Gtttatgtgttggactgttgtgtaaagagatgctgcttctcatctgccatttggttacccagtagtgtagttc---------------------------------atgtagggaaggcgggataaaattttgat----tct----gtttg---tc-----------agataatgattttgtttcctgctacctccaaagatgagcagttag---gtg--------------------------------------- i panTro5.chr5 C 0 C 0 s panPan2.chr5 5525780 331 - 183735486 catgtgcagcccatagataccctagttttgctcattA-AAAAAAAAAAA----TTGATATGTCTTTTGTATCTCTTAAATTA----CTCAAA---------AGAAACTTC-------------CAAAAACGtagctgttgaaaaaccagact--gttaacctgtggagattctcccaatttggcttttgctgattccatATGC-T-Gtttatgtgttggactgttgtgtaaagagatgctgcttctcatctgcgatttggttacccagtagtgtagttc---------------------------------atgtagggaaggcaggataaaattttgat----tct----gtttg---tc-----------agataatgattttgtttcctgctacctccaaagatgagcagttag---gtg--------------------------------------- i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1623564 335 + 3967317 catgtgcagcccctagataccctagttttgctcattA-AAAAAAAAAAAAAAATTGATATGTGTTTTGTATCTCTTAAATTA----CTCAAA---------AGAAACttc-------------ctaaaacgtagctgttgaaaaaccagact--gttaacctgtggagattctcccagtttggcttttgctgattccgtatgc-t-Gtttatgtgttggactgttgtgtaaagagatgctgcttctcatctgcgatttggttacccagtagtacagttc---------------------------------atgtagggaaggcaggagaaaattttgat----tct----gtttg---tc-----------agataatgattttgtttcctgctacctccaaagatgagcagttag---gtg--------------------------------------- i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4475472 333 + 163208435 catgtgcagcccctagataccctagttttgctcattA-AAAAAAAAA------TTGATATGTCTTTTGTATCTCTTAAATTA----CTCAAA---------AGAAACttc-------------ctaaaacgtagctgttgaaaaaccagact--gttaacctgtggagattctcccagtctgggttttgctgattccatATGC-T-Gtttatgtgttggactgttgtataaagagatgctgcttctcatctgcgatttggttacccagtagtgcagttc---------------------------------atctagggaaggcaggataaaattttgattctctct----gtttg---tc-----------agataatgattttgtttcctgctacgtccaaagatgaccagttag---gtg--------------------------------------- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5708331 330 - 180051392 catgtgcagcccctagataccctagtttTGCTCATTT-AAAAAAAAAA-----TTGATACGTCTTTTGTGTCTCTTAAATTA----CTCAAA---------AGAAACTTG-------------CTAAAACAtagctgctgaaaaaccagact--ggtaacctgtggagattctcccagtttggcttttgctgattccatGTGC-T-GTGTATATGTTGGACTGttgtataaagagatgctgcttcttgtctgcaatttggttacccagtagtgcagttc---------------------------------atctagggaaggcaggataaaattttgat----tct----gtttg---tc-----------agatgatgatttcgtttcctgctgcctccaaagatgaccagttag---gtt--------------------------------------- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5900125 330 - 181584905 catgtgcagcccctagataccctagttttgctcattt-AAAAAAAAAA-----TTGATACGTCTTTTGTGTCTCTTAAATTA----CTCAAA---------AGAAACTTG-------------CTAAAACAtagctgctgaaaaaccagact--ggtaacctgtggagattctcccagtttggcttttgctgattccatGTGC-T-GTGTATATGTTGGACTGttgtataaagagatgctgcttcttgtctgcaatttggttacccagtagtgcagttc---------------------------------atctagggaaggcaggataaaattttgat----tct----gtttg---tc-----------agatgatgatttcgtttcctgctgcctccaaagatgaccagttag---gtt--------------------------------------- i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 929196 330 - 16193990 catgtgcagcccctagataccctagtttTGCTCATTT-AAAAAAAAAA-----TTGATACGTCTTTTGTGTCTCTTAAATTA----CTCAAA---------AGAAACTTG-------------CTAAAACAtagctgctgaaaaaccagact--ggtaacctgtggagattctcccagtttggcttttgctgattccatGTGC-T-GTGTATATGTTGGACTGttgtataaagagatgctgctgcttgtctgcaatttggttacccagtagtgcagttc---------------------------------atctagggaaggcaggataaaattttgat----tct----gtttg---tc-----------agatgatgatttcgtttcctgctgcctccaaagatgaccagttag---gtt--------------------------------------- i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1746192 330 - 21434487 catgtgcagcccctagataccctagtttTGCTCATTT-AAAAAAAAAA-----TTGATACGTCTTTTGTGTCTCTTAAATTA----CTCAAA---------AGAAACTTG-------------CTAAAACAtagctactgaaaaaccagact--ggtaacctgtggagattctcccagtttggcttttgctgattccatGTGC-T-GTGTATATGTTGGACTGttgtataaagagatgctgcttctcgtctgcaatttggttacccagtagtgcagttc---------------------------------atctagggaaggcaggataaaattttgat----tct----gtttg---tc-----------agatgatgatttcgtttcctgctgcctccaaagatgaccagttag---gtt--------------------------------------- i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4715084 330 - 82825804 catgtgcagcccctagataccctagttttgctcattt-AAAAAAAAAT-----TGGATACGTCTTTTGTGTCTCTTAAATTA----CTCAAA---------AGAAACttc-------------ctaaaacatagctgctgaaaaaccagact--ggtaacctgtggagattctcccagtttggcttttgctgattccatgtgc-t-gtttatatgttggactgttgtataaagagatgctgcttctcgtctgcaatttggttacccagtagtgcagttc---------------------------------atctagagaaggcaggataaaattttgat----tct----gtttg---tc-----------agatgatgatttcgtttcctgctgcctccaaagatgaccagttag---gtt--------------------------------------- i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 210336 330 + 2521317 catgtgcagcccctagataccctagttttgctcattt-AAAAAAAAAA-----TTGATACGTCTTTTGTGTCTCTTAAATTA----CTCAAA---------AGAAACTTG-------------CTAAAACAtagctgctgaaaaaccagact--ggtaacctgtggagattctcccagtttggcttttgctgattccatGTGC-T-GTGTATATGTTGGACTGttgtataaagagatgctgcttctcgtctgcaatttggctacccagtagtgcagttc---------------------------------atctagggaaggcaggataaaattttgat----tct----gtttg---tc-----------agatgatgatttcgtttcctgctgcctccaaagatgaccagttag---gtt--------------------------------------- i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1701532 331 - 2415367 catgtgcagcccctagatatcctagttttgctcatttAAAAAAAAAAA-----ttgatatgtcttttgtgtctcttaaatta----ctcaaa---------agaaatttc-------------ctaaaacatagctgctgaaaaaccagact--ggtaacctgtggagattctcccattttggcttttgctgattccatATGC-T-Gtttatatgttggactattgcataaagagatgctgcttctcgtctgcaatttggttacccagtagtgcagttc---------------------------------atctagggaaggcaggataaaattttgat----tct----gtttg---tc-----------agatgatgatttcgtttcctgctgcctccaaagatgaccagttag---gtt--------------------------------------- i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142772208 325 - 204313951 tgtgtgcagctcctagataccctagttttgctcatt--AAAAACAAAT-----TTGATAAGTCTTTTGTGTCTGTTAAATTA----CTCAGA---------AGAAACTTC-------------CTAAAACATAGCTGTTGAAAAACCAGACT--ATTCCTATGTGGAGATGC-TCCCAGTTGGCTTTTGCTGATTCTCTATGC-T-GTTTATTTGTTGCTCTGttttataaagaga---tgcttctcatctgtgatttggttgcccagtagtacagttc---------------------------------atctagggaaggcaggataaaattttgat----tctttccttttg---tc-----------agaaa---atttagtttcctgccacctccaaagaggatcagttag---gt---------------------------------------- i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2170772 328 + 10068113 catgtgcagctcctagataccctagttttgctcatt--AAAAAAAAAA-----AAAATCTGTCTTTTGTGTCTGTTAAATTA----CTCAAA---------AGAAACTTC-------------CTAAAACATAGCTGTTGAGAAACCAGCCT--GTTCCTATGTGGAGATGT-CCCAGTTTGGCTTTTGCCAATTCCATATGC-T-GTTTATTTGTTGCTCTGttttataaagaga---tgcttcttgtctgtgatttggttaccccatagtacagttc---------------------------------atgtggggaaggcaggataacattttgat----tcttcccttttg---tc-----------agataatgatttcgtttcctgccacctccaaagaggatcagttag---gt---------------------------------------- i saiBol1.JH378186 C 0 C 0 s aotNan1.NW_018501968v1 1107642 331 - 2246441 cgtgtgcagctcctagataccctagttttgctcatttAAAAAAAAAAT-----TTGATATGTCTTTTGTGTCTGTTAAATTA----CTCAAA---------AGAAACttc-------------ctaaaacatagctgttgaaaaaccagact--gttcatatgtggagatgctcccagtttggcttttgctgattccatatgc-t-gtttatttgttgctctgttttataaagaga---tgcttctcatctgtgatttggttacccagtagtacagttc---------------------------------atctagggaaggcaggataaaattttgat----tctttccttttg---tc-----------agataatgatttagttttctgccacctccaaagaggatcagttag---gt---------------------------------------- i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1198111 321 + 48283576 -GTGTCCA-TCCCTGGATACTTTAGTTTTGTTCACTT-AAAAAAAA-------TTGATAGGTTTTTAAAGTCTGTGAAACTA----CTAAAAGAAAGGGATGGAAACCTT-------------CTA------Gtctgttgaaaaaacagact--gataacctgtggagattctcctagtctgaaatttggtgattccttatgctt-atttacttgttggaatactttatagaggaa------ctttcatct---atttggttatccggtaatatagtat---------------------------------atctagggaatgcaggataaattcttggt----tctttgtgtttggcttt-----------acataatgaattagttctctatcacctccaatgataagggg------------------------------------------------- i otoGar3.GL873522 C 0 C 0 s canFam3.chr4 37135610 333 + 88276631 agtatgca-tttctagatactctggtttcgtctgttt-AAAAAAAA-------TTAGt--gtcttttaagtttgttaaacta----c-caag---------ttgctcttcatccttcttttgtttataatatagctgttggaaaactaggct--gttaacctgcagagattctcctagtttcgattttactaattttgtatgc-taatttatttgttggaatat--------aagatacttcttcttatcaactatttgtttacttaagaatatagttt---------------------------------acttagaaaaggcaggataaatgcttctt----tcc----ctttgtcatc-----------agataatgaattagttctctattgcctccaaaaatgatgagctag---gtt--------------------------------------- i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 217044 424 - 960158 gttgtgaa-tccctagatactctagtcttgcccattt-tAAAGAAT-------Atgatacttcttttgagtctgttaaattaaatcctcctt---------attcctttc-------ttttccttataactcctctgttgaaaaactagacttaaccaatctataaagatttgcctagtctggattttgcttattccatATGttt-acttatttgttgaaatacta-ataaagaaatacttcctcttatc-actatttggttaaccaggaatattatcccataataaaataaatattattttctaatatataacataggaaaggcaggataaaagcttgat----tctttccctttg---tcatctcttttcaagat----attgtgttccttctcatctgtgaagatgaccaattagtatgtttttttTTGGTGCTCAACCACTGAGCTATACCTGGTCGTG i dasNov3.JH562710 C 0 C 0 e cebCap1.NW_016107999v1 25072 2080 - 709587 M e mm10.chr13 65956546 863 - 120421639 I e proCoq1.NW_012152163v1 699175 728 - 940639 I a score=59819.000000 s hg38.chr5_KI270795v1_alt 15249 22 + 131892 -------------ttttttttt--t---------taaagaatcatt s panTro5.chr5 5263721 21 - 181907262 -------------ttttttttt--t----------aaagaatcatt i panTro5.chr5 C 0 C 0 s panPan2.chr5 5526111 20 - 183735486 -------------ttttttttt-------------aaagaatcatt i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1623899 27 + 3967317 -------------ttttttttt--t----ttttttaaagaatcatt i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4475805 31 + 163208435 -------------ttttttgtt--ttttttttttttaagaatcatt i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5708661 25 - 180051392 -------------tgttttttg--t------tttttttaaatcatt i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5900455 25 - 181584905 -------------tgttttttg--t------tttttttaaatcatt i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 929526 25 - 16193990 -------------tgttttttg--t------tttttttaaatcatt i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1746522 25 - 21434487 -------------tgttttttg--t------ttttttttaatcatt i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4715414 27 - 82825804 -------------tgttttttgttt------ttttttttaatcatt i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 210666 25 + 2521317 -------------tgttttttg--t------ttttttttaatcatt i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1701863 24 - 2415367 -------------tttgtttt---t------tttttttaaatcatt i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142772533 22 - 204313951 ----------------ttttca--t------ttttaaagaatcatt i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2171100 22 + 10068113 ----------------ttttta--t------ttttaaagaatcatt i saiBol1.JH378186 C 0 I 300 s cebCap1.NW_016107999v1 27153 22 - 709587 ----------------ttttta--t------ttttaaagaatcatt i cebCap1.NW_016107999v1 M 2080 C 0 s aotNan1.NW_018501968v1 1107973 22 - 2246441 ----------------ttttta--t------ttttaaagaatcatt i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1198432 16 + 48283576 ------------------------------ctttttaggggtcatt i otoGar3.GL873522 C 0 C 0 s canFam3.chr4 37135943 18 + 88276631 ----------------------------gtatttttaagactcata i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 217468 38 - 960158 TTTCCCCCCTCCCCAGTTTgtt--t------ttttaaagaattatt i dasNov3.JH562710 C 0 C 0 e mm10.chr13 65956546 863 - 120421639 I e proCoq1.NW_012152163v1 699175 728 - 940639 I a score=1541064.000000 s hg38.chr5_KI270795v1_alt 15271 128 + 131892 acgggctgatgtttttaaacatagttggtgtgtttccatctcttgtaattg------------------------------ttatgcct-gttgaagctcaaattatc-ccatctttggccaataagaacctcttca-agttggttcctgagacc-tttttt s panTro5.chr5 5263742 128 - 181907262 atgggctgatgtttttaaacatagttggtgtgtttccatctcttgtaattg------------------------------ttacgcct-gttgaagctcaaattatc-ccatctttggccaataagaacctcttca-agttggttcctgagacc-tttttt i panTro5.chr5 C 0 C 0 s panPan2.chr5 5526131 128 - 183735486 atgggctgatgtttttaaacatagttggtgtgtttccatctcttgtaattg------------------------------ttacgcct-gttgaagctcaaattatc-ccatctttggccaataagaacctcttca-agttggttcctgagacc-tttttt i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1623926 128 + 3967317 atgggctgatgtttttaaacatagttggtgtgtttccatctcttgtaattg------------------------------ttatgcct-gttgaagctcaaattatc-ccatctttggccaataagaacctcttca-agttggttcctgagacc-tttttt i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4475836 128 + 163208435 atgggctgatgtttttaaacatagttgatgtgtttccatctcttgtaattg------------------------------ttatgcct-gttgaagctcaaattatc-ccatctttggccaatgagaacctcttca-agttggttcctgagacc-tttttt i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5708686 128 - 180051392 atgggctcgtgtttttaaacatagttgatgtgtttccatgtcttgtaattg------------------------------ttacgcct-attgaagctcaaattatc-ccatctttggccaataaaaacgtcttca-agttggttcttaagccc-tttttt i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5900480 128 - 181584905 atgggctcgtgtttttaaacatagttgatgtgtttccatgtcttgtaattg------------------------------ttacgcct-attgaagctcaaattatc-ccatctttggccaataaaaacgtcttca-agttggttcttaagccc-tttttt i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 929551 128 - 16193990 atgggctcgtgtttttaaacatagttgatgtgtttccatctcttgtaattg------------------------------ttacacct-attgaagctcaaattatc-ccatctttggccaataaaaacgtcttca-agttggttcttaagccc-tttttt i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1746547 129 - 21434487 atgggctcgtgtttttaaacatagttgatgtgtttccatctcttgtaattg------------------------------ttacgcct-attgaagctcaaattatc-ccatctttggccaataaaaatgtcttca-agttggttcttaagcccttttttt i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4715441 127 - 82825804 atgggctcgtgtttttaaacatagttgatgtgtttccatctcttgtaattg------------------------------ttacgcct-attgaagct-aaattatc-ccatctttggccaataaaaatgtcttca-agttggttcttaagccc-tttttt i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 210691 127 + 2521317 atgggctcgtgtttttaaacatagttgatgtgtttccatctctt-taattg------------------------------ttacgcct-attgaagctcaaattatc-ccatctttggccaataaaaacgtcttca-agttggttcttaagccc-tttttt i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1701887 128 - 2415367 atgggctcatgtttttaaacatagttgatgtgtttccatctcttgtaattg------------------------------ttacacct-attgaaggtcaaattatg-ccatctttggccaataagaacgtcttca-agttggttcttgagccc-tttttt i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142772555 128 - 204313951 atgggctcatgtttttaaacacagttgatgtgtttccatctcttgtagtca------------------------------ttatgctt-attgaagctcaacttatc-ccatctttggccaataagaacctcttca-ggttggttcctgaaccc-tttttt i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2171422 128 + 10068113 atgggctcatgtttttaaacacagttgatgtgtttccatctcttgtaattg------------------------------ttatgctt-attgaagctcaaattatc-ccatctttggccaataagaatctcttca-ggttggttcctgaaccc-tttttt i saiBol1.JH378186 I 300 C 0 s cebCap1.NW_016107999v1 27175 128 - 709587 atgggctcatgtttttaaacacagttgatgtgtttccatctcttgtaatcg------------------------------ttatgctt-attgaagctcaaattatc-ccatctttggccaataggaacctcttca-ggttggttcctgaaccc-tttttt i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1107995 128 - 2246441 atgggctcatgtttttaaacacagttgatgtgtttccatctcttgtaatcg------------------------------ttatgctt-attgaagctcaaattatc-ccatctttggccaataagaacctcttca-ggttggttcctgaacgc-tttttt i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1198448 129 + 48283576 attgacccatgtatttaaacatagttgatgtgttccagtctattgtaattg------------------------------tcatgctt-attgaagcacagattaccattttttttggtcagtgagagcctcttca-cattgattcttgagccc-tttATT i otoGar3.GL873522 C 0 I 912 s canFam3.chr4 37135961 126 + 88276631 ---aactcatgtattgaagcatggtagatgtatttcaatctgttggagtaa------------------------------ttatccttaatagaaactcaaattatc-ccatctttagctaatgggagcctcttca-ggttgattcctgagtca-tttttt i canFam3.chr4 C 0 I 5 s dasNov3.JH562710 217506 141 - 960158 gggaactcatgtatttaaacacagttgtaatgtttcaccctattgtaattgttatccattgtattcagtcatttgtaattattatcctt-cttgaagcttaaa-tatc-ctatctttggcc----------tcttcacagttaattc-------c-tttttt i dasNov3.JH562710 C 0 C 0 e mm10.chr13 65956546 863 - 120421639 I e proCoq1.NW_012152163v1 699175 728 - 940639 I a score=1230022.000000 s hg38.chr5_KI270795v1_alt 15399 112 + 131892 gacataatccca-tcgtcttctgtttttttgctctctggtttgataagatgttccaagttcatcttgtgca--------------tttcttgccccagacctttaatcagaacattctccaagaagc s panTro5.chr5 5263870 110 - 181907262 gacataatccca-tcgtcttctgtttttttgctctctggtttgataagatg--ccaagttcatcttgtgca--------------tttcttgccccagacctttaatcagaaaattctccaagaagc i panTro5.chr5 C 0 C 0 s panPan2.chr5 5526259 112 - 183735486 gacataatccca-tcgtcttctgtttttttgctctctggtttgataagatgttccaggttcatcttgtgca--------------tttctagacccagacctttaatcagaaaattctccaagaagc i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1624054 112 + 3967317 gacataatccca-tcgtcttctgtttttttgctctctggtttgataagatgttccaagttcatcttgtgca--------------tttcttgccccagacctttaatcagaacattctccaagaagc i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4475964 112 + 163208435 gacataatccca-tcgtcttctgtttttttgctctctggtttgataagatgttccaagttcatcttgtgca--------------tttcttgccccagacctttaatcagaaaattctccaagaagc i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5708814 111 - 180051392 gacataatcccagtcgtcttctg-ttttttgctctctggtttgataagatgtttcaagttcatcttgtaca---------------atcttgccccagacctttaatcagaaaattctccaagaagc i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5900608 111 - 181584905 gacataatcccagtcgtcttctg-ttttttgctctctggtttgataagatgtttcaagttcatcttgtaca---------------atcttgccccagacctttaatcagaaaattctccaagaagc i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 929679 111 - 16193990 gacataatcccagtcgtcttctg-ttttttgctctctggtttgataagatgtttcaagttcatcttgtaca---------------atcttgccccagacctttaatcagaaaattctccaagaagc i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1746676 111 - 21434487 gacataatcccagtcgtcttctg-ttttttgctctctggtttgataagatgtttcaagttcatcttgtaca---------------atcttgccccagacctttaatcagaaaattctccaagaagc i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4715568 111 - 82825804 gacataatcccagtcgtcttctg-ttttttgctctctggtttgataagatgttccaagttcatcttgtaca---------------atcttgccccagacctttaatcagaaaattctccaagaagc i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 210818 111 + 2521317 gacataatcccagtcgtcttctg-ttttttgctctctggtttgataagatgtttcaagttcatcttgtaca---------------atcttgccccagacctttaatcagaaaattctccaagaagc i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1702015 111 - 2415367 gacataatcccagtggtcttctg-ttttttgctctctcgtttgataagatgctccaagttcatcttgtacg---------------atcttgccccagacctttaatcagaaaattctctaagaagc i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142772683 126 - 204313951 gatataatcccagtagtcttctg-tttcttgctctctggtttgataagatgttccaagttcatcttgtccattttttgccttatgtttcttgcctcagacctttaatcagaaaattctctaagaagc i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2171550 126 + 10068113 gatataatcccagtagtcttctg-tttcttgctctctggtttaataagatgttccaagttcatcttgtacattttttgccttacgtttcttgcctcagacctttaatcagaaaattgtctaagaagc i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 27303 126 - 709587 gatataatcccagtagtcttctg-tttcttgctctctagtttgataagatgttccaagttcatcttgtacattatttgccttacatttcttgcctccgacctttaatcagaaaattctctaagaagc i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1108123 127 - 2246441 gatataatcccaatagtcttctgttttcttgctctctggtttgataagatgttccaagttcatcttgtacatttttcgccttacatttcttgcctcagacctttaatcagaaaattctctaagaagc i aotNan1.NW_018501968v1 C 0 C 0 s canFam3.chr4 37136092 111 + 88276631 tacataatcctagtagtcttcag-gttgttgctctctggtctgacaggata-tctgagttcatcttgtatg--------------ttttctgcctcagacctttaatcagaaattcctctaagaatc i canFam3.chr4 I 5 I 234 s dasNov3.JH562710 217647 108 - 960158 ggcataatcttagtagttttctt-tttcttggtttct----tgacaggctgttccagattgatcttgtaca--------------tcttctgtcccagacctttaatgagaaaattttctaagaatc i dasNov3.JH562710 C 0 C 0 e mm10.chr13 65956546 863 - 120421639 I e otoGar3.GL873522 1198577 912 + 48283576 I e proCoq1.NW_012152163v1 699175 728 - 940639 I a score=406441.000000 s hg38.chr5_KI270795v1_alt 15511 50 + 131892 cttaa---------------------cattctggctgggtgcggtggctcacgcctgtaatcccagcactt s panTro5.chr5 5263980 50 - 181907262 cttaa---------------------cattctggctgggtgcggtggctcacgcctgtaatcccagccctt i panTro5.chr5 C 0 C 0 s panPan2.chr5 5526371 50 - 183735486 cttaa---------------------cattctggctgggtgcggtgactcacacctgtaatcccagcactt i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1624166 50 + 3967317 cttaa---------------------cattctggctgggtgcggtggctcacgcctgtaatcccagcactt i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4476076 50 + 163208435 cttaa---------------------cattctggctgggtgcggtggctctcgcctgtaatcccagcactt i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5708925 50 - 180051392 cttaa---------------------cattctggctgggtgtcgtggctcacacctgtaatcccagcactt i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5900719 50 - 181584905 cttaa---------------------cattctggctgggtgtcgtggctcacacctgtaatcccagcactt i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 929790 50 - 16193990 cttaa---------------------cattctggctgggtgtcgtggctcacacctgtaatcccagcactt i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1746787 71 - 21434487 cttggagaattctccaagaagccacccaccctggctgggtgtcatggctcacacctgtaatcccagcactt i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4715679 50 - 82825804 cttaa---------------------cattctggctgggtgtggtggctcacacctgtaatcccagcactt i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 210929 71 + 2521317 cttggAGAATTCTCCAAGAAGCCACCCACCCTggctgggtgtcgtggctcacacctgtaatcccagcactt i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1702126 49 - 2415367 c-taa---------------------cattctggctgggtgtggtggctcacacctgtaatcccagaactt i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142772809 49 - 204313951 ctta----------------------cattctggctgggtgcagtggctcatgcctgtaatcccagcactt i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2171676 43 + 10068113 ctta----------------------cattctggctgggtgcaatggctcatgcctctaatccca------ i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 27429 49 - 709587 ctta----------------------tattctggctgtgtgtaatggctcatgcctgtaatcccagcactt i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1108250 49 - 2246441 ctta----------------------cattctggctgggtgcaatgggtcatgcctgtaatcccagcactt i aotNan1.NW_018501968v1 C 0 C 0 s dasNov3.JH562710 217755 36 - 960158 --------------------cctgttttcttttactgggaa---------------gtaatactggagctt i dasNov3.JH562710 C 0 I 47 e mm10.chr13 65956546 863 - 120421639 I e otoGar3.GL873522 1198577 912 + 48283576 I e canFam3.chr4 37136203 234 + 88276631 I e proCoq1.NW_012152163v1 699175 728 - 940639 I a score=1821317.000000 s hg38.chr5_KI270795v1_alt 15561 180 + 131892 tggcactttgggaggccgaggcgagtggatcacttgagacctggcaatcatagagaaaccctgtctctactcaaaatacaaaaattatctgggcgtggtgacgcacgtgtatattcccagctgcttggcagactgaggcaggagaatcgcttgaacccgggaggcggaggttgtagtaag s panTro5.chr5 5264030 180 - 181907262 tggcactttgggaggccgaggcgagtggatcacttgagacctggcaatcatagagaaaccccgtctctactcaaaatacaaaaattagctgggcgtggtgacgcaggtgtatattcccagctgcttgggagactgaggcaggagaatcgcttgaacccgggaggcggaggttgtagtaag i panTro5.chr5 C 0 C 0 s panPan2.chr5 5526421 180 - 183735486 tggcactttgggaggccgaggcgagtggatcacttgagacctggcaatcatagagaaaccccgtctctactcaaaatacaaaaattagctgggcgtggtgacgcaggtgtatattcccagctgcttgggagactgaggcaggagaatcgcttgaacccgggaggcggaggttgtagtaag i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1624216 180 + 3967317 tggcactttgggaggccgaggcaagtggatcacttgagacctggcaatcatagagaaaccccgtctctactcaaaatacaaaaattagctgggcgtggtgacgcaggtgtatattcccagctgcttgggagactgaggcaggagaatcacttgaacccgggaggcggaggttgtagtaag i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4476126 180 + 163208435 tggcagtttgggaggccgaggcgagtggatcacttgaggcctggcaatcatagagaaaccccgtctctactcaaaatacaaaaattagctgggcatggtgatgcaggtgcgtattcccagctgcttgggagactgatgcaggagaattgcttgaacccgggaggtggaggttgtagtaag i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5708975 180 - 180051392 tggcactttgggaggccgaggtgagtggatcacttgaggcctggcaatcatggagaaaccccgtctctactcaaaatacaaaaattagctgggcgtggtgatgcaggtctgtaatcccagctacttggaaggctgaggcaggagaatcgcttgaacccgggaggtggaggttgtagtaag i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5900769 180 - 181584905 tggcactttgggaggccgaggtgagtggatcacttgaggcctggcaatcatggagaaaccccgtctctactcaaaatacaaaaattagctgggcgtggtgatgcaggtctgtaatcccagctacttggaaggctgaggcaggagaatcgcttgaacctgggaggtggaggttgtagtaag i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 929840 180 - 16193990 tggcactttgggaggccgaggtgagtggatcacttgaggcctggcaatcatggagaaaccccgtctctactcaaaatacaaaaattagctgggcgtggtgatgcaggtctgtaatcccagctacttggaaggctgaggcaggagaatcgcttgaacccgggaggtggaggttgtagtaag i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1746858 180 - 21434487 tggcactttgggaggccgaggtgagtggatcacttgaggcctggcaatcatggagaaaccccgtctctactcaaaatacaaaaattagctgggtgtggtgatgcaggtctgtaatcccagctacttggaaggctgaggcaggagaatcgcttgaacccgggaggtggaggttgtagtaag i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4715729 180 - 82825804 tggcactttgggaggccgaggtgagtggatcacttgaggcctggcaatcatggagaaaccccgtctctactcaaaatacaaaaattagctgggcgtggtgatgcaggtctgtaatcccagctacttggaaggctgaggcaggagagtcgcttgaacccgggaggtggaggttgtagtaag i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 211000 180 + 2521317 tggcactttgggtggccgaggtgagtggatcacttgaggcctggcaatcatggagaaaccccgtctctactcaaaatacaaaaattagctgggtgtggtgatgcaggtctgtaatcccagctacttggaaggctgaggcaggagaatcgcttgaacccgggaggtggaggttgtagtaag i manLeu1.NW_012103943v1 C 0 M 285 s colAng1.NW_012115755v1 1702175 180 - 2415367 tggcactttgggaggccgaggtgagtggatcacttgaggcctggcaatcatggagaaaccctgtctctactcaaaatacaaaaattagctgggcatggtgacgcaggtctgtaatcccagctgcttggaaggctgaggcaggagaattgcttgaacctgggaggtggaggttgtagtaag i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142772858 180 - 204313951 tggcacttttggaggctgaggtaagtggatcacttgagtcctggcaaacatggagaaaccccgtctctactaaaaatacaaaaattagctgggcagggtggtacaagcctgtaatcccagcaactcaggaggctgaggcaggagagtcacttgaacctgggaggcggaggttgtagtaag i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2171719 178 + 10068113 --gcacttttggaggccgaggtaagtggatcacttgaggcctggcaaacatggagaaaccccatctctactaaaaatacaaaaattagctgggcagggtggcacaagcctgtaatcccagctactcaggaggctgaggcaggagaatcgcttgaacctgggaggtggaggttgtagtaag i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 27478 180 - 709587 tggcacttttggaggccgaggtaagtggatcacttgaggcctggcaaacatggagaaaccccgtctctactaaaaatagaaaaattagctgggcagggtggcacaagcctgtaatcccagctactcaggaggctgaggcagaagaatcgcttgaacctgggaggcggaggttgtagtaag i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1108299 180 - 2246441 tggcacttttggaggctgaggtaagtggatcacttgaggcctggcaaacatggagaaaccccgtctctactaaaaatacaaaaattagctgggcagggtggcacaagcctgtaatcccagctactcaggaggctgaggcaggagaatcgcttgaacctgggaggcggaggttgtagtaag i aotNan1.NW_018501968v1 C 0 C 0 e mm10.chr13 65956546 863 - 120421639 I e otoGar3.GL873522 1198577 912 + 48283576 I e canFam3.chr4 37136203 234 + 88276631 I e proCoq1.NW_012152163v1 699175 728 - 940639 I e dasNov3.JH562710 217791 47 - 960158 I a score=602403.000000 s hg38.chr5_KI270795v1_alt 15741 97 + 131892 tttagattgcaccactgcactccagcattctgggcgac----tgagtgagattccacct-c--aaaaaaaa--aa----------------aaaaaaaaaaaaggagcc-----ttacattctttta s panTro5.chr5 5264210 85 - 181907262 tttagattgcaccactgcactccagcatcctgggtgac----tgagtgagattccacct-c--aaaaaaaa--aa----------------------------ggagcc-----ttacattctttta i panTro5.chr5 C 0 C 0 s panPan2.chr5 5526601 84 - 183735486 tttagattgcaccactgcactccagcatcccgggcgac----tgagtgagattccacct-c--aaaaaaaa--a-----------------------------ggagcc-----ttacattctttta i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1624396 97 + 3967317 tttatattgcaccactgcactccagcatcctgggcgac----tgagtgagattccacct-c--aaaaaaaa--aa----------------aaaaaaaaaaaaggagcc-----ttacattctttca i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4476306 95 + 163208435 tttagattgcaccactgcgctccagcatcctgggcgac----tgagtgagattccacct-c--aaaaaaaa--aa----------------aaaaaaaaaa--ggagcc-----ttacattctttta i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5709155 91 - 180051392 cttagattgtgccactgcactccagcatcctgggcgac----tgagtgagattccacct-c--aaaaaaaa--aa----------------aaaaag------gaggcc-----ttacattctttca i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5900949 91 - 181584905 cttagattgtgccactgcactccagcatcctgggcgac----tgagtgagattccacct-c--aaaaaaaa--aa----------------aaaaag------gaggcc-----ttacattctttca i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 930020 91 - 16193990 cttagattgtgccactgcactccagcatcctgggcgac----tgagtgagattccacct-c--aaaaaaaa--aa----------------aaaaag------gaggcc-----ttacattctttca i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1747038 92 - 21434487 cttagattgtgccactgcactccagcatcctgggcgac----tgagtgagattccacctcc--aaaaaaaa--aa----------------aaaaag------gaggcc-----ttacattctttca i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4715909 93 - 82825804 cttagattgtgccactgcactccagcatcctgggcgac----tgagtgagattccacct-caaaaaaaaaa--aa----------------aaaaag------gaggcc-----ttacattctttca i chlSab2.chr23 C 0 C 0 s colAng1.NW_012115755v1 1702355 97 - 2415367 cttagattgtgccactgcactccagcgtcctgggcgac----tgagtgagattccacct-c-aaaaaaaaa--aa----------------aaaaaa------gaggccttacattacattctttca i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142773038 85 - 204313951 ctgagattgtg--------ctccagcagcctgggcgactgagtgagtgagactccactt-c--aaaaaaaa--aa----------------aaaa--------gaagcc-----ttatattctttta i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2171897 87 + 10068113 ctgagattgtg--------ctccagcagcctgggcgactgagtgagtgagactccacct-c--aaaaaaaagtaa----------------aaaa--------gaagcc-----ttacattctttta i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 27658 101 - 709587 ctgaggttgtg--------ctccagcagcctgggcgactaagtgagtgagactccactt-a--aaaaaaaa--aaaacacaaaaaaaaacgaaaa--------gaaacc-----ttacattctttta i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1108479 84 - 2246441 ctgagattgtg--------ctccagtagcctgggcaactgagtgagtgagactccacct-c--aaaaaaa---aa----------------aaaa--------gaagcc-----ttacattctttta i aotNan1.NW_018501968v1 C 0 C 0 e mm10.chr13 65956546 863 - 120421639 I e otoGar3.GL873522 1198577 912 + 48283576 I e canFam3.chr4 37136203 234 + 88276631 I e proCoq1.NW_012152163v1 699175 728 - 940639 I e dasNov3.JH562710 217791 47 - 960158 I e manLeu1.NW_012103943v1 211180 285 + 2521317 M a score=32955.000000 s hg38.chr5_KI270795v1_alt 15838 3 + 131892 ctg s panTro5.chr5 5264295 3 - 181907262 ctg i panTro5.chr5 C 0 C 0 s panPan2.chr5 5526685 3 - 183735486 ctg i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1624493 3 + 3967317 ctg i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4476401 3 + 163208435 ctg i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5709246 3 - 180051392 ctg i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5901040 3 - 181584905 ctg i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 930111 3 - 16193990 ctg i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1747130 3 - 21434487 ctg i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4716002 3 - 82825804 ctg i chlSab2.chr23 C 0 C 0 s colAng1.NW_012115755v1 1702452 3 - 2415367 ctg i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142773123 3 - 204313951 ctg i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2171984 3 + 10068113 ctg i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 27759 3 - 709587 ctg i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1108563 3 - 2246441 ctg i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1199489 3 + 48283576 cta i otoGar3.GL873522 I 912 C 0 e mm10.chr13 65956546 863 - 120421639 I e canFam3.chr4 37136203 234 + 88276631 I e proCoq1.NW_012152163v1 699175 728 - 940639 I e dasNov3.JH562710 217791 47 - 960158 I e manLeu1.NW_012103943v1 211180 285 + 2521317 M a score=340262.000000 s hg38.chr5_KI270795v1_alt 15841 36 + 131892 agaaatgatactgaagt--taggaatgttcattactgc s panTro5.chr5 5264298 36 - 181907262 agaaatgatactgaagt--taggaatgttcattaccgc i panTro5.chr5 C 0 C 0 s panPan2.chr5 5526688 36 - 183735486 agaaatgatactgaagt--taggaatgttcattaccgc i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1624496 36 + 3967317 agaaatgatactgaagt--taggaatgttcattaccgc i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4476404 36 + 163208435 agaaatgatactgaagt--taggaatgttcattaccgc i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5709249 36 - 180051392 agaaatcatactgaagt--taggaatgttcattaccgt i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5901043 36 - 181584905 agaaatcatactgaagt--taggaatgttcattaccgt i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 930114 36 - 16193990 agaaatcatactgaagt--taggaatgttcattaccgt i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1747133 36 - 21434487 agaaatgatactgaagt--taggaatgttcattaccgt i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4716005 36 - 82825804 agaaatgacgctgaagt--taggaatgttcattaccgt i chlSab2.chr23 C 0 C 0 s colAng1.NW_012115755v1 1702455 36 - 2415367 agaaatgatactgaagt--taggaatgttcattatcat i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142773126 36 - 204313951 agaaaggacactgaagt--tagaaatgttcattactgc i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2171987 36 + 10068113 agaaatgacactgaagt--tagaaatgttcattactgc i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 27762 36 - 709587 agaaatgacactgaagt--tagaaatgttcattactga i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1108566 36 - 2246441 agaaatgacactgaagt--tagaaatgttcattactgc i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1199492 36 + 48283576 ggaaatgatattgatac--taggaatgtccattgctgc i otoGar3.GL873522 C 0 C 0 s canFam3.chr4 37136437 32 + 88276631 agtagtgatcccggggtcctgggattg------agtcc i canFam3.chr4 I 234 C 0 e mm10.chr13 65956546 863 - 120421639 I e proCoq1.NW_012152163v1 699175 728 - 940639 I e dasNov3.JH562710 217791 47 - 960158 I e manLeu1.NW_012103943v1 211180 285 + 2521317 M a score=231888.000000 s hg38.chr5_KI270795v1_alt 15877 47 + 131892 tgggttg--------gcct------aggaattac------g----------tgtg---tgtgtgtgtgtgtgtgt----------------------------------------------------------------------------gtgtg s panTro5.chr5 5264334 42 - 181907262 tgggttg--------gcct------aggaattac------a----------tgtg---tgtgtgtgtatatatat--------------------------------------------------------------------------------- i panTro5.chr5 C 0 C 0 s panPan2.chr5 5526724 123 - 183735486 tgggttg--------gctt------aggaattac------a----------tgtg---tgtgtgtgtgtatatatatatatgtatgtgtatatatatatatgtatgtgtatatatatatatatatatgtatgtgtatatatatatatgtatgtgta i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1624532 46 + 3967317 tgggttg--------gcct------aggaattac------a----------tgtg---tgtg-gtgtgtgtgtgt----------------------------------------------------------------------------gtgta i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4476440 42 + 163208435 tgggttg--------gcct------aggaattac------g----------tgtg---tgtgtgtatatatatat--------------------------------------------------------------------------------- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5709285 42 - 180051392 tgggttg--------gcct------aggaattac------g----------tgtg---tgtgtgtgtgtatgtat--------------------------------------------------------------------------------- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5901079 42 - 181584905 tgggttg--------gcct------aggaattac------g----------tgtg---tgtgtgtgtgtatgtat--------------------------------------------------------------------------------- i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 930150 48 - 16193990 tgggttg--------gcct------aggaattacgtgtgtg----------tgtg---tgtgtgtgtgtatgtat--------------------------------------------------------------------------------- i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1747169 48 - 21434487 tgggttg--------gcct------aggaattacgtgtgtg----------tgtg---tgtgtgtgtgtatatat--------------------------------------------------------------------------------- i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4716041 42 - 82825804 tgggttg--------gcct------aggaattac------g----------tgtg---tgtgtgtgtgtgtgtat--------------------------------------------------------------------------------- i chlSab2.chr23 C 0 C 0 s colAng1.NW_012115755v1 1702491 42 - 2415367 tgggttg--------gcct------gggaattac------g----------tgta---tgtgtgtgtgtatatat--------------------------------------------------------------------------------- i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142773162 40 - 204313951 tgggttg--------GCCT------AGGAATTAC------A----------TG-----TGTGTGTATATATATAT--------------------------------------------------------------------------------- i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2172023 38 + 10068113 tgggttg--------gcct------aggaattac------a-----------------tatgtgtatatatatat--------------------------------------------------------------------------------- i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 27798 38 - 709587 tgggttg--------gcct------aggaattac------a-----------------cgtgtgtagatatatat--------------------------------------------------------------------------------- i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1108602 38 - 2246441 tgggttg--------gcct------aggaattac------a-----------------tgtgtgtatatatatat--------------------------------------------------------------------------------- i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1199528 53 + 48283576 tgggttgttcattgtttct------aggtatttc------c----------agtagacagctaggaaatatctgt--------------------------------------------------------------------------------- i otoGar3.GL873522 C 0 I 1 s canFam3.chr4 37136469 58 + 88276631 tgggtca--------ggctccctgcagggattct------gcttctccctctgcc---tgtgtctctgcctctct--------------------------------------------------------------------------------- i canFam3.chr4 C 0 I 3 s dasNov3.JH562710 217838 25 - 960158 tggacag--------agct------aggaaatat------a----------tgta----------------------------------------------------------------------------------------------------- i dasNov3.JH562710 I 47 C 0 e mm10.chr13 65956546 863 - 120421639 I e proCoq1.NW_012152163v1 699175 728 - 940639 I e manLeu1.NW_012103943v1 211180 285 + 2521317 M a score=538026.000000 s hg38.chr5_KI270795v1_alt 15924 58 + 131892 tatatat-------------t--taaagataaaata--------ccttatgaattcacattgataacttgcaatcaaaatt s panTro5.chr5 5264376 57 - 181907262 -atatat-------------t--taaagataaaata--------ccttatgaattcacattgataacttgcaatcaaaatt i panTro5.chr5 C 0 C 0 s panPan2.chr5 5526847 71 - 183735486 tatatatatatatatatatat--taaagataaaata--------ccttatgaattcacattgataacttgcaatcaaaatt i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1624578 66 + 3967317 tatatatatatatat-----t--taaagataaaata--------ccttatgaattcacattgataacttgcagtcaaaatt i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4476482 55 + 163208435 ---atat-------------t--taaaggtaaaata--------ccttatgaattcacatggataacttccaatcaaaatt i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5709327 51 - 180051392 --------------------a--taaagataaaata--------ccttgtgaactcacattgataacttccaattaaaatt i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5901121 51 - 181584905 --------------------a--taaagataaaata--------ccttgtgaactcacattgataacttccaattaaaatt i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 930198 51 - 16193990 --------------------a--taaagataaaata--------ccttgtgaactcacattgataacttccaattaaaatt i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1747217 51 - 21434487 --------------------a--aaaagataaaata--------ccttgtgaattcacattgataacttccaattaaaatt i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4716083 51 - 82825804 --------------------a--taaagataaaata--------ccttgtgaattcacattgataacttccaattaaaatt i chlSab2.chr23 C 0 C 0 s colAng1.NW_012115755v1 1702533 53 - 2415367 --------------------atttgaagataaaata--------ccttgtgaattcacattgataacttccaattaaaatt i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142773202 50 - 204313951 --------------------T--TAAAGATAAAATA--------CCGTG-GAATTCATATTGATGACTTCCAATTAAAATT i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2172061 51 + 10068113 --------------------t--taaagataaaata--------tcttacaaattcatattgataacttccaattaaaatt i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 27836 51 - 709587 --------------------t--taaagataaaata--------tcttataaattcatattgataacttccagttaaaatt i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1108640 51 - 2246441 --------------------t--taaagataaaata--------tcttgtaaattcatattgataacttccaattaaaatt i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 699903 58 - 940639 tatattt-------------t--taaagataaagca--------ccttgtgaattcatactgataacttccagttaaagtt i proCoq1.NW_012152163v1 I 728 C 0 s otoGar3.GL873522 1199582 58 + 48283576 tatattt-------------t--taaaggtaaaata--------ccttgaaaatgcatactgataacttcctgttaaaatt i otoGar3.GL873522 I 1 C 0 s canFam3.chr4 37136530 57 + 88276631 tgtgtct-------------c--tgatgaataaataaatgaaatctttagaaaaaaGAAAAGAAAA---------Aaaatt i canFam3.chr4 I 3 C 0 s dasNov3.JH562710 217863 58 - 960158 tatattt-------------t--taaagataaagta--------ccttatgaattcatattgatgatttccagttaaaatt i dasNov3.JH562710 C 0 C 0 e mm10.chr13 65956546 863 - 120421639 I e manLeu1.NW_012103943v1 211180 285 + 2521317 M a score=3596631.000000 s hg38.chr5_KI270795v1_alt 15982 273 + 131892 gaggactccagggattttactaaacctcttctatattacaaatatatttctttcctcccaaa--------ttgagtattctggttctcaagggcacagggga-tcatagaattagaatatccgatggttacttattacctatctcccatggtaaacatatagatgtctcagaacaacaatattactgctgctaccaccaatgtgatgacttgaaaca---aaaaatgtttttggtttttgcatatgctctttccattcttcccccatt----a-----------------aaaaaa-----ta----gtactata s panTro5.chr5 5264433 272 - 181907262 gaggactccagggattttactaaacctcttctatattacaaatatatttctttcctcccaaa--------ttgagtattctggttctcaagggcacagggga-tcatagaattagaatatccgatggttacttattacctgtctcccatggtaaacatatagatgtctcagaacaacaatattactgccgctaccaccaatgtgatgacttgaaaca---aaaaatgtttttggtttttgcatatgctctttccgttcttcccc-att----a-----------------aaaaaa-----ta----gtactgta i panTro5.chr5 C 0 C 0 s panPan2.chr5 5526918 273 - 183735486 gaggactccagggattttactaaacctcttctatattacaaatatatttctttcctcccaaa--------ttgagtattctggttctcaagggcacagggga-tcatagaattagaatatccaatggttacttattacctgtctcccatggtaaacatatagatgtctcagaacaacaatattactgccgctaccaccaatgtgatgacttgaaaca---aaaaatgtttttggtttttgcatatgctctttccattcttcccccatt----a-----------------aaaaaa-----ta----gtactgta i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1624644 272 + 3967317 gaggactccagggattttactaaacctcttctatattaaaaatatatttctttcctcccaaa--------ttgagtattctggttctcaagggcacagggga-tcatagaattagaatatctgatggttacttattacctatctcccatggtaaacatatagatgtctcagaacaacaatattactgc-gctaccaccaatgtgatgacttgaaaca---aaaaatgtttttggtttttgcatatgctctttccattcttcccccatt----a-----------------aaaaaa-----ta----gtactata i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4476537 272 + 163208435 gaggactccagggattttactaaacctcttctatattacaaatatatttatttccttccaaa--------ttgagtattctggttctcaagggcacagggga-tcatagaattagaatatctgatggttacttattacctatatcccatggtaaacatatcgatgtctcagaataacagtattactgccgctaccaccagtgtgatgacttgaaaca---aaaaatgtttttgctttttgcatatgctctttccattcttcccc-att----a-----------------aaaaaa-----ta----gtactata i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5709378 274 - 180051392 gaggactccggggattttattaaacctcatctatattacaaatatatttcttcccttccaaa--------ttgagtattctggttctcaagggcacaaggga-tcatagaattagaatatccgatggttacttattacctgtatcccgtggtaaacatacagatgtctctgaataacaatattactgccactaccaccaatgtgatgacttgaaaca---aaaaatgtttttgctttttgcatacactctttgcattcttcccccatt---aa-----------------aaaaaa-----ta----gtactata i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5901172 274 - 181584905 gaggactccggggattttattaaacctcatctatattacaaatatatttcttcccttccaaa--------ttgagtattctggttctcaagggcacaaggga-tcatagaattagaatatccgatggttacttattacctgtatcccgtggtaaacatacagatgtctctgaataacaatattactgccactaccaccaatgtgatgacttgaaaca---aaaaatgtttttgctttttgcatacactctttgcattcttcccccatt---aa-----------------aaaaaa-----ta----gtactata i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 930249 274 - 16193990 gaggactccggggattttattaaacctcatctatattacaaatgtatttcttcccttccaaa--------ttgagtattctggttctcaagggcacaaggga-tcatagaattagaatatccgatggttacttattacctgtatcccgtggtaaacatacagatgtctctgagtaacaatattactgccactaccaccaatgtgatgacttgaaaca---aaaaatgtttttgctttttgcatacactctttgcattcttcccccatt---aa-----------------aaaaaa-----ta----gtactata i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1747268 274 - 21434487 gaggactccggggattttattaaacctcatctatattacaaatacatttcttcccttccaaa--------ttgagtattctggttctcaagggcacaaggga-tcatagaattagaatatccgatggttacttattacctgtatcccatggtaaacatatagatgtctctgaataacaatattactgccactaccaccaatgtgatgacttgaaaca---aaaaatgtttttgctttttgcatacactctttacattcttcccccatt---aa-----------------aaaaaa-----ta----gtactata i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4716134 274 - 82825804 gaggactccggggattttattaaacctcttctatattacaaatatatttcttcccttccaaa--------ttgagtattctggttctcaagggcacaaggga-tcatagaattagaatatccgatggttacttattacctgtatcccatggtaaacatatagacgtctctgaataacaatattactgccactaccactaatgtgatgacttgaaaca---aaaaatgtttttgctttttgcatacactctttacattcttcccccatt---aa-----------------aaaaaa-----ta----gtactata i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 211468 274 + 2521317 Gaggactccggggattttattaaacctcatctatattacaaatatatttcttcccttccaaa--------ttgagtattctggttctcaagggcacaaggga-tcatagaattagaatatccgatggttacttattacctgtgtcccatggtaaacatatagatgtctctgaataacaatattactgccactaccaccaatgtgatgacttgaaaca---aaaaatgtttttgctttttgcatacactctttacattcttcccccatt---aa-----------------aaaaaa-----ta----gtactata i manLeu1.NW_012103943v1 M 285 C 0 s colAng1.NW_012115755v1 1702586 273 - 2415367 gaggactccagggattttattaaacctcttctatattacaaatgtgtttcttcccttccaaa--------ttgagtattctggttctcaagggcacaaggga-tcatagaattagaatatctgatggttacttattacctgtatcccatggtaaacatacagatgtctcagaataacaatattactgccactaccaccaatgtgatgacttgaaaca---aaaaa-gtttttgctttttgcatacactctttacattcttcccccgtt---aa-----------------aaaaaa-----ta----gtactata i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142773252 275 - 204313951 GAGGCATCCAGGGATTTTACTAAACCTCTTCTATATTACAAATATATTTCTTTCCTTCCAAA--------TTGAGTATTCTGGTTCTCAAGGGCACAGGGGA-TCATAGAATTAGAATATCCGATGGTTACTTATTGTCTGTATCCCATGGTAAACATATGGATGTCTCCGAATTTCAGTATTACTGCCACTACCACCAGTGTGATGACTTGAAACA---GAAAATATTTTTGTTTTTTGCATGTGTTCTTTACATTCTTCCCCCATT--AAA-----------------AAAAAA-----TG----GTACTACA i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2172112 275 + 10068113 gaggactccagggattttactaaacctcttctatattacaaatatatttctttccttccaaa--------ttgagtattctggttctctagggcacagggga-ttgtagaattagaatatccaatggttacttattacctgtatcccatggtaaatatgtagatgtctcaaaatgtcaatattactgccactaccaccagtgtgatgacttgaaaca---aaaaatatttttgctttttgcatgtgctctttctattcttcccccatt--aaa-----------------aaaaaa-----tg----gtactaca i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 27887 277 - 709587 gaggactccagggattttactaaacctcttctatattacaaatatatttctttccttccaaa--------ttgagtattctggttctcaagggcacagggga-tcatagaattagaatatccgatggttacttattacctgtatctgttggtaaatatatagatatctcagaatttcagtattactgccactaccaccagtgtgatgacttgaaaca---aaaaatatttttgctttttacatgtgctctttccattcttcccccattaaaaa-----------------aaaaaa-----tg----gtactaaa i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1108691 275 - 2246441 gaggacaccagggattttactaaacctcttctatattacaaatatatttctttccttccaaa--------ttgaatattctggttctcaagggcacagggga-tcatagaattagaatatctgatggttacttattacctgtatcccacggtaaatatatagatgtctcagaatttcagtattactgccactaccaccagcgtgatgacttgaaaca---aaaaatatttttgctttttgcatgtgctctttccattcttcccccatt--aaa-----------------aaaaaa-----tg----gtactacg i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 699961 274 - 940639 caggactatagggattttgctaaacttcttctatattataaatatatctctttccctccaaa--------ctgagtattctagttctcaagggcacagggga-tctcagaattacaatatctcatggttacttattacctttatcccatgttaaacatacagatgttccagaataacaatactactgccactaccaccaatgtgattacttaagacag--aaaaaaatttttgctttttgcgtatgctttccccattctccccttatt----a-----------------aaaaaa-----ta----gtactgta i proCoq1.NW_012152163v1 C 0 C 0 s otoGar3.GL873522 1199640 288 + 48283576 caggactgtaggtattttactaaacctcttctatattacaaatatatctcttaccttacaag--------ctgagtattctagttctgaaggttagagggca-tcacagaattctaatatcccatggttacttactacctttatcccatcttaaacatgtaaatgttccagaatgacaatactgcttctgttaccatcaatgtg--tacttaagacag--aaaaaacattttgctttttgcatatgcttt-cccattcttcccccaat----aaatagtattatactatTAAAAAA-----TA----GTACTATA i otoGar3.GL873522 C 0 I 186 s canFam3.chr4 37136587 276 + 88276631 caagatgagtggaattttactaaacatcttctatattataaataa------ctccttccaaactgagtatttgagtattctggttctcagggacacaagggatttatagaaatagaatatcccacagtttcttattacatttatct-atgttatatgtagagatatctcagaataacattattaccactactgccaccagtgtgattacttaaaata---gtaaa---ttctgctttttgcat-tgctttcctcattcttctgt-att---aa-----------------aaaaaaatactta----atactata i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 217921 242 - 960158 ---cataacaggaattctacttaaccttttctatattataaata--------------------------tagagtattttggttcttaagaatgcagagga-ctgtgaaattggaatatgtcatcattacttattacctttatcctacattacacatataaataactcaggatg--aatactgct-ttaccaccaccagtgtgactactgaaaatagtaaaaaagaaaattgtttttt---------------atgctttccccatt---ta-----------------aaaaaa-----tagttggtacttta i dasNov3.JH562710 C 0 C 0 e mm10.chr13 65956546 863 - 120421639 I a score=1224457.000000 s hg38.chr5_KI270795v1_alt 16255 96 + 131892 tg-----------------------------------ttgtaagcatgtgcacatgttacatattataccctctctttaaaccatgtatagtttttgcaagaaactgtatattcagtgttcagcaccagtc s panTro5.chr5 5264705 96 - 181907262 tg-----------------------------------ttgtaagcatgtgcatatgttacatattataccctctctttaaaccgtgtatagtttttgcaagaaactgtatattcagtgttcagcaccagtc i panTro5.chr5 C 0 C 0 s panPan2.chr5 5527191 96 - 183735486 tg-----------------------------------ttgtaagcatgtgcagatgttacatattataccctctctttaaaccatgtatagtttttgcaagaaactgtatattcagtgttcagcaccagtc i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1624916 96 + 3967317 tg-----------------------------------ttgtaagcatgtgcagatgttacatattataccctctctttaaaccatgtatagtttttgcaagaaactgtatattcagtgttcagcaccagtc i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4476809 96 + 163208435 ta-----------------------------------ttataagcatgtgcagatgttacatattataccctctctttaaaccatgtatagtttttgcaagaaactgtatattcagtgttcagcaccaggc i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5709652 96 - 180051392 tg-----------------------------------ttgtaggagtgtgcagctgttacatattataccctccctttaaaccatgtatagtttttgcaagaaactctatattcagtgttcagcaccagtc i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5901446 96 - 181584905 tg-----------------------------------ttgtaggagtgtgcagctgttacatattataccctccctttaaaccatgtatagtttttgcaagaaactctatattcagtgttcagcaccagtc i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 930523 96 - 16193990 tg-----------------------------------ttgtaggagtgtgcagctgttacatattataccctccctttaaaccatgtatagtttttgcaagaaactctatattcagtgttcagcaccagtc i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1747542 96 - 21434487 tg-----------------------------------ttgtaggagtgtgcagctgttacatactataccttcccttcaaaccatgtatagtttttgcaagaaactgtatattcagtgttcagcaccagtc i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4716408 96 - 82825804 tg-----------------------------------ttgtaggagtgtgcagctgttacatattataccttccctttaaaccatgtatagtttttgcaagaaactgtatattcagtgttcagcaccagtc i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 211742 96 + 2521317 tg-----------------------------------ttgtaggagtgtgcagctgttacatactataccctccctttaaaccgtgtatagtttttgcaagaaactgtatattcagtgttcagccccagtc i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1702859 94 - 2415367 ta-----------------------------------ttgtaggagtgtgcagctgttacatattatactctccctttaaaccatgtatagtttttgcaagaaac--tatattcagtgttcagcaccagtc i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142773527 96 - 204313951 TA-----------------------------------TTGTAGGAGTGTACAGCTGTTACATATTATAACCTCCTTTAAAACCACATATAGTTTTTGCAAGAAACTatatattcagtgttcagcactagtg i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2172387 131 + 10068113 tattgtgggagtgtacagctgttacatactataaccgttgtaggagtgtacagctgttacatactatagcctccttttaaaccacatagagtttttgcaagaaactgtatattcagtgttcagcaccagtc i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 28164 96 - 709587 ta-----------------------------------ttgtaggagtgtacagctgttacatattataacctccttttaaaccacatatagtttttgcaagaaactgtatattcaatgttcagcactagtc i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1108966 96 - 2246441 ta-----------------------------------ttgtaggagtgtacagctgttacatattataacctccttttaaaccacatatagtttttgcaagaaactgtatattcagtgttcagcactagtc i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 700235 96 - 940639 ta-----------------------------------ttgtcagagtatatagatattacatactgttccctccctttaaaccatacatagtttctacgagaaactgtgtatttaatgtccatcaccagtc i proCoq1.NW_012152163v1 C 0 I 36 s otoGar3.GL873522 1200114 95 + 48283576 tg-----------------------------------ttgtcagagtgtgtagctatcaca-attagaccctccctttaaaccatacatagtttctacaagaaactgtatatttaatattcatcactacta i otoGar3.GL873522 I 186 I 6 s canFam3.chr4 37136863 93 + 88276631 ta-----------------------------------ttgtcagagtatagagctacagtatactatgcttttcattta---catatatagtttctacaagaggctgtatatgtaatactcatcaccagtc i canFam3.chr4 C 0 I 5 s dasNov3.JH562710 218163 88 - 960158 ta-----------------------------------ttgtaagagtatacagctatgaca---tgtatgttcccttttaaccatacgtaatttctacaagaaactata-atgc----tttaccaccagcc i dasNov3.JH562710 C 0 C 0 e mm10.chr13 65956546 863 - 120421639 I a score=382273.000000 s hg38.chr5_KI270795v1_alt 16351 38 + 131892 ------cttata-----agtctctagtcatttttttaattgaagctcat s panTro5.chr5 5264801 38 - 181907262 ------cttatg-----agtctctagtcatttttttaattgaagctcat i panTro5.chr5 C 0 C 0 s panPan2.chr5 5527287 38 - 183735486 ------cttata-----agtctctagtcatttttttaattaaagctcat i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1625012 37 + 3967317 ------cttata-----agtctctagtca-ttttttaattgaagctcat i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4476905 38 + 163208435 ------cttata-----agtctctagtctttttttttattgaagctcat i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5709748 38 - 180051392 ------cttata-----agtcttgagtcattttttttattgaagctcat i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5901542 38 - 181584905 ------cttata-----agtcttgagtcattttttttattgaagctcat i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 930619 38 - 16193990 ------cttata-----agtcttgagtcattttttttattgaagctcat i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1747638 38 - 21434487 ------cttata-----agtctctagtcattttttttattgaagctcat i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4716504 38 - 82825804 ------cttata-----agtctctagtcattttttttattgaagctcat i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 211838 38 + 2521317 ------cttata-----agtctctagtcattttttttattgaagctcat i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1702953 38 - 2415367 ------cttaca-----agtctctagtcatttttttaattgaagctcat i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142773623 43 - 204313951 ------cttatactcgtagtccctagtcatttttgttgttgaagctcat i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2172518 43 + 10068113 ------cttgtacttgtagtcgctagtcatttttgtcgttgaagctcat i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 28260 43 - 709587 ------cttatacttgtagtccctagtcttttttgttgttgaagctcat i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1109062 43 - 2246441 ------cttatacttgtagtcccttgtcagttttcttgttgaagctcat i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1200215 30 + 48283576 ------ctcata-----agt--ttagtcattttggttgccaga------ i otoGar3.GL873522 I 6 C 0 s canFam3.chr4 37136961 38 + 88276631 ------ctgata-----agtctctagtcattttgattgtcacagttcat i canFam3.chr4 I 5 C 0 s dasNov3.JH562710 218251 44 - 960158 tttctgttgatg-----attctccattcattttggttgtcaaagctcat i dasNov3.JH562710 C 0 C 0 e mm10.chr13 65956546 863 - 120421639 I e proCoq1.NW_012152163v1 700331 36 - 940639 I a score=911644.000000 s hg38.chr5_KI270795v1_alt 16389 65 + 131892 tctctagttaagattcctcgggaagcgttcatgggaacattattcctggagtt----ttt-attacaact s panTro5.chr5 5264839 65 - 181907262 tctctagttaagattcctcgggaagcgttcatgggaacattattcctggagtt----ttt-gttacaact i panTro5.chr5 C 0 C 0 s panPan2.chr5 5527325 65 - 183735486 tctttagttaagattcctcgggaagcgttcatgggaacattattcctggagtt----ttt-attacaact i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1625049 66 + 3967317 tctctagttaagattcctcgggaagcgttcatgggaacattattcctggagtt----tttaattacaact i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4476943 65 + 163208435 tctctagttaagattcctcgggaagtgttcatgggaacattattcctggagtt----ttt-attacaact i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5709786 65 - 180051392 tctctagttaagattcctcgggaagcgttcatgggaacattattcctggagtt----ttt-attacaact i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5901580 65 - 181584905 tctctagttaagattcctcgggaagcgttcatgggaacattattcctggagtt----ttt-ATTACAACT i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 930657 65 - 16193990 tctctagttaagattcctcgggaagcgttcatgggaacattattcctggagtt----ttt-attacaact i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1747676 65 - 21434487 tctctagttaagattcctcgggaagcgttcatgggaacattattcctggagtt----ttt-attacaact i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4716542 65 - 82825804 tctctagttaagattcctcaggaagcgttcatgggaacattattcttggagtt----ttt-ATTACAACT i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 211876 65 + 2521317 tctctagttaagattcctcgggaagcgttcatgggaacattattcctggagtt----ttt-attacaact i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1702991 65 - 2415367 tctctagttaagattcctcgggaagcgttcatgggaacattattcctggagtt----ttt-attacaact i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142773666 65 - 204313951 tctctagttaagattcctcgggaagtgtttatgtgaacgttattcctggagtt----ctt-atcataact i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2172561 65 + 10068113 tctgtagttaagattcctcgggaagtgttcatgggaacgttattcctggagtt----ctt-atcataact i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 28303 65 - 709587 tctgtagttaagattcttcaggaagtgttcatgtgaacgttattcctggagtt----ctt-atcataact i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1109105 65 - 2246441 tctgtagttaagattcctcgggaagtgttgatgtgaacgttactcctggagtt----ctt-accatgact i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 700367 65 - 940639 tctctagttaagattcctcaggaagagttcatgggagcattattcccagagtt----ctt-attatagct i proCoq1.NW_012152163v1 I 36 C 0 s otoGar3.GL873522 1200245 65 + 48283576 tctctggttaagattcctcaggaagagttcattagaatattattcccagagtt----ctt-attataact i otoGar3.GL873522 C 0 C 0 s canFam3.chr4 37136999 62 + 88276631 tcttt-----agattcctcaggaaaggttcatgg--acagtattccctgagttcatattt-actataact i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 218295 69 - 960158 ttcctgactaagattcctcaggaagggttcatggcaacaatgttccctaagtacctactt-attactacc i dasNov3.JH562710 C 0 C 0 e mm10.chr13 65956546 863 - 120421639 I a score=1637103.000000 s hg38.chr5_KI270795v1_alt 16454 130 + 131892 tatttacgtaattctaaaacttacagattttataaaacgttattg---tgcttattgtttgta-tcat-tatatttgaaattcagttttgctggatgtaaaaatccttggct--c--gttttctcgcttgtgtatcttt s panTro5.chr5 5264904 130 - 181907262 tatttacgtacttctaaaacttacagattttataaaacgttattg---tgcttattgtttgta-tcat-tatatttgaaattcagttttgctggatctaaaaatccttggct--c--attttctcgcttgtgtatcttt i panTro5.chr5 C 0 C 0 s panPan2.chr5 5527390 130 - 183735486 tatttacgtacttctaaaacttacagattttataaaacgttattg---tgcttattgtttgta-tcat-tatatttgaaattcagttttgctggatgtaaaaatccttggct--c--attttctcgcttgtgtatcttt i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1625115 130 + 3967317 tatttacgtacttctaaaacttacagattttataaaacgttattg---tgcttattgtttgta-tcat-tgtatttgaaattcagttttgctggatgtaaaaatccttggct--c--attttctcgcttgtgtatcttt i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4477008 130 + 163208435 tatttatgtacttataaaacttacagattttataaaacattattg---tacttattgtttgta-tcat-tatatttgaaattctgttttgctggatgtaaaaatccttgact--c--attttcttgcttgtgtatcttt i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5709851 130 - 180051392 tatttatgtacttataaagcttatagattttataaaacattattg---tgcttattgtttgta-tcgt-tatatttcaaattcagttttgctggatgtaaaaatccttgact--c--attttcttgcttgtgtatcttt i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5901645 130 - 181584905 TATTTATGTACTTATAAAGCTTATAGATTTTATAAAACATTATTG---TGCTTAttgtttgta-tcgt-tatatttcaaattcagttttgctggatgtaaaaatccttgact--c--attttcttgcttgtgtatcttt i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 930722 130 - 16193990 tatttatgtacttataaagcttatagattttataaaacattattg---tgcttattgtttgta-tcgt-tatatttcaaattcagttttgctggatgtaaaaatccttgact--c--attttcttgcttgtgtatcttt i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1747741 130 - 21434487 tatttatgtacttataaagcttatagattttataaaacattattg---tgcttattgtttgta-tcgt-tatatttcaaattcagttttgctggatgtaaaaatccttgact--c--attttcttgcttgtgtatcttt i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4716607 130 - 82825804 TATTTATGTATTTATAAAGCTTATAGATTTTATAAAACATTATTG---TGCTTAttgtttgta-tcgt-tatatttcaaattcagttttgctggatgtagaaatccttgact--c--attttcttgcttgtgtatcttt i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 211941 130 + 2521317 tatttatgtacttataaagcttatagattttataaaacattattg---tgcttattgtttgta-tcgt-tatatttcaaattcagttttgctggatgtaaaaatccttgact--c--attttcttgcttgtgtatcttt i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1703056 130 - 2415367 tatttacgtacttataaagcttatagattttataaaacgttattg---tgcttcttgtttgta-tcgt-tatatttgaaattcagttttgctggatgtaaaaatccttgact--c--attttcttgcttgtgtatcttt i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142773731 130 - 204313951 tatttacgtacttataaatcttata-attttataaaactgtattg---tgcttattg-ttgta-tctt-tatgtctgaaatttagttttgctggatataaaaatccttgatt--catattttcttgcttgtatgtcttt i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2172626 131 + 10068113 tatttacgtacttacaaaacttaca-attttataaaaccgtattg---tgcttattgtttgta-tctt-tatgtttgaaatttagttttgctggatataaaaatgcttgatt--cgtattttcttgcttgtatgtcttt i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 28368 131 - 709587 tatttacgtacttacaaaacttaca-attttctaaaaccgtattg---tgcttattgtttgta-tctt-tatgtttgaaatttagttttgctggatgtaaaaatccttgatt--tgtattttcttgcttgtatgtcttt i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1109170 131 - 2246441 tatttacgtacttgtaaaacttaca-attttataaaactgtattg---tgcttattgtttgta-tctt-tatgtttgaaatttagttttgctggatataaaaatccttgatt--cgtattttcttgcttgtatgtcttt i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 700432 121 - 940639 tatttatatacttacaaaacttacagat--------actttattg---agcttattatttgta-tttt-tatatttgatattcagctttactggatataaaaatccttgact--c--atttgcttgcttgtgtatctt- i proCoq1.NW_012152163v1 C 0 C 0 s otoGar3.GL873522 1200310 123 + 48283576 tatttatatacttacaaaacttacagat--------actttattg---tgctt-ctagttgta-tttt-aacatttgatgttcagctttgctgcatgtaaaaatccttgactgat--attttcttgcttgtgtatcttt i otoGar3.GL873522 C 0 I 289 s mm10.chr13 65957409 121 - 120421639 TATTGAAGGAGTTATATACTCTGTAGACTTGTAGATACTGTACCT---CGCTT----TTTGTG-TTTA-TGTATTGGA----Tagttttgctaggtataacagtcctggatt--t--gcttttttgcttctgtgtctt- i mm10.chr13 I 863 C 0 s canFam3.chr4 37137061 123 + 88276631 ----tatatgcttattaaacttatagat--------acttaattgtgctgcttagtatttgagctctt-tataattggtagtcaattttgctgtacatgaaaatctttgatt--catattttcttgcttatacatctt- i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 218364 111 - 960158 -aattaggagcttatta--cttaca--------------atgttg---tatttattatttgtg-ccctatacgtttgaaaaccagttttgctggatataaaaatccttgact--tacattttcttgc-tgtgtat---- i dasNov3.JH562710 C 0 C 0 a score=12885226.000000 s hg38.chr5_KI270795v1_alt 16584 921 + 131892 cttaaatatggta-ctccattttcttttggcattaagtgttg-ttgtcagaaagcc----caataatctaattttct--t-------------------------------------------tttctttaaagtccactaattttgctagtctctg--tctcgatgttggtaa--ctttg----------------------------gttctgtagtctcaggtatgtgttgtgctttttaaataatgtagttca--aaa----tc-------------ttt--ttttatttcaggaatgttatcttgaatgacagttcttggtg-gtggtctattatct---ttgcttttcttcttcatcatc-----------------tcctattatTGTTTTAGCACCACAGTCCTCTT-CTGCAGTTTGATCGCTGTCT-----TTTTTCTCAGCTACCCAGAACTGAAGCCTGTGCAGTCCATCAACGCCCATCCTTCCAACTGCATCTGTATCAAGTTTGACCCCATGGGGAAGTACTTTGCCACAGGAAGTGCAGATGCTTTGGTCAGCCTCTGGGATGTGGATGAGTTAGTGTGTGTTCGGTGCTTTTCCAGGTAAGTGACTCTATCAGCACTTCCCTTGTTGGG---TACATTAATTTTATTTCATCGTGAGTGACATTGTTCCCTCCTCTTACTTGG---TAATTCTCTT-GTCT----------------CTTCTGTCCACTCTGTATCATAGGCTGGATTGGCCTGTAAGAACCCTCAGTTTCAGCCATGATGGGAAAATGCTGGCGTCAGCATCGGAAGATCATTTTATTGACATTGCTGAAGTGGAGACAGGTAA----------------CTTCATGA-------GAATCTACCGTCTTTCACCTTTGGCAGTCAGGACTTCTC-----T-----TGTGATCTCATC--TCTGCATGTGACTACTTCACCAGCATGATCATGAATGAATTTGTCTCCTTTAGACAAGTATGTTTC-----TGTTTTGACTGTCACTGCCAGGTG-GTGAGGAAGCAAAGAGTTAAGAAAT-AAACAGGCAGGTCTG-AGG-AAGG-----TGATTTAGAAAAATAT s panTro5.chr5 5265034 926 - 181907262 cttaaatatggta-ctccattttcttttggcattaagtgttg-ctgtcagaaagcc----caataatctaattttct--t-------------------------------------------tttctttaaagtccactaattttgctagtctctg--tctcgatgttggtaa--ccttg----------------------------gttctgtagtctcaggtatgtgttgtgctttttaaataatgtagttca--aaa----tc-------------ttt--ttttatttcaggaatgttatcttgaatgacagttcttggtg-gtggtctattatct---ttgcttttcttcttcatcgtc-----------------tcctattatTGTTTTAGCACCACAGTCCTCTT-CTGCAGTTTGATCGCTGTCTGTCTTTTTTTCTCAGCTACCCAGAACTGAAGCCTGTGCAGTCCATCAACGCCCATCCTTCCAACTGCATCTGTATCAAGTTTGACCCCATGGGGAAGTACTTTGCCACAGGAAGTGCAGATGCTTTGGTCAGCCTCTGGGATGTGGATGAGTTAGTGTGTGTTCGGTGCTTTTCCAGGTAAGTGACTCTATCAGCATTTCCCTTGTTGGG---TACATTAATTTTATTTCATTGTGAGTGACATTGTTCCCTCCTCTTACTTGG---TAATTCTCTT-GTCT----------------CTTCTGTCCACTCTGTATCATAGGCTGGATTGGCCTGTAAGAACCCTCAGTTTCAGCCATGATGGGAAAATGCTGGCGTCAGCATCGGAAGATCATTTTATTGACATTGCTGAAGTGGAGACAGGTAA----------------CTTCATGA-------GAATCTACCGTGTTTCACCTTTGGCAGTCAGGACTTCTC-----T-----TGTGATCTCATC--TCTGCATGTGACTACTTCACCAGCATGATCATGAATGAATTTGTCTCCTTTAGACAAGTGTGTTTC-----TGTTTTGACTGTCACTGCCAGGTG-GTGAGGAAGCAAAGAGTTAAGAAAT-AAACAGGCAGGTCTG-AGG-CAAG-----TGATTTAGAAAAATAT i panTro5.chr5 C 0 C 0 s panPan2.chr5 5527520 925 - 183735486 cttaaatatggta-ctccattttcttttggcattaagtgttg-ctgtcagaaagcc----caataatctaattttct--t-------------------------------------------tttctttaaagtccactaattttgctagtctctg--tctcgatgttggtaa--ctttg----------------------------gttctgtagtctcaggtatgtgttgtgctttttaaataatgtagttca--aaa----tc-------------ttt--ttttatttcaggaatgttatcttgactgacagttcttggtg-gtggtctattatct---ttgcttttctttttcatcgtc-----------------tcctattatTGTTTTAGCACCACAGTCCTCTT-CTGCAGTTTGATCGCTGTCTGTCT-TTTTTCTCAGCTACCCAGAACTGAAGCCTGTGCAGTCCATCAACGCCCATCCTTCCAACTGCATCTGTATCAAGTTTGACCCCATGGGGAAGTACTTTGCCACAGGAAGTGCAGATGCTTTGGTCAGCCTCTGGGATGTGGATGAGTTAGTGTGTGTTCGGTGCTTTTCCAGGTAAGTGACTCTATCAGCACATCCCTTGTTGGG---TACATTAATTTTATTTCATTGTGAGTGACATTGTTCCCTCCTCTTACTTGG---TAATTCTCTT-GTCT----------------CTTCTGTCCACTCTATATCATAGGCTGGATTGGCCTGTAAGAACCCTCAGTTTCAGCCATGATGGGAAAATGCTGGCGTCAGCATCGGAAGATCATTTTATTGACATTGCTGAAGTGGAGACAGGTAA----------------CTTCATGA-------GAATCTACCGTCTTTCACCTTTGGCAGTCAGGACTTCTC-----T-----TGTGATCTCATC--TCTGCATGTGACTACTTCACCAGCATGATCATGAATGAATTTGTCTCCTTTAGACAAGTGTGTTTC-----TGTTTTGACTGTCACTGCCAGGTG-GTGAGAAAGCAGAGAGTTAAGAAAT-AAACAGGCAGGTCTG-AGG-AAAG-----TGATTTAGAAAAATAT i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1625245 924 + 3967317 cttaaatacggta-ctccattttcttttggcattcagtgttg-ctgtcagaaagcc----caataatctaaatttct--t-------------------------------------------tttctttaaagtccactaattttgctagtctctg--tctcgatgttggtaa--ctttg----------------------------gttctgtagtctcaggtatgtgttgtgctttttaaataatgtagttca--aaa----tc-------------tta--ttttatttcaggaatgttatcttgaatgacagttcttggtg-gtggtctattatct---ttgcttttcttcttcatcgtc-----------------tcctgttatTGTTTTAGCACCACAGTCCTCTT-CTGCAGTTTGATCGCTGTCTGTCT-TTTTTCTCAGCTACCCAGAACTGAAGCCTGTGCAGTCCATCAATGCCCATCCTTCCAACTGCATCTGTATCAAGTTTGACCCCATGGGGAAGTACTTTGCCACAGGAAGTGCAGATGCTTTGGTCAGCCTCTGGGATGTGGATGAGTTAGTGTGTGTTCGGTGCTTTTCCAGGTAAGTGACTCTATCAGCACTTCCCTTGTTGGG---TACATTAATTTTATTTCATCGTGAGTGACATTGTT-CCTCCTCTTACTTGG---TAATTCTCTT-GTCT----------------CTTCTGTCCACTCTGTATCATAGGCTGGATTGGCCTGTAAGAACCCTCAGTTTCAGCCATGATGGGAAAATGCTGGCGTCAGCATCGGAAGATCATTTTATTGACATTGCTGAAGTGGAGACAGGTAA----------------CTTCATGA-------GAATCTACTGTCTTTCACCTTTGGCAGTCAGGACTTCTC-----T-----TGTGATCTCATC--TCTGCATGTGACTACTTCACCAGCATGATCATGAATGAATTTGTCTCCTTTAGACAAGTGTGTTTC-----TGTTTTGACTGTCACTGCCAGGTG-GTGAGGAAGCAAAGAGTTAAGAAAT-AAATAGGCAGGTCTG-AGG-AAAG-----TGATTTAGAAAAATAT i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4477138 923 + 163208435 cttaaatacggta-ctccattttcttttggcatcaagtgttg-ctgtcagaaagcc----tgataatctaattttct--t-------------------------------------------tttctttaaagtccactaattttactagtctctg--tctcgatgttggtag--ctttg----------------------------gttctgtagtctcaggtatgtgtcgtgctttttaaataatgtagttca--aaa----tc-------------ttt--ttttatttcaggaatgttatcttgaatgacagttcttggtg-gtggtccattatct---atgcttttcttcttcattgtc-----------------tcctattatTGTTTTAGCACCACAGTCCTCTT-CTGCAGTTTGATCGCTGTCTGTCT-TTTTTCTCAGCTACCCAGAACTGAAGCCTGTGCAGTCCATCAACGCCCATCCTTCCAACTGCATCTGTATCAAATTTGACCCCATGGGGAAGTACTTTGCCACAGGAAGTGCAGATGCTTTGGTCAGCCTCTGGGATGTGGATGAGTTAGTGTGTGTTCGGTGCTTTTCCAGGTAAGTGACTCTATCAGCACTTTCCTTGTTGGG---TGCATTAATTTTACTTCATCGTGAGTGACATTGTTCCCTCCTCTTACTTGG---TAATTCTCT---TCT----------------CTTCTGTCCACTCTGTATCATAGGCTGGATT-GCCTGTAAGGACCCTCAGTTTCAGCCATGATGGGAAAATGCTGGCGTCAGCATCAGAAGATCATTTTATTGACATTGCTGAAGTGGAGACAGGTAA----------------ATTCATGA-------GAATCTACCGTCTTTCACCTTAGGCAGTCAGGACTTCTC-----T-----AGTGATCTCATC--TCTGCACGTGACTACTTAACCAGCATGATCATGAATGAATTTGTCTCCTTTAGACAAGGGTGTTTC-----TGTTTTGACTGTCACTGCCAGGTG-GTGAGGAAGCAAAGAGTTCAGAAATAAAACAGGCAGTTCTG-AGG-AAAG-----TGATTTAGAAAAATAT i nomLeu3.chr2 C 0 I 148 s rheMac8.chr6 5709981 925 - 180051392 cttaaatatggta-ctccattttcttttggcattaagtgttg-ctgtcagaaagcc----tgataatctaattttct--t-------------------------------------------tttctttaaagtccactaattttactagtctgtg--tctcgatgttggttg--ctttg----------------------------gttctgtagtctcatgtatgtgttgtgctttttaaataatgtagttca--aaa----tc-------------ttt--ttttatttcaggaatattatcttgaatgacagttcttagtg-gtggtgcattatct---ttgcttttcttcttcattgtc-----------------tcctattatTATTTTAGCACCACAGTCCTCTT-CTGCAGTTTGATCACTGTCTGTCT-TGTTTCTCAGCTACCCAGAACTGAAGCCTGTGCAGTCCATCAACGCCCATCCTTCCAACTGCATCTGTATCAAGTTTGACCCGATGGGGAAGTACTTTGCCACAGGAAGTGCAGATGCTTTGGTTAGCCTCTGGGATGTGGATGAGTTAGTGTGTGTTCGGTGCTTTTCCAGGTAAGTGACTCTATCAGCACTTTCCTTGTTGGG---TACATGAATTTTATTTTATTGTGAGTGACATTGTTCCCTCCTCTTATTTGG---TAATTCTCAT-GTCT----------------CTTCTGTCCACTCTGTATCATAGGCTGGATTGGCCTGTAAGGACCCTCAGTTTCAGCCATGATGGGAAAATGCTGGCGTCAGCATCGGAAGACCATTTTATTGACATTGCTGAAGTGGAGACAGGTAA----------------CCTCATGA-------GAATCTACTGTCTTTCACCTTTGGCATTCAGGACTTCTC-----T-----TGTGATCTCATC--TCTGCACGTGACTGCTTCATCAGCATTATCATGAATGAATTTGTCTCCTTTAGACAAGTGTGTTTA-----TGTTTTGACTGTCACTGCTGGGTA-GTGAGGAAGCAAAGAGTTAAGAAAT-AAACAGGCAGGTCTG-AGG-AAAC-----TGATTTAGAAAAATAT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5901775 925 - 181584905 cttaaatatggta-ctccattttcttttggcattaagtgttg-ctgtcagaaagcc----tgataatctaattttct--t-------------------------------------------tttctttaaagtccactaattttactagtctgtg--tctcgatgttggttg--ctttg----------------------------gttctgtagtctcatgtatgtgttgtgctttttaaataatgtagttca--aaa----tc-------------ttt--ttttatttcaggaatattatcttgaatgacagttcttggtg-gtggtgcattatct---ttgcttttcttcttcattgtc-----------------tcctattatTATTTTAGCACCACAGTCCTCTT-CTGCAGTTTGATCACTGTCTGTCT-TGTTTCTCAGCTACCCAGAACTGAAGCCTGTGCAGTCCATCAACGCCCATCCTTCCAACTGCATCTGTATCAAGTTTGACCCGATGGGGAAGTACTTTGCCACAGGAAGTGCAGATGCTTTGGTTAGCCTCTGGGATGTGGATGAGTTAGTGTGTGTTCGGTGCTTTTCCAGGTAAGTGACTCTATCAGCACTTTCCTTGTTGGG---TACATGAATTTTATTTTATTGTGAGTGACATTGTTCCCTCCTCTTATTTGG---TAATTCTCAT-GTCT----------------CTTCTGTCCACTCTGTATCATAGGCTGGATTGGCCTGTAAGGACCCTCAGTTTCAGCCATGATGGGAAAATGCTGGCGTCAGCATCGGAAGACCATTTTATTGACATTGCTGAAGTGGAGACAGGTAA----------------CCTCATGA-------GAATCTACTGTCTTTCACCTTTGGCATTCAGGACTTCTC-----T-----TGTGATCTCATC--TCTGCACGTGACTGCTTCATCAGCATTATCATGAATGAATTTGTCTCCTTTAGACAAGTGTGTTTA-----TGTTTTGACTGTCACTGCTGGGTA-GTGAGGAAGCAAAGAGTTAAGAAAT-AAACAGGCAGGTCTG-AGG-AAAC-----TGATTTAGAAAAATAT i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 930852 925 - 16193990 cttaaatatggta-ctccattttcttttggcattaagtgttg-ctgtcagaaagcc----tgataatctaattttct--t-------------------------------------------tttctttaaaatccactaattttactagtctgtg--tctcgatgttggttg--ctttg----------------------------gttctgtagtctcatgtatgtgttgtgctttttaaataatgtagttca--aaa----tc-------------ttt--ttttatttcaggaatattatcttgaatgacagttcttggtg-gtggtgcattatct---ttgcttttcttcttcattgtc-----------------tcctattatTATTTTAGCACCACAGTCCTCTT-CTGCAGTTTGATCACTGTCTGTAT-TGTTTCTCAGCTACCCAGAACTGAAGCCTGTGCAGTCCATCAACGCCCATCCTTCCAACTGCATCTGTATCAAGTTTGACCCGATGGGGAAGTACTTTGCCACAGGAAGTGCAGATGCTTTGGTTAGCCTCTGGGATGTGGATGAGTTAGTGTGTGTTCGGTGCTTTTCCAGGTAAGTGACTCTATCAGCACTTTCCTTGTTGGG---TACATGAATTTTATTTTATTGTGAGTGACATTGTTCCCTCCTCTTATTTGG---TAATTCTCAT-GTCT----------------CTTCTGTCCACTCTGTATCATAGGCTGGATTGGCCTGTAAGGACCCTCAGTTTCAGCCATGATGGGAAAATGCTGGCGTCAGCATCGGAAGACCATTTTATTGACATTGCTGAAGTGGAGACAGGTAA----------------CCTCATGA-------GAATCTACTGTCTTTCACCTTTGGCATTCAGGACTTCTC-----T-----TGTGATCTCATC--TCTGCACGTGACTGCTTCATCAGCATTATCATGAATGAATTTGTCTCCTTTAGACAAGTGTGTTTA-----TGTTTTGACTGTCACTGCTGGGTA-GTGAGGAAGCAAAGAGTTAAGAAAT-AAACAGGCAGGTCTG-AGG-AAAC-----TGATTTAGAAAAATAT i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1747871 924 - 21434487 cttaaatatggta-ctccattttcttttggcattaagtgttg-ctgtcagaaagcc----tgataatctaattttct--t-------------------------------------------tttctttagagtccactaattttactagtctgtg--tctcgatgttggttg--ctttg----------------------------gttctgtagtctcatgtatgtgttgtgctttttaaataatgtagttca--aaa----tc-------------ttt--ttttatttcaggaatattatcttgaatgacagttcttggtg-gtggtgcattatct---ttgcttttcttcttcattgtc-----------------tcctattatTA-TTTAGCACCACAGTCCTCTT-CTGCAGTTTGATCACTGTCTGTCT-TGTTTCTCAGCTACCCAGAACTGAAGCCTGTGCAGTCCATCAACGCCCATCCTTCCAACTGCATCTGTATCAAGTTTGACCCGATGGGGAAGTACTTTGCCACAGGAAGTGCAGATGCTTTGGTTAGCCTCTGGGATGTGGATGAGTTAGTGTGTGTTCGGTGCTTTTCCAGGTAAGTGACTCTATCAGCACTTTCCTTGTTGGG---TACATGAATTTTATTTTATTGTGAGTGACATTGTTCCCTCCTCTTATTTGG---TAATTCTCAT-GTCT----------------CTTCTCTCCACTCTGTATCATAGGCTGGATTGGCCTGTAAGGACCCTCAGTTTCAGCCATGATGGGAAAATGCTGGCGTCAGCATCGGAAGACCATTTTATTGACATTGCTGAAGTGGAGACAGGTAA----------------CCTCATGA-------GAATCTACTGTCTTTCACCTTTGGCATTCAGGACTTCTC-----T-----TGTGATCTCATC--TCTGCACGTGACTACTTCATCAGCATTATCATGAATGAATTTGTCTCCTTTAGACAAGTGTGTTTA-----TGTTTTGACTGTCACTGCTGGGTA-GTGAGGAAGCAAGGAGTTAAGAAAT-AAACAGGCAGGTCTG-AGG-AAAC-----TGATTTAGAAAAATAT i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4716737 928 - 82825804 cttaaatatggta-ctccattttcttttggtattaagtgttg-ctgtcagaaagcc----tgataatctaattttct--t-------------------------------------------tttctttaaagtccactaattttactagtctatg--tctcgatgttgattg--ctttg----------------------------gttctgtagtctcatgtatgtgttgtgctttttaaataatgtagttca--aaa----tc-------------ttt--ttttatttcaggaatattgtcttgaatgacagttcttggtg-gtggtgcattatct---ttgcttttcttcttcattgtc-----------------tcctcttatTATTTTAGCACCACAGTCCTCTT-CTGCAGTTTGATCACTGTCTGTCT-TGTTTCTCAGCTACCCAGAATTGAAGCCTGTGCAGTCCATCAACGCCCATCCTTCCAACTGCATCTGTATCAAGTTTGACCCAATGGGGAAGTACTTTGCCACAGGAAGTGCAGATGCTTTGGTTAGCCTCTGGGATGTGGATGAGTTAGTGTGTGTTCGGTGCTTTTCCAGGTAAGTGACTCTATCAGCACTTTCCTTGTTGGGTCCTACATGAATTTTATTTTACTGTGAGTGACATTGTTCCCTCCTCTTATTTGG---TAATTCTCAT-GTCT----------------CTTCTGTCCACTCTGTATCATAGGCTGGATTGGCCTGTAAGGACCCTCAGTTTCAGCCATGATGGGAAAATGCTGGCATCAGCATCAGAAGACCATTTTATTGACATTGCTGAAGTGGAGACAGGTAA----------------CCTCATGA-------GAATCTACTGTCTTTCACCTTTGGCATTCAGGACTTCTC-----T-----TGTGATCTCATC--TCTGCACGTGACTACTTCATCAGCATTATCATGAATGAATTTGTCTCCTTTAGACAAGTGTGTTTA-----TGTTTTGACTGTCACTGCCAGGTA-GTGAGGAAGCAAAGAGTTAAGAAAT-AAACAGGCAGGTCTG-AGG-AAAC-----TGATTTAGAAAAATAT i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 212071 925 + 2521317 cttaaatatggta-ctccattttcttttggcattaagtgttg-ctgtcagaaagcc----tgataatctaattttct--t-------------------------------------------tttctttagagtccactaattttactagtctgtg--tctcgatgttggttg--ctttg----------------------------gttctgtagtctcatgtatgtgttgtgctttttaaataatgtagttca--aaa----tc-------------ttt--ttttatttcgggaatattatcttgaatgacagttcttggtg-ttggtgcattatct---ttgcttttcttcttcattgtc-----------------tcctattatTATTTTAGCACCACAGTCCTCTT-CTGCAGTTTGATCACTGTCTGTCT-TGTTTCTCAGCTACCCAGAACTGAAGCCTGTGCAGTCCATCAACGCCCATCCTTCCAACTGCATCTGTATCAAGTTTGACCCGATGGGGAAGTACTTTGCCACAGGAAGTGCAGATGCTTTGGTTAGCCTCTGGGATGTGGATGAGTTAGTGTGTGTTCGGTGCTTTTCCAGGTAAGTGACTCTATCAGCACTTTCCTTGTTGGG---TACATGAATTTTATTTTATTGCGAGTGACATTGTTCCCTCCTCTTATTTGG---TAATTCTCAT-GTCT----------------CTTCTCTCCACTCTGTATCATAGGCTGGATTGGCCTGTAAGGACCCTCAGTTTCAGCCATGATGGGAAAATGCTGGCGTCAGCATCGGAAGACCATTTTATTGACATTGCTGAAGTGGAGACAGGTAA----------------CCTCATGA-------GAATCTACTGTCTTTCACCTTTGGCATTCAGGACTTCTC-----T-----TGTGATCTCATC--TCTGCACGTGACTACTTCATCAGCATTATCATGAATGAATTTGTCTCCTTTAGACAAGTGTGTTTA-----TGTTTTGACTGTCACTGCTGGGTA-GTGAGGAAGCAAGGAGTTAAGAAAT-AAACAGGCAGGTCTG-AGG-AAAC-----TGATTTAGAAAAATAT i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1703186 903 - 2415367 cttaaatatggta-ctccattttcttttggcattaagtgttg-ctgtcag--------------------attttct--t-------------------------------------------tttctttaaagtccactagttttgctagtctgtg--tctcgatgttggttg--ctctg----------------------------gttctgtagtctcaggtatgtgttgtgctttttaaataatgtagttca--aaa----tc-------------tct--ctttatttcaggaatgttatcttgaatgacagttcttggtg-gtggtgcattatct---ttgcttttcttcttcattgtc-----------------tcctattat---TTTAGCACCACAGTCCTCTT-CTGCAGTTTGATCACTGTCTGTCT-TGTTTCTCAGCTACCCAGAACTGAAGCCTGTGCAGTCCATCAACGCCCATCCTTCCAACTGCATCTGTATCAAGTTTGACCCGATGGGGAAGTACTTTGCCACAGGAAGTGCAGATGCTTTGGTTAGCCTCTGGGATGTGGATGAGTTAGTGTGTGTTCGGTGCTTTTCCAGGTAAGTGACTCTATCAGCACTTTCCTTGTTGAG---TACATGAATTTTATTTTATCGTGAATGACATTGTTCCCTCCTCTTACTTGG---TAATTCTCAT-GTCT----------------CTTCTGTCCACTCTGTATCATAGGCTGGATTGGCCTGTAAGGACCCTCAGTTTCAGCCATGATGGGAAAATGCTGGCGTCAGCATCGGAAGACCATTTTATTGACATTGCTGAAGTGGAGACAGGTAA----------------CCTCATGA-------GAATCTACTGTCTTTCACCTTTGGCATTCAGG-CTTCTC-----T-----TGTGATCTCATC--TCTGCATGTGACTACTTCATCAGCATTATCATGAATGAATTTGTCTCCTTTAGACAAGTGTGGTTA-----TGTTTTGAC--TCACTGCCGGATA-GTGAGGAAGCAAAGAGTTAAGAAAT-AAACAGGCAGGTCTG-AGA-AAAG-----TGATTTAGAAAAATAT i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142773861 930 - 204313951 cttaaatatggta-ccccattttcttttggcgttaagtgttg-ctatcagaaagcc----taataatctaattgtct--t-------------------------------------------tttcttta-agcccgctaattttactagtctatt--tcttgatgttggtag--tgttg----------------------------gctgtgtagtctcaggtatgtgttgtgcgttttaaataacgtagttca--aaa----tc-------------tct--ctttatttcaggaactttatcttgaatgactgtttttggtg-gtattccattgcct---ttcgatttcttcttcATTGTCTCTATATGTCTCCATTGTCTCCTGATTATTTTAGCACCACAGTCCTCTT-CTGCAGTTTGATTGCTGTCTGTCT-TGTTTCTCAGTTACCCAGAACTGAAGCCTGTGCAGTCCATCAACGCCCATCCTTCCAACTGCATCTGTATCAAGTTTGACCCCATGGGGAAGTACTTTGCCACAGGAAGTGCAGATGCTTTGGTTAGCCTCTGGGATGTGGACGAGTTAGTGTGTGTTCGGTGCTTTTCCAGGTAAGTGACTCTATCAGCACTTTCCTTGTTGGG---TACATTAATTTGATTTCATCATGAGTGACATTGTACCCTCCTCTTAGTTGG---TAATTCTCA--------------------------TGACCACTCTG--TCATAGGCTGGATTGGCCTGTAAGGACTGTCAGTTTCAGCCACGATGGGAAAATGCTGGCGTCAGCATCGGAAGATCATTTTATTGACATTGCTGAAGTGGAGACAGGTAA----------------CCTCATGA-------GAATCGACTGTCTTTCCTCTTTGGCAGTCAGGACTTCTG-----T-----TGTGATCTCATC--TCTGCACGTGACCACTTCACCAGCGTTATCATGAATGAATTTGTCTCCTTTAGACAAGTGTGTTTA-----TGTTTTGGCTGTGACTGCCAGGTA-TTCAGGGAGCAAAGAGTTAAGAAAT-AAACAGGCAGGTCTG-AGG-AAAG-----TGATTTAGGAAAATAT i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2172757 909 + 10068113 cttaaatatggta-cttcattttcttttggtgtt--gtgttg-ctatcagaaagcc-------taatctaattttct--t-------------------------------------------tttcttta-agtccgctaattttactagtctgtt--tcttgatgttggtag--cgttg----------------------------gctctgtagtctcaggtatgtgtcgtgcgttttaaataatgtagttca--aaa----tc-------------tct--ttttatttcaggaacattatcttgaatgacagcttttggtg-gtattccattgcct---ttgtatttctttttcattgtc-----------------tcctgtGGTTATTTTAGCACCACAGTCCTCTT-CCGCAGTTTGATCGCCGTCTGTCT-TGTTTCTCAGTTACCCAGAACTGAAGCCTGTGCAGTCCATCAACGCCCATCCTTCCAACTGCATCTGTATCAAGTTTGACCCCATGGGGAAGTACTTTGCCACAGGAAGTGCAGATGCTTTGGTTAGCCTCTGGGATGTGGACGAGTTAGTGTGTGTTCGGTGTTTTTCCAGGTAAGTGACTCTATCAGCACTTTCCTCGTTGGG---TGCATTAATTTGATTTCATTATGAGTGACATTGTACCCTCCTCTTACTTGG---TAATTCTCA--------------------------TGACCACTCTG--TCATAGGCTGGATTGGCCTGTAAGGACTCTCAGTTTCAGCCACGATGGGAAAATGCTGGCGTCAGCATCAGAAGATCATTTTATTGACATTGCTGAAGTGGAGACAGGTAA----------------CCTCACGA-------GAATCTATTGTCTTTCATCTTTGGCAGTCAGGACTTCTG--TTAT-----TGTGATCTCATC--TCTGCACGTGACCACTTCACCAGCATTATCATGAATGAATTTGTCTCCTTTAGACAAGTGGGTTTA-----TGTTTTGGCTGTGACTGCCAGGGA-CTGAGGGAGC--AGAGTTAAGAAAT-AAACAGGCAGGTCTG-AGG-AAAG-----TGATTTAGGAAAATAT i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 28499 916 - 709587 cttaaatatggta-ctccattttcttctggtgttaagtgttg-ctatcagaaagcc----taatagtctaattttct--t-------------------------------------------tttcttta-agtctgctaattttactagtctatt--tcttgatgttggtag--ctttg----------------------------gctgtgtagtctcaggtatgtgttgtgtgttttaaataatgtagttca--aaa----tc-------------tct--ttttatttcaggaacgttatcttgaatgacagtttttggtg-gtattccattgcct---ttggatttcttcttcattgtt-----------------tcctatgatTATTTTAGCACCACAGTCCTCTT-CTGCAGTTTGATCGCTGTCTGTCT-TGTTTCTTAGTTACCCAGAACTGAAGCCTGTGCAGTCCATCAACGCCCATCCTTCCAACTGCATCTGTATCAAGTTTGACCCCATGGGGAAGTACTTTGCCACAGGAAGTGCAGATGCTTTGGTTAGCCTCTGGGATGTGGACGAGTTAGTGTGTGTTCGGTGCTTTTCCAGGTAGGTGACTCTATCAGCACTTTCCTTGTTGGG---TATGTTAATTTGATTTCATCATGAGTGACATTGTACCCTCCTCTTACTTGG---TAATTCTCA--------------------------TGATCACTCTG--TCATAGGCTGGATTGGCCTGTAAGGACTCTCAGTTTCAGCCATGATGGGAAAATGCTGGCGTCAGCATCGGAAGATCATTTTATTGACATCGCTGAAGTGGAGACAGGTAA----------------CCTCACGA-------GAATCTACTGTCTTTCATCTTTGGCAGTCAGGACTTCTG--TTAT-----TGTGATCTCATC--TCTGCACGTGACCACTTCACCAGCATTATCATGAATGAATTTGTCTCCTTTAGACAAGTGTGTTTA-----TGTTTTGGCTGTGACTGCCAGGGA-TTGAGGGAGCAAAGAGTTAAGGAAT-AAACAGGCAGGTCTG-AGG-AAAG-----TGATTTAGGAAAATat i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1109301 914 - 2246441 cttaaatatgata-ctccattttctcttggtgttaagtgttg-ctctcagaaagcc----taataatctaattttct--t-------------------------------------------tttcttta-agtccgctaattttactagactatt--tcttaatgttggtag--cgttg----------------------------gctgtgtagtcttaggtacgcgttgtgcgttttaaataatgtagttca--aaa-------------------tct--ttttatttcaggaacgttatcttgaatgacagtttttggtg-gtattccattgcct---ttggatttcttcttcattgtc-----------------tcctatgatTATTTTAGCACCACAGTCCTCTT-CTGCAGTTTGATTGCTGTCTGTCT-TGTTTCTCAGTTACCCAGAACTGAAGCCTGTGCAGTCCATCAACGCCCATCCTTCCAACTGCATCTGTATCAAGTTTGACCCCATGGGGAAGTACTTTGCCACAGGAAGTGCAGATGCTTTGGTTAGCCTCTGGGATGTGGACGAGTTAGTGTGTGTTCGGTGCTTTTCCAGGTAAGTGACTCTATCAGCACTTTCCTTGTTGGG---TACATTAATTTGATTTCGTCATGAGTGACATTGTACCCTCCTCTTACTTGG---AAATTCTCA--------------------------TGACCACTCTG--TCATAGGCTGGATTGGCCTGTAAGGACTCTCAGTTTCAGCCATGATGGGAAAATGCTGGCGTCAGCATCGGAAGATCATTTTATTGACATCGCTGAAGTGGAGACAGGTAA----------------CCTCATGA-------GAATCTACTGTCTTTCATCTTTGGCAGTGAGGACTTCTG--TTAT-----CGTGATCTCATC--TCTGCACGTGACCACTTTACCAGCATTATCATGAATGAATTTGTCTCCTTTAGACAAGTGTGTTTA-----TGTTTTGGCTGTGACTGCCAGGGA-TTGAGGGAGCAAAGAGTTAAGAAAT-AAACCGGCATGTCTG-AGG-AAAG-----TGATTTAGGAAAATAT i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 700553 921 - 940639 ---aaatatggta-ctctacttttttttggcattaagtgtcg-ctgtttaacagtc-tggtgataattgaattttct--t-------------------------------------------tttctttaaag-----------------tctgtg--tcttgatgttggttt--g--------------------------------agtttatattctcaggtgtgtgttgtgctctttcaat-atgtagtttg--aaa----acagtatgtgttttgaaa--tcttatttcaggaaaattaccttgaattacagtttttgatt-ttgttctattgtcttatttgattttcttcttcactgtc------------------tccgttattg-tcAAGCACCGCAGTCATTGT-CTTCAGTTTGATTGCCGTCTGTCT-CGTTTCTCAGCTACCCAGAACTGAAGCCTGTGCAGTCCATCAACGCCCATCCTTCTAACTGCATCTGTATCAAGTTTGACCCCATGGGGAAGTACTTTGCTACAGGAAGTGCAGACGCTTTGGTCAGCCTTTGGGATGTGGATGAGTTAGTGTGTGTTCGGTGCTTTTCCAGGTAAGTGATCTGCCCAGCACTTTCCTTGTTGGG---TAAATTAATTTTATTTCATCCTCGGTGAAATTATATCCTCCTCTAACTGGG---TAATTCTAATGGTCT----------------CT--TGTCCACTCCATATTATAGGCTGGATTGGCCTGTGCGGACGCTCAGTTTTAGCCATGATGGGAAAATGCTGGCCTCAGCATCAGAAGATCATTTTATTGACATAGCTGAAGTAGAAACAGGTAA----------------CTTAACGA-------GAATCTTCTGTCTTTCATCTGTGGTCAACA-GACTTCTC-----TTGTCGTGTGTTTTCATC--TCTGCACATTACTACTTCACCAGCCTTATCATAAGTGAATTTGTCTCCTTAAGGCAAGTGTCTTTG-----TATTATGACTGTTACTGCCAGGTA-ATGAGGGAGCAAAGAGTTACGAAAG-AAACAGGCAGGGCTG-AAGTAAAG-----TGATTTAGGAAAATAT i proCoq1.NW_012152163v1 C 0 C 0 s otoGar3.GL873522 1200722 942 + 48283576 cttaaatagagtg-cttcatttgttttgggcataaagcgtca-ctgtcaaaaagtc-ttatgataatagagttttct--t-------------------------------------------tttctttaaag------------aaaattctgta--tcttgatgttagttg--gtttatattctcctgtatgtgttacacttttatattttatattctcctgtatgtgttacactttttcaat-atgtagtttg--aaa----cc---------------t--ttttgtttcaggaaaattgtcttgaattataattttcaata-ttgttctattgtctgtcttga-tttcttcttcactgtc-----------------ttctgttgtTG-TGAAGCATCACAGTTGTCTT-CCCCAGTTTGATTG----CTGTCT-TGTTTCTCAGCTACCCAGAACTGAAGCCTGTGCAGTCCATCAATGCCCATCCTTCTAACTGCATCTGTATCAAGTTTGACCCCATGGGGAAATACTTTGCTACAGGAAGTGCGGATGCTTTGGTCAGCCTTTGGGATGTGGATGAGTTAGTATGTGTTCGGTGCTTTTCTAGGTAAGTGATCTGCCCAGCACTTTCCTTGTTAGG---TAAATTAATTTTATTTTATCCTGGGTGAAATTGTATGTTCCTCATATTGGA---TAATTCTAAT-GTCT----------------CC--TATTCACTCCATA--ATAGGCTGGATTGGCCTGTGAGGACGCTCAGTTTTAGCCATGATGGAAAGATGCTGGCATCAGCATCAGAAGATCATTTTATTGACATTGCTGAAGTAGAAACAGGTAA----------------CTTAATGA-------GAATCTTCTGTTTTTTACCTGTGGTCAACAGGACTTCTC-----TTGTCATGTGTTTTCATC--TCTGCACGTTACTACTTCACCAGC--TATCATAAATCAGTTGGTTTCCTTAAGGCAGGTTAGTTTGTTTGATATTATGACCATTACTGCCAGGTA-ATGAGGGGGCAGAGACGTAGGAAGG-AAACAGGCAGGACTG-AGG-AAAG-----TGATTTAGGAAACTGT i otoGar3.GL873522 I 289 C 0 s mm10.chr13 65957530 846 - 120421639 ---aggtgtgctg-ccc---tttcttttgccccagagtaatg-ctctcaagaagtc----tag------agctgtctaat-------------------------------------------tttctGTGAGGTGCAGTAATCTCACTGGTTCA----TCTAGATGCTAGATGGTCCCTG----------------------------CTCATGTATATGTAGGCCTGTGTTGTGCTCTT--------GTACTTGAGCAAA----CC-------------TTTTGTTTTATTCC-------------------------TTTAGGG-AAGTTTTGTTACTG---TT-----------------TT-----------------TTCCCTTGGTATCATAATGCCTTGGCCCTCTT-CTACACATTA--TGCTATGCGTCT-TGTTTCTCAGCTACCCAGAATTGAAGCCTGTGCAGTCCATCAATGCCCATCCTTCTAACTGCATCTGTATCAAGTTTGACCCCATGGGGAAATACTTTGCCACAGGAAGTGCAGATGCCTTGGTCAGCCTTTGGGACGTTGACGAGTTAGTGTGCGTGCGGTGCTTTTCCAGGTGTGTAACT--GACGGT-CTTTTCCTGT--GG---GAAATCAACCTT------------------------TCCTCTTTCATTTGGGGATAACTCGGAT-GTTTTGGGGGGTAACTGATGTTTCTCTCCATCCTG--TCATAGACTAGATTGGCCTGTGAGGACCCTCAGTTTTAGCCACGATGGGAAAATGCTGGCATCGGCTTCGGAGGACCATTTCATTGATATAGCTGAAGTCGAGACAGGTAT----------------CTTAATTT-------GAATCCTTTGTGTTTAGTATCCGGC--CTAGGCTTTTTC-----T-----GGTCACGTTTTTAGTCTGTACACTGCTACTTCACCAGTGGTATCA--GATGGGTTTGTGTTGTTGAGACATTTGT----------TGATAGGACTGTCAGTTTCCTGTC-GGAGGGAAG------GACAAGAGCT-GAGC-GCCAGGTCTG-AAG-GGAGCACTTTGCTTTTGCATGATTT i mm10.chr13 C 0 C 0 s canFam3.chr4 37137184 829 + 88276631 ---aaatatattatccccattttcttttgtcataaagtcttc-gtgtcagaaaagcctgacgataatctaatttttt--t-------------------------------------------tttttt--aagtcCA-------------------------------GGAAA--GTTTG--------------------------------------------------TTTTACTT----------GCAGTCTG--ATA----TT-------------TGT--TCT----------------------------------------------GTTGTCT---TTGA-TTTCTTCTTCAGTATC-----------------TCCTCTTGTCATCTTAGGACCATAGTCCCCTC-CCCTAGTTTAATTGCGGTCTGTCT-TGTTTCTCAGCTACCCAGAGCTGAAGCCTGTGCAGTCCATCAATGCCCATCCTTCCAACTGCATCTGTATCAAGTTTGACCCCATGGGAAAGTACTTTGCCACAGGAAGTGCAGATGCCTTGGTCAGCCTCTGGGATGTGGATGAGTTGGTGTGTGTTCGGTGCTTTTCCAGGTAAGTGGTTCTGCCAGCACTTTCCTTGTCGGA---TAAATTAATTTGATTTCATTTTGGGTGAAATTGTGCCCTTCTCTTACTGGG---TTATTCTAAC-ATCT----------------CCTCTGTCTCCTCTGT-TATTAGGCTGGATTGGCCTGTGAGGACCCTCAGTTTTAGCCATGATGGAAAAATGCTGGCCTCAGCTTCAGAAGATCATTTTATTGACATTGCTGAAGTAGAGACAGGTAACTGAA---------ACCTTCACTACTGTAATGAGTCTTCTGTCTGTCATCTGCAGCCATCAGGACTTATT-----CTGTCGTGTGTTTTCATC--TT--CACATTACTACCACACCTTCATTAGCATAAATGAATTT-TCTTCTTAGGACAGGCTTGTTTA-------TTATGACTGTTATAGTCAGGTGCATAAGGGAGCAAAGAGTTGAGAAAG-G----GGCGGGTCTGAAAG-AAAG-----TGATTTAGGAAAATAT i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 218475 938 - 960158 cttgaatatgtta-cttcattttcttttgatgtaaaatgttgtcagtctga---------tgataatatgtttcttt--tccttataatacacttgccccttatgcctagatgcccaaagacctttctttaaagtcagataattttcctagtatgtgtatgttgatgttggtta--atctg----------------------------gattcatattctcaagtatgtggtatactctttaaatatgttacttga--aaaaaagtt-------------ttt--tttaattgcaagaaaacttacttgaattatagtttttcctgtttgttatattgtcc---ta-----------ctgtggtt-----------------ttcttttGTCTTCATAGTGGCACAGTCCTCTTCCCACAGTCTGATTGCTCTCTGTCT-TGTTTCTCAGTTACCCAGAGCTGAAGCCAGTCCAGTCCATCAATGCCCATCCTTCCAATTGCATCTGTATCAAGTTTGACCCCATGGGGAAGTATTTTGCCACAGGAAGTGCAGATGCTTTGGTCAGCCTTTGGGATGTGGATGAGTTAGTGTGTGTGCGGTGCTTTTCCAGGTAAACAACCCTACCAGCACTTTCCTTCTTGGA---TAAACTGATTTTATGTATTCTTAGGTAAAGTTGTGCCCTCCTCTTATTGGA---GAATTCTAAT-GTCT----------------C---TGACTACTCCATGTAATAGGCTGGATTGGCCTGTGAGGACCCTCAGTTTCAGCCATGATGGGAAAATGCTGGCCTCAGCATCAGAAGATCATTTTATTGACATTGCTGAAGTGGAGACAGGTAAGTAAAGCCCCTCCTACCTTAATGA-------GAATCT------TTTCATTCTTGGC--------CTTCTCAAATGT-----CATGTTTTCTTC--CCTGCA-----------------CATTATCAT-AATG--TTTGTCTCCTAAAGACAAGT----TTA-----TATTATGACTGTCACAGTCAATTA-ATGAAGGAGCAAAGAGTTAATAAAG-AAAGGGGCAGGTCTG-AAG-GAAA--------GCTGGaaaaatat i dasNov3.JH562710 C 0 C 0 a score=21793.000000 s hg38.chr5_KI270795v1_alt 17505 2 + 131892 -TT s panTro5.chr5 5265960 2 - 181907262 -TT i panTro5.chr5 C 0 C 0 s panPan2.chr5 5528445 2 - 183735486 -TT i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1626169 2 + 3967317 -TT i gorGor5.CYUI01015413v1 C 0 C 0 s rheMac8.chr6 5710906 2 - 180051392 -TT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5902700 2 - 181584905 -TT i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 931777 2 - 16193990 -TT i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1748795 2 - 21434487 -TT i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4717665 2 - 82825804 -TT i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 212996 2 + 2521317 -TT i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1704089 2 - 2415367 -TT i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142774791 2 - 204313951 -TT i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2173666 2 + 10068113 -TT i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 29415 2 - 709587 -tt i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1110215 2 - 2246441 -TT i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 701474 2 - 940639 -TT i proCoq1.NW_012152163v1 C 0 I 43 s otoGar3.GL873522 1201664 2 + 48283576 -TT i otoGar3.GL873522 C 0 I 17 s mm10.chr13 65958376 2 - 120421639 -CT i mm10.chr13 C 0 C 0 s canFam3.chr4 37138013 2 + 88276631 -TT i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 219413 2 - 960158 at- i dasNov3.JH562710 C 0 C 0 e nomLeu3.chr2 4478061 148 + 163208435 I a score=55521.000000 s hg38.chr5_KI270795v1_alt 17507 5 + 131892 TGATT s panTro5.chr5 5265962 5 - 181907262 TGATT i panTro5.chr5 C 0 C 0 s panPan2.chr5 5528447 5 - 183735486 TGATT i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1626171 5 + 3967317 TGATT i gorGor5.CYUI01015413v1 C 0 C 0 s rheMac8.chr6 5710908 5 - 180051392 TGATT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5902702 5 - 181584905 TGATT i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 931779 5 - 16193990 TGATT i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1748797 5 - 21434487 TGATT i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4717667 5 - 82825804 TGATT i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 212998 5 + 2521317 TGATT i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1704091 5 - 2415367 TGATT i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142774793 5 - 204313951 TGAGT i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2173668 5 + 10068113 TGATT i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 29417 5 - 709587 tgatt i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1110217 5 - 2246441 TGATT i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1201683 5 + 48283576 TAATT i otoGar3.GL873522 I 17 I 9 s mm10.chr13 65958378 2 - 120421639 ---TC i mm10.chr13 C 0 I 3 s canFam3.chr4 37138015 5 + 88276631 TGCAT i canFam3.chr4 C 0 I 1 s dasNov3.JH562710 219415 5 - 960158 taatt i dasNov3.JH562710 C 0 C 0 e nomLeu3.chr2 4478061 148 + 163208435 I e proCoq1.NW_012152163v1 701476 43 - 940639 I a score=73301.000000 s hg38.chr5_KI270795v1_alt 17512 8 + 131892 ----------------TATTTAAA- s panTro5.chr5 5265967 8 - 181907262 ----------------TATTTAAA- i panTro5.chr5 C 0 C 0 s panPan2.chr5 5528452 8 - 183735486 ----------------TATTTAAA- i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1626176 8 + 3967317 ----------------TATTTAAA- i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4478209 8 + 163208435 ----------------TATTTAAA- i nomLeu3.chr2 I 148 C 0 s rheMac8.chr6 5710913 8 - 180051392 ----------------TATTTAAA- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5902707 8 - 181584905 ----------------TATTTAAA- i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 931784 8 - 16193990 ----------------TATTTAAA- i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1748802 8 - 21434487 ----------------TATGTAAA- i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4717672 8 - 82825804 ----------------TATTTAAA- i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 213003 8 + 2521317 ----------------TATGTAAA- i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1704096 8 - 2415367 ----------------TATTTAAA- i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142774798 8 - 204313951 ----------------TTTTTAAA- i calJac3.chr2 C 0 I 1437 s saiBol1.JH378186 2173673 8 + 10068113 ----------------TTTTTAAA- i saiBol1.JH378186 C 0 I 341 s cebCap1.NW_016107999v1 29422 8 - 709587 ----------------tttttaaa- i cebCap1.NW_016107999v1 C 0 I 348 s aotNan1.NW_018501968v1 1110222 8 - 2246441 ----------------TTTTTAAA- i aotNan1.NW_018501968v1 C 0 I 345 s otoGar3.GL873522 1201697 8 + 48283576 ----------------TAATTAAA- i otoGar3.GL873522 I 9 C 0 s mm10.chr13 65958383 8 - 120421639 ----------------TATTTAAA- i mm10.chr13 I 3 I 2972 s canFam3.chr4 37138021 7 + 88276631 ----------------TTATTAA-- i canFam3.chr4 I 1 I 9 s dasNov3.JH562710 219420 25 - 960158 tttaattCTTCCTttataatgaaaa i dasNov3.JH562710 C 0 C 0 e proCoq1.NW_012152163v1 701476 43 - 940639 I a score=36359.000000 s hg38.chr5_KI270795v1_alt 17520 3 + 131892 CTT s panTro5.chr5 5265975 3 - 181907262 CTT i panTro5.chr5 C 0 C 0 s panPan2.chr5 5528460 3 - 183735486 CTT i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1626184 3 + 3967317 CTT i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4478217 3 + 163208435 CTT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5710921 3 - 180051392 CTT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5902715 3 - 181584905 CTT i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 931792 3 - 16193990 CTT i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1748810 3 - 21434487 CTT i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4717680 3 - 82825804 CGT i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 213011 3 + 2521317 CTT i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1704104 3 - 2415367 CTT i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142776243 3 - 204313951 ctt i calJac3.chr2 I 1437 C 0 s saiBol1.JH378186 2174022 3 + 10068113 CTT i saiBol1.JH378186 I 341 C 0 s cebCap1.NW_016107999v1 29778 3 - 709587 CTT i cebCap1.NW_016107999v1 I 348 C 0 s aotNan1.NW_018501968v1 1110575 3 - 2246441 CTT i aotNan1.NW_018501968v1 I 345 C 0 s otoGar3.GL873522 1201705 3 + 48283576 TTT i otoGar3.GL873522 C 0 I 1 s canFam3.chr4 37138037 3 + 88276631 CCT i canFam3.chr4 I 9 I 18 s dasNov3.JH562710 219445 3 - 960158 att i dasNov3.JH562710 C 0 C 0 e mm10.chr13 65958391 2972 - 120421639 I e proCoq1.NW_012152163v1 701476 43 - 940639 I a score=1012836.000000 s hg38.chr5_KI270795v1_alt 17523 84 + 131892 TAAACTACAG---AGTAGAAGGAAGAAAAAAGCACCACTTGGGGTCCCACTCTCTAAATACCACCTGTTT-TAAATGTTGTGATATAT s panTro5.chr5 5265978 84 - 181907262 TAAACTACAG---AGTAGAAGGAAGAAAAAAGCATCACTTGGGGTCCCACTCTCTAAATACCACCTGTTT-TAAATGTTGTGATGTAT i panTro5.chr5 C 0 C 0 s panPan2.chr5 5528463 84 - 183735486 TAAACTACAG---AGTAGAAGGAAGAAAAAAGCATCACTTGGGGTCCCACTCTCTAAATACCACCTGTTT-TAAATGTTGTGATATAT i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1626187 84 + 3967317 TAAACTACAG---AGTAGAAGGAAGAAAAAAGCATCACTTGGGGTCCCACTCTCTAAATACCACCTGTTT-TAAATGTTGTGATATAT i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4478220 84 + 163208435 CAAACTACAG---AGTAGGAGGAAGAAAAAAGCATCACTTGGGGTCCCACTATCTAAATACCACCTGTTT-TAAATGTTGTGATATAT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5710924 85 - 180051392 TAAACTACAG---AGTAAGAGGAAGAAAAAAGCATCACTTGTGGTCCCACTATCTGAATACCACCTTTTTAAAAATGCTGTGGTATAT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5902718 85 - 181584905 TAAACTACAG---AGTAAGAGGAAGAAAAAAGCATCACTTGTGGTCCCACTATCTGAATACCACCTTTTTAAAAATGCTGTGGTATAT i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 931795 85 - 16193990 TAAACTACAG---AGTAAGAGGAAGAAAAAAGCATCACTTGTGGTCCCACTATCTGAATACCACCTTTTAAAAAATGCTGTGGTATAT i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1748813 85 - 21434487 TAAACTACAG---AGTAAGAGGAAGAAACACGCATCACTTGTGGTCCCACTATCTGAATACCACCTTTTTAAAAATGCTGTGGTATAT i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4717683 85 - 82825804 TAAACTACAG---AGTAAGAGGAAGAAAAAAGCATCACTTGTGGTCCCACTATCTGAATACCACCTTTTTAAAAATGCTGTGGTATAT i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 213014 85 + 2521317 TAAACTACAG---AGTAAGAGGAAGAAAAACGCATCACTTGTGGTCCCACTATCTGAATACCACCTTTTAAAAAATGCTGTGGTATAT i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1704107 85 - 2415367 TAAACTACAG---AGTAAGAGGAAGAAAAAAGCATCACTTGTGGTCCCACTATCTGAATACCACTTTTTAAAAAATGTTGCGGTATAT i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142776246 85 - 204313951 taaaCCACAG---AGTAGGAGGAAGAGAAAAGCATTACCTGTGGTCCTACCATCTAAAGACAACCTTTTTTTAAATATTGTGGTATAT i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2174025 85 + 10068113 Taaaccacag---agtaggaggaagaaaaaagtgtcacctgtggtcccaccatctaaagacaacctttttaaaaattttgtggtatat i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 29781 84 - 709587 TAAACCACAG---AGTAGGAGAAAGAAAAAAGCATCACCTGTGGTCCCACCATCTAAAGACAACCTTTTT-AAAATATTGTGGTATAT i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1110578 85 - 2246441 TAAATCACAG---AGTAGGAGGAAGAAGAAAGCATCACCTGTGGTGCCACCATCTAAAGACAAACTTTTTTTAAATATTGTGGTATAT i aotNan1.NW_018501968v1 C 0 I 5975 s proCoq1.NW_012152163v1 701519 83 - 940639 TAAAATACAA---AATAGGAGGAAGAAAAAAGCATCACCTGTGTTCCCACCATCTAAATACAAATTATTT--GAATGTTATAGTATAT i proCoq1.NW_012152163v1 I 43 C 0 s otoGar3.GL873522 1201709 80 + 48283576 Taaaatacag------aggagaaagagaaaagcattgcctgtggtcccaccatctaaatacagctttttt--gaatgttgtggtatat i otoGar3.GL873522 I 1 C 0 s canFam3.chr4 37138058 84 + 88276631 TAAAATATGG-AAAATAGGAGAAAGAATAAAATGTCACCTGTAGTCCCACC-TCTAAATACAGTCTCTTT--TAGTGTTGTGGTATAC i canFam3.chr4 I 18 I 1 s dasNov3.JH562710 219448 86 - 960158 ttaaatatagaaaagtagaagaaaggaaacag--tcacttgaggtcctaccatctaacaatcacctgttttttaatattggAATGTAT i dasNov3.JH562710 C 0 C 0 e mm10.chr13 65958391 2972 - 120421639 I a score=1047013.000000 s hg38.chr5_KI270795v1_alt 17607 82 + 131892 TTCTCTTTATCTTTTGCCTGTATATGAACTTG-AAAAA-------A------------TA-TTATTTAAAA-------------------TTTGAGGAATTATAAAGTT--------TTTGCTTTAAAAA s panTro5.chr5 5266062 82 - 181907262 TTCTGTTTATCTTTTGCCTGTATATGAACTTG-AAAAA-------A------------TA-TTTTTTAAAA-------------------TTTGAGGAATTATGAAGTT--------TTTGCTTTAAAAA i panTro5.chr5 C 0 C 0 s panPan2.chr5 5528547 82 - 183735486 TTCTCTTTATCTTTTGCCTGTATATGAACTTG-AAAAA-------A------------TA-TTTTTTAAAA-------------------TTTGAGGAATTATAAAGTT--------TTTGCTTTAAAAA i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1626271 82 + 3967317 TTCTCTTTATCTTTTGCCTGTATATGAACTTG-AAAAA-------A------------TA-TTTTTTAAAG-------------------TTTGAGGAATTATAAAGTT--------TTTGCTTTAAAAA i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4478304 81 + 163208435 TTCTCTTTATCTTTTGCCTGTATATGAACTTG-AAAAA-------A------------TA-TTTTTTAAAA-------------------TTTAAGGAATTATAAAGTT--------TTC-CTTTAAAAA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5711009 82 - 180051392 TTCTCTTTATCTGTTGCCTGTATATGAACTTG-AAAAA-------A------------TA-TTTTTTTAAA-------------------TTTAAGGAATTATCAAGTT--------TTTGCTTTAAAAA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5902803 82 - 181584905 TTCTCTTTATCTGTTGCCTGTATATGAACTTG-AAAAA-------A------------TA-TTTTTTTAAA-------------------TTTAAGGAATTATCAAGTT--------TTTGCTTTAAAAA i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 931880 82 - 16193990 TTCTCTTTATCTGTTGCCTGTATATGAACTTG-AAAAA-------A------------TA-TTTTTTTAAA-------------------TTTAAGGAATTATCAAGTT--------TTTGCTTTAAAAA i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1748898 82 - 21434487 TTCTCTTTATCTTTTGCCTGTATATGAACTTG-AAAAA-------A------------TA-TTTTTTTAAA-------------------TTTAAGGAATTATCAAGTT--------TTTGCTTTAAAAA i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4717768 82 - 82825804 TTCTCTTTATCTGTTGCCTGTATATGAACTTG-AAAAA-------A------------TA-TTTTTTTAAA-------------------TGTAAGTAATTATCAAGTT--------TTTGCTTTAAAAA i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 213099 82 + 2521317 TTCTCTTTATCTGTTGCCTGTATATGAACTTG-AAAAA-------A------------TA-TTTTTTTAAA-------------------TTTAAGGAATTATCAAGTT--------TTTGCTTTAAAAA i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1704192 82 - 2415367 TTCTCTTTATCTGTTGCCTGTATATGAACTTG-AAAAA-------A------------TA-TTTTTTTTAA-------------------TTTAAGGAATTAGCAAGTT--------TTTGCTTTAAAAA i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142776331 80 - 204313951 TTCTCTTTATC-TTTGCCTGTATATGAACTTG-aaaaa-------a------------ta-ttttttaaaa--------------------ttaaGAAATTACCAAGTT--------TTTGCTTTAAAAA i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2174110 82 + 10068113 ttctctttatcttttgcctatatatGAACTTG-AATAA-------A------------CA-TTTTTTAAAA-------------------TTTAAGGAATTACCAAGTT--------TTTGCTTTAAAAA i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 29865 82 - 709587 TTCTCTTTATCTTTTGCCTATATATGAACTTG-AAAAA-------A------------CA-TTTTTTAAAA-------------------TTTAAGGAATTACCAAGTT--------TTTGCTTTAAAAA i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1116638 82 - 2246441 ttctcttTATCTTTTGCCTATATATGAACTTG-AAAAA-------A------------CA-TTTTTTAAAA-------------------TTTAAGGAATTACCAAGTT--------TTTGCTTTAAAAA i aotNan1.NW_018501968v1 I 5975 C 0 s proCoq1.NW_012152163v1 701602 84 - 940639 TTTGTTTTATTTTTTGCCTGAATATGAACTTGAAAAAA-------A------------TATATTTTTTTAA-------------------TTTAAGGAATTATCAAAGT--------TTTGCTTTAAAAA i proCoq1.NW_012152163v1 C 0 C 0 s otoGar3.GL873522 1201789 83 + 48283576 tttgttttattttttacctgtgtatGAACTTGAAAAAA-------A------------CA-ATTTTTATAA-------------------TTTAAGGAATTATCAAAGT--------TTTACTTTAAAAA i otoGar3.GL873522 C 0 C 0 s canFam3.chr4 37138143 116 + 88276631 TTTTCCCTATATTTTGCCTGTATGTGAACTTA-AAAAAAATGCata------------ta-tttttttaaatgcatatttttaaaaataattttaGGAATTACCAAAATACATGTCATTTGCTTTAAAAA i canFam3.chr4 I 1 I 197 s dasNov3.JH562710 219534 93 - 960158 --------TTCTTTTTCCTATAGAT-AACtta-aatat-------atttatatatatgta-tttttaGTGA-------------------TTTAGGGAATTAGCAGAGTAGATGTGCTTTGCTTTAAAAA i dasNov3.JH562710 C 0 C 0 e mm10.chr13 65958391 2972 - 120421639 I a score=1263299.000000 s hg38.chr5_KI270795v1_alt 17689 91 + 131892 CA---------AC---AGAAGCTGGAAATAGAAAAATGGGA---GGAGAGTATTCATTTTGCAAAAGAATTTCCTCAGATTTGT---TTTTTAAT--GTTGctttattgtt s panTro5.chr5 5266144 91 - 181907262 CA---------AC---AGAAGCTGGAAATAGAAAAATGGGA---GGAGAGTATTCATTTTACAAAAGAATTTCCTCAGATTTGT---TTTTTAAT--GTTGctttattgtt i panTro5.chr5 C 0 C 0 s panPan2.chr5 5528629 91 - 183735486 CA---------AC---AGAAGCTGGAAATAGAAAAATGGGA---GGAGAGTATTCATTTTACGAAAGAATTTCCTCAGGTTTGT---TTTTTAAT--GTTGctttattgtt i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1626353 91 + 3967317 CA---------AC---AGAAGCTGGAAATAGAAAAATGGGA---GGAGAGTATTCATTTTACAAAAGAATTTCCTCAGATTTGT---TTCTTAAT--GTTGctttattgtt i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4478385 91 + 163208435 CA---------AC---AGAAGCTGGAAATAGAAAAATGGGA---GGAGAGTATTCATTTTACAAAAGAATTTCCTCAGATTTGT---TTTTTAAT--GTTGctttattgtt i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5711091 94 - 180051392 CA---------ACAACAGAAGCTGGAAATAGAAAAATGGGA---GGAGAGTATTCATTTTACAAAAGAATTTCCTCAGATTTGT---TTTTTAAT--GTTGCTGTATTGTT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5902885 94 - 181584905 CA---------ACAACAGAAGCTGGAAATAGAAAAATGGGA---GGAGAGTATTCATTTTACAAAAGAATTTCCTCAGATTTGT---TTTTTAAT--GTTGCTGTATTGTT i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 931962 94 - 16193990 CA---------ACAACAGAAGCTGGAAATAGAAAAATGGGA---GGAGAGTATTCATTTTACAAAAGAATTTCCTCAGATTTGT---TTTTTAAT--GTTGctgtattgtt i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1748980 94 - 21434487 CA---------ACAACAGAAGCTGGAAATAGAAAAATGGGA---GGAGAGTATTCATTTTACAAAAGAATTTCCTCAGATTTGT---TTTTTAAT--GTTGCTGGGTTGTT i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4717850 94 - 82825804 CA---------ACAACAGAAGCTGGAAATAGAAAAATGGGA---GGAGAGTATTCATTTTACAAAAGAATTTCCTCAGATTTGT---TTTTTAAT--GTTGCTGTATTGTT i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 213181 94 + 2521317 CA---------ACAACAGAAGCTGGAAATAGAAAAATGGGA---GGAGAGTATTCATTTTACAAAAGAATTTCCTCAGATTTGT---TTTTTAAT--GTTGCTGTATTGTT i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1704274 89 - 2415367 CA---------AC-----AAGCTGGAAATAGAAAAATGAGA---GGAGAGTATTCATTTTACAAAAGAATTTTCTCAGATTTGT---TTTTTAAT--GTTGctgtattgtt i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142776411 91 - 204313951 CA---------AC---AGAAACTGGAAATAGAAAAATGGGA---GGAGAGTATTCATTTTACAAAAGAATTTCCTCAGATTTGT---TTTTTAAT--GTTGCTTTATTGTT i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2174192 91 + 10068113 CA---------AC---AGAAGTTGGAAATAGAAAAATGGGA---GGAGAGTATTCATTTTACAAAATAATTTCCTCTGATTTGT---TTTTTAAT--GTTGCTTTATTGTT i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 29947 87 - 709587 CA---------AC---AGAAGCTGGAAATAGAAAAATGGGA---GGAGAGTATTCATTTTACAAAAGCATTTCCTCAGATTTGT---TTTTTAAT--GTTGC----TTGTT i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1116720 91 - 2246441 CA---------AC---AGAAGCTGGAAATAGAAAAATGGGA---GGAGAGTATTCATTTTACAAAAGAATTTCCTCAGATTTGT---TTTTTAAT--GTTGctttattgtt i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 701686 103 - 940639 CAATGAAACAGAC---ATAAGTTGAAAATAAAAATATGGGAGGAGGAGAGTATTCATTTTACAACAGAATTTCCTCAGCTGTAT---TTTTTAAT--GTGGctttattctt i proCoq1.NW_012152163v1 C 0 C 0 s otoGar3.GL873522 1201872 85 + 48283576 -----------AC---AGAAGTGGAAAATAAAAATTC-------CGAGAGTACTCATTTTACATAAGAATGTCCTCAGCTTTAT---TTTTTAGT--GTAGCTTTATTGTT i otoGar3.GL873522 C 0 C 0 s canFam3.chr4 37138456 95 + 88276631 CA---------AC---AGAGTTTGAAAATAGAAAAATGGGA---GGAGAGTATACATTTTACAG-AGAATTTTCTTAGATTTACTTATTTTTAATTAATTTTtttattatt i canFam3.chr4 I 197 T 40893 s dasNov3.JH562710 219627 88 - 960158 CA---------AA-GTAGAATCTGACAATAGAAAAATGGCA---GGAGAGTATTCATTTTACAAAAGAATTTCCTCAGATTTAT---TTTTTAAT--GTAGCTTTA----- i dasNov3.JH562710 C 0 C 0 e mm10.chr13 65958391 2972 - 120421639 I a score=1049645.000000 s hg38.chr5_KI270795v1_alt 17780 86 + 131892 tttggaaatctgtgacactcttcgtaaaaagattaaaactgtatagaaaacttcgaagaggaaagtaaaga-acttgaaattccact s panTro5.chr5 5266235 86 - 181907262 ttcggaaatctgtgacactcttcgtaaaaggattaaaactgtatagaaaacttcgaagagaaaagtaaaga-acttgaaattccact i panTro5.chr5 C 0 C 0 s panPan2.chr5 5528720 86 - 183735486 ttcggaaatctgtgacactcttcgtaaaaagattaaaactgtatagaaaacttcaaagaggaaagtaaaga-acttgaaattccact i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1626444 86 + 3967317 ttcggaaatctgtgacactcttcgtaaaaagattaaaactgtatagaaaacttcgaagaggaaagtaaaga-acttgaaattccact i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4478476 86 + 163208435 tttggaaatctgtgacactctgcgtaaaaagattaaaactatatagaaaacttcgaagaggaaagtaaaga-acttgaaattccact i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5711185 86 - 180051392 TTCGGAAATCTGTGACACTCTTCGTAAAAAGGTTAAAACTACATAGAAAACTTTGAAGAGGAAAGTAAAGA-ACTTGAAATTCCAGT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5902979 86 - 181584905 TTCGGAAATCTGTGACACTCTTCGTAAAAAGGTTAAAACTACATAGAAAACTTTGAAGAGGAAAGTAAAGA-ACTTGAAATTCCAGT i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 932056 86 - 16193990 ttcggaaatctgtgacactcttcgtaaaaaggttaaaactacatagaaaactttgaagaggaaagtaaaga-acttgaaattccagt i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1749074 86 - 21434487 TTCGGAAATCTGTGACACTCTTCGTAAAAAGGTTAAAACTATATAGAAAACTTTGAAGAGGAAAGGAAAGA-ACTTGAAGTTCCAGT i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4717944 86 - 82825804 TTCGGAAATCTGTGACACTCTTCGTAAAAAGGTTAAAACTATATAGAAAACTTCGAAGAGGAAAGTAAAGA-ACTTGAAATTCCAGT i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 213275 86 + 2521317 TTCGGAAATCTGTGACACTCTTCGTAAAAAGGTTAAAACTATATAGAAAACTTTGAAGAGGAAAGTAAAGA-ACTTGAAGTTCCAGT i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1704363 86 - 2415367 ttcggaaatctgtgacactcttcgtaaaaagattaaaactatatggaaaactttgaaaaggaaagtaaaga-acttgaaattccact i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142776502 86 - 204313951 TTGGGAAATCTGTGATACTCTTTGTAAAAAGATTGAAACTGTATAGAAAACCTTGAAGAAAAAAGTAAAGA-ATTTGAAATTCTACT i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2174283 86 + 10068113 TTTGGAAATCTCTGACACTCTTTGTAAAAAGATTGAAACTGTATAGAAAACCTTGAAGAATAACGTGAAGA-ATTTGAAATTCTAAT i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 30034 86 - 709587 TTTGGAAATCTGTGACACTCTTTGTAAAAAGATTGAAACTGTATAGAAAACCTTGAAGAAGAAAGTAAAGA-ATTTGAAATTCTGCT i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1116811 84 - 2246441 tttggaaatctgtgacactctttgtaaaaagattgaaac--tatagaaaaccttgaagaagaaagtaaaga-atttgaaattctact i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 701789 86 - 940639 tttggaaatatgtgatactcatagtacaagaattcaaactatgtagaaaacttccaggaagaaagtaaaaa-acttgaaattccact i proCoq1.NW_012152163v1 C 0 C 0 s otoGar3.GL873522 1201957 80 + 48283576 TTTGGAAATATGTGATATTCTTTGTGAGA-----TAAATAATATAGAAAACTTCCTAGAA-AAAGTAAAAA-ACTTCAAATTCCACT i otoGar3.GL873522 C 0 I 272 s dasNov3.JH562710 219715 80 - 960158 TTTGGAAA--TGAGTCACTCTTAGTAAAA-----CAAACTATATAGTAAACTTCAAAGAGGAAAGTAAAAATATTTGAAATTTCACT i dasNov3.JH562710 C 0 C 0 e mm10.chr13 65958391 2972 - 120421639 I e canFam3.chr4 37138551 40893 + 88276631 T a score=36289.000000 s hg38.chr5_KI270795v1_alt 17866 3 + 131892 atg s panTro5.chr5 5266321 3 - 181907262 atg i panTro5.chr5 C 0 C 0 s panPan2.chr5 5528806 3 - 183735486 atg i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1626530 3 + 3967317 atg i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4478562 3 + 163208435 atg i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5711271 3 - 180051392 ATG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5903065 3 - 181584905 ATG i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 932142 3 - 16193990 atg i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1749160 3 - 21434487 ATG i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4718030 3 - 82825804 ATG i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 213361 3 + 2521317 ATG i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1704449 3 - 2415367 atg i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142776588 3 - 204313951 ATG i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2174369 3 + 10068113 ATG i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 30120 3 - 709587 ATG i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1116895 3 - 2246441 atg i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 701875 3 - 940639 att i proCoq1.NW_012152163v1 C 0 C 0 s dasNov3.JH562710 219795 3 - 960158 ATT i dasNov3.JH562710 C 0 C 0 e mm10.chr13 65958391 2972 - 120421639 I e otoGar3.GL873522 1202037 272 + 48283576 I e canFam3.chr4 37138551 40893 + 88276631 T a score=1348909.000000 s hg38.chr5_KI270795v1_alt 17869 117 + 131892 taaagaatgctcctgtt---agtcacgttgtggtgaacattgtccagc-atccagccatgcagatCCTTCATGTAACTGCATGTCCCTGTGACGCGGAGACACTTT-CCTGCT---CAGTGACCT s panTro5.chr5 5266324 117 - 181907262 taaagaatgcccctgtt---agtcacgttgtggtgaacattgtccagc-atccagccatgcagatCCTTCATGTAACTGCATGTCCCTGTGACGCGGAGACACTTT-CCTGCT---CAGTGACCT i panTro5.chr5 C 0 C 0 s panPan2.chr5 5528809 117 - 183735486 taaagaatgcccctgtt---agtcacgttgtggtgaacattgtccagc-atccagccatgcagatCCTTCATGTAACTGCATGTCCCTGTGACGCGGAGACACTTT-CCTGCT---TAGTGACCT i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1626533 116 + 3967317 taaagaatgcccctgtt---agtcacgttgtggtgaacattgtccagc-atccagccatgcagatCCTTCATGTAACTGCATGTCGCTG-GGCGCAGAGACACTTT-CCTGCT---CAGTGACCT i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4478565 115 + 163208435 taaagaatgccc--att---agtcacgttgtggtgaacgttgtccagc-atccagccatgcagatCCTTCATGTAACTGCATGTCCCTGTGACGCAGAGACACTTT-GCTGCT---CAGTGACCT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5711274 118 - 180051392 TAAAGAATGTCTGTGTT---AGTCACGTTGTGGTGAACATTGTCCAGC-ATCCAGCCATGCAGATCCTTCATGTAATTGCGTGTCCCTGTGACTCGGTGACACTTTTCCTGCT---CAGCGACCT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5903068 118 - 181584905 TAAAGAATGTCTGTGTT---AGTCACGTTGTGGTGAACATTGTCCAGC-ATCCAGCCATGCAGATCCTTCATGTAATTGCGTGTCCCTGTGACTCGGTGACACTTTTCCTGCT---CAGCGACCT i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 932145 118 - 16193990 taaagaatgtctgtgtt---agtcacgttgtggtgaacattgtccagc-atccagccatgcagatCCTTCATGTAACTGCGTGTCCCTGTGACTCGGTGACACTTTTCCTGCT---CAGCGACCT i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1749163 117 - 21434487 TAAAGAATGTCCGTGTT---AGTCACATTGTGGTGAACGTTGTCCAGC-ATCCAGCCATGCGGATCCTT-ATGTAATTGCGTGTCCCTGTGACTCGGTGACACTTTCCCTGCT---CAGTGACCT i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4718033 118 - 82825804 TAAAGAATGTCCGTGTT---AGTCACGTTGTGGTGAACATTGTCCAGC-ATCCAGCCATGCAGATCCTTCATGTAATTGCATGTCCCTGTGATGCAGTGACACTTTTCCTGCT---CAGTGACCT i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 213364 117 + 2521317 TAAAGAATGTCCGTGTT---AGTCATGTTGTGGTGAACATTGTCCAGC-ATCCAGCCATGCGGATCCTT-ATGTAATTGCGTGTCCCTGTGACTCGGTGACACTTTCCCTGCT---CAGTGACCT i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1704452 118 - 2415367 taaagaatgcccctgtt---agtcacgttgtggtgaacattgtctagc-atccagccatgcagatCCTTCATGTAATTGCATGTCCCTGTGACGCAGTGACACTTTTCCTGCT---CAATGACCT i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142776591 117 - 204313951 TAAAGAATGCCCCTGTT---AGTCATGTTGTGGTGAGCATCGTCCAGC-ATCCAGCCATGCAGATCCTTCATGTAATTGCATGTCCCTGTGACGCAGTGACACTTA-ACTGCT---CAGTGACCT i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2174372 117 + 10068113 TAAAGAATGCCCCTGTT---AGTCATGTTGTGGTGAGCATTGTCCAGG-ATCCAGCCATGCAGATCCTTGATGTAATTGCATGTCCCTGTGATGCAGTGACATTTT-CCTGCT---CAGTGACCT i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 30123 117 - 709587 TAAAGAATGCTCCTGTT---AGTCATGTTGTGGTGAGCATTGTCCAGC-ATCCAGCCATGCAGATCCTTCATGTAATTGCATGTCCCTGTGACGCAGTGACACTTT-CCTGCT---CAGTGACCT i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1116898 117 - 2246441 taaagaatgcccctgtt---agtcatgttgtggtgagcattgtccagc-atccagccatgcagatCCTTCATGTAATTGCATGTCCCTGTGACACAGTGACACTTT-GCTGCT---CAGTGACCT i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 701878 114 - 940639 taaagaatgccttggt------taacattgcggtgagcaccgcccagccatcCAGCCACGCAGGTCCTTTATGTAAGCCCAGGGTCCTATGACACAGTGATACTCT-CCTGCT----GGGGACCT i proCoq1.NW_012152163v1 C 0 C 0 s otoGar3.GL873522 1202309 118 + 48283576 TAAAGAATGCCTCTGTT---GATAACATTGCAGTGAGCACTGTGTAGCTATCCAGCCATGCAAGTGCCTTATGTAAGCCCATGGTACCACAATGCAGCAATAGGCT-CCTACT---CAGGGATTT i otoGar3.GL873522 I 272 C 0 s dasNov3.JH562710 219798 122 - 960158 TGGAGAATGCTGTTGTTAAGAATAACATTGCAGTGAGCATGGTTCC-C-ATGCAGACAAGCAGATCCTTTATGTCATCCTTTGTTCATGTGAAGCAGGAGTTCTCT-CCTGCTGTTCTGTGACCT i dasNov3.JH562710 C 0 C 0 e mm10.chr13 65958391 2972 - 120421639 I e canFam3.chr4 37138551 40893 + 88276631 T a score=64587.000000 s hg38.chr5_KI270795v1_alt 17986 4 + 131892 Gctc s panTro5.chr5 5266441 4 - 181907262 Gctc i panTro5.chr5 C 0 C 0 s panPan2.chr5 5528926 4 - 183735486 GCTC i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1626649 4 + 3967317 GCTC i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4478680 4 + 163208435 GCTC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5711392 4 - 180051392 Gctc i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5903186 4 - 181584905 Gctc i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 932263 4 - 16193990 Gctc i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1749280 4 - 21434487 Gctc i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4718151 4 - 82825804 Gctc i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 213481 4 + 2521317 Gctc i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1704570 4 - 2415367 Gctc i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142776708 4 - 204313951 GCTC i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2174489 4 + 10068113 Gctc i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 30240 4 - 709587 Gctc i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1117015 4 - 2246441 Gctc i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 701992 4 - 940639 actc i proCoq1.NW_012152163v1 C 0 C 0 s otoGar3.GL873522 1202427 4 + 48283576 GCTT i otoGar3.GL873522 C 0 C 0 s canFam3.chr4 37097658 4 + 88276631 gttc i canFam3.chr4 T 40893 C 0 s dasNov3.JH562710 219920 4 - 960158 GCTT i dasNov3.JH562710 C 0 I 321 e mm10.chr13 65958391 2972 - 120421639 I a score=628904.000000 s hg38.chr5_KI270795v1_alt 17990 54 + 131892 ttgagttaacccacctgtgctcagaaccggctctgtcctccgctggcttgtggg s panTro5.chr5 5266445 54 - 181907262 ttgagttaacccacctgtgctcagaacctgctctgtcctccgctggcttgtggg i panTro5.chr5 C 0 C 0 s panPan2.chr5 5528930 53 - 183735486 TTGAGTT-ACCCACCTGTGCTCAGAACCTGCTCTGTCCTCCGCTGGCTTGTGGG i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1626653 54 + 3967317 TTGAGTTAACCCACCTATGCTCAGAACCTGCTCTGTCCTCCGCTGGCTTGTGGG i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4478684 54 + 163208435 ATGAGTTAACCCACCTGTGCTCAGAACCTGTTCTGTCCCCCGCTGGCTTGTGGG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5711396 54 - 180051392 ttgagttaacccacctgtgctcagagcctgctctgccccctgctggcttgtggg i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5903190 54 - 181584905 ttgagttaacccacctgtgctcagagcctgctctgccccctgctggcttgtggg i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 932267 54 - 16193990 ttgagttaacccacctgtgctcagagcctgctctgccccctgctggcttgtggg i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1749284 54 - 21434487 ttgagttaacccacctgtgctcagagcctgctctgccccctgctggcttgtggg i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4718155 54 - 82825804 ttgagtcaacccacctgtgctcagagcccgctctgccccctgctggcttgtggg i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 213485 54 + 2521317 ttgagttaacccacctgtgctcagagcctgctctgccccctgctggcttgtggg i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1704574 54 - 2415367 ttgagttaacccacctgtgctcagagcctgctctgccccctgctggcttgtggg i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142776712 54 - 204313951 TTAAGTTGACCCATCTGCACttcgatcctgctctgccccctgctggcttgtggg i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2174493 54 + 10068113 ttgagttaacccacctgcacttcgatcctgctttgccccctgctggcttgtggg i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 30244 54 - 709587 ttgagttaacccacctgcacttcgatcctgctctgtcccctgctggcttgtggg i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1117019 54 - 2246441 ttgagttaacccacctgcacttcgatcctgctctgccccctgctggcttgtggg i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 701996 54 - 940639 ttaagttaacctgcctgtgttcagatcctgctgtgccacctactgacttgtgac i proCoq1.NW_012152163v1 C 0 C 0 s otoGar3.GL873522 1202431 29 + 48283576 TTAAGTTAA-------------------------ACCACCCACTGACCTGtagc i otoGar3.GL873522 C 0 C 0 s canFam3.chr4 37097662 54 + 88276631 ttaagttaactggcctacattcaaatcttgttctgtcacctactggcttatgac i canFam3.chr4 C 0 C 0 e mm10.chr13 65958391 2972 - 120421639 I e dasNov3.JH562710 219924 321 - 960158 I a score=756733.000000 s hg38.chr5_KI270795v1_alt 18044 59 + 131892 --------------------------------------------ctctctgtgcctgggggttct---ctgtaaaatgaggtaa-tagttgtatct-atctc-atggga s panTro5.chr5 5266499 59 - 181907262 --------------------------------------------ctctctgtgcctgggggttct---ctgtaaaatgaggtaa-tagttgtatct-atctc-atggga i panTro5.chr5 C 0 C 0 s panPan2.chr5 5528983 59 - 183735486 --------------------------------------------ctctctgtgcctgggggttct---ctgtaaaatgaggtaa-tagttgtatct-atctc-atggga i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1626707 59 + 3967317 --------------------------------------------ctctctgtgcctgggggttct---ctgtaaaatgaggtaa-tagttgtatct-atctc-atggga i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4478738 59 + 163208435 --------------------------------------------ctctctgtgcctgggggttct---ctgtaaaatgagttaa-tagttgtatct-atctc-atggga i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5711450 59 - 180051392 --------------------------------------------ctctctgtgcctgggggttct---ctgtaaaatgaggtag-tagttgtatct-atctt-atggga i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5903244 59 - 181584905 --------------------------------------------ctctctgtgcctgggggttct---ctgtaaaatgaggtag-tagttgtatct-atctt-atggga i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 932321 59 - 16193990 --------------------------------------------ctctctgtgcctgggggttct---ctgtaaaatgaggtag-tagttgtatct-atctt-atggga i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1749338 59 - 21434487 --------------------------------------------ctctctgtgcctgggggttct---ctgtaaaatgaggtaa-tagttgtatct-atctt-atggga i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4718209 59 - 82825804 --------------------------------------------ctctctgtggctgggggttct---ctgtaaaatgaggtaa-tagttgtatct-atctt-atggga i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 213539 59 + 2521317 --------------------------------------------ctctctgtgcctgggggttct---ctgtaaaatgaggtaa-tagttgtatct-atctt-atggga i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1704628 59 - 2415367 --------------------------------------------ctctctgtgcctgggagttct---ctgtaaaatgaggtaa-tagttgtgtct-atctt-gtggga i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142776766 56 - 204313951 --------------------------------------------ctcactgtgcctggggattct---ctgtaaaatgaggtaa-----tgaatctaatctc-atggga i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2174547 59 + 10068113 --------------------------------------------ctctctgtgccagggggttct---ctgtaaaatgaggtaa-tgattgaatct-atctc-atggga i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 30298 59 - 709587 --------------------------------------------ctgtctgtgcccaggggttct---ctgtaaaatgaggtaa-tgattgaatct-atctc-atggga i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1117073 59 - 2246441 --------------------------------------------ctctctgtgcctgggggtgct---ctgtaaaatgaggtaa-tgattgaatct-atctc-atggga i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 702050 63 - 940639 --------------------------------------------ctctctgtgcctcagggttcttccctgtaaaatgaggtaatttattttacct-atctc-acagga i proCoq1.NW_012152163v1 C 0 C 0 s otoGar3.GL873522 1202460 61 + 48283576 --------------------------------------------ttctctgtgcctcagtgttct---ctataaaatgaggtaatttatctttcct-gtctctttagga i otoGar3.GL873522 C 0 C 0 s canFam3.chr4 37097716 58 + 88276631 --------------------------------------------ctctctgtacctcagtggtct---cagtaaaatgcagtaa-t-gttgtatct-atctt-ataggg i canFam3.chr4 C 0 I 53010 s dasNov3.JH562710 220245 102 - 960158 ctgcctgtgttcagggcctgccctgctaccagctgacttataacctctctatgcctaagtgtcct---ctaaaatgtg-ggtaa-tggttgtacct-atctc-ataggg i dasNov3.JH562710 I 321 C 0 e mm10.chr13 65958391 2972 - 120421639 I a score=597807.000000 s hg38.chr5_KI270795v1_alt 18103 41 + 131892 ttagtaggtggattaaaccagttaatacagg--taagtactta s panTro5.chr5 5266558 41 - 181907262 ttagtaggtggattaaaccagttaatacagg--taagtactta i panTro5.chr5 C 0 C 0 s panPan2.chr5 5529042 41 - 183735486 ttagtaggtggattaaaccagttaatacagg--taagtactta i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1626766 41 + 3967317 ttagtaggtggattaaaccagttaatacagg--taagtactta i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4478797 41 + 163208435 ttagtaggtggattaaacgagttaatacagg--taagtactta i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5711509 41 - 180051392 ttagtaggtgaattaaacgagttaatacagg--taagtactta i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5903303 41 - 181584905 ttagtaggtgaattaaacgagttaatacagg--taagtactta i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 932380 41 - 16193990 ttagtaggtgaattaaacgagttaatacagg--taagtactta i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1749397 41 - 21434487 ttagtaggtggattaaacgagttaatacagg--taagtactta i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4718268 41 - 82825804 ttagtaggtggattaaacgagttaatacagg--taagtactta i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 213598 41 + 2521317 ttagtaggtggattaaacgagttaatacagg--taagtactta i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1704687 41 - 2415367 ttagtaggtggattaaacaagttaatacagg--taagtactta i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142776822 41 - 204313951 ttagtaggtggattaaacaaattaatatagg--taagtactta i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2174606 41 + 10068113 ttagtaggtggattaaacaaattaacatagg--taagtactta i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 30357 41 - 709587 ttagtaggtggattaaacaaattaacatagg--taagtgctta i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1117132 41 - 2246441 ttagtaggtggattaaacaaattaacatagg--taagtactta i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 702113 41 - 940639 ttattaaatggattaaatgagttaatatagg--taattactta i proCoq1.NW_012152163v1 C 0 I 13 s otoGar3.GL873522 1202521 43 + 48283576 taattaaatggattaaatgagttaatataggtataagtactta i otoGar3.GL873522 C 0 C 0 s canFam3.chr4 37150784 41 + 88276631 ttaaaaaatggattaaatgatttaatgtagg--caagtactaa i canFam3.chr4 I 53010 C 0 s dasNov3.JH562710 220347 41 - 960158 ttattaagtggattaaatgaattaatgtagg--taagtgctta i dasNov3.JH562710 C 0 C 0 e mm10.chr13 65958391 2972 - 120421639 I a score=170285.000000 s hg38.chr5_KI270795v1_alt 18144 19 + 131892 ATGAATGT--GTCCTTCGTTT s panTro5.chr5 5266599 19 - 181907262 ATGAATGT--ATCCTTCGTTT i panTro5.chr5 C 0 C 0 s panPan2.chr5 5529083 19 - 183735486 ATGAATGT--ATCCTTCGTTT i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1626807 19 + 3967317 ATGAATGT--GTCCTTCGTTT i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4478838 19 + 163208435 ATGAATGT--GTCCTTCGTTT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5711550 19 - 180051392 ATGAATGT--GTCCTTCGTTA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5903344 19 - 181584905 ATGAATGT--GTCCTTCGTTA i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 932421 19 - 16193990 ATGAATGT--GTCCTTCGTTA i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1749438 19 - 21434487 ATGAATGT--GTCCTTCGTTA i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4718309 19 - 82825804 ATGAATGT--GTCCTTCGCTA i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 213639 19 + 2521317 ATGAATGT--GTCCTTCGTTA i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1704728 19 - 2415367 ATGAATGT--GTCCTTCGTTA i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142776863 19 - 204313951 ATGGATGT--GTCCTTTATTT i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2174647 19 + 10068113 ATGGATAT--GTCCTTAATTA i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 30398 19 - 709587 ATGGATGT--GTCCTTTATTA i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1117173 19 - 2246441 ATGGATGT--GTCCTTTATTA i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1202564 13 + 48283576 --gaatat--gccCAAA---- i otoGar3.GL873522 C 0 C 0 s canFam3.chr4 37150825 20 + 88276631 atgaatat-ggtttcttatta i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 220388 17 - 960158 atgaacGAAGGCTCTTA---- i dasNov3.JH562710 C 0 C 0 e mm10.chr13 65958391 2972 - 120421639 I e proCoq1.NW_012152163v1 702154 13 - 940639 I a score=4025806.000000 s hg38.chr5_KI270795v1_alt 18163 227 + 131892 TGAACGTATTGATTGGTTTCTCTCTATTGTTTTCTATAGGGGACAAACTATGGGAGGTACAGTGTGAGTCTCCGACCTTCACAGTGGCATGGCACCCCAAAAGGCCTCTGCTGGCATTTGCCTGTGATGACAAAGACGGCAAATATGACAGCAGCCGGGAAGCCGGAACTGTGAAGCTGTTTGGGCTTCCTAATGATTCTTGAGAGG------AG-----GTTGT-AGGGAGAGGAGGC s panTro5.chr5 5266618 227 - 181907262 TGAACGTATTGATTGGTTTCTCTCTATTGTTTTCTATAGGGGACAAACTATGGGAGGTACAGTGTGAGTCTCCGACCTTCACAGTGGCGTGGCACCCCAAAAGGCCTCTGCTGGCATTTGCCTGTGATGACAAAGACGGCAAATATGACAGCAGCCGGGAAGCCGGAACTGTGAAGCTGTTTGGGCTTCCTAATGATTCTTGAGAGG------AG-----GTTGT-AGGGAGAGGAGGC i panTro5.chr5 C 0 C 0 s panPan2.chr5 5529102 227 - 183735486 TGAACGTATTGATTGGTTTCTCTCTATTGTTTTCTATAGGGGACAAACTATGGGAGGTACAGTGTGAGTCTCCGACCTTCACAGTGGCGTGGCACCCCAAAAGGCCTCTGCTGGCATTTGCCTGTGATGACAAAGACGGCAAATATGACAGCAGCCGGGAAGCCGGAACTGTGAAGCTGTTTGGGCTTCCTAATGATTCTTGAGAGG------AG-----GTTGT-AGGGAGAGGAGGC i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1626826 227 + 3967317 TGAACGTATTGATTGGTTTCTCTCTATTGTTTTCTATAGGGGACAAACTATGGGAGGTACAGTGTGAGTCTCCGACCTTCACAGTGGCGTGGCACCCCAAAAGGCCTCTGCTGGCATTTGCCTGTGATGACAAAGACGGCAAATATGACAGCAGCCGGGAAGCCGGAACTGTGAAGCTGTTTGGGCTTCCTAATGATTCTTGAGAGG------AG-----GTTGT-AGGGAGAGGAGGC i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4478857 227 + 163208435 TGAACGTATTGATTGGTTTCTCTCTATTGTTTTCTATAGGGGACAAACTATGGGAGGTACAGTGTGAGTCTCCGACCTTCACAGTGGCGTGGCACCCCAAAAGGCCTCTGCTGGCATTTGCCTGTGATGACAAAGACGGCAAATATGACAGCAGCCGGGAGGCCGGAACTGTGAAGCTGTTTGGGCTTCCTAATGATTCTTGAGAGG------AG-----GTTGT-AGGGAGAGGAGGC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5711569 227 - 180051392 TGAACGTATTGATTGGTTTCTCTCTATTGTTTTCTATAGGGGACAAACTATGGGAGGTACAGTGTGAGTCTCCGACCTTCACAGTGGCGTGGCACCCCAAAAGGCCTCTGCTGGCATTTGCCTGTGATGACAAAGACGGCAAATATGACAGCAGCCGGGAAGCCGGAACTGTGAAGCTGTTTGGGCTTCCTAATGATTCTTGAGAGG------GG-----ATTGT-AGGGAGAGGAGGC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5903363 227 - 181584905 TGAACGTATTGATTGGTTTCTCTCTATTGTTTTCTATAGGGGACAAACTATGGGAGGTACAGTGTGAGTCTCCGACCTTCACAGTGGCGTGGCACCCCAAAAGGCCTCTGCTGGCATTTGCCTGTGATGACAAAGACGGCAAATATGACAGCAGCCGGGAAGCCGGAACTGTGAAGCTGTTTGGGCTTCCTAATGATTCTTGAGAGG------GG-----ATTGT-AGGGAGAGGAGGC i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 932440 227 - 16193990 TGAACGTATTGATTGGTTTCTCTCTATTGTTTTCTATAGGGGACAAACTATGGGAGGTACAGTGTGAGTCTCCGACCTTCACAGTGGCGTGGCACCCCAAAAGGCCTCTGCTGGCATTTGCCTGTGATGACAAAGACGGCAAATATGACAGCAGCCGGGAAGCCGGAACTGTGAAGCTGTTTGGGCTTCCTAATGATTCTTGAGAGG------GG-----ATTGT-AGGGAGAGGAGGC i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1749457 227 - 21434487 TGAACGTATTGATTGGTTTCTCTCTATTGTTTTCTATAGGGGACAAACTATGGGAGGTACAGTGTGAGTCTCCGACCTTCACAGTGGCGTGGCACCCCAAAAGGCCTCTGCTGGCATTTGCCTGTGATGACAAAGACGGCAAATATGACAGCAGCCGGGAAGCCGGAACTGTGAAGCTGTTTGGGCTTCCTAATGATTCTTGAGAGG------GG-----ATTAT-AGGGAGAGGAGGC i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4718328 227 - 82825804 TGAACGTATTGATTGGTTTCTCTCTATTGTTTTCTATAGGGGACAAACTATGGGAGGTACAGTGTGAGTCTCCGACCTTCACAGTGGCGTGGCACCCCAAAAGGCCTCTGCTGGCATTTGCCTGTGATGACAAAGACGGCAAATATGACAGCAGCCGGGAAGCCGGAACTGTGAAGCTCTTTGGGCTTCCTAATGATTCTTGAGAGG------AG-----ATTAT-AGGGAGAGGAGGC i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 213658 227 + 2521317 TGAACGTATTGATTGGTTTCTCTCTATTGTTTTCTATAGGGGACAAACTATGGGAGGTACAGTGTGAGTCTCCGACCTTCACAGTGGCGTGGCACCCCAAAAGGCCTCTGCTGGCATTTGCCTGTGATGACAAAGACGGCAAATATGACAGCAGCCGGGAAGCCGGAACTGTGAAGCTGTTTGGGCTTCCTAATGATTCTTGAGAGG------GG-----ATTAT-AGGGAGAGGAGGC i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1704747 227 - 2415367 TGAACGTATTGATTGGTTTCTCTCTATTGTTTTCTATAGGGGACAAACTATGGGAGGTACAGTGTGAGTCTCCGACCTTCACAGTGGCGTGGCACCCCAAAAGGCCTCTGCTGGCATTTGCCTGTGATGACAAAGACGGCAAATATGACAGCAGCCGGGAAGCCGGAACTGTGAAGCTGTTTGGGCTTCCTAATGATTCTTGAGAGG------AG-----ATTAT-AGGGAGAGGAGGC i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142776882 226 - 204313951 TGAATGTATTGATTGTTTTTTCTCTGTTGTTTTCTATAGGGGACAAGCTATGGGAGGTACAGTGTGAGTCTCCGACCTTCACCGTGGCGTGGCACCCCAAAAGGCCTCTGCTGGCATTTGCCTGTGATGACAAAGATGGCAAATATGACAGTAGCCGGGAAGCTGGAACTGTGAAGCTGTTTGGGCTTCCTAATGATTCTTGAGAGG------AG-----GTTGT-AGGG-GAGGAGGC i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2174666 227 + 10068113 TGAACGTATTCATTGGTTTTTCTCTATTGTTTTCTATAGGGGACAAGCTATGGGAGGTACAGTGTGAGTCTCCGACCTTCACCGTGGCCTGGCACCCCAAAAGGCCTCTGCTGGCATTTGCCTGTGATGACAAAGATGGCAAATATGACAGTAGTCGGGAAGCCGGAACTGTGAAGCTGTTTGGGCTTCCTAATGATTCTTGAGAGG------AG-----GTTGT-AGGGAGAGGAGGG i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 30417 227 - 709587 TGAACGTATTGATTGGTTTTTCTCTATTGTTTTCTATAGGGGACAAGCTATGGGAGGTACAGTGTGAGTCTCCGACCTTCACCGTGGCGTGGCACCCCAAAAGGCCTCTGCTGGCATTTGCCTGTGATGACAAAGACGGGAAATATGACAGTAGCCGGGAAGCCGGAACTGTGAAGCTGTTTGGGCTTCCTAATGACTCTTGAGAGG------AG-----GTTGT-AGGGAGAGGAGGC i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1117192 227 - 2246441 TGAACATATTGATTGGTTTTTCTCTATTGTTTTCTATAGGGGACAAGCTATGGGAGGTACAGTGTGAGTCTCCGACCTTCACCGTGGCGTGGCACCCCAAAAGGCCTCTCCTGGCATTTGCCTGTGATGACAAAGACGGCAAATATGATAGTAGCCGGGAAGCCGGAACTGTGAAGCTGTTTGGGCTTCCTAATGATTCTTGAGAGG------AG-----GTTGT-AGGGAGAGGAGGC i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 702167 227 - 940639 TTAAGGTGTTGATTTGTTTCTCTGTATTGACTTCTGTAGGAGACAAGCTATGGGAGGTGCAGTGTGAGTCTCCAACCTTCACTGTGGCTTGGCACCCCAAAAGGCCTCTGCTGGCATTTGCTTGTGATGACAAAGATGGCAAATATGACAGCAGTCGGGAAGCTGGAACTGTGAAGCTGTTTGGACTTCCTAATGATTCCTGAGATG------AG-----GTTGT-AGGGAGAGGAGGC i proCoq1.NW_012152163v1 I 13 C 0 s otoGar3.GL873522 1202577 227 + 48283576 TTAAGGTGTTGAGTTGTTTCTCTATGTTGACTTTTATAGGAGACAAGCTATGGGAGGTGCAGTGTGAGTCTCCGACCTTCACCGTGGCTTGGCACCCCAAAAGGCCACTGCTGGCATTTGCCTGTGATGACAAAGATGGCAAATATGACAGCAGTCGGGAAGCCGGAACTGTGAAGCTGTTTGGACTTCCTAATGATTCCTGAGATG------AG-----GTCGT-AGGGAGAGGAGGC i otoGar3.GL873522 C 0 C 0 s mm10.chr13 65961363 233 - 120421639 TGAATGTGTTACTTAGTAACATTCTGTTCTTTTCTGTAGGAGACAAGCTATGGGAGGTGCAGTGTGAGTCCCCGACTTTCACTGTGGCTTGGCACCCCAAGAGGCCTCTGCTGGCTTTTGCCTGTGATGACAAAGATGGCAAATACGACAGCAGTCGGGAGGCTGGAACTGTGAAGCTGTTTGGACTTCCCAATGACTCCTGAGAGGGCCGACAG-----CGAGA-GGAGAGAGGAGGC i mm10.chr13 I 2972 I 2256 s canFam3.chr4 37150845 228 + 88276631 ttAATGTATTGATTGGTTTCCCTATATTGATTTTTATAGGAGACAAGCTATGGGAGGTGCAGTGTGAGTCTCCAACTTTCACCGTGGCTTGGCACCCCAAGAGGCCTCTGCTGGCGTTTGCCTGTGATGACAAAGATGGCAAATATGACAGCAGTCGGGAAGCAGGAACTGTGAAGCTGTTTGGGCTTCCTAATGACTCCTGATAGG------AG-----GACCTCAGGGAGAGGGGGC i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 220405 232 - 960158 TTAATATATTGATTGGTTTCTCTACATTGATTTCTGTAGGAGACAAGCTGTGGGAGGTGCAGTGTGAGTCCCCGACCTTCACCGTGGCTTGGCACCCCAAACGGCCACTGCTGGCATTTGCCTGTGATGACAAAGATGGCAAATATGACAGCAGTCGGGAAGCAGGAACTGTGAAGCTTTTTGGGCTTCCTAATGATTCCTGATAGG------AGAACCTGGTAT-AGGATGAGGCGGC i dasNov3.JH562710 C 0 C 0 a score=1592584.000000 s hg38.chr5_KI270795v1_alt 18390 112 + 131892 CCCGGCAGAGGTCTTCCTTCATG---TGGTTAGTTTGGT-----CTGTTCTCTCGGAGTTGGTGGGCACCCTAAATATTTGTAAGTTGGTATAAATTGTAAACGTCTCTGGTCAGGCTGC s panTro5.chr5 5266845 112 - 181907262 CCCGGCAGAGGTCTTCCTTCATG---TGGTTAGTTTGGT-----CTGTTCTCTCTGAGTTGGTGGGCACCCTAAATATTTGTAAGTTGGTATAAATTGTGAACGTCTCTGGTCAGGCTGC i panTro5.chr5 C 0 C 0 s panPan2.chr5 5529329 112 - 183735486 CCCGGCAGAGGTCTTCCTTCATG---TGGTTAGTTTGGT-----CTGTTCTCTCTGAGTTGGTGGGCACCCTAAATATTTGTAAGTTGGTATAAATTGTAAACGTCTCTGGTCAGGCTGC i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1627053 112 + 3967317 CCCGGCGGAGGTCTTCCTTCATG---TGGTTAGTTTGGT-----CTGTTCTCTCGGAGTTGGTGGGCACCCTAAATATTTGTAAGTTGGTATAAATTGTAAACGTCTCTGGTCAGGCTGC i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4479084 111 + 163208435 CCCGGCGGAGGTTTTCCTTCATG---TGGTTAGTTTGGT-----CTGTTCTCTCGGAGTTAGTGGGCACCCTAAATATTTGTAAGTTGGTATAAATTGTAAACGTCTC-GGTCAGGCCGC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5711796 112 - 180051392 CCTGGCAGAGGTCTTCCTTCATG---TGGTTAGTTTGGT-----CTGTTCTCTTGGAGTTGGTGGGCACCCTAAATATTTGTAAATTGGTACAAATTGTAAATGTCTATGGTCAGGCTGC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5903590 112 - 181584905 CCTGGCAGAGGTCTTCCTTCATG---TGGTTAGTTTGGT-----CTGTTCTCTTGGAGTTGGTGGGCACCCTAAATATTTGTAAATTGGTACAAATTGTAAATGTCTATGGTCAGGCTGC i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 932667 112 - 16193990 CCTGGCAGAAGTCTTCCTTCATG---TGGTTAGTTTGGT-----CTGTTCTCTTGGAGTTGGTGGGCACCCTAAATATTTGTAAATTGGTATGAATTGTAAATGTCTATGGTCAGGCTGC i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1749684 112 - 21434487 CCTGGCAGAGGTCTTCCTTCATA---TGGTTAGTTTGGT-----CTGTTCTCTTGGAGTTGGTGGGCACCCTAAATATTTGTAAATTGGTATAAATTGTAAATGTGTATGGTCAGGCTGC i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4718555 112 - 82825804 CCTGGCAGAGGTCTTCCTTCATG---TGGTTAGTTTGGT-----TTGTTCTCTTGGAGTTGGTGGGCACCCTAAATATTTGTAAATTGGTATAAATTGTAAATGTCTATGGTCAGGCTGC i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 213885 112 + 2521317 CCTGGCAGAGGTCTTCCTTCATG---TGGTTAGTTTGGT-----CTGTTCTCTTGGAGTTGGTGGGCACCCTAAATATTTGTAAATTGGTATAAATTGTAAATGTCTATGGTCAGGCTGC i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1704974 112 - 2415367 CCTGGCAGAGGTCTTCCTTCATG---TGGTTAGTTTGGT-----CTGTTCTCTTGGAGTTGGTGGGCACCCTAAATATTTGTAAATTGGTATAAATTGTAAACATCTATGGTCAGGCTGC i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142777108 112 - 204313951 CCTGGCAGAGGTCTTCCTTTATG---GGGTTAGTTTGGT-----CTGTTCTTTTGGAGTTGGTGGGCACCCTAAATATTTGTAAATTGGTATAAATTGTAAATGTCTCTGGTCAGGCTGC i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2174893 112 + 10068113 CCTGGCAGAGGTCTTCCTTTACG---GGGTTAGTTTGGT-----CTGTTCTCTTGGTGTTGGTGGGCACCCTAAATATTTGTAAATTGGTATAAATCGTAAACGTCTCTGGTCAGGCTGC i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 30644 112 - 709587 CCTGGCAGAGGTCTTCCTTTATG---GGGTTAGTTTGGT-----CTGTTCTCTTGGACTTGGTGGGCACCCTAAATATTTGTAAATTGGTATAAATTGTAAACGTCTCTGGTCAGGCTGC i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1117419 112 - 2246441 CCTGGCAGAGGTCTTCCTTTATG---GGGTTGGTTTGAT-----CTGTTCTCTTGGGGTTGGTGGGCACCCTAAATATTTGTAAATTGGTATAAATTGTAAACGCCTCTGGTCAGGCTGC i aotNan1.NW_018501968v1 C 0 I 3848 s proCoq1.NW_012152163v1 702394 112 - 940639 CCTGGCAGAGGCCCTTCTTTGTG---CAGTTAGTTTGGT-----CTGTTCCCTTGGAGTTGGTGGGTACCCTAAACATGCGTAAATTGGTATAAATTATAAAAGTCTTCTGTCAGGCTGC i proCoq1.NW_012152163v1 C 0 C 0 s otoGar3.GL873522 1202804 110 + 48283576 CCTGGCAGAGGGCTTTCTTTGTC---CATTTAGTTTAGT-----CTGTTCTCTTATAGTTGGAGGGCACCCTAAACAT--GTAAGTTGATATAGATTGTAACAGTCTTTTGTTAGCCTGT i otoGar3.GL873522 C 0 C 0 s canFam3.chr4 37151073 110 + 88276631 CCTGGCAGAGGCCTTCCTTTGTG---TA-TTAGTTTGGT-----CTGTTCTCTTGGAGTTGGTGGGCACCTAAGGTATTTGTAAATTGGTATAAATTATACAAGTCTTT-GTTAGTTTGC i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 220637 117 - 960158 CATGGCAGAGGCCTTCCTTTGTGGTATGGTTAGTTGTGTATTAGTTTTTCCCTTTGTATTGGTGGGCACCC-AAGTATTTGTAAACTGGTATAAGTTATAA--GTCCTTTCTCGGGGTGC i dasNov3.JH562710 C 0 C 0 e mm10.chr13 65961596 2256 - 120421639 I a score=58029.000000 s hg38.chr5_KI270795v1_alt 18502 9 + 131892 GCATTTC-GT s panTro5.chr5 5266957 9 - 181907262 GCATTTC-GT i panTro5.chr5 C 0 C 0 s panPan2.chr5 5529441 9 - 183735486 GCATTTC-GT i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1627165 9 + 3967317 GCATTTC-GT i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4479195 9 + 163208435 CCATTTT-GT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5711908 10 - 180051392 CCATTCCAGT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5903702 10 - 181584905 CCATTCCAGT i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 932779 10 - 16193990 CCATTCCAGT i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1749796 10 - 21434487 CCATTCCAGT i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4718667 10 - 82825804 CCATTCCAGT i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 213997 10 + 2521317 CCATTCCAGT i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1705086 10 - 2415367 CCATTCCAGT i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142777220 10 - 204313951 CCACTCCAGT i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2175005 10 + 10068113 GCACTCCAGT i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 30756 10 - 709587 CCACTCCAGT i cebCap1.NW_016107999v1 C 0 C 0 s proCoq1.NW_012152163v1 702506 10 - 940639 CCATTCCAAT i proCoq1.NW_012152163v1 C 0 C 0 s otoGar3.GL873522 1202914 10 + 48283576 CCATTCTAAC i otoGar3.GL873522 C 0 C 0 s canFam3.chr4 37151183 9 + 88276631 CTATTCTAG- i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 220754 9 - 960158 ACATTCCAA- i dasNov3.JH562710 C 0 C 0 e mm10.chr13 65961596 2256 - 120421639 I e aotNan1.NW_018501968v1 1117531 3848 - 2246441 I a score=2247399.000000 s hg38.chr5_KI270795v1_alt 18511 195 + 131892 TCTTTTGCTT--TGTCTGTGTATTAG----CTCTTTCCATTCTTTGC-CC-----------CCAGCATGAG---------------TTAACTCGCGT-----------------------------------GGACTCTG-CAGTG------------------------------------------------------------------------------------------------------------------CGAGTAGTGACCCCAGCATACCTTGTC-CTCTGGACCTCCTGTCTTCTCTGCTTC-TGGGTGCATGGTAGACTTTGTGGCATTTGATACAACTTGGACAATACCTAGTTTG-----------GA-GGGAGGG s panTro5.chr5 5266966 194 - 181907262 TCTTTTGCTT--TGTCTGTGTATTAG----CTCTTTCCATTCTTTGC-CC-----------CCAGCATGAG---------------TTAACTCGTGT-----------------------------------GGACTCTG-CAGTG------------------------------------------------------------------------------------------------------------------CGAGTAGTGACCCCAGCATACCTTGTC-CTCTGGACCTCCTGTCTTCTCTGCTTC--GGGTGCATGGTAGACTTTGTGGCATTTGATACAACTTGGACAATACCTAGTTTG-----------GA-GGGAGGG i panTro5.chr5 C 0 C 0 s panPan2.chr5 5529450 195 - 183735486 TCTTTTGCTT--TGTCTGTGTATTAG----CTCTTTCCATTCTTTGC-CC-----------CCAGCATGAG---------------TTAACTCGTGT-----------------------------------GGACTCTG-CAGTG------------------------------------------------------------------------------------------------------------------CGAGTAGTGACCCCAGCATACCTTGTC-CTCTGGACCTCCTGTCTTCTCTGCTTC-TGGGTGCATGGTAGACTTTGTGGCATTTGATACAACTTGGACAATACCTAGTTTG-----------GA-GGGAGGG i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1627174 195 + 3967317 TCTTTTGCTT--TGTCTGTGTATTAG----CTCTTTCCATTCTTTGC-CC-----------CCAGCATGAG---------------TTAACTCGTGT-----------------------------------GGACTCTG-CAGTG------------------------------------------------------------------------------------------------------------------CGAGTAGTGACCCCAGCATACCTTGTC-CTCTGGACCTCCTGTCTTCTCTGCTTC-TGGGTGCATGGTAGACTTTGTGGCATTTGATACAACTTGGACAATACCTAGTTTG-----------GA-GGGAGGG i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4479204 196 + 163208435 TCTTTTGCTT--TGTCTGTGTATTAG----CTCTTTCCATTCTTTGC-CC-----------CCAGCATGAG---------------TTAACTCGTGT-----------------------------------GGACTCTG-CAGTG------------------------------------------------------------------------------------------------------------------CGAGTAGTGACCCCAGCATACCTTGTC-CTCTGGACCTCCTGTCTTCTCTGCTTC-TGGGTACACGGTAGACTTTGTGGCATTTGATACAACTTGGACAATACCTAGTTTG-----------GAGGGGAGGG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5711918 195 - 180051392 TCTTTTGCTT--TTTCTGTGTATTAG----CTCTTTCCATTCTTTGC-CC-----------CCAGCGTGAG---------------TTAACTCGTGT-----------------------------------GGACTCTG-CAGTG------------------------------------------------------------------------------------------------------------------TAGGTAGTGGCCCCAGCATACCTTGTC-CTCTGGACCTCCTGTCTTCTCTGCTTT-TGGGTACATGGTAGACTTTGTGGCGTTTGATACAACTTGGACAATACTTAGTTTG-----------GA-GGGAGGG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5903712 195 - 181584905 TCTTTTGCTT--TTTCTGTGTATTAG----CTCTTTCCATTCTTTGC-CC-----------CCAGCGTGAG---------------TTAACTCGTGT-----------------------------------GGACTCTG-CAGTG------------------------------------------------------------------------------------------------------------------TAGGTAGTGCCCCCAGCATACCTTGTC-CTCTGGACCTCCTGTCTTCTCTGCTTT-TGGGTACATGGTAGACTCTGTGGCGTTTGATACAACTTGGACAATACTTAGTTTG-----------GA-GGGAGGG i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 932789 195 - 16193990 TCTTTTGCTT--TTTCTGTGTATTAG----CTCTTTCCATTCTTTGC-CC-----------CCAGCGTGAG---------------TTAACTTGTGT-----------------------------------GGACTCTG-CAGTG------------------------------------------------------------------------------------------------------------------TAGGTAGTGACCCCAGCATACCTTGTC-CTCTGGATCTCCTGTCTTCTCTGCTTT-TGGGTACATGGTAGACTTTGTGGCGTTTGATACAACTTGGACAATACTTAGTTTG-----------GA-GGGAGGG i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1749806 195 - 21434487 TCTTTTGCTT--TTTCTGTGTATTAG----CTCTTTCCATTCTTTGC-CC-----------CCAGTGTGAG---------------TTAACTCGTGT-----------------------------------GGACTCTG-CAGTG------------------------------------------------------------------------------------------------------------------TAGGTAGTGACCCCAGCATACCTTGTC-CTCTGGACCTCCTGTCTTCTCTGCTTT-TGGGTACATGGTAGACTTTGTGGCGTTTAATACAACTTGGACAATACTTAGTTTG-----------GA-GGGAGGG i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4718677 195 - 82825804 TCTTCTGCTT--TTTCTGTGTATTAG----CTCTTTCCATTCTTTGC-CC-----------CCAGTGTGAG---------------TTAACTCGTGT-----------------------------------GGACTCTG-CAGTG------------------------------------------------------------------------------------------------------------------TAGGTAGTGACCCCAGCATACCTTGTC-CTCTGGACCTCCTGTCTTCTCTGCTTT-TGGGTACATGGTAGACTTTGTGGCGTTTGATACAACTTGGACAATACTTAGTTTG-----------GA-GGGAGGG i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 214007 195 + 2521317 TCTTTTGCTT--TTTCTGTGTATTAG----CTCTTTCCATTCTTTGC-CC-----------CCAGTGTGAG---------------TTAACTCGTGT-----------------------------------GGACTCTG-CAGTG------------------------------------------------------------------------------------------------------------------TAGGTAGTGACCCCAGCATACCTTGTC-CTCTGGACCTCCTGTCTTCTCTGCTTT-TGGGTTCATGGTAGACTTTGTGGCATTTAATACAACTTGGACAATACTTAGTTTG-----------GA-GGGAGGG i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1705096 195 - 2415367 TCTTTTGCTT--TTTCTGTGTATTAG----CTCTTTCTATTCTTTGC-CC-----------CCAGCGTGAG---------------TTAACTCGTGT-----------------------------------GGACTCTG-CAGTG------------------------------------------------------------------------------------------------------------------TGGGTAGTGACCCCAGCATACTTTGTC-CTCTGGACCTCCTGTCTTCTCTGCTTT-TGGGTACTTGGTAGACTTTGTGACGTTTGATACAACTTGGACTATACTTAGTCTG-----------GA-GGGAGAG i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142777230 193 - 204313951 TCTTTTGATT---TTTTGTGTATTAG----CTCTTTCCATTCTTTGC-CC-----------CGAGCATGAG---------------TTAGCCTTTGC-----------------------------------GGACTCTG-CAGTG------------------------------------------------------------------------------------------------------------------CGGGTAGTGA-CCCAGCATACCTTGTC-CTCCAGACCTCCTGTCTTCTCTGCTTT-TGGGTACATGGTATACTTTGTGGACTTTGATAAAACTTGGAAAATACTTAGTTTG-----------GA-GGGAGGG i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2175015 194 + 10068113 TCTTTTGCTT--GTTTTGTGTATTAG----CTCTTTCCATTCTTTGC-CC-----------CGAGCACGAG---------------TCAGCCTTCGC-----------------------------------GGACCCTG-CAGTG------------------------------------------------------------------------------------------------------------------CGGGTAGGGA-CCCAGCCCACCTTGTC-CTCCAGACCTCCTGTCTTCTCTGCTTT-TGAGTACGTGTTAGACTTTGTGGACTTTGATAAAACTTGGACAATACCTAGTTTG-----------GA-GGGAGGG i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 30766 195 - 709587 TCTTTTGCTTTTTTTCTGTGTATTAG----CTTTTTCCATTCTTTGC-CC-----------CGAGCATGAG---------------TTAGCCTTTGC-----------------------------------GGATTCTG-CAGTG------------------------------------------------------------------------------------------------------------------CGGGCAGTGA-CCCAGCATACCTTGTA-CTCCGGACCTCCTGTCTTCTCTGCTTT-TG-GTACATGTTATACTTTGTGGACTGTGATAAAACCTGGACAATACCTAGTTTG-----------GA-GGGAGGA i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1121379 194 - 2246441 TCTTTTGCTT--TTTTTGTGTATTAG----CTCTTTCCATTCTTTGC-CC-----------CGAGCATGAG---------------CTAGCCTTTGT-----------------------------------GGACTCTG-CAGTG------------------------------------------------------------------------------------------------------------------CGGGTAGTGA-CCCAGCGTACCTTGTC-CTCCAGACCTCCTGTCTTCTCTGCTTT-TGGGTACATGTTATACTTTGTGGACTTTGATAAAACTTGGACAATACCTAGTTTG-----------GA-GGGAGGG i aotNan1.NW_018501968v1 I 3848 C 0 s proCoq1.NW_012152163v1 702516 194 - 940639 TCCCTTCCTT--ATTGTGTGTTTTAG----CTGTTTCCATTTTTCCCTTT-----------CCAGCATCAG---------------TTAGCTAATGA-----------------------------------GGACTCTA-CAGTG------------------------------------------------------------------------------------------------------------------TGGGTAAAGACCCCAGCATAC-TTGTC-CTCGGGACC-CCTGTCTTCTCTGCTTT-TGGATATATGGGGGATTTTGTTGAGCTTGATACTACTTGGACAATAACTAGTTTG-----------GT-GGAAGGG i proCoq1.NW_012152163v1 C 0 I 18 s otoGar3.GL873522 1202924 188 + 48283576 TGCTTTCCTT--ATTGTTTGTGTTGG----CTATTTCCATTCTTCCCTTT-----------CCGGCATCAG---------------TTAGCTAAGGA-----------------------------------ACACTCTA-CAGTA------------------------------------------------------------------------------------------------------------------TGGAGAATGACCCCATCATAT-TTGTC-CTTGGGACCTCCTGTCTTCTTCACTTA-GGGGTATATGGTGGGTTTTGTTGAGCTTGACAGTACTTGGAC-------TGTTTA-----------GA-GGAAGGG i otoGar3.GL873522 C 0 I 10 s canFam3.chr4 37151192 183 + 88276631 ----TTCCCT--TCTTGTTATGTGAG----CTTTTCCCATTCTTT---CC-----------CCTGCAGGAG--------------------------------------------------------------GGCTCTG-CA-------------------------------------------------------------------------------------------------------------------------CGATAACATCAGCATATCTTAACTCTGGGGACCTCCTGTCTTCTCTGCTTTTTGGGTATATGGTAGACTTTGTTGGGTTTGCTTCTGCTTGGACAATACCTACCTTGAGTGAGTGAGTGA-GGAAGGG i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 220763 367 - 960158 TTCCTTTCAT--GTTTGTTATATTAGAAGCCTGGTTCCATTCCTTCC-CCACCCTACCCCTCCAGTTTAAGATTTCTTTTATAACTTTAGTTTGCATTGCTGTTGTTCAAGCACCTCCTGAATTTTACTCCAGGTCTCTGACAGTGGTTCCCCTCTCATCTTGTTAGTACTTCTGACCTCTCGCTTTACGAGTTGGTCTGCAGCCATACTTGCCAGTAGTTGACACTTTGCCTGAAGTTCCTCAAGGCTCCTTAGGGCTCTGGATTGTGACAGAAGCATACTTGGTC-TTTGGGGACCTTTGTTTTC---------TGGGTGTATGGTAGACTTCGTTGGATTTTCTACTGCTTGGATACTACCAAATTGG-----------TA-GGGGGGA i dasNov3.JH562710 C 0 C 0 e mm10.chr13 65961596 2256 - 120421639 I a score=89810.000000 s hg38.chr5_KI270795v1_alt 18706 8 + 131892 GAATGGAA- s panTro5.chr5 5267160 8 - 181907262 GAATGGAA- i panTro5.chr5 C 0 C 0 s panPan2.chr5 5529645 8 - 183735486 GAATGGAA- i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1627369 8 + 3967317 GAATGGAA- i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4479400 8 + 163208435 GAATGGAA- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5712113 8 - 180051392 GAATGGAA- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5903907 8 - 181584905 GAATGGAA- i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 932984 8 - 16193990 GAATGGAA- i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1750001 8 - 21434487 GAATGGAA- i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4718872 8 - 82825804 GAATGGAA- i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 214202 8 + 2521317 GAATGGAA- i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1705291 8 - 2415367 GAATGGAA- i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142777423 8 - 204313951 GAATGGAA- i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2175209 8 + 10068113 GAATGGAA- i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 30961 8 - 709587 GAATGGAA- i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1121573 8 - 2246441 GAATGGAA- i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1203122 7 + 48283576 -GGTGGGA- i otoGar3.GL873522 I 10 I 1 s canFam3.chr4 37151375 5 + 88276631 ---TGAGA- i canFam3.chr4 C 0 I 1 s dasNov3.JH562710 221130 8 - 960158 -GTTGGGGA i dasNov3.JH562710 C 0 C 0 e mm10.chr13 65961596 2256 - 120421639 I e proCoq1.NW_012152163v1 702710 18 - 940639 I a score=593026.000000 s hg38.chr5_KI270795v1_alt 18714 58 + 131892 -GGGCATGGAAGTTTTTTt-a--aataattaaaaaa-----a---ta-tatatataaTTTTGAGAATTGAG s panTro5.chr5 5267168 58 - 181907262 -GGGCATGGAAGTTTTTTt-a--aataattaaaaaa-----a---ta-tatatataaTTTTGAGAATTGAG i panTro5.chr5 C 0 C 0 s panPan2.chr5 5529653 58 - 183735486 -GGGCATGGAAGTTTTTTt-a--aataattaaaaaa-----a---ta-tatatataaTTTTGAGAATTGAG i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1627377 58 + 3967317 -GGGCATGGAAGTTTTTTT-A--AATAATTTAAAAA-----A---TA-TATATATAATTTTGAGAATTGAG i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4479408 63 + 163208435 -GGGCGTGGAAGTTTTTAA-A--AATAATTTTAAAAAATATA---CA-TATATATAATTTTGAGAATTGAG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5712121 58 - 180051392 -AGGTATGGAAAATTTTTT-A--AATAATTAAAAAT-----A---TA-TATATATAATTTTGAGAATTGAG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5903915 58 - 181584905 -AGGTATGGAAAATTTTTT-A--AATAATTAAAAAT-----A---TA-TATATATAATTTTGAGAATTGAG i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 932992 58 - 16193990 -AGGTATGGAAAATTTTTT-A--AATAATTAAAAAT-----A---TA-TATATATAATTTTGAGAATTGAG i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1750009 58 - 21434487 -AGGTATGGAAAATTTTTT-A--AATAATTAAAAAT-----A---TA-TATATATAATTTTGAGAATTGAG i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4718880 58 - 82825804 -AGGTATGGAAAATTTTTT-A--AATAATTAAAAAT-----A---TA-TATATATAATTTTGAGAATTGAG i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 214210 58 + 2521317 -GGGTATGGAAAATTTTTT-A--AATAATTAAAAAT-----A---TA-TATATATAATTTTGAGAATTGAG i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1705299 52 - 2415367 -GGATATGGAAATTTTTAA-A--AATAAT------T-----A---TA-TATATATAATTTTGAGAATTGAG i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142777431 53 - 204313951 -GAGCATGGAAGttttttt-a--aataattaaaaaa--------------tataCAATTTTGAGAATTGAG i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2175217 54 + 10068113 -GAGCATGGAAGtttttttaa--aataattaagaaa--------------tatataattttGAGAATTGAG i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 30969 53 - 709587 -GAGCATGGAAGTTTTTTT-A--AATAATTAAAAAA--------------TATATAATTTTGAGAATTGAG i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1121581 53 - 2246441 -GAGCATGGAAGTTTTTTA-A--AATAATTTAAAAA--------------TATATAATTTTGAGAATTGAG i aotNan1.NW_018501968v1 C 0 I 7827 s proCoq1.NW_012152163v1 702728 59 - 940639 -GGGTATGGAGGGCTTTTT-T--AATAATTAAAAAA-----G---AAATATATATAATTTTGGGAATTGAG i proCoq1.NW_012152163v1 I 18 C 0 s otoGar3.GL873522 1203130 56 + 48283576 -AGGCATGGAGGGGTTTTT-C---ATAACTAAAAAA-----G---AA--ATATATAACTTCAAGAATTGAA i otoGar3.GL873522 I 1 C 0 s canFam3.chr4 37151381 55 + 88276631 -GGGGATGGAGATTTTTTT-A-----TAGTAAAAAG-----A---AA-TGTATATAATTTTTCGAGTTGAG i canFam3.chr4 I 1 C 0 s dasNov3.JH562710 221138 64 - 960158 TGGTGATGGAGtttttttt-tttaataattaaaaaG-----GAGTTA-TGTGTATAATTTTGAGAATTGAG i dasNov3.JH562710 C 0 C 0 e mm10.chr13 65961596 2256 - 120421639 I a score=183730.000000 s hg38.chr5_KI270795v1_alt 18772 11 + 131892 CATTTAATAAA- s panTro5.chr5 5267226 11 - 181907262 CATTTAATAAA- i panTro5.chr5 C 0 C 0 s panPan2.chr5 5529711 11 - 183735486 CATTTAATAAA- i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1627435 11 + 3967317 CATTTAATAAA- i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4479471 11 + 163208435 CATTTAATAAA- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5712179 11 - 180051392 CATTTAATAAA- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5903973 11 - 181584905 CATTTAATAAA- i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 933050 11 - 16193990 CATTTAATAAA- i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1750067 11 - 21434487 CATTTAATAAA- i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4718938 11 - 82825804 CATTTAATAAA- i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 214268 11 + 2521317 CATTTAATAAA- i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1705351 11 - 2415367 CATTTAATAAA- i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142777484 11 - 204313951 CATTTAATAAA- i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2175271 11 + 10068113 CATTTAATAAA- i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 31022 11 - 709587 CATTTAATAAA- i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1129461 11 - 2246441 CATTTAATAAA- i aotNan1.NW_018501968v1 I 7827 C 0 s proCoq1.NW_012152163v1 702787 11 - 940639 CATTTAATAAA- i proCoq1.NW_012152163v1 C 0 I 98 s otoGar3.GL873522 1203186 11 + 48283576 CATTTAATAAA- i otoGar3.GL873522 C 0 I 1 s canFam3.chr4 37151436 11 + 88276631 CATTTAATAAA- i canFam3.chr4 C 0 I 1 s dasNov3.JH562710 221202 12 - 960158 CATTTAATAAAA i dasNov3.JH562710 C 0 C 0 e mm10.chr13 65961596 2256 - 120421639 I a score=839971.000000 s hg38.chr5_KI270795v1_alt 18783 95 + 131892 CTGAC-------TTTTGTTATTATGGAACTTCTAAGACTTTTAAAAT--------TA------TTATGTCCTT--------------------GAGTT-GCAGTTTTGTATTTTTTTTTTTTTAATTTCAGAAAGAG s panTro5.chr5 5267237 95 - 181907262 CTGAC-------TTTTGTTATTATGGAACTTCTAAGACTTTTAAAAT--------TA------TTATGTCCTT--------------------GAGTT-GCAGTTTTGTATTTTTTTTTTTTTAATTTCAGAAAGAG i panTro5.chr5 C 0 C 0 s panPan2.chr5 5529722 92 - 183735486 CTGAC-------TTTTGTTATTATGGAACTTCTAAGACTTTTAAAAT--------TA------TTATGTCCTT--------------------GAGTT-GCAGTTTTGTA-TTTTTTTTTTTTAATTTCAGAA--AG i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1627446 92 + 3967317 CTGAC-------TTTTGTTATTATGGAACTTCTAAGACTTTTAAAAT--------TA------TTATGTCCTT--------------------GAGTT-GCAGTTTTGTA---TTTTTTTTTTAATTTCAGAAAGAG i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4479482 90 + 163208435 CTGAC-------TTTTGTTATTATGGAACTTCTAAGACTTTTAAAAT--------TA------TTATGTCCTT--------------------GAATT-GCAGTTTTGTA---TTTTTTTTTTAATTTCAGAA--AG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5712190 93 - 180051392 CTGAC------TTTTTTTTATTATGGCACTTCTAAGACTTTAAAAAT--------TA------TTATGTCCTT--------------------ATGTT-GCAGTTTTGTA---TTTTTTTTTTAATTTGAGAAAGAG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5903984 92 - 181584905 CTGAC-------TTTTTTTATTATGGCACTTCTAAGACTTTAAAAAT--------TA------TTATGTCCTT--------------------ATGTT-GCAGTTTTGTA---TTTTTTTTTTAATTTGAGAAAGAG i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 933061 92 - 16193990 CTGAC-------TTTTTTTATTATGGCACTTCTAAGACTTTAAAAAT--------TA------TTATGTCCTT--------------------ATGTT-GCAGTTTTGTA---TTTTTTTTTTAATTTGAGAAAGAG i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1750078 92 - 21434487 CTGAC-------TTTTTTTATTATGGCACTTCTAAGACTTTAAAAAT--------TA------TTATGTCCTT--------------------ATGTT-GCAGTTTTGTA---TTTTTTTTTTAATTTCAGAAAGAG i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4718949 92 - 82825804 CTGAC-------TTTTTTTATTATGGCACTTCTAAGACTTTAAAAAT--------TA------TTATGTCCTT--------------------ATGTT-GCAGTTTTGTA---TTTTTTTTTTAATTTCAGAAAGAG i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 214279 93 + 2521317 CTGAC-------TTTTTTTATTATGGCACTTCTAAGACTTTAAAAAT--------TA------TTATGTCCTT--------------------ATGTT-GCAGTTTTGTA--TTTTTTTTTTTAATTTCAGAAAGAG i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1705362 91 - 2415367 CTGAC-------TTTTTTTATTATGGCACTTCTAAGACTTTAAAAAT--------TA------TTATGTCCTT--------------------ATGTT-GCAGTTTTGTA----TTTTTTTTTAATTTCAGAAAGAG i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142777495 89 - 204313951 CTGAC------TTTTTTAAATTATGGAACTTCTAAGACTT--AAAAT--------TA------TTATGTTCTT--------------------ATGTT-GTAGTTTTGTA-----TTTTTTTTAATTTCAGAAAGAG i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2175282 91 + 10068113 TGACT------TTTTTTTTATTATGGAACTTCTAAGACTT--AAAAT--------TC------TTATGCCCTT--------------------ATGTT-GCAGTTTTGTA---TTTTTTTTTTAATTTCAGAAAGAG i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 31033 90 - 709587 CTGAC----TTTTTTTTTTATTATGGAAC--CTAAGAC----AAAAT--------TA------TTATGTCCTT--------------------ATGTT-GCAGTTTTGTA--TTTTTTTTTTTAATTTCAGAAAGAG i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1129472 98 - 2246441 CTGACTTTTTTTTTTTTTTATTATGGAACTTCTAAGACTT--AAAAT--------TA------TTATGTCCTT--------------------ATGTT-GCAGTTTTGTG--TTTTTTGTTTTAATTTCAGAAAGAG i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1203198 95 + 48283576 CTGTC--------CTTTTAATTATGAGACTTCTAAGATACTTAAAATTATGGTACTA------TTGTATTCTT--------------------ATATT-GCA-CTTTGTA----TTTTTTTAAAATCTTAAAATA-- i otoGar3.GL873522 I 1 C 0 s canFam3.chr4 37151448 108 + 88276631 CTGAC-------T-------TTATGGGACTTCTGAGACTTTAAAAGT--------TATGGTATTTGTGTTGTTATTGTTGCTCATATTGGAAGATGTT-GCAGTTTTGTA----TTTAAAAAAAATCTCAAATTA-- i canFam3.chr4 I 1 C 0 s dasNov3.JH562710 221214 83 - 960158 CTGAC-----------TTAATTCTAGAACTTTT-----TT------T--------TA------TTATGTTATT------------ACAGGGAGATGTTGGCAGGTTTGCA----TTTTTCGAAAGTCCCCAAAAT-- i dasNov3.JH562710 C 0 C 0 e mm10.chr13 65961596 2256 - 120421639 I e proCoq1.NW_012152163v1 702798 98 - 940639 I a score=719582.000000 s hg38.chr5_KI270795v1_alt 18878 55 + 131892 AATTTAAATGT---TATAA----TTCTGTCATTTAATGTCCCAACCAAGAAGCCTCTGAAAT s panTro5.chr5 5267332 55 - 181907262 AATTTAAATGT---TGTAA----TTCTGTCATTTAATGTCCCAACAAAGAAGCCTCTGAAAT i panTro5.chr5 C 0 C 0 s panPan2.chr5 5529814 55 - 183735486 AATTTAAATGT---TGTAA----TTCTGTCATTTAATGTCCCAACAAAGAAGCCTTTGAAAT i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1627538 55 + 3967317 AATTTAAATGT---TATAA----TTCTGTCATTTAATGTCCCAACCAAGAAACCTCTGAAAT i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4479572 54 + 163208435 AATTTAAATGT---TATAA-----TCTGTCATTTAATGTCCCAACCAAGAAGCCTCTGAAAT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5712283 55 - 180051392 AATTTAAATGT---TATAA----TTCTGTCATTTAAATTCCCAACCAATAACCCTCTGAAAT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5904076 55 - 181584905 AATTTAAATGT---TATAA----TTCTGTCATTTAAATTCCCAACCAATAACCCTCTGAAAT i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 933153 55 - 16193990 AATTTAAGTGT---TATAA----TTCTGTCATTTAAATTCCCAACCAATAGCCCTCTGAAAT i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1750170 55 - 21434487 AATTTAAATGT---TATAA----TTCTGTCATTTAATGTCCCAACCAATAACCCTCTGAAAT i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4719041 55 - 82825804 AATTTAAATGT---TATAA----TTCTGTCATTTAATGTCCCAACCAATAACCCTCTGAAAT i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 214372 55 + 2521317 AATTTAAATGT---TATAA----TTCTGTCATTTAATGTCCCAACCAATAACCCTCTGAAAT i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1705453 55 - 2415367 AATTTAAATGT---CATAA----TTCTATCATTTAATATCCCAACCAATAACCCTCTGAAAT i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142777584 55 - 204313951 AACTTAAATAT---TATAA----TTCTTTCATTTAATGTCGCAACCAAGAACCCTCTGAAAT i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2175373 55 + 10068113 AACTTAAATAT---TATAA----TTCTTTCATTTAATGTCACAACCGAGAACCCTCTGAAAT i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 31123 55 - 709587 AACTTAAATAT---TATAA----TTCTTTCATTTAATGTCACAACCAAGAACCCTCTGAAAT i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1129570 55 - 2246441 AATTTAAATAT---TATAA----TTCTTTCATTTAATGTCACAACCAAGAGCCCTCTGAAAT i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 702896 55 - 940639 AATTTAAGTGT---TATAA----TTCTGTCATTTAATGTTCTAAAGAAGAACACTGTGAAAT i proCoq1.NW_012152163v1 I 98 C 0 s otoGar3.GL873522 1203293 55 + 48283576 GAGTTAAATGT---TATAA----TTCTGTTGTTTAACATCCTAACCAAAAACACTATGAAAT i otoGar3.GL873522 C 0 C 0 s canFam3.chr4 37151556 59 + 88276631 AATTTAGAGGT---TGTAATTAATTCTGTCATTTAATGTCCTAACCAAGAATTCTGTGAAAT i canFam3.chr4 C 0 I 192 s dasNov3.JH562710 221297 58 - 960158 AGACTAAAGGTTACTATCA----TTCTGTCATTTAATGCCCTAATCAAGAATTCTGTCAAAT i dasNov3.JH562710 C 0 C 0 e mm10.chr13 65961596 2256 - 120421639 I a score=141808.000000 s hg38.chr5_KI270795v1_alt 18933 11 + 131892 ataggga--------------------------------caaa s panTro5.chr5 5267387 11 - 181907262 ataggga--------------------------------caaa i panTro5.chr5 C 0 C 0 s panPan2.chr5 5529869 11 - 183735486 ataggga--------------------------------caaa i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1627593 11 + 3967317 ACAGGGA--------------------------------CAAA i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4479626 11 + 163208435 GTAGGGA--------------------------------CAAA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5712338 11 - 180051392 ataggga--------------------------------caaa i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5904131 11 - 181584905 ataggga--------------------------------caaa i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 933208 11 - 16193990 ataggga--------------------------------caaa i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1750225 11 - 21434487 ataggga--------------------------------caaa i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4719096 11 - 82825804 ataggga--------------------------------caaa i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 214427 11 + 2521317 ataggga--------------------------------caaa i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1705508 11 - 2415367 Gtaggga--------------------------------caaa i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142777639 11 - 204313951 Gtaagga--------------------------------caaa i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2175428 11 + 10068113 Gtaagga--------------------------------caaa i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 31178 11 - 709587 Gtaagga--------------------------------caaa i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1129625 11 - 2246441 Gtaagga--------------------------------caaa i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 702951 11 - 940639 GTAGGGA--------------------------------CAAA i proCoq1.NW_012152163v1 C 0 C 0 s otoGar3.GL873522 1203348 11 + 48283576 GTGGGGA--------------------------------CAAA i otoGar3.GL873522 C 0 I 226 s canFam3.chr4 37151807 43 + 88276631 ataggaaggcgagactggggaaattaaaatagaaatatgcaaa i canFam3.chr4 I 192 I 9 s dasNov3.JH562710 221355 11 - 960158 GCAGGGA--------------------------------CAAA i dasNov3.JH562710 C 0 C 0 e mm10.chr13 65961596 2256 - 120421639 I a score=14725.000000 s hg38.chr5_KI270795v1_alt 18944 1 + 131892 g s panTro5.chr5 5267398 1 - 181907262 g i panTro5.chr5 C 0 C 0 s panPan2.chr5 5529880 1 - 183735486 g i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1627604 1 + 3967317 G i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4479637 1 + 163208435 G i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5712349 1 - 180051392 g i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5904142 1 - 181584905 g i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 933219 1 - 16193990 g i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1750236 1 - 21434487 g i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4719107 1 - 82825804 g i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 214438 1 + 2521317 g i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1705519 1 - 2415367 g i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142777650 1 - 204313951 g i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2175439 1 + 10068113 g i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 31189 1 - 709587 g i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1129636 1 - 2246441 g i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 702962 1 - 940639 G i proCoq1.NW_012152163v1 C 0 C 0 s otoGar3.GL873522 1203585 1 + 48283576 g i otoGar3.GL873522 I 226 C 0 s canFam3.chr4 37151859 1 + 88276631 c i canFam3.chr4 I 9 C 0 s dasNov3.JH562710 221366 1 - 960158 G i dasNov3.JH562710 C 0 I 232 e mm10.chr13 65961596 2256 - 120421639 I a score=36290.000000 s hg38.chr5_KI270795v1_alt 18945 2 + 131892 ct s panTro5.chr5 5267399 2 - 181907262 ct i panTro5.chr5 C 0 C 0 s panPan2.chr5 5529881 2 - 183735486 ct i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1627605 2 + 3967317 CT i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4479638 2 + 163208435 CT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5712350 2 - 180051392 ct i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5904143 2 - 181584905 ct i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 933220 2 - 16193990 ct i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1750237 2 - 21434487 ct i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4719108 2 - 82825804 ct i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 214439 2 + 2521317 ct i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1705520 2 - 2415367 ct i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142777651 2 - 204313951 ct i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2175440 2 + 10068113 ct i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 31190 2 - 709587 ct i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1129637 2 - 2246441 ct i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 702963 2 - 940639 CT i proCoq1.NW_012152163v1 C 0 I 527 s otoGar3.GL873522 1203586 2 + 48283576 ct i otoGar3.GL873522 C 0 C 0 s canFam3.chr4 37151860 2 + 88276631 ct i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 221599 2 - 960158 ct i dasNov3.JH562710 I 232 C 0 e mm10.chr13 65961596 2256 - 120421639 I a score=2637492.000000 s hg38.chr5_KI270795v1_alt 18947 251 + 131892 aattgaatgaccgaactaaaattttgactctgagcttcctggtggcaaagtgaagaggggagtaagtcagttagct----------------------------------ttcttattgaaaagaaaa---------------------------------------------------------------------------------------acactt----------------attggttcctcatg--------------------------------------------------gaaagcaaagc-tttATTAGTTCTTCCCTCTAAAAAAAAGGGCTTATGTTT-GGGGGGTTGTTACCTAAGAGCAGTG----GT---TTTTCATTATATTGTAATTTTGTTTGGTGTTAAAGCAAATATTGAGGCATA---TAGAAATAG s panTro5.chr5 5267401 252 - 181907262 aattgaatgaccgaactaaaattttggctctgagcttcctggtggcaaagtgaagaggggagtaagtcagttagct----------------------------------ttcttattgaaaagaaaa---------------------------------------------------------------------------------------acactt----------------attggttcctcatg--------------------------------------------------gaaagcaaagc-tttATTAGTTCTTCCCTCTTAAAAAAAGGGCTTATGTTTGGGGGGGTTGTTACCTAAGAGCAGTA----GT---TTTTCATTATATTGTAATTTTCTTTGGTGTTAAAGCAAATATTGAGGCATA---TAGAAATAG i panTro5.chr5 C 0 C 0 s panPan2.chr5 5529883 252 - 183735486 aattgaatgaccgaactaaaattttggctctgagcttcctggtggcaaagtgaagaggggagtaagtcagttagct----------------------------------ttcttattgaaaagaaaa---------------------------------------------------------------------------------------acactt----------------attggttcctcatg--------------------------------------------------gaaagcaaagc-tttATTAGTTCTTCCCTCTTAAAAAAAGGGCTTATGTTTGGGGGGGTTGTTACCTGAGAGCAGTA----GT---TTTTCATTATATTGTAATTTTCTTTGGTGTTAAAGCAAATATTGAGGCATA---TAGAAATAG i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1627607 250 + 3967317 AATTGAatgactgaactaaaattttggctctgagcttcctggtggcaaagtgaagaggggagtaagtcagttagct----------------------------------ttcttattgaaaagaaaa---------------------------------------------------------------------------------------acactt----------------attggttcctcatg--------------------------------------------------gaaagcaaagc-tttATTAGTTCTTCCCTCTAAAAAAAAGGGCTTATGTTT--GGGGGTTGTTACCTAAGAGCAGTA----GT---TTTTCATTATATTGTAATTTTCTTTGGTGTTAAAGCAAATATTGAGGCATA---TAGAAATAG i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4479640 251 + 163208435 AATTGAATGCCtgaactgaaattttggctctgagcttcctggtggcaaagtgaagaggggagtaagtcagttagct----------------------------------ttcttattgaaaagaaaa---------------------------------------------------------------------------------------acactt----------------attggttcctcatg--------------------------------------------------gaaagcaaagc-tttATTAGTTCTTCCCTCTAAAAAAACGGGCTTATGTTT-GGGGGGTTGTTACCTAAGAGCAGTA----GT---TTTTCATTATATTGTAATTTTCTTCGGTGTTAAAGCAAATACTGAGGCGTA---TAGAAATAG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5712352 250 - 180051392 aattgaatgactgaactaaaattttggctctgagcttcctggtggcaaagtaaagaggggagtaagtcagttagct----------------------------------ttcttattgaaaagaaaa---------------------------------------------------------------------------------------acactt----------------agtggttcctcatg--------------------------------------------------gagagcaaagc-tttATTAGTTCTTCCCTTTAAAAAAAAGGGCTTGTGTTG-GGGAGGTTGTTACCTAAGAGCAGTA----GT---TTTTCATTATATTGTAATTTTTTTTGGTGTTAAAGCAAATACTGAGGCATA---CAGAAATA- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5904145 250 - 181584905 aattgaatgactgaactaaaattttggctctgagcttcctggtggcaaagtaaagaggggagtaagtcagttagct----------------------------------ttcttattgaaaagaaaa---------------------------------------------------------------------------------------acactt----------------agtggttcctcatg--------------------------------------------------gagagcaaagc-tttATTAGTTCTTCCCTTTAAAGAAAAGGGCTTGTGTTG-GGGAGGTTGTTACCTAAGAGCAGTA----GT---TTTTCATTATATTGTAATTTTTTTTGGTGTTAAAGCAAATACTGAGGCATA---CAGAAATA- i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 933222 250 - 16193990 aattgaatgactgaactaaaattttggctctgagcttcctggtggcaaagtaaagaggggagtaagtcagttagct----------------------------------ttcttattgaaaagaaaa---------------------------------------------------------------------------------------acactt----------------agtggttcctcatg--------------------------------------------------gagagcaaagc-tttATTAGTTCTTCCCTTTAAAAAAAAGGGCTTGTGTTG-GGGAGGTTGTTACCTAAGAGCAGTA----GT---TTTTCATTATATTGTAATTTTTTTTGGTGTTAAAGCAAATACTGAGGCATA---CAGAAATA- i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1750239 250 - 21434487 aattgaatgactgaactaaaattttggctctgagcttcctggtggcaaagtaaagaggggagtaagtcagttagct----------------------------------ttcttattgaaaagaaaa---------------------------------------------------------------------------------------acactt----------------agtggttcctcatg--------------------------------------------------gaaagcaaagc-tttATTAGTTCTTCCCTTTAAAAAAAAGGGCTTGTGTTG-GGGAGGTTGTTACCTAAGAGCAGTA----GT---TTTTCATTATATTGTAATTTTTTTTGGTGTTAAAGCAAATACCGAGGCATA---TAGAAATA- i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4719110 250 - 82825804 aattgaatgactgaactaaaattttgactctgagcttcctggtggcaaagtaaagaggggagtaagtcagttagct----------------------------------ttcttattgaaaagaaaa---------------------------------------------------------------------------------------acactt----------------agtggttcctcatg--------------------------------------------------gaaagcaaagc-tttATTAGTTCTTCCCTTTAAAAAAAAGGGCTTGTGTTG-GGGAGGTTGTTACCTAAGAGCAGTA----GT---TTTTCATTATATTGTAATTTTTTTTGGTGTTAAAGCAAATACTGAGGCATA---TAGAAATA- i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 214441 250 + 2521317 aattgaatgactgaactaaaattttggctctgagcttcctggtggcaaagtaaagaggggagtaagtcagttagct----------------------------------ttcttattgaaaagaaaa---------------------------------------------------------------------------------------acactt----------------agtggttcctcatg--------------------------------------------------gagagcaaagc-tttATTAGTTCTTCCCTTTAAAAAAAAGGGCTTGTGTTG-GGGAGGTTGTTACCTAAGAGCAGTA----GT---TTTTCATTATATTGTAATTTTTTTTGGTGTTAAAGCAAATACCGAGGCATA---TAGAAATA- i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1705522 246 - 2415367 aattgaatgactgagctaaaattttgactctgagcttcctggtggcaaagtaaagaagggagtaagtcagttagct----------------------------------ttcttattgaaaagaaaa---------------------------------------------------------------------------------------ac--------------------agtggttcctcatg--------------------------------------------------gaaagcaaagt-tttATTAGTTCTTCCCTTTAAAAAAAAGGGGTTGTGTTG-GGGAGGTTGTTACCTAAGAGCAGTA----GT---TTTTCATTATATTGTAATTTTTTTTGGTGTTAAAGCAAATACTGAGGCATA---TAGAAATA- i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142777653 248 - 204313951 aattgaatgactgaactaaaattttggctttgagcttcctggtggcaaagtgaagaggagagtaagtcagttagct----------------------------------ttcttattaaaaagaaaa---------------------------------------------------------------------------------------acactt----------------tctggttcctcatg--------------------------------------------------gaaagcaaagc-tttattagctcttccctctaaaagaaatggcttatgt---aggGGATTGTTACTTAAGAGAGGTA----TT---TTTTCATTATATTGTAATGGTTTTTGTTGTTAAAGCAGATACTGAGGCATA---TAGAAATA- i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2175442 223 + 10068113 aattgaacgactgaattaaaa-tttggctttgagcttcctggtggcaaagtgaagaggggagtaagtcagttagct----------------------------------ttcttattaaaaagaaca---------------------------------------------------------------------------------------acactt----------------tctggttcctcatg--------------------------------------------------gaaagcaaagc-tttattagttcttgcctctgaaagaaatggctt---------------------------aggta----tt---ttttcatTACATTGTAATGGTTTTTGGTGTTAAAGCAGATACTGAGGCATA---TAGAAATA- i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 31192 230 - 709587 aactgaacgactgaactaaaattttggctttgagcttcctggtggcaaagtgaagaggagagtaagtcagttagct----------------------------------ttcttgttaaaaagaaaa---------------------------------------------------------------------------------------acactt----------------tctggttcctcata--------------------------------------------------gaaagcaaagc-tttattagttcttccctctaaaagaaatggcttatgt---aagggattgttacttaagagaGGTA----TT---TTTTC------------------TTGGTGTTAGAGCAGATACTGAGGCATA---TAGAAATA- i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1129639 246 - 2246441 aattggacaactgaacaaaaattttggctttgagcttcctggtggcaaagtgaagaggagagtaagtcagttagct----------------------------------ttcttattaaaaagaaaa-----------------------------------------------------------------------------------------actt----------------tctggttcctcatg--------------------------------------------------gaaagcaaagc-tttattagttcttccttctaaaagaaatggcttatat---aggggaTTGTTACTTAAGAGAGGTA----TT---TTTTCATTATATTGTAATGGTTTTTGGTGTTAAAGCAGATACTGAGGCATA---TAGAAATA- i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1203588 205 + 48283576 aattgaatgattgaactaaaattttggct-tggggtccctgttggcaaagcgaagtggaggataagtcagttga------------------------------------ttcttattaaatagaaaa---------------------------------------------------------------------------------------acacat----------------gccagttcctcgtg--------------------------------------------------gaaagcaaagc-ttAATTAGTTCTTACCTTTAAA--AAATGGCTTATAT---AGTGGGTTGTTACCTATAAG---------------------------------------------AAAACAAA-ATAGAAATATACCTTAGTAA--- i otoGar3.GL873522 C 0 C 0 s canFam3.chr4 37151862 227 + 88276631 gactgaatgattgaactaaagttttggc--tgtgccccctggcggcaaagtgaagaaggga-taagtcaa----------------------------------------ttcttactgaaaagcagg---------------------------------------------------------------------------------------gcacat----------------gctcgttcttcagg--------------------------------------------------gaaaacagaacttttgttagctcttatctccaaaagaagtggcttgtgt---aggAGA---TTACCTGTGAGCAGTT----TTTGATTTTCATTGTATTTTAATGTATTTTGGGATTGAAA-------------ACA---TAAAAATA- i canFam3.chr4 C 0 I 15 s dasNov3.JH562710 221601 437 - 960158 acttggacagttgaacataaaatttgcctctgagttccctggtggcaaagtgaagagggagctaaattagttagttaattaaaatgaattaaaatgaaaaatatgccagcttcttagggaaagcaaaaggtttttttttctttattagagaaattgtgggtttgcagaaaaatcatgtataaaatataggattcccctgtaccaccctattattaacactttacattggtgtagagcatttgttacaaatgatgaTAGCATATTTTTATAATTGTACCTAGTAACTATGGCCAGTGTTTTAGAAAGGAAAGCTTTTGCTTGCTTTTACCTCAAACAGAAATGGCTCATGT---AGGGAATTGTTACGTATGAGCAATATATTGA---TTTCTATTGTATTTTAATGTATTTTGGCATATGAAAGGAAAACAAAACAGA------AAATG- i dasNov3.JH562710 C 0 C 0 e mm10.chr13 65961596 2256 - 120421639 I e proCoq1.NW_012152163v1 702965 527 - 940639 I a score=3789895.000000 s hg38.chr5_KI270795v1_alt 19198 295 + 131892 TGTTGgtagaaaat---------tttggaaaaag---ataagcaaaaagaaa-aatt-acattcctagcaccaagaggta---actgctattagaattttgatgtatatccttccagaagttttctcgtgtccatgtttatgtat-aAAAACATGTTT--------ATCTTCATA-----CATGAAGGGTAGACAAACCAAGTATGGCAAGATAAGTTAGGCAAGGTGCACAGCACCATGTTGGGGAGTATTATAAACACTCAACAAGTCTTAATAGACATTTGTAGttactgggcattcactacatgcctgctactataaggaac s panTro5.chr5 5267653 295 - 181907262 TGTTGgtagaaaat---------tttggaaaaag---ataagcaaaaagaaa-aatt-acattcctagcaccaagaggta---actgctattagaattttgatgtatatccttccagaagttttctcgtgtccatgtttatgtat-aAAAACATGTTT--------ATCTTCATA-----CATGAAGGGTAGACAAACCAAGTATGGCAAGATAAGTTAGGCAAGGTGCACAGCACCATGTTGGGGGGTATTATAAACACTCAACAAGTCTTAATAGACATTTGTAGttactgggcattcactacatgcctgctactgtaaggaac i panTro5.chr5 C 0 C 0 s panPan2.chr5 5530135 295 - 183735486 TGTTGgtagaaaat---------tttggaaaaag---ataagcaaaaagaaa-aatt-acactcctagcaccaagaggta---actgctattagaattttgatgtatatccttccagaagttttctcgtgtccatgtttatgtat-aAAAACATGTTT--------ATCTTCATA-----CATGAAGGGTAGACAAACCAAGTATGGCAAGATAAGTTAGGCAAGGTGCACAGCACCATGTTGGGGAGTATTATAAACACTCAACAAGTCTTAATAGACATTTGTAGttactgggcattcactacatgcctgctactataaggaac i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1627857 295 + 3967317 TGTTGgtagaaaat---------tttggaaaaag---ataagcaaaaagaaa-aatt-acattcctagcaccaagaggta---actgctattagaattttgatgtatatccttccagaagttttctcgtgtccatgtttatgtat-aAAAACATGTTT--------ATCTTCATA-----CATGAAGGGTAGACAAACAAAGTGTGGCAAGATAAGTTAGGCAAGGTGCACAGCACCATGTTGGGGAGTATTATAAACACTCAACACGTCTTAATAGACATTTGTAGttactgggcattcagtacatgcctgctactataaggaac i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4479891 295 + 163208435 TGTTGgtagaaaat---------tttggaaaaag---ataagcaaaaagaaa-aatt-acattcctagcaccaagaggta---actgctattagaattttgatatatatccttccagaagttttctcgtgtccatgtttatgtat-aAAAACATGTTT--------ATCTTCATA-----CATGAAGGGTAGACAAACCAAGTATGGCAAGATAAGTTAGGCAAGGTGCACAGCACCATGTTGGGGAGTATTATAAACACTCAACAAGTCTtaatagacatttgtagttactgggcattcactacatgcctgctactataaggaac i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5712602 295 - 180051392 CGTTGgtagaatat---------tttggaaaaag---gtaagcaaaaagaaa-aatt-acattcctaacaccaagaggta---actactattagaattttgatgtatatccttccagaagttttcttgtgtccatgtttatgtat-aAAAACATGTTT--------ATCTTCATA-----CACGAAGGGTAGACAAACCAAGTATGGCAAGATAAGTTAGGCAAGGGGCACAGCACCGTGTTGGGGAGTATTATAAACACTCAACAAGTCTTGACAGATATTTGTAGTTACTGGGCATTCTCTACATGCCTGCTACCATAAAGAAC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5904395 295 - 181584905 CGTTGGTAGAATAT---------TTTGGAAaaag---gtaagcaaaaagaaa-aatt-acattcctagcaccaagaggta---actactattagaattttgatgtatatccttccagaagttttcttgtgtccatgtttatgtat-aAAAACATGTTT--------ATCTTCATA-----CACGAAGGGTAGACAAACCAAGTATGGCAAGATAAGTTAGGCAAGGGGCACAGCACCGTGTTGGGGAGTATTATAAACACTCAACAAGTCTTGACAGATATTTGTAGTTACTGGGCATTCTCTACATGCCTGCTACCATAAAGAAC i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 933472 295 - 16193990 CGTTGGTAGAATAT---------TTTGGAAAAAG---GTAAGCAAAAAGAAA-AATT-ACATTCCTAGCAccaagaggta---actactattagaattttgatgtatatccttccagaagttttcttgtgTCCATGTTTATGTAT-AAAAACATGTTT--------ATCTTCATA-----CACGAAGGGTAGACAAACCAAGTATGGCAAGATAAGTTAGGCAAGGGGCACAGCACCGTGTTGGGGAGTATTATAAACACTCAACAAGTCTTGACAGATGTTTGTAGttactgggcattctctacatgcctgctaccataaagaac i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1750489 295 - 21434487 CGTTGGTAGAATAT---------TTTGGAAAAAG---GTAGGCAAAAAGAAA-AATT-ACATTCCTAGCGccaagaggta---actactattagaattttgatgtatatccttccagaagttttcttgtgTCCATGTTTATGTAT-AAAAACATGTTT--------ATCTTCATA-----CACGAAGGGTAGACAAACCAAGTATGGCAAGATAAGTTAGGCAAGGGGCACAGCACCATGTTGGGGAGTATTATAAACACTCAACAAATCTTGACAGATATTTGTAGTTACTGGGCATTCTCTACATGCCTGCTACCATAAAGAAC i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4719360 295 - 82825804 CGTTGGTAGGATAT---------TTTGGAAaaag---gtaagcaaaaagaaa-aatt-acattcctagcaccaagaggta---actactactagaattttgatgtatatccttccagaagttttcttgtgtccatgtttacgtat-aAAAACATGTTT--------ATCTTCATA-----CACGAAGGGTAGACAAACCAAGTATGGCAAGATAAGTTAGGCAAGGGGCACAGCACCATGTTGGCGAGTATTATAAACACTCCACAAGTCTTGACAGATATTTGTAGTTACTGGGCATTCTCTACATGCCTGCTACCATAAAGAAC i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 214691 295 + 2521317 CGTTGGTAGAATAT---------TTTGGAAAAAG---GTAGGCAaaaagaaa-aatt-acattcctagcaccaagaggta---actactattagaattttgatgtatatccttccagaagttttcttgtgtccatgtttatgtat-aAAAACATGTTT--------ATCTTCATA-----CACGAAGGGTAGACAAACCAAGCATGGCAAGATAAGTTAGGCAAGGGGCACAGCACCGTGTTGGGGAGTATTATAAACATTCAACAAGTCTTGACAGATATTTGTAGTTACTGGGCATTCTCTACATGCCTGCTACCATAAAGAAC i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1705768 295 - 2415367 CGTTGGTAGAAAAT---------TTTGGAAAAAG---GTAAGCAAAAAGAAA-AATT-ACATTCCTAGCAccaagaggta---actactattagaattttgatgtatatccttccagaagttttcttgtgTCCATGTTTATGTAT-AAAAACATGTTT--------ATCTTCATA-----CACAAAGGGTAGACAAACCAAGTATGGCAAGATAAGTTAGGCAAGGGGCATAGCACCGTGTTGGGGAGTATTATAAACACTCAACAAGTCTTGACAGACATTTGTAGTTACTGGGCATTCTCTGCATGCCTGCTACCATAAAGAAC i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142777901 297 - 204313951 TGTTGgtagaaaat---------tttagaaaaag---ataagcaaaaagaaa----taatattcctagcaccaagagata---accactattagaattttaatgtatatccttccagaagttttcctgtgcccacatttatatgt-aaaaacatgtct--------attttCATATGAATCTTGAAGGGTAGACAAACCAAGTGTGGCAAGATAAGTTAGGCAAGGTGCCCACCACCATGTTGGGGAGTATTAGAAACACTCAACAAGTCTTAATAGACATTTGTAGTTACTGGGCATTCGCTACATGTCTGCTACTCTAAAGAA- i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2175665 288 + 10068113 TGTTGgtagaaaat---------tttagaaaaag---ataagcaaaaagaaa----t-atattcctagcaccaagagata---accactattagaattttgatgtatgtccttccagaagttttcctgtgcccatatttatatgt-aaaaacatgtct--------attttCATATGAATCTTAAAGGGTAGACAGGCCAAGTGTGGCAAGACAAGTCAGGCAAGGTGCCCGCCACCATGCTGGGGAGTATTACA-------AACAAGGCTTAATAGACATTCGTAGTTGCTGGGCATTCGC--CACGTCTGCTACTCTAAAGAAC i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 31422 293 - 709587 TGTTGgtagaaaat---------tttagaaaaag---ataagcaaaaagaaa----t-atattcctagcaccaagagata---atcactattagaattttgatgtatgtccttccagaagctttcctgtgcccatatttatatgt-aaaaacatgtct--------attttCATATGAACCTTGAAGGGTAGACAAACCAAGTGTGGCAAGACAAGCTAGGCAAGGTGCCCACCACCGTGTTGGGGAGTATTACAAAC----AACAAGTCTTAATAGACATTTGTAGTTACTGGGCATTCGCTACATGTCTGCTACTATCAAGAAC i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1129885 294 - 2246441 TGTTGgtagaaaat---------tttagaaaaag---ataagcaaaaagaaa----t-atattcctagcaccaagagata---accactattagaattttgatgtgtatccttccagaagttttcccatgcccatatttataTGTAAAAAACATGTCT--------CTTTTCATATGAATCTTGAAGGGTAGACAAACCAAGTGTGGCAAGATAAGTTAGGCAAGGTGCCCACCACCATGTTGGGGAGTATTAGAAAC----AACAAGTCTTAATAGACATTTGTAGTTACTGGGCATTCGCTACATGTCTGCTACTATAAAGCAC i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 703492 297 - 940639 TGTttgtagaaaat---------tttggaaaaag---gtaagcagaaagaaa-aatc-atattcctagcaccaagtgata---accactattagcattttggtatatatccttccagaagtttttctgtgcccatatttatgtat-aaaaacatgttt--------atcttcataaaaATCTTGAAGAGTAGACAAATCAAATATGACAAAATAAATTAGGCAAGGTGCCCAGTACCATGTTGAGTAGTTT---AAACACTCAGCAAGTCTtaatagacagttttagttactgggcatttcttacatgtctggtactataatgagc i proCoq1.NW_012152163v1 I 527 C 0 s otoGar3.GL873522 1203793 284 + 48283576 --GTTGTAGAAAAT---------TCTGGGTAAAG---GCAAGCAAAAAGAAA-AGTC-ATATTCCTAGGATCAAGTAATA--------------CATTTTGATGTATATCCTTCCAGAAGTTTTTCTGTGCCTGTATTTATGTAT-AAAGACATGTTT--------ATCTTCATAAAAATCTTGAGGGGTAGACCAATCAAGTATGACAAGATGAATTAGGCGAGGTGCCCAGTACCATGTTGGGAAATAT---AAACACTTAGTGAGTCTtaatagacatttttagttactgggcattccttaaatgtctggtactgtaataagc i otoGar3.GL873522 C 0 C 0 s canFam3.chr4 37152104 312 + 88276631 TATTCATAGAAAAT---------TTTGGAAAAAGCAAGTAGGTGAAAAGAAAAAATT-GTAtttttctc-ccaagagatactcaccactattagcatttttgtgtgtatccttttaggagtttttctGTTGTCTTATTTATGTAT-AGAAACATGTTTACACAAACATGTTTATACAAATCTTGCAGAGTAGACAAATCAAGTATGataaggtaaaacatgcaaaatgctcagcaccatgttaagcagtattataaacactcagtaagtCTTAATAGAAAATTTTAATTATTAGATATTCCTT--AGgcttggtactgtaataagc i canFam3.chr4 I 15 C 0 s dasNov3.JH562710 222038 279 - 960158 CCCAAGTAAATGATATTTACTTACTTGGgaaaag----caggtaagtaaaaa-agca-atattgttagcaccaagattta---cccactattagcattttggtatatatccttccaAGAGTTTGC-TGGGCCCAT------------------TGTTT--------ATCTTCATA-AAATTTTGAGGGGTAGACAAAGCAA-TATGACAAAAAAAATCATGACTATTTCTCAGCCCAGTTTTGGGCAGTATTGTA-------AATAAATGTTAAAAGACATTTTTAGCTCTTGGGCATTTTCTTTGTGTCTGAGACTGTAACAC-- i dasNov3.JH562710 C 0 C 0 e mm10.chr13 65961596 2256 - 120421639 I a score=1102351.000000 s hg38.chr5_KI270795v1_alt 19493 81 + 131892 acttt-tatcagctgtt-actcagtg-tttgcagcagccttctg-agg-tggg---tgttatcaccatt-ttactacctcagggag-ttta s panTro5.chr5 5267948 81 - 181907262 acttt-tatcagctgtt-actcagtg-tttgcagcagccttctg-agg-tggg---tgttgtcaccatt-ttactacctcagggag-ttta i panTro5.chr5 C 0 C 0 s panPan2.chr5 5530430 81 - 183735486 acttt-tatcagctgtt-actcagtg-tttgcagcagccttctg-agg-tggg---tgttatcaccatt-ttactacctcagggag-ttta i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1628152 81 + 3967317 acttt-tatcagctgtt-actcagtg-tttgcaggagccttctg-agg-tggg---tgttatcaccatt-ttactacctcagggag-ttta i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4480186 81 + 163208435 acttt-tatcagctgtt-actccgtg-tttgcagcagccttctg-agg-tggg---tgttatcaccatt-gtactacctcagggag-ttta i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5712897 81 - 180051392 ACTTT-TGTCAGCTGTT-ACTCAGTG-TTTGCAGCAGCCTTCTG-AGG-TGGG---TGTTATCACCATT-TTACTACCTCAGGGAG-TTTA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5904690 81 - 181584905 ACTTT-TGTCAGCTGTT-ACTCAGTG-TTTGCAGCAGCCTTCTG-AGG-TGGG---TGTTATCACCATT-TTACTACCTCAGGGAG-TTTA i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 933767 81 - 16193990 acttt-tgtcagctgtt-actcagtg-tttgcagcagccttctg-agg-tggg---tgttatcaccatt-ttactacctcagggag-ttta i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1750784 81 - 21434487 ACTTT-TGTCAGCTGTT-ACTCAGTG-TTTGCAGCAGCCTTCTG-AGG-TGGG---TGTTATCACCATT-TTACTACCTCAGGGAG-TTTA i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4719655 81 - 82825804 ACTTT-TGTCAGCTGTT-ACTCAGTG-TTTGCAGCAGCCTTCTG-TGG-TGGG---TGTTATCACCATT-TTACTACCTCAGGGAG-TTTA i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 214986 81 + 2521317 ACTTT-TGTCAGCTGTT-ACTCAGTG-TTTGCAGCAGCCTTCTG-AGG-TGGG---TGTTATCACCATT-TTACTACCTCAGGGAG-TTTA i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1706063 81 - 2415367 ACTTT-TGTCAGCTGTT-ACTCAGTG-TTTGCAGCAGCCTTCTG-AGG-TGGG---TGTTATCACCATT-TTACTACCTCAGGGAG-TTTA i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142778198 82 - 204313951 CCTTT-TATCAGCTGTT-ACTCAGTG-TCTGCAGCAGCCTTCTG-AGG-TGGG---TGTTATCACCATTTTTGCTGCCTCAGGGAG-TTTA i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2175953 83 + 10068113 CCTTT-TATCAGCTGGT-ACTCAGTG-TTTGCAGCAGCCTTCTT-AGG-TGGG---TGTTATCACCATTTTTACTACCTCAGGGAGTTTTA i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 31715 83 - 709587 CCTTT-TATCAGCTGTTAACTCAGTG-TTTGCAGCAGCCTT----AGG-TGGGTGTTGTTATCACCATTCTTCCTACCTCAGGGAG-TTTA i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1130179 82 - 2246441 CCTTT-TATCAGCTGTT-ACTCAGCG-TTTGCCGCAGCCTTCTT-AGG-TGGG---TGTTATCACCATTTTTACTACCTCAGGGAG-TTTA i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 703789 82 - 940639 actttacatcagctgtt-actcagtt-tttgcaacagctttttg-agg-tggg---tgttatcaccgtt-ttacTACCTCAGGGAG-TTTA i proCoq1.NW_012152163v1 C 0 I 63 s otoGar3.GL873522 1204077 80 + 48283576 aatttacatcagctgtt-actcagtt-tttgcaacagctttttg-atg-tggg---tgttatcaacact-ttacTACCTCAGGGAG-TT-- i otoGar3.GL873522 C 0 C 0 s mm10.chr13 65963852 75 - 120421639 ACATT-TCTGAAATGTT-TTTTGTTGCTTTGAGGCAG-----TG-TGG-AGGG---TATTTTCGGC--T-TTATGATATTGGGGAT-TATG i mm10.chr13 I 2256 C 0 s canFam3.chr4 37152416 71 + 88276631 acttt-------------actcagtt-tttgcaacacacttctgcagt-tggg---tgttatcaccatt-ttaccactttaggaaa-ttta i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 222317 78 - 960158 ATTTTATGTCAGCAGCC-TCTCAGTT-CTTGCAACAGTCCTCTG-AGGTTGGA---TATTACC-----T-CTGTGGCCTCAAGGAA-TTTA i dasNov3.JH562710 C 0 C 0 a score=112107.000000 s hg38.chr5_KI270795v1_alt 19574 9 + 131892 agtaactca s panTro5.chr5 5268029 9 - 181907262 agtaactca i panTro5.chr5 C 0 C 0 s panPan2.chr5 5530511 9 - 183735486 agtaactca i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1628233 9 + 3967317 agtaactca i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4480267 9 + 163208435 agtaactca i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5712978 9 - 180051392 AGTAACTCA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5904771 9 - 181584905 AGTAACTCA i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 933848 9 - 16193990 agtaactca i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1750865 9 - 21434487 AGTAACTCA i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4719736 9 - 82825804 AGTAACTCA i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 215067 9 + 2521317 AGTAACTCA i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1706144 9 - 2415367 AGTAACTCA i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142778280 9 - 204313951 AGTAACTCA i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2176036 9 + 10068113 AGTAACTCA i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 31798 8 - 709587 AGTAACTC- i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1130261 9 - 2246441 AGTAACTCA i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1204157 7 + 48283576 --TAACTTG i otoGar3.GL873522 C 0 C 0 s mm10.chr13 65963927 8 - 120421639 GGTAACAC- i mm10.chr13 C 0 C 0 s dasNov3.JH562710 222395 9 - 960158 AGTAACTCA i dasNov3.JH562710 C 0 C 0 e canFam3.chr4 37152487 0 + 88276631 C e proCoq1.NW_012152163v1 703871 63 - 940639 I a score=2054392.000000 s hg38.chr5_KI270795v1_alt 19583 175 + 131892 gtgttactcatcaagtgactgtattcagatgtaggtttgtttaaaggccc--atgtgcc-ttTGCTTGTAATGGGCTACTC-TGTTTCTgcaagtattgccattcc---cgcttcacagatgaataaaccatggccatgagaagtcaactgttggcccaTATTAGTGA-GTGATGTGTT--GAGC--------- s panTro5.chr5 5268038 175 - 181907262 gtgttactcatcaagtgactgtattcagatctaggtttgtttaaaggccc--atgtgcc-tttacttgcaatgggctactc-TGTTTCTgcaagtattgccattcc---cgcctcacagatgaataaaccatggccatgagaagtcaactgttggcccaTATTAGTGA-GTGATGTGTT--GAGC--------- i panTro5.chr5 C 0 C 0 s panPan2.chr5 5530520 175 - 183735486 gtgttactcatcaagtgactgtattcagatctaggtttgtttaaaggccc--atgtgcc-tttgcttgcaatgggctactc-TGTTTCTgcaagtattgccattcc---cgcctcacagatgaataaaccatggccatgagaagtcaactgttggcccaTATTAGTGA-GTGATGTGTT--GAGC--------- i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1628242 175 + 3967317 gtgttactcatcaagtgactgtattcagatctaggtttgtttaaaggccc--atgtgcc-tttgcttgcaatgggctactc-TGTTTCTgcaagtattgccattcc---cgcttcacagatgaataaaccatggccatgagaagtcaactgttggcccaTATTAGTGA-GTGATGTGTT--GAGC--------- i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4480276 175 + 163208435 gtgttactcatcaagtgactgtattcagatctaggtttgtttaaaggccc--atgtgcc-tttgcttgcaatgggctactc-TGTTTCTGCAAGTATTGCCATTCC---CCCTTCACAGGTGAATAAACCATGGCCATGAGAAGTCAACTGTTGGCCCATATTAGTGA-GTGATGTGTT--GAGC--------- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5712987 175 - 180051392 ATGTTACTCATCAACTGACTGTATTCAGATCTGGGTTTGTTTAAAGGCCC--ACATGCC-TTTGTTTGCAATGGGCTACTC-TGTTTCTgcaagtgttgccattcc---cacttcacagatgagtaaaccatggccatgagaagtcaGCTGTTGGGCCATGTCAGTGA-GTGATGCGTT--GAGC--------- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5904780 175 - 181584905 ATGTTACTCATCAACTGACTGTATTCAGATCTGGGTTTGTTTAAAGGCCC--ACATGCC-TTTGTTTGCAATGGGCTACTC-TGTTTCTgcaagtgttgccattcc---cacttcacagatgagtaaaccatggccatgagaagtcaGCTGTTGGGCCATGTCAGTGA-GTGATGCGTT--GAGC--------- i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 933857 175 - 16193990 gtgttactcatcaactgactgtattcagatctgggtttgtttaaaggccc--acgtgcc-tttgtttgcaatgggctactc-tgtttctgcaagtgttgccattcc---cacttcacagatgagtaaaccatggccatgagaagtcagctgttgggccatgtcagtga-gtggTGCGTT--GAGC--------- i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1750874 175 - 21434487 GTGTTACTCATCAACTGACTGTATTCAGATCTGGGTTTGTTTAAAGGCCC--ACGTGCC-TTTGTTTGCAATGGGCTACTC-TGTTTCTgcaagtgttgccattcc---cacttcacagatgagtaaaccatggccatgagaagtcaGCTGTTGGGCCATGTCAGTGA-GTGATGTGTT--GAGC--------- i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4719745 175 - 82825804 GTGTTACTCATCAACTGACTGTATTCAGATCTAGGTTTGTTTAAAGGCCC--ACATGCC-TTTGTTTGCAATGGGCTACTC-TGTTTCTgcaagtgttgccgttcc---cacttcacagatgagtaaaccatggccgtgagaagtcaGCTGTTGGGCCATGTCAGTGA-GTGATGTGTT--GAGC--------- i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 215076 175 + 2521317 GTGTTACTCATCAACTGACTGTATTCAGATCTGGGTTTGTTTAAAGGCCC--ACGTGCC-TTTGTTTGCAATGGGCTACTC-TGTTTCTgcaagtgttgccattcc---cacttcacagatgagtaaaccatggccatgagaagtcaGCTGTTGGGCCATGTCAGTGA-GTGATGTGTT--GAGC--------- i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1706153 177 - 2415367 GTGTTACTCATCAACTGACTGTATTCAGATCTAGGTTTGTTTGAAGGCCC--ACGTGCC-TTTATTTGCAATGGGCTACTC-TGTTTCTgcaagtgttgccattcc---cacttcacagatgagtaaaccatggccgtgagaagtcaGCTGTTGGGCCATGTCAGTGA-GTGATGCGTTGAGAGC--------- i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142778289 155 - 204313951 GTGTTACTCATCCAGTGAC----TTCAGATCTAGGG------------------GAGAC-TTCGCTTGCTCTGGGCTCCTC-TGTTTCGGTAAATATTACCATTCC---CCCTTCACAGAGGCGTAAACCATGACCATGAGAAGTGCACTGTTGGCCCAGGTTGGTGA-GGGATCTGTT--GAGC--------- i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2176045 155 + 10068113 GTGTTACTCATTTAGTGAC----TTCAGATCTAGGG------------------GAGCC-TTTGCTTGCAATGGGCTACTC-TGTTTCGGCAAGTATGACCATTTC---CACTTCACAGAGGCGTAAACCACGGCCAAGAGAAGTCCACTGCTGGCCCAGGTTAGTGA-GTGATCTGTT--GAGC--------- i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 31806 152 - 709587 -TGTTACTCATCTAGTGAC----TTCAGATCTAGGG------------------GAGCC-TTTGCTTGCAATGGGCTACTC---TTTCAGCAAGTATTACCATTTC---CACTTCACAGAGGTGTAAACCATGGCCATGAGAAGTCCACTGTTGGCCCAGGTTAGTGA-GTGATCTGTC--GAGC--------- i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1130270 155 - 2246441 GTGTTACTCATCTAGTGAC----TTCAGATCTAGGG------------------GAGCC-TTCGCTTGCAATGGGATACTC-TGTTTCggcaagtattaccattcc---cacttcacagaggcataaaccatggccatgagaagtccactgttggcccaggttaGTCA-GTGATCTGTT--GAGC--------- i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 703934 175 - 940639 GTATTACTCATCAAGTGACCATATTCAGATTGAGCTTTGCTTGAAGGCCT--GTGTGCC-ATCTACTGCAATGGGCTACTC-TGTTTCTGGAAATATTGCTGTTTT---CACTTCAGAGATGAGTAAACCTTATCTCTGAGAAGTCTACTATTAGCCCAGGTTAGTGA-GTGATCCATT--GATC--------- i proCoq1.NW_012152163v1 I 63 I 26 s otoGar3.GL873522 1204164 172 + 48283576 GTGTTACTCATCAAGTGACCATATTCAGACTGAGGTTTGCTTGAAGGCCT--GTGTAGT-TTGTATTGCAGTGGGCTACTC-TGTTTCTGCCAACGTTGCCATTCC---CACTTCACAGATGAGTAAACCTTGACTCT---AAGTCCACTGTTGGTCTAGGTTAGTGA-GTGATTCATT--GAGC--------- i otoGar3.GL873522 C 0 I 24 s mm10.chr13 65963935 144 - 120421639 -TACTAGTCATCATGTGATCTTGTTCAGATCTAGGTTGACTAGAAGGCCTAGATGAGCC-TTA--------------ACTT-TGTGTCTGCAG--ATTGCCAGTCATCGTGTTTCACAGG-AAGGAAGCCGTGG-------------------GTCCCCGGTTAGTGAGGTGATCTGTT--GATC--------- i mm10.chr13 C 0 C 0 s canFam3.chr4 37152487 154 + 88276631 -----actcattaagtgacAGTATTTAAATCTAGGTTTGCTTAGAGGTCC--ACATGCC-TTCTATTGACAATGGCTATTC-TTATTTCAC-----TTGCCattcc---cattttacagatgagtaaaccttggctctaagaagt-----------CCAACTTAATGA-GTGATTGGTT--GAGT--------- i canFam3.chr4 C 0 I 9 s dasNov3.JH562710 222404 186 - 960158 ATGATACTCTATAAGTGACAACATTTAGGTCTAGTTTCTCTTCAAGGCCC--ATCCGCCATTTATTAACAATGGGCTACTTTTGTCTCCAcaagtactgccattct---gattttacagatgagtaaactcttggtctgagaagttgcctgctgctgcagattagtga-gtgatcattg--gatccaggttttc i dasNov3.JH562710 C 0 C 0 a score=163008.000000 s hg38.chr5_KI270795v1_alt 19758 16 + 131892 AGGTGCAGTAGTGTGC-------- s panTro5.chr5 5268213 16 - 181907262 AGGTGCAGTAGTGTGC-------- i panTro5.chr5 C 0 C 0 s panPan2.chr5 5530695 16 - 183735486 AGGTGCAGTAGTGTGC-------- i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1628417 16 + 3967317 AGGTGCAGTAGTGTGC-------- i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4480451 16 + 163208435 AGGTGCAGTAGTGTGC-------- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5713162 16 - 180051392 AGGTGCAGTAGTGTGC-------- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5904955 16 - 181584905 AGGTGCAGTAGTGTGC-------- i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 934032 16 - 16193990 AGGTGCAGTAGTGTGC-------- i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1751049 16 - 21434487 AGGTGCAGTAGTGTGC-------- i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4719920 16 - 82825804 AGGTGCAGTAGTGTGC-------- i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 215251 16 + 2521317 AGGTGCAGTAGTGTGC-------- i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1706330 16 - 2415367 AGGTGCAGTCGTGTGC-------- i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142778444 10 - 204313951 AGGTGCAGTA-------------- i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2176200 16 + 10068113 AGGTGCAGTCGTGTGC-------- i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 31958 16 - 709587 AGGTGCAGTAGTGTGC-------- i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1130425 16 - 2246441 AGGTGCAGTAGTGTGC-------- i aotNan1.NW_018501968v1 C 0 T 3837 s mm10.chr13 65964079 12 - 120421639 ----TCAGTCTTGGGC-------- i mm10.chr13 C 0 C 0 s canFam3.chr4 37152650 9 + 88276631 AGGTTCAGT--------------- i canFam3.chr4 I 9 C 0 s dasNov3.JH562710 222590 24 - 960158 aggctcagtagtcttttctccagc i dasNov3.JH562710 C 0 C 0 e otoGar3.GL873522 1204336 24 + 48283576 I e proCoq1.NW_012152163v1 704109 26 - 940639 I a score=164645.000000 s hg38.chr5_KI270795v1_alt 19774 21 + 131892 -ACAGTAGTGTTTGCAGTAGCG s panTro5.chr5 5268229 21 - 181907262 -ACAGTAGTGTTTGCAGTAGCG i panTro5.chr5 C 0 C 0 s panPan2.chr5 5530711 21 - 183735486 -ACAGTAGTGTTTGCAGTAGCG i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1628433 21 + 3967317 -ACAGTAGTGTTTGCAGTAGTG i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4480467 21 + 163208435 -ACAGTAGTGTTTGCAGTAGCG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5713178 21 - 180051392 -ACAGTAGTGTTTGCAGTAGCG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5904971 21 - 181584905 -ACAGTAGTGTTTGCAGTAGCG i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 934048 21 - 16193990 -ACAGTAGTGTTTGCAGTAGCG i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1751065 21 - 21434487 -ACAGTAGTGTTTCCAGTAGCG i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4719936 21 - 82825804 -ACAGTAGTGTTTCCAATAGCG i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 215267 21 + 2521317 -ACAGTAGTGTTTCCAGTAGCG i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1706346 21 - 2415367 -ACAGTAGTGTTTGCAATAGCG i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142778454 3 - 204313951 -------------------GTG i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2176216 20 + 10068113 -ACAGTAGTGTTTGCGGT-GTG i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 31974 21 - 709587 -ACAGTAGTGTTTGCAGTAGTG i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1126604 21 - 2246441 -ACAGTAGTGTTTGCAGTAGTG i aotNan1.NW_018501968v1 T 3837 C 0 s mm10.chr13 65964091 20 - 120421639 -TTAGGAATGTTTCTGTTGGC- i mm10.chr13 C 0 C 0 s canFam3.chr4 37152659 20 + 88276631 --CAGTACTGTTTCCTTCAGCA i canFam3.chr4 C 0 I 16 s dasNov3.JH562710 222614 19 - 960158 cccagaatttctgccactg--- i dasNov3.JH562710 C 0 C 0 e otoGar3.GL873522 1204336 24 + 48283576 I e proCoq1.NW_012152163v1 704109 26 - 940639 I a score=25814.000000 s hg38.chr5_KI270795v1_alt 19795 2 + 131892 TT s panTro5.chr5 5268250 2 - 181907262 TT i panTro5.chr5 C 0 C 0 s panPan2.chr5 5530732 2 - 183735486 TT i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1628454 2 + 3967317 TT i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4480488 2 + 163208435 TT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5713199 2 - 180051392 TT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5904992 2 - 181584905 TT i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 934069 2 - 16193990 TT i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1751086 2 - 21434487 TT i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4719957 2 - 82825804 TT i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 215288 2 + 2521317 TT i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1706367 2 - 2415367 TT i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142778457 2 - 204313951 TT i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2176236 2 + 10068113 TT i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 31995 2 - 709587 TT i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1126625 2 - 2246441 TT i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1204360 2 + 48283576 TC i otoGar3.GL873522 I 24 C 0 s mm10.chr13 65964111 2 - 120421639 TT i mm10.chr13 C 0 C 0 s canFam3.chr4 37152695 2 + 88276631 CC i canFam3.chr4 I 16 C 0 s dasNov3.JH562710 222633 2 - 960158 ct i dasNov3.JH562710 C 0 C 0 e proCoq1.NW_012152163v1 704109 26 - 940639 I a score=2358352.000000 s hg38.chr5_KI270795v1_alt 19797 176 + 131892 TCTCACCTTCCCTGATGAAGGGTCTTTTCAGTTGCAAACCAACTTGCCACCTCA--GCGGCAGAAGTTGAGTGTTGTTCGTGTCACCGTGAGTAAA-TTTGATGCATTATTTCTTGTTTTTG-CAACCATCTGTCATTCCTGTGGTCTC-TGCCATGTT----TATATATTCCCTCTAGAACTGG s panTro5.chr5 5268252 177 - 181907262 TCTCACCTTCCCTGATGAAGGGTCTTTTCAGTTGCAAACCAACTTGCCACCTTA--GCGGCAGAAGTTGAGTGTTGTTCGTGTCACTGTGAGTAAATTTTGATGCATTATTTCTTGTTTTTG-CAACCATCTGTCATTCCTGTGGTTTC-TGCCATGTT----TATATATTCCCTCTAGAACTGG i panTro5.chr5 C 0 C 0 s panPan2.chr5 5530734 177 - 183735486 TCTCACCTTCCCTGATGAAGGGTCTTTTCAGTTGCAAACCAACTTGCCACCTTA--GCGGCAGAAGTTGAGTGTTGTTCGTGTCACTGTGAGTAAATTTTGATGCATTATTTCTTGTTTTTG-CAACCATCTGTCATTCCTGTGGTCTC-TGCCATGTT----TATATATTCCCTCTAGAACTGG i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1628456 177 + 3967317 TCTCACCTTCCCTGATGAAGGGTCTTTTCAGTTGCAAACCAACTTGCCACCTCA--GCGGCAGAAGTTGAGTGTTGTTCGTGTCACTGTGAGTAAATTTTGATGCATTATTTCTTGTTTTTG-CAACCATCTGTCATTCCTGTGGTCTC-TGCCATGTT----TATATATTCCCTCTAGAACTGG i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4480490 177 + 163208435 TCTCACCTTCCCTGATGAAGGGTCTTTTCAGTTGCAAACCAACTTGCCACCTCA--GCAGCAGAAGTTGAGTGTTGTTCGTGTCACTGTGAGTAAATTTTGATGCATTATTTCTTATTTTTG-CAACCATCTGTCATTCCTGTGGTCTC-TGCCATGTT----TATATATTCCCTCTAGAACTGG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5713201 177 - 180051392 TCTCACCTTCCCTGGTGAAGGGTCTTTTTAGTTGCAAACCAACTTGCCACCTCA--GCGGCAGAAGTGGAATGTTGTTCATGTCACTGTGAGTAAATTTTGATGCATTATTTCTTGTTTTTG-CAACCATCTGTCATTCCTGTGGTCTC-TGCCATGTT----TATATATTCCCTCTAGAACTGG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5904994 177 - 181584905 TCTCACCTTCCCTGGTGAAGGGTCTTTTTAGTTGCAAACCAACTTGCCACCTCA--GCGGCAGAAGTGGAATGTTGTTCATGTCACTGTGAGTAAATTTTGATGCATTATTTCTTGTTTTTG-CAACCATCTGTCATTCCTGTGGTCTC-TGCCATGTT----TATATATTCCCTCTAGAACTGG i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 934071 177 - 16193990 TCTCACCTTCCCTGGTGAAGGGTCTTTTTAGTTGCAAACCAACTTGCCACCTCA--GCGGCAGAAGTGGAATGTTGTTCATGTCACTGTGAGTAAATTTTGATGCATTATTTCTTGTTTTTG-CAACCATCTGTCATTCCTGTGGTCTC-TGCCATGTT----TATATATTCCCTCTAGAACTGG i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1751088 177 - 21434487 TCTCACCTTCCCTGGTGAAGGGTCTTTTTAGTTGCAACCCAACTTGCCACCTCA--GCGGCAGAAGTTGAATGTTGTTCATGTCACTGTGAGTAAATTTTGATGCATTATTTCTTGTTTTTG-CAACCATCTGTCATTCCTGTGGTCTC-TGCCATGTT----TATATATTCCCTCTAGAACTGG i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4719959 177 - 82825804 TCTCACCTTCCCTGGTGAAGGGTCTTTTTAGTTGCAAACCAACTTGCCACCTCA--GCGGCAGAAGTTGAATGTTGTTCATGTCACTCTGAGTAAATTTTGATGCATTATTTCTTGTTTTTG-CAACCATCCGTCATTCCTGTGGTCTC-TGCCATGTT----TATATATTCCCTCTAGAACTGG i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 215290 177 + 2521317 TCTCACCTTCCCTGGTGAAGGGTCTTTTTAGTTGCAACCCAACTTGCCACCTCA--GCGGCAGAAGTTGAATGTTGTTCATGTCACTGTGAGTAAATTTTGATGCATTATTTCTTGTTTTTG-CAACCATCTGTCATTCCTGTGGTCTC-TGCCATGTT----TATATATTCCCTCTAGAACTGG i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1706369 177 - 2415367 TCTTACCTTCCCTGGTGAAGGGTCTTTTCAGTTGCAAACCAACTTGCCACCTCA--GCGGCAGAAGCTGGGTGTTGTTCATGTCACTGTGAGTAAATTTTGATGCATTATTTCTTGTTTTTG-CAACCATCTGTCATTCCTGTGGTCTC-TGCCATGTT----TATGTATTCCCTCTAGAACTGG i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142778459 176 - 204313951 TCTCACCTTCCCTGATGAAGGGTCTTTGCAGGTGCAAACCAACTTGCCACCTCA--TTGGCAGAAGTTGAGTGCTGTT-ATGTCACTGTGAGTAAATTTTGATGCATTATTTCTTGTTTGTG-CAACCATCTGTCATTCCTTTGGTCTC-TGCCATGTT----TAAATACTCCCTCTAGAACTGG i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2176238 173 + 10068113 TCTCACCTTCCCTGATGAAGGGTCTTCGCAGTCGCAAACCAACTTGCCACCTCA--CTGGCAGAAGTTGAGTGGTGTTCATGTCACTGTGAGTAAATTTTGATGCATTATTTGTTGTTTGTG-CAACCATCTGTCATTCCTGTGGTCTC-TGCCATGT--------GTACTCCCTCTAGAACTGG i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 31997 177 - 709587 TCTCACCTTCCCTGATGAAGGGTCTTTGCAGTTGCAAACCAACTTGCCACCTCA--TTGGCAGAAGTTGAATGTTGTTAATGTCACTGTGAGTAAATTTTGATGCATTATTTCTTGTTTCTG-CAACCATCTGTCATTCCTGTGGTCTC-TGCCATGTT----TAAATACTCCCTCTAGAACTGG i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1126627 177 - 2246441 TCTCACCTTCCCTGATGAAGGGTCTTTGCAATTGCAAACCAACTTGCCACCTCA--TTGGCAGAAGTTGAGTGTTGTTCATGTCACTATGAGTAAATTTTGATGCATTATTTCTTGTTTGTG-CAACCATCTGTCATTCCTATGGTCTC-TGCCATGTT----TAAATACTCCCTCTAGAACTGG i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 704135 179 - 940639 TCTCACCTACCCTG-ATAATGGTCTTTTCAGTTGCAAACCAGCTTACTGCATCATTATGTC-GGAGTTCAGTATTGTTCATGTCACTG-GAGTAAACTCTGATGCATTGTTTCTTGTTTTTG-CAATGATCTGTCATTCCTGTGGTCTCTTTCTGTGTT--AATATATAGTCCCCTTGGCATTGG i proCoq1.NW_012152163v1 I 26 C 0 s otoGar3.GL873522 1204362 173 + 48283576 TCTCACTT---CTGCAGAACGGTCTTTTCAG-TACATACTGACTTGCTGTGTCATTGTGTCAGAAGGTCAGTATTGTTCATGCCACTG-AAGTAAATTTTGATG---TGTTCTTTCTTTTTG-CAATGATCTTTCATTCCTGTAATCTC-TTCTGTGTT--AATATGTATTTCCCTGGGCAGTGG i otoGar3.GL873522 C 0 C 0 s mm10.chr13 65964113 118 - 120421639 ------------------------------------------TCTAACAGCCCA--TTGTTTTAAGTCCAGTGGTGTACCTGTCACCG-AAGTACACTTGGACACATTGTTCTTGGTTTTTA-------------ATTCCTGTGGTCAC-TACTG--------TACCTGTTTCCCTTAGTGTTGG i mm10.chr13 C 0 I 733 s canFam3.chr4 37152697 180 + 88276631 TGTGACCTTCCCTGAAGATGGTTCTTTTTAGTTGTAAACCAGCATGCTACCTCATTATGTCAGAAGTTCAA---TGTTCGTGTCACTAGGAGCAAACTGTGGTACACTGATCTTTATTTTTA-TGGTTGTTTGTCATTCCTGTGGATGC-TGCTATGTTTCTCTATATAGCCCCTTTAACATTGG i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 222635 180 - 960158 tctcacCTTCCCTGAAGAATGGTCTTTTCAGTTACAAACCGACTTATCACCTCCTTATGTCAGCAGGTCACTGTTGTTCCTGTCACTGAGAATAAACTTGGACATGTGCTTTCTTGCTTTGGGTGTTTATCTGTTAT---TATGATTGC-TGCTATGTTTCTCTATATACTCCCT-TAGAACTGG i dasNov3.JH562710 C 0 C 0 a score=5873419.000000 s hg38.chr5_KI270795v1_alt 19973 463 + 131892 TAccagatgctgagggtttgggctacatcttaatatttgattgattccctcttcc---atccttgtgga-tttttttctcctctgggtttatgtaaattagtgatccacacgacctgtcacttaaacaagaggaaa--ctt--tgcatttaactggtgggacacttgtagcaacaggagaacacacatccatgagc-aaggagtcccagtgtgtgtgagtttttgcagactctcaag---gtcttgatgacaccatctctGTGCCTTGGCTTTGAAGTACTGGAGG-AGT-------TCAAAGGT-GGGTCCATCCTGGGGAAATGA---CA--TGTCTCAGACCCGGGGCCC--ctttggtttgagtgcattttctagt-tctgcagagctggaaggatgccattcagagtcacagctggccatttattatttggtctgtcgaggcattttctgcagttgctactacacacatcagcaagtcaggagtgag s panTro5.chr5 5268429 465 - 181907262 TAccagatgctgagggtttgggctacatcttaatatctgattgattccctcttcc---atccttgtgga-tttttttctcctctgggtttatgtaaattagtgatccacacgacctgtcacttaaacaagaggaaa--ctt--tgcatttaactggtgggacacttgtagcaacaggaaaacacacatccatgagc-aaagagtcccagtgtgtgtgagtttttgcagactgtcaag---gtcttgatgacaccatctctGTGCCTTGGCTTTGAAGTACTGGAGG-AGT-------TCAAAGGT-GGGCCCATCCTGGGGAAATGA---CATGTGTCTCAGACCCGGGGCCC--ctttggtttgagtgcattttctagt-tctgcagagctggaaggatgccattcagagtcacagctggccatttattatttggtctgtcgaggcattttctgcagttgctactacacacatcagcaagtcaggagtgag i panTro5.chr5 C 0 C 0 s panPan2.chr5 5530911 453 - 183735486 TAccagatgctgagggtttgggctacatcttaatatctgattgattccctcttcc---atccttgtgga-tttttttctcctctgggtttatgtaaattagtgatccacacgacctgtcacttaaacaagaggaaa--ctt--tgcatttaactggtgggacacttgtagcaacaggaaaacacacatccatgagc-aaagagtcccagtgtgtgtgagtttttgcagactgtcaag---gtcttgATGACA------------CTTGGCTTTGAAGTACTGGAGG-AGT-------TCAAAGGT-GGGCCCATCCTGGGGAAATGA---CATGTGTCTCAGACCCGGGGCCC--ctttggtttgagtgcattttctagt-tctgcagagctggaaggatgccattcagagtcacagctggccatttattatttggtctgtcgaggcattttctgcagttgctactacacacatcagcaagtcaggagtgag i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1628633 464 + 3967317 TAccagatgctgagggtttgggctacatcttaatatttgattgattccctcttcc---atccttgtgga-tttttttctcctctgggtttatgtaaattagtgatccacacga-ctgtcacttaaacaagaggaaa--ctt--tgcatttaactggtgggacacttgtagcaacaggaaaacacacatccatgagc-aaagagtcccagtgtgtgtgagtttttgcagactgtcaag---gtcttgatgacaccatctctGTGCCTTGGCTTTGAAGTACTGGAGG-AGT-------TCAAAGGT-GGGTCCATCCTGGGGAAATGA---CATGTGTCTCAGACCCGGGGCCC--ctttggtttgagtgcattttctagt-tctgcagagctggaaggatgccattcagagtcacagctggccatttattatttggtctgtcgaggcattttctgcagttgctactacacacatcagcaagtcaggagtgag i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4480667 465 + 163208435 TAccagatgctgagggtttgggctacatcttaatatttgattgattccctcttcc---atccttgtgga-tttttttctcctctgggtttatgtaaattagtgatccacacgacctgtcacttaaacaagatgaaa--ctt--tgcatttaattggtgggacacttgtagcaacaggaaaacacacatccatgagt-aaagagtcccagtgtgtgtgagtttttgcagactgtcaag---gtcttgatgacaccatctctGTGCCTTGGCTTTGAAGGACTGGAgg-agt-------tcaaaggt-gggtccatcctggggaaatga---catgtgtctcagacccggggccc--ctttggtttgagtgcattttctagt-tctgcagagctggaaggatgccattcagagtcacagctggccatttattatttggtctgtcgaggcattttctgcagttgctactacacacatcagcaagtcaggagtgag i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5713378 460 - 180051392 AAccagatgttgagggtttgggttacatcttaatatttgattgattccctcttcc---atccttgtgga-tttttttctgctctgggtttatgtaaattactgatccacactgcctgtcacttaaacaagatgaaa--ctt--tgcatttaactagtgggacacttatagcagcaggaaaacacatatccatgagc-aaagagtcccagtgtatgtgagtttttgcagactttcaac---gtct---tgACACCATCTCTGTGCCTTGACTTTGAAGTACTGGAGG-AGT-------TCAAAGGT-GGGTCCATCCTGGGGAAATGA---CATGCATCTCAGACCCGGGGCCC--ctttggtttgagtgcattttctagt-tctgcagagctggaaggatgccgttcagagtcacagctggccatttattatttggtctgtcgaggcattttctgcagtttctgctatacacatcagcaagtc--gggtgag i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5905171 460 - 181584905 AAccagatgttgagggtttgggttacatcttaatatttgattgattccctcttcc---atccttgtgga-tttttttctgctctgggtttatgtaaattactgatccacactgcctgtcacttaaacaagatgaaa--ctt--tgcatttaactagtgggacacttatagcaacaggaaaacacatatccatgagc-aaagagtcccagtgtatgtgagtttttgcagactttcaac---gtct---tgACACCATCTCTGTGCCTTGACTTTGAAGTACTGGAGG-AGT-------TCAAAGGT-GGGTCCATCCTGGGGAAATGA---CATGCATCTCAGACCCGGGGCCC--ctttggtttgagtgcattttctagt-tctgcagagctggaaggatgccgttcagagtcacagctggccatttattatttggtctgtcgaggcattttctgcagtttctgctatacgcatcagcaagtc--gggtgag i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 934248 463 - 16193990 AAccagatgttgagggtttgggttacatcttaatatttgattgattccctcttcc---atccttgtgga-tttttttctgctctgggtttatgtaaattactgatccacactgcctgtcacttaaacaagatgaag--ctt--tgcatttaactagtgggacacttacagcaacaggaaaacacatatccatgagc-aaagagtccccgtgtatgtgagtttttgcagactttcaac---gtcttgatgacaccatctctgttccttgactttgAAGTACTGGAGG-AGT-------TCAAAGGT-GGCTCCATCCTGGGGAAATGA---CATGCATCTCAGACCCGGGGCCC--ctttggtttgagtgcattttctagt-tctgcagagctggaaggatgccgttcagagtcacagctggccatttattatttggtctgtcgaggcattttctgcagtttctgctatacacatcagcaagtc--gggtgag i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1751265 470 - 21434487 AAccagatgttgagggtttgggctacatcttaatatttgattgattccctcttcc---atccttgtgga-tttttttctcctctgtgtttatgtaaattactgatccacactgcctgtcacttaaacaagatgaaa--ctt--tgcatttaactagtgggacacttgtagcaacaagaaaacacacatccatgagc-aaagagtcccagtgtatgtgagtttttgcagactctcaac---gtcttgatgacaccatctctGTGCCTTAACTTTGAAGTACTGGAGG-AGTTCAGTactcaaaggt-gggtccatcctggggaaatga---catgcgtctcagacccgcggccc--ctttggtttgcgtgcattttctagt-tctgcagagctgggaggatgccgttcagagtcacagctggccatttattatttggtctgtggaggcattttctgcagtttctgctgtacacatcagcaagtc--gggtgag i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4720136 462 - 82825804 AAccagatgttgagggtttgggctacatcttaatatttgattgattccctcttct---atccttgtgga-tttttttctcctctgggtttatgtaaattactgatccacactgcctgtcacttaaacaaggtgaaa--ctt--tgcatttaaccagtgggacacttgtagcaacaggaaaacacacatccatgagc-aaagagtcccagtgtgtgtgag-ttttgcagactctcaac---gtcttgatgacaccatctctGTGCCTTGACTTTGAAGTACTGGAGG-AGT-------TCAAAGGT-CGGTCCATCCTGGGGAAATGA---CATGTGTCTCAGACCCGGGGCAC--ctttggtttgagtgcattttctagt-tctgtagagctggaaggatgccgttcggagtcacagctggccatttattatttggtctgtcgaggcattttctgcagtttctgctatacacatcagcaagtc--gggtgag i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 215467 466 + 2521317 AAccagatgttaagggtttgggctacatcttaatatttgattgattccctctttc---atccttgtgga-tttttttctcctctgggtttatgtaaattactgatccacactgcctgtcacttaaacaagatgaaa--ctt--tgcatttaactagtgggacacttgtagcaacaagaaaacacacatccatgagc-aaggagtcccagtgtatgtgagtttttgcagactctcaacttggtcttgatgacaccatctctGTGCCTTAACTTTGAAGTACTGGAgg-agt-------tcaaaggt-gggtccatcctggggaaatga---catgcgtctcagacccgcggccc--ctttggtttgagtgcattttctagt-tctgcagagctggaaggatgccgttcagagtcacagctggccatttattatttggtctgtggaggcattttctgcagtttctgctgtacacatcagcaagtc--gggtgag i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1706546 463 - 2415367 AAGcagatgttgagggtttgggctacatcttaatatttgattgattccctcttcc---atccttgtgga-tttttttctcctctgagtttatgtaaattactgatccacactgcctgtcgcttaaacaagatgaaa--ctt--tgcattgaactagtgggacacttgtagcaacaggaaaacacacatccatgagc-aaagagtcccagtgtgtgtgaggtttt-cagactcgcaac---gtcttgatgacaccatctctgtgcttTGACTTTAAAGTACTGGAGGTTGT-------TCAAAGGT-GGGTCCATCCTGGGGAAATGA---CATGCGTCTCAGACCCAGGGCCC--ctttggtttgagtgcattttctagt-tctgcagagctggaaggatgccattcagagtcacagctggccatttattatttggtctgtcgaggcattttctgctatttctgctatacacatcagcaagtc--gggtgag i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142778635 456 - 204313951 AAccagatgctgagggtttgggctacgtcttgatatttcattgattccctcttcc---atccttgtgga-ttgtattctcctctgggtttatgtaaattagtgatccacactacctgtcacttaaacaagatgaaa--ttt--tgcatttaactagtgggtcacttctagcaacaggaaaacacacatccatgagcaaaagagtcctagtgtgtgtgagtttttgcagacggtcaag---gtcttgatgacaccatctctGTGCCTTGGCTTTGAAGTCCCGGAGA-AGT-------TCAAAGGT-GGGTCCATCCTGAGGAAACGA---CATGTGTCCCAGA-------CCC--ctttggtttgcgtgcattttctagt-tttgcagagctggaaggatgccattcagagtcacagctggccactt---atgtggtgtgtcgaggcattttctgcagttgctgctccacacatcggcaggtcaggagtgag i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2176411 464 + 10068113 AAccagatgctgagggtttgggctatgtcttaatatttgattgattccctcttcc---atccttgtgga-ttttattctcctctgggtttatgtaaattagtcatccacactgcctgtcacttaaacaagatgaaa--ctt--tgcatttaactagtgggacacttctagcaacaggaaaacacacatccatgagcaaaagagtcctagtgtgtgtgagtatttgcagactgtcaag---gtcttgatgacaccatctctGTGCCTTGGCTTTGAAGTACTGGAGA-AGT-------TCAAAGGT-GGGTCCATCCTGAGGAAATGA---CATGTGTCCCAGACCTGGGGCCC--ctttggtttgagtgcattttctagt-tgtgcagagctggaaggatgccattcagagtcacagccggccactta--acgtggtgtgtcgaggcattttctgcggttgctgctccacacatcggcaagtcaggagtgag i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 32174 464 - 709587 AAccagatgctgagggtttgggctatgtcttaatatttgattgattccctcttcc---atcttcatgga-ttttattctcctctgggtttatgtaaattagtgattcacactacgtgtcacttaaacaagatgaaa--ctt--tgcatttaactagtgggacacttctagcaacaggaaaacacacatccatgagcaaaagagtcctagtttgtgtgagtttttgcagactgtcaag---gtcgtgatgacaccatctctGTGCCTTGGCTTTGAAGTACCGGAGA-AGT-------TCAAAGGT-GGGTCCATCCTGAGGAAACGA---CACATgtcccagacctgcggccc--ctttggtttgcgtgcattttccagt-tttgcagagctggaaggatgccattcagagtcacagcaggccacttaatatgtggtgtgtcaaggcattttctgtggttgctgctccacacatccgcaagtc--gagtgag i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1126804 463 - 2246441 AAccagatgctgagggtttgggctacgtcttaatatttgattgattccctcttcc---atcctcatgga-ttttgttctcctctgagtttatgtaaattagtgatccacactacctgtcacttaaacaagatgaaa--ctt--tgcatttaactagtgggatacttctaacaacaggaaaacacacattcatgagcaaaagaatcctagtgtgtgtgagtttttgcagactgtcaag---gtcttgatgacaccatctctgtgccttggctttgAAGTACCGGAGA-AGT-------TCAAAGGT-GGGTCCATCCTGAGGAAAAGA---CATGTGTCCCAGACCTGGGGCCC--ctttggtttgtgtgcattttctagt-tttgcagagctggaaggatgccattcagagtcacagctggccactt---atgtggtgtgtcgaggcattttctgcagttgctgctccacacatcggcaagtcaggagtgag i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 704314 463 - 940639 AGccagatgctaagggtttggggtaggtcttaatatttgttc--cctcctcttct---gtccatgtggattttttttctccttcgggtttatgtaaagtggtgatccacactatctaccagttaaacaagatgaaactttt--ttcatttgactaatggaatgcttgtagcaacaggaaaacac--atctgtgagg-aaagagctccagcttgtggcagtttttgcaggctgtcaag---gtcttgatgacaccGTATCTATGCCTTTGCTTTGATGTCCTGGAGG-AAC-------TC-AAGGT-AGGTCCATTCTG-GAAAATGATGTAAAGTGTCCTAGACCTGGGGCCCttccttagtttgagagcattttgtagt-tccacagagctagaaggatgccattcagagtcacagctggccatttattattct----gtctaggcattttctacggttcctactgcacacactagcaagctagaagtgag i proCoq1.NW_012152163v1 C 0 I 310 s otoGar3.GL873522 1204535 446 + 48283576 AGccggatgctaagggtgtgggttaggtcttaatatttgattgagtccctcttct---gaccatgtgaa-tttttttctcctttgagtttatgtaaagtagtgatccacactgcatgccacttaaacaa-atgaga-tttt--tgcatttaactagtggagtgcttgtagcaaaaggaaaacgc--atctgtgagg-aaagagctccagcttatggcagtgttt-taggctggtaag---gtcttgATGGTACTATATCTGTGCCTTTGGTTTGAAGTCCTGGAGG-AGC-------TCAAAGGT-AGGTCCATTGTA-GAAAATGA------------CAGACCTGGGGCTC--CTTTAGTTTGAGAACATAGTGTGGt-tctgcagagctggaaggatgacattcacagtcatagctggccttttgttactctgtcagtccaggcatttcccatagttgctactgcacacactaggaagccaga------ i otoGar3.GL873522 C 0 C 0 s canFam3.chr4 37152877 444 + 88276631 AATcagataccaa-ggtttagtctagatcttagtatttgatcagttccctctcccttgatccatgtaga-tttttttc--ctctgggtttgtgtaaagtagtgattcactcaacttttcact--------aagaga--tttgctgctttaaactagggggacacttgtagcaacaggaaaacactgat-tgtgggg-aaagagctccagcttgtggcaatgtttgctgactgtcagg---gccttgcTCATAACATTTCTGTGTCTTGATTTCAGAGTCCTGGGGA-GATG------TAGAAGTT-GGGTCCCTTTTGGAGAAATGC-ATAATTTGTCCCAGACCTGATGCCC--CTGTGgtttgagtgagttgtctaat-t---cagagcaggaagggaaccagtcatggtcac--ctagcaattgat------gtcagtacagccatgtaatacagt------tctaaacactagcaagtcagaagtgga i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 222815 434 - 960158 GACTAGAtgctaagggtttagtgtaggtctaaag---tgatcagtt-cttcttcc---aaccatatgga-tttttttcttctctgggtttgtgtaaagtagcagtgcatgccacctattacttaaagaagaagaga--tttgttacttttaactggcagggtacttgtagccacaggaaaacacaga----------aaagaattatagcttgtggcaccctccattggctgacacc---aact-------------tctctgccatagcttcaaagtcctggagg-cac-------tcagaggtcaagtccttgctggggaaatga------gtgtcctagatctgggatc---ctgtggtttgagtgaattttctagtctctccagaactagaatggtgtcattcagagttacactt----atttattaaatggtcaatctaggtatgtgatacaggtgctact-tgaaccctagcaatccggaaagaaa i dasNov3.JH562710 C 0 C 0 e mm10.chr13 65964231 733 - 120421639 I a score=2136539.000000 s hg38.chr5_KI270795v1_alt 20436 201 + 131892 tggggaggtcagctacaagctagattttagttggcagcgagagtctaggatttgctgcACTTGTTCACACACACACTTACTCATCATGTGCCCAAACAGACTGCAGTATCCACATACCAATGACCCACTGTTGTGTTGGCTGGAATGACAAGTCAGACTG----ATAGGTA-GT-GAAGTTTGTAGTATCATCTC-----TTTTGCTGAGAT s panTro5.chr5 5268894 201 - 181907262 tggggaggtcagctacgagctagattttagttggcagggagagtctaggatttgctgcACTTGTTCGCACACACACTTACTCATCATGTGCCCAAACAGACTGCAGTATCCACATACCAATGACCCACTGTTGTGTTGGCTGGAATGACAAGTCAGACTG----ATAGGTA-GT-GAAGTTTGTAGTATCATCTC-----TTTTGCTGAGAT i panTro5.chr5 C 0 C 0 s panPan2.chr5 5531364 201 - 183735486 tggggaggtcagctacgagctagattttagttggcagggagagtctaggatttgctgcACTTGTTCGCACACACACTTACTCATCATGTGCCCAAACAGACTGCAGTATCCACATACCAATGACCCACTGTTGTGTTGGCTGGAATGACAAGTCAGACTG----ATAGGTA-GT-GAAGTTTGTAGTATCATCTC-----TTTTGCTGAGAT i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1629097 200 + 3967317 tggggaggtcagctacaagctagattttagttgtcagggagagtctaggatttgctgcACTTGTTCACACACACACTTACTCATCATGTGCCCAAACAGACTGCAGTATCGACATACCAATGACCCACTGTTGTGTTGGCTGGAATGACAAGTCAGACTG----ATAGGTA-GT-GAAGTTTGTAGTATCATCTC------TTTGCTGAGAT i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4481132 201 + 163208435 tggggaggtcagctatgagctagattttagttggcagggagagtctaggatttgctCCACTTGTTCACACACACACTTACTCATCATGTGCCCAAACGGACTGCAGTATCAGCATGCCAATGACCCACTGTTGTGTTGGCTGGAATGACAAGTCAGACTG----ATAGGTA-GT-GAAGTTTGTAGTATCATCTC-----TTTTGCTGAGAT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5713838 201 - 180051392 tggggaggtcagctgtgagctagattttagttggcagggcaagtctaggattcgctCCACTTGTTCACACACACACTTACTCATCACGTGCTCAAACAGACTGCAGTATCCACATACCAATGACCCACTGCTGTGTTGGCTGGAATGACAAGTCAGACTG----ATAGGTA-GT-TAAGTTTACAGTATCATCTC-----TTTTGCTGAGAT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5905631 201 - 181584905 tggggaggtcagctgtgagctagattttagttggcagggcaagtctaggattTGTTCCACTTGTTCACACACACACTTACTCATCACGTGCTCAAACAGACTGCAGTATCCACATACCAATGACCCACTGCTGTGTTGGCTGGAATGACAAGTCAGACTG----ATAGGTA-GT-TAAGTTTACAGTATCATCTC-----TTTTGCTGAGAT i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 934711 201 - 16193990 tggggaggtcagctgtgagctagattttagttggcagggcaagtctaggattcgctCCACTTGTTCACACACACACTTACTCATCACGTGCTCAAACAGACTGCAGTATCCACATACCAATGACCCACTGCTGTGTTGGCTGGAATGACAAGTCAGACTG----ATAGGTA-GT-TAAGTTTACAGTATCATCTC-----TTTTGCTGAGAT i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1751735 201 - 21434487 tggggaggtcagctgtgagctagattttagttggcagggcaagtctaggattcgctCCACTTGTTCACACACACACTTACTCATCACGTGCTCAAACAGACTGCAGTATCCACATACCAATGACCCACTGCTGTGTTGGCTGGAATGACAAGTCAGACTG----ATAGGTA-GT-TAAGTTTACAGTATCATCTT-----TTTTGCTGAGAT i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4720598 197 - 82825804 tagggaggtcagctgtgagctagattttagttggcagggcaagtctaggattcgctCCACTTGTTCACACACAC----ACTCATCACGTGCTCAGACAGACTGCAGTATCCACATACCAATGACCCACTGCTGTGTTGGCTGGAATGACAAGTCAGACTG----ATAGGTA-GT-TAAGTTTACAGTATCATCTC-----TTTTGCTGAGAT i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 215933 201 + 2521317 tggggaggtcaactgtgagctagatttgggttggcagggcaagtctaggattcgctCCACTTGTTCACACACACACTTACTCATCACGTGCTCAAACAGACTGCAGTATCCACATACCAATGACCCACTGCTGTGTTGGCTGGAATGACAAGTCAGACTG----ATAGGTA-GT-TAAGTTTACAGTATCATCTT-----TTTTGCTGAGAT i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1707009 197 - 2415367 tggggaggtcagctatgagctagattttagttggcagggcaagtctaggatttgctCCACTTGTTCACACACACACTTACTCATCACGTGCT----CAGACTGCAGTATCCACATACCAATGTCCCACTGCTGTGTTGGCTGGAATGACAGGTCAGACTG----ATAGGTA-GT-TAAGTGTACAATATCATCTC-----TTTTGCTGAGAT i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142779091 201 - 204313951 tcgggaggttggctatgggttagattttagctggcagggaaagtctaagatttgctCCACTTGTTCACACACACACTTACTTATCATGGGCCCAAACAGACTGCAATATCAACATACCAATGACCCATTGCTGTGTTGGCTGGAACGACAAATCAGACTG----ATAGGTA-GT-TAAGTTTATAGTATCATCTC-----TTTTGCTGAGTT i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2176875 201 + 10068113 tcgggaggttggctatgggctagattttagttggcagggaaagtctaagattTGTTCCGCTTGTTCACACACACACTTATTCATCGTGGGCCCAAACAGACTGCAATATCAACATACCAGTGACCCATTGTTGGGTTGGCTGGAACGACAAATCAGATTG----ATAGGTA-GT-TAAGTTTATAGTATCATCTC-----TTTTGCTGAGTT i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 32638 200 - 709587 ctggg-ggttggctatgggctagattttagttggcagggaaagtctaagatttgctgcACTTGTTCACACACACACTTATTCATCATGGGCCCAAACAGACTGCAATATCAACATACCAGTGACCCATTGTTGTGTTGGCTGGAACGACAAATTAGACTG----ATAGGTA-GT-TAAGTTTATAGTATCATCTC-----TTCTGCTGAGTT i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1127267 201 - 2246441 ttgggaggttggctatgggctagattttagttggcagggaaagtctaagattTGTTCCACTTGTTCACACACACACTTATTCATCATGGGCCCAAACAGACTGCAATATCAACGTACCAATGACCCATTGCTGTGTTGGCTGGAACGACAAATCAGACTG----ATAGGTA-GT-TAAGTTTATAGTATCATCTC-----TTTTGCTGAGTT i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1204981 136 + 48283576 --------------gcaagcttcattttagttgttagggaaagtttgggatttgct---------------------------------------------------------gtaccaatgacccattgccatgttgcttggaattacaaatcaggcTA----AAAAATG-CTAGAAGATTATAGTATTAATACTGTGTTTTTGCTGAGAT i otoGar3.GL873522 C 0 C 0 s canFam3.chr4 37153321 145 + 88276631 tgatgagttctgctctgagttaggctatagttggtaaagaaagtttgggatttgct---------------------------------------------------------atgccaatgacccattgctatgtagacttgagttacaagtaatgctgagaaatagata-gt-taagatTATAGTAT---ATT-----TTGTGCTACGAT i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 223249 129 - 960158 tggtgaggtcagctatgggctagactt---------------------AATCTTCT---------------------------------------------------------GTGCCCATGTCCCATTGCTGTGTTCTCTAGATAAATAAGCTGGCCTG----GAAAATAGGT-AAAGATAATAGTATCATCTCTTGTCTTTTGCTGAGAT i dasNov3.JH562710 C 0 C 0 e mm10.chr13 65964231 733 - 120421639 I e proCoq1.NW_012152163v1 704777 310 - 940639 I a score=1673012.000000 s hg38.chr5_KI270795v1_alt 20637 154 + 131892 CCTGGTATTTGGATGGCGTGAGAT-C----CAGAGTAGG---ATGAGCCATGCCACATGGGAAG--CTTG--TGA------A------GTGTATGT-----GCCAT----GTTGTTCCCCACACCTTAACCTGTGTGGGTGGGAGGCTGAGC----AGCTGGAGTCCTGGGAGAGGGTCCTGTGTGGGGAT-- s panTro5.chr5 5269095 154 - 181907262 CCTGGTATTTGGATGGCGTGAGAT-C----CAGAGTAGG---ATGAGCCATACCACATGGGAAG--CTTG--TGA------A------GTGTATGT-----GCCAT----GTTGTTCCCCACACCTTAACCTGTGTGGGTGGGAGGCTGAGC----AGCTGGAGTCCTGGGAGAGGGTCCTGTGTGGGGAT-- i panTro5.chr5 C 0 C 0 s panPan2.chr5 5531565 154 - 183735486 CCTGGTATTTGGATGGCGTGAGAT-C----CAGAGTAGG---ATGAGCCATACCACATGGGAAG--CTTG--TGA------A------GTGTATGT-----GCCAT----GTTGTTCCCCACACCTTAACCTGTGTGGGTGGGAGGCTGAGC----AGCTGGAGTCCTGGGAGAGGGTCCTGTGTGGGGAT-- i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1629297 154 + 3967317 CCTGGTATTTGGATGGCGTGAGAT-C----CAGAGTAGG---ATGAGCCATGCCACATGGGAAG--CTTG--TGA------A------GTGTATGT-----GCCAT----GTTGTTCCCCACACCTTAACCTGTGTGGGTGGGAGGCTGAGC----AGCTGGAGTCCTGGGAGAGGGTCCTGTGTGGGGAT-- i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4481333 154 + 163208435 CCTGGTATTTGGATGGCGTGAGAT-C----CAGAGTAGG---ATGAGCCATGCCACATGGGAAG--CTTG--TGA------A------GTGTATGT-----GCCAT----GTTGTTCCCCACACCTTAACCTGTGTGGGTGGGAGGCTGACC----AGCTAGAGTCCTGGGAGAGGATCCTGTGTGGGGAT-- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5714039 154 - 180051392 CCAGATATTTGGATGGCATGAGAT-A----CAGAGTAGG---ATGAGCCACACCACATGGGAAG--CTTG--TGA------A------GTGTATGT-----GCCTT----GTTGTTCCCCACACCTTAACCTGTGTGGGTGGGAGGCTAAGC----AGCTGGAGTCCTGGGAGAGGGCCCTGTGTGGGGAT-- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5905832 154 - 181584905 CCAGATATTTGGATGGCATGAGAT-A----CAGAGTAGG---ATGAGCCACACCACATGGGAAG--CTTG--TGA------A------GTGTATGT-----GCCTT----GTTGTTCCCCACACCTTAACCTGTGTGGGTGGGAGGCTAAGC----AGCTGGAGTCCTGGGAGAGGGCCCTGTGTGGGGAT-- i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 934912 154 - 16193990 CCAGATATTTGGATGGCATGAGAT-A----CAGAGTAGG---ATGAGCCACACCACATGGGAAG--CTTG--TGA------A------GTGTATGT-----GCCTT----GTTGTTCCCCACACCTTAACCTGTGTGGGTGGGAGGCTAAGC----AGCTGGAGTCCTGGGAGAGGGCCCCGTGTGGGGAT-- i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1751936 154 - 21434487 CCAGATATTTGGATGGCGTGAGAT-A----CAGAGTAGG---ATGAGCCACACCACATGGGAAG--CTTG--TGA------A------GTGTATGT-----GCCTT----GTTGTTCCCCACACCTTAACCTGTGTGGGTGGGAGGCTAAGC----AACTGGAGTCCTGGGAGAGGGCCCTGTGTGGGGAT-- i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4720795 154 - 82825804 CCAGATATTTGGATGGCGTGAGAT-A----CAGAGTCGG---ATGAGCCACGCCACATGGGAAG--CTTG--TGA------A------GTGTATGT-----GCCTT----GTTGTTCCCCACACCTTAACCTGTGTGGGTGGGAGGCTAAGC----AGCTGGTGTCCTGGGAGAGGGCCCTGTGTGGGGAT-- i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 216134 154 + 2521317 CCAGATATTTGGATGGCGTGAGAT-A----CAGAGTAGG---ATGAGCCACACCACATGGGAAG--CTTG--TGA------A------GTGTATGT-----GCCTT----GTTGTTCCCCACACCTTAACCTGTGTGGGTGGGAGGCTAAGC----AACTGGAGTCCTGGGAGAGGGCCCTGTGTGGGGAT-- i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1707206 154 - 2415367 CCAGATATTTGGATGGCGTGAGAT-A----CAGAGTAGG---ATGAGCCATGCCACATGGGAAG--CTTG--TGA------A------GTGTATGT-----GCCTT----GTTGTTCCCCATACCTTAACCTGTGTGGGTGGGAGGCTAAGC----AGCTGGAGTCCTGGGAGAGGGCCCTGTGTGGGGAT-- i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142779292 151 - 204313951 CCTGATATCTGGAAGGTGTGAGAT-C----CAGAGTAGG---ATGAGCCATGCCAAATGGGAAG--CTTG--TGA------G------GTGTATGT-----GCC-------TTGTTCTCCCCACCTTAACCTGTGTGGGTGGGAGGCTGAGC----AACTGGAGTCCTGGGAGAGGGCCCTGAGTGGGGTT-- i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2177076 150 + 10068113 CCTGATACCTGGATGGTGTGAGAT-C----CAGAGTAGG---ATGAGCCATGCCAAATGGGAAG--CTTG--TGA------G------GTGTATGT-----GCC-------TTCTTC-CCCCACCTTAACCTGTGTGGGTGGGAGGCTGAGC----CGCTGGAGTCCTGGGAGAGGGCCCTGAGTGGGGTT-- i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 32838 151 - 709587 CCTGATAGCTGGATGGTGTGAGAT-C----CAGAGTAGG---ATGAGCCATGCCAAATGGGAAG--CTTG--TGA------G------GTGTATGT-----GTC-------TTGTTCCCCCCACCTTAACCTGTGTGGGTGGGAGGCTGAGC----ATCTGGAGTCCTGGGAGAGGGCCCTGAGTGGGATT-- i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1127468 151 - 2246441 CCTGATATCTGGATGGTGTGAGAT-C----CAGAGTAGG---ATGAGCCATGCCAAATGGGAAG--CTTG--TGA------G------GTGTATGT-----GCC-------TTGTTCCCCCCACCTTAACTTGTGTGGGTGGGAGGCTGAGC----AGCTGGAGTCCTGGGAGAGGGCCCTGAGTGGGGTT-- i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1205117 159 + 48283576 TCTGGTATCTCTGTGGGATGAAGT-C----TAG-GTAGG---GTGAG-TATGCCAAATGTTAAG--CTTG--TGAGCAATGG------ATGGGTGT-----GTCTTGTGAGTTGTACCCC-CACC-TAACCTGCATGGGC-AGAGGCTGTGT----AGCTGGGGTCTTGGTGAAGGGCTATGTGTGGGGAT-- i otoGar3.GL873522 C 0 I 1 s mm10.chr13 65964964 128 - 120421639 CCCGGTACTGTGATGGCATGAGAT---------------------------GTCACATGGTAAG--ATTTCCTGA------G------GTTTGTGTGAGGAGCC------TTTGTCCTGC-CTCTTTAAC------GGGTGCAAGGCAAGGCTTGAAGATAGGACAGAGGCAGCGAGTCCTG----------- i mm10.chr13 I 733 C 0 s canFam3.chr4 37153466 144 + 88276631 TCTGGTTCCTCCATGGCATTAGATAA----TAGGGAAGG---ATGAAACCTGCCAGATGTTAAGATCCTG--TGA------G------GTATATGTGTGT-GCCTTGAGGATTATTTCCC-TACCCTGATCTATGGGGACGGGG------------AGCAGGTGTCCTAGGAGTGGATT-------------- i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 223378 173 - 960158 CCTGGTACATCTGTGGCCTGAGAT-CCGGTCAGGGTAGACATGTTTATCATGCTGTAGGTTAAG--CTTG--TGT------GAGAGGTATGTGTGT-----GCCTTGTGGATTATTTCCTCCCTCCTAACTTGTGTGGGTATATGGCAGTGT----AGCTGGGGTATGCGCAAAGGTCCTGGTGTGGGGGATT i dasNov3.JH562710 C 0 C 0 e proCoq1.NW_012152163v1 704777 310 - 940639 I a score=896824.000000 s hg38.chr5_KI270795v1_alt 20791 72 + 131892 GGGAGGCTGGTGCAGGGAGTCCTGACCAGAGGCAGGTGGATCCAAGGAAGGGGCTAAGCCCAGA----GCAGGCTC s panTro5.chr5 5269249 72 - 181907262 GGGAGGCTGGTGCAGGGAGTCCTGGCCAGAGGCAGGTGGATCCAAGGAAGGGGCTAAGCCCAGA----GCAGGCTC i panTro5.chr5 C 0 C 0 s panPan2.chr5 5531719 72 - 183735486 GGGAGGCTGGTGCAGGGAGTCCTGGCCAGAGGCAGGTGGATCCAAGGAAGGGGCTAAGCCCAGA----GCAGGCTC i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1629451 72 + 3967317 GGGAGGCTGGTGCAGGGAGTCCTGGCCAGAGGCAGGTGGATCCAAGGAAGGGGCTAAGCCCAGA----GCAGGCTC i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4481487 72 + 163208435 GGGAGGCTGGTGCAGGGAGTCCTTGCCAGAGGCAGGTGGATCCAAGGAAGGGGCTAAGCCTAGA----GCAGGCTC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5714193 71 - 180051392 AGGAGGCTGGTGCAGGGAGTCCTGGCCAGAGGCACGTGGATCCAAGGAACAGG-TAAGCCCAGA----GCAGGCTC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5905986 71 - 181584905 GGGAGGCTGGTGCAGGGAGTCCTGGCCAGAGGCACGTGGATCCAAGGAACAGG-TAAGCCCAGA----GCAGGCTC i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 935066 71 - 16193990 GGGAGGCTGGTGCAGGGAGTCCTGGCCAGAGGCACGTGGATCCAAGGAACAGG-TAAGCCCAGA----GCAGGCTC i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1752090 71 - 21434487 GGGAGGCTGGTGCAGGGAGTCCTGGCCAGAGGCACGTGGATCCAAGGAACAGG-TAAGCCCAGA----GCAGGCTC i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4720949 71 - 82825804 GGGAGGCTGGTGCAGGGAGTCCTGGCCAGAGGCACGTGGATCCAAGGAACAGG-TAAGCCCAGA----GCAGGCAC i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 216288 71 + 2521317 GGGAGGCTGGTGCAGGGAGTCCTGGCCAGAGGCACGTGGATCCAAGGAACAGG-TAAGCCCAGA----GCAGGCTC i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1707360 72 - 2415367 GGGAGGCTGGTGCAGGGAGCCCTGGCCAGAGGCACGTGGATCCAAGGAACAGGCTAAGCCCAGA----GCAGGCTC i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142779443 68 - 204313951 AGGA----GGGGCAGGGAGTCCTGGCTAGAGGCAGGTAGATCCAAGGAACAGGCTAAGCCCAGA----GCAGGCTC i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2177226 68 + 10068113 AGGA----GGGGCAGGGAGTCCTGGCTAGAGGCAGGAAGATCCAAGGAGCAGGCTAAGCTCAGA----GCAGGCTC i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 32989 68 - 709587 AGGA----CGGGCAGGGAGTGCTGGCTAGAGGCAGGTAGATCCAAGGAACAGGCTAAGCCCAGA----GCAGGCTC i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1127619 68 - 2246441 AGGA----GGGGCAGGGAGTCCTGGCTAGAGGCAGGTAGATCCAAGGAATAGGCTAAGCCCAGA----GCAGGCTC i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 705087 72 - 940639 GGGAGGCTAGTGCAGGGAGTCCTGGCCAGAGACAGGTAAATCCAAAGAATAGGCTAAGCCCAGA----GCAGGCTC i proCoq1.NW_012152163v1 I 310 I 176 s otoGar3.GL873522 1205277 71 + 48283576 GGGAGG-TAGTGCAGGAAGTCCTGTCCAGAGACAGGTAGATGCAAGGAACAGGCTACGCCCAGA----GTAGGCTT i otoGar3.GL873522 I 1 I 17 s mm10.chr13 65965092 62 - 120421639 ----GGCATATGCTGGTATCCGTGGGCAGAG--AAGCGGATCAGAGGAACTCAGTAAGCCCAGT----GCTG---- i mm10.chr13 C 0 C 0 s canFam3.chr4 37153610 67 + 88276631 GGGAGGCTAGTGCAGGGAGTATTGACCAGATGTAATTAGATCCAAAAAAGGGAAT-----CAGG----AAGAGTTC i canFam3.chr4 C 0 I 4 s dasNov3.JH562710 223551 65 - 960158 GGGAGGCTAGAGCAGCCGGTCCTCAC-AATGGCACTTAGACCTGAGGA----------CCCAGAGGCTGTAAGCTC i dasNov3.JH562710 C 0 C 0 a score=292031.000000 s hg38.chr5_KI270795v1_alt 20863 59 + 131892 CTAGGAGG--TCT--TGCAGGGGCGGGGGGTGTA---GGGT------CT-GGGGGAGGGAAGAC-------AGAGAGAAT-- s panTro5.chr5 5269321 59 - 181907262 CTAGGAGG--TCT--TGCAGGGGTGGGGGGTGTA---GGGG------CT-GGGGGAGGGAAGAC-------AGAGAGAAT-- i panTro5.chr5 C 0 C 0 s panPan2.chr5 5531791 59 - 183735486 CTAGGAGG--TCT--TGCAGGGGTGGGGGGTGTA---GGGG------CT-GGGGGAGGGAAGAC-------AGAGAGAAT-- i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1629523 57 + 3967317 CTAGGAGG--TCT--TGCAGGGGC-GGGGGTGTA---GGGG------CT--GGGGAGGGAAGAC-------AGAGAGAAT-- i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4481559 55 + 163208435 CTAGGAGG--TCT--TGCAGGGGTGGGGGGTGTA---GGGG------CT-GGGGGAGGGAAGAC-----------AGAAT-- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5714264 54 - 180051392 CTAGGAGG--TCT--TGCAGGGGTTGGGGG-GTA---GGGG------CT-GGGAGAGGGAAGAC-----------AGAAT-- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5906057 54 - 181584905 CTAGGAGG--TCT--TGCAGGGGTTGGGGG-GTA---GGGG------CT-GGGAGAGGGAAGAC-----------AGAAT-- i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 935137 54 - 16193990 CTAGGAGG--TCT--TGCAGGGGTTGGGGG-GTA---GGGG------CT-GGGAGAGGGAAGAC-----------AGAAT-- i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1752161 54 - 21434487 CTAGGAGG--TCT--TGCAGGGGTTGGGGG-GTA---GCGG------CT-GGGAGAGGGAAGAC-----------AGAAT-- i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4721020 54 - 82825804 CTAGGAGG--TCT--TGCAGGGGTTGGGGG-GTA---GGGG------CT-GGGAGAGGGAAGAC-----------AGAAT-- i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 216359 54 + 2521317 CTAGGAGG--TCT--TGCAGGGGTTGGGGG-GTA---GCGG------CT-GGGAGAGGGAAGAC-----------AGAAT-- i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1707432 54 - 2415367 CTAGGAGG--TCT--TGCAGGGGTTGGGGC-GTA---GGGG------CT-GGGAGAGGGAAGAC-----------AGAAT-- i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142779511 39 - 204313951 CTAGGAAG--TCT--TGCAGGGGAAGCAAT----------------------------GAAGAG---------AGAGCAT-- i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2177294 57 + 10068113 CTAGGAAG--TCT--TGCAGGGGCAGCAGGCGTG---GGAA------CG-GGGGGAGAGAAGAG---------AGAGCGT-- i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 33057 57 - 709587 CTAGGGAG--TCT--TGCCGGGGCAGCAGGCGTG---GGGA------CT-GGGGGAGAGAAGAG---------AGAGCAT-- i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1127687 56 - 2246441 CTAGGAAG--TCT--TGCAGGGGCAGCAGGCGTG---GG-A------CT-GGGGGAGAGAAGAG---------AGAGCAT-- i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1205365 61 + 48283576 CTGAGGTG--TGG--TGTACCAGAGGGGAG-TCA---GAGGCCAGCCCT-GGGAGATGCCATAA----------AAGTAT-- i otoGar3.GL873522 I 17 I 30 s mm10.chr13 65965154 48 - 120421639 ---------------TGCACAGAAGACAGATATG---GCAT------CTTGGGGGTGGGGAGGC--------AGGAGACT-- i mm10.chr13 C 0 I 34 s canFam3.chr4 37153681 55 + 88276631 CTGTGAGC--TCTGGAGTGAAGACTGTGTGTGTATCTGTGT------AT-GGGTGTGTTATGAG------------------ i canFam3.chr4 I 4 C 0 s dasNov3.JH562710 223616 66 - 960158 CAAGGCAGCATTT--AGCCAAAGAATAAGG-------GGAA------TT-AGGAAAAGGCCAATCCCCACACCAGAGCAAAA i dasNov3.JH562710 C 0 C 0 e proCoq1.NW_012152163v1 705159 176 - 940639 I a score=336598.000000 s hg38.chr5_KI270795v1_alt 20922 25 + 131892 -----------CTGGTTGGGGTGCGATGTGATGTGT s panTro5.chr5 5269380 25 - 181907262 -----------CTGGTTGGGGTGCGATGTGATGTGT i panTro5.chr5 C 0 C 0 s panPan2.chr5 5531850 25 - 183735486 -----------CTGGTTGGGGTGCGATGTGATGTGT i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1629580 25 + 3967317 -----------CTGGTTGGGGTGCGATGTGATGTGT i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4481614 25 + 163208435 -----------CTGGTTGGGGTGCGATGTGATGTGT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5714318 23 - 180051392 -----------CTGGTTGGG--GTGATGTGATGTGT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5906111 25 - 181584905 -----------CTGGTTGGGGTGTGATGTGATGTGT i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 935191 25 - 16193990 -----------CTGGTTGGGGTGTGATGTGATGTGT i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1752215 23 - 21434487 -----------CTGGTTGGG--GTGATGTGATGTGT i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4721074 23 - 82825804 -----------CTGGTTGGG--GTGATGTGATGTGT i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 216413 23 + 2521317 -----------CTGGTTGGG--GTGATGTGATGTGT i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1707486 25 - 2415367 -----------CTGGTTGGGGTGTGATGTGATGTGT i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 142779550 25 - 204313951 -----------CTGGTTGGGATGTGATGTGATGTGT i calJac3.chr2 C 0 N 0 s saiBol1.JH378186 2177351 25 + 10068113 -----------CTGGTTGGGGTGTGATGTGATGTGT i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 33114 25 - 709587 -----------CTGGTTGGGGTGTGGTGTGATGTGT i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1127743 25 - 2246441 -----------CTGGTTGGGGTGTGATGTGATGTGT i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 705335 25 - 940639 -----------CTGGTTGGGGTGTGATGTGATGTGT i proCoq1.NW_012152163v1 I 176 C 0 s otoGar3.GL873522 1205456 25 + 48283576 -----------CTGATTGGGGTGTGATGTGACATAT i otoGar3.GL873522 I 30 C 0 s mm10.chr13 65965236 25 - 120421639 -----------CTAATTGGAGTATAATGTGACGTGT i mm10.chr13 I 34 C 0 s canFam3.chr4 37153736 22 + 88276631 -----------CTGCAAGGGGTG---TGTGATATAT i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 223682 31 - 960158 TGTGTGTATTATGAGCTGGGGAGCAATGTGT----- i dasNov3.JH562710 C 0 C 0 a score=231875.000000 s hg38.chr5_KI270795v1_alt 20947 17 + 131892 GGGTTGGC--TCAGTTGAG s panTro5.chr5 5269405 17 - 181907262 GGGTTGGC--TCAGTTTAG i panTro5.chr5 C 0 C 0 s panPan2.chr5 5531875 17 - 183735486 GGGTTGGC--TCAGTTTAG i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1629605 17 + 3967317 GGGTTGGC--TCAGTTTAG i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4481639 17 + 163208435 GGGTTGGC--GCAGTTTAG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5714341 17 - 180051392 GGGTTGGC--CCAGTTTAG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5906136 17 - 181584905 GGGTTGGC--CCAGTTTAG i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 935216 17 - 16193990 GGGTTGGC--CCAGTTTAG i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1752238 17 - 21434487 GGGTTGGC--CCAGTTTAG i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4721097 17 - 82825804 GGGTTGGC--CCAGTTTAG i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 216436 17 + 2521317 GGGTTGGC--CCAGTTTAG i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1707511 17 - 2415367 GGGCTGGC--CCAGTTTAG i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64047666 17 + 204313951 GGGTGGGC--TCAGTTTAG i calJac3.chr2 N 0 C 0 s saiBol1.JH378186 2177376 17 + 10068113 GGGTGGGC--TCAGTTGAG i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 33139 17 - 709587 GGGTGGGC--TCAGTTTAG i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1127768 17 - 2246441 GGGTGGGC--TCAGTTTAG i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 705360 17 - 940639 GCGTGGGG--TCAGTTTAG i proCoq1.NW_012152163v1 C 0 C 0 s otoGar3.GL873522 1205481 17 + 48283576 AGGTGGGC--TCAGTTTAG i otoGar3.GL873522 C 0 I 300 s mm10.chr13 65965261 14 - 120421639 GGGTGGGC--TTAA---AG i mm10.chr13 C 0 C 0 s canFam3.chr4 37153758 19 + 88276631 CAGTGGCCTTTTAGTTTAA i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 223713 16 - 960158 -GGATGGC--TCAGTTTAG i dasNov3.JH562710 C 0 C 0 a score=164988.000000 s hg38.chr5_KI270795v1_alt 20964 11 + 131892 AGTGGCCAGGA s panTro5.chr5 5269422 11 - 181907262 AGTGGCCAGGA i panTro5.chr5 C 0 C 0 s panPan2.chr5 5531892 11 - 183735486 AGTGGCCAGGA i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1629622 11 + 3967317 AGTGGCCAGGA i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4481656 11 + 163208435 AGTGGCCGGGA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5714358 11 - 180051392 AGTGGCCAGCA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5906153 11 - 181584905 AGTGGCCAGCA i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 935233 11 - 16193990 AGTGGCCAGCA i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1752255 11 - 21434487 AGTGGCCAGGA i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4721114 11 - 82825804 AGTGGCCAGGA i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 216453 11 + 2521317 AGTGGCCAGGA i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1707528 11 - 2415367 AGTGGCCAGGA i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64047683 11 + 204313951 AGTGGTGAGGA i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2177393 11 + 10068113 AGTGGCCAGGA i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 33156 10 - 709587 AGTGGC-AGGA i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1127785 11 - 2246441 AGTGGCCAGGA i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 705377 11 - 940639 AGTGGCCAGGA i proCoq1.NW_012152163v1 C 0 C 0 s otoGar3.GL873522 1205798 11 + 48283576 AGTGGCCAAGA i otoGar3.GL873522 I 300 C 0 s mm10.chr13 65965275 11 - 120421639 AGTGGGGGGGA i mm10.chr13 C 0 I 483 s canFam3.chr4 37153777 11 + 88276631 AATGACCAGCA i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 223729 11 - 960158 AATAGCCAGGA i dasNov3.JH562710 C 0 C 0 a score=430767.000000 s hg38.chr5_KI270795v1_alt 20975 48 + 131892 ATGGGGTAGA-AATGTCCTTGAGC----CCTTTCCTGTTTGAAAGATGTATTC s panTro5.chr5 5269433 48 - 181907262 ATGGGGTAGA-AATGTCCTTGAGC----CCTTTCCTGTTTGAAAGAGGTATTC i panTro5.chr5 C 0 C 0 s panPan2.chr5 5531903 48 - 183735486 ATGGGGTAGA-AATGTCCTTGAGC----CCTTTCCTGTTTGAAAGAGGTATTC i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1629633 48 + 3967317 ATGGGGTAGA-AATGTCCTTGAGC----CCTTTCCTGTTTGAAAGATGTATTC i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4481667 51 + 163208435 GTAGGGTAGA-AATGTCCTTGAGCCCTTCCTTTCCTGTTTGAAAGATGCA-TC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5714369 36 - 180051392 ATGGGGTAGA-AATGCCCTTGAGC----GTTTTCCTGTT------------TC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5906164 36 - 181584905 ATGGGGTAGA-AATGCCCTTGAGC----GTTTTCCTGTT------------TC i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 935244 36 - 16193990 ATGGGGTAGA-AATGCCCTTGAGC----GTTTTCCTGTT------------TC i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1752266 36 - 21434487 ATGGGGTAGA-AATGCCCTTGAGC----GTTTTCCTGTT------------TC i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4721125 36 - 82825804 ATGGGGTAGA-AATGCCCTTGAGC----GTTTTCCTGTT------------TC i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 216464 36 + 2521317 ATGGGGTAGA-AATGCCCTTGAGC----GTTTTCCTGTT------------TC i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1707539 36 - 2415367 ATGGGGTAGA-AATGCCCTTGAGC----ATTTTCCTGTT------------TC i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64047694 36 + 204313951 ATGGGGTAGA-AATGCCTTTGAGC----CCTTGCCTGTT------------TC i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2177404 36 + 10068113 ATGGGGCAGA-AATGCCTTTGAGC----CCTTGCCTGTT------------TC i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 33166 36 - 709587 ATGGGGTAGA-AATGCCCTTGAGC----CCTTGCCTGTT------------CC i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1127796 36 - 2246441 ATGGAGTAGA-AATGCCTTTGAGC----CCTTGCCTGTT------------TC i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 705388 48 - 940639 ATGGGGTAGA-TATGCCCTTGAGC----CCTTTCTTGTTTCAGCGATGTATTC i proCoq1.NW_012152163v1 C 0 I 510 s otoGar3.GL873522 1205809 48 + 48283576 ATGGGACAGA-TATATCCTTGAAC----CCTTTCTTGTTTCAAGGATATCTTC i otoGar3.GL873522 C 0 C 0 s canFam3.chr4 37153788 49 + 88276631 GTGAGGTAGATAAACCCCTTACTC----CCTTTCCTGTTTCCAAGATGTATTT i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 223740 48 - 960158 AGAGAATAGA-CATGCCCTTAAGC----CCGTTCCTCTTTCAAAGACATATTC i dasNov3.JH562710 C 0 C 0 e mm10.chr13 65965286 483 - 120421639 I a score=5374384.000000 s hg38.chr5_KI270795v1_alt 21023 499 + 131892 ---------TGCTCCCTAAGGG--TTTTAGTTACACAAAGGACCAT--GAAATGTTTTCCTGCTTTGGAAGG---AAAAAAGCCCATAGACAGATGTAAAAG---GTAATTCCTCT-CTTCAGGAAGAGAGTAGAGGTTG-------AACA-----GAGTGTGTTGCGG-ACTC-AGAGATACCCAGATGTAGGTGAG---GCGTTGCGTTCTTTTCTCTCTC-TGACGCTGTGGTGCGGTGGAGATAACACTGGCTTCATAACTTGGGCAGAATCAGATTTGAAG-CTGG-CTCCAGCAGTGGTTTAtctgaacccactttgctcatccattaagt-ggagacaatgaatcccctt---cttgggtcgttaggaagattaaacaagataca---gcctgtacggtgtctagcacagcacctggcacaagggaggtgctta-ata-aGCCTTCCCCTTGCTTGAGGTGGAGGAGCTCCTAGCGAGAG----CATGGA-------------GACCTGTCACTGGTCTGTCATCCTTCTCAGCTCCAG-TGCCGCCA---CCAAGCGAGCA s panTro5.chr5 5269481 502 - 181907262 ---------TACTCCCTAAGGG--TTTTAGTTACACAAAGGACCAT--GAACTGTCTTCCTGCTTTGGAAGG---AAAAAAGCCCATAGACAGATGTAAAAG---GTAATTCCTCT-CTTCAGGAAGAGAGTAGAGGTTG-------AATA-----GAGTGTGTTGCGG-ACTC-AGAGACACCTAGATGTAGGTGAG---GCGTTGCATTCTTTTCTCTCTC-TGACGCGgtggtgcagtggaagtaacactggcttcataacttgggcagaagcagatttgaag-ctgg-ctccagcagtggtttatctgaacccactttgctcatccattaagt-ggagacagtgaatccccttctccttgggtcgttaggaagattaaacaagataca---gcctgtacagtgtctagcacagcacctggcacaagggaggtgctta-ata-aGCCTTCCCCTTGCTTGAGGTGGAGGAGCTCCTAGCGAGAG----CATGGA-------------GACCTGTCACTGGTCTGTCATCCTTCTCAGCTCCAG-TGCCGCCA---CCAAGCGAGCA i panTro5.chr5 C 0 C 0 s panPan2.chr5 5531951 502 - 183735486 ---------TACTCCCTAAGGG--TTTTAGTTACACAAAGGACCAT--GAACTGTCTTCCTGCTTTGGAAGG---AAAAAAGCCCATAGACAGATGTAAAAG---GTAATTCCTCT-CTTCAGGAAGAGAGTAGAGGTTG-------AATA-----GAGTGTGTTGCGG-ACTC-AGAGATACCTAGATGTAGGTGAG---GCGTTGCATTCTTTTCTCTCTC-TGACGCGgtggtgcagtggaagtaacactggcttcataacttgggcagaagcagatttgaag-ctgg-ctccagcagtggtttatctgaacccactttgctcatccattaagt-ggagacagtgaatccccttctccttgggtcgttaggaagattaaacaagataca---gcctgtacagtgtctagcacagcacctggcacaagggaggtgctta-ata-aGCCTTCCCCTTGCTTGAGGTGGAGGAGCTCCTAGCGAGAG----CATGGA-------------GACCTGTCACTGGTCTGTCATCCTTCTCAGCTCCAG-TGCCGCCA---CCAAGCGAGCA i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1629681 498 + 3967317 ---------TACTCCCTAAGGG--TTTTAGTTACACAAAGGACCAT--GAAATGTCTTCCTGCTTTGGAAGG---AAAAAAGCCCACAAACAGATGTAAAAG---GTAATTCCTCT-CTTCAGGA--AGAGTAGAGGTTG-------AATA-----GAGTGTGTTGCGG-ACTC-AGAGATACCCAGATGTAGGTGGG---GCGTTGCGTTCTTTTCTCTCTC-TGGCGCTGTGGTGTGGTGGAGATAACACTGGCTTCATAACTGGGGCAGAATCGGATTTGAAT-CTGG-CTCCGGCAGTGGTTTAtctgaacccactttgctcatccattaagt-ggagacaatgaatccccttctctttgggtcgttaggaagattaaacaagataca---gtctgtaaagtgtctagcacagcacctggcacaagggaggtgctta-ata-aGCCTT-CCCTTACTTGAGGTGGAGCAGCTCCTAGC-AGAG----CATGGA-------------GACCTGTCACTGGTCTGTCATCCTTCTCAGCTCCAG-TGCCACCA---CCAAGCGAGCA i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4481718 501 + 163208435 ---------TACTCCC-AAGGG--TTTCAGTTACACAAAGGACCAT--GAAATGTCTTCCTGCTTTGGAAGG---AAAAAAGCCCATAGACAGATGTAAAAG---AAAAGTCCTCT-CTTCAGGAAGAGAGTAGAGGTTG-------AATA-----GAGTGTGTTGCGG-ACTC-AGAGATACCTAGATGTAGGTGAG---GTGTTACATTCTTTTCTCTCTC-Tgacactgtggtgcagtggaaataacactggcttcataacttgggcagaatcagatttgaat-ctgg-ctccagcagtgatttatctgaacccactttgctcatccattaagt-ggggataatgaatccccttctccttgggttgttaggaagattaaacaagataca---gtctgtaaagtgtctagcacagcacctggcacaagggaggtgctta-ata-aGCCTTCCCCTTGCTTGAGGTGGAGCAGCTCCTAGCGAGAG----CGTAGA-------------GACCTGTCACTGGTCTGTCATCCTTCTCAGCTCCAG-TGCCGCCA---CCAAGCGAGCC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5714405 506 - 180051392 ---------TACTCCCTAAGGG--TTTTAGTTACACAAAGCACCAT--GAAATGCCTTCTGGCTTTGGAAGA---AAAAGAGCCCATAGACAGAATTAAAAG---GTAGGTCCTGT-TTTAAGGAAGAGAGTAGAGGTTG-------AATA-----GAGTGTGTTGCAA-ACTC-AGAGATACCTAGATGTAGGGGAG---GCGTTGCCTCCTTTTCTCTCTC-TGACAC--tggtgcagtggaaataatgctggcttcat-acttgggcagaatcagatttgaat-gtgg-ctccagcagtgatttatctgaacccattttgctcatccattaacc-cgggatgatgaatccccttctcctcgggtcgttaggaagattaaacaagataca---gtccgtaaagtgtccagcacagcacctggcaggagggaggtgctta-ata-aGCCTTCCCCTTGCTTGAGGTGGAGCAGCTCCCAGGGAAAGAGGCAGCAGG-------------GACCTGTTACGGGTCCGTCAGCCTTCTCAGCTCCAA-TGCCGCCGCTGCCGAGTGAGCC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5906200 502 - 181584905 ---------TACTCCCTAAGGG--TTTTAGTTACACAAAGCACCAT--GAAATGCCTTCTGGCTTTGGAAGA---AAAAGAGCCCATAGACAGAATTAAAAG---GTAGGTCCTGT-TTTAAGGCAGAGAGTAGAGGTTG-------AATA-----GAGTGTGTTGCAA-ACTC-AGAGATACCTAGATGTAGGGGAG---GCGTTGCCTCCTTTTCTCTCTC-TGACAC--tggtgcagtggaaataatgctggcttcat-acttgggcagaatcagatttgaat-ctgg-ctccagcagtgatttatctgaacccactttgctcatccattaacc-caggatgatgaatccccttctcctcgggtcgttaggaagattaaacaagataca---gtccgtaaagtgtccagcacagcacctggcaggagggaggtgctta-ata-aGCCTTCCCCTTGCTTGAGGTGGAGCAGCTCCCAGGGAGAG----CACAGG-------------GACCTGTCACGGGTCCGTCAGCCTTCTCAGCTCCAA-TGCCGCCGCTGCCGAGTGAGCC i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 935280 504 - 16193990 ---------TACTCCCTAAGGG--TTTTAGTTACACAAAGCACCAT--GAAATGCCTTCTGGCTTTGGAAGA---AAAAGAGCCCATAGACAGAATTAAAAG---GTAGGTCCTGT-TTTAAGGAAGAGAGTAGAGGTTG-------AATA-----GAGTGTGTTGCAA-ACTC-AGAGATACCTAGATGTAGGGGAG---GCGTTGCCTCCTTTTCTCTCTC-Tgacactgtggtgcagtggaaataatgctggcttcat-acttgggcagaatcagatttgaat-ctgg-ctccagcagtgatttatctgaacccactttgctcatccattaacc-caggatgatgaatccccttctccttgggtcgttaggaagattaaacaagataca---gtccgtaaagtgtccagcacagcacctggcaggagggaggtgctta-ata-aGCCTTCCCCTTGCTTGAGGTGGAGCAGCTCCCAGGGAGAG----CACAGG-------------GACCTGTTACGGGTCCGTCAGCCTTCTCAGCTCCAA-TGCCGCCGCTGCCGAGTGAGCC i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1752302 505 - 21434487 ---------TACTCCCTAAGGG--TTTTAGTTACACAAAGCACCAT--GAAATGTCTTCCGGCTTTGGAAGA---AAAAGAGCCCATAGACAGAATTAAAAG---GTAGGTCCTGT-TTTAAGGAAGAGAGTAGAGGTTG-------AATA-----GAGTGTGTTGCAA-ACTCAAGAGATACCTAGATGTAGGGGAG---GCGTTGCCTCCTTTTCTCTCTC-Tgacactgtggtgcagtggaaataatgctggcttcat-acttgggcagaatcagatttgaat-ccag-ctccagcagtgatttatctgaactcactttgctcatccattaact-cgggatgatgaatccccttctccttgggtcgttaggaagattaaacaagataca---gtctgtaaagtgtccagcacagcacctggcacatgggaggtgctta-ata-aGCCTTCCCCTTGCTTGAGGTGGAGCAGCTCCCAGGGAGAG----CACAGG-------------GACCTGTTACGGGTCCATCAGCCTTCTCAGCTCCAA-TGCCGCCGCTGCCGAGTGAGCC i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4721161 504 - 82825804 ---------TACTCCCTAAGGG--TTTTAGTTACACAAAGCACCAT--GAAATGTCTTCCGGCTTTGGAAGA---AAAAGAGCCCATAGACAGAATTAAAAG---GTAGGTCCTGT-TTTAAGGAAGAGAGTAGAGGTTG-------AATA-----GAGTGTGTTGCAA-ACTC-AGAGATACCTAGATGTAGGGGAG---GCGTTGCCTCCTTTTCTCTCTC-Tgacactgtggtgcagtggaaataatgctggcttcat-acttgggcagaatcagatttgaat-ctgg-ctccagcagtgatttatctgaacccactttgctcatccattaacc-tgggatgatgaatccccttctccttgggttgttaggaagattaaacaagataca---gtctgtaaagtgtccagcacagcacctggcacatgggaggtgctta-ata-aGCCTTCCCCTTGCTTGAGGTGGAGCAGCTCCCAGGGAGAG----CACAGG-------------GACCTGTTACGGGTCCGTCAGCCTTCTCAGCTCCAA-TGCCGCCGCTGCCGAGTGAGCC i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 216500 505 + 2521317 ---------TACTCCCTAAGGG--TTTTAGTTACACAAAGCACCAT--GAAATGTCTTCCGGCTTTGGAAGA---AAAAGAGCCCATAGACAGAATTAAAAG---GTAGGTCCTGT-TTTAAGGAAGAGAGTAGAGGTTG-------AATA-----GAGTGTGCTGCAA-ACTCAAGAGATACCTAGATGTAGGGGAG---GCATTGCCTCCTTTTCTCTCTC-Tgacactgtggtgcagtggaaataatgctggcttcat-acttgggcagaatcagatttgaat-ccag-ctccagcagtgatttatctgaacccactttgctcatccattaacc-cgggatgatgaatccccttctccttgggtcgttaggaagattaaacaagataca---gtctgtaaagtgtccagcacagcacctggcaggagggaggtgctta-ata-aGCCTTCCCCTTGCTTGAGGTGGAGCAGCTCCCAGGGAGAG----CACAGG-------------GGCCTGTTACGGGTCCATCAGCCTTCTCAGCTCCAA-TGCCGCCGCTGCCGAGTGAGCC i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1707575 503 - 2415367 ---------TACTCCCTAAGGG--TTTTAGTTACACAAAGCACCAT--GAAATATCTTCCGGCTTTGGTAGA---AAAAGAGCCCATAGACAGAATTAAAAA---GTAGGTCCTGT-TTTAAGGAAGAGAGTAGAGGTTG-------AATA-----GAGTGTGTTGCAA-ACTC-AGAGATACCTAGATGTAGGGGAG---GCGTTGCCTCCTTTTCTCTCTC-Tgacactgtggtgc-gtggaaataatgctggcttcat-acctgggcagaatcagatttgaat-ctgg-ctccagcagtgatttatctgagcccactttgctcatccattaacc-cgggatgatgaatccccttctccttgggttgttaggaagattaaacaagatata---gtctgtaaagtgtccagcacagcacctggcacacgggaggtgctta-ata-GGCCTTCCCCTTGCTTGAGGTGGAGCAGCTCCCAGGGAGAG----CACAGG-------------GACCTGTCACGGGTCCGTCAACCTTCTCAGCTCCAA-TGCCGCCACTGCCGAGTGAGCC i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64047730 515 + 204313951 ---------TACTCCTCAAAGG--TTTTAGTTACAAAAGGGGCCAT--GAAATGTCTCCCTGCTTTGGAAGG---AAAAAAGCCTATAGACAGAATTAAAGG---GTAAGTCCTGT-CTTCAGGAAGAGAGTAGAGGTTGAATATTAAATA-----GAATGTGTTGCAA-ACTC-AGAGATACGTGGATGTAGGTGAG---GTGTTGCATTCTTTTCTCTCGC-CAAcagtgtggtgcagtggaaataacgctggcttcat-----gggcagaatcagatttgaat-cctg-ctccagcagtgatttatgtgaacccactttgttctttcatttagt-ggggatagtgaatcccc-tttccttgggtcgttaagaggcttaaacaagataca-gtgtttgtaaagtgtctagcacaacacctggcacgagggaggtgct----ta-aGCTTCCCCCTTGCTTAAGGTGGAGCAGCTCCTAGTGAGAG----CACAGGGGCTGGCTGCAGAGACCTGTCACCAGTCCATCAGCCTTCTCAGTTCCAA-TGCCGCCG---CCAAGCGAGCC i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2177440 517 + 10068113 ---------TACTCCTTAAAGG--TTTTAGTTACAAACGGGACCAT--GAAATGTCTCCCTGCTTTGGAAGG---AAAAAAGCCTATAGACAGTATTAAAGG---GTAAGTCCTGT-CTTCTGGAAGAGAGTGGAGATTGAATATTAAATA-----GAATGTGTTGCAA-ACTC-AGAGATACGTGGATGTAGGTGAG---GTGTTGCATTCTTTTCTCTCTC-CGACA--Ctggtgcagtggaaataacgccggcttcat-----gggcagacacagatttgaat-cctg-ctccagcagtgatttatgtgaacccactttattctttcatttagt-gggggtactgaatccccttttccttgggtcgttaagaagcttaaacaagataca-gtgtctgtaaagtgtctagcacaacacctggcatgagggaggtgctta-ata-aGCCTCCCCCTTGCTTCAGGTGGAGCAGCTCCTAGTAAGAG----CACAGGGGCTGGCTGCAGAGACCTGTCATCGGTTCATCAGGCTTCTCATTTCCAA-TGCCACCG---CCAAGCGAGCC i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 33202 518 - 709587 ---------TACTCCTTAAAGG--TTTTAGTTACAAAAGGGACCAC--GAAATCTCTCCCTGCTTTGGAAGG---AAAAAAGCCTATAGACAGAATTAAAGG---GTAAGTCCTGT-CTTCAGGAAGAGAGCAGAGGTTGAATATTAAATA-----GAATGTGTTGCAA-ACTC-AGAGATACGTGGATGTAGGTGAG---GAGTTACATTCTTTTCTCTCTCTTGACA--Ctgatgcagtggaaataatgctggcttcat-----gggcagaatcagatttgaat-cctg-ctccagcagtaatttatgtgaacccactttgttctttcatttagt-gggagtagtgaatccccttttccttgggtggttaagaagcttaaacaagataca-gtgtctgtaaagtgtctagcacaacacctggcatgagggaggtgctta-ata-aGCCACCCCCTTGCTTAAGGTGGAGCAGCTCCTAGTGAGAG----CACAGGGGCTGGCTGCAGAGACCTGTCACTGGTCCATCAGCCTTCTCATTTCCAA-TGCCGCCG---CCAAGTGTGCC i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1127832 521 - 2246441 ---------TACTCCTTAAAGG--TTTTAGTTACAAAAGGGACATTTAGAAATGTCTCCCTGCTTTGGAAGG---AAAAAAGCCTATAGACAGAATTAAAGG---GTAAGTCCTGT-CTTCAGGTAGAGAGTAGAGGTTGAATATTAAATA-----GAATGTGTTGCAA-ACTC-AGAGGTACGTGGATGTAGGTTAG---GTGTTGCATTCTTTTCTCTCTC-Tgacactgtggtgcaatggaaataacgctggcttcat-----gggcagaatcagatttgaat-cctg-ctccagcagtgatttatgtgaacccactttgttctttcatttagt-ggggatagtgaatccccttttccttgggtcgttaagaagcttaaacaagataca-gtgtctgtaaagtgtctagcacaacacctggcatgagggaggtgctta-ata-aGCCTCCCCCTTGCTTAAGGTGGAGCAGCTCCTAGTGAGAG----CACAGGGGCTGGCTGCAGAGACCTGTCACCGGTCCATCAGCCTTCTCAGTTCCAA-TGCCGCCG---CCAAGCGAGCC i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1205857 478 + 48283576 ------------TCCTTAAAAGGCTTTTAGTCACCAAATGGACCAT--GAAATATCTATCTACTTGGGAAGG---AAAAA---CCATAGAAGG----AAAAG---GAAGGTGCTGT-CTTCAGGAAGGAATTAGAAACCATATA---GAGA-----GAGTGCATTGCAA-GCTC-AGAAATGCCTACATGTGGGC-AG---GTGTTGCCTTCTTTTCGCTCTC-Tgacactgtggtagaatgggaatgatactggcttt-------gggcagaagcaaatcgaatc-ctgg-ctccagcagtgatgtatctgaactaactttcctcatccattaagtgggggataatta--------------gggttattagaa---ttaaatgacctaaa-gtatttgtaacatgtctggcacagcacctggtacaaagGAGATGATTACAAA-AGCCTCT-----------GGT--AGTAGCCCCTAATGAGAG----CACAGGGGCTGGCTGTAGAGATAAGTTGTCAGTCTATCAGCTTTCTCAGAACCAAGTGCTCCAA---CTGTGTGAGCC i otoGar3.GL873522 C 0 C 0 s canFam3.chr4 37153837 530 + 88276631 ---------TATTCCCTAAGGG--TTTTAATCACAAAAGGGACCAG--AAAATGTCTTCCTTCTTTGGAAGGGGAAGAAAAGCCCATGAACAGAGTTAAAAG---GTGAGTCCTATCCTTCAGAAGGGGAGTAGAGATCG-------TACACCTAGAAGTGCCTTGCAC-ACTC-AGCAGCACCTATATGCGGGTAGGTAAGTATTGCCTCCTTTGCTCCCTC-Tgacagtgcggtacagtgaaaagagggctggcttcat-aggtgagcagaacgggatttgaat-cttgactccagcagtgattgacctgagcccacttgcatcatccataaagt-gcagatgataaatcctcttctccttaggtggtttggagaaccaaaggacataac-atatttgtaaagggtctaacacagcacctggtgtgcgggagatgctta-GCA---CATCCCTTCTCCTCGGGGAGGAGCAGCTTCTAATGAGAA--TCCACAGAGGCTGGCCGCAGAGACATGTCAGCAGTCTGTCAGCTTTCGTGGCTCTAAATGCTGGAG---CTGAGTGAGCC i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 223788 500 - 960158 TCCCTATTAAAGTTCCTAAGGC--ATTTAGTCACAAAAGGCATCAT--GAAATATCTATCCTTTTT-GAAGG---AAAAAAGCCCAT----AGGATTAGAAGATAATAAGCCTTATTTTTCAGGAGGGGAGTAGAG-TTG-------TATA--------TGTATAGCAGTGCTT------TGCCTGTATATA----CT---GTATTG---TCTTTTTACTCTC-CAATATT--------gtagaaacaatactggcttcct-acttggacagaactggatttgtatcctgg-ctctagtagtgatttattggagtctatgttccttatccataaagt-ggggataattaatcactttctcctctgtt--tttggagagttaaaggagataaaagtacctataaagtgtctagcataccacctggcacacaggaggtgctta-ataaaGCCCTTCCCCTG---GAGATGGAGCAGCTTCTAGTGAGAA----CACAGGGGCTGACTGCCCAGACATGTCATCAGTCCATTAGCTTTGTCAGCTTAAAATGTCATGG---CTAAGGGAGTC i dasNov3.JH562710 C 0 C 0 e mm10.chr13 65965286 483 - 120421639 I e proCoq1.NW_012152163v1 705436 510 - 940639 I a score=438147.000000 s hg38.chr5_KI270795v1_alt 21522 32 + 131892 ACGTT----CATCATTCCA-G-AGTGAGTGCTGTGAAG s panTro5.chr5 5269983 32 - 181907262 ACGTT----CATCATTCCA-G-AGTGAGTGCTGTGAAG i panTro5.chr5 C 0 C 0 s panPan2.chr5 5532453 32 - 183735486 ACGTT----CATCATTCCA-G-AGTGAGTGCTGTGAAG i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1630179 32 + 3967317 ACGTT----CATCATTCCA-G-AGTGAGTGCTGTGAAG i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4482219 32 + 163208435 ACGTT----CATCATTCCA-G-AGTGAGTGCTGTGAAG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5714911 32 - 180051392 ACGTT----CATCATTCCA-G-AGTAAGTGCTGTGAAG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5906702 32 - 181584905 ACGTT----CATCATTCCA-G-AGCGAGTGCTGTGAAG i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 935784 32 - 16193990 ACGTT----CATCATTCCA-G-AGTAAGTGCTGTGAAG i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1752807 32 - 21434487 ACATT----CATCATTCCA-G-AGTAAGTGCTGTGAAG i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4721665 32 - 82825804 ACGTT----CATCATTCCA-G-AGTGAGTGCTGTGAAG i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 217005 32 + 2521317 ACATT----CATCATTCCA-G-AGTAAGTGCTGTGAAG i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1708078 32 - 2415367 ACGTT----CATCATTCCA-G-AGTGAGTGCTGTGAAG i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64048245 31 + 204313951 ACGTT-----ATTATTACA-G-AGTGAGTGCTGTGAAG i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2177957 31 + 10068113 ATGTT-----ATCATTCCA-G-GGTGAGTGCTGTGAAG i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 33720 31 - 709587 ACGTT-----ATCATTCCA-G-AGGGAGTGCTGTGAAG i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1128353 36 - 2246441 ACGTTTGTTCATCATTCCA-G-AGTGATTGCTGTGAAG i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 705946 33 - 940639 ACGTT----CATCATTCCAGG-AGTAGGTGCCGTGAAG i proCoq1.NW_012152163v1 I 510 C 0 s otoGar3.GL873522 1206335 33 + 48283576 CTGTT----CATCATTCCAGG-AGCAGGTGCTGTGAAG i otoGar3.GL873522 C 0 C 0 s canFam3.chr4 37154367 33 + 88276631 ACATT----CGTCATTCCA-GTAGTAGGTGCTGTGAGG i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 224288 33 - 960158 ACATT----AATCCTTCCAGG-GGTAGGTGCTGTGAAG i dasNov3.JH562710 C 0 C 0 e mm10.chr13 65965286 483 - 120421639 I a score=943993.000000 s hg38.chr5_KI270795v1_alt 21554 78 + 131892 GGAGGATATGGATCCATCACACCCCGGGCGCAGTGGGAGGTTCAGAGGAGAAATA-TGAGATCTGCTTTCCGTTTGCAG s panTro5.chr5 5270015 78 - 181907262 GGAGGATATGGATCCATCACACCCCAGGCGCAGTGGGAGGTTCAGAGGAGAAATA-CGAGATCTGCTTTCCGTTTGCAG i panTro5.chr5 C 0 C 0 s panPan2.chr5 5532485 78 - 183735486 GGAGGATATGGATCCATCACACCCCAGGCGCAGTGGGAGGTTCAGAGGAGAAATA-TGAGATCTGCTTTCCGTTTGCAG i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1630211 77 + 3967317 GGAGGATATGGATCCATCACA-CCCGGGCGCAGTGGGAGGTTCAGAGGAGAAATA-TGAGATCTACTTTCCGTTTGCAG i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4482251 78 + 163208435 GGAGGATATGGATCCATCACACCCCGGGTGCAGTGGGAGGTTCAGAGGAGAAATA-TGAGATCTGCTTTCTGTTTGCAG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5714943 78 - 180051392 GGAGGTTATGGATCCATCACACCCCGGGTGCAGTGGGAGGTTCAGAAGAGAAATA-TGAGATCTGCTTTCCATTTGCAG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5906734 78 - 181584905 GGAGGTTATGGATCCATCACACCCCGGGTGCAGTGGGAGGTTCAGAGGAGAAATA-TGAGATCTGCTTTCCATTTGCAG i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 935816 78 - 16193990 GGAGGTTATGGATCCATCACACCCCGGGTGCAGTGGGAGGTTCAGAAGAGAAATA-TGAGATCTGCTTTCCATTTGCAG i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1752839 78 - 21434487 GGAGGTTATGGATCCATCACACCCTGGGTGCAGTGGGAGGTTCAGAAGAGAAATA-TGAGATCTGCTTTCCATTTGCAG i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4721697 78 - 82825804 GGAGGTTATGGATCCATCACACCCTGGGTGCAGTGGGAGGTTCAGAGGAGAAATA-TGAGATCTGCTTTCCATTTGCAG i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 217037 78 + 2521317 AGAGGTTATGGATCCATCACACCCCGGGCGCAGTGGGAGGTTCAGAGGAGAAATA-TGAGATCTGCTTTCCATTTGCAG i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1708110 78 - 2415367 GGAGGTTATGAATCCATCACACCCCGGGCGCAGTGGGAGGTTCAGAGGAGAAATA-TGAGATCTGCTTTCCATTTGCAG i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64048276 77 + 204313951 GGAGGAG-TGGATCCATCACACCACGGGCACAGTGGGAGGTTCAGAGGAGAAATA-TGAGATCTGCTTTCTGTTTGCAA i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2177988 78 + 10068113 GGAGAAGATGGATCCATCACACTCCGGGCGCAGTGGGAGGTTCAGAGGAGAAATA-TGAGATCTGCTTTCCGTTTGCAA i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 33751 78 - 709587 GGAGAAGATGGATCCATCACACCCCGGGCGCAGTGGGAGGTTCAGAGGAGAAATA-TGAGATCCGCTTTCCGTTTGCAA i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1128389 78 - 2246441 GGAGAAGATGGATCCATAACACCCCGGGCGCAGTGGGAGGTTCAAAGGAGAAATA-TGAGATCTGCTTTCTGTTTGCAA i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 705979 78 - 940639 GAAGGGGACGTATCTGTCACATTCTGGGCACACTGGGAGGTTCAGAGGAGAAATG-TTCGATCTGCTGTCTGCTTGCAG i proCoq1.NW_012152163v1 C 0 I 81 s otoGar3.GL873522 1206368 27 + 48283576 GCAGGAGATATATCAACCACACTCAGT---------------------------------------------------- i otoGar3.GL873522 C 0 C 0 s mm10.chr13 65965769 60 - 120421639 GAAGAAGACTGAGCCACCACA-CCTGGGCACAGCAGGTGGC---ATGGAGAAACG-TG--------------CTCACGG i mm10.chr13 I 483 C 0 s canFam3.chr4 37154400 77 + 88276631 AGAGGAGACCTATCTGCCAC-CCTTGGATGTGATGGGAGGTTCAGAGGAGAACTACTCCCACCTGCTTTCTG-TTGCAG i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 224321 78 - 960158 GGAGGAGACTTCTCAGTCATACCCTGGGCATGGTGGGAGCTTCGGTGGAGAAGTA-TTATGTATGCTTCCTGCTTGCAG i dasNov3.JH562710 C 0 C 0 a score=831342.000000 s hg38.chr5_KI270795v1_alt 21632 79 + 131892 TCAGTTTGGGCTCATGATGGATAAGTGTGTGTGTGTG-TGAACAAGTGGAGCATAACTCAG-A---CTGCACAGCAGCGGGT---GA s panTro5.chr5 5270093 77 - 181907262 TCAGTTTGGGCGCATGATGGATAA--GTGTGTGTGTG-TGAACAAGTGGAGCATAACTCAG-A---CTGCACAGCAGTGGGT---GA i panTro5.chr5 C 0 C 0 s panPan2.chr5 5532563 77 - 183735486 TCAGTTTGGGCGCATGATGGATAA--GTGTGTGTGTG-TGAACAAGTGGAGCATAACTCAG-A---CTGCACAGCAGTGGGT---GA i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1630288 77 + 3967317 TCAGTTTGGGCGCATGATGGATAA--GTGTGTGTGTG-TGAACAAGTGGAGCATAACTCAG-A---CTGCACAGCAGCGGGT---GA i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4482329 77 + 163208435 TCTGTTTGGGCGCATGATGGATAA--GTGTGTGTGTG-TGAACAAGTGGAGCATAACTCAG-A---TTGCACAGCAACGGGT---GA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5715021 75 - 180051392 TCTGTTTGGGCGCATGATGGATAA------GTGTGTG-TGAACAAGTGGAGCATAACTCAG-A---CTGCACA-GAACaggtggagg i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5906812 75 - 181584905 TCTGTTTGGGCGCATGATGGATAA------GTGTGTG-TGAACAAGTGGAGCATAACTCAG-A---CTGCACA-GAACaggtggagg i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 935894 75 - 16193990 TCTGTTTGGGCGCATGATGGGTAA------GTGTGTG-TGAACAAGTGGAGCATAACTCAG-A---CTGCACA-GAACaggtggagg i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1752917 71 - 21434487 TCTGTTTGGGCGCATGATGGGTAA--------GTGTG-TGAACAAGTGGAGCATAACTCAG-A---CTGCACaggaacaggt---gg i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4721775 71 - 82825804 TCTGTTTGGGCGCATGATGGATAA------GTGTGTG-TGAACAAGTGGAGCATAACTCAG-A---CCGCACAGGAACAGGT----- i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 217115 73 + 2521317 TCTGTTTGGGCGCATGATGGGTAA------GTGTGTG-TGAACAAGTGGAGCATAATTCAG-A---CCGCACaggaacaggt---gg i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1708188 73 - 2415367 TCTGTTTGGGTGCATGATGGGTAA------GTGTGTG-TGAACAAGTGGAACATAACTCAG-A---CCGCACAGAAACAGGT---GG i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64048353 75 + 204313951 TCTGTTTGGGTGCATAATGGATAA----GTGTGTGTG-TGAACAAGTGGAGCATAAGTCAG-A---CTGCACAGCAACGGGT---GA i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2178066 75 + 10068113 TCTGTTTGGGTGCATGATGGATAA----GTGTGTGTG-TGAACAAGAGGAACATAAGTCAG-A---CTGCACAGCAATGGGT---GA i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 33829 75 - 709587 TCTGTTTGGGTGCATGATGGATAA----GTGTGTGTG-TGAACAAGAGGAGCATAAGTCAG-A---CTGCACAGCAACGGGT---GA i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1128467 77 - 2246441 TCTGTTTGGGTGCATGATGGATAA--GTGTGTGTGTG-TGAACAAGAGAAACATAAGTCAG-A---CTGCACAGCAACGGGT---GA i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1206395 77 + 48283576 ---GTTTGGGCCCATGATGGATATGTGTGTGTGTGTG-TAAACAAGATTAGCACAACTCAGAA---CTGCACACCAACAGGG---GA i otoGar3.GL873522 C 0 I 3 s mm10.chr13 65965829 75 - 120421639 CCTGTTGGGATCTGTGATGGGTTT------GTGTGTGATGAACAAGGAGAGTGTAACTCAA-AG--CTGCTTGCTAGTGGAC---AG i mm10.chr13 C 0 I 1 s canFam3.chr4 37154477 78 + 88276631 TCTGTTTGGGTCTGTGATGGCTGT----GTGTGCAAG-TGGACAAGCGGAGCGTAAGTCAG-AGCTGTGCACACCAGTGGGG---GA i canFam3.chr4 C 0 I 6 s dasNov3.JH562710 224399 75 - 960158 TCTCTTTGG-CACATGGTGAATAT----GTGTGTGAG-TGAACAAGTGGAGCGTAACTCAA-AA--CTGCATGCCAGTGGGT---GA i dasNov3.JH562710 C 0 I 6 e proCoq1.NW_012152163v1 706057 81 - 940639 I a score=608150.000000 s hg38.chr5_KI270795v1_alt 21711 47 + 131892 AGGAGGAGGGGGGCAAAGCTCCTGTTAACTGAGGCTGCTGGGAAAGG s panTro5.chr5 5270170 47 - 181907262 AGGAGGAGGGGGGCAAAGCTCCTGTTAACTGAGGCTGCTGGGAAAGG i panTro5.chr5 C 0 C 0 s panPan2.chr5 5532640 47 - 183735486 AGGAGGAGGGGGGCAAAGCTCCTGTTAACTGAGGCTACTGGGAAAGG i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1630365 46 + 3967317 AGGAGGA-GGGGGCAAAGCTCCTGTTAACTGAGGCTGCTGGGAAAGG i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4482406 47 + 163208435 AGGAGGAGGAGGGCAAAGCTCCTGTTAGCTGAGGCTGCTGGGAAAGG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5715096 47 - 180051392 aggaggaggaggGCGAAGCTCCTGCTAGCTGAACCTGCTGGGAAAGG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5906887 47 - 181584905 aggaggaggaggGCGAAGCTCCTGCTAGCTGAGCCTGCTGGGAAAGG i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 935969 47 - 16193990 aggaggaggaggGCGAAGCTCCTGCTAGCTGAGCCTGCTGGGAAAGG i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1752988 47 - 21434487 aggaggaggaggGCGAAGCTCCTGCTAGCTGAGCCTGCTGGGAAAGG i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4721846 46 - 82825804 -GGAGGAGGAGGGCGAAGCTCCTGCTAGCTGAGCCTGCTGGGAAAGG i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 217188 47 + 2521317 aggaggaggaggGCGAAGCTCCTGCTAGCTGAGCCTGCTGGGAAAGG i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1708261 47 - 2415367 AGGAGGAGGAGGGCGAAGCTCCTGCTAGCTGAGCCTGCTAGGAAAGG i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64048428 46 + 204313951 AGGAGGAGGAGGGTGAA-CTCCTATTAGCTGAGGTTGCTGGGAAAGG i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2178141 46 + 10068113 AGGAGGAGGAGGGGGAG-CTCCTGTTAGCTGAGGCTCTTGGGAAGGG i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 33904 46 - 709587 AGGAGGAGGAGAGTAAA-CTCCTGTTAGCTGAGGCTGCTGGGAAAGG i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1128544 46 - 2246441 AGGACGAGGAGGGTAAA-CTCCTGTTAGCTGAGGTTGCTGGGAAAGG i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 706138 47 - 940639 AGGAGGAGGAGGGCAAGGCTCCTGCCAGCTGAGGCTGCTAGGAAAGG i proCoq1.NW_012152163v1 I 81 I 147 s otoGar3.GL873522 1206475 10 + 48283576 AGGAGGAGGA------------------------------------- i otoGar3.GL873522 I 3 C 0 s mm10.chr13 65965905 47 - 120421639 ATGGGGAAGAGGGCAGAGCTCCAGGTAGCTGAGGCACTTAGGAGTgg i mm10.chr13 I 1 C 0 s canFam3.chr4 37154561 47 + 88276631 AGGAGGAGGAGGGTAAAGCTCCTATTAGCAGAGCAGGCTGGGAGAGG i canFam3.chr4 I 6 C 0 s dasNov3.JH562710 224480 47 - 960158 AATAGGAGGAGAGTAAAGCTCTTGTTTGCTGCAGTTGCTAGGAAAGG i dasNov3.JH562710 I 6 C 0 a score=766055.000000 s hg38.chr5_KI270795v1_alt 21758 80 + 131892 --GTCGTATGGGGAGGGGGTGGCCTCAGTGCAGGCCTTGGGTAGAGCAGAGGTGAGTGCAGGA--------CAGGGGACAGGTGGGGGGG- s panTro5.chr5 5270217 80 - 181907262 --GTCGTATGGGGAGGGGGTGGCCTCAATGCAGGCTTTGGGTAGAGCAGAGGTGAGTGCAGGA--------CAGGGGACAGGTGGGGGGG- i panTro5.chr5 C 0 C 0 s panPan2.chr5 5532687 80 - 183735486 --GTCGTATGGGGAGGGGGTGGCCTCAATGCAGGCTTTCGGTAGAGCAGAGGTGAGTGCAGGA--------CAGGGGACAGGTGGGGGGG- i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1630411 80 + 3967317 --GTCGTATGGGGAGGGGGTGGCCTCAGTGCAGGCCTTGGGTAGAGCAGAGGTGAGTGCAGGA--------CAGGGGACAGGTGGGGGGG- i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4482453 79 + 163208435 --GTCGCATGGGGAGGGGGTGGCCTCAGTGCAGGCCTTGGGTAGAGCAGAGGTGAGTGCAGGA--------CAGGGGACAGGT-GGGGGG- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5715143 79 - 180051392 --GTTGACTGGGGAGGGGGTGGCCTCAGTGCAGGCATTGGGTAGAGCAGAGGTGAGTGCAGGG--------CAGGGGACAGGT-GAGGGG- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5906934 79 - 181584905 --GTCGCATGGGGAGGGGGTGGCCTCAGTGCAGGCCTTGGGTAGAGCAGAGGTGAGTGCAGGG--------CAGGCGACAGGT-GAGGGG- i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 936016 79 - 16193990 --GTCGCATGGGGAGGGGGTGGCCTCAGTGCAGGCATTGGGTAGAGCAGAGGTGAGTGCAGGG--------CAGGGGACAGGT-GAGGGG- i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1753035 79 - 21434487 --GTCGCATGGGGAGGGGCTGGCCTCAGTGCAGGCATTGGGTAGAGCAGAGGTGAGTGCAGGG--------CAGGGGACAGGT-GAGGGG- i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4721892 78 - 82825804 --GTCGCATGGGGA-GGGCTGGCCTCAGTGCAGGCATTGGGTAGAGCAGAGGTGAGTACAGGG--------CAGGGGACAGGT-GAGGGG- i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 217235 79 + 2521317 --GTCGCATGGGGAGGGGCTGGCCTCAGTGCAGGCATTGGGTAGAGCAGAGGTGAGTGCAGGG--------CAGGGGACAGGT-GAGGGG- i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1708308 79 - 2415367 --GTCGAATGAGGAGGGGGTGCCCTCAGTGCAGGCCTTGGATAGAGCAGAGTTGAGTGCAGGG--------CAGGGGACAGGT-GAGGGG- i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64048474 84 + 204313951 --GTTGCATGGGGAGGGGGTGGCCTCAGTGCAGGCCATGGATAGAGTGGAGATGAATGCAGGTGCAG--GGCAGGGGGCAGAT--GGGGG- i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2178187 84 + 10068113 --GTTGCATGGGGAGGGGGTGGCCTCAGTGCAGGCCATGGATAGAGTGGAGGTGAATGCAGGGGCAG--GTCAGGGGACAGAT--GGGGG- i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 33950 84 - 709587 --GTTGCATGGGGAGGGGGTGGCCTCAGTGCAGGCCATGGATAGAGTGGAGGTGAAGGCAGGGGCAG--GTCAGGGGACAGAT--GGGGG- i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1128590 84 - 2246441 --GTTGCATGGGGAGGGGGTGGCCTCAGTGCAGGCCATGGATAGAGTGGAGGTGAATGCAGGGGCAG--GTCAGGGGACAGAT--GGGGG- i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1206485 65 + 48283576 ---------GGAGAAGACAAGGCCTCCGTGCAGGTCTTGAGTATAGTGGGTATGAATGCAGG---------CCGAGGACGGGG-------- i otoGar3.GL873522 C 0 C 0 s mm10.chr13 65965952 73 - 120421639 ----------gggaggagg-------aagggaggaggaggaagaaagggaggagggggcaaaggaggaagagaagggagaggaggagggg- i mm10.chr13 C 0 I 1395 s canFam3.chr4 37154608 78 + 88276631 --ATTGGATGGAGAGGAAGTGGGCTCAGTGCAAGTCTTGAATACAGAGGGTGTGGCTGTGGGG--------GAGGGG-CATGT-GAGAAG- i canFam3.chr4 C 0 I 1 s dasNov3.JH562710 224527 82 - 960158 ACTGTGGATGGAGAAGAGCTGAAATTGGTGCAAGGCTTGAATACAGGGGTTGTGAATAAAGGG--------CAGAGGACCTGT-GAAGAAG i dasNov3.JH562710 C 0 C 0 e proCoq1.NW_012152163v1 706185 147 - 940639 I a score=547252.000000 s hg38.chr5_KI270795v1_alt 21838 49 + 131892 CGTTGCTGCAGCTTGGAGCCAAGCCAAGGT-GTGGC--CGTCAGTGTCCT-GG s panTro5.chr5 5270297 49 - 181907262 CGTTGCTGCAGCTTGGAGCCAAGCCAAGGT-GTGGC--CGTCAGTGTCCT-GG i panTro5.chr5 C 0 C 0 s panPan2.chr5 5532767 49 - 183735486 CGTTGCTGCAGCTTGGAGCCAAGCCAAGGT-GTGGC--CGTCAGTGTCCT-GG i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1630491 49 + 3967317 CGTTGCTGCAGCTTGGAGCCAAGCCAAGGT-GTGGC--CGTCAGTGTCCT-GG i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4482532 48 + 163208435 TGGTGCTGCAGCTTGGAGCCAC-CCAAGGT-GTGGC--CATCAGTGTCCT-GG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5715222 50 - 180051392 CGGTGCTGCAGCTCGGAGCCAAGCCAAGGAGGTGGC--CGTCAGTGTCCT-GG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5907013 50 - 181584905 CGGTGCTGCAGCTTGGAGCCAAGCCAAGGAGGTGGC--CGTCAGTGTCCT-GG i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 936095 50 - 16193990 CGGTGCTGCAGCTTGGAGCCAAGCCAAGGAGGTGGC--CGTCAGTGTCCT-GG i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1753114 50 - 21434487 CAGTGCTGCAGCTTGGAGCCAAGCCAAGGTGGTGGC--CGTCAGTGTCCT-GG i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4721970 50 - 82825804 CGGTGCTGCAGCTTGGAGCCAAGCCAAGGTGGTGGC--CGTCAGTGTCCT-GG i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 217314 50 + 2521317 CAGTGCTGCAGCTTGGAGCCAAGCCAAGGTGGTAGC--CGTCAGTGTCCT-GG i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1708387 50 - 2415367 CGATGCTGCAGCTTGGAGCCAAGCCAAGGTGGTGGC--CATTAGTGTCCT-GG i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64048558 50 + 204313951 CATTGCTGCAACTTGGAGCCAAGCCAAGGTGGTGGC--CGTCAGTGTCCT-AG i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2178271 50 + 10068113 CAGTGCTGCAGCTTGGAGCCAAGCCAGGGTGGTGGC--CGTGAGTGTCCT-GG i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 34034 50 - 709587 CAGTGCTGCAGCTTGGAGCCAAGCCAAGGTGGTGGC--CGTCAGTATCCT-GG i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1128674 50 - 2246441 CAGTGCTGCAGCTTGGAGCCAAGCCAAGGTGGTGGC--CGTCAGTGTCCT-GG i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1206550 42 + 48283576 ---TGCTGCAGCGCGGAGCAAAGCTGAGGTGGTGACTTTGTCAG--------G i otoGar3.GL873522 C 0 C 0 s canFam3.chr4 37154687 46 + 88276631 -GGTGCTGCAGCTTGGAACAGAGCAGAGGTGG------CATCCGTGTTCTGGG i canFam3.chr4 I 1 C 0 s dasNov3.JH562710 224609 47 - 960158 GGGTGCCAGAGCAATGAGCAAATCCAGGAGGGGGAC-----CAGTATCCT-GG i dasNov3.JH562710 C 0 T 55728 e mm10.chr13 65966025 1395 - 120421639 I e proCoq1.NW_012152163v1 706185 147 - 940639 I a score=354709.000000 s hg38.chr5_KI270795v1_alt 21887 37 + 131892 ACGT---GAAGATGGTCAGGGGCAGTAGGAGATGTCGCTG s panTro5.chr5 5270346 37 - 181907262 ACGT---GAAGATGGTCAGGGGCAGTAGGAGATGGCGCTG i panTro5.chr5 C 0 C 0 s panPan2.chr5 5532816 37 - 183735486 ACGT---GAAGATGGTCAGGGGCAGTAGGAGATGGCGCTG i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1630540 37 + 3967317 ACGT---GAAGATGGTCAGGGGCAGTAGGAGATGGCGCTG i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4482580 37 + 163208435 ACGT---GAAGATGGTCAGGGGCAGTAGGAGATGGCGCTG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5715272 37 - 180051392 ATGT---GAAGATGGTCAAGGCCAGTAGGAGATGGCACTG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5907063 37 - 181584905 ATGT---GAAGATGGTCAGGGCCAGTAGGAGATGGCACTG i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 936145 37 - 16193990 ATGT---GAAGATGGTCAGGGCCAGTAGGAGATGGCACTG i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1753164 37 - 21434487 ACGT---GAAGACGGTCAGGGCCAGTAGGAGATGGCACTG i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4722020 37 - 82825804 ACGT---GAAGATGGTCAGGGCCAGTAGGAGATGGCACTG i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 217364 37 + 2521317 ACGT---GAAGATGGTCAGGGCCAGTAGGAGATGGCACTG i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1708437 37 - 2415367 ACGT---GAAGATGGTCAGGGCCAGTAGGAGATGGCACTG i colAng1.NW_012115755v1 C 0 I 7 s calJac3.chr2 64048608 36 + 204313951 ATGT---GCAGATGGTCAGGG-CAGCAGGAGATGGTGCTG i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2178321 36 + 10068113 ATGT---GAAGATGGTCAGGG-CAACAGGTGATGGTGCTG i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 34084 36 - 709587 ATGT---GAAGATGGTCGGGG-CAGCAGGTGTTGGTGCTG i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1128724 36 - 2246441 ATGT---GAAGATGGTCGGGG-CAGCAGGAGATGGTGCTG i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1206592 24 + 48283576 ATGT---GGAGAAGGT---GGCCAGGGGAA---------- i otoGar3.GL873522 C 0 C 0 s canFam3.chr4 37154733 40 + 88276631 ATGTGGAGGAGGTGGTCAGGTGGAATGTGAGGTGGGGTTG i canFam3.chr4 C 0 C 0 e mm10.chr13 65966025 1395 - 120421639 I e proCoq1.NW_012152163v1 706185 147 - 940639 I e dasNov3.JH562710 224656 55728 - 960158 T a score=1556803.000000 s hg38.chr5_KI270795v1_alt 21924 130 + 131892 GAGGGAAGAGGGAGGGAGGGGTGTCTGGTTCTGAGTGGTTTCAGTTTGGACTGGctggtagtgtggctgggtgagtaggtaagagacggatatacctgggttcagatcctt-tcctgccattgctaacagg s panTro5.chr5 5270383 130 - 181907262 GAGGGAAGAGGGAGGGAGGGGTGTCTGGTTCTGAGTGGTTTCAGTTTGGACTGGctggtagtgtggctgggtgagtaggtaagagacggatatacctgggttcagatcctt-tcctgccattgctaacagg i panTro5.chr5 C 0 C 0 s panPan2.chr5 5532853 130 - 183735486 GAGGGAAGAGGGAGGGAGGGGTGTCTGGTTCTGAGTGGTTTCAGTTTGGACTGGctggtagtgtggctgggtgagtaggtaagagacggatatacctgggttcagatcctt-tcctgccattgctaacagg i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1630577 130 + 3967317 GAGGGAAGAGGGAGGGAGGGGTGTCTGGTTCTGAGTGGTTTCAGTTTGGACTGGctggtagtgtggctgggtgagtaggtaagagacggatatacctgggttcagatcctt-tcctgccattgctaacagg i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4482617 128 + 163208435 GAGGGAAGAGGGAGGGAGGGGTGTCTGGTTCTGGGTGGTTTCAGTTTGAACTGGctggtagtgtggctgggtgagtaggtaagagacggatatacctgggttcagatcctt-tcctgccattgctaac--g i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5715309 129 - 180051392 GAGGGAAGAGGGAGGGAGGGGTGTCTGGTTCTGGGTGGTTTCAGTTTGGACTGGctggtagcgtggctggctgagtaggtaagagac-gatgtacctgggttcagatcctt-tcctgccattgctaacagg i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5907100 130 - 181584905 GAGGGAAGAGGGAGGGAGGGGTGTCTGGTTCTGGGTGGTTTCAGTTTGGACTGGctggtagcgtggctggctgagtaggtaagagacggatgtacctgggttcagatcctt-tcctgccattgctaacagg i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 936182 130 - 16193990 GAGGGAAGAGGGAGGGAGGGGTGTCTGGTTCTGGGTGGTTTCAGTTTGGACTGGctggtagcgtggctggctgagtaggtaagagacggatgtacctgggttcagatcctt-tcctgccattgctaacagg i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1753201 130 - 21434487 GAGGGGAGAGGGAGGGAGGGGTGTCAGGTTCTGGGTGGTTTCAGTTTGGACTGGctggtagcgtggctggctgagtaggtaagagacggatatacctgggttcagatcctt-tcctgccattgctaacagg i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4722057 130 - 82825804 GGGGGAAGAGGGAGGGAAGGGTGTCAGGTTCTGGGTGGTTTCAGTTTGGACTGGctggtagcgtggctggctgagtaggtaagagacggatatacctgggttcagatcctt-tcctgccattgctaacagg i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 217401 130 + 2521317 GAGGGGAGAGGGTGGGAGGGGTGTCAGGTTCTGGGTGGTTTCAGTTTGGACTGGctggtagcgtggctggctgagtaggtaagagacggttatacctgtgttcagatcctt-tcctgccattgctaacagg i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1708481 130 - 2415367 GAGGGAAGAGGGAGGGAAGGGTGTCTGGTTCTGGGTGGTTTCAGTTTGGACTGGCTggtagtgtggctgggtgagtaggtaagagacggatatacctgggttgagatcctt-tcctgccattgccaacagg i colAng1.NW_012115755v1 I 7 C 0 s calJac3.chr2 64048644 129 + 204313951 GAGGGAAGAAGGAGGGAGGAGTATCAGGCTCTGGGTGGTTTCAGTTTGGGCTGGCTGGTAGTGAGGCTGGGTGAATAGGTAAGAGATGGAGATacct-agttcagatcctt-tcctgccattgggaacagg i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2178357 129 + 10068113 GAGGGAAGAGGGAGGGAGGGGTGTCAGGCTCT-GGTGGTTTCAGTTTGGGCTGGCTGGTGGTGAGGCTGGGTGAGTAGGTAAGAGATGGAGATACCTGGGTTCAGATCCTT-TCCTGCCATTGGGAACAGG i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 34120 130 - 709587 GAGGGAAGAGGGAGGGACGGGTGTCAGGCTCTGGGTGGTTTCAGTTTGGGCTGGCGGGTATTGAGGCTGGGTGAGTAGGTAAGAGATGgagatacctgggttcagaccctt-tcctgccattgggaacagg i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1128760 130 - 2246441 GAGGGAAGAAGGAGGGAGAGGTGCCAGGCTCTGGGTAGTTTCAGTTTGGGCTGGTtggtagtgaggctgcgtgagtacgtaagagatggagatacctgggttcagatcctt-tcctgccattgggaacagg i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 706332 130 - 940639 GAGGGAAGTGGGAGGGAGGGGTGCCAGGGTCTGGATAGATTCAGTTTGGACTGACCGGTAATATGGCCggctgagtagggaagagacagatagacctgggttcaaatcctt-ttctaccactgctaatggg i proCoq1.NW_012152163v1 I 147 C 0 s otoGar3.GL873522 1206616 96 + 48283576 --------------------------GTTTTTAG--------AGTTTGGACTGGCTGGTAGAGTGGCTAGGTGAGTAGGGAAGAGACAGATAGGCTAGGGTTCAAATCTTT-TTCTGCAGCTGCCAAAGGG i otoGar3.GL873522 C 0 C 0 s canFam3.chr4 37154773 112 + 88276631 --GAGAGAAAGGAGGGA--GGTGTTGGGCTT--GGTGATGTTGGTTcatactggttagtagtgcggcctgctgagtagggcagacttggatagacctggcttcaaatccttgttctg-------------g i canFam3.chr4 C 0 C 0 e mm10.chr13 65966025 1395 - 120421639 I e dasNov3.JH562710 224656 55728 - 960158 T a score=1109795.000000 s hg38.chr5_KI270795v1_alt 22054 103 + 131892 gagactttagccaaattacttcacctccatg------attttgcttgtctttaagatgtgcctgatggtaatgtgacttag-gagggttcaatgagttgctgtgtgtaaa s panTro5.chr5 5270513 103 - 181907262 gagactttagccaaattacttcacctccatg------attttgcttgtctttaagatgtgcctgatggtaatgtgacttag-gagggttcaatgagttgctgtgtgtaaa i panTro5.chr5 C 0 C 0 s panPan2.chr5 5532983 103 - 183735486 gagactttagccaaattacttcacctccatg------attttgcttgtctttaagatgtgcctgatggtaatgtgacttag-gagggttcaatgagttgctgtgtgtaaa i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1630707 103 + 3967317 gagactttagccaaattacttcacctccatg------attttgcttgtctttaagatgtgcctggtggtaatgtgacttag-gagggttcaatgagttgctgcgtgtaaa i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4482745 103 + 163208435 gagactttagccaaattacttcaccttcatg------attttgcttgtctttaagatgtgcctgatggtcatgtgactcag-gagggttaaatgagtggctgtgtgtaaa i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5715438 103 - 180051392 gagactttagccaaattacttcacctccatg------attttgcttgtctttaagatgtgcctgatggtcgtgtgacttag-gagggttacatgagttgctgcgtgtaaa i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5907230 103 - 181584905 gagactttagccaaattacttcacctccatg------attttgcttgtctttaagatgtgcctgatggtcgtgtgacttag-gagggttacatgagttgctgtgtgtaaa i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 936312 103 - 16193990 gagactttagccaaattacttcacctccatg------attttgcttgtctttaagatgtgcctgatggtcgtgtgacttag-gagggttacatgagttgctgcgtgtaaa i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1753331 103 - 21434487 gagactttagccaaattacttcacctccatg------attttgcttgtctttaagatgtgcctgatggtcgtgtgacttag-gagggttacatgagttgctgtgtgtaaa i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4722187 103 - 82825804 gagacttgggctaaattacttcacctccatg------attttgcttgtctttaagatgtgcctgatggtggtgtgacttag-gagggttacatgagttgctgtgtgtaaa i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 217531 103 + 2521317 gagactttagccaaattacttcacctccatg------attttgcttgtctttaagatgtgcctgatggtcgtgtgacttag-gagggttacatgagttgctgtgtgtaaa i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1708611 103 - 2415367 gagactttggccaaattacttcacctccatg------tttttgcttgtctttaagatgtgcctgatggtagtgtgactcag-gagggttacatgagttgctgcgtgtaaa i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64048773 90 + 204313951 gagactttggccaaattacttcacctctatg------attttgc-tatctttaagatgtgcctgata-----gtgatTCAG-GAGG---TCAAGAGTTGT----GGTAAA i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2178486 92 + 10068113 GAGAATTTGGCCGAATTACTTCACCTCCATG------ACTTCGC-TGTCTTTAAGATGTGCCTGATAG---TGTGATTCAG-GAGG---TCAAGAGTTGT----GGTAAA i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 34250 89 - 709587 gagactttggccaaattacttcacctcCATG------ACATCGC-TATCTTTAAGATGTGCCTGATAG---TGTGATTCAG-GAGG---TCAAGAGTT-------GTAAA i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1128890 92 - 2246441 gagactttggccaaattactttacctccatg------attttgc-tatctctaagatgtgcctgatag---tgTGATTCAG-GAGG---TCAAGAGTTGT----GGTAAA i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 706462 103 - 940639 gagactttggccacattatttcacatgcatg------attttgcttatctctaagatgtccataacaatggtgtgacttat-gagggttaagggagttgacatgtgtaaa i proCoq1.NW_012152163v1 C 0 I 50 s otoGar3.GL873522 1206712 77 + 48283576 -----------------------TATCCATG------ATTCTGCTTATCTTTTACATGTGCAT---AATAGTGTCACTAAC-AAGAGTTGAGTGAGTTGATGTGTGTAAA i otoGar3.GL873522 C 0 I 1 s canFam3.chr4 37154885 99 + 88276631 aagaatttggccatcttacctcacctccaca------gttttgcttatccttaaaatgtacataataatactatagcttat-gag----aactgagttgacatttgtaaa i canFam3.chr4 C 0 I 1 s dasNov3.JH562710 168928 108 - 960158 GAgactttggccaatttacttcacctccatgagcctcagttttcttatctttaaaatgttcatagtaa-cgtacaacttcgtgagtgttaaatgaactgatatgtaaaa- i dasNov3.JH562710 T 55728 C 0 e mm10.chr13 65966025 1395 - 120421639 I a score=515739.000000 s hg38.chr5_KI270795v1_alt 22157 45 + 131892 tgcctggcacactgtggg----cgtgcaggaaacagcagctctT---GTTAC s panTro5.chr5 5270616 45 - 181907262 tgcctggcacactgtggg----tgtgcaggaaacagcagctctT---GTTAC i panTro5.chr5 C 0 C 0 s panPan2.chr5 5533086 45 - 183735486 tgcctggcacactgtggg----tgtgcaggaaacagcagctctT---GTTAC i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1630810 45 + 3967317 tgcctggcacactgtggg----tgtgcaggaaacagcagctctT---GTTAC i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4482848 45 + 163208435 tgcctggcacactgtggg----tgtgcagtcaacagcagctctt---gttat i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5715541 45 - 180051392 tgcctggcacactgtggg----ggtgcaggaaacagcagctctT---GTTAT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5907333 45 - 181584905 tgcctggcacactgtggg----ggtgcaggaaacagcagctctT---GTTAT i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 936415 45 - 16193990 tgcctggcacactgtggg----ggtgcaggaaacagcagctctT---GTTAT i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1753434 38 - 21434487 tacctggcacactgTGG-----------GGAAACAGCAGCTCTT---GTTAC i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4722290 45 - 82825804 tgcctggcacactgtggg----ggtgcaggaaacagcagctctT---GTTAT i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 217634 45 + 2521317 TACCTGGCACACTGTGGG----GGTGCAGGAAACAGCAGCTCTT---GTTAC i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1708714 49 - 2415367 tgcctggcacactgcGGGGGGTGGTGTAGGAAACAGCAGCTCTT---GTTAT i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64048863 43 + 204313951 TGCCTGGCACA--GTGGG----TATGCAGGAAACAGCAGCTCTT---GTTAT i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2178578 43 + 10068113 TGCCTGGCACA--GTGGG----TGTGCAGGAAACAGCAGCTGTT---GTTAT i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 34339 43 - 709587 TGCGTGGCACA--GTGGG----TATGCAGGAAACAGCAGCTCTT---GTTAT i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1128982 43 - 2246441 TGCCTGGCACT--GTGGG----TGTGCAGGAAACAGCAGCTTTT---GTTAT i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1206790 48 + 48283576 TGCCTGGCAGGTTGTGGA----TGTGCAGTAAACAATAGCTATTATCGTTAT i otoGar3.GL873522 I 1 C 0 s canFam3.chr4 37154985 45 + 88276631 tgcctggcacattgtgga----tggtcagtaaacagcagctgtt---attat i canFam3.chr4 I 1 C 0 s dasNov3.JH562710 169036 45 - 960158 tgcttgacaccttgtgga----tgctcaaggaatagcaattatt---attat i dasNov3.JH562710 C 0 I 56091 e mm10.chr13 65966025 1395 - 120421639 I e proCoq1.NW_012152163v1 706565 50 - 940639 I a score=-5580.000000 s hg38.chr5_KI270795v1_alt 22202 1 + 131892 -C s panTro5.chr5 5270661 1 - 181907262 -C i panTro5.chr5 C 0 C 0 s panPan2.chr5 5533131 1 - 183735486 -C i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1630855 1 + 3967317 -C i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4482893 1 + 163208435 -G i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5715586 1 - 180051392 -G i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5907378 1 - 181584905 -G i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 936460 1 - 16193990 -G i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1753472 1 - 21434487 -G i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4722335 1 - 82825804 -G i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 217679 1 + 2521317 -G i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1708763 1 - 2415367 -G i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64048906 1 + 204313951 -G i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2178621 1 + 10068113 -G i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 34382 1 - 709587 -G i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1129025 1 - 2246441 -G i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1206838 1 + 48283576 -G i otoGar3.GL873522 C 0 C 0 s canFam3.chr4 37155030 1 + 88276631 -G i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 225172 1 - 960158 c- i dasNov3.JH562710 I 56091 C 0 e mm10.chr13 65966025 1395 - 120421639 I e proCoq1.NW_012152163v1 706565 50 - 940639 I a score=611038.000000 s hg38.chr5_KI270795v1_alt 22203 49 + 131892 TAGGTGCTAATACCATACGTGTGTGCTGTAT-AA-CCTCCCTACCTTAGGA s panTro5.chr5 5270662 49 - 181907262 TAGGTGCTAATACCATACGCGTGTGCTGTAT-AA-CCTCCCTACCTTAGGA i panTro5.chr5 C 0 C 0 s panPan2.chr5 5533132 49 - 183735486 TAGGTGCTAATACCATACGCGTGTGCCGTAT-AA-CCTCCCTACCTTAGGA i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1630856 49 + 3967317 TAGGTGCTAATACCATACGTGTGTGCTGTAT-AA-CCTCCCTACCTTAGGA i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4482894 49 + 163208435 TAGGTGCTAATACCATATGTGTGTGCTGTAT-AA-CCTCCCTATCTTAGGA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5715587 49 - 180051392 GAGGTGCTAATACCATATGTGTGTGCTGTAT-AA-CCTTCCTACCTTAGGA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5907379 47 - 181584905 GAGGTGCTAATACC--ATGTGTGTGCTGTAT-AA-CCTTCCTACCTTAGGA i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 936461 49 - 16193990 TAGGTGCTAATACCATATGTGTGTGCTGTAT-AA-CCTTCCTACCTTAGGA i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1753473 47 - 21434487 TAGGTGCTAATACC--ATGTGTGTGCTGTAT-AA-CCTTCCTACCTTAGGA i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4722336 47 - 82825804 TAGGTGCTAATACC--ATGTGTGTGCCGTAT-AA-CCTTCCTACCTTAGGA i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 217680 47 + 2521317 TAGGTGCTAATACC--ATGTGTGTGCTGTAT-AA-CCTTCCTACCTTAGGA i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1708764 49 - 2415367 TAGGTGCTAATACCATATGTGTGTGCTGTAT-AA-CCTTCCTACCTTAGGA i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64048907 49 + 204313951 CAGGTGCTAATACCATATGTGTGTGCTATAT-AA-CCTTCCTACCTTAGGA i calJac3.chr2 C 0 I 1835 s saiBol1.JH378186 2178622 49 + 10068113 TAGGTGCTAATACCATATGTGTGTGCTGTAT-AA-CCTTCCTACCTTAGGA i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 34383 49 - 709587 TAGGTGCTAATACCATATGTGTGTGCTGTAT-AA-GCTTCCTACCTCAGGA i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1129026 49 - 2246441 TAGGTGCTAATACCATATGTGTGTGCTGTAT-AA-CCTTCCTACCTTAGGA i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 706615 49 - 940639 TATGTGTTAATGCTGTATGTGTGTGCTACATAAA-CCTTCCTACCTGAAG- i proCoq1.NW_012152163v1 I 50 C 0 s otoGar3.GL873522 1206839 49 + 48283576 TAGATGTTAATACCACATGTATGTGCTATGTAAA-CTTTCGTACATGAAG- i otoGar3.GL873522 C 0 C 0 s canFam3.chr4 37155031 50 + 88276631 TAGGTGTTCATATTATATCTGTGTACAATAG-AAGTCTTCCAACCTTATGA i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 225173 49 - 960158 tcagtgctaataTTCTATTTGTGTGCAGTGGAAA-CCTTCCTGTCTTATG- i dasNov3.JH562710 C 0 C 0 e mm10.chr13 65966025 1395 - 120421639 I a score=661342.000000 s hg38.chr5_KI270795v1_alt 22252 54 + 131892 AGGGGTTTTCAGTGTCCCCTGGGCTCATCACAT--TGTCTAAAAGGGAGGGATATA s panTro5.chr5 5270711 54 - 181907262 AGGGGTTTTCAGTGTCCCCTGGGCTCATCACAT--TGTCTAAAAGGGAGGGATATA i panTro5.chr5 C 0 C 0 s panPan2.chr5 5533181 54 - 183735486 AGGGGTTTTCAGTGTCCCCTGGGCTCATCACAT--TGTCTAAAAGGGAGGGATATA i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1630905 54 + 3967317 AGGGGTTTTCACTGTCCCCTGTGCTCATCACAT--TGTCTAAAAGGGAGGGATATA i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4482943 54 + 163208435 AGGGGCTTTCAGTGTCCCCTGGGCTCATCTCAT--TGTCTAAAAGGGAGGGATATA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5715636 56 - 180051392 AGGGCCTTTCGCTGTCCCCTGGGCTCAACACATTGTGTCTAAAAGGGAGGGATATA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5907426 56 - 181584905 AGGGGCTTTCGCTGTCCCCTGGGCTCAACACATTGTGTCTAAAAGGGAGGGATATA i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 936510 56 - 16193990 AGGGGCTTTCGCTGTCCCCTGGGCTCAACACATTGTGTCTAAAAGGGAGGGATATA i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1753520 56 - 21434487 AGGGGCTTTCGCTGTCCCCTAGGCTCAACACATTGTGTCTAAAAGGGAGGGATATA i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4722383 56 - 82825804 AGGCGCTTTCGCTGTCCCCTGGGCTCAACACATTGTGTCTAAAAGGGAGGGATATA i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 217727 56 + 2521317 AGGGGCTTTCGCTGTCCCCTAGGCTCAACACATTGTGTCTAAAAGGGAGGGATATA i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1708813 56 - 2415367 AGGGGCTTTCGCTGTCCCCTGGGCTCAACACGTTGTGTCTAAAAGGGAGGGATATA i colAng1.NW_012115755v1 C 0 C 0 s saiBol1.JH378186 2178671 56 + 10068113 AGGGGCTTTCACTGTCTCCTTGGCTTATCACGTTGTGTCTAAAAGGGAGAGATATA i saiBol1.JH378186 C 0 I 2 s cebCap1.NW_016107999v1 34432 56 - 709587 AGGGGCTTTCACTGTCCCCTTGGCTCATCACATTGTGTCTAAAAGGGAGAGATATA i cebCap1.NW_016107999v1 C 0 I 2 s aotNan1.NW_018501968v1 1129075 56 - 2246441 AGGGGCTTTCACTGTCCCCTTGGCTCATCACATTGTGTCTAAAAGGGAGGGATATA i aotNan1.NW_018501968v1 C 0 I 6414 s proCoq1.NW_012152163v1 706664 56 - 940639 AGGGGCTTTCACTGTCCCCTGGGCTCATCACATTGTCTCTAAAAGGGAGGGATGTG i proCoq1.NW_012152163v1 C 0 C 0 s otoGar3.GL873522 1206888 56 + 48283576 AGGGGCTTTCACTATCGCCTGGGCTCATCACATTGTGTCTAAAAGGAAGAGATAAA i otoGar3.GL873522 C 0 C 0 s canFam3.chr4 37155081 52 + 88276631 ---GGCTTTCCCTGT-GCCTGAGCTAACCACATTGTGTGCAAAAGGGACGGTTATA i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 225222 51 - 960158 --GGGCTTTCATCATCCCTTGGGCTCATCA-ATTTTGTATGAAAGGGAAAGATA-- i dasNov3.JH562710 C 0 C 0 e mm10.chr13 65966025 1395 - 120421639 I e calJac3.chr2 64048956 1835 + 204313951 I a score=197963.000000 s hg38.chr5_KI270795v1_alt 22306 20 + 131892 GCGT----TGTAAAGAAGATACTG s panTro5.chr5 5270765 20 - 181907262 GCGT----TGTAAAGAAGATACTG i panTro5.chr5 C 0 C 0 s panPan2.chr5 5533235 20 - 183735486 GCGT----TGTAAAGAAGATACTG i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1630959 20 + 3967317 GCGT----TGTAAAGAAGATGCTG i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4482997 20 + 163208435 GGGT----TGTAAAGAAGATATTG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5715692 20 - 180051392 GGGT----TGTAAAGAAGATATTG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5907482 20 - 181584905 GGGT----TGTAAAGAAGATATTG i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 936566 20 - 16193990 GGGT----TGTAAAGAAGATATTG i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1753576 20 - 21434487 GGGT----TGTAAAGAAGATACTG i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4722439 20 - 82825804 GGGT----TGTAAAGAAGATATTG i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 217783 20 + 2521317 GGGT----TGTAAAGAAGATACTG i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1708869 20 - 2415367 GGGT----TGTAAAGAAGATATTG i colAng1.NW_012115755v1 C 0 C 0 s saiBol1.JH378186 2178729 20 + 10068113 GGCT----TGTAAAGAAGATACTG i saiBol1.JH378186 I 2 C 0 s cebCap1.NW_016107999v1 34490 20 - 709587 GGCT----TGTAAAGCAGATACTG i cebCap1.NW_016107999v1 I 2 C 0 s proCoq1.NW_012152163v1 706720 20 - 940639 GGGT----TGTAAAGAACATACTG i proCoq1.NW_012152163v1 C 0 C 0 s otoGar3.GL873522 1206944 24 + 48283576 GGGTTGTATGTATAGAACATATTg i otoGar3.GL873522 C 0 I 564 s canFam3.chr4 37155133 20 + 88276631 AGGT----TATAAAGAAGACAGTG i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 225273 15 - 960158 ---------GCAAAGAAGATAGGT i dasNov3.JH562710 C 0 C 0 e mm10.chr13 65966025 1395 - 120421639 I e calJac3.chr2 64048956 1835 + 204313951 I e aotNan1.NW_018501968v1 1129131 6414 - 2246441 I a score=33497.000000 s hg38.chr5_KI270795v1_alt 22326 3 + 131892 TAG s panTro5.chr5 5270785 3 - 181907262 TAG i panTro5.chr5 C 0 C 0 s panPan2.chr5 5533255 3 - 183735486 TAG i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1630979 3 + 3967317 TAG i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4483017 3 + 163208435 TAG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5715712 3 - 180051392 TAG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5907502 3 - 181584905 TAG i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 936586 3 - 16193990 TAG i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1753596 3 - 21434487 TAG i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4722459 3 - 82825804 TAG i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 217803 3 + 2521317 TAG i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1708889 3 - 2415367 TAG i colAng1.NW_012115755v1 C 0 C 0 s saiBol1.JH378186 2178749 3 + 10068113 TAG i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 34510 3 - 709587 TAA i cebCap1.NW_016107999v1 C 0 C 0 s proCoq1.NW_012152163v1 706740 3 - 940639 TAg i proCoq1.NW_012152163v1 C 0 I 656 s otoGar3.GL873522 1207532 3 + 48283576 CAA i otoGar3.GL873522 I 564 C 0 s canFam3.chr4 37155153 3 + 88276631 GAG i canFam3.chr4 C 0 I 1 s dasNov3.JH562710 225288 3 - 960158 TAG i dasNov3.JH562710 C 0 C 0 e mm10.chr13 65966025 1395 - 120421639 I e calJac3.chr2 64048956 1835 + 204313951 I e aotNan1.NW_018501968v1 1129131 6414 - 2246441 I a score=322181.000000 s hg38.chr5_KI270795v1_alt 22329 36 + 131892 ---CCTTG--A----AAAGA---------GGATGGG--ATTTGGAGAAAATGAATA s panTro5.chr5 5270788 36 - 181907262 ---CCTTG--A----AAAGA---------GGATGGG--ATTTGGAGAAAATGAATA i panTro5.chr5 C 0 C 0 s panPan2.chr5 5533258 36 - 183735486 ---CCTTG--A----AAAGA---------GGATGGG--ATTTGGAGAAAATGAATA i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1630982 36 + 3967317 ---CCTTG--A----AAAGA---------GGATGGG--ATTTGGAGAAAATGAATA i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4483020 36 + 163208435 ---CCTTG--A----AAAGG---------GGATGGG--ATTTGGAGAAAATGAATA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5715715 36 - 180051392 ---CCTTG--A----AGAGG---------GGATGGG--ATTTGGAGAAAATGAACA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5907505 36 - 181584905 ---CCTTG--A----AGAGG---------GGATGGG--ATTTGGAGAAAATGAACA i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 936589 36 - 16193990 ---CCTTG--A----AGAGG---------GGATGGG--ATTTGGAGAAAATGAACA i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1753599 36 - 21434487 ---CCTTG--A----AAAGG---------GGATGGG--ATTTGGAGAAAATGAGCA i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4722462 36 - 82825804 ---CCTTG--A----AGAGG---------GGATGGG--ATTTGGAGAAAATGAACA i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 217806 36 + 2521317 ---CCTTG--A----AAAGG---------GGATGGG--ATTTGGAGAAAATGAACA i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1708892 36 - 2415367 ---CCTTG--A----AAAGG---------GAATGGG--ATTTGGAGAAAATGAACA i colAng1.NW_012115755v1 C 0 C 0 s saiBol1.JH378186 2178752 36 + 10068113 ---TCTTG--A----GAAGG---------AGATGGG--ATTTGGAGAAAATGAATA i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 34513 32 - 709587 ---TCTTG--A----AAAGG-------------GGG--ATTTGGAGAAACTGAATT i cebCap1.NW_016107999v1 C 0 C 0 s otoGar3.GL873522 1207535 40 + 48283576 ---CCCTGATA----AAAGG---------GGATGGGTTGTGTGGAGAAAATGAGTA i otoGar3.GL873522 C 0 C 0 s canFam3.chr4 37155157 39 + 88276631 ---CTTTA--AGAAGAAAGG---------GAGCGGG--AATTGGACAAAG-AAATA i canFam3.chr4 I 1 C 0 s dasNov3.JH562710 225291 47 - 960158 CCTTTTTA--A----AAAGGAGTGGGATGGGATGGG--ATTTGGA-AAAATGAATA i dasNov3.JH562710 C 0 I 697 e mm10.chr13 65966025 1395 - 120421639 I e calJac3.chr2 64048956 1835 + 204313951 I e proCoq1.NW_012152163v1 706743 656 - 940639 I e aotNan1.NW_018501968v1 1129131 6414 - 2246441 I a score=4928.000000 s hg38.chr5_KI270795v1_alt 22365 1 + 131892 T s panTro5.chr5 5270824 1 - 181907262 T i panTro5.chr5 C 0 C 0 s panPan2.chr5 5533294 1 - 183735486 T i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1631018 1 + 3967317 T i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4483056 1 + 163208435 T i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5715751 1 - 180051392 T i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5907541 1 - 181584905 T i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 936625 1 - 16193990 T i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1753635 1 - 21434487 T i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4722498 1 - 82825804 T i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 217842 1 + 2521317 T i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1708928 1 - 2415367 T i colAng1.NW_012115755v1 C 0 C 0 s saiBol1.JH378186 2178788 1 + 10068113 T i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 34545 1 - 709587 A i cebCap1.NW_016107999v1 C 0 C 0 s otoGar3.GL873522 1207575 1 + 48283576 T i otoGar3.GL873522 C 0 C 0 s canFam3.chr4 37155196 1 + 88276631 A i canFam3.chr4 C 0 C 0 e mm10.chr13 65966025 1395 - 120421639 I e calJac3.chr2 64048956 1835 + 204313951 I e proCoq1.NW_012152163v1 706743 656 - 940639 I e dasNov3.JH562710 225338 697 - 960158 I e aotNan1.NW_018501968v1 1129131 6414 - 2246441 I a score=63200.000000 s hg38.chr5_KI270795v1_alt 22366 7 + 131892 TTGACAA s panTro5.chr5 5270825 7 - 181907262 TTGACAA i panTro5.chr5 C 0 C 0 s panPan2.chr5 5533295 7 - 183735486 TTGACAA i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1631019 7 + 3967317 TTGACAA i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4483057 7 + 163208435 TTGACAA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5715752 7 - 180051392 TTGACAC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5907542 7 - 181584905 TTGACAG i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 936626 7 - 16193990 TTGACAC i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1753636 7 - 21434487 TTAACAC i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4722499 7 - 82825804 TTGACAC i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 217843 7 + 2521317 TTGACAC i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1708929 7 - 2415367 TTGACAC i colAng1.NW_012115755v1 C 0 C 0 s saiBol1.JH378186 2178789 7 + 10068113 TTGACAC i saiBol1.JH378186 C 0 I 2 s cebCap1.NW_016107999v1 34546 7 - 709587 TCGACAC i cebCap1.NW_016107999v1 C 0 I 2 s otoGar3.GL873522 1207576 7 + 48283576 TTAGCAT i otoGar3.GL873522 C 0 C 0 s canFam3.chr4 37155197 7 + 88276631 TTAACAC i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 226035 7 - 960158 TTAACAC i dasNov3.JH562710 I 697 C 0 e mm10.chr13 65966025 1395 - 120421639 I e calJac3.chr2 64048956 1835 + 204313951 I e proCoq1.NW_012152163v1 706743 656 - 940639 I e aotNan1.NW_018501968v1 1129131 6414 - 2246441 I a score=1646458.000000 s hg38.chr5_KI270795v1_alt 22373 180 + 131892 TTATTTTTTATCACCCATTTGTAGAGCTAAGGCCATTT----A-----ACTTTCAGGAACACTAAACTGGAAACTATTCAGCCAATATTTATACAGATTTACTAACAGTTTACATGTTTG-------GGA------TGGTTAGTGATGCAGAGCCATAAGTTGTTGAATTTTAAGACATCCGGCAAGAGGCATAAGTCGTTC s panTro5.chr5 5270832 180 - 181907262 TTATTTTTTATCACCCATTTGTAGAGCTAAGGCCATTT----A-----ACTTTCAGGAACACTAAACTGGAAACTATTCAGCCAATATTTATACAGATTTACTAACAGTTTACATGTTTG-------GGA------TGGTTAGTGATGCAGAGCCGTAAGTTGTTGAATTTTAAGACATCCGGCAAGAGGCATAAGTCATTC i panTro5.chr5 C 0 C 0 s panPan2.chr5 5533302 180 - 183735486 TTATTTTTTATCACCCATTTGTAGAGCTAAGGCCATTT----A-----ACTTTCAGGAACACTAAACTGGAAACTATTCAGCCAATATTTATACAGATTTACTAACAGTTTACATGTTTG-------GGA------TGGTTAGTGATGCAGAGCCGTAAGTTGTTGAATTTTAAGACATCCGGCAAGAGGCATAAGTCATTC i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1631026 180 + 3967317 TTATTTTTTATTACCCATTTGTAGAGCTAAGGCCGTTT----A-----ACTTTCAGGAACACTAAACTGGAAACTATTCAGCCAATATTTATACAGATTTACTAACAGTTTACATGTTTG-------GGA------TGGTTAGTGATGCAGAGCCATAAGTTGTTGAATTTTAAGACATCCAGCAAGAGGCATAAGTCGTTC i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4483064 180 + 163208435 TTATTTTTTATTACCCATTTGTAGAGCTAAGGCCATTT----A-----ACTTTCAGGAACACTAAACTGGAAACTATTCAGCCAATATTTATACAGATTTACTAACAGTTTACATGTTTG-------GGA------TGGTTAGTGATGCAGAGCCATAAGTTGTTGAATTTTAAGACATCCGGCAAGAGGCATAAATCGTTG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5715759 176 - 180051392 TTATTTTTTATT----ATTTGTAGAGCTAAGGCCATTT----A-----ACTTTCAGGAACACTAAAATGGAAACTATTTAGCCAGTGTTTATATAGATTTACTAACAGTTTACATGGTTG-------GGA------TGGTTAGTGATGAAGAGCCATAAGTTGTTGAATTTTAAGACATCCGGCAAgaggcataagtcattg i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5907549 176 - 181584905 TTATTTTTTATT----ATTTGTAGAGCTAAGGCCATTT----A-----ACTTTCAGGAACACTAAAATGGAAACTATTTAGCCAGTGTTTATATAGATTTACTAACAGTTTACATGTTTG-------GGA------TGGTTAGTGATGAAGAGCCATAAGTTGTTGAATTTTAAGACATCCGGCAAGAGGCATAAGTCATTG i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 936633 176 - 16193990 TTATTTTTTATT----ATTTGTAGAGCTAAGGCCATTT----A-----ACTTTCAGGAACACTAAAATGGAAACTATTTAGCCAGTGTTTATATAGATTTACTAACAGTTTACATGTTTG-------GGA------TGGTTAGTGATGAAGAGCCATAAGTTGTTGAATTTTAAGACATCCGGCAAgaggcataagtcattg i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1753643 176 - 21434487 TTATTTTTTATT----ATTTGTAGAGCTAAGGCCATTT----A-----ACTTTCAGGAACACTAAACTGGAAACTATTTAGCCAATGTTTATATAGATTTACTAACAGTTTACGTGTTTG-------GGA------TGGTTAGTGATGAAGAGCCATAAGTTGTTGAATTTTAAGACATCCGGCAAgaggcataagtcattg i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4722506 176 - 82825804 TTATTTTTTATT----ATTTGTAGAGCTAAGGCCATTT----A-----ACTTTCAGGAACACGAAACTGGAAACCATTTGGCCAATGTTTATATAGATTTACTAACAGTTTACATGTTTG-------GGA------TGGTTAGTGATGAAGAGCCATAAGTTGTTGAATTTTAAGACATCCGGCAAGAGGCATAAGTCATTG i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 217850 176 + 2521317 TTATTTTTTATT----ATTTGTAGAGCTAAGGCCATTT----A-----ACTTTCAGGAACACTAAACTGGAAACTATTTAGCCAATGTTTATATAGATTTACTAACAGTTTACGTGTTTG-------GGA------TGGTTAGTGATGAAGAGCCATAAGTCGTTGAATTTTAAGACATCCGGCAAgaggcataagtcattg i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1708936 176 - 2415367 TTATTTTTTATT----ATTTGTAGAGCTAAGGCCATTT----A-----ACTTTCAGGAACACTAAACTGGAAACTATTTAGCCAATGTTTATATAGATTTACTAACAGTTTACATGTTTG-------GGA------TGGTTAGTGATGAAGAGCCATAAGTTGTTGAATTTTAAGACATCCGGCAAgaggcataagtcattg i colAng1.NW_012115755v1 C 0 C 0 s saiBol1.JH378186 2178798 178 + 10068113 TTATTTTTTATTACCCATCGGTAGAGCTAAGGCTATTT----A-----ACTTTCAGGAACACTGAACTGGAAACTATTCAGCCAATGAT--TACAGATTTACTAAGAGTTTACATGTTTG-------GGA------TGGTTAGTGATACAGAGCCGTAAGTTGTTGAATTTGAAGACATCCAGCAAGAGGCGTAAGTCGTTG i saiBol1.JH378186 I 2 C 0 s cebCap1.NW_016107999v1 34555 175 - 709587 TTA---TTTATTACCCATTGGTAGAGCTAAGGCCATTT----A-----ACTTTCAGGAACACTAAACTGGAAACTATTCAGCCAATGAT--TACAGATTTACTAAGAGTTTACATGTTTG-------GGA------TGGTTAGTGATACAGAGCCATGAGTTGTTGAATTTGAAGACATCCAGCAAgaggcataagtcgttg i cebCap1.NW_016107999v1 I 2 C 0 s aotNan1.NW_018501968v1 1135545 142 - 2246441 TTATTTTTTATTACCCATTGGTAGAGCTAAGGCTATTT----A-----ACTTTCAGGAACACTAAACTGGAAACtattcagccaatgat--tatagatttactaagagtttacatgtttg-------gga------tgtttagtgatacagagc------------------------------------cataagtcgttg i aotNan1.NW_018501968v1 I 6414 C 0 s otoGar3.GL873522 1207583 179 + 48283576 TTATTGTTTAGTACCCATTTATATAGCTAGACCCCTTTTATCA-----GCATTTAGGGAGATTAAAG-GGAAAATACTCAGACAACGAT--GACCAATTTACTAGCAGTTTATGTGTTTGACGTAATGGAACATATTGGTTGACGTAATGGAACAACATGCGGTTG-------------CCAACATGGAACATAGGTTAC-- i otoGar3.GL873522 C 0 C 0 s canFam3.chr4 37155204 143 + 88276631 TTATTTTTTAGTGCCCATTTATAGAGCTAAGACCCATT-GTTA-----GCATTTAGGGACACCAAATTTAAAACTATTT----AATGATT-TACAAATTTACTAGCAGTTTACATGTTT--------GAA------TGTTTGCTCAAATGGGGCCGTGAGCTGTTGAA---------------------------------- i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 226042 168 - 960158 CCATTTTTCAGTACCCTTTTATATAACAAAGGCCTTTT----GTTAACATCTTTAGGAATACTAATTTGAAAACTATTCATAAAATATAT-TGCAAATTTTCTAGCAGTTTACTTTTTTG-------AAA------TTGCTCCTCAGATGGAGCTGTAAACTGTTTTTACTCAATACATCCGGCAT---------------- i dasNov3.JH562710 C 0 C 0 e mm10.chr13 65966025 1395 - 120421639 I e calJac3.chr2 64048956 1835 + 204313951 I e proCoq1.NW_012152163v1 706743 656 - 940639 I a score=1675236.000000 s hg38.chr5_KI270795v1_alt 22553 175 + 131892 AATTTTAAGACCTCTAGCATCTCACTCTTTTACGACTTAGAAGAAGCAGACCTGCTTGTGAAAACATGCCCACCTGACCAGCAGCGT--C--A--GTGA-C------AGAGTCACCGG-GTACAACTTGCC-----------C-----------------------------------------------------GCTGT------------cagg----------------------------------------------------------gaccactgggg-caccatagatc-taccaagaacaagtt--gataaatttac s panTro5.chr5 5271012 175 - 181907262 AGTTTTAAGACATCTGGCATCTCACTCTTTTATGACTTACAAGAAGCAGACCTGCTTGTGAAAACATGCCCACCTGACCAGCAGCAT--C--A--GTGA-C------AGAGTCACCGG-GTACAACTTGCC-----------C-----------------------------------------------------GCTGT------------cagg----------------------------------------------------------gaccactgggg-caccatagatc-taccaagaacaagtt--gataaatttac i panTro5.chr5 C 0 C 0 s panPan2.chr5 5533482 175 - 183735486 AGTTTTAAGACATCTGGCATCTCACTCTTTTATGACTTACAAGAAGCAGACCTGCTTGTGAAAACATGCCCACCTGACCAGCAGCGT--C--A--GTGA-C------AGAGTCACCGG-GTACAACTTGCC-----------C-----------------------------------------------------GCTGT------------cagg----------------------------------------------------------gaccactgggg-caccatagatc-taccaagaacaagtt--gataaatttac i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1631206 173 + 3967317 AATTTTAAGACATCCAGCATCTCACTCTTTTACGACTTACAAGAAGCAGACCTGCTTGTGAAAACATGCCCACCTGACCAGCAGCGT--C--A--GTGA-C--------AGTCACCGG-GTACAACTTGCC-----------C-----------------------------------------------------GCTGT------------cagg----------------------------------------------------------gaccactgggg-caccatagatc-taccaagaacaagtt--gataaatttac i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4483244 173 + 163208435 AATTTTAAGACATCTAGCATCTCATTC--TTACAACTTACAAGAAGCAGACCTGCGTGTGAAAACATGCCCACCTGACCAGCAGTGT--C--A--GTGA-C------AGAGTCACCGG-GTACAACTTGCC-----------C-----------------------------------------------------GCTGT------------cagg----------------------------------------------------------gaccactggga-caccatggatc-taccaagaacaagtt--gataaatttac i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5715935 175 - 180051392 aattttaagacatctagtatctcactcttttaccacttacaagaagcagacCTGCGTGTGAAAACATGCCCACCTGACCAGCAGTGT--C--A--GTGG-C------AGAGTCACCGG-GTACCACTTGCC-----------C-----------------------------------------------------GCTGT------------cagg----------------------------------------------------------gaccactgggg-caccatgggtc-tagcaagaacaagtt--gacaaattccc i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5907725 175 - 181584905 AATTTTAAGACATCTAGTATCTCACTCTTTTACCACTTACAAGAAGCAGACCTGCGTGTGAAAACATGCCCACCTGACCAGCAGTGT--C--A--GTGG-C------AGAGTCACCGG-GTACCACTTGCC-----------C-----------------------------------------------------GCTGT------------cagg----------------------------------------------------------gaccactgggg-caccatgggtc-tagcaagaacaagtt--gacaaattccc i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 936809 175 - 16193990 aattttaagacatctagtatctcactcttttaccacttacaagaagcagacCTGCGTGTGAAAACATGCCCACCTGACCAGCAGTGT--C--A--GTGG-C------AGAGTCACCGG-GTACCACTTGCC-----------C-----------------------------------------------------GCTGT------------cagg----------------------------------------------------------gaccactgggg-caccatgggtc-tagcaagaacaagtt--gacaaattccc i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1753819 175 - 21434487 aattttaagacatctagtatctcactcttttaccacttacaagaagcagacCTGCGTGTGAAAACATGCCCACCTGACCAGCAGTGT--C--A--GTGG-C------AGAGTCACCAG-GTACAACTTGCC-----------C-----------------------------------------------------GCTGT------------cagg----------------------------------------------------------gaccactgggg-caccatgggtc-tagcaagaacaagtt--gataaattccc i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4722682 175 - 82825804 AATTTTAAGACATCTAGTATCTCACTCTTTTGCCACTTACAAGAAGCAGACCTGCGTGTGAAAACATGCCCACCTGACCAGCAGTGT--C--A--GTGG-C------AGAGTCACCGG-GTACAACTTGCC-----------C-----------------------------------------------------GCTGT------------cagg----------------------------------------------------------gaccactgggg-caccatgggtc-taccaagaacaagtt--gataaattctc i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 218026 175 + 2521317 aattttaagacatctagtatctcactcttttaccacttacaagaagcagacCTGCGTGTGAAAACATGCCCACCTGACTAGCAGTGT--C--A--GTGG-C------AGAGTCACCGG-GTACAACTTGCC-----------C-----------------------------------------------------GCTGT------------cagg----------------------------------------------------------gaccactgggg-caccatgggtc-tagcaagaacaagtt--gataaattccc i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1709112 175 - 2415367 aattttaagacatctagtatctcactcttttaccacttacaagaagcagacCTACGTGTGGAAACATGCCCACCTGACCAGCAGTGT--C--A--GTGG-C------AGAGTCACTGG-GTACAGCTTGCC-----------C-----------------------------------------------------GCTGT------------cagg----------------------------------------------------------gaccattgggg-caccatgggtc-taccaagaacaagtt--gataaattctc i colAng1.NW_012115755v1 C 0 C 0 s saiBol1.JH378186 2178976 174 + 10068113 AATTATAACACGTCCAGCATCATAGTCTTTAAACACTTAGAAGAAGCAGACCTGCATGTGAAAACGTGCCCACCTGATCAGCAGTGT--C--A--GTGA-T------AGAGTCACCAG-GTACAACTTGCC-----------C-----------------------------------------------------GCTGT------------cagg----------------------------------------------------------gaccactggg--caccatggatc-taccaaggacgagtt--gacaaattccc i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 34730 175 - 709587 aattataagacatccagcctcttagtctttaaccacttacaagaagcagacCTGCATGTGAAAACATGCCCACCTGACCAGCAGTGT--C--A--GTGATT------AGAGTCACCAG-GTACAACTTGCC-----------T-----------------------------------------------------GCTGT------------cagg----------------------------------------------------------gaccactggg--caccatggatc-tacaaaggacaagtt--gacaaattccc i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1135687 174 - 2246441 aattataagacatccagcatcttagtctttaaccacttacaagaagcagacCCACGTGTGAAAACGTGCCCACCTGACCAGCAGTGT--C--A--GTGA-T------AGAGTCACCGG-GCACAACTTGCC-----------C-----------------------------------------------------GCTGT------------cagg----------------------------------------------------------gaccactggg--caccatggatc-taccaaggacaagtt--gacaaattcac i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1207762 185 + 48283576 --ATTACAGACATCCAGTATCTGAGTCTTTAGCCATGTAGGAGAAGCAGGCCTAGCTGTGAAAACATGCCCACCACACCAGCAGCACTGC--A--GTAA-T------AAAGTCACGGG-GTACAACTTGCTA--GGCTGGCAT-----------------------------------------------------GACGT------------CAGA----------------------------------------------------------Tatcactcggaccaccatgcatc-tgccaagaacaagtt--gccaaactcac i otoGar3.GL873522 C 0 C 0 s mm10.chr13 65967420 163 - 120421639 AGTTTAAAGACATCTAATATCTTCATCTTTTATACGTCAGGGAAAGAAGA-CTGGGTGTGAGA---TG-TCACTCAAATAGCAGTGC--C--ATGGTAA-CCTTCCAAGAGTCACCTGTGTATGCTTGGTC-------------------------------------------------------------------------------------------------------------------------------------------------ACTACT-----CACTCAGAGGC-TGCCATGAATGA-CT--GGCGAGCCCAT i mm10.chr13 I 1395 C 0 s canFam3.chr4 37155347 239 + 88276631 ---CTCAAGGCATCCATCGCCTCAGTCTTTCAGCCCTTAGAAGAAGCAGG-CAGAGTATAAAAATATGCCCGTCCAGCCAGCAGTGG--CCTA--TCAA-C------AAAGTCACTGG-GTACAATTTACC-----------CAGCCGGAGCATCACCAAGTCCCTCTTCTGGAAATTAAATCACTCTTAAGAAGTGTTGTATCTaaaaggaacagt----------------------------------------------------------ggtcaccgggaccaccttggatt-tgccaagagcaagtt--actaagctcag i canFam3.chr4 C 0 I 3 s dasNov3.JH562710 226210 224 - 960158 ------------------------CTCTTTCACCCCTTCT--GAAGGAGTCCAGAACGTGAAAAGGTGTTTGCTTATTCAGCAGTGT--C--ACAGTAA-C------AGAGTCATTGG-ATACCACTTGCCACCAGTTGGATT-----------------------------------------------------ATTGT------------CAAGGTCTCATCAAGTTCCTCTTGTAATTATTCTTGGGTATTCTGTATCTTCaggaaatggtgatcactgaaaccaccattggttatacaaaaaacaagtctggctaaacccat i dasNov3.JH562710 C 0 C 0 e calJac3.chr2 64048956 1835 + 204313951 I e proCoq1.NW_012152163v1 706743 656 - 940639 I a score=3730680.000000 s hg38.chr5_KI270795v1_alt 22728 326 + 131892 ---atttcctgttaccttcctgataaggttactggaatacaggtcagggaatg--gtgcagatgcagcaaggaatctgtccagtcatctcgggatgtccttgaggaccaaaggaaatctgggct-ggcacaggttgatttgtag-ctggtcatcaactgtacccccaaggg---------ggattaCAGTCAGCTTCGAGAATAGCTGCTCTCCTGAAGT-----ATCACAGTTGAGTTCAGGTTGAGGGTGATCAGGCCTGTGATTG---------TTTATTGAACGTTTATGATGGGCTGTGTCTCCTCCAAAATGACGGCCAAAGTGCTTTGCTCAACACAT----AG----GAGGCCCTC s panTro5.chr5 5271187 326 - 181907262 ---atttcctgttaccttcctgataaggttactggaatacaggtcagggaatt--gtgcggatgcagcaaggaatctgtccggtcatctcgggatgtccttgaggaccaaaggaaatctgggct-ggcacaggttgatttgtag-ctggtcatcaactgtaccccgaaggg---------ggattaCAGTCAGCTTCGAGAATATCTGCTCTCCTGAAGT-----ATCACGGTTGAGTTCAGGTTGAGGGTGATCAGGCCTGTGATTG---------TTTATTGAACGTTTATGATGGGCTGTGTCTCCTCCAAAATGACGGCCAAAGTGCTTTGCTCAACACAT----AG----GAGGCCCTC i panTro5.chr5 C 0 C 0 s panPan2.chr5 5533657 326 - 183735486 ---atttcctgttaccttcctgataaggttactggaatacaggtcagggaatg--gtgcggatgcagcaaggaatctgtccggtcatctcgggatgtccttgaggaccaaaggaaatctgggct-ggcacaggttgatttgtag-ctggtcatcaactgtaccccgaaggg---------ggattaCAGTCAGCTTCGAGAATATCTGCTCTCCTGAAGT-----ATCACGGTTGAGTTCAGGTTGAGGATGATCAGGCCTGTGATTG---------TTTATTGAACGTTTATGATGGGCTGTGTCTCCTCCAAAATGACGGCCAAAGTGCTTTGCTCAACACAT----AG----GAGGCCCTC i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1631379 326 + 3967317 ---atttcctgttaccttcctgataaggttactggaatacaggtcagggaatg--gtgcggatgcagcaaggcatctgtccagtcatctcgggatgtccttgaggaccagaggaaatctgggct-ggcacaggttgatttgtag-ctggtcatcaactgtaccccgaaggg---------ggattaCAGTCAGCTTCGAGAATAGCTGCTCTCCTGAAGT-----ATCACGGTTGAGTTCAGGTTGAGGGTGATCAGGCCTGTGATTG---------TTTATTGAACGTTTATGATGGGCTGTGTCTCCTCCAAAATGACGGCCAAAGTGCTTTGCTCAACACAT----AG----GAGGCCCTC i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4483417 325 + 163208435 ---atttcctgttaccttcctgatacggttactagaatacaggtcagggaatg--gtgcagatgcagcaaggaatctgtccagtcatctc-agatgtccttgaggaccaaaggaaatctgggct-ggcacaggttgatttgtag-ctggtcgtcaactgtaccccgaaagg---------ggattaCAGTCAGCTTCCAGAATAACTGCTCTCCTGAAGT-----ATCATGGTCGAGTTCAGGTTGAGGGTGATCAGGCCTGTGATTG---------TTTATTGAACGTTTATGATGGGCTGTGTGTCCTCCAAAATGACGGCCAAAGTGCTTTGCTCAACACAT----AG----GAGGCCCTC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5716110 326 - 180051392 ---atttcctgttaccttcctgataaggttactagaatacaggtcggggagtg--gggcagatgcagcaaggactctgtccaatcatctcgggatgtccttgaggaccaaaggaaatctgggct-gacacaggttgatctgtag-ctagtcatcaactgtaccctgaaggg---------ggattaCAGTCAGATTCGAGAATAGCTTCTCTCCTGAAGT-----ATCACGGTCGAGCTCAGGTTGAGGGTGATCAGGCCTGTGATTG---------TTTATTGAACGTTTATGATGGGCTGTGTCTCCTCCAAAATGGCGGCCAAAGTGCTTTGCTCAACACAT----GG----GAGGCCCTC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5907900 326 - 181584905 ---atttcctgttaccttcctgataaggttactagaatacaggtcggggagtg--gggcagatgcagcaaggactctgtccaatcatctcgggatgtccttgaggaccaaaggaaatctgggct-gacacaggttgatctgtag-ctagtcatcaactgtaccctgaaggg---------ggattaCAGTCAGATTCGAGAATAGCTTCTCTCCTGAAGT-----ATCACGGTCGAGCTCAGGTTGAGGGTGATCAGGCCTGTGATTG---------TTTATTGAACGTTTATGATGGGCTGTGTCTCCTCCAAAATGGCGGCCAAAGTGCTTTGCTCAACACAT----GG----GAGGCCCTC i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 936984 326 - 16193990 ---atttcctgttacctgcctgataaggttactagaatacaggtcggggagtg--gggcagatgcagcaaggactctgtccaatcatctcgggatgcccttgaggaccaaaggaaatctgggct-gacacaggttgatctgtag-ctagtcatcaactgtaccctgaaggg---------ggattaCAGTCAGATTCGAGAATAGCTTCTCTCCTGAAGT-----ATCCCGGTCGAGCTCAGGTTGAGGGTGATCAGGCCTGTGATTG---------TTTATTGAACGTTTATGATGGGCTGTGTCTCCTCCAAAATGGCGGCCAAAGTGCTTTGCTCAACACAT----GG----GAGGCCCTC i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1753994 327 - 21434487 ---atttcctgttaccttcctgataaggttactagaatacaggtcagggagtg--gggcagatgcagcaaggactctgtccaatcatctcaggatgtccttggagaccaaaggaaatctgggct-ggcacaggttgatttgtagcctggtcatcaactgtaccctgaaggg---------ggattaCAGTCAGATTCGAGAATCGCTTCTCTTCGGAAGT-----ATCACGGTCGAGCTCAGGTTGAGGGTGATCAGGCCCGTGATTG---------TTTATTGAACGTTTATGATGGGCTGTGTCTCCTCCAAAATGGCGGCCAAAGTGCTTTGCTCAACACAT----GG----GAGGCCCTC i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4722857 303 - 82825804 ---atttcctgttaccttcctgataaggttactagaatacaggtcagggagtg--gagcagatgcagCAAGGACTCTGTCCAATCATCTCAGGATGTCCT------------------TGGGCT-GGCACAGGTTGATTTGTAG-CTGGTCATCAGCTGTACCCTGAAGGG---------GGATTACAGTCAGATTTGAGAATAGCTTCTCTTCCGAAGT-----ATCACGGTCGAGCCCAGGTTGAGGGTGATCAGGCCCGTGATTG---------TTTATTGAACGTTTATGATGGGCTGTGTCTCCTCCAAAATGGCGGCCACAGTGCTTTGCTCAACACAT-------------GCCCTC i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 218201 327 + 2521317 ---atttcctgttaccttcctgataaggttactagaatacaggtcagggagtg--gggcagatgcagcaaggactctgtccaatcatctcaggatgtccttggagaccaaaggaaatctgggct-ggcacaggttgatttgtagcctggttattaactgtaccctgaaggg---------ggattaCAGTCAGATTCGAGAATAGCTTCTCTTCGGAAGT-----ATCACGGTCGAGCTCAGGTTGAGGGTGATCAGGCCCGTGATTG---------TTTATTGAACGTTTATGATGGGCTGTGTCTCCTCCAAAATGGCAGCCAAAGTGCTTTGCTCAACACAT----GG----GAGGCCCTC i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1709287 326 - 2415367 ---atttcctgttaccttcctgataaggttactagaacacaggtcagggagtg--gggcagatgcagcaaggactctgtccagtcatctcaggatgtccttgaggaccaaaggaaatctgggct-ggcacaggttgatttgtag-ctggtcatcaactgtaccctgaaggg---------ggattaCAGTCAGATTCGAGAATAGCTTCTCTCCCGAAGT-----ATCACGGTCGAGCTCAGGTTGCGGGTGATCAGGCCCGTGATTG---------TTTATTGAACGTTTATGATGGGCTGTGTCTCCTCCAAAATGGCGGCCAAAGTGCTTTGCTCAACACAT----GG----GAGGCCCTC i colAng1.NW_012115755v1 C 0 I 6 s saiBol1.JH378186 2179150 321 + 10068113 ---atttcctgttaccttcctgttaaggttaccagaatacaggtcagggaatg----gataatatagc-aggaa--tctccaatcatctcaggatgtccttgaggaccaaaggagtcctgggct-ggcacgggttgatttgtag-ctggccatcaactatacccTGAGCGG---------GGATTACAGTCAGCTTGGAGAATAGCTTCTCCCTTGAAGT-----AGCATGGTTGAGTTCAGGTTGAGGGTGATCAGGCCTGTGATTG---------CTTATTGAACGTTTACGATGGGCTGCGTCTCCTCCAAAATGGCGGCCAGAGTGCTTTGCTCAATACGT----CG----GAGGCCCTC i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 34905 325 - 709587 ---atttcctgttaccttcctgataaggctaccagaatacaggtcagggaatg--gtgcagatgcagc-aggaatctctccagtcatctcaggatgtccttgaggaccaaaggagtcctgggct-ggcacaggttgatttgtag-ctggtcatcaactataccctgagggg---------ggattacagtcagcttggagaatagcttctctcctgaagt-----atcacggTTGAGTTCAGGTTGAGGGTGATCAGGCCTGTGATTG---------TTTATTGAACGTTTACGATGGGCTGCGTCTCCTCCAAAATGGTGGCCAGAGTGCTTTGCTCAATACAT----AG----GAGGCCCTC i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1135861 326 - 2246441 ---atttcctgttaccttcctgataaggttactagaatacaggtcagggaatg--gtgcagatgcagcaaggaatctgtccaatcatctcaggatgtccttgaggaccaaaggagtcctaggct-ggcacaggttgatttgtag-ctggtcatcaactataccctgagggg---------ggattacagtcagcctggagaatagcttctCTCCTGAAGT-----ATCATGGTTGAGTTCAGGTTGAGGGTAATCAGGCCTGTGATTG---------TTTATTGAACGTTTACGATGGGCTGCGTCTCCTCCAAAATGGCGACCAGAGTGCTTTGCTCAACACAT----AG----GAGGCCACC i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 707399 328 - 940639 ---atttcctcttaccttcctgatcaggtcacctgaatgcaggtcagggaatg--gtgcagatagagcaaggagtctgtgcagacatcccaggatgtcctccaggaccaaaggaaatcggggct-ggtgcaggttgatttgtac-ctggttgtcaactgtcctctgactag---------ggattaaagtccacttggagaaaagcttctCTCCTGAAATGAGAAATCACTGTAGAGTTCAGATTGGAGATGGTCAGGCCTATGATTG---------TTTATTGGACATTTATGAGGGACTTTGTCTCTTCCAAAAAGCTGGCTAAA-------GCTCAACACACAGAGAG----GAGGCCCTC i proCoq1.NW_012152163v1 I 656 C 0 s otoGar3.GL873522 1207947 321 + 48283576 --------ttcttacctttctgatcaggttcctagaatacaagtgagggaatg--gcgCTGGTAAGGCAAGGAATCTGCCCAGACATGCTTGGATGCTCTCAAGGACCAAAGG--ACCAGTGCT-GGCAAAGGTGGATTTGTAC-CTGGCCATCAACTA--CTTTTACTAGTACAACAACTGACTGAAGTCAACTTGTAGAAAAGTTTCTCTCCTGGTACGAGAAATCACTGTGGAATTCAA---GAAGATGGCCAGGCCTGTAA-------------TTATTGGACATCTGTGAGGGACTCCATCTCTTCCAAAATGGCAGCTAAA-------ACTCAACACACAGAGAG----GAGGCCTTC i otoGar3.GL873522 C 0 C 0 s mm10.chr13 65967583 272 - 120421639 ---GCTTTTCCTAACTCCGCTGTTAATGGCACT--------GGTCAGGGAGTGGGGGGCAGACGGAGCAAAGA--------GAGCACCCGGTGATGCCCTTGA-----------------------GCGCAGGC-AATTAGAAT-GTGGTC-TTAGCTGTAC-CAGAATGG---------GAATCAAAGCCAACCTGAAAAG----TTTTCTCCTGGAATGAGATGTCACTGTGAAATTCATCTTGAAGGTGACGAGGACTGTGACTGGAACAGCTCTTTACTGAATGTTCACGGTGGACCGCATC---TCCAGACTGGCAGCCGAA---------------CAT---------------CCTC i mm10.chr13 C 0 C 0 s canFam3.chr4 37155589 322 + 88276631 ---gttttcttttaccttcttggtaaggctgctaggatacaggtcaggcaatg--gcgcaggtagggcaaggaatctgtcaaaacatctcagcatgtccttgaggcccaaaggagatctggactgggcacaggcccatttgtac-gtggtcatcaactgtacccagagtga---------ggattaaagttaatttggggaaaagtttctCTCCTGAAATGAGATGGCACCATGGAGTTCAGGTTGAAGATGATCAGGCCTATGCTTG---------TTTATTGAACATATTTGATGGTCTGTG-----TCCATAATGGTGGCTGAAGTGCATAGTCGAGTTTCT-------------GCCCTC i canFam3.chr4 I 3 C 0 s dasNov3.JH562710 226434 270 - 960158 gttgtttcctgttactttgttaacaaggttactagaatccggatcagggaatg--gagcagatacagcaaggaatctgtcaaaacatctcag---------------------------------ggcatAGGTAGATTTGTAC-CTTGTCATTGACT--ACCCAGAATGT---------GGATTAAAGTCAAC-TAGAGAAAAGC---------GAGAT-----ATT---GTGGAATTCAGATT-------ATCAGGCCTATGATTA-------------TTGAAAATTTATGACAGACTGCATCTTCTCCAAGGTCGTGGCTTCAGTGCTCCACACAACTCAT----AGTAGAGAGG----- i dasNov3.JH562710 C 0 C 0 e calJac3.chr2 64048956 1835 + 204313951 I a score=174539.000000 s hg38.chr5_KI270795v1_alt 23054 23 + 131892 TCAC-----------------------GCTCTGTTGGGTTGACCAC s panTro5.chr5 5271513 23 - 181907262 TCAC-----------------------GCTCTGTTGGGTTGACCAC i panTro5.chr5 C 0 C 0 s panPan2.chr5 5533983 23 - 183735486 TCAC-----------------------GCTCTGTTGGGTTGACCAC i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1631705 23 + 3967317 TCAC-----------------------GCTCTGTTGGGTTGACCAC i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4483742 23 + 163208435 TCAC-----------------------GCTCTGTTGGGTTGAGCAC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5716436 23 - 180051392 TCAC-----------------------GCTCTGTTGGGTTGACCAC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5908226 23 - 181584905 TCAC-----------------------GCTCTGTTGGGTTGACCAC i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 937310 23 - 16193990 TCAC-----------------------ACTCTGTTGGGTTGACCAC i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1754321 23 - 21434487 TCAC-----------------------ACTCTGTTGGGTTGACCAC i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4723160 23 - 82825804 TCAC-----------------------ACTCTGTTGGGTTGACCAC i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 218528 23 + 2521317 TCAC-----------------------ACTCTGTTGGGTTGACCAC i manLeu1.NW_012103943v1 C 0 C 0 s saiBol1.JH378186 2179471 23 + 10068113 TTGC-----------------------CCTCTGTTGGGTTGCCCAC i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 35230 23 - 709587 TTGC-----------------------CCTCTGTTGCGTTGCCCAC i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1136187 23 - 2246441 TTGC-----------------------CCTCTGTTGAGTTGACCAC i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 707727 25 - 940639 -TCCC-T-------------------GCCTTTGTTGGGTTGACCAA i proCoq1.NW_012152163v1 C 0 C 0 s otoGar3.GL873522 1208268 22 + 48283576 -TCC-----------------------TCTTTGTTGGCTGGACCAA i otoGar3.GL873522 C 0 C 0 s mm10.chr13 65967855 23 - 120421639 ----ACT-------------------GTCTTTGTTGGTTTAACTGA i mm10.chr13 C 0 C 0 s canFam3.chr4 37155911 41 + 88276631 -----TTATCCTGTTTGTAGAAAGGAATCTTTGTGGGATTGACCAA i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 226704 19 - 960158 ---------------------------AATGTGTTGGATTGATCAA i dasNov3.JH562710 C 0 C 0 e calJac3.chr2 64048956 1835 + 204313951 I e colAng1.NW_012115755v1 1709613 6 - 2415367 I a score=69770.000000 s hg38.chr5_KI270795v1_alt 23077 6 + 131892 AAATTG s panTro5.chr5 5271536 6 - 181907262 AAATTG i panTro5.chr5 C 0 C 0 s panPan2.chr5 5534006 6 - 183735486 AAATTG i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1631728 6 + 3967317 AAATTG i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4483765 6 + 163208435 AAATTG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5716459 6 - 180051392 AAATTG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5908249 6 - 181584905 AAACTG i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 937333 6 - 16193990 AAATTG i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1754344 6 - 21434487 AAATTG i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4723183 6 - 82825804 AAATTG i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 218551 6 + 2521317 AAATTG i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1709619 6 - 2415367 AAATTG i colAng1.NW_012115755v1 I 6 C 0 s saiBol1.JH378186 2179494 6 + 10068113 AGATTG i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 35253 6 - 709587 AGATTG i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1136210 6 - 2246441 AGATTG i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 707752 6 - 940639 AAATTG i proCoq1.NW_012152163v1 C 0 I 28 s otoGar3.GL873522 1208290 6 + 48283576 GAATTA i otoGar3.GL873522 C 0 C 0 s mm10.chr13 65967878 6 - 120421639 AAAGTA i mm10.chr13 C 0 I 4 s canFam3.chr4 37155952 5 + 88276631 -ACGTG i canFam3.chr4 C 0 I 2 s dasNov3.JH562710 226723 6 - 960158 ACAATG i dasNov3.JH562710 C 0 C 0 e calJac3.chr2 64048956 1835 + 204313951 I a score=312017.000000 s hg38.chr5_KI270795v1_alt 23083 34 + 131892 -AACTCATCTG-----GCTAGG-ACTGTACAAGGGAGAGGG-- s panTro5.chr5 5271542 34 - 181907262 -AACTCGTCTG-----GCTAGG-ACTGTACAAGGGAGAGGG-- i panTro5.chr5 C 0 C 0 s panPan2.chr5 5534012 34 - 183735486 -AACTCGTCTG-----GCTAGG-ACTGTACAAGGGAGAGGG-- i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1631734 34 + 3967317 -AACTCGTCTG-----GCTAGG-ACTGTACAAGGGAGAGGG-- i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4483771 34 + 163208435 -AACTCATCTG-----GCTAGG-ACTGTACAAGGGAGAGGG-- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5716465 34 - 180051392 -AATTCGTCTG-----GATAGG-ACTGTACAAGGGAGAGGG-- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5908255 34 - 181584905 -AATTCGTCTG-----GATGGG-ACTGTACAAGGGAGAGGG-- i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 937339 34 - 16193990 -AATTCGTCTG-----GATAGG-ACTGTACAAGGGAGAGGG-- i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1754350 34 - 21434487 -AATTCGTCTG-----GATAGG-ACTGTACAAGGGAGAGGG-- i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4723189 34 - 82825804 -AATTCGTCTG-----GATAGG-ACTGTACAAGGGAGAGGG-- i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 218557 34 + 2521317 -AATTCGTCTG-----GATAGG-ACTGTACAAGGGAGAGGG-- i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1709625 34 - 2415367 -AATTCGTCTG-----GATAGG-ACTGTAGAAGGGAGAGGG-- i colAng1.NW_012115755v1 C 0 C 0 s saiBol1.JH378186 2179500 34 + 10068113 -AACTTGCCTG-----GCTAGG-ACTGTACAAGGGAGAGGG-- i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 35259 34 - 709587 -AGCTTGCCTG-----GCTAGG-ACTGTACAAGGGAGAAGG-- i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1136216 34 - 2246441 -AACTTGCCTG-----GCTAGG-ACTGTACAAGGGAGTCGG-- i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1208296 30 + 48283576 ------TCCTT-----GCTAGGCATTGTACAAGGGAGAGAG-- i otoGar3.GL873522 C 0 I 2 s mm10.chr13 65967888 33 - 120421639 -AGGCCTCTCT-----GCTGGG-CTTGTAC-AGGGAAAGAG-- i mm10.chr13 I 4 I 3 s canFam3.chr4 37155959 35 + 88276631 --AGCTTCCTGTGAGTGCTGGGCATTGtataagaggg------ i canFam3.chr4 I 2 C 0 s dasNov3.JH562710 226729 33 - 960158 AGCTCCCTCTG-----AC-----ATTGTTCAAGGGAGAGAGGG i dasNov3.JH562710 C 0 C 0 e calJac3.chr2 64048956 1835 + 204313951 I e proCoq1.NW_012152163v1 707758 28 - 940639 I a score=2022176.000000 s hg38.chr5_KI270795v1_alt 23117 174 + 131892 ATAAACCAGACCACTGTA---CCTTGGAcctactgtacgggtaaaaact--gg---ttcaaggaggttagagaacttgtccagggtcaaacggtctgtaTATGAGTTTGAAGCC-----CATGTTCCTTTCAT-----------------------------CCCAGCTG----TTTAAGTTTAGCCTAGTCTAGATGTGGCTTAACAGTAACACAGATG s panTro5.chr5 5271576 174 - 181907262 ATAAACCAGACCACTGTA---CCTTGGAcctactgtacgggtaaaaact--gg---ttcaaggaggttagagaacttgtccagggtcaaacggtctgtaTATGAGTTTGAAGCC-----CATGTTCCTTTCAT-----------------------------CCCAGCTG----TTTAAGTTTAGCCTAGTCTAGATGTGGCTTAACAGTAACACAGATG i panTro5.chr5 C 0 C 0 s panPan2.chr5 5534046 174 - 183735486 ATAAACCAGACCACTGTA---CCTTGGAcctactgtacgggtaaaaact--gg---ttcaaggaggttagagaacttgtccagggtcaaacggtctgtaTATGAGTTTGAAGCC-----CATGTTCCTTTCAT-----------------------------CCCAGCTG----TTTAAGTTTAGCCTAGTCTAGATGTGGCTTAACAGTAACACAGATG i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1631768 174 + 3967317 ATAAACCAGACCACTGTA---CCTTGGAcctactgtatgggtaaaaact--gg---ttcaaggaggttagagaacttgtccagggtcaaacggtctgtaTATGAGTTTGAAGCC-----CATGTTCCTTTCAT-----------------------------CCCAGCTG----TTTAAGTTTAGCCTAGTCTAGATGTGGCTTAACAGTAACACAGATG i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4483805 175 + 163208435 ATAAACCAGACCACTGTA---CCTTGGAcctactgtacaggtaaaaact--gg---ttcaaggaggttagagaacttgtccaaggtcaaacggtctgtatatgAGTTTGAAGCC-----CATGTTCCTTTCAT-----------------------------CCCAGCTG---TTTTAAGTTTAGCCTAGTCTAGATGTGGCTTAACAGTAACACAGATG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5716499 174 - 180051392 ATAAACCAGACCACTGTA---CCTCGGACCTACTCTTCAGGTAAAAACT--CG---TTCAACGAGGTTAGAGAACTTGTTCAGGGTCAAACGGTCTGTATATGAGTTTGAAGCC-----CGTGTTCCTTTCAT-----------------------------CCCAGCTG----TTTAAATTCAGCCTAGTCTAGACGTGGCTTCACAGTAACACAGATG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5908289 174 - 181584905 ATAAACCAGACCACTGTA---CCTCGGACCTACTCTTCAGGTAAAAACT--CG---TTCAACGAGGTTAGAGAACTTGTTCAGGGTCAAACGGTCTGTATATGAGTTTGAAGCC-----CGTGTTCCTTTCAT-----------------------------CCCAGCTG----TTTAAATTCAGCCTAGTCTAGACGTGGCTTCACAGTAACACAGATG i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 937373 174 - 16193990 ATAAACCAGACCACTGTA---CCTTGGACCTACTCTTCAGGTAAAAACT--CG---TTCAACGAGGTTAGAGAACTTGTTCAGGGTCAAACGGTCTGTATATGAGTTTGAAGCC-----CGTGTTCCTTTCAT-----------------------------CCCAGCTG----TTTAAATTCAGCCTAGTCTAGATGTGGCTTCACAGTAACACAGATG i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1754384 174 - 21434487 ATAAACCAGACCACTGTA---CCTTGGACCTACTCTTCAGGTAAAAACT--CG---TTCAAGGAGGTTAGAGAACTTGTTCAGGGTCAAACGGTCTGTATATGAGTTTGAAGCC-----CGTGTTCCTTTTAT-----------------------------CCCAGCTG----TTTGAATTCAGCCTAGTCTAGATGTGGCTTCACAGTAACACAGATG i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4723223 174 - 82825804 ATAAACCAGACCACTGTA---CCTTGGACCTACTCTTCAGGTAAAAACT--CG---TTCAGGGAGGTTAGAGAACTTGTTCAGGGTCAAATGGTCTGTATATGAGTTTGAAGCC-----CGTGTTCCTTTCAT-----------------------------TCCAGCTG----TTTCAGTTCAGCCTAGTCTACATGTGGCTTCACAGTAACACAGATG i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 218591 174 + 2521317 ATAAACCAGACCACTGTA---CCTTGGACCTACTCTTCAGGTAAAAACT--CG---TTCAAGGAGGTTAGAGAACTTGTTCAGGGTCAAACGGTCTGTATATGAGTTTGAAGCC-----CGTGTTCCTTTCAT-----------------------------CCCAGCTG----TTTAAATTCAGCCTAGTCTAGATGTGGCTTCACAGTAACACAGATG i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1709659 174 - 2415367 ATAAATCAGACCACTGTA---CCTTGGACCTACTCTTCAGGTAAAAACT--CG---TTCAAGGAGGTTAGAGAACTTGTTCAGGGTCAAACGGTCTGTATATGAGTTTGAAGCC-----CGTGTTCCTTTCAT-----------------------------CCCAGCTG----TTTAAGTTCAGCCTAGTCTAGATGTGGCTTCACAGTAACACAGATG i colAng1.NW_012115755v1 C 0 C 0 s saiBol1.JH378186 2179534 170 + 10068113 ATGAATCAGATCACTGTA---CCTGGGAcctattttacaggtagaaact--gg---ttcaaggaggttagaggagttgtccagggt----caGTCTGTATATGAGTTTGAAGCC-----CATGTTCCTTTCAT-----------------------------CCCAGCTA----TTTAAGTTCAGCCTAGTCTAGATGTGACTTAACAGTAACACAGATG i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 35293 174 - 709587 ATAAATCAGACCACTGTA---CCTGGGAcctattttacaggtagaaact--gg---ttcaaggaggttagggaagttgtccagggtcaaacagTCTGTCTATGAGTTTGAAGCC-----CATGCTCCTTTCAT-----------------------------CCCAGCTG----TTTAAGTTCAGCCTAGTCTAGATGTGGCTTAACAGTAACACAGATG i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1136250 172 - 2246441 ATAAATCAGACCACTGTA---CCTGGGAcctattttgcaggtagaaact--gg---ttcaagtaggttagagaagttgtccagtgtcaaacagTCTG--AATGAGTTTGAAGCC-----CATGTTCCTTTCAT-----------------------------CCCAGCTG----TTTAAGTTCAGCCTAGTCTAGATGTGGCTTAACAGTAACACAGATG i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 707786 192 - 940639 ATAAATCAGACCACTGTGG--CCTTGGAcccattttacaggtgaaaact--aa---ttcagggaggttagggaccttgcccagggccaaactgtctataagtTAGTTTGAAGTC-----CACATTCCTTCCAT-----------TGCACTTGGGTCCAACA-TCCGACTG----TTTAAGTTCTGCCTAGTCCAGATGTAGCTTAACAATAACACAGATT i proCoq1.NW_012152163v1 I 28 I 18 s otoGar3.GL873522 1208328 191 + 48283576 ATAAATCACACCACTGTAAACCCTTGGActcattttaca---gaaaact--gg---ttcatggaggttatggaacttgccgaggaccaaaaggtctgtaagtTAG-TTGAGGTC-----CACATTCCTTCTAC-----------TACACTCAGGTCCAACA-TCCAACTG---TTTTAAGTTCTGCCCAGTCTAGACGCGGTTTAATGATAACACAGATG i otoGar3.GL873522 I 2 C 0 s mm10.chr13 65967924 156 - 120421639 ATGAACCCT-CTGCTGTA---TCC----------------------------G---TTCA--GCAGTTAGGA---CTGTCCAGGATCTGG-GGTCAGTGCATTGTTTTGAAGCC-----CATGTTCCTTCCAC-----------TGTGTTATGAC-------CCTGCCTGGAATGACAGATCTAGCTTCAAGTAGAGGAGACCTAACAGTGGCATAGATA i mm10.chr13 I 3 C 0 s canFam3.chr4 37155994 181 + 88276631 gaagatcagactactata---tcttggacccattttacagatgaaagctgagg---ttcagggaggttggggaacttgccctgggtcacccggtcagtgcgttagtttgaagccccacgcatgagtccaaaat-----------------------------tccaactg----tttAGGTTCAGTCCGATCTTGATGTCTCATACCAATCACACAGATA i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 226762 181 - 960158 ---------------ATA---AATCAGAcctattttatagataaaaaac--tgatatttggtgaggttagggaacttgtcc-gggtcaaatggtcagtaCATTAGTTTGAAGCC-----CATATTACTTTCACAGTGTGTGCTTTACATTTGGATCTAAAATCTCAACTC-------AAGCTCAGTCTAGTCTAGATGTGTCT------TAACACAGATG i dasNov3.JH562710 C 0 C 0 e calJac3.chr2 64048956 1835 + 204313951 I a score=140156.000000 s hg38.chr5_KI270795v1_alt 23291 14 + 131892 TAGAGGCTTAGGGT- s panTro5.chr5 5271750 14 - 181907262 TAAAGGCTTAGGGT- i panTro5.chr5 C 0 C 0 s panPan2.chr5 5534220 14 - 183735486 TAAAGGCTTAGGGT- i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1631942 14 + 3967317 TAAAGGCTTAGGGT- i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4483980 14 + 163208435 TAAAGGCTTAGGGT- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5716673 14 - 180051392 TAAAGGCTTAGGGT- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5908463 14 - 181584905 TAAAGGCTTAGGGT- i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 937547 14 - 16193990 TAAAGGCTTAGGGT- i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1754558 14 - 21434487 TAAAGGCTTAGGGT- i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4723397 14 - 82825804 TAAAGGCTTAGGGT- i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 218765 14 + 2521317 TAAAGGCTTAGGGT- i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1709833 14 - 2415367 TAAAGGCTTAGGGT- i colAng1.NW_012115755v1 C 0 C 0 s saiBol1.JH378186 2179704 14 + 10068113 TAAAGGCTTAGCAT- i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 35467 14 - 709587 TAAAGGCTTAGCAT- i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1136422 14 - 2246441 TAAAAGCTTAGCAT- i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1208519 9 + 48283576 TAAAGGCAT------ i otoGar3.GL873522 C 0 C 0 s mm10.chr13 65968080 13 - 120421639 -TAAACCTCAGAAA- i mm10.chr13 C 0 I 1 s canFam3.chr4 37156175 14 + 88276631 TAAAGGCTTGGGAT- i canFam3.chr4 C 0 I 1 s dasNov3.JH562710 226943 15 - 960158 TCAAGACTTAAGAGT i dasNov3.JH562710 C 0 C 0 e calJac3.chr2 64048956 1835 + 204313951 I e proCoq1.NW_012152163v1 707978 18 - 940639 I a score=1237252.000000 s hg38.chr5_KI270795v1_alt 23305 103 + 131892 CTTAGGAGTTTG---ACCATCAACA-TGGGATTCA----CCTGGTTCTTTGTGGGAAAGATGTCACA------CTGCTGATGGGCAGAAGCCAGGGGACAGAGAAGCTTTAGCTTGG s panTro5.chr5 5271764 103 - 181907262 CTTAGGAGTTTG---ACCATCAACA-TGGGATTCA----CCTGGTTCTTTGTGGGAACGATGTCACA------CTGCTGATGGGCAGAAGCCAGGGGACAGAGAAGCTTTAGCTTGG i panTro5.chr5 C 0 C 0 s panPan2.chr5 5534234 103 - 183735486 CTTAGGAGTTTG---ACCATCAACA-TGGGATTCA----CCTGGTTCTTTGTGGGAACGATGTCACA------CTGCTGATGGGCAGAAGCCAGGGGACAGAGAAGCTTTAGCTTGG i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1631956 103 + 3967317 CTTAGGAGTTTG---ACCATCAACA-TGGGATTCA----CCTGGTTCTTTGTGGGAAAGATGTCACA------CTGCTGATGGGCAGAAGCCAGGGGACAGAGAAGCTTTAGCTTGG i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4483994 103 + 163208435 CTTAGGAGTTTG---ACCATCAACA-TGGGATTCA----CCTGGTTCTTTGTGGGAACGATGTCACA------CTGCTGATGGGCAGAAGCCAGGGGACAGAGAAGCTTTAGCTTGG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5716687 103 - 180051392 CTTAGGAGTTTG---ACCATCAACA-TGGGATTCA----CCTGGTTCTTTGTGGGAAAGTTGTCACA------TTGCTGATGGGCAGAAACCAAGGGACAGAGAAGCTTTAGCTTGG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5908477 103 - 181584905 CTTAGGAGTTTG---ACCATCAACA-TGGGATTCA----CCTGGTTCTTTGTGGGAAAGTTGTCACA------TTGCTGATGGGCAGAAACCAAGGGACAGAGAAGCTTTAGCTTGG i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 937561 103 - 16193990 CTTAGGAGTTTG---ACCATCAACA-TGGGATTCA----CCTGGTTCTTTGTGGGAACGTTGTCACA------TTGCTGATGGGCAGAAACCAAGGGACAGAGAAGCTTTAGCTTGG i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1754572 103 - 21434487 CTTAGGAGTTTG---ACCATCAACA-TGGGATTCA----CCTGGTTCTTTGTGGGAAAGTTGTCACA------TTGCTGATGGGCAGAAACCAAGGGACAGAGAAGCTTTAGCTTGG i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4723411 103 - 82825804 CTTAGGACTTTG---ACCATCAACA-TGGGATTCA----CCTGGTTCTTTGTGGGAAAGTTGTCACA------TTGCTGATGGGCAGAAACCAAGGGACAGAGAAGCTTTAGCTTGG i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 218779 103 + 2521317 CTTAGGAGTTTG---ACCATCAACA-TGGGATTCA----CCTGGTTCTTTGTGGGAAAGTTGTCACA------TTGCTGATGGGCAGAAACCAAGGGACAGAGAAGCTTTAGCTTGG i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1709847 103 - 2415367 CTTAGGAGTTTG---ACCACCAACG-TGGGATTCA----CCTCGTTCTTTGTGGGAAAGTTGTCACA------TTGCTAATGGGCAGAAACCAAGGGACAGAGTAGCTTTAGCTTGG i colAng1.NW_012115755v1 C 0 C 0 s saiBol1.JH378186 2179718 107 + 10068113 CTTAGGAGTTTG---ACCATCAACA-CGGGATTCA----TCTGGTTCTTTGTGGGAAAG--GTCACACTGCTTCTGCTGATTGGCAGAAGCCAGGGGACAGAGAAGCTTTAGCTTGG i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 35481 101 - 709587 CTTAGGAGTTTG---ACCATCAACA-CGGAATTCA----TCTGGTTCTTTGTGGGAAAG--GTCACA------CTGCTGATGGGCAGAAGCCAGGGGACAGAGAAGCTTTAGCTTGG i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1136436 101 - 2246441 CTTAGGAGTTTG---ACCATCAACA-TAGGATTCA----TCTGGTTCTTTGTGGGAAAG--GTCACA------CTGCTGATGGGCAGAAGCCAGGGGACAGAGAAACTTTAGCTTGG i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 707996 101 - 940639 CTTAGGAGTTTT---ACCATCAACA-TTGGATTCG----TCTGGTTCTTTGTGGGAAAGGTGTCACG------CTGCTAATGGGCAGAAACCAGAGA--AGAGAAGCTCTAGCTTGG i proCoq1.NW_012152163v1 I 18 I 196 s otoGar3.GL873522 1208528 99 + 48283576 TTTAGAAGTTTT---ACCGTTAACA-TTAACATTGGGAATCTTGTTCTCTGTGGGAAAGGTGTCAGG------ATGCCTTTGAGCAGAAACCAGAGA--GGAG----CTTA--TTGG i otoGar3.GL873522 C 0 I 1 s mm10.chr13 65968094 86 - 120421639 TGTAGGGGTTTT---ACTCTCCACATTGGGAGTCA----CATGGTTCTACGTGGGACAGGTGCCAGT------GTGTTCACTGT--GTACTCAGAGAAGAG---------------- i mm10.chr13 I 1 C 0 s canFam3.chr4 37156190 102 + 88276631 CTTAGAAGACCGTGCACCATCAACACTGGATTTCA----TGTGGTACTTTGTGGCAAAGCTGTCATG------ATGCTGATGGGCAGAATCTAGGTGAAAGA-----TTTGGCCTGG i canFam3.chr4 I 1 I 1 s dasNov3.JH562710 226958 104 - 960158 CTCAGGCATTTGTTAACTGTGAACATTGGGAATCT----CCTGATGCATTGTGGGTAAGGTGCC---------TTGCTGATGGGCAGAAACCAGAGAAAAGGGAAGCTTTAGCTTGG i dasNov3.JH562710 C 0 C 0 e calJac3.chr2 64048956 1835 + 204313951 I a score=50309.000000 s hg38.chr5_KI270795v1_alt 23408 6 + 131892 AGACCT s panTro5.chr5 5271867 6 - 181907262 AGACCT i panTro5.chr5 C 0 C 0 s panPan2.chr5 5534337 6 - 183735486 AGACCT i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1632059 6 + 3967317 AGACCT i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4484097 6 + 163208435 AGACCT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5716790 6 - 180051392 AGACCT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5908580 6 - 181584905 AGACCT i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 937664 6 - 16193990 AGACCT i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1754675 6 - 21434487 AGACCT i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4723514 6 - 82825804 AGACCT i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 218882 6 + 2521317 AGACCT i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1709950 6 - 2415367 AGACCT i colAng1.NW_012115755v1 C 0 C 0 s saiBol1.JH378186 2179825 6 + 10068113 AGACCT i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 35582 6 - 709587 AAACCT i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1136537 6 - 2246441 AGACCT i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1208628 5 + 48283576 GGGCT- i otoGar3.GL873522 I 1 I 4 s mm10.chr13 65968180 6 - 120421639 TGAGCA i mm10.chr13 C 0 C 0 s canFam3.chr4 37156293 5 + 88276631 GAACC- i canFam3.chr4 I 1 I 4 s dasNov3.JH562710 227062 6 - 960158 AGAATT i dasNov3.JH562710 C 0 C 0 e calJac3.chr2 64048956 1835 + 204313951 I e proCoq1.NW_012152163v1 708097 196 - 940639 I a score=1340083.000000 s hg38.chr5_KI270795v1_alt 23414 106 + 131892 ---GGA-----AACAACACAT---TCAGGGGAAGAGGGttcatttattcagccagtcactcaacccctctcctgtgccaggcctgactggaacactgagggtacagaggt-gaaGGT---------------------C------------------- s panTro5.chr5 5271873 106 - 181907262 ---GGA-----AACAACACAT---TCAGGGGAAGAGGGttcatttattcagccagtcactcaacccctctcctgtgccaggcctgactggaacactgagggtacagaggt-gaaGGT---------------------C------------------- i panTro5.chr5 C 0 C 0 s panPan2.chr5 5534343 106 - 183735486 ---GGA-----AACAACACAT---TCAGGGGAAGAGGGttcatttattcagccagtcactcaacccctctcctgtgccaggcctgactggaacactgagggtacagaggt-gaaGGT---------------------C------------------- i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1632065 106 + 3967317 ---GGA-----AACAACACAT---TCAGGGGAAGAGGGttcatttattcagccagtcactcaacccctctcctgtgccaggcctgactgaaacactgagggtacagaggt-gaaGGT---------------------C------------------- i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4484103 106 + 163208435 ---GGA-----AACAACACAT---TCAGGGGAAGAGCGttcatttattcagccagtcactcaacctctctcctgtgccaggcctgactggagcactgagggtacagaggt-gaaGGT---------------------C------------------- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5716796 106 - 180051392 ---GGA-----GACAACGCAT---TAAGGGGAAGAGGGttcatttattcagccagtcactcagcccctctcctgtgccaggcctgactggagcactgagggtacagaggt-gaaGGT---------------------C------------------- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5908586 106 - 181584905 ---GGA-----GACAACGCAT---TAAGGGGAAGAGGGttcatttattcagccagtcactcagcccctctcctgtgccaggcctgactggagcactgagggtacagaggt-gaaGGT---------------------C------------------- i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 937670 106 - 16193990 ---GGA-----AACAACGCAT---TAAGGGGAAGAGGGttcatttattcagccagtcactcagcccctctcctgtgccaggcctgactggagcactgagggtacagaggt-gaaGGT---------------------C------------------- i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1754681 106 - 21434487 ---GGA-----AACAACGCAT---TAAGGGGAAGAGGGttcatttatgcagccagtcactcagcccctctcctgtgccaggcctgactggagcactgagggtacagaggt-gaaGGT---------------------C------------------- i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4723520 106 - 82825804 ---GGA-----AACAACGCAT---TAAGGGGAAGAGGGttcatttattcagccagtcactcagcccctctcctgtgccaggcctgactggagcactgagggtacagaggt-gaaGGT---------------------C------------------- i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 218888 106 + 2521317 ---GGA-----AACAACGCAT---TAAGGGGAAGAGGGttcatttattcagccagtcactcagcccctctcctgtgccaggcctgactggagcactgagggtacagaggt-gaaGGT---------------------C------------------- i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1709956 107 - 2415367 ---GGA-----AACAACGCAT---TAAGGGGAAGAGGGttcatttattcagccagtcactcagcccctctcctgcgccaggcctgactggagcactgagggtacagaggtggaAGGT---------------------C------------------- i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64050791 106 + 204313951 ---GGA-----AACAACACAT---TAAGGGGAAGAGGGttcatttattcagccagtcactcaacccctatcttgtgctaggcctgactggagcactgagggtacagaggt-gaaGGT---------------------C------------------- i calJac3.chr2 I 1835 C 0 s saiBol1.JH378186 2179831 106 + 10068113 ---GGA-----AACAACACAT---TAAGGGGAAGAGGGttcatttattcagccagtcatttaacccctatcctgtgccagacctgactggagcactgagggtacagaggt-gaaGGT---------------------C------------------- i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 35588 106 - 709587 ---GGA-----AACAACACAT---TAAGGGGAAGAGGGttcatttattcagccagtcactcaacctctatcctgtgccaggcctgactggagcactgagggtacagaggt-gaaGGT---------------------C------------------- i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1136543 106 - 2246441 ---GGA-----AACAACACAT---TAAGGGGAAGAGGGttcatttattcagccagtcactcaacccctatcctgtgccaggcctgactggagcactgagggtacagaggt-gaaGGT---------------------C------------------- i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1208637 126 + 48283576 ---GGAAATATAACAGCACAT---T------AAGAGGGttctttcacccaaccagtcatgcaatacctgtcctgtgccaggcctgagtggagcactgagggcacagatgt-gcagatcagctagtttctctctgggaac------------------- i otoGar3.GL873522 I 4 C 0 s mm10.chr13 65968186 99 - 120421639 ---GGA-----GGCAACAGACAGATGAAGGCGGGAGAGTCC----ACTCAGCC------TTGATACCTATCCTGGGGAGCACCTGAGCGTGGTGCTGACGGCTCAGATGC-ACAGGT---------------------C------------------- i mm10.chr13 C 0 I 1992 s canFam3.chr4 37156302 102 + 88276631 ---GGA-----AATAAGCTAT---GAGGGGCAAGGAGGCtc----attcagccagccactcagcacctaccctgtggcaggcctgggccaggtgctgaaggtacaggtgt-gaagat---------------------c------------------- i canFam3.chr4 I 4 I 24 s dasNov3.JH562710 227068 101 - 960158 GAAGGG-----AATAATACAT---TAAGGGAAAGAGGATTCAT--------CCACTTGCTCAACATCTACCCTAAATGAGGCCTGAAT-------------------TGT-GAAGTT---------------------CAGTCTCCTACCCCAGAAAC i dasNov3.JH562710 C 0 C 0 e proCoq1.NW_012152163v1 708097 196 - 940639 I a score=663577.000000 s hg38.chr5_KI270795v1_alt 23520 54 + 131892 CCACAGCCTGGTGTGCAGATGGTGACAAT-TCA-TGTg--a--gtggtttcattaaaaag s panTro5.chr5 5271979 54 - 181907262 CCACAGCCTGGTGTGCAGATGGTGACAAT-TCA-TGTg--a--gtggtttcattaaaaag i panTro5.chr5 C 0 C 0 s panPan2.chr5 5534449 54 - 183735486 CCACAGCCTGGTGTGCAGATGGTGACAAT-TCA-TGTg--a--gtggtttcattaaaaag i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1632171 54 + 3967317 CCACAGCCTGGTGTGCAGATGGTGACAAT-TCA-TGTg--a--gtggtttcattaaaaag i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4484209 54 + 163208435 CCACAGCCTGGTGTGCAGACGGTGACAAT-TCA-TGTg--a--gtggtttcattaaagag i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5716902 54 - 180051392 CCACAGCCTGGTGTGCAGATGGTGACAAT-TCA-TGTg--a--gtggtttcattaaaaag i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5908692 54 - 181584905 CCACAGCCTGGTGTGCAGATGGTGACAAT-TCA-CGTg--a--gtggtttcattaaaaag i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 937776 54 - 16193990 CCACAGCCTGGTGTGCAGATGGTGACAAT-TCA-TGTg--a--gtggtttcattaaaaag i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1754787 54 - 21434487 CCACAGCCTGGTGTGCAGATGGTGACAAT-TCA-TGTg--a--gtggtttcattaaaaag i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4723626 54 - 82825804 CCACAGCCTGGTGTGCAGATGGTGACAAT-TCA-TGCg--a--gtggtttcattaaaaag i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 218994 54 + 2521317 CCACAGCCTGGTGTGCAGATGGTGACAAT-TCA-TGTg--a--gtggtttcattaaaaag i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1710063 54 - 2415367 CCCCAGCCTGGTGTGCAGATGGTGACAAT-TCA-TGTG--A--GTGGTTTCATTAAAAAG i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64050897 54 + 204313951 CCACAGCCTGGTGTGCAGATGGTGACAAT-TTA-TGTG--A--GTGGTTTCATAAAAAAG i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2179937 54 + 10068113 CCACAGCCTGGTGTGCAGATGGTGGCAAT-TCA-TGTG--A--GTGGTTTCATAAAAAAG i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 35694 54 - 709587 CCACAGCCTGGTATGCAGTTGGCGACAAT-TCC-TGTA--a--gtggtttcataaaaaag i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1136649 54 - 2246441 CCACAACCTGGTGTGCAGATGGTGACAAT-TCA-TGTG--A--GTGGTTTCATAAGAAAG i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1208763 48 + 48283576 ccacaacctaatA---------CGACAATATAG-TGTGATA--GTGGTTCCATGAAAGGG i otoGar3.GL873522 C 0 C 0 s canFam3.chr4 37156428 57 + 88276631 ccacagcctggtgtggagatggTGAcaat-tcagtgcgata--gtgattttgcaggagag i canFam3.chr4 I 24 C 0 s dasNov3.JH562710 227169 55 - 960158 CCAGAGCCGAGAATGGAGATGGTTATAAT-ACAGTGTG--ATTGTGGTTTCATAAAAG-- i dasNov3.JH562710 C 0 C 0 e mm10.chr13 65968285 1992 - 120421639 I e proCoq1.NW_012152163v1 708097 196 - 940639 I a score=1474107.000000 s hg38.chr5_KI270795v1_alt 23574 123 + 131892 caagacagatcccacctctcccttgcctagaacactccattggc-tctcactccaccttcctcagatctgatcttcccaggctg---ctttct---cagcatttaggtcttaatttaga-------------------------agcagtcctct s panTro5.chr5 5272033 123 - 181907262 caagacagatcccacctctcccttgcctagaacactccattggc-tctcactccaccttcctcagatctgatcttcccaggctg---ctttct---cagcatttaggtcttcatttaga-------------------------agcagtcctct i panTro5.chr5 C 0 C 0 s panPan2.chr5 5534503 123 - 183735486 caagacagatcccacctctcccttgcctagaacactccattggc-tctcactccaccttcctcagatctgatcttcccaggctg---ctttct---cagcatttaggtcttcatttaga-------------------------agcagtcctct i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1632225 123 + 3967317 caagacagatcccaccgctcccttgcctagaacactccattggc-tctcactccaccttcctcagatctgatcttcccaggctg---ctttct---cagcatttaggtcttaatttaga-------------------------agcagtcctct i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4484263 123 + 163208435 caagacagatcccacctctcccttgcctagaacactccattggc-tctcgctgcaccttcctcagatctgatcttcccaggctg---ctttct---caacatttaggtcttaatttata-------------------------agcagtcctct i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5716956 148 - 180051392 caaaacagatcccacctctcccttgcctagaacactccattggcttctcaCGgcaccttcctcagatctgatcttcccaggctg---ctttct---cagcatttagatcttaatttagaatgcctctctaagctttcaagt-agagcagtcctct i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5908746 148 - 181584905 caaaacagatcccacctctcccttgcctagaacactccattggcttctcaCGGCACCTTCCTCAGATCTGATCTTCCCAGGCTG---CTTTCT---CAGCATTTAGATCTTAATTTAGAATGCCTCTCTAAGCTTTCAAGT-AGAGCAGTCCTCT i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 937830 148 - 16193990 caaaacagatcccacctctcccttgcctagaacactccattggcttttcaCGgcaccttcctcagatctgatcttcccaggctg---ctttct---caacatttagatcttaatttagaatgcctctctaagctttcaagt-agagcagtcctct i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1754841 148 - 21434487 caagacagatcccacctctcccttgcctagaacactccattggcttctcaCGGCACCTTCCTCAGATCTGATCTTCCCAGGCTG---CTTTCT---CAGCATTTAGATCTTAATTTAGAAGGCCTCTCTAAGCTTTCAGGT-AGAGCAGTCCTCT i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4723680 148 - 82825804 caagacagatcccacctctcccttgcctagaacactccattggcttctcaCGGCACCTTCCTCAGATCTGATCTTCCCAGGCTG---CTTTCT---CAGCATTTAGATCTTAATTTAGAAGGCCTCTCTGAGCTTTCAGGT-AGAGCAGTCCTCT i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 219048 148 + 2521317 caagacagatcccacctctcccttgcctagaacactccattggcttctcaCGGCACCTTCCTCAGATCTGATCTTCCCAGGCTG---CTTTCT---CAGCATTTAGATATTAATTTAGAAGGCCTCTCTAAGCTTTCAGGT-AGAGCAGTCCTCT i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1710117 115 - 2415367 CAAGACAGATCCCGCCTCtcccttgcctagaacactccat---------------------------------ttcccaggctg---ctttct---cagcatttagatcttaatttagaagccctctctaagctttcaggt-agaccagtcctct i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64050951 145 + 204313951 CAAGACAGATCCCACCTCTCCCTTGCCTAGAACACTCCGTTGGCTTCTCGCTGCACCTTCCTCAGATCTAATCT---TAAGCTG---CCTTCT---CAGCA-TTAGGTCTTAATTTAGAAACCCTCTCTAAGCTCTCAGGTTAGAGTGGTCCTCT i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2179991 146 + 10068113 CAAGACAGCTCCCACCTCTCCCTTGCCTAGAACACTTCACTGGCTTCTCGCTGCACCTTCCTCAGATCTAATCT---CAAGCTG---CTTTCT---CAGCATTTAGGTCTTAATTTAGAAACCCTCTCTAAGCCCTCAGGTTAGAGTGGTCCTCT i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 35748 146 - 709587 caagacagatcgcaccgctcccttgcctagaacactccactggcttctcgctgcaccttcctcagaTCTAATCT---CAAGCTG---CTTTCT---CAGCATTTAGGTCTTAATTTAGAAACCCTCTCTAAGCCCTCAGGTGAGAGTGGTCCTTT i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1136703 146 - 2246441 CAAGACAGATCCCACCTCTTCCTTGCCTAGAACACTCCATTGGCTTCTTGCTGCACCTTTCTCAGATCTAATCT---CAAGCTG---CTTTCT---CAGCATTTAGGTCTTAATTTAGAAACCCTCTCTAAGCCCTCAGGTTAGAGTGGTCCTCT i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 708293 140 - 940639 caagtcagatctcatctctcccttgcttagaacacttcattgaccgctcactgcactttcctcagatccgatcttcctaggctg---cattctcagcagcatttaggtcttcatttggtagccctctctt------------ggagtggtcctct i proCoq1.NW_012152163v1 I 196 C 0 s otoGar3.GL873522 1208811 134 + 48283576 CACATATGATCACATCTCTCTCTTGCTTAAAACACTTCCTC-ACTTCTCATTGTACATTCCTCAGATCTGATGTTCCCACGCTG---CACT-----CAGCCTTTAAGTCTTAATTTGGTAGCCCTCTCTT------------TTTCTGGTCCTCT i otoGar3.GL873522 C 0 I 2 s canFam3.chr4 37156485 127 + 88276631 taagtcagatcgtgtctctcccgtgttgaaaatactgcagtggcttcccTTTGAACTTTCC-CAGATCTGTTCTTCCCCCACCACGTCTTTCT---CACCATTCACATCTTAATTCAGAA------------------------GGCACTCCCCT i canFam3.chr4 C 0 I 615 s dasNov3.JH562710 227224 132 - 960158 ------AAATACTGCAGCT--CATGTTTAAAACACTTCTTTGGCTTCCCATTgcattttccccagatttgatctgcccaggctg-gtcctttg---cagcatttcagacttactatggaaggccct-----------atgtttgagagatcttct i dasNov3.JH562710 C 0 C 0 e mm10.chr13 65968285 1992 - 120421639 I a score=906218.000000 s hg38.chr5_KI270795v1_alt 23697 78 + 131892 ctaacctgaatgttaatgtagcctccctttgccccattgctggatctcttcccaccgactttaattttattcagcgtg s panTro5.chr5 5272156 78 - 181907262 ctaacctgaatgttaatggagcctccctttgccccattgctggatctcttcccaccgactttaattttattcagcgtg i panTro5.chr5 C 0 C 0 s panPan2.chr5 5534626 78 - 183735486 ctaacctgaatgttaatggagcctccctttgccccattgctggatctcttcccaccgactttaattttattcagcgtg i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1632348 78 + 3967317 ctaacctgaattttaatgtagcctccctttgccccattgctggatctcttcccaccgactttaattttattcagcgtg i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4484386 78 + 163208435 ctaacctgaattttaatgtagcctccctttgccccattgctggatctcttcccaccgactttaattttattcagcgtg i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5717104 78 - 180051392 ctaacctgaattttaatgtagcctccctttgccccattgctggatctcttgccactgattttaattttattcagcata i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5908894 78 - 181584905 CTAACCTGAATTTTAATGTAGCCTCCCTTTGCCCCATTGCTGGATCTCTTGCCACTGATTTTAATTTTATTCAGCATA i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 937978 78 - 16193990 ctaacctgaattttaatgtagcctccctttgccccattgctggatctcttgccactgattttaattttattcagcata i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1754989 78 - 21434487 CTAACCTGAATTTTAATGTAGCCTCCCTTTGCCCCATTGCTGGATCTCTTGCCACTGATTTTAATTGTATTCAGCGTA i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4723828 78 - 82825804 CTAACCTGAATTTTAATGTAGCCTCCCTTTGCCCCATTGCTGGATCTCTTGCCACTGATTTTAATTTTATTCAGCGTA i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 219196 78 + 2521317 CTAACCTGAATTTTAATGTAGCCTCCCTTTGCCCCATTGCTGGATCTCTTGCCACTGATTTTAATTGTATTCAGCGTA i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1710232 78 - 2415367 ctaacctgaattttaatgtagcctccctttgccccattgctggatctcttcccactgattttaattttattcagcgta i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64051096 72 + 204313951 CTAACCTAAGTTTTAATGTAGCCTCCCTTTGCCCCATTGCTGGATTTCTTCCCAGCTACTT------TATTCAGCGTA i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2180137 72 + 10068113 CTAACCTTAGTTTTAGTGTACCCTCCCTTTGCCCCATTGCTGGATTTCTTCCCACCTACTT------TATTCAGTGTA i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 35894 70 - 709587 CTAACCT--GTTTTAGTGTAGCCTCCCTTTGCCCCATTGCTGGATTTCTTCCCACCTACTT------TATTCAGTGTA i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1136849 72 - 2246441 CTAACCTAAGTTTTAATGTAGCCTCCCTTTGCCCCATTGCTGGATTTCTTCCCATCTACTT------TATTCAGTGTA i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 708433 78 - 940639 ctaacctcaactttaatgtagtctccctttgccccattaccggatctcttctcacgcactttaatttcattcagagta i proCoq1.NW_012152163v1 C 0 I 25 s otoGar3.GL873522 1208947 77 + 48283576 TCAACCT-AAATGTAGCCTAGTCTCTCTGTGCCCCATGACGGGATCTCTTCTCTCTCACTTTAGTTTCATTCAGAGTA i otoGar3.GL873522 I 2 I 3 s dasNov3.JH562710 227356 73 - 960158 ctaacct-----ctaatgtagtctccctttgctgctttgctcactgtcttctcacccagttttattttattcagagta i dasNov3.JH562710 C 0 C 0 e mm10.chr13 65968285 1992 - 120421639 I e canFam3.chr4 37156612 615 + 88276631 I a score=15300.000000 s hg38.chr5_KI270795v1_alt 23775 1 + 131892 c s panTro5.chr5 5272234 1 - 181907262 c i panTro5.chr5 C 0 C 0 s panPan2.chr5 5534704 1 - 183735486 c i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1632426 1 + 3967317 c i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4484464 1 + 163208435 c i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5717182 1 - 180051392 c i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5908972 1 - 181584905 C i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 938056 1 - 16193990 c i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1755067 1 - 21434487 C i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4723906 1 - 82825804 C i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 219274 1 + 2521317 C i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1710310 1 - 2415367 c i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64051168 1 + 204313951 C i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2180209 1 + 10068113 C i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 35964 1 - 709587 C i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1136921 1 - 2246441 C i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1209027 1 + 48283576 C i otoGar3.GL873522 I 3 C 0 s dasNov3.JH562710 227429 1 - 960158 c i dasNov3.JH562710 C 0 C 0 e mm10.chr13 65968285 1992 - 120421639 I e canFam3.chr4 37156612 615 + 88276631 I e proCoq1.NW_012152163v1 708511 25 - 940639 I a score=205064.000000 s hg38.chr5_KI270795v1_alt 23776 19 + 131892 ------ttatcatgggaagctactc s panTro5.chr5 5272235 19 - 181907262 ------ttatcatcggaagctactc i panTro5.chr5 C 0 C 0 s panPan2.chr5 5534705 19 - 183735486 ------ttatcatcagaagctactc i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1632427 19 + 3967317 ------ttatcatcggaagctactc i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4484465 19 + 163208435 ------ttatcatcggaagctactc i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5717183 19 - 180051392 ------ttatcatcggaagctactc i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5908973 19 - 181584905 ------TTATCATCGGAAGCTACTC i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 938057 19 - 16193990 ------ttatcatcggaagctactc i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1755068 19 - 21434487 ------TTATCATCGGAAGCTACTC i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4723907 19 - 82825804 ------TTATCATCGGAAGCTACTC i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 219275 19 + 2521317 ------TTATCATCGGAAGCTACTC i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1710311 19 - 2415367 ------ttgtcatcggaagctactc i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64051169 16 + 204313951 ------TTATT---GGAAGCTACTC i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2180210 16 + 10068113 ------TTGTT---GGAAGCTACTC i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 35965 16 - 709587 ------TTACT---GGAAGCTACTC i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1136922 16 - 2246441 ------TTATT---GAAAGCTACTC i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1209028 19 + 48283576 ------TTATCATTAGAAGCTACTC i otoGar3.GL873522 C 0 I 2 s mm10.chr13 65970277 19 - 120421639 ------TCACCATCTGGAGCTGCTC i mm10.chr13 I 1992 I 2 s dasNov3.JH562710 227430 25 - 960158 ttctttgtagcatcagaagctattt i dasNov3.JH562710 C 0 C 0 e canFam3.chr4 37156612 615 + 88276631 I e proCoq1.NW_012152163v1 708511 25 - 940639 I a score=1374776.000000 s hg38.chr5_KI270795v1_alt 23795 120 + 131892 ctgtttgcttcctttgtggctgtctccccaggtaaactgccag--atgttctagcaattttgcctgacatgttcattgccgtaccccacatctccagcaccgtgcctggtagtactcagcag s panTro5.chr5 5272254 120 - 181907262 ctgtttgcttcctttgtggctgtctccccaggtaaactgccag--atgttctagcaattttgcctgacatgttcattgccgtaccccacatctccagcaccgtgcctggtagtactcagcag i panTro5.chr5 C 0 C 0 s panPan2.chr5 5534724 120 - 183735486 ctgtttgcttcctttgtggctgtctccccaggtaaactgccag--atgttctagcaattttgcctgacatgttcattgccgtaccccacatctccagcaccgtgcctggtagtactcagcag i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1632446 120 + 3967317 ctgtttgcttcctttgtggctgtctccccaggtaaactgccag--atgttctagcaattttgcctgacatgttcattgccgtaccccacatctccagcaccgtgcctggtagtactcagcag i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4484484 120 + 163208435 ctgtttgcttcctttgtggctgtctccccaggtaaactgccaa--atgtcctggcaattttgcctgacatattcattgccgtaccccacatctccagcactgtgcccggtagtactcagcag i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5717202 112 - 180051392 ctgtttgcttcctttgtggccgtctccc--------ctgccaa--atgtgctggcaattttgcctgacatgttcataggggtaccccacatctccagcaccgtgcccagtagtacgcagcag i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5908992 112 - 181584905 CTGTTTGCTTCCTTTGTGGCCGTCTCCC--------CTGCCAA--ATGTgctggcaattttgcctgacatgttcataggcgtaccccacatctccagcaccgtgcccagtagtacgcagcag i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 938076 112 - 16193990 ctgtttgcttcctttgtggccgtctccc--------ctgccaa--atgtgctggcaattttgcctgacatgttcataggcgtaccccacatctccagcaccgtgcccagtagtacgcagcag i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1755087 112 - 21434487 CTGTTTGCTTCCTTTGTGGCCGTCTCCC--------CTGCCAA--ACGTgctggcaattttgcctgacatgttcataggcgtaccccacatctccagcactgtgcccagtagtacgcagcag i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4723926 112 - 82825804 CTGTTTGCTTCCTTTGTGGCCGTCTCTC--------CTGCCAA--ACGTgctggcaattttgcctgacatgttcataggcgtaccccacatctccagcaccgtgcccagtagtactcagcag i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 219294 112 + 2521317 CTGTTTGCTTCCTTTGTGGCCGTCTCCC--------CTGCCAA--ACGTgctggcaattttgcctgacatgttcataggcgtaccccacatctccagcaccgtgcccagtagtacgcagcag i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1710330 112 - 2415367 ctgtttgcttcctttgtggctgtctccc--------ctgccaa--atgtgctggcagttttgcctgacatgttcataggcgtaccccacatctccagcaccgtgcccagtagtactcagcag i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64051185 118 + 204313951 ATGTTTGCTTCCTTTGtggccgtctccccaagtaaactgccaa--gtgtccgggcaattttgcctgacatgtccattgctgtaccccacatctccagcactgt--ccagtagtactcagcag i calJac3.chr2 C 0 I 301 s saiBol1.JH378186 2180226 120 + 10068113 ACGTTTGCTTCCTTTGtggccgtctccccatgtgaactgccaa--atgtcctggcaattttgcctgacatgtccattgctgtaccccacatctccagcactgtgcccagtagtactcagcag i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 35981 113 - 709587 ATGTTTGCTTCCTTTGtggccgtctcccc-------ctgccaa--atgtcctggcaattttgcctgacatgtccattgctgtaccccacatctccagcactgtgcccagtagtactcagcag i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1136938 120 - 2246441 ATGTTTGCTTCCTTTGtggctgtctccccaagtaaattgccaa--gtgtcctggcaattttgcctgacatgtccattgctgtaccccacatctccagcactgtgcccagtagtactcagcag i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 708536 120 - 940639 ttgtttgcttcttttgtaactatcttcccaattaaactgccaa--atgtcctggagaccttgcctgctatgttcattgctaaactctgaatctctaacatggtgctcagtactactaagcag i proCoq1.NW_012152163v1 I 25 C 0 s otoGar3.GL873522 1209049 108 + 48283576 TGGTTTGCTGCTTTTGTAACTCTCTCCCCAATTAAACTGCCAA--ATGTCCTGGAGACCTTGCTTAC-ATGT----------ACTCTGAATCTCTATCATGGT-CTCAGTACGACTAAGCAG i otoGar3.GL873522 I 2 C 0 s mm10.chr13 65970298 116 - 120421639 CTGTTGGCTTGTTTTGTAATTGTTTCTC----TAACATGCCACATATGTGCTGGGGACCTTGTCTGACCCAATCATTGATCTACCTC-CATGTCTATCACAG-GCCCAGTACTACCGGGTAA i mm10.chr13 I 2 C 0 s dasNov3.JH562710 227455 116 - 960158 --ctttgctt-ttttgtgagcttttccccaactaaactgccag---tgtcttggggaccttgactgatatgctcattgctctatccccagtctctagcttgatgctcgataccaccaagcaa i dasNov3.JH562710 C 0 C 0 e canFam3.chr4 37156612 615 + 88276631 I a score=75452.000000 s hg38.chr5_KI270795v1_alt 23915 6 + 131892 gtgttc s panTro5.chr5 5272374 6 - 181907262 gtgttc i panTro5.chr5 C 0 C 0 s panPan2.chr5 5534844 6 - 183735486 gtgttc i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1632566 6 + 3967317 gtgttc i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4484604 6 + 163208435 gtgttc i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5717314 6 - 180051392 gtgttc i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5909104 6 - 181584905 gtgttc i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 938188 6 - 16193990 gtgttc i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1755199 6 - 21434487 gtgttc i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4724038 6 - 82825804 gtgttc i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 219406 6 + 2521317 gtgttc i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1710442 6 - 2415367 gtgttc i colAng1.NW_012115755v1 C 0 C 0 s saiBol1.JH378186 2180346 6 + 10068113 gtgttc i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 36094 6 - 709587 atgttt i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1137058 6 - 2246441 gtgttc i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 708656 6 - 940639 gtattc i proCoq1.NW_012152163v1 C 0 C 0 s otoGar3.GL873522 1209157 6 + 48283576 GTGTTC i otoGar3.GL873522 C 0 C 0 s mm10.chr13 65970414 5 - 120421639 GTGTA- i mm10.chr13 C 0 C 0 s dasNov3.JH562710 227571 6 - 960158 gtgctc i dasNov3.JH562710 C 0 C 0 e calJac3.chr2 64051303 301 + 204313951 I e canFam3.chr4 37156612 615 + 88276631 I a score=98348.000000 s hg38.chr5_KI270795v1_alt 23921 8 + 131892 aataaat-a s panTro5.chr5 5272380 8 - 181907262 aataaat-a i panTro5.chr5 C 0 C 0 s panPan2.chr5 5534850 8 - 183735486 aataaat-a i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1632572 9 + 3967317 aataaataa i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4484610 8 + 163208435 aataaat-a i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5717320 8 - 180051392 aataaat-a i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5909110 8 - 181584905 aataaat-a i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 938194 8 - 16193990 aataaat-a i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1755205 8 - 21434487 aataaat-a i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4724044 8 - 82825804 aataaat-a i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 219412 8 + 2521317 aataaat-a i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1710448 8 - 2415367 aataaat-a i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64051604 5 + 204313951 ---aaag-a i calJac3.chr2 I 301 I 3 s saiBol1.JH378186 2180352 8 + 10068113 gataaat-a i saiBol1.JH378186 C 0 I 630 s cebCap1.NW_016107999v1 36100 8 - 709587 gataaat-a i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1137064 8 - 2246441 aataaat-a i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 708662 8 - 940639 aataaat-g i proCoq1.NW_012152163v1 C 0 C 0 s otoGar3.GL873522 1209163 8 + 48283576 AATAAAC-A i otoGar3.GL873522 C 0 C 0 s dasNov3.JH562710 227577 8 - 960158 aataaat-a i dasNov3.JH562710 C 0 C 0 e mm10.chr13 65970419 0 - 120421639 C e canFam3.chr4 37156612 615 + 88276631 I a score=8727.000000 s hg38.chr5_KI270795v1_alt 23929 2 + 131892 gc- s panTro5.chr5 5272388 2 - 181907262 gc- i panTro5.chr5 C 0 C 0 s panPan2.chr5 5534858 2 - 183735486 gc- i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1632581 2 + 3967317 gc- i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4484618 2 + 163208435 gc- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5717328 2 - 180051392 gc- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5909118 2 - 181584905 gc- i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 938202 2 - 16193990 gc- i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1755213 2 - 21434487 gc- i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4724052 2 - 82825804 gc- i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 219420 2 + 2521317 gc- i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1710456 2 - 2415367 gc- i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64051612 2 + 204313951 gt- i calJac3.chr2 I 3 C 0 s saiBol1.JH378186 2180990 2 + 10068113 GT- i saiBol1.JH378186 I 630 C 0 s cebCap1.NW_016107999v1 36108 2 - 709587 gt- i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1137072 2 - 2246441 gt- i aotNan1.NW_018501968v1 C 0 I 313 s proCoq1.NW_012152163v1 708670 1 - 940639 -t- i proCoq1.NW_012152163v1 C 0 I 1 s otoGar3.GL873522 1209171 1 + 48283576 -T- i otoGar3.GL873522 C 0 I 1 s dasNov3.JH562710 227585 2 - 960158 -tt i dasNov3.JH562710 C 0 C 0 e mm10.chr13 65970419 0 - 120421639 C e canFam3.chr4 37156612 615 + 88276631 I a score=10785.000000 s hg38.chr5_KI270795v1_alt 23931 1 + 131892 c s panTro5.chr5 5272390 1 - 181907262 c i panTro5.chr5 C 0 C 0 s panPan2.chr5 5534860 1 - 183735486 c i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1632583 1 + 3967317 c i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4484620 1 + 163208435 c i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5717330 1 - 180051392 c i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5909120 1 - 181584905 c i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 938204 1 - 16193990 c i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1755215 1 - 21434487 c i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4724054 1 - 82825804 c i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 219422 1 + 2521317 c i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1710458 1 - 2415367 c i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64051614 1 + 204313951 c i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2180992 1 + 10068113 C i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 36110 1 - 709587 c i cebCap1.NW_016107999v1 C 0 I 305 s aotNan1.NW_018501968v1 1137387 1 - 2246441 C i aotNan1.NW_018501968v1 I 313 C 0 s proCoq1.NW_012152163v1 708672 1 - 940639 t i proCoq1.NW_012152163v1 I 1 C 0 s otoGar3.GL873522 1209173 1 + 48283576 T i otoGar3.GL873522 I 1 C 0 s dasNov3.JH562710 227587 1 - 960158 t i dasNov3.JH562710 C 0 C 0 e mm10.chr13 65970419 0 - 120421639 C e canFam3.chr4 37156612 615 + 88276631 I a score=751047.000000 s hg38.chr5_KI270795v1_alt 23932 58 + 131892 attaagtaaacgaatGCACGAGAAAGGAGTTACCAATCTGGGCAGAATGACAAGCAGG s panTro5.chr5 5272391 58 - 181907262 attaagtaaacgaatGCACGAGAAAGGAGTTACCAATCTGGGCAGAATGGCGAGCAGG i panTro5.chr5 C 0 C 0 s panPan2.chr5 5534861 58 - 183735486 attaagtaaacgaatGCACGAGAAAGGAGTTACCAATCTGGGCAGAATGGCAAGCAGG i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1632584 58 + 3967317 attaagtaaacgaatGCACGAGAAAGGAGTTACCAATCTGGGCAGAATGACAAGCAGG i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4484621 58 + 163208435 attaagtaaatgaatGCACGTGAAAGGAGTTACCAATCTGGGCAGAATGACAAGCAGG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5717331 58 - 180051392 attaaataaacgaatGCACAGGAAAGGAGTTACCAATCTGGGCACAATGACAAGCAGG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5909121 58 - 181584905 attaaataaacgaatGCACAGGAAAGGAGTTACCAATCTGGGCACAATGACAAGCAGG i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 938205 58 - 16193990 attaaataaacgaatGCACAGGAAAGGAGTTACCAATCTGGGCACAATGACAAGCAGG i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1755216 58 - 21434487 attaaataaacgaatGCATGGGAAAGGAGTTACCAATCTGGGCACAGTGACAAGCAGG i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4724055 58 - 82825804 tttaaataaacgaatGCACGGGAAAGGAGTTACCAATCTGGGCACAATGACAAGCAGG i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 219423 58 + 2521317 attaaataaacgaatGCATGGGAAAGGAGTTACCAATCTGGGCACAGTGACAAGCAGG i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1710459 58 - 2415367 attaaataaacgaatGCACAAGAAGGGAGTCACCAATCTGGGCACAATGACAAGCAGG i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64051615 58 + 204313951 attaaataaaggaatGAATGAGAAAGAAGTTACCAATTTGGGCAGAATGACAAGCAGG i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2180993 58 + 10068113 ATTAAATAAATGAATGCTTGAGAAAGAAGTTACCAGTTTGGGCAGAATGGCAAGCAGG i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 36416 58 - 709587 ATTAAATAAATGAATGCATGAGAAAGAAGCTACCAATTTGGGCAGAATGACAAGCAGG i cebCap1.NW_016107999v1 I 305 C 0 s aotNan1.NW_018501968v1 1137388 57 - 2246441 ATTAAATAAATGAATGCATGAGAAAGAAGTTACCAATTTGGGCAGAATGACAAGT-GG i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 708673 58 - 940639 attaaagaaacgaatGTATAGGAAAGGAGTTACTAATTTGGGCAGAATGCCAAGCAGG i proCoq1.NW_012152163v1 C 0 C 0 s otoGar3.GL873522 1209174 45 + 48283576 -------------ACGTATAGGAAAGGAGTTACGAGTTTGAGCAGAATGCCAAACAGG i otoGar3.GL873522 C 0 C 0 s mm10.chr13 65970419 55 - 120421639 ---GAGTACAGAAATGTTTGGGAAAGGAGTCGCCATTTTGAGAAGAATGCCAAATAAG i mm10.chr13 C 0 I 438 s dasNov3.JH562710 227588 55 - 960158 gttaaataaatgaatTTATGAGAAAGGAGTT---AATCTGAGCAGAATGTCAACCAAA i dasNov3.JH562710 C 0 C 0 e canFam3.chr4 37156612 615 + 88276631 I a score=71399.000000 s hg38.chr5_KI270795v1_alt 23990 6 + 131892 CGGTTA s panTro5.chr5 5272449 6 - 181907262 CAGTTA i panTro5.chr5 C 0 C 0 s panPan2.chr5 5534919 6 - 183735486 CGGTTA i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1632642 6 + 3967317 CGGTTA i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4484679 6 + 163208435 CTGTTA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5717389 6 - 180051392 CTGTTA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5909179 6 - 181584905 CTGTTA i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 938263 6 - 16193990 CTGTTA i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1755274 6 - 21434487 CTGTTA i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4724113 6 - 82825804 CTGTTA i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 219481 6 + 2521317 CTGTTA i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1710517 6 - 2415367 CTGTTA i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64051673 6 + 204313951 CTGTTA i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2181051 6 + 10068113 CTGCGA i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 36474 6 - 709587 CTGTTA i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1137445 6 - 2246441 CTGTTA i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 708731 6 - 940639 CTGTTA i proCoq1.NW_012152163v1 C 0 I 346 s otoGar3.GL873522 1209219 6 + 48283576 CAGTTT i otoGar3.GL873522 C 0 C 0 s dasNov3.JH562710 227643 6 - 960158 CTGTTA i dasNov3.JH562710 C 0 I 7 e mm10.chr13 65970474 438 - 120421639 I e canFam3.chr4 37156612 615 + 88276631 I a score=2154480.000000 s hg38.chr5_KI270795v1_alt 23996 203 + 131892 GTCCTTGC-TT---GGT------------GG-----------GGAGGA---GGCAAGAAGGTGGG----------------------------------------------------------ATCTCAGCATGGTAGGTGCTGTAATCCCCAGTTCACAGGGTGGGAAGCAGGTTG---TG-------TTTCCTTGCTCCAGTGAC-TCAGCTGTGAGGCAGAGAAGCAGGATCTAT-ACATTTGTGTGCAGCTTCAAAGCCCAGGTCT--TCCAGGAGGTCAA-TTTTCTTGATCCTGGCTATA s panTro5.chr5 5272455 214 - 181907262 GTCCTTGC-TT---GGTGGGGTTGTGGGAGG-----------GGAGGA---GACAAGAAGGTGGG----------------------------------------------------------ATCTCAGCGTG--AGGTGCTGTAATCCCCAGTTCACAGGGTGGGAAGCAGGTTG---TG-------TTTCCTTGCTCCGGTGAC-TCAGCTGTGAGGCAGAGAAGCAGGATCTAT-ACATTTGTGTGCAGCTTCAAAGCCCAGGTCT--TCCAGGAGGTCAATTTTTCTTGATCCTGGCTATA i panTro5.chr5 C 0 C 0 s panPan2.chr5 5534925 214 - 183735486 GTCCTTGC-TT---GGTGGGGATGTGGGAGG-----------GGAGGA---GACAAGAAGGTGGG----------------------------------------------------------ATCTCAGCGTG--AGGTGCTGTAATCCCCGGTTCACAGGGTGGGAAGCAGGTTG---TG-------TTTCCTTGCTCCGGTGAC-TCAGCTGTGAGGCAGAGAAGCAGGATCTAT-ACATTTGTGTGCAGCTTCAAAGCCCAGGTCT--TCCAGGAGGTCAATTTTTCTTGATCCTGGCTATA i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1632648 216 + 3967317 GTCCTTGC-TT---GGTGGGGATGTGGGAGG-----------GGAGGA---GGCAAGAAGGTGGG----------------------------------------------------------ATCTCAGCGTGGTAGGTGCTGTAATCCCCAGTTCACAGGGTGGGAAGCAGGTTG---TG-------TTTCCTTGCTCCAGTGAC-TCAGCTGTGAGGCAGAGAAGCAGGATCTAT-ACATTTGTGTGCAGCTTCAAAGCCCAGGTCT--TCCAGGAGGTCAATTTTTCTTGATCCTGGCTATA i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4484685 216 + 163208435 GTCCTTAC-TT---GGTGGGGATGTGGGAGG-----------GGAGAA---GGCAAGAAGGTGGG----------------------------------------------------------ATCTCAGAGTggtaggtgctgtaatccccagttcacagggtgggaagcaggttg---tg-------tttccttgttccagtgac-tcagctgtgaggcagagaagcaggatttat-acatttgtttgcagcttcaaagcccaggtct--tccAGGAAGTCAGTTTTTCCTGATCCTGGCTATA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5717395 217 - 180051392 GTCCTTGC-TT---GGTGGGGAT-TGGGAGG-----------GGAGGA---GGCAAGAGGGTGGG----------------------------------------------------------ATCCCAGAGTGGTGGGTACTGTAATCCCCAGTTCACAGCGTGGGAAGCAGCTTG---TG-------TTTCTTTGCTCCAGTGAC-ACAGCTGTCAGGCAGAGAAGCAGGATCTGT-ACATTTGTGTGCAGCTTCAAAGCCCAGGTCTTCTCCAGGAAGTCAGTTTTGCTTGATCCTGGCTGTA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5909185 217 - 181584905 GTCCTTGC-TT---GGTGGGGAT-TGGGAGG-----------GGAGGA---GGCAAGAGGGTGGG----------------------------------------------------------ATCCCAGAGTGGTCGGTACTGTAATCCCCAGTTCACAGCGTGGGAAGCAGCTTG---TG-------TTTCCTCGCTCCAGTGAC-ACAGCTGTCAGGCAGAGAAGCAGGATCTGT-ACATTTGTGTGCAGCTTCAAAGCCCAGGTCTTCTCCAGGAAGTCAGTTTTGCTTGATCCTGGCTGTA i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 938269 217 - 16193990 GTCCTTGC-TT---GGTGGGGAT-TCGGAGG-----------GGAGGA---GGCAAGAGGGTGGG----------------------------------------------------------ATcccagagtggtgggtactgtaatccccagttcacagcatgggaagcagcttg---tg-------tttccttgctccagtgac-acagctgtcaggcagagaagcaggatctgt-acatttgtgtgcagcttcaaagcccaggtcttctccaGGAAGTCAGTTTTGCTTGATCCTGGCTGTA i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1755280 217 - 21434487 GTCCTTGC-TT---GGTGGGGAT-TGGGAGG-----------GGAGGA---GGCAAGAGGGTGGG----------------------------------------------------------ATCCCAGAGTGGTGGGTACTGTAATCCCCGGTTCACAGCGTGGGAAGCAGGCTG---TG-------TTTCCTTGCTCCAGTGAC-ACAGCTGTCAGGCAGAGAAGCAGGATCTGT-ACATTTGTGTGCAGCTTCAAAGCCCAGGTCTTCTCCAGGAAGTCAGTTTTGCTTGATCCTGGCTGTA i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4724119 217 - 82825804 GTCCTTGC-TT---GGTGGGGAT-TGGGAGG-----------GGAGGA---GGCAAGAGGGTGGG----------------------------------------------------------ATCCCAGAGTGGTGGGTACTGTAATCTCCAGTTCACAGCGTGGGAAGCAGCTTG---TG-------TTTCCTTGCTCCAGTGAC-ACAGCTGTCAGGCAGAGAAGCAGGATCTGT-ACATTTGTGTGCAGCTTCAAAGCCCAGGTCTTTTCCAGGAAGTcagtttttcttgatcctggctgta i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 219487 217 + 2521317 GTCCTTGC-TT---GGTGGGGAT-TGGGAGG-----------GGAGGA---GGCAAGAGGGTGGG----------------------------------------------------------ATCCCAGAGTGGTGGGTACTGTAATCCCCGGTTCACAGCGTGGGAAGCAGGCTG---TG-------TTTCCTTGCTCCAGTGAC-ACAGCTGTCAGGCAGAGAAGCAGGATCTGT-ACGTTTGTGTGCAGCTTCAAAGCTCAGGTCTTCTCCAGGAAGTCAGTTTTGCTTGATCCTGGCTGTA i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1710523 218 - 2415367 GTCCTTGC-TT---GGTGGGGATGTGGGAGG-----------GGAGGA---GGCAAGAAGGTGGG----------------------------------------------------------ATCCCAGAGTGGTGGGTGCTGTAATCCCCAGTTCACAGGGTGTGAAGCAGGTTG---TG-------TTTCCTTGCTCCAGTGAC-ACAGCTGTCAGGCAGAGAAGCAGGATCTGT-ACATTTGTGTGCAGCTTCAAAGCCTAGGTCTTTTCCAGGAAGTCAGTTTTTCTTGATCCTGGCTGTA i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64051679 218 + 204313951 GTCCTTGC-TT---GGTGGGGATGTGGGAGG-----------GGAGGA---GGCAAAAAGCTGGG----------------------------------------------------------ATCCCAGAGTGGTAGGTGCTATAATCCCCAATTCACAGAGTGGGAAGCAGGTTG---TG-------TTTCCTTGCTCCAGTGAC-ACTGCTTTCAGGCAGAGAAGCAGGATCTAT-ACATTTGTGTGCAGCTTCAAAGCCCAGGTCTTTATCAGGAGGTCCATTTTTCTTGATCCCGGCTATA i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2181057 216 + 10068113 GTCCTTGC-TT---GGTGGGGA-GTGGGAGG-----------GGAGGA---GGCAAAAAGCTGGG----------------------------------------------------------GTCCTAGAGTGGCAGATGCTATCATCCCCAATTCGCAGAGGGGGAAGCAGGC-----TG-------TTTCCTTGCTCCCGCGAC-ACAGCTTTCGGGCAGAGAAGCAGGATCTATCACATTTGTGTGCAGCTTCAAAGCCCAGGTCTTTATCAGGAGGTCCATTTTTCTTGATCCTGACTGTA i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 36480 218 - 709587 GTCCTTGC-TT---GGTGGGGATGTGGGAGG-----------GGAGGA---GGCAAAAAGCTGGG----------------------------------------------------------ATCCCAGACTGGTAGGTGCGATAATCCCCAATTCACAGGGTGGGAAGCAGGCTG---TG-------TTTCCTTGCTCCAGTGAC-ACAGCTTTCGGGCAGAGAAGCAGGATCTAC-ACATTTGTGTGCAGCTTCAAAGCCCAGGTCTTTATCAGGAGGTCCATTTTTCTTGATCCCGGCTATA i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1137451 210 - 2246441 GTCCTTGC-TT---GGTGAGGATGTGCGAGG-----------GGAGAA---GGCAAAAAGCTGGG----------------------------------------------------------ATCCCAGAGTGGTAGGCA--------CCCAGTTCACACGGTGGGAAGCAGGTTG---TG-------TTTCCTTGCTCCAGTGAC-ACAGCTTTCAGGCAGAGAAGCAGGATCTAT-ACATTTGTGTGCAGCTTCAAAGCCCAGGTCTTTATCAGGAGGTCCATTTTTCTTGATCCTGGCTATA i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1209225 269 + 48283576 ACATTTGC-TTTGGTGTGGGAGTGTGGGGGGTTGTAGAAAAAGAAGGA---GGGAAGGGAACAGG-GGAAGGGCA-----------CCTGAGAA-AGTAAAGCtctcacttaactcttacagagtcctggagaggtagatgctgtaat-cccagatcacagtatggggagtaggctg---agaggtgcattaccttgccccagtgat-gcagctgtcaggcacagaaacaggatctaa-ac--ctgtgtgcaactccaaagcctgggtcttttccagtaggtcagttgctcttG------------ i otoGar3.GL873522 C 0 C 0 s dasNov3.JH562710 227656 274 - 960158 GCCCTGGCAGT---GAATAGAATGGAGGAGA-----------GAAAGAAGCGGCAGGAGAGAGGTAAGAAAAGTAATTCATTAAATCCAGGGAATAAACAAGCtctcattaagacctcacaatgacccagagcggtaggtggtatagactc-----cacagaacaggagacagttgggttca-------tttccttgctcaaatcataacagctgttaggtgtaggagcaggatccaa-acctc---gtgtggcctcaaagcccaggtcctttccCATAGATCAGTGTCTCT--ACCCTGTCTGTA i dasNov3.JH562710 I 7 C 0 e mm10.chr13 65970474 438 - 120421639 I e canFam3.chr4 37156612 615 + 88276631 I e proCoq1.NW_012152163v1 708737 346 - 940639 I a score=699373.000000 s hg38.chr5_KI270795v1_alt 24199 56 + 131892 TACTGGAACCACCTGATGTTCATTCTCCA-----TGCCA------AGCAAGCTCCCCAGGGGATTCT s panTro5.chr5 5272669 56 - 181907262 TACTGGAACCACCTGATGTTCAGTCTCCA-----TGCCA------AGCAAGCTCCCCGGGGGATTCT i panTro5.chr5 C 0 C 0 s panPan2.chr5 5535139 56 - 183735486 TACTGGAACCACCTGATGTTCAGTCTCCA-----TGCCA------AGCAAGCTCCCCGGGGGATTCT i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1632864 56 + 3967317 TACTGGAACCACCTGATGTTCAGTCTCCA-----TGCCA------AGCAAGCTCCCCAGGGGATTCT i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4484901 56 + 163208435 TACTGGAACCACCTGATGTTCAGTCTCCA-----TGCCA------AGCaagctccccaggggattct i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5717612 56 - 180051392 TACTGGAACCACCTGATGTTCAGTCTCTA-----TGCCA------AGCAAGCTCCCCAGGGGATTCT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5909402 56 - 181584905 TACTGGAACCACCTGATGTTCAGTCTCTA-----TGCCA------AGCAAGCTCCCCAGGGGATTCT i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 938486 56 - 16193990 TACTGGAACCACCTGATGTTCAGTCTCTA-----TGCCA------AGCaagctccccaggggattct i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1755497 56 - 21434487 TACTGGAACCACCTGATGTTCAGTCTCTA-----TGCCA------AGCAAGCTCCCCAGGGGATTCT i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4724336 56 - 82825804 cactggaaccacctgATGTTCAGTCTCTA-----TGCCA------AGCAAGCTCCCCAGGGGATTCT i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 219704 56 + 2521317 TACTAGAACCACCTGATGTTCAGTCTCTA-----TGCCA------AGCAAGCTCCCCAGGGGATTCT i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1710741 56 - 2415367 TACTGGAAGCACCTGATGTTCAGTCTCTA-----TGCCA------AGAGAGCTCCTCAGGGGATTCT i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64051897 56 + 204313951 TACTGGAACCACCTGATGTTCAGTCTCCA-----CACCA------AGCAAGCTTCCCAGGGGAttct i calJac3.chr2 C 0 I 313 s saiBol1.JH378186 2181273 56 + 10068113 TACTGGAACCACCTGATGTTCAGTCTCCA-----CGCCA------AGCAAGCTTCCCAGGGGATTCT i saiBol1.JH378186 C 0 I 7 s cebCap1.NW_016107999v1 36698 56 - 709587 TACTGGAACCACCTGATGTTCAGTCTCCA-----CGCCA------AGCaagcttcccaggggattct i cebCap1.NW_016107999v1 C 0 I 7 s aotNan1.NW_018501968v1 1137661 56 - 2246441 TGCTGGAACCACCTGATGTTCAATCTCCA-----CACCA------AGCaagcttcccaggggattct i aotNan1.NW_018501968v1 C 0 I 7 s otoGar3.GL873522 1209494 56 + 48283576 CACTTGAACCATCTGATGTTTAGGCCACA-----TCCCA------GCCAAACTCCCCAGGCGGTTGT i otoGar3.GL873522 C 0 C 0 s mm10.chr13 65970912 62 - 120421639 tacaAGAACTGTCTGGTGTTCAGACCCCG-----CCTCAGATCTTACCAAGCTCTCCAGGGAGTTCT i mm10.chr13 I 438 C 0 s dasNov3.JH562710 227930 59 - 960158 CCCTAGAATCA-CTGACGTTCATGCCCCGACCCCCTCCA------ACCAAATACCCCAGG-GATTCT i dasNov3.JH562710 C 0 C 0 e canFam3.chr4 37156612 615 + 88276631 I e proCoq1.NW_012152163v1 708737 346 - 940639 I a score=440513.000000 s hg38.chr5_KI270795v1_alt 24255 44 + 131892 --------AACAGGA-------TGGAGAACCACCATCCTAGGCCCTGGTGCTTCTCTGA s panTro5.chr5 5272725 44 - 181907262 --------AACAGGA-------TGGAGAACCACCATCCTAGGCCCTGGTGCTTCTCTGA i panTro5.chr5 C 0 C 0 s panPan2.chr5 5535195 44 - 183735486 --------AACAGGA-------TGGAGAACCACCATCCTAGGCCCTGGTGCTTCTCTGA i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1632920 44 + 3967317 --------AACAGGA-------TGGAGAACCGCCATCCTAGGCCCTGGTGCTTCTCTGA i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4484957 44 + 163208435 --------aacagga-------tggagaaccacCACCCTAGGCCCTGGTGCTTCTCTGG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5717668 44 - 180051392 --------AACAGGA-------TGGAGAACCACCACCCTAGGCCCTGGTGCTTCTCTGG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5909458 44 - 181584905 --------AACAGGA-------TGGAGAACCACCACCCTACGCCCTGGTGCTTCTCTGG i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 938542 44 - 16193990 --------aacagga-------tggagaaccacCACCCTAGGCCCTGGTGCTTCTCTGG i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1755553 44 - 21434487 --------AACAGGA-------TGGAGAACTACCACCCTAGGACCCGGTGCTTCTCTGG i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4724392 44 - 82825804 --------AACAGGA-------TGGAGAACCACCACCCTAGGCCCTGGTGCTTCTCTGG i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 219760 44 + 2521317 --------AACAGGA-------TGGAGAACTACCACCCTAGGACCTGGTGCTTCTCTGG i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1710797 44 - 2415367 --------AACAGGA-------TGGAGAACCACCGCCCTAGGCCCTGGTGCTTCTCTGG i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64052266 44 + 204313951 --------AACTGGG-------TGGAGAACCACCACCCTATGCCCTGCTGCTTCTCTGG i calJac3.chr2 I 313 C 0 s saiBol1.JH378186 2181336 44 + 10068113 --------AACTGGG-------GGGAGAACCGCCACCCTAGGCCCTGCTGCTTCTCGGG i saiBol1.JH378186 I 7 C 0 s cebCap1.NW_016107999v1 36761 44 - 709587 --------aactggg-------tggagaaccacCACGCTAGGCCCCGCTGCTTCTCTGG i cebCap1.NW_016107999v1 I 7 C 0 s aotNan1.NW_018501968v1 1137724 44 - 2246441 --------aactggg-------tggagaaccacCATCCTAGGCCCTGCTGCTTCTCTGG i aotNan1.NW_018501968v1 I 7 C 0 s otoGar3.GL873522 1209550 36 + 48283576 -----------------------AATCCACCACTGCTGCAGGCCCTGCTGTTTCTTTAG i otoGar3.GL873522 C 0 C 0 s mm10.chr13 65970974 48 - 120421639 --------AATGGTAACTCCATTGGTGAACCTCCTTCCAA---CCAGTTTGTTTTCTCa i mm10.chr13 C 0 C 0 s dasNov3.JH562710 227989 51 - 960158 AACATCCCATCTCAG-------TTGA-AACCGCAGCCCTCAGCCCTGTGGTTTCCATGG i dasNov3.JH562710 C 0 C 0 e canFam3.chr4 37156612 615 + 88276631 I e proCoq1.NW_012152163v1 708737 346 - 940639 I a score=2430722.000000 s hg38.chr5_KI270795v1_alt 24299 200 + 131892 TCTGTGGAAAGGTGAGTGTTGTCACAGAAATGGCACAACAGTGCCTGGGAGTG-GAGGgagaaggcttcctgaagaaggcactggggtttgtcttagaagggtgggtaggaatctgctgggcagctcttggagaagg--tttgaggcagagg---ggctggtgtctgcaaagg----cgtggagacaTGCACCATCCTGGTCTGGTGTGG s panTro5.chr5 5272769 200 - 181907262 TCTGTGGAAAGGTGAGTGTTGTCACAGAAATGGCACAACAGTGCCTGGGAGTG-GAGGgagaaggcttcctgaagaaggcactggggtttgtcttagaagggtgggtaggaatctgctgggcagctcttggagaagg--tttgaggcagagg---ggctggtgtctgcaaagg----cgtggagacaTGCACCATCCTGGTCTGGTGTGG i panTro5.chr5 C 0 C 0 s panPan2.chr5 5535239 200 - 183735486 TCTGTGGAAAGGTGAGTGTTGTCACAGAAATGGCACAACAGTGCCTGGGAGTG-GAGGgagaaggcttcctgaagaaggcactggggtttgtcttagaagggtgggtaggaatctgctgggcagctcttggagaagg--tttgaggcagagg---ggctggtgtctgcaaagg----cgtggagacaTGCACCATCCTGGTCTGGTGTGG i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1632964 200 + 3967317 TCTGTGGAAAGGTGAGTGTTGTCACAGAAATGGCACAACAGTGCCTGGGAGTG-GAGGgagaaggcttcctgaagaaggcactggggtttgtcttagaagggtgggtagaaatctgctgggcagctcttggagaagg--tttgaggcagagg---ggctggtgtctgcaaaga----catggagacaTGCACCATCCTGGTCTGGTGTGG i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4485001 200 + 163208435 TCTGTGGAAAGGTGAGTGTTGTCACAGAAATGGTACAACAGTgcctgggagtg-gagggagaaggcttcctgaagaaggcactggggtttgtcttagaagggtgggtaggaatctgcggggcagctcttggagaagg--tttgaggcagagg---ggctagtgtctgcaaagg----cgtggagatgtgaaccatcctggtctggtgtgg i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5717712 200 - 180051392 TCTGTGGAAGGGTGAGTGTTGTcacagaaatggcacaacagtgcctgggagcg-gaggaagaaggcttcctgaagaaggcactggggtttgtcttagaagggtgggtaggaacctgccgggcagctgttggagaagg--tttgaggctgagg---ggctggtctctgcaaagt----cttggagacatgaaCCATCCTGGTCTGGTGTGG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5909502 200 - 181584905 TCTGTGGAAGGGTGAGTGTTGTCACAGAAATGGCACAACAGTGCCTGGGAGCG-GAGGAAGAAGGCTTCCTGAAGAAGGCACTGGGGTTTGTCTTAGAAGGGCGGGTAGGAACCTGCCGGGCAGCTGTTGGAGAAGG--TTTGAGGCCGAGG---GGCTGGTCTCTGCAAAGG----CGTGGAGACATGAACCATCCTGGTCTGGTGTGG i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 938586 200 - 16193990 TCTGTGGAAGGGTGAGTGTTGTCACAGAAATGGCACAACAGTgcctgggagcg-gaggaagaaggcttcctgaagaaggcactggggtttgtcttagaagggcgggtaggaacctgccgggcagctgttggagaagg--tttgaggccgagg---ggctggtctctgcaaagg----cgtggagacatgaaccatcctggtctggtgtgg i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1755597 186 - 21434487 TCTGTGGAAAGGTGAATGTTGTCACAGAAATGGCACAACAGTGCCTGGGAACG-GAG--------------GAAGAAGGCACTGGGGTTTGTCTTAGAAGGGCGGGTAGGAATCTGCCCGGCAGCTGTTGGAGAAGG--TCTGAGGCAGAGG---GACTGGTCTCTGCAAAGG----CGTGGAGACATGAACCGTCCTGGTCTGGTGTGG i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4724436 200 - 82825804 TCTGTGGAAAGGTGAGCGTTGTCACAGAAATGGCACAACAGTGCCTGGGAGCG-GAGGAAGAAGGCTTCCTGAAGAAGGCACAGGGGTTTGTCTTAGAAGGGCGGGTAGGAATCTGCCGGGCAGCTGTTGGAGAAGG--TTTGAGGCAGAGG---GGCTGGTCTCTGCAAAGG----TGTGGAGACATGAACCATCCTGGTCTGGTGTGG i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 219804 186 + 2521317 TTTGTGGAAAGGTGAATGTTGTCACAGAAATGGCACAACAGTGCCTGGGAGCG-GAG--------------GAAGAAGGCACTGGGGTTTGTCTTAGAAGGGCGGGTAGGAATCTGCCGGGCAGCTGTTGGAGAAGG--TCTGAGGCAGAGG---GGCTGGTCTCTGCAAAGG----CGTGGAGACATGAACCGTCCTGGTCTGGTGTGG i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1710841 200 - 2415367 TCTGTGGAAAGGTGAGTGTTGTCACAGAAATGGCACAACAGTGCCTGGGAGCG-GAGGAAGAAGGCTTCCTGAAGAAGGCGCTGGGGTTTGTCTTAGAAGGGTGGGTAGGAATATGCTGGGCAGCTCTTGGAGAAGG--TTTGAGGCAGAGG---GGCTGGTCTCTGCAAAGG----CGTGGAGACATGAACCATCCTGGTCTGGTGCAG i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64052310 200 + 204313951 TCTGTAGAAAGGTGAGTGTTGTCACAGAAATGGCACAGCAGTGCCTGGGAGTA-GAGGAAgaaggctttctgaagaaggcactggggtttgttctagaagggtgggtaggaatctgccgggcagctcttggagaagg--tttgaggcagagg---ggctggtctctgcaaagg----catggagacatgaaCTGTCCTGGTCTGGCATGG i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2181380 200 + 10068113 TCTGTAGAAAGGTGAGTGTTGTCACAGCAATGGCACAGCAGTgcctgggagta-gaggaagaaggctttctgaagaaggcactggggtttgttctagaagggtgggtaggaatctgccaggcagctcttggagaagg--tttgaagcagagg---ggctggtctctgcaaagg----catggagacatgaaccgtcctggtgtggcatag i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 36805 200 - 709587 TCtgtagaaaggtgagtgttatcacagaaatggcacagcagtgcctgggagta-gaggaagaaggctttctgaagaaggcactgcggtttgttctagaagggtgggtaggaatctgccgggcagctcttggagaagg--tttgaggcagagg---ggctggtctctgcaaagg----catggagacatgaaCCGTCCTGGTGTGGTATGG i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1137768 200 - 2246441 TCTGTAGAAAGGTGAGTGTTGTCACAGAAATGGCACAGCAGTGCCCGGAAGTA-GAGGAAgaaggctttctgaagaaggtactggggtttgttctagaatggtgggtaggaatctgccgggcagctcttggagaagg--tttgaggcagagg---ggctggtctctgcaaagg----catggagacacgaaccatcctggtctggcatgg i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 709083 194 - 940639 TCTGTAGAAAGGTGAGTGTTGTCACAGAAATAGCACAGGAGTGCCTGGGAGCG-GAGGAAGAAGGCTTCCTGAA---------GGGGTTTGTCCTGGAAGTGGGGGT-GAAATCTGCCAGGCAGCCCTTTGAGGAGG--TTTGAGGCAGAGG---GGCTGGTCTCTGCAAGGAAAGGCATGGACACATGAGCCATCCTGGTCCAGTGTGG i proCoq1.NW_012152163v1 I 346 I 41 s otoGar3.GL873522 1209586 147 + 48283576 TCTGCAGAAGGGTGACCCTTGTCACAGAAATGGCACAGGAGTGCCTGGGAGTG-GAGGAAG-GTGCTTCCTGAA---------GGGGTTTGTCCAAGAAG-----------------------------------AG--TTTGAGGCAGAGG---GGCTAGTCTCGGCAAAGGTGACCA------------ACATCCTGGTCTGGTGTAG i otoGar3.GL873522 C 0 I 3 s mm10.chr13 65971022 135 - 120421639 ---------------------gcacagacaagg---aggcaagcctgtacttg-gagaaaga---cttcctggaggaggcatctcagtgtgcgcttggtg-----atagacgctaacctggcca-----ggagcagg-------ggcaaagGCTCAGCTAGT------GGAGG----CAGGCAGCTGTGA-------------------- i mm10.chr13 C 0 C 0 s dasNov3.JH562710 228040 199 - 960158 TCTGTGGAAAGCTGGatgatggcacagaggtggcacag-ggtgcctaggggtatggggaaggaggctt-ctcaaggaggcatttgagttggtccttgaagggtaggtagaaaagtgccaggcagcgcttggagagggcatgtgaggcagagg---gcctgctctaggcaaagg----cac--agattcgaggcatccgcacctggtgcgg i dasNov3.JH562710 C 0 I 3 e canFam3.chr4 37156612 615 + 88276631 I a score=407783.000000 s hg38.chr5_KI270795v1_alt 24499 40 + 131892 ACAAGGAG-CAGGGCAGCGGGGCAGGCAGGGTGAGGATGGA s panTro5.chr5 5272969 40 - 181907262 ACAAGGAG-CAGGGCAGCGGGGCAGGCAGGGTGAGGATGGA i panTro5.chr5 C 0 C 0 s panPan2.chr5 5535439 40 - 183735486 ACAAGGAG-CAGGGCAGCGGGGCAGGCAGGGTGAGGATGGA i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1633164 40 + 3967317 ACAAGGAG-CAGGGCAGCGGGGCAGGCAGGGTGAGGATGGA i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4485201 40 + 163208435 acaaggag-cagggcagcgggggaggcagagtgagGATGGA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5717912 39 - 180051392 ACAAGGAG-CAGGGCAGC-GGGCAGGCACGGTGAGGATGGA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5909702 39 - 181584905 ACAAGGAG-CAGGGCAGC-GGGCAGGCAGGGTGAGGATGGA i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 938786 39 - 16193990 acaaggag-cagggcagc-gggcaggcagggtgagGATGGA i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1755783 40 - 21434487 ACAAGGAG-CAGGGCAGCGGGGCAGGCAGGGTGAGGATGGA i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4724636 40 - 82825804 ACAAGGAG-CAGGGCAGCGGGGCAGGCAGGGTGAGGATGGA i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 219990 40 + 2521317 ACAAGGAG-CAGGGCAGCGGGGCAGGCAGGGTAAGGATGGA i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1711041 40 - 2415367 ACAAGGAG-CAGGGCAGCGGAGCAGGCAGGGTGAGGATGGA i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64052510 40 + 204313951 ACAAGGAG-CAGGGCAGAGGGGCAGCCAGGGTGAGGATGGA i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2181580 40 + 10068113 acaaggag-cagggcagaggggcagccagggtgagGATGGA i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 37005 40 - 709587 ACAAGGAG-CAGGGCAGAGGGGCAGCCAGGGTGAGGATGGA i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1137968 40 - 2246441 acaaggag-cagggcagaggggcagccagggtgAGGATGGA i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1209736 37 + 48283576 ACACACAG-CAGGGCAGC--AGCAGGCA-GGCAGTGATGGG i otoGar3.GL873522 I 3 C 0 s mm10.chr13 65971157 38 - 120421639 --GATGGG-CGTTCCCTTACAGCACCGAGGACTGTGTTCGC i mm10.chr13 C 0 I 3 s dasNov3.JH562710 228242 32 - 960158 atggggagccagggccgt------ggccggGTCATGGG--- i dasNov3.JH562710 I 3 C 0 e canFam3.chr4 37156612 615 + 88276631 I e proCoq1.NW_012152163v1 709277 41 - 940639 I a score=433978.000000 s hg38.chr5_KI270795v1_alt 24539 36 + 131892 --CTCCTTGAACAG-TCTTGCACTGAGGAGAGTGTTGAC s panTro5.chr5 5273009 36 - 181907262 --CTCCTTGAACAG-TCTTGCACTGAGGAGAGTGTTGAC i panTro5.chr5 C 0 C 0 s panPan2.chr5 5535479 36 - 183735486 --CTCCTTGAACAG-TCTTGCACTGAGGAGAGTGTTGAC i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1633204 36 + 3967317 --CTCCTTGAACAG-TCTTGCACTGAGGAGAGTGTTGAT i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4485241 36 + 163208435 --CTCCTTGAACAG-TCTTGCACTGAGGAGAGTGTTGAC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5717951 36 - 180051392 --CTCCTTGAATAG-TGTTGCATTGAGGAGAGTGTTGAC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5909741 36 - 181584905 --CTCCTTGAATAG-TGTTGCATTGAGGAGAGTGTTGAC i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 938825 36 - 16193990 --CTCCTTGAATAG-TGTTGCATTGAGGAGAGTGTTGAC i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1755823 36 - 21434487 --TTCCTTGAATAG-TGTTGCATTGAGGAGAGTGTTGAC i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4724676 36 - 82825804 --TTCCTTGAATAG-TGTTGCATTGAGGAGAGTGTTGAC i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 220030 36 + 2521317 --TTCCTTGAATAG-TGTTGCATTGAGGAGAGTGTTGAC i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1711081 35 - 2415367 --TTCCTTGAATAG-TCTTGC-TTGAGGAGAGTGTTGAC i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64052550 36 + 204313951 --TTCCTCGAACAG-TCTTGCATTGAGGAGAGTGTTAAC i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2181620 36 + 10068113 --TTCCTTGAACAG-TCTTGCATCGAGGAGAGTGTTGAC i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 37045 36 - 709587 --TTCCTTGAACAG-TCTTGCGTCGAGGAGATTGTTGAC i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1138008 36 - 2246441 --TTCCTTGAACAG-TCTTGGATTGAGGAGAGTGTTGAC i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 709318 36 - 940639 --CTCCTTCAACGG-TCTTGCATTGAGGAGGGTGTTGAC i proCoq1.NW_012152163v1 I 41 I 7401 s otoGar3.GL873522 1209773 35 + 48283576 ---CTCCTCACCGG-CCTTGCATCAAGAAGGGCGTTGAC i otoGar3.GL873522 C 0 C 0 s mm10.chr13 65971198 36 - 120421639 --TTCCCTTACAGC-TCCTGCATTGGAGACTGTGCTCAC i mm10.chr13 I 3 C 0 s dasNov3.JH562710 228274 36 - 960158 CTTTCCTTTAACGGCCCCTGCATCCAA---AGTGGTGAC i dasNov3.JH562710 C 0 C 0 e canFam3.chr4 37156612 615 + 88276631 I a score=32722.000000 s hg38.chr5_KI270795v1_alt 24575 5 + 131892 TGACA s panTro5.chr5 5273045 5 - 181907262 TGACA i panTro5.chr5 C 0 C 0 s panPan2.chr5 5535515 5 - 183735486 TGACA i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1633240 5 + 3967317 TGACA i gorGor5.CYUI01015413v1 C 0 I 34104 s nomLeu3.chr2 4485277 5 + 163208435 TGACG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5717987 5 - 180051392 CAACG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5909777 5 - 181584905 CAACG i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 938861 5 - 16193990 CAACG i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1755859 5 - 21434487 CAACG i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4724712 5 - 82825804 CAACG i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 220066 5 + 2521317 CAACG i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1711116 5 - 2415367 CAACG i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64052586 5 + 204313951 TGACG i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2181656 5 + 10068113 TGACG i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 37081 5 - 709587 TGACG i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1138044 5 - 2246441 TGATG i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1209808 5 + 48283576 TCAAG i otoGar3.GL873522 C 0 C 0 s mm10.chr13 65971234 5 - 120421639 TCAAG i mm10.chr13 C 0 C 0 s dasNov3.JH562710 228310 5 - 960158 CCAAG i dasNov3.JH562710 C 0 C 0 e canFam3.chr4 37156612 615 + 88276631 I e proCoq1.NW_012152163v1 709354 7401 - 940639 I a score=90020.000000 s hg38.chr5_KI270795v1_alt 24580 10 + 131892 TATTTGGACT s panTro5.chr5 5273050 10 - 181907262 TATTTGGACT i panTro5.chr5 C 0 C 0 s panPan2.chr5 5535520 10 - 183735486 TATTTGGACT i panPan2.chr5 C 0 C 0 s nomLeu3.chr2 4485282 10 + 163208435 CATTTGGACT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5717992 10 - 180051392 CATTTGGACT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5909782 10 - 181584905 CATTTGGACT i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 938866 10 - 16193990 CATTTGGACT i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1755864 10 - 21434487 CATTTGGACT i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4724717 10 - 82825804 CATTTGGACT i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 220071 10 + 2521317 CATTTGGACG i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1711121 10 - 2415367 CATTTGGACT i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64052591 10 + 204313951 CATTTGATCT i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2181661 10 + 10068113 CATTTGATCT i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 37086 10 - 709587 CATTTGATTT i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1138049 10 - 2246441 CTTTTGATCT i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1209813 10 + 48283576 TGTTTGGACT i otoGar3.GL873522 C 0 C 0 s mm10.chr13 65971239 10 - 120421639 TTCCTGGACA i mm10.chr13 C 0 C 0 s dasNov3.JH562710 228315 10 - 960158 CTTTTAGACT i dasNov3.JH562710 C 0 C 0 e canFam3.chr4 37156612 615 + 88276631 I e proCoq1.NW_012152163v1 709354 7401 - 940639 I e gorGor5.CYUI01015413v1 1633245 34104 + 3967317 I a score=301776.000000 s hg38.chr5_KI270795v1_alt 24590 26 + 131892 CTTCTACCTTGTCTGTCATGGTCTAA s panTro5.chr5 5273060 26 - 181907262 CTTCTACCTTGTCTGTCATGGTCTAA i panTro5.chr5 C 0 C 0 s panPan2.chr5 5535530 26 - 183735486 CTTCTACCTTGTCTGTCATGGTCTAA i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1667349 26 + 3967317 CTTCTACCTTGTCTGTCATGGTCTAA i gorGor5.CYUI01015413v1 I 34104 C 0 s nomLeu3.chr2 4485292 26 + 163208435 CTTCTACCTTGTCTGTCATGGTTTAA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5718002 26 - 180051392 TCTCTGCCTTGTCTGTCATGGTCTAA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5909792 26 - 181584905 TCTCTGCCTTGTCTGTCATGGTCTAA i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 938876 26 - 16193990 TCTCTGCCTTGTCTGTCATGGTCTAA i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1755874 26 - 21434487 CCTCTGCCTTGTCTGTCATGGTCTAA i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4724727 26 - 82825804 CCTCTGCCTTGTCTGTCATGGTCTAA i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 220081 26 + 2521317 ACTCTGCCTTGTCTGTCATGGTCTAA i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1711131 26 - 2415367 CCTCTGCCTTGTCTGTCATGGTCTAA i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64052601 26 + 204313951 CTTCCACCTTGTCTGTCATGGTCTAA i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2181671 26 + 10068113 CTTCCACCTTGTCTGTCATGGTCTAG i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 37096 26 - 709587 CTTCTACCTTGTCTGTCATGGTCTAA i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1138059 26 - 2246441 CTTCCACTTTGTCTGTCATGGTCTAA i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1209823 26 + 48283576 CTGATGCTTTGTCTGCCATTGTCTAA i otoGar3.GL873522 C 0 C 0 s mm10.chr13 65971249 26 - 120421639 TTTCTACTTTGCCTGCCGTGGTCTAA i mm10.chr13 C 0 I 1869 s dasNov3.JH562710 228325 6 - 960158 CCTCTA-------------------- i dasNov3.JH562710 C 0 C 0 e canFam3.chr4 37156612 615 + 88276631 I e proCoq1.NW_012152163v1 709354 7401 - 940639 I a score=206191.000000 s hg38.chr5_KI270795v1_alt 24616 20 + 131892 TGCATGTCTTTTCTGGGTGT s panTro5.chr5 5273086 20 - 181907262 CGCATGTCTTTTCTGGATGT i panTro5.chr5 C 0 C 0 s panPan2.chr5 5535556 20 - 183735486 CGCATGTCTTTTCTGGATGT i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1667375 20 + 3967317 CGCATGTCTTTTCTGGATGT i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4485318 20 + 163208435 CGCATGTCTTTTCTGGATGT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5718028 20 - 180051392 CCCATCTCTTTTCTGGATGT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5909818 20 - 181584905 CCCATCTCTTTTCTGGATGt i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 938902 20 - 16193990 CCCATCTCTTTTCTGGATGT i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1755900 20 - 21434487 CCCATGTCTTTTCTGGATGT i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4724753 20 - 82825804 CCCATCTCTTTTCTGGATGT i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 220107 20 + 2521317 CCCATGTCTTTTCTGGATGT i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1711157 20 - 2415367 CCCATCTCTTTTCTGGATGT i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64052627 20 + 204313951 TCTATCTCTTTTCTGGATGT i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2181697 20 + 10068113 CCTATCTCTTTTCTGGATGC i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 37122 20 - 709587 CCTATCTCTTTTCTGGATGT i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1138085 20 - 2246441 CCTGTCTCTTTTCTGGATGT i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1209849 20 + 48283576 CCTGCCTCTTTTCTGGGTGT i otoGar3.GL873522 C 0 I 201 e mm10.chr13 65971275 1869 - 120421639 I e canFam3.chr4 37156612 615 + 88276631 I e proCoq1.NW_012152163v1 709354 7401 - 940639 I e dasNov3.JH562710 228331 0 - 960158 C a score=1469382.000000 s hg38.chr5_KI270795v1_alt 24636 190 + 131892 GGTTTC---ttt--------------tctttttt-tt----------ttttttttcttttttcgagactgagtc---------tcacccaggctggagtgcagtggcgtgatcttggctcactgcaacctccacctcccgggttcaagcgattctcctgcctcagcctcccgagtagctgggaccacaggtgtgtgccaatacacccagctaatttgtgtatttttt s panTro5.chr5 5273106 191 - 181907262 GGTTTC--tttt--------------tttttttt-tt----------ttttttttcttttttcaagactgagtc---------tcacccaggctggagtgcagtggcgtgatcttggctcactgcaacctccacctcccgggttcaagcgattctcctgcctcagcctcccgagtagctgggaccacaggtttgtgccaatacacccggctaatttgtgtatttttt i panTro5.chr5 C 0 C 0 s panPan2.chr5 5535576 183 - 183735486 GGtttc------------------------tttt-tt----------ttttttttcttttttcaagactgagtc---------tcacccaggctggagtgcagtggcgtgatcttggctcactgcaacctccacctcccgggttcaagcgattctcctgcctcagcctcccgagtagctgggaccacaggtttgtgccaatacacccagctaatttgtgtatttttt i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1667395 188 + 3967317 GAtttc---------------------------t-tt----------ttttttttcttttttcgagactgagtctcac-cctgtcacccaggctggagtgcagtggcgcgatcttggctcactgcaacctccacctccaaggttcaagcgattctcctgcctcagcctcccgagtagctgggaccacaggtgtgtgccaatacacccggctaatttgtgtatttttt i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4485338 199 + 163208435 GGTTTC--tttt--------------ttttgttg-tt----------gttgttttgtttttttgagactgagtcttgc-cctgtcacccaggctggagtgcagtggcgcgatcttgactcactgcaccctccacctcctgggttcaagcgattctcctgcctcagccccccgagtagctgggaccacaggtgtgtgccactacacccggctaatttgtgtatttttt i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5718048 207 - 180051392 GGTTTC--TTTT--------------TTTTtttt-ttccttttctg--tttttttttttttttgagactgagtctcgc-cctgtcacccaggctggagtgcagtggcgcaatcttggctcactgcaacctccacctcctgggttcaagtgattctcctgcctcagcctcccgagtagctggaaccacaggtgcaccccaccactcccagctgatttgtgtatttttt i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5909838 207 - 181584905 ggtttc--tttt--------------tttttttt-ttccttttctg--tttttttttttttttgagactgagtctcgc-cctgtcacccaggctggagtgcagtggcgcaatcttggctcactgcaacctccacctcctgggttcaagtgattctcctgcctcagcctcccgagtagctggaaccacaggtgcaccccaccactcccagctgatttgtgtatttttt i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 938922 208 - 16193990 GGTTTCTTTTTT--------------TTTttttt-ttccttttctg---ttttttttttttttgagactgagtctcgc-cctgtcacccaggctggagtgcagtggcgcaatcttggctcactgcaacctccacctcctgggttcaagtgattctcctgcctcagcctcccgagtagctggaaccacaggtgcaccccaccactcccagctgatttgtgtctttttt i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1755920 194 - 21434487 GGtttc--tttt--------------gttttttt-ttcc----------------ttttttttgagatggaatcttgctcctgtcactcaggctggagtgcagtggcgcgatcttggctcactgcaacctccacctcctgggttcaagtgattctcctgcctcagcctcccgagtagctggaaccacaggtgcatgccaccactcccagctaatttgtgtatttttt i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4724773 208 - 82825804 GGTTTC--tttt--------------tttttttt-ttccttttttg-ttttttttttttttttgagactgagtctcgc-cctgtcacccaggctggagtgcagtggcacgatcttggctcactgcaacctccacctcctgggttcaagtgattctcctgcctcagccccccgagtagctggaaccacaggtgcaccccaccactcccagctaatttgtatatttttt i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 220127 222 + 2521317 GGtttc--ttttgtttttttttttccttttcttt-tttctttcttt-ttttttttttttttttgagactgagtctcac-cctgtcactcaggctggagtgcagtggcgcgatcttggctcactgcaacctccacctcctgggttcaagtgattctcctgcctcagcctcccgagtagctggaaccacaggtgcatgccaccactcccagctaatttgtgtatttttt i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1711177 205 - 2415367 GGtttc--------------------tttttttt-ttccttttcttttttcttttttttttttgagactgagtctcgc-cctgtcacccaggctggagtgcagtggcgcagtcttggctcactgcaacctccacctcctgggttcaagtgattctcctgcctcagcctcccgagtagctggaaccacaggtgcacgccaccactcccagctaatttgtgtatttttt i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64052647 194 + 204313951 GGtttt--------------------gtttttcc-tt----------ttttttttttctttttgagactgaatcttgc-tctgtcctccaggctggaatgcagtggttccatctctgctcactgcaacctccaccacctgggttcaagcaattctcctgcttcagcctcttgagtagctgggaccacaggtttgtgtgaccatggccgggtaatttttaca-ctttt i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2181717 192 + 10068113 GGtttt--------------------gtttttcc-------------tttttttttcctttttgagactgaatcttac-tctgtcccccaggctggaatgcagtggtgtgatctctgctcactgcaacctccacctcctgggttcaagcgattctcctgcctcagcctcttgagtagctgggaccacaggtttgtgtgaccatacctgggtaatttttaca-ttttt i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 37142 186 - 709587 GGtttt--------------------gtttttcc-tt----------ttttttttt--------agactgaatctcgc-tctgtcccccaggctggaatgcagtggtgtgatctctgctcactgcaacctccacctcctgggttcaagtgattctcctgcctcagcctcctgagtagcttggaccacaggtttgtgtgaccatgcccgggtaatttttaca-ttttt i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1138105 195 - 2246441 GGTttt--------------------gtttttccttt----------ttttctttttctttttgagactgaatcttgc-tctgtcccccaggctggaatgcagtggtgcgatctctgctcactacaacctccacctcctgggttcaagtgattctcctgcctcagcctcttgagtagctgggaccacaggtttgtgtgaccatgcccgggtaatttttata-ttttt i aotNan1.NW_018501968v1 C 0 C 0 s dasNov3.JH562710 228331 34 - 960158 -------------------------------------------------------------------------------------------GCTAGTGTGTCATGGT--------------------CCTACACTTACC-------------TTTTCT--------------------------------------------------------------------- i dasNov3.JH562710 C 0 C 0 e mm10.chr13 65971275 1869 - 120421639 I e otoGar3.GL873522 1209869 201 + 48283576 I e canFam3.chr4 37156612 615 + 88276631 I e proCoq1.NW_012152163v1 709354 7401 - 940639 I a score=88770.000000 s hg38.chr5_KI270795v1_alt 24826 8 + 131892 agtagaga s panTro5.chr5 5273297 8 - 181907262 agtagaga i panTro5.chr5 C 0 C 0 s panPan2.chr5 5535759 8 - 183735486 agtagaga i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1667583 8 + 3967317 agtagaga i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4485537 8 + 163208435 agtagaga i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5718255 8 - 180051392 agtagaga i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5910045 8 - 181584905 agtagaga i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 939130 8 - 16193990 agtagaga i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1756114 8 - 21434487 agtagaga i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4724981 8 - 82825804 agtagaga i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 220349 8 + 2521317 agtagaga i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1711382 8 - 2415367 agtagaga i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64052841 8 + 204313951 agtagaga i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2181909 8 + 10068113 agtagagg i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 37328 8 - 709587 agtagaga i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1138300 8 - 2246441 agtagaga i aotNan1.NW_018501968v1 C 0 C 0 e mm10.chr13 65971275 1869 - 120421639 I e otoGar3.GL873522 1209869 201 + 48283576 I e canFam3.chr4 37156612 615 + 88276631 I e proCoq1.NW_012152163v1 709354 7401 - 940639 I e dasNov3.JH562710 228365 0 - 960158 C a score=958229.000000 s hg38.chr5_KI270795v1_alt 24834 95 + 131892 tgaggtttcagcatgttg--gccaggctggtctcaaactcc----tgacctcagatgatctgcctgccttggcctccc-acgtgctgggattacaggcgtga s panTro5.chr5 5273305 95 - 181907262 cgaggtttcagcatgttg--gccaggctggtctcaaactcc----tgacctcagatgatctgcctgccttggcctccc-acgtgctgggattacaggcgtga i panTro5.chr5 C 0 C 0 s panPan2.chr5 5535767 95 - 183735486 cgaagtttcagcatgttg--gccaggctggtctcaaactcc----tgacctcagatgatctgcctgccttggcctccc-acgtgctgggattacaggcgtga i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1667591 95 + 3967317 cgaggtttcagcatgtta--gccaggctggtctcaaactcc----tgacctcagatgatctgcctgccttggcctccc-acgtgctgggattacaggcgtga i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4485545 95 + 163208435 cgaggtttcagcatgttg--gccaggctggtctcgaactcc----tgacctcagatgatctgcctgccttggcctccc-acgtgctgggattacaggcgtga i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5718263 95 - 180051392 caaggtttcagcatgttg--gccaggctggtctcgaactcc----tgacctcagatgatctgcctgccttggcctccc-aagtgctgggattacaggcgtga i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5910053 95 - 181584905 caaggtttcagcatgttg--gccaggctggtctcgaactcc----tgacctcagatgatctgcctgccttggccttcc-aagtgctgggattacaggcgtga i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 939138 95 - 16193990 caaggtttcagcatgttg--gccaggctggtctcgaactcc----tgacctcagatgatctgcctgccttggcctccc-aagtgctgggattacaggcgtga i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1756122 95 - 21434487 cgaggtttcagcatgttg--gccaggctggtctcgaactcc----tgacctcagatgatctgcctgccttggcctccc-aagtgctgggattacaggtgtga i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4724989 95 - 82825804 caaggtttcagcatgttg--gccaggctggtctcgaactcc----taacctcagatgatctgcctgccttggcctccc-aagtgctgggattacaggcgtga i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 220357 95 + 2521317 cgaggtttcagcatgttg--gccaggctggtctcgaactcc----tgacctcagacgatctgcctgccttggcctccc-aagtgctgggattacaggtgtga i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1711390 95 - 2415367 caaggtttcagcatgttg--gccaggttggtctcgaactcc----tgacctcagatgatctgcctgccttggcctccc-aagtgctgggattacagacgtga i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64052849 95 + 204313951 cagggtttcaccatgttg--gccaggctggtctcgaactcc----tgacctcagg-gatctgcccgtctcagcctcccaaagtgctgggattacaggggtga i calJac3.chr2 C 0 M 494 s saiBol1.JH378186 2181917 96 + 10068113 cgggggttcaccatgttg--gccaggctggtctcgaactcc----tgacctcaggtgatctgcccgcctcagcctcccaaagtgctgggcttacaggggtga i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 37336 96 - 709587 tggggttttaccatgttg--gccaggctggtctcaaactcc----tgacctcaggtgatctgctcgcctcagcctcccaaagtgctgggcttacaggggtga i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1138308 96 - 2246441 cggagtttcaccatgttg--gccaggctggtctcgaactcc----tgacctcaggtgatctgcccgcctcagcctcccaaagtgctgagattacaggggtga i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1210070 100 + 48283576 AGAAGTACAAGCTTGTGGAAGGCAGGCTAGCCCTTACTTTCCGGGTGGCCCCGAGCAACCT--CTGCACCAGCCTTTTATTGAGCCAGATCAACACAGGTGA i otoGar3.GL873522 I 201 C 0 e mm10.chr13 65971275 1869 - 120421639 I e canFam3.chr4 37156612 615 + 88276631 I e proCoq1.NW_012152163v1 709354 7401 - 940639 I e dasNov3.JH562710 228365 0 - 960158 C a score=107880.000000 s hg38.chr5_KI270795v1_alt 24929 15 + 131892 gccac-gcgcccagcA s panTro5.chr5 5273400 16 - 181907262 gccactgcgcccagcA i panTro5.chr5 C 0 C 0 s panPan2.chr5 5535862 16 - 183735486 gccactgcgcccagcA i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1667686 16 + 3967317 gccactgcgcccagcA i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4485640 16 + 163208435 gccactgcgcccagcA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5718358 16 - 180051392 gccactgcgaccagcA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5910148 16 - 181584905 gccactgcgaccagca i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 939233 16 - 16193990 gccactgcgaccagcA i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1756217 16 - 21434487 gccactgcaaccagcA i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4725084 16 - 82825804 gccactgcgaccagcA i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 220452 16 + 2521317 gccaccgcaaccagcA i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1711485 16 - 2415367 gctactgtgaccagcA i colAng1.NW_012115755v1 C 0 C 0 s saiBol1.JH378186 2182013 16 + 10068113 gtcaccacgcccAACA i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 37432 16 - 709587 gtcaccacgcccAACA i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1138404 16 - 2246441 ctcaccacgcccAACA i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1210170 1 + 48283576 ---------------G i otoGar3.GL873522 C 0 C 0 e mm10.chr13 65971275 1869 - 120421639 I e calJac3.chr2 64052944 494 + 204313951 M e canFam3.chr4 37156612 615 + 88276631 I e proCoq1.NW_012152163v1 709354 7401 - 940639 I e dasNov3.JH562710 228365 0 - 960158 C a score=1444082.000000 s hg38.chr5_KI270795v1_alt 24944 156 + 131892 GGATGTggtttcttgaggatcctttc------agggctttggcctctccc------agctcctat----------cccactactattagggtcacag---aggaggaggtcaagactgggatttaccc--atgaaggctctttggat-gaaatcagctggatattggctgggtcactttgttaa-- s panTro5.chr5 5273416 156 - 181907262 GGATGTggtttcttgaggatcctttc------agggctttggcctctccc------agctcctat----------cccactattattagggtcacag---aggaggaggtcaagactgggatttatcc--atgaaggctctttggat-gaaatcagctggatattggctgggtcactttgttaa-- i panTro5.chr5 C 0 C 0 s panPan2.chr5 5535878 156 - 183735486 GGATGTggtttcttgaggatcctttc------agggctttggcctctccc------agctcctat----------cccactattattagggtcacag---aggaggaggtcaagactgggatttatcc--atgaaggctctttggat-gaaatcagctggatattggctgggtcactttgttaa-- i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1667702 156 + 3967317 GGATGTggtttcttgaggatcctttc------agggctttggcctctccc------agctcctat----------cccactattattagggtcacag---aggaggaggtcaagactgggatttaccc--atgaagcctttttggat-gaaatcagctggatattggctgggtcactttgttaa-- i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4485656 154 + 163208435 GGATGTggtttcttgaggatcctttc------agggctttggcctctccc------agctcctat----------cccactattattagggtcacag---aggaggaggtcaagac--ggatttaccc--atgaagcctttttggat-gaaatcagctggatattggctgggtcagtttgttaa-- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5718374 156 - 180051392 GGATGTggtttcttgaggatcctttc------agggctttggcctctccc------agctccttt----------cccactattattagggtcacag---agaaggatgtcaagactgggattgaccc--atgaaggctttttggat-gaaatcagctggatattggctgggtcactttgttaa-- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5910164 156 - 181584905 ggatgtggtttcttgaggatcctttc------agggctttggcctctccc------agctccttt----------cccactattattagggtcacag---agaaggatgtcaagactgggattgaccc--atgaaggctttttggat-gaaatcagctggatattggctgggtcactttgttaa-- i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 939249 156 - 16193990 GGATGTggtttcttgaggatcctttc------agggctttggcctctccc------agctccttt----------cccactattattagggtcacag---agaaggatgtcaagactgggattgaccc--atgaaggctttttggat-gaaatcagctggatattggctgggtcactttgttaa-- i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1756233 159 - 21434487 GGATGTggtttcttgagactcctttc------agggctttggcctctccc------agctcctct----------cccactattattagggtcacagttcagaaggatgtcaagactgggattgaccc--atgaaggctttttggat-gaaatcagctggatattgactgggtcactttgttaa-- i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4725100 159 - 82825804 GGATGTGGTTTCTTGAGGATCCTTTC------AGGGCTTTGGCCTCTCCT------AGCTCCTTT----------CCCACTATTATTAGGGTCACAGTTCAGAAAGATGTCAAGACTGGGATTGACCC--ATGAAGGCTTTTTGGAT-GAAATCAGCTGGATATTGGCTGGGTCACTTTGTTAA-- i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 220468 159 + 2521317 GGATGTggtttcttgagactcctttc------agggctttggcctctccc------agctcctct----------cccactattattagggtcacagttcagaaggatgtcaagactgggattgaccc--atgaaggctttttggat-gaaatcagctggatattggctgggtcactttgttaa-- i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1711501 156 - 2415367 GGATGTGGTTTATTgaggatcctttc------agggctttggcctctccc------agctcctat----------cacactattattagggtcacaa---agaaggatgttaagactgagactgaccc--atgaaggctttttggat-gaaatcagctggatattggctgggtcactttgttaa-- i colAng1.NW_012115755v1 C 0 C 0 s saiBol1.JH378186 2182029 155 + 10068113 GGATGTGGTTTCTTgaggatcctttc------agggctttggcctcttac------agctcctat----------cccactattattagggttaca----agatggaggtcaagagtgggatttaccc--acaaaggctttttggat-gaaatcagctggatattggctgggtcacttggttaa-- i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 37448 140 - 709587 GGATGTGGTTTCTTGAGGATCCTTTC------AGGGCTTTGGCCTCTCCC------AGCTCCTGT----------CCC---------------ACA----AGATGGAGGTCAAGAGTGGGATTTACCC--ACAAAGGCTTTTTGGAT-GAAATCAGCTGGATATTGGCTGGGTCACTTGGTTAA-- i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1138420 155 - 2246441 GGATGTGGTTTCTTgaggatcctttc------agggctttggcctctccc------agctcctat----------cccactattattagggtcaca----agatggaggtcaagagtgagatttaccc--acaaaggctttttggat-gaaatcagctggatattggcttggtcacttggttta-- i aotNan1.NW_018501968v1 C 0 I 1 s otoGar3.GL873522 1210171 164 + 48283576 GGGAGTAA----TTAACAATGTCTTCGTGCTGAGGGCACGGGCTCCTCCCACAAGGAACTCCTGTGGAGGAATGGCCCG--------AGGTCCACGCCTCAGCTGCAGATCA--------TCTTGCTCGGATGTTGGCGTCTCCTACAGAAATCAGCTAGAAATTGGCTGGGTCAGTAAGCTCA-- i otoGar3.GL873522 C 0 C 0 s dasNov3.JH562710 228365 157 - 960158 GGGTGTGGGCACCTGAGGACTGCTT-------AAGGCTCTGGCTTCTGCC------ACTACCCAT----------CCAAGTATTACTAGGGTCATGG---AGAAGGAAGTCAAGACTGGGATTTGCTC--ACAAAGGCATTTTGGAT-GGTATCAGTTGGACCTCAACCTGGTTGCTCCATTTAAC i dasNov3.JH562710 C 0 C 0 e mm10.chr13 65971275 1869 - 120421639 I e calJac3.chr2 64052944 494 + 204313951 M e canFam3.chr4 37156612 615 + 88276631 I e proCoq1.NW_012152163v1 709354 7401 - 940639 I a score=41072.000000 s hg38.chr5_KI270795v1_alt 25100 3 + 131892 aga s panTro5.chr5 5273572 3 - 181907262 aga i panTro5.chr5 C 0 C 0 s panPan2.chr5 5536034 3 - 183735486 aga i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1667858 3 + 3967317 aga i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4485810 3 + 163208435 aga i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5718530 3 - 180051392 aga i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5910320 3 - 181584905 aga i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 939405 3 - 16193990 aga i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1756392 3 - 21434487 aga i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4725259 3 - 82825804 AGA i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 220627 3 + 2521317 aga i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1711657 3 - 2415367 aga i colAng1.NW_012115755v1 C 0 I 7 s calJac3.chr2 64053438 3 + 204313951 AGA i calJac3.chr2 M 494 C 0 s saiBol1.JH378186 2182184 3 + 10068113 aga i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 37588 3 - 709587 AGA i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1138576 3 - 2246441 aga i aotNan1.NW_018501968v1 I 1 C 0 s otoGar3.GL873522 1210335 3 + 48283576 GGA i otoGar3.GL873522 C 0 C 0 s dasNov3.JH562710 228522 3 - 960158 AGA i dasNov3.JH562710 C 0 C 0 e mm10.chr13 65971275 1869 - 120421639 I e canFam3.chr4 37156612 615 + 88276631 I e proCoq1.NW_012152163v1 709354 7401 - 940639 I a score=117666.000000 s hg38.chr5_KI270795v1_alt 25103 16 + 131892 ccagaacctggggtgg s panTro5.chr5 5273575 16 - 181907262 ccagaacctggggtgg i panTro5.chr5 C 0 C 0 s panPan2.chr5 5536037 16 - 183735486 ccagaacctggggtgg i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1667861 16 + 3967317 ccagagcctggggtgg i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4485813 16 + 163208435 ccagaacctggggtcg i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5718533 16 - 180051392 ccggaacctgctgcgg i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5910323 16 - 181584905 ccggaacctgctgcgg i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 939408 16 - 16193990 ccggaatctgctgcgg i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1756395 16 - 21434487 ccggaacctgcggcgg i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4725262 16 - 82825804 CCGGAACCTGCGGTGG i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 220630 16 + 2521317 ccggaacctgcggcgg i manLeu1.NW_012103943v1 C 0 C 0 s calJac3.chr2 64053441 16 + 204313951 CCAGAACCTGTGCTGG i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2182187 16 + 10068113 ccagaacctgtgctgg i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 37591 16 - 709587 CCAGAACCTGTGCTGG i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1138579 16 - 2246441 ccagaacctgtgctgg i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1210338 15 + 48283576 CTAGAACTTGTATGG- i otoGar3.GL873522 C 0 C 0 s dasNov3.JH562710 228525 16 - 960158 GCAGAACTTGTATGGA i dasNov3.JH562710 C 0 C 0 e mm10.chr13 65971275 1869 - 120421639 I e canFam3.chr4 37156612 615 + 88276631 I e proCoq1.NW_012152163v1 709354 7401 - 940639 I e colAng1.NW_012115755v1 1711660 7 - 2415367 I a score=78317.000000 s hg38.chr5_KI270795v1_alt 25119 6 + 131892 gaagcc s panTro5.chr5 5273591 6 - 181907262 gaagcc i panTro5.chr5 C 0 C 0 s panPan2.chr5 5536053 6 - 183735486 gaagcc i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1667877 6 + 3967317 gaagcc i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4485829 6 + 163208435 gaagcc i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5718549 6 - 180051392 gaagcc i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5910339 6 - 181584905 gaagcc i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 939424 6 - 16193990 gaagcc i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1756411 6 - 21434487 gaagcc i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4725278 6 - 82825804 GAAGCC i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 220646 6 + 2521317 gaagcc i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1711667 6 - 2415367 aaagcc i colAng1.NW_012115755v1 I 7 C 0 s calJac3.chr2 64053457 6 + 204313951 GAAGCC i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2182203 6 + 10068113 gaagcc i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 37607 6 - 709587 GAAGCC i cebCap1.NW_016107999v1 C 0 M 1310 s aotNan1.NW_018501968v1 1138595 6 - 2246441 gaagcc i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1210353 6 + 48283576 GAGACC i otoGar3.GL873522 C 0 C 0 s dasNov3.JH562710 228541 6 - 960158 AAAGCT i dasNov3.JH562710 C 0 C 0 e mm10.chr13 65971275 1869 - 120421639 I e canFam3.chr4 37156612 615 + 88276631 I e proCoq1.NW_012152163v1 709354 7401 - 940639 I a score=79855.000000 s hg38.chr5_KI270795v1_alt 25125 7 + 131892 tgtgcct s panTro5.chr5 5273597 7 - 181907262 tgtgcct i panTro5.chr5 C 0 C 0 s panPan2.chr5 5536059 7 - 183735486 tatgcct i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1667883 7 + 3967317 tgtgcct i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4485835 7 + 163208435 tgtgcct i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5718555 7 - 180051392 tgtgcct i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5910345 7 - 181584905 tgtgcct i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 939430 7 - 16193990 tgtgcct i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1756417 7 - 21434487 tgtgcct i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4725284 7 - 82825804 TGTGCCT i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 220652 7 + 2521317 tgtgcct i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1711673 7 - 2415367 tgtgcct i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64053463 7 + 204313951 TGTGCCT i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2182209 7 + 10068113 tgtgcct i saiBol1.JH378186 C 0 C 0 s aotNan1.NW_018501968v1 1138601 7 - 2246441 tgtgcct i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1210359 7 + 48283576 TATGCCT i otoGar3.GL873522 C 0 C 0 s dasNov3.JH562710 228547 7 - 960158 TACACTT i dasNov3.JH562710 C 0 C 0 e cebCap1.NW_016107999v1 37613 1310 - 709587 M e mm10.chr13 65971275 1869 - 120421639 I e canFam3.chr4 37156612 615 + 88276631 I e proCoq1.NW_012152163v1 709354 7401 - 940639 I a score=2182763.000000 s hg38.chr5_KI270795v1_alt 25132 224 + 131892 gtttggatgtcagagcccac---agccatgggcccctggcccagcttcctaaccaGTTTGG-----CCCTATTTGCCTTGGAagcacttgggctgtggggtcaaatggtcccacgcgctgatcttggccttggcgcttgctggctgcatgaacatgagtacatcttgtcacctgtcccagtttcagtctctctatTCTGGGCAGAAGGATTTTCTCACCAACAAGGACTAAG s panTro5.chr5 5273604 224 - 181907262 gtttggatgtcagagcccac---agccatgggaccctggcccagcttcctaaccagtttgg-----ccctatttgccttggaagcacttgggctgtggggtcaaatggtcccacgcgctgatcttggccttggcgcttgctggctgcatgaacatgagtacatcttgtcacctgtcccagtttcagtctctctatTCTGGGCAGAAGGATTTTCTCACCGACAAGGACTAAG i panTro5.chr5 C 0 C 0 s panPan2.chr5 5536066 224 - 183735486 gtttggatgtcagagcccac---agccatgggaccctggcccagcttcctaaccagtttgg-----ccctatttgccttggaagcacttgggctgtggggtcaaatggtcccacgcgctgatcttggccttggcgcttgctggctgcatgaacatgagtacatcttgtcacctgtcccagtttcagtctctctatTCTGGGCAGAAGGATTTTCTCACCGACAAGGACTAAG i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1667890 224 + 3967317 gtttggatgtcagagcccac---agccatgggaccctggcgctgcttcctaaccaGTTTGG-----CCCTATTTGCCTTGGAAGCATTTgggctgtggggtcaaatggtcccatgctctgatcttggccttggcgcttgctggctgcatgaacatgagtacatcttgtcacctgtcccagtttcagtctctctatTCTGGGCAGAAGGATTTTCTCACCGACAAGGACTAAG i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4485842 222 + 163208435 gtttggatgtcagggcccac---aggcatgggaccctggcccagcttcctaaccaGTTTGG-----CCCTATTtgccttggaagcacttgggctgtggggtcaaatggtcccacaccctgatcttggccttgccgcttgctggctgcatgaacatgagcacatcttgtcacctgtcccagtttcag--tctcTATTCTGGGCAGAAGGATTTTCTCACAGACAAGGACTAAG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5718562 215 - 180051392 gtttggatatcagagcccac---aggcatgggacccgggccc---------acCAGTTGGG-----CCCTATTtgccgtggaagcacttgggctgtggggtcaaatggtcccatgccctgatcttggccttgccacttgctggctgcatgaacatgagcacgtctcgtcacctgtcccagtatcagtttctccatTCTGGGTGGAAGGATTTTCTCACAGACAAGGACTAAG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5910352 215 - 181584905 gtttggatatcagagcccac---aggcatgggacccgggccc---------acCAGTTGGG-----CCCTATTtgccgtggaagcacttgggctgtggggtcaaatggtcccatgccctgatcttggccttgccacttgctggctgcatgaacatgagcacgtcttgtcacctgtcccagtatcagtctctccatTCTGGGCGGAAGGATTTTCTCACAGACAAGGACTAAG i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 939437 215 - 16193990 gtttggatatcagagcccac---aggcatgggacccgggccc---------acCAGTTGGG-----CCCTATTtgccgtggaagcacttgggctgtggggtcaaatggtcccatgccctgatcttggccttgccacttgctggctgcatgaacatgagcacgtcttgtcacctgtcccagtatcagtctctccattctgGGCGGAAGGATTTTCTCACAGACAAGGACTAAG i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1756424 224 - 21434487 gtttggatatcagagcccac---aggcatgggacccgggcccagcttcctaaccaGTTGGG-----CCCTGTTtgccgtggaagcacttggactgtggggtcaaatggtcccatgccctgatcttggccttgccacttgctggctgcatgaacatgagcacatcttgtcacctgtcccagtatcagtctctccatTCTGGGCGGAAGGATTTTCTCACAGACAAGGACTAAG i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4725291 224 - 82825804 GTTTGGATATCAGAGCCCAC---AGGCATGGGACCCGGGCCCAGCTTCCTAACCAGTTGGG-----CCCTATTtgccgtggaagcacttgggctgtggggtcaaatggtcccatgccctgatcttggccttgccacttgctggctgcatgaacatgagcacatcttgtcacctgtcccagtatcagtctctccatTCTGGGCGGAAGGATTTTCTCACAGACAAGGACTAAG i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 220659 224 + 2521317 gtttggatatcagagcccac---aggcatgggacccgggcccagcttcctaaccaGTTGGG-----CCCTATTTGCCGTGCAagcacttgggctgtggggtcaaatggtcccatgccctgatcttggccttgccacttgctggctgcatgaacataagcacatcttgtcacctgtcccagtatcagtctctccatTCTGGGCGGAAGGATTTTCTCACAGACAAGGACTAAG i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1711680 224 - 2415367 gtttggatatcagagcccac---aggcaggggaccggggcccagcttcctaaccagttggg-----ccctatttgccttggaagcacttgggctgtggggtcaaatggtcccatgccctgatcttggccttgctgcttgctggctgcatgaacatgagcacatcttgtcacctgtcccagtatcagtctctccatTCTGGGCAGAAGGATTTTCTCACAGACAAGGACTAAG i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64053470 225 + 204313951 GTTTGGATGTCAGAGCCTCTATCAGGTGTGGGACCCTGGCCCAGCTTCCACACCAGTTTGG-----CCCTATTTGCCTtggaaacacttcggctgtggggtcaaatggtcccatgccctgatcttggccttgccgcttgctggctctatgaacatgggcacatcctgtcacctgtcccagcttcag--tctccATTCTGGGCAGAAGGATTTTCTCACAAACAAGGTCTAAG i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2182216 219 + 10068113 gtttggatgtcagagcctag---aggcgtgggaccctggcccagcctcca-agcagcttgg-----ccctatttgccttggaa--acttcggctgtggggtcaaatggtcccatgccctgatcttggccttgtcgcttgctggctctgtgaacatgggtacatcctgtcacctgtcccagcttcag--tgtccATTCTGGGCAGAAGGATTTTCTCACAGACAAGGACTAAG i saiBol1.JH378186 C 0 C 0 s aotNan1.NW_018501968v1 1138608 222 - 2246441 gtttggatgtcagagcccac---aggcgtaggaccctggcccagcttccacaccagtttgg-----ccctatttgccttggaaaCACTTCggctgtggggtcaaatggtcccatgccctgatcttggccttgccacttgctggctctatgaacatgggcacatcctgtcacctgtcccagcttcag--tctccATTCTGGGCAGAAGGATTTTCTCACAGACAAGGACTAAG i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1210366 216 + 48283576 ATTCACATATTAGTGTGCAG---AGTTGTGGGACTCTGGCCCTGCTTCCTCACCAATTTGG-----CCCTACATGGCTTGGAAGTGCTTGGATAGT--GGTCCAATGGTCCTAGGCTCTGATCTTAGCCTTGTCTCTTGTTGGTTATGTGAATGTGA--CGGTCTTGTCATATATC----TGTCATGCTCTCTATTGTAGGCAGAAGGATTTTTTCATAGGCAAGAAAAAAG i otoGar3.GL873522 C 0 I 633 s mm10.chr13 65973144 189 - 120421639 GTTGGCATCTCAGCATCCAC---AGGTGTGTGACCCTGACTCCGCTT-CTAATCAGTTTGGTTGGCTCTTTTGGGGGTTGGAAGCTCTTGGACAGCAATGTCACGTGGCCTCAGGCTTT---------------------TGGCTGCAGGCA----GGCAGATCTT--------TCCCAAGTGC----TCACCTCCCCAAGCAG--GGGCTTTTCCACAGGTGAGGAGGGAG i mm10.chr13 I 1869 C 0 s dasNov3.JH562710 228554 195 - 960158 GTTTGGAAGTCAGAGCTTGC---AGGCCTCTGGCC-TGGTCCAGCTCTGTAACcagctggg--------------------aagcacttgggctgaggtgtcagatggccctgggctgtcatcttggccttgctgcttgctagctgcatgaatgtgggcaagtctggtcccttctctggacatcaA-------------GGCAATGGGATTTCCCCACAGGCTAGGAATCAT i dasNov3.JH562710 C 0 C 0 e cebCap1.NW_016107999v1 37613 1310 - 709587 M e canFam3.chr4 37156612 615 + 88276631 I e proCoq1.NW_012152163v1 709354 7401 - 940639 I a score=69247.000000 s hg38.chr5_KI270795v1_alt 25356 9 + 131892 TACCCTCCT s panTro5.chr5 5273828 9 - 181907262 TACCCTCCT i panTro5.chr5 C 0 C 0 s panPan2.chr5 5536290 9 - 183735486 TACCCTCCT i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1668114 9 + 3967317 TACCCTCCT i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4486064 9 + 163208435 TACCCTCCT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5718777 9 - 180051392 TGTGCTCCT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5910567 9 - 181584905 TGTGCTCCT i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 939652 9 - 16193990 TGTGCTCCT i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1756648 9 - 21434487 TGTGCTCCT i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4725515 9 - 82825804 TGTGCTCCT i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 220883 9 + 2521317 TGTGCTCCT i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1711904 9 - 2415367 TATGCTCCT i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64053695 9 + 204313951 TATCCTCCT i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2182435 9 + 10068113 TATCCTCCT i saiBol1.JH378186 C 0 C 0 s aotNan1.NW_018501968v1 1138830 9 - 2246441 TATCCTCCT i aotNan1.NW_018501968v1 C 0 C 0 s mm10.chr13 65973333 9 - 120421639 TGTCTTCCG i mm10.chr13 C 0 C 0 s dasNov3.JH562710 228749 9 - 960158 TATCATGAt i dasNov3.JH562710 C 0 C 0 e cebCap1.NW_016107999v1 37613 1310 - 709587 M e otoGar3.GL873522 1210582 633 + 48283576 I e canFam3.chr4 37156612 615 + 88276631 I e proCoq1.NW_012152163v1 709354 7401 - 940639 I a score=2894787.000000 s hg38.chr5_KI270795v1_alt 25365 314 + 131892 --GTAGGCTCAGGACTAGGGCAGAGCTTGTA---CACGATAGAGGAGATGCTCGATCGGG----------TTCTCTC----------------------TCCA-------------------AGT--------------------CCTGCTTCTCATGGATTT-------AAGGG-----------------------------------------GCTGTGGAGGGCCTGACTGCTGTGCT---GAGTTAGGCCCGGGGCCTGCCAGTGGAGTTCTAAGGCCTTTAAAGAGTTT--GAGTTGTGTTTT-AGGAAGA-CCACCTGGGGCAGTGTGGAAATGTCATGATTGAGGGAGAGAGTTTCTTGAAGCAACTCCGTCTAGTGcagagcttctcaagctagggtgcatcta-agtatctggaggagctgttaaagcacgtgttg s panTro5.chr5 5273837 314 - 181907262 --ATAGGCTCAGGACTGGGGGAGAGCTTGTA---CACGATAGAGGAGATGCTCGATCGGG----------TTCTCTC----------------------TCCA-------------------AGT--------------------CCTGCTTCTCATGGATTT-------AAGGG-----------------------------------------GCTGTGGAGGGCCTGACTGCTGTGCT---GAGTTAGGCCCGGGGCCTGCCGGTGGAGTTCTAAGGCTTTTAAAGAGTTT--GAGTTGTGTTTT-AGGAAGA-CCACCTGGGGCAGTGTGGAAATGTCATGATTGAGGGAGAGAGTTTCTTGAAGCAACTCCATCTAGTGcagagcttctcaagctagggtgcatcta-agtatctggaggagctgttaaagcacgtgttg i panTro5.chr5 C 0 C 0 s panPan2.chr5 5536299 314 - 183735486 --ATAGGCTCAGGACTGGGGGAGAGCTTGTA---CACGATAGAGGAGATGCTCGATCGCG----------TTCTCTC----------------------TCCA-------------------AGT--------------------CCTGCTTCTCATGGATTT-------AAGGG-----------------------------------------GCTGTGGAGGGCCTGACTGCTGTGCT---GAGTTAGGCCCGGGGCCTGCCAGTGGAGTTCTAAGGCTTTTAAAGAGTTT--GAGTTGTGTTTT-AGGAAGA-CCACCTGGGGCAGTGTGGAAATGTCATGATTGAGGGAGAGAGTTTCTTGAAGCAACTCCATCTAGTGcagagcttctcaagctagggtgcatcta-agtatctggaggagctgttaaagcacgtgttg i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1668123 315 + 3967317 --GTAGGCTCAGGACTAGGGGAGAGCTTGTA---CACGATAGAGGAGATGCTCGATCGTG----------TTCTCTC----------------------TCCA-------------------AGT--------------------CCTGCTTCTCATGGATTT-------AAGGG-----------------------------------------GCTGTGGAGGGCCTGACTGCTGTGCT---GAGTTAGG-CCGGGGCCTGCCAGTGGAGTTCTAAGGCCTTTAAAGAGTTTAAGAGTTGTGTTTT-AGGAAGA-CCACCTGGGGCAGTGTGGAAATGTCATGATCGAGGGAGAGAGTTTCTTGAAGCAACTCCGTCTAGTGcagagcttctcaagctagggtgcatcta-agtatctggaggagctgttaaagcacgtgttg i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4486073 320 + 163208435 --GTAGGCTCAGGACTAGGGGAGAGCTTGTA---CACGATACAGGAGATGCTCGATCAGG----------TTCTCTCCCC------------------TTCCA-------------------AGT--------------------CCTGCTTCTCATGGATTT-------AAGGG-----------------------------------------GCTGTGGAGGCCCTGACCTCTGTGCT---GAGTTAGGCCTGGGGCCTGCCAGTGGAGTTCTAAGGTCTTTAAAGAGTTTAAGAGTTGTGTTTT-AGGAAGA-CCACCTGGGGCAGTGTGGAAATGTCATGATTGAGGGAGAGAGTTTCTTGAAGCAGCTCTGTCTAGTGcagagcctctcaagctagggtgcatctg-agtatctggaggagctgttaaagcacatgttg i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5718786 319 - 180051392 --GTAGGCTCAGGACTGGGGGAGAGCCTGTA---CATGATACAGGAGATGCTCGATCAGG----------TTCTCTCCCT------------------GTCCA-------------------AAT--------------------CCTGCTTCCCGTGGATTT-------AAGGG-----------------------------------------GCTGTGAAGGGCCTGACCGCTGTGCG---GAGTTAGGCCCAAGGCCTGCCAGTGGAGCTGTAAGGCCTTTAAAGAGCTA-AGAGTTGTGTTTT-AGAAAGA-CCGCCTGGGGCAGTGTGGAAATGCCATGGTTGAGGGAGGGAGTTGATTGAAGCAGCTCCATCTAGTGcagagcttctcaagcgagggtgcatctg-agtatctggaggagctgtgaaagcacgtgttg i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5910576 319 - 181584905 --GTAGGCTCAGGACTGGGGGAGAGCCTGTA---CATGATACAGGAGATGCTCGATCAGG----------TTCTCTCCCC------------------GTCCA-------------------AGT--------------------CCTGCTTCCCGTGGATTT-------AAGGG-----------------------------------------GCTGTGAAGGGCCTGACCGCTGTGCG---GAGTTAGGCCCAAGGCCTGCCAGTGGAGCTGTAAGGCCTTTAAAGAGCTA-AGAGTTGTGTTTT-AGAAAGA-CCGCCTGGGGCAGTGTGGAAATGCCATGGTTGAGGGAGGGAGTTGATTGAAGCAGCTCCATCTAGTGcagagcttctcaagcgagggtgcatctg-agtatctggaggagctgtgaaagcacgtgttg i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 939661 319 - 16193990 --GTAGGCTCAGGACTGGGGGAGAGCCTGTA---CATGATACAGGAGATGCTCGATCAGG----------TTCTCTCCCC------------------GTCCA-------------------AGT--------------------CCTGCTTCCCGTGGATTT-------AAGGG-----------------------------------------GCTGTGAAGGGCCTGACCGCTGTGCG---GAGTTAGGTCCAAGGCCTGCCAGTGGAGCTGTAAGGCCTTTAAAGAGCTA-AGAGTTGTGTTTT-AGAAAGA-CCGCCTGGGGCAGTGTGGAAATGCCATGGTTGAGGGAGGGAGTTGATTGAAGCAGCTCCATCTAGTGcagagcttctcaagcaagggtgcatctg-agtatctggaggagctgtgaaagcacgtgttg i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1756657 319 - 21434487 --GTAGGCTCAGGACTGGGGGAGAGCCTGTA---CATGATACAGGACATGCTCGATCAGG----------TTCTCTCCCC------------------GTCCA-------------------AGT--------------------CCTGCTTCCCGTGGATTT-------AAGGG-----------------------------------------GCTGTGAAGGGCCTGACCGCTGGGCG---GAGTTAGGCCCAAGGCCTGCCAGTGGAGCTGTAAGGCCTTTAAAGAGCTA-AGAGTTGTGTTTT-AGAAAGA-CCGCCTGGGGCAGTGTGGAAATGCCATGGTCCAGGGAGGGAGTTGCTTGAAGCAGCTCCATCTAGTGcagagcttctcaagcgagggtccatctg-agtatctggaggagctgtgaaaacacgtgttg i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4725524 319 - 82825804 --GTAGGCTGAGGACTGGGGGAGAGCCTGTA---CATGATACAGGACATGCTCGATCAGG----------TTCTCTCCCC------------------GTCCA-------------------AGT--------------------CCTGCTTCCCGTGGATTT-------AAGGG-----------------------------------------GCTGTGAAGGGCCTGACCGCTGTGCG---GAGTTAGGCCCAAGGCCTGCCAGTGGAGCTGTAAGGCCTTTAAAGAGCTA-AGAGTTGTGTTTT-AGAAAGA-CCGCCTGGGGCAGTGTGGAAATGCCGTGGTTGAGGGAGGGAGTTGCTTGAAGCAGCTCCATCTAGTGcagagcttctcaagcgagggtgcatctg-agtatctggaggagctgtgaaagcacgtgttg i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 220892 319 + 2521317 --GTAGGCTCAGGACTGGGGGAGAGCCTGTA---CATGATACAGGACATGCTCGATCAGG----------TTCTCTCCCC------------------GTCCA-------------------AGT--------------------CCTGCTTCCCGTGGATTT-------AAGGG-----------------------------------------TCTGTGAAGGGCCTGACCGCTGTGCG---GAGTTAGGCCCAAGGCCTGCCAGTGGAGCTGTAAGGCCTTTAAAGAGCTA-AGAGTTGTGTTTT-AGAAAGA-CCGCCTGGGGCAGTGTGGAAATGCCATGGTTGAGGGAGGGAGTTGCTTGAAGCAGCTCCATCTAGTGcagagcttctcaagcgagggtgcatctg-agtatctggaggagctgtgaaagcacgtgttg i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1711913 319 - 2415367 --GTAGGCTCAGGACTGGGGGAGAGCCTGTA---CATGATACAGGACATGCTCAATCAGG----------TTCTCTCCCC------------------ATCCA-------------------AGT--------------------CCTGCTTCCCGTGGATTT-------AAGGG-----------------------------------------GCTGTGAAGGGCCTGACCACTGTGTT---GAGTTAGGCCCAAGGCCTGCCAGTGGAGCTGTAAGGCCTTTAAAGAGCTA-AGAGTTGTGTTTT-AGAAAGA-CCACCTGGGGCAGTGTGGAAATGCCATGATTGAGGGAGGGAGTTGCTTGAAGCAGCTCCATCTAGTGcagagcttctcaagcgagggtgcatctg-agaatctggaggagccgtgaaagcacgtgttg i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64053704 308 + 204313951 --GTGGGCTCAGGACTCTGGGAGAGCTTGCA---CATGATACAGGAGATGGTTGATCAGG----------TTCTCCCTC--------------------TCCA-------------------AGC--------------------CCTGCTTCCAATGGATTT-------AAGGG-----------------------------------------GCTGTGAAGGGCCTGACCACTGTGCT---GAGTTAGGCCCAAGGCCGG-CAGTGGAGCTGTAAGGCCTTTAAAGAGTTA--------TGGTTT-AGGAAGA-CCACCTGGGTCAGTGTGGAAATGTCATGATTTAGGGACAGAGTTT-TTGAAGCAACTCTGCCTAGTGcagtgcttctcaagctagggtgcatctg-agtatctggagtagctgttaaagcacgtgttg i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2182444 315 + 10068113 --GTGGGCTCGGGACTGGGGGAGAGCTTGCA---CATGATACAGGAGATGGTTGATCAGG----------TTCTCCCTC--------------------TTCA-------------------AGC--------------------ACTGCTTCCAGTGGATTG-------AAGGG-----------------------------------------GCTGTGAA-GGCCTCACCACTGTGCT---GAGTTAGGCCCAAGGCCGGCCAGTGGAACTGTAAGGTCTTTAAAGAGTTA-AGGGTTGTGTTTT-AGGAAGA-CCACCTGGGTCAGTGTGGAAATGTCATGATTTAGGGACAGAGTTT-TTGAAGCAACTCTGTCTAGTGcagcgcttctcaagctagggtgcatctg-agtatctggaggagctgttaaagcacgtgttg i saiBol1.JH378186 C 0 C 0 s aotNan1.NW_018501968v1 1138839 315 - 2246441 --GTGGGCTCGGGACTGGGGGAGAGCTTGCA---CGTGATACAGGAGATGTTTGATCAGG----------TTCTCCCTC--------------------TCCA-------------------AGC--------------------CCTGCTTCCAATGGATTT-------AAGGA-----------------------------------------GCTGTGAAGGGCCTGACCACTGTGCT---GAGTTAGGCCCAAGGCCGGCCAGTGGAGCTGTAAGG-CTTTAAAGAGTTA-AGAGTTGTGTTTT-AGGAAGA-CCACCTGGGTCAGTGTGGAAATGTCATGATTTAGGGACAGAGTTT-TTGAAGCAACTCTGTCTAGTGcagcgcttctcaagctagggtgcatctg-agtatctggaggagctgttaaagcacgcgttg i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1211215 354 + 48283576 --GTAGGCCCAGCCCTAGCAGGGAGCTTGCACGTCGTAACACAGAAGGTGCTCAGTGAGG----------GTCTGTCTCC-------------------TTTA-------------------AAC--------------------CCTGCCTCCAATGGATTT-------AAGGGCTGGTGACTGGAGGGCTAGATAAGCAGAT----TGAGGCCAGCCCTGAGGGGTATGACTGCTGTGCTGAGGAGTTAGACCCAAGGCCTGCCAGAGGGATTTTAAAGCCTTTAAGCAATTA-AGAGTTGTATTTT-GGTAAGA-CTGCCTGGGGCAGCATGGAAACTTGAAGATTTACGGAGCGAGTTC-TTGAAGCAGCT-----TGGTATGGTGCTTCATAAGGTACGGTGCATTTG--GTCcctaaagggcctgttaaaacacatgttg i otoGar3.GL873522 I 633 C 0 s mm10.chr13 65973342 332 - 120421639 --GTGAGCTCCGCTCTAAGG--GGGCTCTCT---CACAGCCCCGAAAGCACTCCTTCAGT----------TAGGCTTTGC------------------GCTCAGAGAGAGTTTCCGAGAGAGAGC--------------------CCCGCTTATTGCTTATTTCTCGCTAAAGGG----------------------AGGAGGTGG--TGGGGCTGGCTGTGAAGGGGCCAACAGTTGAGCT---AAG--------GGGGTCAGCTTAAGTGCCTTGCCGGTCTTTAAGCAGTTG-GAAGTTCTGTTTTAAGAAAGA-CCACCTGGGGCAGTGTGGAGCCTTGCAGATCAGAAGGGAGCAATGCTGGAGGCTGCT---------GCATAGCTTC-----------TGC-TCAG-AAAAGCCGCAGAATCAGCTTAAACTCCTGCTG i mm10.chr13 C 0 C 0 s dasNov3.JH562710 228758 395 - 960158 gtgtcagttc----ctaggggagagcttgcg---cac---acagaaggtgctcagtCAGAGTGAAAGCCCTCCACCCCCCGCACACAGAAGGTGCTCAGTCAA-------------------AGTGAAAGCCCTCCACCCCCCAGCCTGTTTCCCGTGGTTTT-------GGGGGAGGAGCGATGAGAATGAGGCTAGAGAAGTAGATTGGGGTCAGCTAT-AAGGGCCTGCCTGCCCTGCTAAGGAGTTAGACCTACAGCCTGGCAGCAGGGTTTTAAGGGCTTTAAGCAACGG-AGAGGTGTGTTTT-AGGAAGGCCCAGTCAAGGCAGCGTGGAGGAATGGTGATTCCAGGACAGAGTTC-GTGAAGTGGCATGGTGTAGTGCA-----------ACTGGAgtgcactggaaacccctggaggacctgttaaaacacaggttg i dasNov3.JH562710 C 0 C 0 e cebCap1.NW_016107999v1 37613 1310 - 709587 M e canFam3.chr4 37156612 615 + 88276631 I e proCoq1.NW_012152163v1 709354 7401 - 940639 I a score=144839.000000 s hg38.chr5_KI270795v1_alt 25679 15 + 131892 ctagatcccactctg s panTro5.chr5 5274151 15 - 181907262 ctagatcccactctg i panTro5.chr5 C 0 C 0 s panPan2.chr5 5536613 15 - 183735486 ctagatcccactctg i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1668438 15 + 3967317 ctagatcccactctg i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4486393 15 + 163208435 ctagatcccactctg i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5719105 15 - 180051392 ctaggccccactctg i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5910895 15 - 181584905 ctaggccccactctg i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 939980 15 - 16193990 ctaggccccactctg i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1756976 15 - 21434487 ctagaccccactctg i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4725843 15 - 82825804 ctaggcctcactctg i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 221211 15 + 2521317 ctaggccccactctg i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1712232 15 - 2415367 ctaggccccactctg i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64054012 15 + 204313951 ctaggttccactctg i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2182759 15 + 10068113 ctaggtcccactctg i saiBol1.JH378186 C 0 C 0 s aotNan1.NW_018501968v1 1139154 15 - 2246441 ctaggtcccactctg i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1211569 15 + 48283576 ctaggtcttaccccc i otoGar3.GL873522 C 0 C 0 s mm10.chr13 65973674 14 - 120421639 TTAGGTCTGGCCCT- i mm10.chr13 C 0 C 0 e cebCap1.NW_016107999v1 37613 1310 - 709587 M e canFam3.chr4 37156612 615 + 88276631 I e proCoq1.NW_012152163v1 709354 7401 - 940639 I e dasNov3.JH562710 229153 0 - 960158 C a score=24412.000000 s hg38.chr5_KI270795v1_alt 25694 5 + 131892 agagt s panTro5.chr5 5274166 5 - 181907262 agagt i panTro5.chr5 C 0 C 0 s panPan2.chr5 5536628 5 - 183735486 agagt i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1668453 5 + 3967317 agagt i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4486408 5 + 163208435 agagt i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5719120 5 - 180051392 tgaga i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5910910 5 - 181584905 tgaga i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 939995 5 - 16193990 tgaga i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1756991 5 - 21434487 tgaga i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4725858 5 - 82825804 tgaga i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 221226 5 + 2521317 tgaga i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1712247 5 - 2415367 tgaga i colAng1.NW_012115755v1 C 0 C 0 s aotNan1.NW_018501968v1 1139169 5 - 2246441 tgagt i aotNan1.NW_018501968v1 C 0 I 93 s otoGar3.GL873522 1211584 5 + 48283576 agagg i otoGar3.GL873522 C 0 I 1 s mm10.chr13 65973688 5 - 120421639 CGAGT i mm10.chr13 C 0 C 0 e cebCap1.NW_016107999v1 37613 1310 - 709587 M e saiBol1.JH378186 2182774 0 + 10068113 C e calJac3.chr2 64054027 0 + 204313951 C e canFam3.chr4 37156612 615 + 88276631 I e proCoq1.NW_012152163v1 709354 7401 - 940639 I e dasNov3.JH562710 229153 0 - 960158 C a score=-5362.000000 s hg38.chr5_KI270795v1_alt 25699 10 + 131892 tttatt--------tttg s panTro5.chr5 5274171 10 - 181907262 tttagt--------tttg i panTro5.chr5 C 0 C 0 s panPan2.chr5 5536633 10 - 183735486 tttatt--------tttg i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1668458 18 + 3967317 tttatttttgtttgtttg i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4486413 18 + 163208435 tttatttttgtttgtttg i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5719125 10 - 180051392 gtttAG--------tttg i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5910915 10 - 181584905 gtttag--------tttg i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 940000 6 - 16193990 gttta------------g i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1756996 10 - 21434487 gtttAG--------tttg i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4725863 10 - 82825804 gtttag--------tttg i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 221231 10 + 2521317 gtttAG--------tttg i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1712252 1 - 2415367 -----------------g i colAng1.NW_012115755v1 C 0 C 0 s otoGar3.GL873522 1211590 10 + 48283576 tttagt--------tctg i otoGar3.GL873522 I 1 C 0 s mm10.chr13 65973693 9 - 120421639 TTTAGC--------TTT- i mm10.chr13 C 0 C 0 e cebCap1.NW_016107999v1 37613 1310 - 709587 M e saiBol1.JH378186 2182774 0 + 10068113 C e calJac3.chr2 64054027 0 + 204313951 C e canFam3.chr4 37156612 615 + 88276631 I e proCoq1.NW_012152163v1 709354 7401 - 940639 I e dasNov3.JH562710 229153 0 - 960158 C e aotNan1.NW_018501968v1 1139174 93 - 2246441 I a score=118095.000000 s hg38.chr5_KI270795v1_alt 25709 24 + 131892 tttgtttgt------tttttgagacagagt s panTro5.chr5 5274181 24 - 181907262 tttgtttgt------tttttgagacggagt i panTro5.chr5 C 0 C 0 s panPan2.chr5 5536643 24 - 183735486 tttgtttgt------tttttgagacggagt i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1668476 24 + 3967317 tttgtttgt------tttttgagacggagt i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4486431 24 + 163208435 tttgtttgt------tttttgagacagagt i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5719135 23 - 180051392 tttg-ttgt------gttttgagatggagt i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5910925 23 - 181584905 tttg-ttgt------gttttgagatggagt i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 940006 23 - 16193990 tttg-ttgt------gttttgagatggagt i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1757006 24 - 21434487 tttgtttgt------attttgagatggagt i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4725873 24 - 82825804 tttgtttgt------attttgagatggagt i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 221241 24 + 2521317 tttgtttgt------attttgagatggagt i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1712253 24 - 2415367 tttgtttgt------tttttaagatggagt i colAng1.NW_012115755v1 C 0 C 0 s mm10.chr13 65973702 30 - 120421639 TCTGTTGGCTGCGCATTGCTGGAACAGAAT i mm10.chr13 C 0 I 301 e cebCap1.NW_016107999v1 37613 1310 - 709587 M e saiBol1.JH378186 2182774 0 + 10068113 C e calJac3.chr2 64054027 0 + 204313951 C e otoGar3.GL873522 1211600 0 + 48283576 C e canFam3.chr4 37156612 615 + 88276631 I e proCoq1.NW_012152163v1 709354 7401 - 940639 I e dasNov3.JH562710 229153 0 - 960158 C e aotNan1.NW_018501968v1 1139174 93 - 2246441 I a score=368386.000000 s hg38.chr5_KI270795v1_alt 25733 65 + 131892 cttgctcttgttgcttaggcaggagtgcaatcgtgcgatctcggttcactgcaacctcagccttc s panTro5.chr5 5274205 65 - 181907262 cttgctctcgttgcttaggcaggagtgcaatggtgcgatctcggttcactgcaacctcagccttc i panTro5.chr5 C 0 C 0 s panPan2.chr5 5536667 65 - 183735486 cttgctctcgttgcttaggcaggagtgcaatggtgcgatctcggttcactgcaacctcagccttc i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1668500 65 + 3967317 cttgctctcgttgcttaggcaggagtgcaatggtgcgatctcggttcactgcaacctcagccttc i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4486455 65 + 163208435 cttgctctcgttgcttaggcaggagtgcaatggtgcgatcttggttcactgcaacctcagccttc i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5719158 65 - 180051392 cttgctcttgttgcccaggcaggagtgcaatgatgccatcttggctcactgcaacctcagccttc i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5910948 65 - 181584905 cttgctcttgttgcccaggcaggagtgcaaggatgccatcttggctcactgcaacctcagccttc i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 940029 65 - 16193990 cttgctcttgttgcccaggcaggagtgcaatgatgccatcttggctcactgcaacctcagccttc i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1757030 65 - 21434487 cttgctcttgttgcccaggcaggagtgcaatggtgccatcttggctcactgcaacctcagccttc i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4725897 65 - 82825804 cttgctgttgttgcccaggcaggagtgcaatggtgccatctcggctcactgcaacctcagccttc i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 221265 65 + 2521317 cttgctcttgttgccgaggcaggagtgtaatggtgccatcttggctcactgcaacctcagccttc i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1712277 65 - 2415367 cttgctcttgttgcccaggcaggagtgcaatggtgccatctcggctcactgcaacctcagccttc i colAng1.NW_012115755v1 C 0 C 0 e cebCap1.NW_016107999v1 37613 1310 - 709587 M e saiBol1.JH378186 2182774 0 + 10068113 C e mm10.chr13 65973732 301 - 120421639 I e calJac3.chr2 64054027 0 + 204313951 C e otoGar3.GL873522 1211600 0 + 48283576 C e canFam3.chr4 37156612 615 + 88276631 I e proCoq1.NW_012152163v1 709354 7401 - 940639 I e dasNov3.JH562710 229153 0 - 960158 C e aotNan1.NW_018501968v1 1139174 93 - 2246441 I a score=539896.000000 s hg38.chr5_KI270795v1_alt 25798 105 + 131892 ctgggttcaagcaattctcctgcttcagcctccccagtagctgggattacaggtgcctgccaccatgtccggctaatttttattt----------------tttctttttgtatttttagt s panTro5.chr5 5274270 105 - 181907262 ctgggttcaagcaattctcctgcttcagcctccccagtagctgggattacaggtgcctgccaccatgtccggctaatttttattt----------------tttctttttgtatttttagt i panTro5.chr5 C 0 C 0 s panPan2.chr5 5536732 105 - 183735486 ctgggttcaagcaattctcctgcttcagcctccccagtagctgggattacaggtgcctgccaccatgtccggctaatttttattt----------------tttctttttgtatttttagt i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1668565 103 + 3967317 ctgggttcaagcaattctcctgcttcagcctccccagtagctgggattacaggtgcctgccaccatgtccggctaatttt--ttt----------------tttctttttgtatttttagt i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4486520 102 + 163208435 ctgggttcaagcaattcttctgcttcagcctcctcagtagctgggattacaggtgcctgccaccatgtccggctaattt---ttt----------------tttctttttgtatttttagt i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5719223 119 - 180051392 ctgggttcaagcagttctcctacttcagcctccccagtagctgggattacaggtgcctgccaccatgtctggctaattttttttctttttttttttttc--tttttttttgtatttttagt i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5911013 121 - 181584905 ctgggttcaagcagttctcctgcttcagcctccccagtagctgggattacaggtgcctgccaccatgtctggctaatttttttttcttttttttttttctttttttttttgtatttttagt i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 940094 119 - 16193990 ctgggttcaagcagttctcctgcttcagcctccccagtagctgggattacaggtgcctgccaccatgtctggctaattttttttctttttttttttttc--tttttttttgtatttttagt i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1757095 114 - 21434487 ctgggttcaagcagttctcctgcttcagcctccccagtagctgggattacaggtgcctgccaccatgtctggctaatttttttttctttttttt-------tttttttttgtatttttagt i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4725962 118 - 82825804 ctgggttcaagcagttctcctgcttcagcctccccagtagctgggattacaggtgcctgccaccatgtctggctaatttttttttctttttctttttc---tttttttttgtatttttagt i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 221330 101 + 2521317 ctgggttcaagcagttctcctgcttcagccgccccagtagctgggattacaggtgcctgccaccatgtctggctaattttt--------------------ttttttttcgtatttttagt i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1712342 119 - 2415367 ctgggttcaagcagttctcctgcttcagcctccccagtagctgggattacaggtgcctgccagcatgttcagctaattttttttcttttcttttttttt--ttttttattgtatttttagt i colAng1.NW_012115755v1 C 0 C 0 s dasNov3.JH562710 229153 15 - 960158 ctaggt----------------------cctacccAT------------------------------------------------------------------------------------ i dasNov3.JH562710 C 0 C 0 e cebCap1.NW_016107999v1 37613 1310 - 709587 M e saiBol1.JH378186 2182774 0 + 10068113 C e mm10.chr13 65973732 301 - 120421639 I e calJac3.chr2 64054027 0 + 204313951 C e otoGar3.GL873522 1211600 0 + 48283576 C e canFam3.chr4 37156612 615 + 88276631 I e proCoq1.NW_012152163v1 709354 7401 - 940639 I e aotNan1.NW_018501968v1 1139174 93 - 2246441 I a score=532351.000000 s hg38.chr5_KI270795v1_alt 25903 106 + 131892 agagatggggtttcaccatgttggccaggctggtctcatactcctggcctcgtgatctgcccacctcggcctcccaaagtgctgggattacaggtgtgagcccagc s panTro5.chr5 5274375 106 - 181907262 agagatggggtttcaccatgttggccaggctggtctcatactcctggcctcgtgatctgcccaccttggcctcccaaagtgctgggattacaggtgtgagcccagc i panTro5.chr5 C 0 C 0 s panPan2.chr5 5536837 106 - 183735486 agagatggggtttcaccatgttggccaggctggtctcatactcctggcctcgtgatctgcccaccttggcctcccaaagtgctgggattacaggtgtgagcccagc i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1668668 106 + 3967317 agagatggggtttcaccatgttggccaggctggtctcatactcctgacctcgtgatccgcccacctcggcctcccaaagtgctgggattacagctgtgagcccagc i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4486622 84 + 163208435 agagatggggtttcaccatgttggccaggctggtctcatactcct----------------------ggcctcccaaagtgctgggattacaggcgtgagcccagc i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5719342 106 - 180051392 agagatggggtttcactatgttggccaggctggtctcaaactcctgacctcatgatccgcccacctcggcctcccaaagtgctgggattacaggtgtgagccCAGc i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5911134 106 - 181584905 agagatggggtttcactatgttggccaggctggtctcaaactcctgacctcatgatccgcccacctcggcctcccaaagtgctgggattacaggtgtgagcccagc i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 940213 94 - 16193990 agagatggggtttcaccg------------tggtctcaaactcctgacctcatgatccgcccacctcggcctcccaaagtgctgggattacaggtgtgagcccagc i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1757209 106 - 21434487 agagatggggtttcactatgttggccaggctggtctcaaactcctgacctcatgatccgcccacctcggcctcccaaagtgctgggattacaggtgtgagccCAGc i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4726080 106 - 82825804 agagatggggtttcactatgttggccaggctggtctcaaactcctgacctcatgatccgcccacctcggcctcccaaagtgctgggattacaggtgtgagcccagc i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 221431 106 + 2521317 agagatggggtttcactatgttggccaggctggtctcaaactcctgacctcatgatccgcccacctcggcctcccaaagtgctgggattacaggtgtgagccCAGc i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1712461 106 - 2415367 agagatggggtttcactatgttggccaggctggtctcaaactcctgacctcatgatccgctcgcctcggcctcccaaagtgctgggattacaggtgtgagcccagc i colAng1.NW_012115755v1 C 0 C 0 s otoGar3.GL873522 1211600 11 + 48283576 agagaaggatc----------------------------------------------------------------------------------------------- i otoGar3.GL873522 C 0 C 0 s dasNov3.JH562710 229168 30 - 960158 ---GATGGGGT---------------------------------------------------------------AGAAGCCCTGGAG----------AATCCCAGC i dasNov3.JH562710 C 0 C 0 e cebCap1.NW_016107999v1 37613 1310 - 709587 M e saiBol1.JH378186 2182774 0 + 10068113 C e mm10.chr13 65973732 301 - 120421639 I e calJac3.chr2 64054027 0 + 204313951 C e canFam3.chr4 37156612 615 + 88276631 I e proCoq1.NW_012152163v1 709354 7401 - 940639 I e aotNan1.NW_018501968v1 1139174 93 - 2246441 I a score=540834.000000 s hg38.chr5_KI270795v1_alt 26009 70 + 131892 tgagagtttgattttctaac--attctcaggggtcgctgttgct-------gctgCCGCTAATGTTGGTAAAGTGGTTA s panTro5.chr5 5274481 70 - 181907262 cgagagtttgattttctaac--attctcaggggtcgctgttgct-------gctgCCGCTGATGTTGGTAAAGTGGTTA i panTro5.chr5 C 0 C 0 s panPan2.chr5 5536943 70 - 183735486 cgagagtttgattttctaac--attctcaggggtcgctgttgct-------gctgCCGCTGATGTTGGTAAAGTGGTTA i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1668774 70 + 3967317 cgagagtttgattttctaac--attctcaggggtcgctgttgct-------gctgCCGCTAATGTTGGTAAAGTGGTTA i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4486706 72 + 163208435 tgagagtttgattttctaacagattctcaggggtcgctgtcgct-------gctgCCGCTAATGTtggtaaagtggtta i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5719448 72 - 180051392 cgagagtctgattttctaacagattctcaggcgtcgctgttgct-------gctgCTGCTAATGTTTGTAAAgtggtta i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5911240 72 - 181584905 cgagagtctgattttctaacagattctcaggcgtcgctgttgct-------gctgCTACTAATGTTTGTAAAgtggtta i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 940307 72 - 16193990 cgagagtctgattttctaacagattctcaggcgtcactgttgct-------gctgCTGCTAATGTTTgtaaagtggtta i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1757315 72 - 21434487 tgagagtctgattttctaacagattctcaggcgtcgctgttgct-------gctgCTGCTAATGTTTGTAAAGTGGTTA i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4726186 72 - 82825804 cgagagtttgattttctaacagattctgaggggtcgctgttgct-------gctgCTGCTAATGTTTGTAAAgtggtta i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 221537 72 + 2521317 cgagagtctgattttctaacagattctcaggcgtcgctgttgct-------gctgCTGCTAATGTTTGTAAAGTGGTTA i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1712567 72 - 2415367 cgagagtttgattttctaatagattctcaggggtcactgttgct-------gctgCTGCTAATGTTTGTAAAGTGGTTA i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64054027 72 + 204313951 tgagtgtctgattTTCTAACAAATTCTCGGGGGTCGCTGTTGCT-------GCTGCCACTAATGTCCACAAAGCGGTAA i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2182774 72 + 10068113 tgagtgtctgattTTCTAACAAATTCTCGGGGGTCGCTGTTGCT-------GCTGCCACCAATGTCCACGAAGCAGTAA i saiBol1.JH378186 C 0 C 0 s otoGar3.GL873522 1211611 73 + 48283576 tgaaagtctgattttctaacagattcccgggggtgggggtgggggtggggAGCTGCTGCTA------GTAAAGTGGTTA i otoGar3.GL873522 C 0 C 0 s dasNov3.JH562710 229198 29 - 960158 --------------------GGATTCTCA-----------TGCT-------GCTG------------GTGACAtggtta i dasNov3.JH562710 C 0 C 0 e cebCap1.NW_016107999v1 37613 1310 - 709587 M e mm10.chr13 65973732 301 - 120421639 I e canFam3.chr4 37156612 615 + 88276631 I e proCoq1.NW_012152163v1 709354 7401 - 940639 I e aotNan1.NW_018501968v1 1139174 93 - 2246441 I a score=198461.000000 s hg38.chr5_KI270795v1_alt 26079 39 + 131892 GTCAGATAGATACAGGGCCCTTGCCCAGGGTTTAAACCC s panTro5.chr5 5274551 39 - 181907262 GTCAGATAGATACAGGGCCCTTGCCCAGGGTTTAAACCC i panTro5.chr5 C 0 C 0 s panPan2.chr5 5537013 39 - 183735486 GTCAGATAGATACAGGGCCCTTGCCCAGGGTTTAAACCC i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1668844 39 + 3967317 GTCAGATAGATACAGGGTCCTTGCCCAGGGTTTAAACCC i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4486778 39 + 163208435 gtcagatagatacagggcccttgcccggggtttaaaccc i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5719520 32 - 180051392 gtcagatagatacagggccctcgcccggggtg------- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5911312 32 - 181584905 gtcagatagatacagggccctcgcccggggtg------- i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 940379 32 - 16193990 gtcagatagatacagggccctcgcccagggta------- i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1757387 32 - 21434487 GTCAGATAGATACAGGGCCCTCGCCCGGGGTG------- i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4726258 32 - 82825804 gtcagatagatacagggcccttgcccggggtg------- i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 221609 32 + 2521317 GTCAGATAGATACAGGGCCCTCGCCCGGGGTG------- i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1712639 32 - 2415367 GTCAGATAGATATAGGGCCCTCGCCCGGGGTG------- i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64054099 28 + 204313951 GTC----AGATCCAGGGGCCTCGCCCAGGGTG------- i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2182846 28 + 10068113 GTC----AGACCCAGGGGCCTCACCCAGGGTG------- i saiBol1.JH378186 C 0 C 0 s otoGar3.GL873522 1211684 27 + 48283576 TTT----AGATATGTGGGCCTTGCCCAGGGT-------- i otoGar3.GL873522 C 0 I 1 s mm10.chr13 65974033 39 - 120421639 gtcaaggagacactGCTGCTTTGTACAAGGACACAGCTC i mm10.chr13 I 301 C 0 s dasNov3.JH562710 229227 24 - 960158 --------gggacctgggcctggccagagtgc------- i dasNov3.JH562710 C 0 C 0 e cebCap1.NW_016107999v1 37613 1310 - 709587 M e canFam3.chr4 37156612 615 + 88276631 I e proCoq1.NW_012152163v1 709354 7401 - 940639 I e aotNan1.NW_018501968v1 1139174 93 - 2246441 I a score=206938.000000 s hg38.chr5_KI270795v1_alt 26118 21 + 131892 TTGctgg------gtttcaactttaga s panTro5.chr5 5274590 21 - 181907262 TTGctgg------gtttaaactttaga i panTro5.chr5 C 0 C 0 s panPan2.chr5 5537052 21 - 183735486 TTGctgg------gtttaaactttaga i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1668883 21 + 3967317 TTGctgg------gtttaaactttaga i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4486817 21 + 163208435 ttactgg------gtttaaactttaga i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5719552 21 - 180051392 ctgctgg------gtttaaactttaaa i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5911344 21 - 181584905 ctgctgg------gtttaaactttaga i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 940411 21 - 16193990 ctgctgg------gtttaaactttaga i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1757419 21 - 21434487 CTGctgg------gtttaaacttaaga i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4726290 21 - 82825804 ctgctgg------gtttaaactttaga i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 221641 21 + 2521317 CTGctgg------gtttaaactttaga i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1712671 21 - 2415367 CTGctgg------gtttaaactttaga i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64054127 21 + 204313951 TTGctgg------atttaaactttaga i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2182874 21 + 10068113 TTGctgg------atttaaactttaga i saiBol1.JH378186 C 0 C 0 s aotNan1.NW_018501968v1 1139267 21 - 2246441 ttgctgg------atttaaactttaga i aotNan1.NW_018501968v1 I 93 C 0 s otoGar3.GL873522 1211712 19 + 48283576 CTGCTGG-------TTTAAACTTTGA- i otoGar3.GL873522 I 1 C 0 s mm10.chr13 65974072 27 - 120421639 CGGCTTGTAAACGGATTAAACTACAGA i mm10.chr13 C 0 C 0 s dasNov3.JH562710 229251 20 - 960158 -tgccac------atttacaatttagc i dasNov3.JH562710 C 0 C 0 e cebCap1.NW_016107999v1 37613 1310 - 709587 M e canFam3.chr4 37156612 615 + 88276631 I e proCoq1.NW_012152163v1 709354 7401 - 940639 I a score=190825.000000 s hg38.chr5_KI270795v1_alt 26139 19 + 131892 tcttctactt--------------gtagctagc s panTro5.chr5 5274611 19 - 181907262 tcttctactt--------------gtagctagc i panTro5.chr5 C 0 C 0 s panPan2.chr5 5537073 19 - 183735486 tcttctactt--------------gtagctagc i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1668904 19 + 3967317 tcttctactt--------------gtagctagc i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4486838 19 + 163208435 tcttctactt--------------gtagctagc i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5719573 19 - 180051392 tcttctactt--------------gtagctagc i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5911365 19 - 181584905 tcttctactt--------------gtagctagc i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 940432 19 - 16193990 tcttctactt--------------gtagctagc i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1757440 19 - 21434487 gcttctactt--------------gtagctagc i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4726311 19 - 82825804 tcttctactt--------------gtagctagc i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 221662 19 + 2521317 tcttctactt--------------gtaggtagc i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1712692 19 - 2415367 tcttctactt--------------gtagctagc i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64054148 19 + 204313951 tattctactt--------------gtagccagc i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2182895 19 + 10068113 tattctgctt--------------gtagctagc i saiBol1.JH378186 C 0 C 0 s aotNan1.NW_018501968v1 1139288 19 - 2246441 tattctactt--------------gtagatagc i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1211731 16 + 48283576 ---TCGACGG--------------GTGGctaga i otoGar3.GL873522 C 0 C 0 s mm10.chr13 65974099 29 - 120421639 TCCTCCCCCCCCCCCCCCGCCCCAGtagc---- i mm10.chr13 C 0 C 0 s canFam3.chr4 37157227 19 + 88276631 ttttccactt--------------GTAGGtacc i canFam3.chr4 I 615 C 0 s dasNov3.JH562710 229271 19 - 960158 gcctccattt--------------gtacttagc i dasNov3.JH562710 C 0 C 0 e cebCap1.NW_016107999v1 37613 1310 - 709587 M e proCoq1.NW_012152163v1 709354 7401 - 940639 I a score=3801681.000000 s hg38.chr5_KI270795v1_alt 26158 328 + 131892 tatgtggccttggccaggtcctctaacctgtgtgagccttagt---ttcctcatctgt-aaattggaatgctacctacttcctagga-tgttgtaagaatcccatgatttaacgtgtataatcc-------ctcagcacagtgcct-gtggtcagcatt---taatagaggatcgttttattatt-TTATTAATACCAGTGAGGAGGCTGTTGCTGAAGTCCAAGGGAGAGAT-GAAAGAGAGGCTGAACGAGGCTCGTGGCTGAGGGATGGA-----GGGCA-----TCT--GTTTTCTC--AGTGGCTCAAAG-CCT-ATGATCCT-CCCTCATAG--GAGAACACGTTGCTTCCTTCCACAG s panTro5.chr5 5274630 326 - 181907262 tatgtggccttggccaggtcctctaacctgtgtgagccttagt---ttcctcatctgt-aaattggaatgctacctacttcctagga-tgttgtaagaatcccatgatttaacgtgtataatcc-------ttcagcacagtgcct-gtggtcagcatt---taatagaggatcgttttattatt-TTATTAATaccagtgaggaggctgttgcagaagtccaagggagagat-gaa--agaggctgaacgaggctcgtggctgagggatggA-----GGGCA-----TCT--GTTTTCTC--AGTGGCTCAAAG-CCT-ATGGTCCT-CCCTCATAG--GAGAACACGTTGCTTCCTTCCACAG i panTro5.chr5 C 0 C 0 s panPan2.chr5 5537092 326 - 183735486 tatgtggccttggccaggtcctctaacctgtgtgagccttagt---ttcctcatctgt-aaattggaatgctacctacttcctagga-tgttgtaagaatcccatgatttaacgtgtataatcc-------ttcagcacagtgcct-gtggtcagcatt---taatagaggatcgttttattatt-TTATTAATaccagtgaggaggctgttgcagaagtccaagggagagat-gaa--agaggctgaacgaggctcgtggctgagggatggA-----GGGCA-----TCT--GTTTTCTC--AGTGGCTCAAAG-CCT-ATGGTCCT-CCCTCATAG--GAGAACACGTTGCTTCCTTCCACAG i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1668923 328 + 3967317 tatgtggccttggctaggtcctctaacctgtgtgagccttagt---ttcctcatctgt-aagttggaatgctacctacttcctagga-tgttgtaagaatcccatgatttaacgtgtataatcc-------ctcagcacagtgcct-gtggtcagcatt---taatagaggatcgttttattatt-TTATTAATACCAGTAAGGAGGCTGTTGCAGAAGTCCAAGGGAGAGAC-GAAAGAGAGGCTGAACGAGGCTCGTGGCTGAGGGATGGA-----GGGCA-----TCT--GTTTCCTC--AGTGGCTCAAAG-CCT-ATGATCCT-CCCTCATAG--GAGAACACGTTGCTTCCTTCCACAG i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4486857 324 + 163208435 tatgtggccttggccaggtcctctaacctgtgtgagccttagt---ttcctcatctgt-aaattggaatgctacctacttcctagga-tgttgtaggaatcccatgatttaacgtgtgtaatcc-------ctcagcacagtgcct-gtggtcagcatt---taatagaggatcgttttattatt-TTATTAATaccagtgaggaggctgttgcagaagtccaagggagagat-gagagagaggctgaacgaggctcgtggctgagggatggA-----GGGCA-----TCT--GTTTTCTC--AGTGGCTCAAAG-CCT-ATGAT-----CCTCATAG--GAGAACACGTTGCTTGCTTCCATAG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5719592 330 - 180051392 tatgtggccttggcggggtcctctaccctgtgtgaaccttagt---ttccttatctgt-aaattggaatgctggctacttcctagga-tgttgtaagaatcccatgatttaacgtgtgtaatcc-------ctcagcacagtacct-gcagtcagcatt---taatagaggatcgttttattatt-TTATTAATACCAGTGAGGAGGCTGTTGCAGAAGTCCAACGGAGAGAT-GAAAGAGAGGCTGAACTAGGCCTGTGGCTGAGGGATGGA-----GGGCA-----TCT--GTTTTCTC--AGTGGTTCAAAG-CCT-GTGATCCT-CCCTCATTGGAGAGAACACGTTGCTTCCTTCCACAG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5911384 330 - 181584905 tatgtggccttggcggggtcctctaccctgtgtgaaccttagt---ttccttatctgt-aaattggaatgctggctacttcctagga-tgttgtaagaatcccatgatttaacgtgtgtaatcc-------ctcagcacagtgcct-gcagtcagcatt---taatagaggatcgttttattatt-TTATTAATACCAGTGAGGAGGCTGTTGCAGAAGTCCAACGGAGAGAT-GAAAGAGAGGCTGAACTAGGCCTGTGGCTGAGGGATGGA-----GGGCA-----TCT--GTTTTCTC--AGTGGTTCAAAG-CCT-GTGATCCT-CCCTCATTGGAGAGAACACGTTGCTTCCTTCCACAG i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 940451 330 - 16193990 tatgtggccttggcgggatcctctaccctgtgtgaaccttagt---ttccttatctgt-aaattggaatgctggctacttcctagga-tgttgtaagaatcccatgatttaacgtgtgtaatcc-------ctcagcacagtgcct-gcagtcagcatt---taatagaggatcgttttattatt-TTATTAATaccagtgaggaggctgttgcagaagcccaacggagagat-gaaagagaggctgaactaggcctgtggctgagggatggA-----GGGCA-----TCT--GTTTTCTC--AGTGGTTCAAAG-CCT-GTGATCCT-CCCTCATTGGAGAGAACACGTTGCTTCCTTCCACAG i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1757459 328 - 21434487 tatgtggccttggcggggtcctctaccctgtgtgaaccttagt---ttccttatctgt-aaattggaatgctggctacttcctagga-tgttgtaagaatcccatgatttaacgtgtgtaatcc-------ctcagcacagtgcct-gcggtcagcatt---taatagaggatcgttttattatt-TTATTAATaccagtgaggaggctgttgcagaagtccaagggagagat-gaa--agaggctgaactaggcctgtggctgagggatggA-----GGGCA-----TCT--GTTTTCTC--AGTGGCTCAAAG-CCT-ATGATCCT-CCCTCATTGGAGAGAACACGTTGCTTCCTTCCACAG i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4726330 330 - 82825804 tatgtggccttgaccgggtcctctaccctgtgtgaaccttagt---ttccttatctgt-aaattggaatgctggctacttcctagga-tgttgtaagaatcccatgatttaacgtgtgtaatcc-------gtctgcacagtgtct-gcggtcagcatt---taatagaggatcgttttgttatt-TTATTAATaccagtgaagaggctgttgcagaagtccaagggagagat-gaAAGAGAGGCTGAACTACGCCTGTGGCTGAGGGATGGA-----GGGCA-----TCT--GTTTTCTC--AGTGGTTCAAAG-CCT-GTGATCCT-CCCTCATTGGAGAGAACACGTTGCTTCCTTCCACAG i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 221681 328 + 2521317 tatgtggccttggcggggtcctctaccctgtgtgaaccttagt---ttccttatctgt-aaattggaatgctggctacttcctagga-tgttgtaagaatcccatgatttaacgtgtgtaatcc-------ctcagcacagtgcct-gcggtcagcatt---taatagaggatcgttttattatt-TTATTAATaccagtgaggaggctgttgcagaagtccaagggagagat-gaa--agaggctgaactaggcctgtggctgagggatggA-----GGGCA-----TCT--GTTTTCTC--AGTGGCTCAAAG-CCT-ATGATCCT-CCCTCATTGGAGAGAACACGTTGCTTCCTTCCACAG i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1712711 330 - 2415367 catgtggccttggccgggtcctctaccctgtgtgaaccttagt---ttccttatctgt-aaattggaatgctacctacttcctagga-tgttgtaagaatcccatgatttaacgtgtgtaatcc-------ctcagcacagtgcct-gcggtcagcatt---taatagaggatggttttattatt-TTATTAATAGCAGTGAGGAGGCTGTTGCAGAAGTCCAAGGGAGAGAT-GAAAGAGAGGCTGAACTAGGCCTGTGGCTGAGGGATGGA-----GGGCA-----TCT--GTTTTCTC--AGTGGCTCAAAG-CCT-GTGATCCT-CCCTCATTGGAGAGAACACGTTGCTTCCTTCCACAG i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64054167 320 + 204313951 tatgtggccttggccaggtcctctaacctgcgtgagcctcagt---tttctcatc--t-aaattggaatgctacgtgctt-ctagga----tgcaagaatcctatgatttaacgtgtgtaatcc-------ctcagcacagtgtct-gtggtcagcatt---taatagaggatccttttattatt-TTACTAATaccagtgaggagtctgttgcagaagtccaagggagagat-gaAAAAGAGGCTGAACTAGGCCCGAGGCTGAGGGATGGA-----GGGCA-----TCT--GTTTTCTC--AGTGGCTCAAAG-CCT-ATCATCCT-CCCAC--TG--AAGAACACATTGTTTCCTTTCACAG i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2182914 306 + 10068113 tctgtggccgtggccaggtcctctaacctgcgtaagcttcagt---ttccttatctgt-aaattgga-------------------a----tgcaagaatcctatgatttaacgtgtgcaatcc-------ctcagcacagtgtct-gcggtcagcatt---taatagaggatccttttattatt-TTATTAATACCAGTGAGGAGTCTGTGGCAGAAGTCCAAGGGAGAGAT-GAAAAAGAGGCTGAACTAGACCCGTGGCTGAGGGATGGA-----GGGCA-----TCT--GTTTTCTC--AGTGGCTCAAAG-CCT-GTGATCCT-CCCTCGGTG--GAGAACACGTTGCTTCCTTTCACAG i saiBol1.JH378186 C 0 C 0 s aotNan1.NW_018501968v1 1139307 324 - 2246441 tgtgtggccttggccaggtcctctaacctgcgtgagcctcagt---ttcctcatctgt-aaattgaaatgctacgtactt-ctagga----tgcaagaatcctatgatttaacgtgtgtaatcc-------ctcagcacagtgtct-gtggtcagcatt---taatagaggatccttttattatt-TTATTAATACCAGTGAGGAGTCTGTTGCAGAAGTCCAAGGGAGAGAT-GAAAAAGAGGCTGAACTAGGCCTGTGGCTGAGGGATGGA-----GGACA-----TCT--GTTTTCTC--AGTGGCTCAAAG-CCT-ATCATTCT-CCCTCACTG--GAGAACACGTTGCTTCCTTTCACAG i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 716755 335 - 940639 tatgtggcctttgccacgtcctctaacctgtgtgagcctcagt---atcctcatctgt-aaattgggatgctacccacttccgaagaatgttgtaagaattccatgagataacgtgtgtaatca-------ctgagca--gtgtct-gcagtcagcatt---cagtagaagatctttttattattCTTATTAATaccagtgaggaggctgttgcagaagtccaagggagagat-gaaaaagaggctgagctaggctagtgactgagggatgga-----gagaaggcagtct--ggtttctC--AGAGGCTCAAAGGCCT-GTGATCTTCCCCTCATTG--GAGAACACTTTGCCTCCTTCCAGTG i proCoq1.NW_012152163v1 I 7401 I 9 s otoGar3.GL873522 1211747 336 + 48283576 catgtggcctttgccagatcctctaacgcatgtgagtctcagt---ttcctcatctg--gaagtgggacactacctacttctgaacaacgttgtaagaattccatgagatattgtgtgtaatca-------gttagcaccgtgtct-gcagtcagcatt---cagtaagagattgtcttattattCTTATTAACaccagtgagaaggctgttgcagaagtccaagggagaaataaaaaaagaggctgaactaggctagtgactgagggatgga-----gagaaggcagtct--ggttctTC--AAAGGCTCAAAGCCCT-GCAATCTT-CCTTCATCA--GAGAACAATTTGCCTCCTTCCAGGG i otoGar3.GL873522 C 0 I 2 s mm10.chr13 65974128 291 - 120421639 cgtatggccttggcc----ttttaaacttttatgagcctcagt---ttcctctcctgt-agactaga-tactacctgattccaaagagagttgtaagaactc------------tgggtgacccgagactgctcggcacagttcct-gcgaacagcaTCCTGCAGTAGGAGGCTGT-TTGTGATC-TTATTGGTGCCACTAGGGAGACTGTAGCAG-AGTCCAGAGG-------GCA--AGGGACCCACCCAGGCTAGCGGCTGTAGGAGGGA-----AGGTA-----ACGGAGGTGGTTT--ACAGGTTCGAAG-CTTGGTGATCCT-CTCTCAGTG--G------------------------ i mm10.chr13 C 0 C 0 s canFam3.chr4 37157246 325 + 88276631 catggggcatttggtacatttcctcacccgtgtgagcctctgtgtgtttctcatctgt--agctgggataccgcccacttcaaggag-tggtataagaatta-atgaggtaacggaag--agct-------ctcagcacagtgcct-gcagtcagcattc--ccttggctgttcgttt--------ttattAAAACCAGTGAGGAGGTTGTCGCAGAGGTGCTAGCGAGAGGC-GAAGGAGAGGCTGAGCGAGGCCAGTGG-TGAGGGATGGAGAGTTGGGGA-----CCT--GGTTTCTCTGACAGGCTCCAAGCCCT-GTGATCCT-CCCCCTTGG--AGCCGGGTTTTACCTCTTTCCA--- i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 229290 307 - 960158 catatggctttgggcagttacttt---ctctctgagcctcagt---tt-ctcatctgtaaaacggggatactactcattacccaggg---atgtaagagttaagtgaggtaatgtgtgcaagca-------tttagcagagtgcgtggaagacagtgtt---cagtaggaggttgttttattatt-C--------CCAGTGAGGAGTCTGTTGCAAGAGTGCAAAGAAAAGTT-GAAGGAG-GACTGAACTAGGCTAGCGACCAAGGAATGGACAGGAGGGGA-----TCT--GGTTTCTT--AC--ACTCAAAGCCCT-GGGATCCT-CCCTCTTTG--GAGA---------CTCCTTTAA--- i dasNov3.JH562710 C 0 C 0 e cebCap1.NW_016107999v1 37613 1310 - 709587 M a score=69208.000000 s hg38.chr5_KI270795v1_alt 26486 9 + 131892 CGGGAACTT s panTro5.chr5 5274956 9 - 181907262 TGGGAACTT i panTro5.chr5 C 0 C 0 s panPan2.chr5 5537418 9 - 183735486 TGGGAACTT i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1669251 9 + 3967317 CGGGAACTT i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4487181 9 + 163208435 TGGGAACTT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5719922 9 - 180051392 CGGGAACTT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5911714 9 - 181584905 CGGGAACTT i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 940781 9 - 16193990 CGGGAACTT i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1757787 9 - 21434487 CGGGAACTT i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4726660 9 - 82825804 CGGCAACTT i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 222009 9 + 2521317 CGGGAACTT i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1713041 9 - 2415367 CGGGAACTT i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64054487 9 + 204313951 CGGGAACTT i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2183220 9 + 10068113 CGGGAACTG i saiBol1.JH378186 C 0 C 0 s aotNan1.NW_018501968v1 1139631 9 - 2246441 CGGGAACTT i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1212085 8 + 48283576 TGGAAAGT- i otoGar3.GL873522 I 2 C 0 s mm10.chr13 65974419 1 - 120421639 -------T- i mm10.chr13 C 0 C 0 s canFam3.chr4 37157571 6 + 88276631 ---GCACTG i canFam3.chr4 C 0 C 0 e cebCap1.NW_016107999v1 37613 1310 - 709587 M e proCoq1.NW_012152163v1 717090 9 - 940639 I e dasNov3.JH562710 229597 0 - 960158 C a score=2711366.000000 s hg38.chr5_KI270795v1_alt 26495 231 + 131892 GCTG--AAAACCTGTCGGCT-GGTGCCTGTGTGTCCTCTAGAGGGCAGTGGAGTCAAGGCTGAGGATGGAGCAT-TGTGTGC-CCTC--GGTTG--GGGCTGGTCTGT----GCGTTCAGCCTT-TATTCCCTGTTCTGAAACCCAATTGTGTATTTGCATTGGACTGTCCCCT-CCTCCTTGCTCTGTGTACTTGCTGACG-CTTTTTGGAAAACA-----CATCA-----CAGGGCACCTCTGATTTCCTGCTTG s panTro5.chr5 5274965 231 - 181907262 GCTG--AAAACCTGTCGGCT-GGTGCCTGTGTGTCCTCTAGAGGGCAGTGGAGTCAAGGCTGAGGATGGAGCAT-TGTGTGC-CCTC--GGTTG--GGGCTGGTCTGT----GTGTTCAGCCTT-TATTCCCTGTTCTGAAACCCAATTGTGTATTTGCATTGGACTGTCCCCT-CCTCCTTGCTCTGTGTACTTGCTGACG-CTTTTTGGAAAGCA-----CATCA-----CAGGGCACCTCTGATTTCCTGCTTG i panTro5.chr5 C 0 C 0 s panPan2.chr5 5537427 231 - 183735486 GCTG--AAAACCTGTCGGCT-GGTGCCTGTGTGTCCTCTAGAGGGCAGTGGAGTCAAGGCTGAGGATGGAGCAT-TGTGTGC-CCTC--GGTTG--GGGCTGGTCTGT----GCGTTCAGCCTT-TATTCCCTGTTCTGAAACCCAATTGTGTATTTGCATTGGACTGTCCCCT-CCTCCTTGCTCTGTGTACTTGCTGACG-CTTTTTGGAAAGCA-----CATCA-----CAGGGCACCTCTGATTTCCTGCTTG i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1669260 231 + 3967317 GCTG--AAAACCTGTCGGCT-GGTGCCTGTGTGTCCTCTAGAGGGCAGTGGAGTCAAGGCTGAGGATGGAGCAT-TGTGTGC-CCTC--GGTTG--GGGCTGGTCTGT----GCGTTCAGCCTT-TATTCCCTGTTCTGAAACCCAATTGTGTATTTGCATTGGACTGTCCCCT-CCTCCTTGCTCTGTGTACTTGCTGACG-CTTTTTGGAAAACA-----CATCA-----CAGGGCACCTCTGATTTCCTGCTTG i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4487190 231 + 163208435 GCTG--AAGACCTGTTGGCT-GGTGCCTGTGTGTCCTCTAGAGGGCAGTGGAGTCAAGGCTGCGGATGGAGCAT-CGTGTGC-CCTT--GATTG--GGGCTGGTCTGT----GCGTTCAGCCTT-TATTCCCTGTTCTGAAACCCAATTGTGTGTTTGCATTGGACTGTCCCCT-CCTCCTTGGTCTGTGTACTTGCTGATG-CTTTTTGGAAAACA-----CATCA-----CAGGGCACCTCTGATTTCCTGCTTG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5719931 234 - 180051392 GCTG--AAAACCTGCCTGCTGGGTGCCTGTGCAGCCTCTAGAGGGCAGTGGAGCCAAGGCTGCGGATGGAGCAT-TGTGTGC-CCTCTGGGTTG--GGGCTGGTCTGT----GCTTTCAGCCTT-TATTCCCTGTTCTGAAACCCAATTGTGTATTTGCATTGGACTGTCCCCT-CCTCCTTGCTCTGTGTACTTGCTGATG-CTTTTTGGAAAACA-----CATCA-----CAGGGCACCTCTGATTTCCTGCTCG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5911723 234 - 181584905 GCTG--AAAACCTGCCTGCTGGGTGCCTGTGCAGCCTCTAGAGGGCAGTGGAGCCAAGGCTGCGGATGGAGCAT-TGTGTGC-CCTCTGGGTTG--GGGCTGGTCTGT----GCTTTCAGCCTT-TATTCCCTGTTCTGAAACCCAATTGTGTATTTGCATTGGACTGTCCCCT-CCTCCTTGCTCTGTGTACTTGCTGATG-CTTTTTGGAAAACA-----CATCA-----CAGGGCACCTCTGATTTCCTGCTCG i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 940790 234 - 16193990 GCTG--AAAACCTGCCTGCTGGGTGCCTGTGCAGCCTCTAGAGGGCAGTGGAGCCAAGGTTGCGGATGGAGCAT-TGTGTGC-CCTCTGGGTTG--GGGCTGGTCTGT----GCTTTCAGCCTT-TATTCCCTGTTCTGAAACCCAATTGTGTATTTGCATTGGACTGTCCCCT-CCTCCTTGCTCTGTGTACTTGCTGATG-CTTTTTGGAAAACA-----CATCA-----CAGGGCACCTCTGATTTCCTGCTCG i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1757796 234 - 21434487 GCTG--AAAACCTGCCTGCTGGGTGCCTGTGCAGCCTCTAGAGGGCAATGGAGCCAAGGCTGCGGATGGAGCAT-TGTGTGC-CCTCTGGGTTG--GGGCTGGTCTGT----GCTTTCAGCCTT-TATTCCCTGTTCTGAAACCCAATTGTGTATTTGCATTGGACTGTCGCCT-CCTCCTTGCTCTGTGTACTTGCTGATG-CTTTTTGGAAAACA-----CATCA-----CAGGGCACCTCTGATTTCCTGCTGG i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4726669 234 - 82825804 GCTG--AAAACCTGCCTGCTGGGTGCCTGTGCAGCCTCTAGAGGGCAGTGGAGCCAAGGCTGTGGATGGAGCAT-TGTGTGC-CCTCTGGGTTG--GGGCTGATCTGT----GCTTTCAGCCTT-TATTCCCTGTTCTGAAACCCAATTGTGTATTTGCATTGGACTGTCCCCT-CCTCCTTGCTCTGTGTACTTGCTGATG-CTTTTTGGAAAACA-----CATCA-----CAGGGCACCTCTGATTTCTTGCTCG i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 222018 233 + 2521317 GCTG--AAAA-CTGCCTGCTGGGTGCCTGTGCAGCCTCTAGAGGGCAGTGGAGCCAAGGCTGCGGATGGAGCAT-TGTGTGC-CCTCTGGGTTG--GGGCTGGTCTGT----GCTTTCAGCCTT-TATTCCCTGTTCTGAAACCCAATTGTGTATTTGCATTGGACTGTCGCCT-CCTCCTTGCTCTGTGTACTTGCTGATG-CTTTTTGGAAAACA-----CATCA-----CAGGGCACCTCTGATTTCCTGCTCG i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1713050 234 - 2415367 GCTG--AAAACCTGCCTGCTGGGTGCCTGTGCAGCCTCTAGAGGGCAGTGGAGCCAAGGCTGCGGATGGAGCAT-TGTGTGC-CCTCTGGGTTG--GGGCTGGTCTGT----GCTTTCAGCCTT-TATTCCCTGTTCTGAAACCCAATTGTGTGTTTGCATTGGACTGTCCCCT-CCTCCTTGCTCTGTGTACTTGCTGATG-CTTTTTGGAAAACA-----CATCA-----CAGGGCACCTCTGATTTCCTGCTTG i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64054496 223 + 204313951 GCTG--AAAACCTGCCTGCT-GGTGCCTGTGTGGCCTCTAGAGGGCAGTGGAGCCAAGGCTGAGGATGGAGCAT-TGTGTGT-CCTCTGGGCTG--GGGCTGGTCTGT----GCATTCAGCCTT-CATTTCCTGTTCTGAAGCCTAATTGTGTATTTGCATTGGACTGTCCCCT-CCTCCTTGG----------CTCTGACG-CTTTTTGGAAAACA-----CATCA-----CAGGGCACCTCTGATTTCCTGCTTG i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2183229 223 + 10068113 GCTG--AAAACCTGCCTGCT-GGTGCCTGTGCGGCCTCTAGAGGGCAGTGGAGCCAAGGCTGTGGCTGGAGCAC-TGCGTGC-CCCCTGGGCTG--GGGCTGGTGTGT----GCGTTCAGCCTT-CATTCTCTGTTCTGAAGCCTAATTGTGTATTTGCCTTGGACTGTCCCCT-CCTGCTTGG----------CGCTGACG-CTCTTTGGAAAACA-----CATCA-----CAGGGCACCTCTGATTTCCTACTCG i saiBol1.JH378186 C 0 C 0 s aotNan1.NW_018501968v1 1139640 223 - 2246441 GCTG--AAAACCTGCCTGCT-GGTGCCTGTGTGGCCTCTAGAGGGCAGTGGAGCCAAGGCTGCAGATGGAGCAT-TGTGTGC-CCTCTGGGCTG--GGGCTGGTCTGT----GCATTCAGCCTT-CCTTCCCTGTTCTGAAGCCTAATTGTGTATTTGCATTGGACTGTCCCCT-CCTCCTTGG----------CTCTAATG-CTTTTTGGAAAACA-----CATCA-----CAGGGCATCTCTGATTTCCTGCTTG i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 717099 238 - 940639 GCTA--AAAACCTGCCTGCT-GGTCCCTGTGCAGCCAGTAGAGGGCAGTGGAGCCAAGGCTGTGGATGGAACATCTGTGTGC-CCTGCAGGTT---GGGCTGGTCTGT----GTGTTAGGCCTT-GATTTCCTGTTCTGAAGCCTATGCGTGTATTTGCATTGGACTGTCCCCTCCCTCCTTGCTCTGTGTACTTGC-GACA-TTTTTTGGAAAACA-----CTTCACCTCACCGGGCACCTTTGAGTTCCTGCTTG i proCoq1.NW_012152163v1 I 9 C 0 s otoGar3.GL873522 1212093 200 + 48283576 GCTA--AAAGCCTGCCTGCT-GGTCCCTGTACAGCCACTAGAGGGCAGTGGAGCCAAGGCTGCCGGTGGAATGT-TGTTTGCAACGACAGGTT---GGGCTGATCTGT----GTGTT----CTG-GATT------------------------------------CTGTCCCCTGCCTCCTTGCTCTGTGTACTTGCTGACATTTTTTTGGAAAACA-----CTTCACCGTTCAGGGCACCTTTGAGTCCCTGCTCA i otoGar3.GL873522 C 0 C 0 s mm10.chr13 65974420 226 - 120421639 GCTGTTAAGATCCGTGGACC-ATTCCCTGTGTGGCCACTAGAGGGAAGCAGAGGCAAGGCTGCGGTTGGAAACC-------C-GCTCCAGGATGCAGTGCGGCTGTCT----GCTTTCAGCCTTAAATTCCCTGTT---GAGCTGGACTGTGTCTCTGCCTTGAACAACCCCTC-TTTTCTTCCGCTGAACACATGCTGATG-GTTTTGAAAAATTA-----CT--------CGAGGTTCCTTCGTGCTCCTGCTTG i mm10.chr13 C 0 C 0 s canFam3.chr4 37157577 240 + 88276631 -GTT--CAAACCCGCGGGCG-TGTCCCTGTCTGGCCACTAGGGGGCAGAGGAGGCAAGACCGCCCAGAGGGAGG-TGGGCGT-CCAGAAGGCTG--GCGCTGGTGTGTGTGCGCGCGCAGCCTT-TATT-CGTGCTCTGAAGCCTAATTGTGTGTTTGCGTTGTGCTCTCCCCTCCCTCCTTGCTCTGTGTGTTTGCTGACG--TTTTTGGAAAGCACTTCGCATCA-----CAGGGCACCTCTGAGTTCCTGCTTG i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 229597 193 - 960158 --TT--AAAATCTGCCTTCT-GAT-CCCGTGTGGCCACTGGAGGGCAGTGGAGCCAAAGCTACAGGGGGAAGGC-----TGC-C-----------------------T--------------TT-TCCCCCGTGTTCTGAAGCCTGACTGC-------CCTTGGATTGCCCCGTCCCTCCTTGCTCTGTGTACTTGCTGGTG--TTTTTGGAAAACA-----CTTCGCATGGCAGGGCACCACTGAGTTCCTGCTGG i dasNov3.JH562710 C 0 C 0 e cebCap1.NW_016107999v1 37613 1310 - 709587 M a score=6528621.000000 s hg38.chr5_KI270795v1_alt 26726 453 + 131892 TCTTGTAGCCTGGGATTAGCAGTAGCTGAAGCGTGCTGCTTTCTGGCAGTTGTGTTTATTTCTCAAGGGCACAGGCTG-TACAGATCATGGGGGCCTGCTCCCT-------GCAGCTCAGCTGAGCCTAGGATGAACCACAGTTGCTCTTATGCCAGTTAAAAACTTGGGGCCTGTTCCATCTTGCATTTCCTCCCCCGCTTCCCAGTCCTCGCCCGCACCCTTTGATCCTGTGAGTGGAGAAAT---------GAAGAGAACTCCAAATCCTTAATCCATTTTGAAGGCCGGCTGGCAGCAGGGCTTTCTGTG-------GGCCTGGTAAGCAGCCCTAGTTGAATCATTTTAGAGAAGGGCAGG----TATTCTTTCAAGGTTATAGaaagaaaga--aa---aaaaaaaaaaaCC----AGAAGCACATTTATAATATTGGACAGTATACCTTGTCCCAAGCCCTGTACAT-----------TTGCTTTATTCCATAA s panTro5.chr5 5275196 453 - 181907262 TCTTGTAGCCTGGGATTAGCAGTAGCTGAAGCGTGCTGCTTTCTGGCAGTTGTGTTTATTTCTCAAGGGCACAGGCTG-TACAGATCATGGGGGCCTGCTCCCT-------GCAGCTCAGCTGAGCCTAGGATGAACCACAGTTGCTCTTATGCCAGTTAAAAACTTGGGGCCTGTTCCATCTTGCATTTCCTCCCCCGCTTCCCAGTCCTCGCCCGCACCCTTTGATCCTGTGAGTGGAGAAAT---------GAAGAGAACTCCAAATCCTTAATCCATTTTGAAGGCCGGCTGGCAGCAGGGCTTTCTATG-------GGCCTGGTAAGCAGCCCTAGTTGAATCATTTTAGAGAAGGGCAGG----TATTCTTTCAAGGTTATagaaagaaaga--aa---aaaaaaacaaaCC----AGAAGCACATTTATAATATTGGACAGTATACCTTGTCCCAAGCCCTGTACAT-----------TTGCTTTATTCCATAA i panTro5.chr5 C 0 C 0 s panPan2.chr5 5537658 453 - 183735486 TCTTGTAGCCTGGGATTAGCAGTAGCTGAAGCGTGCTGCTTTCTGGCAGTTGTGTTTATTTCTCAAGGGCACAGGCTG-TACAGATCATGGGGGCCTGCTCCCT-------GCAGCTCAGCTGAGCCTAGGATGAACCACAGTTGCTCTTATGCCAGTTAAAAACTTGGGGCCTGTTCCATCTTGCATTTCCTCCCCCGCTTCCCAGTCCTCGCCCGCACCCTTTGATCCTGTGAGTGGAGAAAT---------GAAGAGAACTCCAAATCCTTAATCCATTTTGAAGGCCGGCTGGCAGCAGGGCTTTCTATG-------GGCCTGGTAAGCAGCCCTAGTTGAATCATTTTAGAGAAGGGCAGG----TATTCTTTCAAGGTTATagaaagaaaga--aa---aaaaaaacaaaCC----AGAAGCACATTTATAATATTGGACAGTATACCTTGTCCCAAGCCCTGTACAT-----------TTGCTTTATTCCATAA i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1669491 450 + 3967317 TCTTGTAGCCTGGGATTAGCAGTAGCTGAAGCGTGCTGCTTTCTGGCAGTTGTGTTTATTTCTCAAGGGCACAGGCTG-TACAGATCATGGGGGCCTGCTCCCT-------GCAGCTCAGCTGAGCCTAGGATGAACCACAGTTGCTCTTATGCCAGTTAAAAACTTGGGGCCTGTTCCATCTTGCATTTCCTCCCCCGCTTCCCAGTCCTCGCCCGCACCCTTTGATCCTGTGAGTGGAGAAAT---------GAAGAGAACTCCAAATCCTTAATCCATTTTGAAGGCCGGCTGGCAGCAGGGCTTTCTATG-------GGCCTGGTAAGCAGCCCTAGTTGAATCATTTTAGAGAAGGGCAGG----TATTCTTTCAAGGTTATAGAAAGA---A--AA---AAAAAAACAAACC----AGAAGCACATTTATAATATTGGACAGTATACCTTGTCCCAAGCCCTGCACAT-----------TTACTTTATTCCATAA i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4487421 447 + 163208435 TCTTGTAGCCTGGGATTAGCAGTAGCTGAAGCGTGCTGCTTTCTGGCAGTTGTGTTTATTTCTCAAGGGCACAGGCTG-TACAGATCATGGGGGCCTGCTCCCT-------GCAGCTCAGCTGAGCCTAGGATGAACCACAGTTGCTCTTATGCCAGTTAAAAACTTGGGGCCTGTTCCATCTTGCA-TTCCTCCCCCGCTTCCCAGTCCTCGCCCGCACCCTTTGATCCTGTGAGTGGAGAAAT---------GAAGAGAACTCCAAATCCTTAATCCATTTTGAAGGCTGGCTGGTAGCAGGGCTTTCTGTG-------GGCCTGGTAAGCAGCCCTGGTTGAATCATTTTAGAGAAGGGCAGG----TATTCTTTCAAGGTTATAGGAAGA-------A---AAAAAAAACAACC----AGAAGCACATTTATAATATTGGACAGTATACCTTGTCCCAAGCCCTGTACAT-----------TTACTTTATTCCATAA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5720165 461 - 180051392 TCTTGTAGCCTAGGATTAGCAGTAGCTGAAGCGTGCTGCTTTCTGGCAGTTGTGTTTATTTCTCAAGGGCACAGGCGG-TACAGATCATGGGGGCCTGCTCCCTGCTCCCAGCAGCTCAGCTGAGCCTAGGATGAACCACAGTTGCTCTTACGCCAGTTCAAAACTTGGGGCCTGTTCCATCTTGCA-TTCCTCCCCCACTTCCCAGTCCTCACCCATACCCTTTGATCCTGTGAGTGGAGAAAT---------GAAGAGAACTCCAAATCCTTAATCCATTTTGAAGGCTGGCTGGAAGCAGGGCTTTCTATG-------GGCCTGGTAAGCAGCCCTGGTTGAATCATTTTAGAGAAGGGCAGG----TGTTCTTTCAAGGTTATAGaaagaaaggaaaa---aaaaaaaaaaaaC----AGAAGCACATTTATAATATTGGACAGTGTACCTTGTCTCAAGCCCTGTACAT-----------TTACTTTATTCCATAA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5911957 461 - 181584905 TCTTGTAGCCTAGGATTAGCAGTAGCTGAAGCGTGCTGCTTTCTGGCAGTTGTGTTTATTTCTCAAGGGCACAGGCGG-TACAGATCATGGGGGCCTGCTCCCTGCTCCCAGCAGCTCAGCTGAGCCTAGGATGAACCACAGTTGCTCTTACGCCAGTTCAAAACTTGGGGCCTGTTCCATCTTGCA-TTCCTCCCCCACTTCCCAGTCCTCACCCATACCCTTTGATCCTGTGAGTGGAGAAAT---------GAAGAGAACTCCAAATCCTTAATCCATTTTGAAGGCTGGCTGGAAGCAGTGCTTTCTATG-------GGCCTGGTAAGCAGCCCTGGTTGAATCATTTTAGAGAAGGGCAGG----TGTTCTTTCAAGGTTATAGaaagaaaggaaaa---aaaaaaaaaaaaC----AGAAGCACATTTATAATATTGGACAGTGTACCTTGTCTCAAGCCCTGTACAT-----------TTACTTTATTCCATAA i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 941024 459 - 16193990 TCTTGTAGCCTAGGATTAGCAGTAGCTGAAGCGTGCTGCTTTCTGGCAGTTGTGTTTATTTCTCAAGGGCACAGGCGG-TACAGATCATGGGGGCCTGCTCCCTGCTCCCAGCAGCTCAGCTGAGCCTAGGATGAACCACAGTTGCTCTTACGCCAGTTCAAAACTTGGGGCCTGTTCCATCTTGCA-TTCCTCCCCCACTTCCTAGTCCTCACCCATACCCTTTGATCCTGTGAGTGGAGAAAT---------GAAGAGAACTCCAAATCCTTAATCCATTTTGAAGGCTGGCTGGAAGCAGGGCTTTCTATG-------GGCCTGGTAAGCAGCCCTGGTTGAATCATTTTAGAGAAGGGCAGG----TGTTCTTTCAAGGTTATAGaaagaaagg--aa---aaaaaaaaaaaac----agaagCACATTTATAATATTGGACAGTGTACCTTGTCTCAAGCCCTGTACAT-----------TTACTTTATTCCATAA i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1758030 455 - 21434487 TTTTGTAGCCTAGGATTAGCAGTAGCTGAAGCGTGCTGCTTTCTGGCAGTTGTGTTTATTTCTCAAGGGCACAGGCGG-TACAGATCATGGGGGCCTGCTCCCTGCTCCCAGCAGCTCAGCTGAGCCTAGGATGAACCACAGTTGCTCTTATGCCAGTTCAAAACTTGGGGCCTGTTCCATCTTGCA-TTCCTCCCCCACTTCCCAGTCCTCACCCATACCCTTTGATCCTGTGAGTGGAGAAAT---------GAAGAGAACTCCAAATCCTTAATCCATTTTGAAGGCTGGCTGGAAGCAGGGCTTTCTATG-------GGCCTGGTAAGCAGCGCTGGTTGAATCATTTTAGAGAAGGGCAGG----TGTTCTTTCAAGGTTATagaaagaaaga---------aagaaaaaaaC----AGAAGCACATTTATAATATTGAACAGTGTACCTTGTCCCAAGCCGTGTACAT-----------TTACTTTATTCCATAA i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4726903 459 - 82825804 TCTTGTAGCCTAGGATTAGCAGTAGCTGAAGCGTGCTGCTTTCTGGCAGTTGTGTTTATTTCTCAAGGGCACAGGCGG-TACAGATCATGGGGGCCTGCTCCCTGCTCCCGGCAGCTCGGCTGAGCCTAGAATGAACCACAGTTGCTCTTACGCCAGTTCAAAACTTGGGGCCTGTTCCATCTTGCA-TTCCTCCCCCACTTCCCAGTCCTCACCCATACCCTTTGATCCTGTGAGTGGAGAAAT---------GAAGAGAACTCCAAATCCTTAATCCATTTTGAAGGCTGGCTGGAAGCAGGGCTTTCTATG-------GGCCTGGTAAGCAGCCCTGGTTGAATCATTTTAGAGAAGGGCAGG----TGTTCTTTCAAGGTTATAGAAAGAAAGA--AA---AACAAAAAAAACC----AGAAGCACATTTATAATATTGGACAGTGTACCTTGTCCCAAGCCCTGTACAT-----------TTACTTTATTCCATAA i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 222251 454 + 2521317 TCTTGTAGCCTAGGATTAGCAGTAGCTGAAGTGTGCTGCTTTCTGGCAGTTGTGTTTATTTCTCAAGGGCACAGGCGG-TACAGATCATGGGGGCCTGCTCCCTGCTCCCAGCAGCTCAGCTGAGCCTAGGATGAACCACAGTTGCTCTTATGCCAGTTCAAAACTTGGGGCCTGTTCCATCTTGCA-TTCCTCCCCGACTTCCCAGTCCTCACCCATACCCTTTGATCCTGTGAGTGGAGAAAT----------AAGAGAACTCCAAATCCTTAATCCATTTTGAAGGCTGGCTGGAAGCAGGGCTTTCTATG-------GGCCTGGTAAGCAGCGCTGGTTGAATCATTTTAGAGAAGGGCAGG----TGTTCTTTCAAGGTTATagaaagaaaga--a-------agaaaaaaaC----AGAAGCACATTTATAATATTGAACAGTGTACCTTGTCCCAAGCCGTGTACAT-----------TTACTTTATTCCATAA i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1713284 460 - 2415367 TCTTGTAGCCTAGGATTAGCCGTAGCTGAAGCGTGCTGCTTTCTGGCAGTTGTGTTTATTTCTCAAGGGCACAGGCGG-TACAGATCATGGGGGCCTGCTCCCTGCTCCCTGCAGCTCAGCTGAGCCTAGGATGAACCACAGTTGCTCTTATGCCAGTTCAAAACTTGGGGCCTGTTCCATCTTGCA-TTCCTCCCCCACTTCCCAGTCCTCACCCATACCCTTTGATCCTGTGAGTGGAGAAAT---------GAAGAGAACTCCAAATCCTTAATCCATTTTGAAGGCTGGCTGGAAGCAGGGCTTTCTATG-------GGCCTGGTAAGCAGCCCTGGTTGAATCATTTTAGAGAAGGGCAGG----TGTTCTTTCAAGGTTATagaaagaaaga-aag---aaaaaacaaaaac----agaaGCACATTTATAATGTTGGACAGTGTACCTTGTCCCAAGCCCTGTACAT-----------ATACTTTATTCCATAA i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64054719 449 + 204313951 TCTTGTAGCCTGGGATTAGCAGTAGCTGAAGCATGCTGCTTTCTGGCAGTTATGTTTATTTCTCAAGGGCACAGGCGG-TGCAGAACATGGGGGCCTGCTCCCT-------GCAGCTCAGCAGATCCTGGGATGAACCACAGTTGCTCTTCTGCCAGTTAAAAATTTGGGTCCTGTTCCATCTTGCATTTTCTCCCCCGCTTCCCAGTCCTCGCCAGCACCCTTTGATCCTGTGGGTGGAGAAAT---------GAAGATAACTCCAAATCCTTAATCCATTTTGAAGGCTGGCTGGAAGCAGGGCTTTCTATAATAATTCAGGCCGGTACACAGCACTGGTTGAATTATTTCCGAGAAGGCCAGG----TGCTCTTTCAAGGTTATAGAAAGAAAAA--AA--------------CC----AGAAGCACATTTATAATATTGGACAGTGTACCTTATCCCAAGCCCTGTACAT-----------TTGCTTGATTCCATAA i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2183452 447 + 10068113 TCTTGTAGCCTGGGATTAGCAGTAGCTGAAGCGTGCTGCTTTCTGGCAGCTATGTTTATTTCTCAAGGGCACAGGCGGCTGCAGAACACGGGAGCCTGCTCCCT-------GCAGCTCAGCAGATCCTAGGATGAACCACAGTTGCTATTCTGCTAGTTCAAAATTTGGGGCCTGTTCCACCTTGCGTTTTCTCCCCCGCTTCCCAGTCCTCGCCGGCACCCTTTGATCCTGTGGGTGGAGAAAT---------GAAGAGAACTCCAAATCCTTAATCCATTTTGAAGGCTGGCTGGAAGCAGGGCTTTCTATG-------GGCCTGGTACACAGCACTGGCTGAATTATTTCCGATAAGGCCAGG----TGCTCTTTCAAGGTTATAGAAAGAAAAA--AA----------AAACCC----AGAAGCACATTTATTATATTGGACAGCGTACCTTATCCCAAGCCCTGTACAT-----------TTACTTGATTCCATAA i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 38923 449 - 709587 TCTTGTAGCCTGGGATTAGCAGTAGCTGAAGCGTGCTGCTTTCTGGCAGTTATGTTTATTTCTCAAGGGCACAGGCGG-TGCAGAACATGGGGGCCTGCTCCCT-------GTAGCTCTGCAGATCCTAGGATGAACCACAGTTGCTCTTCTGCCAGTTCAAAATTTGGGGCCTGTTCCATCTTGCATTTTCTCCCCTGCTTCCCAGTCCTTGCCGGCACTCTTTGATCCTGTGGGTGGAGAAAT---------GAAGAGAACTCCAAATCCTTAATCCATTTTGAAGGCTGGCTGGAAGCAGGGCTTTCTATG-------GGCCTGGTACGCAGCACTGGTTGAATTCTTTCCGAGAAGGCCAGG----TGTTCTTTCAAGGTTATAGaaagaaaaa--aa-------aaaaaaaaC----AGAAGCACATTTATAAAATTGGACAGTGTACCTTATCCCAAGCCCTGTACAT-----------ATACTTGATTCCATAA i cebCap1.NW_016107999v1 M 1310 C 0 s aotNan1.NW_018501968v1 1139863 441 - 2246441 TCTTGTAGCCTGGGATTAGCAGTAGCTGAAGCGTGCTGCTTTCTGGCAGTTATGTTTATTTCTCAAGGGCACAGGCGG-TGCAGAACACGGGGGCCTGCTCCCT-------GCAGCTCAGTAGATACTAGGATGAACCACAGTCGCTCTTCTGCCAGTTCAAAATTTGGGGCCTGTTCCATCTTGCATTTTCTCCCCTGCTTCCCAGTCCTCGCCAGCACCCTTTGATCCTGTGGGTGGAGAAAT---------GAAGATAACTCCAAATCCTTAATCCATTTTGAAGGCTGGCTGGAAGCAGGGTTTTCTACG-------GGCCTGGTACACAGCACTGGTTGAATTATTTCCGAGAAGGCCAGG----TTCTCTTTCAAGGTTATAGAAAAAAAAA--C---------------CC----AGAAGCACATTTATAATATTGGACAATGTACCTTATCCTAAGCCCTGTACAT-----------TTGCTTGATTCCATAA i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 717337 452 - 940639 TCTTGTGGCCTGGGATTAGCAAGGGCTGAAGCCTGCTGCTTTCTGGCAGGGGTGTTTACTTCTCAAGGGCACAGGCAG-TGCAGAACGTGAAAGCCTGCTCCCT-------GGAGCTCGGCAGAGCCTGGCAGGAACCACAGCTGCTCTTCTGGCAGTTCACAATTTGGGGCTTGTTCCATCTTGCA-TTCCTCCCCCGCTTCCCAGCGCTTGCCTATGTCCTTTGACCCTGTGGGTGGAGAAATTGGAGAAATAAAGGGAACTCCAAATCCTTAATCCATTTTGAAGGCTGGCTGGAAGCAGGGCTTTCTAGG-------GGCC-------------TGGTTGAATCATTTCAGAGAAGGGCAGG----TGTTCTTTCAAGGTCATAGAATGTGGTG--AG---GGAAAGAAAAAACACCTGGAAGCACATTTGCAATATTTGATGGTATACCTTGTGCCAGGTCCTGTACAT-----------TGACTTTATTCCATAA i proCoq1.NW_012152163v1 C 0 C 0 s otoGar3.GL873522 1212293 464 + 48283576 TCTTGTGGCCTGGGATTAACAGTGGCTGAAGCATGCTGCTTTCTGGCAGTTGTGTTTGTTTCTCAAGGGCATAGGTGG-TACAGAACATGAGGGCCTGCTCCCT-------GCAGCTCATCGGAGCCTAGGAGGAACCACAGTTGCTCTTCTGCCAGTTTTAAATTTGGGGCCTGTTCCATCTTGCA-TTCTTCCCCCACTTCCCAGCCCTGGCCTGCATTCTTTGATCCTGTGGGTGGAGAAATTGGAGAAATAAAGGGAATTCCAAATCCTTAATTCATTTTGAAGGCTGGCTGGAAGCAGTGCTTTCTAGG-------GTCCTGGTAAACAGCATTGGTGGGATCATTTCACAGAAGGGCTGG----TATTCTTTCAAAGTCATAAAATGTGGTG--AC---GGAAAGAAAAAAC-CCTGGAAGAACAGTTATAATACTTGATGGTTTACCTTATGCCAGGCCTTGTCCAT-----------GGACTTTATTTCATAA i otoGar3.GL873522 C 0 C 0 s mm10.chr13 65974646 393 - 120421639 CTCTGGGTCTGGGGGTCAGCAGAA----ATGTGTGC------------------TTTAATTTCTAAAGACACAGACTG-TACAGGACGTG-GGGCCCATGCCCT-------GCAGCTTGGCT------------------AGTTGC-------------------TTGGGGTCTGCTCCATCTTGCA---CCCTCCCTGCTTGCCAGCTCTTTCCTGTGTTCTTTGATCTTGTGTGTAGAGTATT---------AAACTGAGCCTCAAATCCTTAATCCATTTTGAAGGCTGGCCGGGGGCAGCG-TTTCTATG-------GGCCCACTAAACAGCGCTGGCTGGATCGTTTTAGAGACGGGAAGGAGGTTTTCCATCCAAGGTCATGGAGTGTGAAT--AGGG-GGGGAAAGACAGT----TGAATCACCTTCATAGCCTTTGGAGCTATACCTCATG-CAAGCCCTGTATAT-----------TGA-TTTATTCCATAA i mm10.chr13 C 0 I 2082 s canFam3.chr4 37157817 460 + 88276631 TCTTGTGGCTGAGGATTAACCATAGCTGAAGCGTCCTGTTTTTTGGCAGCTGTGTTTATTTCTCAAGGGCACAAGCAG-AGCAGAACATGGGGGCCTGGGCCCT-------GCAGCTCAGGAGAGCCTAGGATGAACCACAGTTGTTCTTCTGCCAGTTCAAAACTCGG--CCTGTTCCATCTTGCA-TTCCTCCCCCGCTCCTCAGCCCTTGCCTGTACCCTTTGATCCTGTGGGTGGAGAAAG---------AAAGGGAATTCCAAATCCTTAATCCATTTTGGAGGCTGGCTGGAAGCAGGGCTTTCTAGG-------GGCGTGGTAAACAGCACTGGTTGAATCGTTCCAGAGAAGTGTGGG----TGCTCTTTCAAGGTCATAGAGTGTGGTG--AAGGAAGGAAAAGAAACT----GGAACTATACTGCTAGTATTTGATGGCACATCTTGTGCCAAGTCCTGTACATTGATGAG----TTGCTTTATTCTGCAT i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 229790 456 - 960158 TCTTGTGGCCTGGGATTAGTCGTGGCTGAAGCTTCCCAGTTT-GGGCAGCTGTGTTTATTTCTCAAGGGCACAAGTGG-CTCTGAACATGAGGACCTGCGGGT--------GCAGCTCTGCAGAGCCTCCAGTGAA--AGAGTTGCTCTTCTGCTGGTTCAAAACATGGGGCCTGCTCCATCTTTCA-TTCCTCTCCTGCTTCCCAGCCCTTGCCTGCATCCCT----CCTGTGGGTGGAGAAAT---------AACGGGAATTCCAAATCCTTAATCCATTTTGAAGTCTGGTGGGCAGCAGGGCTTTCTAGG-------AGCCTGAAGAATGGTGCTGGTTGAATCATTTCAAAGAAATGTGGG----TACTCTT--AAGGTTATAGTATGTGGTG--AGATAAGAAGAAAAAACT----GGAAGCATGTTAATAATATTTGAGAGTGTGCCTTTAGCCAAGCCCTGTACATTGAGGAGTTGCTTGCTTTGTTCCACAA i dasNov3.JH562710 C 0 C 0 a score=1255265.000000 s hg38.chr5_KI270795v1_alt 27179 104 + 131892 TAATAATAAAAGGTACTAGTGACAGCAGCGTCCGCTCACTGATTGTGTG--------GTAGGAgccaggtactatgctaagtgattttcatgtgttaactcttctaagcccg s panTro5.chr5 5275649 104 - 181907262 TAATAATAAAAGGTACTAGTGCCAGCAGCGTccgctcactgattgtgtg--------gtatgagccaggtaccatgctaagtgactttcatgtgttaactcttctaagcccg i panTro5.chr5 C 0 C 0 s panPan2.chr5 5538111 104 - 183735486 TAATAATAAAAGGTACTAGTGACAGCAGCGTccgctcactgattgtgtg--------gtatgagccaggtaccatgctaagtgactttcatgtgttaactcttctaagcccg i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1669941 104 + 3967317 TAATAATAAAAGGTACTAGTGACAGCAGCATccgctcactgattgtgtg--------gtatgagccaggtgctatgctaagtgattttcatgtgttaactcttctaagcccg i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4487868 104 + 163208435 TAATAATAAAAGGTACTAGTGACAGCAGCGTccgctcactgattgtgtg--------gtatgagccaggtactatgctaagtgattttcacgtgttaactcttctaacccca i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5720626 104 - 180051392 TAACAATAAAAGGTACTAGTGACAGCAGTGTCCACTCACCGATTGTGCG--------Gtatgagccaggtactatgctaagtgattttcatgtgttaactcttctaacccca i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5912418 104 - 181584905 TAACAATAAAAGGTACTAGTGACAGCAGTGTCCACTCACCGATTGTGCG--------Gtatgagccaggtactatgctaagtgattttcatgtgttaactcttctaacccca i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 941483 104 - 16193990 TAACAATAAAAGGTACTAGTGACAGCAGTGTCCACTCACCGATTGTGCG--------Gtatgagccaggtactatgctaagtgattttcatgtgttaactcttctaacccca i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1758485 104 - 21434487 TAATAATAAAAGGTACTAGTGACAGCAGCGTccactcaccgattgtgca--------gtatgagctgggtactatgctaagtgattctcctgtgttaactcttctaacccca i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4727362 104 - 82825804 TAACAATAAAAGGTACTAGTGACAGCAGCGTccactcactgattgtgcg--------gtgtgagccgggtactttgctaagtgattttcatgtgttaactcttctaacccca i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 222705 104 + 2521317 TAATAATAAAAGGTACTAGTGACAGCAGCGTCCACTCACCGATTGTGCG--------Gtatgagccgggtactatgctaagtgattctcatgtgttaactcttctaacccca i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1713744 104 - 2415367 TAATAATAAAAGGTACTAGTGACAGCAGCGTccactcactgattgtgcg--------gtatgagccaggtactatgctaagtgattttcatgtgttaactcttctaacccca i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64055168 101 + 204313951 CAGTAATAAAAGATACCAGTGACAGCAG-GTccactcactgattgtgta--------gtatgagccaggcactatgctaagtgattttcatgtgttaa--cttctaacccta i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2183899 101 + 10068113 CAATAATAAAAGATACCAGTGACGGCTG-GTCcactcactgattgcgta--------gtatgagccaggcactatgctaagtgattttcatgtgttaa--cttctaacccta i saiBol1.JH378186 C 0 I 543 s cebCap1.NW_016107999v1 39372 101 - 709587 CAGTAATAAAAGATACCAGTGACAGCAG-GTCTACTCGCTGATTGTGTG--------Gtatgagccaggcactatgctaagtgattttcatgtgttaa--cttctaatctta i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1140304 101 - 2246441 CAGTAATAAAAGATACCAGTGACAGCAG-GTccactcactgattgtgta--------gtatgagccaggcactatgctaagtgattttcatgtgttaa--cttctaacccta i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 717789 109 - 940639 TAATAATAAAAGGTACCAATGACAACAACTTCCACTCACTG---GTATGGACCAGTGGtatggaccaggtgctatgctaagtgattttcacatattaacacttctaacccta i proCoq1.NW_012152163v1 C 0 C 0 s otoGar3.GL873522 1212757 82 + 48283576 TACTAATAAAAGGTACCAATGACAGCA------------------------------GTACAAACCAGGTGCTATGCTGAGTGATTTTCACATATTAACACTTCTAACTGTA i otoGar3.GL873522 C 0 C 0 s canFam3.chr4 37158277 83 + 88276631 GAATAATAAAAGGTACCAGCGGTAGCAATCTGCTCTTGCTGattgtgct-----------------------------aagtgatattcacatacttactcttttcaccctc i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 230246 99 - 960158 GATTAGGGAATGGTGCCATTGACAGCCTCCTccatttagtgactgtgtg--------ctatg-gccaggtgctgtgctaagtgattttcacatatt----cttttaacacta i dasNov3.JH562710 C 0 C 0 e mm10.chr13 65975039 2082 - 120421639 I a score=187113.000000 s hg38.chr5_KI270795v1_alt 27283 14 + 131892 gtaactgcccgtga s panTro5.chr5 5275753 14 - 181907262 gtaactgcccgtga i panTro5.chr5 C 0 C 0 s panPan2.chr5 5538215 14 - 183735486 gtaactgcccgtga i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1670045 14 + 3967317 gtaactgcccgtga i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4487972 14 + 163208435 gtaactgcccataa i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5720730 14 - 180051392 gtaactgcccatga i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5912522 14 - 181584905 gtaactgcccatga i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 941587 14 - 16193990 gtaactgcccatga i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1758589 14 - 21434487 gtaactgcccatga i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4727466 14 - 82825804 gtaactgcccatga i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 222809 14 + 2521317 gtaactgcccatga i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1713848 14 - 2415367 gtaactgcccatga i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64055269 14 + 204313951 gtaactgcccatga i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2184543 14 + 10068113 GTAACTGCCCGTGA i saiBol1.JH378186 I 543 C 0 s cebCap1.NW_016107999v1 39473 14 - 709587 gtaactgcccgtga i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1140405 14 - 2246441 gtaactgcccatga i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 717898 14 - 940639 ataactacctgtga i proCoq1.NW_012152163v1 C 0 I 2 s otoGar3.GL873522 1212839 14 + 48283576 CTAACTGCCTATAA i otoGar3.GL873522 C 0 C 0 s canFam3.chr4 37158360 14 + 88276631 agaactgcccatga i canFam3.chr4 C 0 I 2 s dasNov3.JH562710 230345 6 - 960158 ataagt-------- i dasNov3.JH562710 C 0 C 0 e mm10.chr13 65975039 2082 - 120421639 I a score=1390012.000000 s hg38.chr5_KI270795v1_alt 27297 107 + 131892 gattattaatcctgcagaaactgaggctcagggaggtcccagtaacacacatcgggccaaagaatggtgctattagaaattcagaccagtgtgtctgactccaGTTT s panTro5.chr5 5275767 107 - 181907262 gattattaatcctgcagaaactgaggctcagggaggtcccagtaacacacatcgggccaaagaatggtgctattagaaattcagaccagtgtgtctgactccaGTTT i panTro5.chr5 C 0 C 0 s panPan2.chr5 5538229 107 - 183735486 gattattaatcctgcagaaactgaggctcagggaggtcccagtaacacacatcgggccaaagaatggtgctattagaaattcagaccagtgtgtctgactccaGTTT i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1670059 107 + 3967317 gattattaatcctgcagaaactgaggctcagggaggtcccagtaacacacatcgggccaaagaatggtgctattagaaattcagaccagtgtgtctgactccaGTTT i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4487986 107 + 163208435 gattattaatcctgcagaaactgaggctcagggaggtcacagtaacacacatagggccaaagaatggtgctattagaaattcagaccagtgtgtctgactccaaTTT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5720744 107 - 180051392 gattgttaatcctgcagaaactgaggctcaggaaggtcacagtaacacgcatagggccaaagaacggtgctattagaaattcaaaccagtgtgtctgactccaaCTT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5912536 107 - 181584905 gattgttaatcccgcagaaactgaggctcaggaaggtcacagtaacacacatagggccaaagaacggtgctattagaaattcaaaccagtgtgtctgactccaaCTT i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 941601 107 - 16193990 gattgttaatcctgcagaaactgaggctcaggaaggtcacagtaacacacatagggccaaagaacggtgctattagaaattcaaaccagtgtgtctgactccaaCTT i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1758603 107 - 21434487 gattgttaatcctgcagaaactgagactcagaaaggtcacagtaacacacatagggccaaagaacggtgctattagaaattcaaaccagtgtgtctgactccaaCTT i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4727480 107 - 82825804 gattgttaatcctgcagaaactgaggctcaggaaggtcacagtaacacacatagggccaaagaatggtgctgttagaaattcaaaccagtgtgtctgactccaaCTT i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 222823 107 + 2521317 gattgttaatcctgcagaaactgaggctcagaaaggtcacagtaagacacacaggggcaaagaacggtgctattagaaattcgaaccagtgtgtctgactccaGCTT i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1713862 107 - 2415367 gattattaatcctgcagaaactgaggctcaggaaggtcacagtaacacacatagggccaaagaatggtgctattagaaattcaaaccagtgtgtctgactccaaCTT i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64055283 107 + 204313951 gattgttaattctgcagaaattgaggctcagggaggtcacagtaacacacatagggccaaagaatgatgctattagaaattcaaaccagtgtgtctgactgcaaCTT i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2184557 105 + 10068113 GATTGTTAATCCtgcagaaactgaggctcagggaggtcacagta--acacatagggccaaagaatgatgctattagaaattcaaaccagtgtgtctgactccaGCTT i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 39487 107 - 709587 gattgttaatcctgcagaaactgaggctcagggaggtcacagtaacacacatagggccaaagaatgatgctattagaaattcaaaccagtgtgtctgactccaaCTT i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1140419 107 - 2246441 gattgttaatcctgcagaaactgaggttcagggaggtcacagtaacacacatagggccaaagaatgatgctattagaaattcaaaccagtgtgtctgactgcaaCTT i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 717914 107 - 940639 tatcattaatcctgaagaaactgaggctcagggaggttacagtagcatgcatggggccaaagactggtactgttagaaattcaaaccagcgtgtctgactccaaagt i proCoq1.NW_012152163v1 I 2 I 14 s canFam3.chr4 37158376 91 + 88276631 tattattaatcctgaagaaactgagacttagagaggttaCAGTCGGATGCATTTGGCCAAAGAATGGTGCTATTAGAAATTCA-------------GCATCCAG--- i canFam3.chr4 I 2 C 0 s dasNov3.JH562710 230351 95 - 960158 -attattggtcctggagaaactgagactcagcgaggctacagaa------atagggccatagaaaggtgctattaggaattcaggccagtctgcctgactcc----- i dasNov3.JH562710 C 0 C 0 e mm10.chr13 65975039 2082 - 120421639 I e otoGar3.GL873522 1212853 0 + 48283576 C a score=265472.000000 s hg38.chr5_KI270795v1_alt 27404 27 + 131892 GCTAAAAACCTGCCTGCTGTCCAAG-------CT s panTro5.chr5 5275874 27 - 181907262 GCTAAAAACCTGCCTGCTGTCCAAG-------CT i panTro5.chr5 C 0 C 0 s panPan2.chr5 5538336 27 - 183735486 GCTAAAAACCTGCCTGCTGTCCAAG-------CT i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1670166 27 + 3967317 GCTAAAAACCTGCCTGCTGTCCAAG-------CT i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4488093 34 + 163208435 GCTAAAAACCTGCCTGCTGTCCAAGCTTCTTCCT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5720851 34 - 180051392 GCTAAAAACCTGCCTGCTGTCCAGACTCCTTCCT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5912643 34 - 181584905 GCTAAAAACCTGCCTGCTGTCCAGACTCCTTCCT i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 941708 34 - 16193990 GCTAAAAACCTGCCTGCTGTCCAGACTCCTTCCT i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1758710 34 - 21434487 GCTAAAAACCTGCCTGCTGTCCAGACTCCTTCCT i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4727587 34 - 82825804 GCTAAAAACCTGCCTGCTGTCCAGACTCCTTCCT i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 222930 34 + 2521317 GCTGAAAACCTGCCTGCTGTCCAGACTCCTTCCT i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1713969 34 - 2415367 GCTAAAAACCTGCCTGCTGTCCAGACTCCTTCCT i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64055390 34 + 204313951 GCTAAAAACCTACCTGCTGTTCACGCTCCTTCCT i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2184662 34 + 10068113 GCTGATAACCTGTCTGCTGTTCATGCTCCTTCCT i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 39594 34 - 709587 GCTAAAAACCTGCCTGCTGTTCACGCTCCTTCCT i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1140526 34 - 2246441 GCTAAAAACCTGCCTGCTGTTCACGCTCCTTCCT i aotNan1.NW_018501968v1 C 0 C 0 s canFam3.chr4 37158467 9 + 88276631 -------GTCTTTGTG------------------ i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 230446 19 - 960158 ----aaaatctg-----------agctctttccC i dasNov3.JH562710 C 0 C 0 e mm10.chr13 65975039 2082 - 120421639 I e otoGar3.GL873522 1212853 0 + 48283576 C e proCoq1.NW_012152163v1 718021 14 - 940639 I a score=692233.000000 s hg38.chr5_KI270795v1_alt 27431 53 + 131892 CCAGAATCACTGGGCATGGTCGATTCCATTTTTAGCCCAGCTCTTTCCAAAAG----- s panTro5.chr5 5275901 53 - 181907262 CCAGAATCACTGGGCATGGTCGATTCCATTTTTAGCCCAGCTCTTTCCAAAAG----- i panTro5.chr5 C 0 C 0 s panPan2.chr5 5538363 53 - 183735486 CCAGAATCACTGGGCATGGTCGATTCCATTTTTAGCCCAGCTCTTTCCAAAAG----- i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1670193 53 + 3967317 CCAGAATCACTGGGCATGGTCGATTCCATTTTCAGCCCAGCTCTTTCCAAAAG----- i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4488127 53 + 163208435 CCAGAATCACTGGGCATGGTCGATTCCATTTTTAGCCCAGCTCTTTCCAAAAG----- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5720885 53 - 180051392 CCAGAATCACTGGGCATGGTTGACTCCATTTTTAGCCCAGCTCTTTCCAAAAG----- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5912677 53 - 181584905 CCAGAATCACTGGGCATGATTGACTCCATTTTTAGCCCAGCTCTTTCCAAAAG----- i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 941742 53 - 16193990 CCAGAATCACTGGGCATGGTTGACTCCATTTTTAGCCCAGCTCTTTCCAAAAG----- i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1758744 53 - 21434487 GCAGAATCACTGGGCATGGTTGACTCCATTTTTAGCCCAGCTCTTTCCAAAAG----- i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4727621 53 - 82825804 CCAGAATCACTGGGCATGGTTGACTCCATTTTTAGCCCAGCTCTTTCCAAAAG----- i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 222964 53 + 2521317 CCGGAATCACTGGGCATGGTTGACTCCATTTTTAGCCCAGCTCTTTCCAAAAG----- i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1714003 53 - 2415367 CCAGAATCACTGGGCATGGTTGATTCCATTTTTAGCCCAGCTCTTTCTAAAAG----- i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64055424 53 + 204313951 CCAGAATCACTGGGCATGATCGATTCCATTTTTAGCCCAGCTCTTTCCAAAAG----- i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2184696 53 + 10068113 CCAGAATCACTGGGCATGGTCGATTCCATTTTTAGCCCAGCTCTTTCCAAAAG----- i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 39628 53 - 709587 CCAGAATCACTGGGCATGGTCGATTCCATTTTTAGCCCAGCTTTTTTCAAAAG----- i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1140560 53 - 2246441 CCAGAATCACTGGGCATGATCGATTCCATTTTTAGCCCAGCTCTTTCCAAAAG----- i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 718035 53 - 940639 TCAGAAATATTGGGCATGGTTTATTCCATTTTCAGCCCAGCTCTTTCCAGAAG----- i proCoq1.NW_012152163v1 I 14 I 9 s canFam3.chr4 37158476 47 + 88276631 TCAGCAATGTT-GGTATGGTCAGTTCTACTTTT-----ACCTCTTTCCAGGAG----- i canFam3.chr4 C 0 I 4 s dasNov3.JH562710 230465 58 - 960158 TTAGGAATAATGGACATGGTCAATTCCATTTTGAACGAAACTCTTTCCAGAAGTGGAG i dasNov3.JH562710 C 0 C 0 e mm10.chr13 65975039 2082 - 120421639 I e otoGar3.GL873522 1212853 0 + 48283576 C a score=38367.000000 s hg38.chr5_KI270795v1_alt 27484 4 + 131892 ACAT--- s panTro5.chr5 5275954 4 - 181907262 ACAT--- i panTro5.chr5 C 0 C 0 s panPan2.chr5 5538416 4 - 183735486 ACAT--- i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1670246 4 + 3967317 ACAT--- i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4488180 4 + 163208435 ACAT--- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5720938 4 - 180051392 ACAT--- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5912730 4 - 181584905 ACAT--- i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 941795 4 - 16193990 ACAT--- i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1758797 4 - 21434487 ACAT--- i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4727674 4 - 82825804 ACAT--- i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 223017 4 + 2521317 ACAT--- i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1714056 4 - 2415367 ACAT--- i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64055477 4 + 204313951 ACAT--- i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2184749 4 + 10068113 ACAT--- i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 39681 4 - 709587 ACAT--- i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1140613 4 - 2246441 ACAT--- i aotNan1.NW_018501968v1 C 0 C 0 s canFam3.chr4 37158527 4 + 88276631 GTAT--- i canFam3.chr4 I 4 I 1 s dasNov3.JH562710 230523 4 - 960158 ---TCTC i dasNov3.JH562710 C 0 C 0 e mm10.chr13 65975039 2082 - 120421639 I e otoGar3.GL873522 1212853 0 + 48283576 C e proCoq1.NW_012152163v1 718088 9 - 940639 I a score=3275421.000000 s hg38.chr5_KI270795v1_alt 27488 263 + 131892 TAGGCATTAGACAGGAGAAGGCCATGGTTTTTACAAAGCAGTCTGTTTAGTATTCATGATCCtatagcataa-gat-tcagttaagagcagggattcagagccagattgcctgggttcaagtcctggctctgccacttaccatctttgcaaccttgggcaaattctttgatgtctgagccttagttttttcatttgtaaaatgggg---gataa---tggtagccacctcattggttttctctgagggttaaatgagttaatatatgtaaa s panTro5.chr5 5275958 263 - 181907262 TAGGCATTAGACAGGAGAAGGCCATGGTTTTTACAAAGCAGTCTGTTTAGTATTCATGATCCtatagcataa-gat-tcagttaagagcagggattcagagccagattgcctgggttcaagtcctggctctgccacttaccatctttgcaaccttgggcaaattctttgatgtctgagccttagttttttcatttgtaaaatgggg---gataa---tggtagccacctcattggttttctctgagggttaaatgagttaatatatgtaaa i panTro5.chr5 C 0 C 0 s panPan2.chr5 5538420 263 - 183735486 TAGGCATTAGACAGGAGAAGGCCATGGTTTTTACAAAGCAGTCTGTTTAGTATTCATGATCCtatagcataa-gat-tcagttaagagcagggattcagagccagattgcctgggttcaagtcctggctctgccacttaccatctttgcaaccttgggcaaattctttgatgtctgagccttagttttttcatttgtaaaatgggg---gataa---tggtagccacctcattggttttctctgagggttaaatgagttaatatatgtaaa i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1670250 263 + 3967317 TAGGCATTAGACAGGAGAAAGCCATGGTTTTTACAAAGCAGTCTGTTTAGTATTCATGATCCtatagcataa-gat-tcagttaagagcagggattcagggccagattgcctgggttcaagtcctggctctgccacttatcatctttgcaaccttgggcaaattctttgatgtctgagccttagttttttcatttgtaaaatgggg---gataa---tagtagccacctcattggttttctctgagggttaaatgagttaatatatgtaaa i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4488184 263 + 163208435 TAGGCATTAGAAAGGAGAAGGCCATGGTTTTTACAAAACAGTCTGTTTAGTATTCATGGTCCtatagcataa-gat-tcagttaagagcagggattcagagccagattgcctgggttcaagtcctggctctgccacttaccatctttgcaaccttgggcaaattctttgatgtctgagccttagttttttcatttgtaaaatgggg---gataa---tagtagccacctcattggttttctctgagggttaaataagttaataaatgtaaa i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5720942 254 - 180051392 TAGACATTAGAAAGGAGAAGGCCATGGCTTCTACAAAAC---------AGCATTCACGATCCTGTCGCGTAA-GAT-TCAGCTCagagcagggattcagagccagattgcctgggttcaagtcctggctctgcgacttaccatctttgcaaccttgggcaaattctttgatgtctgagccttagttttttcatttgtaaaatgggg---gatga---tagtagccacctcattggttttctctgagggttaaatgggttaatataggtaaa i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5912734 254 - 181584905 TAGACATTAGAAAGGAGAAGGCCATGGCTTCTACAAAAC---------AGCATTCACGATCCTGTCGCGTAA-GAT-TCAGCTCagagcagggattcagagccagattgcctgggttcaagtcctggctctgcgacttaccatctttgcaaccttgggcaaattctttgatgtctgagccttggttttttcatttgtaaaatgggg---gatga---tagtagccacctcattggttttctctgagggttaaatgggttaatataggtaaa i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 941799 254 - 16193990 TAGACATTAGAAAGGAGAAGGCCATGGCTTCTACAAAAC---------AGCATTCACGATCCTGTCGCGTAA-GAT-TCAGCTCaaagcagggattcaaagccagattgcctgggttcaagtcctggctctgcaacttaccatctttgcaaccttgggcaaattctttgatgtctgagccttagttttttcatttgtaaaatgggg---gatga---tagtagccacctcattggttttctctgagggttaaatgggttaatataggtaaa i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1758801 263 - 21434487 TAGACATTAGAAAGGAGAAGGCCATGGCTTCTACAAAACAGTCTGTCTAGCACTCACGATCCTGTCGCGTAA-GAT-TCAGCTCagagcagggattcagagccagattgcctgggttcaagtcctggctctgcgacttaccatctttgcaaccttgggcaaattctttgatgtctgagccttagttttttcatttgtaaaatgggg---gatga---tagtagccacctcactggttttctctgagggttaaatgagttaatatatgtaaa i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4727678 263 - 82825804 TAGACATTAGAAAGGAGAAGGCCATGGCTTCTACAAAACAGTCTGTCTAGCATTCACGATCCTGTCGCATAA-GAT-TCAGCTCagagcagggattcagagccagattgcctgggttcaagtcctggctctacgacttaccatctttgcaaccttgggcaaattctttgatgtctgagccttagttttttcatttgtaaaatgggg---gatga---tagtagccacctcactggttttctctgagggttaaatgggttaatatatgtaaa i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 223021 263 + 2521317 TAGACATTAGAAAGGAGAAGGCCATGGCTTCTACAAAACAGCCTGTCTAGCACTCACGATCCTGTCGCGTAA-GAT-TCAGCTCagagcagcgattcagagccagattgcctgggttcaagtcctggctctgcgacttaccatctttgcaaccttgggcaaattctttgatgtctgagccttagttttttcatttgtaaaatgggg---gatga---tagtagccacctcactggttttctctgagggttaaatgagttaatatatgtaaa i manLeu1.NW_012103943v1 C 0 M 310 s colAng1.NW_012115755v1 1714060 263 - 2415367 TAGACATTAGAAAGGAGAAGGCCGTGGTTTCTACAAAACAATCTGTTTAGCATTCATGATCCTGTCGCATAA-GAT-TCAGCTCagagcagggattcagagccagattgcctgggttcgagtcctggctctgcgacttaccatctttgcaaccttgggcaaattctttgatgtctgagccttagttttttcatttgtaaaatgggg---gatga---tagtagccacctcattggttttctctgagggttaaatgagttgatatatgtaaa i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64055481 261 + 204313951 TAGGCATTAGAAAGGAGAAGGCCATGGTTATTATAAAACAGTC--TTCAGTACTCATAATCCtatagcataa-gat-ccagttaagagcagggattcagagccagattgcctgggttcaagtcctggctctgccacttaccatctttgcaaccttgggcaaattctttgatgcctgagccttagtattttcatttgtaaaatgcag---gatag---tagtagccacctcgctggtttgctctgaggattaaatgagataatgcatgtaaa i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2184753 261 + 10068113 TAGACATTAGAAAGGAGAAGGCCATGGTTGTTACAAAACAGTC--TTCAGTACTCATAATCCTATAGTGTAA-GAT-CCAgttaagagcagggattcagagccagattgcctgggttcaagtcctggctctgccacttaccatctttgcaagcttgggcaaattctctgatgcctgggccttagtattttcacttgtaaaatgcag---gatag---tagtagccacctcactggtttgctctgagggttaaatgagataatacatgtaaa i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 39685 261 - 709587 TAGACATTAGAAAGGAGAAGGCCATGGTTATTACAAAACAGGC--TTCAGTACTCATAATCCtatagcataa-gat-ccagttaagagcagggattcagagccagattgcgtgggttcaagtcctagctctgccacttaccatctttgcaaccttgggcaaattctttgatgcctgagtcttagtattttcttttgtaaaatgtag---gacag---tagtagccacctcactggtttgctctgaggattaaatgagataatacatgtaaa i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1140617 261 - 2246441 TAGACTTTAGAAAGGAGAAGGCCATGGTTATTACAAAACAGTC--TTCAGTACTCATAATCCtatagcataa-gat-ccagttaagagcagggattcagagccagattgcctgggttcaagtcctggctctgccacttaccatctttgcaacattgggcaaattctttgatgcctaagccttagtattttcatttgtaaaatgcag---aatag---tagtagccacctcactggtttgctctgagggttaaatgagataatacatgtaaa i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 718097 267 - 940639 TAGACATTAGAAAGGAGAAGGCCAGGGTTATTATAAAACAGCCTATTAAGTACTTACGGTCCTacagtacag-ggtgccagttaagagcatgaatttggagccagatggcctaggttcaaattctggctttgccacttaccatctttgtgtccttgggcaaatactttgatgtctgagtctaagttttctcatttgtcaaatgtggaataataa---tagtagctaccttactggtttgctctgagggttaaatgagttaatacacataaa i proCoq1.NW_012152163v1 I 9 C 0 s canFam3.chr4 37158532 266 + 88276631 TAGACGTTAGGAAGgagaaggctgggcttatgacagatcagccagta-agtattcatgatcccacagcatagtgga-ccagctgcaagtaaggctttggaaccagattacctgggttcaaatcctggctctgccacttaccttgtctgtgaccttgggcaaactctttgacacctgagccttactttcctcacttgtaaaatgggg---gataatagtagtagctaactcactagtgtgctttgagggttaaaggagttaatacatgcaga i canFam3.chr4 I 1 C 0 s dasNov3.JH562710 230527 260 - 960158 TAG--ATTTGGAAGGAGAAGGTCAGGGTTAGGAGGAAACAGCCTGTTCAGGACTCATGGTTGCacagcatag-tataccaggtaggagcgtgggtgtggagccaggttgcctgggttcaagggctggccctgccacttacc-tctctgtgaccttgggcaaattacttgacctctgagcttcagtttcctcatctgtaaaacg-gg---gttaa---tagtagctacctcaggtgtttgttctaagggttgaacgaattaatacatataat i dasNov3.JH562710 C 0 C 0 e mm10.chr13 65975039 2082 - 120421639 I e otoGar3.GL873522 1212853 0 + 48283576 C a score=1528012.000000 s hg38.chr5_KI270795v1_alt 27751 140 + 131892 gtgcttagattagtgctgggcactaagtaata----cctcagtagatg----------------------------------gtagctattgtCATCATCATC---ATTATTCTTAACCATTATGCTGTATTCACCCATATATTCTCAGTGCCTGACTTATATTAGGGGTTGGTGAATATT---- s panTro5.chr5 5276221 140 - 181907262 gtgcttagattagtgctgggcactaagtaata----cctcagtagatg----------------------------------gtagctattgtCATCATCATC---ATTATTCTTAACCATTATGCTGTATTCACCCATATATTCTCAGTGCCTGACTTATATTAGGGGTTGGTGAATATT---- i panTro5.chr5 C 0 C 0 s panPan2.chr5 5538683 140 - 183735486 gtgcttagattagtgctgggcactaagtaata----cctcagtagatg----------------------------------gtagctattgtCATCATCATC---ATTATTCTTAACCATTATGCTGTATTCACCCATATATTCTCAGTGCCTGACTTATATTAGGGGTTGGTGAATATT---- i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1670513 140 + 3967317 gtgcttagattagtgctgggcactaagtaata----cctcagtagatg----------------------------------gtagctattgtCATCATCATC---ATTATTCTTAACCATTATGCTGTATTCACCCATATATTCTCAGTGCCTGACTTATATTAGGGGTTGGTGAATATT---- i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4488447 140 + 163208435 gtgcttagattagtgctgggcactaagtaata----cctcagtagatg----------------------------------gtagctattgtCATCATCATC---ATTATTCTTAACCATTATGCTGTATTCACCCATATATTCTCAGTGCCTGACTTATATTAGGGGTTGGTGAATATT---- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5721196 140 - 180051392 gtgcttagattagtgctgggcactaaggaata----cctcagtggatg----------------------------------gtagctattgtCATCATCATC---ATTATTCTTAACCATTATGCTGTATGCACCCATATATTCTCAGTGCCTGACATATATTAGGCATTGGTGAATATT---- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5912988 140 - 181584905 gtgcttagattagtgctgggcactaaggaata----cctcagtagatg----------------------------------gtagctattgtCATCATCATC---ATTATTCTTAACCATTATGCTGTATGCACCCATATATTCTCAGTGCCTGACATATATTAGGCATTGGTGAATATT---- i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 942053 140 - 16193990 gtgcttagattagtgctgggcactaaggaata----cctcagtagatg----------------------------------gtagctattgtCATCATCATC---ATTATTCTTAACCATTATGCTGtatgcacccatatattctcagtgcctgacatatattaggcattggtgaatatt---- i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1759064 174 - 21434487 gtgcttagattagtgctgggcactaaggaata----cctcagtagatgtatcatcatcatcatcattattattatcattattattattattgtcatcatcatc---attattCTTAACCATTATGCTGtatgcacccatatattctcagtgcctgacatatattaggcgttggtgaatatt---- i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4727941 140 - 82825804 gtgcttagattagtgctgggcactaaggaata----cctcagtagatg----------------------------------gtagctattgtCATCATCATC---ATTATTCTTAACCATTATGCTGTATGCACCCATATATTCTCAGTGCCTGACATATATTAGGCGTTGGTGAATATT---- i chlSab2.chr23 C 0 C 0 s colAng1.NW_012115755v1 1714323 140 - 2415367 gtgcttagattagtgctaggcactaaggaata----cctcagcagatg----------------------------------gtagctattgtCATCATCATC---ATTAATCTTAACCATTATGCTGTATGCACCCATATATTCTCAGTGCCTGACATATATTAGGCGTTGGTGAATATC---- i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64055742 140 + 204313951 gtccttagattagtgctgggcactaagtaata----cctcagtagatg----------------------------------gtagctattGCCATCATCATC---ATCATTCTTAACCATTATGCGGTATTCATCCGCATATTCTCAGTGCCTGACATATATTAGGGGTTGGTGAATACT---- i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2185014 130 + 10068113 gtgcttagattagtgctgggcac----taata----tctcagtagatg----------------------------------gtagctattg------tCATT---ATCATTCTTAACCATTATGCTGTGTTCACCCGCATATTCTCAGTGCCTGATATATATTAGGGTTTGGTGAACATT---- i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 39946 136 - 709587 gagcttaga-tagtgctgggcactaagtaata----tctcagtggatg----------------------------------gtagctattg---tCATCATC---ATCATTCTTAACCATTACGCTGtattcaccctcatattctcagtgcctgacatatattagggtttggtggatatt---- i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1140878 137 - 2246441 gtgcttagattagtgctgggcactaagtaata----tcttagtagatg----------------------------------gtagctattg---tCATCATC---ATCATTCTTAACCATTATGCTGTATTCACCCACATATTCTCAGTGCCTGACATATATTAGGGGTTGGTGAATATT---- i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 718364 140 - 940639 gtgcttagattagtgcctggcacaaagtaaga----cctcagtaaatg----------------------------------gtagctatcattATTATCATC---ATTATTTTTAACCattatgccatattcctccctgtgcttttagtacctggcacagattagggcttgacgaatgtt---- i proCoq1.NW_012152163v1 C 0 I 47 s canFam3.chr4 37158798 141 + 88276631 gtgcttagatcagcacctggcacaaggtaataaatgactcagtaaatg----------------------------------ttagctcttg---ttATTGTC---ATTGTTTTTAACCATCATACTGtgttcacctctgtattctcagtgcctggtgtatactaggggttggtgtatgtt---- i canFam3.chr4 C 0 I 4 s dasNov3.JH562710 230787 147 - 960158 gcgcttagatcagtccctggcacaaagaaata----agccagtaaagg----------------------------------ttagctattattATGATTATCCTAATTATTTTTAGTCGTGgtgccttaatcacctctgtattctcggtgcctggcacatactaggtgttggtgaatgtttatt i dasNov3.JH562710 C 0 C 0 e mm10.chr13 65975039 2082 - 120421639 I e otoGar3.GL873522 1212853 0 + 48283576 C e manLeu1.NW_012103943v1 223284 310 + 2521317 M a score=309986.000000 s hg38.chr5_KI270795v1_alt 27891 47 + 131892 GAATAAAATGATCCTTTGGATTCAGA----------------------------------------------------------------ttttttttt-------------tttt--------------------------ttttGAG--T s panTro5.chr5 5276361 47 - 181907262 GAATAAAATGATCCTTTGGATTCAGA----------------------------------------------------------------ttttttttt-------------tttt--------------------------ttttGAG--T i panTro5.chr5 C 0 C 0 s panPan2.chr5 5538823 45 - 183735486 GAATAAAATGATCCTTTGGATTCAGA------------------------------------------------------------------TTTTTTT-------------TTTT--------------------------TTTTGAA--T i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1670653 45 + 3967317 GAATAAAATGATCCTTTGGATTCAGA------------------------------------------------------------------TTTTTTT-------------TTTT--------------------------TTTTGAG--T i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4488587 51 + 163208435 GAATAAAATGATCCTTTGGATTCAGA-tt-------------------------------------------------------------ttttttttt-------------tttt--------------------------ttttGAGTTT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5721336 52 - 180051392 GAATAAAATGATCCTTTGGATTCAGAAtt-------------------------------------------------------------ttttttttt-------------tttt--------------------------ttttGAGTTT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5913128 52 - 181584905 GAATAAAATGATCCTTTGGATTCAGAAtt-------------------------------------------------------------ttttttttt-------------tttt--------------------------ttttGAGTTT i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 942193 50 - 16193990 gaataaaATGATCCTTTGGATTCAGAA---------------------------------------------------------------ttttttttt-------------tttt--------------------------ttttGAGTTT i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1759238 52 - 21434487 gaataaaATGATCCTTTGGATTCAGAAtt-------------------------------------------------------------ttttttttt-------------tttt--------------------------ttttGAGTTT i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4728081 78 - 82825804 GAATAAAATGATCCTTTGGATTCAGAAtt-------------------------------------------------------------ttttttttt-------------tttttttttttttttttttttttttttttcttttgtgttt i chlSab2.chr23 C 0 C 0 s colAng1.NW_012115755v1 1714463 49 - 2415367 AAATAAAATGATCCTTTGGATTCAGAAtt-------------------------------------------------------------ttttttttt-------------tttt--------------------------tt---agttt i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64055882 45 + 204313951 GAATAAAGTAATCCTTTGGATTCAGGATT--------------------------------------------------------------------TT-------------TTTT--------------------------TTTTGAGCTT i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2185144 60 + 10068113 GAATAAAGTGATACTTTGGATTCAGGTTTT-------------TGG----------------------------------------TTTTTGTTTTGTT-------------TTGT--------------------------TTTTTAGCTT i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 40082 52 - 709587 gaataaaGTGATCCTTTGGATTCAGGAtt-------------------------------------------------------------ttttttttt-------------tttt--------------------------ttttGAGCTT i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1141015 49 - 2246441 GAATAAAGTGATCTTTTGGATTCAGGATT----------------------------------------------------------------TTTTTT-------------TTTT--------------------------TTTTGAGCTT i aotNan1.NW_018501968v1 C 0 C 0 s canFam3.chr4 37158943 113 + 88276631 gaatgagatgaGCCCTTGAATTCAGGAATTATTTTCTGAGCTCTGGAAAGTGACAACTGCTAGCTCGATATATAAATGATACCATtttatttatttatt-------------tatt--------------------------tatttaattt i canFam3.chr4 I 4 I 9 s dasNov3.JH562710 230934 63 - 960158 gaatgaaACGATCCCTTGGATTGAGAAAA-------------------------------------------------------------TATTTTCTGAATCCTGAGAaaatatt--------------------------ttctgaat-- i dasNov3.JH562710 C 0 I 2 e mm10.chr13 65975039 2082 - 120421639 I e otoGar3.GL873522 1212853 0 + 48283576 C e proCoq1.NW_012152163v1 718504 47 - 940639 I e manLeu1.NW_012103943v1 223284 310 + 2521317 M a score=247092.000000 s hg38.chr5_KI270795v1_alt 27938 28 + 131892 TGGCG-------------------------------------------------------------------------------------------GGTGCCAGGAGCTAGC------------------------TTGATAT s panTro5.chr5 5276408 28 - 181907262 TGGCG-------------------------------------------------------------------------------------------GGTGCCAGGAGCTAGC------------------------TTGATAG i panTro5.chr5 C 0 C 0 s panPan2.chr5 5538868 28 - 183735486 TGGCG-------------------------------------------------------------------------------------------GGTGCCAGGAGCTAGC------------------------TTGATAG i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1670698 28 + 3967317 TGGCG-------------------------------------------------------------------------------------------Ggtgccaggagctagc------------------------ttgatat i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4488638 28 + 163208435 TGGCG-------------------------------------------------------------------------------------------Ggtgccaggagctagc------------------------ttgatat i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5721388 28 - 180051392 TGGAG-------------------------------------------------------------------------------------------GGTACCAGGAGCTAGC------------------------TTGATGT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5913180 28 - 181584905 TGGAG-------------------------------------------------------------------------------------------Ggtaccaggagctagc------------------------ttgatgt i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 942243 28 - 16193990 TGGAG-------------------------------------------------------------------------------------------GGTACCAGGAGCTAGC------------------------TTGATGT i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1759290 28 - 21434487 TGGAG-------------------------------------------------------------------------------------------GGTACCAGGAGCTAAC------------------------TTGATGT i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4728159 28 - 82825804 tGGAG-------------------------------------------------------------------------------------------GGTACCAGGAGCTAGC------------------------TTGATGT i chlSab2.chr23 C 0 C 0 s colAng1.NW_012115755v1 1714512 28 - 2415367 tGGAG-------------------------------------------------------------------------------------------GGTACCAGGAGCTAGC------------------------TTGATGT i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64055927 28 + 204313951 TGGAG-------------------------------------------------------------------------------------------GGTGCCAGGCGCTAGC------------------------TTGATAT i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2185204 28 + 10068113 TGGAG-------------------------------------------------------------------------------------------GGTGCTAGGTGCTAGC------------------------TTGATAT i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 40134 28 - 709587 TGGAG-------------------------------------------------------------------------------------------Ggtgccaggtgctagc------------------------ttgatat i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1141064 28 - 2246441 TGGAG-------------------------------------------------------------------------------------------Ggtgccaggtgctagc------------------------ttgatat i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 718551 28 - 940639 tggag-------------------------------------------------------------------------------------------ggtacaaggtactagc------------------------ttgatat i proCoq1.NW_012152163v1 I 47 C 0 s canFam3.chr4 37159065 143 + 88276631 tggtgttcaatttagtaacatacagaataacccccagtgcccgtcacccattcactcccaccccctgccctcctccccttctaccacccctagttcgtttcccagagttagcagtctttacgttctgtctccctttctgatat i canFam3.chr4 I 9 I 112 s dasNov3.JH562710 230999 28 - 960158 tggag-------------------------------------------------------------------------------------------ggtggcaggtgctggc------------------------ttgatac i dasNov3.JH562710 I 2 C 0 e mm10.chr13 65975039 2082 - 120421639 I e otoGar3.GL873522 1212853 0 + 48283576 C e manLeu1.NW_012103943v1 223284 310 + 2521317 M a score=683203.000000 s hg38.chr5_KI270795v1_alt 27966 72 + 131892 AAAAATGAATCAATGTTAGACCCTTTCCTCAGGACTTCTCAGTCTGGTTGGAGAGGCCAGGCATGTGTGTG--A s panTro5.chr5 5276436 72 - 181907262 AAAAATGAATCAACGTTAGACCCTTTCCTCAGGACTTCTCAGTCTGGTTGGAGAGGCCAGGCATGTGTGTG--A i panTro5.chr5 C 0 C 0 s panPan2.chr5 5538896 72 - 183735486 AAAAATGAATCAACGTTAGACCCTTTCCTCAGGACTTCTCAGTCTGGTTGGAGAGGCCAGGCATGTGTGTG--A i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1670726 72 + 3967317 aaaaatgaatcaatgttagaccctttcctcaggacttctcagtctggttggagaggccaggcatgtgtgtg--a i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4488666 72 + 163208435 aaaaatgaatcaatgttagaccctgtcctcaggacttctcagtctggttggagaggccaggcatgtgtgtg--a i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5721416 71 - 180051392 AAAAATGAATCAATGTTAGACCCTGTCCTCAGGACTTGTCAGTCTGGTTGGAGAGGCCAGGCATGGGTGTG--- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5913208 71 - 181584905 aaaaatgaatcaatgttagaccctgtcctcaggacttatcagtctggttggagaggccaggcatgGGTGTG--- i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 942271 71 - 16193990 AAAAATGAATCAATGTTACACCCTGTCCTCAGGACTTGTCAGTCTGGTTGGAGAGGCCAGGCACGGGTGTG--- i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1759318 71 - 21434487 AAAAATGAATCAATGTTAGACCCTCTCCTCAGGACTTGTCAGTCTGGTTGGAGAGGCCAGGCATGGGTGTG--- i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4728187 72 - 82825804 AAAAATGAATCAATGTTAGACCCTGTCCTCAGGACTTGTCAGTCTGGTTGGAGAGGCCAGGCATGGGTGTGA-- i chlSab2.chr23 C 0 C 0 s colAng1.NW_012115755v1 1714540 72 - 2415367 AAAAATGAATCAGTGTTAGACCCTGTCCTCAGGACTTGTCAGTCTGGTTGGAGAGGCCAGGCATGGGTGTG-A- i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64055955 69 + 204313951 AAAAATGAACCCATGTTAGACTCTGTCCTCAGGACTT---AGTCTGGTTGGAGAGACCAGGCATGGGTGTG--A i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2185232 54 + 10068113 AAAAATGAACCCATGTTAGACTCTGTTCTCAGGACTT------------------CTCAGACATGGGTGTG--A i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 40162 72 - 709587 aaaaatgaacccatgttagactctgtccttaggacttctcagtctggttggagagaccaggtatgggtgtg--a i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1141092 72 - 2246441 aaaaatgaacccatgttagactctgtcctcaggacttctcagtctggttggagagaccaggcatgggtatg--a i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 718579 72 - 940639 aaaaaggaatccattttagaccctgtcctcaggacttctcagtcgggtaggagaggtcagacgtgggtact--a i proCoq1.NW_012152163v1 C 0 C 0 s canFam3.chr4 37159320 71 + 88276631 agcaatgataccattttagacccTGTATTCAGGACTTCTTGGT-TGGGTAGAGAGGTCAGTCATGGGTGCT--C i canFam3.chr4 I 112 C 0 s dasNov3.JH562710 231027 66 - 960158 acacgtgaactggttacagaccctgctctcaggacttctcagtctgg--aggaCGGTCTGGCATGAGC------ i dasNov3.JH562710 C 0 C 0 e mm10.chr13 65975039 2082 - 120421639 I e otoGar3.GL873522 1212853 0 + 48283576 C e manLeu1.NW_012103943v1 223284 310 + 2521317 M a score=8060622.000000 s hg38.chr5_KI270795v1_alt 28038 644 + 131892 ATTACTGTAAAA----------G---------------------GCAGAAACATACCATGGAGGT-CCTGATGTGGGTGAAAGCACTTTTGGACTGGGGTGCAGGCCATGGGCCAGCTTCAGAGGAGGTGGCTTTGGAATTAGGCCTTGAAAGGTGGAAGGAGG---AGGAGGGG-AAGAGTGGGTTAGA-CTAGAGAATTCAGGCTTCTCTTGGGCCTCATATACCAATAAGTTCACAAATGAACATTGAGTCAGATTGGGTTtttattcattcagcaaatattcatcgaggatggttggaatcaggcactgagacatcgtgatggctttgaactaggccctgccctcaagtgccctgggtctaatgggacaacagccaaggaaacaagtgatggttattcagtgtgatg-aggGGCAg-t-----attgacttggagcctctcagatgtgggtgagaggcacccgagtcagactggtttaagcagaaaggaaattcacactggctcatttacctggaatatattcaagtgtggctggattcgggggtctcaaaatatgtctttaggaaactgcttg------cctctttcccctgcttttctctgtgtt-ggcttcactctttggcagattgtccctttgcagtgtcacaggtggcc---------tccggcagctcctggcttccaagtcaccagctcagg s panTro5.chr5 5276508 644 - 181907262 ATTACTGTAAAA----------G---------------------GCAGAAACAtaccatggaggt-cctgatgtgggcgaaagcacttttggactggggtgcaggccatgggccagcttcagaggaggtggctttggaattaggccttgaaaggtgggaggagg---aggagggg-aagagTGGGTTGGA-CTAGAGAATTCAGGCTTCTCTTGGGCCTCTTATACCAATAAGTTCACAAATGAACATTGAGTCAGATTGGGTTtttattcattcagcaaatattcatccaggatggttggaatcaggcactgagacatcgtgatggctttgaactaggccctgccctcaagtgccctgggtctaatgggacaacagccaaggaaacaAGTGATGGTTATTCAGTGTGATG-AGGGGCAg-t-----attgacttggagcctctcagatgtgggtgagaggcacccgagtcagactggtttaagcagagaggaaattcacactggctcatttacctggaatatattcaagtgtggctggattcgggggtctcaaaatatgtctttaggaaactgcttg------cctctttcccctgcttttctctgtgtt-ggcttcactctttggcagattgtccctttgcagtgtcacaggtggcc---------tccggcagctcctggcttccaagtcaccagctcagg i panTro5.chr5 C 0 C 0 s panPan2.chr5 5538968 644 - 183735486 ATTACTGTAAAA----------G---------------------GCAGAAACAtaccatggaggt-cctgatgtgggcgaaagcacttttggactggggtgcaggccatgggccagcttcagaggaggtggctttggaattaggccttgaaaggtgggaggagg---aggagggg-aagagTGGGTTGGA-CTAGAGAATTCAGGCTTCTCTTGGGCCTCTTATACCAATAAGTTCACAAATGAACATTGAGTCAGATTGGGTTtttattcattcagcaaatattcatccaggatggttggaatcaggcactgagacatcgtgatggctttgaactaggccctgccctcaagtgccctgggtctaatgggacaacagccaaggaaacaAGTGATGGTTATTCAGTGTGATG-AGGGGCAg-t-----attgacttggagcctctcagatgtgggtgagaggcacccgagtcagactggtttaagcagagaggaaattcacactggctcatttacctggaatatattcaagtgtggctggattcgggggtctcaaaatatgtctttaggaaactgcttg------cctctttcccctgcttttctctgtgtt-ggcttcactctttggcagattgtccctttgcagtgtcacaggtggcc---------tccggcagctcctggcttccaagtcaccagctcagg i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1670798 643 + 3967317 attaccgtaaaa----------g---------------------gcagaaacataccatggaggt-cctgatgtgggcgaaagcacttttggactggggtgcaggccatgggccagcttcagaggaggtggctttggaattaggccttgaaaggtgggaggagg---aggagggg-aagagtgggttgga-gtagagaattcaggcTTCTCTTGGGCCTCATATACCAATAAGTTCACAAATGAACATTGAGTCAGATTGGGTTTTTATTCATTCAGCAAATATTCATCCAGGATGGTTGGAATCAGGCACTGAGACATCGTGATGGCTTTGAACTAGGCCCTGCCGTCAAGTGCCCTGGGTCTAATGGGACAACAGCCAAGGAAACAAGTGATGGTTATTCAGTGTGATG-AGGGGCAg-t-----attgacttggagcctctcagatgtgggtgagaggcacccgagtcagactggtttaagcagaaaggaaattcacactggctcatttatctggaatatattcaagtgtggctggattc-ggggtctcaaaatatgtctttaggaaactgcttg------cctctttcccctgcttttctctgtgtt-ggcttcactctttggcagattgtccctttgcagtgtcacaggtggcc---------tccggaagctcctggcttccaagtcaccagctcagg i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4488738 647 + 163208435 attactgtaaaa----------g---------------------gcagaaacataccatggaggt-cctgatatgggcgaaagcacttttggactggggtgcaggccatgggccagcttcagaggaggtggctttggaattaggccttgaaaggtgggaggaggagaaggagggg-aagagTGGGTTGGA-CCAGAGAATTCAGCCTTCTCTTGGGCCTCATATACCAACAAGTTCACAAACGAACATTGAGTCAGATTGGGTTtttattcattcagcaaatattcatccagcatggttggaatcaggtgctgagacattgtggtggctttgaactaggccctgccctcaagtgccctgggtctaatgggacaatagccaaggaaacaagtgatggttattcagtgtgatg-aagggcag-t-----attgacttggagcctctcagatgtgggtgagaggcacctgagtcagactggtttaagcagaaaggaaattcacactggctcatttgcctggaatatattcaagtgtggctggattcgggggtctcaaaatatgtcttcaggaaactgcttg------cctctttcccctgcttttctctgtgtt-ggcttcactctttggcagattgtccctttgcagtgttacaggtggtc---------tccagcagctcctggcttccaagtcaccagctcagg i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5721487 656 - 180051392 ATTACGGTAAAG----------G---------------------GCAGAAACAtaccatggtggt-cctgatgtgggcaaaagcacttttggactggggtgcaggccatgggccggcttcagaggaggtggctttggaattagaccttgtaaggtgggaggaggagaaggagggg-aagagTGGGTTGGA-CCAGAGAATTCAGGCTTCTGTTGGGCCTCATATACCAACAAGTTCACAAACGAACGTTGAGTCAGATTGAGTTTTTATTCTTTCAGCAAATATTCATCCAGCATGGTTGGAATCAGGCACTGAGACATCGTGGTGGCTTTGAACTGGGCCCTGCCCTCAAGTGCCCTGGGTGTAATGGGACAACAGCCAAGGAGACAGGTGATGGTTATTCAGTGTGATG-AGGGGCAg-t-----attgacttggagcctcttagatgtgggtgagagacacccgagtcagactggcttaagcagaaaggaaattcacactggctcatttacccgaaatatattcaagtgtggctggattcgggggtctcaaaatatgtctttaggaaactccttc------cctctttcccctgcttttctctgtgtt-ggcttcactctttggcagattgtctctttgcagtgtcacaggtggcacaggtggcgtccagcagctcctggcttccaagttaccagcttagg i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5913279 656 - 181584905 ATTACGGTAAAG----------G---------------------GCAGAAACATACCATGGCGGT-CCTGATGTGGGCAAAAGCACTTTTGGACTGGGGTGCAGGCCATGGGCCGGCTTCAGAGGAGGTGGCTTTGGAATTAGACCTTGTAAGGTGggaggaggagaaggagggg-aagagTGGGTTGGA-CCAGAGAATTCAGGCTTCTGTTGGGCCTCATATACCAACAAGTTCACAAACGAACGTTGAGTCAGATTGAGTTTTTATTCTTTCAGCAAATATTCATCCAGCATGGTTGGAATCAGGCACTGAGACATCGTGGTGGCTTTGAACTGGGCCCTGCCCTCAAGTGCCCTGGGTGTAATGGGACAACAGCCAAGGAGACAGGTGATGGTTATTCAGTGTGATG-AGGGGCAg-t-----attgacttggagcctcttagatgtgggtgagagacacccgagtcagactggcttaagcagaaaggaaattcacactggctcatttacccgaaatatattcaagtgtggctggattcgggggtctcaaaatatgtctttaggaaactccttc------cctctttcccctgcttttctctgtgtt-ggcttcactctttggcagattgtctctttgcagtgtcacaggtggcacaggtggcgtccagcagctcctggcttccaagttaccagcttagg i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 942342 656 - 16193990 ATTACGGtaaag----------g---------------------gcagaaacataccatggcggt-cctgatgtgggcaaaagcacttttggactggggtgcaggccatgggccggcttcagaggaggtggctttggaattagaccttgtaaggtgggaggaggagaaggagggg-aagagTGGGTTGGA-CCAGAGAATTCAGGCTTCTGTTGGGCCTCATATACCAACAAGTTCACAAACGAACGTTGAGTCAGATTGAGTTtttattctttcagcaaatattcatccagcatggttggaatcaggcactgagacatcgtggtggttttgaactgggccctgccctcaagtgccctgggtgtaatgggacaacagccaaggagacaggtgatGGCTATTCAGTGTGATG-AGGGGCAg-t-----attgacttggagcctcttagatgtgggtgagagacacccgagtcagactggcttaagcagaaaggaaattcacactggctcatttacccgaaatatattcaagtgtggctggattcgggggtctcaaaatatgtctttaggaaactccttc------cctctttcccctgcttttctctgtgtt-ggcttcactctttggcagattgtctctttgcagtgtcacaggtggcacaggtggcgtccagcagctcctggcttccaagttaccagcttagg i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1759389 632 - 21434487 ATTACAGTAAAG----------G---------------------GCAGAAACATACCATGGCGGT-CCTGATGTGGGCAAAAGCACTTTTGGAC---------------AGGCCGGCTTCAGAGGAGGTGGCTTTGGAATTAGACCTTGTAAGGTGGGAGGAGGAGAATGAGGGG-AAGAGTGGGTTGGA-CCAGAGAATTCAGGCTTCTGTTGGGCCTCATATACCAACAAGTTCACAAACGAACGTTGAGTCAGATTGGGTTTTTATTCATTCAGCAAATATTCATCCAGCATGGTTGGAATCAGGCACTGAGACATTGTGGTGGCTTTGAACTGGGCCCTGCTCTCAAGTGCCCTGGGTGTAATGGGACAACAGCCAAGGAGACAGGTGATGGTTATTCAGTGTGATG-AGGGGCAg-t-----attgacttggagcctcttagatgtgggtgagagacacccgagtcagactggtttaagcagaaaggaaattcacactggctcatttaccggaaatatattcaagtgtggctggattcgggggtctcaaaatatgtctttaggaaactgcttc------cctctttcccctgcttttctctgtgtt-ggcttcactctttggcagagtgtctctttgcagtgtcacaggtggcc---------tccagcagctcctggcttccaagttaccagctcagg i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4728259 645 - 82825804 -TTATGGTAAAG----------G---------------------GCAGAAACATGCCATGGAGGT-CCTGATGTGGGCAAAAGCACTTTCGGACTGGGGTGCAGGCCATGGGCCGGCTTCAGAGGAGGTGGCTTTGGAATTAGGCCTTGTAAGGTGggaggaggagaaggagggg-aagagTGGGTTGGA-CCAGAGAATTCAGGCTTCTCTTGGGCCTCATATACCAACAAGTTCACAAACGAACGTTGAGTCAGATTGAGTTTTTATTCATTCAGCAAATATTCATCCAGCATGGCTGGAATCAGGCCCTGAGACATCGTGGTGGCTTTGAACTGGG-CCTGCCCTCAGGTGCCCTGGGTGTAATGGGACAACAGCCAAGGAGACAGGTGATGGTTATTCAGTGTGATG-AGGGGCAg-t-----attgacttggagcctcttagatgtgggtgagagacacccgagtcagactggtttaagcagaaaggaaattcacactggctcatttacctgaaatatattcaagtgtggctggattcgggggtctcaaaatatgtctttaggaaactgcttc------cctcgttcccctgcttttctctgtgtt-ggcttcactctttggcagattgtctctttgcagtgtcacaggtggcc---------tccaacagctcctggcttccaggttaccagctcagg i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 223596 632 + 2521317 ATTACGGTAAAG----------G---------------------GCAGAAACATACCATGGCGGT-CCTGATGTGGGCAAAAGCACTTTTGGAC---------------AGGCCGGCTTCAGAGGAGGTGGCTTTGGAATTAGACCTTGTAAGGTGGGAGGAGGAAAATGAGGGG-AAGAGTGGGTTGGA-CCAGAGAATTCAGGCTTCTGTTGGGCCTCATATACCAACAAGTTCACAAACGAACGTTGAGTCAGATTGGGTTtttattcattcagcaaatattcatccagcatggttggaatcaggcactgagacatcgtggtggctttgaactgggccctgccctcaagtgccctgggtgtaatgggacaacagccaaggagacaggtgatGGTTATTCAGTGTGATG-AGGGGCAg-t-----attgacttggagcctcttagatgtgggtgagagacacccgagtcagactggtttaagcagaaaggaaattcacactggctcatttaccggaaatatattcaagtgtggctggattcgggggtctcaaaatatgtctttaggaaactgcttc------cctctttcccctgcttttctctgtgtt-ggcttcactctttggcagagtgtctctttgcagtgtcacaggtggcc---------tccagcagctcctggcttccaagttaccagctcagg i manLeu1.NW_012103943v1 M 310 C 0 s colAng1.NW_012115755v1 1714612 648 - 2415367 ATTACTGTAAAA----------G---------------------GCAGAAACAtaccatggaggt-cctgatgtgggcaaaagcacttttggactggggtgcaggccatggaccagcttcagaggaggtggctttggaattaggccttgaaaggtgggaggaggagaaggagggg-aagagTGGGTTGGAGCCAGAGAATTCAGGCTTCTGTTGGGCCTCATATACCAACAAGTTCACAAACGAACGTTGAGTCAGATTGGGTTTTTATTCATTCAGCAAATATTCATCCAGCATGGTTGGAATCAGGCACTGAGACATCGTGGTGGCTTTGAACTGGGCCCTGCCCTCAAGTGCCCTGGGTGTAATGGGACAATAGCCAAGGAGACTGGTGATGGTTATTCGGTGTGATG-AGGGGCAg-t-----attgacttggagcctcttagatgtgggtgagagacacccgagtcagactggtttaagcagacaggaaattgacactggctcatttacctgaaatatagtcaagtgtggctggatttgggggtctcaaaatacgtctttaggaaactgcttc------cctccttcccccgcttttctctgtgtt-ggcttcactctttggcagattgtctctttgcagtgtcacaggtggcc---------tccagcagctcctggcttccaagttaccagctcagg i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64056024 644 + 204313951 ATTACTGTAAAA----------G---------------------GCAGAAACATACTATGGAGGT-CCTGATGTGGGCCAAAGCACTTTTGGATTGGGGTGCAGGCCATGGGCCAGCTTCAGAGGAGGTGGCTTTGGAATTAGGCCTTGAAAGGTGGGAGGAGAAGCAGGAGGGG-AAGAATGGGTTAGA-CCAGGTAATTCAGGCTTCTC-TGGGTCTAATCCACCAACAAGTTCACAAACAAACATTGAGTCAAACTGGG-TTTTATTTATTCAGCAAATATTCATCCAGCATGGTTGGAGTCATGCTCTGAGACATTGTGGTGGCTTTGAACTAGGCCCTGCCCTCAAGTGCCCTGGGTCTAATGGGACAACAGCCAAGGAAACAAGTGATGGTTATTTAGTGTGTTG-AGGGGTGg-t-----attgacttggagcctcttagacgtgagtgacaggcacccaaatcaga-tggtttaagcagaaaggaaattcacactggctcatttacctggaatatattcaagtatggctgggtttgggggtctcaaaatatatctttatgaaactgcttc------tctctttcccctgcttttctctgtgtt-ggcctcactctttggcagattgtccctttgcagtgtcacaggtggcc---------tccagcagctcctggcttccagattaccagctcagg i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2185286 646 + 10068113 ATTACTGTAAAA----------G---------------------GCAGAAACATACTATGGAGGCACCTGATGT-GGCCAAAGCACTTTTGGATTGGGGTGTAGGCCATGGGCCAGCTTCAGAGGACGTGGCTTTGGGATTAGGCCTTGAAAGGTGGGAGGAGAAGAAGGAGGGG-AAGAGTGGATTAGA-CCAGATAGTTCAAGCTTCTC-TGGGCCTAATATACCAACAAATTCACAAACAAACATTGAGTCAAATTGGGTTtttattcattcagcaaatattcatccagcatggttggagtcatgctctgagacatcgtggtggctttgaactaggccctgccctcaggtgccctgggtctaatgggacaacagccaaggaaacaagtgatggttattcagtgtgatg-aggGGTGg-t-----attgacttggagcctcttagacgtgagtgagaggaacccaagtcagactggtttaagcagaaagaaaattcacactggttcatttacctggaatatattcaagtatggctgggtttgggggtcgtaaaatatatctttatggaactgcttc------tctctttcccctgcttttctctgtgtt-ggcctcactctttggcagattgtccctttgcagtgtcacaggtggcc---------tccagcagctcctggcttccagattaccagctcagg i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 40234 646 - 709587 attactgtaaaa----------g---------------------gcagaaacatactacggaggt-cctgatgtgggccaaagcacttttggattggggcgcaggccatgggccagcttcagaggaggtggctttggaattaggccttgaaaggtgggaggagaagaaggagggg-aagagTGGGTTAGA-CCAGGTAATTCAGGCTTCTC-TGGGTCTAATACACCAACAAGTTCACAAACAAACATTGAGTCAAATTGGGTTtttattcattcagcaaatattcatccagcatggctggagtcatgctctgagacattgtggtggctttgaactaggtcctgccctcaagtgccctgggtctaaggggacaacagccaaggaaacaagtgatggttattcagtgtgATG-AGAGGTGG-T-----ATTGACTTGTAGCCTCTTAGACGTGagtgagaggcacccaagtcagactggtttaagcagaaaggaaattcacactggctcatttacctggaatatattcaagtatggctgggtttgggggtcacaaaatatatctttaggaaactgcttc------tctctttcccctgcttttctctgtgtt-ggcctcactctttggcagattgtccctttgcagtgtcacacgtggcc---------ttcagcagctcctggcttccagattacgagctcagg i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1141164 645 - 2246441 attactgtaaaa----------g---------------------gcagaaacatactatggaggt-cctgatgtgggccaaagcacttttggattggggtgcaggccatgggccagcttcagaggaggtggctttggaattaggccttgaaaggtgggaggagaagaaggagggg-gagagTGGGTTAGG-CCAGATAATTCAGGCTTCTC-TGGGTCTAATACACCAACAAGTTCACAAACAAACATTGAGTCAAATTGGGTTtttattcattcagcaaatattcatccagcatggttggagtcatgctctgagacattatggtggctttgaactaggccctgccctcaagtgccctgggtctaatgggacaacagccaaggaaacaagtgatggttattcagtgtgatg-ag-ggtGg-t-----attgacttggagcctcttagacgtgagtgagaggcacccaagtcagactggtttaagcagaaaggaaattcacactggctcatttaccgggaatatattcaagtatggctgggtttgggggtctcaaaatatatctttaggaaactgcttc------tctctttcccctgcttttctctgtgtt-ggcctcactctttggcagattgtccctttgcagtgtcacaggtggcc---------tccagcatctcctggcttccagattaccagctcagg i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 718651 654 - 940639 attcctgcagaatgcactacatt---------------------gcagaaacatcccacagaggt-gctaacgtgggtgagagcacttctggactggggtgtgggctgtgagccagtttcagaggaggcagctttggaattaggccttgaaagatgggtagaggaggaggaggggcaagagtgggctggg-ccagagAATTTAGGCTTCACTTGGGCCTAATACATCTCCAACTTCACAAAAGATCATTGAGTCAAGGCGGGTTtttattcattcaacaaatagtgatctacattggttggagtcaggccctgagacatagtggtggctttgacctagaccgtgccctcagatgccctgggtctaatgggacaatatccatggaaacacatgatgatactttagtgtgatg-aggGGCAGTT-----ATTGAC-TGCAGCCTCTTAGATGTGGAtgagagacactcaagtcaga-tggtttaagtagagaagaaatt--cactggctcatatacctggaatatattcaggtgtggctggatct-aggatctcgaaatgtgtccttgggaaagtgtttc------tctcttgtccctgcttttctctgtgtt-ggtatcactctttggcaggctgtccctttgtggtgttacaggtggtc---------cctgacagctcctgacctcctaaataccagctgagg i proCoq1.NW_012152163v1 C 0 I 143 s canFam3.chr4 37159391 630 + 88276631 ATTACTGCACAA----------A---------------------GTAGAAACATTCTATGGATGC-TCTGGTGTGTGCAAGAGCACTTTTGGAGTAGGATA-GGGCTGTGGGCCAGTTTCAGAAGAAACAGCCTTTGAATTAGGCCTTAAATGATGGGTGGAGGAGA-----GAG-AAGAATGGGCCCGG-CCAAAGAAGTCAGTCTTCT--TGGGCCCAATATGCCTCCAGCTTCATGAAGGAGCATTGAGCCAAGCTGGGTTtttatttattcaacaaatattcatcaggcatgcttggaatcagccactgagacacagtggtggccttgacccagtctctgccctcaAGTGACCTGGGTCTAACTAGTCAACAGCCAAGGACACTAGTGATGATAGTTCAGTGTGATG-AAGGGGTT-TTATTGACTGACtcagggcctctttggtgcatgtgagagacacttgactctaactggtttaagtagaaagacagtt--atttggctcatgtacctggaatatattca------------------ggtctcaaaacaggtccttagaaaattgtgtctccccatctcttgttcctgcttttctctgtgtt-ggcttcactctctggcaggctgtccctttgtgatgtctcaggtggcc---------cctggctgcttctgacttcccttttaccagctcaga i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 231093 626 - 960158 ACTGCCGTACAA----------GGAAGAGCATGGCTAGACAGAAGCAGAAACTTTCCGTGGGGGT-CCTGATGTGGATGAGAGCTCTTTTAGGATGGGGTGGGGGCTATTGACCTGTTTCAGATGAAGTGGCCTTTGAATTAGTCCTTGACAGATGCCTGGGGGCATCAAGAGGG-GAGGGTGGACTGGG-CCAGAGGGGTC-------------------------------------------CCTTGAGCTAATCAGCATTtttattcatgcagcacatactcatcaggcatgtttggagccaggaacagagat-tggtggtggcttggatactgtccctgccctcaagtgacttgggtcgagtggggcaacagctaaggaaacaagtgaggataattcattgtgatgtgggggcag-t-----attgACTTTGAAACTGCTATGtgcaggggggagacactccactcaggctgcccctagcagagaggaaact--cactggctcatgcccctctggtctattcaggcaccactagatc--acagtctcagtttatgtccttgggagaccatctccctccatctcttgtccatgcttttccctgtgttgggctttaccctctggcaggctgtccctttctgatgtcacaggtggct---------cccggtagct-ctggcttcca-tttcccagcgcagg i dasNov3.JH562710 C 0 C 0 e mm10.chr13 65975039 2082 - 120421639 I e otoGar3.GL873522 1212853 0 + 48283576 C a score=246000.000000 s hg38.chr5_KI270795v1_alt 28682 22 + 131892 gaaccccagcagaaggaggatg s panTro5.chr5 5277152 22 - 181907262 gaaccccagcagaaggaggatg i panTro5.chr5 C 0 C 0 s panPan2.chr5 5539612 22 - 183735486 gaaccccagcagaaggaggatg i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1671441 22 + 3967317 gaaccccagcagaaggaggatg i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4489385 22 + 163208435 gaaccccagcagaaggaggatg i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5722143 22 - 180051392 gaaccccagcagaaggaggatg i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5913935 22 - 181584905 gaaccccagcagaaggaggatg i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 942998 22 - 16193990 gaaccccagcagaaggaggctg i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1760021 22 - 21434487 gaaccccagcagaaggaggatg i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4728904 22 - 82825804 gaaccccagcagaaggaggatg i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 224228 21 + 2521317 gaaccccagc-gaaggaggatg i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1715260 22 - 2415367 gaaccccagcagaaggaggatg i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64056668 22 + 204313951 gaaccccagcagaaggaggaaa i calJac3.chr2 C 0 I 303 s saiBol1.JH378186 2185932 22 + 10068113 gaaccccagcagaaggaggaag i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 40880 22 - 709587 gaaccccagcagaaggaggaag i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1141809 22 - 2246441 gaaccccagcagaagggggaag i aotNan1.NW_018501968v1 C 0 C 0 s canFam3.chr4 37160021 21 + 88276631 -aatcctagtagaaagagggtg i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 231719 20 - 960158 -gacccctgtcggatgtggtg- i dasNov3.JH562710 C 0 C 0 e mm10.chr13 65975039 2082 - 120421639 I e otoGar3.GL873522 1212853 0 + 48283576 C e proCoq1.NW_012152163v1 719305 143 - 940639 I a score=1244312.000000 s hg38.chr5_KI270795v1_alt 28704 119 + 131892 cctcttgatcagtagtttcCTCTGGAGTTGTGGAATTGAATATCACAGGACACTGTCAGTCATATGC------------ATCCACCATGGCTGCAGggattgcctgcccacccctgcgaggagtacagaga s panTro5.chr5 5277174 119 - 181907262 cctcttgatcagtagtttcCTCTGGAGTTGTGGAATTGAATATCACAGGACACTGTCAGTCATATGC------------ATCCACCATGGCTGCAGggattgcctgcccacccctgcgaggagtacagaga i panTro5.chr5 C 0 C 0 s panPan2.chr5 5539634 119 - 183735486 cctcttgatcagtagtttcCTCTGGAGTTGTGGAATTGAATATCACAGGACACTGTCAGTCATATGC------------ATCCACCATGGCTGCAGggattgcctgcccacccctgcgaggagtacagaga i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1671463 119 + 3967317 cctcttgatcagtagtttcCTCTGGAGTTGTGGAATTGAATATCACAGGACACTATCAGTCATATGC------------ATCCACCATGGCTGCAGggattgcctgcccacccctgcgaggagtacagaga i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4489407 119 + 163208435 cctcttgatcagtagtttcCTCTGGCGTTGTGGAATTGAATATCATAGGACATTGTCAGTCATATGC------------ATCCACCATGGCTGCAGggattgcctgcccacccctgcgaggagtacagaga i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5722165 119 - 180051392 cctcttgatcagtagtttactctggcgttgtggaattgagtatcataggacattgtcagtcatatgc------------attcactgtggctgcagggattgcctgcccacccctgtgaggagcacagaga i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5913957 119 - 181584905 cctcttgatcagtagttTACTCTGGCGTTGTGGAATTGAGTATCATAGGACATTGTCAGTCATATGC------------ATTCACCGTGGCTGCAGggattgcctgcccacccctgtgaggagcacagaga i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 943020 119 - 16193990 cctcttgatcagtagtttactctggcgttgtggaattgagtgtcataggacattgtcagtcatatgc------------attcaccgtggctgcagggattgcctgcccacccctgcgaggagcacagaga i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1760043 119 - 21434487 cctcttgatcagtagttTACTCTGGCGTTGTGGAATTGAGTATCATAGGACATTGTCAGTCATATGC------------ATTCACCGTGGCTGCAGggattgcctgcccgcccctgcgaggagcacagaga i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4728926 119 - 82825804 cctcctgatcagtagttTACTCTGGCGTTGTGGAATTGAGTATCATAGGACATTGTCAGTCATATGC------------ATTCACCATGGCTGCAGggattgcctgcccacccctgcgaggagtacaggga i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 224249 119 + 2521317 cctcttgatcagtggtttactctggcgttgtggaattgagtgtcataggacattgtcagtcatgtgc------------attcactgtggctgcagggattgcctgcccacccctgcgaggagcacagaga i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1715282 119 - 2415367 cctcttgatcagtagttTACTCTGGCGTTGTGGAATTGAGTATCACAGGACATGGTCAGTCATATGC------------ATTCACCATGGCTGCAGggattgcctgcccacccctgcgaggagtacagaga i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64056993 117 + 204313951 cctcttgattagtagtttactctggtgttgtggaattgagtctcatcagacattgtcaatcatatgc------------attcaccatggctg-ggggatcgcctgctc-cccctgtgaggagtatagaga i calJac3.chr2 I 303 C 0 s saiBol1.JH378186 2185954 118 + 10068113 cctctTGATTAGTAGTTTACTGTGGTGTTGTGGAATTGAGTCTCATCAGACATTGTCAATCACATGC------------attcaccatggctg-ggggatcgcctgctcacccctgtgaggagtacagaga i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 40902 118 - 709587 cctctTGATTAGTAGTTTACTGTGGTGTTGTGGAATTGAGTCTCATCAGACATTGTCAATCACGTGC------------attcaccatggctg-ggggatcgcctgctcacccctgtgaggagtacagaga i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1141831 118 - 2246441 cctctTGATTAGTAGTTTACTCTGGTGTTGTGGAATTGAGTCTCATCAGACATTGTCAGTCACATGC------------attcaccatggctg-ggggatcgcctgctcacccctgtgaggagtacagaga i aotNan1.NW_018501968v1 C 0 C 0 s canFam3.chr4 37160042 118 + 88276631 cctctttctcaatgatgtgctctaatgtcctgggacttagtctcactggacatctttggtcacatgc------------attcattggaacgaaggggatcatctgccca-ccctgcatggggttgggaaa i canFam3.chr4 C 0 I 1 s dasNov3.JH562710 231739 104 - 960158 ccattttctcagtggttttc-------ttgtg----------------gacatctttggtcacattcctgtccctgaaagttcactatggcca-ggggatgatctgcctatccctgcagatgataagg--- i dasNov3.JH562710 C 0 C 0 e mm10.chr13 65975039 2082 - 120421639 I e otoGar3.GL873522 1212853 0 + 48283576 C e proCoq1.NW_012152163v1 719305 143 - 940639 I a score=3634877.000000 s hg38.chr5_KI270795v1_alt 28823 295 + 131892 tacagggcatattagttttgcccaaatcacatgagctga---ggtg---ggtggtggggggagggaactgttatttcacaaagaaaattcagatgctgtcacca----------------------ggca----------------------aaacccacagatgtccactacaGCTACCACCATGGAACAGAATAATTCACCCATTA--agca-cctggcttgggactccagttcccagggatggaatcccagctccaccatttacaagttgtgtgactgtggctgggtcacttcacctgtcagcctgagtctcagtgt-c-ccatctgcacaataggagtgatgg------ccc------ s panTro5.chr5 5277293 295 - 181907262 tacagggcatattagttttgcccaactcacatgagctga---ggtg---ggtggtggggggagggaactgttatttcacaaagaaaattcagatgctgtcacca----------------------ggca----------------------aaacccacagatgtccactacaGCTACCACCATGGAACAGAATAATTCACCCATTA--agca-cctggcttgggactccagttcccagggatggaatcccagctccaccatttacaagttgtgtgactgtggctgggtcacttcacctgtcagcctgagtctcagtgt-c-ccatctgcacaataggagtgatgg------ccc------ i panTro5.chr5 C 0 C 0 s panPan2.chr5 5539753 295 - 183735486 tacagggcatattagttttgcccaactcacatgagctga---ggtg---ggtggtggggggagggaactgttatttcacaaagaaaattcagatgctgtcacca----------------------ggca----------------------aaacccacagatgtccactacaGCTACCACCATGGAACAGAATAATTCACCCATTA--agca-cctggcttgggactccagttcccagggatggaatcccagctccaccatttacaagttgtgtgactgtggctgggtcacttcacctgtcagcctgagtctcagtgt-c-ccatctgcacaataggagtgatgg------ccc------ i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1671582 295 + 3967317 tacagggcatattagttttgcccaaatcacatgagctga---ggtg---ggtggtggggggagggaactgctatttcacaaagaaaattcagatgctatcacca----------------------ggca----------------------aaacccacagatgtccactgcaGCTACCACCATGGAACAGAATAATTCACCCATTA--agca-cctggcttgggactccagttcccagggatggaatcccagctccaccatttacaagttgtgtgactgtggctgggtcacttcacctgtcagcctgagtctcggtgt-c-ccatctgcacaataggagtgatgg------ccc------ i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4489526 295 + 163208435 tacagggcatattagttttgcccaaatcacatgagctga---ggtg---ggtggtagggggagggaactgttatttcacaaagaaaattcagatgctgtcacca----------------------ggca----------------------aaacccacagatgtccactacaGCTACCACCATGGAACAGAATAATTCACCCATTA--agca-cctggcttgggactccagttcccagggatggaatctcagctccaccatttacaagttgtgtgaccgtggctgggtcacttcacctgtcagcctgagtctcagtgt-c-ccgtctgcacaataggagtgatgg------ccc------ i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5722284 292 - 180051392 tacagggcatattagttttgcccaaatcacatgggctga---ggtg---ggtggtggggggaggaaactgttatttcacaaagaaaattcagatgctgtcacca----------------------ggca----------------------aaacccacaaatgtccactacaGCTACTGCCATGGAACAGAATAATTCA-CCAtta--agca-cctggcttaggaccccagttcccagggatggaatctcaactccaccatttgtaagttgtgtgaccgtggctgggtcacttcaccagtcagcctgagtct--gtgt-c-ccatctgcacaaagggagtgatgg------ccc------ i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5914076 294 - 181584905 tacagggcatattagttttgcccaaatcacatgggctga---ggtg---ggtggtggggggaggaaactgttatttcacaaagaaaattcagatgctgtcacca----------------------ggca----------------------aaacccacaaatgtccactacaGCTACTGCCATGGAACAGAATAATTCA-CCAtta--agca-cctggcttaggaccccagttcccagggatggaatctcaactccaccatttacaagttgtgtgaccgtggctgggtcacttcaccagtcagcctgagtctcagtgt-c-ccatctgcacaaagggagtgatgg------ccc------ i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 943139 293 - 16193990 tacagggcatattagttttgcccaaatcacatgggctga---ggtg---ggtggtggggggaggaaactgttatttcacaaagaaaattcagatgctgtcacca----------------------ggca----------------------aaacccacaaatgtccactacaGCTACTGCCATGGAACAGAATAATTCA-CCAtta--agca-cctggcttaggaccccagttcccagggatggaatctcaactccaccatttgtaagttgtgtgaccgtggctgggtcacttcaccagtcagcctgagtctcagtgt-c-ccatctgcacaaagggagtgatGG-------CC------ i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1760162 295 - 21434487 tacagggcatattagttttgcccaaatcacatgggctga---ggtg---ggtggtggggggaggaaactgttatttcacaaagaaaattcagatgctgtcacca----------------------ggca----------------------aaacccacagatgtccactacaGCTACCGCCATGGAACAGAATAATTCACCCATTA--agca-cctggcttaggactccagttcccagggatggaatctcaactccaccatttacaagttgtgtgaccgtggctgggtcacttcaccagtcagcctgagtctcagtgt-c-ccatctgcacaaagggagtgatgg------ccc------ i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4729045 295 - 82825804 tacagggcatattagttttgcccaaatcacatgggctga---ggtg---ggtggtgggggaagggaactgttacttcacaaagaaaattcagatgctgtcacca----------------------ggca----------------------aaacccacagatgtccactacaGCTACCGCCATGGAACAGAATAATTCACCCAtta--agca-cctggcttaggaccccagttcccagggatggaatctcaactacaccatttacaagttgtgtggccgtggctgggtcacttcaccagtcagcctgagtctcagtgt-c-ccatctgcacaaaaggagtgatgg------ccc------ i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 224368 295 + 2521317 tacagggcatattagttttgcccaaatcacatgggctga---ggtc---ggtggtggggggaggaaactgttatttcacaaagaaaattcagatgctgtcacca----------------------ggca----------------------aaacccacagatgtccactacaGCTACCACCATGGAACAGAATAATTCACCCAtta--agca-cctggcttaggaccccagttcccagggatggaatctcaactccaccatttacaagttgtgtgacggtggctgggtcacttcaccagtcagcccgagtctcagtgt-c-ccatctgcacaaagggagtgatgg------ccc------ i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1715401 295 - 2415367 tacagggcatattagttttgcccaaatcacatgggctga---ggtg---ggtggtcgggggagggaactgttatttcacaaagaaaattcaggtgctgtcacca----------------------ggca----------------------aaacccacagatgtccactacaGCTACCGCCATGGAACAGAATAATTCACCCAtta--agca-cctggcttatgaccccagttcccagggatggaatctcaactccaccatttacaagttgtgtgaccgtggctgggtcacttcaccagtcagcctgagtctccgtgt-c-ccatctgcacaaagggagtgatgg------ccc------ i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64057110 294 + 204313951 tacagggcacattagttttgcccaaatcacatggactga---ggta---ggcggtggggggagggaaatgttatttcccaaagaaaattcagatgctgtcacca----------------------ggca----------------------aaacccacagatgtccaccacaGCTACCACCATGGAACAGAATAATTCACCCATTA--AGTA-CCTggcttgggactccagcttccagggatggaatcttagccccaccatttataag-tgtgtgaccatggctgtgtcacttcactggtcagccagagtctcagtgt-c-ctatctgcaaaatgggagtgatgg------ccc------ i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2186072 294 + 10068113 tacagggcacattagttttgcccaaatcacatggactga---ggta---ggtggtagggggagggaaatgttatttcccagagaaaattcagatgctgtcacca----------------------ggca----------------------aaatccacagatgtccaccacaGCTACCACCATGGAACAGAATAATTCACCCAATA--agca-cctggcttgggactccagtttccagggatggaatctcagctccaccatttataag-tgtgtgaccatggctgtgtcactttaccggtcagcctgagtctcagtgt-c-ctatctgcaaaatgggagtgatgg------ccc------ i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 41020 295 - 709587 tacagggcacattagttttgcccaaatcacatggactga---ggta---ggtggtagggggagggaaatgttatttcccaaagaaaattcagatgctgtcacca----------------------ggca----------------------aaacccacagatgtccaccacaGCTACCACCATGGAACAGAATAATTCACCTATTA--agca-cctggcttgggactccagtttccagggatggaatctcagctccaccatttataagttgtgtgaccgtggctgtgtcacttcactggtcagcctgagtctcagtgt-c-ctatctgcaaaatgggagtgataG------CCC------ i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1141949 294 - 2246441 tacagggtacattagttttgcccaaatcacatgggctga---ggta---ggtggtggggggagggaaatgttatttcccaaagaaaattcagatgctgtcacca----------------------ggca----------------------aaacccacagatgtccaccacaACTACCACCATGGAACAGAATAATTCACCCGGTA--agca-cctggcttgggactccagtttccagggatggaatctcagctccaccatttataag-tgtgtgaccatggctctgtcacttcaccggtcagccagagtctcagtgt-c-ctatctgcaaaatgggagtgatgg------ccc------ i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 719448 322 - 940639 tacagggcatattagttctgcccaaactgcgtggactga---ggtggcaggtggtagggaaaaggaaatgtgattccctgaagaaaattcagatgctgttacca----------------------gacgtaggtagaatggatattgaggtaaaaccatggatgtccactacaGCTACCACATTGGAacagaataatttggcaattaacagc--cctgacttggaactccagttcccagggatggaatctcagttccaccatttacaaattgtgtgaccatggctgggtcacttcccctgtcagcctgagtgtcaatgtcc-ccatttccaaaatgggAGAGATGG------TCC------ i proCoq1.NW_012152163v1 I 143 C 0 s canFam3.chr4 37160161 287 + 88276631 tacagggtata-tagtttggcccaaataacatggattgagttggta---gctggtggggtgtggg---tgtgaatttccaaagaaaattcagatgctgttccta----------------------ggggtaggtagaatgcatgtttaggcaaaatcacagatgtccattccaGCTGCCACATGGGAATAGATTGATACACTAGTGA--A------------------------------GAGGgaatgccagagtcaccatttacaagccgtgtgaccgtggctggctcac-tcacctgttagtctgagtctcagtgttc-ccatctatgaaatgggagtgatGG------GTC------ i canFam3.chr4 I 1 I 1 s dasNov3.JH562710 231843 313 - 960158 ---ggggaacat-------------atcacatggactga---cgtgac-gcaagtagggtgggtggcttg--attccctaaagaaaatacaggtgctatcaccagaggccagtagaatgatatgttggca----------------------gaacccacaggtgctcactaTGGC-ACCACATGGGAGCAGAATAATTATCCAGCTa--aaagtcctagctggggactccagttcttggtgatggaatctcattttcaccatttacaagttgtgagactttgactgggtcaattctcc-gtatgtttgagccatgatat-ctccatctacaaaatgggagtgataagcgtatccctctcca i dasNov3.JH562710 C 0 C 0 e mm10.chr13 65975039 2082 - 120421639 I e otoGar3.GL873522 1212853 0 + 48283576 C a score=27264.000000 s hg38.chr5_KI270795v1_alt 29118 2 + 131892 ac s panTro5.chr5 5277588 2 - 181907262 ac i panTro5.chr5 C 0 C 0 s panPan2.chr5 5540048 2 - 183735486 ac i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1671877 2 + 3967317 ac i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4489821 2 + 163208435 ac i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5722576 2 - 180051392 ac i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5914370 2 - 181584905 ac i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 943432 2 - 16193990 AC i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1760457 2 - 21434487 ac i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4729340 2 - 82825804 ac i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 224663 2 + 2521317 ac i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1715696 2 - 2415367 ac i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64057404 2 + 204313951 ac i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2186366 2 + 10068113 ac i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 41315 2 - 709587 AT i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1142243 2 - 2246441 ac i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 719770 2 - 940639 AC i proCoq1.NW_012152163v1 C 0 C 0 s otoGar3.GL873522 1212853 2 + 48283576 AT i otoGar3.GL873522 C 0 C 0 s canFam3.chr4 37160449 2 + 88276631 AC i canFam3.chr4 I 1 C 0 s dasNov3.JH562710 232156 2 - 960158 gt i dasNov3.JH562710 C 0 C 0 e mm10.chr13 65975039 2082 - 120421639 I a score=6019119.000000 s hg38.chr5_KI270795v1_alt 29120 497 + 131892 actgccAGCTTGAATC-AACGTGAAAGCACCTTGCAAAGAGTCCAGGCAGGCTCAGGCAGGCGGCACTGCAGTTTGGGGTGGCATGAACTATGATGTCTCTGGCATGTTATC-----------------------------CGACCAGTTCCAGGGCAGCTGTC-----TGCAG--A-AAGCAGCCGGTCGTAGCACAAAgagtcaggctgtcctgggttcaaagcctgaacctccca-----------------------ctt--------acaagc-----------------tacatgTTC---------------------------------------C---TTC-----A--TGATAATCACCTTTCCTGCC-TCCCAG---GGTTGTTGGAAGTGTCAAGGGGAC-ATGTAGACA---G-CCT--------------------GGCACA-CTTTGTTC-TGGGAGTGGTGATAGCTG-TGTTCATAGTACAATTGCTACTCCACAGCATGCCAGGAGTCCAGGTGTGAATCTAACGGGACAGACCCCATACTCTGTGAACAAAAGCCCATCTTTCTGGATAAAGGGTACATTTGGCCAGCAGCCAAGGGCCC-----TGGGAAGGCTTTGTGCAGCCCGGCCCTTCCCTCCTTCCATTCAGC s panTro5.chr5 5277590 497 - 181907262 actgccAGCTTGAATC-AACGTGAAAGCACCTTGCAAAGAGTCCAGGCAGGCTCAGGCAGGCGGCACTGCAGTTTGGGGTGGCATGAACTATGATGTCTCTGGCATGTTATC-----------------------------CGACCAGTTCCAGGGCAGCTGTC-----TGCAG--A-AAGCAGCCGGTCGTAGCACAAAgagtcaggctgtcctgggttcaaagcctgaacctccca-----------------------ctt--------acgagc-----------------tacgtgTTC---------------------------------------C---TTC-----A--TGATGATCACCTTTCCTGCC-TCCCAG---GGTTGTTGGAAGTGTCAAGGGGAC-ATGTAGACA---G-CCT--------------------GGCACA-CTTTGTTC-TGGGAGTGGTGATAGCTG-TGTTCATAGTACAATTGCTACTCCACAGCATGCCAGGAGTCCAGGTGTGAATCTAACGGGACAGACCCCATACTCTGTGAACAAAAGCCCATCTTTCTGGATAAAGGGTACATTTGGCCAGCAGCCAAGGGCCC-----TGGGAAGGCTTTGTGCAGCCCGGCCCTTCCCTCCTTCCATTCAGC i panTro5.chr5 C 0 C 0 s panPan2.chr5 5540050 497 - 183735486 actgccAGCTTGAATC-AACGTGAAAGCACCTTGCAAAGAGTCCAGGCAGGCTCAGGCAGGCGGCACTGCAGTTTGGGGTGGCATGAACTATGATGTCTCTGGCATGTTATC-----------------------------CGACCAGTTCCAGGGCAGCTGTC-----TGCAG--A-AAGCAGCCGGTCGTAGCACAAAgagtcaggctgtcctgggttcaaagcctgaacctccca-----------------------ctt--------acgagc-----------------tacatgTTC---------------------------------------C---TTC-----A--TGATGATCACCTTTCCTGCC-TCCCAG---GGTTGTTGGAAGTGTCAAGGGGAC-ATGTAGACA---G-CCT--------------------GGCACA-CTTTGTTC-TGGGAGTGGTGATAGCTG-TGTTCATAGTACAATTGCTACTCCACAGCATGCCAGGAGTCCAGGTGTGAATCTAACGGGACAGACCCCATACTCTGTGAACAAAAGCCCATCTTTCTGGATAAAGGGTACATTTGGCCAGCAGCCAAGGGCCC-----TGGGAAGGCTTTGTGCAGCCCGGCCCTTCCCTCCTTCCATTCAGC i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1671879 497 + 3967317 actgccAGCTTGAATC-AACGTGAAAGCACCTTGCAAAGAGTCCAGGCAGGCTCGGGCAGGCGGCACTGCAGTTTGGGGTGGCACGAACTATGATGTCTCTGGCATGTTATC-----------------------------CGACCAGTTCCAGGGCAGCTGTC-----TGCAG--A-AAGCAGCCGGTCGTAGCACAAAgagtcaggctgtcctgggttcaaagcctgaacctccca-----------------------ctt--------acgagc-----------------tacatgTTC---------------------------------------C---TTC-----A--TGATGATCACCTTTCCTGCC-TCCCAG---GGTTGTTGGAAGTGTCAAGGGGAC-ATGTAGACA---G-CCT--------------------GGCACA-CTTTGTTT-TGGGAATGGTGATAGCTG-TGTTCATAGTACAATTGCTACTCCACAGCATGCCAGGAGTCCAGGTGTGAATCTAATGGGGCAGACCCCATACTCTGTGAACAAAAGCCCATCTTTCTGGATAAAGGGTGCATTTGGCTAGCAGCCAAGGGCCC-----TGGGAAGGCTTTGTGCAGCCCGGCCCTTCCCTCCTTCCATTCAGC i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4489823 497 + 163208435 attgccagcttgAATC-CACATGAAAGCACCTTGCAAAGAGTCCAAGCAGGCTCAGGCAGGCAGCGCTGCAGTTTGGGGTGGCGTGAACTATGATGTCTCTGGCGTGTTATC-----------------------------TGACCAGTTCCAGGGCAGCTGTC-----TGCAG--A-GAGCAGCCGGTCGTagcacaaagagtcaggctgtcctgggttcaaagcctgaacctccca-----------------------ctt--------acgagc-----------------tACACGTTC---------------------------------------C---TTC-----A--TGATGACCACCTTTCCTGTC-TCCCAG---GGTTGTTGGAAGTGTCAAGGGGAC-ATGTAGACA---G-CCT--------------------GGCACA-CTTTGTTC-TGTGAGTGGTGATAGCTG-TGTTCATAGTACAATTGCTACTCCACAGCATGCCAGGAGTCCAGGTGTGAATCTAACGGGACAGACCCCATACTCTGTGAACAAAAGCCCATCTTTCTGGATAAAGGGTGCATTTGGCCAGCAGCCAAGGGCCC-----TGGGAAGGCTTTGTGCAGCCCGGCCCTTCCCTCCTTCCATTCAGC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5722578 493 - 180051392 atcgcCAGCTTCAATC-ACCATGAAAGCACCTTGCAGAGAGTCCAAGCAGGCTCAGGCAGGTGGCGCTGCAGTTTGGTGTGGCATGAACTATGTCGTCTCTGGCCTGTTATC-----------------------------CAGCCAGTTCCAGGGCAGCTGTC-----TGCAG--A-GAGCAGCCGGATGTAGCACAAAgagccaggctgtcctgggttcaaagcctgaacctccca-----------------------ctt--------aggagc-----------------tACACGTTC---------------------------------------CTCCTCC-----A--TGATGATCACCTTTCCTGCC-TCCCAG---GGTAGTTGGAAGTGTCAAGGGGAC-ATGTAGACA---G-CCT--------------------GGTACA-C--TGTTC-TGTGAGTGGTGATAGCTG-TGTTCATAGTACA---GTTACTCCACAGCACGCCAGGAGTCCAGATGTGAATCGAACAGGACAGACCCCGTACTC--TGAACAAAAGCCCATCTTTCCGGGTAAAGGGTGCATTTGGCCAGCAGCCAAGGGCCC-----CGGGAAGGCTTTGTGCAGCCTGGCCCTTCCCTCCTTCAGTTCAGC i rheMac8.chr6 C 0 I 5988 s macFas5.chr6 5914372 493 - 181584905 atcgcCAGCTTCAATC-ACCATGAAAGCACCTTGCAGAGAGTCCAAGCAGGCTCAGGCATGTGGCGCTGCAGTTTGGTGTGGCATGAACTATGTCGTCTCTGGCCTGTTATC-----------------------------CAGCCAGTTCCAGGGCAGCTGTC-----TGCAG--A-GAGCAGCCGGATGTAGCACAAAgagccaggctgtcctgggttcaaagcctgaacctccca-----------------------ctt--------aggagc-----------------tACACGTTC---------------------------------------CTCCTCC-----A--TGATGATCACCTTTCCTGCC-TCCCAG---GGTAGTTGGAAGTGTCAAGGGGAC-ATGTAGACA---G-CCT--------------------GGTACA-C--TGTTC-TGTGAGTGGTGATAGCTG-TGTTCATAGTACA---GTTACTCCACAGCACGCCAGGAGTCCAGATGTGAATCGAACAGGACAGACCCCGTACTC--TGAACAAAAGCCCATCTTTCCGGGTAAAGGGTGCATTTGGCCAGCAGCCAAGGGCCC-----CGGGAAGGCTTTGTGCAGCCTGGCCCTTCCCTCCTTCAGTTCAGC i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 943434 495 - 16193990 ATCGCCAGCTTCAATC-ACCATGAACGCACCTTGCAGAGAGTCCAAGCAGGCTCAGGCAGGTGGCGCTGCAGTTTGGTGTGGCATGAACTATGTCGTCTCTGGCCTGTTATC-----------------------------CAGCCAGTTCCAGGGCAGCTGTC-----TGcag--a-gagcagccggatgtagcacaaagagccaggctgtcctgggttcaaagcctgaacctccca-----------------------ctt--------aggagc-----------------tACACGTTC---------------------------------------CTCCTCC-----A--TGATGATCACCTTTCCTGCC-TCCCGG---GGTAGTTGGAAGTGTCAAGGGGAC-ATGTAGACA---G-CCT--------------------GGTACA-C--TGTTC-TGTGAGTGGTGATAGCTG-TGTTCATAGTATA---GTTACTCCACAGCACGCCAGGAGTCCAGATGTGAATCGAACAGGACAGACCCCGTACTCTGTGAACAAAAGCCCATCTTTCCGGGTAAAGGGTGCATTTGGCCAGCAGCCAAGGGCCC-----CGGGAAGGCTTTGTGCAGCCTGGCCCTTCCCTCCTTCAGTTCAGC i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1760459 492 - 21434487 atcgccagcttgAATC-ACCGTGAAAGCACCTTGCAAAGAGTCCAAGCAGGCTCAGGCAGGTGGCGCTGCAGTTTGGTGTGGCATGAACTAT---GTCTCTGGCCTGTTATC-----------------------------CAGCCAGTTCCAGGACAGCTGTC-----TGCAG--A-GAGCAGCCGGATGTAGCACAAAgagccaggctgtcctgggttcaaagcctgaacctccca-----------------------ctt--------aggagc-----------------tACACGTTC---------------------------------------CTCCTCC-----A--TGATGATCACCTTTCCTGCC-TCCCAG---GGTAGTTGGAAGTGTCAAGGGGAC-ATGTAGACA---G-CCT--------------------GGTACA-C--TGTTC-TGTGAGTGGTGATAGCTG-TGTTCATAGTACA---GTTACTCCACAGCACGCCAGGAGTCCGGATGTGAATCGAACAGGAAAGACCCCGTACTCTGTGAACAAAAGCCCATCTTTCTGGGTAAAGGGTACATTTGGCCAGCAGCCAAGGGCCC-----TGGGAAGGCTTTGTGCAGCCCGGCCCTTCCCTCCTTCAGTTCAGC i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4729342 497 - 82825804 atcgcCAGCTTCAGTC-GCCGTGAAAGCACCTTGCAAAGAGTCCAAGCAGGCTCAGGCAGGTGGCGCTGCAGTTTGGTGTGGCATGAACTAT---ATCTCTGGCATGTTATC-----------------------------CAGCCAGTTCCAGGGCAGCTGTC-----TGTGG--A-GAGCAGCCGGATGTAGCACAAAgagccaggctgtcctgggttcaaagcctgaacctccca-----------------------ctt--------aggagc-----------------tACACGTTC---------------------------------------CTCCTCC-----A--TGATGATCACCTTTCCTGCC-TCCCAG---GGTTGTTGGAAGTGTCAAGGGGAC-ATGTAGACA---G-CCT--------------------GGTACA-CTGTGTTC-TGTGAGTGGTGATAGCTG-TGTTCATAGTACAGTTGTTACTCCACAGCATGCCAGGAGTCCAGATGTGAATGGAACAGGACAGACCCCGTACTCTGTGAACAAAAGCCCATCTTTCTGGGTAAAGGGTGCATTTGGCCAGCAGCCAAGGGCCC-----TGGGAAGTCTTTGTGCAGCCCGGCCCTTCCCTCCTTCAGTTCAGC i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 224665 492 + 2521317 atcgcCAGCTTCAATC-ACCGTGGAAGCACCTTGCAGAGAGTCCAAGCAGGCTCAGGCAGGTGGCGCTGCAGTTTGGTGTGGCATGAACTAT---GTCTCTGGCCTGTTATC-----------------------------CAGCCAGTTCCAGGGCAGCTGTC-----TGCAG--A-GAGCAGCCGGATGTAGCACAAAgagccaggctgtcctgggttcaaagcctgaacctccca-----------------------ctt--------aggagc-----------------tACACGTTC---------------------------------------CTCCTCC-----A--TGATGATCACCTTTCCTGCC-TCCCAG---GGTAGTTGGAAGTGTCAAGGGGAC-ATGTAGACA---G-CCT--------------------GGTACA-C--TGTTC-TGTGAGTGGTGATAGCTG-TGTTCATAGTACA---GTTACTCCACAGCATGCCAGGAGTCCGGATGTGAATCGAACAGGACAGACCCCGTACTCTGTGAACAAAAGCCCATCTTTCTGGCTAAAGGGTACATTTGGCCAGCAGCCAAGGGCCC-----TGGGAAGGCTTTGTGCAGCCCGGCCCTTCCCTCCTTCAGTTCAGC i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1715698 520 - 2415367 atcgctagcttgAATC-ACCATGAAAGCACCTTGCAAAGAGTCCAAGCAGGCTCAGGCAGGTGGCGCTGCAGTTTGGTGCGGCGTGAACTATGATGTCTCTGGCGTGTTATC-----------------------------CAGCCAGTTCCAGGGCAGCTGTC-----TGCAG--A-GAGCAGCCAGATGTAGCACAAAGAGCCAGGCTGTCCTGGGTTCAAAGGCTGAACCTCCCA-----------------------CTT--------GGGAGC-----------------TACACGTTC---------------------------------------CTCTTCC-----A--TGATGATCACCTGTCCTGCC-TCCCAG---GGTTGTTAGAAGTGTCAAGGGGAC-ATGTAGACA---G-CCTACATGTCAAGGGGACATGTAGACACA-CTTTGGTC-TGTGAGTGGTGATAGCTG-TGTTCATAGTACAGTTGTTACTCCACGGCACGCCAGGAGTCCAGATGTGAATCGAACAGGACAGACCCCATACTCTGTGAACGAAAGCCCATCTTTCTGGGTAAAGGGTGCATTTGGCCAGCAGCCAAGGGCCC-----TGGAAAGGCTTTGTGCAGCCCAGCGCTTCCCTACTTCAGTTCAGC i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64057406 497 + 204313951 attgcctgcttGAATC-AATGTGAAAGCGCCTTGCAAAGGGACCAAGCAGGCTCAGGCAGGTAGTGTTGCAGTTTGGTGCAGCATGAACTGTGATGACTCTGGCCTGTTATC-----------------------------CGACCAGTTCTGGGGCAGCTGTC-----TGcag--a-gagcagctgggcatagcagaaagagccaggctgtcctgggttcaaagcctgaaccttcta-----------------------ctt--------ataagc-----------------tACACATTC---------------------------------------C---TTC-----A--TGACGATCACCTTTCCTGCC-TCCCAG---GGTTGTTGGAAGTGACGAGGGGAC-ATGTAGACA---G-CCT--------------------GGCACGTTGTCAATC-TGTGAGTGGTGATAGCTG-TGTTCGTAGCACGATCGGTACTCCACAGTGTGTCAGGAGTCTAGGTGCGAATCTAACAGGACAGACCCCATGCCCTGTGAACAGAAGCCCATCTTTCTGGTTAAAGGATGC-TTTGGCAAGCAGCCAAGGGCCC-----TGGGAAGGCTTTGTGCAGCCCGGCCCTTCCCTCCTTCCATTCAAC i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2186368 494 + 10068113 actgcccgcttGAATC-AACGTGAAAGCACCTTGCAAAGGGACCAAGCAGGCTCAGGCAGGCAGTGCTGCAGTTTGGTGCGGCATGAACTATGATGACTCTGGCGTGTGATC-----------------------------TGACCAGTTCCGGGGCAGCTGTC-----TGCAG--A-GAGCAGCCGGGCATAGCAGAAAgagccaggctgtcttgggttcaaagcctgaacctccta-----------------------ctt--------atgagc-----------------tTCACATTC---------------------------------------C---TTC-----A--TGACAATCACTTTTCCCGCC-TCCCA----GGTTGTTGGAAGTGTCGAGGGGAC-ATGTAGACA---G-CCT--------------------GGCACG-TGTCGGTC-TGTGAGTGGTGATAGCTG-TGTTCATAGTACAATCGGTACTCCACAGTGTGTCAGGAGTCTAGGTGCGAATCTAACAGGACAGACCCCATGCTC--TGAACAACAGCCCATCTTTCTGGTTAAAGGGTACATGTGGCAAACAGCCAAGAGCCC-----AGGGAAGGCTTTGTGCAGCCCGGCCCCTCCCTCCTTCCATTCACC i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 41317 496 - 709587 ATTG-CTGCTTGAATC-AACATGAAAGCACCTTGCAAAGGGACCAAGCAGGCTCAGGCAGGCAGTGCTGCAGTTTGGTGTGGCATGAACTGTGATGACTCTGGCATGTTATC-----------------------------TGACCAGTTCCAGGGCAGCTGTC-----TGcag--a-gagcagccgggcatagcagaaagagccaggctgtcctgggttcaaagcctgaacctccta-----------------------ctt--------atgagc-----------------tgCACATTC---------------------------------------C---TTC-----A--TGACGATCACCTTTCCTGCC-TCCCAG---GGTTGTTGGAAGTGTCAAGGGGAC-ATGAAGACA---G-CCT--------------------GGCACG-TGTCGGTC-TGTGAGTGGTGATAGCTG-TGTTCATAGTACGATCGGTACTCCACAGTGTGTCAGGAGTCTAGGTGCGAATCCAACAGGACAGACCCCATGCTCTGCAAACAGAAGCCCATCTTTCTGGTTAAAGGGTGCATTTGGCAAGCAGCCAAGGGCCC-----TGGGAAGGCTTTGTGCAGCCTGGCCCTTCCCTCCTTCCATTCACC i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1142245 497 - 2246441 attgcctgcttGAATC-AACATGAAAGCACCTTGCAGAGGGACCGAGCAGGCTCAGGCAGGCAGTGCTGCAGTTTGGTGCGGCATGAGCTACGATGACTCTGGCGTGTTATC-----------------------------CGACCAGTTCTGGGGCAGCTGTC-----TGcag--a-gagcagctgggcatagcagaaagagccaggctgccctgggttcaaagcctgaacctccta-----------------------ctt--------atgagc-----------------tACACATTC---------------------------------------C---TTC-----A--TGACGATCACCTTTCCTGCC-TCCCAG---GGTTGTTGGAAGTGTCGAGGGGAC-ATGTAGACA---G-CCT--------------------GGCACG-TGTCAGTC-TGTGAGTGGTGATAGCTG-TGTTCATAGTACAATCGTTTCTCCACAGTGTGTCAGGAGTCTAGGTGCGAATCTAACAGGACAGACCCCATGCTCTGTGAACAAAAGCCCATCTTTCTGGTTAAAGGGTGCATTTGGCAAGCAGCCAAGGGCCC-----TGGGAAGGCTTTGTGCAGCCCGGCCCTGCCCTCGTTCCATTCAAT i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 719772 486 - 940639 ATCGTCAGCTTGAATC-AACGTGAAAGCACATTGCAAAGGGACCGAGCAGGCTCTGGCAGGCTTCACTGC-ATTCGGTGTGGCATGAACTGTGCAGTCTCTAG----------------------------------------ATCACTGTCTGACCAGCTCCT--------------GGGCAGCT--GTCTGGCAGAAAgagccaaactgtcttgggttcaaatcctacatctgcca-----------------------gtt--------attagc-----------------tACACTTTC---------------------------------------TTACTCCGTGAGA--TGAAGATCACCATTCCTGCC-TCACAG---GGTTGGGAGAAGCGACGAGGTGAT-ACGTAGATA--GG-CCT--------------------GGCACG-CATTGGTC-TGGAACTAGTCACAGGCG-TGTTCTCAGTGCAGTCACCACTCCAGAGCGTGCCAGGAGTCCAGCTGCGATTCTTACAGGACAGATCAGGTGCTCTATGAACAAATCCCGGTCCTTCTGGATAGAGGGTGCATTTGGCCAGCAGCCATGGGCCC-----TGGAAAGGCTTTGTGTAGCCCGGCCCTTCCCTCCTTCCATTCAGT i proCoq1.NW_012152163v1 C 0 C 0 s otoGar3.GL873522 1212855 544 + 48283576 ACTATTAACCTGAAGA-AACTGAGGCTCACATTACAAAGGGACCAAGTAGGCTCTG--------CA-----ATTTGGTGTGGCATGATCTGCGAAGTCTCTGG----------------------------------------ATCAATTTCTGGGCAGCTGTC-----CAGAG--AAAGGCAGCCAGGCATAGCAGAAAGAGCCAAAATGTTCTGAGTTCAGATCCTAAATGTGCTACATTCTCTTACTTTATGGcagtggtt--------ctcaaccttcctaatgctgcaaatatattttcattgttaaaaaggggtcatgacccacaggttgagaaccactgCTCTTTGGGA--TGAAGATCACCATCCCTGCAGTCAGAC---GGTTGGGAGAAGTGACGCAGTGAT-ATATAAACA--GG-TCT--------------------GGCACT-CATTGGTC-TGGAACTAATGATAGATG-TGTTCTC---------------CTA----ATGATAGCAGTCCAGGTGGGAATCCTCTGGGACAGGTCATGTGCTCTATGAACAAAACTGCATCCTTCTGTATAAAGGGTACATTTGGCCAGCAGCCCAGGGCCC-----TGGGAAGGCTTTATGTCACCTGGGCCTCCCCTCCTTCCATTTAAG i otoGar3.GL873522 C 0 C 0 s mm10.chr13 65977121 536 - 120421639 accactgGCTTAAGAC-AACGTGAAAACACGTTACAAAGAGCCTGTCT---TTCTGGGAGGCATCGGTTCAATT-GTTGTGGCATGAACCTTGACACCTCTGAATTATTAGCTGATTGGATGccagccacagccacagccacagccacagccacagccacagccacagccacagcca-cagccaccagGCATCACTGATGGAACCA-GCTACACTTGGTTCAGACCCTAAGCTCGGCT-----------------------CTT--------TTATTT-----------------CCGTTGTTt---------------------------------------ttcctctctgaaa--tggagattatcattcctgcc-tcactg---agaggtgaggaACTCCACGAATGC-CCACTAGCCCATG-CTG--------------------GACTCA-TCCTGA-C-TGTAACTAAAGGTGGATG-GCCTTTTAGAACAGTTTCTATTCCTGATCATGTCAGC-TTGCAGGCAGGTGTCTATCAGGACAGA-CACACTCACTGGGAACAAAACCTAGCCCTTCTGGATAAAGGATACACTTGCCTATGGACCTTGGGTGCGAGGGTGGGGGAGTTCTGTGTAGACCGATCCTTTTCTTTTTCCGT----- i mm10.chr13 I 2082 C 0 s canFam3.chr4 37160451 483 + 88276631 ACTGGAGGCCTGAG-C-AGTGTGGGAGCGTATTGCAGAGGGATCAGGCAGGCTCCAGCACGTGTCACTATAGTTTGATGTGGCACGAAATCTGAAGTCTCTGCATTGCTACC-----------------------------TGACCAATTCCAGGGCAGCTGTC-----CACAG--ACAGGCAGCC-------------AAAGTc-------cttgggttcaagttttcagtctgcca-----------------------ctt--------actggc-----------------cacgttttc---------------------------------------ctcctccatgaag--tgaggatcatcgctcttgcc-tccccg---ggttgttgggagaagcgatgaggt-g-atagaca-gtg-cct--------------------ggcaca-cagcagtc-tctaactaatgatagATG-CGCTCTGAGCACAAATATGACTCCAGAGCATGTTGGGAGTCCAGGTGTGACTCTGGGAGGACAGGCCACGTGCTCTGTGAACAAACAACCATCCTTCTGGATAGAGGG--CATTTGGCCATCAGCCAAGGGCCT-----TGGG-AGGCATTGTGTAGCCTGGCCCTTCCCTCCTTCCTTTCAAC i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 232158 487 - 960158 ttcactagttcgaaacaaatgagaaagtgcattgtaaagagacca-gcaaactctagcaGATGTCACTGCAGTTT--TGTGGCATGGTCTATGAAGTCTTTGTATTTTTATC-----------------------------TGACTAGTTCTGGGGCAGATGTC-----CCCAa--a-gagcagctaggtgtagcagaaagagatggactgtcgtgggttagagtcctaaatctgcca-----------------------cagtctcctaaattagc-----------------cacagtctc---------------------------------------ctccatc-----aactggaagtcatcattcttgcc-tcacagcgtgattgtgagaggtgatgaggtgatgatatagaaa---gttct--------------------ggcata-tattaaccttgtaactaatgatagATGTTGTTTTTAGTACAGTTATTACTCTAGAGCAAGCCAGGAGTCCAGGTGTGACTCTAATAAGGCAGACCATGTGGGCTGTGAACAAACAACCATCCTGTTGGATTAAGGGTACATTTGGCCAGCAGCC-------------TGGGAAGGTTTTGTGTAGCC--------------------TCAAC i dasNov3.JH562710 C 0 C 0 a score=234500.000000 s hg38.chr5_KI270795v1_alt 29617 21 + 131892 GAGAGGTGGGTACAGCCTCAC s panTro5.chr5 5278087 21 - 181907262 GAGGGGTGGGTACAGCCTCAC i panTro5.chr5 C 0 C 0 s panPan2.chr5 5540547 21 - 183735486 GAGGGGTGGGTACAGCCTCAC i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1672376 21 + 3967317 GAGGGGTGGGTACAGCCTCAT i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4490320 21 + 163208435 GAGGGGTGGGTACAGCCTCAC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5729059 21 - 180051392 GTGGGGTGGGTACAGCCTCAC i rheMac8.chr6 I 5988 C 0 s macFas5.chr6 5914865 21 - 181584905 GTGGGGTGGGTACAGCCTCAC i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 943929 21 - 16193990 GTGGGGTGGGTACAGCCTCAT i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1760951 21 - 21434487 GTGGGGTGGATACAGCCTCAC i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4729839 21 - 82825804 GAGGGGTGGGTACAGCCTCAC i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 225157 21 + 2521317 GTGGGGTGGGTACAGCCTCAC i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1716218 21 - 2415367 GTGGGATGGGTACAGCCTCAC i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64057903 21 + 204313951 GTAGTATGGGTACAGCCTCAT i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2186862 21 + 10068113 GTAGGGTGGGTACAGCTTCGT i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 41813 21 - 709587 GTAGGGTGGGTGCAGCCTCAT i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1142742 21 - 2246441 GTAGGATGGGTACAGCCTCAT i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 720258 20 - 940639 TTGGGGTGG-TGCAGTCTCAC i proCoq1.NW_012152163v1 C 0 C 0 s otoGar3.GL873522 1213399 17 + 48283576 TT---GTGG-TACAGCCTTGC i otoGar3.GL873522 C 0 C 0 s mm10.chr13 65977657 17 - 120421639 --GGGATGG--ACAGCCTTGC i mm10.chr13 C 0 C 0 s canFam3.chr4 37160934 5 + 88276631 ----------------TTGGG i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 232645 21 - 960158 ATGGGTTGGGTACAGCCTCGC i dasNov3.JH562710 C 0 T 57172 a score=6404938.000000 s hg38.chr5_KI270795v1_alt 29638 440 + 131892 -GGAGGTTCATGTTTCACTATTAATTACCCCCCAGGCTCTTTTATCAGCCTGTCTCTCATTCCCACCACAAGGCTGTCAGCCAGACAGTTGGAACAGAATCTCATTTGGAGTGTGTTTGCTCTTCTCCCCCA--TTGCTGGCAGAGATCTGGGATCAGCTCTGCATTAGGACAAGTTGTAAGTAAACACACATTTGCTCAAATGTGGCCC--T-CG-TCCCATTCTGTAGCCTTATCTTAGATTTGGGCAGCTTC-AAATCAGGGA--GCC--AGTGTATTtggaaaatacctaa-aagtggtttaattcaacctacccactttacagaagag--taaatggaaaattggaggttaggtcgctcatgtttatatgaactat-tgaggatacagatagag-ctggaaatcaggtcttccaa--ctgttagtccaaaacttttcccacAAA--AACCTGGCGC s panTro5.chr5 5278108 440 - 181907262 -GGAGGTTCATGTTTCACTATTAATTACCCCCCAGGCTCTTTTATCAGCCTGTCTCTCATTCCCACCACAAGGCTGTCAGCCAGACAGTTGGAACAGAATCTCATTTGGAGTGTGTTTGCTCTTCTCCCCCA--TTGCTGGCAGAGATCTGGGATCAGCTCTGCATTAGGACAAGTTGTAAGTAAACACACATTTGCTCAAATGTGGCCC--T-CG-TCCCATTCTGTAGCCTTATCTTAGATTTGGGCAGCTTC-AAATCAGGGA--GCC--AGTGTATTtggaaaatacctaa-aagtcgtttaattcaacctacccactttacagaagag--taaatggaaaattggaggttaggtcgctcatgtttatatgaactat-tgaggatacagatagag-ctggaaatcaggtcttccaa--ctgttagtccaaaacttttcccacAAA--AACCTGGCGC i panTro5.chr5 C 0 C 0 s panPan2.chr5 5540568 440 - 183735486 -GGAGGTTCATGTTTCACTATTAATTACCCCCCAGGCTCTTTTATCAGCCTGTCTCTCATTCCCACCACAAGGCTGTCAGCCAGACAGTTGGAACAGAATCTCATTTGGAGTGTGTTTGCTCTTCTCCCCCA--TTGCTGGCAGAGATCTGGGATCAGCTCTGCATTAGGACAAGTTGTAAGTAAACACACATTTGCTCAAATGTGGCCC--T-CG-TCCCATGCTGTAGCCTTATCTTAGATTTGGGCAGCTTC-AAATCAGGGA--GCC--AGTGTATTtggaaaatacctaa-aagtcgtttaattcaacctacccactttacagaagag--taaatggaaaattggaggttaggtcgctcatgtttatatgaactat-tgaggatacagatagag-ctggaaatcaggtcttccaa--ctgttagtccaaaacttttcccacAAA--AACCTGGCGC i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1672397 442 + 3967317 -GGAGGTTCATGTTTCACTATTAATTACCCCCCAGGCTCTTTTATCAGCCTGTCTGTCATTTCCACCACAAGGCTGTCAGCCAGACAGTTGGAACAGAATCTCATTTGGAGTGTGTTTGCTCTTCTCCCCCATTTTGCTGGCAGAGATCTGGGATCAGCTCTGCATTAGGACAAGTTGTAAGTAAACACACATTTGCTCAAATGTGGCCC--T-CC-TCCCATTCTGTAGCCTTATCTTGGATTTGGGCAGCTTC-AAATCAGGGA--GCC--AGTGTATTtggaaaatatctaa-aagtcgtttaattcaacctacccactttacagaagag--taaatggaaaattggaggttaggtcgctcatgtttatatgaactat-tgaggatacagatagag-ctggaaatcaggtcttccaa--ctgttagtccaaaacttttcccacAAA--AACCTGGCGC i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4490341 440 + 163208435 -GGAGGTTCATGTTTCGCTATTAATTACCCCCCAGGCTCTTTTATCAGCCTGTCTCTCATTCCCACCACAAGGCTGTCAGCCAGACAGTTGGAACAGAATCTCATTTAGAGTGTGTTTGCTCTTCTCCCCCA--TCGCTGGCAGAGATCTGGGATCAGCTCTGCATTAGGACAAGTTGTAAGTAAACACACATTTGCTCAAATGTGGCCC--T-CC-TCCCATTCTGTAGCCTTATCTTGGATTTGGGCAGCTTC-AAATCAGGGA--GCC--AGTGTATTtggaaaatacctaa-aagtcgtttaattcaacctacccactttacagaagag--taaatggaaaattggaggttgggttgctcatgtttatatgaactac-tgaggatacagatagag-ctggaaatcaggtcttccaa--ctgttggtccaaaacttttcccacAAA--AACCTGGCGC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5729080 440 - 180051392 -GGAGGTTCATGTGTCACTATTAATTATCCCTCAGGCTCTTTTATCAGCCTGTCTCTCATTCCCACCACAAGGCTGTCAGCCAGACAGTTGGAACAGAATCTCATCTGGAGTGTGTTTGCTCTTCTCCCCCA--TCGCTGGCAGAGATCTGGGATCAGCTCTGCATTAGGACAAGTTGTAAGTAAACACACATTTGCTCAAATGTGGCCC--T-CC-TCCCATTCTGTCGCCTTATCTTGGATTTGGGCAGCTTC-AGATCAGGGA--gcc--agagtgtttggaaaagacctga-aagtcatttaattcagcctacccactttacagaagag--taaatggaaaattggaggttacattgctcatgtttatatgaactac-tgaggatacagaaagag-ctggaaatcaggtcttccga--ctgttagtccaaaacttttcccacAAA--AACCTGGCAC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5914886 440 - 181584905 -GGAGGTTCATGTGTCACTATTAATTATCCCTCAGGCTCTTTTATCAGCCTGTCTCTCATTCCCACCACAAGGCTGTCAGCCAGACAGTTGGAACAGAATCTCATCTGGAGTGTGTTTGCTCTTCTCCCCCA--TCGCTGGCAGAGATCTGGGATCAGCTCTGCATTAGGACAAGTTGTAAGTAAACACACATTTGCTCAAATGTGGCCC--T-CC-TCCCATTCTGTCGCCTTATCTTGGATTTGGGCAGCTTC-AGATCAGGGA--gcc--agagtgtttggaaaagacctga-aagtcatttaattcagcctacccactttacagaagag--taaatggaaaattggaggttacattgctcatgtttatatgaactac-tgaggatacagaaagag-ctggaaatcaggtcttccga--ctgttagtccaaaacttttcccacAAA--AACCTGGCAC i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 943950 440 - 16193990 -GGAGGTTCATGTGTCACTATTAATTATCCCCCAGGCTCTTTTATCAGCCTGTCTCTCATTCCCACCACAAGGCTGTCAGCCAGACAGTTGGAACAGAATCTCATCTGGAGTGTGTTTGCTCTTCTCCCCCA--TCGCTGGCAGAGATCTGGGATCAGCTCTGCATTAGGACAAGTTGTAAGTAAACACACATTTGCTCAAATGTGGCCC--T-CC-TCCCATTCTGTCGCCTTATCTTGGATTTGGGCAGCTTC-AGatcaggga--gcc--agagtgtttggaaaagacctga-aagtcatttaattcagcctacccactttacagaagag--taaatggaaaattggaggttacattgctcatgtttatatgaactac-tgaggatacagaaagag-ctggaaatcaggtcttccga--ctgttagtccaaaacttttcccacAAA--AACCTGGCAC i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1760972 440 - 21434487 -GGAGGTTCATGTTTCACTATTAATTATCCCCCAGGCTCTTTTATCAGCCTGTCTCTCATTCCCACCACAAGGCTGTCAGCCAGACAGTTGGAACAGAATCTCATCTGGAGTGTGTTTGCTCTTCTCCCCCA--TCGCTGGCAGAGAGCTGGGATCAGCTCTGCATTAGGACAAGTTGTAAGTAAACACACATTTGCTCAAATGTGGCCC--T-CC-TCCCATTCTGTAGCCTTATCTTGGATTTGGGCAGCTTC-Aaatcaggga--gcc--agagtgtttggaaaagacctga-aagtcatttaattcagcctacccactttacagaagag--taaatggaaaattggaggttacattgctcatgtttatatgaactac-tgaggatacagaaagag-ctggaaatcaggtcttccga--ctgttagtccaaaacttttcccaTAAA--AACCTAGCGC i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4729860 440 - 82825804 -GGAGGTTCATGTTTCACTATTAATTATCCCCCAGGCTCTTTTATCAGCCTGTCTCTCATTCCCACCACAAGGCTGTCAGCCAGACAGTTGGAACAGAATCTCATCTGGAGTGTGTTTGCTTTTCTCCCCCA--TCGCTGGCAGAGATCTGGGATCAGCTCTGCATTAGGACAAGTTGTAAGTAAACACACATTTGCTCAAATGTGGCCC--T-CC-TCCCATTCTGTAGCCTTATCTTGGATTTGGGCAGCTTC-Aaatcaggga--gcc--agagtgtttggaaaagacctaa-aagtcatttaattcagcctacccactttacagaagag--taaatggaaaattggaggttacattgctcatgtttatatgaactac-tgaggatacagaaagag-ctggaaatcaggtcttccga--ctgttagtccaaaacttttcccacAAA--AACCTGGCGC i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 225178 440 + 2521317 -GGAGGTTCATGTTTCACTATTAATTATCCCCCAGGCTCTTTTATCAGCCTGTCTCTCATTCCCACCACAAGGCTGTCAGCCAGACAGTTGGAACAGAATCTCATCTGGAGTGTGTTTGCTCTTCTCCCCCA--TCGCTGGCAGAGAGCTGGGATCAGCTCTGCATTAGGACAAGTTGTAAGTAAACACACATTTGCTCAAATGTGGCCC--T-CC-TCCCATTCTGTAGCCTTATCTTGGATTTGGGCAGCTTC-Aaatcaggga--gcc--agagtgtttggaaaagacctga-aagtcatttaattcagcctacccactttacagaagag--taaatggaaaattggaggttacattgctcatgtttatatgaactac-tgaggatacagaaagag-ctggaaatcaggtcttccga--ctgttagtccaaaacttttcccaTAAA--AACCTAGCGC i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1716239 440 - 2415367 -GGAGGTTCACGTTTCACTACTAATTATCCCCCAGGCTCTTTTATCAGCCTGTCTCTCATTCCCACCACAAGGCTGTCAGCCAGACAGTTGGAACAGAATCTCATCTGGAGTGTGTTTGCTCTTCTCCCCCA--TCGCTGGCAGAGATCTGGGATCAGCTCTGCATTAGGACAAGTTGTAAGTAAACACACATTTGCTCAAATGTGGCCC--T-CC-TCCCATTCTGTAGCCTTATCTTGGATTTGGGCAGCTTG-Aaatcaggga--gcc--agagtgtttggaaaagacctaa-aagtcatttaattcagcctccccactttacagaagag--taaatggaaaattggaggttacattgctcatgtttatatgaactac-tgaggatacagaaagag-ctggaaatcaggtcttctga--ctgttagtccaaaacttttcccacAAA--AACCTGGCGC i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64057924 442 + 204313951 -GGAGGTTCATGTTTCACTATTAATTACCCCCCAGGCTCTATTATCAGCCTGTCTCTCATTCCCACCACAAGGCTGTCAG-CAGACAGTTGGAACAGATTCTCATCTGGAGTGTGTTTGCTCTTCTTCCCCA--TTGCTGGCAGAGATCTGGGATCAGCTCTGCATTAGGACAAGTTGTAAGTAAACCCACATTTGCTCAAATGTGGCTC--T-CC-TCCCATGCTGTAGCCTTATCTTGGATTTGGGCAGCTTC-Aaatcaggga--gcc--agagtgtttggaaaggaccttataagtcatttaattcagcctacccattttacagaagagtttaagtagaaaatctggggtcaagttgctcatgtttatatgaactac-tgaggatacagatagag-ctggaagttgggtctcctga--ctgttagtccAAAACTTTTCCCACAAA--AACCTGGTGC i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2186883 439 + 10068113 -GGAGGCTCACGTCTCACTATTAATTA-CCCCCAGGCTCTATTATCAGCCTGTCTCTCATTCCCACCACAAGGCTGTCAG-CAGACAGTTGGAACAGATTCTCCTCTGGGGTGTGTTTGCTCTTCTCCCCCC--TCGCTGGCAGAGATCTGGGATCAGCTCTGCACTAGGACAAGTTGTAAGTAAACACACATTTGCTCAAATGTGGCTC--T-CC-TCCCGTGCTGTAGCCTTATCTTGGATTTGGGCAACTTC-Aaatcaggga--gcc--agagtgtttggaaaggaccttatacgtcgtttaattcagcctacccattttacagaagag--taagtggaaaatctggggtcaagttgctcatgtttatatgaactac-taaggatacagatagag-ccagaggtcgggtctcctga--ctgttagtccaaaactcttcccaGAAA--AACCTGGTGC i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 41834 440 - 709587 -GGAGGTTCACATCTCACTATTAATTACCCCCCAGGCTCTATTATCAGCCTGTCTCTCGTTCCCACCACAAGGCTGTCAG-CAGACAGTTGGAACAGATTCTCATCTGGAGTGTGTTTGCTCTTCTCCCCCA--TCGCTGGCAGAGATCTGGGATCAGCTCTGCATTAGGACAATTTGTAAGTAAACACACATTTGCTCAAATGTGGCTC--T-CC-TCCCATGCTGTAGCCTTATCTTGGATTTGGGCAGCTTC-Aaatcaggga--gcc--agagtgtttggaaaggaccttataagtcatttaattcagcctacccatttcacagaagag--taagtggaaaatctggcatcaagttgctgatgtttgtatgaactac-tgaggatacagatagag-ctggaagtcgggtctcctga--ctgttagtccaaaacttttcccacAAA--AACCTGGTGC i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1142763 439 - 2246441 -GGAAGTTCATGTTTCACTATTAATTACCCCCCAGGCTCTATTATCAGCCTGTCTCTCATTCCCACCACAAGGCTGTCAG-CAGACAGTTGGAACAGATTCTCATCTGGAGTGTGTTTGCTCTTCTCCCCCA--TCGCTGGCAGAGATCTGGGATCAGCTCTGCATTAGGACAAGTTGTAAGTAAACACACATTTGCTCAAATGTGGCTC--T-CC-TCCCATGCTGTAGCCTTATCTTGGATTTGGGCAGCTTC-Aaatcaggga--gcc--agagtgtttggaaaggaccttataagtcatttaattcagcctacccattttacagaagag--taaatggaaaatctggggtcaagttgc-catgtttatatgaactgc-tggggatacagatagag-ctggaagtcaagtctcctga--ctgttagtccaaaacttttcccacAAA--AACCTGGTGC i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 720278 428 - 940639 -AGAGGTTTCTGTTTCACTGTTAACTACCCCTCAGGCTCTGCTGTCAGCCTGTCTTTCATTTCTGCCATAAGGCTTTCAGCCAGACAGTTTCAACAGAATCTCATCTGGAGTGTGTTAACTCTTCT---CCG--TTGCTGGCAGAGATCTGGGATCAGCTCTGCATTAGGACAAGTTGTAAGTAAACACACACTTGCTCAAATGGGGCCC--C-TCCTCCCATTCCATAGCCTCAT--------------GCTTC-AAATCAGGGA--GCCGAAGAGTATTtggaaaagaccttgtaagtcatttaatccagcctacccatttcacagaagag--taaactgaaaatgttgggttaagttgctcatgtttacatagataat-tgaagatgcagatagag-ctggaaatcaggtcttctga--ctcttagtctaaaacatttaccacAAAA-AAGCTGGTGC i proCoq1.NW_012152163v1 C 0 I 32 s otoGar3.GL873522 1213416 415 + 48283576 -TGAGTTTCATGTTTCACTATTAACCACCCCGCAGGCTCTGCTATCAGCCTGTCTTTCATTTCTGCCATAAGGCTTTCAGCCAGACAGCTTGAACAGAATCTAATCTGGAGTGTGTTAACTCTTCTCCCCCG--TGGCTGGCAGAGATCTGGGACAAGCTCTGCATTAGGACAAGTTGTAAGTAA--ACACATTTGCTCA-----------------TCCAATTCCATAGCCTCATCTTAGATTTGGGCAGCTTC-AAATCAGGAA--GCCAAAGCATGTTTCAAAAAGATC---TAAGTCATTTAATCCATTATACCCATTTTACAGAAGAG--TAAACTGAAAATTTTGGGTTAAGTTGTTTATATTTATATGGATAAC-TGAAGATACCGAAGGAG-CTAGAAATCAGGTTTTCTGG--TTCT------------TTTACAACAAAATAAGCTGGAGT i otoGar3.GL873522 C 0 C 0 s mm10.chr13 65977674 372 - 120421639 -AA----CCACACACCACTCCTTAGTA-CCCACAGGCTCCATTACCAGCTTGTCTTTCATTGCCATCACAAGGCTCCCAGCCAGCCAG-------------TCATCTGGAGTGTGCTAA---TTCTCCTCTG--TTGCTGGCAGAGATCTGGGATCAGCTCTGCATTAGGACAAGTTGTAAGTAAACATACA-TTACTCA-GTGTGGCCT--G-TC-TTC----CTACCACATTGTCTTAAAATCAGACAGCTTT-GAACT--GAA--GTC--TGACTG-AGGAAAAAAATCTGT-ATGTTATTTAATTCAGACAATTCATTTTAC---AGAG--AAAATTGACAAT-------------GC-----TTTGTAAGAAAC-C-TGACCACAGACATGGTGCCCAGAGATCAGGTCTTCTGAGTCTGATTGT---------------------CACCTGGAGT i mm10.chr13 C 0 C 0 s canFam3.chr4 37160939 438 + 88276631 -GAGGGTTCATGTTTCCCTCTGAATTACCCCTCAGGCTCTACCATCAGCCTGTCTTTCATTTCCACCACAAGGCTTTCAGCCAGACAGTTTGAACACAATCTAATCTGGAGTGTGTTAACTTTTCTCCCCCA--TTGTTGGCAGGGATCTGGAATTGGCTCTGCATTAGGACAAGTTGTAAATAAACATGCGTTTGCTTTACTGTAACTC--CACT-TCCTATCCCATAGCCTTCTCTTGGATTTGGGGAGCTTC-Aaatcaggga--ac---acagtgttttgaaaagaccttagaaatcatttaagccagtctacccgttttacagaagag--taaattgaaggtgttgagtgaagtcactcgtgttcatacagataac---atgatacagatagag-ttagagatcaggtcttctaa--ctcttagtccaaaac-tttaccacaat--aacctagtgc i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 175494 447 - 960158 CAAGAGTTCATGTCTCACTGTTAATTACCTCACAGGTTCTACTGTCAGCCTGCCTTTCATTTCTGCTACAATACATTTAAACAGACAGTTTGAACAGAATCTCATCTGGATCATGTTGACTTTTCTCCCCCA--TCACTGACAGACAGCTGGCGTGAGGTCTGCATCAGGACAAGCAGTAAGTAAACAAACCTTTGCT-GGTTGTAACCCCAT-CC-TCTTATCACATAGCTTTATTTCAGTTTTGAGAAGCTTCaaaatcagggaataca--agagtatttggaaaagatctttcaagttatttaattcagcctatccattttacagtagag--taaattcaatgtgttaggttaagttgcttatgattatgtagacaacttgaggatacagatagaa-ctggataccaggtcttctga--ctcttattccaaaacttttgccacaat--aaccctgtcc i dasNov3.JH562710 T 57172 C 0 a score=68282.000000 s hg38.chr5_KI270795v1_alt 30078 19 + 131892 T---------------TCCCTCCAGTAG-CACAta---- s panTro5.chr5 5278548 19 - 181907262 T---------------TCCCTCCAGTAG-CACGta---- i panTro5.chr5 C 0 C 0 s panPan2.chr5 5541008 19 - 183735486 T---------------TCCCTCCAGTAG-CACGta---- i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1672839 19 + 3967317 t---------------tcactccagtag-cacata---- i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4490781 19 + 163208435 t---------------tcgctccagtag-cacata---- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5729520 19 - 180051392 t---------------tcattccagtaa-cacata---- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5915326 19 - 181584905 t---------------tcattccagtaa-cacata---- i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 944390 19 - 16193990 t---------------tcattccagtaa-cacata---- i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1761412 19 - 21434487 t---------------tcattccagtaa-cacata---- i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4730300 19 - 82825804 t---------------tcattccagtaa-cacata---- i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 225618 19 + 2521317 t---------------tcattccagtaa-cacata---- i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1716679 19 - 2415367 t---------------tcattccagtga-cacgta---- i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64058366 31 + 204313951 TTC---GACCatttagtcactccagtaa-cacatg---- i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2187322 31 + 10068113 TTC---GACCATTTAGTCACTCTGGTAA-CACATA---- i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 42274 31 - 709587 TTC---GACCatttagtcactccagtaa-caccta---- i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1143202 31 - 2246441 TTC---GACCatttagtcactccagtaa-cacaca---- i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1213831 32 + 48283576 -TTC-AGTCATTTTTTTCACCCTCTCAA-CTTGTA---- i otoGar3.GL873522 C 0 C 0 s mm10.chr13 65978046 18 - 120421639 ---------------TTCGATCCATCGG-TCACT----- i mm10.chr13 C 0 C 0 s canFam3.chr4 37161377 24 + 88276631 -----------ttcattcactccttcagccacata---- i canFam3.chr4 C 0 I 2 s dasNov3.JH562710 175941 35 - 960158 ---cTCAATCattcattcacgtcttcaa-aaaatgtgta i dasNov3.JH562710 C 0 C 0 e proCoq1.NW_012152163v1 720706 32 - 940639 I a score=504786.000000 s hg38.chr5_KI270795v1_alt 30097 41 + 131892 ttgaacatcta-ct-agtatattc-caggccctcttctaggccc s panTro5.chr5 5278567 41 - 181907262 ttgaacatcta-ct-agtatattc-caggccctcttctaggccc i panTro5.chr5 C 0 C 0 s panPan2.chr5 5541027 41 - 183735486 ttgaacatcta-ct-agtatattc-caggccctcttctaggccc i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1672858 41 + 3967317 ttgaacatcta-ct-agtatattc-caggccctcttctaggccc i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4490800 41 + 163208435 ttgaacatcta-ct-agtatattc-caggctgtgttctaggccc i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5729539 41 - 180051392 ttgaacatctg-ct-agtatattc-caggccctattctaggcac i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5915345 41 - 181584905 ttgaacatctg-ct-agtatattc-caggccctattctaggcac i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 944409 41 - 16193990 ttgaacatctg-ct-agtatattc-caggccctattctaggcac i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1761431 41 - 21434487 ttgaacatctg-ct-agtatattc-caggccctattctaggcac i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4730319 41 - 82825804 ttgaacatctg-ct-agtatattc-caggccctattctaggcac i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 225637 41 + 2521317 ttgaacatctg-ct-agtatattc-caggccctattctaggcac i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1716698 41 - 2415367 ttgaacatctg-ct-agtatattc-cgggccctattctaggcac i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64058397 41 + 204313951 tcgaacattta-ct-agtgtattc-caggccctattctaggtac i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2187353 41 + 10068113 TCGAACGTTTA-CT-AGTGTATTC-CAGGCCCTATTCTAGGTAc i saiBol1.JH378186 C 0 T 35736 s cebCap1.NW_016107999v1 42305 41 - 709587 ttgaacgttta-ct-agtgtattc-caggccctcttctaggtac i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1143233 41 - 2246441 tcgaacgttta-ct-agtgtattc-caggccctattctaggtac i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 720738 41 - 940639 ttgaacatcta-gt-actgtagtc-caggccctattctgggcac i proCoq1.NW_012152163v1 I 32 C 0 s otoGar3.GL873522 1213863 42 + 48283576 TTGAACATATA-GTAACCATATTC-CAGGCCCTATTGCAGGCAC i otoGar3.GL873522 C 0 C 0 s mm10.chr13 65978064 38 - 120421639 -CTGACACCTG-CT-CATGTAAGCTCAGGCTTTGTTT---GTAC i mm10.chr13 C 0 I 2 s canFam3.chr4 37161403 26 + 88276631 ctgaatattgg-ct---------c-ca-------ttctagacag i canFam3.chr4 I 2 C 0 s dasNov3.JH562710 175976 42 - 960158 ttgaacacttacct-actttatgc-ctggtcattttctgggtac i dasNov3.JH562710 C 0 C 0 a score=852384.000000 s hg38.chr5_KI270795v1_alt 30138 73 + 131892 tataaaaacagagttgaataagaaataatctctgccctTGAAATGCCTAGGAA------------CTTTCCAT-TCATTCATCCAT--------------------------------------------------- s panTro5.chr5 5278608 73 - 181907262 tataaaaacagagttgaataagaaataatctctgcccttgaaatgcctaGGAA------------CTTTCCAT-TCATTCATCCAT--------------------------------------------------- i panTro5.chr5 C 0 C 0 s panPan2.chr5 5541068 73 - 183735486 tataaaaacagagttgaataagaaataatctctgccctTGAAATGCCTAGGAA------------CTTTCCAT-TCATTCATCCAT--------------------------------------------------- i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1672899 73 + 3967317 tataaaaacagagttgaataagaaataatctctgccctTGAAATGCCTAGGAA------------CTTTCCAT-TCACTCATCCAT--------------------------------------------------- i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4490841 73 + 163208435 tataaaaacagagttgaataagaaacaatctctgctctTGAAATGCCTAGGAA------------CTTTCCAT-TCATTCATCCAT--------------------------------------------------- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5729580 69 - 180051392 tataaaaacagagttgaataagaaacaatctctgcccttgaaatgcctaG----------------TTTCCAT-TCATTCAGCCAT--------------------------------------------------- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5915386 69 - 181584905 tataaaaacagagttgaataagaaacaatctctgccctTGAAATGCCTAG----------------TTTCCAT-TCATTCAGCCAT--------------------------------------------------- i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 944450 69 - 16193990 tataaaaacagagttgaataagaaacaatctctgcccttgaaatgcctag----------------tttccat-tcATTCAGCCAT--------------------------------------------------- i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1761472 69 - 21434487 tataaaaacagagttgaataagaaacaatctctgcccttgaaatgcctaG----------------TTTCCAT-TCATTCATCCAT--------------------------------------------------- i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4730360 69 - 82825804 tataaaaacagagttgaataagaaacaatctctgccctTGAAATGCCTAG----------------TTTCCAT-TCATTCATCCAT--------------------------------------------------- i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 225678 68 + 2521317 tataaaaacagaattgaataagaaacaatctctg-ccttGAAATGCCTAG----------------TTtccat-tcattcatccat--------------------------------------------------- i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1716739 69 - 2415367 tataaaagcagagttgaataagaaacaatctctgcccttgaaatgcctaG----------------TTTCCAT-TCATTCATCCAT--------------------------------------------------- i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64058438 73 + 204313951 tatgaaaacagggttgaataagaaacaatctctgccctTGAAATGCCTAGGAA------------CTTtccat-tcacccatccat--------------------------------------------------- i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2151658 74 + 10068113 tgtgaaaacagagataaataagaaacaatctctgcctttgaagtgcttacaAA------------CTTTCCATCTAACGCATCTGT--------------------------------------------------- i saiBol1.JH378186 T 35736 C 0 s cebCap1.NW_016107999v1 42346 73 - 709587 tatgaaaacagagttgaataagaaagaatctctgccctTGAAATGCCTAGGAA------------CTTTCCAC-TCACCCATCCAT--------------------------------------------------- i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1143274 73 - 2246441 tatgaaaacagaattgaataagaaacaatctctgcccttgaaatgcctaGGAA------------CTTTCCAT-TCACCCATCCAT--------------------------------------------------- i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 720779 73 - 940639 tgtgaaaacagagttgaataagaaacaacctctgcccttgaaatgcttaGGAA------------CTTTTTat-ctattcatccat--------------------------------------------------- i proCoq1.NW_012152163v1 C 0 I 1135 s otoGar3.GL873522 1213905 73 + 48283576 TGTGAAAATAGAGTTGTATAAGAAACAATTTCTGTCCTTGAAATGCTTGGGAA------------CTTTTTat-ccattcatccat--------------------------------------------------- i otoGar3.GL873522 C 0 I 16 s mm10.chr13 65978104 68 - 120421639 TGTGAAAACAGAGTTGGAAAGGAGACAGTCTCTGTTCTCCCAGT-CTCAGAA--------------cttccct-ccctccttct----------------------------------------------------- i mm10.chr13 I 2 C 0 s canFam3.chr4 37161429 48 + 88276631 tatggaaat-gagttgaataagaaatagcctctgccctcaaagtgctta---------------------------------------------------------------------------------------- i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 176018 134 - 960158 tgggaaaa-agatatgaacaagaaacaatctttg-ccttgaagtgctcaTGAATTCTTCATCTGCccatccat-tcattcatccatatcttcatctatctgttctctttatctcttcattcatgcatctgtccttat i dasNov3.JH562710 C 0 C 0 a score=261176.000000 s hg38.chr5_KI270795v1_alt 30211 28 + 131892 CCCTTTGTACGTTCATGTTTC---------------------------------------------------------------------------TGTCCAT s panTro5.chr5 5278681 103 - 181907262 CCATTTGTACGTTCATGTTTCTGTCCATGCAATCACTGATCTGGTGTTTGTCTTATCTGTTCATCTCACTACCCATCCATCCCCCCATTCGTCCTTTGTCCAT i panTro5.chr5 C 0 C 0 s panPan2.chr5 5541141 28 - 183735486 CCATTTGTACGTTCATGTTTC---------------------------------------------------------------------------TGTCCAT i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1672972 28 + 3967317 CCATTTGTACGTTCATGTTTC---------------------------------------------------------------------------TGTCCAT i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4490914 28 + 163208435 CCATTTGTACGTTCATGTTTC---------------------------------------------------------------------------TGTCCAT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5729649 28 - 180051392 CCATTTGTACATTCATGTTTC---------------------------------------------------------------------------TGTCCAT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5915455 28 - 181584905 CCATTTGTACATTCATGTTTC---------------------------------------------------------------------------TGTCCAT i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 944519 28 - 16193990 CCATTTGTACATTCATGTTTC---------------------------------------------------------------------------TGTCCAT i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1761541 28 - 21434487 CCATTTGTACATTCATGTTTC---------------------------------------------------------------------------TGTCCAT i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4730429 28 - 82825804 CCATTTGTACATTCATGTTTC---------------------------------------------------------------------------TGTCCAT i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 225746 28 + 2521317 ccatttgtacattcatgtttc---------------------------------------------------------------------------tgtccat i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1716808 28 - 2415367 CCATTAGTACATTCATGTTTC---------------------------------------------------------------------------TGTCCAT i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64058511 28 + 204313951 ccatttgtactttcatgtttc---------------------------------------------------------------------------tgttcat i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2151732 28 + 10068113 CGGtctgtccttccacccatc---------------------------------------------------------------------------tctccat i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 42419 28 - 709587 CCATTTGTACTTTCATGTTTC---------------------------------------------------------------------------TGTCCAT i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1143347 28 - 2246441 CCATTTGAACTTTCATGTTTC---------------------------------------------------------------------------TGTCCAT i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1213994 28 + 48283576 ccattcgtgtactcatgttac---------------------------------------------------------------------------cgtccat i otoGar3.GL873522 I 16 C 0 s mm10.chr13 65978172 20 - 120421639 ccctttttcc--------tcc---------------------------------------------------------------------------ctcccct i mm10.chr13 C 0 C 0 s canFam3.chr4 37161477 20 + 88276631 ----TTATGTCTTC----TTC---------------------------------------------------------------------------TGTCCAT i canFam3.chr4 C 0 T 50869 s dasNov3.JH562710 176152 26 - 960158 ccttttctacatt--tgtttg---------------------------------------------------------------------------tatccat i dasNov3.JH562710 C 0 C 0 e proCoq1.NW_012152163v1 720852 1135 - 940639 I a score=429815.000000 s hg38.chr5_KI270795v1_alt 30239 53 + 131892 --------------------GCAATCACTG-------ATCTG---------G------TGTTTGTC-------TTATCTGTTCATCT--------------------------------------------CACTACCCATCCATC---- s panTro5.chr5 5278784 53 - 181907262 --------------------GCAATCACTG-------ATCTG---------G------TGTTTGTC-------TTATCTGTTCATCT--------------------------------------------CACTACccatccatc---- i panTro5.chr5 C 0 C 0 s panPan2.chr5 5541169 53 - 183735486 --------------------GCAATCACTG-------ATCTG---------G------TGTTTGTC-------TTATCTGTTCATCT--------------------------------------------CACTACccatccatc---- i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1673000 53 + 3967317 --------------------GCAATCACTG-------ATCTG---------G------TGTTTGTC-------TTATCTGTTTATCT--------------------------------------------CACTACCCATCCATC---- i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4490942 53 + 163208435 --------------------GCAATCACTG-------ATCTG---------G------TGTTTGTC-------TTATCTGTTCATCT--------------------------------------------CACTACCCATCCATC---- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5729677 53 - 180051392 --------------------GCAATCACCA-------ATGTG---------G------TGTTTGTC-------TTATCTGTTCATCT--------------------------------------------CACTACccatccatc---- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5915483 53 - 181584905 --------------------GCAATCACCA-------ATGTG---------G------TGTTTGTC-------TTATCTGTTCATCT--------------------------------------------CACTACccatccatc---- i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 944547 53 - 16193990 --------------------GCAATCACCA-------ATGTG---------G------TGTTTGTC-------TTATCTGTTCATCT--------------------------------------------CACTACccatccatc---- i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1761569 49 - 21434487 --------------------GCAATCACCA-------ATGTG---------G------TGTT-----------TTATCTGTTCATCT--------------------------------------------CACTACCCATCCATC---- i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4730457 53 - 82825804 --------------------GCAATCACCA-------ATGTG---------G------TGTTTGTC-------TTATCTGTTCATCT--------------------------------------------CACTACccatccatc---- i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 225774 49 + 2521317 --------------------gcaatcacca-------atgtg---------g------tgtt-----------ttatctgttcatct--------------------------------------------cactacccatccatc---- i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1716836 53 - 2415367 --------------------GCAATCACCA-------ATGTG---------G------TGTTTGTC-------TTATCTGTTCATCT--------------------------------------------CACTACccatccatc---- i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64058539 60 + 204313951 --------------------gcagtcattg-------atctg---------t------tgtttatcttttcatttatctgttcatCT--------------------------------------------CACTACccattcatc---- i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2151760 114 + 10068113 --------------------ctctccatctctc---catctg---------tctcttctgtccgtctcttcattcatctattcatcctcatgactttgcatatttccttctgtcctttcatctctccatcgcgccacccatttgtc---- i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 42447 60 - 709587 --------------------GCAGTCATTG-------ATCTG---------T------TGTTTATCTTTTCATTTATCTGTTCATCT--------------------------------------------CACTACccctccatc---- i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1143375 60 - 2246441 --------------------GCAGTCATTG-------ATCTG---------T------TGTTTATCTTTTCATTTGTCTGTTCATCT--------------------------------------------CACTACccatccatc---- i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1214022 55 + 48283576 --------------------tcagtc-----------acctg---------t------cattcatc-ttttattcatctgttcattt--------------------------------------------cactatccatctgtc---- i otoGar3.GL873522 C 0 C 0 s mm10.chr13 65978192 53 - 120421639 --------------------gcagtccctt-------cccct---------c------tctctcct-------cAAAATGTTCCTTT--------------------------------------------CTCCATCCACCCACA---- i mm10.chr13 C 0 C 0 s canFam3.chr4 37110628 68 + 88276631 --------------------tcattcaccc-------atctatatttccatg------tttttatc-tacttttttcctgtccatcc--------------------------------------------ttttgtctatccatT---- i canFam3.chr4 T 50869 I 50801 s dasNov3.JH562710 176178 92 - 960158 tcatttctccacttatctctccactcatcaggcaagcatctg--------tt------tgtctgtctgtccacacatctctttatct--------------------------------------------ttccatctatccatttatc i dasNov3.JH562710 C 0 C 0 e proCoq1.NW_012152163v1 720852 1135 - 940639 I a score=108782.000000 s hg38.chr5_KI270795v1_alt 30292 15 + 131892 CCCCCATTCGTCCTT s panTro5.chr5 5278837 15 - 181907262 cccccattcgtcctt i panTro5.chr5 C 0 C 0 s panPan2.chr5 5541222 15 - 183735486 cccccattcgtcctt i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1673053 15 + 3967317 CCCCCATTCGTCCTT i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4490995 15 + 163208435 CCCCCGTTTGTCCTT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5729730 15 - 180051392 cccctattcatcctt i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5915536 15 - 181584905 cccctattcatcctt i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 944600 15 - 16193990 cccctattcatcctt i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1761618 15 - 21434487 CCACTATTCATCCTT i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4730510 15 - 82825804 cccctattcatcctt i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 225823 15 + 2521317 ccactattcatcctt i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1716889 15 - 2415367 tccctattcatccct i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64058599 15 + 204313951 cccccattcatccat i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2151874 15 + 10068113 cacacatgtattcat i saiBol1.JH378186 C 0 I 35505 s cebCap1.NW_016107999v1 42507 15 - 709587 cccccattcatccat i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1143435 15 - 2246441 cccccattcatccag i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1214077 7 + 48283576 catccat-------- i otoGar3.GL873522 C 0 C 0 s mm10.chr13 65978245 5 - 120421639 TCATC---------- i mm10.chr13 C 0 C 0 s canFam3.chr4 37161497 15 + 88276631 TTTCCAGGCATCCAT i canFam3.chr4 I 50801 C 0 s dasNov3.JH562710 176270 15 - 960158 cacctacccagccat i dasNov3.JH562710 C 0 C 0 e proCoq1.NW_012152163v1 720852 1135 - 940639 I a score=1393071.000000 s hg38.chr5_KI270795v1_alt 30307 126 + 131892 TATCTACTCATTTTTCCATTTGT---CT----------------------------------------------------------CCTCT---Ctccatccatccatga---gtacatctgtttatctctttatccattcatccagccatcAGTGTGTCTATA-AGGCCC-AAGTCCTA-GGCT-gtg-ct-gggatg s panTro5.chr5 5278852 126 - 181907262 tatctactcatttttccatttgt---ct----------------------------------------------------------cctct---ctccatccatccatga---gtacatctgtttatctctttatccattcatccagccatcAGTGTGTCTATA-AGGCCC-AAGTCCTA-GGCT-GTA-CT-GGGATG i panTro5.chr5 C 0 C 0 s panPan2.chr5 5541237 126 - 183735486 tatctactcatttttccatttgt---ct----------------------------------------------------------cctct---ctccatccatccatga---gtacatctgtttatctctttatccattcatccagccatcAGTGTGTCTATA-AGGCCC-AAGTCCTA-GGCT-GTA-CT-GGGATG i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1673068 126 + 3967317 TATCTACTCATTTTTCCATTTGT---CT----------------------------------------------------------CCTCT---Ctccatccatccatga---gtacatctgtttatctctttatccattcatccagccatcAGTGTGTCTATA-AGGCCC-AAGTCCTA-GGCT-gtg-ct-gggatg i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4491010 126 + 163208435 TATCTACTCATTTTTCCATTTGT---CT----------------------------------------------------------CCTCT---CTCCATCCATCCATGA---GTACATCTGTTTATCTCTTTatccattcatccagccatcagtgtgtctata-aggccc-aagtccta-ggct-gtg-ct-gggatg i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5729745 119 - 180051392 ----tactcatttttccatctgt---ct----------------------------------------------------------cctct---ctccatccatccatga---atacatctgtttatctctgt----attcatccagccatcAGTGtgtctgta-aggccctaagtccta-ggct-gtg-ct-gggatg i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5915551 119 - 181584905 ----tactcatttttccatctgt---ct----------------------------------------------------------cctct---ctccatccatccatga---atacatctgtttatctctgt----attcatccagccatcAGTGTGTCTGTA-AGGCCCTAAGTCCTA-GGCT-GTG-CT-GGGATG i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 944615 119 - 16193990 ----tactcatttttccatctgt---ct----------------------------------------------------------cctct---ctccatccatccatga---atacatctgtttatctctgt----attcatccagccatcAGTGTGTCTGTA-AGGCCCTAAGTCCTA-GGCT-GTG-CT-GGGATG i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1761633 119 - 21434487 ----TACTCATTTTTCCATCTGT---CT----------------------------------------------------------CCTCT---CTCCATCCATCCATGA---ATACATCTGTTTATCTCTTT----ATTCATCCAGCCATCAATGTGTCTGTA-AGGCCCCAAGTCCTA-GGCT-GTG-CT-GGGATG i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4730525 119 - 82825804 ----tactcatttttccatctgt---ct----------------------------------------------------------cctct---ctccatccatccatga---atacatctgtttatctcttt----attcatccagccatcgatGTGTCTGTA-AGGCCCCAAGTCCTA-GGCT-GTG-CT-GGGATG i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 225838 119 + 2521317 ----tactcatttttccatctgt---ct----------------------------------------------------------cctct---ctccatccatccatga---atacatctgtttatctcttt----attcatccagccatcaatGTGTCTGTA-AGGCCCCAAGTCCTA-GGCT-GTG-CT-GGGATG i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1716904 119 - 2415367 ----tactcatttttccatctgt---ct----------------------------------------------------------cctct---ctccatccatccatga---atacatctgtttatctcttt----attcatccagccatcaatGtgtctgta-aggccccaagtccta-ggct-gtg-ct-gggatg i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64058614 127 + 204313951 tatctattaatttttctatctgt---ct----------------------------------------------------------actct---ctccatccatccatga---atacatctgtttatctctttatccattcatccagccatccatGTGTCTATA-AGGCCCCAAGTCCTA-AGCT-gtg-ct-ggggtg i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2187394 127 + 10068113 tatctattaatttttccatctgt---ct----------------------------------------------------------cctct---ctccatccgtccatga---atacatctgtttatctctttatccattcatccagccatccatgtgtctatA-AGACCCCAAGTCCTA-GGCT-GTG-CT-GGGGTG i saiBol1.JH378186 I 35505 C 0 s cebCap1.NW_016107999v1 42522 127 - 709587 tatctattaatttttccatctgt---ct----------------------------------------------------------cctct---ctctgtctgtccatga---atacatctgtttatctctttatccattcatccagccatccatGTGTCTATA-AGGCCCCAAGTCCTC-GGCT-GTG-CT-GGGGTG i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1143450 126 - 2246441 tatctattaatttttccatctgt---ct----------------------------------------------------------cctct----tccatccatccatga---atacatctgtttatctctttatccattcatccagtcatccatGTGTCTCTA-AGGCCCCAGGTCCTA-GGCT-GTG-CT-GGGGTG i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1214084 129 + 48283576 tatctgttca-ttttctatctgtctact----------------------------------------------------------cctct---cctcatccgtccatga---atatatctggttatctctttatc-tttcatgtagccatcaatgtgtctCTA-AGGTGCCACGTCCTA-GACT-GTG-CTAGGAATT i otoGar3.GL873522 C 0 C 0 s mm10.chr13 65978250 170 - 120421639 TGTCCACTCATTTTCCCATGTGT---CTTTTCAGTCATTTGTTTATCTGACCACAGGGTATCTGTTTGTATGTCCCTCAATCTACGTCTCT---TTCCCTATCTCCACTA---ATACATC----TATGGCTCTATCCACTTGT--GGCAATCAAGGTATCT--------CCCGAGATCTG-GGCT-GCG----GAAATG i mm10.chr13 C 0 C 0 s canFam3.chr4 37161512 133 + 88276631 TTTCTGTTCATCTTTCTGTGAGT---CT----------------------------------------------------------TCTTTTGTCTCCACCCTTCTGTGAATGATATGTCTGCTTATGTCTTTATCCATTTTTGTAGCCATCAA--TGTCTGTA-AGGTCCCCAATCCTATGGTG-GTG-TGAGGGATT i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 176285 130 - 960158 tatctgttcctttttctatcagtctact----------------------------------------------------------tctct---cttgatccatctagtg---acctctccatttattttttcatctatccatAGTTTTGTTAGC---TCTGTAtgggcttcaggtcttt-ggctagtgatt-gagatt i dasNov3.JH562710 C 0 I 61449 e proCoq1.NW_012152163v1 720852 1135 - 940639 I a score=642001.000000 s hg38.chr5_KI270795v1_alt 30433 58 + 131892 gagataagtaagaaacaatctttgctgtttaggctt--ttacatccagtgcagacagaca s panTro5.chr5 5278978 58 - 181907262 GAGATAAGTAAGAAACAATCTTTGCTGTTTAGGCTT--TTATATCCAGTGCAGACAGACA i panTro5.chr5 C 0 C 0 s panPan2.chr5 5541363 58 - 183735486 GAGATAAGTAAGAAACAATCTTTGCTGTTTAGGCTT--TTATATCCAGTGCAGACAGACA i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1673194 58 + 3967317 gagataagtaagaaacaatctttgctgtttaggctt--ttacatccagtgcagacagaca i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4491136 58 + 163208435 gagataagtaagaaacaatctttgctgtttaggctt--ttacatccagtgcggacagatg i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5729864 58 - 180051392 gagataagtatgaaacaatctttgctgtttaggctt--ttacatctagtggggaCAGATG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5915670 58 - 181584905 GAGATAAGTATGAAACAATCTTTGCTGTTTAGGCTT--TTACATCTAGTGGGGACAGATG i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 944734 55 - 16193990 GAGATAAGTATGAAACAATCTTTGCTGTTTAGGCTT--TTACATCTA---GGGACAGATG i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1761752 58 - 21434487 GAGATGAGTATGAAACAATCTTTGCTGTTTAGGCTT--TTACATCTAGTGGGGACAGATG i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4730644 58 - 82825804 GAGATAAGTATGAAACAATCTTTGCTGTTTAGGCTT--TTACGTCTAGTGGGGACAGATG i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 225957 58 + 2521317 GAGATGAGTATGAAACAATCTTTGCTGTTTAGGCTT--TTACATCTAGTGGGGACAGATG i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1717023 58 - 2415367 gagataagtatgaaacaatctttgctgtttaggctt--ttacatctagtggggacagaca i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64058741 58 + 204313951 gagataagtatgaaacaatctttgctgttcaggctt--tcacatctagtggggacagatg i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2187521 58 + 10068113 GAGATAAGTCTGAAACAATCTTTGCTGTTCAGGCTT--TCACATTGAGTGGGGACAGATG i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 42649 58 - 709587 GAGATAAGTCTGAAACAATCTTTGCTGTTCAGGCTT--TCACATCGAGTGGGGACAGATG i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1143576 58 - 2246441 GAGATAAGTATGAAACAATCTTTGCTGTTCAGGCTT--TCACATGTAGTGGGGACAGATG i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1214213 41 + 48283576 GAGATAAGTAAAACATGGTCTT-----TTTAGGCTT--CTACCTC--------ACA---- i otoGar3.GL873522 C 0 C 0 s mm10.chr13 65978420 53 - 120421639 ACCAC-ACTGAATAGCAAACCCTTCTCTTTAGGCTTTCTCACCTCTCGTGGGGG------ i mm10.chr13 C 0 C 0 s canFam3.chr4 37161645 58 + 88276631 GAGATCAGTAAAAATCAGTCTTGGCTTGGTGGCCTT--TCACATACTGTGGATGAAGACA i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 237864 58 - 960158 GAGATAAGTACAAAACAGTCTTTGCTCTTAATCCTT--TGACATTCAGTGAGGGAGGACA i dasNov3.JH562710 I 61449 I 2 e proCoq1.NW_012152163v1 720852 1135 - 940639 I a score=1496588.000000 s hg38.chr5_KI270795v1_alt 30491 122 + 131892 cagaaacCTGCCTC-AAAGG-ATGTAT----AAAAGGCTCT---CGTACAC---AAGAAAGGACTTGCAATTCTGCCTCGTATTTCTGTGAAGGCTTCATTCTAAGGGTTGAAATAGTGCTGCATC---------------------------------------------------------------------tggatagg s panTro5.chr5 5279036 122 - 181907262 CAGAAACCTACCTC-AAAGG-ATGTAT----AAAAGGCTCT---CGTACAC---AAGAAAGGACTTGCAATTCTGCCTCGTATTTCTGTGAAGGCTTCATTCTAAGGGTTGAAATAGTGCTGCATC---------------------------------------------------------------------tggatagg i panTro5.chr5 C 0 C 0 s panPan2.chr5 5541421 122 - 183735486 CAGAAACCTGCCTC-AAAGG-ATGTAT----AAAAGGCTCT---CGTACAC---AAGAAAGGACTTGCAATTCTGCCTCGTATTTCTGTGAAGGCTTCATTCTAAGGGTTGAAATAGTGCTGCATC---------------------------------------------------------------------tggatagg i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1673252 122 + 3967317 cagaaacCTGCCTC-AAAGG-ATGTAT----AAAAGGCTCT---CGTACAT---AAGAAAGGACTTGCAATTCTGCCTCGTATTTCTGTGAAGGCTTCATTCTAAGGGTTGAAATAGTGCTGCATC---------------------------------------------------------------------tggatagg i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4491194 122 + 163208435 cagaaacCTGCCTC-AAAGG-ATGTAT----AAAAGGCTCT---CGTACAC---AAGAAAGGAGTTGCAATTCTGCCTCGTATTTCTGTGAAGGCTTCATTCTAAGGGTTAAAATAGTGCTGCATC---------------------------------------------------------------------tggatagg i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5729922 122 - 180051392 CAGAAATCTGCCTC-AAAGG-ATGTAT----AAAAGGCTCT---CGTACAC---AAAAAAGGACTTGCAATTCTGCCTCTTATTTCTGTgaaggcttcattctaagggttaaactagtgctgcatc---------------------------------------------------------------------tgggtggg i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5915728 122 - 181584905 CAGAAATCTGCCTC-AAAGG-ATGTAT----AAAAGGCTCT---CGTACAC---AAAAAAGGACTTGCAATTCTGCCTCTTATTTCTGTGAAGGCTTCATTCTAAGGGTTAAACTAGTGCTGCATC---------------------------------------------------------------------tgggtggg i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 944789 122 - 16193990 CAGAAATCTGCCTC-AAAGG-ATGTAT----AAAAGGCTCT---CATACAC---AAAAAAGGACTTGCAATTCTGCCTCTTATTTCTGTgaaggcttcattctaagggttaaactagtgctgcatc---------------------------------------------------------------------tgggtggg i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1761810 122 - 21434487 CAGAAATCTGCCTC-AAAGG-ATGTAT----AAAAGGCTCT---CGTACAC---AAAAAAGGACTTGCAATTCTGCCTCTTATTTCTGTGAAGGCTTCATTCTAAGGGTTAAACTAGTACTGCATC---------------------------------------------------------------------tgggtggg i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4730702 125 - 82825804 CAGAAATCTGCCTC-AAAGG-ATGTAT----AAAAGGCTCT---CATACACACAAAAAAAGGACTTGCAATTCCGCCTCTTATTTCTGTGAAGGCTTCATTCTAAGGGTTAAACTAGTGCTGCATC---------------------------------------------------------------------tgggtggg i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 226015 122 + 2521317 CAGAAATCTGCCTC-AAAGG-ATGTAT----AAAAGGCTCT---CGTACAC---AAAAAAGGACTTGCAATTCTGCCTCTTATTTCTGTgaaggcttcattctaagggttaaactagtgctgcatc---------------------------------------------------------------------tgggtggg i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1717081 122 - 2415367 cagaaatCTGCCTC-AAAGG-ATGTAT----AAAAGGCTCT---CGTACAC---AAAAAAGGACTTGCAATTCTGCCTCTAATTTCTGTgaaggcttcattctaagggttaaactagtgctgcatc---------------------------------------------------------------------tgggtggg i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64058799 122 + 204313951 cagaaacCTGCATC-GAAGG-ATGTAT----AAAAGGCTCT---GGTGTAC---AAGAAAGGTCTTGCAATTCCATCTCTTATTTCTGTGAAGGCTTCATTCCAAGGGTTAAAGTAGTGCTGCATC---------------------------------------------------------------------TAGTtagg i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2187579 122 + 10068113 TAGAAACCTGCATC-GAAGG-ATGTAT----AAAAGGCTCT---GGTATAC---AAGAAAGGTCTTGCAATTCTGTCTCTTATTTCTGTGAAGGCTTCATTCTAAGGGTTAAAGTAGTGCTGCATC---------------------------------------------------------------------Ggggtagg i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 42707 122 - 709587 CAGAAACCTGCATC-GAAGG-ATGTAT----AAAAGGGTCT---GGTATGT---AAGAAAGGTCTTGCAATTCCGTCTCTTATTTGTGTGAAGGCTTCATTCTAAGGTGTAAAGTAGTGCTGCATC---------------------------------------------------------------------tgggtagg i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1143634 122 - 2246441 CAGAAACCTGCATC-GAAGG-ACGTGT----AAAAGGCTCT---GGTATAC---AAGAAAGGTCTTGCAATTCCGTCTCTTATTTCTGTAAAGGCTTCATTCTAAAGGTTAAAGTAGTGCTGCATC---------------------------------------------------------------------tgggtagg i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 721987 123 - 940639 CAGAAACCTGCTTC-AAAGA-ATGTAT----AAAGGGCTCTGGCTGTACAC---TAAAAAGGGCCTGCAATTCTGCCT---ATTtctgagaaggcttcattgtgaggatgaaaatagcgctgcatct--------------------------------------------------------------------tggatagg i proCoq1.NW_012152163v1 I 1135 C 0 s otoGar3.GL873522 1214254 195 + 48283576 CAGAAACCTGACTC-AAAGG-ATGTGTAAAGAAAGGACTCTGGTTGTTCAC---TAAAAGGGAGTCACAATTCTGCTT---ATTTCTAAGAAGGCTGCATTGTGAGGCTGAAAATGGTACTGCATCTCAtttatttatttattttctttttcttttcttgagactgagtctccctctgtggagtctccctcttcctgggtaga i otoGar3.GL873522 C 0 I 241 s mm10.chr13 65978473 113 - 120421639 -AGAAACCTGCATC-TAAGG-ATGTAG----ACAGGGATC----CTCATAC---AAGAAAGG------AGACCTGCCTCTTATTTCTGAGAAGGCTTCATTCAGAGGGTGAGGGCAGT-CACCTCT---------------------------------------------------------------------TGGGTAGG i mm10.chr13 C 0 C 0 s canFam3.chr4 37161703 126 + 88276631 CAGAAAACTGCCTCTAGAGT-ATGTAT----TATTGGCTCTGGTGGTATAC---AAAAGGGGACTTGGAGTTCTTCCTATTATTTCGGAAAAGGCT-CATTCTGAGGGTAAAAATCAAGCTGCACCT--------------------------------------------------------------------TGGGTAGG i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 237924 47 - 960158 CAGAGAGGTGCCTC-TAAGGTATGTGT----AAAGGGCTCTGCTTGTATAC---A---------------------------------------------------------------------------------------------------------------------------------------------------- i dasNov3.JH562710 I 2 C 0 a score=999100.000000 s hg38.chr5_KI270795v1_alt 30613 72 + 131892 agtttcccagtggggaagatggggaagaac--------------------------------------------ctaggctgagggaacaacaggagcaggggcgtgaggcTGTCC s panTro5.chr5 5279158 72 - 181907262 agtttcccagtggggaagatggggaagaac--------------------------------------------ctaggctgagggaacaacaggagcaggggcgtgaggcTGTCC i panTro5.chr5 C 0 C 0 s panPan2.chr5 5541543 72 - 183735486 agtttcccagtggggaagatggggaagaac--------------------------------------------ctaggctgagggaacaacaggagcaggggcgtgaggcTGTCC i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1673374 72 + 3967317 agtttcccagtggggaagatggggaagaac--------------------------------------------ctaggctgagggaacaacaggagcaggggcgtgaggcTGTGC i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4491316 72 + 163208435 agtttcccagtggggaagatggggaagaac--------------------------------------------ctaggctgagggaacaacaggagcagaggcatgacgctatcc i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5730044 75 - 180051392 agtttcccagtggggaagatggggaagaac-----------------------------------------cttctaggctgaggtaacaacaggagcaaaggcgtgagggtgTCC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5915850 75 - 181584905 agtttcccagtggggaagatggggaagaac-----------------------------------------cttctaggctgaggtaacaacaggagcaaaggcgtgaggGTGTCC i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 944911 75 - 16193990 agtttcccagtggggaagatggggaagaac-----------------------------------------cttctaggctgaggtaacaacaggagcaaaggcatgagggtgtcc i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1761932 75 - 21434487 agtttcccagtggggaagatggggaagaac-----------------------------------------cttctaggctgaggtaacaacaggagcaaaggcgtgaggGTGTCC i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4730827 75 - 82825804 agtttcccagtggggaagatggggaagaac-----------------------------------------cttctaggctgaggtaacaacaggagcaaaggcgtgaggGTGTCC i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 226137 75 + 2521317 agtttcccagtggggaagatggggaagaac-----------------------------------------cttctaggctgaggtaacaacaggagcaaaggcgtgagggtgTCC i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1717203 75 - 2415367 agtttcccagtggggaagatggggaagaac-----------------------------------------cttctaggctgaggtaacaacaggagcaaaggcgtgaggGTGTCC i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64058921 75 + 204313951 agtttcccagtggggaagatggggaagaac-----------------------------------------tttctaggctgagggaacagtgggggcaaaagtgtgaggGTGTCC i calJac3.chr2 C 0 I 212 s saiBol1.JH378186 2187701 75 + 10068113 agtttcccagtggggaagatggggaagaac-----------------------------------------cgtctaggctaagggaacaaccggggcaaaggtgtgaggGTGTCC i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 42829 75 - 709587 agtttcccagtggggaagatggggaagaac-----------------------------------------cttctaggctaagggagcaacgggggcaaaggtatgaggGTGTCC i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1143756 75 - 2246441 agtttcccagtggggaagatgggtaagaaa-----------------------------------------cttctaggccgagggaacaacgggggcaaaagtgtgaggGTGTCC i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 722110 75 - 940639 agtttcccagtggggaagactgggaaaaac-----------------------------------------cttctaggctgagggaacagcagggtcaaagacataagggtatct i proCoq1.NW_012152163v1 C 0 C 0 s otoGar3.GL873522 1214690 72 + 48283576 agtttcctagtggtaaagactgggaagaag-----------------------------------------cttctagactgacggaacaacagggtcaaagacataagggta--- i otoGar3.GL873522 I 241 C 0 s mm10.chr13 65978586 68 - 120421639 -AGTCCCCAATGGTAACGACCAGGAAGAAA-----------------------------------------CTCTTAGGTTGAGGGGACAATGGTG----AAGCTCGAGGGTCT-- i mm10.chr13 C 0 C 0 s canFam3.chr4 37161829 116 + 88276631 AGTTTCCTAGTGGGGAAGATGGGaaaaaacaaaaaacaaaaaacaaaaaacaaaaaacaaaccaaaaCACCTttctaggctgagggaacaacaaggacaaaagcatgaggatgcct i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 237971 61 - 960158 ------------GAGAATACAGGAAAGAAC-----------------------------------------CATCTAGGCTGATGGA--AACAGTGTCAAAGGCATGAGGATGCCT i dasNov3.JH562710 C 0 C 0 a score=3107532.000000 s hg38.chr5_KI270795v1_alt 30685 231 + 131892 GGTGGGTGTAGGAGGAAGAGGAGTTTCGTGTCATTTGATGACTCCTTCAAGGAGCAAACTGGCCA-GTT-ATAGTCAAGAGGGGTTGTCAAAGCCTATTTGGAGAGGACCTTGAA------T------CCCAGAGCCAGAATGCCACCCTATGCGCGTTTGGGAGGCACTGTAAGA-TTTTC----AGCAGGAAGTGACATAGGTAGGTGAGCATTT--CAGAGAGACCACTCCAGGCAGTAGGATTAGAGG s panTro5.chr5 5279230 231 - 181907262 GGGGGGTGTAGGAGGAAGAGGAGTTTCCTGTCATTTGATGACTCCTTCAAGGAGCAAGCTGGCCA-GTT-ATAGTCAAGAGGGGTTGTCAAAGCCTATTTGGAGAGGACCTTGAA------T------CCCAGAGCCAGAATGCCACCCTATGCACGTTTGGGAGGCACTGTAAGA-TTTTC----AGCAGGAAGTGACATAGGTAGGTGAGCATTT--CAGAGAGACCACTCCAGGCAGTAGGATTAGAGG i panTro5.chr5 C 0 C 0 s panPan2.chr5 5541615 231 - 183735486 GGGGGCTGTAGGAGGAAGAGGAGTTTCCTGTCATTTGATGACTCCTTCAAGGAGCAAGCTGGCCA-GTT-ATAGTCAAGAGGGGTTGTCAAAGCCTATTTGGAGAGGACCTTGAA------T------CCCAGAGCCAGAATGCCACCCTATGCACATTTGGGAGGCACTGTAAGA-TTTTC----AGCAGGAAGTGACATAGGTAGGTGAGCATTT--CAGAGAGACCACTCCAGGCAGTAGGATTAGAGG i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1673446 231 + 3967317 GGTGGGTGTAGGAGGAAGAGGAGTTTCATGTCATTTGATGACTCCTTCAAGGAGCAAACTGGCCA-GTT-ATAGTCAAGAGGGGTTGTCAAAGCCTATTTGGAGAGGACCTTGAA------T------CCCAGAGCCAGAATGCCACCCTATGCGCGTTTGCGAGGCACTGTAAGA-TTTTC----AGCAGGAAGTGACATAGGTAGGTGAGCATTT--CAGAGAGACCACTCCAGGCAGTAGGATTAGAGG i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4491388 231 + 163208435 ggtgcgtgtaggaggaagaggagtttcatgtcatttgatgactccttcaaggagccaactggcca-gtt-atagtcaagaggggttgtcaaagcctatttggagaggatcttgaa------t------cccagagccagaatgccaccctgtgcatgtttgggaggcactgtagga-ttttc----agcaggaagtgacataggtaggtgagcattt--cagagagaccactccaggcagtaggattagagg i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5730119 233 - 180051392 GGTGGGTGTAGGAGGAAGAGGAGTTTTGTGCCATTTCATGACTCCTTCAAGGAGCAAACTGGTCA-GTT-TTAGTCAAGAGGGGTTGTCAAAGCCTATTTGGAGAGGACCTTGAA------T------CCCAGAGCCAGAATGCCACGCTGTGGGCGTTTGGGAGGCACTGTAGGG-TTTTC----AGCAGGAAGTGACATAGGTAGGTGAGCATTTCCCAGAGAGGCCACTCCAGGCAGTAGGATTAGAGA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5915925 233 - 181584905 GGTGGGTGTAGGAGGAAGAGGAGTTTTGTGCCATTTCATGACTCCTTCAAGGAGCAAACTGGTCA-GTT-TTAGTCAAGAGGGGTTGTCAAAGCCTATTTGGAGAGGACCTTGAA------T------CCCAGAGCCAGAATGCCACGCTGTGGGCGTTTGGGAGGCACTGTAGGG-TTTTC----AGCAGGAAGTGACATAGGTAGGTGAGCATTTCCCAGAGAGGCCACTCCAGGCAGTAGGATTAGAGA i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 944986 233 - 16193990 ggtgggtgtaggaggaagagGAGTTTTGTGCCATTTCATGACTCCTTCAAGGAGCAAACTGGTCA-GTT-TTAGTCAAGAGGGGTTGTCAAAGCCTATTTGGAGAGGACCTTGAA------T------CCCAGAGCCAGAATGCCACGCTGTGGGCGTTTGGGAGGCACTGTAGAG-TTTTC----AGCAGGAAGTGACATAGGTAGGTGAGCATTTCCCAGAGAGGCCACTCCAGGCAGTAGGATTAGAGA i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1762007 233 - 21434487 GGTGGGTGTAGGAGGAAGAGGAGTTGTGTGCCATTTCATGACTCCTTCGAGGAGCAAACTGGTCA-GTT-TTAGTCAACAGGGGTTGTCAAAGCCTATTTGGAGAGGACCTGGAA------T------CCCAGAGCCAGAATGCCACGCTGTGGGCGTTTGGGAGGCACTGTAGGG-TTTTC----AGCAGGAAGTGACATAGGTAGGCGAGCATTTCCCAGAGAGGCCACTCCAGGCAGTAGCATTAGAGA i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4730902 233 - 82825804 GGTGGGTGTAGGAGGAAGAGGAGTTTTGTGCCATTTCATGACTCCCTTGAGGAGCCAACTGGTCA-GTA-ATAGTCAAGAGGGGTTGTCAAAGCCTATTTGGAGAGGACCTTGAA------T------CCCAGAGCCAGAATGCCACGCTGTGGGCATTTGGGAGGCACTGTAGGG-TTTTC----AGCAGGAAGTGACATAGGTAGGTGAGCATTTCCCAGAGAGGCCACTCCAGGCGATAGGATTAGAGA i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 226212 233 + 2521317 GGTGGGTGTAGGAGGAAGAGGAGTTGTGTGCCATTTCATGACTCCTTTGAGGAGCAAACTGGTCA-GTT-TTAGTCAACAGGGGTTGTCAAAGCCTATTTGGAGAGGACCTTGAA------T------CCCAGAGCCAGAATGCCACGCTGTGGGCGTTTGGGAGGCACTGTAGGG-TTTTC----AGCAGGAAGTGACATAGGTAGGTGAGCATTTCCCAGAGAGGCCACTCCAGGCAGTAGCATTAGAGA i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1717278 233 - 2415367 AGTGGGTGTAGGAGGAAGAGGAGTTTTGTGCCATTTCGTGACTCCTTCAAGGAGCAAACTGGTCA-GTT-ATAGTCAAGAGGGGTTGGCAAAGCCTATTTGGAGAGGACCTTGAA------T------CCCAGAGCCAGAATGCCACGCTGTGGGTGTTTGGGAGGCACTGTAGGG-TTTTC----AGCAGGAAGTGACATAGGTAGGTGAGCATTTCCCAGAGAGGCCACTCCAGGCAGTAGGATTAGAGA i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64059208 231 + 204313951 GGTGGGTGTAGGAGGAAGAGGAGTTTCATGCCATTTGGTGACTCCTTCAAGTAGTAAACTGGGCA-GTT-CTAGTCAAGAGGGTTTGTCAAAGCCTATTTGGAAAGGACCTTGAA------T------CCCAGAGCCAGAATGCCACCCTGTGGGCGTTTGGGAGCCACTACATGA-TTTTC----AGCAGGAAGTGACATAGGTAGGTGAGCATTT--CAGAGCGACCACTTCAGGCAGTAGGACTAGAGA i calJac3.chr2 I 212 C 0 s saiBol1.JH378186 2187776 231 + 10068113 GGTGGGTATAGGAGGAAGAGGAGTTTCATGCCATTTGGTGACTCCTTCAAGTAGCAAACTGGGCA-GTT-CTAGTCAAGAGGGTTTGTCAAAGGCTATTTGGGAAGGACCTTGAA------T------CCCAGAGCCAGAATGCCACCCTGTGGGCATTTGGGAGCCACTGCATGA-TTTTC----AGCAGGAAGTGACATAGGTAGGTGAGCATTT--CAGAGAGACCACTTCAGGCAGTAGGACTAGAGG i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 42904 231 - 709587 GGTGGGTGTAGGAGGAAGAGGAGTTTCATGCCATTTGGTGACTCCTTCAAGTAGCAAACTGGGCA-GTT-CTAGTCAAGTGGGTTTGTCAAAGCCTATTTGGAAAGGACCTTGAA------T------CCCAGAGCCAGAATGCCACCCTGTGGGCGTTTGGGAGCCACTGCATGA-TTTTC----AGCAGGAAGTGACGTAGGTAGGTGAGCATTT--CAGAGAGACCACTTCAGGCAGTAGGACTAGAGG i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1143831 231 - 2246441 GGTGGGTGTAGGAGGAAGAGGAGTTTCATGCCATTTGGTGACTCCTTCAAGTAGCAAACTGGGCA-GTT-CTAGTCAAGAGGGTTTGTCAAAGCCTATTTGGAAAGGACCTTGAA------T------CCCAGAGCCAGAATGCCACCCTGTGGGCGTTTGGGAGCCACTGCATGA-TTTTC----AGCAGGAAGTGATGTAGGTAGTTGAGCATTT--CAGAGAGACCACTTCAGGCAGTAGGACTAGAGG i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 722185 237 - 940639 ggtgggtttggaaggaagaggaattccatgtcatttgatgactccttcaaggagtgaagtggccaggta-ataggcaggagaggtTGTAGATAGCTATTTTGAAAGGACCTTAAA-ACTAGA------CCTGGAGTCAGAATGCCACCCTGTGGGCATTTGGAAACCATCGCAGAG-TTTTC----AGCGGCAAGTGACGTAGGTCAATGAGCATTT--TAGAGAGATCATTCCACGTAGTTGGATCGGAGG i proCoq1.NW_012152163v1 C 0 I 23 s otoGar3.GL873522 1214762 229 + 48283576 ----ggTTTGGGAGGAAGAGGAATTCCATGTTATTTGATGACTCCTTCAAGAACTGAACTGGATAGGTA-AG----AGGAGAGGTTGTAGAT-GCTAAATTGAAAGGGCCTTGAATACCAGA------CCTGAAGCCAGAATGCCAGCCTGTGGGCATTTGAGAACCATTGCAGAG-TTTTC----AGTAGGAAGTAACGTAGGTCAATGAGCATTC--TAGAGAGATCATTGCATGGAGTTCAATCAGAAG i otoGar3.GL873522 C 0 C 0 s mm10.chr13 65978654 223 - 120421639 GGAGGGCTT----GGAGGGGGGATGTGATGTCCTTTGATGGCTCTTTCAGGGAGTGACCTATGTA-GTTAATAGTTGAGAGAGGTTGTCAAAGT----------AGGACCTTGAA------TATTAGACTTGGAGCCAGAATGCTGCCCTGTGGGTGTCTGGAAACCATTGCAGGG-CTCTC----AGTGGGCCAGGACTTAGGTCAGTGAGCATTT---AGAAAGATTGCTTTTGATGGTTGGATCAGAGG i mm10.chr13 C 0 C 0 s canFam3.chr4 37161945 235 + 88276631 tgtgggcttgggat-----ggacttccatttaacttgatagctccttcaaggagtgaactggctg-gctaatatttaagagaagatgttgaaggctgtttcgaaaggaccttgaa------tatcatacctgaagccacaatatcaccctgtgggcatttgggaaccagtgc--gg-tttttaggaaggaggaagtaacttagggtactgggcattt--tagaaagatcatcctaggcagtagggtcagggg i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 238032 224 - 960158 GGAGGATATGGTAGGGGGAGGATTTCCATTCCATTTGAACACTCCTTCAAGAAATGAACTGGCTG-GCT-C--ATCAagagaggtcatcaaagaccattttgaaaggaccttgaa------tgccagacctggagctagaa----------tgggcactggaaaaccattgcaggatttttc----agcaagaa-tgacatagatcagtcagtgatt--tagaaagatcactctagggagttagatcagaa- i dasNov3.JH562710 C 0 C 0 a score=270043.000000 s hg38.chr5_KI270795v1_alt 30916 28 + 131892 CAGAGGGACT-CAAGTGTGAGGAGTGTTT s panTro5.chr5 5279461 28 - 181907262 CAGAGGGACT-CAAGTGTGAGGAGTGTTT i panTro5.chr5 C 0 C 0 s panPan2.chr5 5541846 28 - 183735486 CAGAGGGACT-CAAGTGTGAGGAGTGTTT i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1673677 28 + 3967317 CAGAGGGACT-CAAGTGTGAGGAGTGTTT i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4491619 28 + 163208435 cagagggact-caagtgtaaggagtgttt i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5730352 28 - 180051392 CAGAGGAACT-CAAGTGTGAGGAGTGTTT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5916158 28 - 181584905 CAGAGGAACT-CAAGTGTGAGGAGTGTTT i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 945219 28 - 16193990 CAGAGGAACT-CAAGTGTGAGGAGTGTTT i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1762240 28 - 21434487 CAGAGGAACT-CAAGTGTAAGGAGTGTTT i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4731135 28 - 82825804 CAGAGGAACT-CAAGTGTGAGGAGTGTTT i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 226445 28 + 2521317 CAGAGGAACT-CAAGTGTGAGGAGTGTTT i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1717511 28 - 2415367 CAGAGGAACT-CAAGTGTGAGGAGTGTTT i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64059439 29 + 204313951 AAGAGGGGCTGTAGGTGTGAGGAGTGTTT i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2188007 29 + 10068113 AAGAGGGGCTATAGGTGTGAGGAGTGTTT i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 43135 29 - 709587 AAGAGGGGCTGTAGGTGTGAGGAGTGTTT i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1144062 29 - 2246441 AAGAGGGGCTGTAGGTGTGAGGAGTGTTT i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1214991 24 + 48283576 ---AGGAAATACTGGAGGTACAAGTTT-- i otoGar3.GL873522 C 0 C 0 s mm10.chr13 65978877 25 - 120421639 ---AGAGAGTGGCAGTATCAAGGATTTT- i mm10.chr13 C 0 C 0 s canFam3.chr4 37162180 26 + 88276631 --gagagactggaagtac-aggagtgttt i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 238256 27 - 960158 -agaaagact-ggatcatgagaaatgttt i dasNov3.JH562710 C 0 C 0 e proCoq1.NW_012152163v1 722422 23 - 940639 I a score=1517355.000000 s hg38.chr5_KI270795v1_alt 30944 107 + 131892 AGAGCCTGTTCTGACAGCCTTAG-GACAGTTGACAT-CC-TG--CCTGAATCAAGGTGTCCATAGCAGAGATGGGGCCTGCAGGGTGGGGTTTGAGCGACATGTGGA-GAA----AG s panTro5.chr5 5279489 107 - 181907262 AGAGCCTGTTCTGACAGCCTTAG-GACAGTTGACAT-CC-TG--CCTGAATCAAGGTGTCCATAGCAGAGATGGGGCCTGCAGGGTGGGGTTTGAGCGACATGTGGA-GAA----AG i panTro5.chr5 C 0 C 0 s panPan2.chr5 5541874 107 - 183735486 AGAGCCTGTTCTGACAGCCTTAG-GACAGTTGACAT-CC-TG--CCTGAATCAAGGTGTCCATAGCAGAGATGGGGCCTGCAGGGTGGGGTTTGAGCGACATGTGGA-GAA----AG i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1673705 107 + 3967317 AGAGCCTGTTCTGACAGCCTTAG-GATAGTTGACAT-CC-TG--CCTGAATCAAGGTGTCCATAGCAGAGATAGGGCCTGCAGGGTGGGGTTTGAGTGACATGTGGA-GAA----AG i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4491647 111 + 163208435 agagcctgttctgacagccttag-gacagttgacat-cc-tg--cctgaatcaaggtgtccatagcagagattgggcctgcagggtggggtttgagcgacatgtgga-gaaagttag i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5730380 111 - 180051392 AGAGCCTGTCCTGACAGCCTTAG-GACGGTTGACAT-CC-TG--CCTGAATCAAGGTGTCCATAGCAGAGATGGGGCCTGCAGGGTGGGGTTTGAGCGACATGTGGA-GAAAGTTAG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5916186 111 - 181584905 AGAGCCTGTCCTGACAGCCTTAG-GACGGTTGACAT-CC-TG--CCTGAATCAAGGTGTCCATAGCAGAGATGGGGCCTGCAGGGTGGGGTTTGAGCGACATGTGGA-GAAAGTTAG i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 945247 111 - 16193990 AGAGCCTGTCCTGACAGCCTTAG-GACGGTTGACAT-CC-TG--CCTGAATCAAGGTGTCCATAGCAGAGATGGGGCCTGCAGGGTGGGGTTTGAGCGACATGTGGA-GAAAGTTAG i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1762268 111 - 21434487 AGAGCCTGTCCTGACAGCCTTAG-GACGGTTGACAT-CC-TG--TCTGAATCAAGGTGTCCATAGCAGAGATGGGGCCTGCAGGGTGGGGTTTGAGCGACATGTGGA-GAAAGTTAG i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4731163 111 - 82825804 AGAGCCTGTCCTGACAGCCTTAG-GACAGTTGACAT-CC-TG--CCTGAATCAAGGTGTCCATAGCAGAGATGGGGCCTGCAGGATGGGGTTTGAGCGACATGTGGA-GAAAGTTAG i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 226473 111 + 2521317 AGAGCCTATCCTGACAGCCTTAG-GACGGTTGACAT-CC-TG--CCTGAATCAAGGTGTCCATAGCAGAGATGGGGCCTGCAGGGTGGGGTTTGAGCGACATGTGGA-GAAAGTTAG i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1717539 111 - 2415367 AGAGCCTGTTCTGACAGCCTTAG-GACGGTTGACAT-CC-TG--CCTGAATCAAGGTGTCCATAGCAGAGATGGGGCCTGCAGGGTGGGGTTTGAGCGACATGTGGA-GAAAGTTAG i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64059468 111 + 204313951 AAAGCCTGTTCTGACAGCCTTAG-GAGAGTTGACAT-CC-TG--TCTGAATGAAGGTGTCCATAGTAGAGATGGGGCCTGCAGGGTGGGGTTTGAGGGACATATGGA-GAAAGTTAG i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2188036 111 + 10068113 AGAGCCTGTTCTGACAGCCTTAG-GAGGGTTGACAT-CC-TG--TCTGAATCAAGGTGTCCATAGTAGAGATGGGGCCTGCAGGGTGGGGTTTGAGGGACATATGGA-GAAAGCTGT i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 43164 111 - 709587 AGAGCCTGTTCTGACAGCCTTAG-GAGGGTTGGCAT-CC-TG--TCTGAATCAAGGTGTCCATAGTAGAGATGGGGCCTGCAGGGTGGGGTTTGAGGGACATGTGGA-GAAAGTTAG i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1144091 111 - 2246441 AGAGCCTGTTCTGACAGCCTTAG-GAGGGTTGACTT-CC-TG--TCTGAATCAAGGTGTCCATAGTAGAGATGGGGCCTGCAGGGTGGGGTTTGAGGGACCTATGGA-GAAAGTTAG i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 722445 106 - 940639 GAAGCCTGTTCTGACGGCCTC-G-GAGAGCTGACAT-CC-GG--CCTGAATCAAGGTGCTGGCAGTAGGGATGAGGCCTGCAGGGTGGGGTTTGAGTGAAATGTGGA-GGAAG---- i proCoq1.NW_012152163v1 I 23 I 29 s otoGar3.GL873522 1215015 106 + 48283576 GAGGCCTGCTCTGATAGCCTTAG-GTGAGCTGACACACT-GA--CCTGAATCAAGGTGTTGGCAGT--GGTTGGGGTCTGCAAGGTAGGGTTTGAGTGAAATGTGGA-GGAAG---- i otoGar3.GL873522 C 0 I 6 s mm10.chr13 65978902 96 - 120421639 AAAGTTGGCTCTAATAGCCCCAG-AACATTTGACAT-CA-CG--AC---------ATCTTGGCAGTAGAGTTGGGGACTGGA-GGTGGGATTTCAGAGAC-TGGAGA-GGGAG---- i mm10.chr13 C 0 I 6 s canFam3.chr4 37162206 111 + 88276631 aaggcctgttctgacaactgtag-gagagttgacat-caggg--cctgaataaagatgtggactgtggagatggggcctaaggggtggag-ttgaatgatgtggagg-aagagttag i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 238283 115 - 960158 aaaccctgttctaatagacctagtgagggttgacat-ca-tggcctcaattcaaggtattgacagtggagatagatcctagggggcagggtttgagtgtcatgtggaggaaagttaa i dasNov3.JH562710 C 0 C 0 a score=241533.000000 s hg38.chr5_KI270795v1_alt 31051 16 + 131892 TAGAACTTGAATGGTG s panTro5.chr5 5279596 16 - 181907262 TAGAACTTGAATGGTG i panTro5.chr5 C 0 C 0 s panPan2.chr5 5541981 16 - 183735486 TAGAACTTGAATGGTG i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1673812 16 + 3967317 TAGAACTTGAATGGTG i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4491758 16 + 163208435 tagaacttgaatggtg i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5730491 16 - 180051392 TAGAACTTGAATGGTG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5916297 16 - 181584905 TAGAACTTGAATGGTG i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 945358 16 - 16193990 TAGAACTTGAATGGTG i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1762379 16 - 21434487 TAGAACTTGAATGGTG i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4731274 16 - 82825804 TAGAACTTGAATGGTG i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 226584 16 + 2521317 TAGAACTTGAATGGTG i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1717650 16 - 2415367 TAGAACTTGAATGGTG i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64059579 16 + 204313951 TAGAACTTGAATGGTG i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2188147 16 + 10068113 TAGAATTTGAATGGTG i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 43275 16 - 709587 TAGAATTTGAATGGTG i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1144202 16 - 2246441 TAGAACTTGAATGGAG i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1215127 16 + 48283576 CAGAACTTGAATGGAT i otoGar3.GL873522 I 6 I 7 s mm10.chr13 65979004 16 - 120421639 CAGGCCTTGAAGAGTG i mm10.chr13 I 6 C 0 s canFam3.chr4 37162317 16 + 88276631 cagaacttgaatggtc i canFam3.chr4 C 0 I 5 s dasNov3.JH562710 238398 16 - 960158 caggacttgaatgatg i dasNov3.JH562710 C 0 C 0 e proCoq1.NW_012152163v1 722551 29 - 940639 I a score=240661.000000 s hg38.chr5_KI270795v1_alt 31067 22 + 131892 --ATGTCAGAGATG---TCTGACTGGG s panTro5.chr5 5279612 22 - 181907262 --ATGTCAGAGATG---TCTGACTGGG i panTro5.chr5 C 0 C 0 s panPan2.chr5 5541997 22 - 183735486 --ATGTCAGAGATG---TCTGACTGGG i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1673828 22 + 3967317 --ATGTCAGAGATG---TCTGACTGGG i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4491774 22 + 163208435 --atgtcagagatg---tctgactggg i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5730507 22 - 180051392 --ATGTCAGAGATG---TCTGACTGGG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5916313 22 - 181584905 --ATGTCAGAGATG---TCTGACTGGG i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 945374 22 - 16193990 --ATGTCAGAGATG---TCTGACTGGG i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1762395 22 - 21434487 --ATGTCAGAGATG---TCTGACTGGG i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4731290 22 - 82825804 --AGGTCAGAGATG---TCTGACGGGG i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 226600 22 + 2521317 --ATGTCAGAGATG---TCTGACTGGG i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1717666 22 - 2415367 --ATGTCAGAGATG---TCTGACTGGG i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64059595 22 + 204313951 --ATGTCAGAGATG---TCTGACAGGG i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2188163 22 + 10068113 --ATGTCAGAGATG---TCTGACAGGG i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 43291 21 - 709587 --ATGTCAGAGATG---TCTGACA-GG i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1144218 22 - 2246441 --ATGTCAGAGATG---TCTGACAGGG i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 722580 22 - 940639 --ATGTCAGAGATG---TCTGACTGGG i proCoq1.NW_012152163v1 I 29 I 123 s otoGar3.GL873522 1215150 19 + 48283576 --ATGTCAGAGATG---TCTGACT--- i otoGar3.GL873522 I 7 C 0 s mm10.chr13 65979020 1 - 120421639 ---------------------A----- i mm10.chr13 C 0 C 0 s canFam3.chr4 37162338 22 + 88276631 --ctgtttgtggac---cctaacagag i canFam3.chr4 I 5 C 0 s dasNov3.JH562710 238414 26 - 960158 aactatcatatatggatcctgatgaa- i dasNov3.JH562710 C 0 C 0 a score=734054.000000 s hg38.chr5_KI270795v1_alt 31089 83 + 131892 GC------CGGAGGGGTGGAGGGAG----------------GGGGT------------ATAgatgacaatgccatttgcttagctaaagaccacaggagaa--agggt-------tgtgggggat-----g s panTro5.chr5 5279634 83 - 181907262 GC------CGGAGGGGTGGAGGGAG----------------GGGGT------------ATAgatgacaatgccatttgcttagctaaagaccacaggagaa--agggt-------tgtgggggat-----g i panTro5.chr5 C 0 C 0 s panPan2.chr5 5542019 83 - 183735486 GC------CGGAGGGGTGGAGGGAG----------------GGGGT------------ATAgatgacaatgccatttgcttagctaaagaccacaggagaa--agggt-------tgtgggggat-----g i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1673850 83 + 3967317 GC------CGGAGGGGTGGAGGGAG----------------GGGGT------------ATAgatgacaatgccatttgcttagctaaagaccacaggagaa--agggt-------tgtgggggat-----g i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4491796 83 + 163208435 gc------cggagggatggagggag----------------ggagt------------atagatgacaatgccatttgcttagctaaagaccacaggagaa--agggt-------tgtgggggat-----g i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5730529 85 - 180051392 GC------TGGAGGGATGGAGGGAG----------------GAAGT------------ATAgatgacaatgccatttgcttagctgaagaccacaggagaaagagggt-------tgtaggggat-----g i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5916335 85 - 181584905 GC------TGGAGGGATGGAGGGAG----------------GAAGT------------ATAgatgacaatgccatttgcttagctgaagaccacaggagaaagagggt-------tgtaggggat-----g i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 945396 85 - 16193990 GC------TGGAGGGATGGAGGGAG----------------GAAGT------------ATAGATGACAATGCCATTTGCTTAGCTGAAGACCACAGGAGAAAGAGGGT-------TGTAGGGGAT-----G i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1762417 85 - 21434487 GC------TGGAGGGATGGAGGGAG----------------GAAGT------------ATAgatgacaatgccatttgcttagctgaagaccacaggagaaagagggt-------tgtaggggat-----g i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4731312 85 - 82825804 GC------TGGAGGGATGGAGGGAG----------------GAAGT------------ATAgatgacaatgccatttgcttagctgaagaccacaggagaaagagggt-------tgtaggggat-----t i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 226622 85 + 2521317 GC------TGGAGGGATGGAGGGAG----------------GAAGT------------ATAgatgacaatgccatttgcttagctgaagaccacaggagaaagagggt-------tgtaggggat-----g i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1717688 85 - 2415367 GC------TGGAGGGATGGAGGGAG----------------GAAGT------------ATAgatgacaatgccatttgcttagctgaagaccacaggagaaagaggct-------tgtaggggat-----g i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64059617 80 + 204313951 GGTGT---GGGGGGGATGGAAGGG------------------GGTT------------ATAG--GACAATGCCATTTGCTTA----AAGACTACAGGAGAAAGAGGGT-------TGCAGAGGAT-----G i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2188185 87 + 10068113 GGTGTGGGGGGGGGGATGGAAGGAG----------------CGGGT------------ATAGGTGACAATGCCATTTGCTTA----AAGACTAGAGTAGAAAGAGGGT-------TGTGGGGGAT-----G i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 43312 84 - 709587 GGTGC---GGGGGGGATGGAAGGAG----------------GGGGT------------ATAGATGACAATGCCATTTGCTTA----aagactagaggagaaagagggt-------tgtggcgaat-----g i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1144240 87 - 2246441 GGTGCGGGGGGCGGGATGGAAGGAG----------------GGGGT------------ATGGAGGACAATGCCATTTGCTTA----AAGACTACAGGAGAAAGAGGGT-------TGTGGGGGAT-----G i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1215169 71 + 48283576 -------------GGGTGAA----------------------------------------AGATGACAATGCCATTTTCTTGATTAACGACCACAGTAAGAAGAGGAT-------TTGGGGGGACGGGAGG i otoGar3.GL873522 C 0 C 0 s mm10.chr13 65979021 51 - 120421639 -----------------------------------------------------------GCCATGGCGATGTCCTTT---------AAGACCACAGTGGGGAAAGGAC-------TTTTGTGGGT-----G i mm10.chr13 C 0 C 0 s canFam3.chr4 37162360 98 + 88276631 ---------agaggagtcagagaagact-----------ctgagatgtctgatgcatgataggt-acaaggccatttgctaagttcaagaccgcaggaggaagaggat-------tttttggggt-----g i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 238440 93 - 960158 ------gagggaggagttagagaagactgatatgtctgactgagtg------------acaggtgacaatgccatt---------------cacaaaaggaagaatgtatgtgtgtgtggggaag-----g i dasNov3.JH562710 C 0 I 405 e proCoq1.NW_012152163v1 722602 123 - 940639 I a score=97607.000000 s hg38.chr5_KI270795v1_alt 31172 11 + 131892 ctgcaacagta s panTro5.chr5 5279717 11 - 181907262 ctgcaacagta i panTro5.chr5 C 0 C 0 s panPan2.chr5 5542102 11 - 183735486 ctgcaacagta i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1673933 11 + 3967317 ctgcaacagta i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4491879 11 + 163208435 ctgcaacagta i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5730614 11 - 180051392 ctggaacagta i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5916420 11 - 181584905 ctggaacagta i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 945481 11 - 16193990 CTGGAACAGTA i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1762502 11 - 21434487 ctggaacagta i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4731397 11 - 82825804 ctggaacagta i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 226707 11 + 2521317 ctggaacagta i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1717773 11 - 2415367 ctggaacagta i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64059697 10 + 204313951 CTGGAACAG-A i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2188272 10 + 10068113 CTGGAACAG-A i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 43396 10 - 709587 ctggaacag-a i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1144327 10 - 2246441 CTGGAACAG-A i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1215240 11 + 48283576 CAGGAACAATA i otoGar3.GL873522 C 0 C 0 s mm10.chr13 65979072 6 - 120421639 -----GGAGTG i mm10.chr13 C 0 C 0 s canFam3.chr4 37162458 11 + 88276631 cgggaacaatt i canFam3.chr4 C 0 C 0 e proCoq1.NW_012152163v1 722602 123 - 940639 I e dasNov3.JH562710 238533 405 - 960158 I a score=821041.000000 s hg38.chr5_KI270795v1_alt 31183 62 + 131892 atgcattcagttttagacgagctgcattcgaggtgtctgtgggatagctggggagacgttga s panTro5.chr5 5279728 62 - 181907262 atgcattcagttttagacgagctgcattcgaggtgtctgtgggatagctggggaaacattga i panTro5.chr5 C 0 C 0 s panPan2.chr5 5542113 62 - 183735486 atgcattcagttttagacgagctgcattcgaggtgtctgtgggatagctggggaaacattga i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1673944 62 + 3967317 atgcattcagttttagacgagctgcattcgaggtgtctgtgggatagctggggaggcattga i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4491890 62 + 163208435 atgcattcagttttagacgagctgcatttgaggcgtctgtgggatagctggggagacattta i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5730625 62 - 180051392 atgcattcagttttagacgagctgcatgtgaggtgtctgtgggatcgctggggagacattta i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5916431 62 - 181584905 atgcattcagttttagacgagctgcatgtgaggtgtctgtgggatcgctggggagacattta i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 945492 62 - 16193990 ATGCATTCAGTTTTAGACGAGCTGCATGTGAGGTGTCTGTGGGATCGCTGGGGAGACATTTA i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1762513 62 - 21434487 atgcattcagttttagacgagctgcatttgaggtgtctgtgggatcactggggagacattta i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4731408 62 - 82825804 atgcattcagttttagacaagctgcatttgaggtgtctgtgggatcgctggggagacattta i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 226718 62 + 2521317 atgcattcagttttagacgagctgcatttgaggtgtctgtgggatcactggggagacattta i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1717784 62 - 2415367 atgcattcagttttagacaagctgcattcgaggtgtctgtgggattgctggggagacattta i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64059707 62 + 204313951 ATGCATTCAGTTTTAGATGAGCTGCTTTCGAGGTGTCTGTGGGATAGCTGGGGAGACATTTA i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2188282 62 + 10068113 ATGCATTCAGTTTTAGATGAGCTGCATTTGAGGTGTCTGTGGGATAGCTGGGGAGACATTTA i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 43406 62 - 709587 atgcattcagttttagacgagctgcatccgaggtgtctgtgggatagctggggagacattta i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1144337 62 - 2246441 ATGCATTCAGTTTTAGACGAGCTGCGTTCGAGGTGTCTGTGGGATAGCTGGGGAGACATTTA i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1215251 62 + 48283576 TTACATTCAGTTGTAGACATGTGGTCTTTTAGGTATCTGTGGGACATCTGGGGAGCCATCTA i otoGar3.GL873522 C 0 C 0 s mm10.chr13 65979078 46 - 120421639 ATTAACTTAATTTT----------------AGGACTCTGCAGAAACACTGAGAGGAGAGCTG i mm10.chr13 C 0 C 0 s canFam3.chr4 37162469 62 + 88276631 atgcattcatttttagttgtgctgcttttgaggcatctgtgtgatagctggggagacatgta i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 238938 62 - 960158 atgtgttcccttttagacatattgcttttgaaatgtctgtgagatagttggggagacatcta i dasNov3.JH562710 I 405 C 0 e proCoq1.NW_012152163v1 722602 123 - 940639 I a score=3076049.000000 s hg38.chr5_KI270795v1_alt 31245 278 + 131892 ggatgca-gttaatt-ataggatctggagctt--gtgagagat-ggggc-----tgggg--G-GAGCCAGTGAGACAT-CTGGAGT---GTGGAGAGTGCTGACTGCGCGCAGAGC------AGCAGAGGCAAAGCCGGAGTGGAGGCCT-GGCATGGACCTTC----TTATTAAA-GGCATGGACCTTCTGGACTGCAGCAGGCTGTCCCAGAGAGGGAG--GAGAGCGAGGAG--T------GTGTGAAttttgctaattgtactgtggttatgtacactgttggcattagggggatctgagggaagggt-gtttg s panTro5.chr5 5279790 278 - 181907262 ggatgca-gttaatt-ataggatctggagctt--gtgagagat-ggggc-----tgggg--G-GAGCCAGTGAGACAT-CTGGAGT---GTGGAGAGTGCTGACTGCGCGCGGAGC------AGCAGAGGCAAAGCCGGAGCGGAGGCCT-GGCATGGACCTTC----TTATTAAA-GGCATGGACCTTCTGGACTGCAGCAGGCTGTCCCAGAGAGGGAG--GAGAGCGAGGAG--T------GTGTGAAttttgctaattgtactgtggttatgtacactgttggcattagggggatctgagggaagggt-gtttg i panTro5.chr5 C 0 C 0 s panPan2.chr5 5542175 278 - 183735486 ggatgca-gttaatt-ataggatctggagctt--gtgagagat-ggggc-----tgggg--G-GAGCCAGTGAGACAT-CTGGAGT---GTGGAGAGTGCTGACTGCGCGCAGAGC------AGCAGAGGCAAAGCCGGAGCGGAGGCCT-GGCATGGACCTTC----TTATTAAA-GGCATGGACCTTCTGGACTGCAGCAGGCTGTCCCAGAGAGGGAG--GAGAGCGAGGAG--T------GTGTGAAttttgctaattgtactgtggttatgtacactgttggcattagggggatctgagggaagggt-gtttg i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1674006 278 + 3967317 ggatgca-gttaatt-ataggatctggagctt--gtgagagat-ggggc-----tgggg--G-GAGCCAGTGAGACAT-CTGGAGT---GTGGAGAGTGCCGACTGCGCGCAGAGC------AGCAGAGGCAAAGCCGGAGTGGACGCCT-GGCATGGACCTTC----TTATTAAA-GGCATGGACCTTCTGGACTGCAGCAGGCTGTCCCAGAGAGGGAG--GAGAGCGAGGAG--T------GTGTGAAttttgctaattgtactgtggttatgtacactgttggcattagggggatctgagggaagggt-gtttg i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4491952 279 + 163208435 ggatgca-gttaatt-ataagatctggagctt--gtgagagatgggggc-----tgggg--G-GAGCCAGTGAGACAT-CTGGAGT---GTGGAGAGTGCCGATTGCGCGCAGAGC------AGCAGAGGCAAAGCTGGAGTGGAGGCCT-GGCATGGACCTTC----TTATTAAA-GGCATGGACCTTCTGGACTGCAGCAGGCTGTCCCACAGAGGGAG--GAGAGCGAGGAG--T------GTGTGAAttttgctaattgtactgtggttatgtacactgttggcattagggggatctgagggaagggt-atttg i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5730687 261 - 180051392 ggacaca-gttagtt-ataggatctggagctt--gtgagaggt-ggggc-----tgggg--a-GAGCCAGTAAGACAT-CTGGAGT---GTAGAGAGTGCGGATTGCACgcagagcagagcaagcagaggcaaagcTGGAGTGGAGGCCC---------------------------GGCATGGACCTTCTGGACTGCGGCAGGCTGTCCCAGGGAGGGAG--GAGA--GAGGAG--T------GTGTGAAttttgataattgtactgtggttatgtacactgttgacattagagggatctgagggaagggc-atttg i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5916493 261 - 181584905 ggacaca-gttaatt-ataggatctggagctt--gtgagaggt-ggggc-----tgggg--a-GAGCCAGTAAGACAT-CTGGAGT---GTAGAGAGTGCGGATTGCACgcagagcagagcaagcagaggcaaagcTGGAGTGGAGGCCC---------------------------GGCATGGACCTTCTGGACTGCGGCAGGCTGTCCCAGGGAGGGAG--GAGA--GAGGAG--T------GTGTGAAttttgataattgtactgtggttatgtacactgttgacattagagggatctgagggaagggc-atttg i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 945554 261 - 16193990 GGACACA-GTTAATT-ATAGGATCTGGAGCTT--GTGAGAGGT-GGGGC-----TGGGG--A-GAGCCAGTAAGACAT-CTGGAGT---GTAGAGAGTGCGGATTGCACgcagagcagagcaagcagaggcaaagcTGGAGTGGAGGCCC---------------------------GGCATGGACCTTCTGGACTGCGGCAGGCTGTCCCAGGGAGGGAG--GAGA--GAGGAG--T------GTGTGAAttttgataattgtactgtggttatgtacactgttgacattagagggatctgagggaagggt-atttg i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1762575 261 - 21434487 ggacaca-gttaatt-ataggatctggagctt--gtgagaggt-ggggc-----tgggg--a-GAGCCAGTAAGACAT-CTGGAGT---GTagagagtgcagattgcatgcagagcagagcaagcagaggcaaagcTGGAGTGGAGGCCC---------------------------GGCATGGACCTTCTGGACTGCGGCAGGCTGTCCCAGGGAGGGAG--GAGA--GAGGAG--T------GTGTGAAttttgacagttgtactgtggttatgtacactgttgacattagagggatctgagggaagggt-atttg i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4731470 263 - 82825804 ggacaca-gttaatt-ataggatctggagctt--gtgagaggt-ggggc-----tgggg--a-GAGCCAGTAAGACAT-CTGGAGT---GTAGAGAGTGCGGATTGCACgcagagcagagcaagcagaggcaaagcTGGAGTGGAGGCCC---------------------------GGCGTGGACCTTCTGGACCGCAGCAGGCTGTCCCAGGGAGGGAGGAGAGA--GAGAAG--T------GTGTGAAttttgataattgaactgtggttatgtacactgttgacattagagggatctgagggaagggt-atttg i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 226780 261 + 2521317 ggacaca-gttaatt-ataggatctggagctt--gtgagaggt-ggggc-----tgggg--a-GAGCCAGTAAGACAT-CTGGAGT---GTagagagtgcagattacatgcagagcagagcaagcagaggcaaagcTGGAGTGGAGGCCC---------------------------GGCATGGACCTTCTGGACTGCGGCAGGCTGTCCCAGGGAGGGAG--GAGA--GAGGAG--T------GTGTGAAttttgacaattgtactgtggttatgtacactgttgacattagagggatctgagggaagggt-atttg i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1717846 258 - 2415367 ggacgca-gttaatt-ataggatctggaactt--gtgagaggt-ggggc-----tgggg----GAGCTGGTAAGACAC-CTGGAGT---GT--AGAGTGCGGATTGCACgcagagcagagcaagcagaggcaaagcTGGAGTGGAGGCCT---------------------------GGCATGGACCTTCTGGACCGCAGCAGGCTGTCCCAGGGAGGGAG--GAGA--GAGGAG--T------GTGTGAAttttgacaattgtgctgtggttatgtacactgttgacattagagggatctgagggaagggt-atttg i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64059769 253 + 204313951 GGACACA-GTTAATT-ATAGGATATGTAGCTT--GTGAGAGAT-GGGGC-----TGGGG--G-GAGCCGGTGAGACAT-CTGGAGT---GTGGAGAGTGCCAACTGCGCACAGAGCAGAGC-AGCA-------------------------------GACTGTC----TTACTAGA-GGCATGCACCTTCAGGACTGCAGCAGGCTGTCCCACAGAGGGAG--GAGAGCGAGGAG--T------GTGTGgatttcggtaattgtactatggttacatacactgttgacatgagggagatctaggggaagggt-atttg i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2188344 273 + 10068113 AGACACA-GTTAATT-ATAGGATCTGGAGCTC--GTGAGAGAT-GGGCC-----TGGGG--G-GAGCCGGTGAGACAT-CTGGAGT---GTGGAGAGTGCCAGCTGTGCACAGAGCAGGGC-AGCAGACACAAAGCTGGAGCGGAGGCCT-GGCATGGACCTTC----TTACTAGA-GGCACGCACCTTCAGGACTGCAGCAGGCTGCCCCAGAGAGGGAG--GAGAGCGAGGAG---------GTGTGAAtttcgataattgtactatggttacatacactgttgacacgag---------ggggcaaggt-atttg i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 43468 285 - 709587 ggacaca-gttaatt-ataggatctggagctt--gtgagagtt-ggggc-----tgggg--G-GAGCCGGTGAGACAT-CTGGAGT---GTGGAGAGTGCCAACTGCGCACAGAGCAGAGC-AGCAGACACAAAGCTGGAGTGGAGGCCT-GGCATGGACCTTC----TTACTAGA-GGCATGCACCTTCAGGACTGCAGCAGGCTGTCCCAGAGAGGGAG--GAGAGTGAGGAGTGT------GTGTGAAtttcgataattgtactatggttacatacactgttgacatgagggggatctaggggaagggt-atttg i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1144399 283 - 2246441 GGACACA-GTTAATT-ATAGGATCTGGAGCTT--GTGAGAGAT-GGGGC-----TGGGG--G-GAGCTGATGAGACAT-CTGGAGT---GTGGAGAGTGCCAACTGCACACAGAGCAGAGC-AGCAGGCACAAAGCTGGAGTGGAGGCCT-GGCATGGACCATC----TTACTAGA-GGCATGCACCTTTAGGACTGCAGCAGGCTGTCCCAGAGAGGGAG--GAGAGCGAGGAG--T------GTGTGAAtttcgataattgtactatggttacatacactgttgacatgagggggatctaggggaagggt-attta i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 722725 285 - 940639 GGATGCA-GTTAGTT-GTAGGGTCTGGAGCTT--GTGGGAGAT-GGGGC-----TGGGG--G-GAGGTAGGAAGACGT-CCAGAGT---CTGAAGAGTGTCAAGTGCATGCAGAGC------AGCAGACATAAGGCTGGAGTGGAGGCCA-GGCCTAGACTGAC----TTATTCGAGGGGAAGGACCTTTTGGACTGCAGCAGGCTGTTCCGGAGAGGTGG--AAAAGGGAGGAG--TAAAACCATGTGGACtttgatagttgtcccttggttatgtctgttgttgacattagggggaactgggtgaagggt-attca i proCoq1.NW_012152163v1 I 123 C 0 s otoGar3.GL873522 1215313 280 + 48283576 GGAGGCA-GTTAGTT-ATGGGATCTGGAGAT----TGGGAGAT-GGGGC----TTGGAG--G-GAAGAAGGA--GTGA-CCAGAGT---CTGAAGAGTGTCAGTTGCATGCAGAGC------AGCAGACAGA--GCTGGAGTGGAGGCCA-GGCCTAGACCAGG----TTATTGGAGGGGATGGACCCTTCAGACTGCAATAGGGCATCCTGGAAAGGTGG--AGGAGGGAGAAG--TAAAACCGTGTGCACtttgatagttgtcccatggttatgcacattgttgacattagggggaggtgggtgaagggt-attca i otoGar3.GL873522 C 0 C 0 s mm10.chr13 65979124 260 - 120421639 GGAGGTATGTTAGTT-TTAAGACCCGAAACTTCAGCAAGATGT-GGGGAAGTTATCGGT--G-AAGATGGAGAGA-----TGGAGCTGAGTGGAGAGT---CACTGCACACAGAGC------GGCA--------GCTGGCATGGAGGCTG-------GAGCTTC----T--------TGGGGGAGTTCTCTGGTCAGCAATAGTCAGT-CTAGAGAAGGAC--AGAAGGATGAAA--CA-----GTGAAGACtttgatgattgtactatggttacatctgttgtt-acattagaggaagctgggtgaaggat-TTGTG i mm10.chr13 C 0 I 6914 s canFam3.chr4 37162531 257 + 88276631 ggatgca-gttagct-gtaggatctggaggta--atgagagat-ggggc-----tggaATTG-AACATGGTAAGCTGT-CCGAAAT---GTG--GAGTGTTGACTGC---------------AGCAGGCATAAAGCTGGAGCTGAGGCCAGGGCCTAGACCTTC----TTACTGGAGAGGACTGGTCTTTTGGACTACAGTAGGCTGCCCTAGAGAAGAAG--AGGA------AG--T------G-GTGAAATT------Gtgtac-attcttacgtaagttgttaacatcagtgggg-ctgggtgaatgataatttg i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 239000 256 - 960158 ggataga-ggtagttaaaaggatctggagctt--gtggaagat-ggggc-----tggga--gtgaagatgtgagaTGTGTTTGTGT---GTGGAGAGTGTGGATTGCACACAGAGC------AGCAGACATAAAGGTGGAGTGGAGGCCAGGGCCTAGACATACCACATTATTCTA-ACCGTTCCTCTTCT-----------GCCTCTCTT------------GGAA----------A------ATGTGGAttttgatcattataccaaga-tatgtaagatgttaaaattaggagaagctgggtgatgggt-atttg i dasNov3.JH562710 C 0 C 0 a score=332613.000000 s hg38.chr5_KI270795v1_alt 31523 26 + 131892 gaaataatgtgtgttgtctttgcaac s panTro5.chr5 5280068 26 - 181907262 gaaataatgtgtgttgtctttgcaac i panTro5.chr5 C 0 C 0 s panPan2.chr5 5542453 26 - 183735486 caaataatgtgtgttgtctttgcaac i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1674284 26 + 3967317 gaaataatgtgtgttgtctttgcaac i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4492231 26 + 163208435 gaaataatgtgtgttgtctttgcaac i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5730948 26 - 180051392 gaaatcatgtgtgttgtctttgcaac i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5916754 26 - 181584905 gaaatcatgtgtgttgtctttgcaac i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 945815 26 - 16193990 gaaatcatgtgtgttgtctttgcaac i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1762836 26 - 21434487 gaaataatgtgtgtcctctttgcaac i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4731733 26 - 82825804 gaaatcttgtgtgttgtctttgcaac i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 227041 25 + 2521317 gaaataatgtgtgtcctc-ttgcaac i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1718104 26 - 2415367 gaaataatgtgtgttgtctttgcaac i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64060022 26 + 204313951 gaaatgatgtgtgttgtctttgcaat i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2188617 26 + 10068113 gaaatgatgtgtgttgtctttgcaac i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 43753 26 - 709587 aaaatgatgtgtgttgtctttgcaac i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1144682 26 - 2246441 gaaatgatatgtgttgtctttacaac i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 723010 26 - 940639 gaaacaatctgtgctgtctttgcaat i proCoq1.NW_012152163v1 C 0 C 0 s otoGar3.GL873522 1215593 26 + 48283576 gaaaaaaattgtgctgcctttgcaat i otoGar3.GL873522 C 0 C 0 s canFam3.chr4 37162788 24 + 88276631 gaaac--tctgtgtcatctttgcaat i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 239256 20 - 960158 gaaac------tgctgtctttgcaac i dasNov3.JH562710 C 0 I 442 e mm10.chr13 65979384 6914 - 120421639 I a score=114968.000000 s hg38.chr5_KI270795v1_alt 31549 8 + 131892 acttctgt s panTro5.chr5 5280094 8 - 181907262 acttctgt i panTro5.chr5 C 0 C 0 s panPan2.chr5 5542479 8 - 183735486 acttctgt i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1674310 8 + 3967317 acttctgt i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4492257 8 + 163208435 acttctgt i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5730974 8 - 180051392 acttctgt i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5916780 8 - 181584905 acttctgt i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 945841 8 - 16193990 acttctgt i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1762862 8 - 21434487 acttctgt i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4731759 8 - 82825804 acttctgt i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 227066 8 + 2521317 acttctgt i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1718130 8 - 2415367 acttctgt i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64060048 8 + 204313951 acttctct i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2188643 8 + 10068113 acttctgt i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 43779 8 - 709587 acttctgt i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1144708 8 - 2246441 acttttgt i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 723036 8 - 940639 gcttctgt i proCoq1.NW_012152163v1 C 0 C 0 s otoGar3.GL873522 1215619 8 + 48283576 gcttctgt i otoGar3.GL873522 C 0 C 0 s canFam3.chr4 37162812 8 + 88276631 tcttctgt i canFam3.chr4 C 0 C 0 e mm10.chr13 65979384 6914 - 120421639 I e dasNov3.JH562710 239276 442 - 960158 I a score=265899.000000 s hg38.chr5_KI270795v1_alt 31557 20 + 131892 aagtgtaagataatttcaaa-- s panTro5.chr5 5280102 20 - 181907262 aagtgtaagataatttcaaa-- i panTro5.chr5 C 0 C 0 s panPan2.chr5 5542487 20 - 183735486 aagtgtaagataatttcaaa-- i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1674318 20 + 3967317 aagtgtaagataatttcaaa-- i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4492265 20 + 163208435 aagtgtaagataatttcaaa-- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5730982 20 - 180051392 aagtgtaagattatttcaaa-- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5916788 20 - 181584905 aagtgtaagattatttcaaa-- i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 945849 20 - 16193990 aagtgtaagattatttcaaa-- i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1762870 20 - 21434487 aagtgtaagattatttcaaa-- i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4731767 20 - 82825804 aagtgtaagattatttcaaa-- i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 227074 20 + 2521317 aagtgtaagattatttcaaa-- i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1718138 20 - 2415367 aagtgtaagattatttcaaa-- i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64060056 20 + 204313951 aagtgtaagattatttcaaa-- i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2188651 20 + 10068113 aactgtaagattatttccaa-- i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 43787 20 - 709587 aactgtaagattatttcaaa-- i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1144716 20 - 2246441 aagtgtaagattatttcaaa-- i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 723044 20 - 940639 aagtgtaaaattatttcaaa-- i proCoq1.NW_012152163v1 C 0 I 31128 s otoGar3.GL873522 1215627 20 + 48283576 aagtgtgaagttaattcaga-- i otoGar3.GL873522 C 0 I 26 s canFam3.chr4 37162820 20 + 88276631 aagtgtaaaattatttaaaa-- i canFam3.chr4 C 0 I 28 s dasNov3.JH562710 239718 15 - 960158 AAGTTTAAAA-------AAAGA i dasNov3.JH562710 I 442 C 0 e mm10.chr13 65979384 6914 - 120421639 I a score=537098.000000 s hg38.chr5_KI270795v1_alt 31577 58 + 131892 CCAGAAGTA------------------------GATTGTACTGGGTGCAGCAGTGCCTGCTTTACTCC-TGTGTTATGttttt- s panTro5.chr5 5280122 58 - 181907262 CCAGAAGTA------------------------GATTATACTGGGTGCAGCAGTGCCCGCTTTACTCC-TGTGTTATGttttt- i panTro5.chr5 C 0 C 0 s panPan2.chr5 5542507 58 - 183735486 CCAGAAGTA------------------------GATTATACTGGGTGCAGCAGTGCCCGCTTTACTCC-TGTGTTATGttttt- i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1674338 58 + 3967317 CCAGAAGTA------------------------GATTGTACTGGGTGCAGCAGTGCCTGCTTTACTCA-TGTGTTATGTTTTT- i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4492285 58 + 163208435 CCAGAAGTA------------------------GATTGTACTGGGTGCAGCAGTGCCTGCTTTACTCA-TGTGTTATGttttt- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5731002 80 - 180051392 ataaaggtaaaaaaCA-AAAACAAACAGAAGT-GATTGTACTGGGTGCAGCAGTGCCTCCTTTACTCG-TGTGTTATGttttc- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5916808 80 - 181584905 ataaaggtaaaaaaCA-AAAACAAACAGAAGT-GATTGTACTGGGTGCAGCAGTGCCTCCTTTACTCG-TGTGTTATGttttc- i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 945869 80 - 16193990 ataaaggtaaaaaaCA-AAAACAAACAGAAGT-GATTGTACTGGGTGCAGCAGTGCCTCCTTTACTCA-TGTGTTATGttttc- i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1762890 76 - 21434487 ataaaagtaaaaaaCA-A----AAACAGAAGT-GATTGTACTGGGTGCAGCAGTGCCTCCTTTACTCA-TGTGTTATGttttc- i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4731787 80 - 82825804 ataaaagtaaaaaaCA-AAAACAAACAGAAGT-GATTGTACTGCGTGCAGCAGTGCCTTTTTTACTCA-TGTGTTATGttttt- i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 227094 80 + 2521317 ataaaagtgaaaaaCA-AAAACAAACAGAAGT-GATTGTACTGGGTGCAGCAGTGCCTCCTTTACTCA-TGTGTTATGttttc- i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1718158 71 - 2415367 ataaaagtaaaaaa--------aACCAGAAGT-GATTGTACTGGGTGCAGCAGTGCCTCCTTTACT---TGTGTTATGttttt- i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64060076 83 + 204313951 ataaaagtaaaaaaaAGAAAAAGACCGGAAGTAGATTGTACTGGGTGCAGCAGTGCCTCCTTTATTCATTGTGTTATGTTTTT- i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2188671 80 + 10068113 ataaaagctaaaaa---aAAAAGATCGAAAGTAGATTGTACTAGGTGCAGCAGTGCCTCCTTTATTCATTGTGTTATGTTTTT- i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 43807 83 - 709587 ataaaagttaaaaaaAAAAAAAGACCGGAAGTAGATTGTACTGGGTGCAGCAGTGCCTCGTTTATTCACtgtgttatgttttt- i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1144736 79 - 2246441 ataaaagttaaaa----aaAAAGACTGGAAGTAGATTGTACTGGGTGCAGCAGTGCCTCCTTTATTCATTGTGTTATGTTTTT- i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1215673 51 + 48283576 ------------------------CCAGAAGT-GGGTGTACTGGGTACAGCAGTG------GTATGCA-TGTGGTATCTTTTT- i otoGar3.GL873522 I 26 I 8145 s canFam3.chr4 37162868 57 + 88276631 ------------------------CCTGAAGTGAATTGTACTGGATGTAGCAGTG-ATCCTTTATATA-AGCATTATCTTTTT- i canFam3.chr4 I 28 I 9 s dasNov3.JH562710 239733 50 - 960158 ------------------------CCTGAAGTGGGTTGTACTGAGTGCAGCAGGACATCCTTTATGCt----------ttttta i dasNov3.JH562710 C 0 C 0 e mm10.chr13 65979384 6914 - 120421639 I e proCoq1.NW_012152163v1 723064 31128 - 940639 I a score=6086.000000 s hg38.chr5_KI270795v1_alt 31635 1 + 131892 a s panTro5.chr5 5280180 1 - 181907262 a i panTro5.chr5 C 0 C 0 s panPan2.chr5 5542565 1 - 183735486 a i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1674396 1 + 3967317 A i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4492343 1 + 163208435 a i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5731082 1 - 180051392 a i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5916888 1 - 181584905 a i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 945949 1 - 16193990 a i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1762966 1 - 21434487 a i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4731867 1 - 82825804 a i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 227174 1 + 2521317 a i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1718229 1 - 2415367 a i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64060159 1 + 204313951 G i calJac3.chr2 C 0 I 3 s saiBol1.JH378186 2188751 1 + 10068113 G i saiBol1.JH378186 C 0 I 3 s cebCap1.NW_016107999v1 43890 1 - 709587 g i cebCap1.NW_016107999v1 C 0 I 3 s aotNan1.NW_018501968v1 1144815 1 - 2246441 G i aotNan1.NW_018501968v1 C 0 I 13 s dasNov3.JH562710 239783 1 - 960158 a i dasNov3.JH562710 C 0 C 0 e mm10.chr13 65979384 6914 - 120421639 I e otoGar3.GL873522 1215724 8145 + 48283576 I e canFam3.chr4 37162925 9 + 88276631 I e proCoq1.NW_012152163v1 723064 31128 - 940639 I a score=63684.000000 s hg38.chr5_KI270795v1_alt 31636 8 + 131892 aatgcctt s panTro5.chr5 5280181 8 - 181907262 aatgcctt i panTro5.chr5 C 0 C 0 s panPan2.chr5 5542566 8 - 183735486 aatgcctt i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1674397 8 + 3967317 AATGCCTT i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4492344 8 + 163208435 aatgcctt i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5731083 8 - 180051392 aatgcctt i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5916889 8 - 181584905 aatgcctt i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 945950 8 - 16193990 aatgcctt i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1762967 8 - 21434487 aatgcctt i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4731868 8 - 82825804 aatgcctt i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 227175 8 + 2521317 aatgcctt i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1718230 8 - 2415367 aatgcctt i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64060163 8 + 204313951 AAGGTTTT i calJac3.chr2 I 3 I 2 s saiBol1.JH378186 2188755 8 + 10068113 AATGTTTT i saiBol1.JH378186 I 3 I 2 s cebCap1.NW_016107999v1 43894 8 - 709587 aatgtttt i cebCap1.NW_016107999v1 I 3 I 2 s canFam3.chr4 37162934 7 + 88276631 acagctt- i canFam3.chr4 I 9 C 0 s dasNov3.JH562710 239784 8 - 960158 aataacat i dasNov3.JH562710 C 0 C 0 e mm10.chr13 65979384 6914 - 120421639 I e otoGar3.GL873522 1215724 8145 + 48283576 I e proCoq1.NW_012152163v1 723064 31128 - 940639 I e aotNan1.NW_018501968v1 1144816 13 - 2246441 I a score=3224234.000000 s hg38.chr5_KI270795v1_alt 31644 302 + 131892 -ttttgatttacatattgacatgcaataaattacacatgttgaaagtgtgtgataagcatacgatagtttgataagttttgacatacatattctc--------tcatgaaacccatcactgcagtcagggtagtgaatacacctgtcacttacagacagttcctcatatctccttgtcatttctctctgtgcctgcacctctccctgcaatagacaactgctgatctgctttgcgttactgt-ggttagtttg----tctagagttttgtataaatggaatcatacagcatgtactctt---------ttTAA--------AATTATTACTTA---- s panTro5.chr5 5280189 303 - 181907262 -ttttgatttacatattgacatgcaataaattacacatgttgaaagtgtgtgataagcatacgatagtttgataagttttgacatacatattctc--------tcatgaaacccatcactgcagtcagggtagtgaatacacctgtcacttacagacagttcctcatatctccttgtcattcctctctgtgcctgcacctctccctgcaatagacaactgctgatctgctttgcgttactgtaggttagtttg----tctagagtttcgtataaatggaatcatacagcatgtactctt---------ttTAA--------AATTATTACTTA---- i panTro5.chr5 C 0 C 0 s panPan2.chr5 5542574 303 - 183735486 -ttttgatttacatattgacatgcaataaattacacatgttgaaagtgtgtgataagcatacgatagtttgataagttttgacatacatattctc--------tcatgaaacccatcactgcagtcagggtagtgaatacacctgtcacttacagacagttcctcatatctccttgtcattcctctctgtgcctgcacctctccctgcaatagacaactgctgatctgctttgcgttactgtaggttagtttg----tctagagtttcgtataaatggaatcatacagcatgtactctt---------tttaa--------aattattactta---- i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1674405 303 + 3967317 -TTTTGATTTACATattgacatgcaataaattacacatgttgaaagtgtgtgataagcatacgatagtttgataagttttgacatacatattctc--------tcatgaaacccatcactgcagtcagggtagtgaatacacctgtcacttacagacagttcctcatatctccttgtcattcctctctgtgcctgcacctctccctgcaatagacaactgctgacctgctttgcgttactgtaggttagtttg----tctagagtttcgtataaatggaatcatacagcatgtactctt---------ttTAA--------AATTATTACTTA---- i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4492352 301 + 163208435 -ttttgatttacatattgacatgcaataaattacac--gtttaaagtatgtgataagcatacgatagtttgataagttttgacatacgtattctc--------tcatgaaacccatcactgcagtcagggtagtgaatacacctgtcacttacagacagttcctcatgtctccttgtcattcctctctgtgcctgcacctctccctgcaatagacaactgctgatctgctttgcgtcactgtaggttagtttg----tctagagttgcatatcaatggaatcatacagcatgtactctt---------ttTAA--------AATTATTACTTA---- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5731091 301 - 180051392 -tt-tgatgtacatattgacatacaataaactacacatatttaaagtgtatgataagcatacgatagtttgataagtttttacatacgtattttc--------ttatgaaacccatcactgcagtcagggtagtgaatatacctgtcatccacagacaattcctcatgtccccttgtcatttctttctgtgcctgcacctctccctgcaatagacaactgct-atctgctttgcgtcactgtaggttagtttg----tctagagtttcgtataaatggaatcatatagcatgtactgtt---------ttttA--------AATTATTACTTT---- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5916897 301 - 181584905 -tt-tgatgtacatattgacatacaataaactacacatatttaaagtgtatgataagcatacgatagtttgataagtttttacatacgtattttc--------ttatgaaacccatcactgcagtcagggtagtgaatatacctgtcatccacagacaattcctcatgtccccttgtcatttctttctgtgcctgcacctctccctgcaatagacaactgct-atctgctttgcgtcactgtaggttagtttg----tctagagtttcgtataaatggaatcatatagcatgtactgtt---------ttTTA--------AATTATTACTTT---- i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 945958 301 - 16193990 -tt-tgatgtacatattgacatacaataaactacacatatttaaagtgtatgataagcatacgatagtttgataagtttttacatacgtattttc--------ttatgaaacccatcactgcagtcagggtagtgaatatacctgtcatccacagacaattcctcatgtccccttgtcatttctttctgtgcctgcacctctccctgcaatagacaactgct-atctgctttgcgtcactgtaggttagtttg----tctagagtttcgtataaatggaatcatatagcatgtactgct---------tttTA--------AATTATTACTTT---- i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1762975 301 - 21434487 -tt-tgatgtacatattgacatacaataaactacacatatttaaagtgtatgataagcataggatagtttgataagtttttacatatgtattttc--------ttatgaaacccatcactgcagtcagggtagtgaatacacctgtcacccacagacaattcctcatgtctccttgtcatttctttctgtgcctgcacctctccctgcaatagacaactgct-atctgctttgcgtcactgtaggttagtttg----tctagagtttcgtataaatggaatcatatagcatgtactgtt---------ttttA--------AATTATTACTTT---- i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4731876 302 - 82825804 -ttctgatgtacatattgacatacaataaactacacgtatttaaagtgtatgataagcatacgatagtttgataagtttttacatacgtattttc--------ttatgaaacccatcactgcagtcagggtagtgaatacacctgtcacccatagacaattcctcatgtctccttgtcattcctttctgtgcctgctcctctccctgcaatagacaactgct-atctgctttgcatcactgtaggttagtttg----tctagagtttcacataaatggaatcatatagcatgtactgtt---------ttTTA--------AATTATTACTTT---- i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 227183 301 + 2521317 -tt-tgatgtacatattgacatacaataaactatacatatttaaagtgtatgataagcatacgatagtttgataagtttttacatacgtattttc--------ttatgaaacccatcactgcagtcagggtagtgaatacacctgtcacccacagacaattcctcatgtctccttgtcatttctttctgtgcctgcacctctccctgcaatagacaactgct-atctgctttgcgtcactgtaggttagtttg----tctagagtttcgtataaatggaatcatatagcatgtactgtt---------ttttA--------AATTATTACTTT---- i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1718238 297 - 2415367 -ttttgatgtacatattgacatataataaactacatgt-----aagtgtatgataagcatacgatagtttggtaagtttttacatacgtattttc--------ttatgaaactcatcactgcggtcagggtagtgaatacgcctgtcacccacagacaattccttatgtctccttgtcattcctttctgtgcctgcacctctccctgcaatagacaagtgct-atctgctttgcgtcactgtaggttagtttg----tctagagtttcatgtaaatggaatcatatagcatgtactgtt---------ttttA--------AATTATTACTTT---- i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64060173 303 + 204313951 -TTTTGATGTACATattgatgtacaataaactacacatatttaaagtgtataataagcatatgatagtttgataagttttgacatatgtattctc--------ttatgaaactcatcacttcagtcagagtagtgaatacacctgttacccacagacagttcctcatgtctccttgtcattcctctctatgcctgcacctctctccacaatagacaactgctgatctgctttgggtcactgtaggctactttg----tctagagtttcatataaatggaatcatatagcatgtactctt---------ttTAA--------AATTATTACTTA---- i calJac3.chr2 I 2 C 0 s saiBol1.JH378186 2188765 311 + 10068113 -TTttgatgtacatgttgacgtacaataaactatacatatttaaagtgtataacaagcatatgatagtttgataagttttgacatacgtattctcgtattcttgtatgaaactcatcacttcagtcagggtagtgaatatacctgctacccacagacagttcctcatgtctccttgtcattcctctccgtgcctgcacctctccccacgatagacaactgctgatctgctttctgtcactgtaggctactttg----tctagagtttcatataaatggaatcatatagcatgtactctt---------ttTAA--------AATTATTACTTA---- i saiBol1.JH378186 I 2 C 0 s cebCap1.NW_016107999v1 43904 302 - 709587 -ttttgatgtCCATattgacatacaataaactacacatatttaaagtgtataataagcatatgatagtttgataagttttgacatacgtattctc--------gtatgaaactcatcatttcagtcagggtagtgaatatacctgctacccacagacagttcctcatgtct-cttgtcattcctctccatgcctgcacctctctccacaatagacaactgctgatctgctttgtgtcactgtaggctactttg----tttagagtttcatataaatggaatcatatagcatgtactctt---------ttTAA--------AATTATTACTTA---- i cebCap1.NW_016107999v1 I 2 C 0 s aotNan1.NW_018501968v1 1144829 303 - 2246441 -TTCTGATGTACATattgacgtacaataaactacacatatttaaaatgtataataagcatatgatagtttgataagttttgacatacgtattctc--------atatgaaactcatcacttcagtcagggtagtgaatacacctgctacccacagacagttcctcatgcctctttgtcattcctctccgtgcctgcacctctctccacaatagacgactgctgatctgctttgtgtcactgtaggctactttg----tctagagtttcatataaatggaatcatatagcatgtactctt---------ttTAA--------AATTATTACTTA---- i aotNan1.NW_018501968v1 I 13 C 0 s canFam3.chr4 37162941 258 + 88276631 -ttttgaggtacatattgccatacaataagctacacatgtttgaagtgtatg--------------gtttgctaaattttggcatgtgcattttc--------tcatgaaacccgatcctacaatcaatgtagtgaacatacttatcacccacaaatacttcttcgtgtctgtttatctctattctc----------catctccctac--caagaaaccgctgatcaactttgtggcattgtagATTAGTTTG----C----Attttctttt---------------tcttttattttc---------tttaa--------gatttttattta---- i canFam3.chr4 C 0 I 3942 s dasNov3.JH562710 239792 306 - 960158 tatataatgtcta-attgacatctaataaaccacacgtatttaa-------------catataccggt----taagttttgacacatgtattctc--------ttgtgaaacccatcaccacaatcagaatagtgaatatatccatcacccacaaacatttcttcgtgtctttttgttatccttcctt---cctaacccacctcccac--caggcaaccactgatttgttttgtgtcactgtcagttactttgcattttcctagttttatgtaaatagagtcatacgtgatgtactcttgtctctttatttcacccagtgtaatTATTtttttttta i dasNov3.JH562710 C 0 C 0 e mm10.chr13 65979384 6914 - 120421639 I e otoGar3.GL873522 1215724 8145 + 48283576 I e proCoq1.NW_012152163v1 723064 31128 - 940639 I a score=404264.000000 s hg38.chr5_KI270795v1_alt 31946 41 + 131892 AAAaattgaggtaaa-ttatatatttaatttaccatctttac s panTro5.chr5 5280492 41 - 181907262 AAAaattgaggtaaa-ttatatatttaatttaccatctttac i panTro5.chr5 C 0 C 0 s panPan2.chr5 5542877 38 - 183735486 aag---tgaggtaaa-ttatatatttaatttaccatctttac i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1674708 41 + 3967317 AAAaattgaggtaaa-ttatatatttaatttaccatctttac i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4492653 41 + 163208435 AAAaattgaggtaaa-ttatatatttaatttaccatctttac i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5731392 42 - 180051392 AAAaattgaggtaaatatatatatttagtttaccatctttac i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5917198 41 - 181584905 AAAaattgaggtaaa-atatatatttagtttaccatctttac i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 946259 41 - 16193990 AAAaattgaggtaaa-atatatatttagtttaccatctttac i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1763276 41 - 21434487 AAAaattgaggtaaa-atatatatttagtttaccatctttac i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4732178 41 - 82825804 AAAAATTGAGGTAAA-ATATATATTTAGTTTGCCATCTTTAC i chlSab2.chr23 C 0 I 2369 s manLeu1.NW_012103943v1 227484 41 + 2521317 AAAaattgaggtaaa-atatatatttagtttaccatctttac i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1718535 41 - 2415367 AAAaattgaggtaaa-atatatatttagtttaccatctttac i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64060476 41 + 204313951 AAAaattgaggcaaa-atatgtatttagtttaccatctttac i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2189076 41 + 10068113 AAAaattggggtaaa-atatgtatttagtttaccatctgtac i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 44206 41 - 709587 AAAaattggggtaaa-atatgtatttagtttaccatctttac i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1145132 41 - 2246441 AAAaattgaggtaaa-atatgtatttagtttaccatcgttac i aotNan1.NW_018501968v1 C 0 C 0 s dasNov3.JH562710 240098 35 - 960158 -aagatttat------ttatttatttaactccccccctcccc i dasNov3.JH562710 C 0 C 0 e mm10.chr13 65979384 6914 - 120421639 I e otoGar3.GL873522 1215724 8145 + 48283576 I e canFam3.chr4 37163199 3942 + 88276631 I e proCoq1.NW_012152163v1 723064 31128 - 940639 I a score=47226.000000 s hg38.chr5_KI270795v1_alt 31987 5 + 131892 cattt s panTro5.chr5 5280533 5 - 181907262 cattt i panTro5.chr5 C 0 C 0 s panPan2.chr5 5542915 5 - 183735486 cattt i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1674749 5 + 3967317 cattt i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4492694 5 + 163208435 cactt i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5731434 5 - 180051392 cattt i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5917239 5 - 181584905 cattt i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 946300 5 - 16193990 cattt i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1763317 5 - 21434487 cattt i cerAty1.NW_012007035v1 C 0 C 0 s manLeu1.NW_012103943v1 227525 5 + 2521317 cattt i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1718576 5 - 2415367 cattt i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64060517 5 + 204313951 cattt i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2189117 5 + 10068113 cattt i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 44247 5 - 709587 catct i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1145173 5 - 2246441 cattt i aotNan1.NW_018501968v1 C 0 C 0 s dasNov3.JH562710 240133 5 - 960158 cggtt i dasNov3.JH562710 C 0 I 2861 e mm10.chr13 65979384 6914 - 120421639 I e otoGar3.GL873522 1215724 8145 + 48283576 I e canFam3.chr4 37163199 3942 + 88276631 I e proCoq1.NW_012152163v1 723064 31128 - 940639 I e chlSab2.chr23 4732219 2369 - 82825804 I a score=2629154.000000 s hg38.chr5_KI270795v1_alt 31992 330 + 131892 taaagtgtctagttcagtggtaataaatagatttataaggtcgggcacgatggctcatgcctgtaatcccagcactttg-ggaggccgaggggggcagatcacctgagatcaggagttcgagaccagcctggccaacacggtgaaaccctgtctctattaaaaatacaaaaattagccaggcggcatggtggagcatgcctgtagtcccagctactcaagaggctgaggcaggagaatcgcttgaacccaggaagtggaggttgcagtgaggcaacattgcactaccgcactccagcctgggtaacagaccgaggctccatctcaaa-aaa--a s panTro5.chr5 5280538 330 - 181907262 taaagtgtctagttcagtggtaataaatagatttataaggtcgggcacgatggctcatgcctgtaatcccagcactttg-ggaggccgaggggggcagatcacctgagatcaggagtttgagaccagcctggccaacacggtgaaaccctgtctctattaaaaatacaaaaattagccaggcggcatggtggagcatgcctgtagtcccagctactcaagaggctgaggcaggagaatcgcttgaacccaggaagtggaggttgcagtgagccaagattgcgctactgcactccagcctgggtaacagaccgaggctccatctcaaa-aaa--a i panTro5.chr5 C 0 C 0 s panPan2.chr5 5542920 330 - 183735486 taaagtgtctagttcagtggtaataaatagatttataaggtcgggcacgatggctcatgcctgtaatcccagcactttg-ggaggccgaggggggcagatcacctgagatcaggagttcgagaccagcctggccaacacggtgaaaccctgtctctattaaaaatacaaaaattagccaggcggcatggtggagcatgcctgtagtcccagctactcaagaggctgaggcaggagaatcgcttgaacccaggaagtggaggttgcagtgagccaagattgcgctaccgcactccagcctgggtaacagaccgaggctccatctcaaa-aaa--a i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1674754 330 + 3967317 taaagtgtctagttcagtggtaataaatagatttataaggtcgggcacgatggctcatgcctgtaatcccagcactttg-ggaggccgaggggggcagatcacctgagatcaggagtttgagaccagcctggccaacatggtgaaaccctgtctctattaaaaatacaaaaattagccaggcggcatggtggagcatgcctgtagtcccagctactcaagaggctgaggcaggagaatcgcttgaacccaggaagtggaggttgcagtgagccaagattgcattactgcactccagcctgggtaacagaccgaggctccatctcaaa-aaa--a i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4492699 330 + 163208435 taaagtgtctagttcagtggtaataaatagatttataaggtcgggcacgatgactcatgcctgtaatcccagcactttg-ggaagccgaggggggcagatcacctgagatcaggagtttgagaccagcctggccaacatggtgaaaccctgtctctattaaaaatacaaaaattagccaggcggcatggtggagtgtgcctgtagtcccagctactcaagaggctgaggcaggagaatcgcctgaacccaggaagtggaggttgcagtgagccaagattgcgctactgcactccagcctgggtaacagaccgaggctctgcctcaaa-aaa--a i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5731439 328 - 180051392 taaagtgtctagttcagtggtaataaatagatttataaggccgggcacaatggctcatgcctgtaatcccagcacttag-ggaggccaagatgggcaggtcacctgagatcaggagtttgagaccagcctggtcaacatggtgaaaccccgtctctactaaaaatacaaaaattagccaggcg---tggtagagtgtgcctgtaatcccagctactcaagaggctgaggcaggagaatcgcttgaacccgggaggcagaggttgcagtgagctgagatcgcgccactgtactccagcctgggtaacagaccaaggctccgtctcaaagaaa--t i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5917244 328 - 181584905 taaagtgtctagttcagtggtaataaatagatttataAggccgggcacaatggctcatgcctgtaatcccagcacttag-ggaggccaagatgggcaggtcacctgagatcaggagtttgagaccagcctggtcaacatggtgaaaccccgtctctactaaaaatacaaaaattagccaggcg---tggtagagtgtgcctgtaatcccagctactcaagaggctgaggcaggagaatcgcttgaacccgggaggcagaggttgcagtgagctgagatcgcgccactgtactccagcctgggtaacagaccaaggctccgtctcaaaaaaa--T i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 946305 328 - 16193990 taaagtgtctagttcagtggtaataaatagatttataaggccgggcacaatggctcatgcctgtaatcccagcacttag-ggaggccaagatgggcaggtcacctgagatcaggagtttgagactagcctggtcaacatggtgaaaccctgtctctactaaaaatacaaaaattagccaggcg---tggtagagtgtgcctgtaatcccagctactcaagaggctgaggcaggagaatcgcttgaacccgggaggcagaggttgcagtgagctgagatcgcgccactgtactccagcctgggtaacagaccaaggctccgtctcaaaaaaa--t i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1763322 327 - 21434487 taaagtgtctagttcagtggtaataaatagatttataaggccgggcacaacggctcatgcctgtaattccagcacttag-ggaggccaagatgggcaggtcacctgagatcaggagtttgagaccagcctggtcaacatggtgaaaccccgtctctactaaaaatgcaaaaattacccaggtg---tggtagagtgtgcctgtaatcccacctactcaagaggctgaggcaggagaatcgcttgaacccgggaggcggaggttgcagtgagctgagatcgcgccactgtactccagcctgggtaacagaccaaggctccgtctcaaa-aaa--t i cerAty1.NW_012007035v1 C 0 C 0 s manLeu1.NW_012103943v1 227530 328 + 2521317 taaagtgtctagttcagtggtaataaatagatttataaggccgggcacaatggctcatgcctgtaattccagcacttag-ggaggccaagatgggcaggtcacctgagatcaggagtttgagaccagcctggtcaacatggtgaaaccccgtctctactaaaaatacaaaaattagccaggcg---tggtagagtgtgcctgtaatcccagctactcaagaggctgaggcaggagaatcgcttgaacccgggaggcggaggttgcagtgagctgagatcgcgccactgtactccagcctgggtaacagaccaaggctccgtctcaaaaatt--t i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1718581 324 - 2415367 taaagtgtctagttcagtggtaataaatagatttataaggccgggcacgatggctcatgcctgtaatcccagcacttag-ggaggccaagatgggcagatcacctgagatcaggagttcaagaccagc---gtcaacatggtgaaaccccgtctctactaaaaatacaaaaattagccaggca---tggtggagtgtgcctgtagtcccagctactcaagaggctgaggcaggagaatcgcttgaacctgggaggtagaggttgcagtgagccgagatcgcgccgctgtactccagcctgggtaacagaccgaggctccgtctcaaa-aaa--t i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64060522 322 + 204313951 ttaagcatctag-tcagtggtaataagtacattta-aaggcctggtgctgtggctcgcacctgtaattccagcactttgcgggggctgaggcaggcggatcacctgagatcaggagtttgagaccagcctggccaacatggtgaaa-cttgtctctactaaaaatacaaaaatgagtcaggtg---tggtggcacgtgcctgtagtcccagctactcaggaggctgaggcaggagaatcgcctgaacccgggaagcagaggttgcagtgagccgagatcgtgctactgcacttcagcctgggtaacagactgagact--gtttcaaa-aaa--- i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2189122 322 + 10068113 ttaagcatctag-tcagtggtaataaatacattAATAAggcctggtgcagtggcttgcacctgtaattccagcactttg-ggaggctcaggcaggctgatcacctgagatcaggagtttgagactggcttggccagcatggtgaaa-cttgtctctactaaaaatacaaaaatgagccaggtg---tggtggcatgtgcctgtagtcccagctactcaggaggctgaggcaggagaatcacttgaacccaggaagcagaggttacagtgagccgagattgtgccactgcacttcagcctggataacagactgagact--gttacaaa-aaa--- i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 44252 323 - 709587 ttaagcatctag-tcagtggtaataaatacatttataaggcctggtgcagtggctcgcacctgtaattccagcactttg-ggaggctgaggcaggtggatcacctgagataaggagtttgagactggcctggccaatatggtaaaa-cttgtctctactaaaaatacaaaaatgagccaggtg---tggcggcatgtgcctgtagtcccaactactcaggaggctgaggcaggagaattgcttaaacccagcaagcagaggttgcagtgagctgagatcgtgccactgcacttcagcctagataacagactgagact--gtttcaaa-aaaa-- i cebCap1.NW_016107999v1 C 0 I 4 s aotNan1.NW_018501968v1 1145178 323 - 2246441 ttaagcatctag-tcagtggtaataaatacatttataAggcctggtgcagtggctcgcacctgtaattccagcactttg-cggggctgaggcaggcggatcacctgagatcaggagtttgagaccggcctggccaacatggtgaaa-cttgtctctactaaaaatacaaaaatgagccaggtg---tggtggcatgtgcctgtagttccagctactcaggaggctgaggcaggagaatcgcctgaacccgggaagcagaggttgcagtgagctgagattgtgccactgcacttcagcctggataacagactgagact--gtttcaaa-aaa-a- i aotNan1.NW_018501968v1 C 0 I 14 e mm10.chr13 65979384 6914 - 120421639 I e otoGar3.GL873522 1215724 8145 + 48283576 I e canFam3.chr4 37163199 3942 + 88276631 I e proCoq1.NW_012152163v1 723064 31128 - 940639 I e dasNov3.JH562710 240138 2861 - 960158 I e chlSab2.chr23 4732219 2369 - 82825804 I a score=42752.000000 s hg38.chr5_KI270795v1_alt 32322 14 + 131892 attttttttaatta s panTro5.chr5 5280868 14 - 181907262 atttttttaaatta i panTro5.chr5 C 0 C 0 s panPan2.chr5 5543250 14 - 183735486 ttttttttaaatta i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1675084 14 + 3967317 tttttaaaaaatta i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4493029 13 + 163208435 -ttaaaaaaaatta i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5731767 14 - 180051392 ttttttaaaaatta i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5917572 14 - 181584905 TTTTTTTAAAATTA i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 946633 14 - 16193990 ttttttaaaaatta i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1763649 14 - 21434487 ttttttaaaaatta i cerAty1.NW_012007035v1 C 0 C 0 s manLeu1.NW_012103943v1 227858 14 + 2521317 ttttttaaaaatta i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1718905 14 - 2415367 ttttttttaaatta i colAng1.NW_012115755v1 C 0 C 0 e cebCap1.NW_016107999v1 44575 4 - 709587 I e saiBol1.JH378186 2189444 0 + 10068113 C e mm10.chr13 65979384 6914 - 120421639 I e calJac3.chr2 64060844 0 + 204313951 C e otoGar3.GL873522 1215724 8145 + 48283576 I e canFam3.chr4 37163199 3942 + 88276631 I e proCoq1.NW_012152163v1 723064 31128 - 940639 I e dasNov3.JH562710 240138 2861 - 960158 I e aotNan1.NW_018501968v1 1145501 14 - 2246441 I e chlSab2.chr23 4732219 2369 - 82825804 I a score=24583.000000 s hg38.chr5_KI270795v1_alt 32336 7 + 131892 -taaaaat s panTro5.chr5 5280882 7 - 181907262 -taaaaat i panTro5.chr5 C 0 C 0 s panPan2.chr5 5543264 7 - 183735486 -taaaaat i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1675098 7 + 3967317 -taaaaat i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4493042 7 + 163208435 -taaaaat i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5731781 7 - 180051392 -taaacat i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5917586 7 - 181584905 -TAAACAT i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 946647 7 - 16193990 -taaacat i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1763663 7 - 21434487 -taaacat i cerAty1.NW_012007035v1 C 0 C 0 s manLeu1.NW_012103943v1 227872 7 + 2521317 -taaacat i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1718919 7 - 2415367 -taaaaat i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64060844 6 + 204313951 -taaaaa- i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2189444 6 + 10068113 -CAaaca- i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 44579 7 - 709587 aaaaaag- i cebCap1.NW_016107999v1 I 4 C 0 e mm10.chr13 65979384 6914 - 120421639 I e otoGar3.GL873522 1215724 8145 + 48283576 I e canFam3.chr4 37163199 3942 + 88276631 I e proCoq1.NW_012152163v1 723064 31128 - 940639 I e dasNov3.JH562710 240138 2861 - 960158 I e aotNan1.NW_018501968v1 1145501 14 - 2246441 I e chlSab2.chr23 4732219 2369 - 82825804 I a score=114290.000000 s hg38.chr5_KI270795v1_alt 32343 18 + 131892 aaaataa-------atacatttata s panTro5.chr5 5280889 18 - 181907262 aaaataa-------atacatttata i panTro5.chr5 C 0 C 0 s panPan2.chr5 5543271 18 - 183735486 aaaataa-------atacatttata i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1675105 18 + 3967317 aaaataa-------atacatttata i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4493049 18 + 163208435 aaaataa-------atacatttata i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5731788 18 - 180051392 aagataa-------agacagttata i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5917593 18 - 181584905 AAGATAA-------AGACAGTTATA i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 946654 18 - 16193990 aagataa-------agacagttata i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1763670 18 - 21434487 aagataa-------agacagttata i cerAty1.NW_012007035v1 C 0 C 0 s manLeu1.NW_012103943v1 227879 18 + 2521317 aagataa-------agacagttata i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1718926 18 - 2415367 aaaataa-------agacagttaca i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64060850 18 + 204313951 gaaataa-------aaacgtttata i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2189450 25 + 10068113 acaacaacaacaacaaATATATATA i saiBol1.JH378186 C 0 I 107 s cebCap1.NW_016107999v1 44586 18 - 709587 gaaataa-------atacatttata i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1145515 18 - 2246441 gaaataa-------aTATGTTTATA i aotNan1.NW_018501968v1 I 14 C 0 e mm10.chr13 65979384 6914 - 120421639 I e otoGar3.GL873522 1215724 8145 + 48283576 I e canFam3.chr4 37163199 3942 + 88276631 I e proCoq1.NW_012152163v1 723064 31128 - 940639 I e dasNov3.JH562710 240138 2861 - 960158 I e chlSab2.chr23 4732219 2369 - 82825804 I a score=34864.000000 s hg38.chr5_KI270795v1_alt 32361 6 + 131892 tgtata s panTro5.chr5 5280907 6 - 181907262 tgtata i panTro5.chr5 C 0 C 0 s panPan2.chr5 5543289 6 - 183735486 tgtata i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1675123 6 + 3967317 tgtata i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4493067 6 + 163208435 tgtgta i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5731806 6 - 180051392 ggtata i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5917611 6 - 181584905 GGTATA i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 946672 6 - 16193990 ggtata i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1763688 6 - 21434487 ggtata i cerAty1.NW_012007035v1 C 0 C 0 s manLeu1.NW_012103943v1 227897 6 + 2521317 ggtata i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1718944 6 - 2415367 ggtata i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64060868 6 + 204313951 tatata i calJac3.chr2 C 0 I 1 s cebCap1.NW_016107999v1 44604 6 - 709587 tatata i cebCap1.NW_016107999v1 C 0 I 1 s aotNan1.NW_018501968v1 1145533 6 - 2246441 TATATA i aotNan1.NW_018501968v1 C 0 I 1 e saiBol1.JH378186 2189475 107 + 10068113 I e mm10.chr13 65979384 6914 - 120421639 I e otoGar3.GL873522 1215724 8145 + 48283576 I e canFam3.chr4 37163199 3942 + 88276631 I e proCoq1.NW_012152163v1 723064 31128 - 940639 I e dasNov3.JH562710 240138 2861 - 960158 I e chlSab2.chr23 4732219 2369 - 82825804 I a score=7439148.000000 s hg38.chr5_KI270795v1_alt 32367 868 + 131892 ttttctcccatcatcacctctcttccttccccttcccagcctctggtaacaaccagtctactctctatct--------tcatgagatccac--ctttttagctcctgcatatgagtgagaacatgcaatatttatctgtttatgcttggcttatttcacttaacataatgacctctaatttc----atttatgttgctgcaaatgataggatttcattcttttttatggctgaataatactccatagtgtatttttggtggaatctttaaatttttttctaggtataagatcatgtcctttgcaaacaagggtaatttgacatcttcctttcagatttggatgccttttacttctttttcttgcctaatttctctgactcagcatgtactcttctgtcttgctccatttagtcagcataattattttgagattcatccattttgtttcttgcaaaaatagttca----tttttatttccgcagagtattccattgaatggatatatcacaatttgtttatcca-tttagctgttggtggccatttgtttccaatatggggcagttacaaac--agcttctatgaacatttgtgtacaagtctttgtacggatatatatttcctcttctcctgggcagacacctaggagtgtgatggctgcatcatatggtaagtgtatgtttaactttaccaccacgagagtgccatttcccccacaccttcgccaacacttgttatagccagtctttttattgaagccatcctaatgggcatgtaatggtatctcactgtggttttaatttgcatttttct-aatgacttacattgtagagcatttcttcatgtgcttatttgccatctgtatg---tctttggtgaaatgcctattaaaat s panTro5.chr5 5280913 871 - 181907262 ttttctcccatcatcacctctcttccttccccttcccggcctctggtaacaaccagtctactctctatct--------tcatgagatcccc--ctttttagctcctgcatatgagtgagaacatgcaatatttatctgtttatgcttggcttatttcacttaacataatgacctctaatttc----atttatgttgctgcaaatgataggatttcattcttttttatggctgaataatactccatagtgtatttttggtggaatctttaaatttttttctaggtataagatcatgtcctttgcaaacaagggtaatttgacatcttcctttcagatttggatgccttttacttctttttcttgcctaatttctctgacCcagcatgtactcttttgtcttgctccatttagtcagcataattattttgagattcatccatgttgtttcttgcaaaaacagttca----tttttatttccgcagagtattccattgaatggatatatcacaatttgtttatcca-tttagctgttggtggccatttgtttccaatatggggcggttacaaac--agcttctatgaacatttgtgtacaagtctttgtacggatatatatttcctcttctcctgggcagacacctaggagtgtgatggctgcatcatatggtaagtgtatgtttaaatttaccaccacgagagtgccatttcccccacacctttgccaacacttgttatagccagtctttttattgaagccatcctaatgggcatgtaatggtatctcactgtggttttaatttgcatttttct-aatgacttacattgtagagcatttcttcatgtgcttatttgccatctgtatgtcttctttggtgaaatgcctattaaaat i panTro5.chr5 C 0 C 0 s panPan2.chr5 5543295 871 - 183735486 ttttctcccatcatcacctctcttccttccccttcccggcctctggtaacaaccagtctactctctatct--------tcatgagatcccc--ctttttagctcctgcatatgagtgagaacatgcaatatttatctgtttatgcttggcttatttcacttaacataatgacctctaatttc----atttatgttgctgcaaatgataggatttcattcttttttatggctgaataatactccatagtgtatttttggtggaatctttaaatttttttctaggtataagatcatgtcctttgcaaacaagggtaatttgacatcttcctttcagatttggatgccttttacttatttttcttgcctaatttctctgacCcagcatgtactcttttgtcttgctccatttagtcagcataattattttgagattcatccatgttgtttcttgcaaaaatagttca----tttttatttccgcagagtattccattgaatggatatatcacaatttgtttatcca-tttagctgttggtggccatttgtttccaatatggggcggttacaaac--agcttctatgaacatttgtgtacaagtctttgtacggatatatatttcctcttctcctgggcagacatctaggagtgtgatggctgcatcatatggtaagtgtatgtttaaatttaccaccacgagagtgccatttcccccacacctttgccaacacttgttatagccagtctttttattgaagccatcctaatgggcatgtaatggtatctcactgtggttttaatttgcatttttct-aatgacttacattgtagagcatttcttcatgtgcttatttgccatctgtatgtcttctttggtgaaatgcctattaaaat i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1675129 869 + 3967317 ttttctcccatcatcacctctcttccttccccttcctggcctctggtaacaaccagtctactctctatct--------tcatgaggtccac--ctttttagctcctgcatatgagtgagaacatgcaatatttatctgtctatgcttggcttatttcacttaacataatgacctctaatttc----atttatgttgctgcaaatgataggatttcattcttttttatggctgaataatactccatagtgtatttttggtggaatctttaaa-ttttttctaggtataagatcatgtcctttgcaaacaagggtaatttgacatcttcctttcagatttggatgccttttacttctttttcttgcctaattgctctgacCcagcatgtactcttttgtcttgctccatttagtcagtgtaattattttgagattcatccatgttgtttcttgcaaaagtagttca----tttttatttctgcagagtattccattgaatggatatatcacaatttgtttatcca-tttagctgttggtggccatttgtttccaatatggggtggttacaaac--agcttctatgaacatttgtgtacaagtctttgtacggatatatatttcctcttctcctgggcagacacctaggagtgtgatggctgcatcatacggtaagtgtatgtttaactttaccaccatgagagtgccattt-ccccacacctttgccaacacttgttatagccagtctttttattgaagccatcctaatgggcatgtaatggtatctcactgtggttttaatttgcatttttct-aatgacttacattgtacagcatttcttcatgtgcttgtttgccatctgtatgtcttctttggtgaaatgcctattaaaat i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4493073 868 + 163208435 ttttctcccatcatcacctctcttccttccccttcccggcctctggtaacaaccagtctactctctatct--------tcatgagatccac--ctttttagctcctgcatataagtgagaacatgcaatatttatctgtctatgcttggcttatttcacttaacataatgacctctaatttc----atttatgctgctgcaaatgataggatttcattcttttttatggctgaataatactccatagtgtatttttggtggaatctttaaacttttttctaggtataagatcatgtcctttgcaaacaaggctaatttgacatcttcctttcagatttggatgccttttacttctttttcttgcctaattgctgtgacCcagcatgtactcttttgtcttgctccatttagtcagcataattattttgagattcatccatgttgtttcttgcaaaaatagttca----tttttatttctgcaaagtattccattgaatggatacatcacattttgtttatcca-tttagctgttggtggccatttgtttccaatttggggctgttgcaaac--agcttctatgaacatttgtgtacaagtctttgtacggatatatctttccttttctcctgggcagacacctaggagtgtgatggctgcatcatatggtaagtgtatgtttaacttttccac---gagagtgccatttcccccacacctttgccaacacttgttatagccaatctttttattgaagccatcctaatgggcatgtaacggtatctcactgtggttttaatttgcatttttct-aatgacttacattgtagagcatttcttcatgtgcttatttgccatctgtatgtcttctttggtgaaatgcctattaaaat i nomLeu3.chr2 C 0 I 6470 s rheMac8.chr6 5731812 872 - 180051392 ttttctcccatcatcacctctcttccttccccttcccggcctctggtaacaaccaatctactctctctct--------tcatgagatccac-tttttttagctcctgcgtgtgagtgagaacatgcaatatttatctgtctgtgcttggcttatttcacttaccataatgacctctaatttcatatatatatgttgctgcaaatgataggatttcattcttttttatggctgaatattactctgtagtgtatttttggtggaatctttaaa-ttttttctaggtttaagatcatgtcctttgcagacaaggctaatttgatatcttcctttcagatttggatgcctttta---cttcttcttgcctaattgctctgacCcagcatgtactcttttgtcttgcttcattcagtcagcataattattttgagattcatccatgttgtttcttgcaaaagtagttca----tttttatttctgcaaagtattccattgaatggatatatcataatttgtttatcca-tttagctgttggtggccatttgtttccaatttggggctgttacaaac--agcttctatgaacatttgtgtataagtcttggtatggatatatatttccttttctcctgggcaaacacctaagagtgtgatggctacaacatacggtaagtgtatgtttatctttaccaccatgagagtgccatttcccccacaccttcaccaacacttgttatagccagtctttttattgaagccatcctgatgggcatgtaatggtatctcactgtggttttaatttgcatttttct-aatgacttacattgtagagcatttcttcatgtgcttatttgccatctgtatgtcttctttggtgaaatgcctattaaaat i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5917617 875 - 181584905 TTTTctcccatcatcacctctcttccttccccttcccggcctctggtaacaaccaatctactctctctct--------tcatgagatccac-tttttttagctcctgcatgtgagtgagaacatgcaatatttatctgtctgtgcttggcttatttcacttaccataatgacctctaatttcatatatatatgttgctgcaaatgataggatttcattcttttttatggctgaatattactctgtagtgtatttttggtggaatctttaaa-ttttttctaggtttaagatcatgtcctttgcagacaaggctaatttgatatcttcctttcagatttggatgccttttacttcttcttcttgcctaattgctctgacCcagcatgtactcttttgtcttgcttcattcagtcagcataattattttgagattcatccatgttgtttcttgcaaaagtagttca----tttttatttctgcaaagtattccattgaatggatatatcataatttgtttatcca-tttagctgttggtggccatttgtttccaatttggggctgttacaaac--agcttctatgaacatttgtgtataagtcttggtatggatatatatttccttttctcctgggcaaacacctaggagtgtgatggctacaacatacggtaagtgtatgtttatctttaccaccatgagagtgccatttcccccacaccttcaccaacacttgttatagccagtctttttattgaagccatcctgatgggcatgtaatggtatctcactgtggttttaatttgcatttttct-aatgacttacattgtagagcatttcttcatgtgcttatttgccatctgtatgtcttctttggtgaaatgcctattaaaat i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 946678 876 - 16193990 ttttctcccatcatcacctctcttccttccccttcccggcctctggtaacaaccaatctactctctctct--------tcatgagatccacttttttttagctcctgcatgtgagtgagaacatgcaatatttatctgtctgtgcttggcttatttcacttaccataatgacctctaatttcatatatatatgttgctgcaaatgataggatttcattcttttttatggctgaatattgctctgtagtgtatttttggtggaatctttaaa-ttttttctaggtttaagatcatgtcctttgcagacaaggctaatttgatatcttcctttcagatttggatgccttttacttcttcttcttgcctaattgctctgacCcagcatgtactcttttgtcttgcttcattcagtcagcataattattttgagattcatccatgttgtttcttgcaaaagtagttca----tttttatttctgcaaagtattccattgaatggatatatcataatttgtttatcca-tttagctgttggtggccatttgtttccaatttggggctgttacaaac--agcttctatgaacatttgtgtataactcttggtatggatatatatttccttttctcctgggcaaacacctaggagtgtgatggctacaacatatggtaagtgtatgtttatctttaccaccatgagagtgccatttcccccacaccttcaccaacacttgttatagccagtctttttattgaagccatcctgatgggcatgtaatggtatctcactgtggttttaatttgcatttttct-aatgacttacattgtagagcatttcttcatgtgcttatttgccatctgtatgtcttctttggtgaaatgcctattaaaat i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1763694 874 - 21434487 ttttctcccatcatcacctctcttccttccccttcccggcctctggtaacaaccaatctactctctgtct--------tcatgagatccac-tttttttagctcctgcctgtgagtgagaacatgcaa-atttatctgtctgtgcttggcttatttcacttaccataatgacctctaatttcatatatatatgttgctgcaaatgataggatttcattcttttttatggctgaatattactctgtagtgtatttttggtggaatctttaaa-ttttttctaggtttaagatcatgtcctttgcagacaaggctaatttgatatcttcctttcagatttggacgccttttacttcttcttcttgcctaattgctctgacCcagcatgtactcttttgtcttgcttcattcagtcagcataattattttgagattcatccatgttgtttcttgcaaaagtagttca----tttttatttctgcaaagtattccattgaatggatatatcataatttgtttatcca-tttagctgttggtggccatttgtttccaatttggggctgttacaaac--agcttctatgaacatttgtgtataagtcttggtatggatatatatttccttttctcctgggcaaacacctaggagtgtgatggctacaacatacggtaagtgtatgtttatctttaccaccatgagggtgccatttcccccacaccttcaccaacacttgttatagccagtctttttattgaagccatcctgatgggcatgtaatggtatctcactgtggttttaatttgcatttttct-aatgacttacattgtagagcatttcttcatgtgcttatttgccatctgtatgtcttctttggtgaaatgcctattaaaat i cerAty1.NW_012007035v1 C 0 C 0 s manLeu1.NW_012103943v1 227903 883 + 2521317 ttttctcccatcatcacctctcttccttccccttcccggcctctggtaacaaccaatctactctctttcttcatgagatcatgagatctac-tttttttagctcctgcatgtgagtgagaacatgcaatatttatctgtctgtgcttggcttatttcacttaccataatgacctctaatttcatatatatatgttgctgcaaatgataggatttcattcttttttatggctgaatattactctgtagtgtatttttggtggaatctttaaa-ttttttctaggtttaagatcatgtcctttgcagacaaggctaatttgatatcttcgtttcagatttggatgccttttacttcttcttcttgcctaattgctctgacCcagcatgtactcttttgtcttgcttcattcagtcagcataattattttgagattcatccatgttgtttcttgcaaaagtagttca----tttttatttctacaaagtattccattgaatggatatatcataatttgtttatcca-tttagctgttggtggccatttgtttccaatctggggctgttacaaac--agcttctatgaacatttgtgtataagtcttggtatggatatatatttccttttctcctgggcaaacacctaggagtgtgatggctacaacatacggtaagtgtatgtttatctttaccaccatgagagtgccatttccgccacaccttcaccaacacttgttatagccagtctttttattgaagccatcctgatgggcatgtaatggtatctcactgtggttttaatttgcatttttct-aatgacttacattgtagagcatttcttcatgtgcttatttgccatctgtatgtcttctttggtgaaatgcctattaaaat i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1718950 873 - 2415367 ttttctcccgtcatcacctctgttccttccccttcccggcctctggtaacaaccaatctactctctctct--------tcatgagatccac--ctttttagctcctgcatgcgagtgagaacatgcaatatttatctgtctgtgcttggcttatgtcacttaacataatgacctctaatttcatatatatatgttgctgcaaatgataggatttcattcttttttatggctgaatattactctgtagtgtatttttggtggaatctttaaa-ttttttctaggtataagatcatgtcctttgcagacaaggctgatttgataccttcctttcagatttggatgccttttacttctttttcttgcctaattgctctaacCcagcatgtactcttttgccttgcttcattcagtcagcataattgttttgagattcatccgtgttgtttcttgcaaaagtagttca----tttttatttctgcaaagtattccattgaatggatatatcataatttgtttatcca-tttagctgttggtggccatttgtttccaatttggggctgttacaaag--agcttctatgaacatttgtgtataagtctttgtatggatatgtattttcttttctcccgggcaaacacctgggagtgtgatggctacaacatacggtaagtgtgtgtttatctttaccaccatgagagtgccatttgccccgcaccttcaccaacacttgttatagccaatctttttattgaagccatcctgatgggcatgtaatggtatctcactgtggttttaatttgcatttttct-aatgacttacattgtagagcatttcttcatgtgcttatttgccatctgtatgtcttctttggtg-aatgcctattaaaat i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64060875 866 + 204313951 ttttctcctctcatcacctctcttccttccctttcccgacctctggcaatgaccaatctactctctatct--------tcatgagatccac--ttttttagctcccacatataagt-agaacatgcaatatttatctgtctgtgcttggcttatttcacttaatataatgacctctaatttc----atttatgtttctgcaaatgataggatttcattctttgttctggctgaataatactccatggtgtgtttttggtggaatctttaaa-ttttttctaggtataagattatgtcctctgcaagcaaggctaatttgactt----ctttcagatttaaacgccttttacttctt-ttcttgcctaattgctctggcCcagcatgtactcttttgtcttgcttcattcaatcagcataat--ttttgaaattcatccatgttgt---ttgcaaaaatagttcattccttttcattgctgcaaagtattccatcgaatggatatgtcataatttgtttatccattttagcagttgatggcaattttcttccaattttgggctgttacaaacaaagcttctatgaacatttgtgtacaagtcttcatatggatatatatttccttttctcctggggaaacaccaatgagtgtgatggctacatcatacggtaagtgtatgtttaattttaccatcatgagagtgccatttcctccacaccttcaccaacacttgttatagccactctttttattgaagtcatccttatggatatataatggtttctcactgtggttttaatttgcatttttct-aatgacttacattgtagagcatttcttcatgtgcctatttgccatctgtatgtcttctttgatgaaatgccaattaaaat i calJac3.chr2 I 1 C 0 s saiBol1.JH378186 2189582 871 + 10068113 TTTCCTcctctcatcacctctcttccttccctttcttggcctctggcaatgaccaatctactctctatct--------tcatgagatccac--ttttttagctctcacatttaagtgagaacatgcaatatttatccgtctgtgcttggcttatttcacttaatataatgacctctaatttc----atttatgtttctgcaaatcataggatttcattcttttttatggctgagtaatactccatagtgtgtttttggtggaatctttaaa-ttttttctaggtataagattatgtcctctgcaaacaaggctaatttgacttcttcctttcagatttaaatgcc-tttacttctt-ttcttgcctaattgctctggcCcagcatgtactcttttgtcttgcttcattcaatcagcataattattttgaaattcatccatgttgt---ttgcaaaaatagttcattccttttcattgctgcaacgtattccatcgaatggatatatcataatttgtttatccattttagcagttgatgaccattttcttctaatttctggctgttacaaacaaagcttttaggaacatttgtgtacaagtctttgtatggatatatatttccttttctcct-gggaaacaccaatgagtgtgatggctacctcatatggtaagtgtatgtttaactttaccgttatgagagtgccatgtcctccacaccttcaccaacacttgttatagccaatctttttattgaagtcattcttatggacacttaatggtatctcactgtggttttaatttgcatttttct-aatgacttacattgtagagcatttcttcatgtgcttatttgccatctgtatgtcttctttggtgaaatgccaattaaaat i saiBol1.JH378186 I 107 C 0 s cebCap1.NW_016107999v1 44611 863 - 709587 tcttcttctctcatcacctttcttccttccctttcctggcctctggcaatgaccaatctactctctatct--------tcatgagatccac--ttttttagctcccacatataagtgagaacatacaatatttatctgtctgtgcttggcttatttcacttaatataatgacctc-----tc----atttatgtttctgcaaatgataggatttcattcttttttatggctgaataatactccatagtgtgtttttggtggaatctttaca-ttttttctaggtacaagattatgtcctctgcaaacaaggctaatttgacgtcttcctttcagatttaaatgccgtttacttctt-ttcttgcctaattgctctggcCcagcatgtactcttttgtcttgcgtcattcaatcagcataattactttgaaattcatccatgttat---ttgcaaaaatagtgcattccttttcattgctgcaaagtattccatcgaatggatatatcataatttgtttatcaattttagcagttggcca----tttcttccaattttggactgttacaaacaaagcttctatgaacatttgtgtacaagtctttgtatggatatatatttccttttctcctggggaaacaccaatgagtgtgatggctacctcatacggtaagtgtagatttaactttaccatcatgagagtgccatttcctccacaccttcaccaacacttgctatagcca-tctttttattgaagtcattcttatggagacgtaatggtatctcactgtggttttaatttgcatttttct-aatgacttacattgtagagcatctcttcatgtgcttatttgccatctgtatgtcttctttggtgaaatgccaattaaaat i cebCap1.NW_016107999v1 I 1 C 0 s aotNan1.NW_018501968v1 1145540 872 - 2246441 TTTTCTcctctcatcacctctcttccttccctttcccggcctctggcaatgaccaatctactctctatct--------tcatgagatccac--ttttttagctcccacatataagtgagaacatgcaatatttatctgtctgtgcttggcttatttgacttaatataatgacctgtaatttc----atttatgtttctgcaagtgataggatttcattcttttttatggctgaataatactccatagtgtgtttttggtggaatctttaaa-ttttttctagctataagattatgtcctctgcaaacaaggctaatttgacttcttcctttcagatttaaatgcc-tttacttctt-ttcttgcctgattgctctggcCcagcatgtactcttttgtgttgcttcattcaatcagcgtaattattttgaaattcatccatgttat---ttgcaaaaatagttcattccttttcattgctgcaaagtattccatcggatggatatatcataatttgtttttccattttagcagttgatggcaattttcttccaattttgggctgttacaaacaaagcttctatgaacatttgtgtacaagtctttgtatggatatatatttccttttctcctggggaaacaccaatgagtgtg-tggctacatcatacggtaagtgtatgtttaactttaccatcatgagagtgccatttcctccacaccttcaccaacacttgttatagccaatctttttattgaagtcattcttatggatacataatggtatctcactgtggttttaatttgcatttttctaaatgacttacattgtagagcatctcctaatgtgcttatttgccatctgtatgtcttctttggtgaaatgccaattaaaat i aotNan1.NW_018501968v1 I 1 C 0 e mm10.chr13 65979384 6914 - 120421639 I e otoGar3.GL873522 1215724 8145 + 48283576 I e canFam3.chr4 37163199 3942 + 88276631 I e proCoq1.NW_012152163v1 723064 31128 - 940639 I e dasNov3.JH562710 240138 2861 - 960158 I e chlSab2.chr23 4732219 2369 - 82825804 I a score=2754584.000000 s hg38.chr5_KI270795v1_alt 33235 343 + 131892 attttgaccgttttttaaaattagcttgcttgttttcttattgttgagttttgaaagttctttgtttattctgaatataaatgtttaatcagatatattcttcacgaatattttctccctgtctgtggcttgtcattttatttttt--aaagtgtctttcaaagtgcagaagtatgtaattttgatgaagtccaatttatttattgagatccagaatacataaggaactcatgtac-----------------aagaactttgttctttt----atggatcatgcttttggtgtcagatattaaaaaatctttgatatgatattcaaggccaaa-tatttttttctgtgt---tttcttctagaaatttt s panTro5.chr5 5281784 343 - 181907262 attttgaccgttttttaaaattagcttgtttgttttcttattgttgagttttgaaagttctttgtatattctgaatataaatgtttaatcagatatattcttcacgaatattttctccctgtctgtggcttgtcattttatttttt--aaagtgtctttcaaagtgcagaagtatgtaattttgatgaagtccaatttatttattgagatccagaacacataaggaactcatgtac-----------------aagaactttgttctttt----atggatcatgcttttggtgtcagatataaaaaaatctttgatatgatattcaaggccaaa-tatttttttctgtgt---tttcttctagaaatttt i panTro5.chr5 C 0 C 0 s panPan2.chr5 5544166 341 - 183735486 attttgaccgttttttaaaattagcttgtttgttttcttattgttgagttttgaaagttctttgtatattctgaatataaatgtttaatcagatatattcttcacgaatattttctccctgtctgtggcttgtcattttatttttt--aaagtgtctttcaaagtgcagaagtatgtaattttgatgaagtccaatttatttattgagatccagaacacataaggaactcatgtac-----------------aagaactttgttctttt----atggatcatgcttttggtgtcagatat-aaaaaatctttgatatgatattcaaggccaaa-ta-ttttttctgtgt---tttcttctagaaatttt i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1675998 343 + 3967317 attttgaccgttttttaaaattagcttgtttgttttcttattgttgagttttgaaagtcctttgtttattctgaatataaatgtttaatcagatatattcttcacgaatattttctccctgtccatggcttgtcattttatttttt--aaagtgtctttcaaagtgcagaagtatgtaattttgatgaagtccaatttatttattgagatccagaatacataaggaactcatgtac-----------------aagaactttgttctttt----atggatcatgcttttggtgtcagatataaaaaaatctttgatatgatattcaaggccaaa-tatttttttctgtgt---tttcttctagaaatttt i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4500411 345 + 163208435 attttgaccgttttttaaaattagcttgtttgttttcttattgttgagttttgagagttctttgtttattctgaatataaatgttaaatcagatatattcttcacaaatattttctccctgtctgtggcttgtcattttattttttaaaaagtgtctttcaaagtgcagaagtatttaattttgatgaagtccaatttatttattgagatccagaaaacacaaggaactcatgtac-----------------aagaactttgttctttt----atggatcatgtttttggtgtcagatataaaaaattttttgatatgatattcaaggccaaa-tatggttttctgtgt---tttcttctagaaatttt i nomLeu3.chr2 I 6470 C 0 s rheMac8.chr6 5732684 340 - 180051392 attttgactgtttttaaaaactagcttgtttgttttcttattgttgagttttgagagttctttgtttattctgaatataaatgcttaatcagatatattcttcacgaatattttctccctgtctgtggcttgtcattttattttctaaaaagtgtctttcaaggtgcagaagtatctaattttgatgaagtcca----atttattgagatccagaatgcacaaggaactcatgtac-----------------aggaactttgttctttt----atggatcatgcttttggtgtcagatataaaaaaatctttggtatgatattcaaggccaaa-t-tttttttctatgt---tttcttccagaagtttt i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5918492 340 - 181584905 attttgactgtttttaaaaactagcttgtttgttttcttattgttgagttttgagagttctttgtttattctgaatataaatgcttaatcagatatattcttcacgaatattttctccctgtctgtggcttgtcattttattttttaaaaagtgtctttcaaggtgcagaagtatctaattttgatgaagtcca----atttattgagatccagaatgcacaaggaactcatgtac-----------------aggaactttgttctttt----atggatcatgcttttggtgtcagatataaaaaaatctttggtatgatattcaaggccaaa-t-tttttttctatgt---tttcttccagaagtttt i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 947554 340 - 16193990 attttgactgtttttaaaaactagcttgtttgttttcttattgttgagttttgagagttctttgtttattctgaatataaatgcttaatcagatatattcttcacgaatattttctccctgtctgtggcttgtcattttattttttaaaaagtgtctttcaaggtgcagaagtatctaattttgatgaagtcca----atttattgagatccagaatgcacaaggaactcatgtac-----------------aggaactttgttctttt----atggatcatgcttttggtgtcagatataaaaaaatctttggtatgatattcaaggccaaa-t-tttttttctatgt---tttcttccagaagtttt i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1764568 341 - 21434487 attttggctgtttttaaaaactagcttgtttgttttcttattgttgagttttgagagttctttgtttattctgaatataaatgcttaatcagatatattcttcacgaatattttctccctgtctgtggcttgtcattttatttttttaaaaatgtctttcaaggtgcagaagtatctaattttgatgaagtcca----atttattgagatccaggatgcacaaggaactgatgtac-----------------cagaactttgttctttt----atggatcatgcttttggtgtcagatataaaaaaatctttgatatgatattcaaggtcaaatt-tttttttctatgt---tttcttccagaagtttt i cerAty1.NW_012007035v1 C 0 I 7864 s manLeu1.NW_012103943v1 228786 340 + 2521317 attttgactgtttttaaaaactagcttgtttgttttcttattgttgagttttgagagttctttgtttattctgaatataaatgcttaatcagatatattcttcacgaatattttctccctgtctgtagcttgtcattttattttttaaaaaatgtctttcaaggtgcagaagtatctaattttgatgaagtcca----atttattgagatccagaatgcacaaggaactgatgtac-----------------cagaactttgttctttt----atggatcatgcttttggtgtcagatataaaaaaatatttgatatgatattcaaggccaaa-t-tttttttctatgt---tttcttccagaagtttt i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1719823 341 - 2415367 attttcactgttttttaaaattagcttgtttgttttcttattgttgagttttgagagttctttgtttattctgaatataaatgcttaatcagatatattcttcatgaatattttctccctgtctgtggcttgtcattttattttttaaaaagtgtctttcaaggtgcagaagtatttaattttgatgaagtcca----atttattgagatccagaatgcacaaggaactcatgtac-----------------aagaactttgttctttt----atggatcatgcttttggtgtcagatataaaaaaatctttgatatgatattcaaggccaaa-tatttttttgtatgt---tttctgccagaagtttt i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64061741 346 + 204313951 attttgaccat-ttttcaaattagtttgt-----------ttgttgagttttgggagttctttgtttattctgaatataaatgcttaatgaaatatattcttcacaaatattttctccttgtctgtggcttgtcattttatttttt-aaaagtgtctttcaaagtgcaaaagcatttaattttgatgaagtcca----acttattgagatacagaatgtacaaggtactcatgtacaagaactttgaatgtataagaactttgttatttt----atggatcatgcttttggtgtcagatatg-aaaaatctttgatatgatattcaaggtcaaa-t-agtttttctatgtttctttcttctagaagtttt i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2190453 344 + 10068113 attttgaccatgttttaaaattagcttgt-----------ttgttgagttttgggagttcttcgtttattctgaatataaacgcttaatgaaatatattcttcacagatattttctccttgtctgtggcttgtcattttatttttt-aaaagtgtctttcaaagtgcagaagcatttaattttgatgaagtcca----acttattgagatacagaatgtacaaggaactcatgtacaaggactttgaatgtataagaacttcgttatttt----atggatcatgcttttggtgtcagatatg-aaaaatctttgatatgatattcaaggtcaaa-t-attttttctatgt---tttcttctagaagtttt i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 45474 339 - 709587 attttgaccatgttttaaaattagc---------------ttgttgggtttcaggagttctttgtttattctgaatataaatgcttaatgaaatatattcttcacaaatattttctccttgtctgtggcttgtcattttatttttt-aaaagtgtctttcaaagtgcagaagcatttaattttgatgaagtcca----acttatagagatacagaatgtacaaggaactcatgtacaagaacattgaatgtataagaactttattatttt----atggatcatgcttttggtgtcaggtatg--aaaatctttgatatgatattcaaggtcaaa-t-actttttctatgt---tttcttctagaagtttt i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1146412 348 - 2246441 attttgaccatgttttaaaattagcttgt-----------ttgttgagttttgggagttctttgtttattctgaatataaatgcttaatgaaatatattcttcacaaatattttctccttgtctgtggcttgtcattttatttttt-aaaagtgtctttcaaagtgcagaagcatttaattttgatgaagtcca----acttattgagatacagaatgtacaaggaactcatgtacaagaacttcaaatgtataagaactttgttatcttatggatggatcatgcttttggtgtcagatatg-aaaaatctttgatatgatattcaaggtcaaa-t-attttttctatgt---tttcttctagaagtttt i aotNan1.NW_018501968v1 C 0 C 0 e mm10.chr13 65979384 6914 - 120421639 I e otoGar3.GL873522 1215724 8145 + 48283576 I e canFam3.chr4 37163199 3942 + 88276631 I e proCoq1.NW_012152163v1 723064 31128 - 940639 I e dasNov3.JH562710 240138 2861 - 960158 I e chlSab2.chr23 4732219 2369 - 82825804 I a score=249221.000000 s hg38.chr5_KI270795v1_alt 33578 34 + 131892 atagttttaggctttacatttaggtctatgatcc s panTro5.chr5 5282127 34 - 181907262 atagttttaggctttacatttaggtctatgatcc i panTro5.chr5 C 0 C 0 s panPan2.chr5 5544507 34 - 183735486 atagttttaggctttacatttaggtctatgatcc i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1676341 34 + 3967317 atagttttaggctttacatttaggtctatgatcc i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4500756 34 + 163208435 atagttttgggctttacatttaggtctatgatcc i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5733024 34 - 180051392 atagttttaggctttacatttaggtctatgatcc i rheMac8.chr6 C 0 I 333 s macFas5.chr6 5918832 34 - 181584905 atagttttaggctttacatttaggtctatgatcc i macFas5.chr6 C 0 I 2 s macNem1.NW_012018466v1 947894 34 - 16193990 atagttttaggctttacatttaggtctatgatcc i macNem1.NW_012018466v1 C 0 I 325 s manLeu1.NW_012103943v1 229126 34 + 2521317 atagttttaggctttacatttaggtctatgatcc i manLeu1.NW_012103943v1 C 0 I 2 s colAng1.NW_012115755v1 1720164 34 - 2415367 atagttttaagctttacatttaggtctatgatcc i colAng1.NW_012115755v1 C 0 I 2 s calJac3.chr2 64062087 27 + 204313951 gtagttttaggctttatattta-------gatcc i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2190797 34 + 10068113 gtagttttaggctttatatttagatctatgatcc i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 45813 34 - 709587 gtagttttaggctttatatttagatctacagtcc i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1146760 34 - 2246441 gtagttttaggctttatatttagatctacaatcc i aotNan1.NW_018501968v1 C 0 C 0 e mm10.chr13 65979384 6914 - 120421639 I e otoGar3.GL873522 1215724 8145 + 48283576 I e cerAty1.NW_012007035v1 1764909 7864 - 21434487 I e canFam3.chr4 37163199 3942 + 88276631 I e proCoq1.NW_012152163v1 723064 31128 - 940639 I e dasNov3.JH562710 240138 2861 - 960158 I e chlSab2.chr23 4732219 2369 - 82825804 I a score=31945.000000 s hg38.chr5_KI270795v1_alt 33612 6 + 131892 attttt s panTro5.chr5 5282161 6 - 181907262 attttt i panTro5.chr5 C 0 C 0 s panPan2.chr5 5544541 6 - 183735486 attttt i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1676375 6 + 3967317 attttt i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4500790 6 + 163208435 attttt i nomLeu3.chr2 C 0 C 0 s macFas5.chr6 5918868 6 - 181584905 attgtt i macFas5.chr6 I 2 I 328 s manLeu1.NW_012103943v1 229162 6 + 2521317 attgtt i manLeu1.NW_012103943v1 I 2 I 316 s colAng1.NW_012115755v1 1720200 6 - 2415367 attttt i colAng1.NW_012115755v1 I 2 C 0 s calJac3.chr2 64062114 6 + 204313951 attttt i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2190831 6 + 10068113 attttt i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 45847 6 - 709587 attttt i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1146794 6 - 2246441 attttt i aotNan1.NW_018501968v1 C 0 C 0 e mm10.chr13 65979384 6914 - 120421639 I e otoGar3.GL873522 1215724 8145 + 48283576 I e cerAty1.NW_012007035v1 1764909 7864 - 21434487 I e macNem1.NW_012018466v1 947928 325 - 16193990 I e rheMac8.chr6 5733058 333 - 180051392 I e canFam3.chr4 37163199 3942 + 88276631 I e proCoq1.NW_012152163v1 723064 31128 - 940639 I e dasNov3.JH562710 240138 2861 - 960158 I e chlSab2.chr23 4732219 2369 - 82825804 I a score=46557.000000 s hg38.chr5_KI270795v1_alt 33618 13 + 131892 tagtt--aatttttt-- s panTro5.chr5 5282167 13 - 181907262 tagtt--aatttttt-- i panTro5.chr5 C 0 C 0 s panPan2.chr5 5544547 13 - 183735486 tagtt--aatttttt-- i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1676381 13 + 3967317 tagtt--aatttttt-- i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4500796 13 + 163208435 tagtt--aatttttt-- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5733391 13 - 180051392 tagtt--aatttttt-- i rheMac8.chr6 I 333 C 0 s macFas5.chr6 5919202 13 - 181584905 tagtt--aatttttt-- i macFas5.chr6 I 328 C 0 s macNem1.NW_012018466v1 948253 13 - 16193990 tagtt--aatttttt-- i macNem1.NW_012018466v1 I 325 C 0 s chlSab2.chr23 4734588 13 - 82825804 tagtt--aacttttt-- i chlSab2.chr23 I 2369 C 0 s manLeu1.NW_012103943v1 229484 13 + 2521317 tagtt--aatttttt-- i manLeu1.NW_012103943v1 I 316 C 0 s colAng1.NW_012115755v1 1720206 13 - 2415367 tagtt--aatttttt-- i colAng1.NW_012115755v1 C 0 I 3337 s calJac3.chr2 64062120 13 + 204313951 --gtg--ttttttttta i calJac3.chr2 C 0 I 4 s saiBol1.JH378186 2190837 15 + 10068113 --gtgtttttttttttt i saiBol1.JH378186 C 0 I 4 s cebCap1.NW_016107999v1 45853 3 - 709587 --tta------------ i cebCap1.NW_016107999v1 C 0 I 2 s aotNan1.NW_018501968v1 1146800 13 - 2246441 --gtt--tttttttttt i aotNan1.NW_018501968v1 C 0 I 2 e mm10.chr13 65979384 6914 - 120421639 I e otoGar3.GL873522 1215724 8145 + 48283576 I e cerAty1.NW_012007035v1 1764909 7864 - 21434487 I e canFam3.chr4 37163199 3942 + 88276631 I e proCoq1.NW_012152163v1 723064 31128 - 940639 I e dasNov3.JH562710 240138 2861 - 960158 I a score=7459424.000000 s hg38.chr5_KI270795v1_alt 33631 1039 + 131892 atagatgattacaagtatgtatccaagtttgtctttgtgcatatggatatccggttgtcctaacaccatttgttaagaaggctgcc--ttttgtctactgcatttcctttgcagttttgtcaaaaattcgaatatgtatgggtttatttgttgacgcttccttctgtttcactgatctgtgtggctattttgatgccgataccatgctgccttgattaatgtaactttatgattcttgaaatctggtagtcctaacccttcaactttgt-----tttttcagag----------------------------gggtgtgtgtgtacgtgtgtgtgtgtgtgtgt--gtgtgtgtgagagagttctagcttctttgcatctccctatgacctttataattagcttgtcaatttgta-agaacagcttcctgatactttaactggggttatgttgaatatatgcaacaatttggggagaattgatatgttaataatattgactcttcttTTAAAAattgatttatagtatttgtacatatttatggggttcatgtgatatttttgatagggccaggaggcagagaaattccaggcagaaaagggcagggtccctggcaagggccccaccctcaagcc--------tgacccaaagtgagaactttacatccccgttttcctgcttgaatgttgccttttccaaaaccacccctggcccaccctgca-cccccatcccctatccataaaaaccccaggcttcactggcagagggcagagaaagggagaagagaagaagcagctgaacatcagagagaagcagtttgacttcagaggaatggcttgatggtgggactttggagaaaaacaccttcctgctccatcccctttctagctctccttcccactgagagccacttccatgggcaataaaatcctccatatttaccacccttcaatttgttcgtgcaacctgattattcctggatgctgaataacagctcaggag-ctacgggtgtgaacactaaaggctgtcac------actgaccctctgccctcactggtggagagcaaccacttcacgtgaaaaggca s panTro5.chr5 5282180 1039 - 181907262 atagatgattacaagtatgtatccaagtttgtctttgtgcatatggatatccggttgtcctaacaccatttgttaagaaggctgcc--ttttgtctactgcgtttcctttgcagttttgtcaaaaattcgaatatgtatgggtttatttgttgacccttccttctgtttcactgatctgtgtggctattttgatgccgataccatgctgccttgattaatgtaactttatgattcttgaaatctggtagtcctaacccttcaactttgt-----tttttcagag----------------------------gggtgtgtgtgtacgtgtgtgtgtgtgtgtgt--gtgtgtgtgtgtgagttctagcttctttgcatctccctatgacctttataattagcttgtcaatttgta-agaaaagcttcctgatactttaactggggttatgttgaatatatgcaacaatttggggagaattgatatgttaataatattgactcttcTTTTAAAAattgatttatagtatttgtacatatttatggggttcatgtgatatttttgatagggccaggaggcagagaaattccaggcagaaaagggcagggtccctgacaagggccccaccctcaagcc--------tggcccaaagtgagaactttacatccccgttttcctgcttgaatgttgccttttccaaaaccacccctggcccaccctgca-cccccatcccctatccataaaaaccccaggcttcactggcagagggcagagaaagggagaagagaagaagcagctgaacatcagagagaagcagtttgacttcagaggaacggcttgatggtgggactttggagaaaaacaccttcctgctccatcccctttctagctctccttcccactgagagccacttccattggcaataaaatcctccatatttaccacccttcaatttgttcgtgcaacctgattattcctggatgctgaataacagctcaggag-ctacgggtgtgaacactaaaggctgtcac------actgaccctctgccctcactggtggagagcaaccacctcacgtgaaaaggca i panTro5.chr5 C 0 C 0 s panPan2.chr5 5544560 1034 - 183735486 atagatgattacaagtatgtatccaagtttgtctttgtgcatatggatatccggttgtcctaacaccatttgttaagaaggctgcc--ttttgtctactgcgtttcctttgcagttttgtcaaaaattcgaatatgtatgggtttatttgttgacccttccttctgtttcactgatctgtgtggctattttgatgccgataccatgctgccttgattaatgtaactttatgattcttgaaatctggtagtcctaacccttcaactttgt-----tttttcagag----------------------------gggtgtgtgtgtacgtgtgtgtgtgtgtgtgt--gtgtgtgt----gagttctagcttctttgcatctccctatgacctttataattagcttgtcaatttgta-agaaaagcttcctgatactttaactggggttatgttgaatatatgcaacaatttggggagaattgatatgttaataatattgactcttcttTTAAAAA-tgatttatagtatttgtacatatttatggggttcatgtgatatttttgatagggccaggaggcagagaaattccaggcagaaaagggcagggtccctgacaagggccccaccctcaagcc--------tggcccaaagtgagaactttacatccccgttttcctgcttgaatgttgccttttccaaaaccacccctggcccaccctgca-cccccatcccctatccataaaaaccccaggcttcactggcagagggcagagaaagggagaagagaagaagcagctgaacatcagagagaagcagtttgacttcagaggaacggcttgatggtgggactttggagaaaaacaccttcctgctccatcccctttctagctctccttcccactgagagccacttccattggcaataaaatcctccatatttaccacccttcaatttgttcgtgcaacctgattattcctggatgctgaataacagctcaggag-ctacgggtgtgaacactaaaggctgtcac------actgaccctctgccctcactggtggagagcaaccacctcacgtgaaaaggca i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1676394 982 + 3967317 atagatgattacaagtatgtatccaagtttgtctttgtgcatatg-------ggttgtcctaacaccatttgttaagaaggctgtc--ttttgtctactgcatttcctttgcagttttgtcaaaaattcgaatatgtatgggtttatttgttgacccttccttctgtttcactgatctgtgtggctattttgatgccgataccatgctgccttgattaatgtaactttatgattcttgaaatctggtagtcctaacccttcaacttcgt-----tttttcagag----------------------------gggcgtgtgtgtacgtgtgtgtgtgtgtgtgt--gtgtgtgt--gtgaattctagcttctttgcatctccctatgacctttataattagcttgtcaatttgta-agaaaagcttcctaatactttaactggggttatgttgaatatatgcaacaatttggggagaattgatatgttaataa-----ACTCTTCTTTTAAAAattgatttatagtatttgtacatatttatggggttcatgtgatatttttgatagggccaggaggcagagaaattccaggcagaaaagggcagggtccctggcaagggccccaccctcaagcc--------tggcccaaagtgagaactttacatccccgttt-------------------------------------------cctgca-cccccatcccctatccataaaaaccccaggcttcactggcagagggcagagaaagggagaagagaagaagcagctgaatatcagagagaagcagtttgacttcagaggaatggcttgatggtgggactttggagaaaaacaccttcctgctccatcccctttctagctctccttcccactgagagccacttccattggcaataaaatcctccatatttaccacccttcaatttgttcgtgcaacctgattattcctggatgctgaataacagctcaggag-ctacgggtgtgaacactaaaggctgtcac------actgaccctctgccctcactggtggagagcaaccacctcacgtgaaaaggca i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4500809 1035 + 163208435 atagatgatgacaagtatgtatccaagtttgtctttgtgcatatggatatccagttgtcctaacaccatttgttgagaaggctgtc--ttttgtctactgcatttcctttgcaattttgtcaaaaattcaaatatgtatgggtttattttttgaccctttcttctgtttcactgatctgtgtggctattttgatgctgataccatgctgccttgattaatgtaactttatgattcttgaaatctggtagtcctaacccttcaactttgttcttctttttcagag----------------------------gg--------------gtgtgtgtgtgtgtgt--gtgtgtgt----gagttctagcttctttacatctccctatgacctttataattagcttgtcaatttgtacagaaaagcttcctgatactttaactggggttatgttgaatatatgcaacaatttggggataattgatatgttaataatattgactgttcttttaaaagttgatttataatatttgtacatatttatggggttcatgtgatatttttgatagggccaggaggcagagaaattccaggcagaaaagggcagggtccctggcaagggccccaccctcaagccaggaatcatggcccaaagtgagaactttacatccccattttcctgcttgaatgttgccttttccaaaaccacccctggcccaccctgca-ccgccatcccctatccgtaaaaaccccaggcttcactggcagagggcagagaaagggagaagagaaggagcagctgaacatcagagagaagcagtttgacttcagaggaacggcttgatggtgggactttggagaaaaacaccttcctgctccatcccctttctagctctccttcccactgacagccacttccattggcaataaaatcctccatatttaccacccttcaatttgttcgtgcaacctgattattcctggatgctgaataagagctcaggtg-ctacgggtgtgaacactaaaggctgtcac------acttaccctctgccctcactggtggagagcaaccacctcacgtgaaaaggca i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5733404 1047 - 180051392 atagatgattgcaagtatgtatccaagtttgtctttgtgcatatggatatccagttgtcctaacaccatttgttgagaaggctatc--ttttgtctactgcatttcctttgcaattttgtcaaaaattcaagtatgtgtgggtttgttttttgaccctttcttctgtttcactgatctatgtggctattttgatgctgatgctatgctgccttgattaatgtaactttatgattcttgaaatctgg-agtcctaacccttcaactttgttcttctttttcagag----------------------------gggtgtgtgtgt--gtacgtgtgtgtgtgtgt--gtgtgtgt----gaattctagcttctttgcatctccctatgacctttataattagcttgccagtttgtacagaaaagcttcctgatactttaactggggttgtgttgaatatatgcaacaatttggggagaattggtatgttaataatattgactcttcttttaaaagttgatttatagtatttgtacatatttatggggttcatgtgatatttttgataggtacaggaggcggagaaattcccggcagaaaagggcaggctccctggcaagggccccaccctcaagcctggaatcgtggcccaaagtgagaactttacatccctgttttcctgcttgaatgttgccttttccaaaaccacccctggcctaccctgcaccccccgtcccgtatccataaaaaacccaggcttcactggcagagagcagagaaagggagaagagaagaagcagctgcacatcagagagaagcagtttgacttcagaaggacagcttgatagtgggactttggagaaaaacgccttcctgctccatcccctttccagctccccttcccacggacagccacttccattggcaataaaatcctccatattcaccacccttcaatttgtttgtgcaacctcatttttcctggatgctgaataagagctcaggtg-ctgtgggtgtgaacactaaaggctgtcac------actgaccctctgccctcactggtggagagcaaccacctgatatgaaaaggca i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5919215 1046 - 181584905 atagatgattgcaagtatgtatccaagtttgtctttgtgcatatggatatccagttgtcctaacaccatttgttgagaaggctatc--ttttgtctactgcatttcctttgcaattttgtcaaaaattcaaatatgtgtgggtttgttttttgaccctttcttctgtttcactgatctgtgtggctattttgatgctgatgctatgctgccttgattaatgtaactttatgattcttgaaatctgg-agtcctaacccttcaactttgttcttctttttcagag----------------------------gggtgtgtgtgt--gtacgtgtgtgtgtgtgt--gtgtgtgt----gaattctagcttctttgcatctccctatgacctttataattagcttgccaatttgtacagaaaagcttcctgatactttaactggggttgtgttgaatatatgcaacaatttggggagaattggtatgttaataatattgactcttcttttaaaagttgatttatagtatttgtacatatttatggggttcatgtgatatttttgataggtacaggagacggagaaattcccggcagaaaagggcaggctccctggcaagggccccaccctcaagcctggaatcgtggcccaaagtgagaactttacatccctgttttcctgcttgaatgttgccttttccaaaaccacccctggcctaccctgca-cccccgtcccgtatccataaaaaacccaggcttcactggcagagagcagagaaagggagaagagaagaagcagctgcacatcagagagaagcagtttgacttcagaaggacagcttgatagtgggactttggagaaaaacgccttcctgctccatcccctttccagctccccttcccacggacagccacttccattggcaataaaatcctccatattcaccgcccttcaatttgtttgtgcaacctcatttttcctggatgctgaataagagctcaggtg-ctgtgggtgtgaacactaaaggctgtcac------actgaccctctgccctcactggtggagagcaaccacctgatatgaaaaggca i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 948266 1046 - 16193990 atagatgattgcaagtatgtatccaagtttgtctttgtgcatatggatatccagttgtcctaacaccatttgttgagaaggctatc--ttttgtctactgcatttcctttgcaattttgtcaaaaattcaaatatgtgtgggtttgttttttgaccctttcttctgtttcactgatctatgtggctattttgatgctgatgctatgctgccttgattaatgtaactttatgattcttgaaatctgg-agtcctaacccttcaactttgttcttctttttcagag----------------------------gagtgtgtgtgt--gtacgtgtgtgtgtgtgt--gtgtgtgt----gaattctagcttctttgcatctccctatgacctttataattagcttgccaatttgtacagaaaagcttcctgatactttaactggggttgtgttgaatatatgcaacaatttggggagagttggtatgttaataatattgactcttcttttaaaagttgatttatagtatttgtacatatttatggggttcatgtgatatttttgataggtacaggaggcggagaaattcccggcagaaaagggcaggctccctggcaagggccccaccctcaagcctggaatcgtggcccaaagtgagaactttacatccctgttttcctgcttgaatgttgccttttccaaaaccacccctggcctaccctgca-cccccgtcccgtatccataaaaaacccaggcttcactggcagagagcagagaaagggagaagagaagaagcagctgcacatcagagagaagcagtttgacttcagaaggacagcttgatagtgggactttggagaaaaacgccttcctgctccatcccctttccagctccccttcccacggacagccacttccattggcaataaaatcctccatattcaccgcccttcaatttgtttgtgcaacctcatttttcctggatgctgaataagagctcaggtg-ctgtgggtgtgaacactaaaggctgtcac------actgaccctctgccctcactggtggagagcaaccacctgatatgaaaaggca i macNem1.NW_012018466v1 C 0 C 0 s chlSab2.chr23 4734601 1045 - 82825804 atagatgattgcaagtatgtatccaagtttgtctttgtgcgtatggatatccagttgtcctaacaccatttgttgagaaggctgtc--ttttgtctactgcatttccttcgcaattttgtcaaaaattcaaatatgtatgggtttgttttttgaccctttcttctgtttcactgatctatgtggctattttgatgctgataccatgctgccttgattaatgtaactttatgattcttgaaatctggtagtcctaaccctttaactttgttcttcttcttcagag----------------------------gggcgtgtgtgt--gta--tgtgtgtgtgtgt--gtgtgtgt----gaattctagcttctttgcatctccctatgacctttataattagcttgccaatttgtacagaaaagcttcctgatactttaactggggttgtgttgaatatatgcaacaatttggggagaattgatatgttaataatattgactcttcttttaaaagttgatttatagtatttgtacatatttatggggttcgtgtgatatttttgataggtacaggaggcagagaaattcccggcagaaaagggcaggctccctggcaagggcgccaccttcaagcctggaatcgtggcccaaagtgagaactttacatccctgttttcctgcttgaatgttgccttttccaaaaccacccctggcctaccctgca-cccccgtcccgtatccataaaaaccccaggcttcactggtagagagcagagaaagggagaagagaagaagcagctgcacatcagagagaagcagtttgacttcagaaggacagcttgatggtgggactttggagaaaaacgccttcctgctccatccactttccagctccccttcccatggacagccacttccattggcaataaaatcctccatattcaccgcccttcaatttgtttgtgcaacctgatttttcctggatgctgaataagggctcaggtg-ctgtgggtgtgaacactaagggctgtcac------actgaccctctgccctcactggtggagagcaaccacctgatatgaaaaggca i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 229497 1033 + 2521317 atagatgattgcaagtatgtatccaagtttgtctttgtgcatatggatatccagttgtcctaacaccatttgttgagaaggctgtc--ttttgtctactgcatttcctttgcaattttgtcaaaaattcaaatatgtgtgggtttgttttttgacccttttttctgtttcactgatctatgtggctattttgatgctgataccatgctaccttgattaatgtaactttatgattcttgaaatctgatagtcctaacccttcaactttgttcttctttttcagag----------------------------ggg----------------tgtgtgtgtgtgt--gtgtgtgt----gaattctagcttctttgcatctccctatgacctttataattagcttgccaatttgtacagaaaagcttcctgatactttaactggggttgtgttgaatatatgcaacaatttggggagaattgatatgttaataatattgactcttcttttaaaagttgatttatagtatttgtacatatttatggggttcatgtgatatttttgataggtacaggaggcagagaaattcccggcagaaaagggcaggctccctggcaagggccccaccctcaagcctggaattgtggcccaaagtgagaacttcacatccctgttttcctgcttgaatgttgccttttccaaaaccacctctggcctaccctgca-cccccgtcccatatccataaaaaacccaggcttcactggcagagagcagagaaagggagaagagaagaagcagctgcacatcagagagaagcagtttgacttcagaaggacagcttgatggtgggactttggagaaaaacgccttcctgctccatcccctttccagctccccttcccacagagagccacttccattggcaataaaatcctccatattcaccgcccttcaatttgttcgtgcaacctgatttttcctggatgctgaataagagctcaggtg-ctgtgggtgtgaacactaaaggctgtcac------actgaccctctgccctcactggtggagagcaaccacctgatatgaaaaggca i manLeu1.NW_012103943v1 C 0 C 0 s calJac3.chr2 64062137 1044 + 204313951 atacatgattacaagtatgtatccaagtttgtctttgtgcatatggatatccagttgtcttaacaccatttgttgagaagactgtc--ttttgtctaccgcattttatttgcaattttgtc-aaaattcaaatacgtatgggtttattttttgaccctttcttctatttcactaatctatgtgactattttgatgccaacaccacactgtcttgattaatgtagcttcataattcttgaaatctggtggtcctaactctttaactttgttcttccttttcagag----------------------gtgtgtatgtgtgtgtgtgcatgcatgtgtgt-tgtgt--atgtgtgt----gaattctagcttctttgcagctccctatgaactttataattagcttgccaatttgtacagaaaagcttcctgatactctagctggggttgtgttgaatatatgcagcaatctggggagaattcatatgttaataatattTCCTGATCTTTTAAAGatttatatataatatttgtacatacttatggggttcatgtgatatttttgataggaacaggagtcagagaaattccaggcagaaaagggcagggt-cctggcaagggctccacccttaatcctagaatcatggcctaaagtgagaactttacatccttgttttcctgcttgaatgttgccttttcaaaaaccacccctggcccactctgca-cccccatcctgtatccataaaaaccccaggcttcactggcagagagcagag-aaaggagaggagaagaagcagttgaacgtcagagagaagcagtttgacttcagaggcatggcttgatggtg-------ggagaaaaataccttcctgctccatcccctttccagctccccttctaactgagagccactttcattggcaataaaatccaccatattcaccatccttcaattcattcatgcagccgggttttt-ctggatgctgaataagagctcaggtggccacggttgtggacactaaaggctgtcac------actgactctctgccctcactgctggagagcaaccacctcaagtgaaaaggta i calJac3.chr2 I 4 I 4 s saiBol1.JH378186 2190856 1065 + 10068113 atacatgattacaagtatgtatccaagtttgtctttgtgcatatggatatccagctgtcttaacaccatttgttgagaagactgtc---tttgtctactgtattttattttcaattttgtc-aaaattaaaatatgtatgggtttattttttgaccctttcttctatttcactgatctatgtgac-attttgatggcaacaccacactgtcttgattaatgtagcttcataattcttgaaatctggtggtcctagccgtttaactttgttcttccttttcagagg--------------tgtgtgtgtgtgtgtgtgtgtgtgtgcacgcacatgtgt-tgtgtacatgtgtgt----gaattctagcgtctttgcatttccctatgaactttataattagcttgccaatttgtacagaaaagcttcctgatactctagctggggttgtgttgaatatatgcaacaatctggggagaattgatatgttaataatattTCCTGATCTTTTAAAAattgatatgtaatatttgtacatatttatggggttcatgtgatatttttgataggaacaggaggcagagaagttccaggcataaaagggcagggt-cctggctagggctccaccctcaagcctagaatcatggcctaaagtgagaactttacattctcgttttcctgcttgaatgttgccttttcaaaaaccacccctggcccactctgca-cccccatcctttatccataaaaaccccaggcttcactggcagagagcagagaaaaggagaagagaagaagcacttgaacgtcagagagaagcag-ttgacttcagaggcatggcttgatggtgggactttggagaaaaataccttcctgctccatcccctttccagctcctcttccaactgagagccactttcattggcaataaaatcctccatattcaccatctttcaattcattcatgcaacctgattttt-ctggatactgaacaagagctcaggtgaccacggatgtggacactaaagtccgtcctttagtgtctgactctctgccctcactggtagagagcaaccacctcaagtgaaaaggca i saiBol1.JH378186 I 4 I 4 s cebCap1.NW_016107999v1 45858 1081 - 709587 atacatgattacaagtatgtatccaagtttgtctttgtgcatatggatatccagttgtcttaacaccatttgttgagaagactgtcttttttgtctactgcattttatttgcaattttgtc-aaaattaaaacatgtatgggtttattttttgaccctttcttctacttcactgatctatgtgac-attttgatgtcgacaccacactgtcttgattaatgtagcttcataattcttgaaatctggtggtcctaactgtttaactttgttcttccttttcagaggtgtgtgtgtgtgtatgtgtgtgtgtgtgtgtgtatgtgtgcatgcacatgtgt-tgtgtacatgtgtgt----gaattctagcttctttgcatctccctatgaactttataattagcttgccaatttgtacagaaaagcttcctgataatccagctggggttgtgttgaatatatgcaacaatctggggagaattgatatgttaataatattTCttgtttttttaaa-attgatatataatatttgtacatatttctggggttcatgtagtatttttgataggaacaggaggcagagaaattccaggcagaaaagggcagggt-cctggcaagggctccacccttaagcctagaatcatggcctaaagtgagaactttacatccttgttttcctgcttgaatgttgccttttcaaaaaccacccctggcccactctgca--ccccatcctctagccataaaaaccccaggcttcactggcagagagcagagaaagggagaagcgaagaagcagttgaacgtcagagagaaccagtttgacttcagaggcatggcttgatggtgtgactttggagaaaaataccttcctgctccatcccgtttccagctccccttctatctgagagccattttcattggcaataaaatccgccatattcaccattcttcaattcattcatgcaaactgattgtt-ctggatgctgaacaagagctcaggtggccatggatgtgtacactaaaggtcgtcctttagtgtctgactctctgccctcaccggtagagagcaaccacctcaagtgaaaaagca i cebCap1.NW_016107999v1 I 2 I 4 s aotNan1.NW_018501968v1 1146815 1043 - 2246441 atacatgattacaagtatatatccaagtttgtctttgtgcatatggatatccagttgtcttaacaccatttgttgagaagactgtc--ttttgtctactgcattttatttgcaattttgtc-aaaattcaaatatgtatgtgtttattttttgacgctttcttctatttcactgatctatgtgactattttgatgccaacaccacactgtcttgattaatgtagcttcataattc-tgaaatctggtggtcctaaccctttaactttgttcttccttttcagag------------------------------gtgtgtgtgtgcgcacacgtgtgt-tgtgt--acgtgtgt----gaattctagcttctttgcatctccctatgaactttataattagcttgccaatttgtacagaaaagcttcctgatactctagctggggttgtgttgaatatatgcaacaatcttgggagaattcatatgttaataatattTCCTGATCTTTTAAAAattgatatataatatttgtacatacttatggggttcatgtgatatttttgataggaacaggaggcagagaaattccaggcagaaaagggcagggt-cctggcaagggctccaccctcaagcctaaaatcatggcctaaagtgagaactttacatcctcgttttcctgcttgaatgttgccttttcaaaaactacccctggcccactctgca-cccccatcctgtatccataaaaaccccaggcttcactggcagacagcagagaaaaggagaagagaagaagcagttgaacatcagagagaagcggtttgacttcagaggcatggcttgatggtgggactttggagaaaaataccttcctgttccatcccctttccagctccccttctaactgagagccactttcattggcaatagaatctgccatattcaccatccttcaattcattcatgcaacctgattttt-ccagatgctgaataagagctcaggtggccacggatgtggacactaaaggccgtcac------actgattctctgctctcactgctggagagcaaacacctcaagtgaaaaggca i aotNan1.NW_018501968v1 I 2 I 11 e mm10.chr13 65979384 6914 - 120421639 I e otoGar3.GL873522 1215724 8145 + 48283576 I e cerAty1.NW_012007035v1 1764909 7864 - 21434487 I e canFam3.chr4 37163199 3942 + 88276631 I e proCoq1.NW_012152163v1 723064 31128 - 940639 I e dasNov3.JH562710 240138 2861 - 960158 I e colAng1.NW_012115755v1 1720219 3337 - 2415367 I a score=18753.000000 s hg38.chr5_KI270795v1_alt 34670 7 + 131892 gagggcc- s panTro5.chr5 5283219 7 - 181907262 gagggcc- i panTro5.chr5 C 0 C 0 s panPan2.chr5 5545594 7 - 183735486 gagggcc- i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1677376 7 + 3967317 gagggcc- i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4501844 7 + 163208435 gagggcc- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5734451 7 - 180051392 gagggcc- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5920261 7 - 181584905 gagggcc- i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 949312 7 - 16193990 gagggcc- i macNem1.NW_012018466v1 C 0 C 0 s chlSab2.chr23 4735646 7 - 82825804 gagggcc- i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 230530 7 + 2521317 gagggcc- i manLeu1.NW_012103943v1 C 0 C 0 s calJac3.chr2 64063185 7 + 204313951 -aatgtta i calJac3.chr2 I 4 C 0 s saiBol1.JH378186 2191925 7 + 10068113 -aatgtta i saiBol1.JH378186 I 4 C 0 s cebCap1.NW_016107999v1 46943 7 - 709587 -aatgtta i cebCap1.NW_016107999v1 I 4 C 0 e mm10.chr13 65979384 6914 - 120421639 I e otoGar3.GL873522 1215724 8145 + 48283576 I e cerAty1.NW_012007035v1 1764909 7864 - 21434487 I e canFam3.chr4 37163199 3942 + 88276631 I e proCoq1.NW_012152163v1 723064 31128 - 940639 I e dasNov3.JH562710 240138 2861 - 960158 I e aotNan1.NW_018501968v1 1147858 11 - 2246441 I e colAng1.NW_012115755v1 1720219 3337 - 2415367 I a score=1691190.000000 s hg38.chr5_KI270795v1_alt 34677 238 + 131892 cactgagctgttcaacacttaagctgtctgtggatggcaaagctaaa-agagcacactgtaacacacgccctctggagcttcagggatcacaagtactccccacttgatgctgccttgggcctgcacggtgttttgctcctgctggcacccagaagcactcaccttggctcggctcctgtacctcatcacctgcgtgctgcccctcccatgaggggttgagagctgcaggc----taagtgag----- s panTro5.chr5 5283226 233 - 181907262 cactgagctgtttaacacttaagctgtctgtggatggcaaagctaaa-agagcacactgtaacacacgccctctggagcttcagggatcacgagtactccccacttgatgctgccttgggcctgcacggtgttttgctcctgctggcacccagaagcactcacctt-----ggctcctgtacctcatcacctgcgtcctgcccctcccatgaggggttgagagctgcaggc----taagtgag----- i panTro5.chr5 C 0 C 0 s panPan2.chr5 5545601 233 - 183735486 cactgagctgtttaacacttaagctgtctgtggatggcaaagctaaa-agagcacactgtaacacacgccctctggagcttcagggatcacgagtactccccacttgatgctgccttgggcctgcacggtgttttgctcctgctggcacccagaagcactcacctt-----ggctcctgtacctcatcacctgcgtgctgcccctcccatgaggggttgagagctgcaggc----taagtgag----- i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1677383 231 + 3967317 cactgagctgtttaacacttaagctgtctgtggat-gcaaagctaaa-agagcacactgtaacacacgccctctggagcttcagggatcacgagtactccccacttgatgctgccttgggcctgcacagtgttttgctcctgctggcacccagaagcactcacctt-----ggctcctgtacctcatcacctgcgtgctgcccctcccatga-gggttgagagctgcaggc----taagtgag----- i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4501851 237 + 163208435 cactgagctgtttaacacttaagctgtctgtggatggcaaagctaaa-agagcacgctgtaacacacgccctctggagcttcagggatcacgagtactccctacttgatgctgccttgggcctgcatggtgttttgctcctgctggcacccagaagcactcacctt-----ggctcctgtacctgatcacctgtgtgccgcccctcccatgaggggttgagagctgcaggctgagtaagtgag----- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5734458 234 - 180051392 cactgagctgtttaacacttaagctgtctgtggatggcaaagctaaatagagcacactgtgacacacgccctctggggcttcagggaccacaagtactccccactcgatgctgccttgggcctgcacggtgtttttctcctgccggcacccagaagcactcacctt-----ggctcctgcacctgatcacctgcatgctgcccctcccatgaggggtggagagctgcaggc----tgagtaag----- i rheMac8.chr6 C 0 I 5 s macFas5.chr6 5920268 233 - 181584905 cactgagctgtttaacacttaagctgtctgtggatggcaaagctaaa-agagcacactgtgacacacgccctctggggcttcagggaccacaagtactccccactcgatgctgccttgggcctgcacggtgtttttctcctgccggcacccagaagcactcacctt-----ggctcctgcacctgatcacctgcatgctgcccctcccatgaggggtggagagctgcaggc----tgagtaag----- i macFas5.chr6 C 0 I 5 s macNem1.NW_012018466v1 949319 233 - 16193990 cactgagctgtttaacacttaagctgtctgtggatggcaaagctaaa-agagcacactgtgacacatgccctctggggcttcagggaccacaagtactccccactcgatgctgccttgggcctgcaccgtgtttttctcctgccggcacccagaagcactcacctt-----ggctcctgcacctgatcacctgcatgctgcccctcccatgaggggtggagagctgcaggc----tgagcaag----- i macNem1.NW_012018466v1 C 0 I 5 s chlSab2.chr23 4735653 233 - 82825804 cactgagctgtttaacatttaagctgtctgtggatggcaaagctaaa-agagcacactgtaacacacgccctctggggcttcagggaccacaagtactccccacttgatgctgccttgggcctgcacggtgtttttctcctgccggcacccagaagcactcacctt-----ggctcctgtacctgatcacctgcatgctgcccctcccatgaggggtggagagctgcaggc----tgagtaag----- i chlSab2.chr23 C 0 I 5 s manLeu1.NW_012103943v1 230537 233 + 2521317 cactgagctgtttaacacttaagctgtctgtggatggcaaagctaaa-agagcacactgtaacacacgccctctggggcttcagggaccacaagtactccccactcgatgctgccttgggcctgcacgatgtttttctcctgccggcacccagaagcactcacctt-----ggctcctgcacctgatcacctgcatgctgcccctcccatgaggggtggagagctgcaggc----tgagtaag----- i manLeu1.NW_012103943v1 C 0 I 23 s calJac3.chr2 64063192 238 + 204313951 aactgaactgtttaacacttaagctgtccatggatggcaaagctaaa-agagcatactgtaacacacatactttggggctttggggatcatgagtactccctgcttggcactgccttgggcctgtatggaattttgctcctgctggcacccagaagcactcgcctt-----ggctcctgaacctgctcacctgtgtgcactccctcccatgaggtgttgagagctgctggt----ggagcaagtgagg i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2191932 238 + 10068113 aactgaactgtttaacacttaagctgtccatggatggcaaagctaaa-agagcacactgtaacacgtaccctttggggcttcggggatcacgagtacttcctgcttggcactgtcttgggcctgcatggagttttgctcctgctggtacccagaagcactcgcctt-----ggctcctgaacctgctcacctgtgtgcagcccctcccacgaggggttgagagctgcaggc----taagcaagcaagg i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 46950 238 - 709587 aagtgaactgtttaacacttaatctgtccatggatggcaaagctaaa-agagcacactgtaacatgtaccctttggggctttggggatcacgagtactccctgcttggcactgtcttgggcctgcatggagttttgctcctgttggtacccagaagcactcgcctt-----ggctcctgaacctgctcacctgtgtgcaccccttcccacgtggggttgagagctgcaggc----tgagcaagtgagg i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1147869 238 - 2246441 aactgaactgtttaacacttaagctatccatggatggcaaagctaaa-agagcacactgtaacacacaccctttggggcttcggggatcacgagtactccctgcttggcactgccttgggcctgtatggaattttgcccctgttggcacccagaagcacttgcctt-----ggctcctgaacctgctcacctgtgtgcaccccctcccacgaggggttgagagctgcaggc----tgagcaagtgagg i aotNan1.NW_018501968v1 I 11 C 0 e mm10.chr13 65979384 6914 - 120421639 I e otoGar3.GL873522 1215724 8145 + 48283576 I e cerAty1.NW_012007035v1 1764909 7864 - 21434487 I e canFam3.chr4 37163199 3942 + 88276631 I e proCoq1.NW_012152163v1 723064 31128 - 940639 I e dasNov3.JH562710 240138 2861 - 960158 I e colAng1.NW_012115755v1 1720219 3337 - 2415367 I a score=57307.000000 s hg38.chr5_KI270795v1_alt 34915 12 + 131892 cacccttgtcat s panTro5.chr5 5283459 12 - 181907262 cacccttgtcat i panTro5.chr5 C 0 C 0 s panPan2.chr5 5545834 12 - 183735486 cacccttgtcat i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1677614 12 + 3967317 cacccctgtcat i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4502088 12 + 163208435 cacccctgtcat i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5734697 11 - 180051392 cacccc-gtcat i rheMac8.chr6 I 5 C 0 s macFas5.chr6 5920506 11 - 181584905 cacccc-gtcat i macFas5.chr6 I 5 C 0 s macNem1.NW_012018466v1 949557 11 - 16193990 cacccc-gtcat i macNem1.NW_012018466v1 I 5 C 0 s chlSab2.chr23 4735891 11 - 82825804 cacccc-atcat i chlSab2.chr23 I 5 C 0 s calJac3.chr2 64063430 12 + 204313951 cacccttatcat i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2192170 12 + 10068113 cacccttatcct i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 47188 12 - 709587 cacccttatcat i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1148107 12 - 2246441 cacccttatcat i aotNan1.NW_018501968v1 C 0 C 0 e mm10.chr13 65979384 6914 - 120421639 I e otoGar3.GL873522 1215724 8145 + 48283576 I e cerAty1.NW_012007035v1 1764909 7864 - 21434487 I e canFam3.chr4 37163199 3942 + 88276631 I e proCoq1.NW_012152163v1 723064 31128 - 940639 I e dasNov3.JH562710 240138 2861 - 960158 I e colAng1.NW_012115755v1 1720219 3337 - 2415367 I e manLeu1.NW_012103943v1 230770 23 + 2521317 I a score=1727613.000000 s hg38.chr5_KI270795v1_alt 34927 229 + 131892 gaggcctgcagagggtttagggaaaatttcctgtttcattttgttatatgcatagactgtttaatgatcaaacgagggtgtttggggtatccatcccctcaagtatttatcatatctatatcttgggaacatttcaagtcctctcttcaagctattttgaaatataaaacacattggtaactgtagtcaccctactctgctataaaacattagaacttcttccttctat s panTro5.chr5 5283471 229 - 181907262 gaggcctgtagagggtttagggaaaatttcctgtttcattttgttatatgcatagactgtttaatgatcaaacgagggtgtttggggtatccatcccctcaagtatttatcatatctatatcttgagaacatttcaagtcctctcttcaagctattttgaaatataaaacacattggtaactgtagtcaccctactctgctataaaacattagaacttcttccttctat i panTro5.chr5 C 0 C 0 s panPan2.chr5 5545846 229 - 183735486 gaggcctgtagagggtttagggaaaatttcctgtttcattttgttatatgcatagactgtttaatgatcaaacgagggtgtttggggtatccatcccctcaagtatttatcatatctatatcttgagaacatttcaagtcctctcttcaagctattttgaaatataaaacacattggtaactgtagtcaccctactctgctataaaacattagaacttcttccttctat i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1677626 229 + 3967317 gaagcctgcagagggtttagggaaaatttcctgtttcattttgttatatgcatagactgtttaatgatcaaacgagggtgtttggggtatccatcccctcaagcatttatcatatctatatcttgggaacatttgaagtcctctcttcaagctattttgaaatataaaacacattggtaactgtagtcaccctactctgctatcacacattagaacttcttccttctat i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4502100 229 + 163208435 gaggcctgcagagggttcagggaaaatttcctgtttcgttttgttatatgcctagactgtttaatgatcaaacaagggtgtttgggatatccatcccctcaagtatttatcatatctatgtcttgggaacatttcaagtcctctcttcaagctattttgaaatataaaacacattggtaactgtagtcaccctgctctgctatcaaacattagaacttcttccttctat i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5734708 229 - 180051392 gagacctgcagaggggtcagggaaaatttcctgtttcattttgtgatatgcatagactgtttaatgatcaaatgagggtatttggggtatccatcccctcgagtatttatcatttctgtggcttgggaacatttcaagtcctctcttcaagctattttgaaatataaaacacattggtaactgtagtcaccctactctgctatcaaacattagaacttcttccttctat i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5920517 229 - 181584905 gagacctgcaaaggggtcagggaaaatttcctgtttcattttgtgatatgcatagactgtttaatgatcaaatgagggtatttggggtatccatcccctcgagtatttatcatttctgtggcttgggaacatttcaagtcctctcttcaagctattttgaaatataaaacacattggtaactgtagtcaccctactctgctatcaaacattagaacttcttccttctat i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 949568 229 - 16193990 gagacctgcaaaggggtcagggaaaatttcctgtttcattttgtgatatgcatagactgtttaatgatcaaatgagggtatttggggtatccatcccctcgagtatttatcatttctgtggcttgggaacatttcaagtcctctcttcaagctattttgaaatataaaacacattggtaactgtagtcaccctactctgctatcaaacattagaacttcttccttctat i macNem1.NW_012018466v1 C 0 C 0 s chlSab2.chr23 4735902 229 - 82825804 gagacctgcaaaggggtcagggaaaatttcctgtttcatttcgtgatatgcatagactgtttaatgatcaaacgagggtatttggggtatccatcccctcgagtatttatcatttctgtggcttgggaacattccaagtcctctcttcaagctattttgaaatataaaacacattggtaactgtagtcaccctcctctgctatccaacattagaatttcttccttctat i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 230793 229 + 2521317 gagacctgcaaaggggtcagggaaaatttcctgtttcattttgtgatatgcatagactgtttaatgatcaaatgagggtatttggggtatccatcccctcgagtatttatcatttctgtggcttgggaacatttcaagtcctctcttcaagctattttgaaatataaaacacattggtaactgtagtcaccctactctgctatcaaacattagaacttcttccttctat i manLeu1.NW_012103943v1 I 23 C 0 s calJac3.chr2 64063442 229 + 204313951 gaggtctgcaaagggatcagggaaaatttcctgtttcattttattatgtgcataaactgtttaatgatcaaatgagggtatttggggtatccatccccttgagtatttatcatttctatgttttggaaaaatttcaagtcctctcttcaagctattttgaaatataaaagacattgttaactgtagtcaccctactttgttatcaaacattagcgcttattccttctat i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2192182 225 + 10068113 gagacctgcaaacggatcagagaaaatttcctgttttattttgttatatgcatagactgtataatgatcaaatgagggtatgtggggtatccatccccttgagtatttatcatttctatg----gggaatatttcaagccctcttttcaagctattttgaaatataaaagacattgttaactgtagtcaccctactttgctatcaaacattagaacttattccttctat i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 47200 229 - 709587 gagacctgcaaagggatcagggaaaatttcctgtttcattttgttatatgcatagactgtttaatgatcaaatgagggtatgtgggatatccatccccttaagtatttatcatttctatgtttggggaatatttcaagtcctctcttcaagctattttgaaatataaaagacattgttaactgtagtcaccctactttgctatcagacattagaacttattccttctat i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1148119 227 - 2246441 gaggcctgcaaagggatcagggaaaatttcctgtttcattttgttatatgcataaactgtttaatgatcaaatgagggtatttggggtatccatccccttgagtatttatcatttc--tgttttgggaacatttcaagttctctcttcaagctattttgaaacataaaagacactgttaactgtagtcaccctactttgctatcaaacattagcacttattccttctat i aotNan1.NW_018501968v1 C 0 C 0 e mm10.chr13 65979384 6914 - 120421639 I e otoGar3.GL873522 1215724 8145 + 48283576 I e cerAty1.NW_012007035v1 1764909 7864 - 21434487 I e canFam3.chr4 37163199 3942 + 88276631 I e proCoq1.NW_012152163v1 723064 31128 - 940639 I e dasNov3.JH562710 240138 2861 - 960158 I e colAng1.NW_012115755v1 1720219 3337 - 2415367 I a score=4391089.000000 s hg38.chr5_KI270795v1_alt 35156 520 + 131892 aaaactatatgtttgtaacca-ttaaccaacctctctttat--ccccctgcaccacac-------ttacccatccaagtctctagtgtctatcattctgttctctacctccacgagattaacttttttagctcttacatttgaatgagaatatgggatatttgtctttctatgcctggcttattttacttaacat-aatgacctgcagttctatccatgttgctgcaaatgatatgatttca-tttttt---tgaccaaatagtattccactgtgcatatataccacattttctttattcatttgtccactgatggatacttaggttgattctatatctttgctattgtaaatagtgcttcactaagcgtggagttcaggtatccttttgatacactga-----tttcttttcctttggataaatacccagtagtgagattgctagactgtatggcatttctgtttttagttttttgagaaatccccatacacttttccatagtggctgctctattttgtgtacccaccaac--tgtat-aaa s panTro5.chr5 5283700 522 - 181907262 aaaactatatgtttgtaacca-ttaaccaacctctctttat--ccccctgcaccacac-------ttacccatccaagtctctagtatctatcattctgttctctacctccacaagattaacttttttagctcttacatttgaatgagaatatgggatatttgtctttctgtgcctggcttattttacttaacat-tatgacctgcagttctatccatgttgctgcaaatgatatgatttct-tttttt---tgaccaaatagtattccactgtgcatatataccacattttctttattcatctgtccactgatggatacttaggttgattctatatctttgctattgtaaatagtgcttcactaagcgtggagttcaggtatccttttgatacactga-----tttcttttcctttggataaatacccagtagtgagattgctagactgtatggcatttctgtttttagttttttgagaaatccccatacacttttccatagtggctgctctattttgtgtacccaccaacagtgtat-aaa i panTro5.chr5 C 0 C 0 s panPan2.chr5 5546075 522 - 183735486 aaaactatatgtttgtaacca-ttaaccaacctctctttat--ccccctgcaccacac-------ttacccatccaagtctctagtatctatcattctgttctctacctccacaagattaacttttttagctcttacatttgaatgagaatatgggatatttgtctttctgtgcctggcttattttacttaacat-tatgacctgcagttctatccatgttgctgcaaatgatatgatttct-tttttt---tgaccaaatagtattccactgtgcatatataccacattttctttattcatttgtccactgatggatacttaggttgattctatatctttgctattgtaaatagtgcttcactaagcgtggagttcaggtatccttttgatacactga-----tttcttttcctttggataaatacccagtagtgagattgctagactgtatggcatttctgtttttagttttttgagaaatccccatacacttttccatagtggctgctctattttgtgtacccaccaacagtgtat-aaa i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1677855 523 + 3967317 aaaactatatgtttgtaacca-ttaaccaacctctctttat-cccccctgcaccacac-------ttacccatccaagtctctagtatctatcattctgttctctacctccacgagattaacttttttagctcttacacttgaatgagaatatgtgatatttgtctttctgtgcctggcttattttacttaacataaatgacctgcagttctatccatgttgctgcaaatgatatgatttca-tttttt---tgaccaaatagtattccactgtgcatatataccacattttctttattcatttgtccactgatggatacttaggttgattctatatctttgctattgtaaatagtgcttcactaagcgtggagttcaggtatccttttgatacactga-----tttcttttcctttggataaata-ccagtagtgagattgctagactgtatggcatttctgtttttagttttttcagaaatccccatacacttttccatagtggctgctctattttgtgtacccaccaacagtgtat-aaa i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4502329 518 + 163208435 -aaactatatgtttgtacccatttaaccaacctctctttat-cccccctgcaccacac-------ttacctgtccaagtctctagtatctatcattctattctttacctccacaagactaacttttctagctcttacattcgaatgagaatatgtgatatttgtctttctgtgcctggcttatttcacttaacat-aatgaccttcagttctatccatgttgctgcaa-----atgatttca-tttttt---tgaccaaatagtattccactgtgtatatataccacattttctttattcatttgtccactgatggatacttaggctgattctatatctttgctattctaaatagtgcttcactaagcatggagttcaggtatccttttgatacactga-----tttcttttcctttggataaatacccagtagtgagattgctagactgtatggcatttctgtttttagttttttgagaaatccccgtacacttttccatagtggctgctctattttatgtacccaccaacaatgtat-aaa i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5734937 531 - 180051392 aaaactatatgtttgtaccca-ttaaccaacctctctttatctccccctgcactacac-------gtacccgtcctagtctctagtatctatcgttctattctctacctccatgagattaactattttagctcttacatttgaatgagaatatgtgatacttgtctttctgtgcctggcttatttcacttaacaa-aatgaccttcagttctatccatgttgctgcaaatgatatgatttca-tttttt--atgaccaaatagtattccattgtgtatatataccacattttctttattcgtttgtctactgatagatacttaggttaattctatatctttgctattgtaaataatgcttcactaagcatggagtgcaggtatccttttgatatactgatttcttttcttttcctttggataaatacccagtagtgggattgctagactgtatggcatttctgtttttagttttttgagaaatccccatacacttttccatagtggctggtctattttatgttcccaccaacagtgtataaaa i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5920746 531 - 181584905 aaaactatatgtttgtaccca-ttaaccaacctctctttatctccccctgcactacac-------atacccgtcctagtctctagtatctatcgttctattctctacctccatgagattaactattttagctcttacatttgaatgagaatatgtgatatttgtctttctgtgcctggcttatttcacttaacaa-aatgaccttcagttctatccatgttgctgcaaatgatatgatttca-tttttt--atgaccaaatagtattccattgtgtatatataccacattttctttattcgtttgtctactgatggatacttaggttaattctatatctttgctattgtaaataatgcttcactaagcatggagtgcaggtatccttttgatatactgatttcttttcttttcctttggataaatacccagtagtgggattgctagactgtatggcatttctgtttttagttttttgagaaatccccatacacttttccatagtggctggtctattttatgttcccaccaacagtgtataaaa i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 949797 531 - 16193990 aaaactatatgtttgtaccca-ttaaccaacctctctttatccccccctgcactacac-------atacccgtcctagtctctagtatctatcattctattctctacctccatgagattaactattttagctcttacatttgaatgagaatatgtgatatttgtctttctgtgcctggcttatttcacttaacaa-aatgaccttcagttctatccatgttgctgcaaatgatatgatttca-tttttt--atgaccaaatagtattccattgtgtatatatgccacattttctttattcgtttgtctactgatggatacttaggttaattctatatctttgctattgtaaataatgcttcactaagcatggagtgcaggtatccttttgatatactgatttcttttcttttcctttggataaatacccagtagtgggattgctagactgtatggcatttctgtttttagttttttgagaaatccccatacacttttccatagtggctggtctattttatgttcccaccaacagtgtataaaa i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1772773 531 - 21434487 AAaactatatgtttgtaccca-ttaaccaacctctctttattcccccctgcactacac-------atacccgtcctagtctctagtatctatcattctattctctacctccatgagattaactattttagctcttacatttgaatgagaatatgtgatattcgtctttctgtgcctggcttatttcacttaacaa-aatgaccttcagttctatccatgttgctgcaaatgatatgacttca-ttttct--atgaccaaatagtattccattgtgtatatataccacattttctttattcgtttgtctactgatggatacttaggttaattctatatctttgctcttgtaaataatgcttcactaagcatggagtgcaggtatccttttgatatactgatttcttttcttttcctttggataaatacccagtagtgggattgctagactgtatggcatttctgtttttagttttttgagaaatccccatacacttttccatagtggctggtctattttatgttcccaccaacagtgtataaaa i cerAty1.NW_012007035v1 I 7864 C 0 s chlSab2.chr23 4736131 499 - 82825804 aaaactata----------------------------ttgtccccccctgcactacac-------atacccgtcctagtctctagtatctatcattctattctctacctccatgagattaactattttagctcttacatttgaatgagaatatgtgatatttgtctttctgtgcctggcttatttcacttaacaa-aatgaccttcatttctatccatgttgctgcaaatgatatgatttca-tttttt--atgaccaaatagtattccattgtgtatatataccacattttctttattcgtttgtccactgatggatacttaggttaattctatatctttgctattataaatagtgcttcactaagcatggagtgcaggtatccttttgatatactga-----tttcttttcctttggataaatacccagtagtgggattgctagactgtatggcatttctgtgtttagttttttgagaaaaccccatacacttttccatagtggctgctctattttatgttcccaccaacagtgtataaaa i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 231022 531 + 2521317 aaaactatatgtttgtaccca-ttaaccaacctctctttattcccccctgcactacac-------atacccatcctagtctctagtatctatcattctattctctacctccatgagattaactattttagctcttacatttgaatgagaatatgtgatatttgtctttctgtgcctggcttatttcacttaacaa-aatgaccttcagttctatccatgttgctgcaaatgatatgacttca-tttttt--atgaccaaatagtattccattgtgtatatataccacattttctttattcgtttgtctactgatggatacttaggttaattctatatctttgctcttgtaaataatgcttcactaagcatggagtgcaggtatccttttgatatactgatttcttttcttttcctttggataaatacccagtagtgggattgctagactgtatggcatttctgtttttagttttttgagaaatccccatacacttttccatagtggctggtctattttatgttcccaccaacagtgtataaaa i manLeu1.NW_012103943v1 C 0 C 0 s calJac3.chr2 64063671 521 + 204313951 aaagctgaatgtttgtaccca-ttaaccgatctctgtg----------tgcaccacacagggggaatacccttcctagtctctactatctatcattctattctctgcttccatgagattaacttttttagctcttacatttgagtgagaacatgtgatattcttctttccatgcctggcttatttcccttaacat-aatgaccttcagttctgtccaagttgtggcaaatgataggatttca-tttttttaatgactaaatagtattccattgtgtatatataccacattttctttattcatttgtccactgatggatacttaggttgattctatatctttgctgttgtaaatagtgcttcaataagcatggagtggaggtatccttttgatatac--------tttcttttcctttggataagtacccagtagtgagattgctagactgtatggcatttctgttttcagttttctgagaaatccccatacacttttccatagtgtctggtctattttttgtacccaccagcagtgtat-aag i calJac3.chr2 C 0 I 618 s saiBol1.JH378186 2192407 526 + 10068113 aaagctgtatgtttgtaccca-ttaaccaacctctcttcat-cccccctgcaccacac-------atacccttcctagtctctactatctatcattctattctctgcttccacgagattaacttttttatctcttacatttgagtgagaacatgtgatattcgtctttccgtgcctggcttatttcccttaacat-aatgaccttcagttctatccatgttgcggcaaatgataggatttcattttttttaatgactaaatagtattccattgggtatatataccacattttctttattca-ttgtccactgatggatacttaggttgattctatatctttgctattgtaaatagtgcttcaataagcatggagtgcaggtatccttttgatatgctga-----tttgtttgcctttggataagtacccaggagtgagattgctagactgtatggcatttcaccttttagttttctgagaaatccccatacacttttccatagtgtctggtctattttatgtacccaccagcagtgtat-aag i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 47429 526 - 709587 aaagctgtatgtttgtaccca-ttaaccaatctctctttat-cccccctgcaccacat-------atacccttcctagtctctactatctatcattctattttctgcttccatgagattaacttttttagctcttaaatttgagtgagaacatgtgatattcatctctctgtgcctggcttatttcccttaacat-aatgaccttcagttctatccatgttgcagcaaatgataggatttca-tttttttaatgactaaatagtattccattgtgtatatataccacattttctttattcatttgtccactgatggatacttaggttgattctatatctttgctattgcaaatagtgcttcaataagcatggagtgcaggtatccttttgatatactga-----tttcttttcctttggataagtacccagtagtgagattgctaggctgtatggcatttccgtttttagttttctgagaaatccccatacacttttccatagtgtctggcctattttatgtactcaccagcagtgtat-aag i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1148346 525 - 2246441 aaagctgtatgtttgtaccca-ttaactgatctctctttat-cccccctgcaccacac-------atacccttcctagtctcttctatccatcattctattctctgcttccatgagattaacttttttagctcttacatttgagtgagaacatgtgatattcatctttctgtgcctggcttatttcccttaacat-aatgaccttcagttctatccatgttgcggcaaatgatgggatttca--ttttataatgactaaatagtattccattttgtatatataccacattttctttattcatttgtccactgatggatacttaggttgattctatatctttgctattgtaaatagtgcttcaataagcatggagtgcaggtatccttttgatatactga-----tttcttttcctttggataagtacccagtagtgagattgctagactgtatggcatttctgtttttagttttctgagaaatccccatacacttttccatagtatctggtgtattttatatacccaccagcagtgtat-aag i aotNan1.NW_018501968v1 C 0 C 0 e mm10.chr13 65979384 6914 - 120421639 I e otoGar3.GL873522 1215724 8145 + 48283576 I e canFam3.chr4 37163199 3942 + 88276631 I e proCoq1.NW_012152163v1 723064 31128 - 940639 I e dasNov3.JH562710 240138 2861 - 960158 I e colAng1.NW_012115755v1 1720219 3337 - 2415367 I a score=2901304.000000 s hg38.chr5_KI270795v1_alt 35676 342 + 131892 agttcccttttctctacatcctcactgtcatctgttactttttgtcatttagtaatagccattctaactgggctaggagaatatctcattgtgattttgatttgcatttccctaatgattagtgatgctgagtgttctttaatatacctgttgaccatttgt---------------aaatgtctattcatgtcctttgtccact---tgttaatgggac---ttttta----ttttttttact-----gttgtttgagttccttgtacattctggatattcatctcttgtcagatggacagtttgcatatattttaatcccattctgtgggttgtcttttcactttgtcggttgttttctgtgcagaagct s panTro5.chr5 5284222 346 - 181907262 agttcccttttctctacatcctcactgtcatctgttactttttgtcatttagtaatagccattctaactgggctaggagaatgtctcgttgtgattttgatttgcatttccctaatgattagtgatgctgagtgttctttaatatacctgttgaccatttgt---------------aaatgtctattcatgtcctttgtccact---tgttaatgggac---ttttta-----tttttttactgttgagttgtttgagttccttgtacattctggatattcatctcttgtcagatggacagtttgcatatattttaatcccattctgtgggttgtcttgtcactttgtcggttgttttctgtgcagaagct i panTro5.chr5 C 0 C 0 s panPan2.chr5 5546597 346 - 183735486 agttcccttttctctacatcctcactgtcatctgttactttttgtcatttagtaatagccattctaactgggctaggagaatatctcgttgtgattttgatttgcatttccctaatgattagtgatgctgagtgttctttaatatacctgttgaccatttgt---------------aaatgtctattcatgtcctttgtccact---tgttaatgggac---ttttta-----tttttttactgttgagttgtttgagttccttgtacattctggatattcatctcttgtcagatggacagtttgcatatattttaatcccattctgtgggttgtcttgtcactttgtcggttgttttctgtgcagaagct i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1678378 348 + 3967317 agttcccttttctctacatcctcactgtcatctgttactttttgtcatttagtaatagccattctaactgggctaggagaatatctcattgtgattttgatttgcatttccctaatgattagtgatgctgagtgttctttaatatacctgttgaccatttgt---------------aaatgtctattcatgtcctttgtccact---tgttaatgggac---ttttta---tttttttttactgttgagttgtttgagttccttgtacattctggatattcatctcttgtcagatggacagtttgcatatattttaatcccattctgtgggttgtctcttcactttgtcggttgttttctgtgcagaagct i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4502847 348 + 163208435 agttcccttttctctacatcctcaccgtcatctgttactttttgtcatttagtaatagccattctaactgggctaggagaatatctcattgtgattttgatttgcatttccctaatgattagtgatgttgagtgttttttaatatacctgttgaccatttgt---------------aaatgtctattcatgtcctttgtccgct---tgttaatgggac---ttttta---tttttttttactgttgagttgtttgagttccttgtacattctggatattcatctcttgtcagatggacagtttgcatatattttaatcccattctgtgggttgtctcttcactttgttggttgttttctgtgcagaagct i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5735468 349 - 180051392 agttcccttttctctacatcctcaccgtcatctgttactttttgtcatttagtaatagccattctgactgggctaggagaatatctcattgtggttttgatttgcatttccctaatgattagttatgttgggtgttttttaatatacctgttgaccatttgt---------------aaatgtctatttatgtcctttgtcctcttaatgttaatggaat---ttttta-----tttttttactgttgagttgtttgagttccttgtacattctggatattcgtctcttgtcagatggacagtttgcatatattttaatcccattctgtgggttgtctcttcactttgttggttgttttctgtgcagaagct i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5921277 349 - 181584905 agttcccttttctctacatcctcaccgtcatctgttactttttgtcatttagtattagccattctgactgggctaggagaatatctcattgtggttttgatttgcatttccctaatgattagttatgttgggtgttttttaatatacctgttgaccatttgt---------------aaatgtctatttatgtcctttgtcctcttaatgttaatggaat---ttttta-----tttttttactgttgagttgtttgagttccttgtacattctggatattcgtctcttgtcagatggacagtttgcatatattttaatcccattctgtgggttgtctcttcactttgttggttgttttctgtgcagaagct i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 950328 349 - 16193990 agttcccttttctctacatcctcaccgtcatctgttactttttgtcatttagtaatagccattctgactgggctaggagaatatctcattgtggttttgatttgcatttccctaatgattagttatgttgggtgttttttaatatacctgttgaccatttgt---------------aaatgtctatttatgtcctttgtcctcttaatgttaatggaat---ttttta-----tttttttactgttgagttgtttgagttccttgtacattctggatattcgtctcttgtcagatggacagtttgcatatattttaatcccattctgtgggttgtctcttcactttgttggttgttttctgtgcagaagct i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1773304 349 - 21434487 agttcccttttctctacatcctcaccgtcatctgttactttttgtcatttagtaatagccattctaactgggctaggagaatatctcattgtggttttgatttgcatttccctaatgattagttatgttgggtgttttttaatatacctgttgaccatttgt---------------aaatgtctatttatgtcctttgtcctcttaatgttaatggaat---ttttaa-----tttttttactgttgagttgtttgagttccttgtacattctggatattcgtctcttgtcagatggacagtttgcatatattttaatcccattctgtgggttgtctcttcactttgttggttgttttctgtgcagaagct i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4736630 346 - 82825804 agttcccttttctctacatcctcaccgtcatctgttactttttgtcatttagtaatagccattctaactgggctaggagaatatctcattgtggttttgatttgcatttccctaatgattagttatgttgagtgttttttaatatacctgttgaccatttgt---------------aaatgtctatttatgtcctttgtccact---tgttaatggaat---ttttta-----tttttttactgttgagttgtttgagttccttgtacattctggatattcgtctcttgtcagatggacagtttgcatatattttaatcccattctgtgggttgtctcttcactttgttggttgttttctgtgcagaagct i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 231553 343 + 2521317 agttcccttttctctacatcctcaccgtcatctgttactttttgtcatttagtaatagccattctaactgggctaggagaatatctcattgtggttttgatttgcatttccctaatgattagttatgttgggtgttttttaatatacctgttgaccatttgt---------------aaatgtctatttatgtcctttgtcctc------ttaatggaat---ttttta-----tttttttactgttgagttgtttgagttccttgtacattctggatattcgtctcttgtcagatggacagtttgcatatattttaatcccattctgtgggttgtctcttcactttgttggttgttttctgtgcagaagct i manLeu1.NW_012103943v1 C 0 C 0 s calJac3.chr2 64064810 333 + 204313951 agttcccttttctctacatcctcaccatcatctgttactttttgttatt---taatcatctttctaactggggtaagagaatatctcattgtggttttgatttgcgtttccctaatgattagtgatgttgagtgtttaaatatatatctgttgactatttctatgtcttcttttgagaaatgtctattcatttcctttgtccatt---tattaatgggat---ttattattatttttttttactg---------ttgagttccttgtacattctggatattagtctcttgtcagatggacagttggcatatatttt-atcccattctgtgggttgtt--------------------ttctgtgcacaaact i calJac3.chr2 I 618 C 0 s saiBol1.JH378186 2192933 362 + 10068113 agttcccttttctccacatcctcaccatcatctgttactttttgttatt---taatcgccattctaactggggtaagagaatatctcattgcggttttgatttgcatttccctaatgattagtgatgttgagtgttttaaaatatatctgttgaccatttgtatgccttcttctgagaaatgtctattcatgtcctttgtccatt---tgttaatgggat---ttattattattattttttactgttgaattgtttgagttccttgtacattctggatattagtctcttatcagatggacagtgggcatatatttt-atcccattctgtgggttgtctcttcactttgttggttgtattctgtgcacaaact i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 47955 365 - 709587 agttcccttttctctacattctcaccatcatctgttactttttgttatt---taatcgccattctaactggggtaagagaataattcattgtggttttgatttgcatttccctaatgattagtgatgttgagtgttttaaaatgtatctgttgaccatttgtatgtcttcttttgagaaatgtctattcatgtcctttgtccatt---tgttaatgggatttattattattatttttttttactgttaagttgtttgagttccttgtacattctggatattagtcacttgtcagatggatagttggcatatatttt-atcccattctgtgggttgtctcttcactttgttggttgttttctgtgcacaaact i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1148871 362 - 2246441 agttcccttttctctacatcctcaccatcatctgttactttttgttatt---taatcaccattctacctggggtaagagaatatctcattgtggttttgatttgcatttccctaatgattagtgatgttgagtgttttaaaatatatctgttgaccatttgtatgtcttcttttgagaaatgtctattcatgtcctttgtccatt---tgttaatgggat---ttattattattattttttactgttaagttgtttgagttccttgtacgttctggatattagtctcttgtcagatggacagttggcatatatttt-atcccattctgtgggttgtctcttcactttgttggttgttttctgtgcacaaact i aotNan1.NW_018501968v1 C 0 C 0 e mm10.chr13 65979384 6914 - 120421639 I e otoGar3.GL873522 1215724 8145 + 48283576 I e canFam3.chr4 37163199 3942 + 88276631 I e proCoq1.NW_012152163v1 723064 31128 - 940639 I e dasNov3.JH562710 240138 2861 - 960158 I e colAng1.NW_012115755v1 1720219 3337 - 2415367 I a score=3497054.000000 s hg38.chr5_KI270795v1_alt 36018 354 + 131892 ttttagtttaatatagtcccacttgtctatttttatttttgttgcctgtgcttttgaggtcttagccacaaaaatctctgtctagaccaatatcctgaagtgtttcccctgtatgttttcttctagtagttttatagttttaggtcttatgtttaaatctttaatccatcttgagctgatttttgtatatggtgagagat-ggggtccagtttcattcttctgcatatggatatctaattttccc-agcaccagttattgaatagggtgtcctttcctcagtgtattttcttggcatctttgtcaaaaatcagttggctgtaaatacgtggatttatttctgggttctctatcctg s panTro5.chr5 5284568 354 - 181907262 ttttagtttaatatagtcccacttgtctatttttatttttgttgcctgtgcttttgaggtcttagccacaaaaatctctgtctagaccaatatcctgaagtgtttcccctgtatgttttcttctagtagttttatagttttaggtcttatgtttaaatctttaatccatcttgagctgatttttgtatatggtgagagat-ggggtccagtttcattcttctgcatatggatatctaattttccc-agcaccagttattgaatagggtgtcctttcctcagtgtattttcttggcatctttgtcaaaaatcagttggctgtaaatacgtggatttatttctgggttctctatcctg i panTro5.chr5 C 0 C 0 s panPan2.chr5 5546943 354 - 183735486 ttttagtttaatatagtcccacttgtctatttttatttttgttgcctgtgcttttgaggtcttagccacaaaaatctctgtctagaccaatatcctgaagtgtttcccctgtatgttttcttctagtagttttatagttttaggtcttatgtttaaatctttaatccatcttgagctgatttttgtatatggtgagagat-ggggtccagtttcattcttctgcatatggatatctaattttccc-agcaccagttattgaatagggtgtcctttcctcagtgtattttcttggcatctttgtcaaaaatcagttggctgtaaatacgtggatttatttctgggttctctatcctg i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1678726 354 + 3967317 ttttagtttaatatagtcccacttgtctatttttatttttgttgccagtgcttttgaggtcttagccacaaaaatctctgtctagaccaatatcctgaagtgtttcccctgtatgttttcttctagtagttttatagttttaggtcttatgtttaaatctttaatccatcttgagttgatttttgtatatggtgagagat-ggggtccagtttcattcttctgcatatggatatctaattttccc-agcaccagttattgaatagggtgtcctttcctcagtgtattttcttggcatctttgtcaaaaatcagttggctgtaaatacatggatttatttctgggttctctatcctg i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4503195 354 + 163208435 ttttagtttaatacagtcccatttgcctatttttatttttgttgcctgttcttttgaggtcttagccacaaaaatctctgtctagaccaatatcctgaagtgtttcccttgtatgttttcttctagtagttttatagttttaggtcttatgtttaaatctttaatccatcttgagttgatttttgtatatggtgagagat-ggggtccagtttcattcttctgcatatggatatccaattttccc-agcaccagttattgaacagggtgtcctttctccagtgtattttcttggcatctttgtcaaaaatcagttggctgtaaatacgtggatttatttctgggttctctatcctg i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5735817 353 - 180051392 ttttagtttaatgtagtcccatttgtctatttttatttttgttgcctatgcttttgagatcttaggcacaaaaatttctgtctagaccaatatcctgaagtgtttcccctatatgttttcttctagcagttttatagttttgggtcttatgtttaagtctttaatccatctcgagttgatttttgtgtatggtgagagat--gggtccagtttcattcttctgcatatgtatatccagttttccc-agcaccagttattgaatagggtgtcctttccccagtgtatgttcttggcatctttgtcaaaaatcagttggctgtaaatgcgtggatttatttctgggttctgtatcctg i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5921626 353 - 181584905 ttttagtttaatgtagtcccatttgtctatttttatttttgttgcctatgcttttgagatcttaggcacaaaaatttctgtctagaccaatatcctgaagtgtttcccctatatgttttcttctagcagttttatagttttgggtcttatgtttaagtctttaatccatctcgagttgatttttgtgtatggtgagagat--gggtccagtttcattcttctgcatatgtatatccagttttccc-agcaccagttattgaatagggtgtcctttccccagtgtatgctcttggcatctttgtcaaaaatcagttggctgtaaatacgtggatttatttctgggttctgtatcctg i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 950677 353 - 16193990 ttttagtttaatgtagtcccatttgtctatttttatttttgttgcctatgcttttgagatcttaggcacaaaaatttctgtctagaccaatatcctgaagtgtttcccctgtatgttttcttctagcagttttatagttttgggtcttatgtttaagtctttaatccatctcgagttgatttttgtgtatggtgagagat--gggtccagtttcattcttctgcatatgtatatccagttttccc-agcaccagttattgaatagggtgtcctttccccagtgtatgttcttggcatctttgtcaaaaatcagttggctgtaaatacgtggatttatttctgggttctgtatcctg i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1773653 353 - 21434487 ttttagtttaatgtagtcccatttgtctatttttatttttgttgcctatgcttttgagatcttaggcacaaaaatctctgtctagaccaatattctgaagtgtttcccctatatgttttcttctagcagttttatagttttgggtcttatgtttaagtctttaatccatctcgagttgatttttgtgtatggtgagagat--gggtccagtttcattcttctgcatatggatatccagttttccc-agcaccagttattgaatagggtgtcctttccccaatgtatgttcttggcatctttgtcaaaaatcagttggctgtaaatacgtggatttatttctgggttctgtatcctg i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4736976 353 - 82825804 ttttagtttaatatagtcccatttgtctatttttatttttgttgcctatgcttttgagatcttaggcacaaaaatctctgtctagaccagtatcctgaagtgtttcccctatatgttttcttctagcagttttatagttttgggtcttatgtttaagtctttaatccatctcaagttgatttttgtgtatggtgagagat--gggtccagtttcattcttctgcatatggatatccagttttccc-agcaccagttattgaatagggtgtcctttccccagtgtatgttcttggcatctttgtcaaacatcagttggctgtaaatacatggatatatttctgggttctgtatcctg i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 231896 353 + 2521317 ttttagtttaatgtagtcccgtttgtctatttttatttttgttgcctatgcttttgagatcttaggcacaaaaatctctgtctagaccaatatcctgaagtgtttcccctatatgttttcttctagcagttttatagttttgggtcttatgtttaagtctttaatccatctcgagttgatttttgtgtatgttgagagat--gggtccagtttcattcttctgcatatggatatccagttttccc-agcaccagttattgaatagggtgtcctttccccagtgtatgttcttggcatctttgtcaaacatcagttggctgtaaatacgtggatttatttctgggttctgtatcctg i manLeu1.NW_012103943v1 C 0 C 0 s calJac3.chr2 64065143 354 + 204313951 ttttagtataatatagtgctatttgtttatttttatttttgttgcctgtgcttttgaggtcttagccatcaaaatctctgtttagaccaatatcctgaagtgtttcccctacatgttttcttctagtagttttatagtttggggtcttatgtttaagtctttaatccatcttgagctgatttttgtatatggtgagatat-ggggtccagtttcattcttctgcatagggatatccaattttccc-agcaccagtgattgaatagagtgtcctttccccaatgtatgttcttggaatctttgtcaaaaatcagttgactgtaaatacgtggatttatttctgggttttctatcctg i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2193295 353 + 10068113 ttttactataatgtagttctatttgtctatttttatttttgttgcctgtgcttttgaggtcttagccaccaaaatctctgtctagaccaatatcctgaagtgtttcccctacatgttttcttctactagttttatagttttgggtcttatatttaagtcttaaatccatcttgagttgatttttgtatatggtgagatat-ggggtccagtttcattcttctgcatagggatatccaattttccc-agcaccagtgattgaatagggtgtcctttccccaatgtatgttcttggaatctttgtcaaaaatcagttgactgtaaatacgtggatttatttctgggttttct-CCCTG i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 48320 354 - 709587 ttttagtataacgtagtcctatttgtctatttttatttttgttgcctgtgtttttgaggtcttagccaccaaaatctctgtctagagcagtatcctgaagtgtttcccctacatgttttcttctagtagttttatagttttgggtcttatgtttaagtctttaaaccatcttgagttgatttttgtatatgatgagatat-ggggtccagtttcattcttctgcatagggatatccaattttccc-agcaccagtgattgaatagggtgtcctttccccagtgtatgttcttggaatctttgttaaaaatcagttgactgtaaatatgtggatttacttctgggttttctatcttg i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1149233 354 - 2246441 ttttagtataatatagtgctatttgtctatttttatttttgttgcctgtgcttttgaggtcttagccaccaaaatctctgtctagaccagtatcctgaagtgtttcccctacatgttttcttctagtagttttatagttttgggtcttatgtttaagtctttaatccatcttgaattgatttttgtatatggtgagatat-ggggtccagtttcattcttctgtgtagggatatccaattttccc-agcaccagtgattgaatagggtgtcctttccccagtgcatgttcttggaatctttgtcaaaaatcagttgaccgtaaatacgtggatttatttctgggttttctatcctg i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 754192 353 - 940639 ttttagtttaatatagtccccattttctatttttgtttttgttgcctgtgcttttgagttcttagctat-gaaatcattgtctagaccaatgtcctgaagtgtttttcct--atgttttcttctagtagtattatagttttgggtcttatgtttaattttttaatccatcttgagttgatttttgtatatggtgagagataggggtccagtttcatttttctgtgtatggcaacccaatttttccgagcaccgtttattgaagagggtgccattttcccaatgtatgtttttggtgcctttgttgaaaatcagttggctgtaaatacttggatctgtttctgagttctctattctg i proCoq1.NW_012152163v1 I 31128 C 0 e mm10.chr13 65979384 6914 - 120421639 I e otoGar3.GL873522 1215724 8145 + 48283576 I e canFam3.chr4 37163199 3942 + 88276631 I e dasNov3.JH562710 240138 2861 - 960158 I e colAng1.NW_012115755v1 1720219 3337 - 2415367 I a score=4141813.000000 s hg38.chr5_KI270795v1_alt 36372 377 + 131892 ------tgataattcttaaccaataacaaggtatatctccaggtttacggttgtcttttttaatactttaaatatattgctacattgtttgtcttc-ttgcttgcattgtttctgatgaaaaatttgtgttatcttcatctttatcc--ctctatatgtgaca---ttttccc-ctctattttaagattttct--ttattactggttttgaacaattttattatgatgtgtcttggtgtag-ttttattgatgtttcttgttcttggagtttattgagcttcttggatctgtgggtttgtggttttcatcaaatctagaaaatttaggatgttatttcttcaaatatttttctgtgtattcttttcttcaggaacttcagttgca-tgtatatt s panTro5.chr5 5284922 377 - 181907262 ------tgataattcttaaccaataacaaggtatatctccaggtttacggttgtcttttttaatactttaaatatattgctacattgtttgtcttc-ttgcttgcattgtttctgatgaaaaatttgtgttatcttcatcttcatcc--ctctatatgtgaca---ttttccc-ctctattttaagattttct--ttattactggttttgaacaattttattatgatgtgtcttggtgtag-ttttattgatgtttcttgttcttggagtttattgagcttcttggatctgtgggtttgtggttttcatcaaatctagaaaatttaggatgttatttcttcaaatatttttctgtgtattcttttcttcaggaacttcagttgca-tgtatatt i panTro5.chr5 C 0 C 0 s panPan2.chr5 5547297 377 - 183735486 ------tgataattcttaaccaataacaaggtatatctccaggtttacggttgtcttttttaatactttaaatatattgctacattgtttgtcttc-ttgcttgcattgtttctgatgaaaaatttgtgttatcttcatctttatcc--ctctatatgtgaca---ttttccc-ctctattttaagattttct--ttattactggttttgaacaattttattatgatgtgtcttggtgtag-ttttattgatgtttcttgttcttggagtttattgaccttcttggatctgtgggtttgtggttttcatcaaatctagaaaatttaggatgttatttcttcaaatatttttctgtgtattcttttcttcaggaacttcagttgca-tgtatatt i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1679080 377 + 3967317 ------tgataattcttaaccaataacaaggtatatctccaggtttacggttgtcttttttaatactttaaatatattgctacattgtttgtcttc-ttgcttgcattgtttctgatgaaaaatttgtgttatcttcatctttatcc--ctctatatgtgaca---tttcccc-ctctattttaagattttct--ttattactggttttgaacaattttattatgatgtgtcttggtgtag-ttttattgatgtttcttattcttggagtttattgagcttcttggatctgtgggtttatggttttcatcaaatctagaaaatttaggatgttatttcttcaaatatttttctgtgtattcttttcttcaggaacttcagttgca-tgtatatt i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4503549 377 + 163208435 ------tGATACTTCTTAACCAATAACAAGGTATATCTCCAGTTTTACGGttgtcttttttaatactttaaatatattgccccattgtttgttttc-ttgcttgcattgtttctgatgaaaaatttgtgttttcttcatctttatcc--ctctatatgtgaca---ttttccc-ctctattttaagattttct--ttattactggttttgaacaattttattatgatgtgtcttggtgtag-ttttattgatgtttcttgttcttggagtttattgagcttcttggatctgtgggtttatagttttcatcaaatctagaaaatttagggtgttatttcttcaaatacttttctgtgtattcatttcttcaggaacttcaattgca-tgtatatt i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5736170 381 - 180051392 ------tGATAATTCTTAACCAATAACAAGGTCTATCTCCAGGTTTATGGttgtcttttttaatactttaaatatattgctccattgtttgtcttctttgcttgcattgcttctgatgcaaacgttgtgttatcttcatctttatcctactctatatgtgaca---ttttccc-ctctattttaagattttct--ttattactggttttgagcaattttattatgatgtgtcttggtgtagtttttattgatgtttcttgttcttagagtttattgaacttcttggatctatgggtttataattttcatcaaatctagaaaatttaggatgttatttcttcaaatatttttctgtgtattcttttcttcagaaacttcaattgca-tgtatatt i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5921979 381 - 181584905 ------tGATAATTCTTAACCAATAACAAGGTCTATCTCCAGGTTTATGGttgtcttttttaatactttaaatatattgctccattgtttgtcttctttgcttgcattgcttctgatgcaaacgttgtgttatcttcatctttatcctactctatatgtgaca---ttttccc-ctctattttaagattttct--ttattactggttttgagcaattttattatgatgtgtcttggtgtagtttttattgatgtttcttgttcttagagtttattgagcttcttggatctatgggtttataattttcatcaaatctagaaaatttaggatgttatttcttcaaatatttttctgtgtattcttttcttcagaaacttcaattgca-tgtatatt i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 951030 381 - 16193990 ------tGATAATTCTTAACCAATAACAAGGTCTATCTCCAGGTTTATGGttgtcttttttaatactttaaatatattgctccattgtttgtcttctttgcttgcattgcttctgatgcaaacgttgtgttatcttcatctttatcctactctatatgtgaca---ttttccc-ctctattttaagattttct--ttattactggttttgagcaattttattatgatgtgtcttggtgtagtttttattgatgtttcttgttcttagagtttattgagcttcttggatctatgggtttataattttcatcaaatctagaaaatttaggatgttatttcttcaaatatttttctgtgtattcttttcttcagaaacttcaattgca-tgtatatt i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1774006 381 - 21434487 ------tGATAATTCTTAACCAATAAGAAGGTCTATCTCCAGGTTTATGGttgtcttttttaatactttaaatatattgctccattgtttgtcttctttgcttgcattgcttctgatgcaaacgttgtgttatcttcatctttatcctactctatatgtgaca---ttttccc-ctctattttaagattttct--ttattactggttttgagcaattttattatgatgtgtcttggtgtagtttttattgatgtttcttgttcttagagtttattgagcttcttggatctatgggtttataattttaatcaaatctagaaaatttaggatgttatttcttcaaatatttttctgtgtattcttttcttcagaaacttcaattgca-tgtatatt i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4737329 370 - 82825804 ------tGATAATTCTTAACCAATAACAAGGTCTGTCTCCAGGTTTATGGttgtcttttttaatactttaaatatgttgctccattgtttgtcttctttgctcgcattgcttctgatgcaaacttcgtgttatcttcatctttatcctactctatatgtgaca---tttcccc-ctctattttaagattttct--ttattactggttttgaacaattttatt----------ttggtgtag-ttttattgatgtttcttgttcttggagtttattgagcttcttggatctatgggtttatagttttcatcaaatctagaaaatttaggatgttatttcttcaaatatttttctgtgtattcttttcttcaggaacttcaattgca-tgtatatt i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 232249 381 + 2521317 ------tGATAATTCTTAACCAATAACAAGGTCTATCTCCAGGTTTATGGttgtcttttttaatactttaaatatattgctccattgtttgtcttctttgcttgcattgcttctgatgcaaacgttgtgttatcttcatctttatcctactctatatgtgaca---ttttccc-ctctattttaagattttct--ttattactggttttgagcaattttattatgatgtgtcttggtgtagtttttattgatgtttcttgttcttagagtttattgagcttcttggatctatgggtttataattttcatcaaatctagaaaatttaggatgttatttcttcaaatatttttctgtgtattcttttcttcagaaacttcaattgca-tgtatatt i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1723556 379 - 2415367 ------TGATAATTCTTAACCAGTAAAAAGGTACATCTTCAGGTTTATGGttgtctttttaaatactttaaatatattgcttcattgtttgtcttctttgcttgcattgcttctgatgcaaactttgtgttatcttcatctttatcctactctatatgtgaca---ttttccc-ctctattttaagattttct--ttgttactggtgttgaacaattttattatgatgtgtcttggtgtag-ttttattgatgtttcttgttcttggagtttattgagcttcttggatctatgggtttatag-tttcatcaaatctagaaaatttaggatgttatttcttcaaatatttttctgtgtattcttttcttcagaaacttcaattgca-tgtatatt i colAng1.NW_012115755v1 I 3337 C 0 s calJac3.chr2 64065497 375 + 204313951 ------tGATAATTCTTAACCAAT-ACAAGGCATATCTCTAGGTTTACAGttgtctttttaaatactttgaatatattgctccattgtttgtcttc-ttgcttgcatcgtttctgatgagaaatttgtgttatcttcatctttattc--ctctatatgtgaca---ttttcc--ctatactttaagattttct--ttattactggttttgaacaattttattatgatgtgtcttggtatag-tttaattgatgtttcttgttcttggagtttattgagcttcttggatctatggatttatagttttcatcaaatctagaacatttaggatgttatttcttcaaatatttttctgtgtattcttttcttcaggaacttcaattgca-tgtatatt i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2193648 377 + 10068113 ------TGATAATTCTTAACCAAT-ACAAGGCATATCTCTAGGTTTACAGTTGCCtttttaaatactttgagtatattgctccattgtttgtcttc-ttgcttgcattgtgtctgatgagaaatttgtgttatcgtcatctttattc--ctctatatgtgaca---ttttccctctctattttaagattttct--ttattactggttttgaacaactttattatgatgtatcttggtgtag-ttttattgatgtttcttgttcttggagtttattgagcttcttggatctatggatttatagttttcatcaaatctagaacatttaggatgttatttcttcaaatatttttctgtgtattcttttctttgggaacttcaattgca-tgtatatt i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 48674 375 - 709587 ------tGATAATTCTTAACCAAT-ACAAGGCATGTCTCTAGGTTTACAGTTGCCtttttaaatactttgaatatattgctccattgtttgtcttc-ttgcttgcattgtttctgatgagaaatttgtgttatcttcatctttattt--ctctatatgtgaca---ttttcc--ctctattttaagattttct--ttattactggttttgaacaattttattatgatgtgtcttggtctag-ttttattgatgtttcttgttcttggagtttattgagcttcttggatctatggatttatagttttcatcaaatctagaacatttaggatgttatttcttcaaatatttttctgtgtattcttttcttcgggaacttcaattgcg-tgtatatt i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1149587 375 - 2246441 ------tGATAATTCTTAACCAAT-ACAAGGCATATCTCTAGGTTTACAGttgtcttttaaaatactttgaatatattgatccattgtttgtcttc-ttgcttgcattgtttctgatgagaaatttgtgttatcttcatctttattc--ctctatatgtgaca---ttttcc--ctctattttaagattttct--ttattactgattttgaacaattttattatgatgtgtctgggtgtag-ttttattgatgtttcttgttcttggagtttattgagcttcttggatctatggatttatagttttcatcaaatctagaacatttaggatgttatttcttcaaatatttttctgtgtattcttttcttcgggaacttcaattgca-tgtatatt i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 754545 388 - 940639 taatattgattatttttaaccagtaacaAAGCATATCTCTAGGTTTAAGttttttctgtttgttactttaaatgtggtgctccattgtttgtcttc-ttgttagcattatttctgatgagaaatctgtgttatccttatctttgttc--cactatatgtgacatgctttcttc-ctctgttttaagattttcttcttcttattggttttgaacagttttattatgatgtatcttggtgtag-ttttcttgatatttcttgttcttggagttcgttgagcttgttagatctgtgggtttatagtttacat-aaatctagaaaatttttgatgttatttcttcaaatatttttctattcatcctcttcttcaggaactccaattgcattgtatatt i proCoq1.NW_012152163v1 C 0 I 9 e mm10.chr13 65979384 6914 - 120421639 I e otoGar3.GL873522 1215724 8145 + 48283576 I e canFam3.chr4 37163199 3942 + 88276631 I e dasNov3.JH562710 240138 2861 - 960158 I a score=129558.000000 s hg38.chr5_KI270795v1_alt 36749 12 + 131892 aggttgtttgaa s panTro5.chr5 5285299 12 - 181907262 aggttgtttgaa i panTro5.chr5 C 0 C 0 s panPan2.chr5 5547674 12 - 183735486 aggttgtttgaa i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1679457 12 + 3967317 aggttgtttgaa i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4503926 12 + 163208435 aggttgtttgaa i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5736551 12 - 180051392 aggttgtttgaa i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5922360 12 - 181584905 aggttgtttgaa i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 951411 12 - 16193990 aggttgtttgaa i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1774387 12 - 21434487 aggttgtttgaa i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4737699 12 - 82825804 aggttgtttgaa i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 232630 12 + 2521317 aggttgtttgaa i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1723935 12 - 2415367 aggttgtttgaa i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64065872 12 + 204313951 aggctgtttgaa i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2194025 12 + 10068113 aggctgtttgaa i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 49049 12 - 709587 aggctgtttgaa i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1149962 12 - 2246441 aggctgtttgaa i aotNan1.NW_018501968v1 C 0 C 0 e mm10.chr13 65979384 6914 - 120421639 I e otoGar3.GL873522 1215724 8145 + 48283576 I e canFam3.chr4 37163199 3942 + 88276631 I e proCoq1.NW_012152163v1 754933 9 - 940639 I e dasNov3.JH562710 240138 2861 - 960158 I a score=3413061.000000 s hg38.chr5_KI270795v1_alt 36761 315 + 131892 gttgttccatggttt------actggcattcctttc--attttttaagc-catttttcctttgtgtgatttattttggatagtttctattgctgtgtc-tttaagttcactaatattttctcctgcaatgactaatctgctgttaatcccatatagtatattttccatttcaaacattgcagttttcatctctaaaaattcaatttcggtctataaaaatataccttccatgtgtctggttaacttttt-aaaaatatggaatattttcaa---aatattataatataatacaatatgctaaaatatagtaac--ataatgtccttctttg s panTro5.chr5 5285311 315 - 181907262 gttgttccatggttt------actggcattccttta--attttttaagc-catttttcctttgtgtgatttattttggatagtttctattgctgtgtc-tttaagttcactaatattttctcctgcaatgactaatctgctgttaatcccatatagtatattttccatttcaaacattgcagttttcatctctaaaaattcaatttcggtctataaaaatataccttccatgtgtctggttaacttttt-aaaaatatggaatattttcaa---aatattataatataatacaatatgctaaaatatagtaac--ataatgtccttctttg i panTro5.chr5 C 0 C 0 s panPan2.chr5 5547686 315 - 183735486 gttgttccatggttt------actggcattccttta--attttttaagc-catttttcctttgtgtgatttattttggatagtttctattgctgtgtc-tttaagttcactaatattttctcctgcaatgactaatctgctgttaatcccatatagtatattttccatttcaaacattgcagttttcatctctaaaaattcaatttcggtctataaaaatataccttccatgtgtctggttaacttttt-aaaaatatggaatattttcaa---aatattataatataatacaatatgctaaaatatagtaac--ataatgtccttctttg i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1679469 317 + 3967317 gttgttccatggttt------actggcattcctttc--attttttaagc-catttttcctttgtgtgatttattttggatagtttctattgctgtgtc-tttaagttcactaatattttctcctgcaatgactaatctgctgttaatcccatatagtatattttccatttcaaacattgtagttttcatctctaaaaattcagtttcggtctataaaaatataccttccatgtgtctggttaacttttt-aaaaatatggaatattttcaa-atattataataatataatacaatatgctaaaatatagtaac--ataatgtccttctttg i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4503938 318 + 163208435 attgttccgtggttt------cctggcattcctttc--attttttaaac-catttttcctttgtgtgatttattttggatagtttctattgctgtatc-tttaagttcactaatattttctcctgcaacgactaatctgttgttaatcccatctagtatattttccatttcaaacattgtagttttcatctctaaaaattcaatttgggtctataaaaatataacttccatgtgtctggttaacttttt-aaaaatatggaatattttcaaaacattataataatataatacaatatgctaaaatatagtaac--ataatgcccttctttg i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5736563 318 - 180051392 gttgttccatggttt------actggcattccttac--atttttaatac-catttttcctttctgtgatttattttggatagtttctattgctgtgtc-tttaagttcactaatattttctcctgcaatgactaatctgctgttaatcctatctagtatattttccatttcaaacattgtagttttcatctctaaaaattcaatttgggtctataaaaatatatcttccgtgtgtctggttaacttttt-aaaaatatggaatattttcaaaatattataataacataatacaatacgctaaaatatagtaac--ataatgtccttctttg i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5922372 318 - 181584905 gttgttccatggttt------actggcattccttac--atttttaatac-catttttcctttctgtgatttattttggatagtttctattgctgtgtc-tttaagttcactaatattttctcctgcaatgactaatctgctgttaatcctatctagtatattttccatttcaaacattgtagttttcatctctaaaaattcaatttgggtctataaaaatatatcttccgtgtgtctggttaacttttt-aaaaatatggaatattttcaaaatattataataacataatacaatacgctaaaatatagtaac--gtaatgtccttctttg i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 951423 319 - 16193990 gttgttccatggttt------actggcattccttac--atttttaatac-catttttcctttctgtgatttattttggatagtttctattgctgtgtcttttaagttcactaatattttctcctgcaatgactaatctgctgttaatcctatctagtatattttccatttcaaacattgtagttttcatctctaaaaattcaatttgggtctataaaaatatatcttccgtgtgtctggttaacttttt-aaaaatatggaatattttcaaaatattataataacataatacaatacgctaaaatatagtaac--gtaatgtccttctttg i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1774399 318 - 21434487 gttgttccatggttt------actggcattccttac--atttttaatac-catttttcctttctgtgatttattttggatagtttctattgctgtgtc-tttaagttcactaatattttctcctgcaatgactaatctgctgttaatcctatctagtatattttccatttcaaacattgtagttttcatctctaaaaattcaatttgggtctataaaaatatatcttccgtgtgtctggttaacttttt-taaaatatggaatattttcaaaatattataataacataatacaatacgctaaaatatagtaac--gtaatgttcttctttg i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4737711 318 - 82825804 gttgttccatggttt------attggcattcctttc--attttttaaac-catttttcctttctgtgatttattttggatagtttctattgctgtgtc-tttaagttcactaatattttctcctgcaatgactaatctgctgttaatcctatctagtatattttccatttcaaacattgtagttttcatctctaaaaattcaatttgggtctataaaaatatatcttccgtgtgtctggttaacttttt-aaaaatatggaatattttcaaaatattataataacataatacaatatgctaaaatatagtaac--gtaatgtccttctttg i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 232642 318 + 2521317 gttgttccatggttt------actggcattccttac--atttttaatac-catttttcctttctgtgatttattttggatagtttctattgctgtgtc-tttaagttcactaatattttctcctgcaatgactaatctgctgttaatcctatctagtatattttccatttcaaacattgtagttttcatctctaaaagttcaatttgggtctataaaaatatatcttccgtgtgtctggttaacttttt-aaaaatatggaatattttcaaaatattataataacataatacaatacgctaaaatatagtaac--gtaatgtccttctttg i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1723947 318 - 2415367 gttgttccatggttt------actggcattccttac--attttttaaac-catttttcctttctgtgatttattttggatagtttctattgctgtgtc-tttaagttcactaatattttctcctgcaatgactaatctgctgttaatcctatctagtatattttccatttcaaacattgtagttttcatctctaaaaattcagtttgggtctataaaaatatatcttccacgtgtctggttaatttttt-taaaatatggagtattttcaaaatattgtaataatataatacaatatgctaaaatatagtaac--gtaatgtccttctttg i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64065884 317 + 204313951 gttgttccatggttt------actgg-gttccttttattttttttaaat-gatttttcctttgtgtgttttattttggatagtttctattgctgtgtc-tttaagttcactaatattttctcctgcagtgactaatctgctgttaatctcatcaagtatattttttatttcaaacattatagttttcatctctaaaaattcaatttgggtctataaaaatatactttccatgtgtctagttaactttta-aaaaatatagaatgttttcaaaatattataataatataatacaatatgctaaaatatagtaac----aatgtccttctttg i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2194037 320 + 10068113 gttgttccatggtttggaacaactggagttcctttta-tttttttaaac-tattttttctttgtgagatttattttggatagtttctattgctgtgtc-tttaagttcactaaccttttctcctgcaatgactaatctgctgttaatctcatcaagtatatttttcatttcaaacattgtagttttcatctctaaaaattcaatttgggtctataaaagtatactttccatgtatctagttaactttta-aaaaatatagaatattttcaaaatattgta-----ataatacaatatgctaaaatatagtaac--ttaatgtccttcttcg i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 49061 319 - 709587 gttgttccatggttt------actggggttcctttta-tttttttaaac-tatttttcctttgtgcgatttattttggatagtttctattgctgtgtc-tttaagttcactaatattttctccagcaatgactaatctgctgttaatctcatcaggtatatttttcatttcaaacattgtagttttcatctctagaaattcaacttgggtctataaaaatatactttccatgtgtctagttaactttta-aaaaatatagaatattttcaaaatattataataatataatacaatatgctaaaatatagtaac--ttaatgcccttctttg i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1149974 318 - 2246441 gttattccatggttt------actggggttcctttt--tttttttaaac-tatttttcctttgtgagatttattttggatagtttctattgctgtgtc-tttaagttcactaatgttttctcctgcaatgactaatctgctgttaatctcatcaagtatattttttatttcaaacattgtagttttcatctctaaaaattcaatttgagtctataaaaatatgctttccatgtgtctagttaactttta-aaaaatatagaatattttcaaaatattataataatataatacaatatgctaaaatatagtaac--ttaatgtccttctttg i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 754942 295 - 940639 ttagttctatgggtt------actggcactctttct--attttttaaaagtatttttcctctgtgtattttattttggacagtttctatttctatgtc-tttaagttcactaatattttctcctgcaatgactaatctgctgttaatcccatctggtgtatttttcatctcagatattgcagtttttatctctaaaaattcagtttgggtctttaaaaatatatcttccatgtgtc-----aactttttaaaaaatatggaatattttcaa---------------------aatatattaaaatataataacttttaatgtcctt-tttg i proCoq1.NW_012152163v1 I 9 C 0 e mm10.chr13 65979384 6914 - 120421639 I e otoGar3.GL873522 1215724 8145 + 48283576 I e canFam3.chr4 37163199 3942 + 88276631 I e dasNov3.JH562710 240138 2861 - 960158 I a score=1741206.000000 s hg38.chr5_KI270795v1_alt 37076 149 + 131892 ctcgttctgatattcatgttagttctagattggttatgattgattttgtgccttattatgggttatgttttcctgctcttttttatgcct--attagtctcttattggatgtcatgcattgtgaattttaccttgt--gttgctagctatttt s panTro5.chr5 5285626 149 - 181907262 ctcgttctgatattcatgttagttctagattggttatgattgattttttgccttattatgggttatgttttcctgctcttttttatgcct--attagtctcttattggatgtcatgcattgtgaattttaccttgt--gttgctagctatttt i panTro5.chr5 C 0 C 0 s panPan2.chr5 5548001 149 - 183735486 ctcgttctgatattcatgttagttctagattggttatgattgattttttgccttattatgggttatgttttcctgctcttttttatgcct--attagtctcttattggatgtcatgcattgtgaattttaccttgt--gttgctagctatttt i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1679786 149 + 3967317 ctcgttctgatattcatgttagttctagattggttatgactgattttttgccttattatgggttatgttttcctgctcttttttatgcct--attagtctcttattggatgtcatgcattgtgaattttaccttgt--gttgctagctatttt i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4504256 149 + 163208435 ctcgttctgatattcgtgttagttctagattggttatgatttattttttgctttattatgggttatgttttcctgctcttttttatgcct--gttagtctcttattggatgtcatgcattgtgaattttaccttgt--gttgctagctatttt i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5736881 148 - 180051392 ctcattctgatattcatgttagttctagattggttatgattgatttt-tgccttattatgggttatgttttcctgctcttttttatgtct--attagtctcttattggatgtcatgcattgtgaatttttccttgt--gttgctagctatttt i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5922690 148 - 181584905 ctcattctgatattcatgttagttctagattggttatgattgatttt-tgccttattatgggttatgttttcctgctcttttttatgtct--attagtctcttattggatgtcatgcattgtgaatttttccttgt--gttgctagctatttt i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 951742 148 - 16193990 ctcattctgatattcatgttagttctagattggttatgattgatttt-tgccttattatgggttatgttttcctgctcttttttatgtct--attagtctcttattggatgtcatgcattgtgaatttttccttgt--gttgctagctatttt i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1774717 148 - 21434487 ctcattctgatattcatgttagttctagattggtaatgattgatttt-tgccttattatgggttatgttttcctgctcttttttatgtct--attagtctcttattggatgtcatgcattgtgaatttttccttgt--gttgctagctatttt i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4738029 148 - 82825804 ctcattctgatattcatgttagttctagattggttatgattgatttt-tgcctcattatgggttatgttttcctgctcttttttatgtct--attagtctcttattggatgtcatacattgtgaatttttccttgt--gttgctagctatttt i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 232960 148 + 2521317 ctcattctgatattcatgttagttctagattggttatgattgatttt-tgccttattatgggttatgttttcctgctcttttttatgtct--attagtctcttattggatgtcatgcattgtgaatttttccttgt--gttgctagctatttt i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1724265 126 - 2415367 gtcattctgatgttcatgttagttctagattggtt-----------------------tgggttatgttttcctgttcttttttatgcct--attagtctcttattggatgtcatgcattgtgaatttttccttgt--gttgctagctatttt i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64066201 151 + 204313951 cttgttctgatattcatgttagttctagattggctatgactgattttttgcctcactatgggttatgttttcctgctcttttttatgcct--attagtctcttattggataacatgcattatgaattttaccttgttggttgctagctatttc i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2194357 151 + 10068113 ctcgttctgatattcatgttagttctagattggttatgactgattttttgcctcactatgggttatgttttcctgctcttttttatgctt--attagtctcttactggatatcatgcattatgaattttaccttgttggttgctagctatttc i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 49380 151 - 709587 ctcgttctgatattcatgttagttctagattggttatgactgattttttgcctcactatgggttatattttcctgctcttttttatgcct--attagtctcttattggatatcatgcattatgaattttaccttgttggttgctagctatttc i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1150292 153 - 2246441 ctctttctggtattcatgttagttctagattggttatgactgattttttgcctcactatgggttatgttttcctgctcttttttatgccttatttagtctcttattagatatcatgcattatgaattttaccttgttggttgctagctatttc i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 755237 144 - 940639 ctcattctaatatccatgttagttctagagtggcc-------atttttctcctcgttatgggttacattttcctgcttcttttcatgcct--cctagtctcttattggataccaaacattgtgaattttactttgttggttgctggctatttt i proCoq1.NW_012152163v1 C 0 C 0 s canFam3.chr4 37167141 151 + 88276631 cttattctaacatttgtgttggctctagactgattttgatggatgtttcttctcattgtgggtcatattttcctgcttctttgcatgcct--ataaatctcttattggatatcaaacattgtgagttttacctggttggttgctggctgtttt i canFam3.chr4 I 3942 C 0 e mm10.chr13 65979384 6914 - 120421639 I e otoGar3.GL873522 1215724 8145 + 48283576 I e dasNov3.JH562710 240138 2861 - 960158 I a score=4261689.000000 s hg38.chr5_KI270795v1_alt 37225 360 + 131892 agtattcc-taaaaatgttccttagctttgttttaaaaagcagttaaatcatttgaaaacagttt-atttttt-tgtcttgctttgaagatgagttgtacaagaccatag-ctgtatgtggtgttgggctggttatccctcactatgaaggcaag--cctctgagtactctactgaatgccctgtggagcttggggctttacaatctggctggtaggaacaggcgctattcctggccc----tcagaacctgaagctgtt-ccctcagatgccctt---gaatgtttttttcccctggccttggataat--------------gcat----gtactgctcagtgctttgctacatactct---gggggactcgtcaggtagctccagagttctct s panTro5.chr5 5285775 360 - 181907262 agtattcc-taaaaatgttcctgagctttgttttaaaaagcagttaaatcatttgaaaacagttt-atttttt-tgtcttgctttgaagatgagttgtacaagaccatag-ctgtatgtggtgttgggctggttatccctcactatgaaggcaag--cctctgagtactctacagaatgccctgtggagcttggggctttacaatctggctggtaggaacaggcgctattcctggccc----tcagaacctgaagctgtt-ccctcaggtgcccct---gaatgtttttttcccctggccttggataat--------------gcag----gtactgctcagtgctttgctacatactct---gggggactggtcagatagctccagagttctct i panTro5.chr5 C 0 C 0 s panPan2.chr5 5548150 360 - 183735486 agtattcc-taaaaatgttcctgagctttgttttaaaaagcagttaaatcatttgaaaacagttt-atttttt-tgtcttgctttgaagatgagttgtacaagaccatag-ctgtatgtggtgttgggctggttatccctcactatgaaggcaag--cctctgagtactctactgaatgccctgtggagcttggggctttacaatctggctggtaggaacaggcgctattcctggccc----tcagaacctgaagctgtt-ccctcagatgcccct---gaatgtttttttcccctggccttggataat--------------gcag----gtactgctcagtgctttgctacatactct---gggggactggtcagatagctccagagttctct i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1679935 358 + 3967317 agtattcc-taaaaatgttcctgagctttgttttaaaaagcagttaaatcatttgaaaacagttt-atttttt-tgtcttgctttgaagatgagttgtacaagaccgtag-ctgtatgtggtgttgggctggttatccctcactatgaaggcaag--cctctgagtactctactgaatgccctgcggagctt-gggctttacaatctggctggtaggaacaggcgctattcctggccc----tcagaacctgaagctgtt-ccctcagatgccctt---gaatg-atttttcccctggccttggataat--------------gcat----gtactgctcagtgctttgctacatactct---gggggactcgtcaggtagctccagagttctct i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4504405 356 + 163208435 agtattca-taaaagtgttcctgagctttgttttaaaaagcggttaaatcgtttgaaaacagatt-attttttgtgtcttgctttgaagatgagctgtacaagaccatag-ctatatgtagtg-cgggctaattatccctcactatgaaggcaag--cctctgagtatactcctgaatgccctgtggagcttgaggctttacaatctgactggt----acaggcgctattcctggccc----tcagaacctgaagctgtt-ccctcaaatgccctt---gaatgttttttttccctggccttggataat--------------gcat----gtactgctcagtgctttgctacatactct---gggggactcctcagatagctccagagttctct i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5737029 355 - 180051392 agtattcc-taaaaatgttcctgaactttgttttaaaaagcagttaaatcatttgaaaacagttt-atttttcgtgtcttgctttgaagatgacttgtacaagaccatag-ctatatgt------aggctagttatccctcactatgaaggcaag--cctctgagtactctactgaatgccctgtggatcttgaggctttacaatctggctggtaggaacaggcactattcctggccc----tcagaacctgaagctgtt-ccctcaaatgccctt---gaatgtttttttcccctggccttggataat--------------gcat----gtactgctcagtgctttgctgaatactct---ggggaactcgtcagagagctccagagttctct i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5922838 355 - 181584905 agtattcc-taaaaatgttcctgaactttgttttaaaaagcagttaaatcatttgaaaacagttt-atttttcgtgtcttgctttgaagatgacttgtacaagaccatag-ctatatgt------aggctagttatccctcactatgaaggcaag--cctctgagtactctactgaatgccctgtggatcttgaggctttacaatctggctggtaggaacaggcactattcctggccc----tcagaacctgaagctgtt-ccctcaaatgccctt---gaatgtttttttcccctggccttggataat--------------gcat----gtactgctcagtgctttgctgaatactct---ggggaactcgtcagagagctccagagttctct i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 951890 355 - 16193990 agtattcc-taaaaatgttcctgaactttgttttaaaaagcagttaaatcatttgaaaacagttt-atttttcgtgtcttgctttgaagatgacttgtacaagaccatag-ctatatgt------aggctagttatccctcactatgaaggcaag--cctctgagtactctactgaatgccctgtggatcttgaggctttacaatctggctggtaggaacaggcactattcctggccc----tcagaacctgaagctgtt-ccctcaaatgccctt---gaatgtttttttcccctggccttggataat--------------gcat----gtactgctcagtgctttgctgaatactct---ggggaactcgtcagagagctccagagttctct i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1774865 361 - 21434487 agtattcc-taaaaatgttcccaaactttgttttaaaaagcagttaaatcatttgaaaacagttt-atttttcgtgtcttgctttgaagatgacttgtacaagaccatag-ctatatgtagtgtcaggctagttatccctcactatgaaggcaag--cctctgagtactctactggatgccctgtggatcttgaggctttacaatctggctggtaggaacaggcactattcctggccc----tcagaacctgaagctgtt-ccctcaaatgccctt---gaatgttttttttccctggccttggataat--------------gcat----gtactgctcagtgctttgctgaatactct---ggggaactcgtcagagagctccagagttctct i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4738177 360 - 82825804 agtattcc-taaaaatgttcccaaactttgttttaaaaagcagttaaatcatttgaaaacagttt-atttttcgtgtcttgctttgaagatgacttgtacaagagcatag-ctatatgtagtgtcaggctagttatccctcactatgaaggcaag--cctctgagtactctactgaataccctgtggatcttgaggctttacaatctggctggtaggaacaggcactattcctggccc----tcagaacctgaagctgtt-ccctcaaatgccctt---gaatg-tttttttccctggccttggatagt--------------gcat----gtactgcttagtgctttgctgaatactct---ggggaactcgtcagaaagctccagagttctct i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 233108 361 + 2521317 agtattcc-taaaaatgttcccgaactttgttttaaaaagcagttcaatcatttgaaaacagttt-atttttcgtgtcttgctttgaagatgacttgtacaagaccatag-ctatatgtagtgtcaggctagttatccctcactatgaaggcaag--cctctgagtactctactgaatgccctgtggatcttgaggctttacaatctggctggtaggaacaggcactattcctggccc----tcagaacctgaagctgtt-ccctcaaatgccctt---gaatgttttttttccctggccttggataat--------------gcat----gtactgctcagtgctctgctgaatactct---ggggaactcgtcagagagctccagagttctct i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1724391 361 - 2415367 agtattcc-taaaaatgttactgagctttgttttaaaaagcagttaaatcatttgaaaacagttt-atttttcgtgtcttgctttgaagatgacttgtacaagaccatag-ctatatgtagtgtcaggctagttatccctcactatgaaggcaag--cctctgagtactctcctgtttgccctgtggatactaaggctttacaatctggctggtaggaacaggcaccattcctggccc----tcagaacctgaagctgtt-ccctcaaatgccctc---gaatgttttttttccctggccttggatagt--------------gcat----gtactgctcagtgctttgctgaatactct---ggggaactcgtcagagtgctccagagttctct i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64066352 363 + 204313951 agtattcc-taaaaatgttcttgagctttgtttaaaaaagcagtgaaattatttgaaaacagtct-attttttgtgtcttgctttgaagatgagttgtacagaaccatag-ctgtttatagtgttaggctagttatccctcactatgaaggcaaa--cctctgagtactctactgaatgccctgtggagcttgaggctttacaatctggctgggaggaacaggcactattactggctt----tcagaacctgaagctgtt-acctcaactgccctt---gaatg-cttattcccctggccttggataat--------------gcat----gtactgctcagtgctttgccaaatactctggggggggactcatcagatagctccagagttctct i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2194508 361 + 10068113 agtattcc-taaaaatgttcttgagctttgttttaaaaagcagtgaaattatttgaaaacagttt-attttttgtgtcttgttttgaaaatgagttgtacaagagcatag-tgatatataatgttaggctagttatccctcactatgtaggcaaa--cctctgactactctactgaatgccctgtggagcctgaggctttacaatctggctgggaggaacaggcactattaccggccc----tcagaacctgaagctgtt-accttaaatgtcctt---gaatg-cttttttccctggccttagataat--------------gcat----gtattgctcagtgctttgctaaatactct--ggggggactcatcagatagctccggagttctct i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 49531 361 - 709587 agtattcc-taaaaatgttcttgagctttgttttaagaagtagtgaaattatttgaaaacagttt-attttttgtgtcttgctttgaagatgagttgtacaagaccacag-ctgtatatggtgttaggctagttatccctcactatgaaggcaaa--cctctgactactctactgaatgccctgtggagcttgagcctttacaatctggctgggaggaacaggcactattactggccc----tcagaacctgaagctgtt-acctcaaatgccctt---gaatg-cttttttccctggccttggataat--------------gcat----gtactgctcagtgctttgctaaatactct--ggggggactcatcagatagctccagagttctct i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1150445 361 - 2246441 agcattcc-taaaaatgttcttgagctttgttttaaaaagcagtgaaattatttgaaaacagttt-attttttgtgtcttgctttgaagatgagttgtataagaccatag-ctgtatatagtgttaggctagttatccctcactatgaaggcaaa--tctctgagtactctactgaatgccctgtggagcttgaggctttacaatctggctgggaggaacaggcactattactggccc----tcagaactggaagctgtt-acctcaaatgccctt---gaatg-cttttttccccagccttggataat--------------gcat----gtactgctcagtgctttgctaaatgctct--ggggggactcaacagatagctccagagttctct i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 755381 355 - 940639 agtatttc-taaaaatgttcttgagc-ttgttttgaaaagcagttaaattacttgaaaacagttt-atattttgtgtctttctttgaattttagttgtataggaccagag-caatgtatagtgaagggctaattattcctcagtatgaaagcaag--cctctgagaattctactgaataccctatggagcttgagcttttcccgtctggttggtggaaacaggcactattcctggccc----ccagtaccaggagct----------aatcatctt---gaatg--attcttccagggccttggataat--------------gcatgcaggcactgctcagtgctctgctaaatactcc-aggggggactcgccaggtatcttcagagttctct i proCoq1.NW_012152163v1 C 0 I 29 s canFam3.chr4 37167292 363 + 88276631 aatatttc-tacaaaaagtcttgagctttattttagaaagcagtttaattacttgaaaacagttt-attttttgtatttcgctttcaagatta-ctacataggagcagagcctgtat-tagtgaagggctaattgttcct---tacaaaggcagg--actgtgagtgttctacctaa-actttgtgaatcttggggccttacagaccagatggtaggaacaggcatggttcccagcct-gtgcaagggcccacagttg-t-ccctcaaacactctcacaggatg--agtctttctgggcctcagctagtttcctcacatactcacat----gcattgctcagtgctttgctaaaggctcc---aggggcctccacagctttcccc---------- i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 242999 383 - 960158 agtattctaaaaaaatattcttgagatttgctttgaaaggaggttaaattacttaaaagcaatttgagttttaaagtcttcctttcaagattggttatatgacaccagaa-ctgtgttcagaatagggctaatgactaccccctacaaaggcaagatcctgtgaatgctctgcccaatgtctcatggaacttgaggtttcacagtcttgctagtagaaatgggcactattcctggtcctgtgtaattactggaaactgttcccctctaatcctctc---agatg-gttcttcccctagcctcgggtagtttcctcacatgcgtgctt----gcactgctcagtgctccactggataatca---agaagagccttcagagatctccagggttctct i dasNov3.JH562710 I 2861 I 4 e mm10.chr13 65979384 6914 - 120421639 I e otoGar3.GL873522 1215724 8145 + 48283576 I a score=284623.000000 s hg38.chr5_KI270795v1_alt 37585 24 + 131892 gtgtagctgtatactctttagaat s panTro5.chr5 5286135 24 - 181907262 gtgtagctgtatactctttagaat i panTro5.chr5 C 0 C 0 s panPan2.chr5 5548510 24 - 183735486 gtgtagctgtatactctttagaat i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1680293 24 + 3967317 gtgtagctgtatactctttggaat i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4504761 24 + 163208435 gtgtagctgtatactctttagaat i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5737384 24 - 180051392 gtgtagctgtatactctttagaat i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5923193 24 - 181584905 gtgtagctgtatactctttagaat i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 952245 24 - 16193990 gtgtagctgtatactctttagaat i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1775226 24 - 21434487 gtgtagctgtatactctttagaat i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4738537 24 - 82825804 gtgtagctgtatactctttagaat i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 233469 24 + 2521317 gtgtagctgtatactctttagaat i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1724752 24 - 2415367 gtgtagctgtatactctttagaat i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64066715 24 + 204313951 gtgtagctgtatactctttggaat i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2194869 24 + 10068113 gtgtagctgtatactctttggaat i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 49892 24 - 709587 gtgtagctgtatactctttggaat i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1150806 24 - 2246441 gtgtagctgtatactctttggaat i aotNan1.NW_018501968v1 C 0 C 0 s canFam3.chr4 37167655 23 + 88276631 atgta-ctcacttctctctggcac i canFam3.chr4 C 0 I 1 s dasNov3.JH562710 243386 24 - 960158 gtgtagctctcttctctgcagtat i dasNov3.JH562710 I 4 I 1 e mm10.chr13 65979384 6914 - 120421639 I e otoGar3.GL873522 1215724 8145 + 48283576 I e proCoq1.NW_012152163v1 755736 29 - 940639 I a score=3057876.000000 s hg38.chr5_KI270795v1_alt 37609 274 + 131892 ctgccctgcacactgcagacacctaagtatctacag------acttctgtct-cc-c-aactcaaat--t--ttgcagacctctgcc--ttgctt--ctct--ccctccctgccctac-agcctgga----cac----tcc----aggcagcgaggcagggcagctgtag-gctcactttgtttgttttctgtctcacagggattattgtcatt----------tgttgcctgatgacc----actggcctgaaaactgttgtttca-tg------ta--tttttttttctggctttttggttgtgtcaggta--agagtaaatcc-ataccc s panTro5.chr5 5286159 276 - 181907262 ctgccctgcacactgcagacacctaagtatctacaa------acttctgtct-cc-c-aactcaaat--t--ttgcagacctctgcc--ttgctt--ctct--ccctccctgccctac-agcctgga----cac----tcc----aggcagcgaggcagggcagctgcag-gttcactttgtttgttttctgtctcacagggattattgtcatt----------tgttgcctgatgacc----actggcctgaaaactgttgtttca-tg------ta--tttttttttctggctttttggttgtgtcaggtaagagagtaaatcc-ataccc i panTro5.chr5 C 0 C 0 s panPan2.chr5 5548534 275 - 183735486 ctgccctgcacactgcagacacctaagtatctacaa------acttctgtct-cc-c-aactcaaat--t--ttgcagacctctgcc--ttgctt--ctct--ccctccctgccctac-agcctgaa----cac----tcc----aggcagcgaggcagggcagctgcag-gctcactttgtttgttttctgtctcacagggattattgtcatt----------tgttgcctgatgacc----actggcctgaaaactgttgtttca-tg------ta---ttttttttctggctttttggttgtgtcaggtaagagagtaaatcc-ataccc i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1680317 276 + 3967317 ctgccctgcacactgcagacacctaagtatctacaa------acttctgtct-cc-c-aactcaaat--t--ttgcagacctctgcc--ttgctt--ctct--ccctccctgccctac-agcctgga----cac----tcc----aggcagcgaggcagggcagctgtag-gctcactttgtttgttttctgtctcacagggattattgtcatt----------tgttgcctgatgacc----actggcctgaaaactgttgtttca-tg------ta--tttttttttctggctttttggttgtgtcaggtaagagagtaaatcc-ataccc i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4504785 278 + 163208435 ctgccttgcacactgcagacaccttagtgtctacaa------agttctgtct-cc-c-acctcacat--t--tggcagtcctctacc--ttgctt--ctct--ccctccctgccctac-agcctgga----cac----tcc----aggcagcgaggcagggcagctgtag-gctcactttgtttgttttctgtctcacagggattattgtcatt----------tgttgcctgatgacc----actggcctgaaaactgttgtttca-tg------tatttttttttttctggctttttggttatgtcaggtaagagagtaaatcc-ataccc i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5737408 280 - 180051392 ctgccctgcacactgcagacaccttagtatctacaa------agttctgtcc-cc-c-aactcagat--t--tggcagacctctgcc--ttgctttcctct--ccctccctgccctac-cgcctgga----cac----gcc----aggcagcgaggcagggcagctgtag-gctcactttgtttgttttctgtctcacagggattattatcatt----------tgttgcctgatgacc----actggcctgaaaactgttttttca-tg------tatttttttttttctggccttttggttatgtcaggtaagagagtaaatcc-ataccc i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5923217 280 - 181584905 ctgccctgcacactgcagacaccttagtatctacaa------agttctgtcc-cc-c-aactcagat--t--tggcagacctctgcc--ttgctttcctct--ccctccctgccctac-cgcctgga----cac----gcc----aggcagcgaggcagggcagctgtag-gctcactttgtttgttttctgtctcacagggattattatcatt----------tgttgcctgatgacc----actggcctgaaaactgttttttca-tg------tatttttttttttctggccttttggttatgtcaggtaagagagtaaatcc-ataccc i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 952269 283 - 16193990 ctgccctgcacactgcagacaccgtagtatctacaa------agttctgtcc-cc-c-aactcagat--t--tggcaggcctctgcc--ttgctttcctct--ccctccctgccctac-cgcctgga----cac----gcc----aggcagcgaggcagggcagctgtag-gctcactttgtttgttttctgtctcacagggattattatcatt----------tgttgcctgatgacctgaaaaatacctgaaaactgttttttca-tg------ta-ttttttttttctggccttttggttatgtcaggtaagagagtaaatcc-ataccc i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1775250 280 - 21434487 ctgccctgcacactgcagacaccttagtatctacaa------agttctgtcc-cc-c-aactcagat--t--tggcagacctctgcc--ttgctttcctct--ccctccctgccctac-cgcctgga----cac----gcc----aggcagcgaggcagggcagctgtag-gctcactttgtttgttttctgtctcacagggattattatcatt----------tgttgcctgatgacc----actggcctgagaactgttgtttca-tg------tatttttttttttctggctttttggttatgtcaggtaagagagtaaatcc-ataccc i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4738561 280 - 82825804 ctgccctgcacactgcagacaccttagtgtctacaa------agttctgtcc-cc-c-aactcagac--t--tggcagacctctgcc--ttgctttccttt--ccctccctgccctac-cgcctggt----cac----gcc----aggcagcgaggcagggcagctgtag-gctcactttgtttgttttctgtctcacagggattattatcatt----------tgttgcctgatgacc----actggcctgaaaactgttgtttca-tg------tattttttattttctggctttttggttatgtcaggtaagagagtaaatcc-ataccc i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 233493 279 + 2521317 ctgccctgcacactgcagacaccttagtatctacaa------agttctgtcc-cc-c-aactcagat--t--tggcagacctctgcc--ttgctttcctct--ccctccctgccctac-cgcctgga----cac----gcc----aggcagcgaggcagggcagctgtag-gctcactttgtttgttttctgtctcacagggattattatcatt----------tgttgcctgatgacc----actggcctgagaactgttgtttca-tg------tatttttt-ttttctggctttttggttatgtcaggtaagagagtaaatcc-ataccc i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1724776 286 - 2415367 ctgccctgcacaccacagataccttagtatctacaa------agttctgtcc-cc-c-aactcagat--t--tggcagacctctgcc--ttgctttcctct--ccctccctgccctac-cgcctgga----cac----tcc----aggcagcgaggcagggcagctgtag-gctcactttgtttgttttctgtctcacagggattattatcatt----------tgttgcctgatgatc----actggcctgaaaactgttgtttca-tggttttttttttttttttttctggccttttggttatgtcaggtaagagagtaaatcc-ataccc i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64066739 271 + 204313951 ctgccctgcacactgcagacaccttagtatctacaa------agttctgtct-ct-c-aactcaaat--t--tggcagacctctgcc--ttgcttccctct--ccctccctgccctac-agcctgga----ctc----tcc----agacagcaagacagggcagctgtag-gctcac-ttgtttgttttttgtctcacaggg---attttgttt----------ttttgcctgatgtcc----attggcctgaaaactgttgtttca-ta----------attttttttccggc-ttttggtcatgtcaggtgagagggtaaattc-acaccc i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2194893 276 + 10068113 ctgccctgcacactgcagacaccttagtatctacaa------agttctgtct-cc-c-aactcaaat--t--tggcagacttctgcc--ttgcctccctct--ccctccctgccctac-agcctgga----ctc----tcc----aggcagtgagacagggcagctgtag-gctcactttgtttgttttctgtctcacagggatcattatcttt----------tgttgcctgatgtcc----attggcctgaaaactgttgtttcattt----------tttttttttctagc-ttttggtcatgtcaggtgagagggtaattcc-acaccc i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 49916 275 - 709587 ctgccctgcacactgcagacaccttagtatctacaa------agttctgtct-cc-c-aactcaaat--t--tggcaggcctctgcc--ttgcctccctct--ccctccctgccctac-agcctgga----ctc----tcc----aggcagtgagacagggaagctgtag-gctcactttgtttgttttctgtctcacagggattattatcttt----------tgttgcctgatgtcc----attggcctgaaaactgttgtttca-ta----------tttttttttctggc-ttttggtcatgttaggtgagagggtaaatcc-ataccc i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1150830 275 - 2246441 ctgccctgcacactgcagacaccttagtatctacaa------agttctgtct-cc-c-agctcaagt--t--tgacagacctctgcc--ttgcttccctct--ccctccctgccctac-agcctgga----ctc----tcc----gggcggtgagacagggcagctttag-gctcactttgtttgttttctgtctcacagggattattatcttt----------tgtcgcctgatgtcc----attggcctgaaaactgttgtttca-tt----------tttttttttctggc-ttttggtcatgtcaggtgagagggtaaatcc-acaccc i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 755765 275 - 940639 ctgctctacacactgcaggcaccttagtgtctatga------agttctgtct-cctc-aactcaagttat--tcaccaacctctgcc--ttgctt----cc--tgctccctgccc-ac-agcctggattctctc----tcc----aggaagctaagtagggcagcagtggcactcgctcagtttgttttctgtctcacagggatcattatcttt----------tgacacctgacatcc----actagctggaaaatcactatttta-tt-----------tttttctattgg---tttggttgtatcaggagggagagaaaatcc-attccc i proCoq1.NW_012152163v1 I 29 C 0 s canFam3.chr4 37167679 276 + 88276631 ttgtggttcatcctatagacaccctggtaccccccagctctcagctttgtct-ca-tgaactcaccctgt--ctgccagcctgtgtc--tccctg----------ctccctgaaccacaagccagga----ctctccttcc----aggcagtgaggtatggtaactgtagggctcacttcattcattttctctctcacaggggtcattatccttggttgccttatgttgccttgtgtcc----actgtcttgaaaa---tggtttca-ta------tt--ctcactgttttg---ttgttgttgtgt------------taaatct-gttcc- i canFam3.chr4 I 1 C 0 s dasNov3.JH562710 243411 262 - 960158 ctgtcctgtgtactctgaacacctcagtctctctgaactctcagctctgtctgcc-c-aactcaaat--tgcttcccaacctctgccagtttcctcattgtgacactcatcgtgtcac-agcctgga----ttc----tcttttaaggtggtaaggtaaggtgattgtag-ga--------------------------------atcatcctt----------tgttgtctagtgttc----agtgtcttcaaaaccattgtttca-ta------ta--tttttttcttggg--ttttggttgtttcaggtgggagggtCATTTTGATGACT i dasNov3.JH562710 I 1 C 0 e mm10.chr13 65979384 6914 - 120421639 I e otoGar3.GL873522 1215724 8145 + 48283576 I a score=2787755.000000 s hg38.chr5_KI270795v1_alt 37883 218 + 131892 tgtgacaccatcttgctagaagtagaag----tG----TTACCTTTTTAATATAT-TA----TTTTTCCTTCAAAACCCACATTAGAAGGAACtt-----tgtaac-aacaaccg--------------------acagcttgacaaagtgtgttcccattgtcctgtgattgctctgcttttcaaagtaagcctgcgaggtgggtgtcatgtcatccccattttacagataaggggacagaacctcagagaggtga s panTro5.chr5 5286435 223 - 181907262 tgtgacaccatcttgttggaagtagaag----tG----TTACCTTTTTAATATAT-TA----TTTTTCCTTCAAAACCCACATTAGAAGGAACTTTCCTCTGTAAC-AACAACCG--------------------acagcttgacaaagtgtgttcccattgtcctgtgattgctctgcttttcaaagtaagcctgcgaggtgtgtgtcatgtcatccccattttacagataaggggacagaacctcagagaggtga i panTro5.chr5 C 0 C 0 s panPan2.chr5 5548809 223 - 183735486 tgtgacaccatcttgttggaagtagaag----tG----TTACCTTTTTAATATAT-TA----TTTTTCCTTCAAAACCCACATTAGAAGGAACTTTCCTCTGTAAC-AACAACCG--------------------acagcttgacaaagtgtgttcccattgtcctgtgattgctctgcttttcaaagtaagcctgcgaggtgtgtgtcatgtcatccccattttacagataaggggacagaacctcagagaggtga i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1680593 222 + 3967317 tgtgacaccatcttgctagaagtagaag----tg----ttacc-ttttaatatat-tA----TTTTTCCTTCAAAACCCACATTAGAAGGAACTTTCCTCTGTAAC-AACAACCG--------------------acagcttgacaaagtgtgttcccattgtcctgtgattgctctgcttttcaaagtaaacctgtgaggtgggtgtcatgtcatccccattttacagataaggggacagaacctcagagaggtga i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4505063 223 + 163208435 tgtgacaccatcttgctagaagtagaag----ta----ttacctttttaatatat-ta----tttTTCCTTCAAAACCCGCATTAAAAGGAACCTTCCTCTGTAAC-AACAACCG--------------------acagcttgacaaagtgtgttcccattgtcctgtgattgctctgcttttcaaagtaagcctgcgaggtggatgtcatgtcatccccattttacagataaggggacagaacctcagagaggtga i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5737688 223 - 180051392 tgtgaaaccatcttgctagaagtagaag----tG----TTGCCTTTTTAATATAT-TA----TTTTTCCTTCAAAATCCACATCAGAAGGAACCTTCCTCTGTAAC-AACAACCG--------------------acaacttgacaaagtgtgttcccattgtcctgtgattgctctgcttttcaaagtaagcctgcggggtgggtgtcatgtcatccccattttacagatgaggggacagaacctcagagaggtga i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5923497 223 - 181584905 tgtgaaaccatcttgctagaagtagaag----tG----TTGCCTTTTTAATATAT-TA----TTTTTCCTTCAAAATCCACATTAGAAGGAACCTTCCTCTGTAAC-AACAACCG--------------------acaacttgacaaagtgtgttcccattgtcctgtgattgctctgcttttcaaagtaagcctgcggggtgggtgtcatgtcatccccattttacagatgaggggacagaacctcagagaggtga i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 952552 223 - 16193990 tgtgaaaccatcttgctagaagtagaag----tG----TTGCCTTTTTAATATAT-TA----TTTTTCCTTCAAAATCCACATTAGAAGGAACCTTCCTCTGTAAC-AACCACCG--------------------acaacttgacaaagtgtgttcccattgtcctgtgattgctctgcttttcaaagtaagcctgcggggtgggtgtcatgtcatccccattttacagatgaggggacagaacctcagagaggtga i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1775530 223 - 21434487 tgtgaaaccatcttgctagaagtagaag----tG----TTGCCTTTTTAATATAA-TA----TTTTTCCTTCAAAATCCACATTAGAAGGAACCTTCCTCTGTAAC-AACAAACG--------------------acaacttgacaaagtgtgttcccattgtcctgtgattgctctgcttttcaaagtaagcctgcggggtgggtgtcatgtcatccccattttacagatgaggggacagaacctcagagaggtga i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4738841 223 - 82825804 tgtaaaaccatcttgctagcagtagaag----tG----TTGCCTTTTTAATATAT-TA----TTTTTCCTTCAAAACCCACATTAGAAGGAACCTTCCTTGGTAAC-AACAACCG--------------------acaacttgacaaagtgtgttcccattgtcctgtgattgctctgcttttcaaagcaagcctgcgggctgggtgtcatgtcatccccattttatagataaggggacagaacctcagagaggtga i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 233772 243 + 2521317 tgtgaaaccatcttgctagaagtagaag----tG----TTGCCTTTTTAATATAT-TA----TTTTTCCTTCAAAATCCTCATTAAAAGGAACCTTCCTCTGTAAC-AACAACCGACAAAGTTGTTGTAACAACAacaacttgacaaagtgtgttcccattgtcctgtgattgctctgcttttcaaagtaagcctgcggggtgggtgtcatgtcatccccattttacagatgaggggacagaacctcagagaggtga i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1725062 223 - 2415367 tgtgaaaccatcttgctagaagtagaag----tG----TTGCCTTTTTAATATAT-TA----TTTTTCCTTCAAAACCTACATTAGAAGGAACCTTCCTCTGTAAC-AACAACCG--------------------acaacttgacaaagtgtgttcccattgtcctgtgattgctctgcttttcaaagtaagcctgtggggtgggtgtcatgtcattcccattttacagataaggggacagaacctcaaagaggtga i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64067010 218 + 204313951 tgtcattcaagcttgc------tagaag----TG----TTGCCttttaaatatat-tatt--tttttcttttaaaGCCCACA-TGAAAGGAGCCTTCCTCTGTAAC-AACAACCA--------------------ACAGCTTGACAATGTATGTTCCCATTATCCTGTGAATGCtctacttttcaaagtaagcctgcgaggtgggtgtcatgtcatctccattttacagataaggagacagaacctcagagaggtga i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2195169 221 + 10068113 tgtcattccagcttgc------tagaag----TG----TTGCCTTTTTAATATAT-TATTTGTTTTTCTTTTAAAACCCACATTAAAAGGAGCCTTCCTCTGTAAC-AACAACCA--------------------acagcttgacaaagtgtgttcccattatcctgtgcatgctctacttttccaagtaagcctgcgaggtgggtgtcatgtcatccccattttacagataaggagacagaacctcagagaggtga i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 50191 217 - 709587 tgttattccagcttgc------tagaag----TG----TTGTCTTTTTAATATAT-TATT--TTTTTCTTTTAAAACCCACATTAAAAGGAACCTTCTTCTGTAAC-AACAACCA--------------------acagcttgacaaagtgtgttcccattatcctgtgaatgctctacttttcaaagtaagcctgcgaggtgggtgtcatgtcatccccattttacagataaggagac--aacctcagagaggtga i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1151105 219 - 2246441 tgtcattccaacttgc------tagaag----TG----TTGCCTTTTGAATATAT-TATT--TTTTTCTTTTAAAACCCACATTAAAAGGAGCCTTCCTCTGTAAG-AACAACCA--------------------acagcttgacaaagtgtgttcccattatcctgtgaatgctctacttttcaaagtaagcctgtgaggtgggtgtcatgtcatccccattttacagataaggagacagaacctcagagaggtga i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 756040 221 - 940639 tgttactctatcttgctagaaacagaagcatctc----ttacgtttttaatacat-ta----tttTTCTTTCGAAACCTACATTAGAAGGAATCTTCTG---TAAC-AACAACCA--------------------Gcagtttgacaaagcgtgtttccattgtcctgtgattgctttgcttctcaaaacaagtctgccaggtgggt---gttgtatccccattttacagataatagaacagagcctcagagaggtga i proCoq1.NW_012152163v1 C 0 C 0 s otoGar3.GL873522 1223869 199 + 48283576 tgtgagccattctcattggggttaggtg----TG----TTACCTTTTTAATACAT-TA----TTTTTCTTTCAAGACTCATATTAGAAGGAACCTTCCT------C-TGTAACCA--------------------ACAGCCTGACAAAGTGTGTTTCCAG--------------tttgcttctcaaagaaagcctggtaggtgtg----atgacattcccattttataggtaggagaacagagcttcaaagaggtga i otoGar3.GL873522 I 8145 I 282 s canFam3.chr4 37167955 220 + 88276631 -attattccaatttgctgcaatcagaag----tgttctttatcttttTATTCCAT-TA----TTTTGTTTTCAAAATCCACCTTAGAAGAAACCTTCCTCCGTGAG----AACCA--------------------acagtttgacaaagcgtgttcctattatgctgtgattgttttgcctctcaaatcaagcctg--aggcaggtgtcagatcatt-ccattttacagatgaaggcacctagctgcagagaggcaa i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 243673 183 - 960158 -----------TTTGA------TCAGTC----TC----TTCCTTGTTTATTACATATT----TTTCCCCTTCAAAATCCACATTGAAAGAAACCTTTCTCTGCAACAAAAAACTA--------------------AAAACTCGGCA--GTGTGTTCCTATCATCCTGTGATTGCTTTGCATT------------tgtgaggcgagtagcacattatcccctttgtacagatg-----------cctcagagaggtga i dasNov3.JH562710 C 0 C 0 e mm10.chr13 65979384 6914 - 120421639 I a score=1505238.000000 s hg38.chr5_KI270795v1_alt 38101 124 + 131892 agagactt--------gttcaaggtcacacggtctataacggcagagccaggattgaacccaagtcCCCA---------TTATA----------CTTGTAGTTCCCACAGGGGAGACAGAACCACATG----AAGGGTTGGCATCACTATATTTT----------- s panTro5.chr5 5286658 124 - 181907262 agagactt--------cttcaaggtcacacggtctataacggcagagccaggattgaacccatgtcCCCA---------TTATA----------CTTGTAGTTCCCACAGGGGAGACAGAACCACATG----AAGGGTTGGCATCACTATATTTT----------- i panTro5.chr5 C 0 C 0 s panPan2.chr5 5549032 123 - 183735486 agagactt--------cttcaaggtcacacggtctataacggcagagccaggattgaacccatgtcCCCA---------TTATA----------CTTGTAGTTCCCACAGGGGAGACAGAACCACATG----AAGGGTTGGCATCACTATA-TTT----------- i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1680815 124 + 3967317 agagactt--------gttcaaggtcacacggtctataacggcagagccaggattgaacccatgtcCCCA---------TTATA----------CTTGTAGTTCCCACAGGGGAGACAGAACCACATG----AAGGGTTGGCATCACTATATTTT----------- i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4505286 123 + 163208435 agagactt--------gttcaaggtcacatggtctataacggcagagccaggattgaacccatgtTCCCA---------TTATA----------CTTGTAGTTCCCACAGGGGAAACAGAACCACATG----AATGGTTGGCATTACTATA-TTT----------- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5737911 123 - 180051392 agagactt--------gtccaaggtcacacagcctataaaggcagagccaggattgaacccacgtcCCCA---------TTATA----------CTTGTAGTTCCCACAGGGGAGACAGAACCACATG----AAGGGTTGGCATTACTATA-TAT----------- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5923720 123 - 181584905 agagactt--------gtccaaggtcacacagcctataaaggcagagccaggattgaacccacgtcCCCA---------TTATA----------CTTGTAGTTCCCACAGGGGAGACAGAACCACATG----AAGGGTTGGCATTACTATA-TAT----------- i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 952775 123 - 16193990 agagactt--------gtccaaggtcacacagcctataaaggcagagccaggattgaacccacgtcCCCA---------TTATA----------CTTGTAGTTCCCACAGGGGAGACAGAACCACATG----AAGGGTTGGCATTACTATA-TAT----------- i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1775753 123 - 21434487 agagactt--------gtccaaggtcacacagcctataaaggcagagccaggattgaacccacgtcCCCA---------TTATA----------CTTGTAGTTCCCACAGGGGAGACAGAACCACATG----AAGGGTTGGCATTACTATA-TAT----------- i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4739064 123 - 82825804 agagactt--------gtccaaggtcacacagcctaaaaaggcggagccaggattgaacccacgtcCCCA---------TTATA----------CTTGTAGTTCCCACAGGGGAAACAGAACCACATG----AAGGGTTGGCATTACTATA-TAT----------- i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 234015 123 + 2521317 agagactt--------gtccaaggtcacacagcctataaaggcagagccaggattgaacccacgtcCCCA---------TTATA----------CTTGTAGTTCCCACAGGGGAGACAGAACCACATG----AAGGGTTGGCACTACTATA-TAT----------- i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1725285 123 - 2415367 agagactt--------atccaaggtcacacagcctataaaggcagagccaggattgaacccacatcCCCA---------TTATA----------CTTGTAGTTCCCACAGGGGAAACAGAACCACATG----AAGGGTTGGCATTACTATA-TAT----------- i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64067228 123 + 204313951 agggactt--------gtccaagatctcacagtctataaaggcaaagccaggattaaacccatgtcCCCA---------TTATA----------CTTGTTGTTCCCAGAGGAGAAACAGAACCACATG----AAGGGCTGGTATCATTATA-TTT----------- i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2195390 123 + 10068113 agggactt--------gtccaagatcacacagtctataaaggcaaagccacaagtaaacctatgtcCCCA---------TTATA----------ATTTTTATTCCCAGAGGAGAAACAGAACCACATG----AAGGGCTGGTATCATTATA-TTT----------- i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 50408 123 - 709587 agagactt--------gtccaagatcacgcagtctataaaggcaaagccaggattaaacccatgtccacA---------TTATA----------CTTGTTGTTCCCAGAGGAGAAGCAGAATCACATG----AAGGGCTGGTATCATTATA-TTT----------- i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1151324 123 - 2246441 agggactt--------gtccaagatcacacagtctataaaggcaaagccaggattaaacccatgtcCCCA---------TTATA----------CTTGTTGTTCCCAGAGGAGAAACGGAACCACATG----AAGGGCTGGTATCATTATA-TTT----------- i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 756261 121 - 940639 agggactt--------atccaaggtcacccagtcttaaaagtcagagccaggattgaatgtatgtcccca---------tgacA----------CTTGTAGTGCCCGGAGAGGAAAT--AGCCACATG----AAAGGTTGGCATTATTATG-TTT----------- i proCoq1.NW_012152163v1 C 0 I 154 s otoGar3.GL873522 1224350 122 + 48283576 agtgattt--------gtccaaggttgcccagtcttaaaacacagaaccaggcctgaacctatgt-cCAA---------TGATA----------CTCGTAATGCCCAGAGAAGAAACAGAGCCATATG----AAGAGTTGGTATTATTATG-TTT----------- i otoGar3.GL873522 I 282 I 1 s canFam3.chr4 37168175 124 + 88276631 aaggactt--------gtccaacatcacacaatctagaagg---------ggattaagtct-catcctcactcactgtgctgcc----------ctcATAGTT-CCGGAGGGGAAACAGAGTCACATGAAGTAAGGGTTGGTATTAC-ATT-TTT----------- i canFam3.chr4 C 0 I 9 s dasNov3.JH562710 243856 145 - 960158 agtgattgacagttgaacacaaggtcacatagttttaagaggcagaaccagaactgaacccacatccctg---------ctacactctactgcccttGTATTTCACAGAGGCACA-------CAAAGG----AAGGGTTGGTATTATTACA-TTTTTAAAAGTATT i dasNov3.JH562710 C 0 C 0 e mm10.chr13 65979384 6914 - 120421639 I a score=127747.000000 s hg38.chr5_KI270795v1_alt 38225 12 + 131892 TTTTTGGGAGAG s panTro5.chr5 5286782 12 - 181907262 TTTTTGGGAGAG i panTro5.chr5 C 0 C 0 s panPan2.chr5 5549155 12 - 183735486 TTTTTGGGAGAG i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1680939 12 + 3967317 TTTTTGGGAGAG i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4505409 12 + 163208435 TTTTTGGGAGAG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5738034 12 - 180051392 TTTTTGGGAGAG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5923843 12 - 181584905 TTTTTGGGAGAG i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 952898 12 - 16193990 TTTTTGGGAGAG i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1775876 12 - 21434487 TTTTTGGGAGAG i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4739187 12 - 82825804 TTTTTGGGAGAG i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 234138 12 + 2521317 TTTTTGGGAGAG i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1725408 12 - 2415367 ATTTTGGGAGAG i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64067351 12 + 204313951 TTGTGGGGAGAG i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2195513 12 + 10068113 TTGTGGGGAGTG i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 50531 12 - 709587 TTGTGGGGAGAG i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1151447 12 - 2246441 TTGTGGGGAGAG i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1224473 8 + 48283576 ----TAAAAGTA i otoGar3.GL873522 I 1 C 0 s canFam3.chr4 37168308 12 + 88276631 TGTTGGGGGAAG i canFam3.chr4 I 9 C 0 s dasNov3.JH562710 244001 12 - 960158 TCTTTGGGAGGG i dasNov3.JH562710 C 0 I 675 e mm10.chr13 65979384 6914 - 120421639 I e proCoq1.NW_012152163v1 756382 154 - 940639 I a score=102468.000000 s hg38.chr5_KI270795v1_alt 38237 13 + 131892 GTCAATAAAG--GTG s panTro5.chr5 5286794 13 - 181907262 GTCAATAAAG--GTG i panTro5.chr5 C 0 C 0 s panPan2.chr5 5549167 13 - 183735486 GTCAATAAAG--GTG i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1680951 13 + 3967317 GTCAATAAAG--GTG i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4505421 13 + 163208435 GTCAATAAAG--GTG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5738046 13 - 180051392 GCCAATACAT--GTG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5923855 13 - 181584905 GCCAATACAT--GTG i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 952910 13 - 16193990 GCCAATACAT--GTG i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1775888 13 - 21434487 GCCAATAAAT--GTG i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4739199 13 - 82825804 GCCAATAAAG--GTG i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 234150 13 + 2521317 GCCAATAAAT--GTG i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1725420 13 - 2415367 GCCAATAAAG--GTG i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64067363 13 + 204313951 ATCAATAAAT--GTG i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2195525 13 + 10068113 ATCGATAAAT--GTG i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 50543 13 - 709587 ATCAATAAAT--GTG i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1151459 13 - 2246441 ATCAATAAAT--GTG i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1224481 7 + 48283576 GTT------T--TTG i otoGar3.GL873522 C 0 C 0 s canFam3.chr4 37168320 15 + 88276631 GGTGATAAATAGATG i canFam3.chr4 C 0 C 0 e mm10.chr13 65979384 6914 - 120421639 I e proCoq1.NW_012152163v1 756382 154 - 940639 I e dasNov3.JH562710 244013 675 - 960158 I a score=1090524.000000 s hg38.chr5_KI270795v1_alt 38250 111 + 131892 GGCTC-AGAGAG-TAATATATCAAGGCCTACGGGGCTAATGAGCCC-AGGAGTTTGTGGAGA-GTCAGAGATCTCCATGAGTTGTTTTCCTAATG--CCCCTTCCCACACCCAACCC- s panTro5.chr5 5286807 112 - 181907262 GGCTC-AGAGAG-TAATATATCAAGGCCTACGGGGCTAATGAGCCC-AGGAGTTTGTGGAGA-GTCAGAGATCTCCATGAGCTGTTTTCCTAATGC-CCCCTTCCCACACCCAACCC- i panTro5.chr5 C 0 C 0 s panPan2.chr5 5549180 112 - 183735486 GGCTC-AGAGAG-TAATATATCAAGGCCTACGGGGCTAATGAGCCC-AGGAGTTTGTGGAGA-GTCAGAGATCTCCATGAGCTGTTTTCCTAATGC-CCCCTTCCCACACCCAACCC- i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1680964 111 + 3967317 GGCTC-AGAGAG-TAATATATCAAGGCCTAC-AGGCTAATGAGCCC-AGGAGTTTGTGGAGA-GTCAGAGATCTCCATGAGTTGTTTTCCTAATGC-CCCCTTCCCACACCCAACCC- i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4505434 113 + 163208435 GGCTCAAGAGAG-TAATATATCAAGGCCTACAGGGCTAATGAGCCC-AGGAGTTTGTGGAGA-GTCAGAGATCTCCGTGAGTTGTTTTCCTAATGC-CCCCTTCCCACACCCAACCC- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5738059 113 - 180051392 GGCTC-AGAGAG-TAATATTTCAAGGCCTACAGGGCTAATGAGCCCTCGGAGTTTGTGGAGA-GTCAGAGATCTCCAGGAGTTGTTTTCCTAATGC-GCTGCCGCCATACCCAACCC- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5923868 113 - 181584905 GGCTC-AGAGAG-TAATATTTCAAGGCCTACAGGGCTAATGAGCCCTCGGAGTTTGTGGAGA-GTCAGAGATCTCCAGGAGTTGTTTTCCTAATGC-GCTGCCGCCATACCCAACCC- i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 952923 113 - 16193990 GGCTC-AGAGAG-TAATATTTCAAGGCCTACAGGGCTAATGAGCCCTAGGAGTTTGTGGAGA-GTCAGAGATCTCCAGGAGTTGTTTTCCTAATGC-GCTGCCGCCATACCCAACCC- i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1775901 113 - 21434487 GGCTC-AGAGAG-TAATATTTCAAGGCCTACAGGGCTAATGAGCCCTATGAGTTTGTGGAGA-GTCAGAGATCTCCAGGAGTTGTTTTCCTAATGC-GCTGCCCCCATACCGAACCC- i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4739212 113 - 82825804 GGCTC-AGAGAG-TAATATTTCAAGGCCTACAGGGCTAATGAGCCCTAGGAGTTTGTGGAGA-GTCAGAGATCTCCATGAGTTGTTTTCCTAATGC-CCTGCCCCCATACCCAACCC- i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 234163 113 + 2521317 GGCTC-AGAGAG-TAATATTTCAAGGCCTACAGGGCTAATGAGCCCTAGGAGTTTGTGGAGA-GTCAGAGATCTCCATGAGTTGTTTTCCTAATGC-GCTGCCCCCATACCCAACCC- i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1725433 113 - 2415367 GGCTC-AGAGAG-TAATATTTCAAGGCCTACAGGGCTAATGAGCCCTAGGAGTTTGTGGAGA-GTCAGAGATCTCCATGAGTTGTTTTCCTAATGC-CCTGCCTCCATACCCAACCC- i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64067376 105 + 204313951 GGTTC-AGAGAGTTAATATTTCAAGGCCTACAGGGCTAATGAGCCT-AGGAGTTTGTGGAGA-GTCAGAGATCTCCATGGGTTGTGTTTCTAGT------TCCCCCA---CCAACTT- i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2195538 104 + 10068113 GGCTC-AGAGAG-TAATATTTCAAGGCCTACAGGGCTAATGAGCCT-AGGAGTTTGTGGAGA-GTCAGAGATCTCCATGGGTTGTGTTTCTAGT------TCCCCCA---CCAACTT- i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 50556 104 - 709587 GTCTC-AGAGAG-TAATATTTCAAGGCCTAGAGGGCTAATGAGCTT-AGGAGTTTGTGGAGA-GTCAGAGATCTCCATGGGTTGTCTTTCTAGT------TTCCCCA---CCAACTT- i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1151472 104 - 2246441 AGCTC-AGAGAG-TAATATTTCAAGGCCTACGGGGCTAATGAGCCT-AGGAGTTTGTGGAGA-GTCAGAGATCTCCATGGGTTGTGTTTCTAGT------TCTCCCA---CCAACTT- i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1224488 113 + 48283576 GGCTC-AGAGAG-TAATATTTCTGAGGTCACA-GGCTAATGAGCCT-GGGAGTTTGGGGATAGGTCAGGTGTCTCTGTGAGTGGACTTCCTGCTGCAGTCCTCCCCTCGCCCAACCC- i otoGar3.GL873522 C 0 I 1 s canFam3.chr4 37168335 110 + 88276631 GGCTC-ACAGAG-TAACATTTCCAAGGTCACAGGGCTAATGAGCCT--AGAGTTTGTAGAGG-GTTAGGGATCTCAATGAGTGGTCTTCCAACTAC-ACCTTCCCTCAACCTACTT-- i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 244688 91 - 960158 GGCTC-AG-GAG-TAATATCCCAG----TACAGAGT--ATGAG----AGGGGAGTGAGAGGA-TTTGGG-----TCGTGTGTGGTCTT-CTACCGC-------ACCCTACCCCACTCA i dasNov3.JH562710 I 675 C 0 e mm10.chr13 65979384 6914 - 120421639 I e proCoq1.NW_012152163v1 756382 154 - 940639 I a score=8316663.000000 s hg38.chr5_KI270795v1_alt 38361 619 + 131892 CTTC---AGATAAAGGAGTGTGCCTTCTACCTCATGCATCCATCCAGACAGGAGAATT---------GGG-C-TTTTTGCCAGGGCTG-TAGACCTGG-AGGTCTGGAACTTGGCCTGGCTTTGTGGGCTTTCATG----GAAAGTGGAGAAGAGGGATTAGGGAAGAGGTAATGGATAAGAAGTACTGGTTGCTCAG--GTTGGGGTGGTCAGGGAGGTGAGGGGAGGGAGAAGGGAGTACC------AGAAGGCCAGTGGGTAGGCTTGCAGGAGCTGTGGGTGGA-TGGCGTGGCCCC----------AGGGGACAGGAGC-TAGGTCCAGCCGGCTCCCACTGTCTTCTGGCTTGTAGGATTATCTCTGCTCCTCCCCCTTTCTCTGAGTGAGAAAGGTGGG-AAATAAAATAATGAAGCCGTGAGTAGGTGAGGTGTTAGGGAGA----CAGCTTGCC-----AGGGTGGGCAGCACAGATGACTGGTGGGTGGGGAGGGAGGTGGTGGGAGGTTAATGTGCAGATCCTCAGATCTCCGAGA-----------AACAGGGTGGAAGGGAGTCAGTCCGG-TGTGCAGAGTTGCAGGTGGGGGCAATAGTGGGTGA-----------------TAC-CCAAGGCACAGGTGGTTTCCTGGGAAGAAGGTGATGTGGTCTTTTCTTGGCTATGGAG s panTro5.chr5 5286919 619 - 181907262 CTTC---AGATAAAGGAGTGTGCCTTCTACCTCATGCATCCATCCAGACAGGAGAATT---------GGG-C-TTTTTGCCAGAGCTG-TAGACCTGG-AGGTCTGGAACTTGGCCTGGCTTTGTGGGCTTTCATG----GAAAGTGGAGAAGAGGGATTAGGGAAGAGGTAATGGATAAGAAGTACTGGTTGCTCAG--GTTGGGGTGGTCAGGGAGGTGAGGGGAGGGAGAAGGGAGTACC------AGAAGGCCAGTGGGTAGGCTTGCAGGAGCTGTGGGTGGA-TGGCGTGGCCCC----------AGGGGACAGGAGC-TAGGTCCAGCCGGCTCCCACTGTCTTCTGGCTTGTAGGATTATCTCTGCTCCTCCCCCTTTCTCTGAGTGAGAAAGGTGGG-AAATAAAATAATGAAGCCGTGAGTAGGTGAGGTGTTAGGGAGA----CAGCTTGCC-----AGGGTGGGCAGCACAGATGACTGGTGGGTGGGGAGGGAGGTGGTGGGAGGTTAATGTGCAGATCCTCAGATCTCCGAAA-----------AACAGGGTGGAAGGGAGTCAGTCTGG-TGTGCAGAGTTGCAGGTGGGGACAATAGTGGGTGA-----------------TAC-CCAAGGCACAGGTGGTTTCCTCGGAAGAAGGTGATGTGGTCTTTTCTTGGCTATGGAG i panTro5.chr5 C 0 C 0 s panPan2.chr5 5549292 619 - 183735486 CTTC---AGATAAAGGAGTGTGCCTTCTACCTCATGCATCCATCCAGACAGGAGAATT---------GGG-C-TTTTTGCCAGAGCTG-TAGACCTGG-AGGTCTGGAACTTGGCCTGGCTTTGTGGGCTTTCATG----GAAAGTGGAGAAGAGGGATTAGGGAAGAGGTAATGGATAAGAAGTACTGGTTGCTCAG--GTTGGGGTGGTCAGGGAGGTGAGGGGAGGGAGAAGGGAGTACC------AGAAGGCCAGTGGGTAGGCTTGCAGGAGCTGTGGGTGGA-TGGCGTGGCCCC----------AGGGGACAGGAGC-TAGGTCCAGCCGGCTCCCACTGTCTTCTGGCTTGTAGGATTATCTCTGCTCCTCCCCCTTTCTCTGAGTGAGAAAGGTGGG-AAATAAAATAATGAAGCCGTGAGTAGGTGAGGTGTTAGGGAGA----CAGCTTGCC-----AGGGTGGGCAGCACAGATGACTGGTGGGTGGGGAGGGAGGTGGTGGGAGGTTAATGTGCAGATCCTCAGATCTCCGAGA-----------AACAGGGTGGAAGGGAGTCAGTCTGG-TGTGCAGAGTTGCAGGTGGGGACAATAGTGGGTGA-----------------TAC-CCAAGGCACAGGTGGTTTCCTCGGAAGAAGGTGATGTGGTCTTTTCTTGGCTATGGAG i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1681075 618 + 3967317 CTTC---AGATAAAGGAGTGTGCCTTCTACCTCATGCATCCATCCAGACAGGAGAATT---------GGG-C-TTTTTGCCAGAGCTG-TAGACCTGG-AGGTCTGGAACTTGGCCTGGCTTTGTGGGCTTTCACG----GAAAGTGGGGAAGAGGGATTAGGGAAGAGGTAATGGATAAGAAGTACTGGTTGCTCAG--GTTGGGGT-GTCAGGGAGGTGAGGGGAGGGAGAAGGGAGTACC------AGAAGGCCAGTGGGTAGGCTTGCAGGAGCTGTGGGTGGA-TGGCGTGGCCCC----------AGGGGACAGGAGC-TAGGTCCAGCCGGCTCCCACTGTCTTCTGGCTTGTAGGATTATCTCTGCTCCTCCCCCTTTCTCTGAGTGAGAAAGGTGGG-AAATAAAATAATGAAGCCGTGAGTAGGTGAGGTGTTAGGGAGA----CAGCTTGCC-----AGGGTGGGCAGCACAGATGACTGGTGGGTGGAGAGGGAGGTGGTGGGAGGTGAATGTGCAGATCCTCAGATCTCCGAGA-----------AACAGCGTGGAAGGGAGTCAGTCTGG-TGTGCAGAGTTGCAGGTGGGGGCAATAGTGGGTGA-----------------TAC-CCAAGGCACAGGTGGTTTCCTGGGAAGAAGGTGATGTGGTCTTTTCTTGGCTATGGAG i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4505547 618 + 163208435 CTTC---AGATAAAGGAGTGTGCCTTCTACCTCATGCATGCATCCAGACAGGAGAATT---------GGG-C-TTTTTGCCAGAGCTG-TAGACCCGG-GGGTCTGGAACTTGGCCTGGCTTTATAGGCTTTCATG----GAAAGTGGAGAAGAGGGATTAGGGAAGAGGTAATGGATAAGGAGTAATGGTTGCTCAA--GTTGGGGTGGTCAGGGAGGTGAGGGGAGGGAGAAGGGAGTACC------AGAAGGCCAATGGGTAGGCTTGCAGGAGCTGTGGCTAGA-TGGCATGGCCCC----------AGGAGACAGGAGC-TAGGTCCAGCCGGCTCCCACTGTCTTCTGGCTTGTAGGATTATCTCTGCTCCTCCCCCTTTCTCTGAGTGAGAAAGGTGGG-AAATAAAATAATGAAGCTGTGAGTAGGTGAGGTGTTAGGGAGA----CAGCTTGCC-----AGGGTGGGCAGCACAGATGACTGGTGGGTGGGGAGGGAGGTGGTGGGAGGTTAATGTGCAGATCCTCAGATCTCTGAGA-----------AACAGGGTGGAAGGGAGTCAGTCTGG-TGTGCAGAGTTGCAGGTGGGGGCAATAGTGGGTGA-----------------TAC-CCAAGGCACAGGT-GTTTCCTGGGAAGAAGGTGATGTGGTCTTTTCTTGGCTATGGAG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5738172 608 - 180051392 CTTC---AGATAAAGGAGTGTGCCTTCTACCTCATGCATCCTTCTAGACAGGAGAGCT---------GGG-C-TTTTTGCCAGAGCTG-TAGACCTGG-GAGTCTGGAACTTGGTTTGGCTTTATGGGCATTCATG----AAAAGTGGAGAAGAGGGATTAGCGAAGAGGTAATGGATAAGGAGTACTGGTTGCTCAA--GTTg---------gggaggtgaggggagggagaagggagTACC------AGAAAGCCAGTGGGTAGGCTTGCAGGAGCTGTGGGTGGA-TGGCGTGGCCCC----------GGGGGACAGGAGC-TAGGTCCAGCCGGTTCCCACTATCTTCTGGCTTGTAGGATTATCTCTGCTCCTCCCCCTTTCTCTCAGTGAGAAAGGTGGG-AAATAAAATAATGAAGC-GTGAGTAGGTGAGGTGTGAGGGAGA----CAGCTTGCC-----AGGGTGGGCAGCACAGATGACTGGTGGGTGGGGAGGGAGGTGGTGGGAGGTTAATGTGCAGATCCTCAGATCTCCGAGA-----------AACAGGGTGGAGGGGAGTCAGTCTGG-TGTGCAGAGTTGCAGGTGGGGGCACTGGTGGGTGA-----------------TAC-CCGAGGCACAGGT-GTTTCCTGGGAAGAAGGGGATGTGGTCTTTTCTTGGCTATGGAG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5923981 608 - 181584905 CTTC---AGATAAAGGAGTGTGCCTTCTACCTCATGCATCCTTCCAGACAGGAGAGCT---------GGG-C-TTTTTGCCAGAGCTG-TAGACCTGG-GAGTCTGGAACTTGGTTTGGCTTTATGGGCATTCATG----AAAAGTGGAGAAGAGGGATTAGCGAAGAGGTAATGGATAAGGAGTACTGGTTGCTCAA--GTTg---------gggaggtgaggggagggagaagggagTACC------AGAAAGCCAGTGGGTAGGCTTGCAGGAGCTGTGGGTGGA-TGGCGTGGCCCC----------GGGGGACAGGAGC-TAGGTCCAGCCGGTTCCCACTATCTTCTGGCTTGTAGGATTATCTCTGCTCCTCCCCCTTTCTCTCAGTGAGAAAGGTGGG-AAATAAAATAATGAAGC-GTGAGTAGGTGAGGTGTGAGGGAGA----CAGCTTGCC-----AGGGTGGGCAGCACAGATGACTGGTGGGTGGGGAGGGAGGTGGTGGGAGGTTAATGTGCAGATCCTCAGATCTCCGAGA-----------AACAGGGTGGAGGGGAGTCAGTCTGG-TGTGCAGAGTTGCAGGTGGGGGCACTGGTGGGTGA-----------------TAC-CCGAGGCACAGGT-GTTTCCTGGGAAGAAGGGGATGTGGTCTTTTCTTGGCTATGGAG i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 953036 617 - 16193990 CTTC---AGATAAAGGAGTGTGCCTTCTACCTCATGCATCCTTCTAGACAGGAGAGCT---------GGG-C-TTTTTGCCAGAGCTG-TAGACCTGG-GGGTCTGGAACTTGGTTTGGCTTTATGGGCATTCATG----AAAAGTGGAGAAGAGGGATTAGCGAAGAGGTAATGGATAAGGAGTACTGGTTGCTCAA--GTTGgggaggtcagggaggtgaggggagggagaagggagTACC------AGAAAGCCAGTGGGTAGGCTTGCAGGAGCTGTGGGTGGA-TGGCGTGGCCCC----------GGGGGACAGGAGC-TAGGTCCAGCCGGTTCCCACTATCTTCTGGCTTGTAGGATTATCTCTGCTCCTCCCCCTTTCTCTCAGTGAGAAAGGTGGG-AAATAAAATAATGAAGC-GTGAGTAGGTGAGGTGTGAGGGAGA----CAGCTTGCC-----AGGGTGGGCAGCACAGATGACTGGTGGGTGGGGAGGGAGGTGGTGGGAGGTTAATGTGCAGATCCTCAGATCTCCGAGA-----------AACAGGGTGGAGGGGAGTCAGTCTGG-TGTGCAGAGTTGCAGGTGGGGGCACTGGTGGGTGA-----------------TAC-CCGAGGCACAGGT-GTTTCCTGGGAAGAACGGGATGTGGTCTTTTCTTGGCTATGGAG i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1776014 617 - 21434487 CTTC---AGATAAAGGAGTGTGCCTTCTACCTCATGCATCCTTCTAGACAGGAGAGCT---------GGG-C-TTTTTGCCAGAGCTG-TAGACCTGG-GGGTCTGGAACTTGGTTTGGCTTTATGGGCATTCATG----AAAAGTGGAGAAGAGGGATTAGCAAAGAGGTAATGGATAAGGAGTACTGGTTGCTCAA--GTTGgggaggtcagggaggtgaggggagggagaagggagTACC------AGAAAGCCAGTGGGTAGGCTTGCAGGAGCTGTGGGTGGA-TGGCGTGGCCCC----------GGGGGACAGGAGC-TAGGTCCAGCCGGTTCCCACTATCTTCTGGCTTGTAGGATTATCTCTGCTCCTCCCCCTTTCTCTGAGTGAGAAAGGTGGG-AAATAAAATAATGAAGC-GTGAGTAGGTGAGGTGTTAGGGAGA----CAGCTTGCC-----AGGGTGGGCAGCACAGATGACTGGTGGGTGGGGAGGGAGGTGGTGGGAGGTTAATGTGCAGATCCTCATATCTCCGAGA-----------AACAGGGTGGAGGGGAGTCAGTCTGG-TGTGCAGAGTTGCAGGTGGGGGCACTGGTGGGTGA-----------------TAC-CCGAGGCACAGGT-GTTTCCTGGGAAGAAGGTGATGTGGTCTTTTCTTGGCTATGGAG i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4739325 617 - 82825804 CTTC---AGATAAAGGAGTGTGCCTTCTATCTCATGCTTCCTTCTAGACAGGAGAGCT---------GGG-C-TTTTTGCCAGAGCTG-TAGACCTGG-GGGTCTGGAACTTGGTTTGGCTTTATGGGCATTCATG----AAAAGTGGAGAAGAGGGATTTGGGAAGAGGTAATGGATAAGGGGTACTGGTTGCTCAA--GTTGgggaggtcagggaggtgaggggagggagaagggagTACC------AGAAAGCCAGTGGGTAGGCTTGCAGGAGCTGTGGGTGGA-TGGCGTGGCCCC----------AGGGGACAGGAGC-TAGGTCCAGCCAGTTCCCACTATCTTCTGGCTTGTAGGATTATCTCTGCTTCTCCCCCTTTCTCTGAGTGAGAAAGGTGGG-AAATAAAATAATGAAGC-GTGAGTAGGTGAGGTGTGAGGGAGA----CAGCTTGCC-----AGGGTGGGCAGCACAGATGACTGGTGGGTGGGGAGGGAGGTGGTGGGAGGTTAATGTGCAGATCCTCAGATCTCCGAGA-----------AACAGGGTGGAGGGGAGTCAGTCTGG-TGTGCAGAGTTGCAGGTGGGGGCACTAGTGGGTGA-----------------TAC-CCGAGGCACAGGT-GTTTCCTGGGAAGAAGGTGATGTGGTCTTTTCTTGGCTATGGAG i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 234276 617 + 2521317 CTTC---AGATAAAGGAGTGTGCCTTCTACCTCATGCATCCTTCTAGACAGGAGAGCT---------GGG-C-TTTTTGCCAGAGCTG-TAGACCTGG-GGGTCTGGAACTTGGTTTGGCTTTATGGGCATTCATG----AAAAGTGGAGAAGAGGGATTAGCGAAGAGGTAATGGATAAGGAGTACTGGTTGCTCAA--GTTGgggaggtcagggaggtgaggggagggagaagggagTACC------AGAAAGCCAGTGGGTAGGCTTGCAGGAGCTGTGGGTGGA-TGGCGTGGCCCC----------GGGGGACAGGAGC-TAGGTCCAGCCGGTTCCCACTATCTTCTGGCTTGTAGGATTATCTCTGCTCCTCCCCCTTTCTCTGAGTGAGAAAGGTGGG-AAATAAAATAATGAAGC-GTGAGTAGGTGAGGTGTTAGGGAGA----CAGCTTGCC-----AGGGTGGGCAGCACAGATGACTGGTGGGTGGGGAGGGAGGTGGTGGGAGGTTAATGTGCAGATCCTCAGATCTCCGAGA-----------AACAGGGTGGAGGGGAGTCAGTCTGG-TGTGCAGAGTTGCAGGTGGGGGCACTGGTGGGTGA-----------------TAC-CCGAGGCACAGGT-GTTTCCTGGGAAGAAGGTGATGTGGTCTTTTCTTGGCTATGGAG i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1725546 624 - 2415367 CTTC---AGATAAAGGAGGGTGCCTTCTACCTCATGCATCCTTCTAGTCAGGAGAGTT---------GGG-C-TTTTTGCCAGAGCTG-TAGACCTGG-GGGTCTGGATCTTGGTTTGGCTTTATGGGCATTCATG----AAAAGTGGAGAAGAGGGATTAGGGAAGAGGTAATGGATAAGGAGTACTGGTTGCTCAA--GTTGgggaggtcagggaggtgaggggagggagaagggagtacagaagggagaaAGCCAGTGGGTAGGCTTGCAGGAGCTGTGGGTGGA-TGGCGTGGCCCC----------AGGGGACAGGAGC-TAGGTCCAGCCGGTTCCCACTATCTTCTGGCTTGTAGGATTATCTCTGCTCCTCCCCCTTTCTCTGAGTGAGAAAGGTGGG-AAATAAAATAATGAAGCTGTGAGTAGGTGAGGTGTTAGGGAGA----CAGCTTGCC-----AGGGTGGGCAGCACAGATGACTGGTGGGTGGGGAGGGAGGTGGTGGGAGGTTAATGTGCAGATCCTCAGATCTCCGAGA-----------AACAGGGTGGTGGGGAGTCAGTCTGG-TGTGCACAGTTGCAGGTGGGGGCACTAGCGGGTGA-----------------TAC-CCGAGGCACAGGT-GTTTCCTGGGAAGAAGATGATGGGGTTTTTTCTTGGCTATGGAG i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64067481 617 + 204313951 CTTC---AGATAAGGGAGTGTACCTTTTACCTCATGTATCCTTCTAGATAGGAGAATT---------GGG-C-TTTTTGCCAGAGCTG-TAGATATGG-GGGTCTGGAACTTGGACTGGATTTACGAGCATTCATG----GAAAGTGGAGAGGAGGGATTAGGGAAGAGGTAAGGGGTAAGGACTACTAGCTGCTCAA--GTTGGGATGGTCAGGGAGGCAAGGGAAGGGAGGAGGGCGTACC------AGAA-GCCAATGAGTAGGCTTGCAGGAGCTATGGGTGGA-TGACGTGGCCTC----------GCGGGACAGGAGC-TAGGTCCAGCTGTCTCCCATTGTCTCCTGGCATGTAGAATTATCCCTGCTCCT-CCCCTTTCTCTGAGTGAGAAAGGTGGG-AAATAAAATAATGAAGCTGTGAGTAGGTGAGGTGTTAGGGAGA----CAGCTTGCC-----AGGGTGGGCAGCACAGATGACTGGCGGGTGGGGAGGGAGGTGGTGGGAGGTTAATGTGCAGATCCTCAGATCTCTGAGA-----------AGCAAGGTGGAGGGGACGCAGTCTGG-TGTGCAGAGTTGCAGGTGGGGGCACTGGTGGGTGC-----------------TACACTGAGGCACAGGT-GTTTCCTGGGAAGAAGGTGATGTGGTCTTTTTTTGGCTATGGAG i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2195642 618 + 10068113 CTTT---AGATAAGGGAGTGTGCCTTTTACCTCGTGTGTCCTTCCAGACAGGAGAATC---------GGG-C-TTTTTGCCAGAGCTG-TAGACCTAG-GGGTCTGGAACTTGGCCTGGATTTACAAGCATTCATG----GAAAGTGGAGAGGAGGGATTAGGGAAGAGGTAAGGGGTAAGGAGTGCTAGTTTCTCAA--GTTGGGATGGTCAGGGAGGTAAGGGAAGGGAGGAGGGAGTACC------AGAAGGCCAGTGGGAAGGCTTGCAGGAGCTGTGGGTGGA-TGGCGTGGCCTT----------GCGGGACAGGAGC-TAGGTCCAGCTGGCTCCCATTGTCTCCTGGTATGTAGAATTATCCCTGCTCCT-CCCCTTTCTCTGAGTGAGAAAGGTGGG-AAATAAAATAATGAAGCCGTGAGTAGGTGAGGTGTTAGGGAGA----CAGCTTGCC-----AGGGTGGGCAGCACAGATGACTGGCGGGTGGGGAGGGAGGTGGTGGGAGGTTAATGTGCAGATCCTCAGATCTCCGAGA-----------AACAAGGTGGAGGGGACTCGGTCTGG-TGTGCAGAGTTGCAGGTGGGGGCACTGGTGGGTGC-----------------CACACCAAGGCACAGGT-GTTTCCTGGGAAGAAGGTGATGTGGTCTTTTTTTGGCTGTACAG i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 50660 615 - 709587 C------AGATAGGGGAGTGTGCCTTTTACCTCATGTATCATTCCAGACAGGAGAATT---------GGG-C-TTTTTGCCAGAGCTG-TAGACCTGG-GGGTCTGGAACTTGGCCTGGATTTACAAGCATTCATG----GAAAGTGGAGAGGAGGGATTAGGGAAGAGGTAAGGGGTAAGGAGTACTAATTGCTCAA--GTTgggatggtcagggaggtaagggaagggaggaaggAGTACC------AGAAGGCCAGTGGGTAGGCTTGCAGGAGCTGTGGGTGGA-TGGCGTGGCCTC----------GCGGGACAGGAGC-TAGGTCCAGCTGGCTCCCATTGTCTCCTGGTATGTAGAATTATCCCTGCTCCT-CCCCTTTCTCTGAGTGAGAAAGGTGGG-AAATAAAATAATGAAGCCGTGAGTAGGTGAGGTGTTAGGGAGA----CAGCTTGCC-----AGGGTGGGCAGCACAGATGACTGGCGGGTGGGGAGGGAGGTGGTGGGAGGTTAATGTGCAGATCCTCAGATCTCTGAGA-----------AACAAGGTGGAGGGGACTCAGTCTGG-TGTGCAGAGTTGCAGGTAGGGGCACTGGTAGGTGC-----------------TACACCGAGGCACAGGT-GTTTCCTGGGAAGAAGGTGATATGGTCTTTTTTTGGCTATAGAG i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1151576 615 - 2246441 CTTC---AGATAAGGGAGTGTGCCTTTTACCTCATGTATCCTTCCAGATAGGAGAATT---------GGG-C-TTTTTGCCAGAGCTG-TAGACCTGG-GGGTCTGGAACTTGGCCTGGATTTACAAGCATTCATG----GAAAGTGGAGAGGAGGGATTAGGGAAGAGGTAAGGGGTAAGAAGTACTAGTTGCTCAA--GTTGGGATGGTCAGGGAGGCAAGGGAAGGGAGGAGGGAGTACC------AGAAGGCCAATGGGTAGGCTTGCAGGAGCTATGGGTGGA-TGGCGTGGCCTT----------GCGGGACAGGAGC-TAGGTCCAGCTGGCTCCCATTGTCTCCTGGCATGTAGAATTATCCCTGCTCCT-CCCCTTTTTCTGAGTGAGAAAGGTGGG-AAATAAAATAATGAAGCCGTGAGTAGGTGAGGTGTTAGGGAGA----CAGCTTGCC-----AGGGTGGGCAGCACAGATGACTGGCGGGTGGGGAGGGAGGTGGTGGGAGGCTAATGTGCAGATCCTCAGATCTCTGAGA-----------AACAAGGTGGAGGAGACTCAGTCTGG-TGTGCAGAGTTGCAGGTGGGGGCACTGGTGGGTGC-----------------TACACCGAGGCACAGGT-GTTTCCTGGGAAGAAGGTGGTGTGGTCTTTTTTTGGCTAT---G i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 756536 622 - 940639 CTTCAGAAGAGAAGGGAGTGTATCTTCTACCTAATGCATCCTGCCAG-CAGGAGAATC---------AGATT-TTTTTGCCAGAGCTGCTGGACCTAG-GGGTCTGGAATTTGAGCTGGCTTTATGAGCATTTGTG----GAAAGTGGAG--TGGGTAGTGGGGAGGAGGAGGAGGATAAAGAGTACTGGTTGCTCAG--GTTGGGGAAATGCGGGAGGTGTGAGGAGGAAGAGGGACGTACC------AGAAGGCCAGGGGGTGGGCTTGCAGGAGCTGTGAGGGGAAGAGTGTGGCACC----------AGGGGGCAGGGGC-TGGGTCTAGCTGGCTCCCCATGTCTTCTGGCTTGTATGATTATCCCTGCTCCTCCTCCTTCCTCTGAGTGAGAAAGGTGGG-GAATAAAATAATGAAGCCGTGAGTAGGTGAGGTGTTAGGGAGA----CAGCTTGCC-----AGGGTGGGCAGCACAGATGACTGGCGGGTGGAGAGGGAGGTGGTGGGAGGTGAATGTGCAGATCCTCAGATCTCTGAGA-----------AATGATATGGAGGGGGCTCAGCCTGGACTTGCAGAATTGCAGGTGGGGGCAGTGGTGGGTGA-----------------CAG-CTAAGGGACAGGT-GATCCCTGGTAAGAAGGTGATGTGGTCTTTTCCTGTCTATGGAG i proCoq1.NW_012152163v1 I 154 I 27 s otoGar3.GL873522 1224602 613 + 48283576 CTTTAGAAGAGAAGGGAGTGTGTCTTCTACTTAATGCATCCTTCCAG-CTAGACAATC---------AGG-C-TTTTTGTCAGAGGTA-TAGACCTAG-GGGTCTGGAATTTGGCCTTGCTTTATGAGCATTTATG----GAAAGCAGAG--GAGGAAGGAGTGGGAAGGAGAAGGGGATAGAGTACTGATTGCTTAG--GTTGGCATCCTGAGAGAGATGGGAGATGGAAGAGGGA-GTATC------AGAAGGCCA-GGGGTGGGTTTGCAGGAGCTGTGGGGG---AAGCCAAGCACC----------A-GAGGCATGGGC-TAGGTCCAATCAGCTCCCACTATTGTCTGACTTTTATGATCATGCCTGCTTCTCCTTCTTCTTCTGAGTGAGAAAGGTGGG-AAATAAAATAATGAAGCCGTGAGTAGGTGAGGTGTTAGGGAGA----CAGCTTGCC-----AGGGTGGGCAGCACAGATGACTAGAGGGTGGGGAAGGACATGGTGGGAGGCAAACGTGCAGATCCTTAGATCTCTGAGA-----------AATGGTGTGGAGGGGGCTCAGCTAGGGTGTGCAGAGTTGCAGGT-GGGGTGCTGGTAGGTGA-----------------TAG-CCAAGAGATAGGT-GATCCCTGGTAAGAAGGTGATGTGGTCTTTTCTTAGCTATGGAA i otoGar3.GL873522 I 1 I 7 s canFam3.chr4 37168445 595 + 88276631 -------------CAGAGTGTGCC--CTAGCTAACAAATCCTGCCCAATAGGAGAATT---------GAG-CATTTTTGCCAGAGCCG-TGGACATGGAGGGTCTGAAACTTGGCCTGGCTTTGTGAGCAGTCTTG----GGCAGAGCAAAAGGGA-------AGAGAGGTGGGGACTGGGAAGCACTGGATGCTCAGC-GTGGGAGTGATAGGAGAGGTATGCGGAGGAAAAGGGGAGCACC------AGAAGGCCAG-AGGTAGGCTTGTGGGAGCTGTGGGTGGG--GGCATGGCACC----------AGGGGTCAGGGGC-TGCATCTGGCTGGCTCTCAGGGTCTCCTGCCTTGTGTGATTATTTGTGCTCC--AAGCTTTCCCTGAGTGGGACAAGTGGGAAAATAAAATAATGAAGT-------AGGTGAGGTGTTAGAGAGATAGGCAGCTTGCCCAGCTGGGCTGGGTGGCACAGATGACTGGAGGGTGGGGAGGGAGG-AGTTGGAGGGGAGTGTGCAGATCT---GAACTCTCAGA-----------AAC-GGGTGGAGGGGACTCAGCTTGGGTGTGCAGAGTCACAGGTGGAGGTA-TGGAGGGTGA-----------------TA--CCAAGGGACAGGG-GCTCCCTGGGGAGAAGGTGATATGATATTTTTTTGGCCATGGAG i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 244779 625 - 960158 -TCC---AGAGGAAAGGGAGGG-----TAGCCAACACATCCAT--AGGCAAGAGCATCATTAGGCAAGAG-C-AT-----CAGAGCTA-TGGAACTGG-AGGTGTGGAACTTGGCCTGGCTTAATGGGAGATCTTGGTGCGGTAGGGGGGTAGAGGGAGCGGGGTAGGGG--GTGGATGGAGAGTACT-GCTGCTCAGCAGCAAGGGGTGTGTGGGAACAGTGGGGAGGAATAGGGAAACACC------AGAAAG--------------TGTGGGAGCTGTGAGTGGA-GGGTGTGGTACCTGAGGTGGAGGCGAGGGGGGAGCAAAGGTCCAGCTGGCTTCCACCATCTCCTGGATTGTGTAAC--TTGCTGCTCCTCCCCCTCCCTCTAAGTGAGAAAGGTGGG-AAAAGAAAAC---AAGCCATGAGTAGGTGAGGTGTTAGGGAGA----CAGCTTGCA-----AGGGTGGGCAGCACAGATGACAGGCGGGTGGGGAGGGAGGTAGTGGGAGGTGAATGTACAGATCT---GAGCACTGAGATGGGGGTAGGGGAGGAGGTGGTGAGGGCTCAGCCTGG-GGTGCAGAGTTGTGAGTGGTGACAC-ACTGTGTGACCTTCCCTTCCTCCCTCCAC-CGCAGGGGCAGGG--------AAGAAGAAGGC-ATGTGGTTTTTCCCTGGCCACAGGG i dasNov3.JH562710 C 0 C 0 e mm10.chr13 65979384 6914 - 120421639 I a score=307326.000000 s hg38.chr5_KI270795v1_alt 38980 25 + 131892 GAGATTTTGAAATGTACTTGG-GTAA s panTro5.chr5 5287538 25 - 181907262 GAGATTTTGAAATGTACTTGG-GTAA i panTro5.chr5 C 0 C 0 s panPan2.chr5 5549911 25 - 183735486 GAGATTTTGAAATGTACTTGG-GTAA i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1681693 25 + 3967317 GAGATTTTGAAATGTACTTGG-GTAA i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4506165 25 + 163208435 GAGATTTTGAAATGTACTTGG-GTGA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5738780 25 - 180051392 GAGATTTTGAAATGTGCTTGG-GTAA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5924589 25 - 181584905 GAGATTTTGAAATGTGCTTGG-GTAA i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 953653 25 - 16193990 GAGATTTTGAAATGTGCTTGG-GTAA i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1776631 25 - 21434487 GAGATTTTGAAATGTGCTTGG-GTAA i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4739942 25 - 82825804 GAGATTTTGAAATGTGCTTGG-ATAA i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 234893 25 + 2521317 GAGATTTTGAAATGTGCTTGG-GTAA i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1726170 25 - 2415367 GAGATTTTGAAATGTGCTTAG-GTAA i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64068098 25 + 204313951 GAGATTTTGAAATGTACTTGG-GTAA i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2196260 25 + 10068113 GAGATTTTGAAATGTGCTTGG-GTAA i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 51275 25 - 709587 GAGATTTTGAAATGTGCTTGG-GTAA i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1152191 25 - 2246441 GAGATTTTGAAATGTAGTTGG-GTAA i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1225222 25 + 48283576 AGAATTTTGAAATGTTCTCAGTGTA- i otoGar3.GL873522 I 7 C 0 s canFam3.chr4 37169040 25 + 88276631 GAGGATTTGAAATGTTCTTGG-ATAA i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 245404 25 - 960158 AAAACTTTGAAATGTTACTGGTGTG- i dasNov3.JH562710 C 0 C 0 e mm10.chr13 65979384 6914 - 120421639 I e proCoq1.NW_012152163v1 757158 27 - 940639 I a score=3674399.000000 s hg38.chr5_KI270795v1_alt 39005 269 + 131892 TTTGTTTTTAGTCAAATTTCCTTCTGACTGGGTTAT-TTAAAGCGTAGAATGGAATGGAACataatagctaccatttattaagtatctaccgtatgcttg-----gaatgcatttcacgtgcatcaacccacttca-tatcacatttaccctgtgaggtaggttctgttactaattccattt-acaggcgaggagtctgtgtctcagggatatggtggctagttcaagCCCCCGCTGC---------------A--------------TTTTATTTATTTGAGATGAGAAAGATGTTCATGGGGGA s panTro5.chr5 5287563 268 - 181907262 TTTGTTTTTAGTCAAATTTCCTTCTGACTGGGTTAT-TTAAAGTGTAGAATAGAATGG-ACataatagctaccatttattaagtgtctaccgtatgcttg-----gaatgcatttcacgtgcatcaacccacttca-tatcacatttaccctgtgaggtaggttctgttactaattccattt-acaggagaggagtctgtgtctcagggatatggtggctagttcaagCCCCCGCTGC---------------A--------------TTTTATTTATTTGAGATGAGAAAGATGTTCATGGGGGA i panTro5.chr5 C 0 C 0 s panPan2.chr5 5549936 268 - 183735486 TTTGTTTTTAGTCAAATTTCCTTCTGACTGGGTTAT-TTAAAGTGTAGAATAGAATGG-ACataatagctaccatttattaagtatctaccgtatgcttg-----gaatgcatttcacgtgcatcaacccacttca-tatcacatttaccctgtgaggtaggttctgttactaattccattt-acaggcgaggagtctgtgtctcagggatatggtggctagttcaagCCCCCGCTGC---------------A--------------TTTTATTTATTTGAGATGAGAAAGATGTTCATGGGGGA i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1681718 269 + 3967317 TTTGTTTTTAGTCAAATTTCCTTCTGACTGGGTTAT-TTAAAGTGTAGAATAGAATGGAACataatagctaccatttattaagtatctaccgtatgcttg-----gaatgcatttcacgtgcatcaacccacttca-tatcacatttaccctgtgaggtaggttctgttactaattccatat-acaggtgaggagtctgtgtctcagggatatggtggctagttcaagCCCCCGCTGC---------------A--------------TTTTATTTATTTGAGATGAGAAAGATGTTCATGGGGGA i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4506190 269 + 163208435 TTTATTTTTGGTGAAATTTCCTTCTGACTGGGTTAT-TTAAAGTGTAGAATAGAATGGAACataatagctaccatttattaagtatctaccgtatgcttg-----gaatgcatttcacgtgcatcaacccacttca-tatcacatttaccctgtgaggtaggttctgttactaattccattt-acaggcgaggagtctgtgtctcagggatatggtggctagttcaagCCCCCGCTGC---------------A--------------TTTTATTTATTTGAGATGAGAAAGATGTTCATGGGGGA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5738805 279 - 180051392 TTTATTTTTAGTGAAATTTCCTTCTGACTGGGTTAT-TTAAAGTGTAGAATAGAATGGAACataatagctaccatttattaagtatctactgtatgcttg-----gaatgcatttcacgtgcatcaacccacttca-tatcacatttaccctgtgaggtaggttctgttactaattccattt-acaggcgaggagtctgtgtctcagggatatggtggctagttcaagCCCCCGCTGC----A-TTTTATTTTA--------------TTTTATTTATTTGAGATGAGAATGATGTTCAGGAGGGA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5924614 279 - 181584905 TTTATTTTTAGTGAAATTTCCTTCTGACTGGGTTAT-TTAAAGTGTAGAATAGAATGGAACataatagctaccatttattaagtatctactgtatgcttg-----gaatgcatttcacgtgcatcaacccacttca-tatcacatttaccctgtgaggtaggttctgttactaattccattt-acaggcgaggagtctgtgtctcagggatatggtggctagttcaagCCCCCGCTGC----A-TTTTATTTTA--------------TTTTATTTATTTGAGATGAGAATGATGTTCAGGAGGGA i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 953678 279 - 16193990 TTTATTTTTAGTGAAATTTCCTTCTGACTGGGTTAT-TTAAAGTGTAGAATAGAATGGAACataatagctaccatttattaagtatctactgtatgcttg-----gaatgcatttcacgtgcatcaacccacttca-tatcacatttaccctgtgaggtaggttctgttactaattccattt-acaggcgaggagtctgtgtctcagggatatggtggctagttcaagCCCCCGCTGC----A-TTTTATTTTA--------------TTTTATTTATTTGAGATGAGAATGATGTTCAGGAGGGA i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1776656 279 - 21434487 TTTATTTTTAGTGAAATTTCCTTCTGACTGGGTTAT-TTAAAGTGTAGAATAGAATGGAACataatagctaccatttattaagtatctactgtatgcttg-----gaatgcatttcacgtgcatcaacccacttca-tatcacatttaccctgtgaggtaggttgtgttactaattccattt-acaggcgaggagtctgtgtctcagggatatggtggctagttcaagCCCCCGCTGC----A-TTTTATTTTA--------------TTTTATTTATTTGAGATGAGAATGATGTTCAGGAGGGA i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4739967 279 - 82825804 TTTATTTTTAGTGAAATTTCCTTCTGACTGGGTTAT-TTAAAGTGTAGAATAGAATGGAACataatagctaccatttattaagtatctactgtatgcttg-----gaatgcatttcacgtgcatcaacccacttca-tatcacatttaccctgtgaggtaggttctgttactaattccattt-acaggcgaggagtctgtgtctcagggatatggtggctagttcaagCCCCCGCTGC----A-TTTTATTTTA--------------TTTTATTTATTTGAGATGAGAACAATGTTCATGAGGGA i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 234918 279 + 2521317 TTTATTTTTAGTGAAATTTCCTTCTGACTGGGTTAT-TTAAAATGTAGAATAGAATGGAACataatagctaccatttattaagtatctactgtaggcttg-----gaatgcatttcacatgcatcaacccacttca-tatcacatttaccctgtgaggtaggttctgttactaattccattt-acaggcgaggagtctgtgtctcagggatatggtggctagttcaagCCCCCGCTGC----A-TTGTATTTTA--------------TTTTATTTATTTGAGATGAGAATGGTGTTCAGGAGGGA i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1726195 279 - 2415367 TTTATTTTTAGTGAAATTTCCTTCTGACTGGGTTAT-TTAAAGTGTAGAATAGAATGGAACataatagctaccatttattaagtatctactgtatgctag-----gaatgcatttcacgtgcatcaacccacttca-tatcacatttaccctgtgaggtaggttctgttactaattccattt-acaggcgaggagtctgtgtctcagggatatggtggctagttcaagCCCCCGCTGC----A-TTTTATTTTA--------------TTTTATTTATTTGAGATGAGAACGATGTTCATGAGGGA i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64068123 278 + 204313951 TTTATTTTTAGTGAGATTTCCTTCTGACTATGTTAT-TTAAAGTGTAGAATAGAATGGAACatagtagctgccatttattaagtatctaccatatgcttg-----gaatgcatctcatgtacatcaacccacttca-tatcacatttaccctgtgaggtaggttctgctactaattccattt-acaggtgaggagtctgtgtctcacagatatggtggttcgttcaaAACCCCTCTGT------ATTTATTTTA--------------TTTTATTGATTTGAGATGAGAAAGATGTTCATGGGGGA i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2196285 278 + 10068113 TTTATTTTTAGTGAGATTTCCTTCTGACTAGGTTAT-TTAAAGTGTAGAATAGAATGGAACataatagctaccatttattaagtatctaccatatgcttg-----gaatgcatctcatgtgcatcaacccacttca-tatcacatttaccctatgaggcaggttctgttgctaattccattt-acaggtgaggagtctgtgtctcacagaTATGGTGGTTCCTTCAAAACTCCTCTGC------ATTTATTTTA--------------TTTTATTGATTTGAGATGAGAAAGATGTTCATGGGGGA i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 51300 278 - 709587 TTTATTTTTAGTGAGATTTCCTTCTGACTAGGTTAT-TTAAAGTGTAGAATAGAATGGAACacaatagctaccatttattaagtatctaccatatgcttg-----gaatgcatctcatgtgcatcaacccacttca-tatcacatttaccctgtgatgtcggttctgttactaattccattt-acaggtgaggagtctgtgtctcacagatattGCGGTTCCTTCAAAACCCCTCTGC------ATTTATTTTA--------------TTTTATTTATTTGAGATGAGAAAGATGTTCATGGGGGA i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1152216 278 - 2246441 TTTATTTTTAGTGAGATTTCCTTCTGACTAGGTTAT-TTAAAGTGTAGAATAGAATGGAACataatagctaccatttattaagtatctaccatatgcttg-----gaatgcatctcatgtgcatcagcccacttca-tatcgcatttaccctgtgaggtaggttctgttactaattccattt-acaggtgaggagtctgtgtctcacagaTATGGTGGTTCATTCAAAACCCCTCTGC------ATTTATTTTA--------------CTTTATTGATTTGAGATGAGAAAGATGTTCATGGGGGA i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 757185 285 - 940639 TTTATTTTTAGTGAGATTTCCTTCTGACTGGTTTTTATAAAAATGTAGAATGGAACAGAGCataatagctaccatttattaagtatctaccgtatgctca-----gaatacattttatatgcatcaacccatttca-tatcat-attaccctacaaggtaggtactagcactaattccattt-acaggtgagaaatctgagtctctgggatatggtggcttgctcaagCACCTTCTGCtttta-ttttattttatta-----------ttttatttatttGAAGTGAGAGAGATGTTCGAG-GGGA i proCoq1.NW_012152163v1 I 27 C 0 s otoGar3.GL873522 1225247 294 + 48283576 TTTATTTTCAGTGAGATTTCTTTCTAATCGGTTTTTATAAAAATGTAGAATTGAATGGAGCataatagctaccatttattaagtatctactgtatgctcaaaatggaatacatttcacatgcctcaatccatttca-tattgcaatgactctacaa---------ctgtaatgattccattt-atagatgaggaatctgggttgtagggatatggtggcttgttcaaggcctttctacttttatttttattttattactattttaagtttttatttATTTGAAATGAAAGAGATGTTCATG-GGGA i otoGar3.GL873522 C 0 C 0 s canFam3.chr4 37169065 272 + 88276631 -TTCTTTTTAGTGAGATTGTCTTTTGACTGGGTTTG-TAAAAGTACAGAATGGAATGGAACataatagttaccattcactaagtcactaccgtatgttca-----gagcccatttcatatgtgtcattttggttca-tatcacaagtactttctgaggtagggactgttactaactctacctgacagctgaagaatctgagtctcaaggacatggtggtttactcaagctccttcggc------------tTGG--------------ATTTATTTATTTTAAACGAGAGAGATGTTAATAAGGGA i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 245429 262 - 960158 CTTATTTTGATTGAGATTCCCTTTGGACTAGGGTTT-T---AGTGTGGAATGGAATTGAGTGtaaaagctaccatttattaagtgcctactatatgctca-----gaacccatttcagctgcatcaactcatttcattatcacagttaccct--gaagtggctactattactaatttaattt-tacagtgaggagtcgtagtctt--ggagGTGATGGCTCATGCAAGCACCCTATGC------------TTTA--------------TTTTCTTTTTTCA----GTGAGAGATGTTGATGAGGAA i dasNov3.JH562710 C 0 I 6502 e mm10.chr13 65979384 6914 - 120421639 I a score=5302964.000000 s hg38.chr5_KI270795v1_alt 39274 424 + 131892 GTCAGAGCCTGCTTCGATAGAAATCATCC-AGTAGTTTTTATTGTTT-TGTTTCTTC---------------CCAGGGCCTGCTCTTCCACTTGGCAAATTCGGAGCGCTGGAAGGTGGGGTG-G-GATGGGGACTTGGGAAAGAAAATAAGG-ATTAAAGACACAGTGGATGCCCAAGAGAAAAGAAAACTTAATTGTACATTTTCGTAATAACCCTGTTTGATA---ACCATTGAGagaactccaaatgttttgtccacctaagagcaaccctctgtcttcagggagacaggagctgcatccccagcactgcctccctgcctgg---gggcgggcatttgaccctagctgtgccaatcatagcattccacctccacagcaatagtaattggtccaggcatgagcacatgactcaaaccaggccaatcacatccttttct-gagattttt-- s panTro5.chr5 5287831 422 - 181907262 GTCAGAGCCTGCTTCGATAGAAATCATCC-AGTAGTTTTTATTGTTT-TGTTTCTTC---------------CCAGGGCCTGCTCTTCCACTTGGCAAATTCGGA--GCTGGAAGGTGGGGTG-G-GATGGGGACTTGGGAAAGAAAACAAGG-ATTAAAGACACAATGGATGCCCAAGAGAAAAGAAAACTTAATTGTACATTTTTGTAATAACCCTGTTTGATA---ACCATTGAGagaactccaaatgttttgtccacctaagagcaaccctgtgtcttcagggaaacaggagctgcatccccagcactgcgtccctgcctgg---gggcgggcatttgaccctagctgtgccaatcatagcattccacctccacagcaatagtaattggtccaggcatgagcacatgactcaaaccaggccaatcacatccttttct-gagattttt-- i panTro5.chr5 C 0 C 0 s panPan2.chr5 5550204 422 - 183735486 GTCAGAGCCTGCTTCGATAGAAATCATCC-AGTAGTTTTTATTGTTT-TGTTTCTTC---------------CCAGGGCCTACTCTTCCACTTGGCAAATTCGGA--GCTGGAAGGTGGGGTG-G-GATGGGGACTTGGGAAAGAAAACAAGG-ATTAAAGACACAATGGATGCCCAAGAGAAAAGAAAACTTAATTGTACATTTTTGTAATAACCCTGTTTGATA---ACCATTGAGagaactccaaatgttttgtccacctaagagcaaccctgtgtcttcagggaaacaggagctgcatccccagcactgcgtccctgcctgg---gggcgggcatttgaccctagctgtgccgatcatagcattccacctccacagcaatagtaattggtccaggcatgagcacatgactcaaaccaggccaatcacatccttttct-gagattttt-- i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1681987 422 + 3967317 GTCAGAGCCTGCTTCGATAGAAATCATCC-AGTAGTTTTTATTGTTT-TGTTTCTTC---------------CCAGGGCCTGCTCTTCCACTTGGCAAATTCGGA--GCTGGAAGGTGGGGTG-G-GATGGGGACTTGGGAAAGAAAACAAGG-ATTAAAGACACAGTGGATGCCCAAGAGAAAAGAAAACTTAATTGTACATTTTTGTAATAACCCTGTTTGATA---ACCATTGAGAGAACTCCAAATGTTTTGTCCACCTAAGAGCAACCCTCTCTCTTCAGGGAGACAGGAGCTGCATCCCCAGCACTGcctccctgcctgg---gggcgggcatttgaccctagctgtgccaatcatagcattccacctccacagcaatagtaattggtccaggcatgagcacatgactcaaaccaggtcaatcacatccttttct-gagattttt-- i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4506459 422 + 163208435 GTCAGAGCCTGCTTCGATAGAAATCATCC-AGTAGTTTTTATTGTTT-TGTTTCTTC---------------CCAGGGCCTGCTCTTCCACTTGGCAAATTCAGA--GCTGGAAGGTGGGGTG-G-GATGGGGGCTTGGGAAAGAAAACAAGA-ATTAAAGACACAATGGATGCGCAAGAGAAAAGGAAACTTAATTGTACATTTTCATAATAACCCTGTTTGATA---ACCActgagagaactccaaatgttttgtccacctaagagcaaccctctgtcttcagggaaacaggagctgcatccccagcactgcctccctgcctgg---gggtgggcatttgaccctagctgtgccaatcatagcattccacctccacagcaatagtaattggtccaggcgtgagcacatgactcaaaccaggccaatcacatccttttct-gagattttt-- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5739084 422 - 180051392 GTCAGAGCCTGCTTCAGTGGAAATCATCC-AGTAGTTTTTATGGTTT-TGTTTCTTC---------------CCAGGGCCTACTCTTCCACTTAGCAAATTTGGA--ACTGGAACGTGAGGTG-G-GATGGGGGCTTGGGAAAGAAAACAACG-ATTAAAGACACAATGGATGCCCAAGAGAAAAGGAAACTTAATTGTACATTTTCATAATAACCCTGTTTGATA---ACCATTGAGagaactccaaatattttgtccatctaagagcaaccctctgtcttcagggaaacaggagctgcatccccagcactgcctccctgcctgg---ggttgggcatttgaccctagctgtgccaatcatagcattccacctccacagcaatagtaattggtccaggcatgagcacatgactcaaaccaggccaatcacatccttttct-gagattttt-- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5924893 422 - 181584905 GTCAGAGCCTGCTTCAGTGGAAATCATCC-AGTAGTTTTTATGGTTT-TGTTTCTTC---------------CCAGGGCCTACTCTTCCACTTAGCAAATTTGGA--ACTGGAACGTGAGGTG-G-GATGGGGGCTTGGGAAAGAAAACAACG-ATTAAAGACACAATGGATGCCCAAGAGAAAAGGAAACTTAATTGTACATTTTCATAATAACCCTGTTTGATA---ACCATTGAGAGAACTCCAAATATTTTGTCCATCTAAGAGCAACCCTCTGTCTTCAGGGAAACAGGAGCTGCATCCCCAGCACTGcctccctgcctgg---ggttgggcatttgaccctagctgtgccaatcatagcattccacctccacagcaatagtaattggtccaggcatgagcacatgactcaaaccaggccaatcacatccttttct-gagattttt-- i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 953957 422 - 16193990 GTCAGAGCCTGCTTCAGTGGAAATCATCC-AGTAGTTTTTATGGTTT-TGTTTCTTC---------------CCAGGGCCTACTCTTCCACTTAGCAAATTTGGA--ACTGGAACGTGAGGTG-G-GATGGGGGCTTGGGAAAGAAAACAACG-ATTAAAGACACAATGGATGCCCAAGAGAAAAGGAAACTTAATTGTACATTTTCATAATAACCCTGTTTGATA---ACCATTGAGATAACTCCAAATATTTTGTCCATCTAAGAGCAACCCTCTGTCTTCAGGGAAACAGGAGCTGCATCCCCAGCACTGcctccctgcctgg---ggttgggcatttgaccctagctgtgccaatcatagcattccacctccacagcaatagtaattggtccaggcatgagcacatgactcaaaccaggccaatcacatccttttct-gagattttt-- i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1776935 422 - 21434487 GTCAGAGCCTGCTTCAGTGGAAATCATCC-AGTAGTTTTTATGGTTT-TGTTTCTTC---------------CCAGGGCCTGCTCTTCCACTTAGCAAATTTGGA--ACTGGAACGTGAGGTG-G-GATGGGGGCTTGGGAAAGAAAACAACG-ATTAAAGACACAATGGATGCCCAAGAGAAAAGGAAACTTAATTGTACATTTTCATAATAACCCTGTTTGATA---ACCATTGAGagaactccaaatattttgtccatctaagagcaaccctctgtcttcagggaaacaggagctgcatccccagcactgcctccctgcctgg---ggttgggcatttgaccctagctgtgccaatcatagcattccacctccacagcaatagtaattggtccaggcatgagcacatgactcaaaccaggccaatcacatccttttct-gagattttt-- i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4740246 421 - 82825804 GTCAGAGCCTGCTTCAGTGGAAATCATCC-AGTAGTTTTTACAGTTT-TGTTTCTTC---------------CTAGGGCCTGCTCTTCCACTTGGCAAATTCGGA--ACTGGAACGTGAGGTG-G-GATGGGGGCTTGGGAAAGAAAACAAC--ATTAAAGACACAATGGATGCCCAAGAGAAAAGGAAACTTAATTGTACATTTTCGTAATAACCCTGTTTGTTA---ACCATTGAGAGAACTCCAAATATTTTGTCCATCTAAGAGCAACCCTCTGTCTTCAGGGAAACAGGAGCTGCATCCCCAGCACTGcctccctgcctgg---ggttgggcatttgaccctagctgtgccaatcatagcattccacctccacagcaatagtaattggtccaggcatgagcacatgactcaaaccaggccaatcacatccttttct-gagattttt-- i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 235197 422 + 2521317 GTCAGAGCCTGCTTCAGTGGAAATCATCC-AGTAGTTTTTATGGTTT-TGTTTCTTC---------------CCAGGGGCTGCTCTTCCACTTAGCAAATTTGGA--ACTGGAACGTGACGTG-G-GATGGGGGCTTGGGAAAGAAAACGACG-ATTAAAGACACAATGGATGCCCAAGAGAAAAGGAAACTTAATTGTACATTTTCATAATAACCCTGTTTGATA---ACCATTGGGagaactccaaatattttgtccatctaagagcaaccctctgtcttcagggaaacaggagctgcatccccagcactgcctccctgcctgg---ggttgggcatttgaccctagctgtgccaatcatagcattccacctccacagcaatagtaattggtccaggcatgagcacatgactcaaaccaggccaatcacatccttttct-gagattttt-- i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1726474 408 - 2415367 GTCAGAGCCTGCTTCAGTGGAAATCATCC-AGTGGTTTTTAT------------------------------CCAGGGCCTGCTCTTCCACTTGGCAAATTCAGA--ACTGGAACGTGAGGTG-G-GATGGGGGCTTGGGAAACAAAACAACG-ATTAAAGACACAGTGGATGCCCAAGAGAAAAGGAAACTTAATTGTACATTTTCATAATAACCCTGTTTGATA---ACCATTGAGagaactccaaatattttgtccatctaagagcaaccctctgtcttcagggaaacaggagctgcatccccagcactgcctccctgcctgg---ggttgggcatttgaccctagctgtgccaatcatagcattccacctccacagcaatagtaattggtccaggcatgagcacatgactcaaaccaggccaatcacatccttttct-gagtttttg-- i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64068401 425 + 204313951 GTCAGAGCCTGCTTCCATAGAAATCATCC-AGTATTTTTCATTGTTT-TGTTTCTTC---------------CCAGGGCCTGCTCTTCCACTTGTTAAATTCGGA--GCTGGAAGGTGGGGTG-G-GATGGGGGTTTGAGAAAGAAAGCTAGG-ATTAAAGACACAATGGATGCCCAAGAGAAAAGGAAACTCAATTGTACCTTTTCATAATAACCCTGTTTGATAAATACCATTGAGAGAACTCCAAATATTTTGTCCACCTAAGAGCAACCCTCTGTGTTCAGGGAAACAGGAGCTGTATCTCCAGCACTGcctccctgcctgg---ggatgggcatttgactctagctgtgcccatcataccatttcacctccatggcaatagtaattggtcaaggcatgagcacatgactcaaaccaggccaatcacatccttttct-gagattttt-- i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2196563 421 + 10068113 GTCAGAACTTGCTTCCATAGAAATCATCC-AGTATTTTTTATTGTTT-TGTTTCTTC---------------CCAGGGCCTGCTCTTCCACTTGTTAAATTCAGA--GCTGGAAGGTGGGGTG-G-GATGGGGGCTTGGGAAAGAAAGCAAGG-ATTAAAGACACAATGGATGCCCAAGGGAAAAGGAAACTCAGCTGTACATTTTCATAATAACCCTGTTTGATAAATACCATTGAGAGAACTCGAAATATTTTGTCCACCTAAGAGCAACCCTCTGTCTTCAGGGAAACAG----TGTATCTCTAGCACTGCCTCCCTGCCTGG---GGATGGGCATTTGGCTCTAGCTGTGTCAATCATACCATTTCACCTCCATGGCAACAGTAATTGGTCCAGGCATGAGCACATGACTCAAACCAGGCCATTCACATCCTTTTGT-GAGATTTTT-- i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 51578 425 - 709587 GTCAGAGCCTGCTTCCATAGAAATCATCC-AGTATTTTTTATTGTTT-TGTTTCTTC---------------CCAGGGCCTGCTCTTCCACTTGTTAAATTCAGA--GCTGGAAGGTGGGGTG-G-GATGGGGGCTTGGGAGAGAAAGCTAGG-ATTAAAGACACAATGGATGCCCAAGAGAAAAGGAAACTCAATTGTACATTTTCATAATAACCCTGTTTGATAAATACCATTGAGAGAACTCGAAATATTTTGTCCACCTAAGAGCAACTCTCTGTCTTCAGGGAAACAGGAGCTGTATCTCCAGCactgcctccctgcctgg---ggatgggcatttgactctagctgtgccagtcataccatttcacctccatgacaatagtaattggaccaggcatgagcacatgactcaaaccaggccaatcacatccttttct-gagattttt-- i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1152494 425 - 2246441 GTCAGAGCCTGCTTCCATAGAAGTCATCC-AGTATTTTGTATTGTTT-TGTTTCTTC---------------CCAGGGCCTGCTCTTCCACTTGTTAAATTCCGA--GCTGGAAGGTGGGGTG-G-AATGGGGGCTTGGGAAAGAAATCTAGG-ATTAAAGACTCAATGGATACCCAAGAGAAAAGGAAACTCAATTGTACATTTTCATAATAACCCTGTTTGATAAATACCATTGAGAGAACTCCAAATATTTTGTCCACCTGAGAGCAACCCTCTGACTTCAGGGAAACAGGAGCTGTATCTCCAGCACTGcctccctgcctgg---ggatgggcatttgactctagctgtgccaatcaaaccatttcacctccatggcaatagtaattggtccaggcatgagcacatgactcaaaccaggccaatcacatccttttct-gagattttt-- i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 757470 426 - 940639 GTTAGAGCCTGTTTAGATAGAACTCACCC-AATTGTTTTTTTATTCT-GTTTTTTTC---------------CCAGGGCCTGCTCTTCTGCTTGGCAAATTTGCA--GCTGGAAGGCAGGGTG-GTGGTGGAGACTTGGGAAAGAAAACAAAGTATTAAAGATATACTGGATGCCAAAGAGAAAAG-AAACTTCATTGTACATTCTCATAATAACCTTGTTTGGCAAATACCATTGTGAGGACTCCTAATATTTTGTCTACCAGAATGCAATCCTCCGTCTTCAGGGAAACAGGATGTGCATACCCAGCAccacctccctgcctgg---gggcaggcattggatcctaggtgtgccaatcatagcattccatctccttggctacagtaattggtccagacatgaacaagtgactcaaagcaggccaatcagatcctttcct-gagattttt-- i proCoq1.NW_012152163v1 C 0 I 141 s otoGar3.GL873522 1225541 438 + 48283576 GCCAGAGCCTGTTTAGATAGAACTCACTC-AATGCtttttttattct-gttttttttttttttttttttttACCAGGGCCTG---TTCTGCTTGGGAGAACTGTA--GCTGAAAGGCAGGGTC-ACGGTGGAGACTTGGGAAAGAAAACAAAGTATTAAAGATATACTGGATGCCAAAGAGGAAAG-AAGCTTTGTTGTACGTTCTTGTAGGAACCTTGTTTGGCAAATACCATTGAGAGGACTCCTAGTATTTTGTCTACCTGAGAGCAGTGCTCCATCTTTGGGGATACAGGAGCTGCATACTCAGCACCTTCTCCCTGCCTgg---gtgcaggcatttggtactagccgtgccagtcataggatttcttctccctggccacagtaattggcccgggcacgagcaagtgacttaaaccaggccaatcacatcttttcCT-GATATTGAT-- i otoGar3.GL873522 C 0 C 0 s canFam3.chr4 37169337 392 + 88276631 GCGAGAGCCTGCTTAGACAGAACTTACCCAAGCGTTTTTTGTTTTTTGTGTTTTTTC---------------CCAGGACCTGCTCTTTAGCTTGGCAAATTTGGG--GCTGGAGAGCAGGGTGAG-GGTGGTGGGTTGAGAAAATAAAAGAA--ATTGAAGACACATTGGATACCAAAGAAAAAAAGAAACTTAGA-GTACATTCTTGCAACAACTATGCCTTATAGATATGATTGAGAGGATTCCTGTGATTTTGTCTGT------GCAACCC--------------------------------AGCACCTGCCACTAGTCAAGGCAGTGTACGTATTTCGCCCTAGCTGTgccaggca-agtattccatctccttggccacagtgattgggccatg-atgagcatgtgacctaaacgaggccaattatatcctctcttagggatttttTT i canFam3.chr4 C 0 C 0 e mm10.chr13 65979384 6914 - 120421639 I e dasNov3.JH562710 245691 6502 - 960158 I a score=1589939.000000 s hg38.chr5_KI270795v1_alt 39698 142 + 131892 tatttaaaattgg---agctCGTAACCTTACTTACCCCTCTAGCAAAGGGTAATGGTAGGTCTTCCCAGATCATCTGGCAAACACATTCTTAACCTTGTGGAGA---CACTGACTGGAACA-AATTAAAC--ATATGCCAAT-------A-AAGTAAAG s panTro5.chr5 5288253 142 - 181907262 tatttaaaattgg---agctcaTAACCTTACTTACCCCTCTAGCAAAGGGTAATGGTAGGTCTTCCCAGATCATCTGGCAAACACATTCTTAACCTTGTGGAGA---CACTGACTGGAACA-AATTAAAC--ATATGCCAAT-------A-AAGTAAAG i panTro5.chr5 C 0 C 0 s panPan2.chr5 5550626 142 - 183735486 tatttaaaattgg---agctcaTAACCTTACTTACCCCTCTAGCAAAGGGTAATGGTAGGTCTTCCCAGATCATCTGGCAAACACATTCTTAACCTTGTGGAGA---CACTGACTGGAACA-AATTAAAC--ATATGCCAAT-------A-AAGTAAAG i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1682409 142 + 3967317 TATTTAAAATTGG---AGCTTGTAACCTTACTTACCCCTCTAGCAAAGGGTAATGGTAGGTCTTCCCAGATCATCTGGCAAACACATTCTTAACCTTGTGGAGA---CACTGACTGGAACA-AATTAAAC--ATATGCCAAT-------A-AAGTAAAG i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4506881 143 + 163208435 tatttaaaatt-g---agCTCATAACCCTACTTACCCCTCTAGCAAAGGGTAATGGTAGGTCTTCCCAGATCATCTGGCAGACACATTCTTAACCTTGTGGAGA---CACTGACTGGAACA-AATTAAACAAATATGCCAAT-------A-AAGTAAAG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5739506 144 - 180051392 tatttaaaattgg---agctcaTAACCCTATTTACCCCTTTAGTAAAGGGTAATGGTAGGTCTTCCCAGATCATCTGACAGATACATTCTTAACCTTGTGGAGA---CACTGACTTGAACA-AATTAAACAGATATGCCAAT-------A-AAGTAAAG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5925315 144 - 181584905 tatttaaaattgg---agctcaTAACCCTATTTACCCCTTTAGTAAAGGGTAATGGTAGGTCTTCCCAGATCATCTGACAGATACATTCTTAACCTTGTGGAGA---CACTGACTTGAACA-AATTAAACAGATATGCCAAT-------A-AAGTAAAG i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 954379 144 - 16193990 tatttaaaattgg---agctcaTAACCCTATTTACCCCTTTAGTAAAGGGTAATGGTAGGTCTTCCCAGATCATCTGACAGATACATTCTTAACCTTGTGGAGA---CACTGACTTGAACA-AATTAAACAGATATGCCAAT-------A-AAGTAAAG i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1777357 144 - 21434487 tatttaaaattgg---agctcaTAACCCTATTTACCCCTTTAGTAAAGGGTAATGGTAGGTCTTCCCAGATCATCTGACAGACACATTCTTAACCTTGTGGAGA---CACTGACTTGAACA-AATTAAACAGATATGCCAAT-------A-AAGTAAAG i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4740667 144 - 82825804 tatttaaaattgg---agctcaTAACCCTATTTACCCCTTTAGCAAAGGGTAATGGTAGGTCTTTCCAGATCATCTGACAGACACATTCTTAACCTTGTGGAGA---CACTGACTTGAACA-AATTAAACAGATATGCCAAT-------A-AAGTAAAG i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 235619 144 + 2521317 tatttaaaattgg---agctcaTAACCCTATTTACCCCTTTAGTAAAGGGTAATGGTAGGTCTTCCCAGATCATCTGACAGACACATTCTTAACCTTGTGGAGA---CACTGACTTGAACA-AATTAAACAGATATGCCAAT-------A-AAGTAAAG i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1726882 144 - 2415367 tatttaaaattgg---agctcaTAACCCTATTTACCCCTTTAGCAAAGGGTAATGGTAGGTCCTCCCAGATCGTCTGACAGACACATTCTTAACCTTGTGGAGA---CACTGACTTCAACA-AATTAAACAGATATGCCAAT-------A-AAGTAAAG i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64068826 146 + 204313951 TATTTAAAATTGGAGCAGCTCATAACCCTGTTTA-CCCTTTAGCAAAGGGTAATGGTGGGTCTTCTTAGATCATCTGATGGACACATTCTTAACCTGGTGGAGA---CACTGACTTGAACA-AATTAAACAGATAGGCCAAT-------A-AAGTAAAG i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2196984 142 + 10068113 TATTTAAAATTGG---AGCTCATAACCCTATTTA-CCCTTTAGCAAAGGGTAAT-GTGGGTCTTCTTAGATCATTTGACAGACACATTCTTAACCTGGTGGAGA---CACCGACTTGAACA-AATTAAACAGATACGCTAAT-------A-ACTTAAAG i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 52003 143 - 709587 tatttaaaattgg---agctcaTAACCCTATTTA-CCCTTTAGCAAAGAGTAATGTTGGGTCTTCTTAGGTCATCTGACAGACACGTTCTTAACCTGATGGAGA---CACCGACTTGAACA-AATTAAACAGATACGCCAAT-------A-AAGTAAAG i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1152919 143 - 2246441 tatttaaaatcgg---agctcaTAACCCTATTTA-CCCCTTAGCAAAGGGTAATGGTGGGTCTTGTTAGATCATCTGACAGACACATTCTTAACCTGGTGGAGA---CACTGACTTGAACA-AATTAAACAGATACGCCAAT-------A-AAGTAAGG i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1225979 147 + 48283576 -TTTTTAAACTGG---AGTTCACAATCTTATTTAATTGTTTAGCAGAGGGCAATGATATGCCTTTCTAGATTATCTGATAGACACATTTTT------GTGGAGATACTACTGATTTGAAGG-AATTAAACAGACATGCCAATAGCAGCAA-AAGAAAAA i otoGar3.GL873522 C 0 I 1 s canFam3.chr4 37169729 141 + 88276631 TTTTTTAAAGTAG---AGCTGACAACCCTGTTTACCCCCTTAGCATAGCATAGC-GTAGGATAGCT---ATCATTTGACAGACACATTCTTTGCCCTGTGGAGA---CACTGACTTGAAAAGAATTAAGCAGACATGCAGAT-------AGAAGCAAA- i canFam3.chr4 C 0 C 0 e mm10.chr13 65979384 6914 - 120421639 I e proCoq1.NW_012152163v1 757896 141 - 940639 I e dasNov3.JH562710 245691 6502 - 960158 I a score=1547818.000000 s hg38.chr5_KI270795v1_alt 39840 128 + 131892 AAAAGATGGGCAG-----------TTTCTCTTTCTCCCTTCCAAAAGCCCTGATTTCTGTTTAGAGAGCTATGTAGTCCTAGAAACATTGACTCTccctgtccctgtgaccccagagtggaccacttggcctgggctgg s panTro5.chr5 5288395 128 - 181907262 AAAAGATGGGCAG-----------TTTCTCTTTCTCCCTTCCAAAAGCCCTGATTTCTGTTTAGAGAGCTATGTAGTCCCAGAAACATTGACTCTccctgtccctgtgaccccagagtggaccacttggcctgggctgg i panTro5.chr5 C 0 C 0 s panPan2.chr5 5550768 128 - 183735486 AAAAGATGGGCAG-----------TTTCTCTTTCTCCCTTCCAAAAGCCCTGATTTCTGTTTAGAGAGCTATGTAGTCCTAGAAACATTGACTCTccctgtccctgtgaccccagagtggaccacttggcctgggctgg i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1682551 128 + 3967317 AAAAGATGGGCAG-----------TTTCTCTTTCTCCCTTCCAAAAGCCCTGATTTCTGTTTAGAGAGCTATGTAGTCCTAGAAACATTGACTCTccctgtccctgtgaccccagagtggaccacttggcctgggctgg i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4507024 128 + 163208435 AAAAGATGGGCAG-----------TTTCTCTTTCTCCCTTCCAAAAGCCCTGATTTCTGTTTAGAGAGCTATGTAGTCCTAGAAACATCGACTCTCCCTGTCCCCATGACCCCAGAGTGGACCACTTGGCCTGGGCTGG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5739650 128 - 180051392 AAAAGATGGGCAG-----------TTTCTCTTTCTCCCTTCCAAAAGCTCCGATTTCTGTTTAGAGAGCTATGTAGTTTTAGAAACATCGACTCTCCCTGTCCCCGTGACACCAGAGGGGACCACCTGGCCTGGGCTGG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5925459 128 - 181584905 AAAAGATGGGCAG-----------TTTCTCTTTCTCCCTTCCAAAAGCTCCGATTTCTGTTTAGAGAGCTATGTAGTTTTAGAAACATCGACTCTCCCTGTCCCCGTGACACCAGAGGGGACCACCTGGCCTGGGCTGG i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 954523 128 - 16193990 AAAAGATGGGCAG-----------TTTCTCTTTCTCCCTTCCAAAAGCTCCGATTTCTGTTTAGAGAGCTATGTAGTTTTAGAAACATCGACTCTCCCTGTCCCTGTGACACCAGAGGGGACCACCTGGCCTGGGCTGG i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1777501 128 - 21434487 AAAAGATGGGCAG-----------TTTCTCTTTCTCCCTTCCAAAAGCTCTGATTTCTGTTTAGAGAGCTATGTAGTTTTAGAAACATCGACTCTccctgtccctgtgacaccagaggggaccacctggcctgggctgg i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4740811 122 - 82825804 AAAAGATGGGCAG-----------------TTTCTCCCTTCCAAAAGCTCCGATTTCTGTTTAGAGAGCTATGTAGTTCTAGAAACATCGACTCTCCCTGTCCCCATGACACCAGAGGGGACCACCTGGCCTGGGCTGG i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 235763 128 + 2521317 AAAAGATGGGCAG-----------TTTCTCTTTCTCCCTTCCAAAAGCTCTGATTTCTGTTTAGAGAGCTATGTAGTTTTAGAAACATCGACTCTCCCTGTccccgtgacaccagaggggaccacctggcctgggctgg i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1727026 128 - 2415367 AAAAGATGGGCAG-----------TTTCTCTTTCTTGCTTCCAAAAGCTCTGATTTCTGTTTAGAGAGCTATGTAGTTCTAGAAACATCGACTCTCCCTATCCCCGTGACACCAGAAGGGACCACCTGGCCTGGGCTGG i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64068972 122 + 204313951 AAAAGATGGGGAG-----------TTTCTCTTTTCTCCTTCCCAAAGCCCTGATTTCTGTTTAGA-AGCTATGTAGTTCTAGAAACATCAACTCTCCCTGTctccatgactccagaggggaccacttggc-----ctgg i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2197126 127 + 10068113 AAAAGATGAGGAA-----------TTTCTCTTTTCTCCTTCCCAAAGCCCTGATTTCTGTTTAGA-AGCTATGTAGTTGTAGAAACATCAACTCTCCCTGTccccatgactccagagtggaccacttggcctgggctgg i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 52146 127 - 709587 AAAAGATGGGGTG-----------TTTCTCTTTTCTCCTTCCCAAAGCCCTGATTTCTGTTTAGA-AGCTATGTAGTTCTAGAAACAGCAACTCTCCCTGTccccatgactccagaggggaccacttggcctgggctgg i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1153062 127 - 2246441 AAAAGATGGGGAG-----------TTTCTCTTTTCTCCCTCCCAAAGCCCTGATTTCTGTTTAGA-AGCTATGTAGTTCTAGAAACATCAACTCTccctatccccatgactccagaggggaccacttggcctgggctgg i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 758037 128 - 940639 AAAAAATAGGAAG-----------TTTCTCTTTCTTCCTCCCCAAAGCCCTGCTTTCTGTTTAAAGAGCTATGTAGTTCTGAAAACATTGATTCCCCCTGTccccacaactgcagaagggaccactttgcctgggctag i proCoq1.NW_012152163v1 I 141 I 1 s otoGar3.GL873522 1226127 112 + 48283576 AAAAGATAGGAAG-----------TTTCTCTTTTCTCCTTCCCAAAGCCCCAATTTTTGTATAAAAAGCTATGC----------------ATTCCTCCTGTCTCCACTACTCCAGAAGGGACTACTGTGTCTGGACTAG i otoGar3.GL873522 I 1 I 1 s canFam3.chr4 37169870 137 + 88276631 GGAAAATAGGAAATTCTAGTGACATTTCTCTTTTCTCCTTCTGAAGGC-CTGATTTCTCTTTAGAGGGCTATGTGACTCTGAACGCATTTACTCCACTCAGCCTTCTAACTCCAGAG-GGTCCTGATGGCCTGGGTGAG i canFam3.chr4 C 0 C 0 e mm10.chr13 65979384 6914 - 120421639 I e dasNov3.JH562710 245691 6502 - 960158 I a score=765088.000000 s hg38.chr5_KI270795v1_alt 39968 72 + 131892 -gcactcagcacattccatttccccactgcagaaactgcccaagatgggcagttatcaaggctagtccaatca s panTro5.chr5 5288523 72 - 181907262 -gcactcagcacattccatttccccactgcagaaactgcccaagatgggcagttatcaaggctagtccaatca i panTro5.chr5 C 0 C 0 s panPan2.chr5 5550896 72 - 183735486 -gcactcagcacattccatttccccactgcagaaactgcccaagatgggcagttatcaaggctagtccaatca i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1682679 72 + 3967317 -gcactcagcacattccatttccccactgcagaaactgcccaagatgggcagttatcaaggctagtccaatca i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4507152 72 + 163208435 -GCACTCAGCACGTTCTATTTCTCCACTGCAGAAACTGCCCAATATGGGCAGTTATTAAGGCTAGTCCAATCA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5739778 72 - 180051392 -GCATTCAGCACATCCCATTTCCCCACTGCAGAAACTGCCCAAGATGGACAGTTACCCAGGCTAGTCCCATCA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5925587 72 - 181584905 -GCACTCAGCACATCCCATTTCCCCACTGCAGAAACTGCCCAAGATGGACAGTTACCCAGGCTAGTCCCATCA i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 954651 72 - 16193990 -GCACTCAGCACATCCCATTTCCCCACTGCAGAAACTGCCCAAGATGGACAGTTACCCAGGCTAGTCCAATCA i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1777629 72 - 21434487 -gcactcagcacatcccatttccccactgcagaaactgcccaagatgggcagttacccaggctagtccaatca i cerAty1.NW_012007035v1 C 0 C 0 s manLeu1.NW_012103943v1 235891 72 + 2521317 -gcactcagcacatcccatttccccactgcagaaactgcccaagatgggcagttacccaggctagtccaatca i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1727154 72 - 2415367 -GCACTCAGCACATCCCATTTCCCCACTGCAGAAACTGCCCAGGATTGGCAGTTACCCAGGCTAGTCCAATCA i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64069094 72 + 204313951 -gcgtgcagcacattccgtttccccgctgcagaaactgcctaagatgggcagttaccaaggctggtccaatca i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2197253 72 + 10068113 -gcgtgcagcacattccgtttcccggctgcagaaactgcccgagatgggcagttaccaaggctggtccaatca i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 52273 72 - 709587 -gcgtgcagcacattccatttccccgctgcagaaactgcccaagatgggcagttaccaaggctggtccaatca i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1153189 72 - 2246441 -gcgtgcagcacattccgtttccccgctgcagaaactgcccaagatgggcagttaccaaggctggtccaatca i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 758166 69 - 940639 -ccactcagcacattccatccacccactatagaaactgcctggg--gggcag-taccaaagctggtccattca i proCoq1.NW_012152163v1 I 1 C 0 s otoGar3.GL873522 1226240 69 + 48283576 -ACACACTGCACATTCTATCCATCTCCTATAGGAACTGCCAGAG--GGTCAG-TACCAAAGCGGATTCAATCA i otoGar3.GL873522 I 1 C 0 s canFam3.chr4 37170007 72 + 88276631 GCCGTGCAGCATGTTCCCTTCCCCTATCACAGAAATCACCAGAGATAGGCAA-TAGTGAAGCTGGTCCAGtca i canFam3.chr4 C 0 I 847 e mm10.chr13 65979384 6914 - 120421639 I e dasNov3.JH562710 245691 6502 - 960158 I e chlSab2.chr23 4740933 0 - 82825804 C a score=557224.000000 s hg38.chr5_KI270795v1_alt 40040 55 + 131892 gagtgaattaaagacttgtactgaatgctgaagtgcagtgtctctttcctgttgg s panTro5.chr5 5288595 55 - 181907262 gagtgaattaaagacttgtactgaatgctgaagtgcagtgtctctttcctgttgg i panTro5.chr5 C 0 C 0 s panPan2.chr5 5550968 55 - 183735486 gagtgaattaaagacttgtactgaatgctgaagtgcagtgtctctttcctgttgg i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1682751 55 + 3967317 gagtgaattaaagacttgtactgaatgctgaagtgcagtgtctctttcctgttgg i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4507224 55 + 163208435 GAGTGAATTAAAGACTCGTACTGAATGCTGAAGTGCAGTGTCTCTTTCCTGTTGG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5739850 53 - 180051392 GAGTGAATTAAAGACTTGTACTGAACGCTGAAGTGCAGTGTCTA--TCCTGTTGG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5925659 53 - 181584905 GAGTGAATTAAAGACTTGTACTGAACGCTGAAGTGCAGTGTCTA--TCCTGTTGG i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 954723 53 - 16193990 GAGTGAATTAAAGACTTGTACTGAATGCTGAAGTGCAGTGTCTC--TCCTGTTGG i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1777701 53 - 21434487 gagtGAATTAAAGACTTGTACTAAATGCTGAAGTGCAGTGTCTC--TCCTGTTGG i cerAty1.NW_012007035v1 C 0 C 0 s manLeu1.NW_012103943v1 235963 53 + 2521317 gagtGAATTAAAGACTTGTACTAAATGCTGAAGTACAGTGTCTC--TCCTGTTGG i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1727226 55 - 2415367 GAGTGAATTAAAGACTTGTACTGAATGCTGAAGTGCAGTGTCTCTTTCCTGTTGG i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64069166 55 + 204313951 gagtGGATTAAAGACTTGTACTGAATGCTGAGGTCCAGTGTCACTTTCCTGTTGG i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2197325 55 + 10068113 gagtGAATTAAAGACTTGTACTGAATGCTGAGGTGCAGTGTCTCTTTCCTGTTGG i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 52345 55 - 709587 gagtGAATTAAAGACTTGTACTGAATGCTGAGGTGCAGTGTCTCTTTCCTGTTGG i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1153261 55 - 2246441 gagtGAATTAAAGACTTGTACTGAATGCTGAGGTGCAGTGTCTCTTTCCTGTTGG i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 758235 55 - 940639 gaatgaattaaagacttttactgaaTGCAGGGATGTAGTTTCTCTTTCCTATTGG i proCoq1.NW_012152163v1 C 0 I 91 s otoGar3.GL873522 1226309 41 + 48283576 GGGTGTATTAAAGGCTTTTACTGAATGCGGGCATGTAGTTT-------------- i otoGar3.GL873522 C 0 C 0 e mm10.chr13 65979384 6914 - 120421639 I e canFam3.chr4 37170079 847 + 88276631 I e dasNov3.JH562710 245691 6502 - 960158 I e chlSab2.chr23 4740933 0 - 82825804 C a score=830695.000000 s hg38.chr5_KI270795v1_alt 40095 120 + 131892 ATGAGAACCAACCAGGAAGCATGCAACTACCCTGTGAGCTTCCATTTTGGGACCAGCAGGCAAGCCAGTCTTGGAATAAGTTTGATCC----TTT--------------------TTTTTTTTTT--------AATGTA-TGTATGTATGTAt----------------------- s panTro5.chr5 5288650 124 - 181907262 ATGAGAACCAACCAGGAAGCATGCAACTACCCTGTGAGCTTCCATTTTGGGACCAGCAGGCAAGCCAGTCTTGGAATAAGTTTGATCC----TTT--------------------TTTTTTTTTT----TTTAAATGTA-TGTATGTATGTAt----------------------- i panTro5.chr5 C 0 C 0 s panPan2.chr5 5551023 124 - 183735486 ATGAGAACCAACCAGGAAGCATGCAACTACCCTGTGAGCTTCCATTTTGGGACCAGCAGGCAAGCCAGTCTTGGAATAAGTTTGATCC----TTT--------------------TTTTTTTTTA----Aatgtatgta-tgtatgtatgtat----------------------- i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1682806 120 + 3967317 ATGAGAACCAACCAGGAAGCATGCAACTACCCTGTGAGCTTCCATTTTGGGACCAGCAGGCAAGCCAGTCTTGGAATAAGTTTGATCC----TTT--------------------TTTTTTTTTA--------AATGTA-TGTATGTATGTAt----------------------- i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4507279 128 + 163208435 ATGAGAACCAACCAGGACGCATGCAGCTACCCAGTAAGCTTCCATTTTGGGACCAGCAGGCAAGACAGTCTTGGAATAAGTTTGATCC----ttt--------------------ttttttttttaatgtatgtatgta-tgtatgtatgtat----------------------- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5739903 122 - 180051392 ATGAG----AACCAGGAAGCATGCAGCTACCCAGTGAGCTTCAGTTTTGGGACCAGCAGGCAAGCCAGTCTTGGAATAAGTTTGAttcttttttt--------------------tttttttttt-------aaatgaagtgtatgtttgtat----------------------- i rheMac8.chr6 C 0 I 32 s macFas5.chr6 5925712 122 - 181584905 ATGAG----AACCAGGAAGCATGCAGCTACCCAGTGAGCTTCAGTTTTGGGACCAGCAGGCAAGCCAGTCTTGGAATAAGTTTGAttcttttttt--------------------tttttttttt-------AAATGAAGTGTGtgtatgtat----------------------- i macFas5.chr6 C 0 M 885 s macNem1.NW_012018466v1 954776 120 - 16193990 ATGAG----AACCAGGAAGCATGCAGCTACCCAGTGAGCTTCAGTTTTGGGACCAGCAGGCAAGCCAGTCTTGGAATAAGTTTGATTC--TTTTT--------------------TTTTTTTTTT-------AAATGAAGTGTATGTATGTAT----------------------- i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1777754 118 - 21434487 ATGAG----AACCGGGAAGCATGCAGCTACCCAGTGAGCTTCAGTTTTGGGACCAGCAGGCAAGCCAGTCTTGGAATAAGTTTGAttc----ttt--------------------tttttttttt-------aaatgaagtgtgtgtatgtat----------------------- i cerAty1.NW_012007035v1 C 0 I 28 s manLeu1.NW_012103943v1 236016 119 + 2521317 ATGAG----AACCAGGAAGCATGCAGCTACCCAGTGAGCTTCAGTTTTGGGACCAGCAGGCAAGCCAGTCTTGGAATAAGTTTGAttc---tttt--------------------tttttttttt-------aaatgaagtgtatgtatgtat----------------------- i manLeu1.NW_012103943v1 C 0 I 8 s colAng1.NW_012115755v1 1727281 118 - 2415367 ATGAG----AACCAGGAAGCATGCAGCTACCCAGTGAGCTTCAGTTTTGGGACCAGCAGGCAAGCCAGTCTTGGAATAAGTTTGAttc----ttt--------------------tttttttttt-------taataaagtgtatgtatgtat----------------------- i colAng1.NW_012115755v1 C 0 I 16 s calJac3.chr2 64069221 124 + 204313951 ATGAG----AACCAGAAAGCATGCAGCTACCCAGTGAGCCTCCATTTTGGGACGAGCAAGCAAGCCAGTCTTAGAATAAGTTTGAGTC----ttt--------------------tttttttttaatagtttgtattta-tttatttatttat----------------------- i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2197380 128 + 10068113 ATGAG----AACCAGGAAGCATGCAGCTACCCAGTGAGCTTCCATTTTGGGACCAGCAAGCAAGCCAGTCTTGGAATAAGTTTGAttc----ttt----------------tttatttttttttaatagtttgtattta-tttatttatttat----------------------- i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 52400 140 - 709587 ATGAG----AACAAGGAAGCATGCAGCTACCCAGTGAGCTTCCATTTTGGGACCAGCAAGCAAGCCAATCTTGGAATAAGTTTGAttc----ttttctttctttctttcttttttttttttttAAATAGTTTG----TA-tttatttatttat----------------------- i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1153316 106 - 2246441 ATGAG----AACCAGGAAGCATGCAGCTACCCAGTGAGCTTCCATTTTGGGACCAGCAAGCAAGCCAGTCTTAGAATAGtttgtattt----att--------------------------------------tattta-tttgtttatttat----------------------- i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1226350 134 + 48283576 ---------AAATAAGAAGTATGTACATAGTAAGAAAGCATCCACTTTGGGATCAGCA--------AGTCTTGAAGTGAGGTTGATTc----ttt--------------------tttctcctttcctttcctttcctt-ttcctttccttttcctttccttttcctttcctttcc i otoGar3.GL873522 C 0 C 0 e mm10.chr13 65979384 6914 - 120421639 I e canFam3.chr4 37170079 847 + 88276631 I e proCoq1.NW_012152163v1 758290 91 - 940639 I e dasNov3.JH562710 245691 6502 - 960158 I e chlSab2.chr23 4740933 0 - 82825804 C a score=531468.000000 s hg38.chr5_KI270795v1_alt 40215 71 + 131892 tttttgagatggagtttcactctgtcacccaggctgtagggcaatggtgagatcttggctcactgcaacct s panTro5.chr5 5288774 71 - 181907262 tttttgagatggagtttcactctgtcacccaggctgtagggcaatggtgagatcttggctcactgcaacct i panTro5.chr5 C 0 C 0 s panPan2.chr5 5551147 71 - 183735486 tttttgagatggagtttcactctgtcacccaggctgtagggcaatggtgagatcttggctcactgcaacct i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1682926 71 + 3967317 ttttcgagatggagtttcactctgtcacccaggctgtagggcaatggtgagatcttggctcactgcaacct i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4507407 71 + 163208435 tttttgagatggagtttcactctgtcacccaggctgtagggcaatggtgagatcttggctcactgcaacct i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5740057 71 - 180051392 gtattgagatggagtttcacttggtcgcccaggctgtagggcaatggtgagatcttggctcactgcaaact i rheMac8.chr6 I 32 C 0 s macNem1.NW_012018466v1 954896 71 - 16193990 GTAttgagatggagtttcacttggtcgcccaggctgtagggcaatggtgagatcttggctcactgcaaact i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1777900 71 - 21434487 gtattgagatggagtttcacttggtcgcccaggctgtagggcaatggtgagatcttggctcactgcaaact i cerAty1.NW_012007035v1 I 28 C 0 s manLeu1.NW_012103943v1 236143 71 + 2521317 gtattgagatggagtttcacttggtcgcccaggctgtagagcaatggtgagatcttggctcactgcaaact i manLeu1.NW_012103943v1 I 8 C 0 s colAng1.NW_012115755v1 1727415 71 - 2415367 gtattgagatggagtttcacttggtcgcccaggctgtagggcaatggtgagatcttggctcactgcaaact i colAng1.NW_012115755v1 I 16 C 0 s calJac3.chr2 64069345 71 + 204313951 tttttaagatggagcttcactctgtgtaccaggctggagggcaatggtgtgatcttggttcactgcaacct i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2197508 71 + 10068113 ttttaaagatggagcttcgctctgttgcccaggctggagggcaatggtgtgatctcggttcactgcaacct i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 52540 71 - 709587 tttttaagatggagcttcgctctgttgcccaggctggagagcaatggtgtgatcttggttcactgcaacct i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1153422 71 - 2246441 tttttaagatggagctttgctctgttgcccaggctggagggcaatggtgtgatcttggttcactgcaaact i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1226484 64 + 48283576 ttttttggagacagt----ctctatcaccctgggtagagtgctgtggt---atcatagctcacagcaacct i otoGar3.GL873522 C 0 C 0 e mm10.chr13 65979384 6914 - 120421639 I e macFas5.chr6 5925834 885 - 181584905 M e canFam3.chr4 37170079 847 + 88276631 I e proCoq1.NW_012152163v1 758290 91 - 940639 I e dasNov3.JH562710 245691 6502 - 960158 I e chlSab2.chr23 4740933 0 - 82825804 C a score=880043.000000 s hg38.chr5_KI270795v1_alt 40286 87 + 131892 ctgccacctgggttcaagctattctcctgcctcagcctcccgagtagctgggattacaggctcccgccaccactcctggctaa-tttt s panTro5.chr5 5288845 87 - 181907262 ctgccacctgggttcaagcttttctcctgcctcagccttccgagtagctgggattacaggctcctgccaccactcctggctaa-tttt i panTro5.chr5 C 0 C 0 s panPan2.chr5 5551218 87 - 183735486 ctgccacctgggttcaagcttttctcctgcctcagccttccgagtagctgggattacaggctcctgccaccactcctggctaa-tttt i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1682997 87 + 3967317 ctgccacctgggttcaagctattctcctgcctcagcctcccgagtagctgggactacaggctcccaccaccactcctggctaa-tttt i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4507478 87 + 163208435 ttgccacctgggttcaagctattctcctgcctcagcctcccaagtagctgggattacaggctcctaccaccactcctggctaa-tttt i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5740128 87 - 180051392 ctgcctcctgggttcaagctattctcctgcctcagcctcccaagtagctgggattacaggctcctgccaccactcctagctaa-tttt i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5926750 87 - 181584905 ctgcctcctgggttcaagctattctcctgcctcagcctcccaagtagctgggattacaggctcctgccaccactcctagctaa-tttt i macFas5.chr6 M 885 C 0 s macNem1.NW_012018466v1 954967 87 - 16193990 ctgcctcctgggttcaagttattctcctgcctcagcctcccaagtagctgggattacaggctcctgccaccactcctagctaa-tttt i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1777971 87 - 21434487 ctgcctcctgggttcaagctattctcctgcctcagcctcccaagtagctgggattacaggctcctgccaccactcctagctaa-tttt i cerAty1.NW_012007035v1 C 0 C 0 s manLeu1.NW_012103943v1 236214 87 + 2521317 ctgcctcctgggttcaagctattctcctgcctcagcctcccaagtagctgggattacaggctcctgccaccactcctagctaa-tttt i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1727486 87 - 2415367 ctgcctcctgggttgaagctattctcctgcctcagcctcccaagtagctgggattacaggctcctgccaccactcctagctaa-tttt i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64069416 88 + 204313951 ttgcctcctgggttcaagctattctcttgcctcagcctcccaagtagctgggattacaggctcccgccaccactcctggctaattttt i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2197579 87 + 10068113 ctgcctcctgggttcaagctattctcttgcctcagcctcccaagcagctgggattacaggctcccgccaccactcctggctga-tttt i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 52611 87 - 709587 ctgccccctgggttcaagcagttctcttgcctcagcctcccaagtagctgggattacaggctcccgccaccactcctggctga-tttt i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1153493 87 - 2246441 ctgcctcctgggttcaagctattctcttgcctcagcctcccaagtagctgggattacaggctcccgccaccactcctggctga-tttt i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1226548 87 + 48283576 caaacccttgggctcaagcaattctcttgcctcagcctcccaagtagctggaactacaggcgcccaccacagtgcctggcaga-tttt i otoGar3.GL873522 C 0 C 0 e mm10.chr13 65979384 6914 - 120421639 I e canFam3.chr4 37170079 847 + 88276631 I e proCoq1.NW_012152163v1 758290 91 - 940639 I e dasNov3.JH562710 245691 6502 - 960158 I e chlSab2.chr23 4740933 0 - 82825804 C a score=135968.000000 s hg38.chr5_KI270795v1_alt 40373 14 + 131892 tgtatttttagtgg s panTro5.chr5 5288932 14 - 181907262 tgtatttttagtgg i panTro5.chr5 C 0 C 0 s panPan2.chr5 5551305 14 - 183735486 tgtatttttagtgg i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1683084 14 + 3967317 tgtatttttagtgg i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4507565 14 + 163208435 tgtatttttattgg i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5740215 14 - 180051392 tgtatttttagtag i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5926837 14 - 181584905 tgtatttttagtag i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 955054 14 - 16193990 tgtatttttagtag i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1778058 14 - 21434487 tgtatttttagtag i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4740933 14 - 82825804 tgtatttttagtag i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 236301 14 + 2521317 tgtatttttagtag i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1727573 14 - 2415367 tgtatttttagtag i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64069504 14 + 204313951 tgcatttttagttg i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2197666 14 + 10068113 tgcatttttagtag i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 52698 14 - 709587 tgcatttttagtag i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1153580 14 - 2246441 tacatttttagtag i aotNan1.NW_018501968v1 C 0 C 0 e mm10.chr13 65979384 6914 - 120421639 I e otoGar3.GL873522 1226635 0 + 48283576 C e canFam3.chr4 37170079 847 + 88276631 I e proCoq1.NW_012152163v1 758290 91 - 940639 I e dasNov3.JH562710 245691 6502 - 960158 I a score=147202.000000 s hg38.chr5_KI270795v1_alt 40387 18 + 131892 agatggggttttgccatg s panTro5.chr5 5288946 18 - 181907262 agatggggttttgccgtg i panTro5.chr5 C 0 C 0 s panPan2.chr5 5551319 18 - 183735486 agatggggttttgccatg i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1683098 18 + 3967317 agatggggttttgccatg i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4507579 18 + 163208435 agacggggttttgccatg i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5740229 18 - 180051392 aaacggggttttgccatg i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5926851 18 - 181584905 aaacggggttttgccatg i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 955068 18 - 16193990 aaacggggttttgccatg i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1778072 18 - 21434487 aaacggggttttgccatg i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4740947 18 - 82825804 aaacggggttttgccacg i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 236315 18 + 2521317 aaacggggttttgccatg i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1727587 18 - 2415367 aaacggggttttgccatg i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64069518 18 + 204313951 agacaatgtttcgccatg i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2197680 18 + 10068113 agacaaggtttcgccatg i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 52712 18 - 709587 agacaagattttgccatg i cebCap1.NW_016107999v1 C 0 C 0 e mm10.chr13 65979384 6914 - 120421639 I e otoGar3.GL873522 1226635 0 + 48283576 C e canFam3.chr4 37170079 847 + 88276631 I e proCoq1.NW_012152163v1 758290 91 - 940639 I e dasNov3.JH562710 245691 6502 - 960158 I e aotNan1.NW_018501968v1 1153594 0 - 2246441 C a score=208267.000000 s hg38.chr5_KI270795v1_alt 40405 32 + 131892 ttgggcaggctggtcttgaactcctgacctca s panTro5.chr5 5288964 32 - 181907262 ttgggcaggctggtctcgaactcctgacctca i panTro5.chr5 C 0 C 0 s panPan2.chr5 5551337 26 - 183735486 ttgggcaggctggtctcgaactcctg------ i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1683116 32 + 3967317 ttgggcaggctggtctcgaactcctgacctca i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4507597 32 + 163208435 ttgggaaggctggtctcgaactcctgacctca i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5740247 32 - 180051392 ttgggcaggctggcctcaaactcctgacctca i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5926869 32 - 181584905 ttgggcaggctggcctcaaactcctgacctca i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 955086 32 - 16193990 ttgggcaggctggcctcaaactcctgacctca i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1778090 32 - 21434487 ttgggcaggctggtctcaaactcctgacctca i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4740965 32 - 82825804 ttgggcaggctggtctcgaactcctgacctca i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 236333 32 + 2521317 ttgggcaggctggtctcaaactcctgacctca i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1727605 32 - 2415367 ttgggcaggctggtctcgaactcctgacctca i colAng1.NW_012115755v1 C 0 C 0 s cebCap1.NW_016107999v1 52730 32 - 709587 ttggccaggctgttctcgaactcctgacctca i cebCap1.NW_016107999v1 C 0 C 0 e saiBol1.JH378186 2197698 0 + 10068113 C e mm10.chr13 65979384 6914 - 120421639 I e calJac3.chr2 64069536 0 + 204313951 C e otoGar3.GL873522 1226635 0 + 48283576 C e canFam3.chr4 37170079 847 + 88276631 I e proCoq1.NW_012152163v1 758290 91 - 940639 I e dasNov3.JH562710 245691 6502 - 960158 I e aotNan1.NW_018501968v1 1153594 0 - 2246441 C a score=1250920.000000 s hg38.chr5_KI270795v1_alt 40437 257 + 131892 catgatccactcgccttggcctcccaaagtgattacaggcgtgagccaccttcgcctggccTGA----GA--------------------TTG--------------A-----tttttttttttttttttttgagatggagtctcgctctatcgcccaggcaggagtgcagtggtgcaatctcaactcactgcaacctccgcctttggggttcaagtgattcttctgcctcagcctcctgagtagctgggactacaggcacgcaccaccatgcccggctaatttttgtatttttagtaga s panTro5.chr5 5288996 259 - 181907262 catgatccactcgccttggcctcccaaagtgattacaggcgtgagccaccctcgcctggccTGA----GA--------------------TTG--------------A---tttttttttttttttttttttgagacggagtctcgctctgtcgcccaggcaggagtgcagtggtgcaatctcaactcactgcagcctccgcctttggggttcaagtgattcttctgcctcagcctcctgagtagctgggactacaggcacgcaccaccatgcccggctaatttttgtatttttagtaga i panTro5.chr5 C 0 C 0 s panPan2.chr5 5551363 208 - 183735486 ----------------------------------------------------------------------NNNNNNNNNNNNNNNNNNNNTTG--------------A-----tttttttttttttttgt---agacggagtcttgctctgtcgcccaggcaggagtgcagtggtgcaatctcaactcactgcagcctccgcctttggggttcaagtgattcttctgcctcagcctcctgagtagctgggactacaggcacgcaccaccatgcccggctaatttttgtatttttagtaga i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1683148 257 + 3967317 catgatccactcgccttggcctcccaaagtgattacaggcgtgagccaccttcgcctggccTGA----GA--------------------TTG--------------A-----tttttttttttttttttttgagacggggtctcgctctgtcgcccaggcaggagtgcagtggtgcaatctcagctcactgcaacctccgcctttggggttcaagtgattcttctgcctcagcctcctgagtagctgggactacaggcacgcaccaccatgcccggctaatttttgtatttttagtaga i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4507629 250 + 163208435 catgatccacccgccttggcctcccaaagtgattacaggcttgagccaccttcgcctggccTGA----GA--------------------TTG--------------A-----tttttttttttt-------gagatggaatcttgctctgtcgcccaggcaggagtgcagtggtgcaatctcaactcactgcaacctccaccttcggggttcaagtgattcttctgcctcagcctcctgagtagctgggactacaggcacgcaccaccatgccagcctaatttttgtatttttagtaga i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5740279 260 - 180051392 tgtgatccacctgccttggcctcccaaagtgattataggcgtgagccacc-tcgcctggccTGAGATTGA--------------------TTG--------------A-----tttttttttttttttttttgagatggagtcttgctctgttgcccaggctggagtgcagtggcgtgatctctgctcactgcaacctccgccttcagggttcaagtgattcttctgcctcagcctccctagtagctaggactacaggcacgcaccaccacacccagctaatttttgtatttttagtaga i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5926901 260 - 181584905 tgtgatccacctgccttggcctcccaaagtgattataggcgtaagccacc-tcgcctggccTGAGATTGA--------------------TTG--------------A-----tttttttttttttttttttgagatggagtcttgctctgttgcccaggctggagtgcagtggtgtgatctctgctcactgcaacctccgccttcagggttcaagtgattcttctgcctcagcctccctagtagctaggactacaggcacgcaccaccacacccagctaatttttgtatttttagtaga i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 955118 256 - 16193990 tgtgatccacctgccttggcctcccaaagtgattataggcgtgagccacc-tcgcctggccTGAGATTGA--------------------TTG--------------A---------tttttttttttttttgagatggagtcttgctctgttgcccaggctggagtgcagtggcgtgatctctgctcactgcaacctccgccttcagggttcaagtgattcttctgcctcagcctccctagtagctaggactacaggcacgcaccaccacacccagctaatttttgtatttttagtaga i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1778122 260 - 21434487 tgtgatccacctgccttggcctcccaaagtgattataggcgtgagccacc-tcgcctggccTGAGATTGA--------------------TTG--------------A-----tttttttttttttttttttgagatggagtcttgctctgttgcccaggctggagtgcagtggcgtgatctctgctcactgcaacctccgccttcggggttcaagtgattcttctgcctcagcctccctagtagctaggactacaggcacgcaccaccacacccagctaatttttgtatttttagtaga i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4740997 279 - 82825804 tgtgatccacccgccttggcctcccaaagtgattataggcgtgagccacc-tcgcctggccTGAGATTGA--------------------TTGtttttttttttttttttttttttttttttttttttttttgagacagagtcttgctctgtcgcccaggctggagtgcagtggcgtgatctctgctcactgcaacctctgccttcagggttcaagtgattcttctgcctcagcctcccaactagctgggactacaggcacgcaccaccacacccagctaatttttgtatttttagtaga i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 236365 265 + 2521317 tgtgatccacctgccttggcctcccaaagtgattataggcgtgagccacc-tcgcctggccTGAGATTGA--------------------TTG--------------Attttttttttttttttttttttttgagatggagtcttgctctgtttcccaggctggagtgcagtggcgtgatctctgctcactgcaacctccgccttcggggttcaagtgattcttctgcctcagcctccctagtagctaggactacaggcacccaccaccacacccagctaatttttgtatttttagtaga i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1727637 257 - 2415367 tgtgatccacctgccttggcctcccaaagtgattataggcatgagccacc-ttgcctggccTGAGATTGA--------------------TTG--------------A--------Ctttttttttttttttgagatggagtcttgctctgttgcccaggttggagtgcagtggtgtgatctctgttcactgcaacctctgccttcggggttcaagtgaattttctgcctcagcctcccaagtagctgggactataggcatgcaccaccacgcccagctaatttttgtatttttagtaga i colAng1.NW_012115755v1 C 0 C 0 s otoGar3.GL873522 1226635 128 + 48283576 -----------------------------------------------------------------attag--------------------cat--------------a-----tatttttttcttttttt-------gcagtttt------tggccagggctg---------ggtttgaac--------ctgccacctccagcatatggggccag----------tgccttacttctttgag---------ccacagg-------cgccacTGCTGGCTGAttt------------taga i otoGar3.GL873522 C 0 C 0 e cebCap1.NW_016107999v1 52762 0 - 709587 C e saiBol1.JH378186 2197698 0 + 10068113 C e mm10.chr13 65979384 6914 - 120421639 I e calJac3.chr2 64069536 0 + 204313951 C e canFam3.chr4 37170079 847 + 88276631 I e proCoq1.NW_012152163v1 758290 91 - 940639 I e dasNov3.JH562710 245691 6502 - 960158 I e aotNan1.NW_018501968v1 1153594 0 - 2246441 C a score=105763.000000 s hg38.chr5_KI270795v1_alt 40694 17 + 131892 gatagagtttcacccta s panTro5.chr5 5289255 17 - 181907262 gatagagtttcacccta i panTro5.chr5 C 0 C 0 s panPan2.chr5 5551571 17 - 183735486 gatagagtttcacccta i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1683405 17 + 3967317 gatagagtttcacccta i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4507879 17 + 163208435 gacggagtttcaccctg i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5740539 17 - 180051392 gatggagtttcaccata i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5927161 17 - 181584905 gatggagtttcaccata i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 955374 17 - 16193990 gatggagtttcaccata i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1778382 17 - 21434487 gatggagtttcgccata i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4741276 17 - 82825804 gacggagtttcaccata i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 236630 17 + 2521317 gatggagtttcaccgta i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1727894 17 - 2415367 gacggagtttcatcata i colAng1.NW_012115755v1 C 0 C 0 s aotNan1.NW_018501968v1 1153594 17 - 2246441 gacaagttttcaccatg i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1226763 17 + 48283576 gatggggtcttacttta i otoGar3.GL873522 C 0 C 0 e cebCap1.NW_016107999v1 52762 0 - 709587 C e saiBol1.JH378186 2197698 0 + 10068113 C e mm10.chr13 65979384 6914 - 120421639 I e calJac3.chr2 64069536 0 + 204313951 C e canFam3.chr4 37170079 847 + 88276631 I e proCoq1.NW_012152163v1 758290 91 - 940639 I e dasNov3.JH562710 245691 6502 - 960158 I a score=303344.000000 s hg38.chr5_KI270795v1_alt 40711 32 + 131892 ttggccaggctggtctcgaattcctgacctcc s panTro5.chr5 5289272 32 - 181907262 ttggccaggctggtctcgaattcctgacctcc i panTro5.chr5 C 0 C 0 s panPan2.chr5 5551588 32 - 183735486 ttggccaggctggtctcgaattcctgacctcc i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1683422 32 + 3967317 ttggccaggctggtctcgaattcctgacctcc i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4507896 32 + 163208435 ttggccaggccggtctcgaattcctgacctcc i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5740556 32 - 180051392 ttggccaggctggtctcgaattcctgacctcc i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5927178 32 - 181584905 ttggccaggctggtctggaattcctgacctcc i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 955391 32 - 16193990 ttggccaggctagtctcgaattcctgacctcc i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1778399 32 - 21434487 ttggccaggctggtctcgaattcctgacctcc i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4741293 32 - 82825804 ttggccaggctggtctcgaattcctgacctcc i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 236647 32 + 2521317 ttggccaggctggtctcgaattcctgacctcc i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1727911 32 - 2415367 ttgaccaggctggtctcgaattcctgacctcc i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64069536 32 + 204313951 ttggccaggctgttctcgaactcctgacctca i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2197698 32 + 10068113 ttggccaagctgttctcgaactcccgaactta i saiBol1.JH378186 C 0 C 0 s aotNan1.NW_018501968v1 1153611 32 - 2246441 ttggccaggctgttctcgaactcctgacctca i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1226780 29 + 48283576 ---ctcatgccagtcttgaactcctgagttca i otoGar3.GL873522 C 0 C 0 e cebCap1.NW_016107999v1 52762 0 - 709587 C e mm10.chr13 65979384 6914 - 120421639 I e canFam3.chr4 37170079 847 + 88276631 I e proCoq1.NW_012152163v1 758290 91 - 940639 I e dasNov3.JH562710 245691 6502 - 960158 I a score=788232.000000 s hg38.chr5_KI270795v1_alt 40743 83 + 131892 agtgatccgcctgctttggcctcccaaagtgctgggattacaggcatgagccactgcacccagc--cGAGAATGATTCTTAA-GAA s panTro5.chr5 5289304 84 - 181907262 agtgatccgcctgctttggcctcccaaagtgctgggattacaggcatgagccactgcacccagc--TGAGAATGATTCTTAAGGAA i panTro5.chr5 C 0 C 0 s panPan2.chr5 5551620 84 - 183735486 agtgatccgcctgctttggcctcccaaagtgctgggattacaggcatgagccactgcacccagc--TGAGAATGATTCTTAAGGAA i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1683454 84 + 3967317 agtgatccgcctgctttggcctcccaaagtgctgggattacaggcatgagccactgcacccagc--cGAGAATGATTCTTAAGGAA i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4507928 84 + 163208435 agtgatccgcctgccttggcctcccaaagtgctgggattacaggcgtgagccactgcacccagc--TGAGAATGATTCTTGAGGAA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5740588 83 - 180051392 agtgatctgcccaccttggcctcccaaagtgctgggattataggtgtgagccaccgcacccagc---AAGATTGATTCTTAAGAAA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5927210 83 - 181584905 agtgatctgcccaccttggcctcccaaagtgctgggattataggtgtgagccaccgcacccagc---AAGATTGATTCTTAAGAAA i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 955423 83 - 16193990 agtgatctgcccaccttggcctcccaaagtgctgggattataggtgtgagccaccgcacccagc---AAGATTGATTCTTAAGAAA i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1778431 83 - 21434487 agtgatctgcccacctcggcctcccaaaatgctgggattataggtgtgagccaccgcacccagc---AAGATTGATTCTTAAGAAA i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4741325 83 - 82825804 agtgatctgcccacctcggcctcccaaagtgctgggattacaggcatgagcctccacacccagc---AAGATTGATTCTTAAGAAA i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 236679 83 + 2521317 agtgatctgcccacctcggcctcccaaagtgctgggattataggtgtgagccaccgcacccagc---AAGATTGATTCTTAAGAAA i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1727943 83 - 2415367 agtgatctgcccaccttggcctcccaaagtgctgggattacaggtgtgagccaccgcacccagc---AAGATTGATTCTTAAGAAA i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64069568 85 + 204313951 ggtgatccacctgtctcggcctcccaaagtgctaggattacagacgtgagccaccATACTAAGCC-TGAGATTGATTCTTAAGGAG i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2197730 85 + 10068113 ggtgatccacctgtctctgcctcccaaagtgaaaggattacagatgtgagccaccatacccagcc-TGAGATTGATTCTTAAGGAG i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 52762 85 - 709587 ggtgatccacctgtcttggcctcccaaagtgcaaggattacagatgtgagccaccatacccagcc-TGAGATTGATTCTTAAGGAG i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1153643 85 - 2246441 ggtgagccacctgtcttggcctcccaaagtgctaggattacagatgtcagccaccatacccagcc-TGAGATTGATTCTTAAGGAG i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1226809 86 + 48283576 ggcgatcctccagccatggcctcccagaatgttaggattacaggtgtgggccattgcccctggccAACAGGTTGATTCTTGAAAAG i otoGar3.GL873522 C 0 C 0 e mm10.chr13 65979384 6914 - 120421639 I e canFam3.chr4 37170079 847 + 88276631 I e proCoq1.NW_012152163v1 758290 91 - 940639 I e dasNov3.JH562710 245691 6502 - 960158 I a score=651148.000000 s hg38.chr5_KI270795v1_alt 40826 62 + 131892 GAGAGACAAGCAGAGATTCTGGGTCTAGCTAGTTGACCACTTCTTCCCTGAAGCCCATCCTA s panTro5.chr5 5289388 62 - 181907262 GAGAGACAAGCAGAGATTCTGGGTCTAGCTAGTTGACCACTTCTTCCCTGAAGCCCATCCTA i panTro5.chr5 C 0 C 0 s panPan2.chr5 5551704 62 - 183735486 GAGAGACAAGCAGAGATTCTGGGTCTAGCTAGTTGACCACTTCTTCCCTGAAGCCCATCCTA i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1683538 62 + 3967317 GAGAGACAAGCAGAGATTCTGGGTCTAGCTAGTGGACCACTTCTTCCCTGAAGCCCATCCTA i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4508012 62 + 163208435 GAGAGACAAGCAGAGATTCTGGGTCTAGCTAGTTGACCACTTCTTCCCTGAAGCCCATCCTA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5740671 54 - 180051392 GAGAGACAAGCAGAGATTCTGGGTCTAGCTAG--------TTCTTTCCTGAAGCCCATCCTA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5927293 54 - 181584905 GAGAGACAAGCAGAGATTCTGGGTCTAGCTAG--------TTCTTCCCTGAAGCCCATCCTA i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 955506 54 - 16193990 GAGAGACAAGCAGAGATTCTGGGTCTAGCTAG--------TTCTTCCCTGAAGCCCATCCTA i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1778514 54 - 21434487 GAGAGACAAGCAGAGATTCTGGGTCTAGCTAG--------TTCTTCCCTGAAGCTCATCCTA i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4741408 54 - 82825804 GAGAGACAAGCAGAGATTCTGGGTCTAGCTAG--------TTCTTCCCTGAAGCCCATCCTA i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 236762 54 + 2521317 GAGAGACAAGCAGAGATTCTGGGTCTAGCTAG--------TTCTTCCCTGAAGCTCATCCTA i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1728026 54 - 2415367 GAGAGACAAGCAGAGATTCTGGGTCTAGCTAG--------TTCTTCCCTGAAGCCCATCCTA i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64069653 54 + 204313951 GAGACACAAGCAGAGGTCCTGAGTCTAGCCAG--------TTCTTCCGCAAAGCCCATCCTA i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2197815 54 + 10068113 GAGACACAAGCAGAGATCCTGGGTCTAGCCAG--------TTCTTTCCCAAAGTCCATCCTA i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 52847 54 - 709587 GAGACACAAGCAGAGATCCTGGGTCTAGCCAT--------TTCTTCCCCAAAGCCCATCCTA i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1153728 54 - 2246441 GAGATATAAGCAGAGATCCTGAGTCTAGCCAG--------TTCTTCCCCAAAGCCCACCCTA i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 758381 62 - 940639 GAGAGACAAGCAGAGGTTCCAGGTCTAGCTAGTAGATCAGTTCTTCCCTGAAGCCCATCCTA i proCoq1.NW_012152163v1 I 91 C 0 s otoGar3.GL873522 1226895 59 + 48283576 GAGACACAAGCAAAAGTTCTAGGTCTAGCTAGT---TCAGTTCTTCCCTGGAGCCCATCATA i otoGar3.GL873522 C 0 I 50 e mm10.chr13 65979384 6914 - 120421639 I e canFam3.chr4 37170079 847 + 88276631 I e dasNov3.JH562710 245691 6502 - 960158 I a score=57077.000000 s hg38.chr5_KI270795v1_alt 40888 5 + 131892 TCTCT s panTro5.chr5 5289450 5 - 181907262 TCTCT i panTro5.chr5 C 0 C 0 s panPan2.chr5 5551766 5 - 183735486 TCTCT i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1683600 5 + 3967317 TCTCT i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4508074 5 + 163208435 TCTCT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5740725 5 - 180051392 TCTCT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5927347 5 - 181584905 TCTCT i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 955560 5 - 16193990 TCTCT i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1778568 5 - 21434487 TCTCT i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4741462 5 - 82825804 TCTCT i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 236816 5 + 2521317 TCTCT i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1728080 5 - 2415367 TCTCT i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64069707 5 + 204313951 TCTGT i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2197869 5 + 10068113 CCTCT i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 52901 5 - 709587 TCTCT i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1153782 5 - 2246441 TCTCT i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 758443 5 - 940639 CCTCT i proCoq1.NW_012152163v1 C 0 I 6575 e mm10.chr13 65979384 6914 - 120421639 I e otoGar3.GL873522 1226954 50 + 48283576 I e canFam3.chr4 37170079 847 + 88276631 I e dasNov3.JH562710 245691 6502 - 960158 I a score=339558.000000 s hg38.chr5_KI270795v1_alt 40893 36 + 131892 GGCTCCTCCTGATACGGAAGTCATAAATCCCCTCTA s panTro5.chr5 5289455 36 - 181907262 GGCTCCTCCTGATACGGAAGTCATAAATCCCCTCTA i panTro5.chr5 C 0 C 0 s panPan2.chr5 5551771 36 - 183735486 GGCTCCTCCTGATACGGAAGTCATAAATCCCCTCTA i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1683605 36 + 3967317 GGCTCCTCCTGATACGGAAGTCATAAATCCCCTCTA i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4508079 36 + 163208435 AGCTCCTCCTGATACGGAAGTCATAAATCCCCTCTA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5740730 36 - 180051392 AGCTCCTCCTGATACGGGAGTCATGAATACCCTCTG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5927352 36 - 181584905 AGCTCCTCCTGATACGGGAGTCATGAATACCCTCTG i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 955565 36 - 16193990 AGCTCCTCCTGATACGGGAGTCATGAATACCCTCTG i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1778573 36 - 21434487 AGCTCCTCCTGATACGGGAGTCATGAATACCCTCTG i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4741467 36 - 82825804 AGCTCCTCCTGATACGGGAGTCATGAAAACCCTCTG i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 236821 36 + 2521317 AGCTCCTCCTGATACGGGAGTCATGAATACCCTCTG i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1728085 36 - 2415367 AGCTCCTCCTGATATGGGAGTCATGAATACCCTCTG i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64069712 36 + 204313951 AGCTCTTCCTTATATGGGAGTCATAAATCCCCTCTA i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2197874 36 + 10068113 AGCTCCTCCTTATTTGGGAGTCATAAATCCCCTCAA i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 52906 36 - 709587 AGCTCCTCCTTATATGGGAGTCATAAATCCCCTCTG i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1153787 36 - 2246441 AGCTTCTCCTTATATGGGAGTCATAAATCCCCTCTA i aotNan1.NW_018501968v1 C 0 C 0 e mm10.chr13 65979384 6914 - 120421639 I e otoGar3.GL873522 1226954 50 + 48283576 I e canFam3.chr4 37170079 847 + 88276631 I e proCoq1.NW_012152163v1 758448 6575 - 940639 I e dasNov3.JH562710 245691 6502 - 960158 I a score=1365583.000000 s hg38.chr5_KI270795v1_alt 40929 130 + 131892 TGGTCT-AAAATACAACCACAAGCCTCTCAGCTGACAAGTTAGTCTTGATGCTATTTGAATTCTGGTTCCAGTCAGCTGAAAAGCCAGGTCAATGGGATTTTCCCTCACCAGTGATTTGTTATATGAGTGA s panTro5.chr5 5289491 130 - 181907262 TGGTCT-AAAATACGACCACAGGCCTCTCAGCTGACAAGTTAGTCTTGATGCTATTTGAATTCTGGTTCCAGTCAGCTCAAAAGCCAGGTCCATGGGATTTTCCCTCACCGGTGATTTGTTATATGAGTGA i panTro5.chr5 C 0 C 0 s panPan2.chr5 5551807 130 - 183735486 TGGTCT-AAAATACGACCACAGGCCTCTCAGCTGACAAGTTAGTCTTGATGCTATTTGAATTCTGGTTCCAGTCAGCTCAAAAGCCAGGTCCATGGGATTTTCCCTCACCAGTGATTTGTTATATGAGTGA i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1683641 131 + 3967317 TGGTCTAAAAATACGACCACAAGCCTCTCAGCTGACAAGTTAGTCTTGATGCTATTTGAATTTTGGTTCCAGTCAGCTCAAAAGCCAGGTCCATGGGATTTTCCCTCACCAGTGATTTGTTATATGAGTGA i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4508115 130 + 163208435 TGGTCT-AAAATACGACCACAAGCCTCTCAACTGACAAATTAGTCTTGATACTATTTGAATTCTGGTTCCAGTTAGCTCAAAAGCCAGGTCCGTGGGATTTTCCCTCACCAGTGATTTGTTATATGAGTGA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5740766 130 - 180051392 TGGTCT-AAAATACGACCACAAGCCTCTCAACTGACCACTTAGTCTTGATGCTATTTGAATTCTGGTTCCAGTCAGCTCAAAAGCCAGGTCTATGGGATTTTCCCTCACCAGTTATTTGTTATATGAGTGA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5927388 130 - 181584905 TGGTCT-AAAATACGATCACAAGCCTCTCAACTGACCACTTAGTCTTGATGCTATTTGAATTCTGGTTCCAGTCAGCTCAAAAGCCAGGTCTATGGGATTTTCCCTCACCAGTTATTTGTTATATGAGTGA i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 955601 130 - 16193990 TGGTCT-AAAATACGACCACAAGCCTCTCAACTGACCACTTAGTCTTGATGCTATTTGAATTCTGGTTCCAGTCAGCTCAAAAGCCAGGTCTATGGGATTTTCCCTCACCAGTTATTTGTTATATGAGTGA i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1778609 130 - 21434487 TGGTCT-AAAATACGACCACAAGCCTTTCAACTGACGACTTAGTCTTGATGCTATTTGAATTCTGGTTCCAGTCAGCTCAAAAGCCAGGTCTATGGGATTTTCCCTCACCAGTTATTTGTTATATGAGTGA i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4741503 130 - 82825804 TGGTCT-AAAATACGACCACAAGCCTCTCAACTGACGAGTTAGTCTTGATGCTATTTGAATTCTGGTTCCAGTCAGCTCAAAAGCCAGGTCCATGGGATTTTCCCTCACCAGTGATTTGTTATATGAGTGA i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 236857 130 + 2521317 TGGTCT-AAAATACGACCACAAGCCTCTCAACTGACGACTTAGTGTTGATGCTATTTGAATTCTGGTTCCAGTCAGCTCAAAAGCCAGGTCTATGGGATTTTCTCTCACCAGTTTTTTGTTATATGAGTGA i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1728121 130 - 2415367 TGGTCT-AAAATACGACCACAAGCCTCTCAACTGACGACTTAGTCTTGATGCTATTTGAATTCTGGTTCCAGTCAGCTCAAAAACCAGGTCCATGGGATTTTCCCTCACCAGTGATTTGTTATATGAGTGA i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64069748 130 + 204313951 TGGTTT-AAAGTATAAACACAAGCCTCTCAACTGACAAGTTAGTCTTGATGCTATTTGAGTTCTGGATCTTGTCAGCTCAAAAGCCATGTCCATGGGTTTTTCCCTCACCAGTGATTTGTTATATGAGTGA i calJac3.chr2 C 0 I 9594 s saiBol1.JH378186 2197910 130 + 10068113 TGATTT-AAAGTATAAACACAAGTCTCTCAACTGACGAGTTAGTCTTGATGCTATTTGAGTTATGGGTCTTGTCAGCTCAAAAGCTATGTCCATGGGTTTTTCCCTCACCAGTGATTTGTTATATGAGTGA i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 52942 130 - 709587 TGGTTT-AAAGTATAAACACAAGCCTCTCAACTGATGAGTTAGTCTTGATGCTATTTGAGTTCTGGGTCTTGTCAGCTCAAAAGCCATGTCCATGAGTTTTTCCCTCACCAGTGATTTGTTATATGAGTGA i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1153823 130 - 2246441 TGGTTT-AAAGTATAAACACAATCTTCTCAACTGACGAGTTAGTCTTGATGCTATTTGAGTTCTGGGTCTTGTCAGCTCAAAAGCCATGTCCATGGGTTTTTCCCTCACCAGTGATTTGTTATATGAGCGA i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1227004 123 + 48283576 TAGTTC-AGGGAATAACCACAAGCTTCTCAACTAACTAG------TTGATGCTATTTGAGTCTTGGTTCCTGTCAGCTCAGAAGACAGTTCCATGGCTTCTTCCTTGGCCACCTTTTGGTTATATGAGTA- i otoGar3.GL873522 I 50 C 0 e mm10.chr13 65979384 6914 - 120421639 I e canFam3.chr4 37170079 847 + 88276631 I e proCoq1.NW_012152163v1 758448 6575 - 940639 I e dasNov3.JH562710 245691 6502 - 960158 I a score=534543.000000 s hg38.chr5_KI270795v1_alt 41059 62 + 131892 TTACACTCTTGTTTTTTCTTAAAAAATATATTTTTTAAATTTTAATGAAAACTTAGAGACAT s panTro5.chr5 5289621 62 - 181907262 TTACACTCTTGTTTTTTCTTAAAAAATATATTTTTTAAATTTTAATGAAAACTTAGAGACAT i panTro5.chr5 C 0 C 0 s panPan2.chr5 5551937 62 - 183735486 TTACACTCTTGTTTTTTCTTAAAAAATATATTTTTTAAATTTTAATGAAAACTTAGAGACAT i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1683772 62 + 3967317 TTACACTCTTGTTTTTTCTTAAAAAATATATTTTTTAAATTTTAATGAAAGCTTAGAGACAT i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4508245 62 + 163208435 TTACACTCCTGTTTTTTCTTAAAAAATATGTTTTTTAAATTTTAATGAAAACTTAGAGACAT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5740896 62 - 180051392 TTACACTCTTGTTTTTTCTTAAGAAATATATTTTTAAAATTTTAATGAAAACTTAGAAACAT i rheMac8.chr6 C 0 I 180 s macFas5.chr6 5927518 62 - 181584905 TTACACTCTTGTTTTTTCTTAAGAAATATATTTTTAAAATTTTAATGAAAACTTAGAAACAT i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 955731 62 - 16193990 TTACACTCTTGTTTTTTCTTAAGAAATATATTTTTAAAATTTTAATGAAAACTTAGAAACAT i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1778739 62 - 21434487 TTACACTCTTGTTTTTTCTTAAGAAATATATTTTTAAAATTTTAATGAAAACTTAGAAACAT i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4741633 62 - 82825804 TTACACTCTTGTTTTTTCTTAAGAAATATATTTTTAAAATTTTAATGAAAACTTAGAAACAT i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 236987 62 + 2521317 TTACACTCTTGTTTTTTCTTAAGAAATATATTTTTAAAATTTTAATGAAAACTTAGAAACAT i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1728251 62 - 2415367 TTACACTCTTGTTTTTTCTTAATAAATATATTTTTTAAATTTCAATGAAAACTTAAAAACAA i colAng1.NW_012115755v1 C 0 C 0 s saiBol1.JH378186 2198040 59 + 10068113 GTACACTCTTG-TTTTCCTTAAAAATTATATTTTAACAATTTTAGTGAAAACTTAGAAAC-- i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 53072 59 - 709587 TTACACTCTTG-TTTTTCTTAAAAAGTATATTTTAACAATTTTAATGAAAACTTAGAAAC-- i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1153953 59 - 2246441 TTACACTCTTG-TTTTTCTTAAAAAGTATATTTTAACAATTTTAATGAAAACTTAGAAAC-- i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1227127 54 + 48283576 --------TGTTTTTTCCTTCaaaaatatattttaaaaaaattaatgaaaacttaaaaacat i otoGar3.GL873522 C 0 C 0 e mm10.chr13 65979384 6914 - 120421639 I e calJac3.chr2 64069878 9594 + 204313951 I e canFam3.chr4 37170079 847 + 88276631 I e proCoq1.NW_012152163v1 758448 6575 - 940639 I e dasNov3.JH562710 245691 6502 - 960158 I a score=104190.000000 s hg38.chr5_KI270795v1_alt 41121 13 + 131892 ATACAAAAGTAGA s panTro5.chr5 5289683 13 - 181907262 ATACAAAAGTAGA i panTro5.chr5 C 0 C 0 s panPan2.chr5 5551999 13 - 183735486 ATACAAAAGTAGA i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1683834 13 + 3967317 ATACAAAAGTAGA i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4508307 13 + 163208435 ATACAGAAGTAGA i nomLeu3.chr2 C 0 C 0 s macFas5.chr6 5927580 13 - 181584905 ATGCAAAAGTGGA i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 955793 13 - 16193990 ATGCAAAAGTGAA i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1778801 13 - 21434487 ATGCAAAAGTAGA i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4741695 13 - 82825804 ATGCAAAAGTAGA i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 237049 13 + 2521317 ATGCAAAAGTAGA i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1728313 13 - 2415367 ATGCAAAAGTAGC i colAng1.NW_012115755v1 C 0 C 0 s saiBol1.JH378186 2198099 13 + 10068113 ATACAAAAGTAGA i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 53131 13 - 709587 ATACAAAAGTAGA i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1154012 13 - 2246441 ACACGAAAGTAGA i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1227181 13 + 48283576 gtacaaaagcaga i otoGar3.GL873522 C 0 I 7559 e mm10.chr13 65979384 6914 - 120421639 I e calJac3.chr2 64069878 9594 + 204313951 I e rheMac8.chr6 5740958 180 - 180051392 I e canFam3.chr4 37170079 847 + 88276631 I e proCoq1.NW_012152163v1 758448 6575 - 940639 I e dasNov3.JH562710 245691 6502 - 960158 I a score=28649.000000 s hg38.chr5_KI270795v1_alt 41134 4 + 131892 ATAA s panTro5.chr5 5289696 4 - 181907262 ATAA i panTro5.chr5 C 0 C 0 s panPan2.chr5 5552012 4 - 183735486 ATAA i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1683847 4 + 3967317 ATAA i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4508320 4 + 163208435 ATAG i nomLeu3.chr2 C 0 C 0 s macFas5.chr6 5927593 4 - 181584905 ATAG i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 955806 4 - 16193990 ATAG i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1778814 4 - 21434487 ATAG i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4741708 4 - 82825804 ATAG i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 237062 4 + 2521317 ATAG i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1728326 4 - 2415367 ATAG i colAng1.NW_012115755v1 C 0 C 0 s saiBol1.JH378186 2198112 4 + 10068113 ATAG i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 53144 4 - 709587 ATAG i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1154025 4 - 2246441 ATAG i aotNan1.NW_018501968v1 C 0 C 0 e mm10.chr13 65979384 6914 - 120421639 I e calJac3.chr2 64069878 9594 + 204313951 I e otoGar3.GL873522 1227194 7559 + 48283576 I e rheMac8.chr6 5740958 180 - 180051392 I e canFam3.chr4 37170079 847 + 88276631 I e proCoq1.NW_012152163v1 758448 6575 - 940639 I e dasNov3.JH562710 245691 6502 - 960158 I a score=253020.000000 s hg38.chr5_KI270795v1_alt 41138 29 + 131892 TAtcaggttggtgcaaaagcagttgtggt s panTro5.chr5 5289700 29 - 181907262 TAtcaggttggtgcaaaagcagttgtggt i panTro5.chr5 C 0 C 0 s panPan2.chr5 5552016 29 - 183735486 TAtcaggttggtgcaaaagcagttgtggt i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1683851 28 + 3967317 TATCACgttggtgcaaaa-cagttgtggt i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4508324 29 + 163208435 TACGaggttggtgcaaaagtaattgtggt i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5741138 29 - 180051392 tatcaggttggtgcaaaagtagttgtggt i rheMac8.chr6 I 180 C 0 s macFas5.chr6 5927597 29 - 181584905 TAtcaggttggtgcaaaagtagttgtggt i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 955810 29 - 16193990 TAtcaggttggtgcaaaagtagttgtggt i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1778818 29 - 21434487 TAtcaggttggtgcaaaagtaattgtggt i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4741712 29 - 82825804 TAtcaggttggtgcaaaagtaattgtggt i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 237066 29 + 2521317 TAtcaggttggtgcaaaagtaattgtggt i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1728330 29 - 2415367 TAtcaggttggtgcaaaagtaattgtggt i colAng1.NW_012115755v1 C 0 C 0 s saiBol1.JH378186 2198116 29 + 10068113 TGtcaggttggtgcaaaagtagttatggt i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 53148 29 - 709587 TGtcaggttggtgcaaaagtagttgtggt i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1154029 29 - 2246441 TGtcagattggtgcaaaagtagttgtggt i aotNan1.NW_018501968v1 C 0 C 0 e mm10.chr13 65979384 6914 - 120421639 I e calJac3.chr2 64069878 9594 + 204313951 I e otoGar3.GL873522 1227194 7559 + 48283576 I e canFam3.chr4 37170079 847 + 88276631 I e proCoq1.NW_012152163v1 758448 6575 - 940639 I e dasNov3.JH562710 245691 6502 - 960158 I a score=83564.000000 s hg38.chr5_KI270795v1_alt 41167 10 + 131892 ttttgccatt s panTro5.chr5 5289729 10 - 181907262 ttttgccatt i panTro5.chr5 C 0 C 0 s panPan2.chr5 5552045 10 - 183735486 ttttgccatt i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1683879 10 + 3967317 ttttgccatt i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4508353 10 + 163208435 ttttgccatt i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5741167 10 - 180051392 ttttgccatt i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5927626 10 - 181584905 ttttgccatt i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 955839 10 - 16193990 ttttgccatt i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1778847 10 - 21434487 ttttgccatt i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4741741 10 - 82825804 ttttgccatt i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 237095 10 + 2521317 ttttgccatt i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1728359 10 - 2415367 ttttgccatt i colAng1.NW_012115755v1 C 0 C 0 s cebCap1.NW_016107999v1 53177 10 - 709587 ttttgccatt i cebCap1.NW_016107999v1 C 0 I 6641 s aotNan1.NW_018501968v1 1154058 10 - 2246441 ttttgctatt i aotNan1.NW_018501968v1 C 0 I 4267 e saiBol1.JH378186 2198145 0 + 10068113 C e mm10.chr13 65979384 6914 - 120421639 I e calJac3.chr2 64069878 9594 + 204313951 I e otoGar3.GL873522 1227194 7559 + 48283576 I e canFam3.chr4 37170079 847 + 88276631 I e proCoq1.NW_012152163v1 758448 6575 - 940639 I e dasNov3.JH562710 245691 6502 - 960158 I a score=406417.000000 s hg38.chr5_KI270795v1_alt 41177 69 + 131892 actttcaatCTATCAACTAATGGTAATGATCCTGATTTGAATCTAA-TTCAGACATCCAATTAGAAACTT s panTro5.chr5 5289739 69 - 181907262 actttcaatCTATCAACTAATGGTAATGATCCTGATTTGAATCTAA-TTCAGACATCCAATTAGAAACTT i panTro5.chr5 C 0 C 0 s panPan2.chr5 5552055 69 - 183735486 actttcaaCCTATCAACTAATGGTAATGATCCTGATTTGAATCTAA-TTCAGACATCCAATTAGAAACTT i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1683889 69 + 3967317 actttcaatCTGTCAACTAATGGTAATGATCCTGATTTGAATCTAA-TTCAGACATCCAATTAGAAACTT i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4508363 70 + 163208435 actttcaatCTATCAACTAATGCCAGTGATCCTGATTTGAATCTAATTTCAGACATCCAATTAGAAACTT i nomLeu3.chr2 C 0 M 53032 s rheMac8.chr6 5741177 69 - 180051392 actttcaatCTGTCAACTAATGGCAATGATCCTGATTTGAATCTAA-TTCAGACATCCAATTAGAAACTT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5927636 69 - 181584905 actttcaatCTGTCAACTAATGGCAATGATCCTGATTTGAATCTAA-TTCAGACATCCAATTAGAAACTT i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 955849 69 - 16193990 actttcaatCTGTCAACTAATGGCAATGATCCTGATTTGAATCTAA-TTCAGACATCCAATTAGAAACTT i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1778857 69 - 21434487 actttcaatCTGTCAACTAATGGCAATGACCCTGATTTGAATCTAA-TTCAGACATCCAATTAGAAACTT i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4741751 69 - 82825804 actttcaatCTGTCAACTAATGGCAATGATCCTGATTTGAATCTAA-TTCAGACATCCAATTAGAAACTT i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 237105 69 + 2521317 actttcaatCTGTCAACTAATGGCAATGATCCTGATTTGAATCTAA-TTCAGACATCCAATTAGAAACTT i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1728369 69 - 2415367 actttcagtCTGTCAACTAATGGCAATGATCCTGATTTGAATCTAA-TTCAGACATCCAATTAGAAACTT i colAng1.NW_012115755v1 C 0 C 0 e cebCap1.NW_016107999v1 53187 6641 - 709587 I e saiBol1.JH378186 2198145 0 + 10068113 C e mm10.chr13 65979384 6914 - 120421639 I e calJac3.chr2 64069878 9594 + 204313951 I e otoGar3.GL873522 1227194 7559 + 48283576 I e canFam3.chr4 37170079 847 + 88276631 I e proCoq1.NW_012152163v1 758448 6575 - 940639 I e dasNov3.JH562710 245691 6502 - 960158 I e aotNan1.NW_018501968v1 1154068 4267 - 2246441 I a score=217794.000000 s hg38.chr5_KI270795v1_alt 41246 45 + 131892 GACgccgggcatagtggctcatacctgtaatcccagcactttggg s panTro5.chr5 5289808 45 - 181907262 GACgccgggcatagtggctcatgcctgtaatcccagcactttggg i panTro5.chr5 C 0 C 0 s panPan2.chr5 5552124 45 - 183735486 GACgccgggcatagtggctcatgcctgtaatcccagcactttggg i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1683958 45 + 3967317 GACgccgggcatagtggctcatgcctgtaatcccagcactttggg i gorGor5.CYUI01015413v1 C 0 C 0 s rheMac8.chr6 5741246 45 - 180051392 GACgccaggcacagtggctcatgcctgtaatccctgcattttggg i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5927705 45 - 181584905 GACgccaggcacagtggctcatgcctgtaatccctgcactttggg i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 955918 45 - 16193990 GACgccaggcacagtggctcatgcctgtaatccctgcactttggg i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1778926 45 - 21434487 GACgccaggcacagtggctcacgcctgtaatccctgcactttggg i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4741820 45 - 82825804 GACgccaggcacagtggctcacgcctgtaatcccagcactttggg i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 237174 45 + 2521317 GATgccaggcacagtggctcacgcctgtaatccctgcactttggg i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1728438 45 - 2415367 GACgccaggcacagtggctcacgcctgtaatcccagcactttggg i colAng1.NW_012115755v1 C 0 C 0 e cebCap1.NW_016107999v1 53187 6641 - 709587 I e saiBol1.JH378186 2198145 0 + 10068113 C e mm10.chr13 65979384 6914 - 120421639 I e nomLeu3.chr2 4508433 53032 + 163208435 M e calJac3.chr2 64069878 9594 + 204313951 I e otoGar3.GL873522 1227194 7559 + 48283576 I e canFam3.chr4 37170079 847 + 88276631 I e proCoq1.NW_012152163v1 758448 6575 - 940639 I e dasNov3.JH562710 245691 6502 - 960158 I e aotNan1.NW_018501968v1 1154068 4267 - 2246441 I a score=10948.000000 s hg38.chr5_KI270795v1_alt 41291 4 + 131892 aggc s panTro5.chr5 5289853 4 - 181907262 aggc i panTro5.chr5 C 0 C 0 s panPan2.chr5 5552169 4 - 183735486 aggc i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1684003 4 + 3967317 aggc i gorGor5.CYUI01015413v1 C 0 C 0 s macNem1.NW_012018466v1 955963 4 - 16193990 aggc i macNem1.NW_012018466v1 C 0 I 7426 s cerAty1.NW_012007035v1 1778971 4 - 21434487 aggc i cerAty1.NW_012007035v1 C 0 I 7234 s manLeu1.NW_012103943v1 237219 4 + 2521317 aggc i manLeu1.NW_012103943v1 C 0 I 16701 s colAng1.NW_012115755v1 1728483 4 - 2415367 aggc i colAng1.NW_012115755v1 C 0 I 8080 e cebCap1.NW_016107999v1 53187 6641 - 709587 I e saiBol1.JH378186 2198145 0 + 10068113 C e mm10.chr13 65979384 6914 - 120421639 I e nomLeu3.chr2 4508433 53032 + 163208435 M e calJac3.chr2 64069878 9594 + 204313951 I e otoGar3.GL873522 1227194 7559 + 48283576 I e rheMac8.chr6 5741291 0 - 180051392 C e macFas5.chr6 5927750 0 - 181584905 C e canFam3.chr4 37170079 847 + 88276631 I e proCoq1.NW_012152163v1 758448 6575 - 940639 I e dasNov3.JH562710 245691 6502 - 960158 I e aotNan1.NW_018501968v1 1154068 4267 - 2246441 I e chlSab2.chr23 4741865 0 - 82825804 C a score=2292.000000 s hg38.chr5_KI270795v1_alt 41295 4 + 131892 tgag s panTro5.chr5 5289857 4 - 181907262 tgag i panTro5.chr5 C 0 C 0 s panPan2.chr5 5552173 4 - 183735486 tgag i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1684007 4 + 3967317 tgag i gorGor5.CYUI01015413v1 C 0 C 0 e cebCap1.NW_016107999v1 53187 6641 - 709587 I e saiBol1.JH378186 2198145 0 + 10068113 C e mm10.chr13 65979384 6914 - 120421639 I e nomLeu3.chr2 4508433 53032 + 163208435 M e calJac3.chr2 64069878 9594 + 204313951 I e otoGar3.GL873522 1227194 7559 + 48283576 I e cerAty1.NW_012007035v1 1778975 7234 - 21434487 I e macNem1.NW_012018466v1 955967 7426 - 16193990 I e rheMac8.chr6 5741291 0 - 180051392 C e macFas5.chr6 5927750 0 - 181584905 C e canFam3.chr4 37170079 847 + 88276631 I e proCoq1.NW_012152163v1 758448 6575 - 940639 I e dasNov3.JH562710 245691 6502 - 960158 I e aotNan1.NW_018501968v1 1154068 4267 - 2246441 I e colAng1.NW_012115755v1 1728487 8080 - 2415367 I e manLeu1.NW_012103943v1 237223 16701 + 2521317 I e chlSab2.chr23 4741865 0 - 82825804 C a score=173586.000000 s hg38.chr5_KI270795v1_alt 41299 205 + 131892 ttttgccattactgtcaatggcaaaaaccacaactacttttgcaccaatgtaaTATAAGGCACTTGTTCTCAACCAGGGTT--GAGGGTGTCAAAGGGGGCAAAAATTAGTTCTTGTGGAGGGAGTGAATAAATCTTAGGCAAatctctaaataagattcttttaaggccaggcttggtggctcacacctgtaatcctagca--ctggt s panTro5.chr5 5289861 207 - 181907262 ttttgccattactgtcaatggcaaaaaccacaactacttttgcaccaatgtaaTATAAGGCACTTGTTCTCAACCAGGGTT--GAGGGTGTCAAAGGGGGCAAAAATTAGTTCTTGTGGAGGGAGTGAATAAATCTTAGGCAAatctctaaataagattcttttaaggccaggcttggtggctcacacctgtaatcctagcactctggt i panTro5.chr5 C 0 C 0 s panPan2.chr5 5552177 207 - 183735486 ttttgccattactgtcaatggcaaaaaccacaactacttttgcaccaatgtaaTATAAGGCACTTGTTCTCAACCAGGGTT--GAGGGTGTCAAAGGGGGCAAAAATTAGTTCTTGTGGAGGGAGTGAATAAATCTTAGGCAAatctctaaataagattcttttaaggccaggcttggtggctcacacctgtaatcctagcactctggt i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1684011 207 + 3967317 ttttgccattactgtcaatggcaaaaaccacaactacttttgcaccaatgtaaTATAAGGCACTTGTTCTCAACCAGGGTT--GAGGGTGTCAAAGGGGGCAAAAATTAGTTCTTGTGGAGGGAGTGAATAAATCTTAGGCAAatctgtaaataagattcttttaaggccaggcttggtggctcacacctgtaatcctagcactctggt i gorGor5.CYUI01015413v1 C 0 C 0 s saiBol1.JH378186 2198145 209 + 10068113 ttttgctattgaaagtaatggcaaaaaccacaactacttttgcaccagcctaaTATAATGCACGTGTTCTCAAGCAGGGTTAAGAGGGTTTCAAAGGGGGCAAAAATTTGTTCTTGTGGAGGGAGTGGATAAATCTTAGGCAAatctctaaataagagacttttaaggctggacatggtagctcacacctgtaatcctagcactttggg i saiBol1.JH378186 C 0 C 0 e cebCap1.NW_016107999v1 53187 6641 - 709587 I e mm10.chr13 65979384 6914 - 120421639 I e nomLeu3.chr2 4508433 53032 + 163208435 M e calJac3.chr2 64069878 9594 + 204313951 I e otoGar3.GL873522 1227194 7559 + 48283576 I e cerAty1.NW_012007035v1 1778975 7234 - 21434487 I e macNem1.NW_012018466v1 955967 7426 - 16193990 I e rheMac8.chr6 5741291 0 - 180051392 C e macFas5.chr6 5927750 0 - 181584905 C e canFam3.chr4 37170079 847 + 88276631 I e proCoq1.NW_012152163v1 758448 6575 - 940639 I e dasNov3.JH562710 245691 6502 - 960158 I e aotNan1.NW_018501968v1 1154068 4267 - 2246441 I e colAng1.NW_012115755v1 1728487 8080 - 2415367 I e manLeu1.NW_012103943v1 237223 16701 + 2521317 I e chlSab2.chr23 4741865 0 - 82825804 C a score=533723.000000 s hg38.chr5_KI270795v1_alt 41504 237 + 131892 aggcccaggtgggtggatcatttgattccaggagtttgagattagcctgggcaacatggcaaaaccccatctctactacaaaaaatacaaatatttacctaggcgtggtggcgtgcacctgtagtcccagctactgggagggggctgaggtgggaggattgcctgagtctaggaagtcaaagctgcagtgagcagtgatca---cactgtactccagcctgggtgacagagtgagaaccc s panTro5.chr5 5290068 240 - 181907262 aggcccaggtgggtggatcatttgattccaggagtttgagattagcctgggcaacgtggcaaaaccccatctctactacaaaaaatacaaatatttacctaggcgtggtggcgtgcacctgtagtcccagctactgggagggggctgaggtgggaggattgcctgagtctaggaagtcaaagctgcagtgagcagtgatcacaccactgtactctagcctgggtgacagagtgagaaccc i panTro5.chr5 C 0 C 0 s panPan2.chr5 5552384 240 - 183735486 aggcccaggtgggtggatcatttgattccaggagtttgagattagcctgggcaacgtggcaaaaccccatctctactacaaaaaatacaaatatttacctaggcgtggtggcgtgcacctgtagtcccagctactgggagggggctgaggtgggaggattgcctgagtctaggaagtcaaagctgcagtgagcagtgatcacaccactgtactccagcctgggtgacagagtgagaaccc i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1684218 240 + 3967317 aggcccaggtgtgtggatcatttgattccaggagtttgagattagcctgggcaacatggcaaaaccccatctctactacaaaaaatacaaatatttacctaggcatggtggcgtgcacctgtagtcccagctactgggagggggctgaggtgggaggattgcctgagtctaggaagtcaaagctgcagtgagcagtgatcacaccactgtactccagcctgggtgacagagtgagaccct i gorGor5.CYUI01015413v1 C 0 C 0 s rheMac8.chr6 5741291 238 - 180051392 aggcccaggtgggtggattgtttgagtccagaagtttgagattagcctgggcaacatgacaaaaccccatctgtactgcaaaaactacaaatatttagctgggcatggtggcgtgcacctgtagtctcagctactgg--agaggctgaggtgggaggattgcctgagtctaggaagtcagagctgcagtgagcagtgatcacaccgctgtactccagcctgcttgacagagtgagacccc i rheMac8.chr6 C 0 I 1 s macFas5.chr6 5927750 233 - 181584905 aggcccaggtgggtggattgtttgagtccagaagtttgagattagcctgggcaacatgacaaaaccccatctgtactgcaaaaactacaaat-----gctgggcatggtggcgtgcacctgtagtctcagctactgg--agaggctgaggtgggaggattgcctgagtctaggaagtcagagctgcagtgagcagtgatcacaccgctgtactccagcctgcttgacagagtgagacccc i macFas5.chr6 C 0 I 1 s chlSab2.chr23 4741865 237 - 82825804 aggcccaggtgggtggattgtttg-gtccaggagtttgagattagcctgggcaacatgacaaaaccccatctctactgcaaaaactacaaatatttagctgggcatggtggcgtgcacctgtagtctcagctactgg--agaggctgaggcgggaggattgcctgagtctaggaagtcaaagcttcagtgagcagtgatcatgccgctgtactccagcctgcttgacagagtgagacccc i chlSab2.chr23 C 0 I 27 s saiBol1.JH378186 2198354 238 + 10068113 aaactgaggtgggtggattgtttgagtccaggagtttgagattagcctaggcaacatggcaaaaccctatctctactacaaaaaatacaaatatttagcttgggattgtggtgtgcacccatagtgtcagctatctg--ggaggctgaggtgggaggactgcctgagcccaggaaatcaaagccacagtgagcagtgattgcacgactgtattccagcctgggtgacagagtaagacccc i saiBol1.JH378186 C 0 I 1 e cebCap1.NW_016107999v1 53187 6641 - 709587 I e mm10.chr13 65979384 6914 - 120421639 I e nomLeu3.chr2 4508433 53032 + 163208435 M e calJac3.chr2 64069878 9594 + 204313951 I e otoGar3.GL873522 1227194 7559 + 48283576 I e cerAty1.NW_012007035v1 1778975 7234 - 21434487 I e macNem1.NW_012018466v1 955967 7426 - 16193990 I e canFam3.chr4 37170079 847 + 88276631 I e proCoq1.NW_012152163v1 758448 6575 - 940639 I e dasNov3.JH562710 245691 6502 - 960158 I e aotNan1.NW_018501968v1 1154068 4267 - 2246441 I e colAng1.NW_012115755v1 1728487 8080 - 2415367 I e manLeu1.NW_012103943v1 237223 16701 + 2521317 I a score=13930.000000 s hg38.chr5_KI270795v1_alt 41741 17 + 131892 atctc--------aaaaaaaaaaaa--- s panTro5.chr5 5290308 25 - 181907262 atctcaaaaaaaaaaaaaaaaaaaa--- i panTro5.chr5 C 0 C 0 s panPan2.chr5 5552624 21 - 183735486 atcta----caaaaaaaaaaaaaaa--- i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1684458 20 + 3967317 atctc-----aaaaaaaaaaaaaaa--- i gorGor5.CYUI01015413v1 C 0 C 0 s rheMac8.chr6 5741530 20 - 180051392 atctc-----aaaaaaaTTAATTAA--- i rheMac8.chr6 I 1 I 6 s macFas5.chr6 5927984 20 - 181584905 atctc-----aaaaaaaTTAATTAA--- i macFas5.chr6 I 1 I 6 s saiBol1.JH378186 2198593 23 + 10068113 atcgc-----aaggaaaaaaaaaaaaaa i saiBol1.JH378186 I 1 C 0 e cebCap1.NW_016107999v1 53187 6641 - 709587 I e mm10.chr13 65979384 6914 - 120421639 I e nomLeu3.chr2 4508433 53032 + 163208435 M e calJac3.chr2 64069878 9594 + 204313951 I e otoGar3.GL873522 1227194 7559 + 48283576 I e cerAty1.NW_012007035v1 1778975 7234 - 21434487 I e macNem1.NW_012018466v1 955967 7426 - 16193990 I e canFam3.chr4 37170079 847 + 88276631 I e proCoq1.NW_012152163v1 758448 6575 - 940639 I e dasNov3.JH562710 245691 6502 - 960158 I e aotNan1.NW_018501968v1 1154068 4267 - 2246441 I e colAng1.NW_012115755v1 1728487 8080 - 2415367 I e manLeu1.NW_012103943v1 237223 16701 + 2521317 I e chlSab2.chr23 4742102 27 - 82825804 I a score=1945077.000000 s hg38.chr5_KI270795v1_alt 41758 852 + 131892 ------aagattaaaagctagtaaccacaatattgtcatgcctaaaacattaaaaataccttcttaatatcataaaatacccaatgttcaagg-tgtt-----tttgtttg-tttttgtttttgagacagagtcttgctgcattgcccaggctggagtacagttgcacaatcttggctcactgcaactcctgcctcctgggttcaagtgatcctcagcctcctgaatatctgggactacaggtatatgccaccatgcccggcttattttt--------ttgtatttttagtagagaaagggttttgccatgttggccaggctggtcttgaactcctggcctcaagtgatttgcccgcctcagcctcccaaagtgctgggattacaggcgtgagccgc-gtgcctggcgtcaagtttctaattggatgtctgaattagatttaagtcaggatcattgccattagttgatagatctcttaagtctatttaacataaagttctccat-ggttctctttcttttttcttgcaatttacttgttgaagacattgggtcatttgtctgtagagtctctcacagtgtggattttgtagattgcattcttgtggtatcatttaacatgttcctctgtGCTTTAATTTGTTGCtcggcttttattggagtatggctgattgacagtaaactgcatctatttagagtgtacagttttataaactttcacagatgtatacatccacgaaaccattaccacaattgagatagtgaacatagcctttgtcccaacggtgtcctcttgactgtcatcactcccccatggatgccaccctcccataagaaagcactgttctcatttgtgttactataatttagtttgcat s panTro5.chr5 5290333 848 - 181907262 ------aagattaaaagctagtaaccacaatattgtcatgcctaaaacattaaaaataccttcttaatatcataaaatacccaatgttcaagg----------tttttttg-tttttgtttttgagacagagtcttgctgcattgcccaggctggagtacagttgcacaatcttggctcactgcaactcctgcctcctgggttcaagcgatcctcagcctcctgaatatctgggactacaggtatatgccaccatgcctggcttattttt--------ttgtatttttagtagagaaagggttttgccatgttggccaggctggtcttgaactcctggcctcaagtgatctgtccgcctcagcctcccaaagtgctgggattacaggcgtgagccac-gtgcctggcgtcaagtttctaattggatgtctgaattagattcaagtcaggatcattgccattagttgatagatctcttaagtctatttaacataaagttctccat-ggttctctttcttttttcttgcaatttacttgttgaagacactgggtcatttgtctgtagagtctctcacagtgtggattttgtagattgcattcttgtggtatcatttaacatgttcctctgtGCTTTAATTTGTTGCtcggcttttattggggtatggctgattgacagtaaactgcatctatttagagtgtacagttttataaactttcacagatgtatacatccacgaaaccattaccacaattgagatagtgaacatagcctttgtcccaacggtgtcctcttgactgtcatcactcccccatggatgccaccctcccataagaaagcactgttctgatttgtgttactataatttagtttgcat i panTro5.chr5 C 0 C 0 s panPan2.chr5 5552645 848 - 183735486 ------aagattaaaagctagtaaccacaatattgtcatgcctaaaacattaaaaataccttcttaatatcataaaatacccaatgttcaagg----------tttttttg-tttttgtttttgagacagagtcttgctgcattgcccaggctggagtacagttgcacaatcttggctcactgcaactcctgcctcctgggttcaagcgatcctcagcctcctgaatatctgggactacaggtatatgccaccatgcctggcttattttt--------ttgtatttttagtagagaaagggttttgccatgttggccaggctggtcttgaactcctggcctcaagtgatctgtccgcctcagcctcccaaagtgctgggattacaggcgtgagccac-gtgcctggcgtcaagtttctaattggatgtctgaattagattcaagtcaggatcattgccattagttgatagatctcttaagtctatttaacataaagttctccat-ggttctctttcttttttcttgcaatttacttgttgaagacactgggtcatttgtctgtagagtctctcacagtgtggattttgtagattgcattcttgtggtatcatttaacatgttcctctgtGCTTTAATTTGTTGCtcggcttttattggggtatggctgattgacagtaaactgcatctatttagagtgtacagttttataaactttcacagatgtatacatccacgaaaccattaccacaattgagatagtgaacataacctttgtcccaacggtgtcctcttgactgtcatcactcccccatggatgccaccctcccataagaaagcactgttctgatttgtgttactataatttagtttgcat i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1684478 853 + 3967317 ------aagattaaaagctagtaaccatgatattgtcatgcctaaaacattaaaaataccttcttaatatcataaaatacccaatgttcaaggttttt-----tttgtttgttttttgtttttgagacagagtcttgctgcattgcccaggctggagtacagttgcacaatcttgggtcactgcaacttctgcctcctgggttcaagcgatcctcagcctcctgaatatctgggactacaggtatatgccaccatgcccggcttattttt--------ttgtatttttagtagagaaagggttttgccgtgttggccaggctggtcttgaactcctggcctcaagtgatctgcccgcctcagcctcccaaagtgctgggattacaggcgtgagccac-ttgcctggtgtcaagtttgtaattggatgtctgaattagatttaagtcaggatcattgccattagttgatagatctcttaagtctatttaacataaagttctccat-ggttctctttcttttttcttgcaatttacttgttgaagacactgggtcatttgtctgtagagtctctcacagtgtgga-tttgtagattgcattcttgtggtatcatttaacatgttcctctgtGCTTTAATTTGTTGCtcggcttttattggggtatggttgattgacagtaaactgcatctatttagagagtacagttttataaactttcacagatgtatacatccacgaaaccattaccacaattgagatagtgaacatagcctttgtcccaacggtgtcctcttgactgtcatcactcccccatggatgccaccctcccataagaaagcgctgttctgatttgtgttactataatttagtttgcat i gorGor5.CYUI01015413v1 C 0 C 0 s rheMac8.chr6 5741556 858 - 180051392 ------AAAATAAAaaaattgtaaccacaatattatcacacctaaaacattaaaaataccttcttaatatcataaaatacccagtgttcaaggtttttgtttgtttgtttg-tttttgtttttgagatagagtcttgctccattgcccaggctggcgtgcagttgcatgatcttggctcactgcaacccctgcctcctaggttcaagcgatcctcagcctcctgaatatctgggactacaggcatgcaccaccaagcctggcttattttt--------ttgtatttttggtagtgaaggggttttgccatgttggccaggctggtcttgaattcctggcctcaagtggtctgcccgcctcggcctcccaaagtgcagggattacaggcgtgagccactgtgcctggcgtcaagtttctaattggatgtctgaattagattcaaatcaggatcattgacattagttgatagatctcttaagtctatttgacataaagttctccat-ggttctctttcttttttcttgcaatttacttgttgaagacactgggtcatttgcctgtagagtctctcacagtgtggattttgtagattgcattcttgtggtatcatttaacatgttcctctgtgcttttatttGTTGCtcggc-tttatttgggtgtggttgattgatagtaaactgcatctattgaaagtatacagttttataaactttcacagatgtatacatccacgaaaccattaccacaattgagatagtgaacatagccattgccccgacggtgtattcttaactgtcatcactcccccatggatgccacccttcgataagaaagcacggttctgatttgtgttactataatttagtttgcat i rheMac8.chr6 I 6 C 0 s macFas5.chr6 5928010 858 - 181584905 ------AAAATAAAaaaattgtaaccacaatattatcacacctaaaacattaaaaataccttcttaatatcataaaatgcccagtgttcaaggtttttgtttgtttgtttg-tttttgtttttcagatagagtcttgctccattgcccaggctggcgtgcagttgcatgatcttggctcactgcaacccctgcctcctaggttcaagcgatcctcagcctcctgaatatctgggactacaggcatgcaccaccaagcctggcttattttt--------ttgtatttttggtagtgaaggggttttgccatgttggccaggctggtcttgaattcctggcctcaagtggtctgcccgcctcggcctcccaaagtgcagggattacaggcgtgagccactgtgcctggcgtcaagtttctaattggatgtctgaattagattcaaatcaggatcattgacattagttgatagatctcttaagtctatttgacataaagttctccat-ggttctctttcttttttcttgcaatttacttgttgaagacactgggtcatttgcctgtagagtctctcacagtgtggattttgtagattgcattcttgtggtatcatttaacatgttcctctgtgcttttatttGTTGCtcggc-tttatttgggtgtggttgattgatagtaaactgcatctattgaaagtatacagttttataaactttcacagatgtatacatccacgaaaccattaccacaattgagatagtgaacatagccattgccccgacggtgtattcttaactgtcatcactcccccatggatgccacccttcgataagaaagcacggttctgatttgtgttactataatttagtttgcat i macFas5.chr6 I 6 C 0 s chlSab2.chr23 4742129 853 - 82825804 ------AAAATAAAaaaattgtaaccacaatattatcacacctaaaacattaaaaataccttcttaatatcataaaatacccaatgttcaagg-ttttgtttgtttgtttg-tttttgtttttgagat--agtcttgctccattgcccaggctggcgtgcagttgcatgatcttggctcactgcaacccctgcctcctaggttcaagtgatcctcagcctcctgaatatctgggactataggcatgcaccaccatgcctggcttattttt--------ttgtgtttttggtagagaaggggttttgccatgttggccaggctggtcttgaattcctggcctcaagtgatctgcccacctcggcctcccaaagtgctgggattacaagcgtgagcaactgtgcctggcatcaagtttctaattggatgtctgaattagattcaaatcaggatcattgacattagttgatagatctcttaagtctatttaacataaagttctccat-ggttctctttcttttttcttgcaatgtacttgttgaagacactgggtcatttgcctgtagagtctctcacagtgtggattttgtagattgcattcttgtggtatcatttaacatgttcctctgtgcttttatttGTTGCtcggc-tttattggggtgtagttggttgacagtaaactgcatctattgaaagtatacagttttataaactttcacagatgtatacatccacgaaaccattaccacaattgagatagtgaacatagccattgccccgacggtgtattcttgac--tcatcactcccccatggatgccactctcccataagaaagcacggttctgatttgtgttactgtaatttagtttgcat i chlSab2.chr23 I 27 C 0 s saiBol1.JH378186 2198616 841 + 10068113 aagaaagaaagaaaaaaattgtaaccacaatattatcacacctaaaaaatttaaaatatcttcttaatatcataaaatacacaatgttcaa---cttcttttgtttgtttg-tttttgtttttgagacagaatcttgttccattgcccaggttggagtgcagttgcacaatctctgctcactgcaactgctgcctcttgggttcaagtgatcctcagcctcctgaatagctgggactacaggcatgcaccactacacgtagctattttttttttttaattgtatttttagtagagatggggtttcaccatgttggccaggctggtcttgaactcctggcctc----------------------------agtgctgggattagaggtgtgagccactgtgctgagcctcaagtttctaattggatgtctgaatcagattcaaatcaggatcgttgccattagttgatagatatcttaagtctatttaacataaagttctccatgggttctttttcttttttcttgcaatttacttgttgaagacactgggtcatttgcctgtagagtttctcactgggtggattttgtagattgcattcttgtggtatcatttaacatgttcctctgtGCTTGAAGTTGCTGCTATTc-tttatt-gggtatggttggtttacagtaaactgcatatgtttaaagtatatagttttataaactttcacagacgtatacatccacgaaaccattaccacaattgagacagtgaacacagccattgccccgatggtgtcctcttgactgccatcactcccctatggatgccaccctcccagaagaaaacattgttctgatgtgtgttactataatttagtttgcat i saiBol1.JH378186 C 0 C 0 e cebCap1.NW_016107999v1 53187 6641 - 709587 I e mm10.chr13 65979384 6914 - 120421639 I e nomLeu3.chr2 4508433 53032 + 163208435 M e calJac3.chr2 64069878 9594 + 204313951 I e otoGar3.GL873522 1227194 7559 + 48283576 I e cerAty1.NW_012007035v1 1778975 7234 - 21434487 I e macNem1.NW_012018466v1 955967 7426 - 16193990 I e canFam3.chr4 37170079 847 + 88276631 I e proCoq1.NW_012152163v1 758448 6575 - 940639 I e dasNov3.JH562710 245691 6502 - 960158 I e aotNan1.NW_018501968v1 1154068 4267 - 2246441 I e colAng1.NW_012115755v1 1728487 8080 - 2415367 I e manLeu1.NW_012103943v1 237223 16701 + 2521317 I a score=1883000.000000 s hg38.chr5_KI270795v1_alt 42610 660 + 131892 ttcttagtgttttagctagaatcatagaatatgtacttttttgtctggcttctttcactcagcataatta-ttttgagattaatctatgttgttgtttgcataaatatttcattcctgtttattgctaaataatattcaattgaatggctatatcatgatttgttgttagccatttgaattttttccagtttttggcttttacaaacaaagctgctctgaacatttgtgtacaagtttttacatggatatatatttccttttctcttgggaatttcct-aagagtggaacggctggatcatattgtaagcatgtgtttaactgcacccaccatgagagtgccatttcctctacattctcaccaatacttgttatggtcagtctttttcactgaaaccattctattaggttggtacaaaagtaattgcagt-tttgctctcaaaagtaatggcaaaaaccacaattacttttgcacacacctaataatatgtgagtaatgtgtgtgcgtgtgtgtgtgtgtgtgtgAattctagctcctttgctagaattttaaaattagcttgctaatttgtacaaaaaaatgctccctgatatttttattaagattgtgttgcatatagggatcaaact-gggagaattgccatgttaaatattgactattct s panTro5.chr5 5291181 660 - 181907262 ttcttagagttttagctagaatcatagaatatgtacttttttgtctggcttctttcactcagcataatta-ttttgagattaatctatgttgttgtttgcataaatatttcattcctgtttattgctaaataatattcaattgaatggctatatcatgatttgttgttagccatttgaattttttccagtttttggcttttacaaacaaagctgctcagaacatttgggtacaagtttttacatggatatatatttccttttctcttgggaatttcct-aagagtggaacggctggatcatattgtaagcatgtgtttaactgcacccaccatgagagtgccatttcctctacattctcaccaatacttgttatggtcagtctttttcactgaaaccattctattaggttggtacaaaagtaattgcagt-tttgctctcaaaagtaatggcaaaaaccacaattacttttgcacacacctaataatatgtgagtaAtgtgtgtgtgtgtgtgtgtgtgtgtgtgAattctagctcctttgctagaattttaaaattagcttgctaatttgtacaaaaaaatgctccctgatatttttattaagattgtgttgcatatagggatcaaacc-gggagaattgccatgttaaatattgactattct i panTro5.chr5 C 0 C 0 s panPan2.chr5 5553493 654 - 183735486 ttcttagagttttagctagaatcatagaatatgtacttttttgtctggcttctttcactcagcataatta-ttttgagattaatctatgttgttgtttgcataaatatttcattcctgtttattgctaaataatattcaattgaatggctatatcatgatttgttgttagccatttgaattttttccagtttttggcttttacaaacaaagctgctcagaacatttgggtacaagtttttacatggatatatatttccttttctcttgggaatttcct-aagagtggaacggctggatcatattgtaagcatgtgtttaactgcacccaccatgagagtgccatttcctctacattctcaccaatacttgttatggtcagtctttttcactgaaaccattctattaggttggtacaaaagtaattgcagt-tttgctctcaaaagtaatggcaaaaaccacaattacttttgcacacacctaataatatgtgagtaatgt------gtgtgtgtgtgtgtgtgtgAattctagctcctttgctagaattttaaaattagcttgctaatttgtacaaaaaaatgctccctgatatttttattaagattgtgttgcatatagggatcaaacc-gggagaattgccatgttaaatattgactattct i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1685331 654 + 3967317 ttcttagtgttttagctagaatcatagaatatgtacttttttgtctggcttctttcactcagcataatta-ttttgagattaatctatgttgttgtttgcataaatatgtcattcctgtttattgctaaataatattcaattgaatggctatatcatgatttgttgttagccatttgaattttttccagtttttggcttttacaaacaaagctgctctgaacatttgtgtacaggtttttacatggatatatatttccttttctcttgggaatttcct-aagagtggaacggctggatcatattgtaagcatgtgtttaactgcacccaccatgagagtgccatttcctctacattctcaccaatacttgttatggtcagtctttttcactgaaaccattctattaggttggtacaaaagtaattgcagt-tttgctctcaaaagtaatggcaaaaaccacaattacttttgcacacacctaataatatgtgagtaatgt------gtgtgtgtgtgtgtgtgtgAattctagctcctttgctagaattttaaaattagcttgctaatttgtacaaaaaaatgctccctgatatttttattaagattgtgttgcatatagggatcaaacc-gggagaactgccatgttaaatattgactattct i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4561970 645 + 163208435 TTCTTAGTGTTTtaactagaatcatagaatatgtacttttttgtctggcttctttcacttagcataatta-ttttgagattaatctatgttgttatttgcacaaatatttcattcctgtttatcgctaaataatattcaattgaatggctatatcatgatttgttgttagccatttgaattttttccagtttttggctattacaaacaaagctgctctgaacatttgtgtacaagtttttacatggatatatatttccttttctcttgggaatttcct-aagagtggaatggctggatcatatcgtaagcatgtgtttaactgcacccaccgtaagagtgccatttcctctacattctcaccaatacttgttatggtcagtctttttcacagaaaccattctattaggttggtacaaaagtaattgcagt-tttactcccaaaagtaatggcaaaaaccgcaattacttttgcaccaacctaataatatgtgagtgttgt------gTGTGTGTG---------Aatttttagctcctttgctagaattttaaaattagcttgctaatttgtacaaaaaaatgcttcctgatattttgattaagattgtgttgaatatagggatcaaacc-aggagaactgacatgttaaatattgactattct i nomLeu3.chr2 M 53032 C 0 s rheMac8.chr6 5742414 645 - 180051392 ttcttagtgttttagctagaatcatagaatatgtacttttttgtctggcttctttcactcagcataatta-ttttgagattaatcgatgttattgtttgcataaatatttcattcctgtttattgctaaataatattcaattgaatggctacatcatgatttgttgatagccatttgaattttttctagtttttggctataacaaacaaagctgctctgaacatttgtgtacaagtttttacatgggtgtgtatttcctttcctcttgggaatttcct-aagagtggaatggctggatcatattgtaagcatgtgtttaactgca-ccaccatgagagtgccgtttcctctacattctcaccaatacttgttatggtcagtctttttcactgaaaccattctgttaggttgctacaaaagtacttgtggtgtttgctctcaaaagcaatggcaaaaaccgcaattacttttgcaccaacc---taatatgtgaattgtgt------gtg----tatgtgtgtgtgAATTCTAGCTCCTTTGGTAGaattttaaaattagcttgctaatttgtacagaaaaa--cttcctgatattttgattaagattgtgttgcatatagggatcaaagc-gggagaactgacgtgttaaatattgacggttct i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5928868 643 - 181584905 ttcttagtgttttagctagaatcatagaatatgtacttttttgtctggcttctttcactcagcataatta-ttttgagattaatcgatgttattgtttgcataaatatttcattcctgtttattgctaaataatattcaattgaatggctacatcatgatttgttgatagccatttgaattttttctagtttttggctataacaaacaaagctgctctgaacatttgtgtacaagtttttacatgggtgtgtatttcctttcctcttgggaatttcct-aagagtggaatggctggatcatattgtaagcatgtgtttaactgca-ccaccatgagagtgccgtttcctctacattctcaccaatacttgttatggtcagtctttttcactgaaaccattctgttaggttgctacaaaagtacttgtggtgtttgctctcaaaagcaatggcaaaaacctcaattacttttgcaccaacc---taaTATGTGAGTTTTGT------GTG------TGTCTGTGTGAATTCTAGCTCCTTTGGTAGaattttaaaattagcttgctaatttgtacagaaaaa--cttcctgatattttgattaagattgtgttgaatatagggatcaaagc-gggagaactgacgtgttaaatattgacggttct i macFas5.chr6 C 0 C 0 s chlSab2.chr23 4742982 641 - 82825804 ttcttagtgttttagctagaatcatagaatatgtgcttttttgtctggcttctttcactcagcataatta-ttttgagattaatcgatgttattgtttgcataaatatttcattcctgtttattgctaaataatattcaattgaatggctacatcatgatttgttgatagccagttgaattttttctagtttttggctattacaaacaaagctgctctgaacatttgtgtacaagtttttacatgggtgtgtatttcctttcctcttgggaatttcctaaagagtggaatggctggatcatattgtaagcatgtgtttaactgca-cccccatgagagtgccgtttcctctacattctcaccaatacttgttatggtcagtctttttcactgaaaccattctattaggttggtacaaaagtacttgcagtgtttgctctcaaaagcaatggcaaaaaccgcaattacttttgcaccaacc---taGTATGTGAGGGAGGT------GTG----------TGTGTGAATTCTAGCTCCTTTGGTAGaattttaaaattagcttgctaatttgtacagaaaaa-gattcctgatattttgattaagattgtgttgaatatagggaccaaagc-gggagaactgacgtgttaaatattgacggttct i chlSab2.chr23 C 0 C 0 s saiBol1.JH378186 2199457 648 + 10068113 tccttagtgttttagatagaatcatagaatatggacttttttgtctggcttctttcactcagcataattatttttgagattaatctatg---ttgcttgcataaatatttcattcctttttattgctaaataatattcagttgaatggccatatcataatttgttgatggccacctgaattattttcag-ttttggctattacaaacacagctgctctgaacatttgtgtacaggttttcgtatgggtatatattttcttttatcttgggaatttcct-aagagcggaatggctggatcacatagtaagcgtatgtttaactgca-ccgctgtgagaatgccatttcctctgcattctcaccaatacttgttatggtcagtctttttcatttaacccattctattaggttggtgcaaaagtcattgcggtttttgctctagaaagtaatggcaaaaactgcaatgacttttgcaccaacctaataatatgtgtgtaatTT---------TGTGTGAGTGTGTGTGAattctagctcctttgccagaattttaaaattagcttgccaatttatacaaaaaaa-gcttcccgatattttgattaagattgtgttgaatatagggatcaatctggggagaactgacatgttaaatattgactatttt i saiBol1.JH378186 C 0 I 6174 e cebCap1.NW_016107999v1 53187 6641 - 709587 I e mm10.chr13 65979384 6914 - 120421639 I e calJac3.chr2 64069878 9594 + 204313951 I e otoGar3.GL873522 1227194 7559 + 48283576 I e cerAty1.NW_012007035v1 1778975 7234 - 21434487 I e macNem1.NW_012018466v1 955967 7426 - 16193990 I e canFam3.chr4 37170079 847 + 88276631 I e proCoq1.NW_012152163v1 758448 6575 - 940639 I e dasNov3.JH562710 245691 6502 - 960158 I e aotNan1.NW_018501968v1 1154068 4267 - 2246441 I e colAng1.NW_012115755v1 1728487 8080 - 2415367 I e manLeu1.NW_012103943v1 237223 16701 + 2521317 I a score=6106121.000000 s hg38.chr5_KI270795v1_alt 43270 2621 + 131892 ggccgagcacggtggctcacgccggtaatcccagcgctttgggaggccgaggcaggtggatcacctgaggtcaggagtttgagaccagcctgcaaaaccctgtctctactgaaaatacaaaatattagccagacatggtggcgggtgcctgtaatcccagctcttcgggaggctgaggcaggagaatcgcttgaccccaggaggcggaggttgcagtgagtcaagatcgtgccactgggcaacaagggtgaaactccatctcaa-aaaaaaaaa--aa-------aaaaaaaaaaaaaggactattctgctattctgacccaataaccaggtatatctttctacttgtttgtctttgagagcttctttcagcaaggtttcatagtttagagtgtactagtcttctgcatcttttgtcaaatg--tctgtttcacatttttaatgttttataaa-tgatattttaaaaagttgtaatttctgattgtttctgacatacaaaaatataatctgccctggtctgcacgtcttgtatcctgcaatcttgcccaaagtcatttattcatactagtagctttttttt-----gcatttctttggattttctacatagacaaatacagttttgcttcttcctttctaatcaggatgccttttatgta-tctttttccttttattactggctacgaactccagaacaatgtttaataggagtggtgagagcttgtcttgtcttgtttctgatctcaggaggaaagcattcagtctttcatcagtaagtgtgattttttgttgtaagtggtttgcaga-------tttttttttaatcgggttaggttcctttctgttcctagttttctaagagattttttctaaaaaatcaggaatgggcattgaa-tttttttgaatgcttttt---tctgtgtaagtgatcatatggtttctgttttgtagttactattgtaagttaaacattgattgatttttctaataatgaccaacctttaatttctgacacatagtcagtccaattggttattatgcttttagtatgttgtcagattcaaattgctaaaatttgtttagactttttttccctatctgtatttatgagcattattggtctgtagttttcttttctcacaatgtctttttctggttttggtatctgggtaatgcttgcttcatggaacaaattgggggaatatttgctcctcttcaa-ttttttggaagagtttgtgtagaactggcgttttttcttcccctaaatatttgataacattcacgatgaagtgatgtggactggaagttttctttgtgggaagg-ttttaactacaactgcaacttctaaaatagataaggggctattccccttgactactgcttcttaagtgagcttttgtagtttgtatctttcatgaatttgtctctt-----taagttttcagatttattggcataaagagtacacagtattctcttatccttttaatatctatagaatctgtactgatggcacctctcttatttttgatcttgataatttttattttctttccttttttcctgatctatctggctagaaatttatcaattttatttatctttttaaacaactagctttcattttcattgattgtctgtattgtttttctattttgtagtttattgattttcattctcactattttctttgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatTGCTGttattatttgagtcagggtcttgctctgttgcccaggctggagtgcagtggtgtgatcttggctcgctgcaacctccgcctcctgggttcaagtgattctcgtgcctcagcctcccgagtagctgggactacaggtgcatgccaccacaactggctaatttttgtatttttaatagaaacggtgtttcatcatgttggccaggctggtctagaactcctgacctcaagtgatctgcccgtcttgg-cctcccagtgtgctgggattacaggcatgagccactgcacccagcctctttgtttattttaaatttaatatctcttcttattctagttttgtaaagggaaagttggactcactgatttaagatgtgattattttcttttcttcttttttcttttgagacaggttcttgctctgttacccaaactggagtacagct--cactgtagcctcaacctcctgggctaaagcgatcctcccatctcagcctcctgagtagctgagactacaggcgcatgccaccatgcccagctaatttttaaagca-ttttttgtatgctttatg---ctctgtgttggccaggctgattgctaattcctgggctcaagtgatctgccttggcctcccaaagtgttgggattacaggcaagagccactgcacccagcagacctttattattttctaatataggcatttagtgctataaatttcccactaaatgatgtgttagcagcctcccacagattttgatatgttgtattttcactttcattcagtccaaaatataagtgtcttttgacttttttctttgatccgtgggttattttgaagtatggtatttaatttcccaacacttgggggttttccagagatctttttgttgctgatttttaattaattatatttttgt s panTro5.chr5 5291841 2592 - 181907262 ggccgagcgcggtggctcacgccggtaatcccagcactttgggaggccgaggcaggtggatcacctgaggtcaggaattcgagaccagcctgcaaaaccctgtctctactgaaaatacaaaatattagccagacgtggtggcgggtgcctgtaatcccagctcttcgggacgctgaggcaggagaatcgcttgaccccaggaggcggaggttgcagtgagtcaagatcgtgccactgggcaacaagggtgaaactccatctc-------aaaaa--aa-------aaaaaaaaaaaaagga--------ctattctgacccaataaccaggtatatctttctacttgtttgtctttgagagcttctttcagcaaggtttcatagtttagagtgtactagtcttctgcatcttttgtcaaatg--tctgtttcacatttttaatgttttataaa-tgatattttaaaaagttgtaatttctgattgtttctgacgtacaaaaatataatctgccctggtctacacgtcttgtatcctgcaatcttgcccaaagtcatttattcgtactagt-gctttttttt-----gcatttctttggattttctacatagacaaatacagttttgcttcttcctttctaatcaggatgccttttatgta-tctttttccttttattactggctacgaactccagaacaatgtttaataggaggggtgagagcttgtcttgtcttgtttctgatctcaggaggaaggcattcagtctttcatcagtaagtgtgattttttgttgtaagtggtttgcaga-----tttttttttttaatcgggttaggttcctttctgttcctagttttctaagagattttttctaaaaaatcaggaatgggcattgaa-tttttttgaatgctttttatgtctgtgtaagtgatcatatggtttctgttttgtagttactattgtaagttaaacattgattgatttttctaataatgaccaacctttaatttctgacacatagtcagtccagttggttattatgcttttagtatgttgtcagattcaaattgctaaaatttgtttagactttttttccctatctgtatttatgagcattattggtctgtagttttcttttctcacaatgtctttttctggttttggtatctgggtaatgcttgcttcatggaacaaattgggggaatatttgctcctcttcaa-ttttttggaagagtttgtgtagaactggcgttttttcttcccctaaatatttgataacattcacgatgaagtgatgtggactggaaattttctttgtgggaagg-tttaaactacaactgcaacttctaaaatagataaggggctattccccttgactattgcttcttaagtgagcttttgtagtttgtatctttcatgaatttgtctctt-----taagttttcagatttattggcataaagagtacacagtattctcttatccttttaatatctatagaatctgtactgatggcacctctcttatttttgatcttgataatttttattttctttccttttttcctgatctatctggctagaaatttatcaattttatttatctttttaaacaactagctttcattttcattgattgtctgtattgtttttctattttgtagtttattgattttcattctcactattttctt---------------tgatgatgatgatgatgatgatgatgattattattgttgttgttatttgagtcagggtcttgctctgttgcccaggctggagtgcagtggtgtgatcttggctcgctgcaacctccgcctcctgggttcaagtgattctcgtgcctcagcctcccgagtagctgggactacaggtgcatgccaccacaactggctaatttttgtatttttaatagaaacggtgtttcaccatgttggccaggctgctctagaactcctgacctcaagtgatctgcccgtcttgg-cctcccagtgtgctgggattacaggcatgaggcactgcacccagcctctttgtttattttaaatttaatatctcttcttattctagttttgtaaagggaaagttggactcactgatttaagatgtgattattttcttttcttcttttttcttttgagacaggttcttgctctgttacccaaactggagtacagct--cactgtagcctcaacctcctgggctaaagtgatcctcccatctcagcctcctgagtagctgagacttcaggcgcatgccaccatgcccagctaatttttaaagca-ttttttgtatgctttatg---ctctgtgttggccaggctgattgctaattcctggactcacgtgatctgccttggcctcccaaagtgttgggattacaggcaagagccactgcacccagcagacctttattattttctaatataggcatttagtgctataaatttcccactaaatgatgtgttagcagcctcccacagattttgatatgttgtattttcact----ttcagtccaaaatataagtgtcttttgacttttttctttgatccgtgggttattttgaagtatggtatttaatttcccaacacttgggggttttccagagatctttttgttgctgatttttaattaattctatttgtgt i panTro5.chr5 C 0 C 0 s panPan2.chr5 5554147 2583 - 183735486 ggccgagcgcggtggctcacgccggtaatcccagcactttgggaggccgaggcaggtggatcacctgaggtcaggaattcgagaccagcctgcaaaaccctgtctctactgaaaatacaaaatattagccagacgtggtggcgggtgcctgtaatcccagctctttgggaggctgaggcaggagaatcgcttgaccccaggaggcggaggttgcagtgagtcaagatcgtgccactgggcaacaagggtgaaactccatctc----------aa--aa-------aaaaaaaaaaaaggaa--------ctattctgacccaataaccaggtatatctttctacttgtttgtctttgagagcttctttcagcaaggtttcatagtttagagtgtactagtcttctgcatcttttgtcaaatg--tctgtttcacatttttaatgttttataaa-tgatattttaaaaagttgtaatttctgattgtttctgacgtacaaaaatataatctgccctggtctacacttcttgtatcctgcaatcttgcccaaagtcatttattcgtactagt-gctttttttt-----gcatttctttggattttctacatagacaaatacagttttgcttcttcctttctaatcaggatgccttttatgta-tctttttccttttattactggctacgaactccagaacaatgtttaataggagtggtgagagcttgtcttgtcttgtttctgatttcaggaggaaggcattcagtctttcatcagtaagtgtga-tttttgttgtaagtggtttgcaga------ttttttttttaatcgggttaggttcctttctgttcctagttttctaagagattttttctaaaaaatcaggaatgggcatttaa-tttttttgaatgctttttatgtctgtgtaagtgatcatatggtttctgttttgtagttactattgtaagttaaacattgattgatttttctaataatgaccaacctttaatttctgacacatagtcagtccagttggttattatgcttttagtatgttgtcagattcaaattgctaaaatttgtttagactttttttccctatctgtatttatgagcattattggtctgtagttttcttttctcacaatgtctttttctggttttggtatctgggtaatgcttgcttcatggaacaaattgggggaatatttgctcctcttcaa-ttttttggaagagtttgtgtagaactggcattttttcttcccctaaatatttgataacattcacgatgaagtgatgtggactggaaattttctttgtgggaagg-tttaaactacaactgcaacttctaaaatagataaggggctattccccttgactattgcttcttaagtgagcttttgtagtttgtatctttcatgaatttgtctctt-----taagttttcagatttattggcataaagagtacacagtattctcttatccttttaatatctatagaatctgtactgatggcacctctc---tttttgatcttgataatttttattttctttccttttttcctgatctatctggctagaaatttatcaattttatttatctttttaaacaactagctttcattttcattgattgtctgtattgtttttctattttgtagtttattgattttcattctcactattttctt---------------tgatgatgatgatgatgattattattattattattgttgttgttatttgagtcagggtcttgctctgttgcccaggctggagtgcagtggtgtgatcttggctcgctgcaacctccgcctcctgggttcaagtgattctcgtgcctcagcctcccgagtagctgggactacaggtgcatgccaccacaactggctaatttttgtatttttaatagaaacggtgtttcaccatgttggccaggctgctctagaactcctgacctcaagtgatctgcccgtcttgg-cctcccagtgtgctgggattacaggcatgaggcactgcacccagcctctttgtttattttaaatttaatatctcttcttattctag-tttgtaaagggaaagttggactcactgatttaagatgtgattattttcttttcttcttttttcttttgagacaggttcttgctctgttacccaaactggagtacagct--cactgtagcctcaacctcctgggctaaagcgatcctcccatctcagcctcctgagtagctgagacttcaggcgcatgccaccgtgcccagttaatttttaaagca-ttttttgtatgctttatg---ctctgtgttggccaggctgattgctaattcctggactcaagtgatctgccttggcctcccaaagtgttgggattacaggcaagagccactgcacccagcagacctttattattttctaatataggcatttagtgctataaatttcccactaaatgatgtgttagcagcctcccacagattttgatatgttgtattttcact----ttcagtccaaaatataagtgtcttttgacttttttctttgatccgtgggttattttgaagtatggtatttaatttcccaacacttgggggttttccagagatctttttgttgctgatttttaattaattctatttttgt i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1685985 2578 + 3967317 ggctgagcgcggtggctcacgccggtaatcccagcactttgggaggccgaggcaggtgggtcacctgaggtcaggagttcgagaccagcctgcaaaaccctgtctctactgaaaatacaaaatattagccagacgtggtggcgggtgcctgtaatcccagctcttcaggaggctgaggcaggagaatcgcttgacctcaggaggtggaggttgcagtgagtcaagatcgtgccactgggcaacaagggtgaaactccatctc------------------------------aaaaaagga--------ctattctgacccaataaccaggtatatctttctacttgtttgtctttgagagcttctttcagcaaggtttcatagtttagagtgtactagtcttctgcatcttttgtcaaatg--tctgtttcacatttttaatgttttataaa-tgatattttaaaaagttgtaatttctgattgtttctgacatacaaaaatataatctgccctggtctacacgtcttgtatcctgcaatcttgcccaaagtcatttattcgtactagtagctttttttt-----gcatttctttggattttctacatagacaaatacagttttgcttcttcctttctaatcaggatgacttttatgta-tctttttccttttattactggctatgaactccagaacaatgtttaataggagtggtgagagcttgtcttgtcttgtttctgatctcaggaggaaagcattcagtctttcatcagtaagtgtgattttttgttgtaagtggtttgcaga----ttttttttttttaatcgggttaggttcctttctgttcttagttttctaagggattttttctaaaaaatcaggaatgggcattgaattttttttgaatgctttttatgtctgtgtaagtgatcatatggtttctgttttgtagttactattgtaagttaaacattgattgatttttctaataatgaccaacctttaatttctgacacatagtcagtccaattggttgttatgcttttagtatgttgtcagattcaaattgctaaaatttgtttagactttttttccctatctgtatttatgagcattattggtctgtagttttcttttcgcacaatgtctttttctggttttggtatctgggtaatgcttgcttcatggaacaaattgggggaatatttgctcctcttcaa-ttttttggaagagtttgtgtagaactggtgttttttcttcccctaaatatttgataacattcacgatgaagtgatgtggactggaaattttctttgtgggaaggtttttaactacaactgcaacttctaaaatagataaggggctattccccttgactattgcttcttaagtgagcttttgtagtttgtatctttcgtgaatttgtctctt-----taagttttcagatttattggcataaagagtacacagtattctcttatccttttaatatctatagaatctgtactgatggcacctctcttatttttgatcttgataatttttattttctttccttttttcctgatctatctggctagaaatttatcaattttatttatctttttaaacaactagctttcattttcattgattgtctgttttgtttttctattttgtagtttattgattttcattctcactattttctt------------------------tgatgatgatgattattattattgttgttgttattatttgagtcaaggtcttgctctgttgcccaggctggagtgcagtggtgtgatcttggcttgctgcaacctctgcgtcctggattcaagtgattctcgtgcctcagcctcccgagtagctgggactacaggtgcatgccaccacaactggctaatttttgtatttttaatagaaacggtgtttcaccatgttggccaggctggtctagaactcctgacctcgagtgatctgcccatcttggccctcccagtgtgctgggattacaggcatgagccactgcacccagcctctttgtttattttaaatttaatatctcttcttattctagttttgtaaagggaaagttggactcactgatttaagatgtgattattttcttttcttcttttttcttttgagacaggttcttgctctgttacccaaactggagtacggct--cactgtagcctcaacctcctgggctaaagcgatcctcccatctcagcctcctgagtagctgagactacaggcacatgccaccatgcccacctaatttttaaagca-ttttttgtatgctttatg---ctctgtgttggccaggctgattgctaattcctgggctcaggtgatctgccttggcctcccaaagtgttgggattacaggcaagagccactgcacccagcagacctttattattttctaatataggcatttagtgctataaatttcccactaaatgatgtgttagcagcctcccacagattttgatatgttgtattttcactttcattcagtccaaaatataagtgtcttttgacttttttctttgatccgtgggttattttgaagtatggtatttaatttcccaacacttgggggttttccagagatctttttgttgctgatttttaattaattctatttttgt i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4562615 2580 + 163208435 ggccgagcatggtggttcacaccggtaaccccagtactttgggaggctgagg-------------------caggagttcgagaccagcctgtgaaaccctgtctctactaaaaatacaaaaaattagccaggcatggtggcaggcgcctgtaatcccagctcttcgggaggctgaggcaggagaatcacttgaccccgggaggtggaggttgcagtgagtcaagatcacgccactgggcaacaagggtgaaactccatctcaa-aaaacaaaa--aacaacaacaacaaaaaacaaaaga--------ctattctgacccaatagtcaggtgtatctttctacttacttgtctttgagagcttttttcagcaaggtttcgtagtttagagtgtactagtcttctgcatcttttgtcaaatgtctctgtttcacatttttaatgttttataaagtgatattttaaaaagttgtaatttctgattgtttctggcatacaaaaatataatttgccctagtctacacatcttgtatcctgcaattttgcccaaagccattcattagtactagtagcttttttttttttctcatttctttggattttctacatagacaaatacagttttacttcttcctttctaatcaggatgccttttatgtattttttttccttttattactggctgtgaactccagaacaatgtttaataggaatggtgagagcttgtcttgtcttgcttctgatctcaggaggaaagcatttagtctttcatcactaagtgtga-tttttgttgtaggtggtttgcaga---------tttttaaaatcaggttaagttcctttctattcctagttttctaagagattttttctaaaaaatcaggaatgggcattgaa-tttttttgaatgctttttatgtctgtgtaagtgatcatatggtttctgttttttagttactattgtgagtt--acattgattgatttttctaataatgaccaagctttaatttctgacacat----agtccaattggttattatccttttagtatgttgtcagattcaaattgataaaatttgtttagactttttttccctatctgtatttatgagcgttaatggtctgtagttttcttttctcacaatgtctttttctggttttggtatgtgggtaatgcttgcttcatggaacaaattggggggatatttgttcctcttcaa-ttttttggaagagtttgtgtagaactggcattttttcttcccctaaatatttgataacattca-gacgaagtgatgtggactggaagttttctttgtgggaagg-ttttaactacaactgcaacttctaaaatagataaggggctattccccttgactattgcttcttaagtgaacttttgtagtttgtatctttcatgaatttgtctctt-----taagttttcagatttattggcatgaagagttcacagtattctcttatccttttcatatctatagaatctgtactgatggcacctctcttatttttgatcttgataatttttactttctttcctttttccctgatctatctggctagaagtttatcaattttatttatctttttaaacaactagcttttatttttattgattttctgtattgtttttctattttgtagtttattggttttcattctcactattttctt------------------------tgatgatggtgatgatgatgattattgttgttattatttgagacagggtcttgctctgtcgcccaggctagagtgcagttgtgtgatcttggctcactgcaacctccgcctcctgggttcaagtgattctcgtgcctcagcctcccgagtagctgggactacaggtgcatgccaccacaactggctaattcttgtatttttagtagaaacggtgtttcaccatgttggccaggcaggtctagaactcctgacctcaagttatctgcctgccttgg-cctcccaatgtgctgggattacaggcatgagccaccgcacccagcttctttgtttattttaaatttaaaatctcttcttattctagttttgtaaagggaaagttggactcactgatttaagatctgatgattttcttttcttcttttttcttttgagacaggttcttgctctgttacccaaactggagtacagct--cactgtagcgtcaacctcctgggctgaagcgatcctcccatctcagcctcctgagtagctgagactacaggtgcatgccaccatgcccagctaatttttaaagcatttttttgtatgctttatg---ctctgtgttggccaggctgattgctagttcctgggctcaagtgatctgccccggcctcccaaagtgttaggattacaggcaagagccactgcacccagcagacctttattattttctaatataggcatttagtgctataaatttcccactaaatgatgtgttagcagcctcccacagattttgatatgttgtattttcactttcattcagtccaaaatataagtgtcttttgacttttttctttgatccgtgggttattttgaagtgtggtgtttaatttctcaacacttgggggttttccagagatctttttgttgctgatttttaattaattctgttttgat i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5743059 2601 - 180051392 ggccgagcatggtggctcacaccggtaatcccagcattttgggaggctgaggcaggtggatcccctgaggccaggagttcgagaccagcctgcgaaaccccatctctactaaaaatacaaaaaattagccaggcatggtggcaggcacctgtaattccagccctttgggaggctgcggcaggagaatcgcttgagcccaggaggcggtggttgcagttagccaagattgtgccactgggcgacaagggtgaaactccatctcagtaaaaaaaag--aa-------aaaaaaaaaaaaagga--------ctattctgacccaataaccaggtatatctttctacttgcttgtctttgagagcttctttcagcaaggtttcatagtttagagtgcactagtgttctgcatcttttatcagatatctctgtttcacatttttaatgttttataaaatcatatttttaaaagatgtaatttctgattgtttctggcatacaaaaatataattttccctactctacacatcttatatcctgcaatcttgcccaaagtcatttattagtactagtagctttttttt-----gcatttctttggattttctacatagacaaatacagttttacctcttcctttctaatcaggctgccttttatgta-tttttctccttttattactggctacgaactccagaacaatgtttaaaagaagtggtgagagcttgtcttgtcttgtttctgatctcaggaggaaagcattcagtctttcatcactaagtgtgattttttgttgtaggtggtttgcaga----tttttttttttta------ttaggttcctttctattcctagttttctaagagattttttctaaaaaatcaggaacgggcattgaa-tttttttgaatactttttatgtctctgtaagtgatcatatggtttctgttttttagttactattgtgagtt--acattgatcgatttttctaataatgaccaccctttaatttctgacacatagtcagtccaattggttattatccttttaatacattgtcagattcaaattgctaaaatttgttcagactttttttccctatctgtatttatgagcattattggtctgtagttttcttttctcacaatgtgtttttctggttttggtatctgggtaatgcttgcttcatggaacaaattggggaaatatttgctcctcttcaa-ttttttggaagagtttgtgtggaactggcattttttcttcccctaaatatttgataacattcacgatgaagtgatgtggactgaaagttttctttgtgggaagg-tttcaactacagctgcaacttctaaaatagataaggggctattcctcttaaccattgcttcttaagtgagcttttgtagtttgtatctttcatgaatttgtctatttaatctaagttttcagatttatttgcataaagagttcacaatattctcttatccttttaatatctatagaatctatagtgatggcagctctcttatttttgatcttgataatttttattttctttcccttttccctgatctatctggctagaagtttatcagttttatttgtctttttaaacaactagcttttatttttattgattttctgtattgtttttctattttgtagttgattgattttcattctcactattttctt------------------------tgataatgatgatgatgattattattattgttattatttgagacagggtcttgctctgttgtccaggctagagtgcagtggtgtgatcttggctcactgcaacctctgccttctggtttcaactgattctcatgcctcagcctcccgagtagctgggactacaggtgcacgccaccacaactggctaatttttgtatttttagtagtaatggtgtttcaccatgttggccagactggtctagaactcctgacttcaagtgatctgcccgcctcag-cctcccagtgtgctgggattgcaggcatgagccgctgcacccggcctctttgtttattttaaatttaatatctcttcttattctagttttgtaaagggaaagttgaactcactgatttaatatctgattcttttcttttcttcttttttcttttgagataggttcttgctctgttacccaaactggagtacagctcacactgtagcctcaacctcttgggcagaagtaatcctcccatctcagcctcctgagtagctgagactacaggcacatgccaccatgcccagctaatttttaaagca-ttttttatagagacaaggtctcactatgttggccaggctgatttctaattcctgggctcgagtgatctgcctcggcctcccaaagtgttgggattacaggcatgagccactgcaaccagcagacctttattattttctaatataggcatttagtgctataaatttcccactaaatgatatgttagcagcctcccacagattttgatatgttgtattttcactttcattcagttcaaaatataaatgtcttttgacttttttctttgatccgtgggttattttgaagtatggtatttaatttcccaacacttgggggttttccagagatctttttgttgctgatttttaattaactctattttggt i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5929511 2598 - 181584905 ggccgagcatggtggctcacaccggtaatcccagcattttgggaggctgaggcaggtggatcccctgaggccaggagttcgagaccagcctgcgaaaccccatctctactaaaaatacaaaaaattagccaggcatggtggcaggcgcctgtaattccagccctttgggaggctgcggcaggagaatcgcttgagcccaggaggcggaggttgcagttagccaagattgtgccactgggcgacaagggtgaaactccatctcagtaaaaaaaag--aa-------aaaaaaaaaaaaagga--------ctattctgacccaataaccaggtatatctttctacttgcttgtctttgagagcttctttcagcaaggtttcatagtttagagtgcactagtgttctgcatcttttatcagatatctctgtttcacatttttaatgttttataaaatcatatttttaaaagatgtaatttctgattgtttctggcatacaaaaatataattttccctactctacacatcttatatcctgcaatcttgcccaaagtcatttattagtactagtagctttttttt-----gcatttctttggattttctacacagacaaatacagttttacctcttcctttctaatcaggatgccttttatgta-tttttctccttttattactggctacaaactccagaacaatgtttaaaagaagtggtgagagcttgtcttgtcttgtttctgatctcaggaggaaagcattcagtctttcatcactaagtgtgattttttgttgtaggtggtttgcaga----tttttttttttta------ttaggttcctttctattcctagttttctaagagattttttctaaaaaatcaggaacgggcattgaa-tttttttgaatactttttatgtctctgtaagtgatcatatggtttctgttttttagttactattgtgagtt--acattgatcgatttttctaataatgaccaccctttaatttctgacacatagtcagtccaattggttattatccttttagtacattgtcagattcaaattgctaaaatttgttcagactttttttccctatctgtatttatgagcattattggtctgtagttttcttttctcacaatgtgtttttctggttttggtatctgggtaatgcttgcttcatggaacaaattgggggaatatttgctcctcttcaa-ttttttggaagagtttgtgtggaactggcattttttcttcccctaaatatttgataacattcacgatgaagtgatgtggactgaaagttttctttgtgggaagg-tttcaactacagctgcaacttctaaaatagataaggggctattccccttaaccattgcttcttaagtgagcttttgtagtttgtatctttcatgaatttgtctatttaatctaagttttcagatttattcgcataaagagttcacaatattctcttatccttttaatatctatagaatctatagtgatggcagctctcttatttttgatcttgataatttttattttctttccctttttcctgatctatctggctagaagtttatcagttttatttgtctttttaaacaactagcttttatttttattgattttctgtattgtttttctattttgtagtttattgattttcattctcactattttctt------------------------tgataatgatgatgatg---attattattgttattatttgagacagggtcttgctctgttgtccaggctagagtgcagtggtgtgatcttggctcactgcaacctctgccttctggtttcaactgattctcatgcctcagcctcccgagtagctgggactacaggtgcacgccaccacaactggctaatttttgtatttttagtagaaatggtgtttcaccatgttggccagactggtctagaactcctgacttcaagtgatctgcccgcctcag-cctcccagtgtgctgggattgcaggcatgagccgctgcacccggcctctttgtttattttaaatttaatatctcttcttattctagttttgtaaagggaaagttgaactcactgatttaatatctgattcttttcttttcttcttttttcttttgagataggttcttgctctgttacccaaactggagtacagctcacactgtagcctcaacctcttgggcggaagtaatcctcccatctcagccttctgagtagctgagactacaggcacatgccaccatgcccagctaatttttaaagca-ttttttatagagacaaggtctcactatgttggccaggctgatttctaattcctgggctcgagtgatctgcctcggcctcccaaagtgttgggattacaggcatgagccactgcaaccagcagacctttattattttctaatataggcatttagtgctataaatttcccactaaatgatatgttagcagcctcccacagattttgatatgttgtattttcactttcattcagttcaaaatataaatgtcttttgacttttttctttgatccgtgggttattttgaagtatggtatttaatttcccaacacttggggattttccagagatctttttgttgctgatttttaattaactctattttggt i macFas5.chr6 C 0 C 0 s chlSab2.chr23 4743623 2599 - 82825804 ggccgagcgtggtggctcacactggtaatcccagcattttgggaggctgaggcaggtggatcacctgaggccaggagttcaagaccagcctgcgaaaccccatctctactaaaaatacaaaaaattagccaggcatggcggcaggcgcctgtaatcccagcccttcgggaggctgcggcaggagaatcgcttgagcccaggaggcggaggttgcagtgagccaagattgtgccactgggcgacaagggtgaaactccatctcagtaaaaaaaagaaaa-------aaaaaaaaaaaaagga--------ctattctgacccaataaccaggtatatctttctacttgtttgtctttgagagcttctttcagcaaggtttcatagtttagagtgtactagttttctgcatcttttatcagatatctctgtttcacatttttaatgttttataaaatcatatttttaaaagatgtaatttctgattgtttctggcatacaaaaatataattttccctactctacacatcttatatcctgcaatcttgcccaaagtcatttattagtactagtagctttttttt-----gtatttctgtggattttctacatagacaaatacagttttacctcttcctttctaatcaggatgccttttatgta-tttttttccttttattactggctacaaactccagaacaatgtttaaaaggagtggtgagagcttgtcttgtcttgtttctgatctcaggaggaaagcattcagtctttcatcactaagcgtgattttttgttgtaggtggtttgcagatttttttttttttttta------tcaggttcctttctattcctagttttctaagagattttttctaaaaaatcaggaatgggcattgaa-ttcttttgaatacttcttatgtctctgtaagtgatcacatggtttctgttttttagttactattgtgagtt--acattgatcgatttttctaataatgaccaccctttaatttctgacacatagtcagtccaattggttattatccttttagtacattgtcagattcaaattgctaaaatttgtttagactttttttccctatgtgtatttatgagcattattggtctgtagttttcttttctcacaatgtgtttttctggttttggtatctgggtaatgcttgcttcatggaacaaattgggggaatatttgctcctcttcaatttttttggaagagtttgtgtggaactggcattttttcttcccctaaatatttgataacattcacgatgaagtgatgtggactgaaagttttctttgtgggaagg-tttcaactacagctgcaacttctaaaatagataaggggctattccccttaaccattgcttcttaagtgagcttttgtagtttgtatctttcatgaatttgtctatttaatctaagttttcagatttattcgcataaagagttcacaatattctcttatccttttaatatctatagaatctatagtgatggcagctctc--atttttgatcttgataatttttattttctttccctttttcctgatctatctggctagaagtttatcaattttatttatctttttaaacaactagcttttatttttattgattttctgtattgtttttctattttgtagtttattgattttcatt----ctattttctt------------------------tgataatgatgatgatg---attattattgttattatttgagacagggtcttgctctgttgtccaggctagagtgcagtggtgtgatcttggctcactgcaacctctgccttctggtttcaactgattctcatgcctcagcctcctgagtagctgggactacaggtgcacgccaccacaactggctaatttttgtatttttagtagaaatggtgtttcaccatgttggccagactggtctagaactcctgacttcaagtgatctgcccgcctcgg-cctcccagtgtgctgggattacaggcatgagccgctgcacccggcctctttgtttattttatatttaatatctcttcttattctagttttgtaaagggaaagttgaactcactgatttaatatctgattcttttcttttcttcttctttcttttgagataggttcttgctctgttacccaaactggagtacagctcacactgtagcctcaacctcttgggcggaagtgatcctcccatctcagcctcctgagtagctgagactacaggcacatgccaccatgcccagctaatttttaaagca-ttttttgtagagacaaggtctcactatgttggccaggctgatttctaattcctgggctcgagtgatctgcctcggcctcccaaagtgttgggattacaggcatgagccactgcagccagcagacctttattattttctaatataggcatttagtgctataaatgtcccactgaatgatgtgttagcagcctcccacagatttcgatatgttgtattttcactttcattcagttcaaaatataaatgtcttttgacttttttctttgatccgtgggttattttgaagtatggtatttagtttcccaacacttgggggttttccagagatctttttgttgctgatttttaattaactctattttggt i chlSab2.chr23 C 0 C 0 e cebCap1.NW_016107999v1 53187 6641 - 709587 I e saiBol1.JH378186 2200105 6174 + 10068113 I e mm10.chr13 65979384 6914 - 120421639 I e calJac3.chr2 64069878 9594 + 204313951 I e otoGar3.GL873522 1227194 7559 + 48283576 I e cerAty1.NW_012007035v1 1778975 7234 - 21434487 I e macNem1.NW_012018466v1 955967 7426 - 16193990 I e canFam3.chr4 37170079 847 + 88276631 I e proCoq1.NW_012152163v1 758448 6575 - 940639 I e dasNov3.JH562710 245691 6502 - 960158 I e aotNan1.NW_018501968v1 1154068 4267 - 2246441 I e colAng1.NW_012115755v1 1728487 8080 - 2415367 I e manLeu1.NW_012103943v1 237223 16701 + 2521317 I a score=2147219.000000 s hg38.chr5_KI270795v1_alt 45891 714 + 131892 cagataacacactttttatgacttgaatccttctgaatttattgagatttgttttatgacccagaatgtggtctatcttgttaaatgttctatgtacacttgagaagaatgtgtattctgttgttgttggatggaatgttctgtaaatgtcaatcaggtcaagttgattgatagtgttattcatcttctatattcttgttgactttctatatagttgttctattcattattgatgatattaaaatttctgactatgatcgtggattttt--aaatttctccctgcagtgctatcattttttacttcatatattttgaaacttctgttattaggtacataggtgtatagaattgttatgttcttttgattaattgtccccctttattacaaaataaact--tttttatcttataatagtttttgctctgaagtataccttgtctaatattaatatggccactccagctatctttgaactgtgttaacatgctatataattttccatctttttactcttaaccta-------------------------------------------------ttggtgtcttcatatttaaagtgtgtttcttgtagacagcatagagtctggtcctgccttttaaaaaaatgcaatctggtaattcctgtattttaattgggaatgttt-ggatcacttatatttaatgtgtttattaatatagttactttgaagtctgtcatc---ttatttgtgttctatttcccgtcgttctttgtt s panTro5.chr5 5294433 713 - 181907262 cagataacacactttttatgacttgaatccttctgaatttattgagatttgttttatgacccagaatgtggtctatcttgataaatgttctatgtacacttgagaagaatgtgtattctgttgttgttggatggaatgttctgtaaatgtcaatcaggtcaagttgattgatagtgttattcatcttctgtattcttgttgactttctatatagttgttctattcattattgatgatattaaaatttctgactatgatcatggattttt--aaatttctccctgcagtgctatcattttttacttcatgtattttgaaac-tctgttattaggtacataggtgtatagaattgttatgttcttttgattaattgtccccctttattacaaaataaacttctttttatcttataatagtttttgctctgaagtataccttgtctgatattaatatggccactccagctatctttgaactgtgttaacatgctatataattttccatctttttactc--aaccta-------------------------------------------------ttggtgtcttcatatttaaagtgtgtttcttgtagacagcatagagtctggtcctgccttttaaaaaaatgcaacctggtaattcctgtattttaattgggaatgttt-cgatcacttatatttaatgtgtttattaatatagttactttgaagcctatcatc---ttatttgtgttctatttcccgtcattctttgtt i panTro5.chr5 C 0 C 0 s panPan2.chr5 5556730 713 - 183735486 cagataacacactttttatgacttgaatccttctgaatttattgagatttgttttatgacccagaatgtggtctatcttgataaatgttctatgtacacttgagaagaatgtgtattctgttgttgttggatggaatgttctgtaaatgtcaatcaggtcaagttgattgatagtgttattcatcttctatattcttgttgactttctatatagttgttctattcattattgatgatattaaaatttctgactatgatcatggattttt--aaatttctccctgcagtgctatcattttttacttcatgtattttgaaac-tctgttattaggtacataggtgtatagaattgttatgttcttttgattaattgtccccctttattacaaaataaacttctttttatcttataatagtttttgctctgaagtataccttgtctgatattaatatggccactccagctatctttgaactgtgttaacatgctatataattttccatctttttactc--aaccta-------------------------------------------------ttggtgtcttcatatttaaagtgtgtttcttgtagacagcatagagtctggtcctgccttttaaaaaaatgcaacctggtaattcctgtattttaattgggaatgttt-agatcacttatatttaatgtgtttattaatatagttactttgaagcctatcatc---ttatttgtgttctatttcccgtcattctttgtt i panPan2.chr5 C 0 I 314 s gorGor5.CYUI01015413v1 1688563 712 + 3967317 caggtaacacactttttatgacttgaatccttctgaatttattgagatttgttttatgacccagaatgtggtctgtcttgataaatgttctatgtccacttgagaagaatgtgtattctgttgttgttgggtggaatgtcctgtaaatatcagtcaggtcaagtagattgatagtgttattcatcttctatattcttgttgactttctatatagttgttctcttcattattgatgatattaaaatttctgactatgatcgtggattttt--aaatgtctccctgcagtgctatcattttttacttcatgtattttgaaac-tctgttattagctacataggtgtatagaattgttatattcttttgattaattgtccccctttattacaaaataaac---tttttatcttataatagtttttgccctgaagtacaccttgtctaatattaatatggccactccagctatctttgaactgtgttaacatgctatataattttccatctttttactcttaaccta-------------------------------------------------ttggtgtcttcatatttaaagtgtgtttcttgtagacagcatagagtctggtcctgccttttaaaaaaatgcaatctggtaattcttgtattttaattgggaatgttt-agatcacttatatttaatgtgtttattaatatagttactttgaagtctgtcatc---ctatttgtgttctatttcccgttgttctttgtt i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4565195 716 + 163208435 cagataacacactttttatgacttgaatccttctgaatttattgagatttgttttatgacccagaatgtggtctatcttggtaaatgttctatgtacacttgagaagaatgtgtattctgttgttgttggatggaatgttctgtaaatgtcaatcaggtcaagttgattgatagtgctattcatcttctatattcttgttgactttctatatagttgttctgttcattattgacgatattaaaatttctgactatgatggtggattttt--aaatttctcccagcagtgctatcattttttacttcatgtattttgaaac-tc--ttattaggtacataggtgtttagaattgttacgttcttttgattaattgtccccctttattacaaaataaacttctttttatcttataacagtttttgctctgaaatataccttgtctaatattagtatagccattctagctatctttgaactgtgttaacatgctatataattttccatctttttactcttaaccca-------------------------------------------------ttggtgtcttcatatttaaagtgtgtttcttgtagacagcatagagtctggtcctgctttttaaaaaaatgcaatctggtaattcctgtattttaactgggagtgttt-agatcacttacatttaatgtgtttattaatatagttacttttaagtctatcatcttattatttgtattctatttcccatcattctttgtt i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5745660 718 - 180051392 cagataacatactttttatgacttgaatccttctgaatttattgagatttgttttatgacccggaatgtggtctattttggtaaatgttctatgtacacttgagaagaatgtgtattctgtggttgttggatggaatattctgtaaatgtcaatcaggtcaagttgattgatagtgttattcatcttctacattcttgttgactttctatatagttgttctattcattattgatgatattaaaatttctgactatgattgtggattttt--aaatttctccctgcagtgctatcattttttacttcatgtgttttgaaac-tctgttattaggtacataggtgtttagaattgttatgttcttttgattaattgtccccctttattataaaatgaacttctttttatcttatagtagtttttgctttgaagtataccttgtctaatattaatatagccactccagctatctttgaactgcgttaacatgctatgtaattttccatctttttactcttaaccta-------------------------------------------------tcgatgtcttcatatttaaagtgtgtttcttgtagacagcataaagtctggtcctgccttttaaaaaaatgcaatctggtaattcctgtattttaattgggagtattt-agatcatttacatttaatgtgtttattaatgtagttacttttaagtctatcatcttattatttgtgttctatttcccatcattctttgtt i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5932109 718 - 181584905 cagataacacactttttatgacttgaatccttctgaatttattgagatttgttttatgacccggaatgtggtctattttggtaaatgttctatgtacacttgagaagaatgtgtattctgtggttgttggatggaatattctgtaaatgtcaatcaggtcaagttgattgatagtgttattcatcttctacattcttgttgactttctatatagttgttctattcattattgatgatattaaaatttctgactatgattgtggattttt--aaatttctccctgcagtgctatcattttttacttcatgtgttttgaaac-tctgttattaggtacataggtgtttagaattgttatgttcttttgattaattgtccccctttattataaaatgaacttctttttatcttatagtagtttttgctttgaagtataccttgtctaatattaatatagccactccagctatctttgaactgcgttaacatgctatgtaattttccatctttttactcttaaccta-------------------------------------------------tcgatgtcttcatatttaaagtgtgtttcttgtagacagcataaagtctggtcctgccttttaaaaaaatgcaatctggtaattcctgtattttaattgggagtattt-agatcatttacatttaatgtgtttattaatgtagttacttttaagtctatcatcttattatttgtgttctatttcccatcattctttgtt i macFas5.chr6 C 0 C 0 s chlSab2.chr23 4746222 714 - 82825804 cagataacacgctttttatgacttgactccttctgaatttattgagatttgtttgatgacccggaatgtggtctattttggtaaatgttctatgtacacttgagaagagtgtgtattctgtggttgttggatggaatattctgtcaatgtcaatcaggtcaagttggttgacagtgttattcatcttctacattcttgttgactttctatgtagttgttctattcattattgatgatatcaaaattt----ctatgattgtggattttt--acatttctccctgcagtgctatcattttttacttcatgtgttttgaaac-tctgttattaggtacataggtgtttagaatggttatgttcttttgattaattgtccccctttgttataaaatgaacttctttttatcttatagtagtttctgctttgaagtataccttgtctaatattaatatagccactccagctatctttgaactgcgttaacatgctatgtaattttccatctttttactcttaaccta-------------------------------------------------tcgatgtcttcatatttaaagtgtgtttcttgtagacagcataaagtctggtcctgccttttaaaaaaatgcaatctggtaattcctgtattttaattgggagtattt-agatcatttacatttaatgtgtttattaatgtagttacttttaagtctatcatcttattatttgtgttctatttcccatcattctttgtt i chlSab2.chr23 C 0 C 0 s aotNan1.NW_018501968v1 1158335 763 - 2246441 cagataacacagttcttatgacttgaatccttttgaatttatcgagacttgttttatgacccggaatgtggtctatcttgataaatgttctatgtacacttgagaagaacgtgtattctgctgttgttggatggaacgttctgtaaatgtccatcgggtcaaattgattgagagtgttgttcatcttctatatccttgttgactttctatacagttgttctattcattgtttaagatattaaaatttctgactataatcgtggatttttaaaaatttctctctatagtgctatcagtttttacttcatgtattttgaaac---tgttattagatatatagatgtttagaattgttatgttctt----ttaattgtccccctttattacaaaatgaacttctttgtatcttataatagtctttgctctgaaatataccttgtctaatattaatatagccactccaactatctttgaactgtgttaacatgctacatattcttccatctttttactcttaagctattggtgtcttcatatttttttttttttattgtatcatattattttatatttggtgtcttcatatttaaagtgtgtttcttgtagacagcatatagtctggtcctgcctttt-aaaaaatgcaatctgataattcctgtattttcattgggagtgtttaagattacttacatttgatgtgtttattaatatagttacttttaagtctatcatcttattatttgtgttctatttcccatcgttctttgtt i aotNan1.NW_018501968v1 I 4267 C 0 e cebCap1.NW_016107999v1 53187 6641 - 709587 I e saiBol1.JH378186 2200105 6174 + 10068113 I e mm10.chr13 65979384 6914 - 120421639 I e calJac3.chr2 64069878 9594 + 204313951 I e otoGar3.GL873522 1227194 7559 + 48283576 I e cerAty1.NW_012007035v1 1778975 7234 - 21434487 I e macNem1.NW_012018466v1 955967 7426 - 16193990 I e canFam3.chr4 37170079 847 + 88276631 I e proCoq1.NW_012152163v1 758448 6575 - 940639 I e dasNov3.JH562710 245691 6502 - 960158 I e colAng1.NW_012115755v1 1728487 8080 - 2415367 I e manLeu1.NW_012103943v1 237223 16701 + 2521317 I a score=615266.000000 s hg38.chr5_KI270795v1_alt 46605 212 + 131892 tcctttttccttttgttctgacttttt-tggattaattttcattttattttttaaaattgacaaataataattgtatatattcatggaaagcatagtgatgtttcaatacatataatgtatagtgatcagatcagggtaattagcatattcatcatctcaaacattttattgtttctttgttttgggaacattcagtatcctcctggattaat s panTro5.chr5 5295146 212 - 181907262 tcctttttccttttgttctgacttttt-tggattcattttcattttattttttaaaattgacaaataataattgtatatattcatggaaagcataatgatgtttcaatacatataatgtatagtgatcagatcagggtaattagcatattcatcatctcaaacattttattgtttctttgttttgggaacattcagtatcctcctggattgat i panTro5.chr5 C 0 C 0 s panPan2.chr5 5557757 212 - 183735486 tcctttttccttttgttctgacttttt-tggattcattttcattttattttttaaaattgacaaataataattgtatatattcatggaaagcataatgatgtttcaatacatataatgtatagtgatcagatcagggtaattagcatattcatcatctcaaacattttattgtttctttgttttgggaacattcagtatcctcctggattaat i panPan2.chr5 I 314 C 0 s gorGor5.CYUI01015413v1 1689275 212 + 3967317 tcctttttccttttgttctgacttttt-tggattaattttcattttattttttaaaattgacaaataataattgtatatattcatggaaagcatagtgatgtttcaatacatataatgtatagtgatcagatcagggtaattagcatattcatcatctcaaacattttattgtttctttgttttgggaacattcagtatcctcctggattaat i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4565911 203 + 163208435 tcctttttccttttgttct---ttttt-tggattaattttcattttattttttaaaattgaca---aataattgtatatattcacggaaaac--agtgatgtttcaatacatataatgtatagtgatcagatcaaggtaattagcatattcatcatctcaaacattttattgtttctttgttttgggaacattcagtatcctcctggattag- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5746378 206 - 180051392 tcctttttccttttattctgacttttt-ttgg---attttcattttattttttaaaattgacaaataataattgtatatattcatggaaaacatagtgatgtttcagtacatata---tatagtgatcagatcagggtaattagcatattcatcatctcaaacattttattgtttctttgttttgggaacattcagtatcctcctggattaat i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5932827 206 - 181584905 tcctttttccttttgttctgacttttt-ttgg---attttcattttattttttaaaattgacaaataataattgtatatattcatggaaaacatagtgatgtttcagtacatata---tatagtgatcagatcagggtaattagcatattcatcatctcaaacattttattgtttctttgttttgggaacattcagtatcctcctggattaat i macFas5.chr6 C 0 C 0 s chlSab2.chr23 4746936 206 - 82825804 tcctttttccttttgttctgacttttt-ttgg---atttttattttattttttaaaattgacaaataataattgtatatattcatggaaaacatagtgatgtttcagtacatata---tatagtgatcagatcagggtaattagcatattcatcatctcaaacattttattgtttctttgttttgggaacattcagtatcctcctggattaat i chlSab2.chr23 C 0 C 0 s aotNan1.NW_018501968v1 1159098 210 - 2246441 tcctttttccttttgttctaacttcttgtggattaattttcattttatttttaaaaattgacaaataat-attgtatatattcatggaaaatatagcgatgtgtcaatacatataatgtatggtgatcagatca--gtaactagcatagtcatcatctcaaacattttattgtttctttgctttgggaacattcagtatccttctggattaat i aotNan1.NW_018501968v1 C 0 C 0 e cebCap1.NW_016107999v1 53187 6641 - 709587 I e saiBol1.JH378186 2200105 6174 + 10068113 I e mm10.chr13 65979384 6914 - 120421639 I e calJac3.chr2 64069878 9594 + 204313951 I e otoGar3.GL873522 1227194 7559 + 48283576 I e cerAty1.NW_012007035v1 1778975 7234 - 21434487 I e macNem1.NW_012018466v1 955967 7426 - 16193990 I e canFam3.chr4 37170079 847 + 88276631 I e proCoq1.NW_012152163v1 758448 6575 - 940639 I e dasNov3.JH562710 245691 6502 - 960158 I e colAng1.NW_012115755v1 1728487 8080 - 2415367 I e manLeu1.NW_012103943v1 237223 16701 + 2521317 I a score=4112884.000000 s hg38.chr5_KI270795v1_alt 46817 1124 + 131892 -ttttttaataattctattttatttattattattgtttttgagacagagccttgctctgttgcccaggctggagtgcagtggtgcaatctcagcttactacaacctctacctcccgggttcaagtgattctcgtgcctcagcctcccgagtagctgagattacgggtatgcaccaccacgcccagctaatttttttgta-ttttagtagagatggggtttcgctatatttggccaggctggtcttcaactcctggcctcaagtaatctgcctgtcttggcctcccaatgtgctgggattacaggtgtgaaccaccacgcctggcctgtgattccattttatatggtgcactattagtaaa-ttattagctataactgtttgttctgttattttagtagttattttagggtttataaggtatatgtttatttattgcaatctatcttcaagcaagtactattataccacttcatgtacagtat---aagcttagaataatgtacttctattgcctccttcctattctttatac--ttattgtcatgtatcttacttttgcttatgttttaaaatccagactacattgttagtgtttttgtatggtcaattttatgtaaggagtttcaaaaaa--ttaaaaaaaattatatatttacgtacatagttaccatttttggtattcgtcattcctttgtctggaaccagatttccagctggtattatttttttctgcccgaagccctcactttaacatttcttatagtgtggatctgctggtgattaatttcctcagcttttgtgagtctttacttcactttcatttttcaatattttaactaagtatagtgaaaatattttattgtcaattacgttgagaatgtttttctttcagtagcctaatgatgtttatctgctgtcttcttgattgccatatttctgacaagaaatctgtgccatccttattttga--tctctctacatgacatgtccttttcttttttctttggctgcctttaagatgttcttttgctaagtggtctttacaaatttgactataac-------------------------atgtaattttcttcag-----ttttttttttcttttttttttttggtgtgggtgtgtgcttggattct--ttgagctttttagat s panTro5.chr5 5295358 1126 - 181907262 -ttttttaatgattctattttatttattattattgtttttgagacagagccttgctctgttgcccaggctggagtgcagtggtgcaatctcagcttactacaacctcttcctcctgggttcaagtgattctcgtgcctgagcctcccaagtagctgagattacgggtatgcaccaccacgcccagctaatttttttgtatttttagtagagatggggtttcgctatatttggccaggctggtctccaactcctggcctcaagtaatctgcctgtcttggcctcccaatgtgctgggattacaggtgtgaaccaccacgcctggcctgtgattccattttatatggtgcactattagtaaa-ttattagctataactgtttgttttgttattttagtagttgttttagggtttataaggtatatgtttatttattgcaatctatcttcaagcaagtactattataccacttcatgtacagtat---aagcttagaataatgtacttctattgcctccttcctattctttatac--ttattgtcatgtatcttacttttgcttatgttttaaaatccagactacgttgttagtgtttttgtatggtcaattttatgtaaggagtttcaaaaaa--tttaaaaaaattatatatttacttacatagttaccatttttggtattcgtcattcctttgtctggaaccagatttccatctggtattatttttttctgcccgaagccctcactttaacatttcttatagtgtggatctgctggtgattaatttcctcagcttttgtgagtctttacttcactttcatttttcaatattttaactaagtatagtgaaaatattttattgtcaattacgttgagaatgtttttctttcagtagcttaatgatgtttatctgctgtcttcttgattgccatatttctgacaagaaatctgtgccatccttattttgatttctctctacatgacatgcctttttcttttttctttggctgcctttaagatgttcttttgctaactggtctttacaaatttgattataac-------------------------atgtaattttcctcag-----ttttttttttc-ttttttcttttggtgtgggtgtgtgcttggattct--ttgagctttttagat i panTro5.chr5 C 0 C 0 s panPan2.chr5 5557969 1125 - 183735486 -ttttttaatgattctattttatttattattattgtttttgagacagagccttgctctgttgcccaggctggagtgcagtggtgcaatctcagcttactacaacctcttcctcctgggttcaagtgattctcgtgcctgagcctcccgagtagctgagattacgggtatgcaccaccacgcccagctaatttttttgtatttttagtagagatggggtttcgctatatttggccaggctggtctccaactcctggcctcaagtaatctgcctgtcttggcctcccaatgtgctgggattacaggtgtgaaccaccacgcctggcctgtgattccattttatatggtgcactattagtaaa-ttattagctataactgtttgttttgttattttagtagttgttttagggtttataaggtatatgtttatttattgcaatctatcttcaagcaagtactattataccacttcatgtacagtat---aagcttagaataatgtacttctattgcctccttcctattctttatac--ttattgtcatgtatcttacttttgcttatgttttaaaatccagactacattgttagtgtttttgtatggtcaattttatgtaaggagtttcaaaaaa--tttaaaaaaattatatatttacttacatagttaccatttttggtattcgtcattcctttgtctggaaccagatttccatctggtattatttttttctgcccgaagccctcactttaacatttcttatagtgtggatctgctggtgattaatttcctcagcttttgtgagtctttacttcactttcatttttcaatattttaactaagtatagtgaaaatattttattgtcaattacgttgagaatgtttttctttcagtagcttaatgatgtttatctgctgtcttcttgattgccatatttctgacaagaaatctgtgccatccttattttgatttctctctacatgacatgcctttttcttttttctttggctgcctttaagatgttcttttgctaactggtctttacaaatttgattataac-------------------------atgtaattttcctcag-----tttttttttc--ttttttcttttggtgtgggtgtgtgcttggattct--ttgagctttttagat i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1689487 1125 + 3967317 -ttttttaatgattctattttatttattattattgtttttgagacagagccttgctctgttgcccaggctggagtgcagtggtgcaatctcagcttactacaacctcttcctcctgggttcaagtgattctcgtgcctgagcctcccgagtagctgagattacgggtatgcaccaccacgcccagctaatttttttgtatttttagtagagatggggtttcgctatatttggccaggctggtctccaactcctggcctcaagtaatctgcctgtcttggcctcccaatgtgctgggattacaggtgtgaaccaccacgcctggcctgtgattccattttatatgatgcactattagtaaa-ttattagctataactgtttgtttcgttattttagtagttgttttagggtttataaggtatatgtttatttattgcaatctatcttcaagcaagtactattataccacttcatgtacagtat---aagcttagaataatggacttctattgcctccttcctattctttatac--ttattgtcatgtatcttacttttgcttatgttttaaaatccagactacattgttagtgtttttgtatggtcaattttatgtaaggagtttcaaaaaa--tttaaaaaaattatatatttacttacatagttaccatttttggtattcgtcattcctttgtctggaaccagatttccatctggtatta-ttttttctgcccgaagccctcactttaacatttcttatagtgtggatctgctggtgattaatttcctcagcttttgtgagtctttacttcactttcatttttcaatattttaactaagtatagtgaaaatattttattgtcaattacgttgagaatgtttttctttcagtagcctaatgatgtttatctgctgtcttcttgattgccatatttctgacaagaaatctgtgccatccttgttttgatttctctctacatgacatgcctttttcttttttctttggctgcctttaagatgttcttttgctaactggtctttacaaatttggttataac-------------------------atgtaattttcttcag-----ttttttttttc-tttttttttttggtgtgggtgtgtgcttggattct--ttgagcttcttagat i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4566114 1141 + 163208435 -ttttttaatgattccattttatttattactattgtttttgagacagagccttgctttgttgcccaggctagagtgcagtggtgcaatctcagcttactacaacctctgcctcctggattcaagtgattctcgtgcctcagcctcctgagtagctgagatcacaggtatgcaccaccatgcccagctaatttttttgtatttttagtagtgatggggtttcgctata-ttggccaggctggtctccaactcctggcctcaagtaatctgcctgccttggcctcgcaacgtgctgggattacaggtgtgaaccaccatgcctggcctgtgattccattttatatggtacactattagtgaa-ttactagctataactctttgttttgttattttagtagttgttttagagtttataaggtatatgtttatttatcgcaatctatcttcaagcaagtactattataccacttcatgtatagtat---aagcttacaataatctatttctattgcctccttcctgttctttatac--ttattgtcatgtatcttacttttgtttatgttttaaaatccaaaatacattgttagtatttttgtatggtcaattttatgtaaggagtttcaaaaaa--ttaaaaaaaattatatatttacttacatagttaccatttttggtattcatcattcctttgtctagaaccagatttccatctggtattatttttttctgcccgaaggactcactttaacatttcttatagtgtggatctgctggtgattaatttcctcagcttttgtaaat-----cttcactttcatttttcaatattttaactaagtatagtgaaaatattttattgtcaattacattgagaatgtttttctttcagtagtgtaatggtgtttatctgctgtcttcttgattgccttatttctgacaagaaatctgtgccatccttattttgatttctgtctacatgacatgcctttttcttttttctttggctgcctttaagatgttcttttgctaactggtctttacaaatttgattataactggtctttacaaatttgattataatatgtaattttctt--------tttttttttt--tttttttttttggtgtgtgtgtgtgcttggattct--ttgagcttcttagat i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5746584 1116 - 180051392 --tttttaatgatcctattttatttattattattgtttttgagacagagccttgctctgttgcccaggctggcatgcagtggtgcaatctcagctcactacaacctccggctcctgggttcaagtgattctcatgcctcagcctcctgagtagctgagattacaggtatgcaccaccatgcccagctaatttttttgtatttttagtagagatgggatttcactata-ttggccaggctggtctccaactcctggcctcaagtaatctgcctgccttcgcctcccaacgtgctgggattacaggtgtgaaccaccacgcctggcctgtgattctattttatatggtgcactcttagtaaa-ttattagctataactctttgttttgttattttgatagttgttttagggtttataagatacatgtttatttgtcgcagtctatcttcaagcaagtactattataccacttcatgtacagtat---aagcttacaataatgtacttctattgactccttcctattctttatac--ttattgtcatgtatcttatttttgtttatgttttaaaatccagaatatattgttagtgtttttgtatggtcaattttatataaggagtttcaacaataaaaaaaaaaacttaggtatttacttacatagttactatttttggtattcatcattcctttatctagatccagatttccatctggtattatttttttctgcctgaaggactcactttaacatttcttatagtgtggatctgctggtgattaatttcttcagcttttgtaagtctttacttcactttcatttttcaatattttaactaagtatagtgaaaatattttattgtcaattacactgagaatgtttttctttcagtagtgtaatcatgtttatctgctgtcttcttgatggccttatttctgacaagaaatctgtgccatc---attttgatttctgtctacatgacatgcc-ttttcttttttctttggctgcctctaagatgttcttttactaactggtctttacaaatttgattataat-------------------------atgtaattttcttcag----------ttttt--tttttttttttggcatggatgtgtgcttggattct--ttgagcttcttagat i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5933033 1122 - 181584905 --tttttaatgatcctattttatttattattattgtttttgagacagagccttgctctgttgcccaggctggcatgcagtggtgcaatctcagctcactacaacctccggctcctgggttcaagtgattctcatgcctcagcctcctgagtagctgagattacaggtatgcaccaccatgcccagctaatttttttgtatttttagtagagatgggatttcactata-ttggccaggctggtctccaactcctggcctcaagtaatctgcctgccttcgcctcccaacgtgctgggattacaggtgtgaaccaccacgcctggcctgtgattctattttatatggtgcactcttagtaaa-ttattagctataactctttgttttgttattttgatagttgttttagggtttataagatacatatttatttgtcgcagtctatcttcaagcaagtactattataccacttcatgtacagtat---aagcttacaataatgtacttctattgactccttcctattctttatac--ttattgtcatgtatcttatttttgtttatgttttaaaatccagaatatattgttagtgtttttgtatggtcaattttatataaggagtttcaacaataaaaaaaaaaacttaggtatttacttacatagttactatttttggtattcatcattcctttatctagatccagatttccatctggtattatttttttctgcctgaaggactcactttaacatttcttatagtgtggatctgctggtgattaatttcttcagcttttgtaagtctttacttcactttcatttttcaatattttaactaagtatagtgaaaatattttattgtcaattacactgagaatgtttttctttcagtagtgtaatcatgtttatctgctgtcttcttgatggccttatttctgacaagaaatctgtgccatccttattttgatttctgtctacatgacatgcc-ttttcttttttctttggctgcctctaagatgttcttttactaactggtctttacaaatttgattataat-------------------------atgtaattttcttcag-------tttttttt--tttttttttttggcatggatgtgtgcttggattct--ttgagcttcttagat i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 963393 1120 - 16193990 -ttttttaatgatcctattttatttattattattgtttttgagacagagccttgctctgttgcccaggctggcatgcagtggtgcaatctcagctcactacaacctccggctcctgggttcaagtgattctcatgcctcagcctcctgagtagctgagattacaggtatgcaccaccatgcccagctaatttttttgtatttttagtagagatgggatttcactata-ttggccaggctggtctccaactcctggcctcaagtaatctgcctgccttcgcctcccaacgtgctgggattacaggtgtgaaccaccacgcctggcctgtgattctattttatatggtgcactcttagtaaa-ttattagctataactctttgttttgttattttgatagttgttttagggtttataagatacatgtttatttgtcgcagtctatcttcaagcaagtactattataccacttcatgtacagtat---aagcttacaataatgtacttctattgactccttcctattctttatac--ttattgtcatgtatcttatttttgtttatgttttaaaatccagaatatattgttagtgtttttgtatggtcaattttatataaggagtttcaacaat--aaaaaaaaacttaggtatttacttacatagttactatttttggtattcatcattcctttatctagatccagatttccatctggtattatttttttctgcctgaaggactcactttaacatttcttatagtgtggatctgctggtgattaatttcttcagcttttgtaagtctttacttcactttcatttttcaatattttaactaagtatagtgaaaatattttattgtcaattacactgagaatgtttttctttcagtagtgtaatcatgtttatctgctgtcttcttgatggccttatttctgacaagaaatctgtgccatccttattttgatttctgtctacatgacatgcc-ttttcttttttctttggctgcctctaagatgttcttttactaactggtctttacaaatttgattataat-------------------------atgtaattttcttcag--------ttttttt--tttttttttttggcatggatgtgtgcttggattct--ttgagcttcttagat i macNem1.NW_012018466v1 I 7426 C 0 s chlSab2.chr23 4747142 1128 - 82825804 --tttttaatgatcccattttatttattattattgtttttgagacagagccttgctctgttgcccaggctggcatgcagtggtgcaatctcagctcactacaacctccggctcccgggttcaagtgattctcatgcctcagcctcctgagtagctgagattacaggtatgcaccaccatgcccagctaatttttttgtatttttagtagaggtaggatttcactata-ttggccaggctggtctccaactcctggcctcaagtaatctgcctgccttggcctcccaatgtgctgggattacaggtgtgaaccaccacgcctggcctgtgattccattttatatggtgcactcttagtaaa-ttattagttataactctttgttttgttattttgatagttgttttagggtttataagatacatgtttatttatcgcagtctatcttcaagcaagtactattataccacttcatgtacagtat---aagcttacaataatgtacttctattgactccttcctattctttatac--ttactgtcatgtatcttatttttgtttatgttttaaaatccagaatatattgttagtgtttttgtatggtcaattttatataaggaatttcaaaaat-aaaaaaaaaacttaggtatttacttacatagttaccatttttggtattcatcattcctttatctagatccagatttccatctggtattatttttttctgcctgaaggactcactttaacatttcttatagtgtggatctgctggtgattaatttcttcagcttttgtaagtctttacttcactttcatttttcaatatttttactaagtatagtgaaaatattttattgtcaattacactgagaatgtttttctttcagtagtgtaatcatgtttatctgctgtcttcttgatggccttatttctgacaagaaatctgtgccatccttattttgatttctgtctacatgacatgcc-ttttcttttttctttggctgcctctaagatgttcttttactaactggtctttacaaatttgattataat-------------------------atgtaattttcttcagttttttttttttttt--tttttttttttggcatggatgtgtgcttgggttct--ttgagcttgttagat i chlSab2.chr23 C 0 C 0 s aotNan1.NW_018501968v1 1159308 1101 - 2246441 tttttttaatgattccattttattttcttttat--tttttgagacagagtcttgctctgttgcccaggctagagtgcagtggtgcattctcagctcactacaacctcaacctcctgggttcaagtgatccttgtgcctcagcctcctgagtagcagagattacaggtatgcaccaccatgcccagctaatttttttgtatttttagtagagatgggatttcgctata-ttggccagactggtctccaactcctggcctcaagtaattcacctgccttgacttcccaaagtgctgagattacaggcgtggaccaccgcacctggcctgtgattccattatacatggtgcactattagtaaatttattagctatagttctttgttttgttattttagtagtagttttagggtttacaaggtatatgtttactttttgcaatcta----caagcaagtactgttataatacttcatgtgcagtataagaagcttacaacaatgtgcttttattaccttcttcctattctttatactattattgtcatgtatcttacttttgcttatgttttaaaatccacaatacattgtcagtatttttctatagtgaattttacataaggattttcaataaataagaaaaaatcttatatatttactgacatagttgccatttttggtattcttcattcctttgtct------agattatcat-tggtattatttttttctgccagaaggactcattttaatatttctgatagtgtgggtctgctggtgattaatttcttcagcttttgtaagt-----cttcactttca-ttttcaatattttagctaagtatagtgaaactattttattgtcaattatattgagaacg-ttttctttcaatagtgtaa---tgttactctgctgtcttcttgactgccttatttctgacaagaaatctgtgccatccttattttggtttctctctacatgacatggc-------tttttctctagctgcctttaagatgttctcttgccaactggtctttataaattggattataat-------------------------gtgtaattttcttcag---------tttttt--tttttttttttgatgtggttgtgtgcttggattctaaagaagcttcttggat i aotNan1.NW_018501968v1 C 0 I 4 e cebCap1.NW_016107999v1 53187 6641 - 709587 I e saiBol1.JH378186 2200105 6174 + 10068113 I e mm10.chr13 65979384 6914 - 120421639 I e calJac3.chr2 64069878 9594 + 204313951 I e otoGar3.GL873522 1227194 7559 + 48283576 I e cerAty1.NW_012007035v1 1778975 7234 - 21434487 I e canFam3.chr4 37170079 847 + 88276631 I e proCoq1.NW_012152163v1 758448 6575 - 940639 I e dasNov3.JH562710 245691 6502 - 960158 I e colAng1.NW_012115755v1 1728487 8080 - 2415367 I e manLeu1.NW_012103943v1 237223 16701 + 2521317 I a score=373432.000000 s hg38.chr5_KI270795v1_alt 47941 77 + 131892 ctatggcaagtttagaaaatttttggtcgttgtttcttcagatattttttctgtccccacctcactcctgttatttg s panTro5.chr5 5296484 77 - 181907262 ctatggcaagtttagaaaatttttggtcgttgtttcttcagatattttttctgtccccacctcactcctgttatttg i panTro5.chr5 C 0 C 0 s panPan2.chr5 5559094 77 - 183735486 ctatggcaagtttagaaaatttttggtcgttgtttcttcagatattttttctgtccccacctcactcctgttatttg i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1690612 77 + 3967317 ctatggcaagtttagaaaatttttggtcgttgtttcttcagatattttttctgtccccacctcactcctgttatttg i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4567255 77 + 163208435 ctatggcaagtttagaaaatttttggtcattgtttcttcagatattttttctgtccccacttcactcctattatttg i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5747700 77 - 180051392 ctatggcaagtttagaaaatttttagtcattgtttcttcagatattttttctgtccccacctcgttcctgttatttg i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5934155 77 - 181584905 ctatggcaagtttagaaaatttttagtcattgtttcttcagatattttttctgtccccacctcgttcctgttatttg i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 964513 77 - 16193990 ctatggcaagtttagaaaatttttagtcattgtttcttcagatattttttctgtccccacctcgttcctgttatttg i macNem1.NW_012018466v1 C 0 C 0 s chlSab2.chr23 4748270 77 - 82825804 ctatggcaagtttagaaaatttttagtcattgtttcttcagatattttttctgtccccacctcgttcctgttatttg i chlSab2.chr23 C 0 C 0 s cebCap1.NW_016107999v1 59828 77 - 709587 ctatggtaagtttagaaaacttttggtcattgtttcttcagatattttttctgtctccacctcgctcctgctatttg i cebCap1.NW_016107999v1 I 6641 C 0 s aotNan1.NW_018501968v1 1160413 77 - 2246441 ctatggtaagtttagaaaatttttggtcattgtttcttcacatattttttctgtccccacctcgctcctgttatttg i aotNan1.NW_018501968v1 I 4 C 0 e saiBol1.JH378186 2200105 6174 + 10068113 I e mm10.chr13 65979384 6914 - 120421639 I e calJac3.chr2 64069878 9594 + 204313951 I e otoGar3.GL873522 1227194 7559 + 48283576 I e cerAty1.NW_012007035v1 1778975 7234 - 21434487 I e canFam3.chr4 37170079 847 + 88276631 I e proCoq1.NW_012152163v1 758448 6575 - 940639 I e dasNov3.JH562710 245691 6502 - 960158 I e colAng1.NW_012115755v1 1728487 8080 - 2415367 I e manLeu1.NW_012103943v1 237223 16701 + 2521317 I a score=2169096.000000 s hg38.chr5_KI270795v1_alt 48018 460 + 131892 gtgactcaaattatatacataataggctgcttgaccttgtcccacaactcactgatacttttttaaaattaatagactttattttttagagcagttttagatgtacagaaaaatcatgcagataattcccatatgtccattctcccctctccttcctatagcttttttagtgttatacgttagttacaattgatgaaccaacactgatccattattgctaactcaagtccatagtttacattagggttcactctttgtgttgtacattctaggtatgttgacaaatg-atgatatcatatatccaccattacagtatcatacagaatcatttctctgccttgaaaacaatcccctatgctccacctaaatgtacctgcttcccctaaatgtacctgcttcccctaaatgtacctgcttcccctctccctggaaaccactatcttttattgtctgtctatat s panTro5.chr5 5296561 460 - 181907262 gtgactcaaattatatacataataggctgcttgaccttgtcccacaactcactgatacttttttaaaattaatagactttattttttagagcagttttagatgtacagaaaaatcatgcagataattcccatatgtccattctcccctctccttcctatagcttttttagtgttatacgttagttacaattgatgaaccaacactgatccattattgctaactcaagtccatagtttacattagggttcactctttgtgttgtacattctaggtatgttgacaaatg-atgatatcatgtatccaccattacagtatcatacagaatcatttctctgccttgaaaacaatcccctatgctccacctaaatgtacctgcttcccctaaatgtacctgcttcccctaaatgtacctgcttcccctctccctggaaaccactatcttttattgtctgtctagat i panTro5.chr5 C 0 C 0 s panPan2.chr5 5559171 460 - 183735486 gtgactcaaattatatacataacaggctgcttgaccttgtcccacaactcactgatacttttttaaaattaatagactttattttttagagcagttttagatgtacagaaaaatcatgcagataattcccatatgtccattctcccctctccttcctatagcttttttagtgttatacgttagttacaattgatgaaccaacactgatccattattgctaactcaagtccatagtttacattagggttcactctttgtgttgtacattctaggtatgttgacaaatg-atgatatcatatatccaccattacagtatcatacagaatcatttctctgccttgaaaacaatcccctatgctccacctaaatgtacctgcttcccctaaatgtacctgcttcccctaaatgtacctgcttcccctctccctggaaaccactatcttttattgtctgtctagat i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1690689 457 + 3967317 gtgactcaaattatatacataataggctgcttgaccttgtcccacaactcactgatacttttttaaaattaatagactttattttttagagcagttttagatgtacagaaaaatcatgcagataattcccatatgtccattctcccctctccttcctatagcttttttagtgttatacgttagttacaattgatgaaccaacactgatccattattgctaactcaagtccatagtttacattagggttcactctttgtgttgtacattctaggtatgttgacaa----atgatatcatatatctaccattacagtatcatacagaatcatttctctgccttgaaaacaatcccctatgctccacctaaatgtacctgcttcccctaaatgtacctgcttcccctaaatgtacctgcttcccctctccctggaaaccactatcttttattgtctgtctagat i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4567332 395 + 163208435 gtgactcaaattatatacataataggctgcttgatcttgtcccacaactcgctgatacttttttaaaattaatagactttattttttagagcagttttagatgtacaaaaaaatcttgcaaataattcccataagtccattcccccctctccttcctatagcttttttagtgtgatacattagttacaattgatgaaccaacactgatccattattgctaactcaagtccatagtttacattagagttcactctt---------------------------agatg-atgatatcatatatccaccattacagtatcatacagaatcatttctctgccttgaaaaaaatcccctatgctcca--------------------------------------cctaaatatacctgcttcccctctccctggaaactactatcttttattgtctctctagtt i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5747777 407 - 180051392 gtgattcaaattgtatacgtaataggctgtttg-ccttgtcccacaactcactgatgcttttttaaaattaatagactttattttttagagcagttttagatgtacagaaaaatcatgcaaataattcccatatatccattctcccctctccttcctatagtttttttagtgtgatacattagttacaattgatgaaccaacactgatgcattattgctaactcaagtccatagtttacattagggttcactctttgtgttgtgcattctaggtgttttgacaaatg-atgatatcatatatccaccattacagtatcatacagaactacttctctgccttgaaaaacatcccctatgctcca--------------------------------------cctgaatgtacctgcttcccctttccctggaaaccactatctttta-------------- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5934232 407 - 181584905 gtgattcaaattgtatacgtaataggctgtttg-ccttgtcccacaactcactgatgcttttttaaaattaatagactttattttttagagcagttttagatgtacagaaaaatcatgcaaataattcccatatgtccattctcccctctccttcctatagtttttttagtgtgatacattagttacaattgatgaaccaacactgatgcattattgctaactcaagtccatagtttacattagggttcactctttgtgttgtgcattctaggtgttttgacaaatg-atgatatcatatatccaccattacagtatcatacagaactacttctctgccttgaaaaacatcccctatgctcca--------------------------------------cctgaatgtacctgcttcccctttccctggaaaccactatctttta-------------- i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 964590 407 - 16193990 gtgattcaaattgtatacgtaataggctgtttg-ccttgtcccacaactcactgatgcttttttaaaattaatagactttattttttagagcagttttagatgtacagaaaaatcatgcaaataattcccatatgtccattctcccctctccttcctatagtttttttagtgtgatacattagttacaattgatgaaccaacactgatgcattattgctaactcaagtccatagtttacattagggttcactctttgtgttgtgcattctaggtgttttgacaaatg-atgatatcatatatccaccattacagtatcatacagaacgacttctctgccttgaaaaacatcccctgtgctcca--------------------------------------cctgaatgtacctgcttcccctttccctggaaaccactatctttta-------------- i macNem1.NW_012018466v1 C 0 C 0 s chlSab2.chr23 4748347 403 - 82825804 gtgactcaaattatatacgtaataggctgtttg-ccttgtcccacaactcactgatgcttttttaaaattaatagactttattttttagagcagttttagatgtacagaaaaatcatgcaaataattcccatatgtccattctcccctctccttcctatagtttttttagtgtgatacattagttacaattgatgaaccaacactgatgcattattgctaactcaagtccatagtttacattagggttcac----tgtgttgtgcattctaggtattttgacaaatg-atgatatcatatgtccaccattacagtatcatacagagctacttctctgccttgaaagacatcccctatgctcca--------------------------------------cctgaatgtacctgcttcccctttccctggaaaccactatcttttg-------------- i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 253924 407 + 2521317 GTgactcaaattatatacataataggctgtttg-ccttgtcccacaactcactgatgcttttttaaaattaatagactttattttttagagcagttttagatgtacagaaaaatcatgcaaataattccgatatgtccattctcccctctccttcctatagtttttttagtgtgatacattagttacaattgatgaaccaacactgatgcattattgctaactcaagtccatagtttacattagggttcactgtttgtgttgtacattctaggtattttgacaaatg-atgatatcatatatccaccattatagtatcatacagaactacttctctgccttgaaaaacatcccctatgctcca--------------------------------------cctgaatgtacctgctttccctttccctggaaaccactatctttta-------------- i manLeu1.NW_012103943v1 I 16701 C 0 s cebCap1.NW_016107999v1 59905 421 - 709587 gtgactcaaattatatacatcattggctgcttgaccttgtcccacaactcaatgatgccttttaaaaattaatagactttattttttagagcagttttagatatacagaaaaatcctgcaaataattcccatatgtccattctcccctctccttcctatag-ttttttagtgtgatgcattagttacaattgatgagccaatactgatgcattattgctaactcaggtccatagtctacattagggttcactctttgtgttgtacattccaggtattttgacaaatgcatgatgtcatgtatccaccactacagtagcatacagaacaatttctctgccttgaaaaaaat-ccctgtgctcca--------------------------------------cctgtatgtacctgcttccccgctttctggataccactgtcttttatggtcgctctagtt i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1160490 419 - 2246441 gtgactcaaattatatacatcattggctgcttcaccttgttccacaactcactgatgccttttaaaaatcaatagactttattttttagagcagttttagatgtacagaaaaatgatgcacataattcccatatgtccattctcccctctccttcctgtag-ttttttagtgtgacacattagttacaattgatgaaccaatactgatgcatgattgctaactcaggtctatagtttacattagggttcactc--tgtgttgtacattctaggtattttgacaaatgcatgatgtcatgtatccaccattacagtagcatacagaacaatttctctgccttgaaaaaaat-ccctgtgctcca--------------------------------------cctgtatgtacccgcttcctctctttctggataccactgtcttttattgtcgctctagtt i aotNan1.NW_018501968v1 C 0 C 0 e saiBol1.JH378186 2200105 6174 + 10068113 I e mm10.chr13 65979384 6914 - 120421639 I e calJac3.chr2 64069878 9594 + 204313951 I e otoGar3.GL873522 1227194 7559 + 48283576 I e cerAty1.NW_012007035v1 1778975 7234 - 21434487 I e canFam3.chr4 37170079 847 + 88276631 I e proCoq1.NW_012152163v1 758448 6575 - 940639 I e dasNov3.JH562710 245691 6502 - 960158 I e colAng1.NW_012115755v1 1728487 8080 - 2415367 I a score=5177856.000000 s hg38.chr5_KI270795v1_alt 48478 813 + 131892 ttgccttttccagaatgtcctatagttggaatcacacagtatgtagcctttttcaaactgatttctttcatttagcaatactcatttatacttccttcaggtcttattatggcttgatagctcatctctttttatccatcaataatattctattatatatatgtttgtttttaccattcacctattgaaggacatcctggttgcctccagtttggggcaattatgaataaagccataataaacattcatatacaggtttttatgt-agacatatgtgttcaacccaattacttaagtacctaggaacatggttgctggattgtatgg-taagagaatgtttaattttgtaagaaactaccaaattgtcttctagagtggctgcaacattttgtattcccaccagcaataaatgagagttcctgacagttcctgttgcctcggatccttgttagcctctggtattgt---cagatttttagtcattctgctaaatggtatacagcgctatcccattgttggtttgatttgcagtttcctaaagacatatgatgttgagcatcttttctatgtttatttgtaatttatgtatcttctttgatgagatgtctgcttagatcttttgcca-------------------------------------------------------------ttttaaatttggcttgtttgtttcttattgttgagttttaaaagatcttcacatattttggatgccagtcttttatgtgtttggcaaatattttctcctactgtgtgacttg-tctttgcattctcttatcaaggactttctgagatcagaagtttgtaatttttaatgaagtccaatttttcaagtatttct s panTro5.chr5 5297021 813 - 181907262 ttgccttttccagaatgtcatatagttggaatcacacagtatgtagcctttttcaaactgatttctttcatttagcaatactcatttatacttccttcaggtcgtcttatggcttgatagctcatctctttttatccatcaataatattctattgtatatatgtttgtttttaccattcacctattgaaggacatcctggttgcctccagtttggggcaattatgaataaagccataataaacattcatatacaggtttttatgt-agacatatgtgttcaacccaattacttaagtacctaggaacatggttgctggattgtatgg-taagagaatgtttaattttgtaagaaactaccaaattgtcttctagagtggctgcaacattttgtattctcaccagcaataaatgagagttcctgagagttcctgttgcctcggatccttgttagcctctggtattgt---cagatttttagtcattctgctaaatggtatatagtgctatcccattgttggtttgatttgcagtttcctaaagacatatgatgttgagcatcttttctatgtttatttgtaatttatgtatcttctttgatgagatgtctgcttagatcttttgcca-------------------------------------------------------------ttttaaatttggcttgtttgtttcttattgttgagttttaaaagatcttcacatattttggatgccagtcttctatgtgtttggcaaatattttcttctactgtgtgacttg-tctttgcattctcttatcaaggactttctcagatcagaagtttgtaatttttaatgaagtccaatttttcaagtatttct i panTro5.chr5 C 0 C 0 s panPan2.chr5 5559631 813 - 183735486 ttgccttttccagaatgtcatatagttggaatcacacagtatgtagcctttttcaaactgatttctttcatttagcaatactcatttatacttccttcaggtcttactatggcttgatagctcatctctttttatccatcaataatattctattgtatatatgtttgtttttaccattcacctattgaaggacatcctggttgcctccagtttggggcaattatgaataaagccataataaacattcatatacaggtttttatgt-agacatatgtgttcaacccaattacttaagtacctaggaacatggttgctggattgtatgg-taagagaatgtttaattttgtaagaaactaccaaattgtcttctagagtggctgcaacgttttgtattctcaccagcaataaatgagagttcctgagagttcctgttgcctcggatccttgttagcctctggtattgt---cagatttttagtcattctgctaaatggtatatagtgctatcccattgttggtttgatttgcagtttcctaaagacatatgatgttgagcatcttttctatgtttatttgtaatttatgtatcttctttgatgagatgtctgcttagatcttttgcca-------------------------------------------------------------ttttaaatttggcttgtttgtttcttattgttgagttttaaaagatcttcacatattttggatgccagtcttttatgtgtttggcaaatattttctcctactgtgtgacttg-tctttgcattctcttatcaaggactttctcagatcagaagtttgtaatttttaatgaagtccaatttttcaagtatttct i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1691146 814 + 3967317 ttgccttttccagaatgtcatatagttggaatcacacagtatgtagcctttttcaaactgatttctttcatttagcaatactcatttaaacttccttcaggtcttattatggcttgatagctcatctctttttatccatcaataatattctattgtatatatgtttgtttttaccattcacctattgaaggacatcctggttgcttccagtttggggcaattatgaataaagccataataaacattcatatacaggtttttatgt-agacatatgtgttcaacccaattacttaagtacctaggaacatggttgctggattgtatgg-taagagaatgtttaattttgtaagaaactaccaaattgtcttctagagtggctgcaacattttgtattcccaccagcaataaatgagagttcgtgagagttcctgttgcctcggatccttgttagcctctggtattgt---cagatttttagtcattctgctaaatggtatatagtgctatcccattgttggtttgatttgcagtttcctaaagacatatgatgttgagcatcttttctatgtttgtttgtaatttatgtatcttctttgatgagatgtctgcttagatcttttgcca-------------------------------------------------------------ttttaaatttggcttgtttgtttcttattgttgagttttaaaagatcttcacatattttggatgccagtcttttatgtgtttggcaaatattttctcctactgtgtgacttgttttttgcattctcttatcaaggactttctcagatcagaagtttgtaatttttaatgaagtccaatttttcaagtatttct i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4567727 800 + 163208435 ttgccttttccagaatgtcatatagttggaatcgcacagtatgtagcctttttcaaactga-ttctttcatttagcaatacccatttacacttccttcaggtcttattatggcttgatagctcatctcttcttatctatcaataatattctattgtatacatgtttgtttttaccattcacctattgaaggacatcctggttgcttccagtttggggcaattatgaatacagccataataaacattcatatgcaggattttatgt-agacatatgttttcaacccaattacttaaatacctaggaacatggttgctggattgtatgg-taagagaatgtttaattttgtaagaaactaccaaattgtcttctagagtggctgtaacattttgaattcccaccagcaatgaatgag----------agttcctattgcctcggatccttgttagcctctggtattgt---cagatttttagtcattctgctaaatggtatatagtgctgtcccattgttgttttgatttgcaatttcctaaagacatatgatgttgagcatcttttctatttttatttgtaatttatatatcttctttgatgagatgtctgcttagatcttttgcca-------------------------------------------------------------tttttaatttggcctgtttgtttcttattgttgagttttaaaagatcttcacatattttggatgccagtcttttatgtgtttggcaaatattttctcctactgtgtgacttg-tctgtgtgt--tcttatcaaggactttctcagatcagaagtttgtaatttttaatgaagtccaatttttcaagtatttct i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5748184 802 - 180051392 ttgccttttccagaatgtcatatagttggaatcacacagtatgtagcctttttcaaactgatttctttcatttagcaatacccatttacacttccttcaggtcttattatggcttgatagcttatctctttttatccatcaataatattctattgtatatatgtttgtttttaccattcacctgttgaaggacatcctggttgcttccagtttgggacaattatgaataaagccataataaacattcatatacaggtttttatgt-agacatatgttttaaacccaattacttaaatacctaggaacatggttgctggattgtatgg-taagagtatgtttaattttgtaagaaactaccaaattgtcttctagaatggctgcaacattttgtattcccaccggcagtaaatgag----------agttcctattgcttcggatccttgttagcctctggtattgtcagcagatttttagtcattctgctaaatggtatatagtgctatcccattgttggtttgatttgcaatttcctaaagacatacgatgttaagcatattttctatgtttatttctaatttatgtatcttctttgataaggtgtctgcttagatctcttgcca-------------------------------------------------------------ttttaaatttggc----ttgtttcttactattgagttttaaaagatcttcacatattttggataccagtcttttatgtgtttggcaaatattttctcctactgtgcaacttg-tctttgtattctcttatcgaggactttctcagatcagaagtttgtaatttttaatgaagtccaatttttcaggtatttct i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5934639 802 - 181584905 ttgccttttccagaatgtcatatagttggaatcacacagtatgtagcctttttcaaactgatttctttcatttagcaatacccatttacacttccttcaggtcttattatggcttgatagcttatctctttttatccatcaataatattctattgtatatatgtttgtttttaccattcacctgttgaaggacatcctggttgcttccagtttgggacaattatgaataaagccataataaacattcatatacaggtttttatgt-agacatatgttttaaacccaattacttaaatacctaggaacatggttgctggattgtatgg-taagagtatgtttaattttgtaagaaactaccaaattgtcttctagaatggctgcaacattttgtattcccaccggcagtaaatgag----------agttcctattgcttcggatccttgttagcctctggtattgtcagcagatttttagtcattctgctaaatggtatatagtgctatcccattgttggtttgatttgcaatttcctaaagacatacgatgttaagcatattttctatgtttatttctaatttatgtatcttctttgataaggtgtctgcttagatctcttgcca-------------------------------------------------------------ttttaaatttggc----ttgtttcttactattgagttttaaaagatcttcacatattttggataccagtcttttatgtgtttggcaaatattttctcctactgtgcaacttg-tctttgtattctcttatcgaggactttctcagatcagaagtttgtaatttttaatgaagtccaatttttcaggtatttct i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 964997 863 - 16193990 ttgccttttccagaatgtcatatagttggaatcacacagtatgtagcctttttcaaactgatttctttcatttagcaatacccatttacacttccttcaggtcttattatggcttgatagcttatctctttttatccatcaataatattctattgtatatatgtttgtttttaccattcacctgttgaaggacatcctggttgcttccagtttgggacaattatgaataaagccataataaacattcatatacaggtttttatgt-agacatatgttttcaacccaattacttaaatacctaggaacatggttgctggattgtatgg-taagagtatgtttaattttgtaagaaactaccaaattgtcttctagaatggctgcaacattttgtattcccaccggcagtaaatgag----------agttcctattgcttcggatccttgttagcctctggtattgtcagcagatttttagtcattctgctaaatggtatatagtgctatcccattgttggtttgatttgcaatttcctaaagacatacgatgttaagcatattttctatgtttatttctaatttatgtatcttctttgataaggtgtctgcttagatctcttgccattttaaattcggctggtttcttactattgagttttaaaagatcttcacatattttggcttgttttaaatttggc----ttgtttcttactattgagttttaaaagatcttcacatattttggataccagtcttttatgtgtttggcaaatattttctcctactgtgcaacttg-tctttgtattctcttatcgaggactttctcagatcagaagtttgtaatttttaatgaagtccaatttttcaggtatttct i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1786209 799 - 21434487 ttgccttttccagaatgtcatgtagttggaatcacacagtatgtagcctttttcaaactgatttctttcatttagcaatacccatttacacttccttcaggtcttattatggcttgatagcttatctctttttatctatcaataatattctattgtatatatgtttgtttttaccattcacctgttgaaggacatcctggttgcttccagtttgggacaattatgaataaagccataataaacattcatatgcaggtttttatgt-agatatatgttttcaacccaattacttaaatacctaggaacatggttgctggattgtatgg-taagagtatgtttaattttgtaagaaactaccaaattgtcttctagagaggctgcaacattttgtattcccaccagcaataaatgag----------agttccttttgcttcggatccttgttagcctctggtattgt---cagatttttagtcattctgctaaatggcatatagtgctatcccattgttggtttgatttgcaatttcctaaagacatatgatgttgagcatattttctatgtttatttctaatttatatatcttctttgatgaggtgtctgcttagatctcctgcca-------------------------------------------------------------ttttaaatttggc----ttgtttcttactgttaagttttaaaagatcttcacatattttggataccagtcttttatgtgtttggcaaatattttctcctactgtgcaacttg-tctttgtattctcttatcgaggactttctcagatcagaagtttgtaatttttaatgaggtccgatttttcaggtatttct i cerAty1.NW_012007035v1 I 7234 C 0 s chlSab2.chr23 4748750 779 - 82825804 ttgtcttttccagaatgtcatatagttggaatcacacagtatgtagcctttttcaaactgatttctttcatttagcaatacccatttacacttccttcaggtcttattatggcttgatagcttatttctttttatccatcaataatattctattgtatatatgtttgtttttaccattcacctgttgaaggacatcctggttgcttccagtt--------------------ccataataaacattcatatgcaggtttttatgt-agacatatgttttccacccaattacttaaatacctaggaacatggttgctggattgtatgg-taagagtatgtttaattttgtaagaaactaccaaattgtcttctagagtggctgcaacattttgtattcccaccagcaataaatgag----------agttcctattgcttcggatccttgttagcctctggtattgt---cagatttttagtcattctgctaaatggtatatagtgctatcccattgttgctttgatttgcaatttcctaaagacatatgatgttgagcatattttctatgtttatttctaatttatatatcttctttgatgaggtgtctgcttagatctcctgcca-------------------------------------------------------------ttttaaatttggc----ttgtttcttactgttgagttttaaaagatcttcacatattttggataccagtcttctatgtgtttggcaaatattttctcctactgtgcaacttg-tctttgtattctcttatcgaggactttctcagatcagaagtttgtaatttttaatgaagtccaatttttcaggtatttct i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 254331 799 + 2521317 ttgccttttccagaatgtcatgtagttggaatcacacagtatgtagcctttttcaaactgatttctttcatttagcaatacccatttacacttccttcaggtcttattatggcttgatagcttatctctttttatctatcaataatattctattgtatatatgtttgtttttaccattcacctgttgaaggacatcctggttgcttccagtttgggacaattatgaataaagccataataaacattcatatgcaggtttttatgt-agacatatgttttcaacccaattacttaaatacctaggaacatggttgctggattgtatgg-taagagtatgtttaattttgtaagaaactaccaaattgtcttctagagaggctgcaacattttgtattcccaccagcaataaatgag----------agttccttttgcttcggatccttgttagcctctggtattgt---cagatttttagtcattctgctaaatggcatatagtgctatcccattgttggtttgatttgcaatttcctaaaggcatatgatgttgagcatattttctatgtttatttctaatttatatatcttctttgatgaggtgtctgcttagatctcctgcca-------------------------------------------------------------ttttaaatttggc----ttgtttcttactgttgagttttaaaagatcttcacatattttggataccagtcttttatgtgtttggcaaatattttctcctactgtgcaacttg-tctttgtattctcttatcgaggactttctcagatcagaagtttgtaatttttaatgaagtccgatttttgaggtatttct i manLeu1.NW_012103943v1 C 0 C 0 s cebCap1.NW_016107999v1 60326 780 - 709587 ttgccctttccaaaatgtcatataggtggaatcacacagtatgtagcctttttcaaactgacttctttcatttagcaatacccatttacgcttccttcacatcttgtcatggctagatagctcatctctttttatccatcaataatattctattgtatatatgtttgtttttactattcacctactgagggacatcttggttgcttccagtttggggcaattatgaataaaggcataataaacattcatatgcagctttttgtgcggggcatatgttttcaacctaattacttaagtacctagaaacatggttgctggattgtgtgg-taagagtatgtttaattttgtaagaaactgccaaattgcctttcagagtggctgcaacattttgtgttcccaccagaaataaatgag----------agttcctatgggtttgcatccttgttagtctctggtattgt---cagatttttggt-----------------------gctatcccattgctggcttgatttgcaatttcctaaagacatatgatgtggagcatcttttatatgcttgtttgtaattcatagatcttctttgatgaggtgtctgattagatcttttgcca-------------------------------------------------------------ttttaaaattgacttttatgtttcttattgttgagttttaaaagatcttcacacattttggatgccagtctttcatgtgtttggcaaacattttctcctaatgtgtgacttg-tctttgcattctcttatcaggaactccctcagatcagaagtttgtaa-ttttaatgaagttcaatttttcaggtatttct i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1160909 780 - 2246441 ttgccctttccaaaatgtcatatagatggaatcgcacagtatgtagcctttttcaaactgacttctttcatttagcaatacctatttacgcgtccttcatgtcttgccatggctagatagctcatctctttttatccatcagtaatattctattgtatatatgtttatttttaccattcacctactgaaggacatcttggttgcttccagtttggggcaattatgaataaagccataataaacattcatatgcagctttttgtgt-gggcatatgttttcaacccaattacttaagtacctaggaacatggttgctgaattgtgtggttaagagtatgtttaattttgtaagaaactgccaaattgtctttcagagtggctgcaacattttgtattcccaccagcaataaatgag----------agttcctatgggtttgcatccttattagtctctggtattgt---cagatttttggt-----------------------gctatcccattgttggcttgatttgcaatttcctaaagacatatgatgtggagcaccttttatatgcttgtttgtaattcatatatcttcttggatgaggtgtctgtttagatcttttgcca-------------------------------------------------------------ttttaaaattgacttttttgcttcttattgttgagttttaaaagatcttcacacattttggatgccagtctttcatgtgtttggcaaacattttctcctaatgtgtgacttg-tctttgcattctcttatcaggaactccctcagatcagaagtttgtaa-ttttaatgaagttcaatttttcaggtatttct i aotNan1.NW_018501968v1 C 0 C 0 e saiBol1.JH378186 2200105 6174 + 10068113 I e mm10.chr13 65979384 6914 - 120421639 I e calJac3.chr2 64069878 9594 + 204313951 I e otoGar3.GL873522 1227194 7559 + 48283576 I e canFam3.chr4 37170079 847 + 88276631 I e proCoq1.NW_012152163v1 758448 6575 - 940639 I e dasNov3.JH562710 245691 6502 - 960158 I e colAng1.NW_012115755v1 1728487 8080 - 2415367 I a score=1224490.000000 s hg38.chr5_KI270795v1_alt 49291 156 + 131892 ttcatggatcagggttttggtgttgtataataaaagtcattgccaaacccagggttatttagattttctc-----------ctatgtcatcttctagtagtttacatttaggtctatgattcattttgagcaaatttttatgaaaggtgtaaggtctgtgtctagaa s panTro5.chr5 5297834 156 - 181907262 ttcatggatcagggttttggtgttgtataataaaagtcattgccaaacccagggttatttagattttctc-----------ctatgtcatcttctagtagtttacatttaggtctatgattcattttgagcaaatttttatgaaaggtgtaaggtctgtgtctggaa i panTro5.chr5 C 0 C 0 s panPan2.chr5 5560444 156 - 183735486 ttcatggatcagggttttggtgttgtataataaaagtcattgccaaacccaggattatttagattttctc-----------ctatgtcatcttctagtagtttacatttaggtctgtgattcattttgagcaaacttttatgaaaggtgtaaggtctgtgtctggaa i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1691960 156 + 3967317 ttcatggatcagggttttggtgttgtataataaaagtcattgccaaacccagggttatttagattttctc-----------ctatgtcatcttctagtagtttacatttaggtctatgattcattttgagcaaatttttatgaaaggtgtaaggtctgtgtctagaa i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4568527 167 + 163208435 ttcatggatcagggttttggtgttgtataataaaagtcatcgccaaacccagggttatttagattttctcctatgtaactactatgtcatcttctagtagtttacatttaggtctatgattcattttgagcacatttttatgaaaggtgtaagatctgtgtctagaa i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5748986 156 - 180051392 ttcatgggtcagggttttggtgttgtataataaaagtcattgccaagcccggggttatttagattttctc-----------ctatgtcatcttctagtagtttacatttaggtctatgattcattttgagcaaatttttatgaaaggtgtaaggtctgtgtctagaa i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5935441 156 - 181584905 ttcatgggtcagggttttggtgttgtataataaaagtcattgccaagcccggggttatttagattttctc-----------ctatgtcatcttctagtagtttacatttaggtctatgattcattttgagcaaatttttatgaaaggtgtaaggtctgtgtctagaA i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 965860 156 - 16193990 ttcatgggtcagggttttggtgttgtataataaaagccattgccaagcccggggttatttagattttctc-----------ctatgtcatcttctagtagtttacatttaggtctatgattcattttgagcaaatttttatgaaaggtgtaaggtctgtgtctagaa i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1787008 156 - 21434487 ttcatggatcagggttttggtattgtataataaaagtcattgccaagcccggggttatttaggttttctc-----------ctatgtcatcttctagtagtttacatttaggtctatgattcattttgagcaaatttttatgaaaggtgtaaggtctgtgtctagaa i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4749529 156 - 82825804 ttcatggatcagggttttggtgttgtataataaaagtcattgccaagcccagggttatttagattttctc-----------ctatgtcatcttctagtagtttacatttaggtctatgattcattttgagcaaatttttatgaaaggtgtaaggtctgtgtctagaA i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 255130 156 + 2521317 ttcatggatcagggttttggtgttgtataataaaagtcattgccaagcccggggttatttaggttttctc-----------ctatgtcatcttctagtagtttacatttaggtctatgattcattttgagcaaatttttatgaaaggtgtaaggtctgtgtctagaa i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1736567 156 - 2415367 ttcatggatcagggttttgatgttgtataatgaaagtcattgccaagcccagggttatttagattttctc-----------ctatgtcatcttctagtagttcacatttaggtctatgattcattttgagcaaatttttatgaaaggtgtaagatctgtgtctagaa i colAng1.NW_012115755v1 I 8080 C 0 s cebCap1.NW_016107999v1 61106 149 - 709587 ttcatggatcggggttttggtgttgtataataaaagtcatcgccaaagccagggttatttagattttttc-----------ctatgtcatcttctagtaatttacatttaggtctatgaatcattttgagctaatctttatggaagg-------tctgtgtctagat i cebCap1.NW_016107999v1 C 0 I 26 s aotNan1.NW_018501968v1 1161689 149 - 2246441 ttcatggatcggggttttggtgttgtataataaaagtcattgccaaacccagggttatttagattttctc-----------ctatgtcatcttctagtaatttacatttaggtctatgattcattttgagctaatttttatgaaagg-------tctgtgtctagat i aotNan1.NW_018501968v1 C 0 I 5 e saiBol1.JH378186 2200105 6174 + 10068113 I e mm10.chr13 65979384 6914 - 120421639 I e calJac3.chr2 64069878 9594 + 204313951 I e otoGar3.GL873522 1227194 7559 + 48283576 I e canFam3.chr4 37170079 847 + 88276631 I e proCoq1.NW_012152163v1 758448 6575 - 940639 I e dasNov3.JH562710 245691 6502 - 960158 I a score=695736.000000 s hg38.chr5_KI270795v1_alt 49447 125 + 131892 ccttccctccctccat-------------------ct------------------------ctccctccctccctcccttcctttcttccttccttact---ttctttcttccttccctgttgtttctgcatgtgatgttgcatgtccacttgtttcggcaccatttgttg s panTro5.chr5 5297990 125 - 181907262 ccttccctccctccat-------------------ct------------------------ctccctccctccctcccttcctttcttccttccttact---ttctttcttccttccctgttgtttctgcatgtgatgttgcatgtccacttgtttcggcaccatttgttg i panTro5.chr5 C 0 C 0 s panPan2.chr5 5560600 125 - 183735486 ccttccctccctccat-------------------ct------------------------ctccctccctccctcccttcctttcttccttccttact---ttctttcttccttccctgttgtttctgcatgtgatgttgcatgtccacttgtttcggcaccatttgctg i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1692116 133 + 3967317 ccttccctccctccgt-------------------ctctc----------------cctccctccctccctccctcccttccttccttccttccttcct---ttctttcttccttccctgttgtttctgcatgtgatgttgcatgtccacttgtttcggcaccatttgttg i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4568694 149 + 163208435 cctaccctccctccct-------------------ccctcccttccttctttccttccttccttcctccctccctccctccctccctcccttccttcct---cccttccttccttccctgttgtttctgcatgtgatgttgcatgtccacttgtttcggcaccatttgttg i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5749142 92 - 180051392 ccttctctccctccct-------------------ct------------------------cttcttccctccctccc------------------------------------tccctattgtttctgcatgtgatgttgcatgtccacttgtttcggccccatttgttg i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5935597 92 - 181584905 ccttctctccctccct-------------------ct------------------------cttcttccctccctccc------------------------------------tccctATTGtttctgcatgtgatgttgcatgtccacttgtttcggccccatttgttg i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 966016 92 - 16193990 ccttctctccctccct-------------------ct------------------------cttcttccctccctccc------------------------------------tccctattgtttctgcatgtgatgttgcatgtccacttgtttcggccccatttgttg i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1787164 92 - 21434487 ccttctctccctcact-------------------ct------------------------cttcttccctcccttcc------------------------------------tccctgttgtttctgcatgtgatattgcatgtccacttgtttcggccccatttgttg i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4749685 92 - 82825804 ccttctctccctccct-------------------ct------------------------cttcttccctccctccc------------------------------------tccctGTTGtttctgcatgtgatattgcatgtccacttgtttcggccccatttgttg i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 255286 92 + 2521317 ccttctctccctcact-------------------gt------------------------cttcttccctccctccc------------------------------------tccctgttgtttctgcatgtgatattgcatgtccacttgtttcggccccatttgttg i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1736723 92 - 2415367 ccttctctccctccct-------------------ct------------------------cttcttccttccctccc------------------------------------tccctgttgtttctgcatgtgatgttgcatgttcacttgttttggccccgtttcttg i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64079472 119 + 204313951 ccttccttccttcctt----------------------------------------------------ccttccttccttccttccttccttccttccttcctccttctttccctccCTGTTGtttctgcatgtaatgtagcatgtccacttgtttcagcaccatttgttg i calJac3.chr2 I 9594 C 0 s cebCap1.NW_016107999v1 61281 147 - 709587 cctcccttctttccttacttcctcccttcatccctcc------------------------ctccttcccttcctttcttcctttcttcctctcttccttcttccttccttccttccctgttgtttctgaatgcaatgttgcatgtccacttgtttcagcaccatttgctg i cebCap1.NW_016107999v1 I 26 C 0 s aotNan1.NW_018501968v1 1161843 128 - 2246441 ccctccctcgctccat-------------------cc------------------------ctccctccctctctcgctccctcccaccctcccttccttcttccttccttccctccctgttgtttctgcatgtaatgttgcatgtccacttgtttcagcaccatttgttg i aotNan1.NW_018501968v1 I 5 C 0 e saiBol1.JH378186 2200105 6174 + 10068113 I e mm10.chr13 65979384 6914 - 120421639 I e otoGar3.GL873522 1227194 7559 + 48283576 I e canFam3.chr4 37170079 847 + 88276631 I e proCoq1.NW_012152163v1 758448 6575 - 940639 I e dasNov3.JH562710 245691 6502 - 960158 I a score=16414801.000000 s hg38.chr5_KI270795v1_alt 49572 1690 + 131892 aaaacactaccccttgctccattgcctttgctacccttgaattgcctttgctcctatgtcaaagatcagttgactacttgtataggtctatt-tctggtctctgttctgttccattgatctgtt-catctattcttttactaatactacactgtcttgattactgtagcgttacag-taagtc--ttgaa-tcagatattatt----ggtcccctgactgtttttccttagtactgtgttggctattctgggtcattcatctttccatataaattttagaaccagtttgtcaaaatccacaaaataacttgctgaaattttgactgggatggcattgaatctatagatcaactgacatcttggcaatattgagtcttcctcttcataaacatgaagtatctatttatttagatttcttttgatttctttaatcagttttgtagttttcgtcatgtagatct----tatacatattttattagattcataaccaagt------a-ttttt-aatgctaatataaatggtattgtgtttgaaatttcaaatttcagtggttcattgctggtatataggaaaacaattgacttatgtataaaccttttatcctggcaagcttgctataattgatcattggttcagg------tttgttaa---ttctttaggatttttcta-tataaaaatcatgtcatctgtgaacaaggacagttttaatttatttctttccagtctgtgtatatttatctccttttcttgtcttaggtcatcagctagaacttccagtacaatgttgaataggaatgatgagagagtacatcctaatcttagggggaagacatccagtttctcatcatgaagtatgacagtagctgtagg-ttttttatagatgttctgtattaaactgaggaatttctcctctatttctagtttgctgaatttttatcgagatggaggttggattttgtcaaatgctttttatccatttattcatatgagcatatga---ttttttctttagcttcttgatgtgacagattatatttattga-ttttgaatg-ttTTTTAAAAC----TGTACAGATACTGTGATGATTTTAATTGCATATGAAATTAACTTCG-----TTATCTTCAGGC----TTATCACATCAAAGGTTTACTTGCAAAATT--------------------------------------------GGACCTTTGTTCTTATTCAGTAAATCCGTGTTACAAGATGAGCCAGGATTTAGATATGTAAATATATGTAACTTTTTAGTATCTTTCATTTCAAATTAGAACTACATATTTGGAATTTACTGCTGTAGTCTCGTGTTAATGGCTGACATGAGAAGACATT-AAAAAAAATCCTGAAGTTATCCATGCTTGCTGTTTATTTAGTCTTCTTGTTTGGAACAAAAAGTAAATAATTCACAAATACTACCACCTAAGCCCCTGTTTCAAATGAAACATCAGTCTTCAGCTTGCAAAATAATGTCTTTATAATTAAGGAAATAGCAGCAGAAAACCTATGCTAGTTGCTTTTTTCTTCCTGGAGAAGTTGACAGGATAACTGCAATCCTAGGGGCATCTCTGTGTTGAATCTGAGACGTGGAACAAAAAGAAAAGTGGCCTTTTCCATTCCAAGCCATGGAGGTAATGTGTAGAGAAGAGACAACCACATTTCAAGAAGAGAGAAAGTAACTGGAT-AAAAGAAGCAGGACTGCCCGCTTTAGGAGACAACATAGAGATACTTGCC-ACGTCC s panTro5.chr5 5298115 1690 - 181907262 aaaacactaccccttgctccattgcctttgctacccttgaattgcctttgctcctatgtcaaagatcagttgactacttgtataggtctatt-tctggtctctgttctgttccattgatctatt-catctattcttttactaatactacactgtcttgattactgtagcgttacag-taagtc--ttgaa-tcagatattatt----ggtcccctgactgtttttccttagtactgtgttggctattctgggtcattcatctttccatgtaaattttagaaccagtttgtcaaaatccacaaaataacttgctgaaattttgactgggatggcattgaatctatagatcaactgacatcttggcaatattgagtcttcctcttcataaacatgaagtatctatttatttagacttcttttgatttctttaatcagttttgtagttttcatcatgtagatct----tatacatattttattagattcataaccaagt------a-ttttt-aatgctaatataaatggtattgtgtttgaaatttcaaatttcagtggttcattgctggtatataggaaaacaattgacttatgtataaaccttttatcctggcaagcttgctataattgatcattggttcagg------tttgttaa---ttctttaggatttttcta-tataaaaatcatgtcatctgtgaacaaggacagttttcatttatttctttccagtctgtgtatatttatctccttttcttgtcttaggtcatcagctagaacttccagtacaatgttgaataggaatgatgagagagtacatcctaatcttagggggaagacatccagtttctcatcatgaagtatgacagtagctgtagg-ttttttatagatgttctgtattaaactgaggaatttctcctctatttctagtttgctgaatttttatcgagatggaggttggattttgtcaactgctttttatccatttattcatatgagcatatga--tttttttctttagcttcttgatgtgacagattatatttattga--cttgaatg-ttTTTTAAAAC----TGTACAGATACTGTGATGATTTTAATTGCATATGAAATTAACTTCG-----TTATCTTCAGGC----TTATCACATCAAAGGTTTACTTGCAAAATT--------------------------------------------GGACCTTTGTTCTTATTCAGTAAATCCGTGTTACAAGATGAGCCAGGATTTAGATATGTAAATATATGTAACTTTTTAGTATCTTTCATTTCAAATTAGAACCACATATTTGGAATTTACTGCTGTAGTCTCGTGATAATGGCTGACATGAGAAGACATT-TAAAAAAATCCTGAAGTTATCCATGCTTGCTGTTTATTTAGTCTTCTTGTTTGGAATAAAAAGTAAATAATTCACAAATACTACCACCTAAGCCCCTGTTTCAAATGAAACATCAGTCTTCAGCTTGCAAAATAATGTCTTTATAATTAAGGAAATAGCAGCAGAAAACCTATGCTAGTTGCTTTTTTCTTCCTGGAGAAGTTGACAGGATAACTGCAATCCTAGGGGCATCTCTGTGTTGAATCTGAGACGTGGAACAAAAAGAAAAGTGGCCTTTTCCATTCCAAGCCATGGAGGTAATGGGGAGAGAAGAGACAACCACATTTCAAGAACAGAGAAAGTAACTGGAT-AAAAGAAGCAGGACTGCCCGCTTTAGGAGACAACATAGAGATACTTGCC-ACGTCC i panTro5.chr5 C 0 C 0 s panPan2.chr5 5560725 1692 - 183735486 aaaacactaccccttgctccattgcctttgctacccttgaattgcctttgctcctatgtcaaagatcagttgactacttgtataggtctatt-tctggtctctgttctgttccattgatctatt-catctattcttttactaatactacactgtcttgattactgtagcgttacag-taagtc--ttgaa-tcagatattatt----ggtcccctgactgtttttccttagtactgtgttggctgttctgggtcattcatctttccatgtaaattttagaaccagtttgtcaaaatccacaaaataacttgctgaaattttgactgggatggcattgaatctatagatcaactgacatcttggcaatattgagtcttcctcttcataaacatgaagtatctatttatttagacttcttttgatttctttaatcagttttgtagttttcatcatgtagatct----tatacatattttattagattcataaccaagt------a-ttttt-aatgctaatataaatggtattgtgtttgaaatttcaaatttcagtggttcattgctggtatataggaaaacaattgacttatgtataaaccttttatcctggcaagcttgctataattgatcattggttcagg------tttgttaa---ttctttaggatttttcta-tataaaaatcatgtcatctgtgaacaaggacagttttcatttatttctttccagtctgtgtatatttatctccttttcttgtcttaggtcatcagctagaacttccagtacaatgttgaataggaatgatgagagagtacatcctaatcttagggggaagacatccagtttctcatcatgaagtatgacagtagctgtagg-ttttttatagatgttctgtattaaactgaggaatttctcctctatttctagtttgctgaatttttatcgagatggaggttggattttgtcaaatgctttttatccatttattcatatgagcatatga--tttttttctttagcttcttgatgtgacagattatatttattgacttttgaatg-ttTTTTAAAAC----TGTACAGATACTGTGATGATTTTAATTGCATATGAAATTAACTTCG-----TTATCTTCAGGC----TTATCACATCAAAGGTTTACTTGCAAAATT--------------------------------------------GGACCTTTGTTCTTATTCAGTAAATCCGTGTTACAAGATGAGCCAGGATTTAGATATGTAAATATATGTAACTTTTTAGTATCTTTCATTTCAAATTAGAACCACATATTTGGAATTTACTGCTGTAGTCTCGTGATAATGGCTGACATGAGAAGACATT-AAAAAAAATCCTGAAGTTATCCATGCTTGCTGTTTATTTAGTCTTCTTGTTTGGAATAAAAAGTAAATAATTCACAAATACTACCACCTAAGCCCCTGTTTCAAATGAAACATCAGTCTTCAGCTTGCAAAATAATGTCTTTATAATTAAGGAAATAGCAGCAGAAAACCTATGCTAGTTGCTTTTTTCTTCCTGGAGAAGTTGACAGGATAACTGCAATCCTAGGGGCATCTCTGTGTTGAATCTGAGACGTGGAACAAAAAGAAAAGTGGCCTTTTCCATTCCAAGCCATGGAGGTAATGTGGAGAGAAGAGACAACCACATTTCAAGAACAGAGAAAGTAACTGGAT-AAAAGAAGCAGGACTGCCCGCTTTAGGAGACAACATAGAGATACTTGCC-ACGTCC i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1692249 1689 + 3967317 aaaacactaccccttgctccattgcctttgctacccttgaattgcctttgctcctatgtcaaagatcagttgactacttgtataggtctatt-tctggtctctgttctgttccattgatctatt-catctattcttttactaatactacactgtcttgattactgtagcgttacagttaagtc--ttgaa-tcagatattatt----ggtcccctgactgtttttccttagtactgtgttggctattctgggtaattcatctttccatataaattttagaaccagtttgtcaaaatccacaaaataacttgctgaaattttgactgggatggcattgaatctatagatcaactgacatcttggcaatattgagtcttcctcttcataaacatgaagtatctatttatttagatttc-tttgatttctttaatcagttttgtagttttcgtcatgtagatct----tatacatattttattagattcataaccaagt------a-ttttt-aatgctaatataaatggtattgtgtttgaaatttcaaatttcagtggttcgttgctggtacataggaaaacaattgacttatgtataaaccttttatcctggcaagcttgctataattgatcattggttcagg------tttgttaa---ttctttaggatttttcta-tataaaaatcatgtcatctgtgaacaaggacagttttcatttatttctttccagtctgtgtatatttatctccttttcttgtcttaggtcatcagctagaacttccagtacaatgttgaataggaatgatgagagagtacatcctaaccttagggggaagacatccagtttctcatcatgaagtatgacagtagctgtagg-ttttttatagatgttctgtattaaactgaggaacttctcctctatttctagtttgctgaatttttatcgagatggaggttggattttgtcaaatgctttttatccatttattcatatgagcatatga---ttttttctttagcttcttgatgtgacagattatatttattgacttttgaatg--ttTTTAAAAC----TGTACAGATACTGTGATGATTTTAATTGCATATGAAATTAACTTCA-----TTATCTTCAGGC----TTATCACATCAAAGGTTTACTTGCAAAATT--------------------------------------------GGACCTTTGTTCTTATTCAGTAAATCCGTGTTACAAGATGAGCCAGGATTTAGATATGTAAATATATGTAACTTTTTAGTATCTTTCATTTCAAATTAGAACCACGTATTTGGAATTTACTGCTGTAGTCTCGTGATAATGGCTGACATGAGAAGACATT--AAAAAAATCCTGAAGTTATCCATACTTGCTGTTTATTTAGTCTTCTTGTTTGGAACAAAAAGTAAATAATTCACAAATACTACCACCTAAGCCCCTGTTTCAAATGAAACATCAGTCTTCAGCTTGCAAAATAATGTCTTTATAATTAAGGAAATAGCAGCAGAAAACTTATGCTAGTTGCTTTTTTCTTCCTGGAGAAGTTGACAGGATAACTGCAATCCTAGGGGCATCTCTGTGTTGAATCTGAGATGTGGAACAAAAAGAAAAGTCGCCTTTTCCATTCCAAGCCATGGAGGTAATGTGTAGAGAAGAGACAACCACATTTCAAGAACAGAGAAAGTAACTGGAT-AAAAGAAGCAGGACTACCCGCTTTAGGAGACAACATAGAGATACTTGCC-ACGTCC i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4568843 1697 + 163208435 aaaacactaccccttgctccattgcctttgctacccttgaattgcctttgctcctttgtcaaagatcagttgactacttgtataggtctact-tctggtctctgttctgttccattgatctatt-catctattcttttactaatagtacactgtcttgattactgtagctttacag-taagtc--ttgaagtcagatattatt----gatcccctgactgtctttccttagtactgtgttggctattctgggtcgttcatctttccatataaattttagaatcagtttgtcaaaatccacaaaataacttgctgaaatttttactgggatggcattgaatctatagatcaactgacatcttggcaatattgaatcttcctctccataaacatgaagtatc----tatttagatttcttttgatttctttaatcagttttgtagttttcctcatatagatct----tatacatattttattagattcgtaaccaagt------atttttt-aatgctaatataaatggtattttgtttgaaatttcagatttcagtggtttgttgctggtatataggaaaa-aattgacttatgtgtaaaccttttatcctggcaaacttgctataattgatcattggttccagttttcttttgttaa---ttctttaggatttttcta-tataaaaatcatgtcatctgtgaacaaggacagttttcatttatttctttccaatctgtgtatatttatctccttttcttgtcttagggcatcagctagaacttccagtacaatgttgaaaaggaatgatgagagagtacatcctaatcttagggagaagacatccagtttctcatcatgaagtatgacagtagctgtagg-ttttttatagatgttctgtattaagttgaggaatttctcctctatttctagtttgctgaatttttatcgagatggaggttggattttgtcaaatgctttttatccatttattcatatgagcatatga--tttttttctttagcttcttgatgtgacagattatatttattgacttttgaatg-ttTTTTAAAACTATTTGTACAGACATTGTGATGATTTTAATTGCATATGAAATTAACTTTG-----TTATCTTGAGGC----TTATCACATCAAAGGTTTACTTGCAAAATT--------------------------------------------GGACCTTTGTTCTTGTTCAGTAAATCCATGTTACAGGATGAGCCAGGATTTACATATGTAAATATATGTAACTTTTTAGCATCTTTCATTTCAAATTAGAACCACGTATTTGGAATTTACTGCTGTAGTCTCGTGATAATGGCTGACATGAGAAGACATTTAAAAAAAATCCTGAAGTTATCCATATTTGC----TATTTAGTCGTCTTGTTTGGAACGAGAAGTAAATAATTCACAAATACTACCACCTAAGCACCTGTTTCAAATGAAACATCGGTCTTCAGCTTGCAAAATAATGTCTTTATAATTAAGGAAATAGCAGCAGAAAACCTATGCTAGTTGCTTTTTTCTTCCTGGAGAAGTTGACAGGATAAGTGCAATCCTAGGGGCATCTCTGTGTTGAATCTAAGAGGTGGAACAAAAAGAAAGGTGGCCTTTTCCATTCCAAGCCATGGAGGTAATGTGCAGAGAAGAGACAACCACATTTCAAGAATAGAGAAAGTAACTGGAT-AAAAGAAGCAGGACTGCCCACCTTAGGAGACAACATAGAGATACTTGCCAAAGTCC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5749234 1706 - 180051392 agaagactaccgcttgctccattgcctttgctacccttgaattgcctttgctcctttgtcaaagatcagttgcctacttgtatgggtctatt-tctggtctgtgttctgttccgctgatctgttccatctattcttttactaatactacactgtcttgattactgtacctttacag-taagtcttttaag-tcagatattatt----ggttccctgactgtttttcttt-atactgtgttggctattctgggtcgttcatctttccatataaattttagaaccagtttatcaatatccacaaaataacttgctgaaattttgactgggatggcattgaatctatagatcaactgacatcttggtgatattgagtcttcctctccataaacatgaagtatctattcatttagatttattttcatttctttaatcagttttgtagttttcctcatatagatct----tatacatattttattagatttgtaaccaagt------atttttt-aatgctaatataaatggtattgtgtctgaaatttcaaatttcagtggtttgttgctggtatatatgaaaacaattgacttatgtttaaatcttttgtcctggcaagcttgctataattgatcattggttccagttttcttttgttaa---ttctttaggatttttcca-tataaaaatcatgtcatctgtgaacaaggacagttttcattgatttctttctaatctgtgtatatttatctccttttcttgtcttagggcaccagctagaacttccagtacaatgttgaataggaatgatgagagagtacatcctaatcttagggggaagacatccagtttctcataatgaggtatgagaggagctgtagg-ttttttatagatgttctgtattaaattgaggaatttctcctctatttctagtttgctgaatttttatcaagatggaggttggattttgtcaaatgctttttatccatttattcatatgagcatatga--tttttttctttagcttcttgatgtgacagattatatttattgacttttgaccg-ttTTTAAAAACTATTTGTACAGACACTGTGATGATTTTAATTGCATATGAAATTAACTTTGTTATCTTATCTTCAGGCTTCTTTATCACATCAAAGGTTTACTTGCAAAATT--------------------------------------------GAACCATTGTTCTTATTCAGTAAATCCATGTTACAAGATGAGCCAGGATTTAGATATGTAAATATATGTAACTTTTTAGCATCTTTCATTTCAAATTAGAACCACGTATTTAGAATTTACTGCTGTAGTCTCGTGATAATGGCTGACATGAGAAGACATT--AAAAAAATCCTGAAGTTATCCATACTTGCTGTTGATTTAGTTTTCTTATTTGGAACGAAAAGTAAATAATTCACAAATACTGCCACCTAAGCACCTGTTTCAAATGAAGCATCA---TTCAGCTTGCAAAATAATGTC-TTATAATTAAAGAAAT---AGCAGAAAACCTATGCTAGTTGCTTTTTTCTTCCTGGAGAAGTTGACAGGATAACTGCAATCCTAGGGACGTCTCTGTGTTGAATCTGAGAGGTGGAACAAAAAGAAAAGTGGCCTTTTCCATTCCAAGCCATGGAGGTAATGTGTAGAGAAGAGACAACCACATTTAAAGAATACAGAAAGTAACTGGAT-GAAAGAAGCAGGACTGCCCACTTTAGGAGACAACATAGAGATACTTGCC-AAGTCC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5935689 1707 - 181584905 agaagactaccgcttgctccattgcctttgctacccttgaattgcctttgctcctttgtcaaagatcagttgcctacttgtatgggtctatt-tctggtctgtgttctgttccgctgatctgttccatctattcttttactaatactacactgtcttgattactgtacctttacag-taagtcttttaag-tcagatattatt----ggttccctgactgtttttctttaatactatgttggctattctgggtcgttcatctttccatataaattttagaaccagtttatcaatatccacaaaataacttgctgaaattttgactgggatggcattgaatctatagatcaactgacatcttggtgatattgagtcttcctctccataaacatgaagtatctattcatttagatttattttcatttctttaatcagttttgtagttttcctcatatagatct----tatacatattttattagatttgtaaccaagt------atttttt-aatgctaatataaatggtattgtgtctgaaatttcaaatttcagtggtttgttgctggtatatatgaaaacaattgacttatgtttaaatcttttgtcctggcaagcttgctataattgatcattggttccagttttcttttgttaa---ttctttaggatttttcca-tataaaaatcatgtcatctgtgaacaaggacagttttcattgatttctttctaatctgtgtatatttatctccttttcttgtcttagggcaccagctagaacttccagtacaatgttgaataggaatgatgagagagtacatcctaatcttagggggaagacatccagtttctcataatgaggtatgagaggagctgtagg-ttttttatagatgttctgtattaaattgaggaatttctcctctatttctagtttgctgaatttttatcaagatggaggttggattttgtcaaatgctttttatccatttattcatatgagcatatga--tttttttctttagcttcttgatgtgacagattatatttattgacttttgaccg-ttTTTAAAAACTATTTGTACAGACACTGTGATGATTTTAATTGCATATGAAATTAACTTTGTTATCTTATCTTCAGGCTTCTTTATCACATCAAAGGTTTACTTGCAAAATT--------------------------------------------GAACCATTGTTCTTATTCAGTAAATCCATGTTACAAGATGAGCCAGGATTTAGATATGTAAATATATGTAACTTTTTAGCATCTTTCATTTCAAATTAGAACCACGTATTTAGAATTTACTGCTGTAGTCTCGTGATAATGGCTGACATGAGAAGACATT--AAAAAAATCCTGAAGTTATCCATACTTGCTGTTTATTTAGTTTTCTTATTTGGAACGAAAAGTAAATAATTCACAAATACTGCCACCTAAGCACCTGTTTCAAATGAAACATCA---TTCAGCTTGCAAAATAATGTC-TTATAATTAAAGAAAT---AGCAGAAAACCTATGCTAGTTGCTTTTTTCTTCCTGGAGAAGTTGACAGGATAACTGCAATCCTAGGGACGTCTCAGTGTTGAATCTGAGAGGTGGAACAAAAAGAAAAGTGGCCTTTTCCATTCCAAGCCATGGAGGTAATGTGTAGAGAAGAGACAACCACATTTAAAGAATACAGAAAGTAACTGGAT-AAAAGAAGCAGGACTGCCCACTTTAGGAGACAACATAGAGATACTTGCC-AAGTCC i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 966108 1696 - 16193990 agaagactaccgcttgctccattgcctttgctacccttgaattgcctttgctcctttgtcaaagatcagttgcctacttgtatgggtctatt-tctggtctgtgttctgttccgctgatctgttccatctattcttttactaatactacactgtcttgattactgtacctttacag-taagtcttttaag-tcagatattatt----ggttccctgactgtttttctttaatactgtgttggctattctgggtcgttcatctttccatataaattttagaacccgtttatcaatatccacaaaataacttgctgaaattttgactgggatggcattgaatctatagatcaactgacatcttggtgatattgagtcttcctctccataaacatgaagtatctattcatttagatttattttcatttcttttatcagttttgtagttttcctcatatagatct----tatacatattttattagatttgtaaccaagt------atttttt-aatgctaatataaatggtattgtgtctgaaatttcaaatttcagtggtttgttgctggtatatatgaaaacaattgacttatgtttaaatcttttgtcctggcaagcttgctataattgatcattggttccagttttcttttgttaa---ttctttaggatttttcta-tataaaaatcatgtcatctgtgaacaaggacagttttcattgatttctttctcatctgtgtatatttatctccttttcttgtcttagggcaccagctagaacttccagtacaatgttgaataggaatgatgagagagtacatcctaatcttagggggaagacatccagtttctcataatgaggtatgagaggagctgtagg-ttttttatagatgttctgtattaaattgaggaatttctcctctatttctagtttgctgaatttttatcaagatggaggttggattttgtcaaatgctttttatccatttattcatatgagcatatga--tttttttctttagcttcttgatgtgacagattatatttattgacttttgaccg-ttTTTAAAAACTATTTGTACAGACACTGTGATGATTTTAATTGCATATGAAATTAACTTTGTTATCTTATCTTCAGGCTTCTTTATCACATCAAAGGTTTACTTGCAAAATT--------------------------------------------GAACCATTGTTCTTATTCAGTAAATCCATGTTACAAGATGAGCCAGGATTTAGATATGTAAATATATGTAACTTTTTAGCATCTTTCATTTCAAATTAGAACCACGTATTTAGAATTTACTGCTGTAGTCTCGTGATAATGGCTGACATGAGAAGACATT--AAAAAAATCCTGAAGTTATCCATACTTGCTGTTTATTTAGTTTTCTTATTTGGAATGAAAAGTAAATAATTCACAAATACTGCCACCTAAGCACCTGTTTCAAATGAAACATCA---TTCAGCTTGCAAAATAATGTC-TTATAATTAAAGAAAT---AGCAGAAAACCTATGCTAGTTGCTTTTTTCTTCCTGGAGAAGTTGACAGGATAACTGCAATCCTAGG-----------GTTGAATCTGAGAGGTGGAACAAAAAGAAAAGTGGCCTTTTCCATTCCAAGCCGTGGAGGTAATGTGTAGAGAAGAGACAACCACATTTAAAGAATACAGAAAGTAACTGGAT-AAAAGAAGCAGGACTGCCCACTTTAGGAGACAACATAGAGATACTTGCC-AAGTCC i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1787256 1705 - 21434487 agaagactaccccttgctccattgcctttgctacccttgaattgcctttgctcctttgtcaaagatcagttgcctacttgtgtgggtctatt-tctggtctgtgttctgttccactgatctgttccatctattcttttactaatactatactgtcttgattactgtacctttacag-taagtcttttaag-tcagatattatt----ggttccctgactgtttttctttaatactgtgttggctattctgggtcgttcatctttccatataaattttagaaccagtttatcaatatccacaaaataacttgctgaaattttgactgggatggcattgaatctatagatcaactgacatcttggtgatattgagtcttcctctccataaacatgaagtatctattcatttagatttcttttcatttctttaatcagttttgtagttttcctcatatagatct----tatacatattttattagatttgtaaccaagt------atttttt-aatgctaatataaatgatattgtgtctgaaatttcaaatttcagtggtttgttgctggtatatatgaaaacaattgacttatgtttaaatcttttg--ctggcaagcttgctataattgatcattggttccagttttcttttgttaa---ttctttaggatttttcta-tataaaaatcatgtcatctgtgaacaaggacagttttcattgatttctttctactctgtgtatatttatctccttttcttgtcttagggcaccagctagaacttccagtacaatgttgaataggaatgatgagagagtacatcctaatcttagggggaagacatccagtttctcataatgaggtatgacaggagctgtagg-ttttttatagatgttctgtattaaattgagaaatttctcctctatttctagtttgctgaatttttatcaagatggaggttggattttgtcaaatgctttttatccatttattcatatgagcatatga--tttttttctttagcttcttgatgtgacagattatatttattgacttttgaccg-ttTTTTAAAACTATTTGTACAGACACTGTGATGATTTTAATTGCATATGAAATTAACTTTGTTATCTTATCTTCAGGCTTCTTTATCACATCAAAGGTTTACTTGCAAAATT--------------------------------------------GAACCATTGTTCTTATTCAGTAAATCCATGTTACAAGAGGAGCCAGGATTTAGATATGTAAATATATGTAACTTTTTAGCATCTTTCATTTCAAATTAGAACCACGTATTTAGAATTTACTGCTGTAGTCTCGTGATAATGGCTGACATGAGAAGACATT--TAAAAAATCCTGAAGTTATCCATACTTGCTATTTATTTAGTCTTCTTGTTTGGAACGAAAAGTAAATAATTCACGAATACTGCCACCTAAGCACCTGTTTCAAATGAAACATCA---TTCAGCTTGCAAAATAATGTC-TTATAATTAAAGAAAT---AGCAGAAAACCTATGCTAGTTGCTTTTTTCTTCCTGGAGAAGTTGACAGGATAACTGCAATCCTAGGGACATCTCTGTGTGGAATCTGAGAGGTGGAACAAAAAGAGAAGTGGCCTTTTCCATTCCAAGCCATGGAGGTAATGTGTAGAGAAGAGACAACCACATTTAAAGAATACAGAAAGTAACTGGAT-AAAAGAAGCAGGACTGCCGACTTTAGGAGACAACATAGAGATACTTGCC-AAGTCC i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4749777 1710 - 82825804 agaagactaccccttgctccattgcctttgctacccttgaattgcctttgctcctttgtcaaagatcagttgcctacttgtatgggtctatt-tctggtctgtgttctgttccactgatctgttccatctattcttttactaatactacactgtcttgattactgtacctttacag-taagtcttttaag-tcagatattatt----ggttccctgactgtttttctttaataccgtgttggctattctgggtcgttcatctttccatataaattttagaaccagttattcaatatccacaaaataacttgctgaaattttgactgggatggcattgaatctatagatcaactgacatcttggtgatattgagtcttcctctccataaacatgaagtatctatttatttagatttcttttcatttctttaatcagttttgtagttttcctcttatagatct----tatacatattttattagatttgtaaccaagt------atttttt-aatgctaatataaatggtattgtgtctgaaatttcaaatttcagtggtttgttgctggtatttatgaaaacaattgacttatgtttaaaccttttgtcctggcaagcttgctataattgatcattggttccagttttcttttgttaa---ttctttaggatttttcta-tataaaaatcatgtcatctgtgaacaaggacagttttcattgatttctttctaatctatgtatatttatctccttttcttgtcttagggcaccagctagaacttccagtacaatgttgaataggaatgatgagagagtacatcctaatcttagagggaagacatccagtttctcataatgaggtatgacaggagctgtagg-ttttttatagatgttctgtattaaattgaggaatttctcctctatttctagtttgctgaatttttatcaagatggaggttggattttgtcaaatgctttttatccatttattcatatgagcatatga--tttttttctttagcttcttgatgtgacagattatatttattgacttttgaccg-ttTTTAAAAACTATTTGTACAGACACTGTGATGATTTTAATTGCATATGGAATTAACTTTGTTATCTTATCTTCAGGCTTCTTTATCACATCAAAGGTTTACTTGCAAAATT--------------------------------------------GAACCATTGTTCTTATTCAGTAAATCCATGTTACAAGATGAGCCAGGATTTAGATATGTAAATATATGTAACTTTTTAGCATCTTTCATTTCAAATTAGAACCACGTATTTAGAATTTACTGCTGTAGTCTCGTGATAATGGCTGACATGAGAAGACATT--AAAAAAATCCTGAAGTTATCCATACTTGCTATTTATTTAGTCTTTTTGTTTGGAACGAAAAGTAAATAATTCACAAATACTGCCACCTAAGCACCTGTTTCAAATGAAGCATCA---TTCAGCTTGCAAAATAATGTC-TTATAATTAAAGAAATAGCAGCAGAAAACCTGTGCTAGTTGCTTTTTTCTTCCTGGAGAAGTTGACAGGGTAACTGCAATCCTAGGGGCATCTCTGTGTTGAATCTGAGAGGTGGAACAAAAAGAAAAGTGGCCTTTTCCATTCCAAGCCATGGAGGTAATGTGTAGAGAAGAGACAACCACATTTAAAGAATACAGAAAGTAACTGGAT-AAAAGAAGCAGGACTGCCCACTTTAGGAGACAACATAGAGATACTTGCC-AAGTCC i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 255378 1707 + 2521317 agaagactaccccttgctccattgcctttgctacccttgaattgcctttgctcctttgtcaaagatcagttgcctacttgtgtgggtctatt-tctgatctgtgttctgttccactgatctgttccatctattcttttactaatactatactgtcttgattactgtacctttacag-taagtcttttaag-tcagatattatt----ggttccctgactgtttttctttaatactgtgttggctattctgggtcgttcatctttccatataaattttagaaccagtttatcaatatccacaaaataacttgctgaaattttgactgggatggcattgaatctatagatcaactgacatcttggtgatattgagtcttcctctccataaacatgaagtatctattcatttagatttcttttcatttgtttaatcagttttgtagttttcctcatatagatct----tatacatattttattagatttgtaaccaagt------atttttt-aatgctaatataaatggtattgtgtctgaaatttcaaatttcagtggtttgttgctggtatatatgaaaacaattgacttatgtttaaatcttttgtcctggcaagcttgctataattgatcattggttccagttttcttttgttaa---ttctttaggatttttcta-tataaaaatcatgtcatctgtgaacaaggacagttttcattgatttctttctactctgtgtatatttatctccttttcttgtcttagggcaccagctagaacttccagtacagtgttgaataggaatgatgagagagtacatcctaatcttagggggaagacatccagtttctcataatgaggtatgacaggagctgtagg-ttttttatagatgttctgtattaaattgaggaatttctcctctatttctagtttgctgaatttttatcaagatggaggttggattttgtcaaatgctttttatccatttattcatatgagcatatga--tttttttctttagcttcttgatgtgacagattatatttattgacttttgaccg-ttTTTTAAAACTATTTGTACAGACACTGTGATGATTTTAATTGCATATGAAATTAACTTTGTTATCTTATCTTCAGGCTTCTTTATCACATCAAAGGTTTACTTGCAAAATT--------------------------------------------GAACCATTGTTCTTATTCAGTAAATCCATGTTACAAGATGAGCCAGGATTTAGATATGTAAATATATGTAACTTTTTAGCATCTTTCATTTCAAATTAGAACCACGTATTTAGAATTTACTGCTGTAGTCTCGTGATAATGGCTGACATGAGAAGACATT--TAAAAAATCCTGAAGTTATCCATACTTGCTATTTATTTAGTCTTCTTGTTTGGAACGAAAAGTAAATAATTCACGAATACTGCCACTTAAGCACCTGTTTCAAATGAAACATCA---TTCAGCTTGCAAAATAATGTC-TTATAATTAAAGAAAT---AGCAGAAAACCTATGCTAGTTGCTTTTTTCTTCCTGGAGAAGTTGACAGGATAACTGCAATCCTAGGGACATCTCTGTGTGGAATCTGAGAGGTGGAACAAAAAGAAAAGTGGCCTTTTCCATTCCAAGCCATGGAGGTAATGTGTAGAGAAGAGACAACCACATTTAAAGAATACAGAAAGTAACTGGAT-AAAAGAAGCAGGACTGCCCACTTTAGGAGACAACATAGAGATACTTGCC-AAGTCT i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1736815 1756 - 2415367 agaggactaccccttgctccattgcctttgctacccttgaattgcctttgctcctttgtcaaagatcagttacctacttgtatgggtctatt-tctggtctgtgttctgttccactgatctgttccatctattcttttactaatactacactgtcttgattattgtacctttacag-taagtcttttaag-tcagatattatt----ggttccctgactgtttttctttaatactgtgttggctattccgggtcgttcatctttccatataaattttagaaccagtttatcaatatccacaaaataacttgccgaaattttgactgggatggcattgaatctatagatcaactgacatcttggtgatgttgagtcttcctctccataaacatgaagtatctatttatttagatttcttttcatttctttaatcagttttgtagttttcctcatatagatct----tatacatattttattagatttgtaaccaagt------attttttaaatgctattataaatggtattgtgtctgaaatttcaaatttcagtggtttgttgctggtatatatgaaaacaattgacttatgtttaaaccttttgtcctggcaagcttgctacaattgatcattggttccagttttcttttgttaa---ttctttaggatttttcta-tataaaaatcatgtcatctgtgaacaaggacagttttcattgatttctttctaatctgtgtatatttatctccttttcttgtcttagggcaccagctagaacttccagtacaatgttgaataagaatgatgagagagtacatcctaatcttagggggaagacatccagtttctcataatgaagtatgacaggagctgtagg-ttttttatagatgttctgtattaaattgaggaatttctcctctatttctagtttgctgaatttttatcaagatggaggttggattttgtcaaatgctttttatccatttattcatatgagcatgtga--tttttttctttagcttcttgatgtaacagattatatttattgacttttgaccgttTTTTTAAAACTATTTGTACTGACACTGTGATGATTTTACTTGCATATGAAATTAACTTTGTTATCTTATCTTCAGGCTTCTTTATCACGTCAAAGGTTTACTTGCAAAATTGGACTTATCACATCAAAGGTTTACTTGCAAAATTGGACTTACTGGACTTATTGTTCTTATTCAGTAAATCCATGTTACAGGATGAGTCAGGATTTAGATATGTAAATATATGTAACTTTTTAGCATCTTTCATTTCAAATTAGAACCACGTATTTAGAATTTACTGCTGTAGTCTCGTGATAATGGCTGACATGAGAAGACATT--AAAAAAATCCTGAAGTTATCCATACTTGCTATTTATTTAGTCTTCTTGTTTGGAACGAAAAGTAAGTAATTCACAAATACTGCCACCTAAGCACCTGTTTCAAATGAAACATCA---TTCAGCTTGCAAAATAATGTC-TTATAATTAAAGAAATAGCAGCAGAAAACCTATGCTAGCTGCTTTTTTCTTCCTGGGGAAGTTGACAGGATAACTGCAATCCTAGGGGCACCTCTGTGTTGAATCTGAGAGGTGGAACAAAAAGAAAAGTGGCCTTTTCCATTCCAAGCCATGGAGGTAATGTGTAGAGAAGAGACAACCACATTTAAAGAATACAGAAAGTAACTGGGT-AAAAGAAGCAGGACTGCCCACTTTAGGAGACAACATAGAGATACTTGCC-AAGTCC i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64079591 1701 + 204313951 aaaagactacc-cttgctccattgcctttgctatccttgaattgcctttgctcctttggcaaagatcagttgactacttgtataggtctattctttagtctctgttctgttctgttgatctatt-catctattcttttgctaatactatactgtcttgattactgtagctttacag-taagtc-ttgaag-tcagatattatttgtatgttccctgactgtttttccttagtactgtgttggatattctgggtctttcatctttccatatacattttagaaccggtttgtccatacccacagaataac--gctgaaattttgactgggatggcattgaatctatacatcaactgacatcttggcaatattgagtcgtcttctccataaacatgaaatatctatttatttagat-gtt-----tttctttcctcagttttgtagttttcctcatatagatct--tatacatatattttattagagttgtaaccaaatattta-ttttttt-aatgctaatataaatggtattgtatttgaaatttcaaatttcaatggtttgttgccagtatcaaggaaaacaattgacttatgtattaaccgtttatcctggtaacgttgctataattgatcactggttccagttttcttttgttaa---ttctttaggattttttgaacataaaattcatgtcatttgtgaacaagtacag-tttcatttatttctttccaatctgtgtatattgatctccttttcttgtcgtagggtatcagttggaacttccagtacagtgttgtgtagga---atgagagagtacatcctaatctta-agggaagacatccagtttctcattatgaagcaagacattagctgtagg-ttttttatagatgttctgtattaaatagaggaatttctcctatatttctagtttgctgaatttttatcatgatggaggttggattttgtcaaa-gctttttatccatttattcatataagcatatgatttttttttctttagcttcttggtgtgatagattatatttattgacttttgaatg-ttTTTAAAAACTACTTGTGCAGAGACTGTGATGATTTTAATTGCATATAAAA-TCACTTTGTTATCTTGTCTTTAGGCTTCTTTATCACATCAAAGGTTTACTCGCAAAATT--------------------------------------------GGTCCTTTGTTCTTATTCAGTAAATCCATGTTACAGGATGAGCCAGGATTTAGATATGTAAATATATGTAACTTCTTAGCATCTTTCATTTCAAATTAGAACCACATACTTGGAATTTGCTGCTGTAGTCTGATGATAATGGCTGACAGAAG----------AAAAAAATCCTAAAGTTATCAGTTTTTGCTGTTTA--TAGTCTTCTTGTTTGAAATGTAAAGTAAATTGTTCACAAATATTACCACCTAAGCACCTGTTTCAAAGGAAACATCAATCTTCAGCTTGCAAAATGATGTCTTTATAGTTAAGGACATAGTGGCAGAAGACCCATGTTAGTTGCTTTTTTCTTCCTGGAGAAGTTGTCAGGATAACTGCAATCCTGGGGGCTTCTCCGTGTTGAATCTGAGAGGTGGAACAAAAAGAAAAGTGGCCTTTTCCATTTCAAGCCACGGAGGTAATGTGTGGAGAAGAGACGTCCACATTTCAAGAATAGAGAAAGTAACTGGAT-AAAAAAAGTAGGGCTGCCTGCTTTAGGAGACAACGTAGAGACACTTGCC-AAGTCC i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2206279 1703 + 10068113 aaaagactacc-cttgctccattgcctttgctatccttgaattgcctttgctcctttgtcaaagatcaattgactacttgtataggtctattctttggtctctgttctgttctgttgatctatt-catctgttcttttgctaatactatactgtcttgattactgtagctttacag-taagtc-ttgaag-tcagatattatttgtctgttccctgactgtttttccttagtactgtgttggatattctgggtctttcatctttccatatacattttagaaccagtttgtcaatatccacagaataac--gctgaaattttgactgggatggcgttgaatgtatacatcagctgacatcttggcaatattgagtcttcttctccataaacatgaaatatctatttatttagat--tt-----tttctttcttcagttttgtagttttcctcatatagatct--tatatatatatattattagatttgtaaccaaatattta-ttttttt-aatgctaatataaatggtattgtatttgagatttcaaatttcaatggtttgttgccagtataaaggaaaacaattgacttatgtattaaccttttatcctggcaacgttgctataattgatcattggttccagttttcttttgttaa---ttctttaggattttttaaacataaaaatcatgtcatctgtgaacaaggacag-tttcatttatttctttccaatctatgtatatttatctccttttttggtcttagggtatc-gttggaaattccagtacaatgttgtgtggga---atgagagagtacatcctaatcttagggggaagacatccagtttctcatcatgaagtatgacattagctgtagg-ttttttatagatgttctgtattaaatagaggaatctctcctctatttctagtttgctgaatttttatcacgatggaggttggattttgtcaaaggctttttatccatttattcatctgagcatatga--tttttttctttagcttcttgatgtgatagattatatttattgacttttgaatg-ttTTTAAAAACTACTTGTGCAGAGACTGTGATGATTTTAATTGCATATGAAATTCACTTTGTTATCTTGTCTTTAGGCTTCTTTGTCACATCAAAGGTTTACATGCAAAATT--------------------------------------------GGTCCTTTGTTCTTATTCAGTAAATCCATGTTACAGGATGAGCCAGGATTTAGATATGTAAATATATGTAACTTCTTAGCATCTTTCATTTCAAATTAGAACCACATACTTGGAATTTGCTGCTGTAGTCTCATGATAATGGCAGATGGAAG----------AAAAAAATCCTGAAGTTATCAGTTCTTGCTATTTATTTAGTCTTCTTGTTTGGAATGAAAAGCAAATAATTCACAAATATTACCACCTAAGCACCTGTTTCAAAGGAAACATCAGTCTTCAGCTTGCAAAATGATGTCTTTATAATTAAGGACATAGTGGCAGAAGACCCATGTTAGTTGCTTTTTTCTTCCTGGAGAAGTTGACAGGATAACTGCAATCCTGGGGGCTTCTCCGTGTTGAATCTGAGAGGCGGAACAAAAAGAAAAGTGGCCTTTTCCATTTCAAGCCATGGAGGTAATGTGTAGAGAAGAGACGTCCACATTTCAGGAATAGAGAAAGTAACTGGATAAAAAAAAGCAGGGCTGCCCGCTTTAGGAGACAACGTAGAGACGCTTGCC-AAGTCC i saiBol1.JH378186 I 6174 C 0 s cebCap1.NW_016107999v1 61428 1703 - 709587 aaaagactacc-cttgctccattgcctttgctctgcttgaattgcctttgctcctttgtcgaagatcagttgacttcttgaataggtctattctttggtctctgttgtgttctgttgatctatt-catctattcttttgctaatactatgctgtcttgattactgtagctttacag-taagtc-ttgaag-tcagatattatttgtctgttccctgactgtttttccttagtactgtgttggatattctgggtctttcatctttccacatacatttgagaaccagtttgtcaatatctgcagaataac--gctgaaattttgactaggatggcattgaatctatacatcagctgacatcttggcaatattgagtcttcttctccataaacatgaaatatctatttatttagatttct-----tttctttcctcagttttgtagttttcctcatatagatat--tatatatatattttattagatttgtaaccaaatatttatttttttt-aatgctaatataaatggcattgtatttgaaatttcaaatttcaatggtttgttgccagtataaaggaaaacaattgacttatgtattaaccttttttcctggcaacattgctataattgatcattggttccagttttcttttgttaagtcttctttaggattttttaagcataaaaatcatgtcatctgtgaacaaggacag-ttttatttatttctttccaatctgtgtagatttatctccttttcttgtcttagggtatcagttggaaattccagcacaatgttgtgtagga---atgaaagagtacatcctaatcttagggggaagacatccagtttctcatcatgaagtatgacattagctgtagg-ttttttatagatgttctgtattaaatagaggaatttctcctctatttctagtttgctgaatttttatcacgatggaggttggattttgtcgaaggctttttatccatttagtcatataagcatatga--attttttctttagcttcttgatgtgatagattatatttattggcttttgaatg-ttTTTAAAAATTACTTGTGCAGAGACTGTGATGATTTTAATTGCATATGAAATTCACTTTGTTATCTTGTCTTTAGGCTTCTTTATCACATCAAAGGTTTACATGCAAAATT--------------------------------------------GGTCCTTTGTTCTTATTCAGTAAATCCATGTTACAGGATGAGCCAGGATTTAGATATGTAAATATATGTAACTTCTTAGCATCTTTCATTTCAAATTAGAACCACACACTTGGAATTTGCTGCTGTAGTCTCATGATAACGGCTGACAGAAG----------AAAAGAATCCTGAAGTTACCAGTTCTTGCTATTTATTTAGTCTTCTTGTTTGGAATGAAAAGTAAATAATTCACAAATATTATCACCCAAGCACCTGTTTCAAAGGAAACATCAGT------CTTGCAAAATGATGTCTTTATAATTAAAGACATAGTGGCCAAAGACCCATGTTAGTTGCTTTTTTCTTCCTGGAGAAGTTGACAGGATAATTGCAATCCTGGGGGCTTCTCTGTGTTGAATCTGAGAGGTGGAACAAAAAGAAAAGTGGCCTTTTCCATTTCAAGCCACGGAGGTAATGTGTAGAGAAGAGACGTCCACATTTCAAGAATAGAGAAAGTAACTGGAT-AAAAAAATCAGGGCTGCCCGCTTTAGGAGACAATGTAGAGACACTTGCC-AAGTCC i cebCap1.NW_016107999v1 C 0 M 1147 s aotNan1.NW_018501968v1 1161971 1702 - 2246441 aaaagactacc-cttgctccattgcctttgctatccttgaattgcctttgctcctttgtcaaagatcagttgactacttgtataggtctattctttggtctctgttctgttccgttgatctatt-catctattcttttgctaatactatactgtcttgattactgtagctttacag-taagtc-ttgaag-tcagatattaattgtctgttccctgactgtttttccttagtcctgtgttgtatattctgggtctttcatctttccaaatacattttagaaccagtttgtcaatatccacagaataac--gctgaaattttgactgggatggcattgaatctatacatcagctgacatcttggcaatattgagtcttcttctccataaacatgaaatatctatttatttagatttct-----tttctttcctcagttttgtagttttcctcatatagatcttatatatatatattttattagagttgtaactaaat------atttttt-aatgctaatataaatggtattgtatttgaaatttcaaatttcaatggtttgttgccagtataaaggaaaacaattgacttatgtattaaccttttattctggtaacgttgctacaattgatcattggttccagttttcttttgttaa---ttctttaggattttttaaacataagaatcatgtcatctgtgaacaaggactg-tttcatttatttctttccaatctgtgtagatttatctccttttcttgtcttagggtatgagttggaacttccagtacaatgttgtgtagga---atgagagagtacatcctaatcttagggggaagacatccagtttctcatcatgaagtatgacattagctgtaggtttttttatagatgttctgtattaaatagaggaatttctcctctgtttctagtttgctgaatttttatcacgatggaggttggattttgtcaaaggctttttatccatttattcatatgagcatatga--tttttttctttggcttcttgatgtgatagattatgtttattgacttttgaatg-ttTTTAAAAACTACTTGTGCAGAGACTGTGATGATTTTAATTGCAGATGAAATTCACTTTGTTATCTTGTCTTTAGGCTTCTTTATCACATCAAAGGTTTACTTGCAAAATT--------------------------------------------GGTCCTTTGTTCTTATTCAGTAAATCCATGTTACAGGATGAGCCAGGATTTAGATATGTAAATATATGTAACTTCTTAGCATCTTTCATTTCAAATTAGAACCACATACTTGGAATTTGCTGCTGTAGTCTCATGATAATGGCTGACAGAAG----------AAAAAGATCCTGAGGTTATCAGTTCTTGCTATTTATTTAGTCTTCTTGTTTGGAATGAAAAGTAAATAATTCACAAATATTACCACCTAAGCACCTGTTTCAAAGGAAACATCAGTCTTCAGCTTGCAAAATGATGTCTTTATAATTAAGGACATAGTGGCAGAAGACCCATGTTAGTTGCTTTTTTCTTCCTGGAGAAGTTGACAGGATAACTGCAATCCTGGGGGCTTCTCCGTGTTGAATCTGAGAGGTGGAACAAAAAGAAAAGTGGCCTTTTCCATTTCAAGCCACGGAGGTAATGTGTAGAGAAGAGACGTCCACATTTCAAGAATAGAGAAAGTAACTGGAT-AAAAAAAGCAGGGCTG-CTGCTTTAGGAGACAGCGTAGAGACACTTGCC-AAGTCC i aotNan1.NW_018501968v1 C 0 C 0 e mm10.chr13 65979384 6914 - 120421639 I e otoGar3.GL873522 1227194 7559 + 48283576 I e canFam3.chr4 37170079 847 + 88276631 I e proCoq1.NW_012152163v1 758448 6575 - 940639 I e dasNov3.JH562710 245691 6502 - 960158 I a score=9746547.000000 s hg38.chr5_KI270795v1_alt 51262 1182 + 131892 CGAGTTCAGA--------ATTTTTTTTTTTTTTTGAGATGCATATCAAGGCACCTAAAGTTCGAG-AAAAGATGTTCTTCCTGTGTTAAGGAAGCTGCACTGGGGTTAATTTAAAAAGATGTCAGAAGTCGCAGAGAagcggttctcaagcttttatggaacactgtcctgtttgagaatctgctgatattatggaccttcttctttctacaaaaatgtgtaattgtgcataaaatttccaatagtttatagtcacctacttaagaccTTTGCTTTAGAGTAGATTATTACTCCCCGCTGTAAGGTAGGGAAGAAAAATATTCCATTCCTTTCCTCTGGTTGATATCTTTTTTTCTTCTCCTTGCACAGTCCAACAGACACACTCGGCCTCCCAGAAAGCAGCTG-----GCCCCCTGGCCAAGAGGCCAGTTTGCAGCATCGTG-ATCATTCCACCATCTTTGCTGCCAtttgaatcttgaatcagctttgcgtacctgtaataaattccacttagccatggcatgtagttttttaaaaatacattgttgaatttgatttgctaatgttttgctgaagatttttgtatttatgttcttgaaagatgttgatctgaagtcttcctttcttgtaatttctttatctggttttgatattagggtaatgctggactcacagaataagttaagaagtg-----------------ttctggaagagatgatagagaattagtatcatttcttccttaagtggtacag-tttaccagtgaaatcagctggacctgatgttttctgttttggaaggttattaattctggttaaattttgttaaagat-acaggccta-tcagattgtctatttctctttgtgtgagttttggtagattgtgtccttcaagtaaatggtcaatttcaattaagttattaaattttggacatagagttgttgatgctcttttta-tttttttcttttttcttctgtgtaattatggg------taatttctatgtcttcaagttcactcatctttttttctgcgatgtctcatctgcttttaatcttagacaatatatttttcctcttaaacattataaattttatctctagaagtttgatttgggtattttgtatatcttccatatctctacctaatgttgaatttatagagtataattttcataactgttttaatg---tc---ctttgatga------ttttttttttttt s panTro5.chr5 5299805 1175 - 181907262 CGAGTTCAGA--------A-TTTTTTTTTTTTTTGAGATGCATATCAAGGCACCTAAAGTTCGAG-AAAAGATGTTCTTCCTGTGTTAAGGAAGCTGCACTGGGGTTAATTTAAAAAGATGTCAGAAGTCGCAGAGAagcggttctcaagcttttacggaacactgtcctgtttgagaatctgctgatattatggaccttcttctttctacaaaaatgtgtaattgtgcataaaatttccaatagtttatagtcacctacttaagaccTTTGCTTTAGAGTAGATTATTACTCCCCGCTGTAAGGTAGGGAAGAAGAATATTCCATTCCTTTCCTCTGGTTGATATCTTTTTTTCTTCTCCTTGCACAGTCCAACAGACACACTCGGCCTCCCAGAAAGCAGCTG-----GCCCCCTGGCCAAGAGGCCAGTTTGCAGCAGTGTG-ATCATTCCACCATCTTTGCTGCCAtttgaatcttgaatcagctttgcgtacctgtaataaattccacttagccatggcatgtagttttttaaaaatacattgttgaatttgatttgctaatgttttgctgaagatttttgtatttatgttcttgaaagatgttgatctgaagtcttcctttcgtgtaatttctttatctggttttgatattagggtaatgctggactcacagaataagttaagaagtg-----------------ttctggaagagatgatagagaattagtatcatttcttccttaagtggtacag-tttaccagtgaaatcagctggacctgatgttttctgttttggaaggttattaattctggttaaattttgttaaagataacaggccta-tcagattgtctatttctctttgtgtgagttttggtagattgtgtccttcaagtaattggtcaatttcaattaagttattaaattttggacatagagttgttgatgctcttttta-tttttttcttttttcttctgtgtaattatggg------taatttctatgtcttcaagttcactcatctttttttctgcgatgtctcatctgc------tcttagacaatatatttttcctcttaaacattataaattttatctctagaagtttgatttgggtattttgtatatcttccatatctctacctaatgttgaatttatagagtataattttcataactgttttaatg---tc---ctttgatga-------tttttttttttt i panTro5.chr5 C 0 C 0 s panPan2.chr5 5562417 1180 - 183735486 CGAGTTCAGA--------A--TTTTTTTTTTTTTGAGATGCATATCAAGGCACCTAAAGTTCGAG-AAAAGATGTTCTTCCTGTGTTAAGGAAGCTGCACTGGGGTTAATTTAAAAAGATGTCAGAAGTCGCAGAGAagcggttctcaagcttttacggaacactgtcctgtttgagaatctgctgatattatggaccttcttctttctacaaaaatgtgtaattgtgcataaaatttccaatagtttatagtcacctacttaagaccTTTGCTTTAGAGTAGATTATTACTCCCCGCTGTAAGGTAGGGAAGAAAAATATTCCATTCCTTTCCTCTGGTTGATATCTTTTTTCCTTCTCCTTGCACAGTCCAACAGACACACTCGGCCTCCCAGAAAGCAGCTG-----GCCCCCTGGCCAAGAGGCCAGTTTGCAGCAGCGTG-ATCATTCCACCATCTTTGCTGCCAtttgaatcttgaatcagctttgcgtacctgtaataaattccacttagccatggcatgtagttttttaaaaatacattgttgaatttgatttgctaatgttttgctgaagatttttgtatttatgttcttgaaagatgttgatctgaagtcttcctttcgtgtaatttctttatctggttttgatattagggtaatgctggactcacagaataagttaagaagtg-----------------ttctggaagagatgatagagaattagtatcatttcttccttaagtggtacag-tttaccagtgaaatcagctggacctgatgttttctgttttggaaggttattaattctggttaaattttgttaaagataacaggccta-tcagattgtctatttctctttgtgtgagttttggtagattgtgtccttcaagtaattggtcaatttcaattaagttattaaattttggacatagagttgttgatgctcttttta--ttttttcttttttcttctgtgtaattatggg------taatttctatgtcttcaagttcactcatctttttttctgcgatgtctcatctgctcttaatcttagacaatatatttttcctcttaaacattataaattttatctctagaagtttgatttgggtattttgtatatcttccatatctctacctaatgttgaatttatagagtataattttcataactgttttaatg---tc---ctttgatga------ttttttttttttt i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1693938 1165 + 3967317 CGAGTTCAGA--------A--TTTTTTTTTTTTTGAGATGCATATCAAGGCACCTAAAGTTCGAG-AAAAGATGTTCTTCCTGTGTTAAGGAAGCTGCACTGGGGTTACTTTAAAAAGATGTCAGAAGTCGCAGAGAagcggttctcaggcttttacggaacactgtcctg-ttgagaatctgctgatattatggaccttcttctttctacaaaaatgtgtaattgtgcataaaatttccaatagtttatagtcacctacttaagcccTTTGCTTTAGAGTAGATTATTACTCCCCGCTGTAAGGTAGGGAAGAAAAACATTCCATTCCTTTCCTCTGGTTGATATCTTTTTTTCTTCTCCTTGCACAGTCCAACAGACACACTCGGCCTCCCAGAAAGCAGCTG-----GTCCCCTGGCCAAGAGGCCAGTTTGCAGCAGCGTG-ATCATTCCACCATCTTTGCTGCCACttgaatcttgaatcagctttgcatacctgtaataaattccacttagccatggcatgtagttttttaaaaatacattgttgaatttgatttgctaatgttttgctgaagatttttgtatttatgttcttgaaagatgttgatctgaagtcttcctttcttgtaa----tttatctggttttgatattagggtaatgctggactcacagaataagttaagaagtg-----------------ttctggaagagatgatagagaattagtatcatttcttccttaagtggtacag-tttaccagtgaaatcagctggacctgatgttttctgttttggaaggttattaattctggttaaattttgttaaagat-acaggccta-tcagattatctatttctctttgtgtgagttttggtagattgtgtccttcaagtaattggtcaatttcaattaagttattaaattttggacatagagttgttgatgctcttt-----ttttttcttttttcttctgtgtaattatggg------taatttctatgtcttcaagttcactaatctttttttctgtgatgtctcatctgctcttaatcttagacaatatatttttcctcttaaacattataaattttatctctagaagtttgatttgggtattttgtatatcttccatatctctacctaatgttgaatttatagactataattttcataactgttttaatg---tc---ctttgatga------------ttttttt i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4570540 1188 + 163208435 CGAGTTCAGA--------ATTTTTTTTTTTTTTTGAGATGCATATCAAAGCACCTAAAGTTCAAA-AAAAAATGTTCTTCCTATGATAAGGAACCTGCACTGGGGTTAATTTAAAAAGATGTCAGAAGTCACAGAGAagtggttctcaagcttttacagaacgctgtcctgtttgagaatctgctgatattatggac---cttctttctacaaaaatgcataattgtgcgtaaaatttccaatagtttatagtcccctacttaagaccTTTGCTTTAGTGTAGATTATTACCGCCCTCTGTAAGGTAGGGAGGAAAAATATTCCATTCGTTTCCTCTGGTCGGTATCTTTTTT-CTTCTCCTTGCACAGTCCAACAGACACACTCGGCCTCCCAGAGACCAGTTG-----GCCCCCCGGCCAAGAGACCAGTTTGCAGCAGTGTG-ATCATTCCACTGTCTCTGCTGCCAtttgaatgttgaaccagctttgtgtacctggaataaattccacttagccatggcatgtagtttttaaaaaatacattgttgaatttgatttgctaatgttttgctgaagatttttatatttatgttcatgaaagatactgatctgaagtcttcctttcttctaatttctttatctggttttgatattagggtaatgctggactcacagaataagttaagaagtgttccctctgcttctattttctggaatagatgatagagaattagtatcatttcttccttaagtggtacag-tttaccagtgaaatcagctggacctgatgttttctgttttggaaggttattaattctggttaaattttgttaaagat-acaggccta-tcagattgtctatttctctttgtgtgagttttggtagattgtgtccttcaagtaattggtcaatttcaattaagttattaaattttggacatagagttgttgatactcttttt---tttttcttttttccttctgtgtaattatggg------taatttctatgtcttcaacttcactaatc-----ttctgcgatgtctcatctgctcttaatcttagataatatatttttcctcttaagcattatcgattttatctctagaagtttgatttgggtattttgtatgtcttccatatctctacctaatgtcgaatttatggagtataattttcataac--ttttaatgacctt---ctttgatga-------tttttttttttt i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5750940 1193 - 180051392 CGAGTTCAGA--------A------TTTTTTTTTGAGATGCATATCAAAGCACCTAAAGTTTGAG-AAAAAATGTTCTTCCTGTGATAAGGAACCTGCACTGGGGTTAATTTAAAAAGATGTCAGAAGTTGCAGAGAagtggttctcaagcttttacggaacactgtcctgtttgagaatctgctgatactatggaccttcttctttctacaaaaatgtataattgtgcataaaatttccagtagtttgtagtcccctacttaagaccTTTGCTTTAGTGTAGATTATTACTCCCCTCTGTAAGGTAGGGAGGAAAAATATTCCATTCCTTTCCTCTGGTCGATATCTTTTTT-CTTCTCCTTGCACAGTCCAACAGACACACTCGGCCTCCCAGAGACCAGCTGCACCCGCCCCC--ACCAAGAGACCAGTTTGCAGCAGTGGG-ATCATTCCACCATCTTTGCTGCCAtttgaatgttgaaccagcgttgcatacctggaataaattctatttatccatggcatgtagtttttaaaaaatacattgttgaatttgatttgctaatgttttgctgaggatttttgcatttatgttcatgaaagatactgatctgaagtcttcctttctggtaatttctttatctggttttgatattagggtaatgccggactcacagaa-----taagaagtgttccctctgcttctattttctggaagagagtatagagaattaatatcatttcttccttgagtggtacagttttaccagtgaaatcaactggacccggtgttttctgttttggaagtttattaattccggttcaattttgttaaagat-acaggtctattcagat----tgtttctctttgtgtgagttttggtagattgtgtccttcaagtaattggtcaatttcgattaagttattaaattttggacatagagttgttG---Ctctttttatttttttcttttttcctcctgtgtaattatggg------taatttctatgtcttcaagttcactaatcttttcttctgcgatgtttcatctgctcttaatcttagacaatatatttttcctcttaaacattatagattctgtctctagaagtttgatttgggtattttgtatatcttccatatctctacctaatgttgaatatttggagtataattttcataactattttaatg---tctgtctttgatga--ttttttttttttttttt i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5937396 1194 - 181584905 CGAGTTCAGA--------A------TTTTTTTTTGAGATGCATATCAAAGCACCTAAAGTTTGAG-AAAAAATGTTCTTCCTGTGATAAGGAACCTGCACTGGGGTTAATTTAAAAAGATGTCAGAAGTCACAGAGAagtggttctcaagcttttacggaacactgtcctgtttgagaatctgctgatactatggaccttcttctttctacaaaaatgtataattgtgcataaaatttccagtagtttgtagtcccctacttaagaccTTTGCTTTAGTGTAGATTATTACTCCCCTCTGTAAGGTAGGGAGGAAAAATATTCCATTCCTTTCCTCTGGTCGATATCTTTTTT-CTTCTCCTTGCACAGTCCAACAGACACACTCGGCCTCCCAGAGACCAGCTGCACCTGCCCCC--ACCAAGAGACCAGTTTGCAGCAGTGGG-ATCATTCCACCATCTTTGCTGCCAtttgaatgttgaaccagcgttgcatacctggaataaattctatttatccatggcatgtagtttttaaaaaatacattgttgaatttgatttgctaatgttttgctgaggatttttgcatttatgttcatgaaagatactgatctgaagtcttcctttctggtaatttctttatctggttttgatattagggtaatgccggactcacagaa-----taagaagtgttccctctgcttctattttctggaagagagtatagagaattaatatcatttcttccttgagtggtacagttttaccagtgaaatcaactggacccggtgttttctgttttggaagtttattaattccggttcaattttgttaaagat-acaggtctattcagat----tgtttctctttgtgtgagttttggtagattgtgtccttcaagtaattggtcaatttcgattaagttattaaattttggacatagagttgttG---Ctctttttatttttttcttttttcctcctgtgtaattatggg------taatttctatgtcttcaagttcactaatcttttcttctgcgatgtttcatctgctcttaatcttagacaatatatttttcctcttaaacattatagattctgtctctagaagtttgatttgggtattttgtatatcttccatatctctacctaatgttgaatatttggagtataattttcataactattttaatg---tctgtctttgatga-tttgtttttttttttttt i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 967804 1186 - 16193990 CGAGTTCAGA--------A------TTTTTTTTTGAGATGCATATCAAAGCATCTAAAGTTTGAG-AAAAAATGTTCTTCCTGTGATAAGGAACCTGCACTGGGGTTAATTTAAAAAGATGTCAGAAGTCGCAGAGAagtggttctcaagcttttacggaacactgtcctgtttgagaatctgctgatactatggaccttcttctttctacaaaaatgtataattgtgcataaaatttccagtagtttgtagtcccctacttaagaccTTTGCTTTAGTGTAGATTATTACTCCCCTCTGTAAGGTAGGGAGGAAAAATATTCCATTCCTTTCCTCTGGTCGGTATCTTTTTT-CTTCTCCTTGCACAGTCCAACAGACACACTCGGCCTCCCAGAGACCAGCTGCACCCGCCCCC--ACCAAGAGACCAGTTTGCAGCAGTGGG-ATCATTCCACCATCTTTGCTGCCAtttgaatgttgaaccagagttgcatacctggaataaattctatttatccatggcatgtagtttttaaaaaatacattgttgaatttgatttgctaatgttttgctgaggatttttgcatttatgttcatgaaagatactgatctgaagtcttcctttctggtaatttctttatctggttttgatattagggtaatgccggactcacagaa-----taagaagtgttccctctgcttctattttctggaagagagtatagagaattaatatcatttcttccttgagtggtacagttttaccagtgaaatcaactggacccggtgttttctgttttggaagtttattaattccggttcaattttgttaaagat-acaggtctattcagat----tgtttctctttgtgtgagttttggtagattgtgtccttcaagtaattggtcaatttcgattaagttattaaattttggacatagagttgtCG---Ctctttttatttttttcttttttcctcctgtgtaattatggg------taatttctatgtcttcaagttcactaatcttttcttctgcgatgtttcatctgctcttaatcttagacaatatatttttcctcttaaacattatagattctgtctctagaagtttgatttgggtattttgtatatcttccatatctctacctaatgttggatatttggagtataattttcgtaactattttaatg---tctgtctttgatga---------tttttttttt i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1788961 1195 - 21434487 CGAGTTCAGA--------A------TTTTTTTTTGAGATGCATATCAAAGCACCTAAAGTTTGAG-AAAAAATGTTCTTCCTGTGATAAGGAACCTGCACTGGGGTTAATTTAAAAAGATGTCAGAAGTCGCAGAGAagtggttctcaagcttttacagaacactgtcctgtttgagaatctgctgatattatggaccttcttctttctacaaaaatgtataattgtgcataaaatttccagtagtttgtagtcccctacttaagaccTTTGCTTTAGTGTAGATTATTACTCCCCTCTGTAAGGTAGGGAGGAAAAATATTCCATTCCTTTCCTCTGGTCGATATCTTTTTT-CTTCTCCTTGCACAGTCCAACAGACACACTCGGCCTCCCAGAGACCAGCTGCACCTGCCCCC--ACCAAGAGACCAGTTTGCAGCAGTGTG-ATCATTCCACCATCTTTGCTGCCAtttgaatgttgaaccagctttgcatacctggaataaattctattcatccatggcatgtagtttttaaaaaatacattgttgaatttgatttgctaatgttttgctgaggatttttgcatttatgttcatgaaggacactgatctgaagtcttcctttctggtaatttctttatctggttttgatattagggtaatgccggactcacagaa-----taagaagtgttccctctgcttctattttctggaagagagtgtagagaattagtatcatttcttctttgagtggcacagttttaccagtgaaatcaactggacctggtgttttctgttttggaagtttattaattccagttcaattttgttaaagat-acaggtctattcagat----tgtttctctttgtgtgagttttggtagattgtgtccttcaagtaattggtcaattttgattaagttattaaattttggacatagagttgttG---Ctctttttatttttttcttttttccttctgtgtaattatggg------taatttctgtgtcttcaagttcactagtcttttcttctgcgatgtctcatctgctcttaatcttagacaatatatttttcctcttaaacattatagattctctctctagaagtttgatttgggtattttgtatatcttccatatctctacctaatgttgaatatttggagtataattttcataactattttaatg---tctgtctttgatgattttttttttttttttttt i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4751487 1194 - 82825804 CGAGTTCAGA--------A------TTTTTTTTTGAGATGCATATCAAAGCACCTAAAGTTTGAG-AAAAAATGTTCTTCCTGTGATAAGGAACCTGCACTGGGGTTAATTTAAAAAGATGTCAGAAGTCGCAGAGAagtggttctcaagcttttacggaacactgtcctgtttgagaatctgctgatactatggaccttcttctttctacaaaaatgtgtaattgtgcataaaatttCCAGTAGTTTGTAGTTCCCTACTTGAGACCTTTGCTTTAGTGTAGATTATTACTCCCCTCTGTAAGGCAGGGAGGAAAAATATTCCATTCCTTTCCTCTGGTCGATATCTTTTTT-CTTCTCCTTGCACAGTCCAACAGACACTCTCTGCCTCCCAGAGACCAGCTGCACCCGCCCCC--ACCAAGAGACCAGTTTGCAGCGGTGTG-ATCATTCCACCATCTTTGCTGCCAtttgaatgttgaaccagctttgcgtacctggaataaattccatttatccatggcatgtagtttttaaaaaatacattgttgaatttgatttgctaatgttttgctgaggatttttgcatttatgttcatgaaagatactgatctgaagtcttcctttcttgtaatttctttatctggttttgatattagggtaatgccagactcacagaa-----taagaagtgttccctctgcttctgttttctggaagagagtatagagaattagtatcgtttcttccttgagtggtacagttttaccagtgaaatcaacccgacctggtgttttctgttttggaagtttattaattccggttcaattttgttaaagat-acaggtctattcagat----tgtttctctttgtgtgagttttgttagattgtgtccttcaagtaattggtcagtttcgattaagttattaaattttggacatagagttgttG---Ctctttttatttttttcttttttcctcctgtgtaattatggg------taatttctatgtcttcaagttcactaatcttttcttctgtgatgtctcatctgctctcaatcttagacaatatatttttcctcttaaacattatagattctatctctagaagtttgatttgggtattttgtatatcttccatatctctacctaatgttgaatatttggagtataattttcataactattttaatg---tctgtctttgatga-tttttttttttttttttt i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 257085 1193 + 2521317 CGAGTTCAGA--------A------TTTTTTTTTGAGATGCATATCAAAGCACCTAAAGTTTGAG-AAAAAATGTTCTTCCTGTGATAAGGAACCTGCACTGGGGTTAATTTAAAAAGATGTCAGAAGTCGCAGAGAagtggttctcaagcttttacggaacactgtcctgtttgagaatctgctgatattatggaccttcttctttctacaaaaatgtataattgtgcataaaatttccagtagtttgtagtcccctacttaagaccTTTGCTTTAGTGTAGATTATTACTCCCCTCTGTAAGGTAGGGAGGAAAAATATTCCATTCCTTTCCTCTGGTCGATATCTTTTTT-CTTCTCCTTGCACAGTCCAACAGACACACTCGGCCTCCCAGAGACCAGCTGCACCCGCCCCC--ACCAAGAGACCAGTTTGCAGCAGTGTG-ATCATTCCACCATCTTTGCTGCCAtttgaatgttgaaccagctttgcatacctggaataaattctatttatccatggcatgtagtttttaaaaaatacattgttggatttgatttgctaatgttttgctgaggatttttgcatttatgttcatgaaagatactgatctgaagtcttactttctggtaatttctttatctggttttgatattagggtaatgccggactcacagaa-----taagaagtgttccctctgcttctattttctggaagagagtgtagagaattagtatcatttcttccttgagtggtacagttttaccagtgaaatcaactggacccggtgttttctgttttggaagtttattaattccggttcaattttgttaaagat-acaggtctattcagat----tgtttctctttgtgtgagttttggtagattgtgtccttcaagtaattggtcaatttcgattaagttattaaattttggacatagagttgttG---Ctctttttatttttttcttttttccttctgtgtaattatggg------taatttctatgtcttcaagttcactagtcttttcttctgcgatgtctcatctgctcttaatcttagacaatatatttttcctcttaaacattatagattctctctctagaagtttgatttgggtattttgtatatcttccatatctctacctaatgttgaatatttggagtataattttcataactattttaatg---tctgtctttgatga--tcttttttttttttttt i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1738571 1193 - 2415367 TGAGTTCAGA--------A------TTTTTTTTTGACATGCATATCAAAGCACGTAAAATTTGAG-AAAAAATGTTCTTCCTGTAATAAGGAACCTGCACTGGGGTTAATTTAAAAAGATGTCAGAAGTCGCAGAGAagtggttctcaagcttttacggaacactgtcctgtttgagaatctgctgatattatggaccttcttctttctccaaaaatgtgtaattgtgcataaaatttccagtagtttgtagtcccctacttaagaccTTTGCTTTAGTGTAGATTATTACTCCCCTCTGTAAGGTAGGGAGGAAAAATATTCCATTCCTTTCCTCTGGTTGATATCTTTTTT-CTTCTCCTTGCACAGTCCAACAGACACACTCGGCCTCCCAGAGACCAGCTGCACCCACCCCC--ACCAAGAGACCAGTTTGCGGCAGTGTG-ATCATTGCACCATCTTTGCTGCCAtttgaatgttgaaccagctttgcgtacctggaataaattccatttatccatggcatgtagtttttaaaaaatacattgttggatttgatttgctaatgttttgctgaggatttttgcatttatgttcatgaaagatactgatctgaagtcttcctttcttgtaatttctttatctggttttgatattagggtaatgctggactcacagaa-----taagaagtgttccctctgcttctattttctggaagagattatagagaattagtatcatttcttccttaagtggtacagttttaccagtgaaatcaactggacctggtgttttctgttttggaagtttattaattccggttcaattttgttaaagat-acaggtctattcagattgtctgtttctctttgtgtgagttttggtagattgtgtccctcaagtaattggtcaatttcgattaagttattacattttggacatagagttgttG---Ctctttttatttttttcttttttccttctgtgtgattatggg------taatttctatgtcttcaagttcactagtcttttcttctgcgatgtctcatctgctcttaatcttagacaatatatttttcctcttaaacattatagattctatctctagaagtttgatttgggtattttgtatatcttccatatctctacctaatgttgaatatttggagtataattttcataactgttttaatg---tccgtctttgatga------ttttttttttttt i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64081292 1181 + 204313951 -------AGA--------T------TTTTTTGTTGAGATGCATATAAAAGCACCTAAATGTCGAG-AAAAAATGTTCTTCGTATGATAAGGAACCTGCACTGGGGTTAATTTAAAAAGATGTCAGAAGTTGCAGAGAaatggttctcaagcctttatagaacactgttgtgtttgagaatctgttgatatcatggaccttcttcttcctacaaaaatgtgtaattgtgcatgcaatttccagtagtttatactcccctacttaagaccTTTGCTTTAGTGTAGATTATTACTCTCCTTTGTAAAGGAGGGAGGAAAAATATTCCATTCCTCTCCTCTGGCCAATATCTTTTCT-CTTTTCCTTG--CAGTCCAGCAGTCACACTTGGCCTCCCACAGACCAGCT------GGCCCCTGGCCAAGAGGCCAGTTTGCAGCAGCATGCCTCATTCCACCATCTTTGCTGCTGtttgaatgtcaaaccagctttgcatacctggaataaattccacttggccatggcatttg-tttttaaaaaatacattgttgaatttgatttgctaatgttttgctgaggatttttgcatctgtgttcatgaaagatattgatctgaagacttcctttcttgtaatttatttatctgattttgatattagggtaatgctggactcatggaataagttaagaagtgtt-----cacttctattttctggaagagattatagagaattgctatcatttcttccttaagtggtacag-tttaccagtgaaatcaactggacatggtgttttctgttttggaaggttattaattctggttcaattttg-taagaat-acatgtctatttagattgtttgtttttctttgtatgagttttggtagattgtgtccatcaagtaattggtcgatttcaatgaagttattaaattttagtcatagagttgttgatgttctttttattttct--ttttttcttcctgtgtaattatgagtagttttaatttctatgtcttcaagcttactaatcttttcttctg-aatgtctcatctgctcttaatcttagacaatgtatttttcctcttacacattatagattttatctctagaagtttgacttgggtattttttatatcttccgtatctctacttaattttgaatttatagagtataattctcataactgttttaatg---tccttatttgctga------ttc---ttttttt i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2207982 1193 + 10068113 -------AGATTTTTTTTT------TTTTTTTTTGAGATGCATATAAAAGCACCTAAACGTCGAGAAAAAAATGTTCTTCCTATGATAAGGAACCTGCGCTGGGGTTAATTTAAAAAGATGTCAGAAGTCGCAGAGAATtggttctcaagcctttatggaacactgttgtgtttgagaatctgctgatactatggaccttcttcttcctacaaaaatgtgtaattgtccatgcaatttccagtagtttatactcccctactgaagaccTTTCCTTTAGTGTAGATTATTACTCTCCTCTGTAAGGGAGGGAGGAAAAATATTCCATTCCTTTCCTCTGACCAATATCTTTTCT-CTTTTCCTTG--TGGTCCAGCAGTCACACTTGGCCTCCCAGAGACCAGCTG-----GGCCCCTGGCCAAGAGGCCAGTTTGCAGCAGCATGCCTCATTCCACCATCTTTGCTGCTGtttgaatgtcaaaccggctttgcatacctggaataaattccacttggccatggcatttg-ttttaaaaaaatacattgttgaatttgatttgctattgttttgctgaggatttttgcatctgtgttcatgaaaggtattgatctgaagacctcctttcttgtaatttatttatctgattttgatattagggtaatgccggactcatggaataagtcaagaagtgttccctccacttctgttttctggaagagatgatagaggattgctgtcatttcttccttaagtggtaca--------agtgaaatcaactggacctggtgtcttctgttttggaaggttattaattctggctcaattttgttaaggat-acatgtctattcagattgtttgtttttctttgtgtgagttttggtagattgtgtccatcaagtaattggtcaatttcaattaagttattaaattttagacatagagttgttgatgctctttttattttcttcttttttcttcttgtgttattatgagtagttttaatttc--tgtcttcaagtttactaatattttcttctgcaatgtctcatctgctcttaatcttagacaatgtatttttcctcttacacattatagattttatctcta-aagtttgacttgggtattttttatttcttccatatgtctacttaattttgaatttatagagtataattctcataactgttttaatg---tccttatttgctaa------ttctttttttttt i saiBol1.JH378186 C 0 C 0 s aotNan1.NW_018501968v1 1163673 1191 - 2246441 -------AGA--------T------TTTTTTGTTGAGATGCATATAAAAGCACCTAAACGTTGAG-AAAAAATGTTCTTCCTATGATAAGGAAACTGCACTGGGGTTGATTTAAAAAGATCTCAGAAGTCACAGAGAaatggttctcaagcctttatggaacactgttgtgtttgagaatctgctgatattatggaccttcttcttcctacaaaaatgtgtaattgtgcatgcaatttccagtagtttatattcccctacttaagaccTTTGCTTTAATGTAGATTATTACTCTCCTCTGTAAGGGAGGGAGGAAAAATATTCCATTTCTTTCCTCTGGCCAATATGTTTTCT-CTTCTCCTTG--CAGTCTAACAGTCACACTTGGCCTCCCAGAGACCAGCTG-----GTCCCCTGGCCAAGAGGCCAGTTTGCAGCAGCATGCCTCATTCTACCATCTTTGCTGCTGtttgaatgtcagaccagctttgcatacctggaataaattccacttggccatggcatttgtttttaaaaaaaaaaattgttgaatttgatttgctaatgttttgctgagaatttttgcatctgtgttcatgaaagatattgatctgaagacttcctttcttgta----atttatctgattttgatattagggtaatgctggactcatggaataagttaagaagtgttccctccacttctattttctggaagagattatagagaattgctatcatttcttcctcaagtggtacag-tttatcagtgaaatcaactggacctggtgttttctgttttggaaggttattaattctggttcaattttgttatggat-acatgtctattcagattgtttgtttttctttgtgtgagttttgctagattgtgtccatcaagtaattggtcgatttcaattaagttattaaattttagacttagagttgctgatgctctttttattttcttcttttttcttcctgtgtaattatgagtagttttaatttctatgtctttaagtttactaatcttttcttctgcaatgtctcatctgctcttaattttagacaatgtatttttcctcttacacattatagattttatctctagaagtttgacttgggtattttttatatcttccatatctctatttaattttgaatttatagaatataattctcataactgttttaatg---tccttatttgctga------ttctttttttttt i aotNan1.NW_018501968v1 C 0 C 0 e cebCap1.NW_016107999v1 63131 1147 - 709587 M e mm10.chr13 65979384 6914 - 120421639 I e otoGar3.GL873522 1227194 7559 + 48283576 I e canFam3.chr4 37170079 847 + 88276631 I e proCoq1.NW_012152163v1 758448 6575 - 940639 I e dasNov3.JH562710 245691 6502 - 960158 I a score=11004479.000000 s hg38.chr5_KI270795v1_alt 52444 1142 + 131892 tttgaaatggagtcttgttctgttgcccaggctggagtgcagtggcacaatcttggctcactgca-cctttgcctcatgggttcaagccattctcctacctcagcctcatgagtacctgggattacaggtgcctgccatgacacctagcttatttctgtatttttagtagagatggg--------gttttgccatgttggccaggctggtctcaaactcttggcctcaaatgatccacctgccttagcctcccaaagtgctaggattacaggcataagccactgcacccagcctttctttgctcattcttacatctgtgtcagttcttggtcagtttgatttattgattattgtcctcattatagtttgtgtttttgccacctctatgcatgcttgataatccctgatgattgagtgccatatgtgaattttactttgtcaggtgtttaatatgtttgtatttttataaatatgtgctctggaatccaatttacttggaaatagtttgatctttctggggtcttgcttttattatttgttaggaaggtttagagcaatgcttagtctaggactaattattccacatgactaaagaaagacccttgtgagtactccacccaatgatccgtgaattgttcgattttaacgtctgcctggtgtcagtaagcactgttcttagccctgt----gtgagtgcgagatactattgctttgaatcctttcagatgttt----gtttgt----------------------ttgtttttttccacagcctcaggtttcttttatattttgttt------gttttagagatgagttctcactgtgttgcccaggctggagtgcagtggctattcataggcatgatc-----------------------------------atcacacactacggtcttgaactcctgggctcaagcgatcctcccacctcagcctcctgagtagctgggactgtaggcgtgtgcccaccatgcctggcctagcctcaggtatttttattgcatacatgagttgaccagtactctgccgtttccatgagggagacccactgcagatttctggtgctctctctctgggcagttaccttttctctgcaatctgctctagaaactctgcttttgtctccctTCCTGGAGTGGAAAATCTTAAGACAAAAAGG----AGATCATAGGTAGATATCAAGAAGAATCTAGT s panTro5.chr5 5300980 1143 - 181907262 tttgaaatggagtcttgttctgttgcccaggctggagtgcagtggcacaatcttggctcactgcagcctttgcctcatgggttcaagccattctcctacctcagcctcatgagtacctgggattacaggtgcctgccatgacacctagcttatttctgtatttttagtagagatggg--------gttttgccatgttggccaggctggtctcaaactcttggcctcaaatgatccacctgccttagcctcccaaagtgctgggattacaggcataagccactgcacccagcctttctttgctcattcttacatctgtgtcagttcttggtcagtttgatttattgattattgtcctcattatagtttgtgtttttgccacctctatgcatgcttgataatccctgatgattgagtgccatatgtgaattttactttgtcaggtgtttaatatgtttgtatttttataaatatttgctctggaatgcaatttacttggaaatagtttgatctttctggggtcttgcttttattatttgttaggaaggtttagagcaatgcttagtctaggactaattattccacatgactaaagaaagacccttgtgagtactccacccaatgatccgtgaattgttcgattttaacgtctgcctggtgtcagtaagcactgttcttagccctgt----gtgagtgcgagatactattgctttgaatcctttcagatgttt----gtttgt----------------------ttgtttgtttccacagcctcaggtttcttttatattttgttt------gttttagagatgagttctcactgtgttgcccaggctggagtgcagtggctattcataggcatgatc-----------------------------------atcacacactacagtcttgaactcctgggctcaagcgatcctcccacctcagcctcctgagtagctgggactgtaggcgtgtgcccaccatgcctggcctagcctcaggtatttttattgcatacatgagttgaccagtactctgccgtttccatgagggagacccactgcagatttctggtgctctctctctgggcagttaccttttctctgcaatctgctctagaaactctgcttttgtctccctTCCTGGAGTGGAAAATCTTAAGACAAAAAGG----AGATCGTAGGTAGATATCAAGAAGAATCTAGT i panTro5.chr5 C 0 C 0 s panPan2.chr5 5563597 1143 - 183735486 tttgaaatggagtcttgttctgttgcccaggctggagtgcagtggcacaatcttggctcactgcagcctttgcctcatgggttcaagccattctcctacctcagcctcatgagtacctgggattacaggtgcctgccatgacacctagcttatttctgtatttttagtagagatggg--------gttttgccatgttggccaggctggtctcaaactcttggcctcaaatgatccacctgccttagcctcccaaagtgctgggattacaggcataagccactgcacccagcctttctttgctcattcttacatctatgtcagttcttggtcagtttgatttattgattattgtcctcattatagtttgtgtttttgccacctctatgcatgcttgataatccctgatgattgagtgccatatgtgaattttactttgtcaggtgtttaatatgtttgtatttttataaatatttgctctggaatgcaatttacttggaaatagtttgatctttctggggtcttgcttttattatttgttaggaaggtttagagcaatgcttagtctaggactaattattccacatgactaaagaaagacccttgtgagtactccacccaatgatccgtgaattgttcgattttaacgtctgcctggtgtcagtaagcactgttcttagccctgt----gtgagtgcgagatactattgctttgaatcctttcagatgttt----gtttgt----------------------ttgtttgtttccacagcctcaggtttcttttatattttgttt------gttttagagatgagttctcactgtgttgcccaggctggagtgcagtggctattcataggcatgatc-----------------------------------atcacacactacagtcttgaactcctgggctcaagcgatcctcccacctcagcctcctgagtagctgggactgtaggcgtgtgcccaccatgcctggcctagcctcaggtatttttattgcatacatgagttgaccagtactctgccgtttccatgagggagacccactgcagatttctggtgctctctctctgggcagttaccttttctctgcaatctgctctagaaactctgcttttgtctccctTCCTGGAGTGGAAAATCTTAAGACAAAAAGG----AGATCGTAGGTAGATATCAAGAAGAATCTAGT i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1695103 1142 + 3967317 tttgaaatggagtcttgttctgttgcccaggctggagtgcagtggcacaatcttggctcactggagcctttgcctcatgggttcaagccattctcctacctcagcctcatgagtacctgggattacaggtgcctgccatgacacctagcttatttctgtatttttagtagagatggg--------gttttgccatgttggccaggctggtctcaaactcttggcctcaaatgatctacctgccttagcctcccaaagtgctgggattataggcataagccactgcacccagcctttctttgctcattcttacatctgtgtcagttcttggtcagtttgatttattgattattgtcctcattatagtttgtgtttttgccacctctatgcatgcttgataatccctgatgattgagtgccatatgtgaattttactttgtcaggtgtttaatatgtttgtatttttataaatatttgctctggaatgcaatttacttggaaatagtttgatctttctggggtcttgcttttattatttgttaggaaggtttagagcaatgcttagtctaggactaattattccacatgactaaagaaagacccttgtgagtgctccacccaatgatccgtgaattgttcgattttaccgtctgcctggtgtcaataagcactgttcttagccctgt----gtgagtgcgagatactattgctttgaatcctttcagatgttt----gtttgt----------------------ttgtttttttccacagcctcaggtttcttttatattttgttt------g-tttagagatgagttctcactgcgttgcccaggctggagtgcagtggctattcacaggcatgatc-----------------------------------atcacacactacagtcttgaactcctgggctcaagcgatcctcccacctcagcctcctgagtagctgggactataggcatgtgcccaccatgcctggcctagcctcaggtatttttattgcatacatgagttgaccagtactctgccgtttccatgaaggagacccactgcagatttctggtgctctctctctgggcagttaccttttctctgcaatctgctctagaaactctgcttttgtctccttTCCTGGAGTGGAAAATCTTAAGACAAAAAGG----AGATCGTAGGTAGATATCAAGAAGAATCTAGT i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4571728 1145 + 163208435 tttgaaatggagtcttgttctgttgcccaggctggagtacagtggcatgatcttggctcactgcaaac-ttgccttacggattcaaaccattctcctacctcagcctcctgagtacctgggattacaggtgcctgccacgacgcctagcttatttccgtatttttagtagagatggg--------gttttgccatgttggccaggctggtctcaaactcttagcctcaagtgatccacccgccttagcctcccaaagtgctgggattataggcataagccactgcacccaggctttctttgctaattcttacatctatgtcagttcttggtcagtttgatttattgattattgtcctcattatagtttgtgtttttaccacctctatgcatggttgataatccctgatgattgaatgccatatgtgaattttactttgtcaggtgtttaatatgtttgtatttttataaatatttgctctggaatgcaatttacttggaaatagtttgatctttctggggtcttgcttttattattcgttaggaaggtttagagcaatgcttagtctaggactaattattcc-catgactaaagaaagacccttgtgagtgctccacccaatgatccgtgaattgttcaattttaccgtctgtctggtgtcaataagcactgttcttagccctgtgtgagtgagtgcgagatactattgctttgaatcctttcagatgttt----gtttgt----------------------ttgtttttttccacagcctcaggtttcttttacatttttttt------gttttagagatgagttctcactgtgttgcccaggctggagtgcagtggctattcacaggcatgatc-----------------------------------atcacacactacggtcttgaactcctgggctcaagtgatcctcccacctcagcctcccgagtagctgggactgtaggcgtgtgcccaccatacctggcctggcctcaggtatttttattgcatgcatgagttgaccagtactctgccgtttccatgagggagacccactgcagatttctggtgctctctctctgggcagttaccttttctctgcaatctgctctagaaactctgcttttgtctctctTCCTGGAGTGGAAAATCTTAAGACAAAAAGG----AGATCGTAGGTAGATATCAAGAAGAACCTAGT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5752133 1143 - 180051392 ttggaaatggagccttgttctattgcccaggctggagtgcagtagcacgatcttggctcactgcaacctttgcctcatgggttcaagccattctcctacctcagcctcctgagtacctgagattacaggtgcctgccacgatgcctagcttatatttatatttttagtagagatggg--------gtttcaccatgttgaccaggctggtctcaaactcttggcctcatgtgatccacccgccttagcctcccaaagtgctgggattataggtataagccactgcacctagcctttctttgctaattcttacatctatgtcagttcttggtcagtttgatttattaattattgtcctcattatagtttgtgtttttaccacctctatgcatgcttgataatccctgatgattgaatgccatatgtgaattttactttgtcaggtgtttaatatatttgtatttttataaatatttgctctggaatgcaatttacttggaaatagtttgatctttctggggtcttgcttttattatttgtttggaatgtttagagcaatgcttagtctaggactaacgattccacatgactaaagaaagacccttgtgagtgctccatccagtgctccatgaattgttcgattttactgtctatctggtgtcagtaagcactgttcttagccctgt----gtgagtgccggataatattgctttgaatcctttcagatgttt----tttttt----------------------tttcttctccccacagcctcaggtttcttttctattttgttt------gttttagagatgggttctcactgtgttgcccaggctatagtgcagtggctattcacaggcatgatc-----------------------------------attacacactacagtcttgaactcctgggctcaagcaatcctcccacctcagcctcccaagtagctgggactgtaggcatgtgcccaccatgcctggcctagcctcgggtatttttattgcatacatgagtcgaccagtactctgccgtttccatgagcgagacccactgcagatttctggtgctctctctctgggcagttaccttttctctgcaatctgctctagaaactctgcttttgtctccctTTCTGGAGTGGAAAATCTTAAGACAAAAAGG----AGATTGTAGGTAGATATCAGGAAGAACCTAGT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5938590 1143 - 181584905 ttggaaatggagccttgttctattgcccaggctggagtgcagtagcacgatcttggctcactgcaacctttgcctcacgggttcaagccattctcctacctcagcctcctgagtacctgagattacaggtgcctgccacgatgcctagcttatatttatatttttagtagagatggg--------gtttcaccatgttgaccaggctggtctcaaactcttggcctcatgtgatccacccgccttagcctcccaaagtgctgggattataggtgtaagccactgcacctagcctttctttgctaattcttacatctatgtcagttcttggtcagtttgatttattaattattgtcctcattatagtttgtgtttttaccacctctatgcatgcttgataatccctgatgattgaatgccatatgtgaattttactttgtcaggtgtttaatatatttgtatttttataaatatttgctctggaatgcaatttacttggaaatagtttgatctttctggggtcttgcttttattatttgtttggaatgtttagagcaatgcttagtctaggactaacgattccacatgactaaagaaagacccttgtgagtgctccatccagtgctccatgaattgttcgattttactgtctatctggtgtcagtaagcactgttcttagccctgt----gtgagtgccagataatattgctttgaatcctttcagatgttt----tttttt----------------------tttcttctccccacagcctcaggtttcttttctattttgttt------gttttagagatgggttctcactgtgttgcccaggctatagtgcagtggctattcacaggcatgatc-----------------------------------attacacactacagtcttgaactcctgggctcaagcaatcctcccacctcagcctcccgagtagctgggactgtaggcatgtgcccaccatgcctggcctagcctcgggtatttttattgcatacatgagtcgaccagtactctgccgtttccatgagcgagacccactgcagatttctggtgctctctctctgggcagttaccttttctctgcaatctgctctagaaactctgcttttgtctccctTCCTGGAGTGGAAAATCTTAAGACAAAAAGG----AGATTGTAGGTAGATATCAGGAAGAACCTAGT i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 968990 1142 - 16193990 ttggaaatggagccttgttctattgcccaggctggagtgcagtagcacgatcttggctcactgcaacctttgcctcacgggttcaagccattctcctacctcagcctcctgagtacctgagattacaggtgcctgccacgatgcctagcttatatttatatttttagtagagatggg--------atttcaccatgttgaccaggctggtctcaaactcttggcctcatgtgatccacccgccttagcctcccaaagtgctgggattataggtataagccactgcacctagcctttctttgctaattcttacatctatgtcagttcttggtcagtttgatttattaattattgtcctcattatagcttgtgtttttaccacctctatgcatgcttgataatccctgatgattgaatgccatatgtgaattttactttgtcaggtgtttaatatatttgtatttttataaatatttgctctggaatgcaatttacttggaaatagtttgatctttctggggtcttgcttttattatttgtttggaatgtttagagcaatgcttagtctaggactaacaattccacatgactaaagaaagacccttgtgagtgctccatccagtgctccatgaattgttcgattttactgtctatctggtgtcagtaagcactgttcttagccctgt----gtgagtgccagataatattgctttgaatcctttcagatg-tt----tttttt----------------------tttcttctccccacagcctcaggtttcttttctattttgttt------gttttagagatgggttctcactgtgttgcccaggctatagtgcagtggctattcacaggcatgatc-----------------------------------attacacactacagtcttgaactcctgggctcaagcaatcctcccacctcagcctcccgagtagctgggactgtaggcatgtgcccaccatgcctggcctagcctcgggtatttttattgcatacatgagtcgaccagtactctgccgtttccatgagcgagacccactgcagatttctggtgctctctctctgggcagttaccttttctgtgcaatctgctctagaaactctgcttttgtctccctTCCTGGAGTGGAAAATCTTAAGACAAAAAGG----AGATTGTAGGTAGATATCAGGAAGAACCTAGT i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1790156 1142 - 21434487 ttggaaatggagtcttgttctattgcccaggctggagtgcagtagcacggtcttggctcactgcaacctttgcctcacgggttcaagccattctcctacctcagcctcctgagtacctgagattacaggtgcctgccacgatgcctagcttatttttatatttttagtagagatagg--------gtttcaccatgttgaccaggctggtctcaaactcttggcctcatgtgatccacccgcgttagcctcccaaagtgctgggattataggtataagccactgcacctagcctttctttgctaattcttacatctatgtcagttcttggtcagtttgatttattaattattgtcctcattatagtttgtgtttttaccacctctatgtatgcttgataatccctgatgattgaatgccatatgtgaattttactttgtcaggtgtttaatatatttgtatttttataaatatttgctcgggaatgcaatttacttggaaatagtttgatctttctggggtcttgcttttattatttgtttggaatgtttagagcaatgcttagtctaggactaacaattccacatgactaaagaaagacccttgtgagtgctccatccagtgctccatgaattgttcgattttactgtctatctggtgtcagtaagcactgttcttagccctgt----gtgagtgccagataatattgctttgaatcctttcagatg-tt----tttttt----------------------ttttttctccccacagcctcaggtttcttttctattttgttt------gttttagatatgggttctcactgtgttgcccaggctgtagtgcagtggctattcacaggcatgatc-----------------------------------attacacactacagtcttgaactcctgggctcaagtgatcctcccacctcagcctcccgagtagctgggactgtaggcatgtgcccaccatgcctggcctagcctcgggtatttttattgcatacatgagtcgaccagtactctgccgtttccatgagcgagacccactgcagatttctggtgctctctctctgggcagttaccttttctctgcaatctgctctagaaactctgcttttgtctccctTCCTGGAGTGGAAAATCTTAAGACAAAAAGG----AGATTGTAGGTAGATATCAGGAGGAACCTAGT i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4752681 1164 - 82825804 ttggaaatggagtcttgttctattgcccaggctggagtgcagtagcacgatcttggctcactgcaacctttgcctcacaggttcaagccattctcctacctcagcctcctgagtacctgagattacaggtgcctgccacgatgcctagcttatttttatatttttagtagagatgga--------gtttcaccatgttgaccaggctggtctcaaactcttggcctcaagtgatccacccgccttagcctcccaaagtgctgggattataggtataagccactgcacctagcctttctttgccaattcttacatctatgtcagttcttggtcagtttgatttattaattattgtcctctttatagtttgtgtttttaccacctctgtgcatgcttgataatccctgatgattgaatgccatatgtgaattttactttgtcagatgtttaatatatttgtatttttataaatatttgctctggaatgcaatttacttggaaatagtttgatctttctggggtcttgcttttattatttgtttggaatgtttagagcaatgcttagtctaggactaacgattccacatgactaaagaaagacccttgtgagtgctccatccagtgctccatgaattgttcgattttactgtctatctggtgtcagtaagcactgttcttagccctgt----gtgagtgccagataatattgctttgaatcctttcagatg-tt----ttttttgtttgttttttTTGTTTGTTTGTTTTTTCTCCCCACAGCCTCAGGtttcttttctattttgttt------gttttagagatgggttctcactgtgttgcccaggctgtagtgcagtggctattcacaggcatgatc-----------------------------------attacacactacagtcttgaactcctgggctcaagcgatcctcccacctcagcctcccgagtagctgggactgtaggcgtgtgcccaccatgcctggcctaggctcgggtatttttattgcatacatgagtcgaccagtactctgccgtttccatgagcgagacccactgcagatttctggtgctctctctctgggcagttaccttttctctgcaatctgctctagaaactctgcttttatctccctTCCTGGAGTGGAGAATCTTAAGACAAAAAGG----AGATTGTAGGTAGATAGCAGGAAGAACCTAGT i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 258278 1142 + 2521317 ttggaaatggagtcttgttctattgcccaggctggagtgcagtagcacgatcttggctcactgcaacctttgcctcacgggttcaagccattctcctacctcagcctcctgagtacctgagattacaggtgcctgccacgatgcctagcttatttttatatttttagtagagatggg--------gtttcaccatgttgaccaggctggtctcaaactcttggcctcatgtgatccacccgccttagcctcccaaagtgctgggattataggtataagccactgcacctagcctttctttgctaattcttacatctatgtcagttcttggtcagtttgatttattaattattgtcctcattatagtttgtgtttttaccacctctatgcatgcttgataatccctgatgattgaatgccatatgtgaattttactttgtcaggtgtttaatatatttgtatttttataaatatttgctctggaatgcaatttacttggaaatagtttgatctttctggggtcttgcttttattatttgtttggaatgtttagagcaatgcttagtctaggactaacgattccacatgactaaagaaagacccttgtgagtgctccatccagtgctccatgaattgttcgattttactgtctatctggtgtcagtaagcactgttcttagccctgt----gtgagtgccagataatattgctttgaatcctttcagatg-tt----tttttt----------------------ttttttctccccacagcctcaggtttcttttctattttgttt------gttttagagatgggttctcactgtgttgcccaggctgtagtgcagtggctattcacaggcatgatc-----------------------------------attacacactacagtcttgaactcctgggctcaagcgatcctcccacctcagcctcccgagtagctgggactgtaggcatgtgcccaccatgcctggcctagcctcgggtatttttattgcatacatgagtcgaccagtactctgccgtttccatgagcgagacccactgcagatttctggtgctctctctctgggcagttaccttttctctgcaatctgctctagaaactctgcttttgtctccctTCTTGGAGTGGAAAATCTTAAGACAAAAAGG----AGATTGTAGGTAGATATCAGGAGGAACCTAGT i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1739764 1110 - 2415367 tttgaaatggagtcttattctattgcccaggctggagtgcagtagcacgatcttggctcactgcaacctttgcctcacgggttcaagccattctcctacctcagcctcctgagtacctgagattacaggtgcctgccatgacacctagcttatttttgtatttttagtagagatggg--------gtttcaccatgttgaccaggctggtctcaaactcttggcttcaagtgatccacccgccttagcctcccgaagtgctgggattataggtataagccatggcacctagccttgctttgctaattcttacatctatgtcagttcttggtcagtttgatttatgaattattgtcctcattatagtttgtgtttttaccacctctgtgtatgcttgataatccctgatgaatgaatgccatatgtgaattttactttgtcaggtgtttaatatatttttatttttataaatatttgctctggaatgcaatttacttagaaatagtttgatctttctggggtcttgcttttattatttgttaggaaggtttagagcaatgcttagtctaatactaatgattccacatgactaaagaaagacccttgtgagtgctccatccagtgctccacgaattgttcaatt------tctatctggtgccagtaagcactgttcttagccctgt----gtgagtgccagataatattgctttgaatcctttCAGATG--------ATTTA----------------------TTTTTTTTCCCCACAGCCTCAGGtttcttttctattttgttt------gttttagagatgggttctcactgtgttgcccaggctgtagtgcagtggctattcacaggcatgatc-----------------------------------attacacactacagtcttgaactcctgggctcaagcgatcctcccac-----------------------ctGTAGGCACATGCCCACCATGCCTGGcctagcctcaggtatttttattgcatacatgaatcgaccagtactctgccatttccatgagcgagacccactgcagatttctggtgctctctctctggacagttatcttttctctgcaatctgctctagaaactctgcttttgtctccctTCCTGGAGTGGAAAATCTTAAGACAAAAAGG----AGATTGTAGGTAGATACCAGGAAGAACCTAGT i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64082473 1138 + 204313951 tttgagatggagtcttgctctgttgcccaggctagagttcagtggtaccatcttggcttactgcaacctttgcctcccgggttcaagtgattctcctgcctcagcttcctgagtccctgggataacaggtgcctgccatgacgcttgaat----tttgtatttttagtagacttttgtatttttagcttcg-catgttggccaggctggtctcaaactcttggcctcaagtgatccacacacctcggcctcccaaagtgctgggattgtaggcatgagctgctgtgcccagcctttctttgctaattcttacatctatatcagttcttggtcagtttgatttattgattactgacctcattatgatttgtgtttttgccacctctgtgcatgtttgatattccctgat---tgaatgccatttgtgaattttactttgtcagatgttgaatatgtttgtgtttttatgaatatttgctctggaatgcaatttacttggaaatagtttgatctttctggggtcttgcttttattatttgttaggaaggtttaaagcaatgcttagtctaggtctaattattccacatgactaaggaaagacccttgtgagtgctccacccagtgctccatgaatttgttggtttta----ctgtctggtgtcaataagcactgttcttagccctgt----gtgagtgacaggtactattgctttgactcctttcaga---------tttttt----------------------tttcctttccccacagcctcaggtTTCttttatattttgttttgttttgttttagagataagctctcactgtattgcccaggctggagtgcagtggctattcacaggcatgggc-----------------------------------atcacaca--ataatctgaaactcctgggctcaagcgatcttcccacctcagcctcctgagtagctgggactgtaggtgtgtg-ccagcatgcctagcctagcttcaggtatttttcttgcatacatgagtggacgagtactcttctatttccttgagggagacccactgcagatttctggtgtcctttctctgggcagttatcttttctccacaacctggtctagaaactctgctttggtctctctTCCTAGAGTAGAAAATCTTAAGACAAAAAGGAGTTAGTTTGTAGGCATATTTC---AAGAACCTATT i calJac3.chr2 C 0 I 223 s saiBol1.JH378186 2209175 1167 + 10068113 tttgagatggagtcttgctctgttgcccaggctagagttcagtggtacgatcttggctcactgcaaccttcgcctcctgggttcaagtgattctcctgcctcagcttcctgagtccctgggattacagatgcctgccatggcgcttgact----tttgtatttttaatagaggtggg--------gcttca-catgttggccaggctggtctcaaactcttggcctcaagtgatccacatgcctcggcctcccaaagtgctgggattgcaggcatgagctactgggcccagcctttctttgctaattcttacatctatatcagttcttggtcagtttgatttattgattactgacctcattatggtttgtgtttttaccacctctgtgcatgtttgataatccctgat---tgaatgccatttgtgaattttactttgtcagatgttgaatatgtttgtatttttatgaatatttgctctggaatgcaatttacttggaaatagtttgatctttctggggtcttgcttttattatttgttaggaaggtttagagcaatgctgagtctaggactaattactccacatgactaaggaaagatccttgtgagtactccacccaatgctccatgaatttgtcggtctta----ctgtctggtgtcaataagcactg---ttagccctgt----gtgagtggcagatactatcgctttgactcctttcagatgtttcttttttttt----------------------ttttctttccccacagcctcaggTTTCTTTTACgttttgttttgttttgttttagagatgacctctcgctgcgttgcccaggctggagtgcagtggctattcacaggcatgaGCAATAATCTGAAATTATTCTTCTTCTTCTCAATATTATTTcaca--ataatctgaaactcttgggctcaagcgatcttcccacctcagcctcctgagtagctgggactgtaggtgtgtg-ccagcatgcATAGcctagcctcaggtatttttattgcatacatgagtggacgagtactcttccatttccttgagggaggcccactgcagatttctggtgccctttctctgggcagttatcttttcttcacaacctggtctagaaactctgctttggcctccctTCCTGGGGTAGAAAATCTTAAGACAAAAAGG----AGTTTGTAGGCAGATATC---AAGAACCTATT i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 64302 1123 - 709587 tttgaaatggagtcttgctctgtttcccaggctagagttcagtggtacaatcttggctccctgcaacctttgcctcccgggttcaagtgattctcctgcctcagcttcctgagcccctgggattataggtgcctgccatgacacttgact----tttgtatttttagtagaggtggg--------gcttca-catgttggccaggctggtctcaaactcttggcctcaagtgatccacacgcctcggcctcccaaagtgctgggattgtaggcatgagccactgcgcccagGCTTTCTTTGctaattcttacatctatatcagttcttggtcagtttgatttattgattactgacctgattatggtttgtgtttttaccacctctgtgcatgtttgataatccctgat---tgaatgccatttgtgaattttactttgtcagatgttgaatatgtttgtatttttatgaatatttgctctggaatgcaatttacttggaaatagtttgatctttctggggtcttgcttttattatttgttaggaagggttagagcaatgcttaatctaggactaattattccacatgactaaggaaagacccttgtgagtgctccacccaatgctccatgaatttgtcggtttta----ctgtctagtgtcaataagcactgttcttagtcccgt----gtgagtgacagatactattgctttgactcctttcagatgt------cttttt----------------------ttttctttccccacagccttagg-TTCttttatattttgttttgtttcgttttagagatgagctctcact-cgttgcccaggcttgagtgcagtggctattcacaggcatgagc-----------------------------------atcacaca--ataatctgaaactcctgggctcaagcgatcttcccacctcagcctcctgagtagctgggactgcaggtgtgtg-ccagcatgcctagcctagcctcaggtattcttcttgcatacatgagtggatgagtactcttccatttccttgagggagacccactgcagatttctggtgtcctttctctgggcagttatcttttctctacaacctggtctagaaactctgctttggtctc----cctggaGTAGAAAATCTTAAGACAAAAAGG----AGTTTGTAGGCAGATATC---AAGAACCTATT i cebCap1.NW_016107999v1 M 1147 C 0 s aotNan1.NW_018501968v1 1164864 1126 - 2246441 tttgagatggagtcttgctttgttgcccaggctagagttcagtggtacgatcttggctcactgcaacctttgcctcctgggttcaagtgattctcctgcttcagcttcctgagtccctgggattacaggtgcctgccatgacgcttgact----tttgtatttttaatagaggttgg--------gcttca-cgtgttggccagactagtctcaaactcttggcctcaagtgatccacacacctcggcctcccaaagtgctgggattgtaggcatgagccactgcgcccagactttctttactaattcttacatctgtatcaggtcttggtcagtttgatttattgattactgacttcattatggtttgtgtttttaccacctctgtgcatgtttgataatccctgac---tgaatgccatttgtgaattttactttgtcagatgttgaatatgtttgtatttttatgaatatttgctctggaatgcaatttacttggaaatagtttgatctttctggggtcttgcttttattatttgttaggaaagtttagagcaatgattagtctaggactaattatcccacatgactaaggaaagacccttgtgagtgctccacccaatgctccatgaatttgttggtttta----ctgtctggtgtcaataagcactgttcttagccctgt----gtgagtgacagatactattgctttgactcctttcaga---------tgtttt----------------------ttttctttccccacagcctcaggtttctttgatattttgttttgttttgttttagagatgaggtctcactgtgttgcccaggctggagtgcagtggctgttcacaggcacgggc-----------------------------------atcacaca--ataatctgaaactcctgggctcaagcgatcttcccacctcagcctcctgagtagctggaactgtaggtgtgtg-caagcatgcctagcctagcctcaggtatttttcttgcatacatgagtggacgagtattcttccatttccttgagggagacccactgcagatttctggtgccctttctctgggcagttatcttttctccacaacctggtctagaaactctgctttggtctctctTCCTGGAGTAGAAAATCTCAAGACAAAAAGG----AGTTTGTAGGCAGATATC---AAGAACCTATT i aotNan1.NW_018501968v1 C 0 C 0 e mm10.chr13 65979384 6914 - 120421639 I e otoGar3.GL873522 1227194 7559 + 48283576 I e canFam3.chr4 37170079 847 + 88276631 I e proCoq1.NW_012152163v1 758448 6575 - 940639 I e dasNov3.JH562710 245691 6502 - 960158 I a score=3806339.000000 s hg38.chr5_KI270795v1_alt 53586 382 + 131892 AGAAGAAATTTCTTACTCTCATATGCATCCACAGGCCAATGGAGATATTCAGCCCCAGAAAGTAAAAAGAAGCTTGCTTTCCAAATGATTCATCAGTTAGTGTTTTCTTTCAATGAATGGAAGATTTTAACACAAACAAGAGTTTGTAGGCAGACATTGAGAAGAagctctatctcctcaatgtagggagtctgctgggatctgcctcagttcgcctgccctgggttatggttgggaaactctgttaatacggtgattggggaaaattacagggtttgtcttattttgcatctctcagagatcactgtcctttgttgttgtctggtgtccagtgtcttgaaaactgctatttcattattt----tatttatatataaatatatgta s panTro5.chr5 5302123 382 - 181907262 AGAAGAAATTTCTTACTCTCATATGCATCCACAGGCCAATGGAGATATTTAGCCCCAGAAAGTAAAAAGAAGCTTGCTTTCCAAATGATTCATCAGTTAGTGTTTTCTTTCAATGAATGGAAGATTTTAACACAAACAAGAGTTTGTAGGCAGACATTGAGAAGAagctctatctcctcaatgtagggagtctgctgggatctgcctcagttcgcctgccctgggttatggttgggaaactctgttaatacggtgattggggaaaattacagggtttgtcttattttgcatctctcagagatcactgtcctttgttgttgtctggtgtccagtgtcttgaaaactgctatttcattattt----tatttatatataaatatatgta i panTro5.chr5 C 0 C 0 s panPan2.chr5 5564740 382 - 183735486 AGAAGAAATTTCTTACTCTCATATGCATCCACAGGCCAATGGAGATATTTAGCCCCAGAAAGTAAAAAGAAGCTTGCTTTCCAAATGATTCATCAGTTAGTGTTTTCTTTCAATGAATGGAAGATTTTAACACAAACAAGAGTTTGTAGGCAGACATTGAGAAGAagctctatctcctcaatgtagggagtctgctgggatctgcctcagttcgcctgccctgggttatggttgggaaactctgttaatacggtgattggggaaaattacagggtttgtcttattttgcatctctcagagatcactgtcctttgttgttgtctggtgtccagtgtcttgaaaactgctatttcattattt----tatttatatataaatatatgta i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1696245 382 + 3967317 AGAAGAAATTTCTTACTCTCATATGCATCCACAGGCCAATGGAGATATTCAGCCCCAGAAAGTAAAAAGAAGCTTGCTTTCCAAATGATTCATCAGTTAGTGTTTTCTTTCAATGAATGGAAGATTTTAACACAAACAAGAGTTTGTAGGCAGACACTGAGAAGAagctctatctcctcaatgtagggagtctgctgggatctgcctcagttcgcctgccctgggttatggttgggaatctctgttaatacggtgattggggaaaattacagggtttatcttattttgcatctctcagagatcactgtcctttgttgttgtctggtgtccagtgtcttgaaaactgctatttcattattt----tatttatatataaatatatgta i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4572873 380 + 163208435 AGAAGAAATGTCTTACTCTCATATGCATCCACAAGCCAATGGAGATATTCAGCCCTGGAAAGTAAAAAGAAGCTTGCTTTCCGAATGATTCATCAGTTACTGTTTTCTTTCAATGAATGGAAGATTTTAACACAAAC--GAGTTTGTAGGCAGACATTGAAAAGAagctctatctcctcaatttagggagtctgctgggatctgcctcagttcgcctgccctgggttatggttgggaatctctgttaatacggtgattggggaaaattacagggtttgtcttattttgcatctctcagagatcactgtcctttgttgttgtctggtgtccaatgtcttgaaaactgctatttcattattt----tatttatatataaatatatgta i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5753276 382 - 180051392 AGAAGAAATTTCTTACTCTCATAGGCATCTGTAGGCCAATGGAGATATTCAGCCCTGAAAAGTAAAAAGAAGCTTGCTTTCCAAATGATTCATCAGTTACTGTTTTCTTTCAGTGAATGGAAGATTTTAATACAAAGAAGAGTTTGTAGGCAGACATTGAGAAGAagctctatctcctcaacttagggagtctgctgggatctgcctcagtttgcctgccctgggttatggttgcgaatctctgttaatacagtgattggtgaaaattacagggttcatcttattttgcatctctcagagatcactgtcctttgttgttgtctgatgtccagtgtcttgaaaactactatttcattattt----tatATATATATAAAAATATGTG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5939733 382 - 181584905 AGAAGAAATTTCTTACTCTCATAGGCATCTGTAGGCCAATGGAGATATTCAGCCCTGAAAAGTAAAAAGAAGCTTGCTTTCCAAATGATTCATCAGTTACTGTTTTCTTTCAGTGAATGGAAGATTTTAACACAAAGAAGAGTTTGTAGGCAGACATTGAGAAGAagctctatctcctcaacttagggagtctgctgggatctgcctcagtttgcctgccctgggttatggttgcgaatctctgttaatacagtgattggtgaaaattacagggttcgtcttattttgcatctctcagagatcactgtcctttgttgttgtctgatgtccagtgtcttgaaaactactatttcattattt----tatATATATATAAAAATATGTG i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 970132 382 - 16193990 AGAAGAAATTTCTTACTCTCATAGGCATCTGTAGGCCAATGGAGATATTCAGCCCTGAAAAGTAAAAAGAAGCTTGCTTTCCAAATGATTCATCAGTTACTGTTTTCTTTCAGTGAATGGAAGATTTTAACACAAAGAAGAGTTTGTAGGCAGACATTGAGAAGAagctctatctcctcaacttagggagtctgctgggatctgcctcagtttgcctgccctgggttatggttgtgaatctctgttaatacagtgattggtgaaaattacagggttcgtcttattttgtatctctcagagatcactgtcctttgttgttgtctgatgtccagtgtcttgaaaactactatttcattattt----tatATATATATAAAAATATGTG i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1791298 382 - 21434487 AGAAGAAATTTCTTACTCTCATAGGCATCTATAGGCCAATGGAGATATTCAGCCCTGAAAAGTAAAAAGAAGCTTGCTTTCCAAATGATTCATCAGTTACTGTTTTCTTTCAGTGAATGGCAGATTTTAACACAAATAAGAGTTTGTAGGCAGACATTGAGAAGAagttctatctcctcaatttagggagtctgctgggatctgcctcagtttgcctgccctgggttatggttgcgaatctctgttaatacagtgattggggaaaattacagggttcgtcttattttgcatctctcagagatcactgtcctttgttgttgtctgatgtccagtgtcttgaaaactactatttcattattt----tatGTATATATAAAAATATGTG i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4753845 382 - 82825804 AGAAGAAATTTCTTACTCTCATAGGCATCTATAGGCCAATGGAGATATTCAGCCCTGAAATGTAAAAAGAAGCTTGCTTTCCAAATGATTCATCAGTTACTGTTTTCTTTCAGTGAATGGAAGATTTTAACACAAAGAAGAGTTTGTAGGCAGACATTGAGAAGAagctctatctcctcaacttagggagtctgctgggatctgcctcagtttgcctgccctgggttatggttgcgaatctctgttaatacagtgattggggaaaattacagggttcgtcttattttgcatctctcagagatcattgtcctttgttgttgtctgatgtccagtgtcttgaaaactactatttcattattt----tatatatatataaaaatatgtg i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 259420 382 + 2521317 AGAAGAAATTTCTTACTCTCATAGGCATCTGTAGGCTAATGGAGATATTCAGCCCTGAAAAGTAAAAAGAAGCTTGCTTTCCAAATGATTCATCAGTTACTGTTTTCTTTCAGTGAATGGAAGATTTTAACACAAAGAAGAGTTTGTAGGCAGACATTGAGAAGAagctctatctcctcaacttagggagtctgctgggatctgcctcagtttgcctgccctgggttatggttgcgaatctctgttaatacagtgattggggaaaattacagggttcgtcttattttgcatctctcagagatcactgtcctttgttgttgtctgatgtccagtgtcttgaaaactactatttcattattt----tatatatatataaaaatatgtg i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1740874 386 - 2415367 GGAAGAAATTTCTTACTCTCATAGGCATCTATAGGCCAATGGAGATATTCAGCCCTGAAAAGTAAAAAGAAACTTGCTTTCCAAATGATTCATCAGTTACTGTTTTCTTTCAGTGAATGGAAGATTTTAACACAAAGAAGAGTTTGTAGGCAGACATTGAGAAGAagctctatctcctcaacttagggagtctgctgggatctgcctcagtttgcctgccctgggttatggttgcgaatctctgttaatacagtgatcggggaaaattacagggtttgtcttattttgcatctctcagagatcactgtcctttgttgttgtctgatgtccagtgtcttgaaaactactatttcattattttatGtatatatatatataaatatgta i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64083834 382 + 204313951 AGAAGAAATTTCTTATTCTCATATGCACTCATAGACCAATGGAGATATTCAGCCCTGAAAAGTAAAAAGAAGCTTGCTTTCCAAATGGTATATTAGTTACTGTTTTCTTTCAGTGAATGGAAGATTTTAACACAAAGAAGAGTTTGTAGGCAGACACTGAGAAGAagctctaactcctcaacttagggagtctgccgggatttgccttacgttatctgccctgggttatggttggggatctctgttaatacagtgatggggggaaattacagggctgatcttattttgtatctctcagagatcactgtccttcgttgttgtctgatgtccagggttttggaaactgctatttcattattt----catgtatgtGtgtatatgtgta i calJac3.chr2 I 223 C 0 s saiBol1.JH378186 2210342 382 + 10068113 AGAAGAAATTTCTTACTCTCATATGCACTCATAGGCCAATGGAGATATTCAGCCCTGAAAAGTAAAAAGAAGCTTGCTTTCCAAATGGTTTATCAGTTACTATTTTCTTTCAGTGAATGGAAGATTTTAACACAAAGAAGAGTTTGTAGGCAGGCACTGAGAAGAagctttaactcctcaacttagggagtctgctggaatttgccttactttgtctgccctgggttgtgggtgggaatctctgttaatacagtgatggggggaaattacagggcttatcttattttgtatccctcagagatcactgtcctttgttgttgtctgatgtccagagttttagaaactgctacttcattattt----tatGTATCTGtgtatatgtgtg i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 65425 381 - 709587 AGAAGAAATTTCTTACTCTCATATGCACTCATAGGCCAAGGGAGATATTCAGTCCTGGAAAGTAAAAAGAAGCTTGCTTTCCAAATGGTTTATCAGTTACTCTTTTCTTTCAGTGAACGGAAGATTTTAACACAAAGAAGAGTTTGTAAGCAGACACTGAGAAGAagctctaactcctcaacttagggagtctgctgggatttgccttactttgtctgtcctgggttgtggtcgggaatctctgttaatatagtgat-gggggaaatgacagggcttatcttattttgtacctctcggagatcactgtcctttgttgttgtctgatgtccagggttttggaaactgctatttcattattt----tatGTATGTGTGTATATGTGTA i cebCap1.NW_016107999v1 C 0 I 99 s aotNan1.NW_018501968v1 1165990 382 - 2246441 AGAAGAAATTCCTTACTCTCATATGCACACATAGGCCAATGGAGATATTCAGCCCTGAAAAGTAAAAAGAAGCTTGCTTTCCAAATGGTTTATCAGTTACTATTTTCTTTCAGTGAATGGAAGATTTTAACACCAAGAAGAGTTTGTAGGCAGACCCTGAGAAGAagctctaactcctcaagttagggagtctgctgggatttgccttactttgtctgccctgggttgtggttgggaatctctgttaatacagtgatggggggaaattacagggctgatcttattttgtatctctcagagatcactgtcctttgttgttgtctgatgtccagggttttggaaactgctattttattgttt----tatgtatgtgtgtatatgtgta i aotNan1.NW_018501968v1 C 0 C 0 e mm10.chr13 65979384 6914 - 120421639 I e otoGar3.GL873522 1227194 7559 + 48283576 I e canFam3.chr4 37170079 847 + 88276631 I e proCoq1.NW_012152163v1 758448 6575 - 940639 I e dasNov3.JH562710 245691 6502 - 960158 I a score=6006.000000 s hg38.chr5_KI270795v1_alt 53968 1 + 131892 t s panTro5.chr5 5302505 1 - 181907262 t i panTro5.chr5 C 0 C 0 s panPan2.chr5 5565122 1 - 183735486 t i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1696627 1 + 3967317 t i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4573253 1 + 163208435 t i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5753658 1 - 180051392 T i rheMac8.chr6 C 0 I 64 s macFas5.chr6 5940115 1 - 181584905 T i macFas5.chr6 C 0 I 1 s macNem1.NW_012018466v1 970514 1 - 16193990 T i macNem1.NW_012018466v1 C 0 I 56 s cerAty1.NW_012007035v1 1791680 1 - 21434487 T i cerAty1.NW_012007035v1 C 0 I 46 s chlSab2.chr23 4754227 1 - 82825804 t i chlSab2.chr23 C 0 I 1 s manLeu1.NW_012103943v1 259802 1 + 2521317 t i manLeu1.NW_012103943v1 C 0 I 1 s colAng1.NW_012115755v1 1741260 1 - 2415367 t i colAng1.NW_012115755v1 C 0 I 1 e cebCap1.NW_016107999v1 65806 99 - 709587 I e saiBol1.JH378186 2210724 0 + 10068113 C e mm10.chr13 65979384 6914 - 120421639 I e calJac3.chr2 64084216 0 + 204313951 C e otoGar3.GL873522 1227194 7559 + 48283576 I e canFam3.chr4 37170079 847 + 88276631 I e proCoq1.NW_012152163v1 758448 6575 - 940639 I e dasNov3.JH562710 245691 6502 - 960158 I e aotNan1.NW_018501968v1 1166372 0 - 2246441 C a score=33895.000000 s hg38.chr5_KI270795v1_alt 53969 8 + 131892 tttatata s panTro5.chr5 5302506 8 - 181907262 tttatata i panTro5.chr5 C 0 C 0 s panPan2.chr5 5565123 8 - 183735486 tttatata i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1696628 8 + 3967317 tttatata i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4573254 8 + 163208435 tttatata i nomLeu3.chr2 C 0 C 0 s macFas5.chr6 5940117 8 - 181584905 TTTATATA i macFas5.chr6 I 1 C 0 s chlSab2.chr23 4754229 8 - 82825804 tttatata i chlSab2.chr23 I 1 C 0 s manLeu1.NW_012103943v1 259804 8 + 2521317 tttatata i manLeu1.NW_012103943v1 I 1 C 0 s colAng1.NW_012115755v1 1741262 7 - 2415367 tttatat- i colAng1.NW_012115755v1 I 1 C 0 s calJac3.chr2 64084216 6 + 204313951 --tgtata i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2210724 6 + 10068113 --tatata i saiBol1.JH378186 C 0 C 0 s aotNan1.NW_018501968v1 1166372 6 - 2246441 --tatata i aotNan1.NW_018501968v1 C 0 I 47 e cebCap1.NW_016107999v1 65806 99 - 709587 I e mm10.chr13 65979384 6914 - 120421639 I e otoGar3.GL873522 1227194 7559 + 48283576 I e cerAty1.NW_012007035v1 1791681 46 - 21434487 I e macNem1.NW_012018466v1 970515 56 - 16193990 I e rheMac8.chr6 5753659 64 - 180051392 I e canFam3.chr4 37170079 847 + 88276631 I e proCoq1.NW_012152163v1 758448 6575 - 940639 I e dasNov3.JH562710 245691 6502 - 960158 I a score=18549.000000 s hg38.chr5_KI270795v1_alt 53977 8 + 131892 ta-------aaatat s panTro5.chr5 5302514 8 - 181907262 ta-------aaatat i panTro5.chr5 C 0 C 0 s panPan2.chr5 5565131 8 - 183735486 ta-------aaatat i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1696636 8 + 3967317 ta-------aaatat i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4573262 8 + 163208435 ta-------aaatat i nomLeu3.chr2 C 0 C 0 s macFas5.chr6 5940125 8 - 181584905 AA-------AAATAT i macFas5.chr6 C 0 C 0 s chlSab2.chr23 4754237 8 - 82825804 aa-------aaatat i chlSab2.chr23 C 0 I 14 s manLeu1.NW_012103943v1 259812 8 + 2521317 aa-------aaatat i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1741269 8 - 2415367 aa-------aaatat i colAng1.NW_012115755v1 C 0 I 12 s calJac3.chr2 64084222 8 + 204313951 ta-------atatgt i calJac3.chr2 C 0 I 1 s saiBol1.JH378186 2210730 15 + 10068113 tatatgtgtgtttgt i saiBol1.JH378186 C 0 I 1 e cebCap1.NW_016107999v1 65806 99 - 709587 I e mm10.chr13 65979384 6914 - 120421639 I e otoGar3.GL873522 1227194 7559 + 48283576 I e cerAty1.NW_012007035v1 1791681 46 - 21434487 I e macNem1.NW_012018466v1 970515 56 - 16193990 I e rheMac8.chr6 5753659 64 - 180051392 I e canFam3.chr4 37170079 847 + 88276631 I e proCoq1.NW_012152163v1 758448 6575 - 940639 I e dasNov3.JH562710 245691 6502 - 960158 I e aotNan1.NW_018501968v1 1166378 47 - 2246441 I a score=35614.000000 s hg38.chr5_KI270795v1_alt 53985 21 + 131892 tagatatatg--tatatatatat s panTro5.chr5 5302522 21 - 181907262 tagatatatg--tatatatatat i panTro5.chr5 C 0 C 0 s panPan2.chr5 5565139 21 - 183735486 tagatatatg--tatatatatat i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1696644 23 + 3967317 tagatatatgtatatatatatat i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4573270 21 + 163208435 tatatatatg--tatatatatat i nomLeu3.chr2 C 0 C 0 s macFas5.chr6 5940133 21 - 181584905 tgtgtgtgtg--tgtgtgtgtgt i macFas5.chr6 C 0 I 26 s chlSab2.chr23 4754259 21 - 82825804 tgtgcgcgtg--cgtgtgtgtgt i chlSab2.chr23 I 14 I 2 s colAng1.NW_012115755v1 1741289 21 - 2415367 tgtgtgtgtg--tgtgtgtgtgt i colAng1.NW_012115755v1 I 12 I 2 s calJac3.chr2 64084231 20 + 204313951 tatacataca--tatacacaaa- i calJac3.chr2 I 1 I 50 s saiBol1.JH378186 2210746 20 + 10068113 tatatatatg--tatatatata- i saiBol1.JH378186 I 1 I 44 e cebCap1.NW_016107999v1 65806 99 - 709587 I e mm10.chr13 65979384 6914 - 120421639 I e otoGar3.GL873522 1227194 7559 + 48283576 I e cerAty1.NW_012007035v1 1791681 46 - 21434487 I e macNem1.NW_012018466v1 970515 56 - 16193990 I e rheMac8.chr6 5753659 64 - 180051392 I e canFam3.chr4 37170079 847 + 88276631 I e proCoq1.NW_012152163v1 758448 6575 - 940639 I e dasNov3.JH562710 245691 6502 - 960158 I e aotNan1.NW_018501968v1 1166378 47 - 2246441 I e manLeu1.NW_012103943v1 259820 0 + 2521317 C a score=174126.000000 s hg38.chr5_KI270795v1_alt 54006 46 + 131892 ttgagacagggtctcgctctgttgctcaggctggagtgcagtggtg s panTro5.chr5 5302543 46 - 181907262 ttgagacagggtcttgctctgttgctcaggctggagtgcagtggtg i panTro5.chr5 C 0 C 0 s panPan2.chr5 5565160 46 - 183735486 ttgagacagggtcttgctctgttgctcaggctggagtgcagtggtg i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1696667 46 + 3967317 ttgagacagggtctcgctctgttgctcatgctggagtgcagtggtg i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4573291 46 + 163208435 ttgagacagggtctcactctgttactcagcctggagtgcagtggcg i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5753723 40 - 180051392 ttgagacagggtctcgctccattgct-aggctggagtgcag----- i rheMac8.chr6 I 64 C 0 s macFas5.chr6 5940180 40 - 181584905 ttgagacagggtcttgctccattgct-aggctggagtgcag----- i macFas5.chr6 I 26 C 0 s macNem1.NW_012018466v1 970571 40 - 16193990 ttgagacagggtctcgctccattgct-aggctggagtgcag----- i macNem1.NW_012018466v1 I 56 C 0 s cerAty1.NW_012007035v1 1791727 41 - 21434487 ttgagacagggtctcgctccattgctcaggctggagtgcag----- i cerAty1.NW_012007035v1 I 46 C 0 s chlSab2.chr23 4754282 41 - 82825804 ttgagacagggtctcgctccattgctcaggctggagtgcag----- i chlSab2.chr23 I 2 C 0 s colAng1.NW_012115755v1 1741312 41 - 2415367 ttgagacagggtctcgctccattgctcaggctggagtgcag----- i colAng1.NW_012115755v1 I 2 C 0 e cebCap1.NW_016107999v1 65806 99 - 709587 I e saiBol1.JH378186 2210766 44 + 10068113 I e mm10.chr13 65979384 6914 - 120421639 I e calJac3.chr2 64084251 50 + 204313951 I e otoGar3.GL873522 1227194 7559 + 48283576 I e canFam3.chr4 37170079 847 + 88276631 I e proCoq1.NW_012152163v1 758448 6575 - 940639 I e dasNov3.JH562710 245691 6502 - 960158 I e aotNan1.NW_018501968v1 1166378 47 - 2246441 I e manLeu1.NW_012103943v1 259820 0 + 2521317 C a score=700.000000 s hg38.chr5_KI270795v1_alt 54052 1 + 131892 t s panTro5.chr5 5302589 1 - 181907262 t i panTro5.chr5 C 0 C 0 s panPan2.chr5 5565206 1 - 183735486 t i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1696713 1 + 3967317 t i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4573337 1 + 163208435 t i nomLeu3.chr2 C 0 C 0 s calJac3.chr2 64084301 1 + 204313951 c i calJac3.chr2 I 50 C 0 s saiBol1.JH378186 2210810 1 + 10068113 c i saiBol1.JH378186 I 44 C 0 e cebCap1.NW_016107999v1 65806 99 - 709587 I e mm10.chr13 65979384 6914 - 120421639 I e otoGar3.GL873522 1227194 7559 + 48283576 I e cerAty1.NW_012007035v1 1791768 0 - 21434487 C e macNem1.NW_012018466v1 970611 0 - 16193990 C e rheMac8.chr6 5753763 0 - 180051392 C e macFas5.chr6 5940220 0 - 181584905 C e canFam3.chr4 37170079 847 + 88276631 I e proCoq1.NW_012152163v1 758448 6575 - 940639 I e dasNov3.JH562710 245691 6502 - 960158 I e aotNan1.NW_018501968v1 1166378 47 - 2246441 I e colAng1.NW_012115755v1 1741353 0 - 2415367 C e manLeu1.NW_012103943v1 259820 0 + 2521317 C e chlSab2.chr23 4754323 0 - 82825804 C a score=2101891.000000 s hg38.chr5_KI270795v1_alt 54053 238 + 131892 gatcttggctcactgcaacctccgcctcctgggctcaagcaattcttctgcctcagcttcccaagtagctgggattacaggcacctgccaccatgctgggctaatttttgtatttttagtaaaggcgagttttcaccatgttggccaggctggtctcgaactcctggcctcaagtgatccacccaccttggcctcccaaagtgctgggattacaagtgtgagccactgttccctggcc s panTro5.chr5 5302590 238 - 181907262 gatcttggctcactgcaacctccgcctcctgggctcaagcaattcttctgcctcagcttcccaagtagctgggattacaggcacctgccaccatgctggtctaattcttgtatttttagtaaagacgagttttcaccattttggccaggctggtctcgaactcctggcctcaagtgatccacccaccttggcctcccaaagtgctgggattacaagtgtgagccactgttccctggcc i panTro5.chr5 C 0 C 0 s panPan2.chr5 5565207 238 - 183735486 gatcttggctcactgcaacctccgcctcctgggctcaagcaattcttctgcctcagcttcccaagtagctgggattacaggcacctgccaccatgctggtctaattcttgtatttttagtaaagacgagttttcaccattttggccaggctggtctcgaactcctggcctcaagtgatccacccaccttggcctcccaaagtgctgggattacaagtgtgagccactgttccctggcc i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1696714 238 + 3967317 gatcttggctcactgcaacctccgcctcctgggctcaagcaattcttcagcctcagcttcccaagtagctgggattacaggcacctgccaccatgctgggctaatttttgtatttttagtaaagacgagttttcaccatgttggccaggctggtctcgaactcctggcctcaagtgatccacccaccttggcctcccaaagtgctgggattacaagtgtgagccactgttccctggcc i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4573338 238 + 163208435 gatcttggctcactgcaacctctgcctcctgggctcaagcaattcttctgcctcagcttcccaagtagctgggattacaggcgcctgccaccatgctgggctaatttttgtatttttagtaaaggcgagttttcaccatgttggcgaggctggtctcgaactcctggcctcaagtgatccacccacctttgcctcccaaagtgctgggattacaagtgtgagccactgttccctggcc i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5753763 234 - 180051392 ----ttggctcactgcaacctctgcctcttaggctcaagcaattcttctgcctcagcttcccaagtagctgggattacaggcgcctgccaccatgccaggctaatttttgtatttttagtaaagatggggttttgccatgttggccaggctggtctccaactcctggcctcaagtgatccacccgccttggcctcccaaagtgctgggattacaagtgtgagccactgttccctggcc i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5940220 234 - 181584905 ----ttggctcactgcaacctctgcctcttgggctcaagcaattcttctgcctcagcttcccaagtagctgggattacaggcgcctgccaccatgccgggctaatttttgtatttttagtaaagatggggttttgccatgttggccaggctggtctccaactcctggcctcaagtgatccacccgccttggcctcccaaagtgctgggattacaagtgtgagccactgttccctggcc i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 970611 234 - 16193990 ----ttggctcactgcaacctctgcctcttgggctcaagcaattcttctgcctcagcttcccaagtagctgggattacaggcgcctgccaccatgccgggctaatttttgtatttttagtaaagatggggttttgccatgttggccaggctggtctccaactcctggcctcaagtgatccacccgccttggcctcccaaagtgctgggattacaagtgtgagccactgttccctggcc i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1791768 234 - 21434487 ----ttggctcactgcaacctccgcctcttgggctcaagcaattcttctgcctcagcttcccaagtagctgggattacaggcgcctgccaccatgccgggctaatttttgtatttttagtaaagatggggttttgccacgttgaccaggctggtctccaactcctggcctcaagtgatccactcgccttggcctcccaaagtgctgggattacaagtgtgagccactgttccctggcc i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4754323 234 - 82825804 ----ttggctcactgcaacctccgcctcttgtgctcaagcaattcttctgcctcagcttcccaagtggctgggattacaggtgcctgccaccatgccgggctaatttttgtattttcagtaaagatagggttttgccatgttggccaggctggtctccaactcctggcctcaagtgatccacccgccttggcctcccaaagtgctgggattacaagtgtgagccactgttccctggcc i chlSab2.chr23 C 0 C 0 s colAng1.NW_012115755v1 1741353 233 - 2415367 ----tt-gctcactgcaacctctgcgtcttgggctcaagcaattcttctgcctcagcctcccaagtagctgggattacaggcgcctgccaccatgccgggctaatttttgcatttttagtaaagatggggttttgccatgttggccaggctggtctcgaactcctggcctcaggtgatccacccgccttggcctcccaaagtgctgggattacaagtgtgagccactgttccctggcc i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64084302 238 + 204313951 aGtcttggctcactgcaacctctgcctcctgggcttaagcgattcttctgcctcagtctcctaagtagctgggattacagacgcctgccaccatgccaggctaatttttatatttttagtaaagatggggtttcgccatgttgcccaggctggtctcgaacttctggcctcaagtgatccacctggcttggcctcgcaaagtgctgggattacaagtgtgagccaTTGTTTCCTGGCC i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2210811 235 + 10068113 aatcttggttcactgcaacctctacctcctgggctcaagcgattcttttgcctcagcctcctgagtagctgggattacaggcacctgccaccatgccaggctaatttttgtatttttagtaaagatagggtttcgccatgttacccagg-tggtctcgaactcttggcctcaagtgatccacctggcttggcctcccaaagtgctgggattacaagtgtgagcca--GTTTCTTGGCC i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 65905 237 - 709587 aatcttggctcactgcaacctccgcctcctgggctcaagcaattcttctgcctcagcctcctaagtagctgggattacaggtgcctgacaccatgccaggctaatttttgtatttttagtaaagatggggtttcgccatgttgcccagactggtctcaaactcctggcctcaagtgatccacccggcttagcctc-caaagtgctgggattacaagtgtgagccactgTTTCCTGGCC i cebCap1.NW_016107999v1 I 99 C 0 s aotNan1.NW_018501968v1 1166425 238 - 2246441 AatcttggctcactggaacctccgcctcctgggatcaagcaattcttctgcctcagcctcctaagtagctgggattacaggcgcctgccaccatgccaggctaatttttgtatttttagtaaagatggggtttcgccatgttgcccaggctggtcttgaactcctggcctcaagtgatccacccggcttggcctcccaaagtgctgggattacaagtgtgagccactgTTTCCTGGCC i aotNan1.NW_018501968v1 I 47 C 0 e mm10.chr13 65979384 6914 - 120421639 I e otoGar3.GL873522 1227194 7559 + 48283576 I e canFam3.chr4 37170079 847 + 88276631 I e proCoq1.NW_012152163v1 758448 6575 - 940639 I e dasNov3.JH562710 245691 6502 - 960158 I e manLeu1.NW_012103943v1 259820 0 + 2521317 C a score=242055.000000 s hg38.chr5_KI270795v1_alt 54291 24 + 131892 tatttcatatatttttaatggttt- s panTro5.chr5 5302828 24 - 181907262 tatttcatatatttttaatggttt- i panTro5.chr5 C 0 C 0 s panPan2.chr5 5565445 24 - 183735486 tatttcatatatttttaatggttt- i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1696952 24 + 3967317 tatttcatatatttttaatggttt- i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4573576 24 + 163208435 tatttcatacatttttaatggttt- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5753997 24 - 180051392 tatttcatatatttttaatggttt- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5940454 24 - 181584905 tatttcatatatttttaatggttt- i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 970845 24 - 16193990 tatttcatatatttttaatggttt- i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1792002 24 - 21434487 tatttcatatatttttaatggttt- i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4754557 24 - 82825804 tatttcatatatttttaatggttt- i chlSab2.chr23 C 0 C 0 s colAng1.NW_012115755v1 1741586 24 - 2415367 tatttcatatatttttaatggttt- i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64084540 24 + 204313951 TATTTCATATATTTTTAATGGTTT- i calJac3.chr2 C 0 I 872 s saiBol1.JH378186 2211046 24 + 10068113 tatttcatatatgtttaatggttt- i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 66142 24 - 709587 tatttcgtttatttttaatggttt- i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1166663 24 - 2246441 tatttcatatatttttaatggttt- i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1234753 25 + 48283576 tgttttatatatttttaatgggttt i otoGar3.GL873522 I 7559 C 0 e mm10.chr13 65979384 6914 - 120421639 I e canFam3.chr4 37170079 847 + 88276631 I e proCoq1.NW_012152163v1 758448 6575 - 940639 I e dasNov3.JH562710 245691 6502 - 960158 I e manLeu1.NW_012103943v1 259820 0 + 2521317 C a score=4033548.000000 s hg38.chr5_KI270795v1_alt 54315 458 + 131892 cttggttgttttcaatggtaggataaatcaagattctgttacttcatcttggctagaagcagaaattctttaagtttttattgtgagaattttcaaagatacagagtcgttaaaagaatgatacaatgattatttgtatacttagcacttggattcaggaactgtgtgtgtgagtgtgtgtgtgtgtgtgtg------------------cacgcacgcctg------ccatgtttatatatttgctggaccatttgaaactaaattgtggaggtatcaggacatttcaccactaaatcactaaacacattggcctgaaactcctaaaaataaggacagtctcctgcataatcacaccaccagtatcacacctaagaagatgaaatcattccc-tttatcatctgtattagttatctgctgctgggtaacaaaatactccaaaacatagcatttaacaccacaaatatttt-ttatctcacagt s panTro5.chr5 5302852 443 - 181907262 cttggttgttttcaatggtaggataaatcaagattctgttacttcatcttggctagaagc------------agtttttattgtgagaattttcaaagatacagagtcgttaaaagaatgatacaatgattatttgtatacttagcacctggattcaggaactgtgtgagtgtgtgtgtgtgtgtgtgcgtg--------------------cgcacgcctg------ccatgtttatatatttgctggaccatttgaaactaaattgtagaggtgtcaggacatttcaccactaaatcactaactacattggcctgaaactcctaaaagtaaggacagtctcctgcataatcacaccaccagtatcacacctaagaaGATGAAATCATTCCC-TTTATCATCtgtattagttatctgctgctgggtaacaaaatactccaaaacatagcatttaacaccacaaata-ttt-ttatctcacagt i panTro5.chr5 C 0 C 0 s panPan2.chr5 5565469 449 - 183735486 cttggttgttttcaatggtaggataaatcaagattctgttacttcatcttggctagaagc------------agtttttattgtgagaattttcaaagatacagagtcgttaaaagaatgatacaatgattatttgtatacttagcacctggattcaggaactgtgtgagtgtgtgtgtgtgtgtgtgtgtg--------------tgcgcgcgcacgcctg------ccatgtttatatatttgctggaccatttgaaactaaattgtagaggtgtcaggacatttcaccactaaatcactaactacattggcctgaaactcctaaaaataaggacagtctcctgcataatcacaccaccagtatcacacctaagaagatgaaatcattccc-tTTATCAACtgtattagttatctgctgctgggtaacaaaatactccaaaacatagcatttaacaccacaaata-ttt-ttatctcacagt i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1696976 475 + 3967317 cttggttgttttcaatggaaggataaatcaagattctgttacttcatcttggctagaagcagaaattctttaagtttttattgtgagaattttcaaagatacagagtcgttaaaagaatggtacaatgattatttgtatacttagcacctggattcaggaactgtgtgtgtgagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcgcgcgcgcgcctg------ccatgtttatatatttgctggaccatttgaaactaaattgtagaggtatcaggacatttcaccactaaatcactaactacattggcctgaaactcctaaaaataaggacagtctcctgcatgatcacaccaccagtatcacacctaagaagatgaaatcattccc-tttatcatctgtattagttatctgctgctgggtaacaaaatactccaaaacatagcatttaacaccacaaata-ttt-ttatctcacagt i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4573600 467 + 163208435 cttggttgttttcaatggtaggatacatcaagattctgttacttcatcttggctagaagcagaaattctttaagtttttattgtgagaattttcaaagat--agagtcgttaaaagaatgatacaatgattatttgtatacttagcacctggattcAGGAACTCtgtgtgtgtgtgtgtgtgtgtgtgtgtg------tgtgtgtgtgtgtgtgtgtgCCTG------CCATGTTTATATAtttgctggatcatttgaaactaaattgtagaggtatcaggacatttcaccactaaatcactaaatacattggcctgaaactcctaaaaataaggacagtctcctgcataatcacaccaccagtatcacacctaagaagatgaaatcattccc-tttgtcatctgtattagttatctgctgctgggtaacaaaatactccaaaacgtagcatttaacaccacaaata-ttt-ttatctcacagt i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5754021 468 - 180051392 cttggttgttttcaatggtaggataaatcaagattctgttacttcatcttggctagaagcagatattatttaagtTTTTATTGTGAGAATTTTC--AGATACAGAGTCGTTAAAAGAATGGTGCAATGATTATTTGAATACTTAGCACCTGGATTCAGGAACCgtgtgcgtgtgtgtgtgtgCGCATGCGCG--CACACAGGTGCACATGTGCATGCTCGTG------CCATGTTTATATAtttgctggaccatttgaaactaaattgtcgaggtatcaggacatttcaccactaaatcactaaatacattggcatgaaactcctaaa---aacaacagtctcctgcataatcacaccaccagtatcacacctaagaagatgaaatcattgcc-tttatcatctgtattagttatctgctgctgggtaacaaaatactccaaaacatagcatttaacaccacaaata-ttt-ttatctcacagt i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5940478 468 - 181584905 cttggttgttttcaatggtaggataaatcaagattctgttacttcatcttggctagaagcagatattatttaagtTTTTATTGTGAGAGTTTTC--AGATACAGAGTCGTTAAAAGAATGGTGCAATGATTATTTGAATACTTAGCACCTGGATTCAGGAACCgtgtgcgtgtgtgtgtgtgcgcgtgCGCG--CACACAGGCGCACATGTGCATGCTCGTG------CCATGTTTATATATTTGctggaccatttgaaactaaattgtcgaggtatcaggacatttcaccactaaatcactaaatacattggcatgaaactcctaaa---aacgacagtctcctgcataatcacaccaccagtatcacacctaagaagatgaaatcattgcc-tttatcatctgtattagttatctgctgctgggtaacaaaatactccaaaacatagcatttaacaccacaaata-ttt-ttatctcacagt i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 970869 468 - 16193990 cttggttgttttcaatggtaggataaatcaagattctgttacttcatcttggctagaagcagatattatttaagtTTTTATTGTGAGAATTTTC--AGATACAGAGTCGTTAAAAGAATGGTGCAATGATTATTTGAATACTTAGCACCTGGATTCAGGAACCgtgtgcgtgtgtgtgtgtgcgcgtgCGCG--CACACAGGCGCACATGTGCATGCTCGTG------CCATGTTTATATAtttgctggaccatttgaaactaaattgtcgaggtatcaggacatttcaccactaaatcactaaatacattggcatgaaactcctaaa---aacgacagtctcctgcataatcacaccaccagtatcacacctaagaagatgaaatcattgct-tttatcatctgtattagttatctgctgctgggtaacaaaatactccaaaacatagcatttaacaccgcaaata-ttt-ttatctcacagt i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1792026 468 - 21434487 cttggttgttttcaatggtaggataaatcaagattctgttacttcatcttggctagaagcagaaattatttaagtttttattgtgagaattttc--agatacaGAGTCGTTAAAAGAATGGTGCAATGATTATTTGAATACTTAGCACCTGGATTCAGGAATCgtgtgcgtgtgtgtgtgtgcgcgtgcgtg--CACACAGGCGCACATGTGCATGCTCGTG------CCATGTTTATATAtttgctggaccatttgaaactaaattgtcgcggtatcaggacatttcaccactaaatcactaaatacattggcatgaaactcctaaa---aacgacagtctcctgcataatcacaccaccagtatcacacctaagaagatgaaatcattgcc-tttatcatctgtattagttatctgctgctgggtaacaaaatactccaaaacatagcatttaacaccacaaata-ttt-ttatctcacagt i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4754581 468 - 82825804 cttggttgttttcaatggtaggataaatcaagattctgttacttcatcttggctagaagcagaaattatttaagtttttattgtgagaattttc--agatacagagtcgttaaaagaatggtacaatgattatttgaatacttagcacctggattcAGGAACCATgtgcgtgtgtgtgtgcgcgcgtgcgtg--cACACAGGCGCACATGTGCGTGCTCGTG------CCATGTTTATATAtttgctggaccgtttgaaactaaattgtcgaggtatcaggacatttcaccactaaatcactaaatacattggcatgaaactcctaaa---aaggacagtctcctgcataatcacaccaccagtatcacacctaagaagatgaaatcattgcc-tttatcatctgtattagttatctgctgctgggtaacaaaatactccaaaacatagcatttaacaccgcaaata-ttt-ttatctcacagt i chlSab2.chr23 C 0 C 0 s colAng1.NW_012115755v1 1741610 460 - 2415367 cttggttgttttcaatggtaggataaatcaagattctgttacttcatcttggctagaagcagaaattctttaagtttttattgtgagaattttc--agatacagagtggttaaaagaatgatacaatgattatttgtatacttagcacctggattcAGGAACtgtgcgtgtgtgtgtgtgtgtgcgcgcgcg--cacgcacgcgcgc--------gctcgtg------cCATGTTTATAAATTTGctggaccatttgaaactaaatggtcgaggtatcaggacatttcaccattaaatcactaaatacattggcatgaaactcctaaa---aaggacagtctcctgcataatcacaccaccagtatcacacctaagaagatgaaatcattgcc-tttatcatctgtattagttatctgctgctgggtaacaaaatactccaaaacatagcatttaacaccacaaata-ttt-ttatctcacagt i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64085436 450 + 204313951 cttgtttgtttttaatgataggttaagtcagaattctgttacttcatcttgact------agaagttctttaAGtttttattgtgagaattctcaaagatatagacttgttaaaagaatgatacaatgattatttgtatacttacca-tcagattcaggaacttagtatttgtgtgtgtgtgtgtgtgtgtg--cacacatgcacg----------------------ccatgtttatatatttgctgaaccatttgaaactaaagtgtagaggtgtcaggatatatcaccactaaatcactaaatactttgaaatgaaactcctaaaaataaggagattctcctgcataatcacactagcagaatcacacctaagaagatgaaatcattccc-tttatcatctgtattcgttatctgctgctgggtaacaaagtactccaaaacatagcatttaacactgcaaata-ttt-ttatctcacagt i calJac3.chr2 I 872 C 0 s saiBol1.JH378186 2211070 456 + 10068113 cttggttgtttttaatgataggttaagtcagaattccgttatttcatcttgactacaagcagaagtTCTTTAAGtttttcttgtgagaattttc--agatatagagttgttaaaagaatgatacaatgattatttgtatacttaccacccagattcaggaacttagtatttgtgtgtgtgtgtgtgtgtgtg--tgtgtgtgtgtgagcgc-----------------ccatgtttatgtatttgctgaaccatttgaaactaaagtgcagaggtgtcaggacatatcaccactaaatcactaaatacattggaatgaaactcctaaaaataaggagattctcctgcataatcacactaccag-atcacacct---aagatgaaatcattccc-tttatcatctgtattagttatctgcttctgggtaacaaagtactccaaaacatggcatttaacaccgcaaata-ttt-ttatctcacagc i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 66166 479 - 709587 cttggttgtttttaatggtaggttaagtcagaattctgttacttcatcttgactagaagcagaagttctttaagtttttattgtgagaattttcaaagatatagagttgttaaaagcatgatacaatgattatttgtatacttaccacccagattcaggaacttagtatttgtgtgtgtgtgtgtgtgtgtg--tgtgtgtgtgtgtgtgtgtgcgcgcgcgcgcacgccgtgtttatatatttgctgaaccatttgaaactaaagtgtagaggtgtcaggacatatcaccactaaatcactaaatacattggaatgaaactcctaaaaataaggagattctcctgcataatcacactaccagaatcacacctaagaagatgaaagcattccc-tttatcatctgtattagttacctcctgctgggtaacaaagtactccaaaacatagcatttaacactgcaaata-ttt-ttatctcacagt i cebCap1.NW_016107999v1 C 0 M 320 s aotNan1.NW_018501968v1 1166687 463 - 2246441 cttggttgtttttaatgataggttaagtcagaattctgttacttcatcttgactagaagcagtagttctttaaatttttattatgagaattttcaaagatatagtgttgttaaaagaatgatacaatgattatttgtatacttaccacccagattcaggaacttagtatttgtgtgtgtgtgtgtgtgcacg--cgcacgcatgcgcacgca----------------ccgtgtttatatatttgctgaaccatttgaaactaaagtgtagaggtttcaggacatatcaccactaaatcactaaatacattggaatgaaactcctaaaaataaggagattctcctgcataatcacactaccagaatcacatctaagaagatgaaatcattccc-tttatcatctgtattagttatctgctgctgggtaacaaagtactccaaaacatagcatttaacaccgcaaata-ttt-ttatctcacagt i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1234778 430 + 48283576 tttggtagctttcagtgggaggataaatctggattatattactccatcttggctagaagcaggagttctctaag-ttttattgtgaaaattgtcaaagctacacagaagtaaaaagaataatacaatgatcacctgtatacttactaccttaattcagtaactttttgtatttgtatctgtgtgtgtgtgtg--------------------------catg------ccatgtttatatctttgttgaatgatttaaaactaaattgtggaggcatcatgacattttacccctaaat--------atatttggatgcatgtcctaaaaataagggaattctcctG-----------TACCAATGTTATAGCTAAGAATATAAAATTCTTCCCTTTTATCATCtgtattagttatctactgctgtgtaacaaaatattcctaaac-tagcacttcatacaataaaca-tttgtttcctcacagt i otoGar3.GL873522 C 0 C 0 e mm10.chr13 65979384 6914 - 120421639 I e canFam3.chr4 37170079 847 + 88276631 I e proCoq1.NW_012152163v1 758448 6575 - 940639 I e dasNov3.JH562710 245691 6502 - 960158 I e manLeu1.NW_012103943v1 259820 0 + 2521317 C a score=133125.000000 s hg38.chr5_KI270795v1_alt 54773 17 + 131892 gctcgacggttagaaat s panTro5.chr5 5303295 17 - 181907262 gcccgactgttagaaat i panTro5.chr5 C 0 C 0 s panPan2.chr5 5565918 17 - 183735486 gcccgactgttagaaat i panPan2.chr5 C 0 I 1515 s gorGor5.CYUI01015413v1 1697451 17 + 3967317 gcccgactgttagaaat i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4574067 17 + 163208435 gcccgactgttagaaat i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5754489 17 - 180051392 gcccgagtgttagaaat i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5940946 17 - 181584905 gcccgagtgttagaaat i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 971337 17 - 16193990 gcccgagtgttagaaat i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1792494 17 - 21434487 gcccgagtgttagaaat i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4755049 17 - 82825804 gcccgagtgttagaaat i chlSab2.chr23 C 0 C 0 s colAng1.NW_012115755v1 1742070 17 - 2415367 gcccgagtgttagaaat i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64085886 17 + 204313951 gcctgggtgttagatat i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2211526 17 + 10068113 gcctgagtgttagaaat i saiBol1.JH378186 C 0 C 0 s aotNan1.NW_018501968v1 1167150 17 - 2246441 gcctgagtgttagatat i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1235208 17 + 48283576 tcctaagtgttagaatt i otoGar3.GL873522 C 0 C 0 e cebCap1.NW_016107999v1 66645 320 - 709587 M e mm10.chr13 65979384 6914 - 120421639 I e canFam3.chr4 37170079 847 + 88276631 I e proCoq1.NW_012152163v1 758448 6575 - 940639 I e dasNov3.JH562710 245691 6502 - 960158 I e manLeu1.NW_012103943v1 259820 0 + 2521317 C a score=38276.000000 s hg38.chr5_KI270795v1_alt 54790 4 + 131892 ctga s panTro5.chr5 5303312 4 - 181907262 ctga i panTro5.chr5 C 0 I 1665 s panPan2.chr5 5567450 4 - 183735486 Ctga i panPan2.chr5 I 1515 C 0 s gorGor5.CYUI01015413v1 1697468 4 + 3967317 ctga i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4574084 4 + 163208435 ctga i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5754506 4 - 180051392 ctga i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5940963 4 - 181584905 ctga i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 971354 4 - 16193990 ctga i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1792511 4 - 21434487 ctga i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4755066 4 - 82825804 ctga i chlSab2.chr23 C 0 C 0 s colAng1.NW_012115755v1 1742087 4 - 2415367 ctga i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64085903 4 + 204313951 ttga i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2211543 4 + 10068113 ctga i saiBol1.JH378186 C 0 C 0 s aotNan1.NW_018501968v1 1167167 4 - 2246441 ctga i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1235225 4 + 48283576 ctga i otoGar3.GL873522 C 0 C 0 e cebCap1.NW_016107999v1 66645 320 - 709587 M e mm10.chr13 65979384 6914 - 120421639 I e canFam3.chr4 37170079 847 + 88276631 I e proCoq1.NW_012152163v1 758448 6575 - 940639 I e dasNov3.JH562710 245691 6502 - 960158 I e manLeu1.NW_012103943v1 259820 0 + 2521317 C a score=828632.000000 s hg38.chr5_KI270795v1_alt 54794 106 + 131892 aagcagctt-ag-ctggatggttctggctcagagtctc-tcat-gaggttgcaataaagcttccagctgaa---gca-gacgtctcc--aggcttgtt-cagtggctgatgtctgga s panTro5.chr5 5304981 110 - 181907262 aagcagcttcag-ctggatggttctggctcagagtctcatcattgaggttgcaataaagCTTCAAGCTGAA---GCATGACATCTTcctaggcttgtttcagtggctgatg-ct--a i panTro5.chr5 I 1665 C 0 s panPan2.chr5 5567454 106 - 183735486 aagcagctt-ag-ctggatggttctggctcagagtctc-tcat-gaggttgcaataaagcttccagctgaa---gca-gacatctcc--aggcttgtt-cagtggctgatgtctgga i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1697472 106 + 3967317 aagcagctt-ag-ctggatggttctggctcagagtctc-tcat-gatgttgcaataaagcttccagctgaa---gca-gacatctcc--aggcttgtt-cagtggctgatgtctgga i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4574088 105 + 163208435 aagcagctt-ag-ctggatggttctggctcagagtctc-tcat-gaggttgcaataaagcttccagttgaa---gca-gagatctcc--a-gcttatt-cagtggctgatgtctgga i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5754510 106 - 180051392 aagcagctt-ag-ctggatagttctggctcagagtctc-tcat-gaagttgcaataaagcttccagttgaa---gca-gacatctcc--agacttgtt-cagtgactgatgtctgga i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5940967 106 - 181584905 aagcagctt-ag-ctggatggttctggctcagagtctc-tcat-gaagttgcaataaagcttccagttgaa---gca-gacatctcc--agacttgtt-cagtgactgatgtctgga i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 971358 106 - 16193990 aagcagctt-ag-ctggatggttctggctcagagtctc-tcat-gaagttgcaataaagcttccagttgaa---gca-gacatctcc--agacttgtt-cagtgactgatgtctgga i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1792515 106 - 21434487 aagcagctt-ag-ctggatggttctggctcagagtctc-tcac-gaggttgcaataaagcttccagttgaa---gca-gacatctcc--agacttgtt-cagtgactgatgtctgga i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4755070 106 - 82825804 aagcagctt-ag-ctggatggttctggctcagagtctc-tcat-gaggttgcaataaagcttccagttgaa---gca-gacatctcc--agacttgtt-cagtggctgatgtctgga i chlSab2.chr23 C 0 C 0 s colAng1.NW_012115755v1 1742091 107 - 2415367 aagcagctt-agcctggatggttctggctcagagtctc-tcat-gaggttgcaataaagcttccagttgaa---gca-gacatctcc--agacttgTT-CAGTGGCTGACGTTTGGA i colAng1.NW_012115755v1 C 0 M 235 s calJac3.chr2 64085907 104 + 204313951 aggcagctt-ag-ctggatggttgtggctcagag--tc-tcat-gaggttgcaataaatcttccagttgaa---gca-gatgtctcc--agacttgtt-cagtggctgatgtgtgga i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2211547 106 + 10068113 aggcagctt-ag-ctggatggttctggctccgagtctc-tcat-gaggttgcaataaatcttccagttgga---tca-gacgtctcc--agacttgtt-cagtggctgatgtgcgga i saiBol1.JH378186 C 0 C 0 s aotNan1.NW_018501968v1 1167171 105 - 2246441 aggcagctt-ag-ctggatggttctggctcagagtctc-tcat-gaggttgcaataaatcttccagttgaa---gca-gacgtctcc--agattt-tt-cagtggctgatgtgtgga i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1235229 109 + 48283576 aagcagctt-tg-ctgtgtagttctgatgcagggtctt-tctt-gaggttgcagtagatctgttggtggaagctgca-gtcatctaa--agctgtatt-caggggctgATGTCTGAA i otoGar3.GL873522 C 0 C 0 e cebCap1.NW_016107999v1 66645 320 - 709587 M e mm10.chr13 65979384 6914 - 120421639 I e canFam3.chr4 37170079 847 + 88276631 I e proCoq1.NW_012152163v1 758448 6575 - 940639 I e dasNov3.JH562710 245691 6502 - 960158 I e manLeu1.NW_012103943v1 259820 0 + 2521317 C a score=128316.000000 s hg38.chr5_KI270795v1_alt 54900 19 + 131892 agcctgaggttctttctcc s panTro5.chr5 5305091 14 - 181907262 agcc-gag----tttctcc i panTro5.chr5 C 0 C 0 s panPan2.chr5 5567560 19 - 183735486 agcctgaggttctttctcc i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1697578 19 + 3967317 agcctgaggttctttctcc i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4574193 19 + 163208435 agcctgaggttctttctcc i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5754616 19 - 180051392 agcctgaggttctttctcc i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5941073 19 - 181584905 agcctgaggttctttctcc i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 971464 19 - 16193990 agcctgaggttctttctcc i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1792621 19 - 21434487 agcctgaggttctttctcc i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4755176 19 - 82825804 agcctgaggttctttcttc i chlSab2.chr23 C 0 C 0 s calJac3.chr2 64086011 19 + 204313951 agcctgaggtcctttcttc i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2211653 19 + 10068113 agcctgagttcctttcttc i saiBol1.JH378186 C 0 C 0 s aotNan1.NW_018501968v1 1167276 19 - 2246441 agcctgaggtcctttcttc i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1235338 19 + 48283576 AGCCTGGGGTCTTTGCTTC i otoGar3.GL873522 C 0 C 0 e cebCap1.NW_016107999v1 66645 320 - 709587 M e mm10.chr13 65979384 6914 - 120421639 I e canFam3.chr4 37170079 847 + 88276631 I e proCoq1.NW_012152163v1 758448 6575 - 940639 I e dasNov3.JH562710 245691 6502 - 960158 I e colAng1.NW_012115755v1 1742198 235 - 2415367 M e manLeu1.NW_012103943v1 259820 0 + 2521317 C a score=547420.000000 s hg38.chr5_KI270795v1_alt 54919 72 + 131892 attgcccgatc--tagtctacctga--gcattgtcacaacgtggcagatgccttcacccaaagcaaaggatctttg s panTro5.chr5 5305105 74 - 181907262 cattcCCGATC--TAGTCTACCTACTTGCATTGtcacagcgtggcagatgccttcacccaaagcaaaggatctttg i panTro5.chr5 C 0 C 0 s panPan2.chr5 5567579 72 - 183735486 attgcccgatc--tagtctacctga--gcattgtcacagcgtggcagatgccttcacccaaagcaaaggatctttg i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1697597 72 + 3967317 gttgcccgatc--tagtctacctga--gcattgtcacaatgtggcagatgccttcacccaaagcaaaggatctttg i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4574212 72 + 163208435 attgcctgacc--tagtctacctga--gcattgtcacaacatggcagatgccttcacccaaagcaaaggatctttg i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5754635 72 - 180051392 attgctcgatc--cagtctgcctga--gcattgtcgcagcagggcagatgccttcacccaaagcaaaggatctttg i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5941092 72 - 181584905 attgctcgatc--cagtctgcctga--gcattgtcgcagcagggcagatgccttcacccaaagcaaaggatctttg i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 971483 70 - 16193990 attgctcgatc--cagtctgcctga--gcattgtcgcagcagggcagataccttcacccaaagcaaaggatctt-- i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1792640 70 - 21434487 attgctcgatc--cagtctgcctga--gcattgtcgcagcagggcagatgccttcacccaaagcaaaggatctt-- i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4755195 70 - 82825804 attgctcgatc--cagtctgcctga--gcattgtcacagcagggcagatgccttcacccaaagcaaaggatctg-- i chlSab2.chr23 C 0 C 0 s calJac3.chr2 64086030 72 + 204313951 attgctccatc--cagtctacctga--ccattgtcacaacatggcagatgccttcacccaaagcaaaagatctttg i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2211672 72 + 10068113 attgccccacc--cagtctacctga--gcattgtcacaacatggcagatgccttcacccgaagcaaaagatctttg i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 66965 72 - 709587 ATTGCCCCATC--CAGTctacctga--gcattgtcacaacatggcagatgccttcacccaaagcaaaagatcttcg i cebCap1.NW_016107999v1 M 320 C 0 s aotNan1.NW_018501968v1 1167295 72 - 2246441 attgccccatc--cagtctacctga--gcattgtcacaacatggcagatgccttcacccaaagcaaaagatctgtg i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1235357 74 + 48283576 ATTACTCTGTCTGTAAGCTACCAGA--GCATTATAACAGCTTAGCAAATGCCTTCACCCAAAACAAGAGAGTTAAG i otoGar3.GL873522 C 0 C 0 e mm10.chr13 65979384 6914 - 120421639 I e canFam3.chr4 37170079 847 + 88276631 I e proCoq1.NW_012152163v1 758448 6575 - 940639 I e dasNov3.JH562710 245691 6502 - 960158 I e colAng1.NW_012115755v1 1742198 235 - 2415367 M e manLeu1.NW_012103943v1 259820 0 + 2521317 C a score=187194.000000 s hg38.chr5_KI270795v1_alt 54991 38 + 131892 tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt--a s panTro5.chr5 5305179 40 - 181907262 tgtgtgtgtgtgtgtgtgtgtgcgcgcgtgtgtgtgtgaa i panTro5.chr5 C 0 C 0 s panPan2.chr5 5567651 32 - 183735486 tgtgtgtgtgtgtgtgt--------gcgtgtgtgtgtgaa i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1697669 40 + 3967317 tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgaa i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4574284 38 + 163208435 tgtgtgtgtgtgtgtgtgtgtgt--gtgtgtgtgtgtgaa i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5754707 38 - 180051392 --tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgca i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5941164 38 - 181584905 --tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgca i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 971553 22 - 16193990 ------------------tgtgtgtgtgtgtgtgtgtgca i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1792710 30 - 21434487 ----------tgtgtgtgtgtgtgtgtgtgtgtgtgtgca i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4755265 38 - 82825804 --tgtgtgtgtgtgtgtgtgtgtgtgtgcgcgcgtgtgca i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 259820 38 + 2521317 --tgtgtgtgtgtgtgtgtatgtgtgtgtgtgtgtgCGCA i manLeu1.NW_012103943v1 C 0 C 0 s calJac3.chr2 64086102 38 + 204313951 --tgtgtgtgtgtgtgtttgtgtgtctgtgtgcatgtgcg i calJac3.chr2 C 0 I 6 s saiBol1.JH378186 2211744 20 + 10068113 --tgtgtg------------------tgtgtgcacgtgca i saiBol1.JH378186 C 0 I 6 s cebCap1.NW_016107999v1 67037 38 - 709587 --tgtgtgtgtgtgtgtgtgtgtgtctgtgtctgtgtgca i cebCap1.NW_016107999v1 C 0 I 17 s aotNan1.NW_018501968v1 1167367 34 - 2246441 --tgtgtg----tgtgtgtgtgtgtttgtgtgcacatgcg i aotNan1.NW_018501968v1 C 0 I 6 s otoGar3.GL873522 1235431 13 + 48283576 --------------------------TGTGTAT-TATGTA i otoGar3.GL873522 C 0 C 0 e mm10.chr13 65979384 6914 - 120421639 I e canFam3.chr4 37170079 847 + 88276631 I e proCoq1.NW_012152163v1 758448 6575 - 940639 I e dasNov3.JH562710 245691 6502 - 960158 I e colAng1.NW_012115755v1 1742198 235 - 2415367 M a score=44247.000000 s hg38.chr5_KI270795v1_alt 55029 7 + 131892 tgagagc s panTro5.chr5 5305219 7 - 181907262 tgagagc i panTro5.chr5 C 0 C 0 s panPan2.chr5 5567683 7 - 183735486 tgagagc i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1697709 7 + 3967317 tgagagc i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4574322 7 + 163208435 tgagagt i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5754745 7 - 180051392 tgagagc i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5941202 7 - 181584905 tgagagc i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 971575 7 - 16193990 tgagagc i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1792740 7 - 21434487 tgagagt i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4755303 7 - 82825804 tgagagc i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 259858 7 + 2521317 TGagagc i manLeu1.NW_012103943v1 C 0 C 0 s calJac3.chr2 64086146 7 + 204313951 tgaaaca i calJac3.chr2 I 6 C 0 s saiBol1.JH378186 2211770 7 + 10068113 tgaaaga i saiBol1.JH378186 I 6 C 0 s aotNan1.NW_018501968v1 1167407 5 - 2246441 tgaaa-- i aotNan1.NW_018501968v1 I 6 C 0 s otoGar3.GL873522 1235444 7 + 48283576 TGagaga i otoGar3.GL873522 C 0 C 0 e cebCap1.NW_016107999v1 67075 17 - 709587 I e mm10.chr13 65979384 6914 - 120421639 I e canFam3.chr4 37170079 847 + 88276631 I e proCoq1.NW_012152163v1 758448 6575 - 940639 I e dasNov3.JH562710 245691 6502 - 960158 I e colAng1.NW_012115755v1 1742198 235 - 2415367 M a score=240890.000000 s hg38.chr5_KI270795v1_alt 55036 41 + 131892 gagaga------------------g--------------agagagagagagcaagtacccaag------acggaagctg s panTro5.chr5 5305226 41 - 181907262 gagaga------------------a--------------agagagagagagcaagtacccaag------acggaagctg i panTro5.chr5 C 0 C 0 s panPan2.chr5 5567690 41 - 183735486 gagaga------------------a--------------agagagagagagcaagtacccaag------acggaagctg i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1697716 45 + 3967317 gagaga------------------a----------agagagagagagagagcaagtacccaag------acagaagctg i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4574329 55 + 163208435 gagaga------------------aagagagagagagagagagagagagagcaagtacccaag------acggaagctg i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5754752 33 - 180051392 gag----------------------------------------agagagagcaagtacccaag------acggaagctg i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5941209 37 - 181584905 gagaga------------------a------------------agagagagcaagtacccaag------acggaagctg i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 971582 37 - 16193990 gagaga------------------a------------------agagagagcgagtacccaag------acggaagctg i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1792747 37 - 21434487 gagaga------------------a------------------agagagagcaagtacccaag------acggaagctg i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4755310 39 - 82825804 gagaga------------------a----------------agagagagagcaagtacccaag------acggaagctg i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 259865 37 + 2521317 gagaga------------------a------------------agagagagcaagtacccaag------atggaagctg i manLeu1.NW_012103943v1 C 0 C 0 s calJac3.chr2 64086153 31 + 204313951 gagaga------------------------------------------gcgcaagtacccaag------tcggaagctg i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2211777 65 + 10068113 gagagagagagagagagagagagag--------------agagagagcgtgcaagtacccaagtcagaatcagaagctg i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 67092 41 - 709587 gagaga------------------g--------------agagagcgcgcgcaagtacccaag------tcggaagctg i cebCap1.NW_016107999v1 I 17 C 0 s aotNan1.NW_018501968v1 1167412 41 - 2246441 gagaga------------------g--------------cgagtgagcgcgcaagtacccaag------tcagaagctg i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1235451 21 + 48283576 ----------------------------------------------------gagtgcccaag------gtggaaactg i otoGar3.GL873522 C 0 C 0 e mm10.chr13 65979384 6914 - 120421639 I e canFam3.chr4 37170079 847 + 88276631 I e proCoq1.NW_012152163v1 758448 6575 - 940639 I e dasNov3.JH562710 245691 6502 - 960158 I e colAng1.NW_012115755v1 1742198 235 - 2415367 M a score=266942.000000 s hg38.chr5_KI270795v1_alt 55077 25 + 131892 tagtcttttataa-ccattcacagca s panTro5.chr5 5305267 25 - 181907262 tagtcttttataa-ctattcacagca i panTro5.chr5 C 0 C 0 s panPan2.chr5 5567731 25 - 183735486 tagtcttttataa-gtattcacagca i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1697761 25 + 3967317 tagtcttttataa-ctattcacagca i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4574384 25 + 163208435 tagtcttttataa-ctattcacagca i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5754785 25 - 180051392 tagtcttttataa-ctgttcacagca i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5941246 25 - 181584905 tagtcttttataa-ctgttcacagca i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 971619 25 - 16193990 tagtcttttataa-ctgttcacagca i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1792784 25 - 21434487 tagtcttttataa-ctgttcacagca i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4755349 25 - 82825804 tagtcttttataa-ctgctcacagca i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 259902 25 + 2521317 tagtcttttataa-ctgttcacagca i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1742433 25 - 2415367 TAgtcttttataa-ctgttcacagca i colAng1.NW_012115755v1 M 235 C 0 s calJac3.chr2 64086184 25 + 204313951 tagtcttttataa-ctgtacacagca i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2211842 25 + 10068113 gagtcttttataa-ctgttcacagca i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 67133 25 - 709587 tagtcttttataa-ctgttcacggca i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1167453 25 - 2246441 tagtcttttataa-ccgttcacagca i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1235472 26 + 48283576 taatctttcataacctaattgctgtg i otoGar3.GL873522 C 0 C 0 e mm10.chr13 65979384 6914 - 120421639 I e canFam3.chr4 37170079 847 + 88276631 I e proCoq1.NW_012152163v1 758448 6575 - 940639 I e dasNov3.JH562710 245691 6502 - 960158 I a score=1922573.000000 s hg38.chr5_KI270795v1_alt 55102 169 + 131892 gtgacttaccatcacttctgcagtatggtattagacacatagaccaatccta--gtgtaatgcaggaaggactatg------tatgagtgtgggggtggggatcactatggcccatcttggaggctggctacctcaccatttaatatctgattcatcttcaaatttctccaaatggc s panTro5.chr5 5305292 169 - 181907262 gtgacttaccgtcacttctgcagtatggtattagacacatagaccaacccta--gtgtaatgcaggaaggactatg------tatgagtgtgggggtggggatcactatggcccatcttggaggctggctacctcaCCATTTAATATCTGATTCATCttcaaatttctccaaatggc i panTro5.chr5 C 0 C 0 s panPan2.chr5 5567756 169 - 183735486 gtgacttaccgtcacttctgcagtatggtattagacacatagaccaatccta--gtgtaatgcaggaaggactatg------tatgagtgtgggggtggggatcactatggcccatcttggaggctggctacctcaCCATTTAATATCTGATTCATCttcaaatttctccaaatggc i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1697786 169 + 3967317 gtgacttaccatcacttctgcagtatggtattagacacatagaccaatccta--gtgtaatgcaggaaggactatg------tatgagtgtgggggtgaggatcactatggcccatcttggaggctggctacctcaccatttaatatctgattcatcttcaaatttctccaaatggc i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4574409 163 + 163208435 gtgacttaccatcacttctgcagtatggtgttaggcacatagaccaatccta--gtataatgcaggaaggactatg------tatgagtgtgg------ggatcactatggcccatcttggaggctggctacctcaccatctaatatctgactcatcttcaaatttctccaaatggc i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5754810 169 - 180051392 gtgacttaccatcacttctgcagtatggtattagacacatagaccaatccta--gtataatgcaggaaggactttg------tatgggtgtgggggtggggatcaccatggcccgtcttggaggctggctacctcaccatctaatatctggttcatcttcaaatttctccaaatggc i rheMac8.chr6 C 0 I 5 s macFas5.chr6 5941271 169 - 181584905 gtgacttaccatcacttctgcagtatggtattagacacatagaccaatccta--gtataatgcaggaaggactttg------tatgggtgtgggggtggggatcaccatggcccgtcttggaggctggctacctcaccatctaatatctggttcatcttcaaatttctccaaatggc i macFas5.chr6 C 0 I 5 s macNem1.NW_012018466v1 971644 169 - 16193990 gtgacttaccatcacttctgcagtatggtattagacacatagaccaatccta--gtataatgcaggaaggactttg------tatgggtgtgggggtggggatcaccatggcccgtcttggaggctggctacctcaccatctaatatctggttcatcttcaaatttctccaaatgGC i macNem1.NW_012018466v1 C 0 I 44 s cerAty1.NW_012007035v1 1792809 169 - 21434487 gtgacttaccatcacttctgcagtatggtattagacacatagaccaatccta--gtataatgcaggaaggactttg------tatgggtgtgggggtggggatcaccatggcccgtcttggaggctggctacctcaccatctaatatctggttcatcttcaaatttctccaaatggc i cerAty1.NW_012007035v1 C 0 I 8 s chlSab2.chr23 4755374 169 - 82825804 gtgacttaccatcacttctgcagtatggtattagacacatagaccaatccta--gtataatgcaggaaggactttg------tatgggtgtgggggtggggatcaccatggcccgtcttggaggctggctacctcaccatctaatatctagttcatcttcaaatttctccaagtggc i chlSab2.chr23 C 0 I 4 s manLeu1.NW_012103943v1 259927 169 + 2521317 gtgacttaccatcacttctgcagtatggtattagacacatagaccaatccta--gtataatgcaggaaggactttg------tgtgggtgtggggatggggatcaccgtggcccgtcttggaggctggctacctcaCCATCTAATATCTGGTTCATCTTCAAATTTCTCCAAATGGC i manLeu1.NW_012103943v1 C 0 I 9 s colAng1.NW_012115755v1 1742458 166 - 2415367 gtgacttaccgtcacttctgcagtatggtattagacacatagaccaatccta--gtataatgcaggaaggactttg------tatgggtgtgggggtggggatcac--tggcccgacttggaggctggctgcctcaCCATCTAATATCTGGTTCATCTTCAAATTTCTCCAAATGG- i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64086209 148 + 204313951 gtgacataccatcacttctgcagtaaggtattagatacatagactaatccta--gtataatgcagaagggactaca------tatgggtgtcggggtgggaatcactgtggcccatcttggaggctgcttatctcaccatctaatatctagttcat--------------------- i calJac3.chr2 C 0 I 6 s saiBol1.JH378186 2211867 165 + 10068113 gtgacataccatcacttccgcagtgaggtattagacacattgactaatccta--gtatcatgcaggagggactacg------tatggacgtgggggtgggaatcactgtggtccatcttggaggctggttatctcaccatctaatatctagatttt----aaatttctccaaatggc i saiBol1.JH378186 C 0 I 6 s cebCap1.NW_016107999v1 67158 169 - 709587 gtgacataccatcacttctgcagtaaggtgttagacacatagactaatccta--gtataatgcaggagggactacc------tatgggcgtgggggtgggaatcactgtggtccatcttggaggctggttacctcaCCATCTAATATCTAGTTCATCTTCAAAGTTCTCCAAATGGC i cebCap1.NW_016107999v1 C 0 I 6 s aotNan1.NW_018501968v1 1167478 169 - 2246441 gtgacataccatcacttctgcagtaaggtattagacacatagactaatccta--gtataatgcaggagggactacg------tatgggcgtgggggtgggaatcgctgtggcccatcttggaggctggttatctcaccatctaatatctagttcatcttcaaatttctccaaatgac i aotNan1.NW_018501968v1 C 0 I 6 s proCoq1.NW_012152163v1 765023 168 - 940639 gtgacataccatgacttctgcagtatggtgttagacgcataggccaaccctggaatacaatgcaggagggactacg------tgtgagtgtggatgtggggatcattgtggttcatctt---ggctggctacctcaTCATctagtatccaatctatattcagatttctccaaatggc i proCoq1.NW_012152163v1 I 6575 C 0 s otoGar3.GL873522 1235498 154 + 48283576 gtgacataccatcacttctgcagtaCGGCATTAGACACATAGACACAC------ATATAATACAGGTGTGGATATGAGGATATATAGGTGTGAATGTGGGGATCACTG-----------------TGGCTACCTCATCATCTAATATCTAATCTATATTCAGATTTGTCCAAATGGC i otoGar3.GL873522 C 0 C 0 e mm10.chr13 65979384 6914 - 120421639 I e canFam3.chr4 37170079 847 + 88276631 I e dasNov3.JH562710 245691 6502 - 960158 I a score=-71987.000000 s hg38.chr5_KI270795v1_alt 55271 34 + 131892 ----ctaaaaaaaaaaaaaaaaaa-----c--acagaa--aaaccaa s panTro5.chr5 5305461 30 - 181907262 ----ctaaaaaaaaaaaaaa---------c--acagaa--aaaccaa i panTro5.chr5 C 0 C 0 s panPan2.chr5 5567925 26 - 183735486 ----ctaaaaaaaaaa-------------c--acagaa--aaaccaa i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1697955 28 + 3967317 ----ctaaaaaaaaaaaa-----------c--acagaa--aaaccaa i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4574572 31 + 163208435 ----ctaaaaaacaaaacaaa--------c--aaacaa--acaaaaa i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5754984 30 - 180051392 ----caaacaaacaaaaaaa---------c--aaaaac--aaacaaa i rheMac8.chr6 I 5 I 5 s macFas5.chr6 5941445 30 - 181584905 ----caaacaaacaaaaaaa---------c--aaaaac--aaacaaa i macFas5.chr6 I 5 I 5 s cerAty1.NW_012007035v1 1792986 32 - 21434487 ----aaaacaaacaaaaaaa---------caaaaaaac--aaacaaa i cerAty1.NW_012007035v1 I 8 I 7 s chlSab2.chr23 4755547 23 - 82825804 -----aaaccaaaaaaaaaa---------c----------aacaaaa i chlSab2.chr23 I 4 C 0 s manLeu1.NW_012103943v1 260105 32 + 2521317 ----caaacaaacaaaaaaa---------c--aaaaacaaaaaaaaa i manLeu1.NW_012103943v1 I 9 C 0 s colAng1.NW_012115755v1 1742624 15 - 2415367 ----AAAAAAAACAAAACA---------------------------- i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64086363 15 + 204313951 ----aaaaaaaaggaaaca---------------------------- i calJac3.chr2 I 6 C 0 s saiBol1.JH378186 2212038 14 + 10068113 -----aaaaaaaggaaaca---------------------------- i saiBol1.JH378186 I 6 C 0 s cebCap1.NW_016107999v1 67333 15 - 709587 ----AAAAAAAAGGAAACA---------------------------- i cebCap1.NW_016107999v1 I 6 C 0 s aotNan1.NW_018501968v1 1167653 15 - 2246441 ----aaaaaaaaggaaaca---------------------------- i aotNan1.NW_018501968v1 I 6 C 0 s proCoq1.NW_012152163v1 765191 29 - 940639 ctaattagaaaacaaacaaacaaaaaaac------------------ i proCoq1.NW_012152163v1 C 0 C 0 s otoGar3.GL873522 1235652 11 + 48283576 CTAATTAAAAA------------------------------------ i otoGar3.GL873522 C 0 C 0 e mm10.chr13 65979384 6914 - 120421639 I e macNem1.NW_012018466v1 971813 44 - 16193990 I e canFam3.chr4 37170079 847 + 88276631 I e dasNov3.JH562710 245691 6502 - 960158 I a score=2549893.000000 s hg38.chr5_KI270795v1_alt 55305 220 + 131892 aaaccaggatccattgcatttggctgttgtatctctttggtctttctaatctatgacattggctttttgaaaaggccagtcttctagaacgtcccacagtctaggcttgctgattatttcctcacttgacttgttcctctatcccctgtatttcctatggattgaaagtttagtctacaggccttttaaattcaggttaaacatcctgccagggagat----at s panTro5.chr5 5305491 220 - 181907262 aaaccaggatccattgcatttggctgttgtatctctttggtctttctaatctatgacattggctttttgaaaaggccagtcttctagaacatcccacagtctaggcttgctgattatttcctcacttgacttgttcctctatcccctgtatttcctatggattgaaagtttagtctacaggccttttaaattcaggttaaacatcctgccaggaagat----at i panTro5.chr5 C 0 C 0 s panPan2.chr5 5567951 220 - 183735486 aaaccaggatccattgcatttggctgttgtatctctttggtctttctaatctatgacattggctttttgaaaaggccagtcttctagaacatcccacagtctaggcttgctgattatttcctcacttgacttgttcctctatcccctgtatttcctatggattgaaagtttagtctacaggccttttaaattcaggttaaacatcctgccaggaagat----at i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1697983 220 + 3967317 aaaccaggatccattgcatttggctgttgtatttctttggtctttctaatctatgacattggctttttgaaaaggccagtcttctagaacgtcccacagtctaggcttgctgattatttcctcacttgacttgttcctctatcccctgtatttcctatggattgaaagtttagtctacaggccttttaaattcaggttaaacatcctgccaggaagat----at i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4574603 220 + 163208435 aaaccaggatccattgcatttggctgttgtatctctttggtctttctaatatatgacattggctttttgaaaaggccagtcttctagaacgtcccacagtctaggcttgctgattatttcctcacttgacttgttcctctatcccctgtatttcctatggactgaaagtttagtctacaggccttttaaattcaggttaaacatcctgccaggaaggt----at i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5755019 218 - 180051392 aaaacaggatccattgcatttgtctgttgtatctctttggtctttctaatctatgacattagctttttgaaaaggccagtcttctagagcatcccacagtctaggcttgctgattatttccttgcttgacttgttcctctattccctgtatttcctatggattgaaagtttagtctacaggcctttcaaattcaggttaaacatcctgccaggaagat------ i rheMac8.chr6 I 5 C 0 s macFas5.chr6 5941480 218 - 181584905 aaaacaggatccattgcatttgtctgttgtatctctttggtctttctaatctatgacattagctttttgaaaaggccagtcttctagagcatcccacagtctaggcttgctgattatttccttgcttgacttgttcctctattccctgtatttcctatggattgaaagtttagtctacaggcctttcaaattcaggttaaacatcctgccaggaagat------ i macFas5.chr6 I 5 C 0 s macNem1.NW_012018466v1 971857 218 - 16193990 aaaACAGGATCCATTGCATTTGTCTGTTGTATCTCTTTGGTCTTTCTAATCTATGACATTAGCTTTTTGAAAAGGCCAgtcttctagagcatcccacagtctaggcttgctgattatttccttgcttgacttgttcctctattccctgtatttcctatggattgaaagtttagtctacaggcctttcaaattcaggttaaacatcctgccaggaagat------ i macNem1.NW_012018466v1 I 44 C 0 s cerAty1.NW_012007035v1 1793025 218 - 21434487 aaaacaggatccattgcatttgtctgttgtatctctttggtctttctaatctatgacattagctttttgaaaaggccagtcttctagagcatcccacagtctaggcttgctgattatttccttgcttgacttgttcctctattccctatatttcctatggattgaaagtttagtctacaggcctttcaaattcaggttaaacatcctgccaggaagat------ i cerAty1.NW_012007035v1 I 7 C 0 s chlSab2.chr23 4755570 219 - 82825804 aaaccaggatccattgcatttgcctg-tgtatctctttggtctttctaatctATGACATTAGCTTTTTGGAAAGGCCAgtcttctagagcatcccacagtctaggcttgcggattatttccttgcttgacttgttcctctatcccctgtatttcctatggattgaaagtttagtctacaggcctttcaaattcaggttAAACATCCTGCCAGGAAGATAT---- i chlSab2.chr23 C 0 I 9 s manLeu1.NW_012103943v1 260137 219 + 2521317 aaaacaggatccattgcatttgtctgttgtatctctttggtctttctaatctatgacattagctttttgaaaaggccagtcttctagagcatcccacagtctagg-ttgctgattatttccttgcttgacttgttcctctattccctgtatttcctatggattgaaagtttagtctacaggcctttcaaattcaggttaaacatcctgccaggaagatat---- i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1742639 220 - 2415367 aaaccaggatccattgcatttgtctgttgtatctctttggtctttctaatctatgacattagctttttgaaaaggccagtcttctagagcatcccacagtctaggcttgctgattatttccttgcttgacttgttcctctatcccctgtatttcctatggattgaaagtttagtctacaggcctttcaaattcaggttaaacatcctgccaggaagat--at-- i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64086378 217 + 204313951 aacccaagatccatcgcattttgctgttgtatctctttggtctttctaatttatgacattggcttttggaagaggccagtcttctagaatatcccacaatctaggcttgctgattatttcctcacttgacttgttcctgtatctcct-tatttcctatggattgattgtttagtctacaggccttttaaattcaagttaaatatcttcccaggaagaT------ i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2212052 219 + 10068113 aacccaagatccgtcgcatttggccgttgtatctctttggtctttctaatctatgacattggcttttggaagaggccagtcttctagaatatcccacaatctaggcttgctgattattttctcacttgacttgttcctgtatcccct-tatttcctatggatggattgtttagtctacaggccttttaaattcaggttaaacatcctcccaggaagat----at i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 67348 219 - 709587 AACCCAAGACCCATTACATTTGGCTGTTGTATCTATTTGgtctttctaatctatgacattggcttttggaagacgccagtcttctagaatatcccacaatctgggcttgctgattatttcctcacttgacttattcctgtatcccct-tatttcctgtggattgattgtttagtctacaggccttttaaattcaggttaaacatcctcccaggaagat----at i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1167668 219 - 2246441 aacccaagatccatcgcatttggctgttgtatctctttggtctttctaatctatgacattggcttttggaagaggccagtcttctagaatatcccacaatctaggcttgctgattatttcctcgcttgacttgttcctgtatcccct-tattttctatggattgattgtttagtctacgggccttttaaattcaggttaaacatcttcccaggaagat----at i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 765220 220 - 940639 aaaccaggatccattgcatttggctgttgtatctctttagtctttctaatctataacattgactttttgaagaggccagtcttctagaatatcccacagtctaggcttgctgactgtttcctcacctgacttgttcctctatccctggtaattcctgtggactaaaagtttagtctaaagacttatcaggttcaggttgagcattccggcaggaagat----at i proCoq1.NW_012152163v1 C 0 C 0 s otoGar3.GL873522 1235663 166 + 48283576 AAAACAGcatctgttgtatttggctattgtatctctttagtctttttaatctataatattgac-atttgaagaggccagtc-tctggaatatcctacaatctaggcttgctggttgtttcctcacttgacttgtt----------------------------------------------------agattcagcttaaacattctggcaggaagat----ac i otoGar3.GL873522 C 0 C 0 e mm10.chr13 65979384 6914 - 120421639 I e canFam3.chr4 37170079 847 + 88276631 I e dasNov3.JH562710 245691 6502 - 960158 I a score=152938.000000 s hg38.chr5_KI270795v1_alt 55525 17 + 131892 catagcc------aaagctatgt s panTro5.chr5 5305711 17 - 181907262 catagcc------aaagctatgt i panTro5.chr5 C 0 C 0 s panPan2.chr5 5568171 17 - 183735486 catagcc------aaagctatgt i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1698203 17 + 3967317 catagcc------aaagctatgt i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4574823 17 + 163208435 catagcc------aaagctatgt i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5755237 22 - 180051392 -atagccaaagttaaagttatgt i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5941698 22 - 181584905 -atagccaaagttaaagttatgt i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 972075 16 - 16193990 -atagcc------aaagttatgt i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1793243 16 - 21434487 -atagcc------aaagctatgt i cerAty1.NW_012007035v1 C 0 C 0 s manLeu1.NW_012103943v1 260356 14 + 2521317 ---agcc------aaagctatgt i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1742859 17 - 2415367 catagcc------aaagctatgt i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64086595 16 + 204313951 -ATAACC------AAAGCTATAT i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2212271 17 + 10068113 cataacc------aaagccatgt i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 67567 17 - 709587 cacaacc------aaagctatgt i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1167887 17 - 2246441 cataacc------aaagctatgt i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 765440 17 - 940639 catagct------gaagctgtgt i proCoq1.NW_012152163v1 C 0 C 0 s otoGar3.GL873522 1235829 17 + 48283576 catagtg------gaagctgtgt i otoGar3.GL873522 C 0 C 0 e mm10.chr13 65979384 6914 - 120421639 I e canFam3.chr4 37170079 847 + 88276631 I e dasNov3.JH562710 245691 6502 - 960158 I e chlSab2.chr23 4755789 9 - 82825804 I a score=2793898.000000 s hg38.chr5_KI270795v1_alt 55542 240 + 131892 acttcacccggaggcgtatGTCAGGAGGGATTGCTATTGGCGACGCTGTTTGATCATTTggttccaactgcttcttaaacagactttcaa------ccagactacctgctttaagtcccatcttcatgcctctttcagaggtatttggtgccttcaattcctgaggccttctggagacttgcagtgctaatcggccagcttctgagcttccccactagtagcctaggtttctgcttcctctggtct s panTro5.chr5 5305728 240 - 181907262 acttcacccggaggcatatgtcaggagggattgctattggcgatgctgtttgatcatttggttccaactgcttcttaaacagactttcaa------ccagactacctgctttaagccccatcttcacgcctctttcagaggtatttggtgccttcaattcctgaggccttctggagacttgcagtgctaatcggccagcttctgagcttccccaccagtagcctaggtttctgcttcctctggtct i panTro5.chr5 C 0 C 0 s panPan2.chr5 5568188 240 - 183735486 acttcacccggaggcatatgtcaggagggattgctattggcgatgctgtttgatcatttggttccaactgcttcttaaacagactttcaa------ccagactacctgctttaagccccatcttcacgcctctttcagaggtatttggtgccttcaattcctgaggccttctggagacttgcagtgctaatcggccagcttctgagcttccccaccagtagcctaggtttctgcttcctctggtct i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1698220 239 + 3967317 acttcacccggaggcatatGTCAGGA-GGATTGCTATTGGCGATGCTGTTTGATCATTTGATtccaacagcttcttaaacagactttcaa------ccagactacctgctttaagccccatcttcacgcctctttcagaggtacttggtgccttcaattcctgaggccttctggagacttgcagtgctaatcggccagcttctgagcttccccaccagcagcccaggtttctgcttcctctggtct i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4574840 240 + 163208435 acttcACCCAGAGGCATATGTCAGGAGGGATTGCTATTGGTGATGCTGTTTGATCATTTGATtccaactgcttcttaaacagactttcaa------ccagactacctgctttaagccccatcttcacgcccctttcagaggtacttggtgccttcaattcctgaggccttctggagacttgcagtgctaatcagccagcttctgagcttccccaccggtagcctaggtttctgcttcctctggtct i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5755259 238 - 180051392 acttcacccggaggcatatgtcaggagggattgctattggtgatgctgtttgatcatttgattccaactgcttcttaa--agactttcaa------ccagactacctgctttaagccccatcttcatgtctctttcagagatacttggtgccttcaattcccgagggtttctggagacttgcagtgctaatcggccagcttctgagcttctccaccagtagcctaggtttctgcttcctttggtct i rheMac8.chr6 C 0 I 2 s macFas5.chr6 5941720 238 - 181584905 acttcacccggaggcatatGTCAGGAGGGATTGCTATTGGTGATGCTGTTTGATCATTTGATtccaactgcttcttaa--agactttcaa------ccagactacctgctttaagccccatcttcatgtctctttcagagatacttggtgccttcaattcccgagggtttctggagacttgcagtgctaatcggccagcttctgagcttccccaccagtagcctaggtttctgcttcctctggtct i macFas5.chr6 C 0 I 2 s macNem1.NW_012018466v1 972091 238 - 16193990 acttcacccggaggcatatgtcaggagggattgctattggtgatgctGTTTGATCATTTGATtccaactgcttcttaa--agactttcaa------ccagactacctgctttaagccccatcttcatgtctctttcagagatacttggtgccttcaattcccgagggtttctggagacttgcagtgctaatcggccagcttctgagcttccccaccagtagcctaggtttctgcttcctctggtct i macNem1.NW_012018466v1 C 0 I 2 s cerAty1.NW_012007035v1 1793259 240 - 21434487 actttacccggaggcatatgtcaggagggattgctattggtgatgctgtttgatcaTTTAATtccaactgcttcttaaacagactttcaa------ccagactacctgctttaagccccatcttcatgtctctttcagagatacttggtgccttcaattcccgagggtttctggagacttgcagtgctaatcggccagcttctgagcttccccaccagtagcctaggtttctgcttcctctggtct i cerAty1.NW_012007035v1 C 0 I 2 s chlSab2.chr23 4755798 240 - 82825804 ACTTCGCCCGGAGGCATATGTCGGGAGGGACTGCTATTGGTGATGCTGTTTGATCATTTGATtccaactgcttcttaaacagactttcaa------ccagactacctgctttaagccccatcttcatgtctctttcagagatacttggtgccttcaattcccgagggtttctggagacttgcagtgctaatcggccagcttccgagcttccccaccagtagcctaggtttctgcttcctctggtct i chlSab2.chr23 I 9 I 2 s manLeu1.NW_012103943v1 260370 240 + 2521317 acttcacccggaggcatatgtcaggagggattgctattggtgatgctgtttgatcaTTTAATtccaactgcttcttaaacagactttcga------ccagactacctgctttaagccccatcttcatgtctctttcagagatacttggtgcctgcaattcccgagggtttctggagacttgcagtgctaatcggccagcttctgagcttccccaccagtagcctaggtttctgcttcctctggtct i manLeu1.NW_012103943v1 C 0 I 1118 s colAng1.NW_012115755v1 1742876 240 - 2415367 acttcacccggaggcatatgtcgggagggattgctattggtgatgctgtttgatcatttgattccaattgcttcttaaacagactttcaa------ccagactacctgctttaagccccatcttcacgtctctttcagagatacttggtgccttcaattcctgaggctttctagagacttgcagtgttaatcggccagcttctgagcttccccaccagtagcctaggtttctgcttcctctggtct i colAng1.NW_012115755v1 C 0 I 2 s calJac3.chr2 64086611 240 + 204313951 ACTTCACCCAGAGGCGTAATTCAGGAGGAATTGCTCCTGGTAATGCTCTTTGATCATTTGATtccaagtgcttcttaaacagactttcaa------ccagactacctgccttaagccccatcttcatgcctttttcagaggtacttggtgccttcaattcctgagcctttctgaagtcttacagtgctaattggccggcttttgagcttctccgctattagcctaggtttctgcttcctctgttct i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2212288 225 + 10068113 acttcACCCGGAGGCATAAGTCAGGAGGGATTGCTACTGGTGATGCTGTTTGATCATTTGATtccaactgctttttaaacatactttcaa------ccagactacctgcc-taagccccatcttcacgcctctttcagag--------------caattcctgagcctttctgaagtcttacagtgctaattggccggcttctgagcttccccactattagcctagctttctgcttcttcctgtct i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 67584 240 - 709587 acttcACCCGGAGGCGTAAGTCAGGAGGGATTGCTGCTGGTGATGCTGTTTGATCATTTGATtccaactgcttcttaaacagactttcag------ccagactacctgctttaagccccattttcacgcctctttcagaggtacttggtaccttcaattcctaagcctttctgaagtcttacggtgctaattggccagcttctgagcttccccactattagcctgggtttctgcttcctctgctct i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1167904 240 - 2246441 acttcACCCGGAGGCATAAGTCAGGAGGGATTGCTACTGGTGATGCTGTTTGATCATTTGATtccaagtgcttcttaaacagactttcaa------ccagactacctgccttaagccccatcttcacgcctttttcagaggtacttggtgccttcaattcctgagcctttctgaagtcttacagtgctaattgactggcttctgagcttccccgctattagcctaggtttctccttcctctggtcc i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 765457 239 - 940639 acttcacctggaggcacatgtcaggaggtcttgtta-tgctgatgccatctgatcacttggttccaaccgcttctcggaagggcttccag------ccagtccaccagctgtaagccccatcttcatgctccttgctgaggcgcttggtgccttcaatccctgagcctttctggagacttacagtgctaactggccagcttctgggcttcctcactacttgcctgggtttctgcttcctctggtct i proCoq1.NW_012152163v1 C 0 C 0 s otoGar3.GL873522 1235846 212 + 48283576 acttcacctggaggcacatgtcaggaggtcttgtta-ggttgatgccatctgatcac-tgattccaactgctttttaagccggcttccaaccagtcccagtccacctgctttaagacccagctccacctcccttccagaggtactttgtgcctt-----ctcaaatctttatggagacttatactgcttactggccaggttctga---------------------------gcttcctctggtct i otoGar3.GL873522 C 0 C 0 e mm10.chr13 65979384 6914 - 120421639 I e canFam3.chr4 37170079 847 + 88276631 I e dasNov3.JH562710 245691 6502 - 960158 I a score=853279.000000 s hg38.chr5_KI270795v1_alt 55782 67 + 131892 gctaaaacagttattatccatctagtttcattagttttgttgctctcatctcctcttctCACTGGAA s panTro5.chr5 5305968 67 - 181907262 gctaaaacagttattatccatctagtttcattagttttgttgctctcatctcctcttctCACTGGAA i panTro5.chr5 C 0 C 0 s panPan2.chr5 5568428 67 - 183735486 gctaaaacagttattatccatctagtttcattagttttgttgctctcatctcctcttctCACTGGAA i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1698459 67 + 3967317 gctaaaacagttattatccatctagtttcattagttttgttgctctcatctcctcttctCACTGGAA i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4575080 67 + 163208435 gctaaaacagttattatccatctagtttcattagttttgttgctctcatctcctcttctCACTGGAA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5755499 67 - 180051392 gctaaaacagttattatccatctagtttcattagttttgttgctctcatcacctcttctCACTGGGA i rheMac8.chr6 I 2 C 0 s macFas5.chr6 5941960 67 - 181584905 gctaaaacagttattatccatctagtttcattagttttgttgctctcatcacctcttctCACTGGGA i macFas5.chr6 I 2 C 0 s macNem1.NW_012018466v1 972331 67 - 16193990 gctaaaacagttattatccatctagtttcattagttttgttgctctcatcacctcttctCACTGGGA i macNem1.NW_012018466v1 I 2 C 0 s cerAty1.NW_012007035v1 1793501 67 - 21434487 gctaaaacagttattatccatctagtttcattagttttgttgctctcatctcctcttctCACTGGGA i cerAty1.NW_012007035v1 I 2 C 0 s chlSab2.chr23 4756040 67 - 82825804 gctaaaacagttattatccatctagtttcattagttttgttgctctcatctcctcttctCACTGGGA i chlSab2.chr23 I 2 C 0 s manLeu1.NW_012103943v1 261728 67 + 2521317 gctaaaacagttattatccatctagtttcattagttttgttgctctcatctcctcttctCACTGGGA i manLeu1.NW_012103943v1 I 1118 C 0 s colAng1.NW_012115755v1 1743118 67 - 2415367 gctaaaacagttattatccatctagttttattagttttgttgctctcatctcctcttctCACTGGGA i colAng1.NW_012115755v1 I 2 C 0 s calJac3.chr2 64086851 67 + 204313951 aataaaacagttattatccatcgagtttcattagttttgttgctcttatcacctcttctCACTGGGA i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2212513 67 + 10068113 gataaaacagttattatccatctagtttcattagctttgttgctctcatcacctcttctCACTGGGA i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 67824 67 - 709587 gataaaacagttattatccatctagtttcattagttttgttgctctcatcacctcttctCACTGGGA i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1168144 67 - 2246441 gataaaacagttattatccatctagtttcattagttttgttgctctcatcacctcttctCACTGGGA i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 765696 66 - 940639 gct-aaacagttattatccatccagtttcattaattctgttgctcctatctcctttcctAGCTAGGA i proCoq1.NW_012152163v1 C 0 C 0 s otoGar3.GL873522 1236058 67 + 48283576 gctgagacagttattatccatccagttccatgaattttgttgttcttatatcctttgctAGCTAGGA i otoGar3.GL873522 C 0 C 0 e mm10.chr13 65979384 6914 - 120421639 I e canFam3.chr4 37170079 847 + 88276631 I e dasNov3.JH562710 245691 6502 - 960158 I a score=570662.000000 s hg38.chr5_KI270795v1_alt 55849 47 + 131892 CCCTCTGAATACCTCCTCTAGGCATC-TGTTCAGCTATGACTACATGG s panTro5.chr5 5306035 47 - 181907262 CCCTCTGAATACCTCCTCTAGGCATC-TGTTCAGCTATGACTACATGG i panTro5.chr5 C 0 C 0 s panPan2.chr5 5568495 47 - 183735486 CCCTCTGAATACCTCCTCTAGGCATC-TGTTCAGCTATGACTACATGG i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1698526 47 + 3967317 CCCTCTGAATACCTCCTCTAGGCATC-TGTTCAGCTATGACTACATGG i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4575147 47 + 163208435 CCCTCTGAATACCACCTCTAGACATC-TGTTCAGCTATGACTACATGG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5755566 46 - 180051392 CACTCTGAATACCTCCTCTAGGCATC-TGTTCAGCTATGACTAC-TGG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5942027 46 - 181584905 CACTCTGAATACCTCCTCTAGGCATC-TGTTCAGCTATGACTAC-TGG i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 972398 46 - 16193990 CACTCTGAATACCTCCTCTAGGCATC-TGTTCAGCTATGACTAC-TGG i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1793568 47 - 21434487 CACTCTGAATACCTCCTCTAGGCATC-TGTTCAGCTATGACTACGTGG i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4756107 47 - 82825804 CACTCTGAATACCTCCTCTAGGCATC-TGTTCAGCTATGACTACATGG i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 261795 47 + 2521317 CACTCTGAATACCTCCTCTAGGCATC-TGTTCAGCTATGACTACGTGG i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1743185 47 - 2415367 CACTCTGAATACCTCCTCTAGGCATC-TGTTCAGCTATGACTACATGG i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64086918 47 + 204313951 CACTCTGAATACCTCATCTAGGCATC-TGTTCAGTTATGACTGTGTGG i calJac3.chr2 C 0 I 303 s saiBol1.JH378186 2212580 47 + 10068113 CACTCTGAACACCTCATCTAGGCATC-TGTTCAGATATGACTACGTGG i saiBol1.JH378186 C 0 I 307 s cebCap1.NW_016107999v1 67891 47 - 709587 CACTCTGAATACCTCATCTAGGCATC-TGTTCAGATATGACTACGTGG i cebCap1.NW_016107999v1 C 0 I 307 s aotNan1.NW_018501968v1 1168211 47 - 2246441 CACTCTGAATACCTCATCTAGGCATC-TGTTCAGATATGACTACGTGG i aotNan1.NW_018501968v1 C 0 I 307 s proCoq1.NW_012152163v1 765762 47 - 940639 TACTCCGAACAGCTTCTTTAGGCATA-TTTTCATATGTGACTACATGG i proCoq1.NW_012152163v1 C 0 C 0 s otoGar3.GL873522 1236125 47 + 48283576 TAGTCCAAATAGCTTCTTTAGGCATC-TTTTCGTATGTGACTGCATGG i otoGar3.GL873522 C 0 C 0 s dasNov3.JH562710 252193 46 - 960158 CCATCTGAATAACTTCTTTAGGGATCATTTTCAAATATGACTACTT-- i dasNov3.JH562710 I 6502 C 0 e mm10.chr13 65979384 6914 - 120421639 I e canFam3.chr4 37170079 847 + 88276631 I a score=1416625.000000 s hg38.chr5_KI270795v1_alt 55896 125 + 131892 TTCAAATATTTTAAAGAAAGCTGCCTTTGGTTATATATCTTTTCATAGTTCCTGTTTAGAGATCACTGTCCTTTGGTTTTGTCCCAAACCA-AACAAAACCCACATGTTGACTCTCATTTTGATGA s panTro5.chr5 5306082 125 - 181907262 TTCAAATATTTTAAAGAAAGCTGCCTTTGGTTATATATCTTTTCATAGCTCCTGTTTAGAGATCACTGTCCTTTGGTTTTGTCCCAAACCA-AACAAAACCCACATGTTGACTCTCATTTTGATGA i panTro5.chr5 C 0 C 0 s panPan2.chr5 5568542 125 - 183735486 TTCAAATATTTTAAAGAAAGCTGCCTTTGGTTATATATCTTTTCATAGTTCCTGTTTAGAGATCACTGTCCTTTGGTTTTGTCCCAAACCA-AACAAAACCCACATGTTGACTCTCATTTTGATGA i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1698573 125 + 3967317 TTCAAATATTTTAAAGAAAGCTGCCTTTGGTTATATATCTTTTCATAGTTCCTGTTTAGAGATCACTGTCCTTTGGTTTTGTCCCAAACCA-AACAAAACCCACATGTTGACTCTCATTTTGATGA i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4575194 125 + 163208435 TTCAAATATTTTAGAGAAAGCTGCCTTTGGTTATATATCTTTTCATAGTCCCTGTTTAGAGATCACTGTCTTCTGGTTTTGTCCCAAACCA-AACAAAACCCACTTGTTGACTCTCCTTTCGATGA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5755612 125 - 180051392 TTCAAATATTTTAAAGAAAGCTGCCTTTGGTTATATATCTTTTCATAGTTCCTGTTTAGAGATCACTGTCCTTTGGTTTTGTCCCAAACCG-AACAAAACCCACATGTTGACTCCCATTTGGATGA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5942073 125 - 181584905 TTCAAATATTTTAAAGAAAGCTGCCTTTGGTTATATATCTTTTCATAGTTCCTGTTTAGAGATCACTGTCCTTTGGTTTTGTCCCAAACCG-AACAAAACCCACATGTTGACTCCCATTTGGATGA i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 972444 125 - 16193990 TTCAAATATTTTAAAGAAAGCTGCCTTTGGTTATATATCTTTTCGTAGTTCCTGTTTAGAGATCACTGTCCTTTGGTTTTGTCCCAAACCG-AACAAAACCCACATGTTGACTCCCATTTGGCTGA i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1793615 125 - 21434487 TTCAAATATTTTAAAGAAAGCTGCCTTTGGTTATATATCTTTTCATAGTTCCTGTTTAGAGATCACTGTCCTTTGGTTTTGTCCCAAACCG-AACAAAACCCACATGTTGACTCTCATTTGGATGA i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4756154 125 - 82825804 TTCAAATATTTTAAGGAAAGCTGCCTTTGGTTATATATCTTTTCATAGTTCCTGTTTAGAGATCACGGTCCTTTGGTTTTGTCCCAACCCG-AACAAAACCCACATGTTGACTCTCATTTGGATGA i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 261842 125 + 2521317 TTCAAATATTTTAAAGAAAGCTGCCTTTGGTTATATATCTTTTCATAGTTCCTGTTTAGAGATCACTGTCCTTTGGTTTTGTCCCAAACCG-AACAAAACCCACATGTTGACTCTCATTTGGATGA i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1743232 125 - 2415367 TTCAAATATTTTAAAGAAAGCTGCCTTTGGTTATATATCTTTTCATAGTTGCTGTTTAGAGGTCACTGTCCTTTGGTTTTGTCCCAAACCG-AACAAAACCCACATGTTGACTCTCATTTGGATGA i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64087268 124 + 204313951 TTCAAATATTTGAAAGAAAGCTACC-TTGTTTATATATCTTTTTATAGTTCCTGTATAGAGATCACTGCCCTTTGGTTTTGTCCCAAACCA-GACAAAACCTGCATGTTGACTCTCATTTCGATGA i calJac3.chr2 I 303 C 0 s saiBol1.JH378186 2212934 124 + 10068113 TTCAAATATTTGAAAGAAAGCTGCC-TTGGTTATATATCTTTTCATAGTTTCTACTTAGAGATCACTGTCCTTTGGTTTTGTCCCAAACCA-AACAAAACCCGCATGTTGACTCTCATTCCGCTGG i saiBol1.JH378186 I 307 C 0 s cebCap1.NW_016107999v1 68245 124 - 709587 TTCAAATATTTGAAAGAAAGCTGCC-TTGGTTATATATCTTTTCATAGTTCCTGTTTAGAGGTCACTGTCCTTTGGTTTTGTCCCAAACCA-AACAAAACCCGCGTGTTGACTCTCATTTTGATGA i cebCap1.NW_016107999v1 I 307 C 0 s aotNan1.NW_018501968v1 1168565 123 - 2246441 TTCAAATATTTGAAAGAAAGCTGCC-TTGGTTATATATCTTTTCATAGTTCCTGTTTAGAGATCACTGTCCTTTGG-TTTGTCCCAAACCA-AACAAAACCTGCATGTTGACTCTCATTTCGATGA i aotNan1.NW_018501968v1 I 307 C 0 s proCoq1.NW_012152163v1 765809 103 - 940639 CTCAGATATTTTTGAGAAAGCTGCCTTAGGTCCTATAGCTTTTCAGAGATCCTGTTTAGAA----------------------TCAAACCA-AACAAAAACCCCATGTTGACTCCCATTTCTATGA i proCoq1.NW_012152163v1 C 0 C 0 s otoGar3.GL873522 1236172 103 + 48283576 CTCAGATATTTTTAAGAAAGCTGCATTTGGTCCTATAGATTTTTAGAGGTCCTGTTTAGAA----------------------TCAAACTA-AACAAAAACCTCATGTTGACCAATGTTTCTATGA i otoGar3.GL873522 C 0 C 0 s dasNov3.JH562710 252239 58 - 960158 ------------------AGCTGCCTTTG------------------GACCCTGTTCAGGAG----------------------CAAACAATGACAAAA----------AATTCTCATTTCTGTAA i dasNov3.JH562710 C 0 C 0 e mm10.chr13 65979384 6914 - 120421639 I e canFam3.chr4 37170079 847 + 88276631 I a score=117158.000000 s hg38.chr5_KI270795v1_alt 56021 10 + 131892 ACTCCATGGG s panTro5.chr5 5306207 10 - 181907262 ACTCCATGGG i panTro5.chr5 C 0 C 0 s panPan2.chr5 5568667 10 - 183735486 ACTTCATGGG i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1698698 9 + 3967317 ACTCCAT-GG i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4575319 10 + 163208435 ACTCCGTGGA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5755737 10 - 180051392 ACTCCATGGG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5942198 10 - 181584905 ACTCCATGGG i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 972569 10 - 16193990 ACTCCATGGG i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1793740 10 - 21434487 ACTCCGTGGG i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4756279 10 - 82825804 ACTCCATGGG i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 261967 10 + 2521317 ACTCCATAGG i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1743357 10 - 2415367 ACTCCATGGG i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64087392 10 + 204313951 ACTCTGTGGG i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2213058 10 + 10068113 CCTCTGTGGG i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 68369 10 - 709587 ACTCTGTGGG i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1168688 10 - 2246441 ACCCTGTGGG i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 765912 10 - 940639 ACTCTGCAGT i proCoq1.NW_012152163v1 C 0 C 0 s otoGar3.GL873522 1236275 10 + 48283576 ACTCTACAGT i otoGar3.GL873522 C 0 I 306 s mm10.chr13 65986298 10 - 120421639 aCTCTGTGGA i mm10.chr13 I 6914 C 0 s dasNov3.JH562710 252297 10 - 960158 ACTCTGTGGG i dasNov3.JH562710 C 0 C 0 e canFam3.chr4 37170079 847 + 88276631 I a score=1007242.000000 s hg38.chr5_KI270795v1_alt 56031 68 + 131892 GTGGCCCTCATTCTTGGGTCAGGGTAGCAGTTTCCAGATTCACTTACTAAGATCTACAAAGGATTAGT s panTro5.chr5 5306217 68 - 181907262 GTGGCCCTCATTCTTGGGTCAGGGTAGCATTTTCCAGATTCACTTACTAAGATCTACAAAGGATTAGT i panTro5.chr5 C 0 C 0 s panPan2.chr5 5568677 68 - 183735486 GTGGCCCTCATTCTTGGGTCAGGGTAGCATTTTCCAGATTCACTTACTAAGATCTACAAAGGATTAGT i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1698707 68 + 3967317 GTGGCCCTCATTCTTGGGTCAGGGTAGCATTTTCCAGATTCACTTACTAAGATCTACAAAGGATTAGT i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4575329 68 + 163208435 GTGGCCCTCATTCTTGGGTCAGGGTAGCATTTTCCAGATTGACTCACTAAGATCTACAAAGGATTAGT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5755747 68 - 180051392 GTGGCCCTCATTCTTGGGTCAGGGTAGCATTTTCCAGATTCACTTACTAAGATCTACAAAGGATTAGT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5942208 68 - 181584905 GTGGCCCTCATTCTTGGGTCAGGGTAGCATTTTCCAGATTCACTTACTAAGATCTACAAAGGATTAGT i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 972579 68 - 16193990 GTGGCCCTCATTCTTGGGTCAGGGTAGCATTTTCCAGATTCACTTACTAAGATCTACAAAGGATTAGT i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1793750 68 - 21434487 GTGGCCTTCATTCTTGGGTCAGGGTAGCATTTTCCAGATTCACTTACTAAGATCTACAAAGGATTAGT i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4756289 68 - 82825804 GTGGCCCTCATTCTTGGGTCAGGGTAGCATTTTCCAGATTCACTTACTAAGATCTACAAAGGATTAGT i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 261977 68 + 2521317 GTGGCCCTCATTCTTGGGTCAGGGTAGCATTTTCCAGATTCACTTACTAAGATCTACAAAGGATTAGT i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1743367 68 - 2415367 GTGGCCCTCATTCTTGGGTCAGGGTAGCACTTTCCAGATTCACTTACTAAGATCTACAAAGGATTAGT i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64087402 68 + 204313951 GTGGCACTCATTTTTGGGTCAGGGTAGCATTTTCCAGATTCACTTACTGAGATCGACAAAGGATTAGT i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2213068 68 + 10068113 GTGGCCCTCATTTTTGGGTCAGGGTAGCATTTTCCAGATTCACTTACTAAGATCTCCAAAGGATCAGT i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 68379 68 - 709587 GTGGCCCTCATTTTTGGGTCAGGGCAGCATTTTCCAGATTCACTTACTAGGATCTACAAAGGATCAGT i cebCap1.NW_016107999v1 C 0 I 5 s aotNan1.NW_018501968v1 1168698 68 - 2246441 GTGGCCCTCATTTTTGGGTCAGGGTAGCATTTTCCAGATTCACTTACTAAGATCTACAAAGGATTAGT i aotNan1.NW_018501968v1 C 0 I 5 s proCoq1.NW_012152163v1 765922 68 - 940639 GTATCTCTTTTTCTTTGGTCAGGGTAGCATTTTCCAGATTCATTTACTAAGGTCTACAAAGGATTAGT i proCoq1.NW_012152163v1 C 0 C 0 s otoGar3.GL873522 1236591 68 + 48283576 GTGGCTCTTTTTCTTTGGTCAGGGTAGCACTTTCCAGATTCATTTACTAAAATCTATAAAGGATTAGT i otoGar3.GL873522 I 306 C 0 s mm10.chr13 65986308 59 - 120421639 TTGGCTCTCATTCCTTAGTCGGGGTAGTGCCCCCT-------CCCACTA--TTTAACAAAGGATTATC i mm10.chr13 C 0 C 0 s dasNov3.JH562710 252307 68 - 960158 GTGGCTGTCCCTCTTGAGTTAGGATGGCATTTTTCAGATTCATTAACTAAGACCGACAAAGGGTTAGT i dasNov3.JH562710 C 0 C 0 e canFam3.chr4 37170079 847 + 88276631 I a score=50040.000000 s hg38.chr5_KI270795v1_alt 56099 5 + 131892 Aagta s panTro5.chr5 5306285 5 - 181907262 Aagca i panTro5.chr5 C 0 C 0 s panPan2.chr5 5568745 5 - 183735486 Aagta i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1698775 5 + 3967317 AAGTa i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4575397 5 + 163208435 Aaata i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5755815 5 - 180051392 Aaata i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5942276 5 - 181584905 Aaata i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 972647 5 - 16193990 Aaata i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1793818 5 - 21434487 Aaata i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4756357 5 - 82825804 Aaata i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 262045 5 + 2521317 Aaata i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1743435 5 - 2415367 Aaata i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64087470 5 + 204313951 GAATA i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2213136 5 + 10068113 GAATA i saiBol1.JH378186 C 0 C 0 s proCoq1.NW_012152163v1 765990 5 - 940639 Gaata i proCoq1.NW_012152163v1 C 0 C 0 s otoGar3.GL873522 1236659 5 + 48283576 Gaata i otoGar3.GL873522 C 0 C 0 s mm10.chr13 65986367 5 - 120421639 GAATA i mm10.chr13 C 0 C 0 s dasNov3.JH562710 252375 5 - 960158 GAATG i dasNov3.JH562710 C 0 C 0 e cebCap1.NW_016107999v1 68447 5 - 709587 I e canFam3.chr4 37170079 847 + 88276631 I e aotNan1.NW_018501968v1 1168766 5 - 2246441 I a score=2790265.000000 s hg38.chr5_KI270795v1_alt 56104 355 + 131892 gccctgtgaggaaggaatttgaggctccattttagagatgcagaaatggataaggtcaagtctcaatgtcagtacatggcagaatccagatttggaacaagatctgcttgcctcaaagtctttgcACCAGAGTGTAGTTGCAGTG-AATATCACTTTAAATAAATGGAAGCCACTTATTAGA---------------------------------------------------------------GGTGT------TAATCTCTCTCCAGGTAAcaggaatttatgattgagccatgaatttgtgtcttactaactttgtgctcttggatgag----------------------tttctttgcc------------tcttggagccttag-ttttttcaactatgatgtgag-ttgatagtacgtaactcacagaggtttctt-atgggctaaagaagatg-- s panTro5.chr5 5306290 355 - 181907262 gccctgtgaggaaggaatttgaggctccattttagagatgcagaaatggataaggtcaagtctcaacgtcagtacatggcagaatccagatttggaacaagatctgcttgcctcaaagtctttgcACCAGAGCGTAGTTGCAGTG-AATATCACTTTAAATAAATGGAAGCCACTTATTAGA---------------------------------------------------------------GGTGT------TAATCTCTCTCCAGGTAAcaggaatttatgattgagccatgaatttgtgtcttactaactttgtgctcttggatgag----------------------cttctttgcc------------tcttggagccttag-ttttttcaactatgatgtgag-ttgatagtacgtaactcacagaggtttctt-atgggctaaagaagatg-- i panTro5.chr5 C 0 C 0 s panPan2.chr5 5568750 355 - 183735486 gccctgtgaggaaggaatttgaggctccattttagagatgcagaaatggataaggtcaagtctcaacgtcagtacatggcagaatccagatttggaacaagatctgcttgcctcaaagtctttgcACCAGAGCGTAGTTGCAGTG-AATATCACTTTAAATAAATGGAAGCCACTTATTAGA---------------------------------------------------------------GGTGT------TAATCTCTCTCCAGGTAAcaggaatttatgattgagccatgaatttgtgtcttactaactttgtgctcttggatgag----------------------cttctttgcc------------tcttggagccttag-ttttttcaactatgatgtgag-ttgatagtacgtaactcacagaggtttctt-atgggctaaagaagatg-- i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1698780 355 + 3967317 gccctgtgaggaaggaacttgaggctccattttagagatgcagaaatggataaggtcaagtctcaacatcagtacatggcagaatccagatttgaaacaagatctgcttgcctcaaagtctttgcACCAGAGTGTAGTTGCAGTG-AATATCACTTTAAATAAATGGAAGCCACTTATTAGA---------------------------------------------------------------GGTGT------TAATCTCTCTCCAGGTAACAGGAATTTATGAttgagccatgaatttgtgtcttactaactttgtgctcttggatgag----------------------tttctttgcc------------tcttgtagccttag-ttttttcacctatgatgtgaa-ttgatagtatgtaactcacagaggtttctt-acgggctaaagaagatg-- i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4575402 353 + 163208435 gccctgtgaggaaggaattttaggctccattttagagatgcagaaatggataaggtaaagtctcaatgtcagtacatggcagaatccagatttgaaacaagatctgcttgactcaaagtctttgcACCAGAGTATAGTTGCAGTG-AATATCACTTTAAATAAATGGAAGCCACTTATTAGA---------------------------------------------------------------GGTGT------TAATCTCTCTCCGGGTAAcaggaatttatgattgagccatgaatttgtgtcttactaactttgtgctcttggatgag----------------------tttctttgcc------------tcttggagccttac-ttttttcacctatgatgtagg-ttgatagtacgtaactcacagaggtttctt-atgggctaaagaaga---- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5755820 353 - 180051392 ggcctgtgaagaaggaattttaggctccattttagagatgcagaaatggataaggtgaagtctcaacgtcagtacatggcagaatccagattggaaacaagatctgcttgactcaaagtctttgcACCAGAGTGTAGTTGCAGTG-AATATCACTTCAAATAAATGGAAGCCATTTATCAGA---------------------------------------------------------------GGTGT------TAATCTCTCTCCGGGTAAcaggcatttacgattgagccatgagtttgtgtcttattaactttgtgctcttggatgag----------------------tttctttgcc------------tcttggagccttcc-ttttttcacctatgatgtggg-ttgatagcacgtaactcacagaggtttctt-atgggctacagaaga---- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5942281 353 - 181584905 ggcctgtgaagaaggaattttaggctccattttagagatgcagaaatggataaggtgaagtctcaacgtcagtacatggcagaatccagattggaaacaaggtctgcttgactcaaagtctttgcACCAGAGTGTAGTTGCAGTG-AATATCACTTCAAATAAATGGAAGCCATTTATCAGA---------------------------------------------------------------GGTGT------TAATCTCTCTCCGGGTAAcaggcatttacgattgagccatgagtttgtgtcttattaactttgtgctcttggatgag----------------------tttctttgcc------------tcttggagccttcc-ttttttcacctatgatgtggg-ttgatagtacgtaactcacagaggtttctt-atgggctacagaaga---- i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 972652 351 - 16193990 ggcctgtgaagaaggaattttaggctccattttagagatgcagaaatggataaggtgaagtctcaacgtcagtacatggcagaatccagattggaaacaagatctgcttgactc--AGTCTTTGCACCAGAGTGTAGTTGCAGTG-AATATCACTTCAAATAAATGGAAGCCATTTATCAGA---------------------------------------------------------------GGTGT------TAATCTCTCTCCGGGTAAcaggcatttacgattgagccatgagtttgtgtcttattaactttgtgctcttggatgag----------------------tttctttgcc------------tcttggagccttcc-ttttttcacctatgatgtggg-ttgatagtacgtaactcacagaggtttctt-atgggctacagaaga---- i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1793823 353 - 21434487 ggcctgtgaggaaagagttttaggctccattttagagatgcggaaatggataaggtaaagtctcaacgtcagtacatggcagaatccagattggaaacaagatctgcttgactcaaagtctttgcACCAGAGTGTGGTTGCAGTG-AATATCACTTCAAATAAATGGAAGCCATTTATCAGA---------------------------------------------------------------GGTGT------TAATCTCTCTCCGGGTAAcaggcatttacgattgagccatgagtttgtgtcttattaactttgtgctcttggatgag----------------------tttctttgcc------------tcttggagccttcc-ttttttcacctatgatgtggg-ttgatagtacgtaactcacagaggtttctt-atgggctaaagaaga---- i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4756362 353 - 82825804 ggcctgtgaggaaggaattttaggctccattttagagatgcagaaatggataaggtaaagtctcaacgtcagtacatggcagaatccagattggaaacaagatctgcttgactcaaagtctttgcACCAGAGTGCAGTTGCAGTG-AATATCACTTCAAATAAATGGAAGCCATTTATCAGA---------------------------------------------------------------GGTGT------TAATCTCTCTCCGGGTAAcaggaatttatgattgagccatgagtttgtgtcttattaactttgtgctcttggatgag----------------------tttctttgcc------------tcttggagccttcc-ttttttcacctatgatgtggg-ttgatagtacgtaactcacagaggtttctt-atgggctaaagaaga---- i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 262050 353 + 2521317 ggcctgtgaggaaagagttttaggctccattttagagatgcggaaatggataaggtaaagtctcaacgtcagtacatggcagaatccagattggaaacaagatctgcttgactcaaagtctttgcACCAGAGTGTAGTTGCAGTG-AATATCACTTCAAATAAATGGAAGCCATTTATCAGA---------------------------------------------------------------GGTGT------TAATCTCTCTCCGGGTAAcaggcatttacgattgagccatgagtttgtgtcttattaactttgtgctcttggatgag----------------------tttctttgcc------------tcttggagccttcc-ttttttcacctatgatgtggg-ttgatagtacgtaactcacagaggtttctt-atgggctaaagaaga---- i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1743440 353 - 2415367 gccctgtgaggaaggagttttaggctccattttagagatgcagaaatggataaggtaaagtctcaacgtcagtacatggcagaatccagattggaaacaagatctgcttgactcaaagtctttgcACCAGAGTGTAGTTGCAGTG-AATATCACTTCAAATAAATGGGAGCCATTTATTAGA---------------------------------------------------------------GGTGT------TAATCTCTCTCTGGGTAAcaggaatttatgattgagccatgagtttgtgtcttactagctttgtgctcttggatgag----------------------tctctttgcc------------tcttggcgccttac-tttttttgcctatgatgtggg-ttgatagtacataactgacagaggtttctt-gtgggctaaagaaga---- i colAng1.NW_012115755v1 C 0 C 0 s proCoq1.NW_012152163v1 765995 360 - 940639 gccccacggggaagcaattttaggttccattttcgagatgcggaaatggatgaggtgaagtctcataggcagtacgtggcagagtccagatttgaaactgggtctgtttgactcaaagtcGTTGTACCAAAGTGTAGTTGCAGTG-AATGTCACTTTAAATACGTGGAAGCTATTTATTCAA---------------------------------------------------------------GGTTTTATTAATAATCTCTCTCCagttgagaggaatttatggttgagtcttgaatctgcctcttactagctttgtggtcttggatgag----------------------tttctttgcc------------tctttcagccttac-ttttttcacctatgatgtgggagggataatacccaactcacaaaggtttgtc-atggtctgaagaaga---- i proCoq1.NW_012152163v1 C 0 I 16 s otoGar3.GL873522 1236664 349 + 48283576 gccctgtggggaaggaattttaggttctattttagagatacagaaatggatgaggtgaagtgtcatagtcagtacatagctgagtccagatttgaaacttggtctgtttgactcaaagtctttgTATCAGAGTGTAGCTGAAATTCAATGTCACTTTAAACAAATGGAAGCTATCTATTCAA---------------------------------------------------------------GGGTT------TAATCTCTCTTCagtaaagaggaatttatgattgagttttgaagctgcctctaggtggctttatggtcttgaatgaa----------------------tttcttgg--------------------agccttactttttttcgcctatggtatggggatgataatacccaattcacaAACATTTCTTAATTGGCTCTAGAAGA---- i otoGar3.GL873522 C 0 I 2 s mm10.chr13 65986372 373 - 120421639 TCTCACTGAAGAAATAATTTTAGGCTTCATTGTAGAGATGTCGAATCAGACGAGGTAAGGTTTAATTATCAGGTCACAGCAGAATGAAGATT-----CAAAAACCCATTGATCCGA--TCTTTATATCAGAACATAGGTATAGAG-AATGCCACTTTAAATAAA------CCATTTGCTAGA---------------------------------------------------------------TGTTT------AAACCCATCTCTAGTTAATATGAATCAACG-TTGAGTCTCAAA--TGTTCCTTTTTAAATTTGTGGTTTTGAATGAGGGcctccccatctcccttccccctcctcttcctcctcttcattttcctGCAGCCTTATGTGTTAACACCTACAACATGGGAGTGGTAACACCTAAGTCACAGAGGTTCCAC-GTGGGTTACAGACAG---- i mm10.chr13 C 0 I 2 s dasNov3.JH562710 252380 396 - 960158 ACTCTGT---------ATTTTAGGTTCTATTTTAGAGATAAGGAAATAGATGAGGTGAAGT------GACAGCACATGACAG--TCCCTATACAAAACCAGGTGTGTTTGACTCG-TGTCTTTGTACCATAGTGTAGTGGTGGTG-AATGGTGCTTTAAATAAATAGAAGCCATTTATTTTATGAGAGTAAATGGAAAATTCAGGTTACattaaaatttaaattaataaaagaaatttaaatttGGGTTT------TAATCCTCAT-----TAATGGGAATTTAGCACTgaatctcacttctgcctgttactaacttcgtggtcttggatgag----------------------tgtgtttgct------------tcctggagcctcac-ttttttcttctagtatacaagggtggcagtacctaattcacagggatttctt-attgggtgaagaaga--tg i dasNov3.JH562710 C 0 C 0 e cebCap1.NW_016107999v1 68447 5 - 709587 I e saiBol1.JH378186 2213141 0 + 10068113 C e calJac3.chr2 64087475 0 + 204313951 C e canFam3.chr4 37170079 847 + 88276631 I e aotNan1.NW_018501968v1 1168766 5 - 2246441 I a score=109853.000000 s hg38.chr5_KI270795v1_alt 56459 18 + 131892 ctgctgcttgcgaacggg s panTro5.chr5 5306645 18 - 181907262 ctgctgcttgcgaacggg i panTro5.chr5 C 0 C 0 s panPan2.chr5 5569105 18 - 183735486 ctgctgcttgcgaacggg i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1699135 18 + 3967317 ctgcTGCTTGCGAACGGG i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4575755 17 + 163208435 -tgctgcttgcgaacggg i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5756173 17 - 180051392 -tgctgcttgcaaaCGGG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5942634 17 - 181584905 -tgctgcttgcaaaCGGG i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 973003 17 - 16193990 -tgctgcttgcaaaCGGG i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1794176 17 - 21434487 -tgctgcttgcaaaCGGG i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4756715 17 - 82825804 -tgctgcttgcaaaTGGG i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 262403 17 + 2521317 -tgctgcttgcaaaCGGG i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1743793 17 - 2415367 -tgctgcttgcaaaCGGG i colAng1.NW_012115755v1 C 0 C 0 s otoGar3.GL873522 1237015 15 + 48283576 ---GCACCTGTGGATGGG i otoGar3.GL873522 I 2 C 0 s mm10.chr13 65986747 15 - 120421639 ---ATGCCTACAGAAGGG i mm10.chr13 I 2 C 0 s dasNov3.JH562710 252776 15 - 960158 ---gcacctgtgagcggg i dasNov3.JH562710 C 0 C 0 e cebCap1.NW_016107999v1 68447 5 - 709587 I e saiBol1.JH378186 2213141 0 + 10068113 C e calJac3.chr2 64087475 0 + 204313951 C e canFam3.chr4 37170079 847 + 88276631 I e proCoq1.NW_012152163v1 766355 16 - 940639 I e aotNan1.NW_018501968v1 1168766 5 - 2246441 I a score=674954.000000 s hg38.chr5_KI270795v1_alt 56477 83 + 131892 tttcatgtagcattctaaggatataaaATACAGAAGCTGACTCCCATGCCTATTGATTCCAGCCTGGAGATGGACATAAATAC s panTro5.chr5 5306663 83 - 181907262 tttcatgtagcattctaaggatataaaATACAGAAGCTGACTCCCATGCCTATTGATTCTAGCCTGGAGATGGACATAAATAC i panTro5.chr5 C 0 C 0 s panPan2.chr5 5569123 83 - 183735486 tttcatgtagcattctaaggatataaaATACAGAAGCTGACTCCCATGCCTATTGATTCTAGCCTGGAGATGGACATAAATAC i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1699153 83 + 3967317 TTTCATGTAGCATTCTAAGGATATAAAATACAGAAGCTGACTCCCATGCCTATTGATTCCAGCCTGGAGATGGACATAAATAC i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4575772 83 + 163208435 tttcatgtagcattctaaggatataaaATACAGAACCTGACTCCCATGCCTATTGATTCCAGCCTGGAGATGGACATAAATAC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5756190 83 - 180051392 TTTCATGTAGCATTCTAAGAATATCAAATACAGAACCTGACTCCCATGCCTATTGATTCCAGCCTGGAGATGGACATAAATAT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5942651 83 - 181584905 TTTCATGTAGCATTCTAAGAATATCAAATACAGAACCTGACTCCCATGCCTATTGATTCCAGCCTGGAGATGGACATAAATAC i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 973020 83 - 16193990 TTTCATGTAGCATTCTAAGAATATCAAATACAGAACCTGACTCCCATGCCTATTGATTCCAGCCTGGAGATGGACATAAATAC i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1794193 83 - 21434487 TTTCATGTAGCATTCTAAGAATATCAAATACAGAACCTGACTCCCATGCCTATTGATTCCAGCCTGGAGATGGACATAAATAC i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4756732 83 - 82825804 TTTCATGTAGCATTCTAAGAATATAAAATACAGAACCTGACTCCCATGCCTATTGATTCCAGCCTGGAGATGGACATAAATAC i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 262420 83 + 2521317 TTTCATGTAGCATTCTAAGAATATCAAATACAGAACCTGACTCCCATGCCTATTGATTCTAGCCTGGAGATGGACATAAATAC i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1743810 83 - 2415367 TTTCATGTAGCATTCTAAGAATATGAAATACAGGACCTGACTCCCATGCCTATTGATTCCAGCCTGGAGATGGACATAAATAC i colAng1.NW_012115755v1 C 0 C 0 s proCoq1.NW_012152163v1 766371 83 - 940639 cttcatgcagtgcTCTAAGAATGTAAAATAGGGAAGCTGCCTCCCATGCCTGTGCATTCCAGACTGCAGATGGATATACATGC i proCoq1.NW_012152163v1 I 16 I 70 s otoGar3.GL873522 1237030 83 + 48283576 CTTCATGCAACGCTCTAGGAATGTAAAATGGGGAATCTGACTCCCATGCCTGTTGATTCCAGGCTGGAGATGGACATATATGC i otoGar3.GL873522 C 0 I 14 s mm10.chr13 65986762 78 - 120421639 CTCCAAGCAGTAC-CTGGTAATGT--AATCAGGGGCCTCTCTCCCGGGACTATTGATTCCAGACT--ATATGGGCAGAGGAGC i mm10.chr13 C 0 I 13 s dasNov3.JH562710 252791 81 - 960158 ctttatacagagctcccagaacgcagAACAGGGAACTTGACCCACAAACCTGTCGACTC--GGCTGGGGAAGGAAACAAATGC i dasNov3.JH562710 C 0 I 23 e cebCap1.NW_016107999v1 68447 5 - 709587 I e saiBol1.JH378186 2213141 0 + 10068113 C e calJac3.chr2 64087475 0 + 204313951 C e canFam3.chr4 37170079 847 + 88276631 I e aotNan1.NW_018501968v1 1168766 5 - 2246441 I a score=382014.000000 s hg38.chr5_KI270795v1_alt 56560 55 + 131892 TACTg----tggggactgtgggg--gctagaggccacatgctagttgccattgaaaaggat s panTro5.chr5 5306746 55 - 181907262 CACTg----tggggactgtgggg--gctagaggccacatgctagttgccattgaaaaggat i panTro5.chr5 C 0 C 0 s panPan2.chr5 5569206 55 - 183735486 CACTg----tggggactgtgggg--gctagaggccacatgctagttgccattgaaaaggat i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1699236 55 + 3967317 CACTg----tggggactgtgggg--gctagaggccacatgctcgttgccattgaaaaggat i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4575855 55 + 163208435 CACTg----tgaggactgtgggg--gctagaggccccatgctagttgccattgaaaaggat i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5756273 55 - 180051392 CACTg----tggggactgtgggg--gctagaggccacatgctagttgccgttgaaaaggat i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5942734 55 - 181584905 CACTg----tggggactgtgggg--gctagaggccacatgctagttgccgttgaaaaggat i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 973103 55 - 16193990 CACTg----tggggactgtgggg--gctagaggccacatgctagttgccgttgaaaaggat i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1794276 55 - 21434487 CACTg----tggggactgtgggg--gctagaggccacatgctagttgccgttgaaaaggat i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4756815 54 - 82825804 CACgg----tggggactgt-ggg--gctagaggccacatgctagttgctgttgaaaaggat i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 262503 55 + 2521317 CACTg----tggggactgtgggg--gctagaggccacatgctagttgccgttgaaaaggat i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1743893 55 - 2415367 CGCTg----tggggactgtgggg--gctagaggccacatgctagttgccgttgaaaaggat i colAng1.NW_012115755v1 C 0 C 0 s otoGar3.GL873522 1237127 54 + 48283576 AGCTA----TAGGGACTACGGGG--GTGGAAAGTTACACGGCGTTTGA-ATTAAAAGGGCT i otoGar3.GL873522 I 14 I 3 s mm10.chr13 65986853 54 - 120421639 ACCTA----TGGAGATTGTGGTGATGTTGGAGGT---ATGTAAATCGCCATGTAAAGAAAC i mm10.chr13 I 13 I 1 s dasNov3.JH562710 252895 59 - 960158 tacaggaactcgggactgtgggg--gctggaggacacatgacacaggccattgaaagggac i dasNov3.JH562710 I 23 C 0 e cebCap1.NW_016107999v1 68447 5 - 709587 I e saiBol1.JH378186 2213141 0 + 10068113 C e calJac3.chr2 64087475 0 + 204313951 C e canFam3.chr4 37170079 847 + 88276631 I e proCoq1.NW_012152163v1 766454 70 - 940639 I e aotNan1.NW_018501968v1 1168766 5 - 2246441 I a score=1657169.000000 s hg38.chr5_KI270795v1_alt 56615 219 + 131892 gggggcagctgcagtt-----c--------cagctcttccaacacgtgagaacttg--agctcgggatatagat---ctgattttccaagaggagccaaaagcctcaatttg-tttatgaactctcctgattgtt--------aaatgttggcatttaattgaaaCAGAAATCGTGGGGACT--AC-ACAAAGTTTTTGGCTGCAGGTGAC----AG-TTTTGGCAGCAAA--GCTCCCATG--gtgccaggctctgt s panTro5.chr5 5306801 219 - 181907262 gggggcagctgcagtt-----c--------cagctcttccaacacgtgagaacttg--agctcgggatatagat---ctgattttccaagaggagccaaaagcctcaatttg-tttatgaactctcctgattgtt--------aaatgttggcatctaattgaaaCAGAAATCGTGGGGACT--AC-ACAAAGTTTTTGGCTGCAGGTGAC----AG-TTTTGGCAGCAAA--GCTCCCACG--gtgccaggctctgt i panTro5.chr5 C 0 C 0 s panPan2.chr5 5569261 219 - 183735486 gggggcagctgcagtt-----c--------cagctcttccaacacgtgagaacttg--agctcgggatatagat---ctgattttccaagaggagccaaaagcctcaatttg-tttatgaactctcctgattgtt--------aaatgttagcatctaattgaaaCAGAAATCATGGGGACT--AC-ACAAAGTTTTTGGCTGCAGGTGAC----AG-TTTTGGCAGCAAA--GCTCCCACG--gtgccaggctctgt i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1699291 219 + 3967317 gggggcagctgcagtt-----c--------cagctcttccaacacatgagaacttg--agctcgggatatagat---ctgattttccaagaggagccaaaagcctcaatttg-tttatgaactctcctgattgtt--------aaatgttggcatctaattgaaaCAGAAATCGTGGGGACT--AC-ACAAAGTTTTTGGCTGCCGGTGAC----AG-TTTTGGCAGCAAA--GCTCCCACG--GTGCCAGGCTCTGT i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4575910 219 + 163208435 gggggcagctgcaatt-----c--------cagttcttcccgcacatgagaacttg--agttcgggatatagat---ctgattttccaagtggagccaaaaacctcaatttg-tttatgaactctcctgattttt--------aaatgttggcatctaattgaaacagaaatcatggggact--aa-acaaaGTTTTTGACTGCAGGTGAC----AG-TTTTGGCAGCAAA--GCTCCCACA--GTGCCAGGCTCTGT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5756328 218 - 180051392 ggggacagctgcagtt-----c--------cagctcttcccacatatgagaacttg--agctcgggatatagat---ctaattttccaagaggagccaaaaacctcaatttg-tttatgaactctcctgattttt--------aaatgttggcgtctgattgaaaCAGAAATCATGTGGAC-------CAAAGTTCTTGACAGCAGGTGAAAGG-AG-TTTTGGCAGCAAA--GCTCCCACA--GTGCCGGGCTCTGT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5942789 218 - 181584905 ggggacagctgcagtt-----c--------cagctcttcccacatatgagaacttg--agctcgggatatagat---ctaattttccaagaggagccaaaaacctcaatttg-tttatgaactctcctgattttt--------aaatgttggcgtctgattgaaacagaaatcatgtggac-------caaaGTTCTTGACAGCAGGTGAAAGG-AG-TTTTGGCAGCAAA--GCTCCCACA--GTGCCGGGCTCTGT i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 973158 218 - 16193990 ggggacagctgcagtt-----c--------cagctcttcccacatatgagaacttg--agctcgggatatagat---ctaattttccaagaggagccaaaaacctcaatttg-tttatgaactctcctgattttt--------aaatgttggcgtctgattgaaacagaaatcatgtggac-------caaaGTTCTTGACAGCAGGTGAAAGG-AG-TTTTGGCAGCAAA--GCTCCCACA--GTGCCGGGCTCTGT i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1794331 218 - 21434487 ggggacagctgcagtt-----c--------cagctcttcccacacatgagaacttg--agctcgggatataaat---ctaattttccaagaggagccaaaaacctcaatttg-tttatgaacgctcctgattttt--------aaatgttggcatctgattgaaaCAGAAATCATGTGGAC-------CAAAGTTCTTGACAGCAGGTGAAAGG-AG-TTTTGGCAGCAAA--GCTCCCACA--GTGCCGGGCTCTGC i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4756869 218 - 82825804 ggggacagctgcagtt-----c--------cagctcttcccacacatgagaacttg--agctcgggatatagat---ctaattttccaagaggagccaaaaacctcaatttg-tttatgaactctcctgattttt--------aaatgttggcatctgattgaaacagaaatcatgtggac-------caaaGTTCTTGACAGCAGGTGAAAGG-AG-TTTGGGCAGCAAA--GCTCCCACA--GTGCTGGGCTCTGT i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 262558 218 + 2521317 ggggacagctgcagtt-----c--------cagctcttcccacacatgagaacttg--agctcgggatatagat---ctaattttccaagaggagccaaaaacctcaatttg-tttatgaacgctcctgattttt--------aaatgttggcatctgattgaaaCAGAAATCATGTGGAC-------CAAAGTTCTTGACAGCAGGTGAAAGG-AG-TTTTGGCAGCAAA--GCTCCCACA--GTGCCGGGCTCTGT i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1743948 218 - 2415367 ggggacagctgcagtt-----c--------cagctcttcccacacatgagaacttg--agatcgggatatagat---ctaattttccaagaggagccaaaaacctcaatttg-tttatgaactctcctgattttt--------aaatgttggcatctgattgaaaCAGAAATCATGTGGAC-------CAAAGTTCTTGACAGCAGGTGAAAGG-AG-TTTTGGCAGCAAA--GCTCCCACA--GTGCCAGGCTCTGT i colAng1.NW_012115755v1 C 0 C 0 s proCoq1.NW_012152163v1 766524 230 - 940639 GGGGCAAGCCTAAATG-----C--------TGGCTCTTCCCAcatgtgagaacttgggagctctgggtgtagatcttctaattttccaagagaagctaaaaacctcaatttg-tttatgaactctcttgattttt--------acatgttggcatctaattgaaacagaaatcatgtgggccaaac-ataaAGTTCTTGACTGCGGGTGAAAGG-AGTTTTTGGTAACAGA--GCTCCTACA--GTGCCGGGCTCTGT i proCoq1.NW_012152163v1 I 70 C 0 s otoGar3.GL873522 1237184 237 + 48283576 GATGACAGCCAAAATGCTGGCC--------TGGCTCTTCCCAcatgtgagaatttgcactcccttggtatagatcacctaattttttaagagaagctaaaaacctcaatttg-tttataaatttttttgattttt--------caatgttggcatctaattgaaacagagatcacgtgggccaaac-ataaAGTTCTTGACTGCAGGTGAAAGG-AGGTTTTGGCAACAGAGTGTTCCTACA--gtgcagggctctgt i otoGar3.GL873522 I 3 C 0 s mm10.chr13 65986908 225 - 120421639 GGCCTCGCTTGCAATT-----C--------TGGCTGTTCTTAC-----AGAATTTG--AATTCTGGGTATAGAT---CAACGTTTCTAAGATAGGTCAAAA-CCTCAGTTTGCTTTGTGGATTCTCTTGATTTTTCCCTTCCCCAACATCAGTCTGTAATTAAGACAGAAACTACGTGGGCCAAACAATGTAGTTCTTGACTGCAGGTGAAAGGTAT-TCTGGGTAACAGA--GCTTCCTTG--GGACTAGGCT---- i mm10.chr13 I 1 C 0 s dasNov3.JH562710 252954 230 - 960158 -aggagcaccacaagt-----cagtccgcatggactattgtacatgtgggaacctg--aggtcagggtgtagct---ctcagtatccaagagaagctgaaagcctcatttta-tttataaaggctcccagtgtgt--------aagtgtcagcatctaattttta-aaaattcatgtgagcc--aa-acaaaaaacTTGACTGCAGGTGAAAGGTGG-TTTTGGTAATAGG--GTTCCTACAGGGTGCCTGACTCTC- i dasNov3.JH562710 C 0 C 0 e cebCap1.NW_016107999v1 68447 5 - 709587 I e saiBol1.JH378186 2213141 0 + 10068113 C e calJac3.chr2 64087475 0 + 204313951 C e canFam3.chr4 37170079 847 + 88276631 I e aotNan1.NW_018501968v1 1168766 5 - 2246441 I a score=218204.000000 s hg38.chr5_KI270795v1_alt 56834 17 + 131892 gctagggtg-----gctgggga------ s panTro5.chr5 5307020 17 - 181907262 gctagggtg-----gctgggga------ i panTro5.chr5 C 0 C 0 s panPan2.chr5 5569480 17 - 183735486 gctagggtg-----gctgggga------ i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1699510 17 + 3967317 GCTAGGGTG-----GCTGGGGA------ i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4576129 17 + 163208435 GCTAGGGTG-----GTTGGGGA------ i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5756546 17 - 180051392 GCTAGGGTG-----GCTGGGGA------ i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5943007 17 - 181584905 GCTAGGGTG-----GCTGGGGA------ i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 973376 17 - 16193990 GCTAGGGTG-----GCTGGGGA------ i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1794549 17 - 21434487 GCTAGGGTG-----GCTGGGGA------ i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4757087 17 - 82825804 GCTAGGGTG-----GCTGGGGA------ i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 262776 17 + 2521317 GCTAGGGTG-----GCTGGGGA------ i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1744166 17 - 2415367 GCTAGGGTG-----GCTGGGGA------ i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64087475 17 + 204313951 GCTAGGGTG-----GCTGGGGA------ i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2213141 17 + 10068113 GCTAGGGTG-----GCTGGGGA------ i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 68452 17 - 709587 GCTAGTGTG-----GCTGGAGA------ i cebCap1.NW_016107999v1 I 5 C 0 s aotNan1.NW_018501968v1 1168771 17 - 2246441 GCTAGGGTG-----GCTGGGGA------ i aotNan1.NW_018501968v1 I 5 C 0 s proCoq1.NW_012152163v1 766754 17 - 940639 GCTAGGCTG-----ACCAGAGA------ i proCoq1.NW_012152163v1 C 0 C 0 s otoGar3.GL873522 1237421 17 + 48283576 gctaggcct-----accagaga------ i otoGar3.GL873522 C 0 C 0 s mm10.chr13 65987133 9 - 120421639 --------G-----GCTGGAGA------ i mm10.chr13 C 0 C 0 s dasNov3.JH562710 253184 27 - 960158 -CTGGGGTGTGGAAAGTAGGGAAAGAGG i dasNov3.JH562710 C 0 C 0 e canFam3.chr4 37170079 847 + 88276631 I a score=5135569.000000 s hg38.chr5_KI270795v1_alt 56851 365 + 131892 caaaggcaagtcagtc-ggtcct-------ccctgggagg--ctgcgatccag----gagagcagCCTTC--CA--TGGAAAAGGGGCACTATAATAGGATTTAGTGAAATGGGATTTGACCCACATTATCCTTGAGCTCCTTAGGCGTGGACCTGCAGAACG-----------------------CTTTTTGTA-----GCTGAAATTGAAAAAGTAAAACAA-TTTGCAGCAGGCAGAGCGAATGT---CTTGGGAAACGTTTCTAGG--GCTTTCATGTTTCCTGAGGGCTTCC-CCTATCTCATTTGAGTTATTCCATTAAATGAGCAATAATCCTATTTTCCTGGGCAGGGGG-----CA-CTAAGGCTGATAGAAAATAAGGGTCTGAGAGTCATACAAGCTGGGAAAAGGGA----GAGGC s panTro5.chr5 5307037 359 - 181907262 caaaggcaagtcagtc-ggtcct-------ccctgggagg--ctgcgatccag----gagagcagCCTTC--CA--TGGAAAAGGGGCACTATAATAGGATTTAGTGAAATGGGATTTGACCCACATTATCCTTGAGCTCCTTAGGCGTGGACCTGCAGAACA-----------------------CTTTTTGTA-----GCTGAAATTGAAAAAGTAAAACAA-TTTGCAGCAGGCAGAGCGAATGT---CTTGGGAAacatttctagg--gctttcatgtttcctgagggcttcc-cctatctcatttgagttattccattaaatgagcaataatcctattttcctgggcaggggg-----ca-ctaaggctgatagaaaataag------agagtcatacaagctgggaaaaggga----gaggc i panTro5.chr5 C 0 C 0 s panPan2.chr5 5569497 359 - 183735486 caaaggcaagtcagtc-ggtcct-------ccctgggagg--ctgcaatccag----gagagcagccttc--ca--tggaaaaggggcactataataggatttagtgaAATGGGATTTGACCCACATTATCCTTGAGCTCCTTAGGCGTGGACCTGCAGAACA-----------------------CTTTTTGTA-----GCTGAAATTGAAAAAGTAAAACAA-TTTGCAGCAGGCAGAGCGAATGT---CTTGGGAAACATTTCTAGG--GCTTTCATGTTTCCTGAGGGCTTCC-CCTATCTCATTTGAGTTATTCCATTAAATGAGCAATAATCCTATTTTCCTGGGCAGGGGG-----CA-CTAAGGCTGATAGAAAATAAG------AGAGTCATACAAGCTGGGAAAAGGGA----GAGGC i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1699527 365 + 3967317 CAAAGGCAAGTCAGTC-GGTCCT-------CCCTGGGAGG--CTGCAATCCAG----GAGAGCAGCCTTC--CA--TGGAAAAGGGGCACTATAATAGGATTTAGTGAAATGGGATTTGACCCACATTATCCTTGAGCTCCTTAGGCGTGGACCTGCAGAACA-----------------------CTTTTTGTA-----GCTGAAATTGAAAAAGTAAAACAA-TTTGCAGCAGGCAGAGCGAATGT---CTTGGGAAACATTTCTAGG--GCTTTCATGTTTCCTGAGGGCTTCC-TCTATCTCATTTGAGTTATTCCATTAAATGAGCAATAATCCTATTTTCCTGGGTAGGGGG-----CA-CTAAGGCTGATAGAAAATAAGGGTCTGAGAGTCGTACAAGCTGGGAAAAGGGA----GAGGC i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4576146 369 + 163208435 CAAAGGCAAGTCAGTC-GGTCCT-------CCCTGGGAGG--CTGCGATCCAGGGGTGAGAGAAGCCTTT--CA--TGGAAAAGGGGCACTGTAATAGGATTTAGTGAAATGGGATTTGACCCACATTATCCTTGAGCTCCTTAGGCATGGACCTGCAGAACA-----------------------CTTTTTGTA-----GCTGAAATTGAAAAAGTAAAACAA-TTTGCAGCAGGCAGAGGGAATGT---CTTGGGAAACGTTTCTAGG--GCTTTCATGTTTCCTGAGGGCTTCC-CCTATCTCATTTGAGTTGTTCCATTAAATGAGCAATAATCCTATTTTCCTGGGCAGGGGG-----CA-CTAAGGCTGATAGAAAATAAGGGTCTGAGAGTCATACAAGCTGGGAAAAGGGA----GAGGC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5756563 369 - 180051392 CAAAGGCAAGTCAGTC-GGGTCT-------CCCTGGGAGG--CTGCAATCCAGGGGTGAGAGCGGCCTTC--CA--TGGAAAAGGGGCACTATAATAGGATTTAGTTAAATGGGATTTGACCCACATTATCCTCGAGCTCCTTAGGCGTGGACCTGCAGAACG-----------------------CTTTTTGTA-----GCTGAAATTGAAAAAGTAAAACAA-TTTGCAGCAGGCAGAGGGAATGT---CTTGGGAAACGTTTCTAGG--GCTTTCATGTTTCCTGAGGGCTTCC-CCTATCTCATTTGAGTTATTCCATTAAATGAGCAATAATCCTATTTTCCTGGGCGGGGGG-----CA-CTACGGCTCATAGAAAATAAAGGTCTGAGAATCATACAAGCTGGGACAAGGGA----GAGGC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5943024 369 - 181584905 CAAAGGCAAGTCAGTC-GGGTCT-------CCCTGGGAGG--CTGCAATCCAGGGGTGAGAGCGGCCTTC--CA--TGGAAAAGGGGCACTATAATAGGATTTAGTTAAATGGGATTTGACCCACATTATCCTCGAGCTCCTTAGGCGTGGACCTGCAGAACG-----------------------CTTTTTGTA-----GCTGAAATTGAAAAAGTAAAACAA-TTTGCAGCAGGCAGAGGGAATAT---CTTGGGAAACGTTTCTAGG--GCTTTCATGTTTCCTGAGGGCTTCC-CCTATCTCATTTGAGTTATTCCATTAAATGAGCAATAATCCTATTTTCCTGGGCGGGGGG-----CA-CTACGGCTCATAGAAAATAAAGGTCTGAGAATCATACAAGCTGGGACAAGGGA----GAGGC i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 973393 369 - 16193990 CAAAGGCAAGTCAGTC-GGGTCT-------CCCTGGGAGG--CTGCAATCCAGGGGTGAGAGCGGCCTTC--CA--TGGAAAAGGGGCACTATAATAGGATTTAGTTAAATGGGATTTGACCCACATTATCCTCGAGCTCCTTAGGCGTGGACCTGCAGAACG-----------------------CTTTTTGTA-----GCTGAAATTGAAAAAGTAAAACAA-TTTGCAGCAGGCAGAGGGAATGT---CTTGGGAAACGTTTCTAGG--GCTTTCATGTTTCCTGAGGGCTTCC-CCTATCTCATTTGAGTTATTCCATTAAATGAGCAATAATCCTATTTTCCTGGGCGGGGGG-----CA-CTACGGCTCATAGAAAATAAAGGTCTGAGAATCATACAAGCTGGGACAAGGGA----GAGGC i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1794566 368 - 21434487 CAAAGGCAAGTCAGTC-GGG-CT-------TCCTGGGAGG--CTGCGATCCAGGGGTGAGAGCGACCTTC--CA--TGGAAAAGGGGCACTATAATAGGATTTAGTTAAATGGGATTTGACCCACATTATCCTTGAGCTCCTTAGGCGTGGACCTGCAGAACG-----------------------CTTTTTGTA-----GCTGAAATTGAAACAGTAAAACAA-TTTGCAGCAGGCAGAGGGAATGT---CTTGGGAAACGTTTCTAGG--GCTTTCATGTTTCCTGAGGGCTTCC-CCTATCTCATTTGAGTTATTCCATTAAATGAGCAATAATCCTATTTTCCTGGGTGGGGGG-----CA-CTACGGCTCATAGAAAATAAAGGTCTGAGAATCATACAAGCTGGGACAAGGGA----GAGGC i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4757104 369 - 82825804 CAAAGGCAAGTCAGTC-GGGCCT-------CCCTGGGAGG--CTGCGATCCAGGGGTGAGAGCGGCCTTC--CA--TGGAAAAGGAGCACTATGCTAGGATTTAGTTAAATGGGATTTGACCCACATTATCCTTGAGCTCCTTAGGCGTGGACCTGCAGAACG-----------------------CTTTTTGTA-----GCTGAAATTGAAAAAGTAAAACAA-TTTGCAGCAGGCAGAGGGAATGT---CTTGGGAAATGTTTCTAGG--GCTTTCATGTTTCCTGAGGGCTTCC-CCTATCTCATTTGAGTTATTCCATTAAATGAGCAATAATCCTATTTTCCAGGGCGGGGGG-----CA-CTACGGCTCATAGAAAATAAAGGTCTGAGAATCATACAAGCTGGGACAAGGGA----GAGGC i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 262793 368 + 2521317 CAAAGGCAAGTCAGTC-GGGCCT--------CCTGGGAGG--CTGCGATCCAGGGGTGAGAGCGGCCTTC--CA--TGGAAAAGGGGCACTATAATAGGATTTAGTTAAGTGGGATTTGACCCACATTATCCTTGAGCTCCTTAGGCGTGGACCTGCAGAGCG-----------------------CTTTTTGTA-----GCTGAAATTGAAACAGTAAAACAA-TTTGCAGCAGGCAGAGGGAATGT---CTTGGGAAACGTTTCTAGG--GCTTTCATGTTTCCTGAGGGCTTCC-CCTATCTCATTTGAGTTATTCCATTAAATGAGCAATAATCCTATTTTCCTGGGCGGGGGG-----CA-CTACGGCTCATAGAAAATAAAGGTCTGAGAATCATACAAGCTGGGACAAGGGA----GAGGC i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1744183 369 - 2415367 CAAAGGCAAGTCAGTT-GGGCCT-------CCCTGGGAGG--CTGCGATCCAGGGGTGAGAGCGGCCTTC--CA--TGGAAAAGGGGCACTATAATAGGATTTAGTTAAATGGGATTTGACCCACATTATCCTTGAGCTCCTTAGGCGTGGACCTGCAGAACG-----------------------CTTTTTGTA-----GCTGAAATTGAAAAAATAAAACAA-TTTGCAGCAGGCAGAGGGAATGT---CTTGGGAAGCGTTTCTAGG--GCTTTCGTGTTTCCTGAGGGCTTCC-CCTATCTCATTTGAGTTATTCCATTAAATGAGCAATAATCCTATTTTCCTGGGCGGGGGG-----CA-CTAAGGCTTATAGAAAATAAGGGTCTGAGAGTCATACAAGCTGGGACAAAGGA----GAGGC i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64087492 367 + 204313951 CAAAGGCAAGTCAGTT-TGGCCT-------CCCTGGGAGG--CTGTGATCCAGAGGTGAGAGCAGCCTTC--CA--TGGGAAAGGGGCACTATAATAGGATTTGGTGAAATGGGATTTTATCCACATTATCCTTGAGATCCTAAGGCATGGACCT-CAGAACA-----------------------CTTTTTATA-----GCTGAAATTGAAAAAGTAAAACAA-TTTTCAGCA-GCAGAAGGAATGT---CTTGGGAAACATTTCTAGG--GCTTTTGTGTTTCCTTAGGGCTTCT-CCTATCTCATTAGAGTTATTCCATTAAAAGAGCAATAATCCTGTTTTCTTGGGCAGGGGG-----CA-CTAAGGCTCATAGAAAACAAGGGTTTGAGAGTCATACAAGCCGGGAGAAGGGA----GAGGC i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2213158 368 + 10068113 CAACGGTAAGTCAATT-TGGCCT-------CCCTGGGAGG--CTGCAATCCAGAGGTGAGAGCAGCCTTC--CA--TGGGAAAGGGGCACTCTAATAGGATTTGGTGAAATGGGATTTTACCCTCATTATCCTTGAGCTCCTAAGGCATGGACCT-CAGAACA-----------------------CTTTTTGTA-----GCTGAAATTGAAAAAGTAAAACAA-TTTGCAGCAGGCAGAAGGAATGT---CTTGGGAAACGTTTCTAGG--GCTTTTGTGTTTCCTGAGGGCTTCT-CCTATCTCATTTGAGTTATTCCATTAAAAGAGCAATAATCCTGTTTTCTTGGGCAGGGGA-----AA-CTAAGGCTCATTGAAAACAAGGGTTTGAGAGTCATACAAACTAGGAGAAGGGA----GAGGC i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 68469 368 - 709587 CAAAGGCAAGTCAGTT-TGGCCT-------CCCTGGGAGG--CTGCGATGCAGAGGTGAGAGCAGCCTTC--CA--TGGGAAAGGGGCACTATAATAGGATTTGGTGAAATGGGATTTTACCCACATTATCCTTGAGCTCCTAAGGCATGGACCT-CAGAACA-----------------------CTTTTTGTA-----GCTGAAATTGAAAAAGTAAAACAA-TTTGCAGAAGGCAGAAGGAATGT---CTTGGGAAACGTTTCTAGG--GCTTTTGTGTTTCCTGAGGGCTTTT-CCTATCTCATTTGAGTTATTCCATTAAAAGAGCAATAATCTTGTTTACTTGGGCAGGGTG-----CA-CTAAGGCTCATAGAAAACAAGGGTTTGAGAGTCATACAAGCTGGGAGAAGGGA----GAGGC i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1168788 368 - 2246441 CAAAGGCAAGTCAGTT-TGGCCT-------CCATAGGAGG--CTGCGATCCAGAGGTAAGAGCAGCCTTC--CA--TGGGAAAGGGGCACTATAATAGGATTTGGTGAAATGGGATTTTACCCACATTATCCTTGAGCTCCTAAGGCATGGACTT-CAGAACA-----------------------CTTTTTGTA-----GCTGAAATTAAAAAAGTAAAACAA-TTTACAGCAGGCAGAAGGAATGT---CTTGGGAAACGTTTCTAGG--GCTTTTGTGTTTCCTGAGGGCTTCT-CCTGTCTCATTTGAGTTATTCCATTAAAAGAGCAATAATCCTGTTTTCTTGGGCAGGGGG-----CA-CTAAGGCTCATAGAATACAAGGGTTTGAGAGTCATACAAGCTGGGAGAAGGGA----GAGGC i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 766771 374 - 940639 CAAAGGCAGGCGAGCC-GGCCTC-------CCTGGGGACG--CTGTGATCCCGGGGTGAGAGAAGCCTTCTACA--CGGGAGAGGGGCACTGTAATAGGGTTTGGTGAAATGGGGCTTGACCCACATTATCCTTGAGCTCCTTAGGCCTGGACCTGCAGAGAG-----------------------CTTTTTGTA-----GCTGAAATTGAAATAGTAAAACAA-TTTGCGGCAGGCAGAGGGAATGT---CCTGGGAAACGTTTCTAGG--GCTTTAGTGTTTCCTGAGGGCTTTT-GCTATCTCACTCGATTCATTCTGTTAAATGAACAATAATCCCATTTTTCGGGGGTGGGGGAGC--GA-CTAAAGCTTATAGACAATAAGGGTGTGAGAGTCACCCAAGCTGGGACAAGGGA----GAGGC i proCoq1.NW_012152163v1 C 0 I 341 s otoGar3.GL873522 1237438 369 + 48283576 cagaggcaagttaaccaggtctc-------ccctgggagg--ctgtagt-ccagtgtgagagaAGCCTTCTACG--TGGGAAAGGGGCACTGTAATAGGATTTGGTGAAATAGGATTTGACCCACATTATCCTTTAGTTCCTTAGGCCTGGACCTGCAGAGAG-----------------------CTTTTTGTG-----CCTGAAATTGAAAAAGTAAAACAA-TTTGCAGCAGGCAGAGGAAATGT---CTTGGGAAACGTTTCCAGG--GCTTTCGTGTTTCCTGAGGGCTTTT-GTTATCTCATTTGATTCATTCTGTTAAATGAACAATAATTCCATTTTGGGGGTTTGAGGGGGCATGA-CTAAGGC-TATA------AGGGGTATGAGAGTGACTCACGTTGGGATGAGGGA----GAGGC i otoGar3.GL873522 C 0 C 0 s mm10.chr13 65987142 366 - 120421639 CA-----AAACTGGAC-TGGCTT-------TCCCTGGCGG--CTGCTGTACAGTGGAGGGGAAAGCCTCACACA--CAGGGAGGAGACATTGTTATAGGATTGGATATGGTGGGATTAGACTTTCATTATCCTTGACCTCCTTGGGCTTACATCTGTAGAATGGTTCCTGCCCACCCCCCACCCCCCTTTTTGCCAAAATGCTGAAATTGACGTGGTAAAACACTTTTGTGGCTCGTGGAGGGGATGTTTCCTTAGGGAAGA--------------------------AGGGCTTTC-TCTA--TCATTTGACTTATTTCGCC-AATGAGTAATAATCCCATATCTCTTGT---AGAG-----CATTTAAGACTCA--GACAATAAGAGTCTGAGAGTTCAGAGAGCTGGGGTGA-GGA----GGGAC i mm10.chr13 C 0 C 0 s canFam3.chr4 37170926 384 + 88276631 cagaagctggccagtt-agcaccatatatctccagagaggctctgggattaaaggcaccaggtacctctg--TG--CAGCAAAGTGGCACTATGAGAGGATTTGGTATAATGGGATTTGACCCGAATTATCCTTGAACTCCTTAGGCCTGGGTCTGTTGAATG-----------------------CTTTTTGTA-----GCTGAAATTGAAACAGTAAAACAA-TTTGTGGCATTCAGTGGGAATGT---CTTGGGAAATGTTACCAGGAAactttagggtttcctaagggctttcaactatttcattttatcctgtctgttaaatgagcaataatctcattttcctgg-tgggtgc-----aa-gcacgggttatagaaaataaggatctcagagttacacagGCTGGAACAAGATCTCTTGAGTC i canFam3.chr4 I 847 I 8 s dasNov3.JH562710 253211 343 - 960158 CAAAGGCAAATCAGCC-TGCCTC-------CCCTGGGTGA-------------------GGCAAGCCTTC--CATTTAGGAAATTGGCACTATAATAGGATTTAACGTAATGGGATTTGCCCAGCATTATCCTTGAACTCCTTAGGCCTAGACCTGCAGACTG-----------------------CTTTTTGTA-----GCTGAAATTGAAACAGTAAAGCAA-TTTATGGCATGTGGAAGGGATAT---CTTGGGTAACGTTTCtagg--gctttactgtttcctgagggctttc-acgatctcgtttgatccagtctgttaaatgtg-ggtaatcctattttactggt--ggggt-----ga-ccaaggctcatagaaaagaagagtc------ttatacagat--gggtagggga----gtggc i dasNov3.JH562710 C 0 C 0 a score=3812816.000000 s hg38.chr5_KI270795v1_alt 57216 327 + 131892 CAGCCTGGGAC-CC------------------------------------AG----------------------------------GC------------------------------------TCAGGTAGGGAAGGGGAATTGGGGCCtgacaatatttgaacccctaatgttcgta-ctgatctcattggatctcccaggcaaccatgtaa-ggtcaatct---tatcctcactttatagcattaactgaggctcagagggatgaaatgac-t-attcaaagacacaAACCCAAGACACTC------AGGA-A-GG-TACA--AAAA--------TGTCCATGCGCT-CCTGa-aatcatctgca---aaatg-ttttatgtttgtacttgtatccatttcccagggtaaggagcttaaaactttcaaaggattctccaaggggtcagtgattctcaaagatt s panTro5.chr5 5307396 329 - 181907262 cagcctgggac-cc------------------------------------ag----------------------------------gc------------------------------------ttAGGTAGGGAAGGGGAATTGGGGCCtgacaatatttgaacccctaatgttcgta-ctgatctcattggatcttccaggcaaccatgtaa-ggtcaatctcattatcctcactttatagcattaactgaggctcagagggatgaaatgac-t-attcaaagacacaAACCCAAGACACTC------AGGA-A-GG-TACA--AAAA--------TGTCCATGCGct-cctga-aatcatctgca---aaatg-ttttatgtttgtactt-tatccatttcccagggtaaggagcctaaaactttcaaaggattctccaaggggtcagtgattctcaaagatt i panTro5.chr5 C 0 C 0 s panPan2.chr5 5569856 330 - 183735486 CAGCCTGGGAC-CC------------------------------------AG----------------------------------GC------------------------------------TTAGGTAGGGAAGGGGAATTGGGGCCtgacaatatttgaacccctaatgttcgta-ctgatctcattggatcttccaggcaaccatgtaa-ggtcaatctcattatcctcactttatagcattaactgaggcttagagggatgaaatgac-t-attcaaagacacaAACCCAAGACACTC------AGGA-A-GG-TACA--AAAA--------TGTCCATGCGCT-CCTGa-aatcatctgca---aaatg-ttttatgtttgtacttgtatccatttcccagggtaaggagcctaaaactttcaaaggattctccaaggggtcagtgattctcaaagatt i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1699892 330 + 3967317 CAGCCTGGGAC-CC------------------------------------AG----------------------------------GC------------------------------------TCAGGTAGGGAAGGGGAATTGGGGCCTGACAATATTTGAACCCCTGATGTTCGTA-CTGatctcattggatcttccaggcaaccatgtaa-ggtcaatctcattatcctcactttatagcattaactgaggctcagagggatgaaatgac-t-attcaaagacacaAACCCAAGACACTC------AGGA-A-GG-TACA--AAAA--------TGTCCATGCGct-cctga-aatcatctgca---aaatg-ttttatgtttgtacttgtatccatttcccagggtaaagagcctaaaactttcaaaggattctccaaggggtcagtgattctcaaagatt i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4576515 330 + 163208435 CAGCCTGGGAC-CC------------------------------------AG----------------------------------GC------------------------------------TCAGGTAGGGAAGGGGAATTGGGGCCTGACAATATTTGAACCCCTAATGTTcata-ctgatctcactggatcttccaggcaaccgtgtaa-ggtcaatctcattatcctcactttatagcattaactgaggctcagagggatgaaaggac-t-attcaaagacacaAACCCAAGACACTC------AGGA-A-GG-TACA--AAAG--------TGTCCATGCGct-cctga-aatcatctgca---aaatg-ttttatgtttgtacttgtgtccatttccaagggtaaagagcctaaaactttcaaaggattctcaaaggggtccgtgattctcaaagatt i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5756932 328 - 180051392 CAGCCTGGGAC-CC------------------------------------AG----------------------------------GA------------------------------------TCAGGTAGGGAAGGGAAATTGGGGCCTGACAATATTTGaacacctagtgttcata-ctgatctcattggatcttccaggcaa-catgtaa-ggtcaatctcattatcctcactttatagcattaactgaggctcagggggatgaaatgac-t-attcaaagacacaAACCCAAGACACTC------AGGA-A-GG-TAc---aaag--------tgtccatgcgct-cctga-aatcatctgcg---aaatg-ttttttgtttgtacttctgtccatttcccagggtagagagcccaaaactttcaaaggattctcaaaggggtcaatgattctcaaaggtt i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5943393 328 - 181584905 CAGCCTGGGAC-CC------------------------------------AG----------------------------------GA------------------------------------TCAGGTAGGGAAGGGAAATTGGAGCCTGACAATATTTGaacacctagtgttcata-ctgatctcattggatcttccaggcaa-catgtaa-ggtcaatctcattatcctcactttatagcattaactgaggctcagggggatgaaatgac-t-attcaaagacacaAACCCAAGACACTC------AGGA-A-GG-TAC---AAAG--------TGTCCATGTGct-cctga-aatcatctgcg---aaatg-ttttttgtttgtacttctgtccatttcccagggtaaagagcccaaaactttcaaaggattctcaaaggggtcaatgattctcaaaggtt i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 973762 328 - 16193990 CAGCCTGGGAC-CC------------------------------------AG----------------------------------GA------------------------------------TCAGGTAGGGAAGGGAAATTGGGGCCTGACAATATTTGaacacctagtgttcata-ctgatctcattggatcttccaggcaa-catgtaa-ggtcaatctcattatcctcactttatagcattaactgaggctcagggggatgaaatgac-t-attcaaagacacaAACCCAAGACACTC------AGGA-A-GG-TAc---aaag--------tgtccatgcgct-cctga-aatcatctgcg---aaatg-ttttttgtttgtacttctgtccatttcccagggtaaagagcccaaaactttcagaggattctcaaaggggtcaatgattctcaaaggtt i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1794934 328 - 21434487 CAGCCTGGGAC-CC------------------------------------AG----------------------------------GA------------------------------------TCAGGTAGGGAAGGGAAATTGGGGCCTGACAATATTTGaacacctagtgttcata-ctgatctcattggatcttccaggcaa-catgtaa-ggtcaatctcattatcctcactttatagcattaactgaggctcagggggatgaaatgac-t-attcaaagacacaAACCCAAGACACTC------AGGA-A-GG-TAc---aaag--------tgtccatgcgct-cctga-aatcatctgca---aaatg-ttttatgtttgtacttctgtccatttcccagggtaaagagcccaaaactttcaaaggattctcaaaggggtcaatgattctcaaaggtt i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4757473 328 - 82825804 CAGCCTGGTAC-CG------------------------------------AG----------------------------------GA------------------------------------TCAGGTAGGGAAGGGAAATTGGGGCCTGACAATATTTGAACACCTAATGTTCATA-CTGatctcattggatcttccaggcaa-catgtaa-ggtcaatctcattatcctcactttatagcattaactgaggctcagggggatgaaatgac-t-attcaaagacacaAACCCAAGACACTC------AGGA-A-GG-TAc---aaag--------tgtccatgcgct-cctga-aatcatctgca---aaatg-ttttaggtttgtacttctgtccatttcccagggtaaagagcccaaaactttcaaaggattctcaaaggggtcaatgattctcaaaggtt i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 263161 328 + 2521317 CAGCCTGGGAC-CC------------------------------------AG----------------------------------GA------------------------------------TCAGGTAGGGAAGGGAAATTGGGGCCTGACAATATTTGaacacctagtgttcata-ctgatctcattggatcttccaggcaa-catgtaa-ggtcaatctcattatcctcactttatagcgttaactgaggctcagggggatgaaatgac-t-attcaaagacacaAACCCAAGACACTC------AGGA-A-GG-TAc---aaag--------tgtccatgcgct-cctga-aatcatctgca---aaatg-ttttatgtttgtacttctgtccatttcccagggtaaagagcccaaaactttcaaaggattctcaaaggggtcaatgattctcaaaggtt i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1744552 324 - 2415367 CAGCCTGGGAC-CC------------------------------------AG----------------------------------GA------------------------------------TCAGGTAGGGAAGGGAAATTGGGgcctgacaatatttgaacacctagcattcata-ctgatctcattggatcttcccggcaa-catgtaa-ggtcaatctcattatcctcactttatagcattaactgaggctcagggggatgaaatgac-t-ATTC--AGACACAAACCCAAGACACTC------AGGA-A-GG-TAC-----AG--------TGTCCATGCGct-cctga-aatcgtccgca---aaatg-ttttttgtttgtacttctgtccatttcccagggtaaagagcccaaaactttcaaaggattctcaaaggggtcaatgattctcaaagatt i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64087859 330 + 204313951 CAGCCTGGGAC-CC------------------------------------AG----------------------------------GC------------------------------------TCAGGTAGGGATGGGGAAAGGGGCGCTGACAATATTTGAACCTCAAATATTCGTA-CTGatcttattggatcttccaggcaaccatgtca-ggtcaatctcattatcctcacttcatagtgttaactgaggctcagggggttgaaatgac-t-attcaaagacacacaCTAAAGACACTC------AGGA-A-GG-TACc--aaag--------tgtccatgcgct-cctga-attcatctgca---aaatg-ttttttgcttatatttttgtccatttcccagggtaaagaatgcaaaactttcaacagattctcaaaggggtcaatgattctcaaatatt i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2213526 330 + 10068113 CAGCCTGGGAC-CC------------------------------------AG----------------------------------GC------------------------------------TCAAGTAGGGAAGGGGAAAGGGGGCCTGACAATATTTGAACCTCAAATATTCGTA-CTGatctcattggatcttccaggcaaccatgtaa-ggtcaatctcattatcctcacttcatagcattaactgaggctcagggggatgaaatgac-t-attcaaagacacacaCTAAAGACATTC------AGGA-A-GG-TACc--aaag--------tgtccatgcgct-cctga-attcatttgca---aaatg-ctttttgcttatatttttgtccatttcccagggtaaagaatgcaaaactttcaacagattctcaaagcggtcaatgattctcaaatatt i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 68837 331 - 709587 CAGCCTGGGAC-CC------------------------------------AG----------------------------------GC------------------------------------TTAAGTAAGGAAGGGGAAAGGGGGCCTGACAATATTTGAACCTCAAATATTCGTA-CTGatcttattggatcttccaggcaatcatgtaa-ggtcaatctcattatcctcacttcatagcattaactgaggctcaggggagtgaaatgac-t-attcaaagacacacaCTAAAGACACTC------AGGA-A-GG-TACC--AAAG--------TATCCATGTGct-cctga-attcatctgca---aaatgttttttttcttctatttttgtccatttcccagggtaaagaatgcaaaactttcaacagattctcaaaggggtcaatgattttcaaatatt i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1169156 330 - 2246441 CAGCCTGGAAC-CC------------------------------------AG----------------------------------GC------------------------------------TCAGGTAGGGAAGGGGAAAGGGGGCCTGACAATATTTGAACCTCAAATATTCGTA-CTGatcttattagatcttccaggcaaccatgtaa-ggtcaatctcattatcctcacttcatagcattgactgaggctcagggggatgaaatgac-t-attcaaagacacacaCTAAAGACACTC------AGGA-A-GG-TACC--AAAG--------TATCCATGTGTT-cctga-attcatctgca---aaatg-ttttttgcttatgtttttgtccatttcccagggtaaagaatgcaaaactttcaacagattctcaaagaggtcaatgattctcaaatgtt i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1237807 339 + 48283576 ATGCCTAGGAC-CCAGGTCTTTCAAGTCTATTTCCTACCTTGCCACACAGAG----------------------------------GC------------------------------------TCAGGCAGGGGAGGGATGATGAGGATTGATAATATTTGAACCCCGAATGTTCACA-CTGatctcattggatcttccagcacaccctgaga-ggtcagtgtcattatctgcactttaaagatataactgaggcttagagagatgaaatggctt-gtccaaggacacataCCCATGACGCTC------AGGA-AGGG-GACC--AAAAGAGGGGACTGCCCATGAGCT-CCTGA-AGTCATCTGCA---AAATA-TTTT--GTTTGCATTTTTGTCTGCTTCTCAGGGTAAAGAGC-----------------TTCCCAAA-----CAGTG------------- i otoGar3.GL873522 C 0 C 0 s mm10.chr13 65987508 356 - 120421639 AAGCCTGGGAC-CC------------------------------------AGGTCTCCAGCACCTCTTTCCCACAGATCTCTCAGTGC------------------------------------TCAAGTAGGGAAGGAGAAATGGGTCCTGAGGATACTTGAACACCAAAGGTTCATG-CTAGTCTTGGAGGATCCTTC---CATTCACACAGTGGTTGACCTGATCAACCCTACTTCAGAGCAG-AGCTGAGCTCCAGAGGCACAAGATGAG-------AAGAAGATTTGCCCTGGAAAGCCCAGGGAAGGA-A-GA-CACC--GAAG--------AGTCCTTGGCAC-TTTCA-AGATGTCTGAAGATGAACA-CATTAGGCTTGCGGTCCATTCCGTTTTGCAGAGTA-----CCCCAAACTCTCAGAGGACTTTC----GGGTCAGTGACCCCAACTTGGC i mm10.chr13 C 0 I 1 s canFam3.chr4 37171318 329 + 88276631 CAGTTTGTCACACC------------------------------------GT----------------------------------GG------------------------------------CTCGATGGGTCAGGGGCAGTGCAGACAGACAGTATTTGAACACTAGATGATCATG-CTGATGTCCGCGCATCTGCC-TTcaaccctgaga-gggtggtc--actatctccacctcagggcagtgactgaaactcagagggctaaggtgactt-gtcgagagatacaagcc-gggaagCTC------AGGA-A-AGCTACCCAAGAG--------TACCCAAGAGCT-CCTTATGGTCATCTGCA---AAATG-GTTTACATTTGCACTTCTGTCCCTTTTTGAGAGTATAGAGCCT-AAACTTTCAACAGATTATCAAA--GGTCAGTGATTTCaaatggta i canFam3.chr4 I 8 C 0 s dasNov3.JH562710 253554 353 - 960158 aagcctag-ac-cc------------------------------------aa----------------------------------gccTTGTGAATCTGTTTCCCACCTTGCCACACAGAGTTTCAGTTAGGGAAGGAA-----------GTGAGTATTTGAATACCACATGATcatatctgacctcattggatctcccagtcaaccgtgtga-ggtcattctcattttccccattctagaacagaagctgaggctcagagggatgaactgcc-tcgtccaaagacacacattcaag-tgttc------atgaca-gG-TACCAAagag--------tgtctgtggactccctga-agtcatctgta---aaata-tttt--gttttcacttttgtccatttcttaaggttaag-gtcctaaacttttaac--attctcaaagaggtcaatgattc-cagtggta i dasNov3.JH562710 C 0 C 0 e proCoq1.NW_012152163v1 767145 341 - 940639 I a score=1453983.000000 s hg38.chr5_KI270795v1_alt 57543 104 + 131892 aagagccactAATTTAAGCCAAGG-CTATTCTGATTCCAAAGCCTGTTCTCTGAGGCCCCCTG-TGCCAGACTCtggt---taagagaacgttctttaaagtcaaactc s panTro5.chr5 5307725 104 - 181907262 aagagccactAattcaagccaagg-cttttctgattccaaagcctgttctctGAGGCCCCCTC-TGCCAGACCCtggt---taagagaacgttctttaaagtcaaactc i panTro5.chr5 C 0 C 0 s panPan2.chr5 5570186 104 - 183735486 aagagccactAATTTAAGCCAAGG-CTTTTCTGATTCCAAAGCCTGTTCTCTGAGGCCCCCTC-TGCCAGACTCtggt---taagagaacgttctttaaagtcaaactc i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1700222 104 + 3967317 aagagccactTATTTAAGCCAAGG-CTTTTCTGATTCCAAAGCCTGTTCTCTGAGGCCCCCTC-TGCCAGACTCtggt---taagagaacgttctttaaagtcaaactc i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4576845 104 + 163208435 aagagccactAatttaagccaagg-cttttctgattccaaagcctgttctctGAGGCCCCCTC-TGCCAGACTCtggt---taagagaacgttctttaaagtcaaactc i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5757260 104 - 180051392 aaaagccactgATTTAAGCCAAGA-CTTTTCTGATTCCAAAGACTGTTCTCCGAGGCCCCCTC-TGCCAcacactggt---taagagaatgttctttaaagtcaaactc i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5943721 104 - 181584905 aaaagccactgATTTAAGCCAAGA-CTGTTCTGATTCCAAAGACTGTTCTCCGAGGCCCCCTC-TGCCACACTCTGGT---TAAGAGAATGTTCTTTAAAGTCAAACTC i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 974090 104 - 16193990 aaaagccactgATTTAAGCCAAGA-CTTTTCTGATTCCAAAGACTGTTCTCCGAGGCCCCCTC-TGCCACACTCTGGT---TAAGAGAATGTTCTTTAAAGTCAAACTC i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1795262 104 - 21434487 aaaagccactgATTTAAGCCAAGA-CTTTTCTGATTCCAAAGACTGTTCTCCGAGGCCCCCTC-TGCCACACTCtggt---taagagaatgttctttaaagtcaaactc i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4757801 104 - 82825804 aaaagccactgATTTAAGCCAAGA-CTTTTCTGATTCCAAAGACTGTTCTCCGAGGCCCCCTC-TGCCACACTCTGGT---TAAGAGAATGTTCTTTAAAGTCAAACTC i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 263489 104 + 2521317 aaaagccactgATTTAAGCCAAGA-CTTTTCTGATTCCAAAGACTGTTCTCCGAGGCCCCCTC-TGCCACACTCTGGT---TAAGAGAATGTTCTTTAAAGTCAAACTC i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1744876 105 - 2415367 aaaagccactgATTTAAGCCAAGG-CTTTTCTGATTCCAAAGACTGTTCTCCGAGGCCTCCTCTTGCCACACTCTGGT---TAAGAGAACGTTCTTTAAAGTCAAACTC i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64088189 107 + 204313951 aatagccactAATTTAAGCCATGG-CTTTTCTAACTCCAAAGCCTGTTCTCTGAGGCCCTCTC-TGCCAGACCCTGGTTAATAAGAGAACATTCTTTAAAGTCAAACCC i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2213856 104 + 10068113 aatagccactgATTTAAGCCAAGG-CTTTTCTAACTCCAAAGCCTGTTCTCTGAGGCCCTCTC-TGCCAGAATCTGGT---TAAGAGAACATTTTTTAAAGTCAAACCC i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 69168 104 - 709587 aatagctactAatttaagccaagg-cttttctaactccaaagcctgttctctGAGGCCCTCTC-TGCCAGACTCTGGT---TAAGAGAACATTCTTTAAAGTCAAACCC i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1169486 103 - 2246441 aatagccactAATTTAAGCCAAGG-CTTTTCTAACTCCAAAGTCTGTTCTCTGAGGCCCTCTC-TGCCAGACTCTGGT---TAAGAGAACGTTC-TTAAAGTCAAACCC i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 767486 104 - 940639 AAGAGTCACTAATTTAAGCTGAGC-CCTTTCTGACCCCAAAGCCTGTTCTCTGAGGCCCCCTC-CACCAGATCCTGGT---TAAGAGAATGTTCCTTAAAGTCAAACTC i proCoq1.NW_012152163v1 I 341 I 6023 s otoGar3.GL873522 1238146 101 + 48283576 AAGAG---CTCATTTAAGTCTAGC-CCTTTCTGACTCTAAGGCTTCTATTCAGAGGCCCCCTC-CACCAGATCCTGAT---TAAGAGAATTTTTTTTAAAGTCGAACTC i otoGar3.GL873522 C 0 C 0 s mm10.chr13 65987865 104 - 120421639 AAGCACTGCTGATTTAAGCAGAGT-CCTTTCTGACCCCAAAGCCACCGTGGCTCAGCTTCCTA-TGTGGGTTTCTAGA---TAAGAGAATATTTCTTAGGGTCAAACTC i mm10.chr13 I 1 I 11 s canFam3.chr4 37171647 104 + 88276631 aagacatacgaggttagctcgagg-tctttctgattccaaagcctgtgctcCGAGGCCCCCTC-CACTTGATCCtgat---taaaagaacatcctttaaagtcaaactg i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 253907 89 - 960158 aagaaccactAACCTAAGCCGAGGTCTTTTCCGATACCAAA--------------GCTGCCTC-CACTGGATCCTGGT---TAAGGCAACATC--TAAGAATTAAACCC i dasNov3.JH562710 C 0 C 0 a score=707784.000000 s hg38.chr5_KI270795v1_alt 57647 62 + 131892 ------atat--------------aa-----------------aacccagatcg-------------------tactagctg-tgagaccttgtt-tcctcatctataaaatagggatTC s panTro5.chr5 5307829 62 - 181907262 ------atat--------------aa-----------------aacccagatcg-------------------tactagctg-tgagaccttgtt-tcctcatctataaaatagggatTC i panTro5.chr5 C 0 C 0 s panPan2.chr5 5570290 62 - 183735486 ------atat--------------aa-----------------aacccagatcg-------------------tactagctg-tgagaccttgtt-tcctcatctataaaatagggattc i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1700326 62 + 3967317 ------atat--------------aa-----------------aacccagatcg-------------------tactagctg-tgagaccttgtt-tcctcatctataaaatagggatTC i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4576949 62 + 163208435 ------atat--------------aa-----------------aacccagatct-------------------tactagctg-taagaccttgtt-tccccatctgtaaaatagggatTC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5757364 62 - 180051392 ------aaat--------------aa-----------------gacccagatct-------------------tactagctg-tgagaccttgtt-tccccatctataaaatagggatTC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5943825 62 - 181584905 ------AAAT--------------AA-----------------GACCCAGATCT-------------------TACTAGctg-tgagaccttgtt-tccccatctataaaatagggatTC i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 974194 62 - 16193990 ------AAAT--------------AA-----------------GACCCAGATCT-------------------TACTAGctg-tgagaccttgtt-tccccatctataaaatagggatTC i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1795366 62 - 21434487 ------aaat--------------aa-----------------gacccagatct-------------------tactagctg-tgagaccttgtt-tccccatctataaaatagggatTC i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4757905 62 - 82825804 ------AAAT--------------AA-----------------GACCCAGATCT-------------------TACTAGctg-tgagaccttgtt-tccccatctataaaatagggatTC i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 263593 62 + 2521317 ------AAAT--------------AA-----------------GACCCAGATCT-------------------TACTAGctg-tgaaaccttgtt-tccccatctataaaatagggatTC i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1744981 62 - 2415367 ------AAAT--------------AA-----------------GACCCAGATCT-------------------TACTAGCTG-TGAGACCTCGTT-CCTCCATCTATAAAATAGGGATTC i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64088296 63 + 204313951 ------ATGT--------------AA-----------------GAGCCAGATCT-------------------TACTAGCTGTtgagaccttgtt-tccccatctataaaatagggatTC i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2213960 63 + 10068113 ------ATGT--------------AA-----------------GAGCCAGATCT-------------------TACTAGCTGTTGAGACCTTGTT-TCCCCAtctataaaacaaggattc i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 69272 63 - 709587 ------ATGT--------------AA-----------------GAGCCAGATCT-------------------TACTAGCTGCTGAGACCTTGTT-TCCCCATCTATAAAATAGCGATTC i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1169589 61 - 2246441 ------ATGT--------------AA-----------------GAGCCAGATCT-------------------TACTAGCTGTTGAGACCTTGTT-TCCCCATCTGTAAAAC--GGATTC i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1238247 79 + 48283576 ------ATAT--------------AAAATCTGGGTCTGCAACTGACTCAGATCT-------------------TACTAGCTG-Cgagacttcatt-tcctcatctataaagtagggattc i otoGar3.GL873522 C 0 C 0 s mm10.chr13 65987980 58 - 120421639 ------ACAG--------------GG-----------------GAAACGGTTC--------------------TATTGCTCG-TTAG--TGTATT-TCCACATCTATAACGT-GGGATTC i mm10.chr13 I 11 I 2637 s canFam3.chr4 37171751 79 + 88276631 --------at--------------ga-----------------gctttgggactgcatcctggctctgccacctactacctg-tgggacttCATT-TCCTTGTTTGTAAAATTGGGattc i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 253996 83 - 960158 ATCCTAATATGtgggtttgtgtccag-----------------gctctaccctt-------------------tactagctg-tgaggcctCATTCTCCCCGTCTGTAAGATTAGGactc i dasNov3.JH562710 C 0 C 0 e proCoq1.NW_012152163v1 767590 6023 - 940639 I a score=15561.000000 s hg38.chr5_KI270795v1_alt 57709 1 + 131892 a s panTro5.chr5 5307891 1 - 181907262 a i panTro5.chr5 C 0 C 0 s panPan2.chr5 5570352 1 - 183735486 a i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1700388 1 + 3967317 a i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4577011 1 + 163208435 A i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5757426 1 - 180051392 a i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5943887 1 - 181584905 A i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 974256 1 - 16193990 a i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1795428 1 - 21434487 a i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4757967 1 - 82825804 A i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 263655 1 + 2521317 a i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1745043 1 - 2415367 A i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64088359 1 + 204313951 a i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2214023 1 + 10068113 a i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 69335 1 - 709587 A i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1169650 1 - 2246441 a i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1238326 1 + 48283576 a i otoGar3.GL873522 C 0 C 0 s canFam3.chr4 37171830 1 + 88276631 a i canFam3.chr4 C 0 I 379 s dasNov3.JH562710 254079 1 - 960158 a i dasNov3.JH562710 C 0 C 0 e mm10.chr13 65988038 2637 - 120421639 I e proCoq1.NW_012152163v1 767590 6023 - 940639 I a score=11662.000000 s hg38.chr5_KI270795v1_alt 57710 1 + 131892 g s panTro5.chr5 5307892 1 - 181907262 g i panTro5.chr5 C 0 C 0 s panPan2.chr5 5570353 1 - 183735486 g i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1700389 1 + 3967317 g i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4577012 1 + 163208435 g i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5757427 1 - 180051392 g i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5943888 1 - 181584905 g i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 974257 1 - 16193990 g i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1795429 1 - 21434487 g i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4757968 1 - 82825804 g i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 263656 1 + 2521317 g i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1745044 1 - 2415367 g i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64088360 1 + 204313951 g i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2214024 1 + 10068113 g i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 69336 1 - 709587 G i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1169651 1 - 2246441 g i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1238327 1 + 48283576 t i otoGar3.GL873522 C 0 C 0 s dasNov3.JH562710 254080 1 - 960158 g i dasNov3.JH562710 C 0 T 55559 e mm10.chr13 65988038 2637 - 120421639 I e canFam3.chr4 37171831 379 + 88276631 I e proCoq1.NW_012152163v1 767590 6023 - 940639 I a score=201106.000000 s hg38.chr5_KI270795v1_alt 57711 23 + 131892 ccaggcgtggtggcacacacttt s panTro5.chr5 5307893 23 - 181907262 ccaggcgtggtggcacacacttt i panTro5.chr5 C 0 C 0 s panPan2.chr5 5570354 23 - 183735486 ccaggcgtggtggcacacacttt i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1700390 23 + 3967317 ccaggtgtggtggcacacacttt i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4577013 23 + 163208435 ccaggcgtggtggcacgcacttt i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5757428 23 - 180051392 ccgggcagggtggcatgcacttt i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5943889 23 - 181584905 ccgggcagggtggcacgcacttt i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 974258 23 - 16193990 ccgggcagggtggcacgcacttt i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1795430 23 - 21434487 ccgggcatggtggcacgcacttt i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4757969 23 - 82825804 ctgggcagggtggcacacacttt i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 263657 23 + 2521317 ccgggcatggtggcacgcacttt i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1745045 22 - 2415367 ccaggcatggtggcacgcac-gt i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64088361 23 + 204313951 cagggcatggtggcatgcacttt i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2214025 23 + 10068113 cggggcatggtggcatgcacttt i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 69337 23 - 709587 TGgggcatggtggcatgcacttt i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1169652 23 - 2246441 cggggcatggtggcatgcacttt i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1238328 17 + 48283576 t------tattcgcacacatttt i otoGar3.GL873522 C 0 I 2392 e mm10.chr13 65988038 2637 - 120421639 I e canFam3.chr4 37171831 379 + 88276631 I e proCoq1.NW_012152163v1 767590 6023 - 940639 I e dasNov3.JH562710 254081 55559 - 960158 T a score=1301231.000000 s hg38.chr5_KI270795v1_alt 57734 123 + 131892 tagtcccagctgcttggaaggctgaggtgggaggatggcttgagcccaggagg-caaggctgcagtgagctgtgattgtgccactgcactccagcctgggtgatagaacgagaccccgcctctt s panTro5.chr5 5307916 123 - 181907262 tagtcccagctgcttggaaggctgaggtgggaggatggcttgagcccaggagg-caaggctgcagcgagctgtaattgtgccactgcactccagcctgggtgatagaacgagaccccgcctctt i panTro5.chr5 C 0 C 0 s panPan2.chr5 5570377 123 - 183735486 tagtcccagctgcttggaaggctgaggtgggaggatggcttgagcccaggagg-caaggctgcagcgagctgtaattgtgccactgcactccagcctgggtgatagaacgagaccccgcctctt i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1700413 123 + 3967317 tagtcccagctgcttggaaggctgaggtgggaggatggcttgagcccaggagg-caaggctgcagtgagctgtgattgtgccactgcactccagcctgggtgatagaacgagaccccgcctctt i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4577036 122 + 163208435 tagtcccagctgcttggaaggctgaggtgggaggatggcttgagcccaggagg-caaggctgcagtgagctgtga-tgtgccactgcactccagcctaggtgatagaatgagaccccgcctctt i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5757451 124 - 180051392 tagtcccagctacttggaaggctgaggtgggaggatggcttgagcccaggaggtcaaggctgcagtgagctgtgattgtgccactgcattccagcctgggtgacagaacgagaccccgcctctt i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5943912 124 - 181584905 tagtcccagctacttggaaggctgaggtgggaggatggcttgagcccaggaggtcaaggctgcagtgagctgtgattgtgccactgcattccagcctgggtgacagaacgagaccccgcctctt i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 974281 124 - 16193990 tagtcccagctacttggaaggctgaggtgggaggatggcttgagcccaggaggtcaaggctgcagtgagctgtgattgtgccactgcattccagcctgggtgacagaatgagaccccgcctctt i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1795453 124 - 21434487 tagtcccagctacttggaaggctgaggtgggaggatggcttgagcccaggaggtcaaggctgcagtgagctgtgattgtgccactgcattccagcctgggtgacagaacgagaccccgcctctt i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4757992 124 - 82825804 tagtcccagctacttggaaggctgaggtgggaggatggcttgagcccaggaggtcaaggctgcagtgagctgtgattgtgccactgcattccagcctgggtgacagaacgagaccccgcctctt i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 263680 124 + 2521317 tagtcccagctacttggaaggctgaggtgggaggatggcttgagcccaggaggtcaaggctgcagtgagctgtgattgtgccactgcattccagcctgggtgacagaacgagaccccgcctctt i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1745067 124 - 2415367 tagtcccagctacttggaaggctgaggtgggaggatggcttgagcccaggaggtcaaggctgcagtgagctgtgattgtgccactgcactccagcctgggtgacaggacgaggcgccacctctt i colAng1.NW_012115755v1 C 0 I 320 s calJac3.chr2 64088384 124 + 204313951 tagtcccagctacttggaaggctgaagtgggaggatggcttgagtccaggaggtcaaggctgcagcgagctgtgactgtgccactgcactccagcctgggtgacagaatgagacactgcctctt i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2214048 124 + 10068113 tggtcccagccacttggaaggctgaggtgggaggatggctcgagtccaggaggtcaaggctgcagcgagctgtgattgtgccactgcactccagcctgggtgtcagaatgagacaccgcctctt i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 69360 124 - 709587 tagtcccagccacttggaaggctgaagtgggaggatggcttgagtccaggaggtcaaggctgcagcgagctgtgattgtgccactgcactccagcctgggtgacagaatgagacattgcctctt i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1169675 124 - 2246441 tagtcccagccacttggaagcctgaggtgggaggatggtttgagcccaggaggtcaaggctgcagcgagctgtgattgtgccactgcactccagcctgggtgacagaatgagacactgcctctt i aotNan1.NW_018501968v1 C 0 C 0 e mm10.chr13 65988038 2637 - 120421639 I e otoGar3.GL873522 1238345 2392 + 48283576 I e canFam3.chr4 37171831 379 + 88276631 I e proCoq1.NW_012152163v1 767590 6023 - 940639 I e dasNov3.JH562710 254081 55559 - 960158 T a score=13154.000000 s hg38.chr5_KI270795v1_alt 57857 14 + 131892 taaaaaaacaaaaa s panTro5.chr5 5308039 14 - 181907262 taaaaaaaaaaaaa i panTro5.chr5 C 0 C 0 s panPan2.chr5 5570500 14 - 183735486 taaaaaaaaaaaaa i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1700536 14 + 3967317 taaaaaaaaaaaaa i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4577158 14 + 163208435 taaaaaaaaaaaaa i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5757575 6 - 180051392 --------aaaaaa i rheMac8.chr6 C 0 I 1 s macFas5.chr6 5944036 6 - 181584905 --------aaaaaa i macFas5.chr6 C 0 I 1 s macNem1.NW_012018466v1 974405 6 - 16193990 --------aaaaaa i macNem1.NW_012018466v1 C 0 I 1 s cerAty1.NW_012007035v1 1795577 6 - 21434487 --------aaaaaa i cerAty1.NW_012007035v1 C 0 I 1 s chlSab2.chr23 4758116 6 - 82825804 --------aaaaaa i chlSab2.chr23 C 0 I 1 s manLeu1.NW_012103943v1 263804 6 + 2521317 --------aaaaaa i manLeu1.NW_012103943v1 C 0 I 1 s calJac3.chr2 64088508 3 + 204313951 ----------aaa- i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2214172 8 + 10068113 -----aaaaaaaa- i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 69484 5 - 709587 --------aaaaa- i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1169799 4 - 2246441 ---------aaaa- i aotNan1.NW_018501968v1 C 0 C 0 e mm10.chr13 65988038 2637 - 120421639 I e otoGar3.GL873522 1238345 2392 + 48283576 I e canFam3.chr4 37171831 379 + 88276631 I e proCoq1.NW_012152163v1 767590 6023 - 940639 I e dasNov3.JH562710 254081 55559 - 960158 T e colAng1.NW_012115755v1 1745191 320 - 2415367 I a score=32205.000000 s hg38.chr5_KI270795v1_alt 57871 4 + 131892 aaaa s panTro5.chr5 5308053 4 - 181907262 aaaa i panTro5.chr5 C 0 C 0 s panPan2.chr5 5570514 4 - 183735486 gaaa i panPan2.chr5 C 0 M 205 s gorGor5.CYUI01015413v1 1700550 3 + 3967317 aaa- i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4577172 4 + 163208435 aaaa i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5757582 4 - 180051392 aaaa i rheMac8.chr6 I 1 C 0 s macFas5.chr6 5944043 4 - 181584905 aaaa i macFas5.chr6 I 1 C 0 s macNem1.NW_012018466v1 974412 4 - 16193990 aaaa i macNem1.NW_012018466v1 I 1 C 0 s cerAty1.NW_012007035v1 1795584 4 - 21434487 aaaa i cerAty1.NW_012007035v1 I 1 C 0 s chlSab2.chr23 4758123 4 - 82825804 aaaa i chlSab2.chr23 I 1 C 0 s manLeu1.NW_012103943v1 263811 4 + 2521317 aaaa i manLeu1.NW_012103943v1 I 1 C 0 s colAng1.NW_012115755v1 1745511 4 - 2415367 AAAA i colAng1.NW_012115755v1 I 320 C 0 s calJac3.chr2 64088511 4 + 204313951 aaaa i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2214180 4 + 10068113 aaaa i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 69489 4 - 709587 aaaa i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1169803 4 - 2246441 agaa i aotNan1.NW_018501968v1 C 0 C 0 e mm10.chr13 65988038 2637 - 120421639 I e otoGar3.GL873522 1238345 2392 + 48283576 I e canFam3.chr4 37171831 379 + 88276631 I e proCoq1.NW_012152163v1 767590 6023 - 940639 I e dasNov3.JH562710 254081 55559 - 960158 T a score=935185.000000 s hg38.chr5_KI270795v1_alt 57875 113 + 131892 aa-GGattcatttatttcacaaatgctttattgagctcctggctctgattcagacaccattctaggtgcttcggacacagcaatgaattaaacagtgtctctgctgtcattatt------- s panTro5.chr5 5308057 114 - 181907262 aaaGGattcatttatttcacaaatattttattgagctcctggctctgattcagacaccattctaggtgcttcggacacagcaatgaattaaacagtgtctctgctgtcattctt------- i panTro5.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1700553 112 + 3967317 aa-GGattcatttatttcacaaatatatt-ttgagctcctggctctgattcagacaccattctaggtgcttcagacacagcaatgaattaaacagtgtgtctgctgtagttatt------- i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4577176 113 + 163208435 aG-GGattcatttatttcacaaatattttattgagctcctgactctgattcagacaccattttatgtgctgaggacacagcaatgaattaaacagtatctctgctgtcattatt------- i nomLeu3.chr2 C 0 I 10 s rheMac8.chr6 5757586 113 - 180051392 aa-GGattaatttatttcacaaatattttattgagcccctggctctgattcagacaccattctaggtgctgaggacacaccaatgaattaaacagtgtctctgctgtcattatt------- i rheMac8.chr6 C 0 I 2 s macFas5.chr6 5944047 113 - 181584905 aa-GGattaatttatttcacaaatattttattgagcccctggctctgattcagacaccattctaggtgctgaggacacaccaatgaattaaacagtgtctctgctgtcattatt------- i macFas5.chr6 C 0 I 4 s macNem1.NW_012018466v1 974416 113 - 16193990 aa-GGattaatttatttcacaaatattttattgagcccctggctctgattcagacaccattctaggtgctgaggacacaccaatgaattaaacagtgtctctgctgtcattatt------- i macNem1.NW_012018466v1 C 0 I 4 s cerAty1.NW_012007035v1 1795588 113 - 21434487 aa-GGattaatttatttcacaaatattttattgagcccctggctctgattcagacaccattctaggtgctgaggacacaccaatgaattaaacagtgtctctgctgtcattatt------- i cerAty1.NW_012007035v1 C 0 I 11 s chlSab2.chr23 4758127 113 - 82825804 aa-GGattaatgtatttcacaaatattttattgagcccctggctctgattcagacaccattctaggtgctgaggacacaccaatgaattaaacagtgtctctgctgtcatcatt------- i chlSab2.chr23 C 0 I 5 s manLeu1.NW_012103943v1 263815 113 + 2521317 aa-GGattaatttatttcacaaatattttattgagcccctggctctgattcagacaccattctaggtgctgaggacacaccaatgaattaaacagtgtctctgctgtcatTAtt------- i manLeu1.NW_012103943v1 C 0 I 5 s colAng1.NW_012115755v1 1745515 113 - 2415367 AA-GGattaatttatttcacaaatattttattgagctcctggctctgattcagacaccattctaggtgctgaggacacaccaatgaattaaacagtgtctctgctgtcattatt------- i colAng1.NW_012115755v1 C 0 I 4 s calJac3.chr2 64088515 120 + 204313951 aG-GGattcatttatttcacaaatattttattaagctcctggctgcgattcagacactgttctaggtggtgaggacacagcaatgaattaaacagtgtctctgctgctgtcattcattctt i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2214184 120 + 10068113 aa-GGattcatttatttcacaaatattttattaagctcctggctgcgattcagacactgttctagatggtgaggacacagcaatgaattaaacagtgtctctgctgctgtcattcattctt i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 69493 120 - 709587 aa-GGattcatttatttcacaaatattttattaagctcctggctgcgattcagacactgttctaggtgatgaggacacagcaatgaattaaacagtgtctctgctgctgtcattcattctt i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1169807 120 - 2246441 aa-GGattaatttatttcacaaatattttattaagctcctggctgcgattcagacactgttcttggtggtgaggacacagcaatgaattaaacagtgtctctgctgctgtcattcattctt i aotNan1.NW_018501968v1 C 0 C 0 e mm10.chr13 65988038 2637 - 120421639 I e otoGar3.GL873522 1238345 2392 + 48283576 I e canFam3.chr4 37171831 379 + 88276631 I e proCoq1.NW_012152163v1 767590 6023 - 940639 I e dasNov3.JH562710 254081 55559 - 960158 T e panPan2.chr5 5570518 205 - 183735486 M a score=848517.000000 s hg38.chr5_KI270795v1_alt 57988 110 + 131892 ------------ctt------------tttttt---------ttgagatggagttttgctcttgttgcccaggctggaaagtgctatgatgcgatctcgactcatcacaacctccgcctcctgggttccagtgattcttctgc s panTro5.chr5 5308171 122 - 181907262 ------------cttcttctttttttttttttt---------ttgagatggagttttgctcttgttgcccaggctggaaagtgctatgatgcgatctcggctcatcacaacctccgcctcctgggttccagtgattcttctgc i panTro5.chr5 C 0 C 0 s panPan2.chr5 5570728 110 - 183735486 ------------Ctt------------tttttt---------ttgagatggagttttgctcttgttgcccaggctggaaagtgctatgatgcgatctcggctcatcacaacctccgcctcctgggttcgagtgattcttctgc i panPan2.chr5 M 205 C 0 s gorGor5.CYUI01015413v1 1700665 108 + 3967317 --------------------------ctttttt---------ttgagatggagttttgctcttgttgcccaggctggaaagtgctatgatgcgatctcggctcatcacaacctccgcctcctgggttccagtgattcttctgc i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4577299 110 + 163208435 ------------------------tttttttat---------ttgagatggagtttttctcttgttgcccaggctggaaagtgctatggtgtgatctcagctcatcgcaactgccgcctcctgggttcgagtgattcttctgc i nomLeu3.chr2 I 10 C 0 s rheMac8.chr6 5757701 107 - 180051392 ------------ttt------------ttttct---------tcgagatggaatttcactcttgttgcccaggctgg--agtgtaatggtgccatctcggctcatcg-aacctcagcctcctgggttcaagcgattctcctgc i rheMac8.chr6 I 2 C 0 s macFas5.chr6 5944164 107 - 181584905 ------------ttt------------ttttct---------tcgagatggaatttcactcttgttgcccaggctgg--agtgtaatggtgccatctcggctcatcg-aacctcagcctcctgggttcaagcgattctcctgc i macFas5.chr6 I 4 C 0 s macNem1.NW_012018466v1 974533 107 - 16193990 ------------ttt------------ttttct---------tcgagatggaatttcactcttgttgcccaggctgg--agtgtaatggtgccatctcggctcatcg-aacctcagcctcctgggttcaagcgattctcctgc i macNem1.NW_012018466v1 I 4 C 0 s cerAty1.NW_012007035v1 1795712 107 - 21434487 ------------ttt------------ttttct---------tcgagatggaatttcactcttgttgcccaggctgg--agtgtaatggtgccatctcggctcatcg-aacctcagcctcctgggttcaagcgattctcctac i cerAty1.NW_012007035v1 I 11 C 0 s chlSab2.chr23 4758245 107 - 82825804 ------------ttt------------ttttct---------tcgagatggaatttcactcttgttgcccaggctgg--agtgtaatggtgctatcttggctcatca-aacctcagcctcctgggttcaagtgattctcctgc i chlSab2.chr23 I 5 C 0 s manLeu1.NW_012103943v1 263933 116 + 2521317 ------------ttt------------tttttttttttttcatcgagatggaatttcactcttgttgcccaggctgg--agtgtaatggtgccatctcggctcatcg-aacctcagcctcctgggttcaagcgattctcctgc i manLeu1.NW_012103943v1 I 5 I 492 s colAng1.NW_012115755v1 1745632 107 - 2415367 ------------ctt------------ttttct---------ttgagatggaatttcactcttgttgcccaggctgg--agtgtaatggtgccatctcggctcatcg-aacctcagcctcctggattcaagcgattctcctgc i colAng1.NW_012115755v1 I 4 C 0 s calJac3.chr2 64088635 120 + 204313951 cttcttcttcttttt------------tttttt---------ttaagaaggaattttgctctttttgcctgggctgc--agtgcaatggcatgatctcggctcactgcaacctgtccctcctgtgctcaagcgattctcctgc i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2214304 113 + 10068113 ctt-------ttttt------------tttttt---------ttaagaaggatttttgctcttgttgcccaggctgc--agtgcaatggcgcgatcttggctcaccgcaacctgcccctcctgggctcaagtgattctcctgc i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 69613 110 - 709587 ctt----------tt------------tttttt---------ttaagaaggatttttgctcttgttgcctaggctgc--agtgcaatggcacgatctcggctcaacgcaacctgcccctcctgggctcaagcgattctcctac i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1169927 115 - 2246441 ctt-----ttttttt------------tttttt---------ttaagaaggatttttgctcttgttgcccaggctgc--agtgcaatggcacgatctcggcttaccgcaacctgcccctcctgggctcaagcgattctcctgc i aotNan1.NW_018501968v1 C 0 C 0 e mm10.chr13 65988038 2637 - 120421639 I e otoGar3.GL873522 1238345 2392 + 48283576 I e canFam3.chr4 37171831 379 + 88276631 I e proCoq1.NW_012152163v1 767590 6023 - 940639 I e dasNov3.JH562710 254081 55559 - 960158 T a score=2491336.000000 s hg38.chr5_KI270795v1_alt 58098 316 + 131892 ctcagcctcctgagtagctgggattacaggcatgggccgccacacccagctaattttgta-------tttttagtagagatggggtttctccgtgttggtcagg-ctggtctcaaactcccaacctcaggtgatctgcccacctcagcctcccaaagtgctgggattacaggcatgagccaccgtgcccagccctgtcatta---ttatattctgtgggaggataaagacaacaagcaagc-----agatatttgtgacatggtggtaagtggtacggagggaaatgaagg--ggtcagtggggtggg----gcatgcttcagggctggggctgcgTA s panTro5.chr5 5308293 318 - 181907262 ctcagcctcctgagtagctgggattacaggcatgggccgccacacccagctaattttgta-------tttttagtagagatggggtttctccgtgttggtcagg-ctggtctcaaactcccaacctcaggtgatctgcccacctcagcctcccaaagtgctgggattacaggcatgagccaccgtgcccagccctgtcatta---ttatattctgtgggaggataaagacaacaagcaagc-----agatatttgtgacatggtgataagtggtacggagggaaatgaaggcgggtcagtggggtagg----gcatgctTCAGGGCTGGGGCTACATA i panTro5.chr5 C 0 C 0 s panPan2.chr5 5570838 317 - 183735486 ctcagcctcctgagtagctgggattacaggcatgggccaccacacccagctaattttgta-------tttttagtagagatggggtttctccatgttggtcagg-ctggtctcaaactcccaacctcaggtaatctgcccacctcagcctcccaaagtgctgggattacaggcatgagccaccgtgcccagccCTGTCATTA---ttatattctgtgggaggataaagacaacaagcaagc-----agatatttgtgacatggtgataagtggtacggaggaaaatgaagg-gggtcagtggggtagg----gcgtgctTCAGGGCTGGGGCTACATA i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1700773 318 + 3967317 ctcagcctcctgagtagctgggattacaggcatgggccgccacacccagctaattttgta-------tttttagtagagatggggtttctctgtgttggtcagg-ctggtctcaaactcccaacctcaggtgatctgcccgcctcagcctcccaaagtgctgggattacaggcatgagccaccgtgcccggccctgtcatta---ttatattctgtgggaggataaagacaacaagcaagc-----agatatttgtgacatggtgataagtggtacggagggaaatgaaggcgggtcagtggggtagg----gcgtgctTCAGGGCTGGGGCTACATA i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4577409 323 + 163208435 ctcagcctcctgagtagctgggattgcaggcatgggccaccacacacagctaattttgta-------tttttagtagagatggggtttctccatgttggtcagg-ctggtctcaaactcccaacctcaggtgatctgcccacttc-gcctcccaaagtgctgggattataggcatgagccaccgtgcccagccctgtcattattcttacattctgtgggaggataaagacaacaagcaagc-----agatatatgtgagatggtgataagtggtatggaggaaaatgaagg-gggtcagtggaatagggcatgCATGCTTCAGGGCTGGGGCTAAATA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5757808 316 - 180051392 ctcagcctcctgagtagctgggattacaggtatgtgccaccatgcccggctaagtttgta-------tttttagtagagatggggtttctccatgttggtcaga-caggtctcgaactcccaacctcaggtgat----ccacctcagcctcccaaagtgttgggattacaggcgtgagccacctcacctgggcctgtcattattcttatattatgtgagaggttaaagacaacaagcaaac-----agatacttgtgagatggtaataagtggtatggaggaaaatgaagc-gggtaagtgggatacg----gcatgctTCAGGGCTGGGGCTAAATA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5944271 320 - 181584905 ctcagcctcctgagtagctgggattacaggtatgtgccaccatgcccggctaagtttgta-------tttttagtagagatggcgtttctccatgttggtcaga-caggtctcgaactcccaacctcaggtgatccacccacctcagcctcccaaagtgttgggattacaggcgtgagccacctcacctgggcctgtcattattcttatattatgtgagaggttaaagacaacaagcaaac-----agatacttgtgagatggtaataagtggtatggaggaaaatgaagc-gggtaagtgggatacg----gcatgctTCAGGGCTGGGGCTAAATA i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 974640 320 - 16193990 ctcagcctcctgagtagctgggattacaggtatgtgccaccatgcccggctaagtttgta-------tttttagtagagatggggtttctccatgttggtcaga-caggtctcgaactcccaacctcaggtgatccacccacctcagcctcccaaagtgttgggattacaggcgtgagccacctcacctgggcctgtcattattcttatattatgtgagaggttaaagacaacaagcaaac-----agatacttgtgagatggtaataagtggtatggaggaaaatgaagc-gggtaagtgggatacg----gcatgctTCAGGGCTGGGGCTAAATA i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1795819 320 - 21434487 ctcagcctcctgagtagctgggattacaggtatgtgccaccatgcccggctaagtttgta-------tttttaggagagatggggtttctccatgttggtcaga-caggtcttgaactcccaacctcaggtgatccacccacctcagcctcccaaagtgttgggattacaggcgtgagccacctcacctgggcctgtcattattcttatattatgtgggaggttaaagacaacaaacaaac-----agatacttgtgagatggtgataagtggtatggaggaaaatgaagc-gggtaagtgggatacg----gcatgctTCAGGGCTGGGGCTAAATA i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4758352 320 - 82825804 ctcagcctcctgagtagctgggattacaggtatgtgccaccatgcccggctaaggttgta-------tttttagtagagatggggtttctccatgttggtcaga-ctggtctcgaactcccaacctcaggtgatccacccgcctcagcctcccaaagtgttgggattacaggcgtgagccaccgcacctgggcctgtcattattcttatattatgtgagaggttaaagacaacaagcaaac-----agatacttgtgagatggtgataagtggtacggaggaaaatgaagc-aggtaagtgggatagg----gcatgCATCAGGGCTGGGGCTAAATA i chlSab2.chr23 C 0 C 0 s colAng1.NW_012115755v1 1745739 317 - 2415367 ctcagcctcctgagtagctgggattacgggcatgtgccaccacacccagctaattttgta-------tttttagtagagatggggtttctccatgttggtcaga-ctggtctcgaactcccaacctcaggtgatgcacccgcctcagcctcccaaagtgttgggattacaggtgtgagtcaccgcacctgggcctgtcattattcttatattatgtgggaggttaaagacaataagcaaac-----agatacttgtgagatggtgataa---gtacggaggaaaatgaagg-gggtaagtgggagagg----gcatgctTCAGGGCTCGCGCTAAATA i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64088755 332 + 204313951 cttagcttcctgagtagctaggattacaggcatgcgccaccatgccctgctaattttgtatatattttttcaagtagagatgtggtttcaccatgttggtcagg-ctggtctcaaactcctgacctcaggtgatccacctgccttggccttccaaagtgctgggattacaggcatgaaccaccgtgcctggccctgtcattattcttatattctgtgggatgataaagatgataagcaaatttgcgagatatttgtgagatggtgataagtggtatggaggaaaacgaagt-ggggaggtggggtagg----gcatgctTCAGGGCTCGGGCTAAATA i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2214417 333 + 10068113 ctcggcttcctgagtagctaggattacaggcatgcaccaccatgccctgctaattttgtatatattttttcaagtagagatgtggtttcaccatgttggtcaggcctggtcttaaactcctgacctcagttgatccacctgccttggccttccaaagtgctgggattacaggcgtgagccactgtgcctggccctgtcattattcctatattctgtgggatggtaaagataataagcaaatttgtgagatatttgtgagatggtgataagcggtacggaggaaaatgaagt-ggggaggtggggtaga----gCATACTTCAGGGCTCGGGCTAAATA i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 69723 332 - 709587 ctcagcttcctgagcagccaggattacaggcgtgcaccaccatgccctgctaattttgtatatattttttcaagtagatacgtggtttcaccatgttggtcagg-ctggtctcaaactcctgacctcagttgatccacctgacttggccttccaaagtgctgggattacaggcatgagccactgtgcctggccctgtcattattcttatattctgtgggataataaagataataagcaaatttgtgagatatttgtgagatggtgataagtggtacagaggaaaatgaagt-ggggaggtggggcagg----gcatgctTCAGGGCTCGGGCTAAATA i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1170042 324 - 2246441 ctcagcttcctgagtagctaggattacaggcatgcaccactatgccctgctaattttgtttattttttttcaagtagagatgtggtttcaccatgttggtcagg-ctggtctcaaactcctgaccttagttgatccacctgccttggacttccaaagcgctgggattacaggcgtga--------gcctggccctgtcatgattcttatattctgtgggatgataaggataataagcaaatctgtgagatatttgtgagatggtggtaagtggtacagaggaaaatgaagt-ggggagggggggtagg----gcgtgctTCAGGGCTCAGGCTAAATA i aotNan1.NW_018501968v1 C 0 C 0 e mm10.chr13 65988038 2637 - 120421639 I e otoGar3.GL873522 1238345 2392 + 48283576 I e canFam3.chr4 37171831 379 + 88276631 I e proCoq1.NW_012152163v1 767590 6023 - 940639 I e dasNov3.JH562710 254081 55559 - 960158 T e manLeu1.NW_012103943v1 264049 492 + 2521317 I a score=1416324.000000 s hg38.chr5_KI270795v1_alt 58414 179 + 131892 ttttagtgtattcacagagt--tgtaccgtcatcaccactgtccattttaaagcatattgattacctcaaaaagaaaccccatt-cttttaggcatta-ccc----aagcccca-taataacccctccacttctgccctaagaaactacttattt-----ctgtctctccat--ggattagcctattctggatgt s panTro5.chr5 5308611 179 - 181907262 Gtttagtatcttcacagagt--tgtaccgtcatcaccactgtccattttaaagcatattgattacctcaaaaagaaaccccatt-cttttaggcatta-ccc----aagcccca-taataagccctccacttctgccctaagaaactacttattt-----ctgtctctccat--ggattagcctattctggatgt i panTro5.chr5 C 0 C 0 s panPan2.chr5 5571155 179 - 183735486 ttttagtatattcacagagt--tgtaccgtcatcaccactgtccattttaaagcatattgattacctcaaaaagaaaccccatt-cttttaggcatta-ccc----aagcccca-taataagccctccacttctgccctaagaaactacttattt-----ctgtctctccat--ggattagcctattctggatgt i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1701091 179 + 3967317 ttttagtatactcacagagt--tgtacagtcatcaccactgtccattttaaagcatattgattacctcaaaaagaaaccccatt-cttttaggcatta-ccc----aagcccca-taataacccctccacttctgccctaagaaactacttattt-----ctgtctctccat--ggattagcctattctggatgt i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4577732 179 + 163208435 ttttagtatattcacagagt--tgtacagtcattaccactgtccattttaaagcatattcattacctcgaaaagaaaccccgtt-cttttaggcatta-ccc----aagccccg-taataacccctccactcctgccctaagcaactacttattt-----ctgtctctctct--ggattagcctattctggacgt i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5758124 155 - 180051392 ttttagtatattcacagagt--tgtacagtcatcaccaccacccattttaaagcatattccttacctcaaaaagaaaccccatt-cttttaggcatca-tcc----aagccccattaataacccctccactcctgccctaagcaactgcttat--------------------------------ttctggacac i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5944591 154 - 181584905 ttttagtatattcacagagt--tgtacagtcatcaccaccacccattttaaagcatattccttacctcaaaaagaaaccccatt-cttttaggcatca-tcc----aagcccca-taataacccctccactcctgccctaagcaactgcttat--------------------------------ttctggacac i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 974960 154 - 16193990 ttttagtatattcacagagt--tgtacagtcatcaccaccacccattttaaagcatattccttacctcaaaaagaaaccccatt-cttttaggcatca-tcc----aagcccca-taataacccctccactcctgccctaagcaactgcttat--------------------------------ttctggacac i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1796139 154 - 21434487 ttttagtatattcacagagt--tgtacagtcatcaccaccgcccattttaaagcatattccttacctcaaaaagaaaccccatt-cttttaggcatca-tcc----aagcccca-taataacccccccattcctgccctaagcaactacttat--------------------------------ttctggacac i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4758672 154 - 82825804 ttttggtacattcacagagt--tgtacagtcatcaccaccacctattttaaagcatattccttacctcaaaaagaaaccccatt-cttttaggcatca-tcc----aagcccca-taataacccctccactcctgccctaagcaactgcttat--------------------------------ttctggacac i chlSab2.chr23 C 0 C 0 s colAng1.NW_012115755v1 1746056 154 - 2415367 ttttagtatattcacagagt--tgtacagtcatcaccaccacccattttaaagcatattccttacctcaaaaagaaaccccatt-cttttaggcatca-tcc----aagcccta-taataacccctccactcctgccctaagcaactacttat--------------------------------ttctggacac i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64089087 180 + 204313951 Ctttagcatattcacagagc--tgtacagtcatcaccaccatccattttaaagcatattcattacctcaaagagaaaccccatt-cttttaggtatcactcc----aagcccca-taataacccctctgcttctgccctaagcaactacttattt-----ctgtctctctat--aaattagcctattctggacat i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2214750 182 + 10068113 Ctttagcatattcacagagtcgcgtacagtcatcaccaccgtccattttaaagcatattcattacctcaaagagaaaccccatt-cttttaggtatcactcc----aagcccca-taataatccctctgctcctgccctaagcaactacttattt-----ctgtctctctat--ggattagcctatgctggacat i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 70055 160 - 709587 Ctttagcatattcacagagt--tgtacagtcatcaccaccgtccattttaaagcatattcattccctcaaagagaaaccccatt-cttttaggtatcactcc----aagccccg-aagtaacccctctgctcctgccctaagcaactacttattt---------------------------ctctgctggacat i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1170366 180 - 2246441 Ctttagcacattcacagagt--tgtacagtcatcaccaccgaccgttttaaagcatattcattacctcaaagagaaaccccagt-cttttaggtatcactcc----aagcccca-taataacccctctgctcctgccctaagcaactacttactt-----ctgtctctctat--ggattggcctattctgtacat i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1240737 171 + 48283576 ttttagtacattcacagagt--tgtacaattatttccacagtccattttaaaaca------tcacctcagaaagaaactc-----atttcacccccta-tcc-------cccca-tcacagcctcttcaccccaagcctaagcaactgcttatttgctttctgtctctatat--ggatcagcccattctggaaat i otoGar3.GL873522 I 2392 C 0 s canFam3.chr4 37172210 177 + 88276631 ttttagtatattcaaagagc--t--------atctccacagtccatttcgaaacattttcatcacctc------aaactatattgactttagctatca-ccccacaactcctca-ggatgcccttcttcctcctggcctaagcaaccactaatctactttctttctctatatagggattcgcttattctggacat i canFam3.chr4 I 379 C 0 e mm10.chr13 65988038 2637 - 120421639 I e proCoq1.NW_012152163v1 767590 6023 - 940639 I e dasNov3.JH562710 254081 55559 - 960158 T e manLeu1.NW_012103943v1 264049 492 + 2521317 I a score=241926.000000 s hg38.chr5_KI270795v1_alt 58593 22 + 131892 ctcata-aaatgcaatcatgtaa s panTro5.chr5 5308790 22 - 181907262 ctcata-aaatgcaatcatgtaa i panTro5.chr5 C 0 C 0 s panPan2.chr5 5571334 22 - 183735486 ctcata-aaatgcaatcatgtaa i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1701270 22 + 3967317 ctcata-aaatgcaatcatgtaa i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4577911 22 + 163208435 ctcata-aaatgcaatcatgtaa i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5758279 22 - 180051392 ctcata-aaatgcaatcatataa i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5944745 22 - 181584905 ctcata-aaatgcaatcatataa i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 975114 22 - 16193990 ctcata-aaatgcaatcatataa i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1796293 22 - 21434487 ctcata-aaatgcaatcatataa i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4758826 22 - 82825804 ctcata-aaatgcaatcatataa i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 264541 22 + 2521317 ctcata-aaatgcaatcatataa i manLeu1.NW_012103943v1 I 492 C 0 s colAng1.NW_012115755v1 1746210 22 - 2415367 ctcata-aagtgcaatcatataa i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64089267 22 + 204313951 ctcaga-aaatggaatcatataa i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2214932 22 + 10068113 ctaata-aaatggaatcatgtaa i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 70215 22 - 709587 ctcata-agatggaatcatataa i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1170546 22 - 2246441 ctcgta-aaatggaatcatataa i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1240908 23 + 48283576 tccatacaaatggaatcacataa i otoGar3.GL873522 C 0 C 0 s canFam3.chr4 37172387 22 + 88276631 ttcatataaatggaatcatatg- i canFam3.chr4 C 0 C 0 e mm10.chr13 65988038 2637 - 120421639 I e proCoq1.NW_012152163v1 767590 6023 - 940639 I e dasNov3.JH562710 254081 55559 - 960158 T a score=2639630.000000 s hg38.chr5_KI270795v1_alt 58615 229 + 131892 tctgtagtcttttgt---gacttgaagcttcttcgtatagtctgggtataagagttttaaaaatctgatagacagtttgcaaatatgttctctcaagtctgtgggttttgatttccttctcttagcaacatcttttgaagagcagga--------ttttgacgaag------------------tcgaatttatcaactttttc--tttcatgggtcattcttctagtgttatagctaaaaaaaaactctgcctaatcta s panTro5.chr5 5308812 228 - 181907262 tctgtagtctcttgt---gacttgaagcttcttcgtatagtctggatataagagttttaaaaatctgatagacagtttgcaaatatgttctctcaagtctgtgggttttgatttccttctcttagcaacatcttttgaagagcagga--------ttttgacgaag------------------tccaatttatcaacttgttc--ttttatgggtcattcttctagtgttatagctaaaaaaaa-ctctgcctaatcta i panTro5.chr5 C 0 C 0 s panPan2.chr5 5571356 228 - 183735486 tctgtagtctcttgt---gacttgaagcttcttcgtatagtctggatataagagttttaaaaatctgatagacagtttgcaaatatgttctctcaagtctgtgggttttgatttccttctcttagcaacatcttttgaagagcagga--------ttttgacgaag------------------tccaatttatcaacttgttc--ttttatgggtcattcttctagtgttatagctaaaaaaaa-ctctgcctaatcta i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1701292 228 + 3967317 tctgtagtctcttgt---gacttgaagcttcttcgtatagtctggatataagagttttaaaaatctgatagacagcttgcaaatatgttctctcaagtctgtgggttttgatttccttctcttagcaacatcttttgaagagcagga--------ttttgacgaag------------------tccaatttatcaactttttc--ttttatgggtcattcttctagtgttatagctaaaaaaat-ctctgcctaatctg i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4577933 228 + 163208435 tctgtagtcttttgt---gacttgaagcttctccatatagtctggatataagagttttaaaaatttgatatatagtttgcagatatgttctctcaagtctgtgggttctgatttccttctcttagcaacatcttttgaagagcagaa--------ttttgacgaag------------------tccaatttatcaactttttc--ttttatgggtcattcttctagtgttatagctgaaaaaat-ctctgcctaatcta i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5758301 245 - 180051392 tctgtagtcttttgt---gacttgaagcttcttcatacagtctggatataagagttttaaaaatctgatatacagtttgcaaatatgttctctcaagtctgtgggttttgatttcctcctcttagcagcatctcttgaagagcagaa--------ttttggtgaagaacagaattttgatgaactccaattgatcagctttttc--ctttatgggtccttcttctagtgttatagct-aagaaat-ctctgcctaatcta i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5944767 245 - 181584905 tctgtagtcttttgt---gacttgaagcttcttcatacagtctggatataagagttttaaaaatctgatatacagtttgcaaatatgttctctcaagtctgtgggttttgatttcctcctcttagcagcatctcttgaagagcagaa--------ttttggtgaagaacagaattttgatgaactccaattgatcaactttttc--ctttatgggtccttcttctagtgttatagct-aagaaat-ctctgcctaatcta i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 975136 245 - 16193990 tctgtagtcttttgt---gacttgaagcttcttcatacagtctggatataagagttttaaaaatctgatatacagtttgcaaatatgttctctcaagtctgggggttttgatttcctcctcttagcagcatctcttgaagagcagaa--------ttttggtgaagagcagaattttgatgaactccaattgatcaactttttc--ttttatgggtccttcttctagtgttatagct-aagaaat-ctctgcctaatcta i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1796315 245 - 21434487 tctgtagtcttttgt---gacttgaagcttcttcatacagtctggatataagagttttaaaaatctgatatacagtttgcaaatatgttctctcaagtctgtgggttttgatttcctcctcttagcagcatctcttgaagagcagaa--------ttttggtgaagagcagaattttgatgaactccaattgatcaactttttt--ctttatgggtccttcttctagtgttatagct-aagaaat-ctctgcctaatcta i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4758848 245 - 82825804 tctgtagtcttttgt---gacttgaagcttcttcatacagtctggatataagagttttaaaaatctgatatacagtttgcaaatatgttctctcaagtctgtgggttttgatttcctcctcttagcagcatcttttgaagagcagaa--------ttttggtgaagagcagaattttgatgaactccaattgaacaactttttc--ctttgtgggtccttcttctagtgttagagct-aagaaat-ctctgcctaatctt i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 264563 245 + 2521317 tctgtagtcttttgt---gacttgaagcttcttcatacagtctggatataagagttttaaaaatctgatatacagtttgcaaatatgttctctcaagtctgtgggttttgatttcctcctcttagcagcatctcttgaagagcagaa--------ttttggtgaagagcagaattttgatgaactccaattgatcaactttttt--ctttatgggtccttcttctagtgttatagct-aagaaat-ctctgcctaatcta i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1746232 245 - 2415367 tctgtagtcttttgt---gacttgaagcttcttcatacagtctggatataagagttttaaaaatctgatatacagtttgcaaatatgttctctcaagtctgtgggttttgatttcctcctcttagcaacatcttttgaagagcagaa--------ttttggtgaagagcagaattttgatgaactccaattgatcaactttttc--ctttatgggtccttcttctagtgttatagct-aaaaaat-ctctgcctaatcta i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64089289 227 + 204313951 tctgtagtcttttgt---gacttgaagcttcttcatagaatctggatataagattttaaaaaatctgatagacagtttgcaaatatgttctcttgagtctgtggattttaatttccttctcttagcaatatcttttgaagaacagaa--------ttttgatgaag------------------tccaattgatcaactttttc--ctttttgggtcattcttctagtgttatagct-aagaaag-ctgtccctaatcta i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2214954 226 + 10068113 tctgtagccttttgt---gacttgaaacttcttcatatagtctggatataagatttttaaaaatctgatatgcagtttgcaaatacgttctctcaagtctgtgggttttgattgccttctcttagcaatatcttttgaagaatagaa--------ttttgatgagg------------------tccaa-taatcaactttttc--ttttttgggtcattcttctagtgttatagct-aagaatg-ctgtccctaatcta i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 70237 227 - 709587 tctgtagtcttttgt---gacttgaagcttcttcatatagtctagatataagatttttaaaaatctgatataccgtttgcaaatatgttctctcaagtctgtgggttttgagttccttctcttagcaatatcttttgaagaacggaa--------ttttgatgaag------------------tccagttgatcaactttttc--ttttttgggtcattcttctagtgttatagct-aagaagg-ctgtccctaatcta i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1170568 227 - 2246441 tctgtagtcttttgt---gacttgaagcttcttcagatagtctggatataagatttttaaaaatctgatatgtagtttgcaaatatgttctctcaagtctgtgggttttgattgccttctcttagcaatatcttttgaagaacagaa--------tttcgatgaag------------------tccaattgatcaactttttc--ttttttgggccattcttctagtgttatagct-aagaagg-ctgtccctaatcta i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1240931 232 + 48283576 tctgtggtcttttgt---gacttggaggttctttatatagtctggatatacattttttaaaatttacatttaatatttgcaaatatgttct---aagcctgtggcttttgattttattctcttaatagtgtcttttgaagaacagaaactcttagttttgatgaaa------------------tcaaatttatcaactttttc--ttttatgggtcattcttttagtgttgtatct-aagaaat-tcttgcctaaccca i otoGar3.GL873522 C 0 C 0 s canFam3.chr4 37172409 219 + 88276631 -----tgaccttAAA---GACttgagggttctatatatggcctggataca-tattgttttaagtcagatatatgatttgcaaacatattctcccaagtatgtagtcttta----tattctcttaacagtgtcttttgaagagtagaaattcttaattttcatggtg------------------tccaatttaccaactttact-------tgaatcattctttta-tgttataccc-aagaaat-ctttgcctaaccaa i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 198522 234 - 960158 tttgtgctcttttattgagttttgagagttctttatatattctgcattca----tttcctctatcaaatatgtgatttgtaaatat-ttctagc-agtctgtggtttatgttctcattctctcaacagtctcttttgatgaacagaagttcttaattttgatgaat------------------tccagttcatcacattttaaaaatttatgggttgtacttttggtattataact-ctaaaac-ctttgcctaaccca i dasNov3.JH562710 T 55559 C 0 e mm10.chr13 65988038 2637 - 120421639 I e proCoq1.NW_012152163v1 767590 6023 - 940639 I a score=308055.000000 s hg38.chr5_KI270795v1_alt 58844 39 + 131892 tgatcacaaagat--ttccccctatgtcta----------tgtcttcCTTT- s panTro5.chr5 5309040 39 - 181907262 tgatcacaaagat--ttccccctatgtctg----------cgtctTCCTTT- i panTro5.chr5 C 0 C 0 s panPan2.chr5 5571584 39 - 183735486 tgatcacaaagat--ttccccctatgtctg----------cgtctTCCTTT- i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1701520 39 + 3967317 tgatcacaaagat--ttccccctatgtcta----------tgtctTCCTTT- i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4578161 39 + 163208435 tgatcacaaagat--ttcccactacgtctg----------catctTCCTTT- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5758546 33 - 180051392 tggtcagaaggat--ttcccccta----------------cgttttctttt- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5945012 33 - 181584905 tggtcagaaggat--ttcccccta----------------cgttttctttt- i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 975381 33 - 16193990 tggtcagaaggat--ttcccccta----------------cgttttctttt- i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1796560 33 - 21434487 tggtcagaaggat--ttcccccta----------------cgttttctttt- i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4759093 33 - 82825804 tggtcacaaggat--ttcccccta----------------cgttttctttt- i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 264808 33 + 2521317 tggtcagaaggat--ttcccccta----------------cgttttctttt- i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1746477 33 - 2415367 tggtcacaaggat--ttctcccta----------------cgttttctttt- i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64089516 31 + 204313951 tgatcacaaggat--ttccctc------------------tgttttctttt- i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2215180 31 + 10068113 tgatcacaaagat--tcccctc------------------tgttttctttt- i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 70464 31 - 709587 tgatcaaaaagat--ttccctc------------------tgttttctttt- i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1170795 31 - 2246441 tgatcacaaagat--ttccctc------------------tgttttctttt- i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1241163 24 + 48283576 tgatcacaaagat---------------------------tttttATTTTT- i otoGar3.GL873522 C 0 C 0 s mm10.chr13 65990675 35 - 120421639 TGACCACAATAGCGATTTCTCCTA----------------TTTTTTTTTTT- i mm10.chr13 I 2637 C 0 s canFam3.chr4 37172628 49 + 88276631 tgatcataaaggt--tttctcctatgtttgctcacagtttttttttctttt- i canFam3.chr4 C 0 I 123 s dasNov3.JH562710 198756 34 - 960158 cggtcagaaggat--tctctcctg----------------tgtttttgtcaa i dasNov3.JH562710 C 0 C 0 e proCoq1.NW_012152163v1 767590 6023 - 940639 I a score=1474423.000000 s hg38.chr5_KI270795v1_alt 58883 161 + 131892 AAAGGTA----------------------------------TTTTTTTCTAAAGAGAGACCAGAAATCTGTTTTCTATGTGCGACGTCTCAATTTGTAAGATTA-AAACGAAACACATTAAA-------------AAAG----CAAACAGACATGTATATGGGCTAGAAAAGGGCCATAGACTATCAGTTCTCATATAT-T----AGTTTATATTGc-a s panTro5.chr5 5309079 165 - 181907262 AAAGGTA----------------------------------TTTTTTTCTAAAGAGAGACCAGAAATCTGTTTTCTATGTGTGACATCTCAATTTGTAAGATTA-AAATGAAACACATTAAA-------------AAAA----CAAACAGACATGTATATGGGCTAGAAAAGGGCCATAGACTATCAGTTCTCATATAT-TTAttagtttatactgc-a i panTro5.chr5 C 0 C 0 s panPan2.chr5 5571623 157 - 183735486 AAAGGTA----------------------------------TTTTTTTCTGAAGAGAGACCAGAAATCTGTTTTCTATGTGTGACGTCTCAATTTGTAAGATTA-AAATGAAACACATTAAA-------------A--------AAACAGACATGTATATGGGCTAGAAAAGGGCCATAGACTATCAGTTCTCATATAT-T----AGTTTATATTGc-a i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1701559 161 + 3967317 AAAGGTA----------------------------------TTTTTTTCTAAAGAGAGACCAGAAATCTGTTTTCTATGTGCGACGTCTCAATTTGTAAGATTA-AAATGAAACACATTAAA-------------AAAA----CAGACAGACATGTATATGGGCTAGAAAAGGGCCATAGACTATCAGCTCTCATATAT-T----AGTTTATATTGc-a i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4578200 158 + 163208435 AAAGGTA----------------------------------TTTTTTTCTAAAGAGAGACCAGAAATCTGTTTTCTATGTGCGACGTCTCAATTTGTAAGATTA-AAATGAAACACATTAAA-------------AA-------AAACAGACATGTATATGGGCTAGAAAAGGGTCATAGACTATCAGTTCTCATATAT-T----AGTTTATATTGc-a i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5758579 174 - 180051392 aaaggta-------------------------------ttTTTTTTTTTTAAAGAGAGACGAGAAATCTGTATTCTATGTGCGACATCTCCATTGGTAAGATTA-GAATGAAACACGTTAAAAACACGTGGG---AAAA----AAAAAAGACATGTATATGGGCTAGAAAAGGGCCATAGACTCTCAGTTCTCATATAT-T----AGTTTATGCTGc-a i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5945045 172 - 181584905 aaaggta---------------------------------ttttttttttaAAGAGAGACGAGAAATCTGTATTCTATGTGCGACATCTCCATTGGTAAGATTA-AAATGAAACACGTTAAAAACACGTGGG---AAAA----AAAAAAGACATGTATATGGGCTAGAAAAGGGCCATAGACTCTCAGTTCTCATATAT-T----AGTTTATGCTGc-a i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 975414 174 - 16193990 aaaggta-------------------------------ttttttttttTTAAAGAGAGACGAGAAATCTGTATTCTATGTGCGACATCTCCATTGGTAAGATTA-AAATGAAACACGTTAAAAACACGTGGG---AAAA----AAAAAAGACATGTATATGGGCTAGAAAAGGGCCATAGACTCTCAGTTCTCATATAT-T----AGTTTATGCTGc-a i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1796593 168 - 21434487 a----------------------------------------TTTTTTTTTAAAGAGAGACGAGAAATCTGTATTCTATGTGCGACGTCTCCATTGGTAAGATTA-AAATGAAACACGTTAAAAACACGTGGGAAAAAAA----AAAAAAGACATGTATATGGGCTAGAAAAGGGCCATAGACTCTCAGTTCTCATATAT-T----AGTTTATGCTGc-a i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4759126 171 - 82825804 aaaggta----------------------------------ttttttttaAAAGAGAGACGAGAAATCTGTATTCTATGTGCAACGTCTCCATTTGTAAGATTA-AAATGAAACACGTTAAAAACACGTGGG---AAAA----AAAAAAGATATGTGTATGGGCTAGAAAAGGGCCATAGACTCTCAGTTCTCATATAt-t----agtttatactgc-a i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 264841 164 + 2521317 a-----------------------------------------TTTTTTTTAAAGAGAGACGAGAAATCTGTATTCTATGTGCGACGTCTCCATTGGTAAGATTA-AAATGAAACACGTTAAAAACACGTGGG---AAAA----AAAAAAGACATGTATATGGGCTAGAAAAGGGCCATAGACTCTCAGTTCTCATATAT-T----AGTTTATGCTGc-a i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1746510 153 - 2415367 aaaggta---------------------------------ttTTTTTTCTAAAGAAAGATGAGAAATCTGTATTCTATGTGTGACGTCTCCATTTGTAAGATTA-AAATGAAACACGT-----------------TAGA----AAAACAGACATGTATATGGGCTAGAAAAGGGCCATAGACTCTCAGTTCTCA------T----AGTTTATACTGc-a i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64089547 158 + 204313951 aaaggta----------------------------------tttttttctaaagagagaccagaaatctgttttccatgtgaaa-atcccaatttgtaagatta-aaataaagcatgttaaa-------------aaat------atcagacatgtatatgggctagaaaagggccataggctatcagttCTCATATAt-t----agtttatattac-a i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2215211 159 + 10068113 aaaggta---------------------------------ttTtttttctaaagagagaccagaaatctgttttccatgtgaaacgtcccaatttgtaagatta-aaataaaacatgttaaa-------------aaa-------atcagatatgtatacgggctagaaaaggaccataggctatcagttCTCATATAT-T----AGTTTATATTGc-a i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 70495 155 - 709587 aaaggta----------------------------------tttttttctaaagagagaccagaaatctgttttccatgtgaaacgtcccaatttgtaagatta-aaataaaacatgttaaa-------------aaaa------atcaga----tatatgggctagaaaagggccataggctgtcagttCTCATATAT-T----AGTTTATATTGc-a i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1170826 147 - 2246441 aaagata----------------------------------tttttttctaaagagagaccagaaatctgttttccatgtgaaacgtcccaatttgtaagaTTA-AAATAAAACATGTTAAA-------------AAAA-----CATCAGA------------CTAGAAAAGGGCCATAGACTATC-GTTCTCACATAT-T----AATTTATATTGc-a i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1241187 132 + 48283576 AAAGGTA----------------------------------TTTTTTTCTAAAGAGAGAC-AGTAATTTATTTTCCTTAT------TTTCCAT--------TTA-AAATAA---GTTTTAAA-------------AAAA----CTAAAAGT------------CTGGAAAAAGTCTATAGGCTATTGGTTCTAACTTACAG----AGGTTCTACTGG-a i otoGar3.GL873522 C 0 C 0 s mm10.chr13 65990710 106 - 120421639 AACTGTCAAA----------------------------GATTTTCTTTTTAAAGAGATACTAGAAATG----------------------AATTTTTAATAGTA--AATAAAACATGTT--------------------------------------------------------TATAGGCCCTCGGTTTCTACCTAT-T----AGTTTATAGTGCAA i mm10.chr13 C 0 C 0 s canFam3.chr4 37172800 200 + 88276631 gaaggcagtactaaacagctgagccacccaggctgcccAGTTTTTTTTCTAAAGAGAGGCCAGAAGTCTGCTTTTCATCTGAATAATCTCAATTTGTGTTTTTAAAAATAAAACATGTCAAA-------------AAAAATAAAAATAAAACATGTCTATGGGCTAGAAAAGGACCACAGGCTACCAGCGTTCATGCAT-T----AGTTTATATTAT-A i canFam3.chr4 I 123 C 0 s dasNov3.JH562710 198790 100 - 960158 aaacttt----------------------------------ttttcttttaAAGAGAAGGAAGAAATTTGCTTTGCATGTG------------------------AAATGCCTCACTTCAGA-------------------------------------------------------TAGGCTACCAATTTTCATATAC-T----AGTTTATATTAT-A i dasNov3.JH562710 C 0 I 1373 e proCoq1.NW_012152163v1 767590 6023 - 940639 I a score=876965.000000 s hg38.chr5_KI270795v1_alt 59044 81 + 131892 tgcaaaattgc------------------------------------ttatatttggcca-tttttgatct----ataaaaacagc--agtttcatG---------CTA---------ATGGCCTTTGTAGG---TTAAGTTGTA s panTro5.chr5 5309244 81 - 181907262 tggaaaattgc------------------------------------ttatatttggcca-tttttgatct----ataaaaacagc--agtttcatG---------CTA---------ATGGCCTTTGTAGG---TTAAGCTGTA i panTro5.chr5 C 0 C 0 s panPan2.chr5 5571780 81 - 183735486 tgcaaaattgc------------------------------------ttatatttggcca-tttttgatct----ataaaaacagc--agtttcatG---------CTA---------ATGGCCTTTGTAGG---TTAAGCTGTA i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1701720 81 + 3967317 tgcaaaattgc------------------------------------ttatatttggcca-tttttgatct----ataaaaacagc--agtttcatG---------CTA---------ATGGCCTTTATAGG---TTAAGTTGTA i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4578358 84 + 163208435 tgcaaaattgc------------------------------------ttatatttggcca-tttttgatct----ataaaaacagc--agtttcatG---------CTA---------ATGGCCTTTGTAGGTTATTAAGTTGTA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5758753 85 - 180051392 tgcaaaattgc------------------------------------ttatatttggccattttttgatct----ataaaaacagc--agtttcatG---------CTG---------ATGGCCTTTGCAGGTTGTTAAGTTGTA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5945217 85 - 181584905 tgcaaaattgc------------------------------------ttatatttggccattttttgatct----ataaaaacagc--agtttcatG---------CTG---------ATGGCCTTTGCAGGTTGTTAAGTTGTA i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 975588 85 - 16193990 tgcaaaattgc------------------------------------ttatatttggccattttttgatct----ataaaaacagc--agtttcatG---------CTG---------ATGGCCTTTGCAGGTTGTTAAGTTGTA i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1796761 85 - 21434487 tgcaaaattgc------------------------------------ttatatttggccattttttgatct----ataaaaacagc--agtttcatG---------CTG---------ATGGCCTTTGCAGGTTATTAAGTTGTA i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4759297 85 - 82825804 tgcaaaattgc------------------------------------ttatatttggccattttttgatct----ataaaaacagc--agtttcatG---------CTG---------ATGGCCTTTGCAGGTTATTAAGTTGTA i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 265005 85 + 2521317 tgcaaaattgc------------------------------------ttatatttggccattttttgatct----ataaaaacagc--agtttcgtG---------CTG---------ATGGCCTTTGCAGGTTATTAAGTTGTA i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1746663 85 - 2415367 tgcaaaattgc------------------------------------ttatatttggccattttttgatcc----ataaaaacagc--agtttcatG---------CTG---------ATGGCCTTTGCAGGTTATTAAGTTGTA i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64089705 84 + 204313951 tgcaaaattgc------------------------------------ttatatttggcca-tttttgatct----ataaaaatggc--agtttcatG---------CTA---------ACGGCCTTTGCAGGTTATTAAGTTGTA i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2215370 83 + 10068113 tgcaaaattgc------------------------------------tcatatttggcca--ttttgatct----ataaaaatggc--agtttcatG---------CTA---------ACAGCCTTTGCAGGTTATTAAGTTGCA i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 70650 84 - 709587 tgcaaaattgc------------------------------------ttatatttggcca-tttttgatct----ataaaaatggc--agtttcatG---------CTA---------ACAGCCTTTGCAGGTTATTAAGTTGTA i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1170973 84 - 2246441 tgcaaaattgc------------------------------------ttatatttggcca-tttttgatct----ataaaaatggc--agtttcatG---------CTA---------ATGGCCTTTGCAGGTTATTAAGTTGTA i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1241319 70 + 48283576 t------------------------------------------------atatttaacta--ttcaaacattgtgataaacatagcaaaaactcatg---------ctt---------gtg----ttgta---tactaaatttta i otoGar3.GL873522 C 0 I 1811 s mm10.chr13 65990816 92 - 120421639 TAAAGATTTGG------------------------------------CCATACTTGGTCC-TTTTTGAACT----ATAAAATCAG---ATATTCATG---------TTGTTGAAGTTCATGCTCTTTGCCAGTTACTAAATTACC i mm10.chr13 C 0 C 0 s canFam3.chr4 37173000 129 + 88276631 TGCAAAATTACATTGTATATAATATGCAATATATTGCAAATATATGGTTATATTTGGCTG-TTTTTGATCT----ATTAAAACAGG--GGTTTCATATGTTTCAACTGA---------ATGCTCTTTGCACATTGCTAAATTACA i canFam3.chr4 C 0 C 0 e proCoq1.NW_012152163v1 767590 6023 - 940639 I e dasNov3.JH562710 198890 1373 - 960158 I a score=249735.000000 s hg38.chr5_KI270795v1_alt 59125 30 + 131892 GGTAATCCAAGTGAGTCACAGGTGTGCATG- s panTro5.chr5 5309325 30 - 181907262 GGTAATCCAAGTGAGTCACAGGTGTGCATG- i panTro5.chr5 C 0 C 0 s panPan2.chr5 5571861 30 - 183735486 GGTAATCCAAGTGAGTCACAGGTGTGCATG- i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1701801 30 + 3967317 GGTAATCCAAGTGAGTCACAGGTGTGCATG- i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4578442 30 + 163208435 GGTAATCCAAGTGAGTCACAGGTGTGCATG- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5758838 28 - 180051392 GGTAAT-CAGGTGAGTCACAAGTGTGCAT-- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5945302 28 - 181584905 GGTAAT-CAGGTGAGTCACAAGTGTGCAT-- i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 975673 28 - 16193990 GGTAAT-CAGGTGAGTCACAAGTGTGCAT-- i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1796846 28 - 21434487 GGTAAT-CAGGTGAGTCACAAGTGTGCAT-- i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4759382 28 - 82825804 GGTAAT-CAGGTGAGTCACAGGTGTGCAT-- i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 265090 28 + 2521317 GGTAAT-CAGGTGAGTCACAAGTGTGCAT-- i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1746748 28 - 2415367 GGTAAT-CAGGTGAGTCACAGGTGTGCAT-- i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64089789 28 + 204313951 GGTAAT-CAACTGAGTCACAGGTATGCAT-- i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2215453 28 + 10068113 GGTAAT-CAACTGAGTCACAGGTATGCAT-- i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 70734 28 - 709587 GGTAAT-CAACTGAGTCACAGGTATGCAT-- i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1171057 28 - 2246441 GGTAGT-CAACTGAGTCACAGGCATGCAT-- i aotNan1.NW_018501968v1 C 0 C 0 s mm10.chr13 65990908 28 - 120421639 AGCTGT-CAGCCAAGCCACAGGTATCTCT-- i mm10.chr13 C 0 C 0 s canFam3.chr4 37173129 28 + 88276631 GGCAGC-CAGCTGAGT-ACAGATGTCTGT-G i canFam3.chr4 C 0 I 14 e otoGar3.GL873522 1241389 1811 + 48283576 I e proCoq1.NW_012152163v1 767590 6023 - 940639 I e dasNov3.JH562710 198890 1373 - 960158 I a score=6720.000000 s hg38.chr5_KI270795v1_alt 59155 1 + 131892 G- s panTro5.chr5 5309355 1 - 181907262 G- i panTro5.chr5 C 0 C 0 s panPan2.chr5 5571891 1 - 183735486 G- i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1701831 1 + 3967317 G- i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4578472 1 + 163208435 G- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5758866 1 - 180051392 G- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5945330 1 - 181584905 G- i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 975701 1 - 16193990 G- i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1796874 1 - 21434487 G- i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4759410 1 - 82825804 G- i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 265118 1 + 2521317 G- i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1746776 1 - 2415367 G- i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64089817 1 + 204313951 G- i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2215481 1 + 10068113 G- i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 70762 1 - 709587 G- i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1171085 1 - 2246441 G- i aotNan1.NW_018501968v1 C 0 C 0 s mm10.chr13 65990936 2 - 120421639 GG i mm10.chr13 C 0 I 25 e otoGar3.GL873522 1241389 1811 + 48283576 I e canFam3.chr4 37173157 14 + 88276631 I e proCoq1.NW_012152163v1 767590 6023 - 940639 I e dasNov3.JH562710 198890 1373 - 960158 I a score=3834694.000000 s hg38.chr5_KI270795v1_alt 59156 385 + 131892 GTATCACCACTAAATCACtaaacacattggcctgaaactcctaaaaataaggacagtctcctgcataatcacaccaccagtatcacacctaagaagatgaaatcattccctttatcatctgtattagttatctgctgctgggtaacaaaatactccaaaacatagcatttaacaccacaaata-tttttatctcacagtgctcgatggttagaaatctgaaagcagcttagctggatggttctggctcagagtctctcatgaggttgcaataaagcttccagctgaagcagacatctccaggcttgttcagtggctgatgtctggaagcctgaggttctttctccattgcccgatctagtctacctgagcattgtcacaacgtggc s panTro5.chr5 5309356 385 - 181907262 GTATCACCACTAAATCACtaaacacattggcctgaaactcttaaaaataaggacagtctcctgcataatcacaccaccagtatcacacctaagaagatgaaatcattccctttatcatctgtattagttatctgctgctgggtaacaaaatactccaaaacatagcatttaacaccacaaata-tttttatctcacagtgcccgactgttagaaatctgaaagcagcttagctggatggttctggctcagagtctctcatgaggttgcaataaagcttccagctgaagcagacatctccaggcttgttcagtggctgatgtctggaagcctgaggttctttctccattgcccgatctagtctacctgagcattgtcacaacgtggc i panTro5.chr5 C 0 C 0 s panPan2.chr5 5571892 386 - 183735486 GTATCACCACTAAATCACtaaacacattggcctgaaactcctaaaaataaggacagtctcctgcataatcacaccaccagtatcacacctaagaagatgaaatcattccctttatcatctgtattagttatctgctgctgggtaacaaaatactccaaaacatagcatttaacaccacaaatattttttatctcacagtgcttgacggttagaaatctgaaagcagcttagctggatggttctggctcagagtctctcatgacgttgcaataaagcttccagctgaagcagacatctccaggcttgttcagtggctgatgtctggaagcctgaggttctttctccattgcccgatctagtctacctgagcattgtcacaacgtggc i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1701832 383 + 3967317 GTATCACCACTAAATCACtaaacacattggcctgaaactcctaaaaataaggacagtctcctgcatgatcacaccaccagtatcacacctaagaagatgaaatcattccctttatcatctgtattagttatctgctgctgggtaacaaaatactcc-aaacatagcatttaacaccacaaata-tttttatctcacagtgcccgactgttagaaatctgaaagcagcttagctggatggttctggctcagagtctctcatga-gttgcaataaagcttccagctgaagcagacatctccaggcttgttcagtggctgatgtctggaagcctgaggttctttctccgttgcccgatctagtctacctgagcattgtcacaacgtggc i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4578473 381 + 163208435 GTATCACCACTAAATCACTAAACACACTGGCCTGAAACtcctaaaaataaggacagtctcctgcataatcacatcaccagtatcaCACCT---AAGATGAAATCATTCCCTTTATCATCtgtattagttatctgctgctgggtaacaaaatactccaaaacgtagcatttaacaccacaaata-tttttatctcacagtgcccgactgttagaaatctgaaagcagcttagctggatggttctggctcagagtctctcacgaggttgcaataaagcttccagttgaagcagagatctcca-gcttattcagtggctgatgtctggaagcctgaggttctttctccattgcccgacctagtctacctgagcattgtcacaacatggc i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5758867 385 - 180051392 GTATCACCACTACATCACtaaatacattggcatgaaacgcctaaaaagaaggacagtcccctgcataatcacaccaccagtatcacacctaagaagatgaaatcattgcctttatcatctgtattagttatctgctgctgggtaacaaaatactccaaaacatagcatttaacaccgcaaata-tttttatctcacagtgcccgagtgttagaaatctgaaagcagcttagctggatggttctggctcagagtctctcacgaggttgcaataaagcttccagttgaagcagacatctccagacttgTTCAGTGACTGATGTCTGGAAGCCTGAGGTTTTTTCTCCATTGCTCGATGCAGTCTACCTGAGCATTGTCGCAGCAGGGC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5945331 385 - 181584905 GTATCACCACTAAATCACtaaatacattggcatgaaacgcctaaaaagaaggacagtcccctgcataatcacaccaccagtatcacacctaagaagatgaaatcattgcctttatcatctgtattagttatctgctgctgggtaacaaaatactccaaaacatagcatttaacaccgcaaata-tttttatctcacagtgcccgagtgttagaaatctgaaagcagcttagctggatggttctggctcagagtctctcacgaggttgcaataaagcttccagttgaagcagacatctccagacttgTTCAGTGACTGATGTCTGGAAGCCTGAGGTTTTTTCTCCATTGCTCGATGCAGTCTACCTGAGCATTGTCGCAGCAGGGC i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 975702 385 - 16193990 GTATCACCACTAAATCACtaaatacattggcatgaaacgcctaaaaagaaggacagtcccctgcataatcacaccaccagtatcacacctaagaagatgaaatcattgcctttatcatctgtattagttatctgctgctgggtaacaaaatactccaaaacatagcatttaacaccgcaaata-tttttatctcacagtgcccgagtgttagaaatctgaaagcagcttagctggatggttctggctcagagtctctcatgaggttgcaataaagcttccagttgaagcagacatctccagacttgTTCAGTGACTGATGTCTGGAAGCCTGAGGTTTTTTCTCCATTGCTCGATGCAGTCTACCTGAGCATTGTCGCAGCAGGGC i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1796875 382 - 21434487 GTATCACCACTAAATCACTAAATACATTGGCATGAAACACCTAAA---AAGGACAGTCTCCTGCATAATCACACCACCAGTATCACACCTAAGAAGACGAAATCATTGCCTTTATCATCtgtattagttatctgctgctgggtaacaaaatactccaaaacatagcatttaacaccacaaata-tttttatctcacagtgcccgagtgttagaaatctgaaagcagcttagctggatggttctggctcagagtctctcacgaggttgcaataaagcttccagttgaagcagacatctccagacttgTTCAGTGACTGATGTCTGGAAGCCTGAGGTTCTTTCTCCATTGCTCGATCCAGTCTACCTGAGCATTGTCGCAGCAGGGC i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4759411 385 - 82825804 GTATCACCACTAAATCACtaaatacattggcatgaaacgcctaaaaagaaggacagtctcctgcataatcacaccaccagtatcacacctaagaagatgaaatcattgcctttatcatctgtattagttatctgctgctgggtaacaaaatactccaaaacatagcatttaacaccgcaaata-tttttatctcacagtgcccgagtgttagaaatctgaaagcagcttagctggatggttctggctcagagtctctcatgaggttgcaataaagcttccagttgaagcagacatctccagacttgTTCAGTGGCTGATGTCTGGAAGCCTGAGGTTCTTTCTCCTTTGCTCGATCCAGTCTGCCTGAGCATTGTCACAGCAGGGC i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 265119 385 + 2521317 GTATCACCACTAAATCACtaaatacattggcatgaaacgcctaaaaaggaggacagtctcctgcataatcacaccaccagtatcacacctaagaagacgaaatcattgcctttatcatctgtattagttatctgctgctgggtaacaaaatactccaaaacatagcatttaacaccacagata-tttttatctcacagtgcccgagtgttagaaatctgaaagcagcttagctggatggttctggctcagagtctctcatgaggttgcaataaagcttccagttgaagcagacatctccagacttgTTCAGTGACTGATGTCTGGAAGCCTGAGGTTCTTTCTCCATTGCTTGATCCAGTCTACCTGAGCATTGTCGCAGCAGGGC i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1746777 385 - 2415367 GTATCACCACTAAATCACtaaatacattggcatgaaacgcctaaaaggaaggacagtctcctgcataatcacaccaccagtatcacacctaagaagatgaaatcattgcctttatcatctatattagttatctgctgctgggtaacaaaatactccaaaacatagcatgtaacaccacaaata-tttttatctcacagtgcccgagtgttagaaatctgaaagcagcttagctggatggttctggctcagagtctctcatgaggttgcaataaagcttccagttgaagcagacatctccagacttgTTCAGTGGCTGACGTTTGGAAGCCTGAGGTTCTTTCTCCATTGCTCGATCCAGTCTACCTGAGCATTGTCGCAGCAGGGC i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64089818 380 + 204313951 GTATCAGCACTAAATCActaaatacgttggactgaaaatcctaaaaacaaggagattctcctgcataatcacactaccagtatcaCACCT---AAGATGAAATCATTCCCTTTATCATCtgtattagttatctgctgctgggtaacaaagtactctaaaacatagcatttaacactgcaaata-tttttatctcacagtgcctgagtgttagaaatctgaaggcagcttagatagatggttctggctc--agtctctcatgaggttgcaataaaTCTTCCAGTTGAAGCAGATGTCTCCAGACTTGTTCAGTGACTGATGTGTGGAAGCCTGAGGTGCTTTCTTCATTGCCCCATTCAGTCTACCTGAGCAGTGTCATAACATGGC i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2215482 381 + 10068113 GTATCAGCACTAAATCACTAAATACATTGGACTGAAAATCCCCAAAATAAGGAGATTCTCCTGCATAATCACACTACCAG-ATCACACCT---AAGATGAAATCATTCCCTTTATCATCtgtattagttatctgcttctgggtaacaaagtactccaaaacatggcatttaacaccgcaaata-tttttatctcacagcgcctgagtgttagaaatctgaaggcagcttagctggatggttctggctctgagtctctcatgaggttgcaataaatcttccagttggagcagacgtctccagacttgTTCAGTGGCTGATGTGTGGAAGCCTGAGGTCCTTTCTTCACTGCCCCACCCAGTCTACCTGAGCATTGTCACAACGTGGC i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 70763 382 - 709587 GTATCAGCACTAAATCACTAAATACACTGGACTGAAAATCCTAAAAATAAGGAGATTCTCCTGCATAATCACACTACCAGAATCACACCT---AAGATGAAATCATTCCCTTTATCATCtgtattagttacctcctgctgggtaacaaagtactccaaaacatagcatttaacactgcaaata-tttttatctcacagtgcctgagtgttagaaatctgaaggcagcttagctggatggttctggctcagagtctctcatgaggttgcaataaatcttccagttgaagcagacgtctccaggcttgttcagtggctgatgtgtggaagcctgaggtcctttcttcattgccccatccagtctacctgagcattgtcacaacatggc i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1171086 378 - 2246441 GTATCAGCACTAAATCActaaatacattggactgaaaatcctaaaaatagggagattctcctgcataatcacactaccagtatcaCACCT---AAGATGAAATCATTCCCTTTATCATCtgtattagttatctgctgctgggtaacaaagtactccaaaacatagcatttaacaccgcaaata-tttt--tctcacagtgcctgagtgttagatatctgaaggcagcttagctggatggttctggctcagagtctctcatgaggttgcaataaatcttccagttgaagcagacgtctccagatt--ttcagtggctgatgtgtggaagcctgaggtcctttcttcattgccccatccagtctacctgagcattgtcacaacatggc i aotNan1.NW_018501968v1 C 0 C 0 e mm10.chr13 65990938 25 - 120421639 I e otoGar3.GL873522 1241389 1811 + 48283576 I e canFam3.chr4 37173157 14 + 88276631 I e proCoq1.NW_012152163v1 767590 6023 - 940639 I e dasNov3.JH562710 198890 1373 - 960158 I a score=260486.000000 s hg38.chr5_KI270795v1_alt 59541 24 + 131892 agatgccttcaccc-aaagcaaagg--- s panTro5.chr5 5309741 24 - 181907262 agatgccttcACCC-AAAGCAAAGG--- i panTro5.chr5 C 0 C 0 s panPan2.chr5 5572278 24 - 183735486 agatgccttcACCC-AAAGCAAAGG--- i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1702215 24 + 3967317 agatgccttcaccc-aaagcaaagg--- i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4578854 24 + 163208435 agatgccttcaccc-aaagcaaagg--- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5759252 24 - 180051392 AGATGCCTTCACCC-AGAGCAAAGG--- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5945716 24 - 181584905 AGATGCCTTCACCC-AAAGCAAAGG--- i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 976087 24 - 16193990 AGATGCCTTCACCC-AAAGCAAAGG--- i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1797257 24 - 21434487 AGATGCCTTCACCC-AAAGCAAAGA--- i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4759796 24 - 82825804 AGATGCCTTCACCC-AAAGCAAAGG--- i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 265504 24 + 2521317 AGATGCCTTCACCC-AAAGCAAAGG--- i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1747162 24 - 2415367 AGATGCCTTCATCC-AAAGCAAAGG--- i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64090198 24 + 204313951 AGATGCCTTCACCC-AAAGCAAAAG--- i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2215863 24 + 10068113 AGATGCCTTCACCC-GAAGCAAAAG--- i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 71145 24 - 709587 agatgccttcaccc-aaagcaaaag--- i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1171464 24 - 2246441 agatgccttcaccc-aaagcaaaag--- i aotNan1.NW_018501968v1 C 0 C 0 s dasNov3.JH562710 200263 28 - 960158 AAATGTCTTCTCCTGGGAACAGAATCCA i dasNov3.JH562710 I 1373 C 0 e mm10.chr13 65990938 25 - 120421639 I e otoGar3.GL873522 1241389 1811 + 48283576 I e canFam3.chr4 37173157 14 + 88276631 I e proCoq1.NW_012152163v1 767590 6023 - 940639 I a score=193952.000000 s hg38.chr5_KI270795v1_alt 59565 39 + 131892 atctt--------------------------------tgtgtgtttgtg------------------------tgtggtctgtttgtttatttgt---- s panTro5.chr5 5309765 39 - 181907262 ATCtt--------------------------------tgtgtgtttgtg------------------------tgtggtctgtttgtttatttgt---- i panTro5.chr5 C 0 C 0 s panPan2.chr5 5572302 39 - 183735486 ATCtt--------------------------------tgtgtgtttgtg------------------------tgtggtctgtttgtttatttgt---- i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1702239 39 + 3967317 atctt--------------------------------tgtgtgtttgtg------------------------tgtggtctgtttgtttatttgt---- i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4578878 35 + 163208435 atctt--------------------------------tgtgtgtttgtg------------------------tgtggtctgtttg----tttgt---- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5759276 67 - 180051392 ATCTTtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg------------------------tgtgGTC----TGTTTATTTGT---- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5945740 67 - 181584905 ATCTTtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg------------------------tgtgGTC----TGTTTATTTGT---- i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 976111 41 - 16193990 ATCTT--------------------------tgtgtgtgtgtgtgtgtg------------------------tgtggtc----tgtttatttgt---- i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1797281 55 - 21434487 ATCTT------------tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg------------------------tgtgGTC----TGTTTATTTGT---- i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4759820 47 - 82825804 At--------------------gtgtgtgtgtgtgtgtgtgtgtgtgtg------------------------tgtgGTC----TGTTTATTTGT---- i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 265528 37 + 2521317 A------------------------------TCTTtgtgtgtgtgtgtg------------------------tgtggtc----tgtttatttgt---- i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1747186 42 - 2415367 ATCTT--------------------------tgtgtgt---tgtgtgtg------------------------tgtggtctgtttgtttatttgt---- i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64090222 53 + 204313951 ATCTT--------------tgtgtgtgtgtgtgtgtgtgtgtgtgtgtg------------------------tgtgGTC----TCTTTATTTGT---- i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2215887 73 + 10068113 ATCTT--------------tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg----tgtgtgtgtgtgtgtatgtgGTC----TCTTTATTTGT---- i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 71169 77 - 709587 atcTT--------------CgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtctgtctgtctgtgtgtgGTC----TCTTTATTTGT---- i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1171488 49 - 2246441 atctg--------------tgtgtgtgtgtgtgtgtgtgtgtgtg----------------------------tgtgGTC----TGTTTATTTGT---- i aotNan1.NW_018501968v1 C 0 C 0 s canFam3.chr4 37173171 39 + 88276631 ACCTT--------------------------------GGTCTGTCCttt------------------------ttttttttttttttttaatttt---- i canFam3.chr4 I 14 I 4 s dasNov3.JH562710 200291 39 - 960158 ACCTT--------------------------------AGCATGATCTTA------------------------TTTTTTT----TCTTTCTCTTTTTCC i dasNov3.JH562710 C 0 C 0 e mm10.chr13 65990938 25 - 120421639 I e otoGar3.GL873522 1241389 1811 + 48283576 I e proCoq1.NW_012152163v1 767590 6023 - 940639 I a score=2221602.000000 s hg38.chr5_KI270795v1_alt 59604 210 + 131892 -tt--TCTGGTCGAGGCCCTTGGGTTTGCTGAGCCTtccctattatagatgaaaagaccaaggcctaatgaggggaaacgtcttgcctgaggacacccagcCATTC----TCTGCTTAGATGCATATGCATTATGAAACCC-AAAGGT----CCTCTGGCACTGTGCGCTCCAGAACAGAGCCCTCCGCAAACACTGTATTTGAGCTTCACATTTGAAATAT s panTro5.chr5 5309804 208 - 181907262 -tt--TCTGGTCGAGGCCCTTGGGTTTGCTGAGCCTTCCCTAttatagatgaaaagaccgaggcctaatgaggggaaacgtcttgcctgaggacacccagccattc----tctgcttagatgcat--gcattatgaaaccc-aaaggt----cctctggcactgtgctctcCAGAACAGAGCCCtccgcaaacactgtatttgagcttcacatttgaaatat i panTro5.chr5 C 0 C 0 s panPan2.chr5 5572341 190 - 183735486 -tt--tctggtcgagg------------------ctaccctattatagatgaaaagaccaaggcctaatgaggggaaacgtcttgcctgaggacacccagccattc----tctgcttagatgcat--gcattatgaaaccc-aaaggt----cctctggcactgtgctctcCAGAACAGAGCCCtccgcaaacactgtatttgagcttcacatttgaaatat i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1702278 207 + 3967317 -tt--TCTGGTCGAGGCCCTTGGGTTTGCTGAGCCTtccctattatagatgaaaagaccaaggcctaatgaggggaaacgtcttgcctgaggacacccagcCATTC----TCTGCTTAGATGCAT--GCATTATGAAACCC-AAAGGT----CCTCTGGCACTGTGCTCTCCAGAACAGAGCCCTCC-caaacactgtatttgagcttcacatttgaaatat i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4578913 208 + 163208435 -tt--TCTGGTCGAGGCCCTTGGGTTTGCTGAGCCTTCCCTAttatagatgagaagaccaaggcctaatgaggggaaacgtcttgcctgaggacacccagccattc----tctacttagatgcat--gcattatgaaaccc-aaaggt----cctctggcactgtgctctcCAAAACAGAGCCCtccgcaaacactgtatttgagcttcacatttgaaatat i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5759343 204 - 180051392 -TT--TCTGGTCGAGGCCTTTGGGTTTGCTGAGCCTtccctattatagatgagaaaaccaaggccttatgaagggaaacatcttgcctgtggatacccagcTGTTC----TCCACTTACATGCAG--GCATTGTGAAGCCC-AAAGGT----CCTCTGGCACTGTGCTTTCCAAAACAGAGCCCTCC----ACACTGTatttgagcttcacatttgaaatat i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5945807 204 - 181584905 -TT--TCTGGTCGAGGCCTTTGGGTTTGCTGAGCCTtccctattatagatgagaaaaccaaggcctaatgaagggaaacatcttgcctgtggatacccagcTGTTC----TCCACTTACATGCAG--GCATTGTGAAGCCC-AAAGGT----CCTCTGGCACTGTGCTTTCCAAAACAGAGCCCTCC----ACACTGTatttgagcttcacatttgaaatat i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 976152 204 - 16193990 -TT--TCTGGTCGAGGCCTTTGGGTTTGCTGAGCCTtccctattatagatgagaaaaccaaggcctaatgaagggaaacatcttgcctgtggatacccagcTGTTC----TCCACTTACATGCAG--GCATTGTGAAGCCC-AAAGGT----CCTCTGGCACTGTGCTTTCCAAAACAGAGCCCTCC----ACACTGTatttgagcttcacatttgaaatat i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1797336 204 - 21434487 -TT--TCTGGTCAAGGCCTTTGGGTTTGCTGAGCCTtccctattatagatgagaaaaccaaggcctaatgaagggaaacatcttgcctgtggatacccagcTGTTC----TCCACTTACATGCAG--GCATTGTGAAGCCC-AAAGGT----CCTCTGGCACTGTGCTTTCCAAAACAGAGCCTTCC----ACACTGTatttgagcttcacatttgaaatat i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4759867 204 - 82825804 -TT--TCTGGTCGAGGCCTTTGGGTTTGCTGAGCCTTCCCTAttatagatgagaaaaccaaggcctaatgaagggaaacatcttgcctgtggatacccagcTGTTC----TCCACTTACATGCAG--GCATTGTGAAGCCC-AAAGGT----CCTCTGGCACTGTGCTTTCCAAAACAGAGCCCTCC----ACACTGTATTTGAGCTTCGCAtttgaaatat i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 265565 204 + 2521317 -TT--TCTGGTCGAGGCCTTTGGGTTTGCTGAGCCTtccctattatagatgagaaaaccaaggcctaatgaagggaaacatcttgcctgtggatacccagcTGTTC----TCCACTTACATGCAG--GCATTGTGAAGCCC-AAAGGT----CCTCTGGCACTGTGCTTTCCAAAACAGAGCCCTCC----ACACTGTatttgagcttcacatttgaaatat i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1747228 192 - 2415367 -TT--TCTGGTCGAGGCC-TTGGGTTTGCTGAGCCTTCCCTATTATAAATGAGAAAACCAAGGCCTAATGAAGGGAAACATCCTGGCTGTGGACACCCAGCTGTTC----TCCACTTCCATGCAG--GCATTGTGAAGCCCAAAAGGT----CCTCTGGCACTGTGCCCTCCAAAACAGA----------------GTatttgagcttcacatttgaaatat i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64090275 207 + 204313951 -TT--TTTGGTCTAGGACCTTGGGTTTTCTGAGCCTTCCCTATTATA-ATGAGAAAAACAAGGGCTAATGAGGGGAAGCATCTTGCCTGAAGACCCCCGGCAGTTC----TCCACTTAGATGCAT--GCATTATGAAGCCC-AAAGAT----CATCCGGCACTGTGCTCTCCAAAACAGAACCCTCCACAAACACTGTATTTGAGCTTTCCATTTTAAATGT i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2215960 205 + 10068113 -TT--TCTGGTCTAGGCCCTTGGGTTTGCTGAGCCTTCCCTCTTATA-ATGAGAAAAACAAGGGCTAATGAGGGGAAGCATCTTGTCTGAAGACCCCCAGCCATTC----TCCACTTAGATGCAT--GCATTATGAAGCCC-AAAGGT----CATCTGGCACTGTGCTCTCCAAAACAG--CCCTCCACAAACACTGTATTTGAGCTTTCCattttaaatgt i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 71246 207 - 709587 -TT--TCTGGTCTAGGCCCTTGTGTTTGCTGAGCCTTCCCTATTATA-GTGAGAAAAGCAAGGGCTAATGAGGGGAAGCATCTTGCCCGAAGACCCCTGGCCGTTC----TCCACTTAGATGCAT--GCATTATGAAGCCC-AAAGGT----CATCTGGCACTGTGCTCTCCAAAACAGAGCCCTCCACAAACACCGTATTTGAGCTTTCCattttaaatgt i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1171537 207 - 2246441 -TT--TCTGGTCTAGGCCCTTGGGTTTGCTGAGCCTTCCTTATTATA-ATGAGAAAAACAAGGGCTAATGAGGGGAAGCATCTTGCCTGAAGACCCCCGGCCGTTC----TCCACTTAGATGCAT--GCATTATGAAGCCC-AAAGGT----CATCTGGCACTGTGCTCTCCAAAACAGAGCCCTCCACAAACACTGTATTTGAGCTTTCCattttaaatgt i aotNan1.NW_018501968v1 C 0 C 0 s mm10.chr13 65990963 207 - 120421639 -TT--TTTAGTCAAGTCC-TTGAGCTTGCTAAACTGTGTCTGTCATAGATGAGAACACCAAGGCCGAAGGAAATATCATGTGTTGATGGGGGATGTCCTGCAGGAC----CCCACTTGGTCTCAG--ACATTGTAAGCTTC-AGTGAT----AACCTGGCATCCTGCTCTCTAAAGCTAAGACCTCTACACACATGCTCCTGGGGCCCCACATTTAACATGT i mm10.chr13 I 25 I 2677 s canFam3.chr4 37173214 209 + 88276631 -tC--TCTGATCAAGTCCCTTGAGTTTGCTAAGCCGTCCTTATGacagatgagaaaaccaatacctaatgaagtaaagcatcttgcctgaggacacccagcAGGGC----TCCACTCTGTTGGAC--TGAGTGTAAAGCTC-AGAGGTCACCCACCCATCACTGTGCTCTCCAAAGcagaggcttccacaaacac---acttgaacttcaccttttaaatat i canFam3.chr4 I 4 I 6 s dasNov3.JH562710 200330 198 - 960158 TTTGGTCTGGTGAAGTCAAGTGAGTTAGATAGACCATCCCTA--------------ACCAGGGCTTAATCAGGTGAAACATCTTGTTTGAGGACACATCACAGGACTCATTCCAAATAGATGTAT--GGATTGTAAAGCTC-AGAGGT----CATGTGACCCTGTGCTCTCCAAAGCAGAAGCCTCCACTAACATTTTACTTGCACATCACATTTAAAT--- i dasNov3.JH562710 C 0 C 0 e otoGar3.GL873522 1241389 1811 + 48283576 I e proCoq1.NW_012152163v1 767590 6023 - 940639 I a score=206418.000000 s hg38.chr5_KI270795v1_alt 59814 18 + 131892 GGATTTGAGCATTGTAAT s panTro5.chr5 5310012 18 - 181907262 ggatttgagcattgtaat i panTro5.chr5 C 0 C 0 s panPan2.chr5 5572531 18 - 183735486 ggatttgagcattgtaat i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1702485 18 + 3967317 ggatttgagcattgtaat i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4579121 18 + 163208435 ggatttgagcattgtaat i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5759547 18 - 180051392 ggattagaacattgtaat i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5946011 18 - 181584905 ggattagaacattgtaat i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 976356 18 - 16193990 ggattagaacattgtaat i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1797540 18 - 21434487 ggatttgaacattgtaat i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4760071 18 - 82825804 ggatttgaacattgtaat i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 265769 18 + 2521317 ggatttgaacattgtaat i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1747420 18 - 2415367 ggatttgaacattgtaat i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64090482 18 + 204313951 GGATTTGAACATTGTAAT i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2216165 18 + 10068113 ggatttgaacattgtaat i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 71453 18 - 709587 ggatttgaacattgtaat i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1171744 18 - 2246441 ggatttgaacattgtaat i aotNan1.NW_018501968v1 C 0 C 0 s canFam3.chr4 37173429 18 + 88276631 ctgtttaaacattgtatt i canFam3.chr4 I 6 C 0 s dasNov3.JH562710 200528 18 - 960158 AGaattgatttttgttat i dasNov3.JH562710 C 0 I 62042 e mm10.chr13 65991170 2677 - 120421639 I e otoGar3.GL873522 1241389 1811 + 48283576 I e proCoq1.NW_012152163v1 767590 6023 - 940639 I a score=4224567.000000 s hg38.chr5_KI270795v1_alt 59832 438 + 131892 AAACAGAACAAAAACCCTTGGATATATTGCATACTAAATGTTAGCA-TCTGGAGATGGCCAGCACAGTTTCTTCTGCCATTAACTCAGTTGTCAGTAAGTTTGACACTGAAGTTTGTCCTGCTATCTCTGTA----Caagtaaagaggaccctaaaaattgcaagcaaagcaaggttctaaatactgctaggattttcaactcctattacttgttgacctgggattttcttaatatatttgcaactttaaat-gtttaaaagttttgaagcttaaagtcagtgctgaggttgagacatgactaaatctgtcatccatgatatctaatttctttgtt--------------tgtt---tgtttgtttgttttttcagacagagtctcgttctgtcacccagcctggt--gtgcaatggttcacgccattctcctgcctcagcc----------tcccgagtagctgggattaca s panTro5.chr5 5310030 439 - 181907262 aaacagaacaaaaacccttggatatattgcatactaaatgttagca-tttggagatggccagcacagtttcttctgccattaactcagttgtcagtaagtttgacactgaagcttgtcctgctatctctgta----caagtaaagaggaccctaaaaattgcaagcaaagcaaggttctaaatactgctaggattttcaactgctattacttgttgacctgggattttcttaatatatttgcaactttaaaaagtttaaaagttttgaagcttaaagtcagtgctgaggttgagacatgactaaatctgtcatccatgatatctaatttctttgtt--------------tgtt---tgtttgtttgttttttcagacagagtctcgttctgtcacccagactggt--gtgcagtggttcaagcaattctcctgcctcagcc----------tcccaagtagctgggattaca i panTro5.chr5 C 0 C 0 s panPan2.chr5 5572549 435 - 183735486 aaacagaacaaaaacccttggatatattgcgtactaaatgttagca-tttggagatggccagcacagtttcttctgccattaactcagttgtcagtaagtttgacactgaagtttgtcctgctatctctgta----caagtaaagaggaccctaaaaattgcaagcaaagcaaggttctaaatactgctaggattttcaactgctattacttattgacctgggattttcttaatatatttgcaactttaaaaagtttaaaagttttgaagcttaaagtcagtgctgaggttgagacatgactaaatctgtcatccatgatatctaatttc----tt--------------tgtt---tgtttgtttgttttttcagacagagtctcgttctgtcacccagactggt--gtgcagtggttcaagcaattctcctgcctcagcc----------tcccaagtagctgggattaca i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1702503 439 + 3967317 aaacagaacaaaaacccttggatatattgcatactaaatgttagca-tttggagatggccagcacagtttcttctgcctttaactcagttgtcagtaagtttgacactgaagtttgtcctgctatctctgta----caagtaaagaggaccctaaaaattgcaagcaaagcaaggttctaaatactgctaggattttcagctgctattacttgttgacctgggattttcttaatatatttgcaactttaaaaagtttaaaagttttgaagcttaaagtcagtgctgaggttgagacatgactaaatctgtcatccatgatatctaatttctttgtt--------------tgtt---tgtttgtttgttttttcagacagagtctcgttctgtcacccagactggt--gtgcagtggttcaagcaattctcctgcctcagcc----------tcccaagtagctgggattaca i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4579139 427 + 163208435 aa----aacaaaaacccttggatatattgcatactaaatgttagca-tttggagatggccagcacagtttcttatgccattaactcagttgtcagcaagtttggcactgaagtttgtcctgctatctctgta----caagtaaagaggaccctaaaaattgcaagcaaagcaaggttctaaatactgctaggattttcaactgctattacttgttgacctgggattttcttaatatatttgcaactttaaaaagtttaaaagttttgaagcttaaagtcagtgctgaggttgagacatgacta-----gtcatccatgatctctaatttct---tt--------------tgtt---tgtttgtttgttttttgagacagcgtctcgttctgttacccaggctggt--gtgcagtggttcaagcaattctcctgcctcagcc----------tcccaagtagctgggattaca i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5759565 455 - 180051392 aaacagaacaaaaacccttggatatattgcatactaaatgttagca-tttggagatggccagcacagtttcttatgctgttaactcagttgtcagcaagtttgacactgaagtttgtcccgctatctctgta----taagtaaagaggaccct-aaaattgcaagcgaagcaaggttctaaatactgctaggattttcaactgctattacttggcgacctgggattttcttaatgtatttgcaactttaaaaagtttaaaatttttgaagcttaaagtcagtgctgaggttgagacatggctgtatctgtcatccataatatctaatttcttgttttttttgttttgttttgttttgttcttgtttttgttttgagccagagtctcactctgtcacccaggctggt--gtgcagcggttcaagcaattatcctgcctctgcc----------tcccaagtagctgggattaca i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5946029 454 - 181584905 aaacagaacaaaaacccttggatatattgcatactaaatgttagca-tttggagatggccagcacagtttcttatgctgttaactcagttgtcagcaagtttgacactgaagtttgtcccgctatctctgta----taagtaaagaggaccct-aaaattgcaagcgaagcaaggttctaaatactgctaggattttcaactgctattacttggcgacctgggattttcttaatgtatttgcaactttaaaaagtttaaaatttttgaagcttaaagtcagtgctgaggttgagacatggctgtatctgtcatccataatatctaatttcttgttt-ttttgttttgttttgttttgttcttgtttttgttttgagccagagtctcactctgtcacccaggctggt--gtgcagtggttcaagcaattatcctgcctctgcc----------tcccaagtagctgggattaca i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 976374 449 - 16193990 aaacagaacaaaaacccttggatatattgcatactaaatgttagca-tttggagatggccagcacagtttcttatgctgttaactcagttgtcagcaagtttgacactgaagtttgtcccgctatctctgta----taagtaaagaggaccct-aaaattgcaagcgaagcaaggttctaaatactgctaggattttcaactgctattacttggcgacctgggattttcttaatgtatttgcaactttaaaaagtttaaaatttttgaagcttaaagtcagtgctgaggttgagacatggctgtatctgtcatccataatatctaatttcttgttt------ttttgttttgttttgttcttgtttttgttttgagccagagtctcactctgtcacccaggctggt--gtgcagtggttcaagcaattatcctgcctctgcc----------tcccaagtagctgggattaca i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1797558 454 - 21434487 aaacagaacaaaaacccttggatatattgcatactaaatgttagca-tttggagatggccagcacagtttcttatgctgttaactcagttgtcagcaagtttgacactgaagtttgtcccactatctctgta----taagtaaagaggactct-aaaattgcaagcgaagcaaggttctaaatactgctaggattttcaactgctattacttagtgacctgggattttcttaatgtatttgcaactttaaaaagtttaaaatttttgaagcttaaagtcagtgctgaggttgagacatggctgtatctgtcatccataatatctaatttcttgttt-ttttgttttgttttgttttgttcttgtttttgttttgagccagagtctctctctgtcacccaggctggt--gtgcagtggttcaagcaattatcctgcctctgcc----------tcccaagtagccgggattaca i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4760089 449 - 82825804 aaacagaacaaaaacccttggatatattgcatactaaatgttagca-tttggagatggccagcacagtttcttatgctgttaactcagttgtcagcaagtttgacactgaagtttgtcccgctatctctgta----taagtaaagaggaccct-aaaattgcaagcgaagcaaggttccaaatactgctaggattttcaactgctattacttggcgacctgggattttcttaatgtatttgcaactttaaaaagtttaaaatttttgaagcctaaagtcagtgctgaggttgagacatggctgtatctgtcatccataatatctaatttcttgttt------ttttgttttgttttgttcttgtttttgttttgagccagagtctcactctgccacccaggctggt--gtgcagtagttcaagcaattatcctgcctctgcc----------tcccaagtagctgggattaca i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 265787 454 + 2521317 aaacagaacaaaaacccttggatatattgcatactaaatgttagca-tttggagatggccagcacagtttcttatgctgttaactcagttgtcagcaagtttgacactgaagtttgtcccactatctctgta----taagtaaagaggaccct-aaaattgcaagcgaagcaaggttctaaatactgctaggattttcaactgctattacttggtgacctgggattttcttaatgtatttgcaactttaaaaagtttaaaatttttgaagcttaaagtcagtgctgaggtggagacatggctgtatctgtcatccataatatctaaTTTCTTGTTT-ttttgttttgttttgttttgttcttgtttttgttttgagccagagtctcactctgtcacccaggctggt--gtgcagtggttcaagcaattatcctgcctctgcc----------tgccaagtagcggggattaca i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1747438 451 - 2415367 aaacagaacaaaaacccttggatatattgcatactaaatgttagca-tttgaagatggccagcacagtttctcatgctgttaactcagttgtcagcaagtttgacactgaagtttgtcctgctatctctgta----taagtaaagaggaccct-aaaattgcaagcgaagcaagtttctaaatactgctaggattttcaactgctattatttggcaacctgggattttcttaatgtatttgcaactttaaaaagtttaaaatttttgaagcttaaagtcaatgctaaagttgagacatgactgtatctgtcatccataatatctaatttcttgttt-ttttgttttgttttgtt---ttcttgtttttgttttgagccagagtctcactcggtcacccaggctggt--gtgcagtggttcaagcaattatcctgcctcagcc----------tcccaagtagctgggattaca i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64090500 370 + 204313951 AAGCAGAACCCCCCC-CTTGGATATATTGCATACCAAATGTTAGCA-TTTGGAGATGGCCG-----------------------------------------------------------GCTATCTCTGTA----TAAGTAAAGAGGACCCA-AAAGTTGCAAGCAAAGTAAGGTTCTACATACTGCTAGGATTATCAACTGCTATTACTTGGTGACCTGGGATTTTCTTAACATATTTGTAACTTTAAAAAGTTTAAAAGTTTTGAAGCTTAAAG-CAGTGCTGAGGTTAAGACATGACTCTATCTGTCATCCATAATATTTAAtttcttattc------------------------ttttttttttttgagaatggagtcttgctctgttgcccaggctggt--gtgcagtggttcaagcaatcctcctgcctcagcc----------tcccaagtagctgggattaca i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2216183 436 + 10068113 aaacagaacaacccc-cttggatatattgcataccaaatgttagca-tttggagatggccagcacagtttctcatgctgttaactcagttgtcagcaagtttgacactgaagtttgtcctgctatctctgca----taagtaaagagcaccca-aaagttgcaagcaaagcaaggttctaaatactgctaggattatcagctgccattatttggtgacctgggattttcttagtatatttgtaactctaaaaagtttaaaagttttgaagcttaaag-cagtgctgaggttgagacaggactgtatctgtcacccataatatttaatttcttattc--------------tttt---tttttttttttttttgagaatggagtctcactttgttgcccaggctggt--gtgcagtggttcaagcaatcctcctgcctcagcc----------tcctaagtagctgggattaca i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 71471 432 - 709587 aaacagaacaacccctcttggatgtattgcataccaaatgttagca-tttggaggtggccggcacagtttctcatgctgttaactcagttgtcagcaagtttgacactgaagtttgtcctgctatctctgta----taagtaaagaggaccca-aaagttgcaagcaaagcaaggttctaaatactgctgggattatcaactgctactacttggtgacttgggattttcttagtatatttgtaactttaaaaagtttaaaagttttgaagcttaaag-cagtgctgaggttgagacatgactgtatctgtcatccataatatttaatttcttattt----------------------atttatttttttttgagaagggagcctcgctctgttgcgcaggttggt--gtgcagtggttcaagcaatcctcctgcctcagcc----------tcccaagtagctgggattata i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1171762 428 - 2246441 aaacagaacaaccccccttggatatactgcataccaaatgttagca-tttggagatggccggcacagtttcttatgc---taactcagttgtcagcaagtttgacactgaagtttgtcctgctatctctgtt----taagtaaagaggaccca-aaagttgcaggcaaagcaaggttctaaatactgctaggattatcaactgctattacttggtgacctgggattttcttagtatatttgtaactttaaaaagtttaaaagttttgaagcttaaag-cagtgctgaggttgagacatgactgtatctgtcatccataatatttaatttcttattc-----------------------tttttttttttttgagaatggagtctcgctctgttgcccaggctggt--gtgcagtggttcaagcaatcctcctgcctcagcc----------tcccaagtagctgggattaca i aotNan1.NW_018501968v1 C 0 C 0 s canFam3.chr4 37173447 416 + 88276631 aaatgcaacaagaat-ctcagatacactgcatgctaaatattaacattttggaagtgaccagcatggtttcttaagctgttaactcaggtatgtgtaggcttgaccctaaagtttctccttttgtttctgtatgtgtaattgaaaataatact-gaaattaca----aagcaaacttttaaataccactagtatctccaactcctattcgttg-caaccagggattatctt--catatttataattgtaaaaagagtagggctt--------taaagttattgctgaggttgaaacatgactgcatctgtcat-cataatacctaattttctattc---------------------------------ttTAAAAAAAAAAACTTCCTATTCTgggcagcccggttggctcagcgcttta-gca-----ccgccttcagcccagggcatgatcccggggtcctgggatcaaa i canFam3.chr4 C 0 I 302 e mm10.chr13 65991170 2677 - 120421639 I e otoGar3.GL873522 1241389 1811 + 48283576 I e proCoq1.NW_012152163v1 767590 6023 - 940639 I e dasNov3.JH562710 200546 62042 - 960158 I a score=1452517.000000 s hg38.chr5_KI270795v1_alt 60270 154 + 131892 ggtgcccgccaccacgcccagctaatttttgtatgttcggtagagacggggtttcaccatgttggccaggctggtctcaaactcctgacctcaagcgacccacccgcctcggcctcccagagttttgcgattacaggcgtgagccaccacgccc s panTro5.chr5 5310469 154 - 181907262 ggcgcccaccaccatgcccagctaatttttgtatgtttggtagagacggggtttcaccatgttggccaggctggtctcaaactcctgacctcaagcaacccacccgtctcggcctcccaaagttttgcgattacaggcgtgagccaccacgccc i panTro5.chr5 C 0 C 0 s panPan2.chr5 5572984 154 - 183735486 ggcgcccacgaccatgcccagctaatttttgtatgtttggtagagacggggtttcaccatgttggccaggctggtctcaaactcctgacctcaagcaacccacccgtctcggcctcccaaagttttgcgattacaggcgtgagccaccatgccc i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1702942 154 + 3967317 ggcgcccaccaccatgcccagctaatttttgtatgtatggtagagacggggtttcaccatgttggccaggctggtctcaaactcctgacctcaagcgacccacccgcctcggcctcccaaagttttgcgattacaggcgtgagccaccacgccc i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4579566 154 + 163208435 ggcgcccaccacgacgcctggctaatttttgtatgtttagtagagatggggtttcaccatgttggccaggctgttctcaaactcctgacctcaagcaacccacctgcctcggcctcccaaagttttgcgattacaggcgtgagccaccacgcct i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5760020 154 - 180051392 ggtgcccaccaccacgcccggctaacttttgtatatgtagtagagacggggtttcaccatgttgaccaggttggtcttgaactcctaacctcgagcgacccacctacctcggcctcccaaagttttgggattacaggcatgagccaccgcaccc i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5946483 154 - 181584905 ggtgcccaccaccacgcccggctaacttttgtatatgtagtagagacggggtttcaccatgttgaccaggttggtcttgaactcctaacctcgagcgacccacctacctcggcctcccaaagttttgggattacaggcatgagccaccgcaccc i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 976823 154 - 16193990 ggtgcccaccaccacgcccggctaacttttgtatatgtagtagagacggggtttcaccatgttgaccaggttggtcttgaactcctaacctcgagcgacccacctacctcagcctcccaaagttttgggattacaggcatgagccaccgcaccc i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1798012 154 - 21434487 ggtgcccaccaccatgcccggctaacttttgtatatgtagtagagacggggtttcaccatgttgaccaggttggtcttgaactcctaacctcgagcgacccacctacctcggcctcccaaagttttgggattacaggcatgagccaccgcaccc i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4760538 154 - 82825804 ggtgcccaccaccacgtccggctaacttttctatatgtagtagagacggggtttcaccatgttgaccaggttggtcttgaactcctaacctcgagcgacccacctacctcggcctcccaaagttttgggattacaggcatgagccaccgcaccc i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 266241 154 + 2521317 ggtgcccaccaccacgcccggctaacttttgtatatgtagtagagacggggtttcaccatgttgaccaggttggtcttgaactcctaacctcgagcgacccacctacctcggcctcccaaagttttgggattacaggcatgagccaccgcaccc i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1747889 154 - 2415367 ggtgcccaccaccacacccggctaacttttgtatatgtagtagagacggggtttcaccatgttgaccaggttggtcttgaactcctgacctcgagcgacccacctacctcggcctcccaaagttttgggattacaggcatgagccaccgcgccc i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64090870 154 + 204313951 ggctcccaccaccatgcccagccaacttttatatttttaatagagacggggtttcaccatgttggccaggctggtcttgaactcctgacctcaagtggtccacctgtctcagcctcctaaaattcggggattccaggtatgagccactgcaccc i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2216619 154 + 10068113 ggctcccaccactatgcctggctaacttttgtatttttaatagagacggggtttcaccatgttggccaggctggtcttgaactcctgacctcaagtgatccagctgtctcagcctcctaaaattcggggattccaagtatgagccaccacaccc i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 71903 154 - 709587 ggctcccaccaccatgcccggctaacttttgtatttttaatagagacggtgtttcactgtgttggccaggctggtcttgaactcctgacctcaagtgatccagctgtctcagcctcctaaaattcggggattccagatatgagccaccacaccc i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1172190 154 - 2246441 ggctcccaccaccatgcctggctaacttttgtatttttaatagagacagggtttcactatgttggccaggctggtcttgaactcctgacctcaagtgatccagctgtctcagcctcctaaaattagggaattccaggtatgagccaccgcaccc i aotNan1.NW_018501968v1 C 0 C 0 e mm10.chr13 65991170 2677 - 120421639 I e otoGar3.GL873522 1241389 1811 + 48283576 I e canFam3.chr4 37173863 302 + 88276631 I e proCoq1.NW_012152163v1 767590 6023 - 940639 I e dasNov3.JH562710 200546 62042 - 960158 I a score=2415606.000000 s hg38.chr5_KI270795v1_alt 60424 240 + 131892 agcggaatttcttattctttttgatctatcaaaacaacct------cattgttctcaatgactgaccttataataagtaaatgttatagaACAT-ACAGTGTCA---------TTTTCCTTTTCCAGTAGAGGAagattacatttcccagagtttcttgcctttgaatagaggcctgtgactggatgctgagggcccctgggatgtgggcagGCATGGAGTTTG--TGGCTTCTTCCCCTTACACAGAGGCCAGAGCT s panTro5.chr5 5310623 240 - 181907262 agcggaatttcttattctttttgatctatcaaaacaacct------cattgttctcaatgactgaccttataataagtaaatgttatagaACAT-ACAGTGTCA---------TTTTCCTTTTCCAGTAGAGGAagattacatttcccagagtttcttgcctttgaatagaggcctgtgactggatgctgagggcccctgggatgtgggcagacatggagtttg--tggcttcTTCCCCTTACACAGAGGCCAGAGCT i panTro5.chr5 C 0 C 0 s panPan2.chr5 5573138 240 - 183735486 agcggaatttcttattctttttgatctatcaaaacaacct------cattgttctcaatgactgaccttataataagtaaatgttatagaACAT-ACAGTGTCA---------Ttttccttttccagtagaggaagattacatttcccagagtttcttgcctttgaatagaggcctgtgactggatgctgagggcccctgggatgtgggcaggcatggagtttg--tggcttcTTCCCCTTACACAGAGGCCAGAGCT i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1703096 240 + 3967317 agcggaatttcttattctttttgatctatcaaaacaacct------cattgttctcaatgactgaccttataataagtaaatgttatagaACAT-ACAGTGTCA---------Ttttccttttccagtagatgaagattacatttcccagagtttcttgcctttgaatagaggcctgtgactggatgctgagggcccctgggatgtgggcagacatggagtttg--tggcttcTTCCCCTTACACAGAGGCCAGAGCT i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4579720 240 + 163208435 ggcagaatttcttattctttttgatctatcaaaacaactt------cattgttttcaatgactgaccttataataagtaaatgttatagaACAT-ACAGTGTCA---------TTTTCATTTTCCAGTAGAGGAagattacatttcccagagtttcttgcctttgaatagaggcctatgactggatgctgagggcccctgggatgtgggcagacatggggtttg--tggcttcTTCCCCTTACACAGAGGCCAGAGCT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5760174 232 - 180051392 agcagaatttcttattctttttgatctatcaaaacaacct------cattgttctcaatgactgaccttatgataagtaaatgtgatagaacat-ataGTGTCG---------Ttttccttttccagtagaggaagattacatttcccagagtttcttgcatttgaatagaggcctgtgactcgatgctgagggcccctgggatgtgggcagatgtg----------ggcttcttccCCTTACACAGAGGCCAGAGCT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5946637 232 - 181584905 agcagaatttcttattctttttgatctatcaaaacaacct------cattgttctcaatgactgaccttataataagtaaatgtgatagaacat-ataGTGTCA---------TTTTCCTTTTCCAGTAGAGGAagattacatttcccagagtttcttgcatttgaatagaggcctgtgactcgatgctgagggcccctgggatgtgggcagatgtg----------ggcttcttccCCTTACTCAGAGGCCAGAGCT i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 976977 232 - 16193990 agcagaatttcttattctttttgatctatcaaaacaacct------cattgttctcaatgactgaccttataataagtaaatgtgatagaacat-ataGTGTCA---------TTTTCCTTTTCCAGTAGAGGAagattacatttcccagagtttcttgcatttgaatagaggcctgtgactcgatgctgagggcccctgggatgtgggcagatgtg----------ggcttcttccCCTTACTCAGAGGCCAGAGCT i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1798166 232 - 21434487 agcagaatttcttattctttttgatctatcaaaacaacct------cattgttctcaatgactgaccttataataagtaaatgtgatagaacat-ataGTGTCA---------Ttttccttttccagtagaggaagattacatttcccagagtttcttgcatttgaatagaggcctgtgactcgatgctgagggcccctgggatgtgggcagatgtg----------ggcttcttccCCTTACACAGAGGCCAGAGCT i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4760692 218 - 82825804 agcagaatttcttattctttttgatctatcaaaacaacct------cattgttctcaatgactgaccttataataagtaaatgttatagaacat-ataGTGTCA---------TTTTCCTTTTCCAGTAGAGGAAGATTACATTTCCTAGAGTTTCTTGCATTTGAA--------------TCGATGTTGAGGGCCCCTGGGATGTGGGCAGATATA----------GGCTTCTTCCCCTTACACAGAGACCAGAGCT i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 266395 232 + 2521317 agcagaatttcttattctttttgatctgtcaaaacaacct------cattgttctcaatgactgaccttataataagtaaatgtgatagaacat-ataGTGTCA---------Ttttccttttccagtagaggaagattacatttcccagagtttcttgcatttgaatagaggcctgtgactcgatgctgagggcccctgggatgtgggcagatgtg----------ggcttcttccCCTTACACAGAGGCCAGAGCT i manLeu1.NW_012103943v1 C 0 M 530 s colAng1.NW_012115755v1 1748043 232 - 2415367 agcagaatttcttattctttttgatctatcaaaacaacct------cattgttctcaatgactgaccttttaataagtaaatgttatagaacat-ataGTGTCA---------Ttttccttttccagtagaggaagattacatttcccagagtttcttgcatttgaatagaggcctgtgactcgatgctgagggcccctgggatgtgggcagatgtg----------ggcttcttccCCTTACACAGAGGCCAGAGCT i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64091024 236 + 204313951 aaccAAATTTCTTATTCTTTTTGATCTAGCAAAACAACCT------AATTGTTCTCAA----TGACCTTATAATAAGTAAATGTTATGGAATAT-ATAGTGTCA---------Ttttccttttctggtagaggaagattacatttcccagagtcccttgcatttgaatagaggcctgtaactagatgccaagggcccctggaatgtgggcagaagtggggtatg--tgccttcttccCCTTCCATGGAGGCTAGAGCT i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2216773 235 + 10068113 agccgaatttctgattctttttgatctatcagaacaa-ct------cattgttctcaa----tgaccttataataagtaaatgttatagaATAT-ATAGCGTca---------tttaccttttcctgtagaggaagactacatttcccagagtcctttgcatttgaatagaagcctgtaactagatactgagggcccctggcatgtgggcagaagttgggtatg--tgccttcttccCCTTCCATGGAGGCCAGAGCT i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 72057 241 - 709587 agccgaatttcttattctttttgatctatcaaaacaacctttgttgttttgttctc-a----tgaccttataataagtaaatgttatagaATAT-ATAGTGTCA---------Ttttccttttccggtagaggaagattacatttcccagagtcccttgcatttgaatagaggcctgtaactagatgctgagggcccctgggatgtgggcagaagtggggtatg--tgccttcTTTCCCTTCCTTGGAGGCCAGAGCT i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1172344 235 - 2246441 agccaaatttcttattctttttgatctatcaaaacaacct------ctttgttctcaa----tgaccttataataagtaaatattatagaATAT-ATAGTGTCA---------Ttttccttttccggtagaggaagattacattttccagagtcccttgcatttgaatagaggcctgtaactagatgctgagggcccc-gggatgtgggcagaagtggagtatg--tgccttcTTCCCCTTCCATGGAGGCCAGCGCT i aotNan1.NW_018501968v1 C 0 C 0 s canFam3.chr4 37174165 252 + 88276631 AAAAAAATTTCCTATTCtttttgatctgttaaaaaaatct------tattgttctcagtgattgaccttataataagtaaatgttataGTTTGTGGCAGAGATACCAAAAAACTTGTCTTTTACTGGCAGAGGAagactacatttcccagagtcccttgcatttgaatggagacatgtgactgggtgtcgagggccaccaggatatgggcagaaatggtatatgcTCTTTTTCTTTTCCTTCTGTAGAGTTCAGGGCT i canFam3.chr4 I 302 C 0 e mm10.chr13 65991170 2677 - 120421639 I e otoGar3.GL873522 1241389 1811 + 48283576 I e proCoq1.NW_012152163v1 767590 6023 - 940639 I e dasNov3.JH562710 200546 62042 - 960158 I a score=34440.000000 s hg38.chr5_KI270795v1_alt 60664 5 + 131892 GTATC s panTro5.chr5 5310863 5 - 181907262 GTATC i panTro5.chr5 C 0 C 0 s panPan2.chr5 5573378 5 - 183735486 GTATC i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1703336 5 + 3967317 GTATC i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4579960 5 + 163208435 TTATC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5760406 5 - 180051392 TTGTC i rheMac8.chr6 C 0 I 612 s macFas5.chr6 5946869 5 - 181584905 TTGTC i macFas5.chr6 C 0 I 387 s macNem1.NW_012018466v1 977209 5 - 16193990 TTGTC i macNem1.NW_012018466v1 C 0 I 408 s cerAty1.NW_012007035v1 1798398 5 - 21434487 TTGTC i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4760910 5 - 82825804 TTATC i chlSab2.chr23 C 0 C 0 s colAng1.NW_012115755v1 1748275 5 - 2415367 TTATC i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64091260 5 + 204313951 TTATC i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2217008 5 + 10068113 TTATC i saiBol1.JH378186 C 0 C 0 s aotNan1.NW_018501968v1 1172579 5 - 2246441 TTATC i aotNan1.NW_018501968v1 C 0 C 0 s canFam3.chr4 37174417 5 + 88276631 TTATC i canFam3.chr4 C 0 C 0 e cebCap1.NW_016107999v1 72298 0 - 709587 C e mm10.chr13 65991170 2677 - 120421639 I e otoGar3.GL873522 1241389 1811 + 48283576 I e proCoq1.NW_012152163v1 767590 6023 - 940639 I e dasNov3.JH562710 200546 62042 - 960158 I e manLeu1.NW_012103943v1 266627 530 + 2521317 M a score=158910.000000 s hg38.chr5_KI270795v1_alt 60669 16 + 131892 atggcagaaccacaga- s panTro5.chr5 5310868 16 - 181907262 atggcagaaccacaga- i panTro5.chr5 C 0 C 0 s panPan2.chr5 5573383 16 - 183735486 atggcagaaccacaga- i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1703341 16 + 3967317 atggcggaaccacaga- i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4579965 16 + 163208435 atggcagaaccacaga- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5761023 16 - 180051392 atggcagaaccacaga- i rheMac8.chr6 I 612 C 0 s macFas5.chr6 5947261 16 - 181584905 atggcagaaccacaga- i macFas5.chr6 I 387 C 0 s macNem1.NW_012018466v1 977622 16 - 16193990 atggcagaaccacaga- i macNem1.NW_012018466v1 I 408 C 0 s cerAty1.NW_012007035v1 1798403 16 - 21434487 ATGGCAGAACCACAGA- i cerAty1.NW_012007035v1 C 0 I 102 s chlSab2.chr23 4760915 16 - 82825804 atggcagaaccacaga- i chlSab2.chr23 C 0 C 0 s colAng1.NW_012115755v1 1748280 16 - 2415367 GTGGCAGAACTACAGA- i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64091265 16 + 204313951 atggcagaaccacaga- i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2217013 16 + 10068113 atggcagaaccacaaa- i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 72298 15 - 709587 -TGGCAGAACCACAGA- i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1172584 16 - 2246441 atggcagaaccacaga- i aotNan1.NW_018501968v1 C 0 C 0 s canFam3.chr4 37174422 17 + 88276631 ATTGCAGAATCACAAGA i canFam3.chr4 C 0 C 0 e mm10.chr13 65991170 2677 - 120421639 I e otoGar3.GL873522 1241389 1811 + 48283576 I e proCoq1.NW_012152163v1 767590 6023 - 940639 I e dasNov3.JH562710 200546 62042 - 960158 I e manLeu1.NW_012103943v1 266627 530 + 2521317 M a score=1356194.000000 s hg38.chr5_KI270795v1_alt 60685 169 + 131892 tggtgggagggtgggtctctggaccactgg-ttgaggggtggagaagatctgttaagaagagttccctgacctgcaccgaacagtgacaggagcaagaagcaaacctttgtgtgttaagccactgagatattggggtttatttattacagcagattctggtctatcctga s panTro5.chr5 5310884 169 - 181907262 tggtgggagggtgggtctctggaccactgg-ttgaggggtagagaagatctgctaagaagagttccctgacctgcactgaacagtgacaggagcaagaagcaaacctttgtgtgttaagccactgagatattggggtttatttattacagcagattctggtctatcctga i panTro5.chr5 C 0 C 0 s panPan2.chr5 5573399 169 - 183735486 tggtgggagggtgggtctctggaccactgg-ttgaggggtagagaagatctgctaagaagagttccctgacctgcaccgaacagtgacaggagcaagaagcaaacctttgtgtgttaagccactgagatattggggtttatttattacagcagattctggtctatcctga i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1703357 168 + 3967317 tggtgggagggtgggtctctggaccactgg-ttgaggggtagagaagatctg-taagaagagttccctgacctgcaccgaacagtgacaggagcaagaagcaaacctttgtgtgttaagccactgagatattggggtttatttattacagcagattctggtctatcctga i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4579981 168 + 163208435 tggtgggagggtgggtctctggaccactgg-ttgaggggtagagaagatctgctaagaagagttccctgacctgcactgaacggtgacaggagcgagaagcaaa-ctttgtgtgttaagccactgcgatattggggtttatttattacagcagattctggtctaccctga i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5761039 165 - 180051392 tggtgggagggtggatctctggaccactgg-ttgaggggtagagaaaatctgctaagaagagttccctgacctgcactgaacagtgacaggagcgagaagcaaaccttcgtgtgttaagccactgagatattgggg----tttattacagcagattctggtctatcctga i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5947277 165 - 181584905 tggtgggagggtggatctctggaccactgg-ttgaggggtagagaaaatctgctaagaagagttccctgacctgcactgaacagtgacaggagcgagaagcaaaccttcgtgtgttaagccactgagatattgggg----tttattacagcagattctggtctatcctga i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 977638 165 - 16193990 tggtgggagggtggatctctggaccactgg-ttgaggggtagagaaaatctgctaagaagagttccctgacctgcactgaacagtgacaggagcgagaagcaaaccttcgtgtgttaagccactgagatattgggg----tttattacagcagattctggtctatcctga i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1798521 165 - 21434487 tggtgggagggtggatctctggaccactgg-ttgaggggtagagaaaatctgctaagaagagttccctgacctgcactgaacagtgacaggagcgagaagcaaaccttcgtgtgttaagccactgagatattgggg----tttattacagcagattctggtctatcctga i cerAty1.NW_012007035v1 I 102 C 0 s chlSab2.chr23 4760931 165 - 82825804 tggtgggagggtggatctctggaccactgg-ttgaggggtagagaaaatctactaagaagagttccctgacctgcactgaacagtgacaggagcgagaagcaaacctttgtgtgttaagtcactgagatattgtgg----tttattacagcagattctggtctatcctga i chlSab2.chr23 C 0 C 0 s colAng1.NW_012115755v1 1748296 135 - 2415367 TGATGGGAGGGTGGATCTCTG-------------------------------CTAagaagagttccctgacctgcactgaacagttacaggaacgagaagcaaacctttgtgtgttaagccactgagatattgggg----tttattacagcagattctggtctatcctga i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64091281 147 + 204313951 tggtgtgagggtgggtctctggaccacagg-ttgagggatagagaagatctt----------------------cactgatcagtgacaggagcaagaagcaaacctttgcgtgttaagccactgagatgttgggatttatttatcatagtagattctggtctatcctga i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2217029 147 + 10068113 tggtgcgagggcaggtctctggaccactgg-ttgagggatagagaagatctt----------------------cactgatcagtgacaggagcgagaagcaaacctttgcgtgttaagccactgagatgttgggatatatttatcatagtagattctggtctatcctga i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 72313 148 - 709587 TGGTGCGAGGGCAGGTCTCTGGACCACTGGTTTGAGGGATAGAGAAGATCTT----------------------cactgatcagtgacaggagtgagaagcaaacctttgcgtgttaagccactgagatgttgggatttatttatcatagtagattctggtctatcctga i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1172600 147 - 2246441 tggtgcaagggtgggtctctggaccactgg-ttgagggatagagaagatctt----------------------cactgatcagtgacaggagcgagaagcaaacctttgcgtgttaaaccactgagatgttgggatttatttaacatagtagattctggtctatcctga i aotNan1.NW_018501968v1 C 0 C 0 s canFam3.chr4 37174439 152 + 88276631 TAGTGGGATGGTGGGTC--------ATTGG---GAGAGCTGGGG---ATCTGCCACGAAGTGCTTCCTGAATGTcattgaactgtgacatgaataagaagcaagtctttgtgtgttaaggtactgagatgttgggg----tttgttattacaagtcctggtctactctaa i canFam3.chr4 C 0 I 6 e mm10.chr13 65991170 2677 - 120421639 I e otoGar3.GL873522 1241389 1811 + 48283576 I e proCoq1.NW_012152163v1 767590 6023 - 940639 I e dasNov3.JH562710 200546 62042 - 960158 I e manLeu1.NW_012103943v1 266627 530 + 2521317 M a score=1031907.000000 s hg38.chr5_KI270795v1_alt 60854 121 + 131892 ctaatacTGGATCAAACAAATAACATTTCTtgc-aaatcaaaaccacaatgagataccatctcacgccagttaggaaggaggttattaaaaagtcaggaaacaacagatgctggcgaggctt s panTro5.chr5 5311053 121 - 181907262 ctaataTTGGATCAAACAAATAATGTTTCTtgc-aaatcaaaaccacaatgagataccatctcacgccagttagaaaggagattattaaaaagtcaggaaacaacagatgctggcgaggctg i panTro5.chr5 C 0 C 0 s panPan2.chr5 5573568 121 - 183735486 ctaatacTGGATCAAACAAATAACGTTTCTtgc-aaatcaaaaccacaatgagataccatctcacgccagttagaaaggagattattaaaaagtcaggaaacaacagatgctggcgaggctg i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1703525 121 + 3967317 ctaatacTGGATCAAAGAAATAACGTTTCTtgc-aaatcaaaaccacaatgagataccatctcacgccagttagaaaggagattattaaaaagtcaggaaacaacagatgctggcgaggctg i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4580149 121 + 163208435 ctaatacTGGATCAAACAAATAACGTTTCTtgc-aaatcaaaaccacagtgagataccgtctcacgccagttagaaaggagattattaaaaagtcaggaaacaacagatgctggcgaggctg i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5761204 121 - 180051392 ctaatacTGGATCAAACAAATACCGTTTCTtgc-aaatcaaaaccacaatgagataccgtctcacgccagttagaatggtgattattaaaaggtcaggaaacaacagatgctggagaggctg i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5947442 121 - 181584905 ctaatacTGGATCAAACAAATACCGTTTCTtgc-aaatcaaaaccacaatgagataccgtctcacgccagttagaatggtgattattaaaaggtcaggaaacaacagatgctggagaggctg i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 977803 110 - 16193990 ctaatacTGGGTCAAACAAATACCGTTTCTtgc-aaatcaaaaccacaatgagataccgtctcatgccagttagaatggtga-----------tcaggaaacaacagatgctggagaggctg i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1798686 121 - 21434487 ctaatacTGGATCAAACAAATACCGTTTCTtgc-aaatcaaaaccacaatgagatactatctcacgccagttagaatggtgattattaaaaagtcaggaaacagcagatgctggagaggctg i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4761096 121 - 82825804 ctaatacTGGATCAAACAAATACCATTTCTtgc-aaatcaaaaccacaatgagataccgtctcacgccagttagaatggtgattattaaaaagtcaggaaacaacagatgctggagaggctg i chlSab2.chr23 C 0 C 0 s colAng1.NW_012115755v1 1748431 121 - 2415367 ctaatacTGGATCAAACAAATACCGTTTCTtgc-aaatcaaaaccacaatgagataccatctcatgccagttagaatggtgattattaaaaagtcaggaaacaacagatgctggagaggctg i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64091428 122 + 204313951 ctcatacTAGATTAAACAAATAATATTTCTTGCAaaatcaaagccacaatgagataccatctcatgccagttagaatggtgattattaaaaagtcaggaaacaacagatgctggagaggatg i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2217176 121 + 10068113 ctaatacTGGATTAAACAAATAACATTTCTtgc-aactcaaagccacaatgagataccatctcacaccagttagaatggtgattattaaaaagttagaaaaccacagatgctggtaaggctg i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 72461 121 - 709587 ctaatacTGGCTTAAACAAATAACATTTCTtgc-aaatcaaagccacaaggagataccatctcatgccagttagaatggtgaccattaaaaagtcaggaaacaacagatgctggtaaggctg i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1172747 121 - 2246441 ctaatacTGGATTAAACAAATAACATTTCTtgc-aaatcaaagccacaatgagataccatctcacgccagttagaatggtgattattagacagtcaggaaacaacagatgctggtaaggctg i aotNan1.NW_018501968v1 C 0 C 0 e mm10.chr13 65991170 2677 - 120421639 I e otoGar3.GL873522 1241389 1811 + 48283576 I e canFam3.chr4 37174591 6 + 88276631 I e proCoq1.NW_012152163v1 767590 6023 - 940639 I e dasNov3.JH562710 200546 62042 - 960158 I e manLeu1.NW_012103943v1 266627 530 + 2521317 M a score=6389266.000000 s hg38.chr5_KI270795v1_alt 60975 650 + 131892 tggagaaataggaacacttttacgctattggtgggagtgtaaattagtacaaccattgtggaagacagtatggtgattcctcaaggatctagaaccagaaat-accatttgacccagcaatcccattactgggtatatacccaaaggatgataaagcattctactataaagacacatgcacaggtatgtttattgcagcactatttacagtagcaaagac-ttggaaccaacc----caaatgcccatcaatgatggattggataaagaaaatgtggcacatacacaccatggaatactgtgcagccat-----aaaaaatgagttcatgtcctttgcagggacatggatagagctggaaaccatcatcctcagcaaactaacacaggcacagaaaaccaagcaccgcatgttctcactcataagtgggagttgagcaatgaggacacatggacacagggaggggaacatcacacaccggggcctgttggggggtgaggggccaggggagggatagcattaggacaaatacctaatgcatgcggggcttaaaacctagatgatgggttggt-aggtgtagcaaaccaccatgacacatgtatacctatgtaacaaacctgcacgttctgcacatgtatcccagagcataaagt-aaaataaaa s panTro5.chr5 5311174 650 - 181907262 tggagaaataggaacgcttttacgctattggtgggagtgtaaattagttcaaccattgtggaagacagtatggtgattcctcaaggatctagaaccagaaat-accatttgacccagcaatctcattactgggtatatacccaaaggatgataaagcattctactataaagacacatgcacatgtatgtttattgcagcactatttacaatagcaaagac-ttggaaccaacc----caaatgcccatcaatgatagactggataaagaaaatgtggcacatacacaccatggaatactatgcagccat-----aaaaaatgagttcatgtcctttgcagggacatggatagagctggaaaccatcatcctcagcaaactaacacaggaacagaaaaccaaacaccgcatgttctcactcataagtgggagttgagcaatgaggacacatggacacagggaggggaacatcacacaccggggcctgttggggggtgaggggccaggggagggacagcattaggacaaatacctaatgcatgcggggcttaaaacctagatgatgggttgat-aggtgcagcaaaccaccatgacacatgtatacctatgtaacaaacctgcacgttctgcacatgtatcccagagcgtaaagt-aaaataaaa i panTro5.chr5 C 0 C 0 s panPan2.chr5 5573689 649 - 183735486 tggagaaataggaacgcttttacgctattggtgggagtgtaagttagttcaaccattgtggaagacagtatggtgattcctcaaggatctagaaccagaaat-accatttgacccagcaatcccattactgggtatatacccaaaggatgataaagcattctactataaagacacatgcacatgtatgtttattgcagcactatttacaatagcaaagac-ttggaaccaacc----caaatgcccatcaatgatagactggataaagaaaatgtggcacatacacaccatggaatactatgcagccat-----aaaaaatgagttcatgtcctttgcagggacacggatagagctggaaaccatcatcctcagcaaactaacacaggaacagaaaaccaaacaccgcatgttctcactcataagtgggagttgagcaatgaggacacatggacacagggaggggaacatcacacactggggcctgttggggggtg-ggggctaggggagggacagcattaggacaaatacctaatgcatgcggggcttaaaacctagatgatgggttgat-aggtgcagcaaaccaccatgacacatgtatacctatgtaacaaacctgcacgttctgcacatgtatcccagagcgtaaagt-aaaataaaa i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1703646 651 + 3967317 tggagaaataggaacgcttttatgctactggtgggagtgtaaattagttcaaccattgtggaagacagtatggtgattcctcaaggatctagagccagaaat-accatttgacccagcagtcccattactgggtatatacccaaaggatgataaagcattctactataaagacacatgcacatgtatgtttattgcagcactatttacaatagcaaagac-ttggaaccaacc----caaatgcccatcaatgatagactggataaagaaaatgtggcacatacacaccatggaatactatgcagccat-----aaaaaatgagttcatgtcctttgcagggacatggatagagctggaaaccatcatcctcagcaaactaacacaggaacagaaaaccaaacaccgcatgttctcactcataagtgggagctgagcaatgaggacacgtggacacagggaggggaacatcacacaccggggcctgttgaggggtgaggggccaggggagggacagcattaggacaaatacctaatgcatgcggggcttaaaacctagctgatgggttgataaggtgcagcaaaccaccatgacacatgtatatctatgtaacaaacctgcacgttctgcacatgtatcccagagcgtaaagt-aaaataaaa i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4580270 649 + 163208435 tggagaaataggaacgcttttacactgttagtgggagtgtaaattagttcaaccattgtggaagacagtgtggtgattcctcaaggatctagaaccagaaat-accatttgacccagcaatcccattactgggtatatatccaaaggatgataagtcattctactataaagacacatgcacacgta-gtttattgcagcactatttacaatagcaaagac-ttggaaccaacc----caaatgcccatcaataatagactggattaagaaaatatggcaaatacacaccatggaatactatgcagccat-----aaaaaatgagttcacgtcctttgcagggacatggatagagctggaaaccgtcatcctcagcaaactaacacaggaacagaaaaccaaacaccgcatgttctcactcataagtgggagttgagcaatgagaacacatggacacagagaggggaacctcacacaccagggcctgtcagggggtgaggggccaggggagggacagcattaggacaaatacctaatgcatgcagggcttgaaacctagatgatgggttgat-aggtgcagcaaaccaccatgacacatgtatacctatgtaacaaacctgcacgttctgcacatgtatcccagagcttaaagt-aaaataaaa i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5761325 653 - 180051392 tggagaaataggaatgcttttgcactgttggtgggagtgtaaattagttcaaccattgtggaagacagtgtggagattcctcaaggatctagaaccagaaat-accatttgacccagtgatcccattactgggtatatacccaaaggatgataaatcattctactataaagacacatgcacacgtatgtttgttgcagtgctgttcacaatagcagagac-ttggaaccaacc----caaatacccatcagtgatagattggattaagaaaatgtggcacacacacaccatggaatactatgcagccat--aaaaaaaaatgagttcatgtcctttgcagggacgtggatgaagctggaaaccattatcctcagcaaactaacacaggaacagaaaaccaaacaccacatgttctcactcataagtgagggttgaacaatgagaacacatggacacagggaggggaacatcacacaccagggcctgtcagggggtgaggggcca-ggaggggacagcattaggacaaatacctgatgcatgtggggcttaaaacctagatgacaggttgat-gggtgcagcaaaccaccacggcacgtgtatacctatgtaacaaacctgcacgttctgcacatgtatcccagagcttaaagtaaaaataaaa i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5947563 653 - 181584905 tggagaaataggaatgcttttgcactgttggtgggagtgtaaattagttcaaccattgtggaagacagtgtggagattcctcaaggatctagaaccagaaat-accatttgacccagtgatcccattactgggtatatacccaaaggatgataaatcattctactataaagacacatgcacacgtatgtttgttgcagtgctgttcacaatagcagagac-ttggaaccaacc----caaatacccatcagtgatagattggattaagaaaatgtggcacacacacaccatggaatactatgcagccat--aaaaaaaaatgagttcatgtcttttgcagggacatggatgaagctggaaaccattatcctcagcaaactaacacaggaacagaaaaccaaacaccacatgttctcactcataagtgagggttgaacaatgagaacacatggacacagggaggggaacatcacacaccagggcctgtcagggggtgaggggcca-ggaggggacagcattaggacaaatacctgatgcatgtggggcttaaaacctagatgacaggttgat-gggtgcagcaaaccaccacggcacgtgtatacctatgtaacaaacctgcacgttctgcacacgtatcccagagcttaaagtaaaaataaaa i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 977913 653 - 16193990 tggagaaataggaatgcttttgcactgttggtgggagtgtaaattagttcaaccattgtggaagacagtgtggagattcctcaaggatctagaaccagaaat-accatttgacccagtgatcccattactgggtatatacccaaaggatgataaatcattctactataaagacacatgcacacatatgtttgttgcagtgctgttcacaatagcagagac-ttggaaccaacc----caaatacccatcagtgatagattggattaagaaaatgtggcgcacacacaccatggaatactatgcagccat--aaaaaaaaatgagttcatgtcctttgcagggacatggatgaagctggaaaccattatcctcagcaaactaacacaggaacagaaaaccaaacaccacatgttctcactcataagtgagggttgaacaatgagaacacatggacacagggaggggaacatcacacaccagggcctgtcagggggtgaggggcca-ggaggggacagcattaggacaaatacctgatgcatgtggggcttaaaacctagatgacaggttgat-gggtgcagcaaaccgccacggcacgtgtatacctatgtaacaaacctgcacgttctgcacacgtatcccagagcttaaagtaaaaataaaa i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1798807 653 - 21434487 tggagaaataggaatgcttttgcactgttggtgggagtgtaaattagttcaaccattgtggaagacagtgtggagattcctcaaggatctagaaccagaaat-accatttgacccagtgatcccattactgggtatatacccaaaggatgataaatcattctactataaagacacatgcacacgtatgtttgttgcagtgctgttcacaatagcagagac-ttggaaccaacc----caaatacccatcagtgatagactggattaagaaaatgtggcacacacacaccatggaatactatgcagccat--aaaaaaaaatgagttcatgtcctttgcagggacatggatgaagctggaaaccattatcctcagcaaactaacacaggaacagaaaaccaaacaccacatgttctcactcataagtgagggttgaacaatgagaacacatggacacagggaagggaacatcacacaccagggcctgtcagggggtgaggggcca-ggaggggacagcattaggacaaacacctgatgcatgtggggcttaaaacctagatgacaggttgat-gggtgcagtaaaccaccacggcatgtgtatacctatgtaacaaacctgcacgttctgcacacgtatcccagaacttaaagtaaaaataaaa i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4761217 656 - 82825804 tggagaaataggaatgcttttgcactgttggtgggagtgtaaattagttcaaccattgtggaagacagtgtggtgattcctcaaggatctagaaccagaaat-accatttgacccagtgatcccattactggatatatacccaaaggatgataaatcattctactataaagacacatgcacacatatgtttgttgcagtgctgtttacaatagcagagcc-ttggaaccaacc----caaatacccatcagtgacagattggattaagaaaatgtagcgcgcacacaccatggaatactatgcagccataaaaaaaaaaatgagttcatgtcctttgcagggacatggatgaagctggaaaccattatcctctgcaaactaacacaggaacagaaaaccaaacaccacatgttctcactcataagtgggagttgaacaatgagaacacatggacacagggaagggaatatcacacaccagggcctgtcagggggtgaggggtcagggaggggacagcattaggacaaatacctgatgcatgtggggcttaaaacctagatgacaggttgat-gggtgcagcaaaccaccacggcacgtgtatacctatgtaacaaacctgcacgttctgcacacatatcccagagcttaaagtaaaaataaaa i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 267163 653 + 2521317 tggagaaataggaatgcttttgcactgttggtgggagtgtaaattagttcaaccattgtggaagacagtgtggagattcctcaaggatctagaaccagaaat-accatttgacccagtgatcccattactgggtatatacccaaaggatgataaatcattctactataaagacacatgcacacgtatgtttgttgcagtgctgttcacaatagcagagac-ttggaaccaacc----caaatacccatcagtgatagactggattaagacaatgtggcacacacacaccatggaatactatgcagccat--aaaaaaaaatgagttcatgtcctttgcagggacatggatgaagctggaaaccataatcctcagcaaactaacacaggaacagaaaaccaaacaccacatgttctcactcataagtgagggttgaacaatgagaacacatggacacagggaagggaacgtcacacaccagggcctgtcagggggtgaggggcca-ggaggggacagcattaggacaaacacctgatgcatgtggggcttaaaacctagatgacaggttgat-gggtgcagcaaaccaccatggcacgtgtatacctatgtaacaaacctgcacgttctgcacacgtatcccagagcttaaagtaaaaataaaa i manLeu1.NW_012103943v1 M 530 C 0 s colAng1.NW_012115755v1 1748552 653 - 2415367 tggagaaataggaatgcttttacactgttggtgggagtgtaaattagttcaaccattgtggaagacagtgtggtgattcctcaaggatctagaaccagaaat-accatttgacccagtgatcccattgctgagtatatacccaaaggatgataaatcattctaccataaagacacatgcacacgtatgtttgttgcagtgccgttcacaatagcaaagac-ttggaaccaacc----caaatacccatcagtgacagactggattaagaaaatgtggcacatacacaccatggaatactatgcagccat---aaaacaaatgagttcatgtcctttgcaggggcatggatgaagctggaagccattatcctcagcaaactaacacaggaacagaaaaccaaacaccacatgttctcactcataagtgggagttgaacagtgggaacacatggacacagggaagggaacatcacacaccagggcctgtcagggggtgaagggccagggaggggacagcattaggacaaatacctgatgcatgtggggcttaaaacctagatgacaggttgat-gggtgcagtaaaccaccatggcacatgtacacctatgtaacaaacctgcacgttctgcacacgtatcccagagcttaaagtaaaaataaaa i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64091550 656 + 204313951 tggagaaacaggaacacttttacactgttggtgggagtgtaaattagttcagccattgtggaagacagtgtggcaattcttcaaggatctagaaccagaaat-accatttgacccagcaatcccattactgagtacatacccaaaggattataaatcaatgtactataaagacatatgcacatgtatgtttattgcaacactatttacaatagcaaagac-ttgggaccaacccaaccaaatgcccattaacaatagactggataaagaaaatgtggcacatatacaccatggaatattatgcagccat--aaaaaagaatgagataatgtcctttgcagggacatggatgaagctggaagccatcatcctcagcaaactcacacagtaatagaaaaccaaacaccacatgttctcattcataagtgggaattgaataatgagaacacatggacacagggaaggagacatcatatactgggtcctcttggggggtaaggagcag-gggagggagagcattaggacaaatacctaatgcatgtggggcttaaaacctagatgatgggttgat-aggtgcagcaaaccaccatggcccatgtatacctatgcaacaaacctacaagttctgcacgtgtatcccagaccttaaagt-aaaataaaa i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2217297 656 + 10068113 tggagaaacaggaacacttttatactgttggtggaagtgtaaattagttcaaccattgtggaagacagtgtggccattcctcaaggatctagaaccagaaat-accatttgacccagcaatcccattactgggtacatacccaaaggattataaatcattctactataaagacacatgcacacgtatgtttattgcagcactatttacaatagcaaagac-ttggaaccaacccaaccaaatgcccatcaacgatagactggataaagaaaatatggcacatatacaccatggaatactatgcagcctt--aaaaaagaatgagatcatgtcctttgcagggacatgaatgaagctggcagccatcatcctcagcaaactcacacagtagcacaaaaccaaacaccacatgttctcattcataagtgagaattgaataatgagaacacatggacacagggagggaaacaccatacactggggcctgttggggggtgaggagcag-gggagggagaacatcaggacaaatacctaatgcatgcggggcttaaaacctagatgatgggttgat-aggtgcagcaagccaccatggcccatgtatacctatgtaacaaaccggcaagttctgcatgtttatcccagaacttaaagt-aaaataaaa i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 72582 655 - 709587 tggagaaacaggaacacttttatactgttggtgggagtgtaaattagttcaaccattgtggaagactgtgtgataattcctcaaggatctagagccagaaat-accatttgacccagcaatccccttactgggtacatacccaaaggattagaaatcattctactataaagacacgtgcacacatatgtttattgcagcactatttacaatagcaaagac-ttggaaccaacccaaacaaacgcccatcaacgatagactggttaaagaaaatgtggcacatatacaccatggaatactatgcagctat--aaaaaagaatgagatcatgtcctttgcaggaacatggatgaagctggaagccattatcctcagcaaactcacacagtaacag-aaatcaaacaccacatgttctcattcataagtgggaattgaataatgagaacacacggacacagggagggaaacatcatacactgggtcctgttggggggtgaggagcag-gggagggagaacatcaggacaaatacctaatgcatgcagggcttaaaacctagatgatgggttgat-aggtgcagcaaactaccatggcccctgtatacctatgcgacaaacctacaagttctgcacgtgtatcccagagcttaaagt-aacataaaa i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1172868 657 - 2246441 tggagaaacaggaacatttttatactgttggtaggagtgtaaattagttcaaccattgtagaagacagtgtggcgattcctcaaggatctagaaccagaaataaccatttgacccagcaatcccattactgagtacatacccaaaggattataaatcattctactataaagacacatgcacacatatgtttattgcagcactatttacaatagcaaagactttggaaccaacccaaccaaaaacccatcaacgatagactggataaagaaaatgtggcacatatacaccatggaatactatgcagccat--aaaaaagaatgagatcatgt-ctttgcagggacatggatgaagctggaagccatcatcctcagcaaactcacacagtaacagaaaaccaaacaccacatgttctcattcataagtgggaattgaataatgagaacacatggacacagggagggaaacatcatacaccgggtcctgttggggggtgagaagcag-gggagggagagcattaggacaaatacctaatgcacgtggggcttaaaacctagatgttgggttcat-aggtgcagcaaaccaccatggctcatgtatacctatgcaataaatctacaagttctgcatgtgtatcccagaacttaaagt-aaaataaaa i aotNan1.NW_018501968v1 C 0 C 0 e mm10.chr13 65991170 2677 - 120421639 I e otoGar3.GL873522 1241389 1811 + 48283576 I e canFam3.chr4 37174591 6 + 88276631 I e proCoq1.NW_012152163v1 767590 6023 - 940639 I e dasNov3.JH562710 200546 62042 - 960158 I a score=-16021.000000 s hg38.chr5_KI270795v1_alt 61625 7 + 131892 a----------TTAAAC s panTro5.chr5 5311824 14 - 181907262 aataa---aaaTTAAAC i panTro5.chr5 C 0 C 0 s panPan2.chr5 5574338 14 - 183735486 aataa---aaaTTAAAC i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1704297 13 + 3967317 a-taa---aaaTTAAAC i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4580919 13 + 163208435 a-taa---aaaTTAAAC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5761978 12 - 180051392 attaa---aaa--aaCC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5948216 12 - 181584905 attaa---aaa--aaCC i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 978566 12 - 16193990 attaa---aaa--aaCC i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1799460 12 - 21434487 attaa---aaa--aaCC i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4761873 11 - 82825804 att-t---aaa--aaCC i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 267816 12 + 2521317 attaa---aaa--aaCC i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1749205 12 - 2415367 attta---aaa--aaCC i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64092206 15 + 204313951 taaaaaTAAAA--AAAC i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2217953 15 + 10068113 tgaaaataaaa--AAAC i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 73237 15 - 709587 taaaaaTTAAA--AAAC i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1173525 9 - 2246441 ca------aaa--aaaC i aotNan1.NW_018501968v1 C 0 C 0 s canFam3.chr4 37174597 7 + 88276631 ----------ATTAAAC i canFam3.chr4 I 6 C 0 e mm10.chr13 65991170 2677 - 120421639 I e otoGar3.GL873522 1241389 1811 + 48283576 I e proCoq1.NW_012152163v1 767590 6023 - 940639 I e dasNov3.JH562710 200546 62042 - 960158 I a score=65774.000000 s hg38.chr5_KI270795v1_alt 61632 6 + 131892 ACaagt s panTro5.chr5 5311838 6 - 181907262 ACAAAT i panTro5.chr5 C 0 C 0 s panPan2.chr5 5574352 6 - 183735486 ACaaat i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1704310 6 + 3967317 ACaaat i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4580932 6 + 163208435 ACaaat i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5761990 6 - 180051392 ACaaat i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5948228 6 - 181584905 ACaaat i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 978578 6 - 16193990 ACaaat i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1799472 6 - 21434487 ACaaat i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4761884 6 - 82825804 ACaaat i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 267828 6 + 2521317 ACaaat i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1749217 6 - 2415367 ACaaat i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64092221 6 + 204313951 ACAAAT i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2217968 6 + 10068113 ATaaat i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 73252 6 - 709587 ACAAAT i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1173534 6 - 2246441 ACAAAT i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1243200 6 + 48283576 ACAAAT i otoGar3.GL873522 I 1811 C 0 s canFam3.chr4 37174604 4 + 88276631 ATAG-- i canFam3.chr4 C 0 C 0 e mm10.chr13 65991170 2677 - 120421639 I e proCoq1.NW_012152163v1 767590 6023 - 940639 I e dasNov3.JH562710 200546 62042 - 960158 I a score=7017481.000000 s hg38.chr5_KI270795v1_alt 61638 604 + 131892 aacatttctaataaaacacagctct-tatctgttctatgttttgggttccatgtattgtttattgaaaagtaaa-aaagttttctgctacaa-aaggtatcaaaatcaGCAATTGAGTTTGAAGTCAGAatcttacaggtagg-gaactcaagggctggagaggagaaataatttgtccagggtcacatagctgaggcagggctaaaaTCTCGCAGAGggacatctgtagttttatcctgtcctttcttttggtaacagcagctgaatttcctcatcttcctgctcaggccacatgcttcatatgggactcattctcatccctcagctccaggcctggtgaatctatatcgtctatcacccaagcc--tcagtgattagcttgaggatggatgcatgacccagtccagaccaatcacagcgaatccctggatttttgctggagctg--------------ctctccgtggatagttgaatcaataggat---------ataagtctggagctcctgggtgctatctcagtatctctaggttgagaatgcagctaacacagaggaaagcagagctgaaatgtggagagagcccgacgatgcttga---tggtgtttgagcacctggatccagccatg s panTro5.chr5 5311844 603 - 181907262 AACATTTCTAATTAAACACAGCTCT-TATCTGTTCTATGTTTTGGGTTCCATGTATTGTTTATTGAAAAGTAAA-AAAGTTTTCTGCTACAA-AAGGTATCAAAATCAGCAATTGAGTTTGAAGTCAGAatcttacaggtagg-gaactcaaggactggagaggagaaataatttgtc-agggtcacatagctgaggcagggctaaaaTCTCGCAGAGggacatctgtagttttatcctgtcctttcttttggtaacagcagctgaatttcctcatcttcctgctcaggccacatgcttcatatgggattcattctcatccctcagctccaggcctggtgaatctatatcatctatcacccaagcc--tcagtaattagcttgaggatggatgcatgacccagtccagaccaatcacagcgaatccctgggtttttgctggagctg--------------ctctctgtggatagttgaatcaataggat---------ataagtctggagctactgggtgctatctcagtatctctaggttgagaatgcagctaacacagaggaaagcagagctgaaatgtggagagagccagacgatgcttga---tggtgtttgagcacctggatccagccatg i panTro5.chr5 C 0 C 0 s panPan2.chr5 5574358 603 - 183735486 aacatttctaataaaacacagctct-tatctgttctatgttttgggttccatgtattgtttattgaaaagtaaa-aaagttttctgctacaa-aaggtatcaaaatcaGCAATTGAGTTTGAAGTCAGAatcttacaggtagg-gaactcaaggactggaggggagaaataatttgtccagggtcacatagctgaggcagggctaaaaTCTCGCAGAGggacatctgtagttttatcctgtcctttcttttggtaacagcagctgaatttcctcatcttcctgctcaggccacatgcttcatatgggattcattctcatccctcagctccaggcctggtgaatctatatcgtctatcacccaagcc--tcagtgattagcttgaggatggatgcatgacccagtccagaccaatcacagcgaatccctgggtttttgctggagctg--------------ctctctgtggatagttgaatcaataggat---------ataagtcgggagctactgggtgctatctcagtatctctaggttgagaatgcagctaacacagaggaaa-cagagctgaaatgtggagagagccagacgatgcttga---tggtgtttgagcacctggatccagccatg i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1704316 603 + 3967317 aacatttctaataaaacacagctct-tatctgttctatgttttgggttccatgtattgtttattgaaaagtgaa-aaagttttctgctacaa-aaggtatcaaaatcaGCAATTGAGTTTGAAGTCAGAatcttacaggtagg-gaactcaagggctggagaggagaaataatttgtccagggtcacatagctgaggcagtgCTAAAATCTTGCAGAGGGACATCTGTAGTTTTATCCTGTCCTTTCTTTTGGTAACAGCAGCTGAATTTCCTCATCTTCCTGCTCAGGCCACATGCTTCATATGGGACTCATTCTCATCCCTCAGCGccaggcctggtgaatctatatcgtctatcacccaagcc--tcagtgattagcttgaggatggatgcatgacccagtccagaccaatcacagcgaatccctgggtttttgctggagctg--------------ctctccgtggatagttgaatcaataggat---------ataagtctggagctact-ggtgctatctcagtatctctaggttgagaatgcagctaacacagaggaaagcagagctgaaatgtggagagagccagacgatgcttga---tggtgtttgagcacctggatccagccatg i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4580938 604 + 163208435 aacatttctcataaaacacagctct-tatctgttctgtgttttgggttccatgtattgtttattgaaaagtaaa-aaagttttctgctacaa-aaggtatcaaaatcaGCAATTGAGTTTGAAGTCAGAatcttacaggtggg-gaactcaagggctggagaggagaaataacttgtccagggtcacatagctgaggcagggctaatatctcgCAGAGggacatctgtagttttatcctgtcctttcttttggtaacagcagctgaatttcctcatcttcctgctcgggccacatgcttcatgtgggactcattctcatccctcagctccaggcctggcgaatctatatcgtccatcacccaagcc--tcagtgattagcttgaggatggatgcatgacccagtccagaccaatcacaatgaatccctgggtttttgctggagctg--------------ctctccatggatagttgaatcaataggat---------ataagtctggagctactgggtgctgtctcaatatctctaggttgagaatgcagctaacacagaggaaagtagagttgaaatgtggagagagccagacgatgcttga---tgatgtttgaacacctggatccagccatg i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5761996 589 - 180051392 aacatttctaacaaaacacagctct-tatctgttctatgtattgggttccatgtattgtttattgaaaagt----aaagttttccgctacta-aaGGTATCAAAATCTGCGATGGAGTTTGAAGTCAGAatcttacaggtgga-gaactcaagggctggagaggagaaataacacctccagggtcacatagctgaggcagggctaaaaTCCTCC------------GTAGTTTTATCCTGTcctttcttttggtaacggcagctgaatttcctcctcttcctgctcaggccacatgcttcgtgtgggactcattctcagccctcagctccaggcctggcgaatctatgtcatctatcacccaagcc--tcagtgattagcttgaggatagaggcacgacccagtccagaccaatcatagcgaatccctgggtttttgctggagctg--------------ctctccatggatggttgaatcaataggat---------ataagtcttgagctactgggggctgtctcagtgtctctaggttgagaatggagctaacacaggggaaagcagagctgaaatatggagagagccagacgatgcttga---tgatgtttgagcacctggatccagccatg i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5948234 589 - 181584905 aacatttctaacaaaacacagctct-tatctgttctatgtattgggttccatgtattgtttattgaaaagt----aaagttttccgctacta-aaGGTATCAAAATCTGCGATGGAGTTTGAAGTCAGAatcttacaggtggg-gaactcaagggctggagaggagaaataacacctccagggtcacatagctgaggcagggctaaaaTCCTCC------------GTAGTTTTATCCTGTcctttcttttggtaacggcagctgaatttcctcctcttcctgctcaggccacatgcttcgtgtgggactcattctcagccctcagctccaggcctggcgaatctatgtcatctatcacccaagcc--tcagtgattagcttgaggatagaggcacgacccagtccagaccaatcatagcgaatccctgggtttttgctggagctg--------------ctctccatggatggttgaatcaataggat---------ataagtcttgagctactgggggctgtctcagtgtctctaggttgagaatggagctaacacaggggaaagcagagctgaaatatggagagagccagacgatgcttga---tgatgtttgagcacctggatccagccatg i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 978584 589 - 16193990 aacatttctaacaaaacacagctct-tatctgttctatgtattgggttccatgtattgtttattgaaaagt----aaagttttccgctacta-aaGGTATCAAAATCTGCGATGGAGTTTGAAGTCAGAatcttacaggtggg-gaactcaagggctggagaggagaaataacacctccagggtcacatagctgaggcagggctaaaaTCCTCC------------GTAGTTTTATCCTGTcctttcttttggtaacggcagctgaatttcctcctcttcctgctcaggccacatgcttcgtgtgggactcattctcagccctcagctccaggcctggcgaatctatgtcatctatcacccaagcc--tcagtgattagcttgaggatagaggcacgacccagtccagaccaatcatagcgaatccctgggtttttgctggagctg--------------ctctccatggatggttgaatcaataggat---------ataagtcttgagctactgggggctgtctcagtgtctctaggttgagaatggagctaacacaggggaaagcagagctgaaatatggagagagccagacgatgcttga---tgatgtttgagcacctggatccagccatg i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1799478 589 - 21434487 aacatttctaacaaaacacagctct-tatctgttctatgtattgggttccatgtattgtttattgaaaagt----aaagttttctgctacta-aaGGTATCAAAATCTGGGATGGAGTTTGAAGTCAGAatcttacgggtggg-gaactcaaggactggagaggagaaataacacctccagggtcacatagctgaggcagggctaaaaTCCTCC------------GTAGTTTTATCCTGTcctttcttttggtaacggcagctgaatttcctcctcttcctgctcaggccacatgcttcgtgtgggactcattctcagccctcagctccaggcctggtgaatctatgtcatctatcacccaagcc--tcagtgattagcttgaggatagaggcacgacccagtccagaccaatcatagcgaatccctgggtttttgctggagctg--------------ctctccatggatggttgaatcaataggat---------ataagtcttgagctactgggggctgtctcagtgtctctaggttgagaatggagctaacacaggggaaagcagagctgaaatatggagagagccagacgatgcttga---tgatgtttgagcacctggatccagccatg i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4761890 589 - 82825804 gacatttctaacaaaacacagctct-tatctgttctatgtattgggttccatgtattgtttattgaaaagt----aaagttttctgctacta-aaGGTATCAGAATCTGCGATGGCGTTTGAAGTCAGAatcttacaggtggg-gaactcaagggctggagaggagaaataacacatccagggccacatagctgaggcagggctaaaaTCCTCC------------GTAGTTTTATCCTGTcctttcttttggtaacggcagctgaatttcctcctcttcctgctcaggccacatgcttcgtgtgggactcattctcagccctcagctccaggcctggcgaatctatgtcatctatcactcaagcc--tcagtgattagcttgaggatagaggcacgacccagtccagaccaatcatagcgaatccctgggtttttgctggagctg--------------ctctccatggatggttgaatcaataggat---------ataagtcttgagctactgggggctctctcagtgtctctaggttgagaatggagctaacacaggggaaagcagagctgaaatgtggagagagccagacgatgcttga---tgatgtttgagcacctggatccagccatg i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 267834 589 + 2521317 aacatttctaataaaacacagctct-tatctgttctatgtattgggttccgtgtattgtttattgaaaagt----aaagttttctgctacta-aaggtatcaaaatcTGCGATGGAATTTGAAGTCAGAatcttacaggtggg-gaactcaagggctggagaggagaaataacacctccagggtcacatagctgaggcagggctaaaaTCCTCC------------GTAGTTTTATCCTGTcctttcttttggtaacggcagctgaatttactcctcttcctgctcaggccacatgcttcgtgtgggactcattctcagccctcagctccaggcctggcgaatctatgtcatctatcacccaagcc--tcagtgattagcttgaggatagaggcacgacccagtccaaaccaatcatagcgaatccctgggtttttgctggagctg--------------ctctccatggatggttgaatcaataggat---------ataagtcttgagctactgggggctgtgtcagtgtctctaggttgagaatggagctaacacaggggaaagcagagctgaaatatggagagagccagacgatgcttga---tgatgtttgagcacctggatccagccatg i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1749223 601 - 2415367 aacatttctaacaaaacacagctct-tatctgttctatgtattgggttccaagtactgtttcttgaaaagt----gaagttttctgctataa-aaggtatcaaaatcCACGATTGAGTTTGAAGTCAGAatcttacaggtggg-gaactcaagggctggagaggagaaataacatgtccagggtcacatagctgaggcagggctaaaaTCCCGCATAGGGACATTGGTAGTTTTATCCTGTcctttcttttggtaacagcagctgaatttcctcctcttcctgctcaggccacatgcttcgtgtgggactcgttctcagccctcagctccaggcctggcgaatctatatcatctatcacccaagcc--tcagtgattagcttgaggatggatgcacgacccagtccagaccagtcacagcgaatccctgggtttttgctggagctg--------------ctctccatggatggttgaatcaataggat---------ataagtcttgagctactgggggctgtctcagtgtttctaggttgagaatggagctaacacaggggaaagcagagctgaaatatggagagagccagacgatgcttga---tgatgtttgagcacctggatccagccatg i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64092227 602 + 204313951 AACATTTCTAATCAAACATAGCTCT-TATCTATCCTATGTATTGGGTTCCATGTATTGTTTATTGAAAAGTAAAAAAAGTTTTCTGCTACAA-AAGGCATCAAAATCAGCGATTGAGTTTGAAGTCAGAatcttacaggtggg-gaactcaagagctggagaggagaaataacttttccagggtcacatagctgaggcagggctAAAGTCCAGCATAGggacatctgtagttttaccctgtcctttcttttggtaacagcagctgaatttcttcatcttcctgctcaggtcacatgctgcatatgggactcattctcatccctcagctccaggcctggtgaatctatatcatctttcacctaggcc--tcagtaattagcctgaggatggttgcatgacccagtccagac---tcacagctaatccctgcgtttttgctggagctG--------------CTCTCCATGGACGGTTGAATCAACaggat---------ataagtctcgaactactgggggctgtctcagtatttccaggtggagaatgcagctaacacaggggaaagcagagcagaaatatggagtgagccagatgatgcttga---tgatgttcgagtacctggatccagccatg i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2217974 602 + 10068113 aatatttctaataaaacatagctct-tatctatcctatatattgggttccatg--ttgtttattgaaaagtaaaaagagttttctgctacaa-aa-gcatcaaaaTGAGCAACTGAGTTTGAAGTCAGAatcttacacgtggg-gaactcaagggctggagaggagaaataacttttccagggtcacatacctgaggcagggctAAACTCCAGCATAGggacacctgtagttttaccctgtcctttcttttggtaacggcagctaaatttcttcgtcttcctgctcaggtcacatgctgcatgtgggactcactttcatccctcagctccaggcctggtgaatctatatcatctatcacctaggcc--tcggtaattagcctgaggatggatgcatgacccagtccagaccagtcacagctaatccctgcgtttttgctggagctG--------------CTCTCCATGGACGGTTGAATCAACaggat---------ataagtctcgaactactgggggctgtctcagtatttccaggttgagaatgcagctaacacagggggaagcagagcagaaatatggagtgagccagatgatgcttga---tgatgtttgagcacctggatccagccatg i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 73258 604 - 709587 AACATTTCTAATAAAACATAGCTCT-TATCTATCCTATGTATTGGGTTCCATGTATTGTTTATTGAAAAGTAAAAAAAGTTTTCTGCTACAA-AAGGCATCAAAATCAGTGATTGAGTTTGATGTCAGAatcttacaggtggg-gaactcaagggctggagaggagaaataacttctccggggtcacatagctgaggcagggctaaagtccagcatagggacatctgtagttttaccctgtcctttcttttggtaacggcagctgaatttcttcatcatcctgctcaggtcacatgctgcatgtgggactcattctcatccctcagctccaggcctggtgaatctatatcatctatcacctaggcc--tcagtaattagcctgaggatggatgcacgacccagtctagaccaatcacagctaatccctgcatttttgctggagctG--------------CTCTCCATGGACGGTTGAATCAAtaggat---------ataagtcttgaa-tactgggggctgtctcagtatttccaggttgagaatacagctaacacaggggaaagcagagcagaaatatggagcgagccagatgatgcttga---tgatgtttgagcacctggatccagccatg i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1173540 602 - 2246441 AACATTTCTAATAAAACATAGCTCT-TATCTATCCTATGTATTGGGTTCCATGTATTGTTTATTGAAAAGTAAA---AGTTTTCTGCTACAA-AAGGCATAAAAATCAGCAATTGAGTTTGAAGTCAGAatcttacaggtggg-gaactcaagggctggagaggagaaataacttttccagagtcacatagctgaggcaggactaaagtccagCATAGGGACATCTGTAGTTTTACCCTGTCCTTTCTTTTGGTAATGGCAGCTGAATTTCTTCATCTTCCTGCTCAGGTCACATGCTGCATGTGGGACTCATTCTCATCCCTCAGCTctaggcctggtgaatctatatcatctatcacctaggcc--tcagtaattagcctgaggatggatgcatgacccagtccagaccaatcacagctaatccctgcgtttttgctggagctG--------------CTCTCCATGGACGGTTGAATCAAtaggat---------ataagtctcgtactattgggggctgtctcagtatttccaggttgagaatgcagctaacacaggggaaagcagagcagaaatatggagcgagccagatgatgcttga---tgatgtttgagcacctggatccagccatg i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1243206 596 + 48283576 AAAATTTCTAACAGAACATAGCTCT-TATCTGTTCTA--TACTAGATTCCATGTATTATTTATTGAAAAGTTAA-AACTTCTGCTACTACAA-AAGATATCAAAATCAGTGATTGAGTTTAAAGTCCGAATCATGC---------------agggccagaaaggagaaatgactagtccaggatcacatagctgagacagggctagaattcagcctacggacatctgtggttttagccagtcctttctttTGGTAAGCACAATAGAATTTTCCCATTTTCCTACTCAGGCCACACGTCTCATGTGAGACTCATTCTCATCCTTCAGCTTcagccctgactaatatatataatgtatcattcaggcc--tcgatgattagc---ataatgaacgtatgacccagtaaggggcaattacagctaattcttgaatttttgctgaagctgctgaaaaatagtcactctccataggttgttgagtcaataggct---------attagcccccagctgatggaggctgtattagtacatctagattatgaatgaagctaacacaagggaaagtagaactgaaagatggagagagacacatgatgcttga------tgtttgagcacctggatgtagctatg i otoGar3.GL873522 C 0 C 0 s mm10.chr13 65993847 569 - 120421639 AACATTT-TAACAGAACAGAGCTTTCTGTTTGTCCT--GTATTGGGTTCCTTTTATCATTTATCGAAATCTAAA-GCATTCTTTTGCTTCTAGAAGGTTCCAGAATCAGCTACTGACTTTAAGTT--GGACTTTATAGAAGGGAGGACTTCGGGTCCCAAGAGAGGCAAT---TTGCCTGGGGCTACTGAATGGCAGCAAAGCTAGACTCCAAC--TCTGATATCTATAGCTGGA----GCCCTTTCTATTG----------TTGAATATTCCCATCACCCTTCTAGACACACGTGTTTCATGCAAGACTTGTCTTCACCTCTCAGCCCCACACCTGCCTATTTTGTACAATTTGTCACCCAGCTC--GCAGTGATTATATTTGTGATGGTCATGTGACCCAGAATGATCACACTCCAGTGGGTCCCAGCATCTTTGCTGTATCTC--------------C------TGGGCTGTTGAATCAACGTGGC--------------TCATTATTTTCAGGGGACTCTTCCAGCTCATCTAGATTAGAaatggagcca--ggcgtgggaagcagagcggaag-atgctggcaggcagtgggatggagt---cagtgtctgagtacctggatccagccatg i mm10.chr13 I 2677 C 0 s canFam3.chr4 37174608 611 + 88276631 ----TTTCTAAGAAAACATAGCTCT-TATCTCTTCTA--TATCAAGCTCCATATATTATTAATTGAAAAGC----AAAAATTTCTGCTGCTATAACATATAAAAGTCAGTGATTGAGCTTGAtgtccaaatcttacagatgag-gaacttataagtcagagaagagcagtgatttgtccaacatcacatagatgaggttgggctagaatccagtgtagggatatctgtaattttagcctgccctttcTTTCAGTAATGGATGTTGAATTTCCCCATCCTCAGACTCAGGGCGTATGCTTCATGCAGAACTCATCCTCATCTCTCA----TAAG---GGCTAATCTATGTGATCT---AATCAGGCTAATcattgattagcttgatggtggacatatga-ccagttgggatcaatcaaaattcatccctggatttttgctgggcctaatggaaaacagtcactcttcacaggttgttgaatctgtgacatatccatgggatgtgtctccagttgct-gatgccatcttagcacatctaaattgagaatgaacccaatacag-ggagagcagaattgaaagatggagagagacagatgatatttgatattgttgtttgagtacctagatccagccatg i canFam3.chr4 C 0 C 0 e proCoq1.NW_012152163v1 767590 6023 - 940639 I e dasNov3.JH562710 200546 62042 - 960158 I a score=4153945.000000 s hg38.chr5_KI270795v1_alt 62242 359 + 131892 cctgaa--------------------------------gttgg-aactttt---------------------------------------------------------agttaca------------------------------------------------------------------------------------------tgaaccaataagttccct------ttt-g-gtttatgt-------cagttttgattggtattct------------------------gacttacaCATACGGTTTTGTGCTTTTTTTCACC-------AAGggacaggaattactg-tatttttctg-t-------tttactgataaggaaatggaggctcagTCCATTTGTAATCAGATGCTTCAAGTCTCACCAGATTCAAGGCTTGATGACCTCTCTTTTGTGTTGGGAATGCCCCACACAGGAACTCTTGTTTGCTTCTGCCCCCTGCTTCCGTGCAGACACACTCTATCCT--GTTTCACAAGGGGGTGGTAAA--------CCACT----ACAGAGTAGGTACGAAAACATCGCTGAAATGAaata s panTro5.chr5 5312447 359 - 181907262 cctgaa--------------------------------gttgg-agctttt---------------------------------------------------------agttaca------------------------------------------------------------------------------------------tgaaccaataagttccct------ttt-g-gtttatgt-------cagttttgactggtattct------------------------gacttacaCATACGGTTTTGTGCTTTTTTTCACC-------AAGggacaggaattactg-tatttttctg-t-------tttactgataaggaaatggaggctcagTCCATTTGTAATCAGATGCTTCAAGTCTCACCAGATTCAAGGCTTGATGACCTCTCTTTTGTGTTGGGAATGCCCCACACAGGAACTCTTGTTTGCTTCTGCCCCCTGCTTCCGTGCAGACACACTCTATCCT--GTTTCACAAGGGGGTGGTAAA--------CCACT----ACAGAGTAGGTGCTAAAACATCGCTGAAATGAaata i panTro5.chr5 C 0 C 0 s panPan2.chr5 5574961 359 - 183735486 cctgaa--------------------------------gttgg-agctttt---------------------------------------------------------agttaca------------------------------------------------------------------------------------------tgaaccaataagttccct------ttt-g-gtttatgt-------cagttttgactggtattct------------------------gacttacaCATACGGTTTTGTGCTTTTTTTCACC-------AAGggacaggaattactg-tatttttctg-t-------tttactgataaggaaatggaggctcagTCCATTTGTAATCAGATGCTTCAAGTCTCACCAGATTCAAGGCTTGATGACCTCTCTTTTGTGTTGGGAATGCCCCACACAGGAACTCTTGTTTGCTTCTGCCCCCTGCTTCCGTGCAGACACACTCTATCCT--GTTTCACAAGGGGGTGGTAAA--------CCACT----ACAGAGTAGGTGCTAAAACATCGCTGAAATGAaata i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1704919 359 + 3967317 cctgaa--------------------------------gttgg-agctttt---------------------------------------------------------agttaca------------------------------------------------------------------------------------------tgaaccaataagttccct------ttt-g-gtttatgt-------cagttttgactggtattct------------------------gacttacaCATACGGTTTTGTGCTTTTTTTCACC-------AAGggacaggaattactg-tatttttctg-t-------tttactgataaggaaatggaggctcagTCCATTTGTAATCAGATGCTTCAAGTCTCACCAGATTCAAGGCTTGATGACCTCTCTTTTGTGTTGGGAATGCCCCACACAGGAACTCTTATTTGCTTCTGCCCCCTGCTTCCATGCAGACACACTCTATCCT--GTTTCACAAGGGGGTGGTAAA--------CCACT----ACAGAGTAGGTGCTAAAACATCGCTGAAATGAaata i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4581542 367 + 163208435 cctgaa--------------------------------gttgg-agctttt---------------------------------------------------------agtcaca------------------------------------------------------------------------------------------tgaaccagtaagttccct------ttt-g-gtttatgt-------cagtttTGACTGATATTCT------------------------GACTTACACGTATGGTTTTGTGCTTTTTTTCACC-------AAGggacaggaattactg-tatttttctg-t-------tttactgataaggaaatggaggctcaATCCATTTGTAATCAGATGCTTCAAGTCTCACCAGATTCAAGGCTTGACGACCTCCCTTTTGTGTTGGGAATGCCCCACACAGGAACTCTTGTTTGCTTCTGTCCCCTGCTTCCGTGCAGACACACTCTATCCT--GATTCACAAGGGGGTGGTAAACACAATATCCACT----ACAGAGTAGGTGCTAAAACATCGCTGAAATGAaata i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5762585 367 - 180051392 cctgaa--------------------------------gttgg-atctttt---------------------------------------------------------agttaca------------------------------------------------------------------------------------------tgaaccaataagttccct------ttt-t-gtttatgt-------cagttttgactgattttct------------------------gacttataCATACGATTTTGTGCTTTTTTTCACC-------AAGggacaggaattactg-tatttttctc-t-------tttactgataaggaaatggaggctcagTCCATTTGTAATCAGATGCTTCAAGTCTCGCCAGATTCAAGATTTGATGACCTCCCTTTTGTGTTGGGAATGGCCCACACAGGAACTCTTCTTTGCTTCTGCCCCCTGCTTCAGTGCAGACACACTCTATCCT--GTTTCACAAGGGGGTGGTAAACACAATATCCACT----ACAGAGTAGGTGCTAAAACATTGCTGAAATGAAATA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5948823 367 - 181584905 cctgaa--------------------------------gttgg-atctttt---------------------------------------------------------agttaca------------------------------------------------------------------------------------------tgaaccaataagttccct------ttt-t-gtttatgt-------cagttttgactgattttct------------------------gacttataCATACGATTTTGTGCTTTTTTTCACC-------AAGggacaggaattactg-tatttttctg-t-------tttactgataaggaaatggaggctcagTCCATTTGTAATCAGATGCTTCAAGTCTCGCCAGATTCAAGATTTGATGACCTCCCTTTTGTGTTGGGAATGGCCCACACAGGAACTCTTCTTTGCTTCTGCCCCCTGCTTCAGTGCAGACACACTCTATCCT--GTTTCACAAGGGGGTGGTAAACACAATATCCACT----ACAGAGTAGGTGCTAAAACATTGCTGAAATGAAATA i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 979173 367 - 16193990 cctgaa--------------------------------gttga-atctttt---------------------------------------------------------agttaca------------------------------------------------------------------------------------------tgaaccaataagttccct------ttt-t-gtttatgt-------cagttttgactgattttct------------------------gacttataCATACGATTTTGTGCTTTTTTTCACC-------AAGggacaggaattactg-tatttttctg-t-------tttactgataaggaaatggaggctcagTCCATTTGTAATCAGATGCTTCAAGTCTCGCCAGATTCAAGATTTGATGACCTCCCTTTTGTGTTGGGAATGGCCCACACAGGAACTCTTCTTTGCTTCTGCCCCCTGCTTCAGTGCAGACACACTCTATCCT--GTTTCACAAGGGGGTGGTAAACACAATATCCACT----ACAGAGTAGGTGCTGAAACATTGCTGAAATGAaata i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1800067 367 - 21434487 cctgaa--------------------------------gttgg-atctttt---------------------------------------------------------agtcaca------------------------------------------------------------------------------------------tgaaccaataagttccct------ttt-t-gtttatgt-------cagttttgactgattttct------------------------gACTTATACATACGATTTTGTGCTTTTTTTCACC-------AAGggacaggaattactg-tatttttctg-t-------tttactgataaggaaatggaggctcagTCCATTTGTAATCAGATGCTTCAAGTCTCGCCAGATTCAAGATTTGATGACCTCCCTTTTGTGTTGGGAATGGCCCACACAGGAACTCTTCTTTGCTTCTGCCCCCTGCTTCAGTGCAGGCACACTCTATCCT--GTTTCACAAGGGGGTGGTAAACACAATATCCACT----ACAGAGTAGGTGCTAAAACATTGCTGAAATGAAATA i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4762479 367 - 82825804 cctgaa--------------------------------gttgg-atctttt---------------------------------------------------------agtcaca------------------------------------------------------------------------------------------tgaaccaataagttccct------ttt-t-gtttatgt-------cagttttgactgattttct------------------------gacttataCATACGGTTTTGTGCTTTTTTTCACC-------AAGggacaggaattactg-tatttttctg-t-------tttactgataaggaaatagaggctcagTCCATTTGTAACCAGATGCTTCAAGTCTCGCCAGATTCAAGATTTGATGACCTCCCTTTTGTGTTGGGAAGGGCCCACGCAAGAACTCTTCTTTGCTTCTGCCCCCTGCTTCAGTGCAGACACACTCTATCCT--GTTTCACAAAGGGGTGGTAAACACAATATCCACT----ACAGAGTAGGTGCTAAAACATTGCTGAAATGAAATA i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 268423 367 + 2521317 cctgaa--------------------------------gttgg-atatttt---------------------------------------------------------agtcaca------------------------------------------------------------------------------------------tgaaccaataagttccct------ttt-t-gtttatgt-------cagttttgactgattttct------------------------gACTTATACATACGATTTTGTGCTTTTTTTCACC-------AAGggacaggaattactg-tatttttctg-t-------tttactgataaggaaatggaggctcagTCCGTTTGTAATCAGATGCTTCAAGTCTCCCCAGATTCAAGATTTGATGACCTCCCTTTTGTGTTGGGAACGGCCCACACAGGAACTCTTCTTTGCTTCTGCCCCCTGCTTCAGTGCAGACACACTCTATCCT--GTTTCACAAGGGGGTGGTAAACACAGTATCCACT----ACAGAGTAGGTGCTAAAACATTGCTGAAATGAaata i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1749824 365 - 2415367 cctgaa--------------------------------gttag-agctttt---------------------------------------------------------agtcaca------------------------------------------------------------------------------------------tgaaccaataagttccct------ttt-t-gtttatgt-------cagttttgactgattttct------------------------gacttacaCATACGGTTTTGTGCTTTTCTTCACC-------AAGGGACAGGAATTACTG-TATTTTTCTG-T-------TTTACTGATAAGGAAATGGAGGCTGAGTCCATTTGTAATCAGATGCTTCAAGTCTTGCCAGA-TCAAGATTTGATGACCTCCCTTTTGTGTTGGGAGTGGCCCACACAGGAACTCCTCTTTGCTTCTG-GCCCTGCTTCAGTGCAGACACACTCTGTCCT--GTTTCACAAGGGGGTGATAAACACAATATCCACT----ACAGAGTAGGTGCTAAAACATTGCTGAAATGAAATA i colAng1.NW_012115755v1 C 0 I 314 s calJac3.chr2 64092829 387 + 204313951 cctgaa--------------------------------gttga-agctttt---------------------------------------------------------agtcaca------------------------------------------------------------------------------------------tgaatcagtaagtttcct------ttt-t-gtttatgc-------cagctttgactgattttctgtcactatcaactaaaactaccctggcttatacaTACGGTTTTCTGCTTTTTCTCACC-------AAGGGACAGGAAT------TATTTTTCTGTT-------TTTACTGATAAGGAAATGGAGGTTCAATCCATTTGTAATCGGATGCTTCAAGTCTCGCCAGATTTAAGGCTTGGTGACCTCCCTTTTGTGTTGGGAATGGCCCACACAGGAACTGTTCTTTGCTTCTGGCCCCTGCTTCAGTGCAGACGCACTCTATCCT--GTTTCACAACACAGTGTTGAACATAATATCCACT----GCAGAGTAGATGCTAAAACATTGCTAAAACaaaata i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2218576 384 + 10068113 cctgaa--------------------------------gtcga-agctttt---------------------------------------------------------agtcaca------------------------------------------------------------------------------------------tgaaccagtaagtttcct------ttt-t-gtttatgc-------cagttttgactgatttgctgtcactagcaactaaagctaccctgacttatacaCATGGTTTTCTGCTTTTTCTCACC-------AAGAGTCAGGAAT------TACTTTTCTG-T-------TTTACTGTTAAGGAAATGGAGGCTCAATCAATTTGTAATTAGATGCTTCAAGTCTCGCCAGATTTAAGGCTTGGTGACCTCCCTTTTGTGTTGGGAATGGCCCACACAGGAACTGTTCTTTGCTTCTGGCCCCTGCTTCAGTGCAGACGCACTCTATCCT--GTTTCACA--ACAGTGTTGACCATGATATCCACT----GCAGAGTAGGTGCTAAAACATTGCTGAAACAAaata i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 73862 385 - 709587 cctgaa--------------------------------gttga-agctttt---------------------------------------------------------agtcaca------------------------------------------------------------------------------------------tgaaccagtaagtttcct------ttt-t-atttatgc-------cagtttctactgattttctgtcactagcaactaaaactaccc-gacttatacaTACGGTTTTCTGCTTTTTCTCACC-------Acggaacaggaat------tatttttctg-t-------tttactgataaggaaatggaggctcaATCCATGTGTAATCAGATGCTTCAAGTCTCGCCAGATTTAAGGCTTGGTGACCTCCCTTTTGTGTTGGGAATGGCCCACACAGGAACTGTTCTTTGCTTCTGGCCCCTGCTTCAGTGCAGACGCACTCTATCCT--GTTTCACAACGGAGTGTTGAACATGATATCCACT----GCAGAGCAGATGCTAAAACATTGCTGAAACAAaata i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1174142 386 - 2246441 cctgaa--------------------------------gttga-agctttt---------------------------------------------------------agtcaca------------------------------------------------------------------------------------------tgaaccagtaagcttcct------ttt-t-gtttatgc-------cagttttgactgattttctgtcactagcaactaaaactaccctgacttatacaTACAGTTTTCTGCTTTTTCTTACC-------AAGggacaggaat------tatttttctg-t-------tttactgataaggaaatggaggctcaATCCATTTGTAATCAGATCCTTCAAGTCTCACCAGATTTAAGGCTTGGTGACCTCCCTTTTGTGTTGGGAATGGCCCACACAGGAAATGTTCTTTGCTTCTGGCCCCTGCTTCAGTGCAGACGCACTCTATCCT--GTTTCACAGCAGAGTGTTGAACACAATATCCGCT----GCAGAGCAGGTGCTAAAACATTGCTGAAACAAaata i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1243802 345 + 48283576 cctgaa--------------------------------gcccatgagtttt---------------------------------------------------------aattatg------------------------------------------------------------------------------------------taagccaataggtttcct------ttt-tggtttatgt-------cattttttattgatttcctgtcacttgcacctgaagctaccctgacttatccaTACTTTACTGTGCTTTTTTCCATG-------AAGGGACAGGAGTTACTG-TATTTTTCTA-T-------TTTATTGATAAGGC-----------------TTTATAATCAGGTGCTTCAAGCCTGGCAGGATTCAAG---------TCCTTCTTTGGT-----------------------CTCTTCAAAGCCTCTAGCCCCCACCCTAGTGTAGACATAGTCTCACCTAAGTTTCACAATGGAGTGCTATACACAGTA-TCATC----ACAGAGTAGGTGctaaaacattgctgaaatgaaata i otoGar3.GL873522 C 0 C 0 s mm10.chr13 65994416 342 - 120421639 cccaaa--------------------------------gccag--------------------------------------------------------------------------------------------------------------------------------------------------------------------aATCAGCAAGTTTCCT------TTTGT-GCTTTTGTTTTGTTGTTGTTTTGATTGACATTTT-----CAACACTTGAACCT-----GACTCATACACACCACT---GACACTTTCTCATC-------AAAGGATAGGAGT-CCCG-GACTTTTGTT-TGGCATTGTTTTCTCATGATACCAAGGAGGTTAG-----CTTGTGATCAAATGCTTCCAGTCTTGTGAGATTCAAGGCC--GTGACTCCC--------TCAGGAACAG-CCACACAGTAGCTCTATGCTGCCTTTA-ACCCTGACAGAGTCCAGATGC-------CCT-----------TGGAGTCCTGACCACAACAGTCACCGAAAACTGAGTTGCTACTGAAGCATTGCTGAAATG----- i mm10.chr13 C 0 C 0 s canFam3.chr4 37175219 539 + 88276631 cctaaatgcatttctttttttctgtttatgccaatttttttga-agtttttttttttttaagattttattaatttattcatgagagacagagagagagagagaggcagagacacaggcagagggagaagcagggtccatgcagggagcccgatgcgggactcgatcccaggtctcgaggatcacaccctgggctgaaggtggtgctaaaccgctgaaccacccgggttgccc-t-gattatgc-------caattttggttgactttctgtcacttgcacctggaattactctgacttatacaAACTATTTTGTGCTTCCCCCCCCCCCCCATTAACAGATAGGAATTACTGATTTTTTTCTA-T-------TTTACTGGTAAAGAAAA----------------------------------------------TCAAGGCTTGGTGA-CTCTCTTTTGTCTTGGGAATGTCCCATATGGGAACTCTTCATTGCCTCCAATGCCTACTCGTGTGTGGACATACTTTATCCTAAGTTTCACGAAGGGTTGTTGAGCACAATATCCATG----ACAGAGTAGGTGCTCAAACATTGTTGAAGTAAAGCA i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 262588 381 - 960158 cctgat--------------------------------gtctg-cactttt---------------------------------------------------------aatcaca------------------------------------------------------------------------------------------taagccaataaatttcct------ttt-c------tgt-----------ttagattgattttctatcgcttgcaactgaaactaccctaacttatataTGCTCTTTGGCGCTTTTT-TCACT-------AAAGGGAAGGATTTAATG-TATTTTTCTA-C-------TTTG-TGATGAAGAAATGGAGGCCCAGAACATTTGTAATCAGGTGCATCAAATCTCACAGGATTGAAGGCTTGGTGACCCCCCTTTTGCCTTGGGAATGCCCCACACATGAGCCCTTCCTTGCTTCTAGCCCCCATCCTGGTGCAGACATACTCCATCCCAAGCTTCATCAGGAAGTG-TAAACACAATGTCTACC----aaagagtaggtgctaaaacattgtgaaaataaagcc i dasNov3.JH562710 I 62042 C 0 e proCoq1.NW_012152163v1 767590 6023 - 940639 I a score=4269679.000000 s hg38.chr5_KI270795v1_alt 62601 384 + 131892 aggaaagaataccccttt-------------------aaagaaacggtgtaaagtgtataatgaggcgattc------atcaaaaaa--tg---------caaatgacttagccctaaaagata-ccaacttcactaataatt-aagaaatacaaataaaacagctatcatctttcactcatgagtttgtcaaagagctaaaggtttcctgacagctgagggcagggaaatagtctctttcctgggctg-aggcagtaggaggggaaggg-gcaca-gcctctttggagggcactgtggcaatgtctgtgaaa--------tgtaaac---agtgtacaagccattt--gccctccagtttagaatgtattctacaaagaaactccaacaaatacgcagagatgc--aagtaaaagactgtccagtagagaattattttt---------------------------------------------------------------- s panTro5.chr5 5312806 384 - 181907262 aggaaagaataccccttt-------------------aaagaaacggtgtaaagcgtataatgaggcgattc------atcaaaaaa--tg---------caaatgacttagccctaaaagata-ccaacttcactaataatt-aagaaatacaaataaaacagcaatcatctttcactcatgagtttgtcaaagagctaaaggtttcctgacagctgagggcagggaaatagtctctttcctgggctg-aggcagtaggaggggaaggg-gcaca-gcctctttggagggcactgtggcaatgtctgtgaaa--------tgtaaac---agtgtacaagccattt--gccctccagtttagaatgtattctacaaagaaactccaacaaatatgcagagatac--aagtaaaagactgtccagtagagaattattttt---------------------------------------------------------------- i panTro5.chr5 C 0 C 0 s panPan2.chr5 5575320 384 - 183735486 aggaaagaataccccttt-------------------aaagaaacggtgtaaagtgtataatgaggtgattc------atcaaaaaa--tg---------caaatgacttagccctaaaagata-ccaacttcactaataatt-aagaaatacaaataaaacagctatcatctttcactcatgagtttgtcaaagagctaaaggtttcctgacagctgagggcagggaaatagtctctttcctgggctg-aggcagtaggaggggaaggg-gcaca-gcctctttggagggcactgtggcaatgtctgtgaaa--------tgtaaac---agtgtacaagccgttt--gccctccagtttagaatgtattctacaaagaaactccaacaaatatgcagagatgc--aagtaaaagactgtccagtagagaattattttt---------------------------------------------------------------- i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1705278 383 + 3967317 gggaaagaataccccttt-------------------aaagaaacggtgtaaagtgtataatgaggcgattc------atcaaaaaa--tg---------caaatgacttagccctaaaagata-ccaacttcactaataatt-aagaaatacaaatgaaacagctatcatctttcactcatgagtttgtcaaagagctaagggtttcctgacagctgagggcagggaaatagtctctttcctgggctg-aggcagtagga-gggaaggg-gcaca-gcctctctggagggcactgtggcaatgtctgcgaaa--------tgtaaac---agtgtacaagccattt--gccctccagtttagaatgtattctacaaggaaactccaacaaatatgcagagatgc--aagtaaaagactgtccagtagagaatgattttt---------------------------------------------------------------- i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4581909 384 + 163208435 agggaagaataccccttt-------------------agaaaaacggtgtaaagtgtataataaggcggttc------atcaaaaca--tg---------caaatgacttagccctaaaagata-ccaacttcactaataatt-aagaaatacaaataaaacagctatcatctttcactcatgagtttgtcaaagagttaaaggtttcctgacagctgagggcagggaaataggctctttcctgggctg-aggcagtaggaggggaaggg-gcaca-gcctctttgcagggcactgtggcaatgtctgtgaaa--------tgtaaac---agtgtacgagccattt--gccctccagtttagaatgtattctacaaagaaactccaataaatatgcagagatgc--aagtaaaagactgtccagtagagaattattttt---------------------------------------------------------------- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5762952 387 - 180051392 AGGAAAGAATGCCCCTTT-----------------aaaaaaaaactgtgtaaagtgtataatgaggcagttc------atcaagaaa--tg---------caaatgactcagccctaaaagatacccagcttcactaataatt-aagaaatacaaataaaacagctatcatctttcactcatgagtttgtcaaggagctaaaggtttcctaacagctgagggcagggaaataggctgtttcctgggctg-aggcagcaggaggggaaggg-gcaca-gtctctttggagggctgtgtggcaatgtctgtgaaa--------tgtaaac---agtgtacaagccattt--gccctccagtttagaatgtattctacaaagaaactccaacaaatacgcagagatgc--aagtagaaagctgtccagtcgagaattattttt---------------------------------------------------------------- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5949190 387 - 181584905 AGGAAAGAATGCCCCTTT-----------------aaaaaaaaactgtgtaaagtgtataatgaggcagttc------atcaagaaa--tg---------caaatgactcagccctaaaagatacccagcttcactaataatt-aagaaatacaaataaaacagctatcatctttcactcatgagtttgtcaaggagctaaaggtttcctaacagctgagggcagggaaataggctgtttcctgggctg-aggcagcaggaggggaaggg-gcaca-gtctctttggagggctgtgtggcaatgtctgtgaaa--------tgtaaac---agtgtacaagccattt--gccctccagtttagaatgtattctacaaagaaactccaacaaatacgcagagatgc--aagtagaaaactgtccagtagagaattattttt---------------------------------------------------------------- i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 979540 387 - 16193990 aggaaagaatgccccttt-----------------aaaaaaaaactgtgtaaagtatataatgaggcagttc------atcaagaaa--tg---------caaatgactcagccctaagagatacccagcttcactaataatt-aagaaatacaaataaaacagctatcatctttcactcatgagtttgtcaaggagctaaaggtttcctaacagctgagggcagggaaataggctgtttcctgggctg-aggcagcaggaggggaaggg-gcaca-gtctctttggagggctgtgtggcaatgtctgtgaaa--------tgtaaac---agtgtacaagccattt--gccctccagtttagaatgtattctacaaagaaactccaacaaatacgcagagatgc--aagtagaaagctgtccagtagagaattattttt---------------------------------------------------------------- i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1800434 388 - 21434487 AGGAAAGAATGCCCCTTT----------------Aaaaaaaaaactgtgtaaagtgtataatgaggcagttc------atcaagaaa--tg---------caaatgactcagccctaaaagatacccagcttcactaataatt-aagaaatacaaataaaacagctatcatctttcactcatgagtttgtcaaggagctaaaggtttcctaacagctgagggcagggaaataggctgtttcctgggctg-aggcagcaggaggggaaggg-gcaca-gtctctttggagggctgtgtgacaatgtctgtgaaa--------tgtaaac---aatgtacaagccgttt--gccctccagtttagaatgtattctacaaagaaactccaacaaatacgcagagatgc--aagtagaaagctgtccagtagagaattattttt---------------------------------------------------------------- i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4762846 388 - 82825804 AGGAAAGAATGCCCCTTT----------------Aaaaaaaaaactgtgtaaagtgtataatgaggcggttc------atcaagaaa--tg---------caaatgactcagccctaaaagatacccagcttcactaataatt-aagaaatacaaataaaacagctatcatctttcactcatgagtttgtcaaggagctaaaggtttcctaacagctgagggcagggaaataggctgtttcctgggctg-aggcagcaggaggggaaggg-gcaca-gtctctttggagggctatgtagcaatgtctgtgaaa--------tgtaaac---agtgtacaagccattt--gccctccagtttaaaatgtattctacaaagaaactccaacaaatacgcagagatgc--aagtagaaagctgtccagtagagaattattttt---------------------------------------------------------------- i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 268790 387 + 2521317 aggaaagaatgccccttt-----------------aaaaaaaaactgtgtaaagtgtataatgaggcagttc------atcaagaaa--tg---------caaatgactcagccctaaaagatacccagcttcactaataatt-aagaaatacaaataaaacagctatcatctttcactcatgagtttgtcaaggagctaaaggtttcctaacagctgagggcagggaaataggctgtttcctgggctg-aggcagcaggaggggaaggg-gcaca-gtctctttggagggctgtgtgacaatgtctgtgaaa--------tgtaaac---agtgtacaagccgttt--gccctccagtttagaatgtattctacaaagaaactccaacaaatacgcagagatgc--aagtagaaagctgtccagtagagaattattttt---------------------------------------------------------------- i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1750503 386 - 2415367 aggaaagaATGCCCCTTT------------------AAaaaaaactgtgtaaagtgtataatgaggcggttc------atcaagaaa--tg---------caaatgacttagccctaaaagatacccagcttcactaataatt-aagaaatacaaataaaacagctatcatctttcactcatgagtttgtcaaggagctcaaggtttcctaacagctgagggcagggaaataggctgtttcctgggctg-aggcagcaggaggggaaggg-gcaca-gtctcttcggagggctgtgtggcaatgtctgtgaaa--------tgtaaac---agggtacaacccattt--gccctccagtttagaatgtattctacaaagaaactccaacaaatacgcagagatgc--aagtaaaaagctgtccagtagagaattattttt---------------------------------------------------------------- i colAng1.NW_012115755v1 I 314 C 0 s calJac3.chr2 64093216 374 + 204313951 aggaaagaatacccctat--------------------aaaaagctgtgtaaagtgtataatgaggcggttc------atcaaaaaa--ca---------caaatgacatatctctaaaagatgcccaacttcagtaataaat-aagaaatacaaactaagt----atcatctt----tcatgagtttgtcaaagagctaaaggtttcctaatagctgagggcagggaaataggctctttcttgggctg-tggcagtagcaggggaaggg-gcaca-gcatctttggagggcagtgtagcaatgtctgtaaaa--------tgtaaac---agtgtacaagccatct--gccctccagtttagaatctattctccaaagaaactccaacaaatatgcagagatgc--aagtaaaaggctgttcagtagag--ttattttt---------------------------------------------------------------- i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2218960 383 + 10068113 aggaaagaata-ccctac--------------------aaaaagctgagtaaagtgtataatgaagcggttc------atcaaaaaaagcg---------caaatgacatctctctaaaagatgcccaacttcagtagtaaat-aagaaatacaaacaaagcaaagaccatctttcactcatgagtttgtcaaagagctaaaggtttcctaacagctgagggcagggaaataggctctttcttgggctg-tggcagtagcaggggaaggg-acaca-gcatctttggaggccagtgtggcaatgtctgtgaga--------tgtaaac---agtggacaagccatct--gtcctccagtttagaacctattctccaaagaaactccaacaaatatgcaaagacgc--aggtaaaaggctgttcagtagag--ttattttt---------------------------------------------------------------- i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 74247 374 - 709587 aggaaagaaca-ccctac--------------------aaaaagctgtgtaaagtgcataatgaagtggttc------atcaaaaaa--cg---------caaatgacatatctctaaaagatgcccaacttcagtaataaat-aagaaatacaaacaaagcaacgatcatctt----tcatgagtttgtcaaagagctaaagctttcccaacagctgagggcagggaaataggctctttcttgggctg-tggcagtagcaggggaaggg-gcaca-gcatctttggagggcagtgtggcaatgtctgtgaaa--------tgtaaac---agtgtaccagccattt--gctctccagtttagaatctattctccaaaggaactccaacaaatatgcagagatgc--aag-aaaaagctgttcagt--ag--ttattttt---------------------------------------------------------------- i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1174528 378 - 2246441 aggaaagaatg-ccctac--------------------aaaaagctgtgtaaagtgcataatgaagcggttc------atcaaaaaa--ca---------caaatgacatatctctaaaagatgcccaacttcagtaataaat----aaatacaaacgaagcaactatcatctttcactcatgagtttgtcaaagagctaaaggtttcctaacagctgagggcagggaaataggctctttcttgggctg-tggcggtagcaggggaaggg-gcaca-gcatctttggagggcagtgtggcaatgtctgtgaaa--------tgtaaac---agtgtacaagccattt--gccctccggtttagaatctattctccaaagaaactccaacaaatatgcagagatgc--aagtaaaaggctgttcagtagag--ttattttt---------------------------------------------------------------- i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1244147 371 + 48283576 ----aagactacccctac-----------------------------tgaaaaatgt---gtgaagtagttccctg-aaaaaagaaa--ca---------caaatgagacatacctaaaagatacccgacttcactaataatt-aagaaatacaaataaaacagatcttgtcttttactcatgagtttgtcaaagagctagaacttccttaatttctgagactggggaaataggcattttcccaagctg-gtatggtagaaagagaagggagcaca-gcctctttggagg-tagttgggcaatgtctgttgaactaatgtctttgaacctaagtgcacaag-tgttt--gccctccttctgggaatttattctacaaataaaatccaacaaatatgcaatgatgc--aaataaaa------------gagaattatttgt---------------------------------------------------------------- i otoGar3.GL873522 C 0 C 0 s mm10.chr13 65994758 365 - 120421639 -GAAAGAAATATTTCTACaaacaaaacaaaacaaaacaaaacaaCTGTGCCA--TGTGTGATGAACAAGCTCTCAG-AAATAGGATG--TA---------CAGACAACGCA---CTAACAGATATTTAATGTCACTAA---------GACTACCAGGAAAACAGATG----CTGTCACCAGTGGGT--------GCGGTAAAGGTT-------ATCTGGGAGTGGGGAAACG------TTCACGGGCTGCTGGAAATGGAAGAGTAATGT-GGCCT-TGCCTTTCAGAAAATAACTTGGTAGTGACC-----A--------TTCA------AGTGGAGAAGACATGTAAGCCTTCCTGCTTAGAACTTACACTATAAATAAATGTTGATGACTCTGCAAAGATGT--TAAGTAGATGCAGAAGGGTAGGAACGtatttgt---------------------------------------------------------------- i mm10.chr13 C 0 C 0 s canFam3.chr4 37175758 359 + 88276631 aagaaagaacacccctac--------------------aaaaaagtgtgcaaagtgtatgaagaggcagttc------acagaaaaa--agaaatatagacaacaaacacacacctgaaaaatgtccaatctcactaataatt-aagaatcacaaataaagataagatccattttcactcatgagtttgttaaagagctaaatattgcctaacacctggggctgaggagacagacattttcatgggctg----------------------gcacatgcttctttggagggtaatttggcaatgtctgttgaa--------tgtaaa----aatgca-----cgttt-------cctgcttgaaatttactttacaggtaaacaccaacaaatatgcaaagatgc--aagtaaaaggctgttcagtacaatatta----t---------------------------------------------------------------- i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 262969 402 - 960158 -gggaagaatacccccaa-------------------caagaaaatgtgcaaagcatgtgaagaggcagttcgtagaaaaaaagaaa--ta---------tgaatgaaaatcacctaaaagatgctgaatctcactaataattttagaaatacaaataaaaatgagatcat-tttcaccc--------------------aGGGTTTCCTAACACttg------------------------------g-tggaaggaaggtaagaagag-----a-cccttttccgagaacaagttggtaatgtctgttaaa--------ggtgaaa---aatgcacaagctgttt--aatcttctgtttagaatagattctacaaataaatgccatcaactatgcaaagatgcaaaagtagaaggatgttcagtatagtattatttataatagcaaataactggaaacaaatgtctatcaaaaggggacaatgaaattgtcgtaaaattttt i dasNov3.JH562710 C 0 I 124 e proCoq1.NW_012152163v1 767590 6023 - 940639 I a score=140188.000000 s hg38.chr5_KI270795v1_alt 62985 24 + 131892 aatagcaaaa------a-----ccaaaaccaaaac---- s panTro5.chr5 5313190 24 - 181907262 aatagcaaaa------a-----ccaaaaccaaaac---- i panTro5.chr5 C 0 I 2 s panPan2.chr5 5575704 24 - 183735486 aatagcaaaa------a-----ccaaaaccaaaac---- i panPan2.chr5 C 0 I 2 s gorGor5.CYUI01015413v1 1705661 24 + 3967317 aatagcaaaa------a-----ccaaaaccaaaac---- i gorGor5.CYUI01015413v1 C 0 I 2 s nomLeu3.chr2 4582293 24 + 163208435 aatagcaaaa------g-----ccaaaaccaaaac---- i nomLeu3.chr2 C 0 I 2 s rheMac8.chr6 5763339 20 - 180051392 aatagcaaaa------a-----ccaaaaccg-------- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5949577 20 - 181584905 aatagcaaaa------a-----ccaaaaccg-------- i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 979927 20 - 16193990 aatagcaaaa------a-----ccaaaaccg-------- i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1800822 20 - 21434487 aatagcaaaa------a-----ccaaaaccg-------- i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4763234 20 - 82825804 aatagcaaaa------a-----ccaaaaccg-------- i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 269177 20 + 2521317 aatagcaaaa------a-----ccaaaaccg-------- i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1750889 20 - 2415367 aatagcaaaa------a-----ccaaaacca-------- i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64093590 25 + 204313951 aatagaaaaa------aaccccccaaaacct-------- i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2219343 25 + 10068113 catagaaaaa------aaccccccaaaacct-------- i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 74621 31 - 709587 aatagaaaaaaaAAACAAAACCCCAAAGCCT-------- i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1174906 25 - 2246441 aatagaagaa------aaccccccaaaacct-------- i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1244518 11 + 48283576 aacagccaaa------a---------------------- i otoGar3.GL873522 C 0 C 0 s mm10.chr13 65995123 11 - 120421639 aatagcaaaa------a---------------------- i mm10.chr13 C 0 C 0 s canFam3.chr4 37176117 20 + 88276631 aacagcaaaa------a-----ctgaaaaca-------- i canFam3.chr4 C 0 I 238 s dasNov3.JH562710 263495 24 - 960158 AATAGCCAGA------A-----ATAACAGCT----ATGT i dasNov3.JH562710 I 124 C 0 e proCoq1.NW_012152163v1 767590 6023 - 940639 I a score=258066.000000 s hg38.chr5_KI270795v1_alt 63009 25 + 131892 aaagaaaacaaaacaaaactgga--------aa s panTro5.chr5 5313216 25 - 181907262 aaagaaaacaaaacaaaactgga--------aa i panTro5.chr5 I 2 C 0 s panPan2.chr5 5575730 25 - 183735486 aaagaaaacaaaacaaaactgga--------aa i panPan2.chr5 I 2 C 0 s gorGor5.CYUI01015413v1 1705687 25 + 3967317 aaagaaaacaaaacaaaactgga--------aa i gorGor5.CYUI01015413v1 I 2 C 0 s nomLeu3.chr2 4582319 25 + 163208435 aaagaaaacaaaacaaaactgga--------aa i nomLeu3.chr2 I 2 C 0 s rheMac8.chr6 5763359 25 - 180051392 aaagaaaacagaacaaaactgga--------aa i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5949597 25 - 181584905 aaagaaaacagaacaaaactgga--------aa i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 979947 25 - 16193990 aaaaaaactagaacaaaactgga--------aa i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1800842 25 - 21434487 agagaaaacagaacaaaactgga--------aa i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4763254 25 - 82825804 aaagaaaacagaacaaaactgga--------aa i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 269197 25 + 2521317 aaagaaaacagaacaaaactgga--------aa i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1750909 25 - 2415367 aaagaaaacagaacaaaactgga--------aa i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64093615 25 + 204313951 aaagaaaagaaaacaaaactgga--------aa i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2219368 25 + 10068113 aaagaaaagaaaacaaaactgga--------aa i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 74652 25 - 709587 AAAGAAAAGAAAACAAAACTGGA--------AA i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1174931 25 - 2246441 aaagaaaagaaaagaaaactgga--------aa i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1244529 33 + 48283576 aaataaaaaataaaaaaacataatctcccccac i otoGar3.GL873522 C 0 C 0 s mm10.chr13 65995134 9 - 120421639 ----------------tactggt--------ca i mm10.chr13 C 0 C 0 s dasNov3.JH562710 263519 25 - 960158 ACAGAAGGGGAAACAGAGATGGA--------GA i dasNov3.JH562710 C 0 I 105 e canFam3.chr4 37176137 238 + 88276631 I e proCoq1.NW_012152163v1 767590 6023 - 940639 I a score=209504.000000 s hg38.chr5_KI270795v1_alt 63034 19 + 131892 caaatgc-----c-----------------------------------caccaaaatgg s panTro5.chr5 5313241 19 - 181907262 caaatgc-----c-----------------------------------caccaaaatgg i panTro5.chr5 C 0 C 0 s panPan2.chr5 5575755 19 - 183735486 caaatgc-----c-----------------------------------caccaaaatgg i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1705712 19 + 3967317 caaatgc-----c-----------------------------------caccaaaatgg i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4582344 18 + 163208435 caaatg------c-----------------------------------caccaaaatgg i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5763384 19 - 180051392 caaatgc-----c-----------------------------------caccaaaatgg i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5949622 19 - 181584905 caaatgc-----c-----------------------------------caccaaaatgg i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 979972 19 - 16193990 caaatgc-----c-----------------------------------caccaaaatgg i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1800867 19 - 21434487 caaatgc-----c-----------------------------------caccaaaatgg i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4763279 19 - 82825804 caaatgc-----c-----------------------------------caccaaaatgg i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 269222 19 + 2521317 caaatgc-----c-----------------------------------caccaaaatgg i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1750934 19 - 2415367 caaatgc-----a-----------------------------------caccaaaatgg i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64093640 19 + 204313951 caaatgc-----c-----------------------------------caccaaaatgg i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2219393 19 + 10068113 caaatgc-----c-----------------------------------caccaaaatgg i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 74677 19 - 709587 CAAATGC-----C-----------------------------------CACCATAATGG i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1174956 19 - 2246441 caaatgc-----c-----------------------------------caccaaaatgg i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1244562 24 + 48283576 cagatgagttaga-----------------------------------caccagatgag i otoGar3.GL873522 C 0 I 7 s mm10.chr13 65995143 19 - 120421639 caatcac-----c-----------------------------------cagcgaaaggg i mm10.chr13 C 0 I 4 s dasNov3.JH562710 263649 54 - 960158 caaatac-----cactttggatgaattgtatgctttattaatatgtatcaataaaatgg i dasNov3.JH562710 I 105 C 0 e canFam3.chr4 37176137 238 + 88276631 I e proCoq1.NW_012152163v1 767590 6023 - 940639 I a score=933251.000000 s hg38.chr5_KI270795v1_alt 63053 81 + 131892 gtctacacgaa----------ccccagt--acatccaag-acatggaagatatttta---gctgcaaaaaagaatgaggtagccccagatgtgtggg s panTro5.chr5 5313260 81 - 181907262 gtctacaggaa----------ccccagt--acatccaag-acatggaaaacatttta---gctgcaaaaaagaatgaggtagccccagatgtgtggg i panTro5.chr5 C 0 C 0 s panPan2.chr5 5575774 81 - 183735486 gtctacacgaa----------ccccagt--acctccaag-acatggaagatatttta---gctgcaaaaaagaatgaggtagccccagatgtgtggg i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1705731 81 + 3967317 gtctacacgaa----------ccccagt--acatccaag-acatggaagatatttta---gctgcaaaaaagaatgaggtagccccacatgtgtggg i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4582362 80 + 163208435 gtctacacgaa----------ccccagt--acatccaag-acatggaaaacatgtta---gcagcgaaaaagaatgaggta-ccccagatgtgtggg i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5763403 79 - 180051392 atctgcacgaa----------tcccagt----atccaag-acatggaaaacatttta---gctgctagaaagaatgaggcagccccagatgtgtggg i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5949641 79 - 181584905 atctgcacgaa----------tcccagt----atccaag-acatggaaaacatttta---gctgctagaaagaatgaggcagccccagatgtgtggg i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 979991 79 - 16193990 atctgcacaaa----------tcccagt----atccaag-acatggaaaacatttta---gctgctagaaagaatgaggcagccccagatgtgtggg i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1800886 79 - 21434487 atctgcacgaa----------tcccagt----atccaag-acatggaaaacatttta---gctgctagaaagaatgaggcagccccagatgtgtggg i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4763298 79 - 82825804 atctgcacgaa----------tcccagt----atccaag-acatggaaaacatttta---gctgctagaaagaatgaggcagccccagatgtgtggg i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 269241 79 + 2521317 atctgcacgaa----------tcccagt----atccaag-acatggaaaacatttta---gctgctagaaagaatgaggcagccccagatgtgtggg i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1750953 81 - 2415367 gtctacacgaa----------ttccagt--acatccaag-acatggaaaacatttta---gctgctagaaagaatgaggcagccccagatgtgtggg i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64093659 81 + 204313951 gtctacatgaa----------tcccagt--acatccaag-tcatggaaaacattttt---gctgctaaaaagaatgaggaagtcccagatgcatggg i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2219412 82 + 10068113 gtctacatgaa----------tcccagt--acatccaagttcatggaaaacactttc---gctgctaaaaagaatgaggaagtcccagatgcgtggg i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 74696 80 - 709587 GTCTACATGAA----------TCCCAGT--ACAT-CAAG-TCATGGAAAACATTTTC---GCTGCTAAAAAGAATGAGGAAGTCCCAGATGTGTGGG i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1174975 81 - 2246441 gtctacatgaa----------tcccagt--acatccaag-tcatagaaaacattttc---gctgctaaaaagaatgacgaagtcccagatgtgtggg i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1244593 81 + 48283576 gtctgcacaaa----------tctcagt--acttccaaa-ccatggactacatctca---gataccggaaagaatgaggtagtcccagatgtgcgga i otoGar3.GL873522 I 7 C 0 s mm10.chr13 65995166 80 - 120421639 gtttttatcaa----------tcccaag--acatccaga-cca-agaatcaattcca---gttgctaaaaagaatgaggccactctggatgtaTAGG i mm10.chr13 I 4 C 0 s canFam3.chr4 37176375 84 + 88276631 gtctaaatgaa----------tcacagt--gcatccaaa-ctatggaatacatttcagctgctgctgagaagaatgaggtagccctggaggtgtggg i canFam3.chr4 I 238 C 0 s dasNov3.JH562710 263703 85 - 960158 atttgttaaaaaaGGGGGGGGGCACTGTCTACATCCAAA-CCATGGAATGAAATCTA---GCTGTT----AGAATGAGGAGGCCCCATATGTG---- i dasNov3.JH562710 C 0 C 0 e proCoq1.NW_012152163v1 767590 6023 - 940639 I a score=2206110.000000 s hg38.chr5_KI270795v1_alt 63134 164 + 131892 ggtggaaaggtgcccaggg--tataccatgtcgttaggggagaaccggatgtgtgatatgatgctatttatgct------gaaaaTGAAATCTTACCAGAGTTAAGATGAAGATAAGTTGTGAAGTAGAA-TTAGGGGGTCAGGGGACTTCTGTTTTCAATGAATTAA----TCTTT s panTro5.chr5 5313341 164 - 181907262 ggtggaaaggtgcccaggg--tataccatgtcgttaggggagaaccggatgtgtgatatgatgctatttatgct------gaaaaTGAAATCTTACCAAAGTTAAGATGAAGACAAGTTGTGAAGTAGAA-TTAGGGGGTCAGGGGACTTCTATTTTCAATGAATTAA----TCTTT i panTro5.chr5 C 0 C 0 s panPan2.chr5 5575855 167 - 183735486 ggtggaaaggtgcccaggg--tataccatgtcgttaggggagaaccggatgtgtgatatgatgctatttatgct------gaaaaTGAAATCTTACCAAAGTTAAGATGAAGATAAGTTGTGAAGTAGAA-TTAGGGGGTCAGGGGACTTCTGTTTTCAATGAATTAA-TCTTCTTT i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1705812 167 + 3967317 ggtggaaaggtgcccaggg--tataccatgtcgttaggggagaaccggatgtgtgatatgatgctatttatgct------gaaaaTGAAATCTTACCAAAGTTAAGATGAAGATAAGTTGTGAAGTAGAA-TTAGGGGGTCAGGGGACTTCTGTTTTCAATGAATTAA-TCTTCTTT i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4582442 161 + 163208435 ggtggaaaggtgcccaggg--tataccgtgtcattaggggagaaccggatgtgtgatatgatgctatttatgct------gaaaaTGAAATCTTACCAAAGTTAAGATGCAGATAAGTTGGAAAGTAGAA-TTAGGGGGTCAGGGGACTTCTGTTTC--ATG-ATTAA----TCTTT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5763482 166 - 180051392 ggtggaaaggtggccaggg--tatagcatgtggctgggggagaacaggatgtgtgatatgatgccatttatgct------gaaaaTGAAATCTAATCAAAGTTAAGATGAAGATAAGTTGGGAAGTAGAA-TTAGGGGGTCAGGGGACTTCTA-TTTCAATGAATTAA-TCCTCTTT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5949720 166 - 181584905 ggtggaaaggtggccaggg--tatagcatgtggctgggggagaacaggatgtgtgatatgatgccatttatgct------gaaaaTGAAATCTAATCAAAGTTAAGATGAAGATAAGTTGGGAAGTAGAA-TTAGGGGGTCAGGGGACTTCTA-TTTCAATGAATTAA-TCCTCTTT i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 980070 166 - 16193990 ggtggaaaggtggccaggg--tataccatgtggttgggggagaacaggatgtgtgatatgatgccatttatgct------gaaaaTGAAATCTAATCAAAGTTAAGATGAAGATAAGTTGGGAAGTAGAA-TTAGGGGGTCAGGGGACTTCTA-TTTCAATGAATTAA-TCCTCTTT i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1800965 169 - 21434487 ggtggaaaggtggccagggtatataccatgtggttgggggagaacaggatgtgtgatatgatgctatttatgct------gaaaaTGAAATCTAATCAAAGTTAAGATGAAGATAAGTTGGGAAGTAGAA-TTAGGGGGTCAGGGGACTTCTATTTTCAATGAATTAA-TCCTCTTT i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4763377 167 - 82825804 ggcggaaaggtggccaggg--tataccacgttgttaggggagaacaggatgtgtgatatgatgctatttatgct------gaaaaTGAAATCTAATCAAAGTTAAGATGAAGATAAGTTGGGAAGTAGAA-TTAGGGGGTCAGGGGACTTCTATTTTCAATGAATTAA-TCTTCTTT i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 269320 167 + 2521317 ggtggaaaggtggccaggg--tataccatgtggttgggggagaacaggatgtgtgatatgatgctatttatgct------gaaaaTGAAATCTAATCAAAGTTAAGATGAAGATAAGTTGGGAAGTAGAA-TTAGGGGGTCAGGGGACTTCTATTTTCAATGAATTAA-TCCTCTTT i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1751034 168 - 2415367 ggtggaaaggtggccaggg--tataccatgtcgttaggggagaacaggatgtatgatatgatgctatttatgct------gaaaaTGAAATCTAATCAAAGTTAAGATGAAGATAAGTTGGGAAGTAGAATTTAGGGGGTCAGGGGACTTCTATTTTCAATGAATTAA-TCTTCTTT i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64093740 167 + 204313951 ggtggaaaggtgcccaggg--taaactatgtcgttaggggagaacagggtgTGTGATGTGATGCTATTTATGTT------GAAAATGAAATCTTACCAAAGTTAAGATGGAGATAAGTTGGGAAGAAGAA-TTAGGGAATCAGGAGAGTTCTATTTTCAATAAATTAA-TCTTCTTT i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2219494 163 + 10068113 gctgaaaaggtgcccatgc--taaactatgtcgttaggggagaacaggatgtgtgatgtgatgctatttatgtC------GGAAATGAAATCTTATCAAAGTTAAGATGAAGATAAGGTGGGAAGTAGAA-TTAGGGAATCAGGGAAGTTCTATTTTC----AATCAA-TCTTCTTT i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 74776 167 - 709587 GGTGGAAAGGTGCCCAGGG--TAAACTATGTCGTTAGGGGAGAACAGGATGTGTGATGTGATGCTATTTATGTC------GAAAATGAAATCTTACCAAAGTTAAGATGAAGATAAGTTGGGAAGTAGAA-TTAGGGAATCAGGGAAGTTCTATTTTCAATAAATTAA-TCTTCTTT i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1175056 167 - 2246441 ggtggaaaggtacccaggg--taaactatgtcgttaggggagaacaggatgtgtgatgtgatgctatttatgtt------gaaaaTGAAATCTTACCAAAGTTAAGATGAAGATAAGTTGGGAAGTAGAA-TTAGGGAATCAGGGAAGTTCTATTTTCAATAAATTAA-TCTTCTTT i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 773613 164 - 940639 ggtggaaaggtggccaggg--cataccatgtctttaagggagaacaggctgtgtgatatgatgccatttatgttgaaac-aaaAGTGAAATGTTAC------TAAGATGAAGATAAGTTGGGAAGCAGGA-TTAGGGGGTCAGGTGAC--TTATTTTCAACGAATTAA-TGTTCTTT i proCoq1.NW_012152163v1 I 6023 C 0 s otoGar3.GL873522 1244674 166 + 48283576 ggcagaaaggtgtccaggg--tataccatgtcgctaagggagaacaggatgt-tgACGTGATGCTATTTGTATTGAAACAAAAAATGAAATCTTAC------TAAGATGAAAATAGGTTGGGAAGTAGGA-TTAAGAGGTCAGGAAACTTTTATTTTTAATGAATTAA-TCTTCTTT i otoGar3.GL873522 C 0 C 0 s mm10.chr13 65995246 131 - 120421639 GACGGGAAGGTGTTGAGGG--TGTAC---------------------------------GACGCTATTAATGTGGAGAC-GAAAATAATATCTTCCCAAAGTTAAGATG-----AAGTTGGGAAGTAGGA-CTAGGGAGCCAGGGGACTTTAATTTCTGACTAATTAA-TTTTC--- i mm10.chr13 C 0 I 146 s canFam3.chr4 37176459 164 + 88276631 tgtggaaaggtgtctaggg--tacaccatattggtaggggagaacagGATGGGTGGCACAATGCTGTTTGTGTTGAAAC-AAAAATGAAATCTTACCAAAATTCAGATGAAATTCAGTTAGAACGTTGAA-ATAATGGATAAGGAGA-TTTTATCTTCAACTTACtaa-t------- i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 263788 152 - 960158 -------------CCAGGG--TGTACCA--TCGTTA-GGGAGAACAGAATGTGTGACATGATGTTATTTGTGCA--AAC-AAAAGCTAGATCTCACCAAAGTGAAACTGAAGATAAActggggagcagga-ttagggggttggaggactgtcattttcaat---ttaactcttcttc i dasNov3.JH562710 C 0 C 0 a score=192166.000000 s hg38.chr5_KI270795v1_alt 63298 12 + 131892 ACAATTTGATTT s panTro5.chr5 5313505 12 - 181907262 ACAATTTGATTT i panTro5.chr5 C 0 C 0 s panPan2.chr5 5576022 12 - 183735486 ACAATTTGATTT i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1705979 12 + 3967317 ACAATTTGATTT i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4582603 11 + 163208435 AC-ATTTGATTT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5763648 12 - 180051392 ACAATTTGATTT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5949886 12 - 181584905 ACAATTTGATTT i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 980236 12 - 16193990 ACAATTTGATTT i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1801134 12 - 21434487 ACAATTTGATTT i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4763544 12 - 82825804 ACAATTTGATTT i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 269487 12 + 2521317 ACAATTTGATTT i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1751202 12 - 2415367 ACAATTTGATTT i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64093907 12 + 204313951 ACAATTTGATTT i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2219657 12 + 10068113 ACAATTTGATTT i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 74943 12 - 709587 ACAATTTGATTT i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1175223 12 - 2246441 ACAATTTGATTT i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 773777 12 - 940639 ACAATTTGATTT i proCoq1.NW_012152163v1 C 0 C 0 s otoGar3.GL873522 1244840 12 + 48283576 ACAATTTGATTT i otoGar3.GL873522 C 0 C 0 s canFam3.chr4 37176623 10 + 88276631 --aattagattt i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 263940 12 - 960158 acaatttgattt i dasNov3.JH562710 C 0 C 0 e mm10.chr13 65995377 146 - 120421639 I a score=86240.000000 s hg38.chr5_KI270795v1_alt 63310 6 + 131892 -TTTAAA s panTro5.chr5 5313517 6 - 181907262 -TTTAAA i panTro5.chr5 C 0 C 0 s panPan2.chr5 5576034 6 - 183735486 -TTTAAA i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1705991 6 + 3967317 -TTTAAA i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4582614 6 + 163208435 -TTAAAA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5763660 6 - 180051392 -TTAAAA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5949898 6 - 181584905 -TTAAAA i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 980248 6 - 16193990 -TTAAAA i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1801146 6 - 21434487 -TTAAAA i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4763556 6 - 82825804 -TTAAAA i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 269499 6 + 2521317 -TTAAAA i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1751214 6 - 2415367 -TTAAAA i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64093919 6 + 204313951 -TTTAAA i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2219669 6 + 10068113 -TTTAAA i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 74955 6 - 709587 -TTTAAA i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1175235 6 - 2246441 -TTTAAA i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 773789 6 - 940639 -TTTAAA i proCoq1.NW_012152163v1 C 0 I 303 s otoGar3.GL873522 1244852 6 + 48283576 -TTTTAA i otoGar3.GL873522 C 0 C 0 s mm10.chr13 65995523 6 - 120421639 -ttaaaa i mm10.chr13 I 146 C 0 s canFam3.chr4 37176633 6 + 88276631 -ttaaaa i canFam3.chr4 C 0 I 1 s dasNov3.JH562710 263952 7 - 960158 ttttaaa i dasNov3.JH562710 C 0 C 0 a score=3472543.000000 s hg38.chr5_KI270795v1_alt 63316 336 + 131892 ATTATGAAAATAAGC-ACCTTACTATTT-GTTTA----------------------CTCATTTGAATACC--------------------CAATA-----------AT------GCAC--------AAAAAT---TCAGAAGGCACAAGGTGGAGATGTATAATTCTGCAGGTCTC----T-C-AACTATCTGATACAGAATTAATTTATTCCCGGCATGCATTTAGTGTATT------TAGAAGAAGGAGGAG-----------AAGTGAGTGAGAAA---GGG-----------------TGGGGGACACA-----CGCAGCGGCTGCTCTGCGGTCGGCAGCTGTGGTCAGGT---GTGGAGGTG-GG------------------------------------------------------------------------------CTGCCCTTTTTGGGGTCA--CTCTATCCTTGGTTTCCTGGCATCAGGCCTTCC-TAACCCCGCTGGAGCAG-TAGTGAAGGACTTTGGTGATG s panTro5.chr5 5313523 335 - 181907262 ATTATGAAAATATGC-ACCTTACTATTT-----A----------------------CTCATTTGAATACC--------------------CAATA-----------AT------GCAC--------AAAAAT---TCAGAAGGCACAAGGTGGAGATGTATAATTCTGCAGTTCTC----T-C-AACTATCTGATATAGAATTAATTTATTCCCGGCATGCATTTAGTGTATT------TAGAAGAAGGAGGAGGAG--------AAGTGAGTGAGAAA---GGG-----------------TGGGGGACACA-----GGCAGCGGCTGCTCTGCGGTCGGCAGCTGTGGTCAGGT---GTGGAGGTG-GG------------------------------------------------------------------------------CTGCCCTTTTTGGGGTCA--CTCTATCCTTGGTTTCCTGGCATCAGGCCTTCC-TAACCCCGCTGGAGCAG-TAGTGAAGGCCTTTGGTGATG i panTro5.chr5 C 0 C 0 s panPan2.chr5 5576040 335 - 183735486 ATTATGAAAATATGC-ACTTTACTATTT-----A----------------------CTCATTTGAATACC--------------------CAATA-----------AT------GCAC--------AAAAAT---TCAGAAGGCACAAGGTGGAGATGTATAATTCTGCAGTTCTC----T-C-AACTATCTGATACAGAATTAATTTATTCCCGGCATGCATTTAGTGTATT------TAGAAGAAGGAGGAGGAG--------AAGTGAGTGAGAAA---GGG-----------------TGGGGGACACA-----GGCAGCGGCTGCTCTGCGGTCGGCAGCTGTGGTCAGGT---GTGGAGGTG-GG------------------------------------------------------------------------------CTGCCCTTTTTGGGGTCA--CTCTATCCTTGGTTTCCTGGCATCAGGCCTTCC-TAACCCCGCTGGGGCAG-TAGTGAAGGCCTTTGGTGATG i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1705997 339 + 3967317 ATTATGAAAATAGGC-ACGTTACTATTT-GTTTA----------------------CTCATTTGAATACC--------------------CAATA-----------AT------GCAC--------AAAAAT---TCAGAAGGCACAAGGTGGAGATGTATAATTCTGCAGTTCTC----T-C-AACTATCTGATACAGAATTAATTTATTCCCGGCATGCATTTAGTGTATT------TAGAAGAAGGAGGAGGGG--------AAGCGAGTGAGAAA---GGG-----------------CGGGGGACACA-----GGCAGCGGCTGCTCTGCGGTCGGCAGCTGTGGTCAGGT---GTGGAGGTG-GG------------------------------------------------------------------------------CTGCCCTTTTTGGGGTCA--CTCTATCCTTGGTTTCCTGGCATCAGGCCTTCC-TAACCCCGCTGGAGCAG-TAGTGAAGGCCTTTGGTGATG i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4582620 342 + 163208435 ATTATGAACATATGC-ACCTTACTATTT-GTTTA----------------------CTCATTTGAATACC--------------------CAATA-----------AT------GCAC--------AAAAAT---TCAAAAGGCACAAGATGGAGATGCATAATTCTGCAGTTCTC----T-C-AACTATCTGATATAGAATTAATTTATTCCCGGCATGCATTTAGTGTATT------TAGAAGGAGGAGGAGGAG--------AAATGAGTGAGAAA---GGG-----------------TCGGGGACACA-----GGCAGCGGCTGCTCTGCGGTCGGCAGCTGTGGTCAGGTGTGGTGGAGGTG-GG------------------------------------------------------------------------------CTGCCCTTTTTGGGGTCA--CTCTATCCTTGGTTTCCTGGCATCAGGCCTTCC-TAACCCTGCTGGAGCAC-TAATGAAGGCCTTTGGTGATG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5763666 320 - 180051392 ATTATGAACA-------CTTTACAATTT-GTTTA----------------------CTCCTTTGGATAAC--------------------CAATA-----------AT------GCAC--------AAAA-T---TCAAAAGGC-CAAGGTGAAGATGTATAATTCTGCAGTTCTC----T-C--ACTATCTGAGATAGAATTAATT--ATTCCAGTATGCA-TTAGTGTA-T------TAGAAGGAGGAGGAGGAG---------AATGAGTGGGAAA---GGG-----------------TGGGGGACACA-----GGCAGCTGCTGCTCTGCGATCGGCAGCTGTGGTCAGGT---G-GGAGGTG-GG------------------------------------------------------------------------------CTGCCCTTTTTGGGGTCA--CTCTGTCCTTG--TTTCTGGCGCCAGGCCTTCC-TA--CCCACTGGAGCAC-TAGCAAAGGCCTTTGGTGATG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5949904 332 - 181584905 ATTATGAACA-------CTTTACAATTT-GTTTA----------------------CTCCTTTGGATACC--------------------CAATA-----------AT------GCAC--------AAAATT---TCAAAAGGCACAAGGTGAAGATGTATAATTCTGCAGTTCTC----T-C-AACTATCTGAGATAGAATTAATTTATTCCCAGTATGCATTTAGTGTATT------Tagaaggaggaggaggag---------aatgagtgagaaa---ggg-----------------tgggggaCACA-----GGCAGCTGCTGCTCTGCGATCGGCAGCTGTGGTCAGGT---GTGGAGGTG-GG------------------------------------------------------------------------------CTGCCCTTTTTGGGGTCA--CTCTGTCCTTGGTTTCCTGGCGCCAGGCCTTCC-TAACCCCACTGGAGCAC-TAGCAAAGGCCTTTGGTGATG i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 980254 332 - 16193990 ATTATGAACA-------CTTTACAATTT-GTTTA----------------------CTCCTTTGGATACC--------------------CAATA-----------AT------GCAC--------AAAATT---TCAAAAGGCACAAGGTGAAGATGTATAATTCTGCAGTTCTC----T-C-AACTATCTGAGATAGAATTAATTTATTCCCAGTATGCATTTAGTGTATT------Tagaaggaggaggaggag---------aatgagtgagaaa---ggg-----------------tgggggaCACA-----GGCAGCTGCTGCTCTGCGATCGGCAGCTGTGGTCAGGT---GTGGAGGTG-GG------------------------------------------------------------------------------CTGCCCTTTTTGGGGTCA--CTCTGTCCTTGGTTTCCTGGCGCCAGGCCTTCC-TAACCCCACTGGAGCAC-TAGCAAAGGCCTTTGGTGATG i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1801152 338 - 21434487 ATTATGAACATGTGC-TCTTTACAATTT-GTTTA----------------------CTCCTTTGGATACC--------------------CAATA-----------AT------GCAC--------AAAATT---TCAAAAGGCACATGGTGAAGATGTATAATTCTGCAGTTCTC----T-C-AACTATCTGAGATAGAATTAATTTATTCCCAGTATGCATTTAGTGTATT------Tagaaggaggaggaggag---------aatgagtgagaaa---ggg-----------------tgggggaCACA-----GGCAGCTGCTGCTCTGCGATCGGCAGCTGTGGTCAGGT---GTGGAGGTG-GG------------------------------------------------------------------------------CTGCCCTTTTTGGGGTCA--CTCTGTCCTTGGTTTCCTGGCGCCAGGCCTTCC-TAACCCCGCTGGAGCAC-TAGCAAAGGCCTTTGGTGATG i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4763562 338 - 82825804 ATTATGAACATGTGC-ACTTTACAATTT-GTTTA----------------------CTCCTTTGGATACC--------------------CAATA-----------AT------GCAC--------AAAATT---TCAAAAGGCACAAGGTGAAGATGTATAATTCTGCAGTTCTC----T-C-AACTATCTGAGATAGAATTAATTTATTCCCGGCATGCATTTAGTGTATT------Tagaaggaggaggaggag---------aatgagtgagaaa---ggg-----------------tgggggaCACA-----GGCAGCTGCTGCTCTGCGGTCGGCAGCTGTGGTCAGGT---GTGGAGGTG-GG------------------------------------------------------------------------------CTGCCCTTTTTGGGGTCA--CTCTGTCCTTGGTTTCCTGGCGTCAGGCCTTCC-TAACCCTGCTGGAGCAC-TAGCAAAGGCCTTTGGTGATG i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 269505 338 + 2521317 ATTATGAACATATGC-ACTTTACAATTT-GTTTA----------------------CTCCTTTGGATACC--------------------CAATA-----------AT------GCAC--------AAAATT---TCAAAAGGCACACGGTGAAGATGTATAATTCTGCAGTTCTC----T-C-AACTATCTGAGATAGAATTAATTTATTCCCAGTATGCATTTAGTGTATT------Tagaaggaggaggaggag---------aatgagtgagaaa---ggg-----------------tgggggaCACA-----GGCAGCTGCTGCTCTGCGATCGGCAGCTGTGGTCAGGT---GTGGAGGTG-GG------------------------------------------------------------------------------CTGCCCTTTTTGGGGTCA--CTCTGTCCTTGGTTTCCTGGTGCTAGGCCTTCC-TAACCCCGCTGGAGCAC-TAGCAAAGGCCTTTGGTGATG i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1751220 339 - 2415367 ATTATGAACATGTGC-ACTTTACAATTT-GTTTA----------------------CTCCTTTGGATACC--------------------CGATA-----------AT------GCAC--------AAAATT---TCAAAAGGCACAAGGTGAAGATGTAGAATTCTGCAGTTCTC----T-C-AACTATCTGAGATAGAATTAATTTATTCTCAGCATGCATTTAGTGTGTT------TAGAAGGAAGAGGAGGAG--------AAATGAGTGAGAAA---GGT-----------------TGGGGGACACA-----GGCAGCTGCTGCTCTGCGGTTGGCAGCTGTGGTCAGGT---GTGGAGGTG-GG------------------------------------------------------------------------------CTGCCCTTTTTGGGGTCA--CTCTGTCCCTGGTTTCCTGGCGTCAGGCCTTCC-TAACCCCGCCGGAGCAC-TAGCAAAGGCCTTTGGTGATG i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64093925 340 + 204313951 ATGATGAACATGTGC-ACTTTGTGATTTTGTTTA----------------------TTCATTTCAATATC--------------------CAATA-----------AT------GCAC--------AAAAAT---TCAAAAGGCACAAGGTGGAGATGTACAATTCTGCAATTCTC----T-C-AGCTATCTGATACAGAATTAATTTATTCCCAGCATGCATTTAGTGTATT------TCAAAGGAGGAGGAGGAG--------AAATGAGCGGGAAA---GGG-----------------CGGAGGACACA-----GGCAGCTGTTGCTCTGCGGTTGGCAGCTGTGGTCAGGT---GTGGCAGTG-GG------------------------------------------------------------------------------CTGCCCTTTTTGGGGTCA--CTCTGTCCTTGGTTTCCTGGTGTCAGGCCTTCC-TAACCCTTCTGAAGCTC-AAGGGAAGGCCTTTGGTGATG i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2219675 337 + 10068113 ATGATGAACATGTGT-ACCTTGTGATTTTGTTTA----------------------TTCATTTCAATACC--------------------CAATA-----------AT------GCAC--------AAAAAT---TCAAAAGGCGCAAGGTGGAGATGTATAATTCTGCAATTCTC----T-C-AACTATCTGATACAGAATTAATTTATTCCCAGCATGCATTTCGTGTGTT------TCGAAGGAGGAGGAGGAG--------ACATGAGCGGGAAA---GGGCGGTTCTGAAGTTCCTACGGAGGACACA--------------------------GGCAGCTGTGGTCAGGT---GTGGAGGTG-GG------------------------------------------------------------------------------CTGCCTTTTTGGGGGTCA--CTCTGTCCTTGGTTTCCCGGCGTCAGGCCTTCC-TAACCCCTCTGAAGCACTTAGGGAAGGCCCTTGATGATG i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 74961 340 - 709587 ATGATGAACATGTGC-TCCTTGTGATTTTGTTTA----------------------TTCATTTCAATGCC--------------------CAATA-----------AT------GCAC--------AAAAAT---TCAAAAGGCATAAGGTGGAGATGTATAATTCTGCAATTCTC----T-C-AACTATCTGATATAGAATTAATTTATTCCCAGCATGCATTTAGCGTATT------TTGAAGGAGGAGGAGGAG--------AAATGAGTGGGAAA---GGG-----------------CGGAGGACACA-----GGGAGCTGTTGCTCTGCGGTTGGCAGCTGTGGTCAGGT---GTGGAGGTG-GG------------------------------------------------------------------------------CTGCCCTTTTTGGGGTCA--CTCTGTCCTTGGCTTCCCGGCGTCAGGCCTTCC-TAACCCCTCTGAAGCAC-TAGGGAAGGCCTTTGGTGATG i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1175241 340 - 2246441 ATGATGAACATGAGC-ACCTTGTGATTTTGTTTA----------------------TTCATTTCAATACC--------------------CAATA-----------AT------GCAC--------AAAAAT---TCAAAAGGCACAAGGTGGAGATGCATAATTCTGCAATTCTC----T-C-AACTATCTGATACAGAATTAATTTATTCCCAGCATGCATTTAGTGTATT------TCGAAGGAGGAGGAGGAG--------AAATGAGCGGGAAA---GGG-----------------CGGAGGACACA-----GGCAGCTGTTGCTCTGCGGTTGGCAGCTGTGGTCAGGT---GTGGGGGTG-GG------------------------------------------------------------------------------CTGCCCTTTTTGGGGTCA--CTCTGTCCTTGGTTTCCTGGTGTCAGGCCTTCC-TAACCCCTCTGAAGCAC-TAGGGAGGGCCTTTGGTGATA i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1244858 289 + 48283576 ATTATAGGCATATACTACCTTACAGTTTTGTTTA----------------------TCTATTTGAATTCC-----------------TAGTAATA-----------AT------GCACAAGGTGAAAAAAAT---TCAAAAGGCCCAAGATGAAGGGGCACAATTCTCCAATTCTC----T-CCGACTATCTGATATAGAATTTATTTATTCATAGTGTGTCTGTGTTGCATT------TAGGAGGAGGAGGAA------------------------------------------------TGG--------------GCAGCTGCTGCT-------------CTGTGGCCAGGC---ATGGGCATG-GG------------------------------------------------------------------------------CTGCCCTTATTGGG------------------------GATGTGAGACTCTCG-AGATCCCATTGGAGCAT-TGGAAAAGGGCTTTGGGAGTG i otoGar3.GL873522 C 0 C 0 s mm10.chr13 65995529 451 - 120421639 ---attaaaataaaAAACTTTACaatttaatttaaaattttttttatCTTACACATTTCACTTGAAAACT---------------AGTATTAATA-----------ATCATGAAGTGA--------AAAAAA---TTTAAAGGCTCAAGG---AGACGTGC-------CAGTTATC----TGT-AACCAACTGGTATGGAATTAATTTATTCCTAGTGTGTACTTATTGCCTT------Taggaggaggagaaggaggaggaggggagggagggaggga---ggg-----------------aggaggaggaagaggaggaggaggaggaggaggggagggagggagagaggaagg---gaggaggag-gaagaggaggaagaagaggaggaggaagaggaggaggaaaaggaggagACAGAAGGCTGGAGGCCACTGGGGTCACCACTCTGTCTTTCTCAGAGTCATTCTTTGTACATGGG---CTGGCATGAGGCTTCCT-GAGCCCCGCTGAAGAAT-TTACAAA-GCCATGGGGGGTA i mm10.chr13 C 0 C 0 s canFam3.chr4 37176640 336 + 88276631 aatataaacatatat-tacttat--ttt-GTTTG----------------------CTTATTTGACTACCTTGAATCTGACTACCATTAATAATA-----------AT------GCATGAGGTGA-AAACATTCATCAAAACGCACAAAGGGAAG-TGTACAGTT-----ACCCTC----T-CCAGCTACCTGATAGAGAAGTAATGTATTCTTAGCATGTATTTCTGATATT------TGGAAGGAGGAGGGGGAA------GAGAATGAGTAAGAAGGGTGGA-----------------TGGGGTGCATT-----GGCTGATACT----------------CTGTGGCCAGGT---GTA-----G-GG------------------------------------------------------------------------------CTGCCCTTCTCAAGGTCATTCACTTTCTTTGGCTTCCAGGCATCAGGCACCCTGGAATCCCACTGATGTGC--------------TGGTGATG i canFam3.chr4 I 1 C 0 s dasNov3.JH562710 263959 319 - 960158 cttatgaacatgtattaccttACAATTTTGTTTA----------------------TTCATTTGAATACC--------------------TACTAGCAATCCCACGGT------AAAA--------AAAAAT---TCAAAA-GCACAAAGGGGAGGGGTACAGTTTACTAGCTCCCCTGTT-C-AGCTAACTGATAGAAAATTAATTTATTCCTAGCATATATATA-TATATTACTCGGAAGGAGAGGGAGGAGGAG--------AAACAAGTGATTGG---GAT-----------------CAGGGGCCACT-----GGCAGCCGCTGTT-------------CCGTGGCCAGGT---GAGGGTGTGTGG------------------------------------------------------------------------------CCCTTCTGTTTGGAAACG-----------------------------GCTTCC-CGAGCCTGGTGAGGTTC-TGGC--AGACTTGTGCAGATG i dasNov3.JH562710 C 0 C 0 e proCoq1.NW_012152163v1 773795 303 - 940639 I a score=303281.000000 s hg38.chr5_KI270795v1_alt 63652 24 + 131892 CCCTGCCCATGGCTCCTGGCTGTG s panTro5.chr5 5313858 24 - 181907262 CCCTGCCCATGGCTCCTGGCTGTG i panTro5.chr5 C 0 C 0 s panPan2.chr5 5576375 24 - 183735486 CCCTGCCCATGGCTTCTGGCTGTG i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1706336 24 + 3967317 CCCTGCCCATGGCTCCTGGCTGTG i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4582962 24 + 163208435 CCCTGCCCTTGGCTCCTGGCTGTG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5763986 24 - 180051392 CTCTGCCCGTGACTACTGGCTGTG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5950236 24 - 181584905 CTCTGCCCGTGACTACTGGCTGTG i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 980586 24 - 16193990 CTCTGCCCGTGACTACTGGCTGTG i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1801490 24 - 21434487 CCCTGCCCGTGACTACTGGCTATG i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4763900 24 - 82825804 CCCTGCCCATGACTACTGGCTGTG i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 269843 24 + 2521317 CCCTGCCCGTGACTACTGGCTGTG i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1751559 24 - 2415367 CCCTGCCCATGACTACTGGCTGTG i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64094265 24 + 204313951 TGCTGCCCATGGTTCCTGGCTGTG i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2220012 24 + 10068113 CGCTGCCCTTGGTTCCTGGCTGTG i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 75301 24 - 709587 CGCTGTCCATGGTTCCTGGCTGTG i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1175581 24 - 2246441 TGCTGCCCATGGTTCCTGGCTGTG i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 774098 24 - 940639 CCCTGCCCATGGCTCCTGGCTGTG i proCoq1.NW_012152163v1 I 303 I 112 s otoGar3.GL873522 1245147 23 + 48283576 CCCTGCCC-TGGCTCCTAGCCATG i otoGar3.GL873522 C 0 C 0 s mm10.chr13 65995980 23 - 120421639 CCCGACCCATGGAT-CTGGTTATG i mm10.chr13 C 0 C 0 s canFam3.chr4 37176976 14 + 88276631 ------ACGTG----CTGGCTGTG i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 264278 24 - 960158 CCCTGCCTCCGCTGCTCGGCTGTG i dasNov3.JH562710 C 0 C 0 a score=1284481.000000 s hg38.chr5_KI270795v1_alt 63676 101 + 131892 GTT--CTTCTTGGTCTGGGTCCCACATCTCAGGGCTACAGG--------CAGTGAGGCGCTGGAATCCCCCA-GGACTGTCCTGCTTCTTGCCAGCTCCCCTCCAGCCAGGC s panTro5.chr5 5313882 101 - 181907262 GTT--CTTCTTGGTCTGGGTCCCACATCTCAGGGCTACAGG--------CAGTGAGGCGCTGGAATCCCCCA-GGACTGTCCTGCTTCTTGCCAGCTCCCCTCCAGCCAGGC i panTro5.chr5 C 0 C 0 s panPan2.chr5 5576399 101 - 183735486 GTT--CTTCTAGGTCTGGGTCCCACATCTCAGGGCTACAGG--------CAGTGAGGCGCTGGAATCCCCCA-GGACTGTCCTGCTTCTTGCCAGCTCCCCTCCAGCCAGGC i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1706360 101 + 3967317 GTT--CTTCTAGGTCTGGGTCCCACATCTCAGGGCTACAGG--------CAGTGAGGCGCTGGAATCCCCCA-GGACTGTCCCGCTTCTTGCCAGCTCCTCTCCAGCCAGGC i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4582986 101 + 163208435 GTT--CTTCTAGGTCTGGGTCCTACATCTCAGGGCTACAGG--------CAGTGAGGCGCTGGAATCCCCTA-GGACTGTCCCCCTTCTTGCCAGCTCCCCTCCAGCCAGGC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5764010 100 - 180051392 ATT--CTGCTAGGTCCGGGTCCTACATCTCAGGGCTACAGG--------GAGTGAGGCGCTGGAATCCCCCA-GGACTG-CCCCCTTCTTGCCAGCTCCCCTCCAGCCAGGC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5950260 100 - 181584905 GTT--CTGCTAGGTCCGGGTCCTACATCTCAGGGCTACAGG--------GAGTGAGGCGCTGGAATCCCCCA-GGACTG-CCCCCTTCTTGCCAGCTCCCCTCCAGCCAGGC i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 980610 100 - 16193990 ATT--CTGCTAGGTCCGGGTCCTACATCTCAGGGCTACAGG--------GAGTGAGGCGCTGGAATCCCCCA-GGACTG-CCCCCTTCTTGCCAGCTCCCCTCCAGCCAGGC i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1801514 100 - 21434487 GTT--CTGCTAGGTCCGGGTCCTACATCTCAGGGCTACAGG--------GAGTGAGGCGCTGGAATCCCCCA-GGACTG-CCCCCTTCTTGCCAGCTCCCCTCCAGCTAGGC i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4763924 101 - 82825804 GTT--CTGCTAGGTCCGGGTCCTACATCTCAGGGCTACAGG--------GAGTGAGGCGCTGGAATCCCCCA-GGACTGTCCCCCTTCTTGCCAGCTCCCCTCCAGCCAGGC i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 269867 100 + 2521317 GTT--CTGCTAGGTCCGGGTCCTACATCTCAGGGCTACAGG--------GAGTGAGGCGCTGGAATCCCCCA-GGACTG-CCCCCTTCTTGCCAGCTCCCCTCCAGCTAGGC i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1751583 101 - 2415367 GTT--CTGCTAGGTCTGGGTCCTACATCTCAGGGCTACAGG--------GAGTGAGGCACTGGAATCCCCCA-GGACTGTCCCCCTTCTTGCCAGCTCCCCTCCAGCCAGAT i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64094289 98 + 204313951 GTTTTTTTCTAGGTTT-GTTCCTATGTCTCAGGGCTTCAGA--------CAGTGAGGCGCCGGAATCCCCCA-GGACTGTCCCCCTTCCTGCCAGTT----TCCAGCCAGGC i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2220036 103 + 10068113 GTTTTCTTCTAGGTCCGGGTCCTACGTCTCAGGGCTTCAGG--------CAGTGAGGCGCTGGAATCCCCCA-GGACTGTCCCCCTTCCTGCCAGCTCCCCTCCAGCCAGGC i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 75325 103 - 709587 GTTTTTTTCTAGGTCCGGGTTCTACTTCTCAGGGCTTCAGG--------CAGTGAGGCGCTGGAATCCCCCA-GGACTGTCGCCCTTCCTGCCAGCTCCCCTCCAGCCAGGC i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1175605 103 - 2246441 GTTTCTTTCTAGGTTCGGGTCCTACGTCTCACAGCTTCAGG--------CAGTGAGGCGCTGGAATCCGCCA-GGACTGTCCCCCTTCCTGCCAGCTCCCCTCCAGCCAGGC i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1245170 101 + 48283576 CTT--CACCTAGGTCTGGGTCCTACACTACAGAGCTCCCTG--------GAATGAGAGGCTGGAGTCCCCTA-GGACCGTCCCCTTTCCTGCCAGCTTCCCTCAGGTCAGAA i otoGar3.GL873522 C 0 C 0 s mm10.chr13 65996003 106 - 120421639 GTT--CTCCTGGGTTTGGATCTTGAACTGGGGGGCTGGAGGGGCCTAGACGGTGAGGCACTGG-GTCCCCCA-GGACTG-GCCCCTTCCTGCCAGCT-CTCTTGAGCCAGGC i mm10.chr13 C 0 C 0 s canFam3.chr4 37176990 101 + 88276631 GAC--CTTCCAGGTCTGGGTCCTGCACTGCAGGGCCCAAGG--------GAGTGGGGTGCTGGGGTCCCCCA-GGGCTGTCCCCCTTCCTGCCAGGTCCCTTTGGGCCCAGC i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 264302 101 - 960158 GTT--CTTCCAGGTCTGTCTCCTGTACCCCAGATCT-CAGA--------GAGTGAGGTACAAGAGTCCCCCAGGGGCTGGCCCCCTTCCTGCCAGCTCCCCTCAGGCCAGGT i dasNov3.JH562710 C 0 C 0 e proCoq1.NW_012152163v1 774122 112 - 940639 I a score=2719578.000000 s hg38.chr5_KI270795v1_alt 63777 176 + 131892 CTGCCTGGCGGATGCCCAAACACTCATCAGGCAAGACAGGTCTGTAGGCAAATATTGATCCCTGTGCGGCTGCGGGCGGTGAGGGGGCAGCAGGTGTGGCACAGAGTCCTGTTTACCTGCCGCTGAGCCTGGCGGGC-GCTGCCTATTTGCTGAGCTCCCTTCCCGGCCTGGCTC---AG------------------------------------------ s panTro5.chr5 5313983 176 - 181907262 CTGCCTGGCCGATGCCCAAACACTCATCAGGCAAGACAGGTCTGTAGGCAAATATTGATCCCTGTGCGGCTGCGGGCGGTGAGGGTGCAGCAGGTGTGGCACAGAGTCCTGTTTACCTGCCGCTGAGCCTGGCGGGC-GCTGCCTATTTGCTGAGCTCCCTTCCCGGTCTGGCTC---AG------------------------------------------ i panTro5.chr5 C 0 C 0 s panPan2.chr5 5576500 176 - 183735486 CTGCCTGGCGGATGCCCAAACACTCATCAGGCAAGACAGGTCTGTAGGCAAATATTGATCCCTGTGCGGCTGCCGGCGGTGAGGGGGCAGCAGGTGTGGCACAGAGTCCTGTTTACCTGCCGCCGAGCCTGGCGGGC-GCTGCCTATTTGCTGAGCTCCCTTCCCGGTCTGGCTC---AG------------------------------------------ i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1706461 176 + 3967317 CTGCCTGGCGGATGCCCAAACACTCATCAGGCAAGACAGGTCTGTAGGCAAATATTGATCCCTGTGCGGCTGCGGGCGGTGAGGGGGCAGCAGGTGTGGAACAGAGTCCTGTTTACCTGCCGCTGAGCCTGGCGGGC-GCTGCCTATTTGCTGAGCTCCCTTCCCGGCCTGGCTC---AG------------------------------------------ i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4583087 176 + 163208435 CTGCCTGGCGGATGCCCAAACACTCATTAGGCAAGACAGGTCTGTAGGCAAATATTTATCCCTGTGCAGCTGCGGGCTGTGAGGAGGCAGCAGGTGTGGAACAGAGTCCTGTTTACCTGCCGCTGAGCCTGGCGGGC-GCTGCGTATTTGCTGAGCTGCCTTTCCGGCCTGGCTC---AG------------------------------------------ i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5764110 176 - 180051392 CTGCCTGGCAGATGCCCAAACACTCATTAGGCAAGACAGGTCTGTAGGCAGATATTTATCCCTGTGCAGCTGTGGGCTGTGAGGAGGCAGCAGGTGCGGGGCAGAGTCCTGTTTACCTAGCGCTGAGCCTGGTAGGC-GCTGCCTATTTGCTGAGCTCCCTTCCCGGCCTGGCTC---AG------------------------------------------ i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5950360 176 - 181584905 CTGCCTGGCAGATGCCCAAACACTCATTAGGCAAGACAGGTCTGTAGGCAGATATTTATCCCTGTGCAGCTGTGGGCTGTGAGGAGGCAGCAGGTGCGGGGCAGAGTCCTGTTTACCTAGCGCTGAGCCTGGTAGGC-GCTGCCTATTTGCTGAGCTCCCTTCCCGGCCTGGCTC---AG------------------------------------------ i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 980710 176 - 16193990 CTGCCTGGCAGATGCCCAAACACTCATTAGGCAAGACAGGTCTGTAGGCAGATATTTATCCCTGTGCAGCTGTGGGCTGTGAGGAGGCAGCAGGTGCGGGGCAGAGTCCTGTTTACCTAGCGCTGAGCCTGGTAGGC-GCTGCCTATTTGCTGAGCTCCCTTCCCGGCCTGGCTC---AG------------------------------------------ i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1801614 176 - 21434487 CTGCCTGGCAGATGCCCAAACACTCATTAGGCAAGACAGGTCTGTAGGCAGATATTTATCCCTGTGCAGCTGTGGGCTGTGAGGAGGCAGCAGGTGCGGGGCAGAGTCCTGTTTACCTAGCGCTGAGCCTGGTAGGC-GCTGCCTATTTGCTGAGCTCCCTTCCCGGCCTGGCTC---AG------------------------------------------ i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4764025 176 - 82825804 CTGCCTGGCGGATGCCCAAACACTCATTAGGCAAGACAGGTCTGTAGGCAGATATTTATCCCTGTGCAGCTGTGGGCTGTGAGGAGGCAGCAGGTGCGGGGCAGAGTCCTGTTTACCTAGCGCTGAGCCTGGCAGGC-GCTGCCTATTTGCTGAGCTCCCTTCCCAGCCTGGCTC---AG------------------------------------------ i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 269967 176 + 2521317 CTGCCTGGCAGATGCCCAAACACTCATTAGGCAAGACAGGTCTGTAGGCAGATATTTATCCCTGTGCAGCTGTGGGCTGTGAGGAGGCAGCAGGTGCGGGGCAGAGTCCTGTTTACCTAGCGCTGAGCCTGGTAGGC-GCTGCCTATTTGCTGAGCTCCCTTCCCGGCCTGGCTC---AG------------------------------------------ i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1751684 176 - 2415367 CTGCCTGGCGGATGCCCAAACACTCATTAGGCAAGACAGGTCTGTAGGCAGATATTTATCCCTGTGCAGCTGTGGGCTGTGAGGAGGCAGCAGGTGCGGGGCAGAGTCCTGTTTACCTAGCGCTGAGCCTGGCAGGC-GCTGCCTATTTGCTGAGCTCCCTTCCCGGCCTGGCTC---AG------------------------------------------ i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64094387 178 + 204313951 CTGCCTGGCAGATGCCCAAACACTCATTAGGTTAGACAGGTCTATAGGCAAATATTTATCCCTT-GCAGCTGCAGGCTGTGAGGAGGCAGCAGGTGCGGGGCAGAGTCCTGTTTACCTAGCGCTGAGCCAGGCGGGC-GCTGCCTGTTTGCTGAGCTCCCTACCTGGCCTGGCTCAGAAG------------------------------------------ i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2220139 178 + 10068113 CTGCCTGGCAGACGCCCAAACACTCATTAGGTTAGACAGGTCCGTAGGCAAATATTTATCCCTG-GCAGCTGCAGGCTGTGGGGAGGCAGCAGGTGCAGGGCAGAGTCCTGTTTACCTAGCACTGAGCCAGGCGGGC-ACTGCCTGTTTGCTGAGCTTCCTTCCCGGCCTGGCGCAGAAG------------------------------------------ i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 75428 178 - 709587 CTGCCTGGCAGACGCCCAAACACTCATTGGGTTAGACAGGTCTGTAGGCAAATATTTATCCCTG-GCAGCTGCGGGCTGTGAGGAGGCAGCAGGTGCGGGGCAGAGTCCTGTTTACCTAGCGCTGAGCCAGGCGGGC-GCTGCCTGTTTGCTGAGCTCCCTTCCCAGCCTGGCGCAGAAG------------------------------------------ i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1175708 178 - 2246441 CTGCCTGGCAGACGCCCAAACACTCATTAGGTTAGACAGGTCTGTAGGCAAATATTTATCCCTT-GCAGCTGCGGGCTGTGAGGAGGCAGCAGGTGCGGGGCAGAGTCCTGTTTACCTAGTGCTGAGCCAGGCGGGT-GCTGCCTGTTTGCTGAGCTCCCTTCCTGGCCTGGCTCAGAAG------------------------------------------ i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 774234 173 - 940639 CTGCCTGGCGGACGCCAAAACCCTCATTAGGCGAGACGGGTCTGTAGGCAAATATTTACCCCTGCGCAGCTGTGGGCTC--TGCAGGCCGCAGGTGCGGG-CAGAGTCCTGTTTACCCAGCGCGGAGCCTGACGGGC-GCCGCCTGTTTGCTGAGCTCCCTTCCTGGCCTCGCTC---AG------------------------------------------ i proCoq1.NW_012152163v1 I 112 I 669 s otoGar3.GL873522 1245271 176 + 48283576 CTCCCTGGCAGATGCCCAAACACTAATTAGGCAAGATGGGTCTGTAGGCAAATATTTATCCCTGTGCAGCTGTGGGCTATGTGCAGGCTGCAGATGTGGGACTGAGTCCTGTTTACCTAGCGCCGAGCCTGGCAGGT-GCTGCCTGTTTGCTGAGCTCCCTTCCTGGCCTGGCTC---AG------------------------------------------ i otoGar3.GL873522 C 0 I 104 s mm10.chr13 65996109 166 - 120421639 CTGCCTGGCAGCTACTCAAACACTCATTAGGCAAGACAGATCTGTAGGCAAATATTTATCCCTGTGCAGCTGTGGGCTG-----------CAGGTGCAGGGCAGAGTCCTGTTTACTTAGTGTGCAGCCAAGCAGGCTGCTGCCTGTTTGCTAAGTGCCCTCTCTGGCTCTGCTT---AG------------------------------------------ i mm10.chr13 C 0 I 1018 s canFam3.chr4 37177091 176 + 88276631 CTGCCTAGCGGATGCCCAAACAGTCATTAGGCGAGATGGGGCTGTTGGCAAATATTTATCCCTGTGCAGCTGTGGGCTGAGTGGAGGCCGCAGGTGCTGGGCAGAGTCCTGTTTACCCAGCAGTGAGCCAAGCAGGC-ACTGCCTGTTTGCTGAGCTCTATTCCTGGCCTGACTC---AG------------------------------------------ i canFam3.chr4 C 0 I 14 s dasNov3.JH562710 264403 214 - 960158 CTGCCTGGCGGTTGCCCAAACTCTCATTAGAGGAGACGAGTCTGTCTGCAAATATTTATCCCTGCGCAGCTGCGGGCTGAGTGGAGGCCACGGGTGTGGG-CTGCGT--TGTTTACCCAGTGCTGAGCAGGGC-TGT-GCGGCCTGTTTGCCAAGTTTCCTTCCTGCCCTGGCTT---GGATGCCCAGGAGGAAGCTGGGGGCAGGGGGCGTGGTATGCCAG i dasNov3.JH562710 C 0 C 0 a score=3570540.000000 s hg38.chr5_KI270795v1_alt 63953 335 + 131892 GTGAGG--------------------------------------------------------------------------------CGAGCTCTGC------------------------------------------------CCTCTGTctccc----tccct------------------cct---ccc-------tctgctgtgctgt---t------------caagggggc-tagtcatt-c--ttcccacctctttgctgggctgactgctgctcgttcttgtgtctcagcttccacactccctcttcagggcctccctgtctacc-ctc-actccagagtggccg----------------ttgccgcgg--cccacagttc------cccacc------------------------------t-accaggttagtgttgctgttctctgctagatgccagatgagcagagacggggacagttttgctcaccactatttc--tccagcccctccgttagggcctggcactcgggaggtgctcctcaagtatttg---AGTGTCAGCC s panTro5.chr5 5314159 335 - 181907262 GTGAGG--------------------------------------------------------------------------------CGAGCTCTGC------------------------------------------------CCTCTTTctccc----tccct------------------cct---ccc-------tctgctgtgctgt---t------------caagggggc-tagtcatt-c--ttcccacctctttcctgggctgactgctgctcattcttgtgtctcagcttccacactccctcttcagggcctccctgtctacc-ctc-actccagagtggccg----------------ttgccgcgg--cccacagttc------cccacc------------------------------t-accaggttagtgttgctcttctctgctagatgccagatgagcagagacagggacagttttgctcaccactatttc--tccagcccctcccttagggcctggcactcgggaggtgctcctcaagtatttg---AGTGTCAGCC i panTro5.chr5 C 0 C 0 s panPan2.chr5 5576676 335 - 183735486 GTAAGG--------------------------------------------------------------------------------CGAGCTCTGC------------------------------------------------TCTCTTTctccc----tccct------------------cct---ccc-------tctgctgtgctgt---t------------caagggggc-tagtcatt-c--ttcccacctctttcctgggctgactgctgctcattcttgtgtctcagcttccacactccctcttcagggcctccctgtctacc-ctc-actccagagtggccg----------------ttgccacgg--cccacagttc------cccacc------------------------------t-accaggttagtgttgctcttctctgctagatgccagatgagcagagacagggacagttttgctcaccactatttc--tccagcccctcccttagggcctggcactcgggaggtgctcctcaagtatttg---AGCGTCAGCC i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1706637 334 + 3967317 GTGAGG--------------------------------------------------------------------------------CGAGCTCTGC------------------------------------------------CCTCTTTctccc----tccct------------------cct---ccc-------tctgctgtgctgt---t------------caagggggc-tagtcatt-c--ttcccacctctttcctgggctgactgctgctcattcttgtgtctcagcttccacactccctcttcagggcctccctgtctacc-ctc-actccagagtggccg----------------ttgccgcgg--cccacagtt-------cccacc------------------------------t-accaggttagtgttgctcttctctgctagatgccagatgagcagagacagggacagttttgctcaccactatttc--tccagcccctccgttagggcctggcactcgggaagtgctcctcaagtatttg---AGTGTCAGCC i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4583263 335 + 163208435 GTTAGG--------------------------------------------------------------------------------CGAGCTCTGC------------------------------------------------CCTCTTTctccc----tccct------------------cct---gcc-------tctgctgtgctgt---t------------caagggggc-tagtcatt-c--ttcccacctctttcctgggctgactgctgctcattcttgtgtctcagcttcaacactccctcttcagggcctccctgactacc-ctc-actccagagtggccg----------------ttgccgcgg--cccacagttc------cccacc------------------------------t-accaggttagtgttgctcttctctgctagatgccagacgagcagagatggggacagttttgctcaccactatttc--tccagcccctcccttagggcctggcactcgggaggtgctcctcaagtatttg---AGTGTCCGCC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5764286 360 - 180051392 GTTGGG--------------------------------------------------------------------------------CAAGCTCTGC------------------------------------------------CCTCTTCctccc----tccct------------------cct---ccc-------tgtgctgtgctgt---t------------caagggggc-tagtcatt-c--ttcccacctctttcctgagctgactgctgctcattcttctgtctcagcttcaacactccctcttcagggcctccctgactacc-ctc-actccagagtggctg----------------ttgccacgg--cccacagttc------cccatcgcggtcatta----cttatttc-ccacagtt-accaggttagtgttggtcttctctgctagatgccagatgagcagagactgggacagttgcactcacccctatttc--cccagcccctcccatagggcctggcactcaggtagtgctcCTCAGGCATTTG---AGTGTCAGCC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5950536 360 - 181584905 GTTGGG--------------------------------------------------------------------------------CAAGCTCTGC------------------------------------------------CCTCTTCctccc----tccct------------------cct---ccc-------tgtgctgtgctgt---t------------caagggggc-tagtcatt-c--ttccctcctctttcctgagctgactgctgctcattcttctgtctcagcttcaacactccctcttcagggcctccctgactacc-ctc-actccagagtggctg----------------ttgccacgg--cccacagttc------cccatcgcggtcatta----cttatttc-ccacagtt-accaggttagtgttggtcttctctgctagatgccagatgagcagagactgggacagttgcactcacccctatttc--cccagcccctcccatagggcctggcactcaggtagtgctcCTCAGGCATTTG---AGTGTCAGCC i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 980886 360 - 16193990 GTTGGG--------------------------------------------------------------------------------CAAGCTCTGC------------------------------------------------CCTCTTCctccc----tccct------------------cct---ccc-------tgtgctgtgctgt---t------------caagggggc-tagtcatt-c--ttcccacctctttcctgagctgactgctgctcattcttctgtctcagcttcaacactccctcttcagggcctccctgactacc-ctc-actccagagtggctg----------------ttgccacgg--cccacagttc------cccatcgcggtcatta----cttatttc-ccacagtt-accaggttagtgttggtcttctctgctagatgccagatgagcagagactgggacagttgcgctcaccactatttc--cccagcccctcccataaggcctggcactcaggtagtgctcCTCAGGCATTTG---AGTGTCAGCC i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1801790 360 - 21434487 GTTGGG--------------------------------------------------------------------------------CAAGCTCTGC------------------------------------------------CCTCTTCctccc----tccct------------------cct---ccc-------tgtgctgtgctgt---t------------caagggggc-tagtcgtt-c--ttcccacctctttcctgagctgactgctgctcattcttctgtctcagcttcaacactccctcttcagggcctccctgactacc-ctc-actccagagtggctg----------------ttgccacgg--cccacagttc------cccatcgcggtcatta----cttatttc-ccacagtt-accaggttagtgttggtcttctctgctagatgccagatgagcagagactgggacagtttcgctcaccactatttc--cccagccccgcctatagggcctggcactcaggtggtgctcCTCAGGCATTTG---AGTGTCAGCC i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4764201 360 - 82825804 GTTGGG--------------------------------------------------------------------------------CAAGCTCTGC------------------------------------------------CCTCTTCctccc----tccct------------------cct---ccc-------tgtgctgtgctgt---t------------caagggggc-tagtcgtt-c--ttcccacttcttccctgagctgactgctgctcattcttctgtctcagcttcaacactccctcttcagggcctccctgactacc-cgc-actccagagtggctg----------------ttgccgcgg--cccacaattc------cccgtcgtggtcatta----cttatttc-ccacagtt-accaggttagtgttggtcttctctgctagatgccagatgagcagagactgggacagtttcgctcaccactatttc--cccagcccctcccatagggcctggcactcaggtggtgctcCTCAGGCATTTG---AGTGTCAGCC i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 270143 360 + 2521317 GTTGGG--------------------------------------------------------------------------------CAAGCTCTGC------------------------------------------------CCTCTTCctccc----tccct------------------cct---ccc-------tgtgctgtgctgt---t------------caagggggc-tagtcgtt-c--ttcctacctctttcctgagctgactgctgctcattcatctgtctcagcttcaacactccctcttcagggcctccctgactacc-ctc-actccagagtggctg----------------ttggcacgg--cccacagttc------cccatcgcggtcatta----cttatttc-ccacagtt-accaggttagtgttggtcttctctgctagatgccagatgagcagagactgggacagtttcgctcaccactatttc--cccagcccctcccatagagcctggcactcaggtggtgctcCTCAGGCATTTG---AGTGTCAGCC i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1751860 360 - 2415367 GTTGGG--------------------------------------------------------------------------------CAAGCTCTAC------------------------------------------------CCTCTTCctccc----tccct------------------cct---ccc-------tgtgctgtgctgt---t------------caggggggc-tagtcgtt-c--ttcccacctctttcctgagctgactgctgctcattcttctgtctcagcttcaacactccctcttcagggcctccctgactacc-ctc-actccagagtagctg----------------ttgccgcgg--cccacagttc------cccatcgtggtcatta----cttatttc-ccacagtt-accaggttagtgttggtcttctctgctagatgccagatgagcagagactgggacagttttgctcaccactatttc--cccagcccctcccatagggcctggcactcaggtggtgctcCTCAGGCATTTG---AGTATCAGCC i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64094565 374 + 204313951 GTTGGG--------------------------------------------------------------------------------CGAGCTCTGC------------------------------------------------CCTCTTCCTCACTCCGtccct------------------cct---ccc-------tccgctgtgctgt---t------------ccagagcac-ta---gtt-c--ttcccacctctttcctgggctgactgctgctaattc-catgtctcagcttcaatgctccctcctcaggg-ctccctgatgacc-ctc-actccagagcagtcaggcaccctgtgag-cattgccgcgg--cccacagttc------cccatcatgataatta----cttatttc-ctgcactt-accaggttagtgtttgtcttctgtgctagaagccagatgagcagagatggggatagttttgctcaccactgtttc--cccagcccctcccatagggcctggcactcaggaggtgctccccaagtatttg---AGTGTCAGCC i calJac3.chr2 C 0 I 624 s saiBol1.JH378186 2220317 377 + 10068113 GTTGGG--------------------------------------------------------------------------------CGAGCTTTGC------------------------------------------------CCTCTTCCTCCCTCCGTCCCT------------------CCT---CCC-------TCCGCTGTGCTGT---G------------CCAGGGGGC-TAGTTGTT-C--ttcccacctctttcctgggctgactgatgctcactc-tgtgtctcagcttcaatgctccctcctcaggg-ctccctgattacc-ctc-actctggagcggtcaggcaccctgtgag-cattgccgtgg--cccacagttc------cccatcatggtgatta----cttatttc-ctgcactt-accaggttagtgtttgtcttctgtgctagaagccagatgagcagagatggggatagttttgctcactactgtttc--cccagcccctcccatagggcctggcactcgagaggtgctcCCCGGGTATTTG---AGTGTCAGCC i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 75606 377 - 709587 GCTGGG--------------------------------------------------------------------------------CGAGCTCTGC------------------------------------------------CCTCTTCCTCCctccgtccct------------------cct---ccc-------tctgctgtgctgt---t------------ccaggggcc-tagttgtt-c--ttcccacctctttcctgggctgactgctgctcattc-tgtgtatcagcttcagtgctccctcctcaggg-ctccctgattacc-ctc-actccagagcggtcgggcaccctgtgag-cattgccgcag--cccacagttc------cccatcatggtaatta----cttatttc-ctgcactt-accaggttagtgtttgtcttctgtgctagaagccaggtgagcagagatggggatagctttgctcagcactgtttc--cccagcccctcccatagggcctggcactcgggagctgctccccaagtatttg---AGTGTCAGCC i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1175886 378 - 2246441 GTTGGG--------------------------------------------------------------------------------CGAGCTCTGC------------------------------------------------CCTCTTCCTCCctccttccct------------------cct---ccc-------ttcactgtgctgt---t------------ccagggggc-tagttgtt-c--ttcccacctctttcctgggctgactgctgctcattc-tgtgtctcagcttcaatgctccctcatcaggg-ctccctgattacc-ctc-actccagagcagtcaggcacccagtgag-cattgccacgg--cccacagttc------cccatcatggtaatta----cttatttc-ctgcacttaaccaggttagtgtttgtcttctgtgctagaagccagatgagcagagatggggttagttttgctcaccactgtttc--cccagcccctcccacagggcctggcactcgggaggtgctccccaagtatttg---AGTGTCAGCC i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1245551 390 + 48283576 GTGAGG--------------------------------------------------------------------TCCC-------ATAAGCTCCCT------------------------------------------------CCTCTtcctctc----atcct------------------cttgcaccc-------ttccctatgctgtgtgc------------caagggtgtgtaat--tc-c--tccccacctctttcctaggctgactcctgttcattcttaggccttggcttcaaggccccctcttcaggacctcccagaccacc-ccctactccagagtggttgggcaccccgtcagccactgccagggcccccacagtac------cct-tcgtggtaattc----cttatttctcttcactt-agcaggttagtgtttgtcttctctgttagatgca----gagcagagatggggccagttttgttcaccactgtttctgccttgcccctcctgtagggcctggtgcccagtaggtactcaccaaatatttgcgaagtgTCAGCC i otoGar3.GL873522 I 104 C 0 s canFam3.chr4 37177281 464 + 88276631 GCTGGGGCAG---------CAGAGAATGTGGTAGATAGGGGAGT--------------------TGAGAGTGCCTCCT-TGGCGGTCAAACCCTGCACAGGCCTCAGTATAAAGTCCTAGCTGGGGCCCCAGGGTCCTGTGAGACCTGCCTCTTCC----TCTCT------------------CCT---CTTGCAGATGTCCCATGTGCTGC---TCCCTGGGAGTGGCAGGAGGGT-GGGTCTTT-cttttcccatctctgccctgggttgactcctggtcattc-------tcagat---------------------ctccctgaccacctccc-actccagagtgggtaggtgccctgttagctttagccatgg-ccccacagctcatggaaaccacc--------ta----ctcacttc-ccctactt-cgctggttactgtttgtgttctctgctagatgctggaagtgcagaaacagagatgattttgttccccatggtttc---ccagcacctcc-atagtgcccagcacctggtaggtgctcaccgagtattta---agtgt-ggct i canFam3.chr4 I 14 C 0 s dasNov3.JH562710 264617 448 - 960158 GTGGGAGCTGCCTCCCTGTCAGCCAACCCTGCCCCCAAAGGTCTCCAAATACTGTCCAGACCCCTGACACTGCCCACAAAGGCCTACGAGCTCAGC------------------------------------------------ccttgctttccccgcagctctggctctgatgcacagcagcct---tcc-------tct-ctgctcttc---g------------ctgggggct-gggtcgctgt--ttcccacctcttccct-agctgattcctgctcattcttgggtctgagctttactgc--------------ctccctgcccaccgcct-actccacagtggttaggcaccctgttggttgttgccatgg--acccaacctg------gc--tcgtggcaattatttccttatttattcacgctt-acctggttaatgtttatctttcctaccagactccggaagggcagggacctgggtggtttggtttaccactgtttt---------cctcacatagggcctgacacatagtaggtgctcaccaaaagct--------------- i dasNov3.JH562710 C 0 C 0 e mm10.chr13 65996275 1018 - 120421639 I e proCoq1.NW_012152163v1 774407 669 - 940639 I a score=1726957.000000 s hg38.chr5_KI270795v1_alt 64288 164 + 131892 TGAATGAAGGC---------AGGCAGAGAGCCCTGCATGGACAAAGGCACAGAGGTGTGACAGAGGGTAGTGAGGGGAGGGGGGCGGTGACGATGTGTGGTGGGGAGCGGCAGGACAGGAGGCTGGAAAGTGAGGTGGGGTACTGAGCACCTCCCTGTCCTC----CCCTTACTCTG s panTro5.chr5 5314494 164 - 181907262 TGAATGAAGGC---------AGGCAGAGAGCCCTGCATGGGCAAAGGCACAGAGGTGTGACAGAGGGTAGTGAGGGGAGGGGGGCGGTGACGATGTATGGTGGGGAGCGGCAGGACAGGAGGCTGGAAAGTGAGGTGGGGTACTGAGCACCTCCCTGTCCTC----CCCTTACTCTG i panTro5.chr5 C 0 C 0 s panPan2.chr5 5577011 164 - 183735486 TGAATGAAGGC---------AGGCAGAGAGCCCTGCATGGGCAAAGGCACAGAGGTGTGACAGAGGGTAGTGAGGGGAGGGGGGCGGTGACGATGTATGGTGGGGAGCGGCAGGACAGGAGGCTGGAAAGTGAGGTGGGGTACTGAGCACCTCCCTGTCCTC----CCCTTACTCTG i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1706971 163 + 3967317 TGAATGAAGGC---------AGGCAGAGAGCCCTGCATGGGCAAAGGCACAGAGGTGTGACAGAGGGTAGTGAGGGGA-GGGGGCGGTGACGATGTATGGTGGGGAGCGGCAGGACAGGAGGCTGGAAAGTGAGGTGGGGTACTGAGCACCTCCCTGTCCTC----CCCTTACTCTG i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4583598 162 + 163208435 TGAATGAAGGC---------AGGCAGAGAGCCCTGCGTGGGCAAAGGCACAGAGGTGTGAC--AGGGTAGTGAGGCGAGGGGGGCCGTGACGATGTATGGTGGGAAGCGGCAGGACTGGAGGCTGGAAAGTGAGGTGGGGTACTGAGCACCTCCCTGTCCTC----CCCTTACTCTG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5764646 164 - 180051392 TGAATGAAGGC---------AGGCAGAGAGCCCTGCATGGGCAAAGGCACAGATGTGTGACGGAGGGTGGCGAGGAGAGGGGGGCGGTGACGATGTATGGTGGGGAGTGGCAGGACTGGAGGCTGGAGAGCGAGGTGGGGTATTGAGCACCTCCTCGTCCTC----TCCTTACTCTG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5950896 164 - 181584905 TGAATAAAGGC---------AGGCAGAGAGCCCTGCATGGGCAAAGGCACAGATGTGTGACGGAGGGTGGCGAGGAGAGGGGGGCGGTGACGATGTATGGTGGGGAGTGGCAGGATTGGAGGCTGGAGAGCGAGGTGGGGTATTGAGCACCTCCTCGTCCTC----TCCTTACTCTG i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 981246 164 - 16193990 TGAATGAAGGC---------AGGCAGAGAGCCCTGCATGGGCAAAGGCACAGATGTGTGACGGAGGGTGGCGAGGAGAGGGGGGCGGTGACGATGTATGGTGGGGAGTGGCAGGACTGGAGGCTGGAGAGCGAGGTGGGGTATTGAGCACCTCCTCGTCCTC----TCCTTACTCTG i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1802150 164 - 21434487 TGAATGAAGGC---------AGGCAGAGAGCCCTGCATGGGCAAAGGCACAGATGTGTGACGGAGGGTGGCGAGGAGAGGGGGGCGGTGACGATGTATGGTGGGGAGTGGCAGGACTGGAGGCTGGAGAGCGAGGTGGGGTATTGAGCACCTCCTCGTCCTC----TCCTTACTCTG i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4764561 164 - 82825804 TGAATGAAGGC---------AGGCAGAGAGCCCTGCATGGGCAAAGGCACAGATGTGTGAtggagggtggcgaggggaggggggcagtgacgatgtatggtggggagtggcaggactggaggctggagAGCTAGGTGGGGTATTGAGCACCTCCTCGTCCTC----TCCTTACTCTG i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 270503 164 + 2521317 TGAATGAAGGC---------AGGCAGAGAGCCCTGCATGGGCAAAGGCACAGATGTGTGACGGAGGGTGGCGAGGAGAGGGGGGCGGTGACGATGTATGGTAGGGAGTGGCAGGACTGGAGGCTGGAGAGCGAGGTGGGGTATTGAGCACCTCCTCGTCCTC----TCCTTACTCTG i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1752220 164 - 2415367 TGAATGAAGGC---------AGGCAGGGAGCCCTGCATGGGCAAAGGCACAGAGGTGTGACAGAGGGTGGTGAGGGGAGGGGGGCGGTGACGATGTATGGTGGGGAGTGGCAGGACTGGAGGCTGGAAAGCGAGGTGGGGTATTGAACACCTCCCTGTCCTC----TCCTTACTCTG i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64095563 164 + 204313951 TGAGTGAAGGC---------AGGCAGAGAGCCCTGCATGGGCAAAGGCACAGAGGTGTGATGGAGGGTGGTGGGGGAGGGGAAGGGGTGACGCTGTATGGTGGGGAGTTGGGGGATTGGAGGCTGGAAAGTAAAGTGGGGTACTGAGCACCTCCCTGTCCTT----CCCTTACTCTG i calJac3.chr2 I 624 C 0 s saiBol1.JH378186 2220694 163 + 10068113 TGAGTGAAGGC---------AGGCAGAGAGCCCTGCACGGGCAAAGGCACAGAGGTGTGATGGAGGGTGGTGAGGGAGGGGCAGGGGTGACGCTGTATGGTGGGGAGTTGGGGGAATGGAGGCTGGAAAGTGAAGTGGGGTACCGAGCATCTCCCTGTCC-T----CCCTTACTCTG i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 75983 164 - 709587 TGAGTGAAGGC---------AGGCAGAGAGCCCTGCACGGGCAAAGGCACAGACGTGTGATGGAGGGTGGTGAGAGAGGGGCAGGGGGGATGCTGTATGGTGGGGAGTTGGTGGACTGGAGGCTGGAAAGTAAAGTGAGGTACTGAGCACCTCCCTGTCCTC----CCCTTACTCTG i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1176264 164 - 2246441 TGAGTGAAGGC---------AGGCAGACAGCCCTGCACGGGCAAAGGCATAGAGGTGCGATAGAGGGTGGTGAGGGAGGGGCAGGGGTGACGCTGTATGGTAGGGAGTTGGGGGATTGGAGCCTGGAAAGTAAAGTGGGGTACCGCACACCTCCCTGTCCTC----CCCTTACTCTG i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1245941 136 + 48283576 TGCGTGA-------------AGCCAGAGGCAACTGCATGGGCAAAAGCACAGAGGTGAGATGGAGGCCAG------GAGGAGGGTG-------TGTATGGC-GGCAGTGGCGAGGCTGGAGGCTGGAAAGTTAGGTGAAG--------------CTGTCCCCTCAACCCTTAATCTG i otoGar3.GL873522 C 0 C 0 s canFam3.chr4 37177745 118 + 88276631 tgagtgaaGACTGAGGAGCGGGGAGGGGAGCTCTGTG-------------ATgtgtgtgatgcagggtta---------------------gaggtggggcagggagccaagagattggaagctggaaaattatgtaggg---------------------g----ctgggactctg i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 265065 142 - 960158 tgagtgaaGCC---------AGACAGAGGGAACTG--TGAGCAAAGGCAGAAAGGCATGGT---GGGTTGGGAGGAGGGTGAGA----------ATGTGGGGGAGAGTGG-GAGACCCGAGGCTGGAAAGTAATGTGAGC------ACCCCACCCTCACTGC----CCCCCACTCCG i dasNov3.JH562710 C 0 C 0 e mm10.chr13 65996275 1018 - 120421639 I e proCoq1.NW_012152163v1 774407 669 - 940639 I a score=532724.000000 s hg38.chr5_KI270795v1_alt 64452 40 + 131892 AAAGCCTTTGAATGCCACATCTGGGAGTTCAGATTTTATC s panTro5.chr5 5314658 40 - 181907262 AAAGCCTTTGAATGCCACATCTGGGAGTTCAGATTTTATC i panTro5.chr5 C 0 C 0 s panPan2.chr5 5577175 40 - 183735486 AAAGCCTCTGAATGCCACATCTGGGAGTTCAGATTTTATC i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1707134 40 + 3967317 AAAGCCTTTGAATGCCATATCTGGGAGTTCAGATTTTATC i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4583760 40 + 163208435 AAAGCCTTTGAATGCCACATCTGGGAGTTCAGGTTTTATC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5764810 40 - 180051392 AAAGCCTTTGAATGCCACATCTGGGAGTTCAGGTTTTATC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5951060 40 - 181584905 AAAGCCTTTGAATGCCACATCTGGGAGTTCAGGTTTTATC i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 981410 40 - 16193990 AAAGCCTTTGAATGCCACATCTGGGAGTTCAGGTTTTATC i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1802314 40 - 21434487 AAAGCCTTTGAATGCCACATCTGGGAGTTCAGGTTTTATC i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4764725 40 - 82825804 AAAGACTTTGAATGCCACATCTGGGAGTTCAGGTTTTATC i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 270667 40 + 2521317 AAAGCCTTTGAATGCCACATCTGGGAGTTCAGGTTTTATC i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1752384 40 - 2415367 AAAGCCTTTGAATTCCACATCTGGGAGTTCAGGTTTTATC i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64095727 40 + 204313951 AAAGTCTTTGAATGCCACATCTGGGAGTTCAGGTTTTATC i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2220857 40 + 10068113 AAAGCCTTTCAATGCCACATCTGGGAGTTCAGGTTTTATC i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 76147 40 - 709587 AAAGCCTTTGAATGCCACATCTGGGAGTTCAGGTTTTATC i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1176428 40 - 2246441 AAAGTCTTTGAATGCCACATCTGGGAGTTCAGGTTTTATC i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1246077 36 + 48283576 AAAGACCCTGAAT-CCAGGGCTGGGAGTTTGG--TCAAT- i otoGar3.GL873522 C 0 C 0 s mm10.chr13 65997293 39 - 120421639 AAAGGCTTTGAATACTACACCAGTGAGGT-GGGTTTTCTC i mm10.chr13 I 1018 C 0 s canFam3.chr4 37177863 39 + 88276631 aaaggtcttgaatgccatgccaaggagttt-ggttttatc i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 265207 40 - 960158 AAAGGCCTTGAATATCACACCAAGGAGTCTGGATGTTATC i dasNov3.JH562710 C 0 C 0 e proCoq1.NW_012152163v1 774407 669 - 940639 I a score=342949.000000 s hg38.chr5_KI270795v1_alt 64492 24 + 131892 TGGTCAGAAATGGGAAA-----------T--TGTTGG--- s panTro5.chr5 5314698 24 - 181907262 TGGTCAGAAATGGGAAA-----------T--TGTTGG--- i panTro5.chr5 C 0 C 0 s panPan2.chr5 5577215 24 - 183735486 TGGTCAGAAATGGGAAA-----------T--TGTTGG--- i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1707174 24 + 3967317 TGGTCAGAAATGGGAAA-----------T--TGTTGG--- i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4583800 24 + 163208435 TGGTCAGAAATGGGAAA-----------T--TATTGG--- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5764850 24 - 180051392 TAGTCAGAAATAGGAAA-----------C--TGTTGG--- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5951100 24 - 181584905 TAGTCAGAAATAGGAAA-----------C--TGTTGG--- i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 981450 24 - 16193990 TAGTCAGAAATGGGAAA-----------C--TGTTGG--- i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1802354 24 - 21434487 TAGTCAGAAATGGGAAA-----------C--TGTTGG--- i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4764765 24 - 82825804 TAGTCAGAAATGGGAAA-----------C--TGTTGG--- i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 270707 24 + 2521317 TAGTCAGAAATGGGAAA-----------C--TGTTGG--- i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1752424 24 - 2415367 TGGTCAGAAATGGGAAA-----------C--TGTTGG--- i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64095767 24 + 204313951 TGGTCAGAAATGGGAAA-----------T--TGTTGG--- i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2220897 35 + 10068113 TGGTCAGAAATGGGACATTGTTGGGAATT--TGTTGG--- i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 76187 24 - 709587 TGGTCAGAAATGGGAAA-----------T--TGTTGG--- i cebCap1.NW_016107999v1 C 0 I 29 s aotNan1.NW_018501968v1 1176468 24 - 2246441 TGGTCAGAAATGGGAAA-----------T--TGTTGG--- i aotNan1.NW_018501968v1 C 0 I 29 s proCoq1.NW_012152163v1 775076 24 - 940639 TGGTCAGAAAAGGGAAA-----------T--TGTTGA--- i proCoq1.NW_012152163v1 I 669 C 0 s otoGar3.GL873522 1246113 26 + 48283576 CATTCTGAAAAGGGAAA-----------TTGTGTTAA--- i otoGar3.GL873522 C 0 C 0 s mm10.chr13 65997332 24 - 120421639 TAGCCAGAGACAGGAAA-----------T--GGTTGG--- i mm10.chr13 C 0 C 0 s canFam3.chr4 37177902 24 + 88276631 tagttggaaataggaaa-----------t--tattgg--- i canFam3.chr4 C 0 I 3 s dasNov3.JH562710 265247 27 - 960158 CAGCCAGCAGTGAGAAA-----------T--TGTTGGGAG i dasNov3.JH562710 C 0 C 0 a score=71484.000000 s hg38.chr5_KI270795v1_alt 64516 7 + 131892 GTAAAGA s panTro5.chr5 5314722 7 - 181907262 GTAAAGA i panTro5.chr5 C 0 C 0 s panPan2.chr5 5577239 7 - 183735486 GTAAAGA i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1707198 7 + 3967317 GTAAAGA i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4583824 7 + 163208435 GTAAAGA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5764874 7 - 180051392 GTAAAGA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5951124 7 - 181584905 GTAAAGA i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 981474 7 - 16193990 GTAAAGA i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1802378 7 - 21434487 GTAAAGA i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4764789 7 - 82825804 GTAAAGA i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 270731 7 + 2521317 GTAAAGA i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1752448 7 - 2415367 GTAAAGA i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64095791 4 + 204313951 ---GAAA i calJac3.chr2 C 0 I 14 s saiBol1.JH378186 2220932 4 + 10068113 ---GAAA i saiBol1.JH378186 C 0 I 14 s proCoq1.NW_012152163v1 775100 7 - 940639 GTAAAGA i proCoq1.NW_012152163v1 C 0 C 0 s otoGar3.GL873522 1246139 7 + 48283576 GTAAAGG i otoGar3.GL873522 C 0 C 0 s mm10.chr13 65997356 6 - 120421639 GTAAGG- i mm10.chr13 C 0 C 0 s canFam3.chr4 37177929 7 + 88276631 gtAAAGG i canFam3.chr4 I 3 C 0 s dasNov3.JH562710 265274 7 - 960158 GCAAAGG i dasNov3.JH562710 C 0 C 0 e cebCap1.NW_016107999v1 76211 29 - 709587 I e aotNan1.NW_018501968v1 1176492 29 - 2246441 I a score=711727.000000 s hg38.chr5_KI270795v1_alt 64523 47 + 131892 AAATGCAAATAATACAACCAATGAGAGAATGACAAGCCAGATCCTTC s panTro5.chr5 5314729 47 - 181907262 AAATGCAAATAATACAACCAATGAGAGAATGACAAGCCAGATCCTTC i panTro5.chr5 C 0 C 0 s panPan2.chr5 5577246 47 - 183735486 AAATGCAAATAATACAACCAATGAGAGAATGACAAGCCAGATCCTTC i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1707205 47 + 3967317 AAATGCAAATAATACAACCAATGAGAGAATGACAAGCCAGATCCTTC i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4583831 47 + 163208435 AAATGCAAGTAATACAACCAATGAGAGAATGACAAGCCAGATCCTTC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5764881 47 - 180051392 AAATGCAAATAATACAACCAATGAGAGAATGACAAGCCAGATATTTC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5951131 47 - 181584905 AAATGCAAATAATACAACCAATGAGAGAATGACAAGCCAGATatttc i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 981481 47 - 16193990 AAATGCAAATAATACAACCAATGAGAGAATGACAAGCCAGATatttc i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1802385 47 - 21434487 AAATGCAAATAATACAACCAATGAGAGAATGACAAGCCAGATatttc i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4764796 47 - 82825804 AAATGCAAATAATACAACCAATGAGAGAGTGACAAGCCAGATCCTTC i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 270738 47 + 2521317 AAATGCAAATAATACAACCAATGAGAGAATGACAAGCCAGATATTTC i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1752455 47 - 2415367 AAATGCAAATAATACAACCAGTGAGAGAATGACAAGCCAGATCCTTC i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64095809 47 + 204313951 AAATGCAAACAATACAGCCAATGAGAGAATGACAAGCCAGATCCTTC i calJac3.chr2 I 14 C 0 s saiBol1.JH378186 2220950 47 + 10068113 AAATGCAAACAATACAGCCAATGAGAGCATGACAAGCCAGATCCTTC i saiBol1.JH378186 I 14 C 0 s cebCap1.NW_016107999v1 76240 47 - 709587 AAATGCAAGCAATACAGTCAATGAGAGAATGACAAGCCAGATCCTTC i cebCap1.NW_016107999v1 I 29 C 0 s aotNan1.NW_018501968v1 1176521 47 - 2246441 AAATGCAAACAATACAGCCAATGAGAGAATGACAAGCCAGATCCTTC i aotNan1.NW_018501968v1 I 29 C 0 s proCoq1.NW_012152163v1 775107 47 - 940639 AAATGCAAATAATACAACAAATGAGAAAATGATAAGCCAGTTCCTTC i proCoq1.NW_012152163v1 C 0 I 946 s otoGar3.GL873522 1246146 47 + 48283576 AAATGCAAATAATACAACGAATGAGAAAATGATAAGCCAGTTCCTTC i otoGar3.GL873522 C 0 C 0 s mm10.chr13 65997362 45 - 120421639 AAGTGTAAATAATAGAAGCAA--AGAGAACGATAAGCCAGATGCGCC i mm10.chr13 C 0 C 0 s canFam3.chr4 37177936 44 + 88276631 TCGTGCAAAGAATACA---AGTGAGAAAGTGATATGCTAGACTCTTT i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 265281 42 - 960158 ACATACAAATAACA-----AATGAAAAAATGAAAACCCAGATCCTTC i dasNov3.JH562710 C 0 C 0 a score=1520190.000000 s hg38.chr5_KI270795v1_alt 64570 133 + 131892 ATGCTGAATGg-------taaattctgaagttcctacagtggcctgtgaggccctgtagcatctg--ctgcc--cac-cacaccccttccccacctccttcccct-actcgctgcagccacactggc------ctgcttgctgtttcctgaa s panTro5.chr5 5314776 133 - 181907262 ATGCTGAATGg-------taaattctgaagttcctacagtggcctgtgaggccctgtagcatctg--ctgcc--cac-cacaccccttccccacctccttcccct-actcgctgcagccacactggc------ctgcttgctgtttcctgaa i panTro5.chr5 C 0 C 0 s panPan2.chr5 5577293 133 - 183735486 ATGCTGAATGg-------taaattctgaagttcctacagtggcctgtgaggccctgtagcatctg--ctgcc--cac-cacaccccttccccacctccttcccat-actcgctgcagccacactggc------ctgcttgctgtttcctgaa i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1707252 133 + 3967317 ATGCTGAATGg-------taaattctgaagttcctacagtggcctgtgaggccctgtagcatctg--ctgcc--cac-cacaccccttccccacctccttcccct-actcgctgcagccacactggc------ctgcttgctgtttcctgaa i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4583878 133 + 163208435 ATGCTGAATGg-------taaattctggagtacctacaatggcctgtgaggccctgcagcatttg--ctgcc--cac-cacaccccttccccatctccttcccct-actcgctgcagccacactggc------ctccttgctgtttcctgaa i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5764928 133 - 180051392 ATGCTGAATGg-------taaattctgaagttcctacagtggcctgtgaggccatgcagcatctg--ctgcc--cac-cacaccccttccccatctccttcccct-actcgctgcagccacactggc------ctccttgctgtttcctgaa i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5951178 133 - 181584905 atgctgaatgg-------taaattctgaagttcctacagtggcctgtgaggccctgcagcatctg--ctgcc--cac-cacaccccttccccatctccttcccct-actctctgcagccacactggc------ctccttgctgtttcctgaa i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 981528 133 - 16193990 atgctgaatgg-------taaattctgaagttcctacagtggcctgtgaggccctgcagcatctg--ctgcc--cac-cacaccccttccccatctccttcccct-actcgctgcagccacactggc------ctccttgctgtttcctgaa i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1802432 133 - 21434487 atgctgaatgg-------taaattctgaagttcctacagtggcctgtgaggccctgcagcatctg--ctgcc--cac-cacaccccttccccatctccttcccct-actcgctgcagccacactggc------ctccttgctgtttcctgaa i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4764843 133 - 82825804 ATGCTGAATGg-------taaattctgaagttcctatagtggcctgtgaggccctgtagcatcta--ctgcc--cac-cacaccccttccccatctccttcccct-actcactgcagccacactggc------ctccttgctgtttcctgaa i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 270785 133 + 2521317 ATGCTGAATGg-------taaattctgaagttcctacagtggcctgtgaggccctgcagcatctg--ctgcc--cac-cacaccccttccccatctccttcccct-actcgctgcagccacactggc------ctccttgctgtctcctgaa i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1752502 133 - 2415367 ATGCTGAATGg-------taaattctgaagttcctacagtggcctgtgaagccctgcagcatctg--ctgcc--cac-caccccccttccccatctccttcccct-actcgctgcagccacactggc------ctccttgctgtttcctgaa i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64095856 118 + 204313951 ACACTGGATGg-------taaattctgaagttcctatggtggcctgtgaggccctgcagcatctg--tgtcc--ca----------------gtctccttcccct-acttgccgcagccacgctggc------ttcctggttgtttcctgaa i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2220997 133 + 10068113 AGGCTGGACGg-------taaattctgaagttcctacggtggcctgcgaggccctgcagcatctg--cagcc--cac-caaacctcttctccatctccttcccct-gcttgcggcagccacactggc------ctcctggttgtttcctgaa i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 76287 133 - 709587 ATGCGGGACGG-------TCAATTctgaagttcctcccgtggcctgtgaggccctgcagcatctg--cggcc--cac-caaacctcttctccatctccttcccct-gcttgccacagccacactggc------ctcctggttgtgtcctgaa i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1176568 133 - 2246441 ACGCTAGATGg-------taaaagctgaagttcctacggtggcctgtgaggccctgcagcatctg--cggcc--cac-caaacgtcttctccatctccttcccct-acttgccgcagccacactggc------ctcctggttgtttcctgaa i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1246193 130 + 48283576 GAGTTGAACGG-----TAtaaattctggagt-cctacagtggcctacaaggccctgcgtctcctg--ctatc--cccacatacccttttcttctctttgtcccctcgctctcctca--cacactggc------cttc----tatttcttgag i otoGar3.GL873522 C 0 C 0 s mm10.chr13 65997407 115 - 120421639 CAAGTGAATGA-----TATAAATTCTGCA-------------------AGCCTCTGCTTCATCGGCTCTTCC--AGC-CACACCCCTTCCCTGTCTCCCATCCCT---------CAGTC-CGTTGGCTGCCTGCTCTCTGCTATTTCtttaa i mm10.chr13 C 0 I 3305 s canFam3.chr4 37177980 131 + 88276631 -----GAATAGAAcagtataaattctgaagttcttatgatggcccacaaggcccc-catcatctg--ctgtcataac-tgcaccccctttcctgttactttcctt---tcaccccagccacactggc---------cttgctgtttcttgaa i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 265323 113 - 960158 AAGTTCAAcag-----tataaattctgaagtccttacagtggcctccaaggctcagcatggcctgttctccc--aat-cac------------------tccctc-ac------caaacacatcggc------ctccttgctattgcttaaa i dasNov3.JH562710 C 0 C 0 e proCoq1.NW_012152163v1 775154 946 - 940639 I a score=406720.000000 s hg38.chr5_KI270795v1_alt 64703 38 + 131892 cttcacaggtataattcagcct-cagggc---ctgctgtggt s panTro5.chr5 5314909 38 - 181907262 cttcacaggtataattcagcct-cagggc---ctgctgtggt i panTro5.chr5 C 0 C 0 s panPan2.chr5 5577426 38 - 183735486 cttcacaggtataattcagcct-cagggc---ctgctgtggt i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1707385 38 + 3967317 cttcacaggtataattcagcct-cagggc---ctgctgtggt i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4584011 38 + 163208435 catcgcaggtataattcagcct-cagggc---ctgctgtggt i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5765061 38 - 180051392 catcgcaggtataattcagcct-cagggc---ctgctgtggt i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5951311 38 - 181584905 catcgcaggtataattcagcct-cagggc---ctgctgtggt i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 981661 38 - 16193990 catcgaaggtataattcagcct-cagggc---ctgctgtggt i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1802565 38 - 21434487 catcgcaggtataattcagcct-cggggc---ctgctgtggt i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4764976 38 - 82825804 catcgcaggtataattcagcct-cagggc---ctgctgtggt i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 270918 38 + 2521317 catcgcaggtataattcagcct-cagggc---ctgctgtggt i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1752635 38 - 2415367 catcgcaggtacaattcagcct-cagggc---ctgctgtggt i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64095974 38 + 204313951 cttcgcaggtataattcagcct-cagggc---ctgctgtggt i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2221130 38 + 10068113 cttcgagggtataattcagcct-cagggc---ctgctgtggt i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 76420 38 - 709587 cttcgagggtataattcagcct-cagggc---ctgctgtggt i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1176701 38 - 2246441 cttcgcaggtataattcagtct-cagggc---ctGCTGGGGT i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1246323 23 + 48283576 taTT-------TTTTCTAGCCT-C----C---CCATT----T i otoGar3.GL873522 C 0 C 0 s canFam3.chr4 37178111 35 + 88276631 cataaaaaggctactccagccc-cagggc---ca---ttgca i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 265436 42 - 960158 cagcacaggcatactccagcccataggacatgctgctgtggt i dasNov3.JH562710 C 0 C 0 e mm10.chr13 65997522 3305 - 120421639 I e proCoq1.NW_012152163v1 775154 946 - 940639 I a score=2919235.000000 s hg38.chr5_KI270795v1_alt 64741 300 + 131892 ccaactgtgtccttctgaatctat--gttgaaacctaatccccagtgtgagggtattaggaa-g-ggggcctttgggaggtgagtaggtcatgagggtggagccctcacaaatggaattagtgccctcatcaaagaggccc---------accttgtcctttccactgtgtggggacatggtgagaaagtgccatctgggaaccagaaagcaagctgtc-tgtcattagacaccgaatctgctggtgccctgatcttggacttagcagcttccagaatggttagaagtcaattac--ttgtttataagcttcccat s panTro5.chr5 5314947 300 - 181907262 ccaactgtgtctttctcaatctat--gttgaaacctaatccccagtgtgagggtattaggaa-g-ggggcctttgggaggtgagtaggtcatgagggtggagccctcacaaatggaattagtgccctcatcaaagaggccc---------accttgtcctttccactgtgtggggacatggtgagaaagtgccatctgggaaccagaaagcaagctgtc-tgtcattagacactgaatctgctggtgccctgatcttggactttgcagcctccagaatggttagaagtcaattat--ttgtttataagcttcccat i panTro5.chr5 C 0 C 0 s panPan2.chr5 5577464 300 - 183735486 ccaactgtgtccttctgaatctat--gttgaaacctaatccccagtgtgagggtattaggaa-g-ggggcctttgggaggtgagtaggtcatgagggtggagccctcacaaatggaattagtgccctcatcaaagaggccc---------accttgtcctttccactgtgtggggacatggtgagaaagtgccatctgggaaccagaaagcaagctgtc-tgtcattagacactgaatctgctggtgccctgatcttggacttcgcagcctccagaatggttagaagtcaattat--ttgtttataagcttcccat i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1707423 300 + 3967317 ccaactgtgtccttctgaatctat--gttgaaacctaatccccagtgtgagggtattaggaa-g-ggggcctttgggaggtgagtaggtcatgagggtggagccctcacaaatggaattagtgccctcatcaaagaggccc---------accttgtcctttccactgtgtggggacatggtgagaaagtgccatctgggaaccagaaagcaagctgtc-tgtcattagacactgaatctgctggtgccctgatcttggacttcgcagcctccagaatggttagaagtcaattat--ttgtttataagcttcccat i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4584049 300 + 163208435 ccaactgtgtccttctgaatctat--gttgaaacctaatccccagtgtgagggtattaggaa-g-ggggcctttgggaggtgggtaggtcatgagggtggagcccttacaaatggaattagtgccctcatcaaagaggcct---------gccttgtcctttccaatgtttggggacatggtgagaaagtgccatctaggaaccagaaagcaggctgtc-tgtcattagacactgaatctgctggtgccctgatcttggacttcgcaggctccagaatggttagaagtcaattat--ttgtttataagcttcccat i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5765099 303 - 180051392 ccaactgtgtccttctcaatctgtaagttgaaacctaatccccagtgtgagggtattaggaagg-ggggcgtttgggaggtgagtaggtcatgagggtggagtcctcacaaatggaattagtgcccttatcaaagaggccc---------gccttgtcctttccactatgtggggacatggtgagaaagtgccatctgtgaaccagaaagcagactgtc-tgtcattagacaccgaatctgctggtgccctgatcatggacttctccgcctccggaatggttagaagt-agttac-gttgtttataagcttcccat i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5951349 303 - 181584905 ccaactgtgtccttctcagtctgtaagttgaaacctaatccccagtgtgagggtattaggaagg-ggggcgtttgggaggtgagtaggtcatgagggtggagtcctcacaaatggaattagtgcccttatcaaagaggccc---------gccttgtcctttccactatgtggggacatggtgagaaagtgccatctgtgaaccagaaagcagactgtc-tgtcattagacaccgaatctgctggtgccctgatcatggacttctccgcctctggaatggttagaagt-agttac-gttgtttataagcttcccat i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 981699 303 - 16193990 ccaactgtgtccttctcaatctgtaagttgaaacctaatccccagtgtgagggtattaggaagg-ggggcgtttgggaggtgagtaggtcatgagggtggagtcctcacaaatggaattagtgcccttatcaaagaggccc---------gccttgtcctttccactatgtggggacatggtgagaaagtgccatctgtgaaccagaaagcagactgtc-tgtcattagacaccgaatctgctggtgccctgatcatggacttctccgcctccggaatggttagaagt-agttac-gttgtttataagcttcccat i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1802603 303 - 21434487 ccaactgtgtccttctcaatctgtaagttgaaacctaatccccagtgtgagggtattaggaagg-ggggcgtttgggaggtgagtaggtcatgagggtggagtcctcacaaatggaattagtgcccttatcaaagaggccc---------gccttgtcctttccactatgtggggacatggtgagaaagtgccatctgtgaaccagaaagcagactgtc-tgtcattagacaccgaatctgctggtgccctgatcatggacttctccgcctccggaatggttagaagt-agttac-gttgtttataagcttcccat i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4765014 304 - 82825804 ccaactgtgtccttctcaatctgtaagttgaaacctaatccccagtgtgagggtattaggaagg-ggggcgtttgggaggtgagtaggtcatgagggtggagtcctcacaaatggaattagtgcccttatcaaagaggcca---------gccttgtcctttccactatgtggggacatggtgagaaagtgccatctgtgaaccagaaagcagactgtcttgtcattagacaccgaatctgctggtgccctgatcatggacttctcagcctccggaatggttagaagt-agttac-gttgtttataagcttcccat i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 270956 303 + 2521317 ccaactgtgtccttctcaatctgtaagttgaaacctaatccccagtgtgagggtattaggaagg-ggggcgtttgggaggtgggtaggtcatgagggtggagtcctcacaaatggaattaatgcccttatcaaagaggccc---------gccttgtcctttccattatgtggggacatggtgagaaagtgccatctgtgaaccagaaagcagactgtc-tgtcattagacaccgaatctgctggtgccctgatcatggacttctccgcctctggaatggttagaagt-agttac-gttgtttataagcttcccat i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1752673 304 - 2415367 ccaactgtgtccttctcaatctattagttgaaacctaatccccagggtgagggtattaggaagg-ggggcatttgggaggtgagtaggtcatgagggtggagtcctcacaaatggaattagtgcccttatcaaagaggccc---------gccttgtcctttccactatgtggggacatggtgagaaagtgccgtctgtgaaccagaaagcagactgtc-tgtcattcgacactgaatctgctggtgccctgatcttggacttctcagcctccggaatggttagaagtcaattac-gttgtttctaagcttcccat i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64096012 308 + 204313951 ccaactgtgcccttgtgaatctgtatgttgaaacctaacccccagtgtgagggtgttaggaaggtggggcctttgggaggtgagtaggtcatgagggtggagccctcacaaatgcaattagtgccctcatcaaagaggccccagaaacctgcattgtcctttccactatgtggggacatggtgagaaagtgccatctatgaaccagaaagcaggctgtc-tgtcattagacactgaatctgctgatgccctgat------cttcccagcttccagaatggttagaagccaattat-gttgtttataagtgtcccaT i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2221168 308 + 10068113 ccaactgtgtccttgtgactctgtatgttgaaacctaacccccagtgtgagggtgttaggaaggtagggcccttgggaagtgagtaggtcatgagggtggagccctcacaaatggaattagtgccctcatcaaagaggccccagagacctgcattgtcctttccactatggggggacatggtgagaaagtgccatctatgaaccagcaagcaggctgtc-tatcattagacactgaatctgctgatgccctgat------cttcccagcctccagaatggttagaagccaataac-gttgtttataagcatcccat i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 76458 308 - 709587 ccagctgtgtccttgtgaatctgtatgttgaaacctaacccccagcgtgagggtgttaggaaggcggggcctttgggaggtgagtaggtcatgagggtggaaccctcacaaatggaattagtgccctcatcaaagaggccccagagacctgtgttgtcctttctactatgtggggacatggtgagaaagtgccatctatgaaccagacagcaggctgtc-tgtcattagacactgaatctgctgatgccctgat------cttcccagcctccagaatggttagaagccaattat-gttgtttataagcatcccat i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1176739 308 - 2246441 CCAACtgtgtccttgtgaatctgtatgttgaaacctaacccccagtgtgagggtgttaggaaggtggggactttgggagatgagtaggtcatgagggtggggccctcacaaatggaattagtgccctcatccaagaggtcccagagacctgcactgtcctttccactgtgtggggacatggtgagaaagtgccatctatgaaccagaaagcaggctgtc-tgtcattagatgctgaatctgctgatgccctgat------cttcccagcttccagaatggttagaagccaattat-gttgtttataagcatcccat i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1246346 291 + 48283576 CAAtgtgtccctattttaatccacatattgaaatctggtcaccaatgtga-------------c-aggacttttagga-gtgattaggccatgtggttggagccctcgt-gatgggatttgtgcccttataaaaaaggatccacagatctcccttgccccttccactatgtgaggacacagtaat-aagtactgcttatgagccagaagg--gggtcct-tgcca---gacagtggatctgctggtgtcttggtcttgaacttgtcagcttccagaaccatgaggaataaatttctattgtttagaagccacct-- i otoGar3.GL873522 C 0 C 0 s canFam3.chr4 37178146 109 + 88276631 cttgctgtttcctt---------------------------------------tgtctggaaag---------------------------------------ctttccccttggaatca-tgattttatt-------------------gccttattttgttta---------aatctgaggctccagtgccacctt---accagagag------gcc-ttccat------------------------------------------------------------------------------------------ i canFam3.chr4 C 0 C 0 e mm10.chr13 65997522 3305 - 120421639 I e proCoq1.NW_012152163v1 775154 946 - 940639 I e dasNov3.JH562710 265478 0 - 960158 C a score=21378.000000 s hg38.chr5_KI270795v1_alt 65041 3 + 131892 --ttt s panTro5.chr5 5315247 3 - 181907262 --ttt i panTro5.chr5 C 0 C 0 s panPan2.chr5 5577764 3 - 183735486 --ttt i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1707723 3 + 3967317 --ttt i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4584349 3 + 163208435 --ttt i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5765402 3 - 180051392 --ttt i rheMac8.chr6 C 0 I 326 s macFas5.chr6 5951652 3 - 181584905 --ttt i macFas5.chr6 C 0 I 1 s macNem1.NW_012018466v1 982002 3 - 16193990 --ttt i macNem1.NW_012018466v1 C 0 I 329 s cerAty1.NW_012007035v1 1802906 3 - 21434487 --ttt i cerAty1.NW_012007035v1 C 0 I 1 s chlSab2.chr23 4765318 3 - 82825804 --ttt i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 271259 3 + 2521317 --ttt i manLeu1.NW_012103943v1 C 0 I 1 s colAng1.NW_012115755v1 1752977 3 - 2415367 --ttt i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64096320 3 + 204313951 --TTT i calJac3.chr2 C 0 I 390 s saiBol1.JH378186 2221476 3 + 10068113 --ttt i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 76766 3 - 709587 --ttt i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1177047 3 - 2246441 --ttt i aotNan1.NW_018501968v1 C 0 C 0 s mm10.chr13 66000827 2 - 120421639 ---TT i mm10.chr13 I 3305 I 1 s canFam3.chr4 37178255 3 + 88276631 gat-- i canFam3.chr4 C 0 C 0 e otoGar3.GL873522 1246637 0 + 48283576 C e proCoq1.NW_012152163v1 775154 946 - 940639 I e dasNov3.JH562710 265478 0 - 960158 C a score=246210.000000 s hg38.chr5_KI270795v1_alt 65044 24 + 131892 atggtattttgttagagcagcccc s panTro5.chr5 5315250 24 - 181907262 atggtattttgttagagcagcccc i panTro5.chr5 C 0 C 0 s panPan2.chr5 5577767 24 - 183735486 atggtattttgttagagcagcccc i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1707726 24 + 3967317 atggtattttgttagagcagcccc i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4584352 22 + 163208435 atgatattttgttagagcagcc-- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5765731 24 - 180051392 atggtattttgttatagcagcccc i rheMac8.chr6 I 326 C 0 s macFas5.chr6 5951656 24 - 181584905 atggtattttgttatagcagcccc i macFas5.chr6 I 1 C 0 s macNem1.NW_012018466v1 982334 24 - 16193990 atggtattttgttatagcagcccc i macNem1.NW_012018466v1 I 329 C 0 s cerAty1.NW_012007035v1 1802910 24 - 21434487 atggtattttgttatagcagcccc i cerAty1.NW_012007035v1 I 1 C 0 s chlSab2.chr23 4765321 24 - 82825804 atggtattttgttatagcagcccc i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 271263 24 + 2521317 atggtattttgttatagcagcccc i manLeu1.NW_012103943v1 I 1 C 0 s colAng1.NW_012115755v1 1752980 24 - 2415367 agggtattttgttatagtggcccc i colAng1.NW_012115755v1 C 0 C 0 s saiBol1.JH378186 2221479 24 + 10068113 atggtattttgttacagcagcccc i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 76769 24 - 709587 atggtattttgttatagcagcccc i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1177050 24 - 2246441 atggcattttgttatagcagcccc i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1246637 24 + 48283576 gtcatattttattatagcagcccc i otoGar3.GL873522 C 0 C 0 s mm10.chr13 66000830 24 - 120421639 ATGGTGTTATGTTATAAAGGCCTA i mm10.chr13 I 1 C 0 s canFam3.chr4 37178258 20 + 88276631 actgta----gacaaaaaagcctc i canFam3.chr4 C 0 C 0 e calJac3.chr2 64096323 390 + 204313951 I e proCoq1.NW_012152163v1 775154 946 - 940639 I e dasNov3.JH562710 265478 0 - 960158 C a score=295239.000000 s hg38.chr5_KI270795v1_alt 65068 38 + 131892 aacagacta----agggcctttgcacttgctgtttctctgcc s panTro5.chr5 5315274 38 - 181907262 aacagacta----agggccattgcacttgctgtttctctgcc i panTro5.chr5 C 0 C 0 s panPan2.chr5 5577791 38 - 183735486 aacagacta----agggccattgcacttgctgtttctctgcc i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1707750 38 + 3967317 aacagacta----agggcctttgcacttgctgtttctctgcc i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4584374 36 + 163208435 --cagacta----agggcctttgcacttgccatttctctgcc i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5765755 33 - 180051392 ggcagacta----agggcctttgcacttgccatttct----- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5951680 33 - 181584905 ggcagacta----agggcctttgcacttgccatttct----- i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 982358 33 - 16193990 ggcagacta----agggcctttgcacttgccatttct----- i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1802934 33 - 21434487 agcagacta----agggcctttgcacttgccatttct----- i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4765345 33 - 82825804 ggcagacta----agggcctttgcactggccatttct----- i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 271287 33 + 2521317 agcagacta----agggcctttgcacttgccatttct----- i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1753004 33 - 2415367 agcagacta----agggcctttgcacttgccatttct----- i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64096713 38 + 204313951 AACGGACTA----Tggacctttgcacttgctgtttctctgcc i calJac3.chr2 I 390 C 0 s saiBol1.JH378186 2221503 38 + 10068113 aacggacta----Tggacctttctgcttgctgtttctctgcc i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 76793 38 - 709587 aatggacta----Tggacctttgcacttgctgtttctctgcc i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1177074 38 - 2246441 aacggacta----Tggacctttgcacttgctgtttctaggcc i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1246661 42 + 48283576 agtggactaagacagggcctttgcacttgccagttctatgcc i otoGar3.GL873522 C 0 C 0 s mm10.chr13 66000854 41 - 120421639 CACAGACAA-GATAGGGCCTTCAAACTCCCTGTTCTCTTGTC i mm10.chr13 C 0 C 0 s canFam3.chr4 37178278 10 + 88276631 -------------------------------attccccagt- i canFam3.chr4 C 0 C 0 e proCoq1.NW_012152163v1 775154 946 - 940639 I e dasNov3.JH562710 265478 0 - 960158 C a score=945158.000000 s hg38.chr5_KI270795v1_alt 65106 118 + 131892 cagatgcttttcccttggatatcatggtttatctcctttctttgtttgaaccttagcct----cctatggcacc-ttaccagagaggccttc-catgacaccatgaacaaaggagcgtcacccc s panTro5.chr5 5315312 118 - 181907262 cagatgcttttcccttggatatcatggtttatctcctttctttgtttgaaccttagcct----cctatggcacc-ttaccagagaggccttc-catgacaccaggaacaaaggagcgtcacccc i panTro5.chr5 C 0 C 0 s panPan2.chr5 5577829 45 - 183735486 cagatgcttttcccttggatatcatggtttatctcctt-------------------------------------------------------------------------------tcacccc i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1707788 116 + 3967317 cagatgc-tttcccttggatatcatggtttatctcctttctttgtttgaaccttagcct----cctatggcacc-ttaccagagaggccttc-catgacACCAGGAAC-AAGGAGCGTCACCCC i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4584410 118 + 163208435 cagatgcttttcccttggatatcatggtttatctcctttctttgtttgaacctcagcct----cctatggcacc-ttaccagggaggacttc-catgacaccatgaacaaaggagcctcacccc i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5765788 111 - 180051392 ---gtgcttttcccttggatatcatggtttatctcctt----tgtttaaacctcagcct----cctatggcatc-ttaccagagaggccttc-catgacaccatgaacaaaggagcctcacccc i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5951713 111 - 181584905 ---gtgcttttcccttggatatcatggtttatctcctt----tgtttaaacctcagcct----cctatggcatc-ttaccagagaggccttc-catgacaccatgaacaaaggagcctcacccc i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 982391 111 - 16193990 ---gtgcttttcccttggatatcatggtttatctcctt----tgtttaaacctcagcct----cctatggcatc-ttaccagagaggccttc-catgacaccatgaacaaaggatcctcacccc i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1802967 110 - 21434487 ---gtgcttttcccttggatatcatggtttatctcctt----tgtttaaacctcagcct----cctatggcgtc-ttaccagagaggccttc-catgacaccatgaacaaaggagcctca-ccc i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4765378 112 - 82825804 ---gtgcttttcccttggatatcatagtttatctcctt----tgtttaaacctcagcctgctacgtacggtaca-ttaccagagaggccttc-catgacacc---aacaaaggagcctcacccc i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 271320 110 + 2521317 ---gtgcttttcccttggatatcatggtttatctcctt----tgtttaaacctcagcct----cctatggcatc-ttaccagagaggccttc-catgacaccatgaacaaaggagcctca-ccc i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1753037 111 - 2415367 ---gtgcttttcccttggatatcatggtttatctcctt----tgtttaaacctcagcct----cctatggcacc-ttaccagagaggccttc-catgacaccatgaacaaagcagcctcacccc i colAng1.NW_012115755v1 C 0 I 1 s calJac3.chr2 64096751 107 + 204313951 caga-----ttcccttggatatcatggtttatctcctt----tgtttaaacctcagcct----cctatggcgcc-tcaccagagaggccttc-catgacatcatgaacaaaggagctgcacc-- i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2221541 112 + 10068113 cggatgcttttcccttggatatcatggtttatctcctt----tgtttaaacctcagcct----cctatggtccc-ttaccagagaggccttc-caggacatcatgaacaaaggagctgcacc-- i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 76831 112 - 709587 cagatgcttttcccttggatatcctggtttatctcctt----tgtttaaacctcagcct----cctatggcccc-ttaccagagaggccttc-catgacatcatgaacaaaggagccacacc-- i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1177112 112 - 2246441 cagatgcttttcccttggatatcatggtttatctcctt----tgtttaaacctcagcct----cctatggcccc-ttaccagagacgccttc-catgacatcatgaacaaaggagctacacc-- i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1246703 101 + 48283576 tggatgatttctgcttggaagtcatggttgacctcctt----actttgagtcttacctc------------------accaaagatgccttt-catgacactgtagacgaaagagcctccctcc i otoGar3.GL873522 C 0 C 0 s mm10.chr13 66000895 93 - 120421639 TAGAATTCCTTTTCTGGAACATCATAGTGAATGTCCTT-----GCTTGTATCTTATTCT----CCAGTGTCATC-TGACCGGAGAGCCTTCCTCGTGCCACTC--------------------- i mm10.chr13 C 0 C 0 s canFam3.chr4 37178288 34 + 88276631 ---gtgctt-----------accctgctttattttctt----ctgtaatacc------------------------------------------------------------------------ i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 265478 102 - 960158 --------taaatcttcgatatcatggcttatctcctt----tgcctaaatcttggcct----ccattgtccccattaccagagaggccttc-cgtgacggcctaaatgaaagaacctc----- i dasNov3.JH562710 C 0 C 0 e proCoq1.NW_012152163v1 775154 946 - 940639 I a score=1473362.000000 s hg38.chr5_KI270795v1_alt 65224 156 + 131892 atgcccccatgccctgatcctgctttattttcctctctagtattt--gtgtctgtt--------------------------tacttgtctagtgtatgtctttt-ccccagggatgtcagctctaagaaggcaggaatatgtcatttctctggttccctgctgtgtcct-ctg--agcccagaacat s panTro5.chr5 5315430 157 - 181907262 acgcccccatgccctgatcctgctttattttcctctctagtattt--gtgtctgtt--------------------------tacttgtctagtgtatgtctttttccccagggatgtcagctctaagaaggcaggaatatgtcatttctctggttccctgctgtgtcct-ctg--agcctagaacat i panTro5.chr5 C 0 C 0 s panPan2.chr5 5577874 156 - 183735486 acgcccccatgccctgatcctgctttattttcctctctagtattt--gtgtctgtt--------------------------tacttgtctagtgtatgtctttt-ccccagggatgtcagctctgagaaggcaggaatatgtcatttctctggttccctgctgtgtctt-ctg--agcctagaacat i panPan2.chr5 C 0 C 0 s nomLeu3.chr2 4584528 156 + 163208435 acgcccccatgccgtggtcctgctttattttcctctctagtattt--gtatctgtt--------------------------tacttgtctattgtatgtctttt-ccccagggatgtcagctctaagaaggcaggaatatgtcatttctctggttccctgctgtgtcct-ctg--agcctagaacgt i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5765899 156 - 180051392 cctccccagtgccctgatcctgctttattttcctctctagtattt--gtttctgtt--------------------------tacttgtctattgtgtgtcttct-ccccacggatgtcagctctgaggaggcaggagtatatcatttctctgattcccagctgtgtcct-ctg--agcctggaacat i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5951824 156 - 181584905 cctccccagtgccctgatcctgctttattttcctctctagtattt--gtatctgtt--------------------------tacttgtctattgtgtgtcttct-ccccacggatgtcagctctgagaaggcaggagtatatcatttctctgattcccagctgtgtcct-ctg--agcctggaacat i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 982502 156 - 16193990 cctccccagtgccctgatcctgctttattttcctctctagtattt--gtatctgtt--------------------------tacttgtctattgtgtgtcttct-ccccacggatgtcagctctgagaaggcaggagtatatcatttctctgattcccagctgtgtcct-ctg--agcctggaacat i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1803077 155 - 21434487 cctccccagtgccctgatcctgctttattttcctctctagtattt--gtatctgtt--------------------------tacttgtctatt-tgtgtcttct-ccccatggatgtcagctctgagaaggcaggagtatatcatttctctgattcccagctgtgtcct-ctg--agcctggaacat i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4765490 154 - 82825804 cctccccaataccctgatcctgctttattttcctctctagtattt--gtatctgtt--------------------------tacctgtctattgtgtgtcttct-ccccacagatgtcagctctaagaaggcaggagtatgtcatt--tctgattcccagctgtgtcct-ctg--agcctagaacat i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 271430 156 + 2521317 cctccccagtgccctgatcctgctttattttcctctctagtattt--gtatctgtt--------------------------tacttgtctattgtgtgtcttct-ccccatggatgtcagctctgagaaggcaggagtatatcatttctctgattcccagctgtgtcct-ctg--agcctggaacat i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1753149 156 - 2415367 cctccccaatgccctgattcagctttattttcctctctagtattt--gtatctgtt--------------------------tacttgtctattgtgtgtcttct-ccccacggatgtcagctctaagaaggcaggagtatgtcatttctctgattcccagctgtgtcct-ctg--agcctagaacat i colAng1.NW_012115755v1 I 1 C 0 s calJac3.chr2 64096858 153 + 204313951 ---ccgcaatgccctgatcctgctttattttcctctctaatattt--gtatctgtt--------------------------tatttgtctattgtttgtcttct-ccccagagatgtcagctctaagaaggcaggaatatgtaatttctcttgttccctgctgtgtcct-ctg--aggctagaacat i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2221653 153 + 10068113 ---ccccaatgccctgatcctgctttattttcctctctaatattc--gtatctgtt--------------------------tatttgtctattgtctgtcttct-ccccagagatgtcagctcgaagaaggcaggaataggtaatttctcttgttccctgctgtgtcct-ctg--aggctagaacat i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 76943 153 - 709587 ---ccccagtgccctgatcctgctttattttcctctctaatattt--ctatctgtt--------------------------tatttgtctattgtctgtcttct-ccctagagatgtcagctcgaagaaggcaggaatatgtaatttctcttgttctctgctgtgtctt-ctg--aggctagaacac i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1177224 153 - 2246441 ---ccgaaatgccctgatcctgctttattttcctctctaatattt--gtatctgtt--------------------------tatttgtctattgtctgtcttct-ccccagagatgtcagctctaagaagtcaggactatgtaatttctcttgttccctgctgtgtcct-ctg--aggctagaacat i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1246804 120 + 48283576 -----ctagtgtgcttatgctgttttatgttc--ctctgacattt--gtacttgtt--------------------------tattcctctatcatctgtcttct-ctctagagatgtcagctccaagaaagc-----------------------TCTAGCTG-------CTA--AGCCTAGAACAT i otoGar3.GL873522 C 0 C 0 s mm10.chr13 66000988 135 - 120421639 ATAGTCCAGTGACCCTATTCTGC-TCATTAACCTTTCTAACGGTT--GAATCTTCG--------------------------TGATCGCTTATTGTCTGCCTTG--CCCCAGGGAC---------AGGACATTAGGAGTGC-------------CACCCATGTGCGTCCTGCTGGAAGCCCAGAACAC i mm10.chr13 C 0 C 0 s canFam3.chr4 37178322 105 + 88276631 --------------------------------------------t--gtttctgtt--------------------------t----gcctgctgtctgtttcct-ccatggtgatgtcagatgaaaggaggcaga---gtattctctcttttgttcactgctgtgtctt-caa--agcttagaacTT i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 265580 178 - 960158 gctcccaagtgtccttatcctgtttcatcttcctctacaacctttaggtgtttattactccaaccatctgacagaatgtggctgtttgtctgctgtctgtc--cc-cccacgggctgtcagctctatggaagtggga--aggccacctctctggtacactgctgtatcct-c----agcctaggacaa i dasNov3.JH562710 C 0 C 0 e proCoq1.NW_012152163v1 775154 946 - 940639 I e gorGor5.CYUI01015413v1 1707904 0 + 3967317 C a score=1756244.000000 s hg38.chr5_KI270795v1_alt 65380 167 + 131892 gtacctttaggctcaataaatgcttgtagaata------------aatgaatGAATGACTG--TGTAGTATTAAGCTAAGCCACCCCAGTCCTGGAATGATGTTAA----CTGTTGCTCACATG----------CTCTGT---CCTGTTGCCAGATCCcacacacagctttgagctcctttg----ctctgcacatcagcca s panTro5.chr5 5315587 167 - 181907262 gtacctttaggctcaataaatgcttgtagaata------------aatgaatGAATGACTG--TGTAGTATTAAGCTAAGCCACCCCGGTCCTGGAATGATGTTAA----CTGTTGCTCACATG----------CTCTGT---CCTGTTGCCAGATCCCACACACAGCTTTGAGCTCCTTTG----CTCTGTACATCAGCCA i panTro5.chr5 C 0 C 0 s panPan2.chr5 5578030 167 - 183735486 gtacctttaggctcaataaatgcttgtagaata------------aatgaatGAATGACTG--TGTAGTATTAAGCTAAGCCACCCCGGTCCTGGAATGATGTTAA----CTGTTGCTCACATG----------CTCTGT---CCTGTTGCCAGATCCCACACACAGCTTTGAGCTCCTTTG----CTCTGTACATCAGCCA i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1707904 167 + 3967317 GTACCTTTAGgctcaataaatgcttgtagaata------------aatgaatGAATGACTG--TGTAGTATTAAGCTAAGCCACCCCGGTCCTGGAATGATGTTAA----CTGTTGCTCACATG----------CTCTGT---CCTGTTGCCAGATCCCACACACAGCTTTGAGCTCCTTTG----CTCTGCACATTAGCCA i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4584684 165 + 163208435 gtacctttaggctcaataaatgcttgtagaata------------aatgaatGAATGACTG--TGTAGTATTAAGCTAAGCCACCCCAGTCCTGGAATGATGTTAA----C--TTGCTCACATG----------CTCTGT---CCTGTTGCCAGATCCCACACACAGCCTTGAGCTCCTTTG----CTGTGCACATCAGCCA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5766055 178 - 180051392 atacctttaggcttaataaatgctcgtAgaatgaatgaatgaatgaatgaatgaatgaatg--TGTAGTATTAAGCTAAGCCACCCCGGTCCTGGAATGATGTTAA----CTGTTGCTCACATG----------TTCTGT---CCTATT-CCAGAGCTCACACACAGCCTTGAGTTCCTTTG----CTCTGCACATCAGCCA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5951980 178 - 181584905 atacctttaggcttaataaatgctcgtAgaataaatgaatgaatgaatgaatgaatgaatg--TGTAGTATTAAGCTAAGCCACCCCGGTCCTGGAATGATGTTAA----CTGTTGCTCACATG----------TTCTGT---CCTATT-CCAGAGCTCACACACAGCCTTGAGTTCCTTTG----CTCTGCACATCAGCCA i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 982658 174 - 16193990 atacctttaggcttaataaatgctcgtagaata----aatgaatGAATGAATGAATGAATG--TGTAGTATTAAGCTAAGCCACCCCGGTCCTGGAATGATGTTAA----CTGTTGCTCACATG----------TTCTGT---CCTATT-CCAGAGCTCACACACAGCCTTGAGTTCCTTTG----CTCTGCACATCAGCCA i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1803232 175 - 21434487 atacctttaggctcaataaatgctcgtagaata----aatgaatGAATGAATGAATGACTG--TGTAGTATTACGCTAAGCCACCCCGGTCCTGGAATGATGTTAA----CTGTTGCTCACATG----------CTCTGT---CCTATTGCCAGAGCTCACACACAGCCTTGAGTTCCTTTG----CTCTGCACATCAGCCA i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4765644 171 - 82825804 gtacctttaggctcaataaatgctcgtagaata--------aatgaatGAATGAATGACTG--TGTAGTATTAAGCTAAGCCACCCCGGTCCTGGAATGATGTTAA----CTGTTGCTCACATG----------CTCTGT---CCTATTGCCAGAGCTCACACACAGCCTTGAGTTCCTTTG----CTCTGCACATCAGCCA i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 271586 175 + 2521317 atacctttaggctcaataaacgctcgtagaata----aatgaatGAATGAATGAATGACTG--TGTAGTATTAAGCTAAGCCACCCGGGTCCTGGAATGATGTTAA----CTGTTGCTCACATG----------CTCTGT---CCTATTGCCAGAGCTCACACACAGCCTTGAGTTCCTTTG----CTCTGCACATCAGTCA i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1753305 171 - 2415367 gtacctttaggctcagtaaatgctcatagaata--------aatgaatgaatgaatGACTG--TGTAGTGTTAAGCTAAGCCACCCGGGTCCTGGAATGATGTTAA----CTGTTGCTCACATG----------CTCTGT---CCTATTGCCAGAGAtcacacacagccttgagttcctttg----ctctgcacatcagcca i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64097011 166 + 204313951 ataactttgggctcaataagtgcttgtagaata------------aatgagtGAATGACTG--TGTAGTTTGAAGCCAAGCCACCCCGGTCCTGGAATGATGCTAC----CTATTGCTCACACG----------CTCTGT---CCTATTGCCAGAGCCCACACA-AACCTttagctcctttg----ctctgcacatcagcca i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2221806 161 + 10068113 gtaactttaggctcagtaagtgcttgtagaata------------aatgaatGAATGACCG--TGTAGTTTG-----AAGCCACCCCGGTCCTGGAATGATGCTGC----CTAGTGCTCACATG----------CTCTGT---CCTGTTGCCGGAGCCCACACA-AGCCTTTAGCTCCTTTG----CTCTGCACATCAGCCA i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 77096 166 - 709587 agaactttaggctcaataagtgcttgtagaata------------aatgaatGAACGACTG--TGTAGTTTGAAGCCAAGCCACCCTGGTCCTGGAATGATGCTAC----CTATTGCTCACATG----------CTCTGT---CCTATTGCCGGAGCCCACACA-AGCCTttagctcctttg----ctctgtacatcagcca i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1177377 170 - 2246441 ataactttaggctcaataagtgcttgtagaata------------aatgaatGAATGCCTG--TGTAGTCTGAAGCCAAGCCACCCCGGTGCTGGAATGATGCTACCTGTCTGTCGCTCACATG----------CTCTGT---CCTATTGCCAGAGCCCATACA-AACCTttagctcctttg----ctctgcacatcagcca i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1246924 85 + 48283576 --------------------------------------------------------------------------------------------------GATG--------CTGTTGCTCAGGGGGGGC--CCATCCCTGT---CATGTC-TTTGAGCCC-CACACAACCATTGGCTCCTGTG----ATCTGCGTATCAGCTG i otoGar3.GL873522 C 0 C 0 s mm10.chr13 66001123 161 - 120421639 AGAGCTTTAGACTCGTTGAATGCCTGATGAGTA----------------AATGTGTGCGTG--TGAAATATGAAGCTAAACTACCCAGGCTCTGGA---ATGCTAA----CTGCTGCTCACACGGGTC------CACAGTGGCCCTGTTTGCTGACCTGTCA------GTTTGTCCCCTTCG----CTCTGCATGTCAGCGG i mm10.chr13 C 0 C 0 s canFam3.chr4 37178427 167 + 88276631 GTACTTTTAGGCTCTAGGAATGCAgagtgaatg--------aatgagtgaatgaatgaatg--TTTAATGTTAAGCCAAACCACCCAAATCCTGTAATGCTCCTAT-------AGGCCagcact----------ttctgt---tc-----ccaaagtccttgcacagccattagctcctttgatctatctgcccatgagcca i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 265758 174 - 960158 gcacctgtaggctccatgaatacttgGtgaatg--------aacgaatgaatgagtgaatgaatgCACCGTTAGG---------CCTGGTCCTGTAATGATGTTCA----TCATAGCTTGCGTGGGCCCTCCagtccttc---cctgttttcaaagcctgcgcacagccatttgctcctttg----atctgcacatcagcca i dasNov3.JH562710 C 0 C 0 e proCoq1.NW_012152163v1 775154 946 - 940639 I a score=7960248.000000 s hg38.chr5_KI270795v1_alt 65547 593 + 131892 ggtggggagtgcaggtca-acattattatcTGCCTTAAAAAATAATTATCAATGGCA-AAAAACATCATGATCACCTGGACAGAAACCAAAATGAAATGCCTGC-AGGCTCCTGACTT------GAGC-AAATCAATTTCTAAAATA------------------TGATGTGCAGGAATTGTGACaaagaggatggagtctgcatttcgagacaggttttccctgtgttca-attcccagctcagctatttacttgctctgtgacctgggaccattcaggccccttctgtgagcctcagctatcccttctgt-caa-tggagataattattcccttgaagagatctagtgaagaAGGC--------------ATTTGGACATAGGCATTTCCTGGGCTGCACCATCTACTGTGtatcctttttggtgcctgcataatattccaccaagtagagtcacaggctttgtttaatcaGGTGGCTATTTCCAG--ACGTGG-----Taacaatagcctctattta--------c--------tgatcctgctaagcgccaggccaagc-----ac-tgcaccttcctcatttctccttcagtcctcactgcagccccatcaggtgggtgc-----------tgttaatatttccattttgcacatgagg--------------------ttaggcagcttgcc s panTro5.chr5 5315754 594 - 181907262 GGTGGGGAGTGCAGGTCA-ACATTATTATCTGCCTTAAAAAATAATTATCAATGGCACAAAAACATCATGATCACCTGGACAGAAACCAAAATGAAATGCCTGC-AGGCTCCTGACTT------GAGC-AAATCAATTTCTAAAATA------------------TGATGTGCAGGAATTGTGACaaagaggatggagtctgcatttcgagacaggttttccctgtgttca-gttcccagctcagctatttacttggtctgtgacctgggaccattcaggccccttctgtgagcctcagctatcccttctgt-caa-tggagataattattcccttgcagagatctagtgaagaAGGC--------------ATTTGGACATAGGCATTTCCTGGGCTGCACCATCTACTGTGtatcctttttggtgcctgcataatattccaccaagtagagtcacaggctttgtttaatcaGGTGGCTATTTCCAG--ACGTGG-----Taacaatagcctctattta--------c--------tgatcctgctaagcgccaggccaagc-----ac-tgcaccttcctcatttctccttcagtcctcactgcagccccatcaggtgggtgc-----------tgttaatatttccattttgcacatgagg--------------------ttaggcagcttgcc i panTro5.chr5 C 0 C 0 s panPan2.chr5 5578197 594 - 183735486 GGTGGGGAGTGCAGGTCA-ACATTATTATCTGCCTTAAAAAATCATTATCAATGGCACAAAAACATGATGATCACCTGGACAGAAACCAAAATGAAATGCCTGC-AGGCTCCTGACTT------GAGC-AAATCAATTTCTAAAATA------------------TGATGTGCAGGAATTGTGACaaagaggatggagtctgcatttcgagacaggttttccctgtgttca-atttccagctcagctatttacttgctctgtgacctgggaccattcaggccccttctgtgagcctcagctatcccttctgt-caa-tggagataattattcccttgcagagatctagtgaagaAGGC--------------ATTTGGACATAGGCATTTCCTGGGCTGCACCATCTACTGTGtatcctttttggtgcctgcataatattccaccaagtagagtcacaggctttgtttaatcaGGTGGCTATTTCCAG--ACGTGG-----Taacaatagcctctattta--------c--------tgatcctgctaagcgccaggccaagc-----ac-tgcaccttcctcatttctccttcagtcctcactgcagccccatcaggtgggtgc-----------tgttaatatttccattttgcacatgagg--------------------ttaggcagcttgcc i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1708071 593 + 3967317 GGTGGGGAGTGCAGGTCA-ACATTATTATCTGCCTTAAAAAATAATTATCAATGGCACAAAAACATCATGATCACCTGGACAGAAACCAAAATGAAATGCCTGC-AGGCTCCTGACTT------GAGC-AAATCAATTTCTAAAATA------------------TGATGTGCAGGAattgtgactaagaggatggagtctgcatttcgagacaggttttccctgtgttca-attcccagctcagctatttacttgctctgtgacctggggccattcaggccccttctgtgagcctcagctatccc-tctgt-caa-tggagataattattcccttgaagagatctagtgaagaAGGC--------------ATTTGGACATAGGCATTTCCTGGGCTGCACCATCTACTGTGtatcctttttggtgcctgcataatattccaccaagtagagtcacaggctttgtttaatcaGGTGGCTATTTCCAG--ACGTGG-----Taacaatagcctctattta--------c--------tgatcctgctaagcgccaggccaagc-----ac-tgcaccttcctcatttctccttcagtcctcactgcagccccatcaggtgggtgc-----------tgttaatatttccattttgcacatgagg--------------------ttaggcagcttgcc i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4584849 569 + 163208435 GGTGGGGAGTGCAGGTCA-ACATTATTATCTGCCTTAAAAAATAATTATCAGTGGCACAAAAACATCATGATCACCTGGACAGAAACCAAAATGAAATGCCTGC-AGGCTCCTGACTT------GAGC-AAATCAATTTCTAAAATA------------------TGATGTGCAGAAATTGTG-TTAAGAGGATGGAGTCTGCATTTTGAGG-------------------------CAgcccagctatttacttgctctgtgacctgggaccattcaggccccttctatgagcctcagctatcccttctgt-caa-tggagataattattcccttggagagatctagtgaagaAGGC--------------ATTTGGACATAGGCATTTCCTGGGCTGCACCATCTACTGCGtatcctttttggtgcctgcataatattccaccaagtagaGTCACGGGCTTTGTTTAATCAGATGGCTATTTCCAG--ATGTGG-----Taacaatagcctctattta--------c--------tgatcctgctaggcgccaggccaagc-----ac-tgcaccttcctcatctctccttcagtcctcgctgcagccccatcaggtgggtgc-----------tgttaatatttccgttttgcacatgagg--------------------ttaagcagcttgcc i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5766233 593 - 180051392 GGTGGGGAGTGCAGGTCA-ACATTATTATCTGCCTTAAGTAATAATTATCAATGACACAAAAGCATCATGATCACCTGGACAGAAACCAAAATGAAATGCCTGC-AGGCTCATGACGT------CAGC-AAATCAGTTTCTAAAATA------------------TGATGTGCAGGAATTGTGACaaagaggatggagtctgcattgtgaggcagattttccctgtgttca-attcccagctcagctatttacttactctgtgacctgggaccattcaagccccttctgtgagcctcagctatcccttctgt-caa-cggagatcatgattccCTTGAATAGATCTAGTGAAGAAGGC--------------ATTTGGACCTAGGCATTTCCTGGGCTGCACCATCCACTGTGTTTCCTTTTTGGTGCCAGCATAATATTCCACCAAGTAGAGTTACATGCTTTGTTTAATCAGGTGGCTATTTCCAG--ACATGG-----TAACAGTAGCCTCcattta--------c--------tgat-ctgctaggtgcaaggccaagc-----ac-tgcaccttccttatccctccttcagtcctcgctgcagccccgtcaggtgggtgc-----------tgttaatatttccattttgcatatgagg--------------------ttaagcagcttgtc i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5952158 593 - 181584905 GGTGGGGAGTGCAGGTCA-ACATTATTATCTGCCTTAAATAATAATTATCAATGACACAAAAGCATCATGATCACCTGGACAGAAACCAAAATGAAATGCCTGC-AGGCTCATGACGT------CAGC-AAATCAGTTTCTAAAATA------------------TGATGTGCAGGAATTGTGACaaagaggatggagtctgcattgtgaggcagattttccctgtgttca-attcccagctcagctatttacttactctgtgacctgggaccattcaagccccttctgtgagcctcagctatcccttctgt-caa-cggagatcatgattcccttgaatagatctagtgaagaAGGC--------------ATTTGGACCTAGGCATTTCCTGGGCTGCACCATCCACTGTGTTTCCTTTTTGGTGCCAGCATAATATTCCACCAAGTAGAGTTACATGCTTTGTTTAATCAGGTGGCTATTTCCAG--ACATGG-----Taacagtagcctccattta--------c--------tgat-ctgctaggtgcaaggccaagc-----ac-tgcaccttccttatccctccttcagtcctcgctgcagccccgtcaggtgggtgc-----------tgttaatatttccattttgcatatgagg--------------------ttaagcagcttgtc i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 982832 591 - 16193990 GGTGGGGAGTGCAGGTCA-ACATTATTATCTGCCTTAAATAATAATTATCAATGACACAAAAGCATCATGATCACCTGGACAGAAACCAAAATGAAATGCCTGC-AGGCTCATGATGT------CAGC-AAATCAGTTTCTAAAATA------------------TGATGTGCAGGAATTGTgac--agaggatggagtctacattgtgaggcagattttccctgtgttca-attcccagctcagctatttacttactctgtgacctgggaccattcaagccccttctgtgagcctcagctatcccttctgt-caa-cggagatcatgattcccttgaatagatctagtgaagaAGGC--------------ATTTGGACCTAGGCATTTCCTGGGCTGCACCATCCACTGTGTTTCCTTTTTGGTGCCAGCATAATATTCCACCAAGTAGAGTTACATGCTTTGTTTAATCAGGTGGCTATTTCCCG--ACATGG-----TAACAGTAGCCTCcattta--------c--------tgat-ctgctaggtgcaaggccaagc-----ac-tgcaccttccttatccctccttcagtcctcgctgcagccccgtcaggtgggtgc-----------tgttaatatttccattttgcatatgagg--------------------ttaagcagcttgtc i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1803407 593 - 21434487 GGTGAGGAGTGCAGGTCA-ACGTTATTATCTGCCTTAAATAATAATTATCAATGACACAAAAGCATCATGATCACCTGGACAGAAACCAAAATGAAATGCCTGC-AGGCTCATGACGT------CAGC-AAATCAGTTTCTAAAATA------------------TGATGTGCaggaattgtgacaaagaggatggagtctgcattgtgaggcagattttccctgtgttca-attcccagctcagctatttacttactctgtgacctgggaccattcaagccccttctgtgagcctcagctatcccttctgt-caa-cggagatcatgattcccttgagtagatctagtgaagaaGGC--------------ATTTGGACCTAGGCATTTCCTGGGCTGCACCATCCACTGTGTTTCCTTTTTGGTGCCAGCATAATATTCCACCAAGTAGAGTCACATGCTTTGTTTAATCAGGTGGCTATTTCCAG--ACATGG-----TAACAGTAGCCTCcattta--------c--------tgat-ctgctaggcgcaaggccaagc-----ac-tgcaccttccttatctctccttcagtcctcactgcagtcccgtcaggtgggtgc-----------tgttaatatttccattttgcatatgagg--------------------ttaagcagcttgtc i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4765815 593 - 82825804 GGTGGGGAGTGCAGGTCA-ACATTATTATCTGCCTTAAAAAATAATTATCAATGGCACAAAAGCATCATGATCACCTGGACAGAAACCCAAATGAAATGCCTGC-AGGCTCATGACGT------CAGC-AAATCAGTTTCTAAAATA------------------TGATGTGCAGGAATTGTGAgaaagaggatggagtctgcatttcgaggcaggttttccctgtgttca-attcccagctcagctgtttacttactctgtgacctgggaccattcaagccccttctgtgagcctcagctgtcccttctgt-caa-cggagatcatgattccCTTGAGTAGATCTAGTGAAGAAGGC--------------ATTTGGACATAGGCATTTCCTGGACTGCACCATCCACTGTGTTTTCtttttggtgcctgcataatattccaccaagtagagtcacatgctttgtttaatcaGGTGGCTATTTCCAG--ACATGG-----TAACAGTAGCCTCcattta--------c--------tgat-ccgctaggcgcaaggccaagc-----ac-tgcaccttccttatctctccttcagtcctcgctgcagccccgtcaggtgggtgc-----------tgttaatatttccattttgcatatgagg--------------------ttaagcagcttgtc i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 271761 593 + 2521317 GGTGAGGAGTGCAGGTCA-ACGTTATTATCTGCCTTAAATAATAATTATCAATGACACAAAAGCAGCATGATCACCTGGACAGAAACCAAAATGAAATGCCTGC-AGGCTCATGACGT------CAGC-AAATCAGTTTCTAAAATA------------------TGATGTGCaggaattgtgacaaagaggatggagtctgcattgtgaggcagattttccctgtgttca-attcccagctcagctgtttacttactctgtgacctgggaccattcaagccccttctgtgagcctcagctgtcccttctgt-caa-cggagatcatgattcccttgagtagatctagtgaagaaGGC--------------ATTTGGACCTAGGCATTTCCTGGGCTGCACCATCCACTGTGTTTCCTTTTTGGTGCCAGCATAATATTCCACCAAGTAGAGTCACATGCTTTGTTTAATCAGGTGGCTATTTCCAG--ACATGG-----TAACAGTAGCCTCcattta--------c--------tgat-ctgctaggcgcaaggccaagc-----ac-tgcaccttccttatctctccttcagtcctcactgcagtcccgtcaggtgggtgc-----------tgttaatatttccattttgcgtatgagg--------------------ttaagcagcttgtc i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1753476 593 - 2415367 ggtggggagtgcaggtca-atattattatctgccttAAAAAATAATTATCAATGACACAAAAGTATCATGATCACCTGGACAGAAACTAAAATGAAATTCCTGC-AGGCTCATGACTT------CAGC-AAATCAGTTTCTAAAATA------------------TGATGTGCaggaattgtgacaaagaggatggagtctgcatttcgaggcaggttttccctgtgttca-attcccagctcagctatttacttactctgtgacctgggaccattcaagtcccttcagtgagcctcagctatcccttctgt-cag-cggagatcatgattcccttgagtagatctagtgaagaaGGC--------------ATTTGGACATAGGCATTTACTGGGCTGCACCATCCACTGTGTTtcctttttggtgcctgcataatatttcaccaagtggagtcacatgctttgtttaatcaggcggctatttccag--acatGG-----TAACAGTAGCCTCcattta--------c--------tgat-ccgctaggcgcaaggccaagc-----ac-tgcaccttccttatctctccttcagtccttactgcagccccctcaggtgggtgc-----------tgttaatatttccattttgcatatgagg--------------------ttaagcagcttgtc i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64097177 592 + 204313951 ggtggggagtgcaggtcaggcattattatcTGCCTTAAAAAATGATTTTCAATGGCACAGCAA---CATGATCACCTGGACAGAAACCAAAATGAAA-GCCTGC-AGGCTCATGACTT------CAGC-AAATCAGTTTCTAAAATA------------------CGGTGTGCAGGAattgtgactgagaggatagaatctgcattttgaggcagattttctccgtattca-attcccagctcagccatttacttactctgtgacctgggaccgctcaaggcccttctatgtgcctcaactatcccttctgtaaaa-tggagatgattattcccttgaatagctctagtgaggGAGGC--------------ACTTGGACATAGGCATTTCCTGGGCTGCACCATCTACTGTGTATCCATTTTGGTGCCTGCATAATATTCCACCGAGTAGAGTCACATGCTTTGCTTAATCAGGTGGCTATTTCCAG--ATGTGG-----Taacagtagcctccattta--------c--------tgatcctgccgggtgccaggcagagc-----ac-tgcacctcccttatctctccttcaatcctcgctgcagccccatcaggtggcttc-----------tgttaatatttccattttgcttatgagg--------------------tgaagcagcttgcc i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2221967 595 + 10068113 GGTGGGGAGTGCAGGTCAGGCATTCTTATCTGCCTTAAACAGTGATTATCAATGGCACAGCAACATCATGATCACCTGGACAGAAAGCAAAATGAAATGCCTGC-AGGCTCATGACTT------CAGC-AAATCAGTTTCTAAAATA------------------CGGTGTGCAGGAATTGTCACTAagaggatagagtctgcattttgaggcaggttttctctgtattca-attcccagctcagccatttacttactctgtgacctgggaccgttcaagccccttctatgagcctcagctatcccttctgtaaaa-tggagatgatcattcccttgaatagctctagtgaggGAGGC--------------ATTTGGACACAGGCATTTCCTGGGCTGCACCATCTACTGTGTATTCATTTTGGTGCCTGCATAATATTCCACCGAGTCAAGTCACACGCTCTGCTTAATCAGGTGGCTATTTCCAG--GTGTGG-----Taacagtagcctccattta--------c--------tgatcctgctgggcaccaggc-gagc-----ac-tgcaccttcctcatctctccttcagtcctcgctgcagctccgtcaggtggctgc-----------tgttaatatttccattttgcatatgagg--------------------tgaagcagctcgtc i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 77262 601 - 709587 ggtggggagtgcaggtcaggcatgattatctgccttaaaaaatgaTTATCAATGGCACAGCAACATCA--GTCACCTGGACAGAAACCAGAATGAAACACCTGC-AGGCTCATGACTTAGAAACAGGC-AAATCAGTTTCTAAAATA------------------TGGTGTGCAGGAATTGTGACTaagaggatggagtctgcattttgaggcaggttttctctgtattca-attcccagctcagccatttacttattctgtgatctgggaccgctcaagccccttctatgagcttcagctatccctcctgtaaaa-cggagatgattattcccttgaatagctctagtgaggGAGGC--------------ATTTGGACATAGGCATTTCCTGGGCTGCACCATCTACTGTGtatccattttggtgcctgcataatattccacccagtagagtcacatgctttgcttaatcaGGTGGCTATTTCCAGGTGTGTGG-----taacagtagcccccattaa--------c--------tgatcctgctgggcaccaggcagagc-----ac-tgcacctttcttatctctccttcagtcctc-ctgcagccccatcaggtggctgc-----------tgttaatatttccattttgaacatgagg--------------------tgaagcagctcgcc i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1177547 614 - 2246441 ggtggagagtgcaggtcaggcattattatccGCCTTAAAAAATGATTATCAATGGCACAGCAACATCATGATCACCTGGACAGAAACCAAAATGAAATGCCTGC-AGGCTCATGACTT------CAGC-AAATCAGTTTCTAAAATATGAAGCCCAAAGGTCATCTGGTGTGCaggaattgtgactaagagggcagagtctgcattttgaggcaggttttctctgtattca-attcccagctcagccatttacttactctgtgacctgggaccgctcaagccccttctatgagcctcagctatcccttctgtaaaa-tggagatgattattcccttgaatagctctagtgaggGAGGC--------------ATTTGGACAAAGGCATTTCCTGGGCTGCACCATCTACTGTGtatccattttggtgcctgcataatattccaccaagtagagtcacatgctttgcttaatcaGGTGGCTATTTCCAG--ATGTGG-----Taacagtagcctccattta--------c--------tgatcctgctgggcgccaggcagggc-----ac-tgcacctcccttatctctccttcggtcctcgatgcagccccatcaggtggctgc-----------tgttaatatttccattttgcatatgagg--------------------tgaagcagcttgcc i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 776100 591 - 940639 ggtggggagtgcagggcaggcattattatctgccttAAGAAAACATTATCTATGGCACAAAAACATCATGAGCACACGGACAGAAACCATAATGAAATGCCTAC-AGGCTCACGTCTT------CAGT-GAATCAATTTTTAAAATT------------------TGATGGGCaggaattatgacaaagaggaaagagtctgcgtcttgaggcaggtattccctgcgttca-atttccagctcagcggtttatttactctgtgaccttggaccaattaagccccttctatgagccttggctgccccttctgc-aga-tggaggtaa-ggttccctgGGATAGGTAGAGTGCAGAAGGC--------------GTTTCAACATGGGCGTTTCCTGGGTTGCACCATCTACTGCGTTTCCTTT-TGCAGCCTGGGTAATGTTCCACCGAGCAGAGTCACATGCTTTGCTCAGTCAGTTGACTATTTCTGC--ACATGG-----Taacaggagcccccattta--------t--------tcatcctgcccagtgccaggccaagt-----ac-tgttcctttgctatt--tcatccagtccgtgctgcaaccccatgaggggggtgc-----------cgttaatactcccatttcgcatatgagg--------------------ttaagcagcttgcc i proCoq1.NW_012152163v1 I 946 I 290 s otoGar3.GL873522 1247009 605 + 48283576 GGTGAGGAGTGTGAGACAAGCATTATTACCTGCCTTAAGAAATCATTAT-TATGACACAAAAACATTATGAGCACATGGACAGAAACCAGAATGAAATGCCTAC-AGGCTCACAACTT------CAGC-ATAACAATTTTTAAAATT------------------TGATAGGCaggaattttggcaaagagaacagagcctgcattttgagacaggtgttccctgcattcatatttccagctcagctgtttacttactctgtgacctgggaacaattaagccccttctatgagccttggctaccccttttat-aga-tgaaagtaa-gattccctCAACTAGGTCTAGTGTAGAAGGCCTGTAATGCCATCTCTTTGAACATGGGCATTTCCTGGACTGCACCATCTGCTGTGTATCCTTTATGCAACCTATGTAGTGTTCCACCAAGCAGAGTCACATGCTTTCCTTAATTGGTTGACTATTTCTGG--ACATGG-----taacagtagcccccattta--------t--------tcatcctgttgagtgtcagggcaagc-----at-tgttccttccttatt--tcattcaatcc-tgctacaaccccatgaggtaggtgt-----------tgttaacactcccattttccatatgagg--------------------ttaagcagcctgcc i otoGar3.GL873522 C 0 C 0 s mm10.chr13 66001284 510 - 120421639 ----GAAAG----------GGATGATGACAAGCCTTCAAGAGTGATTAGCGATGGCCCAGGGGCTTCACAATCCACAGAACTGGGAC---------------GC-AGGCTCATGGCTG------CAGCAAAATCACATTTCAAAATC------------------TGATGCGTGGGAATTGCAGCAGCGTGGGAAGGGTCTGTGTTCTGAAGCAGGTACTTCCTGGGTTCA-CCTCCCAGCTCAGCTGT------------TGACCCGAGATCAAGAAAGGCCCCACTGTGAGCCTTGGCTGACCC----GT-GAA-CAGGGA----------------------------------C--------------ATTTCAATAGGACCATTTCCTGGACTGCACTATTTGTTTTTCATCCTTTTAGGGACCCAGGTAAACT-----------GAGTCATGTGCTTT-CATAATCAGTTGATCATTTCTGG--ATACAGTAACATAACAGTATTTTCCATGTA--------C--------TGATCATACTAGCAGCTTGCCTAAGCCCTAAGC-TGAAGCTACCCTACT--TCCTTCAGACTCCTCTGCAACgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtTGCAAATGATG---------------------------------- i mm10.chr13 C 0 C 0 s canFam3.chr4 37178594 578 + 88276631 catggggagcacaggacaggcattaatatcTGCCTTAAAAAGTGATTATCTATGGCAGAAGAACATCATGATCACATGGACAGAAGTCagagcgaaatgcctgcaaggctcaagactt------taat-aaatcatttttttaaatt------------------cgacgtgcaggaattgtagcaaagaagaaagagtctgcattctgaggcaggtcttccttgcattcc-atttcccgcatggctgtttatttactctgcaacctgggacaaatccagccccttctctgaggcttggccaccccttctgt-aaattggagataa-gattccctCAAGTAGGTATAGTACAG-AGGC--------------ATTTTAACACAGGCATTTCCTGGGCCACACCATCTTGTATGCATCCTTTTTGGAGGTTGTGTAGTATTCCACAGA------------------CTTAACCAGTTGACTGTTGCTGG--ACATGG-----TGatagtatctaccatttattgagcgct--------tgatcctgccaggtgccaggccaagc-----ag-agcatctttattagc--ttattcagtccttactgctac----tcaggtgggtg------------tgttcactctcctgtttggcagatgggg--------------------ttaagtgacttgcc i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 265932 591 - 960158 gatggggagtgcagggcagggattattatccgccttAGAAAGTGATTATTTATGGCACGAAAACATCATGATCACATGGACAGAAATCAGAATGAAATGCCCAC-AGGCTGATGATGT------CAAC-AAATCAATTTTTAAAATC------------------TGATGTGCAggcactgtggc--agcggaaaaagccagctttgtaagccaggc-ttccctgagttca-tatccctgcttagctattgacttgctctgtgacctg----caattcagtcccttttttgagccttggctaccccttctataaga-tggagatga-cattccctCAAATAGGTATACTGCAAAATGC--------------ATTTTAATGTTGGTGCTTCTTGGGTCACACCATCCACTATATCTCCTTTCTG----------------------AATAGAGTCGTATGCTTTG-TTGATCAGTCTACTATTTCTGG--ATATGA-----Gaatggtagctgccactta--------ctgagtgcttgatcctgctgtgtaccaggcctagt-----acttgtgtattcat--gctctcatttaatcttcatt-taaccccaggacacaggtac-----------tgttaacactcccattttgcagatggggaaagagaggctcagaatggggtaggcagtttacc i dasNov3.JH562710 C 0 C 0 a score=2130278.000000 s hg38.chr5_KI270795v1_alt 66140 182 + 131892 caaggccacgcagccc-cactaaatgga-agat-----atggagttgaaagccaagttgtcaaatccaagagctttcatc--tctgtgctTTggtgggacttttgtc-----ccccattttgcagat--g--gaaaatgaggcttggggaggccagca-acttgcccagggcaacagcgagcagagctgggatgag-tcgga s panTro5.chr5 5316348 182 - 181907262 caaggccatgcagccc-cactaaatgga-agat-----atggaggtgaaagccaagttgtcaaatccaagagctttcaac--tctgtgctttggtgggacttttgtc-----ccccattttgcagat--g--gaaaatgaggcttggggaggccagca-acttgcccagggcaacagcgagcagagctgggatgag-tcgga i panTro5.chr5 C 0 C 0 s panPan2.chr5 5578791 182 - 183735486 caaggccatgcagccc-cactaaatgga-agat-----atggaattgaaagccaagttgtcaaatccaagagctttcaac--tctgtgctttggtgggacttttgtc-----ccccattttgcagat--g--gaaaatgaggcttggggaggccagca-acttgcccagggcaacagcgagcagagctgggatgag-tcgga i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1708664 182 + 3967317 caaggccacgcagccc-cactaaatgga-agat-----atggagttgaaagccaagttgtcaaatccaagagctttcaac--tctgtgctttggtgggacttttgtc-----ccccattttgcagac--g--gaaaatgaggcttggggaggccagca-acttgcccagggcaacagcgagcagagctgggatgag-tcgga i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4585418 180 + 163208435 caaggccacatagccc-ccctaaatgga-agat-----acggagttgaaagccaagttgtcaaatccaagagCTTTcaac--tc--tgctttggtgggacttttgtc-----ccccattttgcagat--g--gaaaatgaggcttggggaggccagtg-acttgcccagggcaacagcgagcagagctgggatgag-tcgga i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5766826 183 - 180051392 caaggccacacagccc-ccctaaatgga-agat----aatggagttgaaagccaagttgtcaaatccaagagctttcaac--tctgtgctttggtgggatttttgtc-----ccccattttgcagat--g--gaaaatgaggcttggggaggccagca-acttgcccagggcaacagtgagcagagctgggatgag-tcaga i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5952751 183 - 181584905 caaggccacacagccc-ccctaaatgga-agat----aatggagttgaaagccaagttgtcaaatccaagagctttcaac--tctgtgctttggtgggatttttgtc-----ccccattttgcagat--g--gaaaatgaggcttggggaggccagca-acttgcccagggcaacagtgagcagagctgggatgag-tcaga i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 983423 171 - 16193990 caaggccacacagccc-ccctaaatgga-agat----aatggagttgaaagccaagttgtcaaatccaagagCTT--------------TTTggtgggatttttgtc-----ccccgttttgcagat--g--gaaaatgaggcttggggaggccagcg-acttgcccagggcaacagtgagcagagctgggatgag-tcaga i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1804000 181 - 21434487 caaggccacacagccc-ccctaaatgga-agat----aatggagttgaaagccaagttgtcaaatccaagagCTTTcaac--tctgc--tttggtgggatttttgtc-----ccccattttgcagat--g--gaaaatgaggcttggggaggccagcg-acttgcccagggcaacagtgagcagagctgggatgag-tcaga i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4766408 183 - 82825804 caaggccacacagccc-ccctaaatgga-agat----aatggagttgaaagccaagttgtcaaatccaagagctttcaac--tctgtgctttggtgggatttttgtc-----ccccattttgcagat--g--gaaaatgaggcttggggaggccagcg-acttgcccagggcaacagtgagcagagctgggatgag-tcaga i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 272354 183 + 2521317 caaggccacacagccc-ccctaaatgga-agac----aatggagttgaaagccaagttgtcagatccaagagctttcaac--tctgtgctttggtgggatttttgtc-----ccccattttgcagat--g--gaaaatgaggcttggggaggccagcg-acttgcccagggcaacagtgagcagagctgggatgag-tcaga i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1754069 183 - 2415367 caaggccacacaaccc-ccctaaatgga-agat----aatggagttgaaagccaagttgtcaaatccaagagctttcaac--tctgtgctttggtgggatttttgtc-----ccccattttgcagat--g--gaaaatgaggcctgaggaggccagcg-acttgcccagggcaacagtgagcagagctgggatgag-tcaga i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64097769 180 + 204313951 cacagccacacagcca-tgctaaatgga-agat-----atggaattgaaagccaagttgtcaaatccaagagctttcaac--tctgtgctctggtgggattgctgt------ccccattttacagat--g--gaaaatgaggcgt-gggaggccagtg-acttgcccagggcaacacagagcagagctgggataag-tcaga i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2222562 181 + 10068113 cacggccacacagccc-tgctaaatgga-agac-----atggaattgaaagccaagttgtcgaatccaagagctttcaac--tctgtgctttggtgggattgctgt------ccccattttacagat--g--gaaaatgaggcgtggggaggccagtg-acttgcgcagggcaacactgagcagagctgggatgag-tcaga i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 77863 181 - 709587 cacggccacacagccc-tgctaaatgga-agat-----acggaattgacagccaagttgtcgaatccaagagctttcaac--tctgtgctttggtgggattgctgt------ccccattttacagat--g--gaaaatgaggcatggggaggccagtg-acttgcccagggcaacactgagcagggctggagtgag-tcaga i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1178161 181 - 2246441 cccggccacacagccc-tgctaaatgga-agat-----atggaattgaaagccaagttgtcaaatccaagagctttcaac--tctgtgctttggtgggattgctgt------ccccattttacagat--g--taaaatgaggcatagggaggccagtg-acttgcccagggcaacaccgagcagagctgggatgag-tcaga i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1247614 191 + 48283576 cagggccacgaagcca-CCCTAAATGCCTACATTTCAGGTGGAACTGAAAGCCAAGTTGCCAAACCTGACAGCTTTCAATTATTTGTGCTCTAGTGGGATTTGGGG------cctcattttatagacagg--gaaaatcaggcttaaggcacccagtg-acttgcctgaggcaacactagacagagctaggataag-ataga i otoGar3.GL873522 C 0 C 0 s mm10.chr13 66001794 108 - 120421639 -----CCACACAACTC-AGAGCAATGGA-AGGT-----CTGGGATTGGATGGCAAACTGTCATTTCTGAGATCTTCCAACTTTTTATGCTGGGATAGAATTTTGTTC-----C-------------T--G--AAAAAAAAAA------------------------------------------------------------ i mm10.chr13 C 0 C 0 s canFam3.chr4 37179172 184 + 88276631 caaggccacatagact---ataaatgaa-ggag-----taggaatcagaagccatataatcaaacttgagaactttaagctctctgtgctatagtaagatttttgt------ccctattttacgaac--aacaaaaatgaagctcacagaggtcaaca-acttgccctagggagcactgagcagagctggggtgagaacaga i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 266523 190 - 960158 caaggccacacagtccatcctaaatgga-ggag------tagagttggaagccaaattgttgaacctgagagctttaaatcacttgtgttctAGAGGGGTTTTTtccccccaccccattttacagat--gagaaaaatgaggctcagggacaccaatgaactttccca--gcaacaccaggcagagctgggatgag-acaga i dasNov3.JH562710 C 0 C 0 e proCoq1.NW_012152163v1 776691 290 - 940639 I a score=97571.000000 s hg38.chr5_KI270795v1_alt 66322 9 + 131892 atccaagtc s panTro5.chr5 5316530 9 - 181907262 atccaagtc i panTro5.chr5 C 0 C 0 s panPan2.chr5 5578973 9 - 183735486 atccaagtc i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1708846 8 + 3967317 atcc-agtc i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4585598 9 + 163208435 atccaagtc i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5767009 9 - 180051392 atccaagtc i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5952934 9 - 181584905 atccaagtc i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 983594 9 - 16193990 atccaagtc i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1804181 9 - 21434487 atccaagtc i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4766591 9 - 82825804 atccaagtg i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 272537 9 + 2521317 atccaagtc i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1754252 9 - 2415367 atccaagtc i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64097949 9 + 204313951 acccaagtc i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2222743 9 + 10068113 acccaactc i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 78044 9 - 709587 acccaagtc i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1178342 9 - 2246441 acccaagtc i aotNan1.NW_018501968v1 C 0 C 0 s canFam3.chr4 37179356 9 + 88276631 aaccaagtc i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 266713 9 - 960158 aaccagatc i dasNov3.JH562710 C 0 I 4 e mm10.chr13 66001902 0 - 120421639 C e otoGar3.GL873522 1247805 0 + 48283576 C e proCoq1.NW_012152163v1 776691 290 - 940639 I a score=-57711.000000 s hg38.chr5_KI270795v1_alt 66331 7 + 131892 tacca----------------------------------------at s panTro5.chr5 5316539 7 - 181907262 tacca----------------------------------------at i panTro5.chr5 C 0 C 0 s panPan2.chr5 5578982 7 - 183735486 tacca----------------------------------------aa i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1708854 7 + 3967317 tacca----------------------------------------at i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4585607 7 + 163208435 tacca----------------------------------------ac i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5767018 34 - 180051392 taccaattctt------------ttttattttatttta-ttttttat i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5952943 34 - 181584905 taccaattctt------------ttttattttatttta-ttttttat i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 983603 34 - 16193990 taccaattctg------------ttttattttatttta-ttttttat i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1804190 44 - 21434487 taccAATTCTT--ttttattttattttattttatttta-ttttTTAt i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4766600 37 - 82825804 taccaattc-----tttattttattttattttat-----ttttttat i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 272546 44 + 2521317 taccAATTCTT--ttttattttattttattttatttta-ttttTTAt i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1754261 47 - 2415367 taccAATTCTTTATTTTAttttgttttgttttgttttatttttttat i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64097958 24 + 204313951 tacTGAttc----------------ttttttt-------tttttttt i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2222752 21 + 10068113 tatcgattc-------------------tttt-------tttttttt i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 78053 21 - 709587 taccgattt-------------------tttt-------tttttttt i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1178351 28 - 2246441 tactgattctt------------ttttttttt-------tttttttt i aotNan1.NW_018501968v1 C 0 C 0 s mm10.chr13 66001902 20 - 120421639 ---------------------------ATCTTAATTTAtttattgtc i mm10.chr13 C 0 C 0 s canFam3.chr4 37179365 7 + 88276631 ttccaat---------------------------------------- i canFam3.chr4 C 0 C 0 e otoGar3.GL873522 1247805 0 + 48283576 C e proCoq1.NW_012152163v1 776691 290 - 940639 I e dasNov3.JH562710 266722 4 - 960158 I a score=1572646.000000 s hg38.chr5_KI270795v1_alt 66338 165 + 131892 tgagatggagtctcactctgtcacccaggctagagtgcagcagcgcaatctcggctcactgcaacctccacctcctgggttcaagcagttctcctgcctcagcctcccgagtagctgggactacaggcatgcaccatgaca-c--cggctagtttttgtatttttagt s panTro5.chr5 5316546 165 - 181907262 tgagatggagtctcactctgtcacccaggctagagtgcagcagcgcaatctcggctcactgcaacctccacctcctgggttcaagcagttctcctgcctcagccttccgagtagctgggactacaggcatgcaccatgaca-c--cggctagtttttgtatttttagt i panTro5.chr5 C 0 C 0 s panPan2.chr5 5578989 165 - 183735486 tgagatggagtctcactctgtcacccaggctagagtgcagcagcgcaatctcggctcactgcaacctccacctcctgggttcaagcagttctcctgcctcagccttccgagtagctgggactacaggcatgcaccatgaca-c--cggctagtttttgtatttttagt i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1708861 165 + 3967317 tgagttggagtctcactctgtcacccaggctagagtgcagcagcgcaatctcggctcactgcaacctccacctcctgggttcaagcagttctcctgcctcagccttccgagtagctgggactacaggcatgcaccatgaca-c--tggctagtttttgtatttttagt i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4585614 166 + 163208435 tgagatagagtctcactctgtcacccaggctagagtgcagcagcgcaatctcggctcactgcaacctccacctcctgggttcaagcaattctcctgcctcagcctcccgagtagctgggactacaggcatgcaccatgacacc--cagctaatttttgtatttttagt i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5767052 166 - 180051392 tgagatggagtctcactctgtcacccaggctggagtgcagtagcgcaatctcggttcactgcagcctccacctcccaggttcaagcaattctccggcctcagcctcccaagtagctgggactacaggcatgcactatgaca-ca-cggctaatttttgtgtttttagt i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5952977 166 - 181584905 tgagatggagtctcactctgtcacccaggctggagtgcagtagcgcaatctcggttcactgcagcctccacctcccaggttcaagcaattctccggcctcagcctcccaagtagctgggactacaggcatgcactatgaca-ca-cggctaatttttgtgtttttagt i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 983637 166 - 16193990 tgagatggagtctcactctgtcacccaggctggagtgcagtagcgcaatctcggttcactgcagcctccacctcccaggttcaagcaattctccggcctcagcctcccaagtagctgggactacaggcatgcactatgaca-ca-cggctaatttttgtgtttttagt i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1804234 166 - 21434487 tgagatggagtctcactctgtcacccaggctggagtgcagtagcgcaatcttggtttactgcagcctccacctcccaggttcaagcaattctccggcctcagcctcccaagtagctgggactacaggcatgcactatgaca-ca-cggctaatttttgtatttttagt i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4766637 166 - 82825804 tgagatggaatctcactctgtcacccaggctggagtgcagtagcgcaatctcggctcattgcagcctccacctcccaggttcaagcaattctctggcctcagcctcccaagtagctgggactacaggcatgcaccatgaca-ca-cggctaatttttgtgtttttagt i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 272590 166 + 2521317 tgagatggagtctcactctgtcacccaggctggagtgcagtagcgcaatctcggtttactgcagcctccacctcccaggttcaagcaattctccggcctcagcctcccacgtagctgggactacaggcatgcactatgaca-ca-cggctaatttttgtgtttttact i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1754308 160 - 2415367 tgagatggagtctcactctgtcacccaggctggagtgcagtagcgcaatctcggctcactgcag------cctcccaggttcaagcaattctcctgcctcagcctcccaagtagctgggactacaggcacgcaccatgaca-ca-cggctaatttttgtatttttagt i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64097982 160 + 204313951 tgagacagagt----ctctgtcatccaggctggagtgcag--ggacaatctcggctcactgcaacctcctcctcctgggttcaagcaattctcctgtctcagcctcccaagtagctgggattacaggcacttgccatgaca-cc-tggctaatttttgtatttttagt i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2222773 160 + 10068113 tgagacagagt----ctctgtcatccaggctggagtgcag--gcacaatctcggctcactgcaacctcctcctcccgggttcaagcaattctcctgtctcagcctcccaagtagctgggattacaggcacgtgccatgaca-cc-tggctaatttttgtattttgagt i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 78074 160 - 709587 tgagacagagt----ctctgtcatccaggctggagtgcag--gcacaatcttggctcactgtaacctcctcctcccgggttcaagcaattatccagtctcagcctcccaagtagctggaattacgggcacgtgccatgaca-gc-tggctgatttttgtatttttagt i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1178379 160 - 2246441 tgagacagagt----ctctgtcatccaggctggagtgcag--gcacaatctcggctcactgcaacctcctcctcctgggttcaagcaattctcctgtctcagcctcccaagtagctgggattacaggcacttgccatgata-cc-tggctaatttttatattttcagt i aotNan1.NW_018501968v1 C 0 C 0 s mm10.chr13 66001922 124 - 120421639 ttagacaaggtttcactatgtagctcagcctgg-------------------------------cctcgaactcatg----------atcttcctgcctcagcctctagagt-gctagaatt-cagacatgtaggatcaca-ccttggctTGTTCTTGTTTCATAGGT i mm10.chr13 C 0 I 56 e otoGar3.GL873522 1247805 0 + 48283576 C e canFam3.chr4 37179372 0 + 88276631 C e proCoq1.NW_012152163v1 776691 290 - 940639 I e dasNov3.JH562710 266722 4 - 960158 I a score=958579.000000 s hg38.chr5_KI270795v1_alt 66503 99 + 131892 agagatggtgtttcaccatgttggccaggctggtctcaaaatcctgacctcaagtgatccacatgcctgggcctcccgaagtgctaggattacaggcgt s panTro5.chr5 5316711 99 - 181907262 agagatggtgtttcaccatgttggccaggctggtctcaaaatcctgacctcaagtgatccacatgcctgggcctcccgaagtgctaggattacaggtgt i panTro5.chr5 C 0 C 0 s panPan2.chr5 5579154 99 - 183735486 agagatggtgtttcaccatgttggccaggctggtctcaaaatcctgacctcaagtgatccacatgcctgggcctcccgaagtgctaggattacaggtgt i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1709026 99 + 3967317 agagatggtgtttcaccatgttggccaggctggtctcaaaatcctgacctcaagtgatccacatgcctgggcctcccaaagtgctaggattacaggcat i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4585780 99 + 163208435 agagatggtgtttcaccatgttggccaggctggtctcaaaatcctgacctcaagtgatccacatgcctgggcctcccaaagtgctaggattacaggtgt i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5767218 99 - 180051392 agagatggtgtttcaccgtgttggccaggctggtctcaaactcctgacctcaagtgatccacatgcctggacctcccaaaatgctaggattacacgcgt i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5953143 99 - 181584905 agagatggtgtttcaccatgttggccaggctggtctcaaactcctgacctcaagtgatccacatgcctggacctcccaaaatgctaggattacacgcgt i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 983803 99 - 16193990 agagatggtgtttcaccgtgttggccaggctggtctcaaactcctgacctcaagtgatccacatgcctggacctcccaaaatgctaggattacacgcgt i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1804400 99 - 21434487 agagatggtgtttcaccatgttggccaggctggtctcaaactcctgacctcaagtgatccacatgcctggacctcccaaaatgctaggattacatgtgt i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4766803 99 - 82825804 agagatggtgtttcaccatgttggccaggctggtctcaaaattctgacctcaagtgatccacatgcctgggcctcccaaaatgctaggattacacgcgt i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 272756 99 + 2521317 agagatggtgtttcaccacgttggccaggctggtctcaaactcctgacctcaagtgatccacatgcctggacctcccaaaatgctaggattacacacgt i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1754468 99 - 2415367 agagatggtgtttcaccatgttgtccaggctagtctcaaaatcctgacctcaagtgatccacatgcctgggcctcccaaaatgctaggattacacatgt i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64098142 99 + 204313951 agtggtggggttttaccatgttggccaggctggtctcaaaatcctgacctcaagtaatccacttgccttggcctcccaaagtgctaggattacaggtgt i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2222933 98 + 10068113 agtggcggggtttcactatgttgtccaggctggtctcgaaatcctga-ctcatgtaatccacttgccttggcctcccaaagtgctaggattacagacgt i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 78234 98 - 709587 agtggcagggtttcaccatgttggctaggc-agtcttgaaatcctgacctcaagtaatccacttgccttggcctcccaaagtgctaggattataggcct i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1178539 99 - 2246441 agtggtggggtttcaccatgttggccaggctgggcttgaaatcctgacctcaagtaatccacttgccttggcctcccaaagtgctaggattacaggtgt i aotNan1.NW_018501968v1 C 0 C 0 e mm10.chr13 66002046 56 - 120421639 I e otoGar3.GL873522 1247805 0 + 48283576 C e canFam3.chr4 37179372 0 + 88276631 C e proCoq1.NW_012152163v1 776691 290 - 940639 I e dasNov3.JH562710 266722 4 - 960158 I a score=145194.000000 s hg38.chr5_KI270795v1_alt 66602 15 + 131892 gagccactgcactgg- s panTro5.chr5 5316810 15 - 181907262 gagccactgcactgg- i panTro5.chr5 C 0 C 0 s panPan2.chr5 5579253 15 - 183735486 gagccactgcactgg- i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1709125 15 + 3967317 gagccactgcactgg- i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4585879 15 + 163208435 gagccactgtgctgg- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5767317 15 - 180051392 gagccactgtgctgg- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5953242 15 - 181584905 gagccactgtgctgg- i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 983902 15 - 16193990 gagccactgtgctgg- i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1804499 15 - 21434487 gagccactgtgccgg- i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4766902 15 - 82825804 gagccactgtgccgg- i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 272855 15 + 2521317 gagccactgtgccgg- i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1754567 15 - 2415367 gagccactgtgccgg- i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64098241 15 + 204313951 gagccactgtgctgg- i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2223031 15 + 10068113 gagccactgtgccgg- i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 78332 15 - 709587 gagccactgcgctgg- i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1178638 15 - 2246441 gagccactgcactgg- i aotNan1.NW_018501968v1 C 0 C 0 s mm10.chr13 66002102 15 - 120421639 -GGGAAATGGCCGGGA i mm10.chr13 I 56 C 0 e otoGar3.GL873522 1247805 0 + 48283576 C e canFam3.chr4 37179372 0 + 88276631 C e proCoq1.NW_012152163v1 776691 290 - 940639 I e dasNov3.JH562710 266722 4 - 960158 I a score=151765.000000 s hg38.chr5_KI270795v1_alt 66617 12 + 131892 ctcaagtctacc s panTro5.chr5 5316825 12 - 181907262 ctcaagtctacc i panTro5.chr5 C 0 C 0 s panPan2.chr5 5579268 12 - 183735486 ctcaagtctacc i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1709140 12 + 3967317 ctcaagtctacc i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4585894 12 + 163208435 ctcaagtctacc i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5767332 12 - 180051392 cccaagtctacc i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5953257 12 - 181584905 cccaagtctacc i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 983917 12 - 16193990 cccaggtctacc i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1804514 12 - 21434487 ccCAAGTCTACC i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4766917 12 - 82825804 cccaagtctacc i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 272870 12 + 2521317 ccCAAGTCTACC i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1754582 12 - 2415367 ccCAAGTCTACC i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64098256 12 + 204313951 ccCAAGTCTACC i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2223046 12 + 10068113 cccaagtctacc i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 78347 12 - 709587 cccaagtctacc i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1178653 12 - 2246441 cccaagtctacc i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1247805 12 + 48283576 cccagatctacc i otoGar3.GL873522 C 0 C 0 s mm10.chr13 66002117 12 - 120421639 CCCAGATTTATT i mm10.chr13 C 0 C 0 e canFam3.chr4 37179372 0 + 88276631 C e proCoq1.NW_012152163v1 776691 290 - 940639 I e dasNov3.JH562710 266722 4 - 960158 I a score=37955.000000 s hg38.chr5_KI270795v1_alt 66629 3 + 131892 agt s panTro5.chr5 5316837 3 - 181907262 agc i panTro5.chr5 C 0 C 0 s panPan2.chr5 5579280 3 - 183735486 agt i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1709152 3 + 3967317 agt i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4585906 3 + 163208435 agt i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5767344 3 - 180051392 agt i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5953269 3 - 181584905 agt i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 983929 3 - 16193990 agt i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1804526 3 - 21434487 AGT i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4766929 3 - 82825804 agt i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 272882 3 + 2521317 AGT i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1754594 3 - 2415367 AGT i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64098268 3 + 204313951 AGT i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2223058 3 + 10068113 agt i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 78359 3 - 709587 agt i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1178665 3 - 2246441 agt i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1247817 3 + 48283576 aat i otoGar3.GL873522 C 0 C 0 s mm10.chr13 66002129 3 - 120421639 ATT i mm10.chr13 C 0 C 0 s dasNov3.JH562710 266726 3 - 960158 aat i dasNov3.JH562710 I 4 C 0 e canFam3.chr4 37179372 0 + 88276631 C e proCoq1.NW_012152163v1 776691 290 - 940639 I a score=933221.000000 s hg38.chr5_KI270795v1_alt 66632 83 + 131892 tcttaacttgtgctttcctCCAGACC-TACCTTCGTACGCTGGGACAGTATCCATGGGTCTCACTTTTCCTGAAGC-GGGACAGT s panTro5.chr5 5316840 83 - 181907262 tcttAACTTGTGCTTTCCTCCAGACC-TACCTTCGTACCCTGGGACAGTATCCATGGGTCTCACTTTTCCTGAAGC-GGGACAGT i panTro5.chr5 C 0 C 0 s panPan2.chr5 5579283 83 - 183735486 tcttaacttgtgctttcctCCAGACC-CACCTTCGTACCCTGGGACAGTATCCATGCGTCTCACTTTTCCTGAAGC-GGGACAGT i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1709155 83 + 3967317 tcttaacttgtgctTTCCTCCAGACC-TACCTTCGTACCCTGGGACAGTATCCATGGGTCTCACTTTTCCTGAAGC-GGGACAGT i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4585909 83 + 163208435 tcttaacttgtgctTTCCTCCAGACC-TACCTTTGCACCCTGGGGCAGTATCCATGGGTCTCATTTTTCCTGAAGC-GGGACAGT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5767347 84 - 180051392 tcttaacttatgctTTCCTCCAGACC-TGCCTTCTCACCCTGGGGCAGTATCCACGGGTCTTATTTTTCCTGAAGCGGGGACAGT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5953272 84 - 181584905 tcttaacttatgctTTCCTCCAGACC-TGCCTTCTCACCCTGGGACAGTATCCACGGGTCTTATTTTTCCTGAAGCGGGGACAGT i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 983932 84 - 16193990 tcttaacttatgctttcctCCAGACC-TGCCTTCTCACCCTGGGACAGTATCCACGGGTCTTATTTTTCCTGAAGCGGGGACAGT i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1804529 84 - 21434487 TCTTAACTTATGCTTTCCTCCAGACC-TGCCTTCTCACCCTGGGACAGTATCCACGGGTCTTATTTTTCCTGAAGCGGGGACAGT i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4766932 84 - 82825804 tcttaacttgtgctTTCCTCCAGACC-TGCCTTCTCACCCTGGGACAGTATCCACGGGTCTTATTTTTCCTGAAGCGGGGACAGT i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 272885 84 + 2521317 TCTTAACTTATGCTTTCCTCCAGACC-TGCCTTCTCACCCTGGGACAGTATCCACGGGTCTTATTTTTCCTGAAGCGGGGACAGT i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1754597 84 - 2415367 TCTTAACTTATGCTTTCCTCCAGACC-TGCCTTCTCAGCCTGGGACAGTATCCACGGGTCTTATTTTTCCTGAAGCGGGGACAGT i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64098271 84 + 204313951 TCTTAACCTGTGCTTTCCTCCAGACC-CTGCTTTATACCCTGGGACAGTATCCACAGGTCTCAGTTTTCCTGAAGTGGGGACAGT i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2223061 84 + 10068113 tcttagcctgtgctttcctccagacc-ctgctTTATACCCTGGGACAGTATCCGTGGGTCTCAGTTTTCCTGAAGTGGGGACAGT i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 78362 84 - 709587 tcttaacctgtgctttcctTCAGGCC-CTGCTTTATACCCTGGGACAGTATCCATGGGTCTCAGTTTTTCTGAAGTGGGGACAGT i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1178668 84 - 2246441 tcttaacctgtgctttcctccagacc-ctgcttTAAACCCTGGAACAGTATCCACAGGTCTCAGTTTTCCTGAAGTGGGGACAGT i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1247820 54 + 48283576 tcccaacctgtgctttcCTCGGG----------------------------CTGCGTGTCTCATTTTTCCTGAACTGGAGAC--- i otoGar3.GL873522 C 0 C 0 s mm10.chr13 66002132 77 - 120421639 TTCTGTCCTGTGCTTTCCTCTGGCCC-ATCTTTGCCCTTTGGGGGCAACAGCTAAGTGTCTCATTTCTCC-------CGGGCAGT i mm10.chr13 C 0 C 0 s canFam3.chr4 37179372 67 + 88276631 tcctgacttgtg---ttctccagccc-acccctat------------gcaccCATGGGTCTCATTCCTCCTGAACTGGGGACA-- i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 266729 85 - 960158 tcttgccctgtggtatactctagcccacccctttgcACCCTGGGACAGTGTCCACATGTCTCGTTTCTCCTGAACTGGGCACAGT i dasNov3.JH562710 C 0 C 0 e proCoq1.NW_012152163v1 776691 290 - 940639 I a score=4672385.000000 s hg38.chr5_KI270795v1_alt 66715 325 + 131892 TAAGTGGCTGAGGAGGGAGTGGCCCT---CTAGTTTCTGCCCCATACCTAGCTGAAGGCTTCAGGATA-----------AGGAGAATA-------------GTCACTGGTGAGCAGAGGAAACCTATTTCTGCTCTGGAAATGG--CTCTTCTCTCCCTTTCTCTTCCCCCA-----------------------CCTCCCCCTGCTACCC-CCCAGAGTTCTGTACCAATTAATCAGCAGACAATGGAAGCTCCAGCTGGGACCAAGTGGGCTGGACTCATTAGTGCAGAATGACATTAATATCAAAAA-----TCTTCTGAGACAAATGCAATGATTCAGGGCAGACGCCTATGGAGGGCTGGCTCAGAAGCTGGTGT-GGG s panTro5.chr5 5316923 325 - 181907262 TAAGTGGCTGAGGAGGGAGTGGCCCT---CTAGTTTCTGCCCCATACCTAGCTGAAGGCTTCAGGATA-----------AGGAGAATA-------------ATCACTGGTGAGCAGAGGAAACCTATTTCTGCTCTGGAAATGG--CTCTTCTCTCCCTTTCTCTTCCCCCA-----------------------CCTCCCCTTGCTACCC-CCCAGAGTTCTGTACCAATTAATCAGCAGACAATGGAAGCTCCAGCTGGGACCAAGTGGGCTGGACTCATTAGTGCAGAATGACATTAATATCAAAAA-----TCTTTTGAGACAAATGCAATGATTCAGGGCAGGCGCCTATGGAGGGCTGGCTCAGAAGCTGGTGT-GGG i panTro5.chr5 C 0 C 0 s panPan2.chr5 5579366 325 - 183735486 TAAGTGGCTGAGGAGGGAGTGGCCCT---CTAGTTTCTGCCCCATACCTAGCTGAAGGCTTCAGGATA-----------AGGAGAATA-------------ATCACTGGTGAGCAGAGGAAACCTATTTCTGCTCTGGAAATGG--CTCTTCTCTCCCTTTCTCTTCCCCCA-----------------------CCTCCCCTTGCTACCC-CCCAGAGTTCTGTACCAATTAATCAGCAGACAATGGAAGCTCCAGCTGGGACCAAGTGGGCTGGACTCATTAGTGCAGAATGACATTAATATCAAAAA-----TCTTTTGAGACAAATGCAATGATTCAGGGCAGACGCCTATGGAGGGCTGGCTCAGAAGCTGGTGT-GGG i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1709238 324 + 3967317 TAAGTGGCTGAGGAGGGAGTGGCCCT---CTAGTTTCTGCCCCATACCTAGCTGAAGGCTTC-GGATA-----------AGGAGAATA-------------ATCACTGGTGAGCAGAGGAAACCTATTTCTGCTCTGGAAATGG--CTCTTCTCTCCCTTTCTCTTCCCCCA-----------------------CCTCCCCTTGCTACCC-CCCAGAGTTCTGTACCAATTAATCAGCAGACAATGGAAGCTCCAGCTGGGACCAAGTGGGCTGGACTCATTAGTGCAGAATGACATTAATATCAAAAA-----TCTTTTGAGACAAATGCAATGCTTCAGGGCAGACGCCTATGGAGGGCTGGCTCAGAAGCTGGTGT-GGG i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4585992 347 + 163208435 TAAGTGGCTGAGGAGGGAGTGGCCCT---CTAGTTTCTGCCCCATACCTAGCTGAAGGCTTCAGGATA-----------AGGGGAATA-------------ATCACTGGTGAACAGAGGAAACCTATTTCTGCTCTGGAAATGA--CTCTTCTCTCCCTTTCTCTTCccccacctctttctt-cccctcccctcccctcccctTGCTACCC-CCCAGAGTTCTGTACCAATTAATCAGCAGACAATGGAAGCTCCAGCTGGGACCAAGTGGGCTGGACTCATTAGTGCAGAATGACATTAATATCAAAAA-----TCTTTTGAGACAAATGCAATGATTCAGGGCAGATGCCTATGGAGGGCTGGCTCAGAAGCTGGTGT-GGG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5767431 338 - 180051392 TAAGTGGCTGGGGAGAGAGTGGCCCT---CTGGTTTCTGCTCCATACCTAGCTGAAGGCTTCAGGATA-----------AGGAGAAGA-------------ATCGCTGGTGAGCAGAGGAAACCTATTTCTGCTCTGGAAATGG--CTCTTCTCTCCCTTTCTCTTCCCCCAGCTCTTTCTT-CCCTCC------CCTCCCCTTGCTACCC-CCCAGAGCTCCGTACCAATTAATCAGCAGACAATGGAGGCTCCAGCTGGGA-CAAGTGGGCTCGACTCATTAGTACAGAATGACATTAATATC-AGAG-----TCTTTTGAGACAAGTGC-ATGATTCAGGGCAGACGCCTATGGAGGGCTGGCTCTGAAGCTGGTGT-GGG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5953356 338 - 181584905 TAAGTGGCTGGGGAGAGAGTGGCCCT---CTGGTTTCTGCTCCATACCTAGCTGAAGGCTTCAGGATA-----------AGGAGAAGA-------------ATCGCTGGTGAGCAGAGGAAACCTATTTCTGCTCTGGAAATGG--CTCTTCTCTCCCTTTCTCTTCCCCCAGCTCTTTCTT-CCCTCC------CCTCCCCTTCCTACCC-CCCAGAGCTCCGTACCAATTAATCAGCAGACAATGGAGGCTCCAGCTGGGA-CAAGTGGGCTGGACTCATTAGTACAGAATGACATTAATATT-AGAG-----TCTTTTGAGACAAGTGC-ATGATTCAGGGCAGATGCCTATGGAGGGCTGGCTCTGAAGCTGGTGT-GGG i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 984016 338 - 16193990 TAAGTGGCTGGGGAGAGAGTGGCCCT---CTGGTTTCTGCTCCATACCTAGCTGAAGGCTTCAGGATA-----------AGGAGAAGA-------------ATCGCTGGTGAGCAGAGGAAACCTATTTCTGCTCTGGAAATGG--CTCTTCTCTCCCTTTCTCTTCCCCCAGCTCTTTCTT-CCCTCC------CCTCCCCTTGCTACCC-CCCAGAGCTCCGTACCAATTAATCAGCAGACAATGGAGGCTCCAGCTGGGA-CAAGTGGGCTGGACTCATTAGTACAGAATGACATTAATATC-AGAG-----TCTTTTGAGACAAGTGC-ATGATTCAGGGCAGACGCCTATGGAGGGCTGGCTCTGAAGCTGGTGT-GGG i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1804613 338 - 21434487 TAAGTGGCTGGGGAGAGAGTGGCCCT---CTGGTTTCTGCTCCATACCTAGCTGAAGGCTTCAGGATA-----------AGGAGAAGA-------------ATCGCTGGTGAGCAGAGGAAACCTATTTCTGCTCTGGAAATGG--CTCTTCTctccctttctcttcccccacctctttctt-ccctcc------cctcccctTGCTACCC-CCCAGAGCTCCGTACCAATTAATCAGCAGACAATGGAGGCTCCAGCTGGGA-CAAGTGGGCTGGACTCATTAGTACAGAATGACATTAATATC-AGAG-----TCTTTTGAGACAAATGC-ATGATTCAGGGCAGACGCCTATGGAGGGCTGGCTCTGAAGCTGGTGT-GGG i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4767016 337 - 82825804 TAAGTGGCTGGGGAGAGAGTGGCCGT---CTGGTTTCTGCTCCATACCTAGCTGAAGGCCTCAGGATA-----------AGGAGAAGA-------------ATCGCTGGTGAGCAGAGGAAACCTATTTCTGCTCTGGAAATGG--CTCTTCTCTTCTTTTCTCTtccccccccac-ttctt-ccctcc------cctcccctTGCTACCC-CCCAGAGTTCCGTACCAATTAATCAGCAGACAATGGAGGCTCCAGCTGGGA-CAAGTGGGCTGGACTCATTAGTACAGAATGACATTAATATC-AAAG-----TCTTTTGAGACAAATGC-ATGATTCAGGGCAGACGCCTATAGAGGGCTGGCTATGAAGCTGGTGT-GGG i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 272969 338 + 2521317 TAAGTGGCTGGGGAGAGAGTGGCCCT---CTGGTTTCTGCTCCATACCTAGCTGAAGGCTTCAGGATA-----------AGGAGAAGA-------------ATCGCTGGTGAGCAGAGGAAACCTATTTCTGCTCTGGAAATGG--CTCTTCTctccctttctcttccctcacctctttttt-ccctcc------cctcccctTGCTACCC-CCCAGAGCTCCGTACCAATTAATCAGCAGACAATGGAGGCTCCAGCTGGGA-CAAGTGGGCTGAACTCATTAGTACAGAATGACATTAATATC-AGAG-----TCTTTTGAGACAAATGC-ATGATTCAGGGCAGACGCCTATGGAGGGCTGGCTCTGAAGCTGGTGT-GGG i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1754681 338 - 2415367 TAAGTGGCTGGGGAGAGAGTGGCCCT---CTGGTTTCTGCTCCATACCTAGCTGAAGGCTTCAGGATA-----------AGGAGAAGA-------------ATCACCGGTGAGCGGAGGAAACCTATTTCTGCTCTGGAAATAG--ctcttctctccctttctcttcccccacctctttctt-cccttc------cctccccttGCTACCC-CCCAGAGTTCCGTACCAATTAATCAGCAGACAATGGAGGCTCCAGCTGGGA-CAAGTGGGCTGAACTCATTAGTACAGAATGACATTAATATC-AAAG-----TCTTTTGAGACAAATGC-ATGATTCAGGGCAGACGCCTATGGAGGACTGGCTCTGAAGCTGGTGT-GGG i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64098355 342 + 204313951 TAAGTGACTGAGGAGGGTGTGGCCCT---CTAGTTTCTGCTCCATAAATAGCTGAAGGCTTCCGGTTA-----------AGGAGAATA-------------ATCACTGGTGAGCAGAGGAAACCTATTTCTGCTCTGGAAATGG--ctcttctctctctttctctttccccacctctttcttcccctcc------cctccccttgctcccc-cccAGAGATCTGTACCAATTAATCAGCAGAAAATGGAGGCTCCAGCTGGGACCAAGTGGGCTGGACTCATTAGTGCAGAATGACATTAATATCAAAAA-----TCTTTTGAGACAAGTGAAACGATTCAGGGCAGATGCCTATGGAGGACTGGCTCCAAAGCTGGTGT-GGG i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2223145 341 + 10068113 TAAGTGGCTGAGGAAGGTGTGGCCCT---CTAGTATCTGCCCCATAACTAGCTGAAGGCTT-CAGTTA-----------AGGATAATA-------------ATCACTGGTGAGCAGAGGAAACCTATTTCTGCTCTGGAAATGG--cccttctctccctttctcttcccccacctgtttcttcccctcc------cctcgccttgctcccc-tccAGAGTTCTGTACCAATTAATCAGCAGAAAATGGAGGCTCCAGCTGGGACCAAGTGGGCTGGACTCATTAGTGCAGAATGACATTAACATCAAAAA-----TCTTTTGAGACAAGTGAAATGATTCAGGGCAAATGCCTATGGAGGACTGGCTCCGAAGCTGGTGT-GGG i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 78446 342 - 709587 TAAGTGGCTGAGGAGGGTGTGGCCCT---GTAGTTTCTGCCCCATAACTAGCTGAAGGCTTCTGGTTA-----------AGCAGAATA-------------ATCACTGGTGAGCAGAGGAAACCTATTTCTGCTCTGGAAATGG--CTCTTCTCTCCCTTTCTCTTCccccacctctttcttcccctcc------cctccccttgctcccc-cccAGAGTTCTGTACCAATTAATCAGCAGAAAATGGAGGCTCCAGCTGGGACCGAGTGGGCTGGACTCATTAGTGCAGAATGACATTAATATCAAAAA-----TCTTTTGAGACAAGTGAAATGATTCAGGGCAGATGCCCATGGAGGACTGGCTCCGAAGCTGGTGT-GGG i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1178752 343 - 2246441 TAAGTGACTGAGGAGGGTGTGGCCCT---CTGGTTTCTGCCCCATAACTAGCTGAAGGCTTCCGGTTA-----------GGGAGAATA-------------ATCACTGGTGAGCAGAGGAAACCTATTTCTGCTCTGGAAATGG--CTCTTCTCTCCGTTTCTCTTCccccacctctttcttcccctcc------cctccccttgctcccc-CCAAGAGTTCTGTACCAATTAATCAGCAGAAAATGGAGGCTCCAGCTGGGACCAAGTGGACTGGACTCATTAGTGCAGAATGACATTAATATCAAAAA-----TCTTTTGAGACAAGTGAAATGATTCAGGGCAGATGCCTATGGAGGACTGGCTCCGAAGCTGGTGTGGGG i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 776981 339 - 940639 TAAGGGGCTGAGGAGGGAGTGAACTT---CTAGTTTCTGCTTCATAATTAGCCAAGGGCTTGAGGACA------------GGGGAA-A-------------TTCACTGGTGAGTAGAGGAAACCTATTTCTGATCTGGAAACCACTTTTCTCTCTCCCTTTTTCTtcccccaccttttcc---ccctcc------catcccctgtcctcct-cccGGAGCTCTGTACCAATTAATCGACAGGCGTCAGAGGCTCCAGCTGGGACCAAGTGGGCTGGATTCATTAGTGCGGAATGACATTAATATCAAAAA-----ATGTTTGTGACAAATGCAATAATTCAGGGCAGGAGCCGATGTAGGGCTGGCTCAAAAACTGGTGT-GGG i proCoq1.NW_012152163v1 I 290 I 473 s otoGar3.GL873522 1247874 322 + 48283576 TAAGTGGCTAAGGAGGCAGTAGCCGT---CTAGTTTCTGCTTCTTAAGAAGTCAAAGGC-TGAGGACA-----------GGGGGAA-A-------------TTCACTGGTGAGCAGGGCAAACCTATTTCTGCTCTGGAAACCA--TTCTTCTCTCCCTCTGTCTGCCCC--TCATTTCC---TTCTCC------CCTCCCCTCACGTCC--CTGAGAGCTCTGTACCAATTAATCAGCAGGCATCGGAGTCTCCAGCTGGGACCAAGTGGGCTGGACTCATTAGTGCAGAATGACATTAATATCAAAAA-----ATGTGCTCAGGAATCACAGTAATTCAGGGCAGGCCCCCACGTAGG------------ACTGGTAT-GGG i otoGar3.GL873522 C 0 C 0 s mm10.chr13 66002209 353 - 120421639 -AAGTGACTGAAGAGGG-GTGTTTTTTCCCAAATGTCTGTTCCATAACCAGCTTTAGGCTTGAGGACC-----------GGTGGGGTAGGGGTGTGTGTGGATCGCTGGTGAACAGAGGAAACCTATTTGAG-TCTACAAATGG---TCCTTTCTTCCTTTCTGT--CTGCATCTCTTCCACCCCCCCC------CCTCGTCTTGCCTCC--CAGAGAGCTCCACGCTAATTAATCAGTAGACATTAGCTGTTCCAGCTGGGACCGAGTGGGGTAGACTCATTAGTACAGAATGACATTAATAT--AACATTTTTTTTTTTGAGACAAATCA-ATGATTCAGGGTATGTGCCTACGGAGGGCTGCCTGCAGAACTGGCAC-AGG i mm10.chr13 C 0 C 0 s canFam3.chr4 37179439 332 + 88276631 -AAGCTGCTAAGGATGGGGTGACCTT---CTAGTTTCTGCCCCATAACCAGCTGAAAACTTAAGGATGGAGTGGGAGTGAGGGGAGGA-------------ATCACTGGTAAGCCAAGGAAAAGTGTTTCTATGCTGGAAACCA--CTCTTCTTTGCCTTCC---------------------ACCCCG------ACTCCCCTTGCCTCCCTCCAAAAGCTCTGCACCAATTAATCAGCCGATCTTCTAGGCTCCAGCTGGGACCAAGTAGGCTGGACTCATTAGTGCAGAATGACATTAATATCCAAAA-----ACTTGTGAGACAAGTGCAGTGATTCAGGCTAGGTGCCTGTGTAGGGATAGCTCTGAAGCTGGTGT-GGG i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 266814 319 - 960158 -AAGTGGCTAAGAAGGGAGTAGCCTT---CTAGTCTCAGCCACATCATCAACTGAAGGTTTGAGGACA-----------GGGGAAAAA-------------AACATTAGTGAGCAGAGGAAACCTATTTCTACTCCAGAAACTG--CTTTTCTTTCCCTTCCTG-------------------CTCTCC------CCACTTCTTCCTTTC--CCCAAAGCTCTGTACCAATTAATCAGCAGACATCAGAGGCTCCAGCTGGGACCAAGTGGGCTGGACCCATTAGTGCAGAATGACAAT-ATATT-AAAA-----AAAAAAAAGACACATGCAATGATTCGGGGCAGGCGTCCTTGTAGGGCTGGCGCAGCAGTCCGTGT-GGG i dasNov3.JH562710 C 0 C 0 a score=673183.000000 s hg38.chr5_KI270795v1_alt 67040 70 + 131892 TGATGGTACCGTGGTCCAAG---ACAGAG--AGAGCCGTGCATAT-GT--------------------------------------------------------------------GGGTGGACAACCAGGCCGGGTCCCCGGG s panTro5.chr5 5317248 70 - 181907262 TGATGGTACCGCGGTCCAAG---ACAGAG--AGAACTGTGCATAT-GT--------------------------------------------------------------------GGGTGGACAACCAGGCCGGGTCCCTGGG i panTro5.chr5 C 0 C 0 s panPan2.chr5 5579691 70 - 183735486 TGATGGTACCGCGGTCCAAG---ACAGAG--AGAACCGTGCATAT-GT--------------------------------------------------------------------GGGTGGACAACCAGGCCGGGTCCCCGGG i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1709562 69 + 3967317 TGATGGTACCACGGTCCAAG---ACAGAG--AGAAC-GTGCATAT-GT--------------------------------------------------------------------GGGTGGACAACCAGGCCGGGTCCCCGGG i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4586339 70 + 163208435 TAATGGTACCGCGGTCCAAG---ACAGAG--AGAACTGTGCATAC-GT--------------------------------------------------------------------GGGTGGACAACCAGGCCGGGTCCCTGGG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5767769 70 - 180051392 AAATGGAACCATGGTCAAAG---ACAGAG--AGAACCGTGTATAC-GT--------------------------------------------------------------------GGATGGACAACCAGGCCGGGTCCCCGGG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5953694 70 - 181584905 AAATGGAACCACGGTCAAAG---ACAGAG--AGAACCGTGTATAC-GT--------------------------------------------------------------------GGATGGACAACCAGGCCGGGTCCCCGGG i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 984354 70 - 16193990 AAATGGAACCACGGTCAACG---ACAGAG--AGAACCGTGTATAC-GT--------------------------------------------------------------------GGATGGACAACCAGGCCGGGTCCCCGGG i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1804951 70 - 21434487 AAATGGAACCACGGTCAAAG---ACAGAG--AGAACCGTGTATAC-GT--------------------------------------------------------------------GGATGGACAACCAGGCCGGGTCCCCGGG i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4767353 70 - 82825804 TAATGGAACCATGGTCAAAG---ACAGAG--AGAACCGTGTATAC-GT--------------------------------------------------------------------GGGTGGACAACCAGGCCGGGTCCCCGGG i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 273307 70 + 2521317 AAATGGAACCACGGTCAAAG---ACAGAG--AGAACCGTGTATAC-GT--------------------------------------------------------------------GGATGGACAACCAGGCCGGGTCCCCGGG i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1755019 70 - 2415367 TAATGGAACCACGGTCAAAG---ACAGAG--AGAACCGTGCATAC-GT--------------------------------------------------------------------GGGTGGACAACCAGGCCGGGTCCCCGGG i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64098697 72 + 204313951 CAACGGAACCACTATCAAAG---ACAGAGTTACAACAGTACATAC-AT--------------------------------------------------------------------GGGTGGACAATAGGGTCAGGTCCCCAGG i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2223486 71 + 10068113 CAATGGAACCTCGATCAAAG---ACAG-GTTACAACAGTGCATAC-GT--------------------------------------------------------------------GGGTGGACAGCAGGGCCGGGGCCCCAGG i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 78788 71 - 709587 CAATGGAACCGAGATCAAAG---ACAG-GTTACAACAGTGCATAT-GT--------------------------------------------------------------------GGGTGGACAACAGGGCCGGGGCCCCAGG i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1179095 72 - 2246441 CAATGGAACCGTGATCAAAG---ACAGAGTTACAACAGTGCATAC-AT--------------------------------------------------------------------GGGTGGACAACAGGGTCGGGTCCCCAGG i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1248196 139 + 48283576 -CAAAGGAGCATAGTAAGAG---GCAGAGAGGGAGCCATGCAGAT-GTTGAGAGGACCAGGTCTCCACATGCCCAGAGGAGAGTTGCAGGCAGAGCAACtcttttttttttttttgagatggagcctcaagctgtctccctggg i otoGar3.GL873522 C 0 I 232 s mm10.chr13 66002562 74 - 120421639 CAAAGAAATGGGGGTTAAGATGCAGAGAG--AAAACTGTCAATACAGA--------------------------------------------------------------------AGGAGGGCCAGCAGGCCCGGTCTCCAAG i mm10.chr13 C 0 C 0 s canFam3.chr4 37179771 75 + 88276631 CAAAGGAACTGTGGTGAGAG---GCAGAGAGGGAACAATGCTGAT-GT-----------GGT------------------------------------------------------GGGAGGAGAACCAGGCCTGGTCTCGAGG i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 267133 70 - 960158 CAAAGGAACCATGGTCAGAA---GCAGAGAGGAAACAGTGCAGAG-----------------------------------------------------------------------AGGTGGAAAACCAGGCTGGGTCCCCAAG i dasNov3.JH562710 C 0 C 0 e proCoq1.NW_012152163v1 777320 473 - 940639 I a score=247849.000000 s hg38.chr5_KI270795v1_alt 67110 24 + 131892 ATGCCTGAGGGGAAGAGGGG-GCAA s panTro5.chr5 5317318 24 - 181907262 ATGCCTGAGGGGAAGAGGGG-GCAA i panTro5.chr5 C 0 C 0 s panPan2.chr5 5579761 24 - 183735486 ATGCCTGAGGGGAAGAGGGG-GCAA i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1709631 24 + 3967317 ATGCCTGAGGGGAAGAGGGG-GCAA i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4586409 24 + 163208435 ATGCCTGAGGGGAAGAGGGG-GCAA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5767839 24 - 180051392 ATTCCTGAGGGGAAGAAGGG-GCAA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5953764 24 - 181584905 ATGCCTGAGGGGAAGAAGGG-GCAA i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 984424 24 - 16193990 ATGCCTGAGGGGAAGAAGGG-GCAA i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1805021 24 - 21434487 TTGCCTGAGGGGAAGAAGGG-GCAA i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4767423 24 - 82825804 ATGCCCGAGGGGAAGAGGGG-GCAA i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 273377 24 + 2521317 ATGCCTGAGGGGAAGAAGGG-GCAA i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1755089 24 - 2415367 ATGCCTGAGGGGAAGAGGGG-GCAA i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64098769 24 + 204313951 ATGCCCGAGGGGAAGAGCAG-GCAA i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2223557 18 + 10068113 ATGCCCGAGGGA------AT-CCAA i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 78859 24 - 709587 ATGCCCAAGGGGAAGAGCGG-GCAA i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1179167 24 - 2246441 ATGCCCGAGGGGAAGAGCGG-GCAA i aotNan1.NW_018501968v1 C 0 C 0 s mm10.chr13 66002636 21 - 120421639 GTGACT---GGACAGAGAGG-GCCA i mm10.chr13 C 0 I 1 s canFam3.chr4 37179846 25 + 88276631 ATGCCCAGTGGGAAGGGAGGAGCAA i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 267203 24 - 960158 ATGCTGGTATGAAGAGAAGG-GCAA i dasNov3.JH562710 C 0 C 0 e otoGar3.GL873522 1248335 232 + 48283576 I e proCoq1.NW_012152163v1 777320 473 - 940639 I a score=664424.000000 s hg38.chr5_KI270795v1_alt 67134 45 + 131892 AGCAGCTC-TGCCTTGGGCAGGGTCCCTGTCCTCTTGTGCAACCTG s panTro5.chr5 5317342 45 - 181907262 AGCAGCTC-TGCCTTGGGCAGGGTCCCTGTCCTCTTGTGCAGCCTG i panTro5.chr5 C 0 C 0 s panPan2.chr5 5579785 45 - 183735486 AGCAGCTC-TGCCTTGGGCAGGGTCCCTGTCCTCTTGTGCAGCCTG i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1709655 45 + 3967317 AGCAGCTC-TGCCTTGGGCAGGGTCCCTGTCCTCTTGTGCAGCCTG i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4586433 45 + 163208435 AGCAGCTC-TGCCTTGGGCAGGGTCCCTGTCCTCTTGTGCAGCCTG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5767863 45 - 180051392 AGCAGCTC-TGCTTTGGGCAGGGTCCCTGTCCTCTTGTGCAGCCTG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5953788 45 - 181584905 AGCAGCTC-TGCTTTGGGCAGGGTCCCTGTCCTCTTGTGCAGCCTG i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 984448 45 - 16193990 AGCAGCTC-TGCTTTGGGCAGGGTCCCTGTCCTCTTGTGCAGCCTG i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1805045 45 - 21434487 AGCAGCTC-TGCCTTGGGCAGGGTCCCTGTCCTCTTGTGCAGCCTG i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4767447 45 - 82825804 AGCAGCTC-TGCCTTGGGCAGGGTCCCTGTCCTCTTGTGCAGCCTG i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 273401 45 + 2521317 AGCAGCTC-TGCCTTGGGCAGGGTCCCTGTCCTCTTGTGCAGCCTG i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1755113 45 - 2415367 AGCAGCTC-TGCCTTGGGCAGGGTCCCTGTCCTCTTGTGCAGCCTG i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64098793 45 + 204313951 AGCAGCTC-TGCCTTGGGCAGGGTCCCTGTCCTCTTGTGCAGCCTG i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2223575 45 + 10068113 AGCGGCTC-TGCCTTGGGCAGAGTCCCTGTCCTCTTGTGCAGCCTG i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 78883 45 - 709587 AGCAGCTC-TGCCTTGGGCAGGGTCCCTGTCTTCTTGTGCAGCCTG i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1179191 45 - 2246441 AGCAGCTC-TGCCTTGGGCAGGGTCCCTGTCCTCTTGTGCAGCCTG i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1248567 45 + 48283576 AGCAACTCTTAAGTTGGGCAGTGTCCCTGTCCTCTTGTG-AGTCTG i otoGar3.GL873522 I 232 C 0 s mm10.chr13 66002658 45 - 120421639 AGCAACTG-TTGCTTAGGCAGCGATTTCGCCCGCCTGTGCTAACTG i mm10.chr13 I 1 I 777 s canFam3.chr4 37179871 43 + 88276631 AGTAGCTC-TAACTTGGGCAGAGT--CTGTCCTCTTGTGCAGTCTG i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 267227 45 - 960158 GGCAATTC-TAACTTGGGCAGTTGCCCTGTTCTCTTACGCAGTCTG i dasNov3.JH562710 C 0 C 0 e proCoq1.NW_012152163v1 777320 473 - 940639 I a score=183321.000000 s hg38.chr5_KI270795v1_alt 67179 13 + 131892 ACTTCTCCCTCCT s panTro5.chr5 5317387 13 - 181907262 ACTTCTCCCTCCT i panTro5.chr5 C 0 C 0 s panPan2.chr5 5579830 13 - 183735486 ACTTCTCCCTCCT i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1709700 13 + 3967317 ACTTCTCCCTCCT i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4586478 13 + 163208435 ACTGCTCCCTCCT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5767908 13 - 180051392 ACTTCTCCCTCCT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5953833 13 - 181584905 ACTTCTCCCTCCT i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 984493 13 - 16193990 ACTTCTCCCTCCT i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1805090 13 - 21434487 ACTTCTCCCTCCT i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4767492 13 - 82825804 ACTTCTCCCTCCT i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 273446 13 + 2521317 ACTTCTCCCTCCT i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1755158 13 - 2415367 ACTTCTCCCTCCT i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64098838 13 + 204313951 ACTTCTCTCTCCT i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2223620 13 + 10068113 ACTTCTCTCTCCT i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 78928 13 - 709587 ACTTCTCTCTCCT i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1179236 13 - 2246441 ACTTCTCTCTCCT i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1248612 13 + 48283576 ACTTGTCCCTCAT i otoGar3.GL873522 C 0 C 0 s canFam3.chr4 37179914 13 + 88276631 ATTCCTCCCTCCC i canFam3.chr4 C 0 I 41 s dasNov3.JH562710 267272 13 - 960158 ACTTGTCCCTCCT i dasNov3.JH562710 C 0 C 0 e mm10.chr13 66002703 777 - 120421639 I e proCoq1.NW_012152163v1 777320 473 - 940639 I a score=168165.000000 s hg38.chr5_KI270795v1_alt 67192 14 + 131892 CCCTGCTTGGGGGG-- s panTro5.chr5 5317400 14 - 181907262 CCCTGCTTGGGGGG-- i panTro5.chr5 C 0 C 0 s panPan2.chr5 5579843 14 - 183735486 CCCTGCTTGGGGGG-- i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1709713 14 + 3967317 CCCTGCTTGGGGGG-- i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4586491 14 + 163208435 CCCTGCTCGGGGGG-- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5767921 14 - 180051392 CCCTGCTTGGGAGG-- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5953846 14 - 181584905 CCCTGCTTGGGAGG-- i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 984506 14 - 16193990 CCCTGCTTGGGAGG-- i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1805103 14 - 21434487 CCCTGCTTGGGAGG-- i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4767505 14 - 82825804 CCCTGCTTGGGGGG-- i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 273459 14 + 2521317 CCCTGCTTGGGAGG-- i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1755171 14 - 2415367 CCCTGCTTGGGAGG-- i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64098851 14 + 204313951 CCTGGCTCGGGAGG-- i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2223633 14 + 10068113 CCCTGCTCGGGAGG-- i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 78941 14 - 709587 CCCTGCTTGGGAGG-- i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1179249 14 - 2246441 CCCTGCTCGGGAGG-- i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1248625 14 + 48283576 CCCTACTCAGGAAG-- i otoGar3.GL873522 C 0 C 0 s dasNov3.JH562710 267285 16 - 960158 GCCTGCTTGGGAGGGA i dasNov3.JH562710 C 0 C 0 e mm10.chr13 66002703 777 - 120421639 I e canFam3.chr4 37179927 41 + 88276631 I e proCoq1.NW_012152163v1 777320 473 - 940639 I a score=110585.000000 s hg38.chr5_KI270795v1_alt 67206 8 + 131892 CCTGCATG s panTro5.chr5 5317414 8 - 181907262 CCTGCATG i panTro5.chr5 C 0 C 0 s panPan2.chr5 5579857 8 - 183735486 CCTGCATG i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1709727 8 + 3967317 CCTGCATG i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4586505 8 + 163208435 CCTGCATG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5767935 8 - 180051392 CCTGCATG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5953860 8 - 181584905 CCTGCATG i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 984520 8 - 16193990 CCTGCATG i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1805117 8 - 21434487 CCTGCATG i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4767519 8 - 82825804 CCTGCGTG i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 273473 8 + 2521317 CCTGCATG i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1755185 8 - 2415367 CCTGCATG i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64098865 8 + 204313951 CCTGCATG i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2223647 8 + 10068113 CCTGCATG i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 78955 8 - 709587 CCTGTATG i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1179263 8 - 2246441 CCTGCGTG i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1248639 8 + 48283576 CCTCTATG i otoGar3.GL873522 C 0 C 0 s canFam3.chr4 37179968 8 + 88276631 CCCCCATG i canFam3.chr4 I 41 C 0 s dasNov3.JH562710 267301 8 - 960158 CCTCCATG i dasNov3.JH562710 C 0 I 70 e mm10.chr13 66002703 777 - 120421639 I e proCoq1.NW_012152163v1 777320 473 - 940639 I a score=396356.000000 s hg38.chr5_KI270795v1_alt 67214 46 + 131892 GGTCACTGAGTCACCGAAACCCTGGgca-ggctggagaggcagcggg s panTro5.chr5 5317422 46 - 181907262 GGTCACTGAGTCACCGAAACCCTGGGCA-GGCTGgagaggcagcgag i panTro5.chr5 C 0 C 0 s panPan2.chr5 5579865 46 - 183735486 GGTCACTGAGTCACTGAAACCCTGGGCA-GGCTGGAGAGGCAGCGAG i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1709735 45 + 3967317 GGTCACTGAGTCACCGAAACCCTGGGCA-GGCTGGAGAGGCAG-GGG i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4586513 46 + 163208435 GGTCACTGAGTCACTGAAACCCTGGGCA-GACTGGAGAGGCAGCGGG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5767943 46 - 180051392 GGTCACTGGGTCACTGTAACCCTGGGCA-AGCcggagaggcagcggg i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5953868 46 - 181584905 GGTCACTGGGTCACTGTAACCCTGGGCA-AGCCGGAGAGGCAGCGgg i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 984528 44 - 16193990 GGTCACTGGGTCAC--TAACCCTGGGCA-AGCCGGAGAGGCAGCGgg i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1805125 46 - 21434487 GGTCACTGGGTCACTGTAACCCTGGGCA-AGCCGGAGAGGCAGCagg i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4767527 46 - 82825804 GGTCACTGGGTCACTGTAACCCTGGGCA-AGCCGGAGAGGCAGCGgg i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 273481 46 + 2521317 GGTCACTGGGTCACTGTAACCCTGGGCA-AGCCGGAGAGGCAGCGGG i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1755193 46 - 2415367 GGTCACTGGGTCTCTGTAACCCTGGGCA-AGCCGGAGAGGCAGCGgg i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64098873 38 + 204313951 GGTCACTG--------TAACCCTGGGCA-AGCTGGAGAGGCAGTGGG i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2223655 38 + 10068113 GGTCACTG--------CAACCCTGGGCA-AGCtggagaggcagcggg i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 78963 38 - 709587 GGTCACTG--------TAACCCTGGGCA-AGCtggagaggcagcggg i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1179271 38 - 2246441 GGTCACTG--------TAACCCTGGGCA-AGCTGGAGAGGCAGCGGG i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1248647 45 + 48283576 GGCTGTTCAAAAAA--GAATCCAGGAAGTAACCCCCTAACCCTTAGG i otoGar3.GL873522 C 0 C 0 s canFam3.chr4 37179976 38 + 88276631 GGTCACTG--------TAATGTCTGGTC-AGTTGGAGAGGCAGTGTT i canFam3.chr4 C 0 C 0 e mm10.chr13 66002703 777 - 120421639 I e proCoq1.NW_012152163v1 777320 473 - 940639 I e dasNov3.JH562710 267309 70 - 960158 I a score=2531756.000000 s hg38.chr5_KI270795v1_alt 67260 236 + 131892 gcatggaggccttcagggctggatgggctggggccgggtcccagctgcatct-------cctctcccctctccc--tgtgg-c-tccagcaactcgcttcctgtctttgggcctctgtgtttcttcatctcaactatggggtgatgatagc-tgcctctca-ggctggtgagaggatcatggaatgaggtggacacattttgt----agaatgtGGACTAGAGGGGAGCGAAGGGCATCTTCACCATCTCCTC s panTro5.chr5 5317468 234 - 181907262 gcatggaggccttcagggctggatgggctggggccgggtcccggctgcatct-------cctctcccctctccc--tgtgg-c-tccagcaactcgcttcctgtctttgggc--ctgtgtttcttcatctgaactatggggtgatgatagc-tgcctctca-ggctggtgagaggatcatggaatgaggtggacacattttgt----agaatgtGGACTAGAGGGGAGCGAAGGGCATCTTCACCATCTCCTC i panTro5.chr5 C 0 C 0 s panPan2.chr5 5579911 234 - 183735486 gcatggaggccttcagggctggatgggctggggccggctcccagctgcatct-------cctctcccctctccc--tgtgg-c-tccagcaactcgcttcctgtctttgggc--ctgtgtttcttcatctgaactatggggtgatgatagc-tgcctctca-ggctggtgagaggatcatggaatgaggtggacacattttgt----agaatgtGGACTAGAGGGGAGCGAAGGGCATCTTCACCATCTCCTC i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1709780 234 + 3967317 GCATGGAGGCCTTCAGGGCTGGATGGGCTGGGGCCGGGTCCCAGCTGCATCT-------CCTCTCACCTCTCCC--TGTGG-C-TCCAgcaactcgcttcctgtctttgggc--ctgtgtctcttcatctgaactatggggtgatgatagc-tgcctctca-ggctggtgagaggctcatggaatgaggtGGACACATTTTGT----AGAATGTGGACTAGAGGGGAGCGAAGGGCATCTTCACCATCTCCTC i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4586559 241 + 163208435 GCATGGAGGCCTTCAGGGCTGGATGGGCTGGGGCTGGGTCCCAGCTGCATCTCCTCTCCCCTCTCCCCTCTCCC--TGTGG-C-TCCAgcaactcgcttcatgtctttgggc--ctgtgtttcttcatctgaactatggggtaatgatagc-tgcctctca-ggctggtgagaggatcatggaatgaggtggacacattttgt----agaatgtGGACTAGAGGGGAGCGAAGGGCATCTTCACCATCTCCTC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5767989 231 - 180051392 gcatggaggccttcagggctggatgggctggggctgggtcccagctgcatct-------cctctcccctctacc--tgtgg-c-tccagcaactcacttcatatctttgggc--ctgtgtctcttcatctgaactacagggtagtgatagc-tgcctctca-ggctggtgagaggatcatggaatgaggtggacacacgttgt----agaatgtGGACTAGCGGGGAGTGAAGCGCATCTTCACCATCTC--- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5953914 231 - 181584905 gcatggaggccttcagggctggatgggctggggccgggtcccagctgcatct-------cctctcccctctacc--tgtgg-c-tccagcaactcacttcatatctttgggc--ctgtgtctcttcatctgaactacagggtagtgatagc-tgcctctca-ggctggtgagaggatcatggaatgaggtggacacacgtTGT----AGAATGTGGACTAGCGGGGAGTGAAGCGCATCTTCACCATCTC--- i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 984572 231 - 16193990 gcatggaggccttcagggctggatgggctggggccgggtcccagctgcatct-------cctctcccctctacc--tgtgg-c-tccagcaactcacttcatatctttgggc--ctgtgtctcttcatctgaactacagggtagtgatagc-tgcctctca-ggctggtgagaggatcatggaatgaggtggacacacgtTGT----AGAATGTGGACTAGCGGGGAGTGAAGCGCATCTTCACCATCTC--- i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1805171 231 - 21434487 gcatggaggccttcagggctggatgggctggggccgggtcccagctgcatct-------cctctcccctctccc--tgtgg-c-tccagcaactcgcttcatgtctttgggc--ctgtgtctcttcatctgaactatggggtagtgatagc-tgcctctca-ggctggtgagaggatcatggaatgaggtggacacactttgt----agaatgtGGACTAGCGGGGAGTGAAGCGCATCTTCACCATCTC--- i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4767573 234 - 82825804 gcatggaggccttcagggctggatgggctggggccaggtcccagctgcatct-------cctctcccctctccc--tgtgg-c-tccagcaactcgcttcatgtctttgggc--ctgtgtctcttcatctgaactatggggtaatgatagc-tgcctctca-ggctggtgagaggatcatggaatgaggtggacatactttgt----agaatgtGGACTAGTGGGGAGTGAAGCGCATCTTCACCATCTCCTT i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 273527 231 + 2521317 GCATGGAGGCCTTCAGGGCTGGATGGGCTGGGGCCGGGTCCCAGCTGCATCT-------CCTCTCCCCTCTCCC--TGTGG-C-TCCAgcaactcgcttcatgtctttgggc--ctgtgtctcttcatctgaactatggggtagtgatagc-tgcctctca-ggctggtgagaggatcatggaatgaggtggacacactttgt----agaatgtGGACTAGCGGGGAGTGAAGCGCATCTTCACCATCTC--- i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1755239 233 - 2415367 gcatggaggccttcagcgccagatgggctggggctgggtcccagctgcatct-------cctctccccgctccc--tgtgg-c-tccagcaactcgcttcatgtctttgggc--ctgtgtctcttcatctgaactatggggtaatgatagc-tgcctctcg-ggctggtgaggggatcatggaatg-ggtggacacactttgt----agaatgTGGACTAGCGGGGAGTGAAGCGCATCTTCACCATCTCGTT i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64098911 230 + 204313951 GCATGAAggccttcaggtttggatgggctggggctgggtcccagctgcatct-------cctcctgcctctcctgatgtgg-c-tccagtaagttgcttcatgtcctgggcc--ctgtgtctcttcatctgaatcatggggtagtgatagc-tgcctctca-ggctggtgagaagatcatggaatgaggtgaacacactttgt----agaatgtGGACTAGACGGGAGGGAAGGGCA---TCACCATCTC--- i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2223693 230 + 10068113 gcatggaggccttcagggttagatgggctggggtggggtcccagctgcatct-------tctcctccctctcctggtgtgg-c-tctggtaacttgcttcatgtcctgggac--ctgtgtctcttcatctgaatcatggggtagtgatagc-tgcctctca-ggctggtgagaggatcatggaatgaggtggacacactttgt----agaatatGGGCTGGAGGGGAGGGAAGCATA---TCAACATCTC--- i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 79001 230 - 709587 gcatggggaccttcagggttagatgggctggggccaggtcccagctgcatct-------cctcctgcctctcctggtgtgg-c-tctggtaacttgcttcatgtccttggac--ctgtgtctcttcatctgaatcgtggggtagtgatagc-tgcctctca-ggctggtgagaggatcatggaatgaggtggacacacgttgt----agaatgtGGGCTAGAGGGGAGGGAAGGGCA---TCACCATCTA--- i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1179309 229 - 2246441 GCATGGAGGCCTTCAGGGTTAGATGGGCTGGGGCCAGGTCCCAGCTGCATCT-------CCTCCTGCCTCTCCCGGTATGG-C-TCCAGTAACTTGCTTCATGTTCTGGGAC--CTGTGTCTCTTCATCTGAATCAT-GGGTAGTGATAGC-TGCCTCTCA-GACTGGTGAGAGGATTATGGAATGAGGTGGACACACTTTGT----AGAATGTGGACTAGAGAGGAGGGAAGGGCA---TCACCATCTC--- i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1248692 213 + 48283576 TCA-GGTGGCTGTCCG-GCTGGGT-GGTTGGGGCTGAAACCCAGCCTCATCT-------CCCTTCCACTATCCA---------------caaatcatatcatctctttgggc--ctcagactcttcatctgaactagggagtgataacagc-ggcctgtca-ggctggtaggaagatcatgga----gctgaacatgcttcgt----ggaactgGGCCAGAGGGGGAGGAAATGGCATCTTGATCATCTC--- i otoGar3.GL873522 C 0 C 0 s canFam3.chr4 37180014 204 + 88276631 GTGTG------------------------GTGGctgggtcccagttgca----------cctctcacctctcatggtgtggcc-ttctgtaaataactccatttttttgggt--cc--atctcctcatctggaccagggggtagtcaaagc-agtccttcagggctgctgagaggctcgtgga----tgtggatgtgctttgt----ggaatgtgaaCCAGAGGGATGTGATG-GCATATTCGTCTTCTCCTT i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 267379 224 - 960158 GCCTGGTggcctttactgttggatggtctggcgccaagtccccgcgccatca-------agactcaggg-------tgtag-ctttcagcaaattgctccatctctttgggc----------cttcatctgcactctgcaaaaacaacagcttgtctctcagggctggcgagaggattatgga----tgtggacatggtttgtagaAAGAAAGTAGACCAGAGGGCTGGGAATGGCATCTTAGCATTCTTCTC i dasNov3.JH562710 I 70 I 1014 e mm10.chr13 66002703 777 - 120421639 I e proCoq1.NW_012152163v1 777320 473 - 940639 I a score=323824.000000 s hg38.chr5_KI270795v1_alt 67496 30 + 131892 CTTCTTC---------ATTGTTCTTTACCGAGTGGGGAT s panTro5.chr5 5317702 30 - 181907262 CTTCTTC---------ATTGTTCTTTACCAAGTGGGGAT i panTro5.chr5 C 0 C 0 s panPan2.chr5 5580145 30 - 183735486 CTTCTTC---------ATTGTTCTTTACCAAGTGGGGAT i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1710014 30 + 3967317 CTTCTTC---------ATTGTTCTTTACCAAGTGGGGAT i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4586800 30 + 163208435 CTTCTTC---------ATTGTTCTTTACCCAGTGGGGAT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5768220 30 - 180051392 CTCCTTC---------ATTGTTCTTTACACAGTGGGGAT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5954145 30 - 181584905 CTCCTTC---------ATTGTTCTTTACACAGTGGGGAT i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 984803 30 - 16193990 CTCCTTC---------ATTGTTCTTTACACAGTGGGGAT i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1805402 30 - 21434487 CTCCTTC---------ATTGTTCTTTACACAGTGGGGAT i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4767807 30 - 82825804 CTCCTTC---------ATTGTTCTTTACACAGTGGGGAT i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 273758 30 + 2521317 CTCCTTC---------ATTGTTCTTTACACAGTGGGGAT i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1755472 30 - 2415367 CTCCTTC---------ATTGTTCTTTACACAGTGGGGAT i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64099141 30 + 204313951 CTTCTTC---------ATTATTCTTTACCCAGTGGGGAT i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2223923 30 + 10068113 CTTCTTC---------ATTGTTTTTTACCCAGTGGGGAT i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 79231 30 - 709587 CTTCTTC---------ATTGTTCTTTACCCAGTGAGGAT i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1179538 30 - 2246441 CTTCTTC---------ATTGTTCTTTACCCAGTGGGGAT i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1248905 27 + 48283576 ---CTCT---------GTGGCTCTCTTCCCAGCAGTGAT i otoGar3.GL873522 C 0 C 0 s canFam3.chr4 37180218 35 + 88276631 TTGCTTCTCTTTCAAGATTGTTCTTT----AGTGGTGCT i canFam3.chr4 C 0 C 0 e mm10.chr13 66002703 777 - 120421639 I e proCoq1.NW_012152163v1 777320 473 - 940639 I e dasNov3.JH562710 267603 1014 - 960158 I a score=126172.000000 s hg38.chr5_KI270795v1_alt 67526 12 + 131892 AAATATCAAAAG s panTro5.chr5 5317732 12 - 181907262 AAATATCAAAAG i panTro5.chr5 C 0 C 0 s panPan2.chr5 5580175 12 - 183735486 AAATATCAAAAG i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1710044 12 + 3967317 AAATATCAAAAG i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4586830 12 + 163208435 AAATATCAAAAG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5768250 12 - 180051392 AAATGTCAAAAG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5954175 12 - 181584905 AAATGTCAAAAG i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 984833 12 - 16193990 AAATGTCAAAAG i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1805432 12 - 21434487 AAATGTCAAAAA i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4767837 12 - 82825804 AAATGTCAAAAG i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 273788 12 + 2521317 AAATGTCAAAAA i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1755502 12 - 2415367 AAATGTCAAAAG i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64099171 12 + 204313951 AAACATCAGAAG i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2223953 12 + 10068113 AAAAATCAAAAG i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 79261 12 - 709587 GAACGTCAAAAG i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1179568 12 - 2246441 GAACATCGAAAG i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1248932 12 + 48283576 AAACATGGATAC i otoGar3.GL873522 C 0 C 0 s canFam3.chr4 37180253 12 + 88276631 AAACAGCAAAAT i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 268617 12 - 960158 AAAAAACAAAAA i dasNov3.JH562710 I 1014 C 0 e mm10.chr13 66002703 777 - 120421639 I e proCoq1.NW_012152163v1 777320 473 - 940639 I a score=50671.000000 s hg38.chr5_KI270795v1_alt 67538 4 + 131892 TCTT s panTro5.chr5 5317744 4 - 181907262 TCTT i panTro5.chr5 C 0 C 0 s panPan2.chr5 5580187 4 - 183735486 TCTT i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1710056 4 + 3967317 TCTT i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4586842 4 + 163208435 TCTT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5768262 4 - 180051392 TCTT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5954187 4 - 181584905 TCTT i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 984845 4 - 16193990 TCTT i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1805444 4 - 21434487 TCTT i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4767849 4 - 82825804 TCTT i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 273800 4 + 2521317 TCTT i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1755514 4 - 2415367 TCTT i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64099183 4 + 204313951 TCTT i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2223965 4 + 10068113 TCGT i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 79273 4 - 709587 TCTT i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1179580 4 - 2246441 TCTT i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1248944 4 + 48283576 TCTA i otoGar3.GL873522 C 0 C 0 s mm10.chr13 66003480 3 - 120421639 -TTT i mm10.chr13 I 777 I 1 s canFam3.chr4 37180265 4 + 88276631 TCTG i canFam3.chr4 C 0 I 2 s dasNov3.JH562710 268629 4 - 960158 ACTT i dasNov3.JH562710 C 0 C 0 e proCoq1.NW_012152163v1 777320 473 - 940639 I a score=761719.000000 s hg38.chr5_KI270795v1_alt 67542 54 + 131892 CCTTTAGGGGCAACAGGAATCAAACCAGCTCCC--------GC------AGGGAGCCTTAGAGATAGA s panTro5.chr5 5317748 54 - 181907262 CCTTTAGGGGCAACAGGAATCAAACCAGCTCCT--------GC------AGGGAGCCTTAGAGATAGA i panTro5.chr5 C 0 C 0 s panPan2.chr5 5580191 54 - 183735486 CCTTTAGGGGCAACAGGAATCAAACCAGCTCCC--------GC------AGGGAGCCTTAGAGATAGA i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1710060 52 + 3967317 CCTTTAGGGGCAACAGGAATCAAACCAGCTCCC--------GC------AGGGAGCCTTAGAGAT--A i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4586846 54 + 163208435 CCTTTAGGGGCAACCAAAATCAAACTAGCTCCC--------AC------AGCGAGCCGTAGAGATAGA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5768266 54 - 180051392 CCTTTAGGGGCAACAGGAATCAAACCAGCTCCT--------GC------AGGGAGCCTTAGAGATAGA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5954191 54 - 181584905 CCTTTAGGGGCAACAGGAATCAAACCAGCTCCT--------GC------AGGGAGCCTTAGAGATAGA i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 984849 54 - 16193990 CCTTTAGGGGCAACAGGAATCAAACCAGCTCCT--------GC------AGGGAGCCTTAGAGATAGA i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1805448 54 - 21434487 CCTTTAGGGGCAACAGGAATCAAACCAGCTCCT--------GC------AGGGAGCCTTAAAGATAGA i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4767853 54 - 82825804 CCTTTAGGGGCAACAGGAATCAAACCAGCTCCT--------GC------AGGGAGCCTTAGCGATACA i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 273804 54 + 2521317 CCTTTAGGGGCAACAGGAATCAAACCAGCTCCT--------GC------AGGGAGCCTTAGAGATAGA i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1755518 54 - 2415367 CCTTTAGGGGCAACAGCAATCAAACCAGCTCCT--------GC------GGGGAGCCTTAGAGATAGA i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64099187 54 + 204313951 CCTTTAGGAGCAATGGGAATCAAATCAGCCCCC--------GC------AGGAAGCCTTAGAGATAGA i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2223969 55 + 10068113 CCTTTAGGAGCAGCAGGAATCAAATCAGCCCCC-------GGC------AGGGAGCCTTAGAGATAGA i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 79277 54 - 709587 CCTTTAGGAGCAACAGGAATCAAATCAGCCCCT--------GC------AGGGAGCCTTAGAGATGGA i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1179584 54 - 2246441 CCTTTAGGAGCAACAGGAATCAAATCAGCCCCC--------GC------AGGGAGCCTTAGAGACAGA i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 777793 54 - 940639 CCTTTAGGGACGGCAGGAATCAAACCAGCCCCC--------AT------AGGGAGCCTGAGAAATAGA i proCoq1.NW_012152163v1 I 473 I 2792 s otoGar3.GL873522 1248948 53 + 48283576 CTGTTAGGAACAACAGGAGTC-AACCAGCCTCT--------AC------AGGAGGCCTGAGAAATAGA i otoGar3.GL873522 C 0 C 0 s mm10.chr13 66003484 59 - 120421639 CCTTCAGAGGCAAGA-TACTCAAGCTAGCCACC--------CCCACCCAAGGGAGGATTAGACATTGG i mm10.chr13 I 1 C 0 s canFam3.chr4 37180271 54 + 88276631 CCTTTGGGGACAATGGGAGTTAAGCCAGCCTCC--------AC------GGGGAGCCTTAGAAACAGA i canFam3.chr4 I 2 C 0 s dasNov3.JH562710 268633 59 - 960158 ---TTGGAGACCAGAGGAATCAAATCAGGCCCGTATTTCAAAC------AGGGAGCCTTAGAAATAGA i dasNov3.JH562710 C 0 C 0 a score=1814078.000000 s hg38.chr5_KI270795v1_alt 67596 167 + 131892 GTTTTGCTTGGTTCCTATGCTCGTCATTTCTT-CACTCACTC-----AGATAT------------------TCATTC-attgagtcatccactcaca------------cgtgtaccgagcacctctca------c--att----ggcatcgatgtggcactggggatagaaaggtggatgggacaccatcgctacctcgg--------------------------------------------------------------------------------agggactcttcggct s panTro5.chr5 5317802 167 - 181907262 GTTTTGCTTGGTTCCTATGCTCTTCATTTCTT-CACTCACTC-----AGATAT------------------TCATTC-attgagtcatccactcaca------------cgtgtaccgagcacctctca------c--att----ggcatcgatgtggcactggggatataaaggtggatgggacaccatcgctacctcgg--------------------------------------------------------------------------------agggactcttcggct i panTro5.chr5 C 0 C 0 s panPan2.chr5 5580245 167 - 183735486 GTTTTACTTGGTTCCTATGCTCTTCATTTCTT-CACTCACTC-----AGATAT------------------TCATTC-attgagtcatccactcaca------------cgtgtactgagcacctctca------c--att----ggcatcgatgtggcactggggataaaaaggtggatgggacaccatcgctacctcgg--------------------------------------------------------------------------------agggactcttcggct i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1710112 166 + 3967317 GTTTTGCTTGGTTCCTATGCTCttcatttctt-cactcactc-----agatat------------------tcattc-attgagtcatccactcaCA------------CGTGTACTGATCACCTCTCA------C--ACT----GGCATCGATGTggcactggggataaaaaggtggatgggacaccatcgctacctc-g--------------------------------------------------------------------------------agggactcttcggct i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4586900 167 + 163208435 GTTTTGCTTGGTTCCTATGCTCTTCATTTCtt-cactcactc-----agatat------------------tcattc-attgagtcatccactcaca------------cgtgtaccaagcacctctca------c--att----ggcatcgatgtggcactggggataaaaaggtggatgggacaccatcgctacctcag--------------------------------------------------------------------------------agggactctttgtct i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5768320 166 - 180051392 GTTCTGCCTGGTTCCTATGCTCttcatttctt-cactcactc-----agatat------------------tcattc-attgattgatccactcaCA------------CGTGTACCGAGCACCTCTCA------C--ATT----GGCAT-AATGTggcactggggataaaaaggtggatgggacaccatcgctacctcgg--------------------------------------------------------------------------------agggactcttcgtct i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5954245 166 - 181584905 GTTCTGCCTGGTTCCTATGCTCTTCATTTCTT-CACTCACTC-----AGATAT------------------TCATTC-attgattgatccactcaca------------tgtgtaccgagcacctctca------c--att----ggcat-aatgtggcactggggataaaaaggtggatgggacaccatcgctacctcgg--------------------------------------------------------------------------------agggactcttcgtct i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 984903 166 - 16193990 GTTCTGCCTGGTTCCTATGCTCTTCATTTCTT-CACTCACTC-----AGATAT------------------TCATTC-attgattgatccactcaca------------tgtgtaccgagcacctctca------c--att----ggcat-aatgtggcactggggataaaaaggtggatgggacaccatcgctacctcgg--------------------------------------------------------------------------------agggactcttcgtct i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1805502 166 - 21434487 GTTCTGCCTGGTTCCTATGCTCTTCATTTCTT-CACTCACTC-----AGATAT------------------TCATTC-attgattgatccactcaca------------cgtgtaccgagcacctctca------c--att----ggcat-aatgtggcactggggataaaaaggtggatgggacaccatcgctaccttgg--------------------------------------------------------------------------------agggactcttcgtct i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4767907 167 - 82825804 GTTCTGCCTGGTTCCTATGGTCttcatttctt-cactcactc-----agatat------------------tcattc-atcgattgatccactcaCA------------CGTGTACCGAGCACCTCTCA------C--ATT----GGCATCAATGTggcactggggataaaaaggtggatgggacaccatcgctacctcgg--------------------------------------------------------------------------------agggactcttcgtct i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 273858 166 + 2521317 GTTCTGCCTGGTTCCTATGCTCttcatttctt-cactcactc-----agatat------------------tcattc-attgattgatccactcaCA------------CGTGTACCGAGCACCTCTCA------C--ATT----GGCAT-AATGTggcactggggataaaaaggtggatgggacaccatcgctacctcgg--------------------------------------------------------------------------------agggactcttcgtct i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1755572 163 - 2415367 GTTCTGCCTGGTTCCTATGCTCTTCATTTCTT-CACTCACTC-----AGATAT------------------TCattc-----attgatccactcaca------------cgtgtaccgagcacctctca------c--att----gccatcaatgtggcactggggataaaaaggtggatgggacaccatcgctacctcgg--------------------------------------------------------------------------------agggactcttcatct i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64099241 179 + 204313951 ATTCTGCTTGACTCCTATGCTCTTTATTTCTT-TGCTCACTC-----AGATAT------------------TCATTC-ACTGGCTCATCCACTTGCAGTTCATCCACAGCATCCACCAAGCACCTCCCA------C--ACT----GGCATCGATGTggcactggggataaaaaggtggatgggacaccagcgccacctcag--------------------------------------------------------------------------------aggcactcatcgtct i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2224024 167 + 10068113 ACTCTGCTTGGCTCCTCTGCTGTTTATTTCTT-GGCTCACTC-----AGGTAT------------------TCAATC-ACTGGttcatccacttgca------------catgtaccgagcacctccca------c--act----ggcatcgatgtggcactggggataaaaaggtggttgggacaccatcgccatctcag--------------------------------------------------------------------------------agggactcttcatct i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 79331 166 - 709587 ATTCTGCTTGGCTCCTATGCTCTTTATTTCTT-TGCTCACTC-----AGAT-T------------------TCattc-actggttcatccacttgca------------cttgtaccgagcacctccca------c--act----ggcatcgatgtggtactggggataaaaaggtggataggacaccatcgctaccttgg--------------------------------------------------------------------------------agggactcttcgtct i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1179638 167 - 2246441 ATTCTCCTTGGCTTCTATGTTGTTTATTTCTT-TGCTCACTC-----AGATAT------------------TCATTC-ACTGGTTCATCCACTTGCA------------GGTGTACCGAGCACCTCCCA------C--ACT----GGCATCAATGTggcactggggataaaaaggtggatgggacaccagtgccacctcag--------------------------------------------------------------------------------agggactcttcgtct i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1249001 160 + 48283576 ATTGGGCTTGCTTCCTCTGCTATTCATTTCTT-CACTCACTT-----GGATAG------------------TCattc-att--------cattcaca------------catttactaatcaccacccatg----t--gtc----aaccctgattaggcaccaggaagaagaaggtgaataggacatgattcccaccttgg--------------------------------------------------------------------------------agg-attcttagtcc i otoGar3.GL873522 C 0 C 0 s mm10.chr13 66003543 144 - 120421639 TATCTGCTTGCTCCCTATGCCATTTATTTCTTACCCCCACTC-----TG------------------------------------TACCCATCCACA------------CA-GTACAG---ACCTCCCAAGGGACA--GCT----AGACTTGATGCTGTTCAGAGGTTCAGAAGGAGGATGCGACTGCAT-GCT-CCTGAG--------------------------------------------------------------------------------AGGAACT-------T i mm10.chr13 C 0 C 0 s canFam3.chr4 37180325 242 + 88276631 ----ACTCTGTTTCCTAAGTTATTCATTTCTT-----TACTC-----AAATAT------------------TCACTCCattcattcactcactcaca------------catttattgagtgtttccca------tgggcc----gctattgactgggcactggcaataaaatggtgaacagaacatgattctcacctctgcggggccgccagttgagtgggAATTCCGGTAAAGGGAGAGACCATTGCCATGAATTTGGGTAAGGCAGGCTGTTGATTTTAGGGACTCTGCAGCC i canFam3.chr4 C 0 I 217 s dasNov3.JH562710 268692 193 - 960158 -ATTTGCTTGTTTGCTAGGCTAGTCATTTCTT-TGCCCACTCACTCTAGGTAtcactcattcattcattcatcattc-attcattcattcatttata------------catttactgagcccctcctg------t--gtgaccagccactggcttagcactggggataaagaggtgaatggggcccagttcctactttgg--------------------------------------------------------------------------------agggcctcacggtct i dasNov3.JH562710 C 0 C 0 e proCoq1.NW_012152163v1 777847 2792 - 940639 I a score=143251.000000 s hg38.chr5_KI270795v1_alt 67763 10 + 131892 agtgaggagg s panTro5.chr5 5317969 10 - 181907262 agtgaggagg i panTro5.chr5 C 0 C 0 s panPan2.chr5 5580412 10 - 183735486 agtgaggagg i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1710278 10 + 3967317 agtgaggagg i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4587067 10 + 163208435 agtgaggagg i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5768486 10 - 180051392 agtgaggagg i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5954411 10 - 181584905 agtgaggagg i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 985069 10 - 16193990 agtgaggagg i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1805668 10 - 21434487 agtgaggagg i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4768074 10 - 82825804 agtgaggagg i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 274024 10 + 2521317 agtgaggagg i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1755735 10 - 2415367 agtgaggagg i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64099420 10 + 204313951 agtgaagagg i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2224191 10 + 10068113 aatgaggagg i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 79497 10 - 709587 agtgaggagg i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1179805 10 - 2246441 agtgaggagg i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1249161 10 + 48283576 aatgaggaag i otoGar3.GL873522 C 0 C 0 s mm10.chr13 66003687 10 - 120421639 AGTGTGGGGG i mm10.chr13 C 0 I 3888 s dasNov3.JH562710 268885 10 - 960158 agcggggaag i dasNov3.JH562710 C 0 C 0 e canFam3.chr4 37180567 217 + 88276631 I e proCoq1.NW_012152163v1 777847 2792 - 940639 I a score=15300.000000 s hg38.chr5_KI270795v1_alt 67773 1 + 131892 c s panTro5.chr5 5317979 1 - 181907262 c i panTro5.chr5 C 0 C 0 s panPan2.chr5 5580422 1 - 183735486 c i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1710288 1 + 3967317 c i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4587077 1 + 163208435 c i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5768496 1 - 180051392 c i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5954421 1 - 181584905 c i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 985079 1 - 16193990 c i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1805678 1 - 21434487 c i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4768084 1 - 82825804 c i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 274034 1 + 2521317 c i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1755745 1 - 2415367 c i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64099430 1 + 204313951 C i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2224201 1 + 10068113 c i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 79507 1 - 709587 c i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1179815 1 - 2246441 c i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1249171 1 + 48283576 c i otoGar3.GL873522 C 0 I 100 s dasNov3.JH562710 268895 1 - 960158 c i dasNov3.JH562710 C 0 I 101 e mm10.chr13 66003697 3888 - 120421639 I e canFam3.chr4 37180567 217 + 88276631 I e proCoq1.NW_012152163v1 777847 2792 - 940639 I a score=30903.000000 s hg38.chr5_KI270795v1_alt 67774 3 + 131892 TCT s panTro5.chr5 5317980 3 - 181907262 TCT i panTro5.chr5 C 0 C 0 s panPan2.chr5 5580423 3 - 183735486 TCT i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1710289 3 + 3967317 TCT i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4587078 3 + 163208435 TCT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5768497 3 - 180051392 TTT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5954422 3 - 181584905 TTT i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 985080 3 - 16193990 TTT i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1805679 3 - 21434487 TTT i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4768085 3 - 82825804 TCT i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 274035 3 + 2521317 TTT i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1755746 3 - 2415367 TCT i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64099431 3 + 204313951 TCT i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2224202 3 + 10068113 TCT i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 79508 3 - 709587 TCT i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1179816 3 - 2246441 TCT i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1249272 3 + 48283576 TCA i otoGar3.GL873522 I 100 C 0 s dasNov3.JH562710 268997 3 - 960158 TCT i dasNov3.JH562710 I 101 C 0 e mm10.chr13 66003697 3888 - 120421639 I e canFam3.chr4 37180567 217 + 88276631 I e proCoq1.NW_012152163v1 777847 2792 - 940639 I a score=30169.000000 s hg38.chr5_KI270795v1_alt 67777 3 + 131892 TCC s panTro5.chr5 5317983 3 - 181907262 TCC i panTro5.chr5 C 0 C 0 s panPan2.chr5 5580426 3 - 183735486 TCC i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1710292 3 + 3967317 TCC i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4587081 3 + 163208435 TCC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5768500 3 - 180051392 CCC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5954425 3 - 181584905 CCC i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 985083 3 - 16193990 CCC i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1805682 3 - 21434487 CCC i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4768088 3 - 82825804 CCC i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 274038 3 + 2521317 CCC i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1755749 3 - 2415367 CTC i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64099434 3 + 204313951 CCT i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2224205 3 + 10068113 CCC i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 79511 3 - 709587 CCC i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1179819 3 - 2246441 CCC i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1249275 3 + 48283576 CTT i otoGar3.GL873522 C 0 C 0 s canFam3.chr4 37180784 3 + 88276631 TTC i canFam3.chr4 I 217 C 0 s dasNov3.JH562710 269000 3 - 960158 CCC i dasNov3.JH562710 C 0 I 163 e mm10.chr13 66003697 3888 - 120421639 I e proCoq1.NW_012152163v1 777847 2792 - 940639 I a score=5199988.000000 s hg38.chr5_KI270795v1_alt 67780 497 + 131892 TGCCTGG-----------AGGACACGC-------------------GTGTGGT-----------CAGG----------------------------------GAGAGCTTTGCAGAGGAGAGGCC----------------------------------------A-CAAAGCTGTCCTT--GTGGTTTAAGGAGTTTGCC-GGTGGCCT-GGGGTGGGGCAGTAGGGACAtcatttatttgaaaaatatttattgactaactactacatgccaggcactgtcctcagtgtggggac---acagctgtggacggcagagatgaaactc--tgccttcaaggagacggctttctggtggaaggtcatagaagccaccg--agcagtgag-------ggggcagtggcag--agc-tgct----gtttcataccggctggtcaggacaggcctcggcga-gagacgccatctgggcagagatctgcaggggccaggggagtggcccacagggataccagga------------------gcagaggggatggcgggacgca---ttcctgaagtggaggaactctctctggg-ctccgggaaaagc-aggacacccaagctgcaggg-------------------gaggtggggggc-gtg-aggtacgatggggtgcgggggt s panTro5.chr5 5317986 517 - 181907262 TGCCTGG-----------AGGACACGT-------------------GTGTGGT-----------CAGG----------------------------------GAGAGCTTTGCAGAGGAGAGGCC----------------------------------------A-CAAAGCTGTCCTT--GTGGTTTAAGGAGTTTGCCAGGTGGCCT-GGGGTGGGGCAGTAGGGACAtcatttatttgaaaaatatttattgactaactactacatgccaggcactgtcctctgtgtggggac---acagctgtggacggcagagatgaaactt--tgccttcaaggagacggctttctggtggaaggtcatagaagccaccg--agcagtgag-------ggggcagtggcag--agc-tgct----gtttcgtaccggctggtcaggacaggcctcggcga-gagacgccatctgggcagagatctgcaggggccaggggagtggcccacagggataccagga------------------gcagaggggatggcgggacgca---ttcctgaagtggaggaactctctctggg-ctccgggaacagc-aggacacccaagctgcaggggaggtggggggcgtgaggtgaggtggggggc-gtg-aggtacgatggggtgcGGGGGT i panTro5.chr5 C 0 C 0 s panPan2.chr5 5580429 498 - 183735486 TGCCTGG-----------AGGACACGC-------------------GTGTGGT-----------CAGG----------------------------------GAGAGCTTTGCAGAGGAGAGGCC----------------------------------------A-CAAAGCTGTCCTT--GTGGTTTAAGGAGTTTGCCAGGTGGCCT-GGGGTGGGGCAGTAGGGACAtcatttatttgaaaaatatttattgactaattactacatgccaggcactgtcctcagtgtggggac---acagctgtggacggcagagatgaaactc--tgtcttcaaggagacggctttctggtggaaggtcatagaagccaccg--agcagtgag-------ggggcagtggcag--agc-tgct----gtttcgtaccggctggtcaggacaggcctcggcga-gagacgccatctgggcagagatctgcaggggccaggggagtggcccacagggataccagga------------------gcagaggggatggcgggacgca---ttcctgaagtggaggaactctctctggg-ctccgggaacagc-aggacacccaagctgcaggg-------------------gaggtggggggc-gtg-aggtacgaTGGGGTGCGGGGGT i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1710295 497 + 3967317 TGCCTGG-----------AGGACACGC-------------------GTGTGGT-----------CAGG----------------------------------GAGAGCTTTGCAGAGGAGAGGCC----------------------------------------A-CAAAGCTGTCCTT--GTGGTTTAAGGAGTTTGCCAGGTGGCCT-GGGGTGGGGCAGTAGGGACAtcatttatttgaaaaatatttattgactaactactacatgccaggcactgtcctcagtgtggggac---acagctgtggatggcagagatgaaactc--tgccttcaaggagacggctttctggtggaaggtcatagaagccaccg--agcagtga--------ggggcagtggcag--agc-tgct----gtttcgtaccggctggtcaggacaggcctcggcga-gagacgccatctgggcagagatctgcaggggccaggggagtggcccacagggataccagga------------------gcagaggggatggcgggacgca---ttcctgaagtggaggaactctctctggg-ctccgggaaaagc-aggacacccaagctgcaggg-------------------gaggtggggggc-gtg-aggtacgaTGGGGTGCGGGGGT i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4587084 497 + 163208435 TGCCTGG-----------AGGACACAT-------------------GTGTGGT-----------TAGG----------------------------------GAGAGCTTTGCAGAGGAGAGGCC----------------------------------------A-CAAATCTGTCCTT--GTGGTTTAAGGAGTTTGCCAGGTGACCT-GGGGTGGGGCAGTAGGGACAtcatttatttgaaaaatatttattgactaactactacatgccaggcactgtcctcagtgtggggac---acagctgtggacagtggagatgaaactc--tgccttcaaggagacggctttctggtggaaggtcatagaagccaccg--agcagtgag-------ggggcagtgacgg--ggc-tgct----gtttcgtaccggttggtcaggacaggcctcggcga-gagacaccatctgggcagagatctgcaggggccaggggagtggcccacagggataccagga------------------gcagaggggatggcgggacgca---ttcctgaagtggaggaactctctctggg-ctccgggaaaagc-aggacacccaagctgcaggg-------------------gagGT-GGGGGC-GTG-AGGTACGACGGGGTGCGGGGGT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5768503 465 - 180051392 TGCCTGG-----------AGGACATGT-------------------GTGTGGT-----------CGGA----------------------------------GAGAGCTTTGCAGAGGGGAGGCC----------------------------------------A-TACAGCTGTCCTT--GTGGTTTAAGGAGTTTGCTAAGTGGCCT-GGGGTGGGGCAGTAGGGACAtcatttatttgaaaaatatttattgactgactactacatgccaggcactgtcctcagtgtggggac---acggctgtggacagcagagatgaaactc--tgccttcaaggagacggcattctggtggaaggTCGTAGAAGCCACCA--AGCAGTGAG-------GGGGCGGTGACAG--GGC-TGCT----GTTTCCTACCGGCTGGTGCAG-CAGGCCTCGGCGA-GAGGCGCCATCTGGGCAGAGATCTGCAGGGGCCGGGGGAGTGGCCCACAGGGATA-CGGGA------------------GCGGAGGG---------------------------------ACTCTCTCTGGG-CTCTGGGAGAAAC-AGGACACCCAAGCTGCAGGG-------------------GAGGT-GGGGGT-GTG-AGGTACAATGGGGTGTGGAGGT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5954428 465 - 181584905 TGCCTGG-----------AGGACATGT-------------------GTGTGGT-----------CAGA----------------------------------GAGAGCTTTGCAGAGGGGAGGCC----------------------------------------A-TACAGCTGTCCTT--GTGGTTTAAGGAGTTTGCCAAGTGGCCT-GGGGTGGGGCAGTAGGGACAtcatttatttgaaaaatatttattgactgactactacatgccaggcactgtcctcagtgtggggac---acggctgtggacagcagagatgaaactc--tgccttcaaggagacggcattctggtggaaggTCGTAGAAGCCACCA--AGCAGTGAG-------GGGGCGGTGACAG--GGC-TGCT----GTTTCGTACCGGCTGGTGCAG-CAGGCCTCGGCGA-GAGGCGCCATCTGGGCAGAGATCTGCAGGGGCCGGGGGAGTGGCCCACAGGGATA-CGGGA------------------GCGGAGGG---------------------------------ACTCTCTCTGGG-CTCTGGGAGAAAC-AGGACACCCAAGCTGCAGGG-------------------GAGGT-GGGGGT-GTG-AGGTACAATGGGGTGTGGAGGT i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 985086 465 - 16193990 TGCCTGG-----------AGGACATGT-------------------GTGTGGT-----------CAGA----------------------------------GAGAGCTTTGCAGAGGGGAGGCC----------------------------------------A-TACAGCTGTCCTT--GTGGTTTAAGGAGTTTGCTAAGTGGCCT-GGGGTGGGGCAGTAGGGACAtcatttatttgaaaaatatttgttgactgactactacatgccaggcactgtcctcagtgtggggac---acggctgtggacagcagagatgaaactc--tgccttcaaggagacggcattctggtggaaggTCGTAGAAGCCACCA--AGCAGTGAG-------GGGGCGGTGACAG--GGC-TGCT----GTTTCGTACCGGCTGGTGCAG-CAGGCCTCGGCAA-GAGGCGCCATCTGGGCAGAGATCTGCAGGGGCCGGGGGAGTGGCCCACAGGGATA-CGGGA------------------GCGGAGGA---------------------------------ACTCTCTCTGGG-CTCTGGGAGAAAC-AGGACACCCAAGCTGCAGGG-------------------GAGGT-GGGGGT-GTG-AGGTACAATGGGGTGTGGAGGT i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1805685 494 - 21434487 TGCCTGG-----------AGGACATGT-------------------GTGTGGT-----------CAGA----------------------------------GAGAGCTTTGCAGAGGGGAGGCC----------------------------------------A-TACAGCTGTCCCT--GTGGTTTAAGGAGTTTGCCAAGTGGCCT-GGGGTGGGGCAGTAGGGACAtcatttatttgaaaaatatttattgactgactactacatgccaggcactgtcctcagtgtggggac---acggctgtggacagcagagatgaaactc--tgccttcaaggagacggcattctggtggaaggTCGTAGAAGCCACGG--AGCAGTGAG-------GGGGCGGTGACAG--GGC-TGCT----GTTTCGTACCGGCTGGTGCAG-CAGGCCTTGGCGA-GAGGCGCCATCTGGGCAGAGATCTGCAGGGGCCGGGGGAGTGGCCCACAGGGATA-CAGGA------------------GCGGAGGGG-TGGCGGGACACA---TTCCTGAAGTGGAGGAACTCTCTCTGGG-CTCTGGGAGAAAC-AGGACACCCAAGCTGCAGGG-------------------GAGGT-GGGGGC-GTG-AGGTACAATGGGGTGTGGGGGT i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4768091 495 - 82825804 TGGCTGG-----------AGGACATGT-------------------GTGTGGT-----------CAGA----------------------------------GGGAGCTTTGCAGAGGAGAGGCC----------------------------------------G-TACAGCTGTCCTT--GTTGTTTAAGGAGTTTGCCAAGTGGCCT-GGGGTGGGGCAGTAGGGACAtcatttatttgaaaaatatttattgactgactactacatgccaggcactgtcgtcagtgtggggac---acggctgtggacagcagagatgaaactc--tgccttcaaggagacggcattctggtggaaggTCGTAGAAGCCACTG--AGCAGTGAG-------GGGGCGGTGACAG--GGC-TGGT----GTTTCACACTGGCTGGTGCAG-CAGGCCTCCTCGA-GAGGCGCCATCTGGGCAGAGATCTGCAGGGGCCAGGGGAGTGGCCCACAGGGATG-CGGGA------------------GTGGAGGGG-TGGCGGGACGCA---TTCCTGAAGTGGAGGAACTCTCTCTGGG-CTCCGGGAAAAAC-AGGACACCCAAGCTGCAGGG-------------------GAGGTGGGGGGC-GTG-AGGTACAATGGGGTGTGGGGGT i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 274041 494 + 2521317 TGCCTGG-----------AGGACATGT-------------------GTGTGGT-----------CAGA----------------------------------GAGAGCTTTGCAGAGGGGAGGCC----------------------------------------A-TACAGCTGTCCTT--GTGGTTTAAGGAGTTTGCCAAGTGGCCT-GGGGTGGGGCAGTAGGGACAtcatttatttgaaaaatatttattgactgactactacatgccaggcactgtcctcagtgtggggac---acggctgtggacagcagagatgaaactc--tgccttcaaggagacggcattctggtggaaggTCGTAGAAGCCACGG--AGCAGTGAG-------GGGGCGGTGACAG--GGC-TGCT----GTTTCGTACTGGCTGGTGCAG-CAGGCCTCGGCGA-GAGGCGCCATCTGGGCAGAGATCTGCAGGGGCCGGGGGAGTGGCCCACAGGGATA-CAGGA------------------GCGGAGGGG-TGGCGGGACGCA---TTCCTGAAGTGGAGGAACTCTCTCTGGG-CTCTGGGAGAAAC-AGGACACCCAAGCTGCAGGG-------------------GAGGT-GGGGGC-GTG-AGGTACAATGGGGTGTGGGGGT i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1755752 486 - 2415367 TGCCTGG-----------AGGACATGT-------------------GTGTGGT-----------CAGA----------------------------------GAGAGCTTTGCAGAGGAGAGGCC----------------------------------------A-TACAGCTGTCCTT--GTGGTTTAAGGAGTTTGCCAAGTGGCCT-GGGGTGGGGCAGTAGGGACAtcatttatttgaaaaatatgtattgactgactactacatgccaggcactgtcctcagtgtggggac---acgt---------gcagagatgaaactc--tgccttcaaggagacggcattctggtggaaggTCGTAGGAGCCACCG--AGCAGTGAG-------GGGGCAGTGACAG--GGC-TGCC----GTTTCGTACCGACTGGTACAG-CAGGCCTCGGCGA-GAGGCGCCATCTGGGCAGAGATCTGCAGGGGCCAGGGGAGTGGCCCACAGGGATA-CAGGA------------------GCAGAGGGG-TGGCGGGACGCA---TTCCTGAAGTGGAGGAACTCTCTCTGGG-CTCCAGGAAAAAC-AGGACACCCAAGCTGCAGGG-------------------GAGGTGGGGGGC-GTG-AGGTACAATGGGGTGTGGGGGT i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64099437 497 + 204313951 TGCCTGT-----------AGGACACGT-------------------GTGTGGT-----------CAGG----------------------------------GAGAGCTTTGCAGAGGAGAGGCC----------------------------------------A-TAGAGCTGTCCTT--GTGGTTTAAGGAGTTTGCCAGGTGGCC--AGGGTGTGGCAGTAGGGACAtcatttatttgggaaatagttattgactgcctaatacatgccaggcactgtctgcagtgtggagac---acagctgtggacagcagagatgaaactc--tgccttcaaggagacagctttct-gtggaaggtcataaaagctgcgg--agcagtgag------tggagtaatgacag--ggc-tgat----gttttgtacgggctggtcagggcaggcctcggtga-gaggtggcatctgggcagagacctgcaggggccaggggagtgggccacagggacactggga------------------gcagaggggatggcagg-tgca---ttcctgaagtggaggGACTCTTTCTGGATCCCCAGGAAAAGC-AGGACACCCAAGCCGCAGAG-------------------GAAGTTGGGGGCTGTG-AGGTACAACAGCGTTCTG-GGT i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2224208 497 + 10068113 TGCCTGC-----------AGGACACGT-------------------GTGTGGT-----------CAGG----------------------------------GAGAGCTTTGCAGAGGAGAGGCC----------------------------------------A-TAGAGCTGTCCTT--GTGGTTTAAGGAGTTTGCCAGGTGGCC--TGGGTGGGGCAGTAGGGACAtcatttatttgggaaatagttattgactgcctactacatgccaggcactgtctgcagtgtggggac---acagctgtggacagcagagatgaaactc--tgccttcaaggagacggctttct-gtggaaggtcataaaagccacgg--agcagtgag------tggagtaatgacag--ggc-tgct----gttttgtacgggctgctcagggcaggcctcggcaa-gaggtagcatctgggcagagacttgcaggggcccggggagtgagccacagggacactggga------------------gcagaggggatggcagg-tgca---ttcctgaagtggagggactctgtccggatccccaggaaaagc-aggACACCCAAGCCGCAGAG-------------------GAGGTGGGGGGCCGTG-AGCCACAACAGGGTTCGG-GGT i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 79514 492 - 709587 TGCCTGC-----------AGGACACGT-------------------GTGTGGT-----------CAGG----------------------------------GAGAGCTTTGCAGAGGAGAGGCC----------------------------------------A-TAGAGCTGTCCTT--GTGGTTTAAGGAGTTTGCCAGGTGGCG--GGGGTGGGGTCGTAGGGACAtcatttatttgggaagtatttattgactgcctaccacatgccaggcactgtctgcagtgtggggac---acagctgtggacagcagagatgaaactc--tgccttcaaggagacggctttct-gtggaaggtcataaaagccacgg--agcagtgag------tggagcaatgacag--ggc-tgct----gttttgtatgggctggtcagggcaggcctcagcga-gaggtggcatctgggcagagacctgcaggggccgggggagtgggccacagag-----ggga------------------gcagaggggatggcagg-tgca---ttcctgaagtggagggactcttcttggatccccaggaaaagc-aggacacccaagccgcagag-------------------gaggtggggggCTGTG-AGGTACAACAGGGTTCGG-GGT i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1179822 494 - 2246441 TGCCTGC-----------AGGACACAT-------------------GTGTGGT-----------CAGG----------------------------------GAGAGCTTTGCAGAGGAGAGGCC----------------------------------------A-TAGAGCTGTCCTT--GTGGTTTAAGGAGTTTGCCAGGTGGCC--GGGGTGGGGCAGTAGGGACAtcatttatttgggaaaaatttattgactgcctactacatgccgggcactgtctgcagtgtggggac---acagctgtggacagcagagatgaaactc--tgccttcaaggagacaactttct-gtggaaggtcataaaagccacgg--agcagtgag------tggagtaatgacag--ggc-tgc-------tttgtacaggctggtcagggcaggcctcggcga-gaggcggcatctgggcagagacctgcaggggccaggggagtgggccacagggacatcggga------------------gcagaggggatggcagg-tgca---ttcctgaagtggaggGACTCTTTCTGGATCCCCAGGAAAAGC-AGGATACCCAAGCCGCAGAG-------------------GAAGTGGGGGGCTGTG-AGGTACAACAGGGTTCGG-GGT i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1249278 632 + 48283576 TGTCTAGGAAATATGGCCAGCACACGTGCACACTTTGGTGCTGGGGGTGTGGTTTTGACCAGGACAGGGTAGGCCATCCTGTGGCAGTGGATCCCTGCCCTTGGGAGCTCAGGCAAGGGGTGGCTTTCCCCACCTGGAGGACTTGTGTGTGGTCAATTGAGGTCAA-TAGAGCTGTCC-T--GTGGTTTAAGGAGTTTGCCAAGAGGCCTGGGGGCGGGGCAGTGGGGACAtcatttatttaagaggtatttattgagtgcctactgtgtgccaggccctgtgctcagtatgggggcgtagcagctgtggacaacacagacaaaactctttgctttcaaggagctggctttcttttgggagatcttaactgccatga--agaaatgag-----gtgaagcagtgacagtagct-tgtt----gtttcatatcgagaagtctgggcaggcctcagtga-gaagggctatctaggcagagacctg-aggggacaaggaattgggccagacagatatttggaggat----ggctgggcagggagaaggaatagcaag-tgca---ttctggaagtagaggaactctttctgga-ccttgagaaaagcaaggaggtcagagccacaggc-------------------aggacagtggcg-gtg-ata---gccgggatgaggGAGT i otoGar3.GL873522 C 0 C 0 s canFam3.chr4 37180787 492 + 88276631 TGCCTGG-----------AGCACATGT-------------------GTGTCAT-----------CAAG----------------------------------GAGATTCTTTCAGAGGAGGGGAC----------------------------------------A-TGGAGCTGTACCT--GCAGTT--AGAGGTAGCCTAGGTAGCCTAGGCATGGGACAGCAGGGATGtcattaatcaaacaaaa---tatttgcttgctactgtgtgccaagcaatgttctaaggacagggat---acagttgtgaacaaaacagacaaatctc--tgctttcaaggaaatgactttctggtggggggtgacag----tactg--tggagaggggtaaagcagagtagtgatgg--tgcttgct----gttttgtatcgggtgctcagggtagggattggtga-caggtgccatttgggcagaggcctggaggaggcaagggagtgagccagatggagacttggggaaa----actgtag---gcagagggaacacagtg-caca--gtccctgaggtggagg-acccttgcggaa-ccc-----------aggtt------gctgccggg-------------------agggtggtgggc-gtgcaggtagtggggggagtaggga- i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 269166 516 - 960158 TGCCTGG-----------AGGACACA--------------------GTGTGGT-----------TGAG----------------------------------GAGATCCGAATGGAGAAGAGGAC----------------------------------------AGTGCAGCTGGCCTTAAGTTGAAGGAGGAGTTTGCCAGGTGGCCTGGGAGTGGGACAGCA-GGACAtcatttattctaaaggtacttattgagtacctgctatgtgtcagacactgtcctaagtgaggggat---acaactgtgaatgaaatacgaaaatctc--tgcccttaaggagatgactttctagcagaaggtgacaagtgctctggccaaaaatgaa-----gcagagcagtgatgg--ggg-tgcttgccactttatggtgggtggtcagg-caggcctcagtgataagatgccatttgcacagagacctgaacggggcaagggagtgagctaaatggatattgggtggaaaaacattgaag---gcagagggaacagaag--tgcaagggccccgaggtggaagagcacttgtggga-ttctaggagcagtaaggaggccagagctgcaggg-------------------ggagt----ggt-ggg-ag-----atgaggttagggggT i dasNov3.JH562710 I 163 I 232 e mm10.chr13 66003697 3888 - 120421639 I e proCoq1.NW_012152163v1 777847 2792 - 940639 I a score=1446048.000000 s hg38.chr5_KI270795v1_alt 68277 131 + 131892 gtacccggTCATCTCAGGCTTTGTAGGTCTggctgctggaaaattacaggatgcccagttacactggaatttcagataaaca--------------------------------gcaaat--------------------------aattttttagtataagtgt----------------------------------gtcccacgcaagtttg--------------------------------------------------------cctttctc s panTro5.chr5 5318503 131 - 181907262 GTCCCCGGTCATCTCAGGCTTTGTAGGTCTggctgctggaaaattacaggatgcccagttacactgaaatttcagataaaca--------------------------------gcaaat--------------------------aattttttagtataagtgt----------------------------------gtcccatgcaagtttg--------------------------------------------------------cctttctc i panTro5.chr5 C 0 C 0 s panPan2.chr5 5580927 131 - 183735486 GTCCCCGGTCATCTCAGGCTTTGTAGGTCTggctgctggaaaattacaggatgcccagttacactggaatttcagataaaca--------------------------------gcaaat--------------------------aattttttagtataagtgt----------------------------------gtcccatgcaagtttg--------------------------------------------------------cctttctc i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1710792 131 + 3967317 GTCCCCGGTCATCTCAGGCTTTGTAGGTCTggctgctggaaaattacaggatgcccagttacactggaatttcagataaaca--------------------------------gcaaat--------------------------aactttttagtataagtgt----------------------------------gtcccacgcaagtttg--------------------------------------------------------cctttctc i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4587581 131 + 163208435 GTCCCCGGTCATCTCAGGCTTTGTAGGTCTggctgccggaaaattacaggatgcccagttacattggaatttcagataaaca--------------------------------gcaaat--------------------------aattttttagtataagtgt----------------------------------gtcccacgcaagtttg--------------------------------------------------------cctttctc i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5768968 131 - 180051392 GTCCCCGGTCATCTCAGGCTTTGTAGGTCTggctgctggaaaattacaggatgcccagttacactggaattttagataaaca--------------------------------gcaaat--------------------------aattttttagtataagtgt----------------------------------gtcccacgcaagtttg--------------------------------------------------------cctttctg i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5954893 131 - 181584905 GTCCCCGGTCATCTCAGGCTTTGTAGGTCTggctgctggaaaattacaggatgcccagttacactggaattttagataaaca--------------------------------gcaaat--------------------------aattttttagtataagtgt----------------------------------gtcccacgcaagtttg--------------------------------------------------------cctttctg i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 985551 131 - 16193990 GTCCCCGGTCATCTCAGGCTTTGTAGGTCTggctgctggaaaattacaggatgcccagttacactggaattttagataaaca--------------------------------gcaaat--------------------------aattttttagtataagtgt----------------------------------gtcccacgcaagtttg--------------------------------------------------------cctttctg i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1806179 131 - 21434487 GTCCCCGGTCATCTCAGGCTTTGTAGGTCTggctgctggaaaattactggatgcccagttacactggaattttagataaaca--------------------------------gcaaat--------------------------aattttttagtataagtgt----------------------------------gtcccacgcaagtttg--------------------------------------------------------cctttctg i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4768586 131 - 82825804 GTCCCCGGTCATCTCAGGCTTTGTAGGTCTggctgctggaaaattacaggatgcccagttacactggaattttagataaaca--------------------------------gcaaat--------------------------aattttttagtataagtgt----------------------------------gtcccacgcaagtttg--------------------------------------------------------cctttctg i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 274535 131 + 2521317 GTCCCCGGTCATTTCAGGCTTTGTAGGTCTggctgctggaaaattactggatgcccagttacactggaattttagataaaca--------------------------------gcaaat--------------------------aattttttagtataagtgt----------------------------------gtcccacacaagtttg--------------------------------------------------------cctttctg i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1756238 131 - 2415367 GTTCCCGGTCATCTCAGCCTTTGTAGGTCTggctgctagaaaatcacaggatgcccagttacactggaattttagataaaca--------------------------------gcaaat--------------------------aattttttagtataagtgt----------------------------------gtcccacgcaagtttg--------------------------------------------------------cctttctg i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64099934 131 + 204313951 GGCCCAGGTCATCTCAGGCTTTGTAGGTCTggctgctggaaaaatacaggatgcccaattacattggaatctcagataaaca--------------------------------gcaaat--------------------------agttttttagtataaatat----------------------------------gtgccacgcaaGTTTG--------------------------------------------------------CCTTTCCC i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2224705 131 + 10068113 GCCCCGGACCATCTCAGGCTTTGTAGGTCTggctgctggaaaaatacaggatgcccagttacactggaatttcagataaaca--------------------------------gcaaat--------------------------cgttttttagtataagtgt----------------------------------gtcccacgcaaGTTTG--------------------------------------------------------CCTTTCCC i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 80006 131 - 709587 GGCCTGGGCCATCGCAGGCTTTATAGGTCTggctgctggaaaaatacaggatgcccaattacattggaatctcagataaata--------------------------------gcaaat--------------------------aattttttggtataagtgt----------------------------------gtcccacgcaaGTTTG--------------------------------------------------------CCTTTCTC i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1180316 131 - 2246441 GGCCCGGGTCATCTCAGGCTTTGTAGGTCTggctgctggaaaaatacaggatgcccgattacactggcatctcagataaaca--------------------------------gcaagt--------------------------cgttttttagtataaaggt----------------------------------gtgccacgcaaGTTTG--------------------------------------------------------CCTTTCCC i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1249910 279 + 48283576 GGCCCAGGTCGGCTGGGGCCTTGTAGGTCTggttgctaaaaaaatataggatgcccacttaaatttgaatttcagaaaaacatttttttaaataaaaaaagtatgtccagaaaggcaaatttgcataggacataaaatttaaaaaaaatttttaagtttgggcatggtggctcacacctgtaatcctagcagtctgggaggcccagacaggtgtatgtgctcattatgtatgagctcaggagttcaagaccagcctgagcaaaatcaagaccctatctc i otoGar3.GL873522 C 0 C 0 s canFam3.chr4 37181279 113 + 88276631 ----ctggcc-----------tgtgggtttggctgctggacaaatacagaacacccagttaaatctgaatttcatataaaca-----------------------------------aat--------------------------aattttttagtataagtat----------------------------------gagccatgcaagactg--------------------------------------------------------cctttctc i canFam3.chr4 C 0 C 0 e mm10.chr13 66003697 3888 - 120421639 I e proCoq1.NW_012152163v1 777847 2792 - 940639 I e dasNov3.JH562710 269682 232 - 960158 I a score=23880.000000 s hg38.chr5_KI270795v1_alt 68408 2 + 131892 tg s panTro5.chr5 5318634 2 - 181907262 tg i panTro5.chr5 C 0 C 0 s panPan2.chr5 5581058 2 - 183735486 tg i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1710923 2 + 3967317 tg i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4587712 2 + 163208435 tg i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5769099 2 - 180051392 tg i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5955024 2 - 181584905 tg i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 985682 2 - 16193990 tg i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1806310 2 - 21434487 tg i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4768717 2 - 82825804 tg i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 274666 2 + 2521317 tg i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1756369 2 - 2415367 tg i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64100065 2 + 204313951 TG i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2224836 2 + 10068113 TG i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 80137 2 - 709587 TG i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1180447 2 - 2246441 TG i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1250189 2 + 48283576 ta i otoGar3.GL873522 C 0 I 161 e mm10.chr13 66003697 3888 - 120421639 I e canFam3.chr4 37181392 0 + 88276631 C e proCoq1.NW_012152163v1 777847 2792 - 940639 I e dasNov3.JH562710 269682 232 - 960158 I a score=1780717.000000 s hg38.chr5_KI270795v1_alt 68410 159 + 131892 aaattc-aaaaaaagat--tttt----agttcctaatatccctttcttctttttaaaacattgttttaattgaccaataaaaattgcatattcttatggcctacaatatgatgttttggaatatgtatacatttatgggatgactaaattgagctaattaacatat s panTro5.chr5 5318636 159 - 181907262 aaattc-aaaaaaagat--tttt----agttcctaatatccctttcttctttttaaaacattgttttaattgaccaataaaaattgcatattcttatggcctacaatatgatgttttggaatatgtatacatttatgggatgactaaattgagctaattaacatat i panTro5.chr5 C 0 C 0 s panPan2.chr5 5581060 159 - 183735486 aaattc-aaaaaaagat--tttt----agtttctaatatccctttcttctttttaaaacattgttttaattgaccaataaaaattgcatattcttatggcctacaatatgatgttttggaatatgtatacatttatgggatgactaaattgagctaattaacatat i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1710925 159 + 3967317 aaattc-agaaaaagat--tttt----agttcctaatatccctttcttctttttaaaacattgttttaattgaccaataaaaattgcatattcttatggcctacaatatgatgttttggaatatgtatacatttatgggatgactaaattgagctaattaacatat i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4587714 159 + 163208435 aaattc-aaaaaaagat--tttt----ggttcctaatatccctttcttctttttaaaacattgttttaattgaccaataaaaattgcatatacttacggcctacaacatgatgttttggaatatgtatacatttatgggatgactaaattgagctaattaacatat i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5769101 160 - 180051392 aaattcaaaaaaaagat--tttt----agttcctaatatccctttcttctttttaaaacattgttttaattgaccaataaaaattgcatatacttatggcctacaacatgatgttttggaatatgtatacaattatgggatgactaaatcgagctaattaacatat i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5955026 159 - 181584905 aaattc-aaaaaaagat--tttt----agttcctaatatccctttcttctttttaaaacattgttttaattgaccaataaaaattgcatatacttatggcctacaacatgatgttttggaatatgtatacaattatgggatgactaaatcgagctaattaacatat i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 985684 159 - 16193990 aaattc-aaaaaaagat--tttt----agttcctaatatccctttcttctttttaaaacattgttttaattgaccaataaaaattgcatatacttatggcctacaacatgatgttttggaatatgtatacaattatgggatgactaaatcgagctaattaacatat i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1806312 159 - 21434487 aaattc-aaaaaaagat--tttt----agttcctaatatccctttcttctttttaaaacattgttttaattgaccaataaaaattgcatatacttatggcctacaacatgatgttttggaatatgtatacaattatgggatgactaaatcgagctaattaacatat i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4768719 159 - 82825804 aaattc-aaaaaaagat--tttt----agttcctaatatccctttcttctttttaaaacattgttttaattgaccaataaaaattgcatatacttatggcctacaacatgatgttttggaatatgtatacaattatgggatgactaaatcgagctaattaacatat i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 274668 159 + 2521317 aaattc-aaaaaaagat--tttt----agttcctaatatccctttcttctttttaaaacattgttttaattgaccaataaaaattgcatatacttatggcctacaacatgatgttttggaatatgtatacaattatgggatgactaaatcgagctaattaacatat i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1756371 158 - 2415367 aaattc-aaaaaaagat--tttt----agttcctaatatccctttcttc-ttttaaaacattgttttaattgaccaataaaaattgcatatacttatggcctacaacatgatgttttggaatatgtatacaattatgggatgactaaattgagctaattaacatat i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64100067 159 + 204313951 AAATTC-AAAAAAAGAT--TTTT----ATTTCCTAATATCCCTTTCTTCTTTGTAAAACAttgttttaattgaccaataaaagttgtatatacttgtggcctacaacatgatgttttggaatatatattcatttatgggatgactaaattgagctaattaacatat i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2224838 161 + 10068113 AAATTC-AAAAAAAGATAATTTT----ATCTCCTAATATCCCTTTCTTCTTTGTAAAACAttgttttaattgaccaataaaaattgtatatacttgtggcctacaacatgatgttttggaatatgtattcatttatgggatgactaaattgagctaattaacatat i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 80139 161 - 709587 AAATTA-AAAAAAAAAGATTTTT----ATTTCCTAATATCCCTTTCTTCTTTGTAAAACAttgttctaattgaccaataaaaattgtatatacttgtggcctacaacatgatgttttggaatatgtattcatttatgggatgactaaattgagctaattaacatat i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1180449 159 - 2246441 AAATTC-AAAAAAAGAT--TTTT----ATTTCCTAATATCCCTTTCTTCTTTGTAAAACAttgttttaattgaccaataaaaattgtatatacttgtggcctacaacacgatgttttggaagatgtattcatttatgggatgactaaattgagctaattaacatat i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1250352 162 + 48283576 aaatta-aaaataaaat--tttttttaaattcCTAATAAATCTTTATTCTTTGGAAAGt-ttattttaattgtcagataaaaagaatgtatatttatggtttacagcatgatgctttgaaatatgtatatatttgcgggatgactaaattgagctaattaacatat i otoGar3.GL873522 I 161 C 0 e mm10.chr13 66003697 3888 - 120421639 I e canFam3.chr4 37181392 0 + 88276631 C e proCoq1.NW_012152163v1 777847 2792 - 940639 I e dasNov3.JH562710 269682 232 - 960158 I a score=792626.000000 s hg38.chr5_KI270795v1_alt 68569 92 + 131892 gcattactttcca--ccttgtt----tttttttt-tcctgtggtgagaacacttaaaatct---------act--cttagcgattttcaagaatg-----cagtaca---ctgtcat-t s panTro5.chr5 5318795 91 - 181907262 gcattacttccca--ccttg-t----tttttttt-tcctgtggtgagaacacttaaaatct---------act--cttagcgattttcaagaatg-----cagtaca---ctgtcat-t i panTro5.chr5 C 0 C 0 s panPan2.chr5 5581219 90 - 183735486 gcattacttccca--ccttg------tttttttt-tcctgtggtgagaacacttagaatct---------act--cttagcgattttcaagaatg-----cagtaca---ctgtcat-t i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1711084 91 + 3967317 gcattacttccca--ccttg-t----tttttttt-tcctgtggtgagaacacttaaaatct---------act--cttagcgattttcaagaatg-----cagtaca---ctgtcat-t i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4587873 91 + 163208435 gcattacttccca--cattg-t----tttttttt-tcctgtggtgagaacacttaaaatct---------act--cttagcgattttcaagaatg-----cagtaca---ctgtcgt-t i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5769261 98 - 180051392 gcattacttccca--cat---c----tttttttc-ccctgtggtgagaacacttaaaatctactcttagcact--cttagcgattttcaagaatg-----cagtgta---ctgtcgt-t i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5955185 98 - 181584905 gcattacttccca--cat---c----tttttttc-ccctgtggtgagaacacttaaaatctactcttagcact--cttagcgattttcaagaatg-----cagtgta---ctgtcgt-t i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 985843 98 - 16193990 gcattacttccca--cat---c----tttttttc-ccctgtggtgagaacacttaaaatctactcttagcact--cttagcgattttcaagaatg-----cagtgta---ctgtcgt-t i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1806471 97 - 21434487 gcattacttccca--ca----c----cttttttc-ccctgtggtgagaacacttaaaatctactcttagcact--cttagcgattttcaagaatg-----cagtgta---ctgtcat-t i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4768878 98 - 82825804 gcattacttccca--cat---c----tttttttt-ccgtgtggtgagaacacttaaaatctactcttagcact--cttagcgattttcaagaatg-----cagtaca---ctgtcat-t i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 274827 98 + 2521317 gcattacttccca--cat---c----tttttttc-ccctgtggtgagaacacttaaaatctactcttagcact--cttagcgattttcaagaatg-----cagtgta---ctgtcat-t i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1756529 102 - 2415367 gcattacttccca--cat---cgttttttttttt-ccctgtggtgagaacacttaaaatccactcttagcact--cttagcgattttcaagaatg-----cagtgca---ctgtcat-t i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64100226 89 + 204313951 gcattacttccca--cat---ca---tttctttt-tcctgtggtgagaacacttataatct---------act--cttagcgattttcaagaata-----cagtacg---ctgtcat-- i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2224999 90 + 10068113 gcatgacttccca--cat---ca---ttttttttctcctgtggtgagaacacttcaaagct---------act--cttagcgattttcaagaata-----cagtacg---ctgtcac-- i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 80300 89 - 709587 gcattacttccca--cat---ca---tttttttc-tcctgtggcgagaacacttcaaatct---------act--cttagcgatttttaagaata-----cagtacg---ctgtcat-- i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1180608 90 - 2246441 gcattacttccca--cat---ca---tttttttt-tcctgtggtgagaacacttaaaatct---------act--cttagcgattttcaagaata-----cagtacg---ctgtcatt- i aotNan1.NW_018501968v1 C 0 I 46 s otoGar3.GL873522 1250514 93 + 48283576 gtattagctcacaagctt---t----tctttttt-gtgtgtgatgaaaacacttaaggtct---------actcccttcaggattttcaagtaaa-----cgataca---ttgttaa-t i otoGar3.GL873522 C 0 C 0 s dasNov3.JH562710 269914 68 - 960158 gcatggcttgcca-gcgt---c----tttatctt----------------------ggcct---------tct--------aattatccagactgtgggccagtacattcctgcc---- i dasNov3.JH562710 I 232 C 0 e mm10.chr13 66003697 3888 - 120421639 I e canFam3.chr4 37181392 0 + 88276631 C e proCoq1.NW_012152163v1 777847 2792 - 940639 I a score=44683.000000 s hg38.chr5_KI270795v1_alt 68661 8 + 131892 agctatg-c s panTro5.chr5 5318886 8 - 181907262 agctatg-c i panTro5.chr5 C 0 C 0 s panPan2.chr5 5581309 8 - 183735486 agctatg-c i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1711175 8 + 3967317 agctatg-c i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4587964 8 + 163208435 agctata-c i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5769359 8 - 180051392 agctata-c i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5955283 8 - 181584905 agctata-c i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 985941 8 - 16193990 agctata-c i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1806568 8 - 21434487 agctata-c i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4768976 8 - 82825804 agctata-c i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 274925 8 + 2521317 agctata-c i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1756631 8 - 2415367 agctata-c i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64100315 5 + 204313951 ---tcta-t i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2225089 5 + 10068113 ---tctg-t i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 80389 5 - 709587 ---tctg-t i cebCap1.NW_016107999v1 C 0 C 0 s otoGar3.GL873522 1250607 6 + 48283576 ---tgtagt i otoGar3.GL873522 C 0 C 0 s dasNov3.JH562710 269982 8 - 960158 atttatg-c i dasNov3.JH562710 C 0 I 194 e mm10.chr13 66003697 3888 - 120421639 I e canFam3.chr4 37181392 0 + 88276631 C e proCoq1.NW_012152163v1 777847 2792 - 940639 I e aotNan1.NW_018501968v1 1180698 46 - 2246441 I a score=302203.000000 s hg38.chr5_KI270795v1_alt 68669 38 + 131892 tgccacgacgtaccatggggctctttcacttattctcc s panTro5.chr5 5318894 38 - 181907262 tgccacggcataccatggggctcttgcacttattctcc i panTro5.chr5 C 0 C 0 s panPan2.chr5 5581317 38 - 183735486 tgccacggcataccatggggctcttgcacttattctcc i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1711183 38 + 3967317 tgccacggcgtaccatggggctcttgcacttattctcc i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4587972 38 + 163208435 tgccacggcgtaccatggggctcttgcacttattctcc i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5769367 38 - 180051392 tgccacggcgtaccatggagctcttgcacttactctcc i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5955291 38 - 181584905 tgccacggcgtaccatggagctcttgcacttactctcc i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 985949 38 - 16193990 tgccacggcgtaccatggagctcttgcacttactctcc i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1806576 38 - 21434487 tgccacggcgtaccatggagctcttgcacttactctcc i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4768984 38 - 82825804 tgccacagcgtaccatggagctcttgcacttactctcc i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 274933 38 + 2521317 tgccacggcgtaccatggagctcttgcacttactctcc i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1756639 38 - 2415367 tgccacggcacaccatggagctcttgcacttactctcc i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64100320 38 + 204313951 caccacggtgtaccatggagagcttgtgctctttcttt i calJac3.chr2 C 0 I 4 s saiBol1.JH378186 2225094 30 + 10068113 cgccacggtgtaccatgga--------gtcctttcttc i saiBol1.JH378186 C 0 I 4 s cebCap1.NW_016107999v1 80394 38 - 709587 cgccacggtgtaccatggagcgctttcgctctttcttc i cebCap1.NW_016107999v1 C 0 I 4 s otoGar3.GL873522 1250613 38 + 48283576 caccatgttagacaatggatgtcgtaaacttattgtcc i otoGar3.GL873522 C 0 C 0 e mm10.chr13 66003697 3888 - 120421639 I e canFam3.chr4 37181392 0 + 88276631 C e proCoq1.NW_012152163v1 777847 2792 - 940639 I e dasNov3.JH562710 269990 194 - 960158 I e aotNan1.NW_018501968v1 1180698 46 - 2246441 I a score=333977.000000 s hg38.chr5_KI270795v1_alt 68707 32 + 131892 ------ctaactggaactttgtgtcctttgacccacag s panTro5.chr5 5318932 32 - 181907262 ------ctaactggaactttgtgtcctttgacccacag i panTro5.chr5 C 0 C 0 s panPan2.chr5 5581355 32 - 183735486 ------ctgactggaactttgtgtcctttgacctacag i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1711221 30 + 3967317 ------ctcactggaactt--tgtcctttgacccccag i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4588010 32 + 163208435 ------ctaactggaactttgtgtcctttgacccacag i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5769405 32 - 180051392 ------ctaactggaactttgtgtcctttgacccacag i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5955329 32 - 181584905 ------ctaactggaactttgtgtcctttgacccacag i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 985987 32 - 16193990 ------ctaactggaactttgtgtcctttgacccacag i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1806614 32 - 21434487 ------ctaactggaactttgtgtcctttgacccacag i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4769022 32 - 82825804 ------ctaactggaactttgtgtcctttggcccacag i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 274971 32 + 2521317 ------ctaactggaactttgtgtcctttgacccacag i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1756677 32 - 2415367 ------ctcagtggaactttgtgtcctttgacccacag i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64100362 32 + 204313951 ------ctgactggaactttgtgtcctttgacccacag i calJac3.chr2 I 4 C 0 s saiBol1.JH378186 2225128 31 + 10068113 ------ctaactggaactttgtgt-ctttgaccctcag i saiBol1.JH378186 I 4 C 0 s cebCap1.NW_016107999v1 80436 32 - 709587 ------ctaactggaactttgtgtcctttgacccacag i cebCap1.NW_016107999v1 I 4 C 0 s aotNan1.NW_018501968v1 1180744 32 - 2246441 ------ctaactggaactttgtgtcctttgacccacag i aotNan1.NW_018501968v1 I 46 C 0 s otoGar3.GL873522 1250651 38 + 48283576 ccccccaccgctgacattttgtgatctttgaacctcct i otoGar3.GL873522 C 0 C 0 e mm10.chr13 66003697 3888 - 120421639 I e canFam3.chr4 37181392 0 + 88276631 C e proCoq1.NW_012152163v1 777847 2792 - 940639 I e dasNov3.JH562710 269990 194 - 960158 I a score=1667094.000000 s hg38.chr5_KI270795v1_alt 68739 153 + 131892 ctccccaattctcactccctgtcc-gccagcctctggtaaccaccattctactttctgcttcaatgaatttggctttttcagagttcgcctgtccatgtgagatcacgtggtatttgtttttctgtgtctggcttatttcactta--acatgtcct s panTro5.chr5 5318964 153 - 181907262 ctccccaattctcactccctgtcc-cccagcctctggtaaccaccattctactttctgcttcaatgaatttggctttttcagagttcgcatgtccatgtgagatcacgtggtatttgtttttctgtgtctggcttatttcactta--acatgtcct i panTro5.chr5 C 0 C 0 s panPan2.chr5 5581387 153 - 183735486 ctccccaactctcactccctgtcc-cccagcctctggtaaccaccattctactttctgcttcaatgaatttggctttttcagagttcgcatgtccatgtgagatcacgtggtatttgtttttctgtgcctggcttatttcactta--acatgtcct i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1711251 153 + 3967317 ctccccaattctcactccctgtcc-cccagcctctggtaaccaccattctactttctgcttcaatgaatttggctttttcagagttcgcatgtccatgtgagatcacgtggtatttgtttttctgtgtctggcttatttcactta--acatgtcct i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4588042 153 + 163208435 ctccccaattctcactccctgccc-cccagcctctggtaaccaccattctactttctgcttcaatgaatttggctttttcagagtttgcatgtccatgtgagatcacatggtatttgtttttctgtgtctggcttatttcactta--acatgtcct i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5769437 154 - 180051392 ctccccagttctcaccccctgccctcccagcctctggtagccaccattctactttctgcttcaatgaatttggctttttcagagtttgcatgtccgtgtgagatcacatggtatttgtttttctgtgtctggcttatttcactta--acatgtcct i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5955361 154 - 181584905 ctccccagttctcaccccctgccctcccagcctctggtagccaccattctactttctgcttcaatgaatttggctttttcagagtttgcatgtccgtgtgagatcacatggtatttgtttttctgtgtctggcttatttcactta--acatgtcct i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 986019 154 - 16193990 ctccccagttctcaccccctgccctcccagcctctggtagccaccattctactttctgcttcaatgaatttggctttttcagagtttgcatgtccgtgtgagatcacatggtatttgtttttctgtgtctggcttatttcactta--acatgtcct i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1806646 154 - 21434487 ctccccagttctcaccccctgccctcccagcctctggcagccaccattctactttctgcttcaatgaatttggctttttcagagtttgcatgtccgtgtgagatcacatggtatttgtttttctgtgtctggcttatttcactta--acatgtcct i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4769054 154 - 82825804 ctccccagttctcaccccctgccctcccagcctctggtagccaccattctactttctgcttcaatgaatttggctttttcagagtttgcatgtccgtgtgagatcacgtggtatttgtttttctgtgtctggcttatttcactta--acatgtcct i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 275003 154 + 2521317 ctccccagttctcaccccctgccctcccagcctctggcagccaccattctactttctgcttcactgaattgggctttttcagagtttgcatgtccgtgtgagatcacatggtatttgtttttctgtgtctggcttatttcactta--acacgtcct i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1756709 154 - 2415367 ctccccagttctcaccccctgccctcccagcctctggtagccaccattctactttctgcttcaatgaatttggctttttcagagtttgcatgtccatgtgagatcacgtggtatttgtttttctgtgtctggcttatttcactta--acatgtcct i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64100394 150 + 204313951 ctccccagtcctcaccct--gccc--tcagcctctggtacccaccactctactctctgcttcgatgaatttggctttttcagatttcacatgtccatgtgacatcacgtggtatttgtttttctgtgtctggcttatttcactta--gcatgtcct i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2225159 150 + 10068113 ctccccggtcctcagccc--gccc--tcagcctctggtacccaccactctactttctgcttcgatgaatttggctttttcagatttcacatgtccatgtgacatcacgtggtatttgtttttctgtgtttggcttatttcactta--gcatgtcct i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 80468 150 - 709587 ctccccagtcctcacccc--gccc--tcagtctctggtaacccccactctactttctgcttagatgaatttggctttttcagatttcacatgtccatgtgacatcacgtggtatttgtttttctgtgtctggcttattttactta--gcatgtcct i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1180776 150 - 2246441 ctccccagtcctcacccc--gccc--tcagcctctggtacccaccactctactttctgcttcgatgaatttggctttttcagatttcacatgtccatgtgacatcacgtggtatttgtttttctgtgtctggcttatttcactta--gcatgtcct i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1250689 139 + 48283576 ctctcccatccccatccc-tgccc--------cctggtaaccaca--tctcctctctgcttctgggaatctgacattttcagatttcgcatataaatgtgagatcatgtggtgtttgcttttctggg------ttatttcacttaatatatgtcct i otoGar3.GL873522 C 0 C 0 s mm10.chr13 66007585 141 - 120421639 ctctctttccctccctccctctcc-ctctatccct-----ccctccctctcttctctccttccttt--tttgacattctcagattctacatataaatgtgataatgtgtgacatttgcctttctgtgtc-agctcatttctcttt--acatg---- i mm10.chr13 I 3888 C 0 e canFam3.chr4 37181392 0 + 88276631 C e proCoq1.NW_012152163v1 777847 2792 - 940639 I e dasNov3.JH562710 269990 194 - 960158 I a score=4199352.000000 s hg38.chr5_KI270795v1_alt 68892 377 + 131892 tgaaattcaaacctaac-g---ggcatcctgcctttttgtttgtgaaatctggccaccctaG----CTGT-gg-cctctacaagactttggctttactctgagatggaagtcactggaagctttggg---gtgcaggagagacggggcgtgaccagttttaaaggg---------tcctgg-------ggcgtgagcg-gac--tgtggctggcaa-------ggg---ggg-------------gag--c---cgctg--------gaggtgagaggtggga--------------tggaggc-tcc--------aggaggcagtgtgcaggtgctgagg-ggagtctgcatgtgttttgaagac--agctgaccccatttgctaatgggttggttgtgggatggcag------gtgggggacatgg--aggactccaaggcttttggcctgagcaacc-gat---------aagatt---------gcaggaggat s panTro5.chr5 5319117 378 - 181907262 tgaaattcaaacctaac-g---ggcatcctgcctttttgtttgtgaaatctggccaccctaG----CTGT-gg-cctctacaagactttggctttactctgagatggaagtcactggaagctttggg---gtgcaggagagacggggcgtgaccagttttaaaggg---------tcctgg-------ggtgtgagcg-gac--tgtggctggcaag------ggg---ggg-------------gag--c---cgctg--------gaggtgagaggtggga--------------tggaggc-gcc--------aggaggcagtgtgcaggtgctgagg-ggagtctgcgtgtgttttgaagac--agctgaccccatttgctaatgggttggttgtgggatggcag------gtgggggacatgg--aggactccaaggcttttggcctgagcaacc-gat---------aagatt---------gcaggaggat i panTro5.chr5 C 0 I 10 s panPan2.chr5 5581540 378 - 183735486 tgaaattcaaacctaac-g---ggcatcctgcctttttgtttgtgaaatctggccaccctaG----CTGT-gg-cctctacaagactttggctttactctgagatggaagtcactggaagctttggg---gtgcaggagagacggggcgtgaccagttttaaaggg---------tgctgg-------ggtgtgagcg-gac--tgtggctggcaag------agg---ggg-------------gag--c---cgctg--------gaggtgagaggtggga--------------tggaggc-gcc--------aggaggcagtgtgcaggtgctgagg-ggagtctgcgtgtgttttgaagac--agctgaccccatttgctaatgggttggttgtgggatggcag------gtgggggacatgg--aggactccaaggcttttggcctgagcaacc-aat---------aagatt---------gcaggaggat i panPan2.chr5 C 0 I 12 s gorGor5.CYUI01015413v1 1711404 377 + 3967317 tgaaattcaaacctaac-g---ggcatcctgcctttttgtttgtgaaatctggccaccctaG----CTGT-gg-cctctacaagactttggctttactctgagatggaagtcactggaagctttggg---gtgcaggagagacggggcgtgaccagttttaaaggg---------tcctgg-------ggcgtgagcg-gac--tgtggctggcaa-------ggg---ggg-------------gag--c---cgctg--------gaggtgagaggtggga--------------tggaggc-gcc--------aggaggcagtgcgcaggtgctgagg-ggagtctgcgtgtgttttgaagac--agctgaccccatttgctaatgggttggttgtgggatggcag------gcgggggacatgg--aggactccaacgcttttggcctgagcaacc-gat---------aagatt---------gcaggaggat i gorGor5.CYUI01015413v1 C 0 I 15 s nomLeu3.chr2 4588195 393 + 163208435 tgaaattcaaacctaac-a---ggcatcctgcctttttgtttgtgaaatctggccaccctaG----CTGT-gg-cctccgtaagactttggctttactctgagatggaagccactggaagctttggg---gtacaagagagatggggcgtgaccagttttaaaggg---------tcctgg-------ggcgtgagcg-gac--tgtggctggcaa-------ggc---ggg-------------gag--c---cgctg--------gaggtgggaggtaggaggtaggaggtgggctgcaggt-gcc--------aggaggcagtatgcaggtgctgagg-ggagtctgcatgtgttttgaagacagagctggccccatttgctaatgggttggttgtgggatggcag------gtgggggacatgg--aggactccaaggcttttgtcctgagcaacc-gat---------aagatt---------gcaggaggat i nomLeu3.chr2 C 0 I 28 s rheMac8.chr6 5769591 387 - 180051392 tgaaattcaaacctaac-g---ggcatcctgcctttttgtttgtgaaatctgtccaccctaG----CTGT-gg-cctccctaagactttgactttactctgagatggaagccacgggaagctttggg---gtgcaggagagatgaggtgtgaccagttttaaaggg---------tcctgg-------gttgtgagca-gac--tgtggctggcaagggccgaagc---tgg-------------ggg--c---cactg--------gaggtgggaggtggaa--------------tggaggc-acc--------aggagggagtgtgcaggtgctgagg-ggagtctgtatgtgtttcgaagacagagctgaccccatttgctaatgcatttgttgtgggatgggaga-----gatggggacatgg--aggacttctgggcttttgacctgagcaacc-gga---------aagatt---------gcaggaggat i rheMac8.chr6 C 0 I 50 s macFas5.chr6 5955515 387 - 181584905 tgaaattcaaacctaac-g---ggcatcctgcctttttgtttgtgaaatctgtccaccctaG----CTGT-gg-cctccctaagactttgactttactctgagatggaagccacgggaagctttggg---gtgcaggagagatgaggtgtgaccagttttaaaggg---------tcctgg-------gttgtgagca-gac--tgtggctggcaagggccgaagc---tgg-------------ggg--c---cactg--------gaggtgggaggtggga--------------tggaggc-gcc--------aggagggagtgtgcaggtgctgagg-ggagtctgtatgtgtttcgaagacagagctgaccccatttgctaatgcatttgttgtgggatgggaga-----gatggggacatgg--aggacttctgggcttttgacctgagcaacc-gga---------aagatT---------GCAGGAGGAT i macFas5.chr6 C 0 I 50 s macNem1.NW_012018466v1 986173 387 - 16193990 tgaaattcaaacctaac-g---ggcatcctgcctttttgtttgtgaaatctgtccaccctaG----CTGT-gg-cctccctaagactttgactttactctgagatggaagccactggaagctttggg---gtgcaggagagatgaggtgtgaccagttttaaaggg---------tcctgg-------gttgtgagca-gac--tgtggctggcaagggccgaagc---tgg-------------ggg--c---cactg--------gaggtgggaggtggaa--------------tggaggc-acc--------aggagggagtgtgcaggtgctgagg-ggagtctgtatgtgtttcgaagacagagctgaccccatttgctaatgcatttgttgtgggatgggaga-----gatggggacatgg--aggacttctgggcttttgacctgagcaacc-gga---------aagatt---------gcaggaggat i macNem1.NW_012018466v1 C 0 I 22 s cerAty1.NW_012007035v1 1806800 387 - 21434487 tgaaattcaaacctaac-g---ggcatcctgcctttttgtttgtgaaatctgtccaccctaG----CTGT-gg-cctccctaagactttgactttactctgagatggaagccactggaagctttggg---gtgcaggagagatgaggtgtgaccagttttaaaggg---------tcctgg-------gtcgtgagca-gac--tgtggctggcaagggccgaagc---tgg-------------ggg--c---cactg--------gaggtgggaggtggga--------------tggaggc-gcc--------aggagggagtgtgcaggtgctgagg-ggagtctgtatgtgtttcgaagacagagctgaccccatttgctaatgcatttgttgtgggatgggaga-----gatggggacatgg--aggacttctgggcttttcacctgagcaacc-gga---------aagatt---------gcaggaggat i cerAty1.NW_012007035v1 C 0 I 28 s chlSab2.chr23 4769208 387 - 82825804 tgaaattcaaacctaac-g---ggcatcctgcctttttgtttgtgaaatctgtccactctaG----CTGT-gg-cctccctaagactttggctttactctgagatggaagccactggaagctttggg---gtgcaggagagatgaggtgtgaccagttttaaaggg---------tcctgg-------gtcgagagca-gac--tgtggctggcaagggccgaagc---tgg-------------ggg--c---cactg--------gaggtgggaggtggga--------------tggaggc-gcc--------aggaggcagtgtgcaggtgctgacg-ggagtctgtatgtgtttcgaagacagaactgaccccatttgctaatgcatttgttgggggatgggaga-----ggtggggacatgg--aggacttctgggcttttgacccgagcaacc-gga---------aagatT---------GCAGGAGGAT i chlSab2.chr23 C 0 I 12 s manLeu1.NW_012103943v1 275157 387 + 2521317 tgaaattcaaacctaac-g---ggcatcctgcctttttgtttgtgaaatctgtccaccctaG----CTGT-gg-cctccctaagactttgactttactctgagatggaagccactggaagctttgga---gtgcagaagagatgaggtgtgaccagttttaaaggg---------tcttgg-------gtcgtgagca-gac--tgtggctggcaagggccgaagc---tgg-------------ggg--c---cactg--------gaggtgggaggtggga--------------tggaggc-gcc--------aggagggagtgtgcaggtgctgagg-ggagtctgtatgtgtttcgaagacagagctgaccccatttgctaatgcatttgttgtgggatgggaga-----gatggggacatgg--aggacttctgggcttttgacctgagcaacc-gga---------aagatt---------gcaggaggat i manLeu1.NW_012103943v1 C 0 I 50 s colAng1.NW_012115755v1 1756863 387 - 2415367 tgaaattcaaacctagt-g---ggcatcctgccattttgtttgtgaaatctgtccactctaG----CTGT-gg-cctccctaagactttggctttactctgagatggaagccactggaagctttggg---gtacaggagagatgaggtgtgaccagttttaaaggg---------tcctgg-------gtcgtgagca-gag--tgtagctggcaagagccgaagc---tgg-------------gga--c---cactg--------gaggtgagaggtggga--------------tggaggc-gcc--------aggaggcagtgtgcaggtgctgagg-ggagtctgtttgtgttttgaagacagagctgaccccatttgctaatgcatttgttgtgggatgggaga-----ggtggggacatgg--aggatttctgggcttttgacccgagcaacc-gga---------aagact---------gcgggaggat i colAng1.NW_012115755v1 C 0 I 34 s calJac3.chr2 64100544 392 + 204313951 tgaaattcaAACCTAAA-G---GGCATCCTGCCTTTTTGTTTGTGAGATCTGGTCACCCTCA----TTGT-GG-TCTCCCTagggctttggcttgattctgagatggaagccactggagactttggg---gtgcaggaaagactgggcatgaccagttttaaaggg---------tcctgg-------gttgtgagca-gactgtgtggctggcaagggctgaagt---ggg-------------ggg--cgtgtgctg--------gaggtgggaggtggga--------------cagagtc-gcc--------aggaggtaatgtgcaggtgctgagg-ggagtctgtgtgtgttttgaagacagagctgaccccatttgctaatgagttggttgtgggatgggagag----gaggggt-catgg--aggattccagggctttgagcctgagcaacc-aga---------aagatt---------gcaggaggat i calJac3.chr2 C 0 I 84 s saiBol1.JH378186 2225309 394 + 10068113 taaaattcgaacctaaa-g---ggcatcctgcctttttgtttgtgagatctggccaccctCG----TTGT-GG-ACTCCCTagggctttggctggattctgagatggaagccactggaggctttggg---gtgcaggagagactgggtgtgaccagttttaaaggg---------tcctgg-------gttgtgagca-gac--tgtggctggcaagggctgaagttggggg-------------ggt--ggtgcgctg--------gaggtgggaggtggga--------------cagaggc-gcc--------aggaggtaatgtgcaggtgttgagg-cgagtctgtgtgtgttttgaagacagagctgaccccacttgctaatgggttggttgtgggatgggagag----gagggggacatgg--aggattccagggctttgagcctgagcaacc-aga---------aagatT---------GCAGGAGAAT i saiBol1.JH378186 C 0 I 790 s cebCap1.NW_016107999v1 80618 393 - 709587 tgaaattcaAACCTAAA-G---GGCATCCTGCCTTTTTGTTTGTGAGATCTGACCACCCTCG----CCGT-GG-ACTCCCTagggctttggcttgattctgagatggaagccactggaggctttggg---gtgcaggagagactgggtgtgaccagttttaaaggg---------tcctgg-------gttgtgaaca-gac--tgtggctggcaagggctgaagt-ggggg-------------ggg--ggtgcgctg--------gaggtgggaggtggga--------------cagaggc-gcc--------aggaggtaatgtgcaggtgctgagg-ggagtctgtgtgtgttttgaagacagagctgaccccacttgctaatgggttggttgtgggatgggagag----gagggggacatgg--aggattccagggctttgagcctgagcagcc-aga---------aagatT---------GCAGGAGGAT i cebCap1.NW_016107999v1 C 0 I 6 s aotNan1.NW_018501968v1 1180926 391 - 2246441 tgaaattcaAACCTAAA-G---GGCATCCTGCCTTTTTGTTTCTGAGATCTGGCCACCCTCG----ttgt-gg-tctctctagggctttggcttgattctgagatagaagccactgaaggctttggg---gtgcagaagagactgggtgtgaccagttttaaaggg---------tcctgg-------gttgtgagca-gag--tgtggctggcaaaggctgaagt---ggg-------------ggg--catgcgctg--------gaggtgggaggtggga--------------cagaggc-gcc--------aggaggtaatgtacaggtgctgagg-ggagtctgtgtgtgttttgaagacagagctgaccccatttgctaatgggttggttgtgggatgggagag----gagggggacatgg--aggattccagggctttgagtctgagcaacc-aga---------aagatT---------GCAGGAGGAT i aotNan1.NW_018501968v1 C 0 I 453 s otoGar3.GL873522 1250828 313 + 48283576 tgaaattcaAATTTAAC-ATTTGAAATTTAGCATTTGTATTTACTAAATTTGGTCAC-CTAG----TCATGGG-CCTCGGTAAGACTCTGGCTTCATGCTGAGAAGGAAGCCTCTG------------------------GACAGGATGGGGCCAGTCTTAAAGGG------GTCCTCTGG-------GT-----GCAGGGT--Tgtggctaactagggcagaagg---gtc-------------aaa--g---tgctg-------------agcagttgggg-----------------------------------------------------------------------tattttgaagacagagctggccccacctgctatggggctggctgtggggtggaag------gagggg--tgtca--aggactccagggatttgggcctgagcaact-gga---------aagatc---------acaggaggag i otoGar3.GL873522 C 0 I 2 s mm10.chr13 66007726 373 - 120421639 ---aATTTAAGT------G---GGCATCCTGATATTTAGTTT------------CTTTTTAG----TTTT-G----------AGATTTTGGCTTTGCTCCGAAATGGAAGCTCCTGGAAGGTGTGAGACCGAGTGGAAGGGATAGGATCACAGATACCCTCCAGGA---------ACTT---------GTCATGCACA-GGT--CTT--CAAGCAAAGACAGAAGC---CTGCTTT---------GTA--A---CTTTG--------CCGATCAGGAATGGAA---------------GGAGCC-ACCGTCAGAGAAGGAAGCACTgtggaaatgctga---agagtcttgacgtgtttagaaaacagagctgagtccatgtgttagctgatcagctgtgggttgggagagaaa-aagggtggtttgaataggactccagggattttggcttgagcatctggga---------aagaCT---------GCAAGGAGAA i mm10.chr13 C 0 I 5 s canFam3.chr4 37181392 404 + 88276631 tgaaatacaaatttaactg---tgtgtcctgtattttcatttgctaaatttagccaccctagtgttttgc-tt-tctctctaagtctttggcttgactttgagatagaagccgctgaaggatttgga---gcggaggagggacaggatgtgatcaattttaaaggg------atcttctgggtgctatgttgtgacca-gac--tgcagtaggcatgggcagaagc---tgg-------------ggggcc---catgg--------taggtgagagatgggg----------------------gcc---------------agtgtggaagtgctgagg-gggcaccagacatgtttggaagatggaggggaccccatttgctaatgggttggttgcggggtggcagagaaagagaggagtcaaag--aagagtcaatggcttttggcctgagcaact-gga---------aatactaagacaatggcaggagatg i canFam3.chr4 C 0 I 14 s dasNov3.JH562710 270184 427 - 960158 tgaaattcaaattgaactg---ggcatcctatatttttatttgctaaatctggtgcctctac----ttgg-ggattttcataagatgttggctttgctttgaggtggaagccactggagagttctga---g-----------caggatctgactagttttaaagggatcctcatcctctggctgctatgttgtgaata-gac--ta---ccgggtaaggcagaagc---tggagttcccattcagaga--c---tactgcaacagtccaggtgagagaaggga--------------tgggggcagct--------gggtggcagggtggggttgccgaggaggactctggatgtggtttgaaactaga-tggacaccatttgctaatggtttgcacatggggagggagagaaacagagtagtcgagg--atgacccctgggttttcagcccaagcaact-ggaaacattgagaaggtt---------gcaggaggag i dasNov3.JH562710 I 194 I 36 e proCoq1.NW_012152163v1 777847 2792 - 940639 I a score=341456.000000 s hg38.chr5_KI270795v1_alt 69269 33 + 131892 tgtgtgtgt----gtgttc----------------gcgtgtgct--tttg--------------------------------------------------------gacac s panTro5.chr5 5319505 33 - 181907262 tgtgtgtgt----gtgttc----------------gcgtgtgct--tttg--------------------------------------------------------gacac i panTro5.chr5 I 10 C 0 s panPan2.chr5 5581930 33 - 183735486 tgtgtgtgt----gtgttc----------------gcgtgtgct--tttg--------------------------------------------------------gacac i panPan2.chr5 I 12 C 0 s gorGor5.CYUI01015413v1 1711796 33 + 3967317 tgtgtgtgt----gtgttc----------------gcgtgtgct--tttg--------------------------------------------------------gacac i gorGor5.CYUI01015413v1 I 15 C 0 s nomLeu3.chr2 4588616 33 + 163208435 tgtgtgtgt----gtgttc----------------acgtgtgct--tttg--------------------------------------------------------gacac i nomLeu3.chr2 I 28 C 0 s rheMac8.chr6 5770028 33 - 180051392 tgtgtgtgt----gtgttc----------------gcgtgtgct--tttg--------------------------------------------------------gacac i rheMac8.chr6 I 50 I 2 s macFas5.chr6 5955952 33 - 181584905 tgtgtgtgt----gtgtTC----------------GCGTGTGCt--tttg--------------------------------------------------------gacac i macFas5.chr6 I 50 I 2 s macNem1.NW_012018466v1 986582 33 - 16193990 tgtgtgtgt----gtgttc----------------gcgtgtgct--tttg--------------------------------------------------------gacac i macNem1.NW_012018466v1 I 22 I 2 s cerAty1.NW_012007035v1 1807215 33 - 21434487 tgtgtgttt----gtgttc----------------gcgtgtgct--tttg--------------------------------------------------------gacac i cerAty1.NW_012007035v1 I 28 I 2 s chlSab2.chr23 4769607 33 - 82825804 tgtgtgtgt----gtgtgc----------------acgtgtgCt--tttg--------------------------------------------------------gacac i chlSab2.chr23 I 12 I 2 s manLeu1.NW_012103943v1 275594 33 + 2521317 tgtgtgtgt----gtgttc----------------acgtgtgct--tttg--------------------------------------------------------gacac i manLeu1.NW_012103943v1 I 50 I 2 s colAng1.NW_012115755v1 1757284 33 - 2415367 tgtgtgtgt----gtgttt----------------gcatgtgct--tttg--------------------------------------------------------gacac i colAng1.NW_012115755v1 I 34 I 2 s calJac3.chr2 64101020 33 + 204313951 tgtgtgtgt----gtgttt----------------gcatgtggt--tctg--------------------------------------------------------aacac i calJac3.chr2 I 84 I 2 s saiBol1.JH378186 2226493 33 + 10068113 tgtgtgtgt----gtgtgt----------------gtgtgtggt--tctg--------------------------------------------------------gacac i saiBol1.JH378186 I 790 I 2 s cebCap1.NW_016107999v1 81017 33 - 709587 tgtgtgtgt----gtgttt----------------gcgtgtgGT--TCTG--------------------------------------------------------GACAC i cebCap1.NW_016107999v1 I 6 I 440 s otoGar3.GL873522 1251143 35 + 48283576 tgtgtgtgg----gtgttg----------------gggtggggtgatttg--------------------------------------------------------ggcac i otoGar3.GL873522 I 2 I 2 s mm10.chr13 66008104 93 - 120421639 TGTATACACCTCAATGTTA----------------AGGGATGCT--TGTGAGAGAGCAGGAGGGCACATGGAGTGGGtagctattgtctcttcattgctgtgaagagacac i mm10.chr13 I 5 I 52 s canFam3.chr4 37181810 33 + 88276631 tgtgtgtgt----gtgcat----------------gtgtgtgtg--cttg--------------------------------------------------------gacac i canFam3.chr4 I 14 C 0 s dasNov3.JH562710 270647 49 - 960158 tgtgtgtgt----gtgtgcatgcatgtgtgcatgtgtgtgtggc--tctg--------------------------------------------------------gacac i dasNov3.JH562710 I 36 C 0 e proCoq1.NW_012152163v1 777847 2792 - 940639 I e aotNan1.NW_018501968v1 1181317 453 - 2246441 I a score=486874.000000 s hg38.chr5_KI270795v1_alt 69302 48 + 131892 ggttcagagat----------------------------------gcccactggacaa-------ccaggag-----gaga-----------catgcag--------tgggca s panTro5.chr5 5319538 48 - 181907262 ggttcagagat----------------------------------gcccactggacaa-------ccaggag-----gaga-----------catgcag--------tgggca i panTro5.chr5 C 0 C 0 s panPan2.chr5 5581963 48 - 183735486 ggctcagagat----------------------------------gcccactggacaa-------ccaggag-----gaga-----------catgcag--------tgggca i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1711829 48 + 3967317 ggttcagagat----------------------------------gcccactggacaa-------ccaggag-----gaga-----------catgcag--------tgggca i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4588649 48 + 163208435 ggttcagagat----------------------------------gcccactggacaa-------ccaggag-----gaga-----------cgtgcag--------tgggca i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5770063 48 - 180051392 ggttcagagat----------------------------------gcccactggacaa-------ccaggag-----gaga-----------catgcag--------tgggca i rheMac8.chr6 I 2 I 17 s macFas5.chr6 5955987 48 - 181584905 ggttcagagat----------------------------------gcccactggacaa-------ccaggag-----gaga-----------catgcag--------tgggca i macFas5.chr6 I 2 I 17 s macNem1.NW_012018466v1 986617 48 - 16193990 ggttcagagat----------------------------------atccactggacaa-------ccagaag-----gaga-----------catgcag--------tgggca i macNem1.NW_012018466v1 I 2 I 17 s cerAty1.NW_012007035v1 1807250 48 - 21434487 ggttcagagat----------------------------------gcccactggacaa-------ccaggag-----gaga-----------catgcag--------tgggca i cerAty1.NW_012007035v1 I 2 I 17 s chlSab2.chr23 4769642 48 - 82825804 ggttcagagat----------------------------------gcccactggacaa-------ccaggag-----gaga-----------catgcag--------tgggca i chlSab2.chr23 I 2 I 17 s manLeu1.NW_012103943v1 275629 48 + 2521317 ggttcagagat----------------------------------gcccactggacaa-------ccaggag-----gaga-----------catgcag--------tgggca i manLeu1.NW_012103943v1 I 2 I 17 s colAng1.NW_012115755v1 1757319 48 - 2415367 ggttcagagat----------------------------------gcccactggacaa-------ccaggag-----gaga-----------catgcag--------tgggca i colAng1.NW_012115755v1 I 2 I 17 s calJac3.chr2 64101055 47 + 204313951 ggttaagagat----------------------------------gcctactggacaa--------caggag-----gaga-----------catgccg--------tgggca i calJac3.chr2 I 2 I 17 s saiBol1.JH378186 2226528 47 + 10068113 ggttcagagat----------------------------------gcctactggacag--------caggag-----gaga-----------cgtgcag--------tgggca i saiBol1.JH378186 I 2 I 17 s cebCap1.NW_016107999v1 81490 47 - 709587 ggttcagagat----------------------------------gcctactggacaa--------caggag-----gaga-----------cctgcag--------tgggca i cebCap1.NW_016107999v1 I 440 I 17 s otoGar3.GL873522 1251180 47 + 48283576 cattaagagat----------------------------------gcccacaagagac-------ccagg-g-----gagg-----------catggag--------tagaca i otoGar3.GL873522 I 2 I 17 s mm10.chr13 66008249 105 - 120421639 ggttctgaggttcagtctgttatcatcatgactggaagcatcttggcatgcaggtaaatgtggtgccaggaactgctgagagttctacatcttattcag--------aaggca i mm10.chr13 I 52 I 35 s canFam3.chr4 37181843 56 + 88276631 attgttaagat----------------------------------acctactcttcaa-------ccaagaa-----gaga-----------tatccaggacatgcttggaca i canFam3.chr4 C 0 I 9 s dasNov3.JH562710 270696 47 - 960158 -attgttaagt----------------------------------gccttctagactc-------ccaggag-----gtta-----------catggtg--------tgggca i dasNov3.JH562710 C 0 C 0 e proCoq1.NW_012152163v1 777847 2792 - 940639 I e aotNan1.NW_018501968v1 1181317 453 - 2246441 I a score=5274118.000000 s hg38.chr5_KI270795v1_alt 69350 538 + 131892 -----------------ggagttcagagagaa--------------ctc---------------------------------------------------------------------------attcat-----------------------------------tcgt--catcagcttggatgtca------tttagag-------------------------ctgagc---acct--------------gcccgagggca------------------------------------------------gaggaggtg---------tgtaggta---------------gagaagcagccctactcca-a-catctgcagagg--cctggag-g-------------------------------------------------------------ctgg-------------------aaggccctggtg----------cacactgatagtca-------------------ggc-----cc-----atgtagtgtgggaaatgagaccggcatggcctgga-------------------------g-g-cagagagagccatgaggagttccaagaaggggagtgac-tagtcagatgTGTGTGTTTTAGAAGGGTGCCTCCGGGGCAGGGTGGA-GGGG------ATGGAGC-AAGGCCAGGAGGGCAGAAAGGG----GACTGTGGCACC--------------------AGCCC-------------------TGCCCCAGCACAGCAGCC-GGGGAC-------------------------------------------TTGGTGGGG--GGTGG----TGC------AG--GGAGACACAAGGGAGGGT-GGTTTGTGTGTGGCGCTGCGGACAGGG------CTGGGCAGCAGGATGGATGTGG----------GGTGCAGG------------AGGAC------------------------------------GG------------------------CTGGGG--------GCAGAGAGAGAG----GCTTTTGAATTTGCCTCAGAGGAGTGCAGGGTG--TCCCCA-CCCCA-CCCCCAGCAGCCCA s panTro5.chr5 5319586 538 - 181907262 -----------------ggagttcagagagaa--------------ctc---------------------------------------------------------------------------attcat-----------------------------------tcgt--catcagcttggatgtca------tttagag-------------------------ctgagc---acct--------------gcccgagggcg------------------------------------------------gaggaggtg---------tgtaggta---------------gagaagcagccctactcca-a-catctgcagagg--cctggag-g-------------------------------------------------------------ctgg-------------------aaggccctggtg----------cacactgatggtca-------------------ggc-----cc-----aggtagtgtgggaaatgagactagcatggcctgga-------------------------g-g-cagacagagccatgaggagttccgagaaggggagtgac-tagtcagatgTGTGTGTTTTAGAAGGGTGCCTCCGGGGCAGGGTGGA-GGGG------ATGGAGC-AAGGCCAGGAGGGCAGAAAGGG----GACTGTGGCACC--------------------AGCCC-------------------TGCCCCAGCACAGCAGCC-GGGGAC-------------------------------------------TTGGTGGGG--GGTGG----TGC------AG--GGAGACACAAGGGAGGGT-GGTTTGTGTGTGGCGCTGCGGACAGGG------CTGGGCAGCAGGATGGATGTGG----------GGTGCAGG------------AGGAC------------------------------------GG------------------------CTGGGG--------GCAGAGAGAGAG----GCTTTTGAATTTGCCTCAGAGGAGTGCAGAGTG--TCCCCA-CCCCA-CCCCCAGCAGCCCA i panTro5.chr5 C 0 C 0 s panPan2.chr5 5582011 542 - 183735486 -----------------ggagttcagagagaa--------------ctc---------------------------------------------------------------------------attcat-----------------------------------tcgt--catcagcttggatgtca------tttagag-------------------------ctgagc---acct--------------gcccaagggcg------------------------------------------------gaggaggtg---------tgtaggta---------------gagaagcagccctactcca-a-catctgcagagg--cctggag-g-------------------------------------------------------------ccgg-------------------aaggccctggtg----------cacactgatggtca-------------------ggc-----cc-----aggtagtgtgggaaatgagactagcatggcctgga-------------------------g-g-cagaccgagccatgaggagttccgagaaggggagtgac-tagtcagctgtgtGTGTTTTAGAAGGGTGCCTCCGGGGCAGGGTGGA-GGGG------ATGGAGC-AAGGCCAGGAGGGCAGAAAGGG----GACTGTGGCACC--------------------AGCCC-------------------TGCCCCAGCACAGCAGCC-GGGGAC-------------------------------------------TTGGTGGGG--GGTGGTGGCTGC------AG--GGAGACACAAGGGAGGGT-GGTTTGTGTGTGGCGCTGCGGACAGGG------CTGGGCAGCAGGATGGATGTGG----------GGTGCAGG------------AGGAC------------------------------------GG------------------------CTAGGG--------GCAGAGAGAGAG----GCTTTTGAATTTGCCTCAGAGGAGTGCAGAGTG--TCCCCA-CCCCA-CCCCCAGCAGCCCA i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1711877 536 + 3967317 -----------------gGAGTTCAGAGAGAA--------------CTC---------------------------------------------------------------------------ATTCAT-----------------------------------TCGT--CATCAGCTTGGATGTCA------TTTAGAG-------------------------CTGAGC---ACCT--------------GCCCAAGGGCG------------------------------------------------GAGGAGGTG---------TGTAGGTA---------------GAGAAGCAGCCCTACTCCA-A-CATCTGCAGAGG--CCTGGAG-G-------------------------------------------------------------CTGG-------------------AAGGCCCTGGTG----------CACACTGATGGTCA-------------------GGC-----CC-----AGGTAGTGTGGGAAATGAGACCCGCATGGCCTGGA-------------------------G-G-CAGACAGAGCCATGAGGAGTTCCGAGAAGCGGAGTGAC-TAGTCAGATGTGTGTGTTTTAGAAGGGTGCCTCCGGGGCAGGGTGGA-GGGG------ATGGAGC-AAGGCCAGGAGGGCAGAAAGGG----GACTGTGTCACC--------------------AGCCC-------------------TGCCCCAGCACAGCAGCC-GGGGAC-------------------------------------------TTGGTGGGG--GGTGG----TGC------AG--GGAGACACAAGGGAGGGT-GGTTTGTGTGTGGCGCTGCGGACAGGG------CTGGGCAGCAGGATGGATGTGG----------GGTGCAGG------------AGGAC------------------------------------GG------------------------CTGGGG--------GC--AGACAGAG----GCTTTTGAATTTGCCTCAGAGGAGTGCAGAGTG--TCCCCA-CCCCA-CCCCCAGCAGCCCA i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4588697 534 + 163208435 -----------------ggagttcagagagaa--------------ctc---------------------------------------------------------------------------attcat-----------------------------------tcgt--catcagcttggatgtca------tttagag-------------------------ctgagc---acct--------------gcccgagggtg------------------------------------------------gaggaggtg---------tgtaggtg---------------gagaagcagctgtactcca-a-catctgcagagg--cctggag-g-------------------------------------------------------------ctgg-------------------aaggccctggtg----------aacactgatggtca-------------------ggc-----cc-----aggtagtgtgggaaatgagactggcatggcctgga-------------------------g-g-caga--gagccatgaggagttccgagaaggggagtgac-tagtcagatgTGTGTGTTTTAGAAGGGTGCCTCCTGGGCAGGGTGGA-GGGG------ATGGAGC-AAGGCCAGGAGGGCAGAAAAGG----GACTGTGGCACC--------------------AGCCC-------------------TGCCCCAGGACAGCAGCC-AGGGAC-------------------------------------------TTGGTGGGG--GGTGG----TTC------AG--GGAGACAAAAGGGAGGGT-GGTTTGTGTGTGGCGCTGCGGACAGGG------CTGGGTAGCAGGATGGATGTGG----------GGTGCAGG------------AGGAC------------------------------------GG------------------------CTGGGG--------GCAGAGAGAGAG----GCTTTTGTATTTGCCTCAGAGGAGTGCA--GTG--TCCCCA-CCCCA-CCCCCAGCAGCCCA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5770128 536 - 180051392 -----------------ggagttcagagAGAA---------------TC---------------------------------------------------------------------------ATTCAT-----------------------------------TCGT--CATCAGCTCAGATGTCA------TTTAGAG-------------------------CTGAGC---ACCT--------------GCCCAA-GGCG------------------------------------------------GAGGAGGTG---------TGTAGGTA---------------GGGAAGCAGCCCTACTCCA-A-CATCTGCAGAGG--CCTGGAG-G-------------------------------------------------------------CTGG-------------------AAGGCCCTGGTG----------AACACTGATGGTCA-------------------GGC-----CC-----AGGTGGTGTGGGAAATGAGACTGGCATGGCCTGGA-------------------------G-G-CAGA--GAGCCATGAGGAGTGCTGAGAAGGGGAGTGACATAGTCAGATGTGTGTGTTTTAGAAGGGTGCCTCCGGGGCAGGGTGGA-GGGG------ATGGAGC-GAGGCCAGGAGGGCAGAAAGGG----GACTGTGGCACC--------------------AGCCC-------------------TGCCCCAGGACAGCAACC-GGGGAC-------------------------------------------TTGGTGGGGACGGTG-----TGC------AG--GGAGACAGAAGGGAGGGT-GGTTTGTGTGTGGCGCTGCGGACAGCA------CTGGGCAGCAGGATGGATGTGG----------GGTGCAGG------------AGGAC------------------------------------AG------------------------CTGGGG--------GCAGAGAGAGAG----GCTTTTGTATTTGCCTCAGAGGAGTGCAGAGTG--TCCCCA-CCCCA-CCCCCAGCAGCCCA i rheMac8.chr6 I 17 C 0 s macFas5.chr6 5956052 536 - 181584905 -----------------ggagttcagagagaa---------------tc---------------------------------------------------------------------------attcat-----------------------------------tcgt--catcagctcagatgtca------tttagag-------------------------ctgagc---acct--------------gcccaa-ggcg------------------------------------------------gaggaggtg---------tgtaggta---------------gggaagcagccctactcca-a-catctgcagagg--cctggag-g-------------------------------------------------------------ctgg-------------------aaggccctggtg----------aacactgatggtca-------------------ggc-----cc-----aggtggtgtgggaaatgagactggcatggcctgga-------------------------g-g-caga--gagccatgaggagtgctgagaaggggagtgacatagtcagatgtgtGTGTTTTAGAAGGGTGCCTCCGGGGCAGGGTGGA-GGGG------ATGGAGC-GAGGCCAGGAGGGCAGAAAGGG----GACTGTGGCACC--------------------AGTGC-------------------TGCCCCAGGACAGCAACC-AGGGAC-------------------------------------------TTGGTGGGGACGGTG-----TGC------AG--GGAGACAGAAGGGAGGGT-GGTTTGTGTGTGGTGCTGCGGACAGGG------CTGGGCAGCAGGATGGATGTGG----------GGTGCAGG------------AGGAC------------------------------------GG------------------------CTGGGG--------GCAGAGAGAGAG----GCTTTTGTATTTGCCTCAGAGGAGTGCAGAGTG--TCCCCA-CCCCA-CCCCCAGCAGCCCA i macFas5.chr6 I 17 C 0 s macNem1.NW_012018466v1 986682 535 - 16193990 -----------------ggagttcagagAGAA---------------TC---------------------------------------------------------------------------ATTCAT-----------------------------------TCGT--CATCAGCTCAGATGTCA------TTTAGAG-------------------------CTGAGC---ACCT--------------GCCCAA-GGCG------------------------------------------------GAGGAGGTG---------TGCAGGTA----------------GGAAGCAGCCCTACTCCA-A-CATCTGCAGAGG--CCTGGAG-G-------------------------------------------------------------CTGG-------------------AAGGCCCTGGTG----------AACACTGATGGTCA-------------------GGC-----CC-----AGGTGGTGTGGGAAATGAGACTGGCATGGCCTGGA-------------------------G-G-CAGA--GAGCCATGAGGAGTGCTGAGAAGGGGAGTGACATAGTCAGATGTGTGTGTTTTAGAAGGGTGCCTCCGGGGCAGGGTGGA-GGGG------ATGGAGC-GAGGCCAGGAGGGCAGAAAGGG----GACTGTGGCACC--------------------AGCCC-------------------TGCCCCAGGACAGCAACC-GGGGAC-------------------------------------------TTGGTGGGGACGGTG-----TGC------AG--GGAGACAGAAGGGAGGGT-GGTTTGTGTGTGGCGCTGTGGACAGCG------CTGGGCAGCAGGATGGATGTGG----------GGTGCAGG------------AGGAC------------------------------------GG------------------------CTGGGG--------GCAGAGAGAGAG----GCTTTTGTATTTGCCTCAGAGGAGTGCAGAGTG--TCCCCA-CCCCA-CCCCCAGCAGCCCA i macNem1.NW_012018466v1 I 17 C 0 s cerAty1.NW_012007035v1 1807315 536 - 21434487 -----------------ggagttcagagagaa---------------tc---------------------------------------------------------------------------attcat-----------------------------------tcgt--catcagctcagatgtca------tttagag-------------------------ctgagc---acct--------------gcccaa-ggcg------------------------------------------------gaggaggtg---------tgtaggta---------------gagaagcagccctactcca-a-catctgcagagg--cctggag-g-------------------------------------------------------------ctgg-------------------aaggccctggtg----------aacactgatggtca-------------------ggc-----cc-----aggtggtgtgggaaatgagactggcatggcctgga-------------------------g-g-caga--gagccatgaggagagctgagaaggggagtgacatagtcagatgtgtGTGTTTTAGAAGGGTGCCTCCGGGGCAGGGTGGA-GGGG------ATGGAGC-GAGGCCAGGAGGGCAGAAAGGG----GACTGTGGCACC--------------------AGCCC-------------------TGCCCCAGGACAGCAGCC-GGGGAC-------------------------------------------TTGGTGGGGACGGTG-----TGC------AG--GGAGACAGAAGGGAGGGT-GGTTTGTGTGTGGCGCTGCGGACAGCG------CTGGGCAGCAGGATGGATGTGG----------GGTGCAGG------------AGGAC------------------------------------GG------------------------CTGGGG--------GCAGAGAGAGAG----GCTTTTGTATTTGCCTCAGAGGAGTGCAGAGTG--TCCCCA-CCCCA-CCCCCAGCAGTCCA i cerAty1.NW_012007035v1 I 17 C 0 s chlSab2.chr23 4769707 536 - 82825804 -----------------ggagttcagagAGAA---------------TC---------------------------------------------------------------------------ATTCGT-----------------------------------TCGT--CATCAGCTCGGATGTCA------TATAGAG-------------------------CTGAGC---ACCT--------------GCCCAA-GGCG------------------------------------------------GAGGAGGTG---------TGTAGGTA---------------GAGAAGCAGCCCTACTCCA-A-CATCTGCAGAGG--CCTGGAG-G-------------------------------------------------------------CTGG-------------------AAGGCCCTGGTG----------AACAATGATGGTCA-------------------GGC-----CC-----AGGTGGTGTGGGAAATGAGACTGGCATGGCCTGGA-------------------------G-G-CAGA--GAGCCACGAGCAGTTCTGGGAAGGGGAGTGACATAGTCAGATGTATGTGTTTTAGAAGGGTGCCTCCAGGGCAGGGTGGA-GGGG------ATGGAGC-GAGGCCAGGAGGGCAGAAAGGG----GACTGTGGCACC--------------------AGCCC-------------------TGCCCCAGGACAGCAACC-AGGGAC-------------------------------------------TTGGTGGGGACGGTG-----TGC------AG--GGAGACAGAAGGGAGGGT-GGTTTGTGTGTGGCGCTGCGGACAGGG------CTGGGCAGCAGGATGGATGTGG----------GGTGCAGG------------AGGAC------------------------------------GG------------------------CTGGGG--------GCAGAGAGAGAG----GCTTTTGTATTTGCCTCAGAGGAGTGCAGAGTG--TCCCCA-CCCCA-CCCCCAGCAGCCCA i chlSab2.chr23 I 17 C 0 s manLeu1.NW_012103943v1 275694 536 + 2521317 -----------------ggagttcagagAGAA---------------TC---------------------------------------------------------------------------ATTCAT-----------------------------------TCGT--CATCAGCTCAGATGTCG------TTTAGAG-------------------------CTGAGC---ACCT--------------GCCCAA-GGCG------------------------------------------------GAGGAGGTG---------TGTAGGTA---------------GAGAAGCAGCCCTACTCCA-A-CATCTGCAGAGG--CCTGGAG-G-------------------------------------------------------------CTGG-------------------AAGGCCCTGGTG----------AACACTAATGGTCA-------------------GGC-----CC-----AGGTGGTGTGGGAAATGAGACTGGCATGGCCTGGA-------------------------G-G-CAGA--GAGCCATGAGGAGTGCTGAGAAGGGGAGTGACATAGTCAGATGTGTGTGTTTTAGAAGGGTGCCTCCGGGGCAGGGTGGA-GGGG------ATGGAGC-GAGGCCAGGAGGGCAGAAAGGG----GACTGTGGCACC--------------------AGCCC-------------------TGCCCCAGGACAGCAGCC-GGGGAC-------------------------------------------TTGGTGGGGACGGTG-----TGC------AG--GGAGACAGAAGGGAGGGT-GGTTTGTGTGTGGCGCTGCAGACAGCG------CTGGGCAGCAGGATGGATGTGG----------GGTGCAGG------------AGGAC------------------------------------GG------------------------CTGGGG--------GCAGAGAGAGAG----GCTTTTGTATTTGCCTCAGAGGAGTGCAGAGTG--TCCCCA-CCCCA-CCCCCAGCAGCCCA i manLeu1.NW_012103943v1 I 17 C 0 s colAng1.NW_012115755v1 1757384 534 - 2415367 -----------------ggagttcagagagaa---------------tc---------------------------------------------------------------------------attcat-----------------------------------tcgt--catcagctcggatgtca------tttagag-------------------------ctgagc---acct--------------gcccaa-ggcg------------------------------------------------gaggagatg---------tgtaggta---------------gagaagcagccctactcca-a-catctgcagagg--cctggag-g-------------------------------------------------------------ctgg-------------------aaggccctggtg----------aacacggatggtca-------------------ggc-----cc-----aggcggtgtgggaaaggagactggcatggcctgga-------------------------g-g-caga--gagccacgagcagttctgagagggggagtgacatagtcagatg--tgtGTTTCAGAAGGGTGCCTCCGGGGCAGGGTGGA-GGGG------ATGGAGC-GAGGCCAGGAGGGCAGAAAGGG----GACTGTGGCACC--------------------AGCCC-------------------TGCCCCAGGACAGCAGCC-GGGGAC-------------------------------------------TTGGTGGGGACGGTG-----TTC------AG--GGAGACAGAAGGGAGAGT-GGTTTGTGTGTGGCGCTGCAGACAGGG------CTGGGCAGCAGGATGGATGTGG----------GGTGCAGG------------AGGAC------------------------------------GG------------------------CTGGGG--------GCAGAGAGAGAG----GCTTTTGTATTTGCCTCAGAGGAGTGCAGAGTG--TCCCCA-CCCCA-CCCCCAGCAGCCCA i colAng1.NW_012115755v1 I 17 C 0 s calJac3.chr2 64101119 505 + 204313951 -----------------ggagtgccgagcgag--------------ctc---------------------------------------------------------------------------attcat-----------------------------------ttgt--catcagctgggatgtca------tttagag-------------------------ctgagc---acct--------------gcccgacagca------------------------------------------------gaggaggtg---------tgtaggtg---------------gagaagCAGCCCTACTCTG-A-CATCTTCAGAGG--CCTGGAG-G-------------------------------------------------------------CTGG-------------------AAGGCCCTGGTG----------AACGCTGACGGGCA-------------------GGC-----CC-----AGGTGGTGTGGGAAATGAGACTGTCATGGCCTCGA-------------------------G-G-AAGA--GAGACATGCGGAGTTCCCAGCAAGGGAATGACAGAGTCAGAGATGTGTGTT--AGAAAGCTGCCTTTGCAACAGGGTGG--------------------------AGGGGGGTGGAGAGAG----GCCT------------------------------CCC-------------------TGCCCCAGAACAGCAGC--AGGGAC-------------------------------------------TTGGTGGTG-----G-----GGC------AG--GGAAGCAGAAGGGAGAGT-GGTTTGTGCGTGGTGCTGCAGACAGGG------CTGGGCAGCAGGATGGATGAGG-----------GTGCAGG------------AGGAC------------------------------------GA------------------------CTGGGG--------GCAAGGAGGGAGAGAGGTCTTTGTATTTGCCTCAGAGGAGCGCAGAGTG--TCCCCA-CCCCA-CCCCCAGCAGCCCA i calJac3.chr2 I 17 C 0 s saiBol1.JH378186 2226592 531 + 10068113 -----------------ggagtgcagagagag--------------ctt---------------------------------------------------------------------------attcac-----------------------------------tcat--catcagctgggatgtca------tttagag-------------------------ctgagc---acct--------------gcctgagagtg------------------------------------------------gaggaggtg---------tgtaggtg---------------gagaagcagccctactcca-a-catgtgcagagg--cctggag-g-------------------------------------------------------------ctgg-------------------aaggccctggtg----------aacgctgatggtca-------------------ggc-----cc-----aggtggtatgggaaatgagactggcatggcctcga-------------------------g-g-caga--gagacaggcggagttccaagcaggggaatgaCAGAATCAGATATGTGTGTT--AGAAAGCTGCCTCTGTGGCAGAGTGGA-GGGG------GTGGAGC-GAGGCCAGGGGGGTAGAGAGGG----GACTGTGGCATA--------------------AGCCC-------------------TGCCCCAGGACAGCAGC--GGGGAC-----------------------GGAT----------------TTGGTGGCA-----G-----GGC------AG--GGAAGCAGAAGGGAGAGT-GGTTTGTGCGTGGTGCTGCAGACAGGT------CCAGGCAGCAGGATGGA-----------------TGCGGG------------AGGAG------------------------------------GG------------------------CTGGGG--------GCAGGGAAGGAGAGAGGTCTTTGTATTTGCCTCAGAGGAGTGCAGAGTG--TCCCCA-CCCCA-CCCCCAGCAGCCCA i saiBol1.JH378186 I 17 C 0 s cebCap1.NW_016107999v1 81554 532 - 709587 -----------------ggagtgcagagagag--------------ctc---------------------------------------------------------------------------attcat-----------------------------------ttgt--catcagctaggatgtca------tttagat-------------------------ctgagt---acct--------------gcccaagagcg------------------------------------------------gaggaggtg---------tgtaggtg---------------gagaagcagccctactcca-a-catctgcagagg--cctggag-g-------------------------------------------------------------ctgg-------------------aaggccctagtg----------aacgctgatggtca-------------------ggc-----cc-----aggtggtatgggaaatgagactggcatggcctcga-------------------------g-g-aaga--gtgacatgcggagttcccagcaggggaatgaCAGAGTCAGATATGTGTGTT--AGAAAGCTGCCTCTGCGGCAGGGTGGA-GGGA------GTGGAGC-AAGGCCAGGAGGGTAGAGAGGG----GACTGTGGCATA--------------------AGCCC-------------------TGCCCCAGGACAGCAGC--AGGGAC-------------------------------------------TTGGTGGCG-----G-----GGC------AG--GGAAGCAGAAGGGAGAGT-GGTTTGTGCGTGGTGCTGCAGACAGGG------CTGGGCAGCAGGATGGATTCGG------------TGGggg------------aggag------------------------------------gg------------------------ctgggg--------gcagggagggagagaggTCTTTGTATTTGCCTCAGAGGAGTGCAGAGTG--TCCCCA-CCCCA-CCCGCAGCAGCCCA i cebCap1.NW_016107999v1 I 17 C 0 s aotNan1.NW_018501968v1 1181770 492 - 2246441 -----------------ggagtgcagagagag--------------ctc---------------------------------------------------------------------------ATTCAT-----------------------------------TCGT--CATCAGCTGGGATGTCA------CTTAGAG-------------------------CGGAGC---ACCT--------------GCCCGAGAGCG------------------------------------------------GAGGAGGTG---------TGTAGGTG---------------GAGAAGCAGCCCTACTCCA-A-CATCTGCAGAGG--CCTGGAG-G-------------------------------------------------------------CTGG-------------------AAGGCCCTGGTG----------AACGCTGATGGTCA-------------------GGC-----CC-----AGGCGGTGTGGGAAATGAGACTGGCATGGCCTTGA-------------------------G-G-CAGA--GAGACATGCAGAGTTCCCAGCAGGGGAATGACAGAGTCAGATATGTGTGTT--AGAAAGCTGCCTCTGCGGCagggtggaggggg------gtggagc-gaggccaggagggtggagaggg----gactgtggCACA--------------------AGCCC-------------------TGCCCCAGGACAGCAGC------------------------------------------------------------------------------------GGAAGCAGAAGGGAGACT-GGTTTGTGCGTGGTGCTGCAGACAGGG------CTGGGCGGCAGGATGGATGCGG-----------GTGCGGG------------AGGAC------------------------------------GG------------------------CTGGGG--------GCAGGGAGGGAG---------------------AGAGGAGTGCAGAGTG--TCCCCA-CCCCA-CCCCCAGCAGCCCA i aotNan1.NW_018501968v1 I 453 C 0 s otoGar3.GL873522 1251244 751 + 48283576 -----------------ggagttcagagagag-------gATGCCTCTC---------------------------------------------------------------------------ATTAAT-----------------------------------TTGT--CCTCAGCACAGATGTCAAAATGGCTGAGAGTGCCAAGGAGGCATCTCTGAGATCTCCAAGC---ACCTTCAGGGGCCTAGAGGCCTGGAGGCACCCCAGTTCCTTTAATCCCTGGATGTAGGCTGCCCTGGGATGGCGTGTGAGGagctgacaactttctgcaggcagcactcgcagcagttgggaagtaagtctttt----a-ttcctgcagaggaacctgggt-ggcaccttacactgtcatcacaATCTGTCCCTTGCGCCCCTTGGATCTATTTCATGTAAGTTCTGGGAGAGTCTGTGATGTGCTCAGGGCCATGAGG----------GGCAGTGATGGTCT-------------------GGC-----CT-----AGGCAGTGTGGATAATTAGATTGGC----CTCAAC-------------------------A-a-cagg--gagtcacgtggggtcctaagcaggggggcaacaaagtcagatctatgtttt--agaaaggtccct-TGAGGCACACGGGA------------------------CAGG------GAGAGGG----GACTATAGCACCTCCCCTGACAAGAAGTGGTGAGGCC-------------------TGGCTCAGGACAGCAGCT-GGGGAC-------------------------------------------ACAG----------A-----GAC------TG--GGAGACAT-GGAGAGGGT-GG-TAGGGTGTGGCACT---GACAG-G------CTGAGTGGCAGGATGGATGTGG----------GG-ATGGG------------AAGACAGGTGTTCAGAGCCTTGGGTGGCCCTCACAGTGCTGGA------------------------GTGGGG--------GCAGGGAGAAAG----GCCTCAGTATCCATCTCAGAGACGTGCAGAACA--TCCCTG-CCCCA-CTCCCAGCACCTCA i otoGar3.GL873522 I 17 C 0 s mm10.chr13 66008389 730 - 120421639 -----------------tgagctccaggagcc--------------ctcaaagccccctacccaatgacacgcttcctccaacaaggccacacctcctaatagcacttcccatgggccaagcatattcataccactgcaGCTGGGGTCATGGCCCTGGCTAGAGGTGGT--CCTTAGGACAAATGTCA------TCGAGAG-------------------------CCGAGC---ACCT--------------GGCTAAGGATACT----------------------------------------------GTGGAAGTT---------CACAGACA---------------GATGTGTGGCTC----ACA-G-AGACTTCAAGAG--TCTGGTGTG-------------------------------------------------------------CTGT-------------------GCCTCCATGGGA----------CACCGAGGAGGGCT-------------------GAT-----TCTTCTAATGTGCTATGCAAAGTGAGACTGGTCTGGCTTTAA-------------------------GAA-TAGG--AAGCTGTG-GGGCTTCTGAAGGGGGAACTGACACAGT-AGATCTCTGTTATCAAGG--------TCTTGTGTGGGAGAGA-GGGT------TTGAAG----AGCTTCGAGGGAATTGATGGTGACAGCCCTGGCACC------------ACACAAGGAGGTT-------------------TGGCTCAGGACAGTGGCT-GGGGTTCAGGCATAGGAAGACATAATGGAGGATAAGTTTGTGTGTGGTACTGATGGGGCTGGGG-----TTCAGGCATAG--GAAGACATAATGGAGGATAAGCTTGTGTGTG----TACTGATGGGG------CTGGGTACCA-GATGAATGCAG----------GAAGCAGG------------AAGAT------------------------------------GGATACCAGTGCCTTTGAAAGCTCTCATGGGGTTGCAGATGCAAGAGGAGGG----GTCCTTGTGTTTGTCTCAGAGGAGTACAGACTG--TCCTCA-GCCCATCCCCCAGCACTCTA i mm10.chr13 I 35 C 0 s canFam3.chr4 37181908 548 + 88276631 -----------------gggcttcagggagaa--------------gac---------------------------------------------------------------------------ccttgt-----------------------------------atgt--cactagtatagatgtca------ttgaaag-------------------------ctgtgcctggctt--------------ggctgagagcact----------------------------------------------gaggtagaa---------ggtagatg-----------------gaAGTGGCCCTAATCCAGG-CATCTGCAAAGG--CCTGAGG-C-------------------------------------------------------------TTGA-------------------GAGTTCGTGGTG----------TGCTCAGGATGCCAGGAGACGTTGAGTACTGCTGGC-----CA-----AGTTGGTGTGGAAAATGAGGTTGGCCCAGCCTTGT-------------------------G-GACTGG--AGGCCATGGAGGGTTCTAAGA---GGATT--CTGTGCCAGAACTGTGAGTT--AAA--------TCCAGGGCAGGGGGGA-GAGGGGCACTGTGGAGCTGGAGCTGGGAGCGCAGTGAGGA----CACTGGGGTGCC--------------------AGTCT-------------------TGGCAAGAGGCAG------AGAGGC-------------------------------------------CTGACCCCA--GGAT-----TGC------AGCTGGGGGCTGGAGCCAGGGT-GGGCT-TGTGTGGGACT---GATGGAG------TTGAGTGACAGGCTGGATGTGGGTACTCAGAAGGTGCATGTCCAGAGCTTTCAGGCT------------------------------------TT------------------------CATGGG--------GCTGTGGGGTAG----GG---------------AAAGGATTGCAGAG------CCTG-CTCCC-CCACCAGCACCCCA i canFam3.chr4 I 9 C 0 s dasNov3.JH562710 270743 607 - 960158 ggtggatacatgggcctggaattcaggggagaaggctggagtggactcc---------------------------------------------------------------------------agttgg-----------------------------------gagtgacaccagtgtagctgtca------ctgaaag-------------------------ccacca---gact--------------ggccgagagcccc----------------------------------------------acggaggtg---------tgcagttc---------------aagaagCCATCCTACTCCA-AGCATCTGCAAAGG--CCTGGAG-G-------------------------------------------------------------CCCT------------------CAAGGTCCCGGTGTTATGGGGACACCATGCAGGGTTG-------------------GGCGTTCATC-----AAGCAGCGTGGACATGGGGATTGGAGTGTCCTTGACCAAGGAGCCTGGTCTGGGTCTGTCA-G-CAGG--AAGCCATGGAGGGGTGGCAGCAGGGGAGGGATGTGGTCAGATCTCCGTGTT--ATAAAGGCCTCTCTGGGAGAGAGTGGG-GCTG------GGAGAGC----------------ATGAGGA----GACTGTGGCACC--------------------CACCCAGGCGAGAAGTGGGGAGGGTGACCCAGGGTGGCAGCTGGGGGAC---------------------------------------------------------G-----GGA------CC--GGAGACAGCAGGAGGGAG-GGTTTCTGTGGGGGG--GCAGAAAGTGGGTGTCCAGAGCCTCTGGGTGGCTCTCA--------------CCCG------------AAGCC------------------------------------TG------------------------TGGGGG--------GCAGGGAGGGCG----GCGGCTGTGTTTGTCTCAGAGGAGCACAGAACAACTCCCCACCCCCA-CCCACAGCACCCCA i dasNov3.JH562710 C 0 C 0 e proCoq1.NW_012152163v1 777847 2792 - 940639 I a score=2986867.000000 s hg38.chr5_KI270795v1_alt 69888 165 + 131892 CGG-CCGCTGTGCTTGTTAGCAAGGAACACTCCTCAGAGGGAACATATGTGCTGTTATTTTTAGGTGATTAGCCGCACGTCGTGGAGCGTTTGTTTGCCAGTCGTGGGTAAACAAAAGCCATTTGTCAAAATGAGATGTTCCAGCCTCGTCCTCCCTTCGGCAGGC s panTro5.chr5 5320124 165 - 181907262 CGG-CCGCTGTGCTTGTTAGCAAGGAACACTCCTCAGAGGGAACATATGTGCTGTTATTTTTAGGTGATTAGCCGCACGTCGTGGAGCGTTTGTTTGCCAGTCGTGGGTAAACAAAAGCCATTTGTCAAAATGAGATGTTCCAGCCCTGTCCTCCCTTCGGCAGGC i panTro5.chr5 C 0 C 0 s panPan2.chr5 5582553 165 - 183735486 CGG-CCGCTGTGCTTGTTAGCAAGGAACACTCCTCAGAGGGAACATATGTGCTGTTATTTTTAGGTGATTAGCCGCACGTCGTGGAGCGTTTGTTTGCCAGTCGTGGGTAAACAAAAGCCATTTGTCAAAATGAGATGTTCCAGCCCTGTCCTCCCTTCCGCAGGC i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1712413 165 + 3967317 CAG-CCGCTGTGCTTGTTAGCAAGGAACACTCCTCAGAGGGAACATATGTGCTGTTATTTTTAGGTGATTAGCCGCACGTCGTGGAGCGTTTGTTTGCCAGTCGTGGGTAAACAAAAGCCATTTGTCAAAATGAGATGTTCCAGCCTCGTCCTCCCTTCGGCAGGC i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4589231 165 + 163208435 CGG-CCGCTGTGCTTGTTAGCAAGGAACACTCCTCAGAGGGAACATATGTGCTGTTATTTTTAGGTGATTAGCCGCACGTCGTGGAGCGTTTGTTTGCCAGTCGTGGGTAAACAAAAGCCATTTGTCAAAATGAGATGTTCCAGCCTCGTCCTCCCTTCGGCAGGC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5770664 166 - 180051392 CGGCCCGCTGTGCTTGTTAGCAAGGAACACTCCTCAGAGGGAACATATGTGCTGTTATTTTTAGGTGATTAGCCGCACGTCGTGGAGCGTTTGTTTGCCAGTCGTGGGTAAACAAAAGCCATTTGTCAAAATGAGATGTTCCAGCCTCGTCCTCCCTTCGGCAGGC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5956588 166 - 181584905 CGGCCCGCTGTGCTTGTTAGCAAGGAACACTCCTCAGAGGGAACATATGTGCTGTTATTTTTAGGTGATTAGCCGCACGTCGTGGAGCGTTTGTTTGCCAGTCGTGGGTAAACAAAAGCCATTTGTCAAAATGAGATGTTCCAGCCTCGTCCTCCCTTCGGCAGGC i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 987217 166 - 16193990 CGGCCCGCTGTGCTTGTTAGCAAGGAACACTCCTCAGAGGGAACATATGTGCTGTTATTTTTAGGTGATTAGCCGCACGTCGTGGAGCGTTTGTTTGCCAGTCGTGGGTAAACAAAAGCCATTTGTCAAAATGAGATGTTCCAGCCTCGTCCTCCCTTCGGCAGGC i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1807851 166 - 21434487 CAGCCCAGTGTGCTTGTTAGCAAGGAACACTCCTCAGAGGGAACATATGTGCTGTTATTTTTAGGTGATTAGCCGCACGTCGTGGAGCGTTTGTTTGCCAGTCGTGGGTAAACAAAAGCCATTTGTCAAAATGAGATGTTCCAGCCTCGTCCTCCCTTCGGCAGGC i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4770243 166 - 82825804 CGGCCCGCTGTGCTTGTTAGCAAGGAACACTCCTCAGAGGGAACATATGTGCTGTTATTTTTAGGTGATTAGCCGCACGTCGTGGAGCGTTTGTTTGCCAGTCGTGGGTAAACAAAAGCCATTTGTCAAAATGAGATGTTCCAGCCTCGTCCTCCCTTCGGCAGGC i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 276230 166 + 2521317 CGGCCCGCTGTGCTTGTTAGCAAGGAACACTCCTCAGAGGGAACATATGTGCTGTTATTTTTAGGTGATTAGCCGCACGTCGTGGAGCGTTTGTTTGCCAGTCGTGGGTAAACAAAAGCCATTTGTCAAAATGAGATGTTCCAGCCTCGTCCTCCCTTCGGCAGGC i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1757918 166 - 2415367 CGGCCCGCTGTGCTTGTTAGCAAGGAACACTCCTCAGAGGGAACATATGTGCTGTTATTTTTAGGTGATTAGCCGCACGTCGTGGAGCGTTTGTTTGCCAGTCGTGGGTAAACAAAAGCCATTTGTCAAAATGAGATGTTCCAGCCTCGTCCTCCCTTCGGCAGGC i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64101624 165 + 204313951 CTG-CCGCTATGCCTGTTAGCAAGGAACACTCCTCAGAGGGAACATATGTGCTGTTATTTTTAGGTGATTAGCTGCACGTTGTGGAGCGTTTGTTTGCCAGTCGTGGGTAAACAAAAGCCATTTGTCAAAATGAGATGTTCCAGCCTTGTCCTCCCTTTGGAAGGC i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2227123 165 + 10068113 CGG-CCGCTGTGCTTGTTAGCAAGGAACACTCCTCAGAGGGAACATATGTGCTGTTATTTTTAGGTGATTAGCTGCACGTCGTGGAGCGTTTGTTTGCCAGTCGTGGGTAAACAAAAGCCATTTGTCAAAATGAGATGTTCCAGCCTTGTCCTCCCTTCGGCAGGC i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 82086 165 - 709587 CGG-CCGCTGTGCTTGTTAGCAAGGAACACTCCTCAGAGGGAACATATGTGCTGTTATTTTTAGGTGATTAGCTGCTCGTCGTGGAGCGTTTGTTTGCCAGTCGTGGGTAAACAAAAGCCATTTGTCAAAATGAGATGTTCCAGCCTTGTCCTCCCTTCAGCAGGC i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1182262 165 - 2246441 CGG-CCGCTGTGCTTGTTAGCAAGGAACACTCCTCAGAGGGAACATATGTGCTGTTATTTTTAGGTGATTAGCTGCACGTTGTGGAGCGTTTGTTTGCCAGTCGTGGGTAAACAAAAGCCATTTGTCAAAATGAGATGTTCCAGCCTTGTCCTCCCTTCGGCAGGC i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 780639 164 - 940639 CGG-CCGCCGTGCTTGTTAGCAAGGGACGCTCCTCCGAGGGAACATATGTGCTGTTATTTTTAGGTGATTAGC-GCTTGTCGTGGAGCGTTTGTTTGCCAGGCGTGGGTAAACAAAAGCCGTTTGTCAAAACGAGACGTTCCAGCCCCGTCCTCCCTCGGGCAGGC i proCoq1.NW_012152163v1 I 2792 I 746 s otoGar3.GL873522 1251995 165 + 48283576 CGG-CCGCTGTGCTTGTTAGCAAGAAACACTTCTCAGAGGGAACATATGTGCTGTTATTTTTAGGTGATTAGCTGCACGTTGTGGAGCATTTGTTTGCCAGTCGTGGGTAAACAAAAGCCATTTGTCAAAATGAGATGTTCCAGCCTAGTCCTCGCTTCTGCAGGC i otoGar3.GL873522 C 0 C 0 s mm10.chr13 66009119 159 - 120421639 TGG-CCACCGTGCTTGTTAACAAGGAACACGCCTCAGAGGAAACATATGTGCTGTTATTTTTAGGTGATTAGCCACATGTCGTGGA----CTGTTTGACAGTCGTGGGTAAACAAAAGCCATTTGTCAAAATGAGACATTCCAGCCTTG--AGTCCTTCAGCAGGC i mm10.chr13 C 0 C 0 s canFam3.chr4 37182456 164 + 88276631 CGG-CCACTGTGCTTGTTAGCAAGGAACACTCCTTAGAGGGAACATATGTGCTGTTATTTTTAGGTGATTAGCCGCATGTCATGGAGTGTTTGTTTGCCAGTCGTGGGTAAACAAAAGCCATTTGTCAAAATGAGATGTTCTAGCCTCATCCTCCCCTCA-CAGGC i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 271350 164 - 960158 AGG-CCGCTGTGCTTGTTAGCCAGGAACACTCCTCAGAGGGAACATATGTGGTGTTATTTTTAGGTGATTAGCCGCACGTCGTGGAGCGTTTGTTTGCCAGTCGTTGGTAAACAAAAGCCATTTGTCAAAATGAGATGTTGCAGCCTCGTCCTCCCCTCG-CAGGC i dasNov3.JH562710 C 0 C 0 a score=2457196.000000 s hg38.chr5_KI270795v1_alt 70053 184 + 131892 CAGTCCCCGCACTGTGAATTCCTGTTGCATCAGCAGTGAAGCTAATTAG-CTCCTCGGCTCTTGaataataatggccacatttaccgagagatttctgtgcacgaggagccctgcaaatgtg----------at----------ctacgcaa---gaatcacaggtgcatc-ttattggctccag-tttggagtgggggaaactgaggct s panTro5.chr5 5320289 184 - 181907262 CAGTCCCCGCGCTGTGAATTCCTGTTGCATCAGCAGCGAGGCTAATTAG-CTCCTCGGCTCTTGaataataatggccacatttaccgagagatttctgtgcacgaggagccctgcaaatgtg----------at----------ctacgcaa---gaatcacaggtgcatc-ttattggctccag-tttggagtgggggaaactgaggct i panTro5.chr5 C 0 C 0 s panPan2.chr5 5582718 184 - 183735486 CAGTCCCCGCGCTGTGAATTCCTGTTGCATCAGCATCGAGGCTAATTAG-CTCCTCGGCTCTTGAATAATAATGGCCACATTTACCGAGAGATTTCTGTGCAGGAGGAGCCCTGCAAAtgtg----------ag----------ctacgcaa---gaatcacaggtgcatc-ttattggctccag-tttggagtgggggaaactgaggct i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1712578 184 + 3967317 CAGTCCCCGCGCTGTGAATTCCTGTTGCATCAGCAGCGAGGCTAATTAG-CTCCTCGGCTCTTGAATAATAATGGCCACATTTACCAAGAGATTTCTGTGCACGAGGAGCCCTGCAAATGTG----------AT----------CTACGCAA---GAATCACaggtgcatc-ttattggctccag-tttggagtgggggaaactgaggct i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4589396 184 + 163208435 CAGTCCCCGCGCTGTGAATTCTTGTTGCATCAGCAGCAAGGCTAATTAG-CTCCTCGGCTCTTGAATAATAATGGCCACATTTACCGAGAGATTTCTGTGCATGAGGAGCCCTGCAAAtgtg----------ag----------ctacgcaa---gaatcacaggtgcatc-ttattggctccag-tttggagtgggggaaactgaggct i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5770830 184 - 180051392 CAGTCCCCGCGCTGTGAATTCCTGTTGCATCAGCAGCGAGGCTAATTAG-CTCCTCGGCTCTTGaataataatggccacatttaccgagagatttctgtgcaccaggagccctgcaaatgcc----------at----------ctatgcaa---gaatcacaggtgcatc-ttattggctgcag-tttggagtggaggaaactgaggct i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5956754 184 - 181584905 CAGTCCCCGCGCTGTGAATTCCTGTTGCATCAGCAGCGAGGCTAATTAG-CTCCTCGGCTCTTGaataataatggccacatttaccgagagatttctgtgcaccaggagccctgcaaatgcc----------at----------ctatgcaa---gaatcacaggtgcatc-ttattggctgcag-tttggagtggaggaaactgaggct i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 987383 184 - 16193990 CAGTCCCCGCGCTGTGAATTCCTGTTGCATCAGCAGCGAGGCTAATTAG-CTCCTCGGCTCTTGaataataatggccacatttaccgagagatttctgtgcaccaggagccctgcaaatgcc----------at----------ctatgcaa---gaatcacaggtgcatc-ttattggctgcag-tttggagtggaggaaactgaggct i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1808017 184 - 21434487 CAGTCCCCGCGCTGTGAATTCCTGTTGCATCAGCAGCGAGGCTAATTAG-CTCCTCGGCTCTTGaataataatggccacatttaccgagagatttctgtgcaccaggagccctgcaaatgcc----------at----------ctatgcaa---gaatcacaggtgcatc-ttattggctgcag-tttggagtggaggaaactgaggct i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4770409 184 - 82825804 CAGTCCCCGCGCTGTGAATTCCTGTTGCATCAGCAGCGAGGCTAATTAG-CTCCTCGGCTCTTGaataataatggccacatttaccgagagatttctgtgcaccaggagtcctgcaaatacc----------at----------ctatgcaa---gaatcacaggtgcatc-ttattggctgcag-tttggagtggaggaaactgaggct i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 276396 184 + 2521317 CAGTCCCCGCGCTGTGAATTCCTGTTGCATCAGCAGCGAGGCTAATTAG-CTCCTCGGCTCTTGaataataatggccacatttaccgagagatttctgtgcaccaggagccctgcaaatgcc----------at----------ctatgcaa---gaatcacaggtgcatc-ttattggctgcag-tttggagtggaggaaactgaggct i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1758084 184 - 2415367 CAGTCCCCGCGCTGTGAATTCCTGTTGCATCAGCAGCAAGGCTAATTAG-CTCCTCGGCTCTTGaataataatggccatatttacagagagatttctgtgcaccaggagccctgcaaatgcc----------at----------ctatgcaa---gaatcacaggtgcatc-ttattggctccag-tttggagtggaggaaactgaggct i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64101789 180 + 204313951 CAGTCCCCGCGCTGTGAATTCCTGTTGCATCAGCAGCGAGGCTAATTAGCCTCCTCGGCTCTTGAATAATAATGGCCACATTTACCGAGAGATTTCTGTGCACCGGGAACCCC---AATGCC----------AG----------CTACGAAA---GAATCACaggtgcatc-ttattggctccag-attggagtcggggaaac--aggct i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2227288 180 + 10068113 CAGTCCCCGCGCTGTGAATTCCTGTTGCATCAGCAGCGAGGCTAATTAGCCTCCTCGGCTCTTGAATAATAATGGCCACATTTACCGAGAGATTTCTGTGCACCGGGAACCCC---AATGCC----------AG----------CTACGAAA---GAATCACaggtgcatc-ttattggctccag-attggagtgggggaaac--aggct i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 82251 180 - 709587 CAGTCCCCGCGCTGTGAATTCCTGTTGCATCAGCAGCGAGGCTAATTAGCCTCCTCAGCTCTTGAATAACAATGGCCACATTTACCGAGAGATTTCTGTGCACCGGGAACCCC---AATGCC----------AG----------CTACGAAA---GAATCACaggtgcatc-ttattggctccag-attggagtgggggaaac--aggct i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1182427 180 - 2246441 CAGTCCCCGCGCTGTGAATTCCTGTTGCATCAGCAGTGAGGCTAATTAGCCTCCTCGGCTCTTGAATAATAATGGCCACATTTACTGAGAGATTTCTGTGCACTGGGAACCCC---AATGTC----------AT----------CTACGAAA---GAATCACaggtgcatc-ttattggctccag-attggagtgggggaaac--aggct i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1252160 191 + 48283576 CAGT---TGCACTGTGAACTCCTGTTGCATCAGCAGCGAGGCTAATTAG-CCATGTGGCTCCTGaataacaatggccacttttactgagacgtttctgcatgccaggagccatgcaaatgcc----------attttctcaaagctgtgtaa---gagtcatgggtgggtc-ttgttggccccat-tttggagttggggaaactgagtga i otoGar3.GL873522 C 0 C 0 s mm10.chr13 66009278 183 - 120421639 CAGTTGCCTCACTGTGAATTTCTGTTGCATCTGCAGTGAGGCTAATTAG-CAACGCGACTCCTGAATAATAACGCCTGTGTCTGCTCAGC--CTCCTGTGAGCAGAGAGCCAG--CAATGCC----------TT----------CTTCAGGAAGCAAGTCACAGGTGCATC-TCTTTGGTGCCAT-TTTAGAGTTGGAGACTCTGACAAT i mm10.chr13 C 0 C 0 s canFam3.chr4 37182620 194 + 88276631 CAGTTGCTG-GCTGTGAATTCCTGTTGCATCAGCAACGTGGCTAATTAG-CTCTGCTGCTCCTGaataataatggccacattcacggagaggtgtctgcatgccaggagccttgcaaatgtgcaaactttgaag----------ctgcacaa---gatgcacaggtacatctttattggtcccat-tttagaattggggaaactgaggct i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 271514 195 - 960158 CAGTTGCTGCGCTGTGAATTCCTGTTGTATCAGCAGCGAGGCTAATTAG-AGCCGCGACTCCTGAATCataatggctgcgtttagggagaggttcctgagtgccaggagcccggcaagcgtgcgcccctagaag----------ccccacga---cacccacaggcgcatc-tctttggtcccagttttggaggctgagaaactgaggct i dasNov3.JH562710 C 0 C 0 e proCoq1.NW_012152163v1 780803 746 - 940639 I a score=1365700.000000 s hg38.chr5_KI270795v1_alt 70237 117 + 131892 ----cagggaggtggagcggtttgctcaaggccccacagctaggaagtgaaagctctgacattctcagatc-tgaatgacccccaagcctgAGATGGGTGAGGGGGCTGCTCTGTTC---TTCTG s panTro5.chr5 5320473 114 - 181907262 ----cagggaggtggagcggtttgctcaaggccccacagctaggaagtgaaagctctgacattctcagatc-tgaatgacccccaagcctgAGATGGGTGAGGGGGCTGCTCTG------TTCTG i panTro5.chr5 C 0 C 0 s panPan2.chr5 5582902 117 - 183735486 ----cagggaggtggagcggtttgctcaaggccccacagctaggaagtgaaagctctgacattctcagatc-tgaatgacccccaagcctgAGATGGGTGAGGGGGCTGCTCTGTTC---TTCTG i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1712762 117 + 3967317 ----cagggaggtggagcggtttgctcaaggccccacagctaggaagtgaaagctctgacattctcagatc-tgaatgacccccaagcctgAGATGGGTGATGGGGCTGCTCTGTTC---TTCTG i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4589580 117 + 163208435 ----cagagaggtggagcagtttactcaaggccccacagctaggaagtgaaagctctgacattctcagatc-tgaatgaccccaaagcctgAGATGGGTGAGGGGGCTGCTCTGTTC---TTCTG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5771014 117 - 180051392 ----cagggaggtggagcagtttgctcaaggccccacagctaggaagttaaagctctgacattctcaggtc-tgaatgaccccaaagcctgAGATGGGTGAGGGGGCTGCTCTGTTC---TTCTG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5956938 117 - 181584905 ----cagggaggtggagcagtttgctcaaggccccacagctaggaagttaaagctctgacattctcaggtc-tgaatgaccccaaagcctgAGATGGGTGAGGGGGCTGCTCTGTTC---TTCTG i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 987567 113 - 16193990 ----cagggaggggg----gtttgctcaaggccccacagctaggaagttaaagctctgacattctcaggtc-tgaatgaccccaaagcctgAGATGGGTGAGGGGGCTGCTCTGTTC---TTCTG i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1808201 117 - 21434487 ----cagggaggtggagcagtttgctcaaggccccacagctaggaagttaaagctctgacattctcaggtc-tgaatgaccccaaagcctgAGATGGGTGAGGGGGCTGCTCTGTTC---TTCTG i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4770593 117 - 82825804 ----cagggaggtggagcagtttgctcaaggccccccagctaggaagttaaagctctgacattctcaggtc-tgaatgaccccaaagcctgAGATGGGTGAGGGGGCTGCTCTGTTC---TTCTG i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 276580 117 + 2521317 ----cagggaggtggagcagtttgctcaaggccccacagctaggaagttaaagctctgacattctcaggtc-tgaatgaccccaaagcctgAGATGGGTGAGGGGGCTGCTCTGTTC---TTCTG i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1758268 117 - 2415367 ----tagggaagtggagcagtttgctcaaggccccacagctaggaagttaaagctctgacattctcaggtc-tgaatgaccccaaagcctgAGATGGGTGAGGGGGCTGCTCTGTTC---TTCTG i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64101969 114 + 204313951 ----tgaggaggtggagtggtttgct-aaggccccacagctaggaagttaaag--ctgacatcctctgatt-tcagtaaccccaaagcctgAGATGGGTGAGGGGACTGCTCTGTTT---TTCTG i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2227468 117 + 10068113 ----tggggaggtggagtggtttgct-aaggccccacagctaggaagttaaagctctgacatcctctgattcccaataaccccaaagcctgAGATGGGTGAGGGGACTGCTCTGTTT---TTCTG i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 82431 116 - 709587 ----tggggaggtggagtggttggct-aaggccccacagctaggaagttaaagctctgacatcctctgatc-tcaataaccccaaagcctgAGATGGGTGAGGGGACTGCTCTGTTT---TTCTG i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1182607 116 - 2246441 ----tggggaggtggagtggtttgct-aaggccccacagccaggaagttaaagctctgacatcctctgatc-tcaataaccccaaagcctgAGATGGGTGAGGGGACTGCTCTGTTT---TTCTG i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1252351 116 + 48283576 ----cagggaggtagagtgacttgctcaaggccctgtagccaggaagctgaagctctgggattctcagatc-tgaatgaccccaaagcctgAGAGGGGTGAAGGG-CTTCCCTGTTC---TTCCT i otoGar3.GL873522 C 0 C 0 s mm10.chr13 66009461 92 - 120421639 ----AACGGAGGGAGGGTAAGTTCCT----------------------TATGGCTCTGTGACCCTTGGATC-TGAAGGATCCCAAAGCCTGAGGCTGGTGAGGG--CTTCTCTGTAC---TTTT- i mm10.chr13 C 0 C 0 s dasNov3.JH562710 271709 105 - 960158 ccgggagggaggtggagtagcttgtgcaaggccctgcagctgggaagttgaggctctg--------------gg---ggccctagagcccgagATGGGTCAGAGGGCTGCTCTGTTCAGGTT--- i dasNov3.JH562710 C 0 C 0 e canFam3.chr4 37182814 0 + 88276631 C e proCoq1.NW_012152163v1 780803 746 - 940639 I a score=1109897.000000 s hg38.chr5_KI270795v1_alt 70354 98 + 131892 GAATAT-CTCCCCTTCCCCATCCTGTGAGCAGAAACTGAGCAACAT---CAC--------AAGCAGCCTAAGGTAATTAGAC---TATCATTCCTTGTATGGAGTTCAAATCT s panTro5.chr5 5320587 98 - 181907262 GAATAT-CTCCCCTTCCCCATCCTGTGAGCAGAAACTGAGCAACAT---CAC--------AAGCAGCCTAAGGTAATTAGAC---TATCATTCCTTGTATGGAGTTCAAATCT i panTro5.chr5 C 0 C 0 s panPan2.chr5 5583019 98 - 183735486 GAATAT-CTCCCCTTCCCCATCCTGTGAGCAGAAACTGAGCAACAT---CAC--------AAGCAGCCTAAGGTAATTAGAC---TATCATTCCTTGTATGGAGTTCAAATCT i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1712879 98 + 3967317 GAATAT-CTCCCCTTCCCCATCCTGTGAGCAGAAACTGAGCAACAT---CAC--------AAGCAGCCTAAGGTAATTAGAC---TATCATTCCTTGTATGGAGTTCAAATCT i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4589697 98 + 163208435 GAATAT-CTCCCCTTCCCCATCCTGTGAGCAGAAACTGAGCGACGT---CAT--------AAGCAGCCTAAGGTAATTAGAC---TGTCATTCCTTGTATGGAGTTCAAATCT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5771131 101 - 180051392 GAATAT-CTCCCCTTCCCCATCCTGTGAGCAGAAACTGAGCAACATCACCAC--------CAGCAGCCTAAGGTAATTAGAC---TGTCACTCCTTGTATGGAGTTCAAATCT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5957055 101 - 181584905 GAATAT-CTCCCCTTCCCCATCCTGTGAGCAGAAACTGAGCAACATCACCAC--------CAGCAGCCTAAGGTAATTAGAC---TGTCACTCCTTGTATGGAGTTCAAATCT i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 987680 101 - 16193990 GAATAT-CTCCCCTTCCCCATCCTGTGAGCAGAAACTGAGCAACATCACCAC--------CAGCAGCCTAAGGTAATTAGAC---TGTCACTCCTTGTATGGAGTTCAAATCT i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1808318 101 - 21434487 GAATAT-CTCCCCTTCCCCATCCTGTGAGCAGAAACTGAGCAACATCACCAC--------CAGCAGCCTAAGGTAATTAGAC---TGTCATTCCTTGTACGGAGTTCAAATCT i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4770710 101 - 82825804 GAATAT-CTCCCCTTCCCCATCCTGTGAGCAGAAACTGAGCAACATCACCAC--------CAGCAGCCTAAGGTAATTAGAC---GGTCATTCCTTGTACGGAGTTCAAATCT i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 276697 101 + 2521317 GAATAT-CTCCCCTTCCCCATCCTGTGAGCAGAAACTGAGCAACATCACCAC--------CAGCAGCCTAAGGTAATTAGAC---TGTCATTCCTTGTACGGAGTTCAAATCT i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1758385 101 - 2415367 GAATAT-CTCCCCTTCCCCACCCTGTGAGCAGAAACTGAGCAACATCACCAC--------CAGCAGCCTAAGGTAATTAGAC---TGTCATTCCTTGTACGGAGTTCAAATGT i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64102083 99 + 204313951 GAATAT-CTCCTCTTCCGCATTCTCTGAGCAGAAACTTAGCAACATCACCAC--------AAGCAGCCTAAGGTAATTAGAC-----TCATTCCTTATATGGAGTTCAAATCT i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2227585 99 + 10068113 GACTAT-CTCCTCTTCCCCGTCCTCTGAGCAGAAACTTAGCAACATCACCAC--------GAGCAGCCTAAGGTAATTAGAC-----TCATTCCTTATATGGAGTTCAAATCT i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 82547 99 - 709587 GAATAT-CTCCTCTTCCCCATCCTCTGAGCAGAAACTTAGCAACATCACCAC--------GAGCAGCCTAAGGTAATTAGAC-----TCATTCCTTATATGGAGTTCAAATCT i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1182723 99 - 2246441 GAATAT-CTCCTTTTCCGCATCCTCTGAGCAGAAACTTAGCAACATCACCAC--------GAGCAGCCTAAGGTAATTAGAC-----TCATTCCTTATATGGGGTTCAAATCT i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1252467 76 + 48283576 AAACCA-TCTCCTTTCTCCATCATATGACCAGAAACTGTGCAATGTCACCACT-------GAGCTGCCTA----GACCTGGC---TGC----------------------TGT i otoGar3.GL873522 C 0 C 0 s mm10.chr13 66009553 89 - 120421639 GACTCT-CTCCCTTCTCCCATCCTG-----AGAAACTCAGTACC----------------TAGCAGCGT--GGTGGGTAGAGGATTGCCATTCTTCACACAGCGCTCAAATCT i mm10.chr13 C 0 N 0 s canFam3.chr4 37182814 97 + 88276631 GAACAT-CTGCTCTCCCCCATCCCGGGAATGGGGACTCAGCAATGCCACCAGTCATTCTGGAGCAGCTTA-GGTAATTAAAC---TAG-------TGCTGGGAATTCCA---- i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 271814 102 - 960158 GAACACACCCTCTTTCCCCACCCCAAGCGCAGGAACTCTGCAAAGTCACCATG-------gggcagctta-ggtcattggac---tgtcactccttatactgagcccagatct i dasNov3.JH562710 C 0 C 0 e proCoq1.NW_012152163v1 780803 746 - 940639 I a score=3284582.000000 s hg38.chr5_KI270795v1_alt 70452 309 + 131892 TCATTGCATCCAAGGTATCTGCTCTGTTTCT-CACTTCTGAGTCCTGCACGTGCTAACCTTTCC---------------AATCTC------------------Tgggctttgga---c---agccacagtgagtctgaggtttgtttctgccacttcaggtctaa---------------------------------------------------gtatgagcttgggcaggtctctgagatgaagtgtgt--tggggctcattggc---cag----tgctcctgaagtcaataccattggaagggagcggggaggagcaggc-tgggcaaagggggaggctgacctatgatgctatctcagcagaagcctcagctggc-------------ctgaggatgggatgacccctca-ggactgtc s panTro5.chr5 5320685 312 - 181907262 TCATTGCATCCAAGGTATCTGCTCTGTTTCT-CACTTCTGAGTCCTGCACGTGCTAACCTTTCC---------------AATCTC------------------Tgggctttgga---c---agccacagtgagtctgaggtttgtttctgccacttcaggtctga---------------------------------------------------gtatgagcttgggcaggtctctgagatgaagtgtgtgggggggctcattggc---cag----tgctcctgaagtcaataccattggaagggagtggggaggagcaggcttgggcaaagggggaggctgacctatgatgctatctcagcagaagcctcagctggc-------------ctgaggatgggatgacccctca-ggactgtc i panTro5.chr5 C 0 C 0 s panPan2.chr5 5583117 310 - 183735486 TCATTGCATCCAAGGTATCTGCTCTGTTTCT-CACTTCTGAGTCCTGCACGTGCTAACCTTTCC---------------AATCTC------------------TGGGCTTTGGA---C---AGCCACAGTGAGTCTGAGGTTTGTTTCTGCCACTTCAGGTCTGA---------------------------------------------------GTATGAGCTTGGGCAGGTctctgagatgaagtgtgt--gggggctcattggc---cag----tgctcctgaagtcaataccattggaagggagtggggaggagcaggcttgggcaaagggggaggctgacctatgatgctatctcagcagaagcctcagctggc-------------ctgaggatgggatgacccctca-ggactgtc i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1712977 309 + 3967317 TCATTGCATCCAAGGTATCTGCTCTGTTTCT-CACTTCTGAGTCCTGCACGTGCTAACCTTTCC---------------AATCTC------------------TGGGCTTTGGA---C---AGCCACAGTGAGTCTGAGGTTTGTTTCTGCCACTTCAGGTCTGA---------------------------------------------------GTATGAGCTTGGgcaggtctctgagatgaagtgtgt--gggggctcattggc---cag----tgctcctgaagtcaataccattggaagggagcggggaggagcaggc-tgggcaaagggggaggctgacctatgatgctatctcagcagaagcctcagctggc-------------ctgaggatgggatgacccctca-ggactgtc i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4589795 310 + 163208435 TCATTGCCTCCAAGGTATCTGCTTTGTTTCT-CACTTCTGAGTCCTGCACGTCCTAACCTTTCC---------------AATCTC------------------TGGGCTTTGGA---C---AGCCACAGTGAGTCTGGGGTTTGTTTCTGCCACTTCAGGTCTGA---------------------------------------------------GTATGAGCTTGGGCAagtctctgagatgaagtgtgt--gtgggctcattggc---cgg----tgctcctgaagtcaataccactggaagggagcagggaggagcaggcgtgggcaaagcgggaggctgacctgtgatgctatctcagcagaagcctcagctggc-------------ctgaggatgggatgacccctca-ggactgtc i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5771232 295 - 180051392 CCGCTGCATCCAAGGTCTCTGCTCCGTTTCT-CACTTCTGAGTCCTGCACGTGCTGACCTTTCC---------------AGTCTC------------------TGGGCTTTGGA---C---AGCCTCAGAGAGTC--AGGTTTGTTTCTGCCACTTCAGGTCTGA---------------------------------------------------GTATGAGCTTGGGCAGGTctctgagatgaagtgtgt--gtgggctcattggc---cag----tgcccctcaagtcaataccagtggaaggg-------------aggcttgggcaaagggggaggctgacctatgatgctatctcagcagaagcctcagatggc-------------ctgaggatgggatgacccctca-ggactgtt i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5957156 295 - 181584905 CCGCTGCATCCAAGGTCTCTGCTCCGTTTCT-CACTTCTGAGTCCTGCACGTGCTGACCTTTCC---------------AGTCTC------------------TGGGCTTTGGA---C---AGCCTCAGAGAGTC--AGGTTTGTTTCTGCCACTTCAGGTCTGA---------------------------------------------------GTATGAGCTTGGGCAGGTCGctgagatgaagtgtgt--gtgggctcattggc---cag----tgcccctcaagtcaataccagtggaaggg-------------aggcttgggcaaagggggaggctgacctatgatgctatctcagcagaaacctcagatagc-------------ctgaggatgggatgacccctca-ggactgtt i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 987781 295 - 16193990 CCGCTGCATCCAAGGTCTCTGCTCCGTTTCT-CACTTCTGAGTCCTGCACGTGCTGACCTTTCC---------------AGTCTC------------------TGGGCTTTGGA---C---AGCCTCAGAGAGTC--AGGTTTGTTTCTGCCACTTCAGGTCTGA---------------------------------------------------GTATGAGCTTGGGCAGGTCGctgagatgaagtgtat--gtgggctcattggc---cag----tgcccctcaagtcaataccagtggaaggg-------------aggcttgggcaaagggggaggctgacctatgatgctatctcagcagaaacctcagatggc-------------ctgaggatgggatgacccctca-ggactgtt i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1808419 295 - 21434487 CCGCTGCATCCAAGGTATCTGCTCTGTTGCT-CACTTCTGAGTCCTGCACGTGCTGACCTTTCC---------------AGTCTC------------------TGGGCTTTGGA---C---AGCCTCAGAGAGTC--AGGTTTGTTCCTGCCACTTCAGGTCTGA---------------------------------------------------GTATGAGCTTGGGCAGGTCGctgagatgaagtgtgt--gtgggctcattggc---cag----tgctcctcaagtcaataccagtggaaggg-------------aggcttgggcaaagggggaggctgacctatgatgctatctcagcagaagcctcagatggc-------------ctgaggatgggatgacccctca-ggactgtt i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4770811 307 - 82825804 CCACTGCATCCAAGGTATGTGCTCTGTTGCT-CACTTCTGAGTCCTGCATGTGCTGACC-TTCC---------------AGTCTC------------------TGGGCTTTGGA---C---AGCCACAGAGAGTC--AGGTTTGTTTCTGCCACTTCAGGTCTGA---------------------------------------------------GTATGAGCTTGGGCAGGTctctgagatgaagtgtgt--gtgggctcattggc---cag----tgctcctcaagtcaataccagtggaagggagcggggaggagcaggcttgggcaaagggggaggctgacctatgatgctatctcagcagaagcctcagctggc-------------ctgaggatgggatgacccctca-cgactgtt i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 276798 295 + 2521317 CCGCTGCATCCAAGGTATCTGCTCTGTTGCT-CACTTCTGAGTCCTGCACGTGCTGACCTTTCC---------------AGTCTC------------------TGGGCTTTGGA---C---AGCCTCAGAGAGTC--AGGTTTGTTTCTGCCACTTCAGGTCTGA---------------------------------------------------GTATGAGCTTGGgcaggttgctgagatgaagtgtgt--gtgggctcattggc---cag----tgctcctcaagtcaataccagtggaaggg-------------aggcttgggcaaagggggaggctgacctatgatgctatctcagcagaagcctcagatggc-------------ctgaggatgggatgacccctca-ggactgtt i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1758486 308 - 2415367 CCACTGCATCCGAGGTATCTGCTCTGTTTCT-CACTTCTGAGTCCTGCACATGCTGACCTTTCC---------------AGTCTT------------------TGGGCTTTGGA---C---AGCCACAGAGAGTC--AAGTTTGTTTCTGCCACTTCAGGTCTGA---------------------------------------------------GTATGAGcttgggcagatctctgagatgaagtgtgt--gtaggctcattggc---cag----tgctcctcaagtcaataccagtggaagagagtggggaggagcaggcttgggcaaagggggaggctgacctatgatgctatctcagcagaagcctcagctggc-------------ctgaggatgggatgacccctca-ggactgtt i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64102182 309 + 204313951 TCATTGCATCCAAGGT-TCTGCTCTGTTTCT-CACTTCTGAGTCCTGCACGTGCTGACTTTCCC---------------AGTCTC------------------TGGGCTTTGGA---C---AGTAACAATGAGTCTGAGGTTTGTTTCTGCCACTCCAGGTCTGA---------------------------------------------------GTATGAGcttgggcaagtctctgacatgaagtgtgt--aggggctctttagt---cag----tgcttctgaagccaataccattggaagggagcagggagaagcaggcttgggcaaagcggaaggccgacctatgatgctatctcagcagaagcctcagctggc-------------ctgaggatgtgatgacccctca-ggactgtc i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2227684 294 + 10068113 TCATTGCATCCAAGGTATCTGCTCTGTTTCT-CACTTCTGAGTCCTGCACGCG-------------------------------C------------------TGGGCTTTGGA---C---AGTAACAATGAGTCTGAGGTTTGTTTCTGCCACTCCAGGACTGA---------------------------------------------------GTATGAGCTTGGGCAGGTctctgagatgaagtgtgt--acgggctgtttagc---cag----ggctcctgaagccaataccattggaagggagcagggagaagcaggcttgggcaaaggggaaggctgacctatgatgctatcccggcagaagcctccgctggc-------------ctgaggatgtgatgacccctca-gaactgtc i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 82646 310 - 709587 TCATTGCATCCAAGGTATCTGCTCTGTTTCT-CACTTCTGAGTCCTGCACGTGCTGACTTTCCC---------------AGTCTC------------------TGGGTTTTGGA---C---AGTAACAATGAATCTGAGGTTTGTTTCTGCCACTCCAGGTCTGA---------------------------------------------------GTATGAGCTTGGGCAGGTctctgagatgaagcgcgc--aggggctctttagc---cag----tgctcctgaagccaataccattggaagggagcagggagaagcaggcttgggcaaaggggaaggccgacctatgatgctatctcagcagaagcctcagctggc-------------ctgaggatgtgatgacccctcg-ggactgtc i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1182822 310 - 2246441 TCATTGCATCCAAGGTATCTGCTCTGTTTCT-CACTTCTGAGTCCTGCACATGCTGACTTTCCC---------------AGTCTC------------------TGGGCTTTGGA---C---AGTAACAATGAGTCTGAGGTTTGTTTCTGCCACTCTGGGTCTGA---------------------------------------------------GTATGAGCTTGGgcaggtctctgagatgaagcgtgt--aggggctctttagc---cag----tgctcctgaagccaataccactggaagggagcagggagaagcaggcgtgggcaaagcagaaggcccacctatgatgctatctcagcagaagcctcagctggc-------------ctgaggatgtgatgatgcctca-ggactgtc i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1252543 274 + 48283576 GCATTGTATTCAAGGGATCTGCTCTGTTTCT-CCCTTCTGAGTCCTACATGTGCTAACTTTTCT---------------AGTCTC------------------Tgggctttggagccc---gataatagtgagtttgacgtttgtctctgccactctagatccat---------------------------------------------------gtgtgagcttgTGTGGGTctctgagatggagtatgc--aggggtt--tcagc---cag----cgctcccgaaattgatgcctttggaagggag--gggacaagtagatgcacacagaaagggaggctgacctatgatgcTCTCTC------------------------------------------------CTCTTG-GGACTATA i otoGar3.GL873522 C 0 C 0 s canFam3.chr4 37182911 347 + 88276631 ---------TCAGGAGGTTCGCTCTGTGTCTCCCCTTCTGGGTGCTGACTTTTGGGACCTCTCAGTAAAGGGACCAGAGAAGCTCTagaggaaggagcatgcatgggcttcgga---tgaggacagcagtgggtttttagcttgtatttgtcactcaagggcaat---------------------------------------------------gtatgatcttgggctggtctctGCAATACAATATCc--agggagt--ttatc---cagggcatgttcttgagatcaatat-----gaagggaggagacagacacaggactggccagaggaggaagcagacctataatgctgtcttgatgaaag-ttcagctggccctgcacagagttctgaggatgggatggctcttca-gggctgtt i canFam3.chr4 C 0 C 0 s dasNov3.JH562710 271916 311 - 960158 -------------ggt---cactctgtttcttcacttctgggtcttgc------tgaccttttg---------------ggtcCC------------------TAGG---TAAA---T---------------------------------------------GANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTCTGATCTTGGGCAGTTctctgagatgaggcatgc--agggggtttatgcttcataa----tgctcttgagattaatatctttgggaaggagggaccagaagcaggactgggcaaaggaagaggccaaccttggatacactctcaatggaaggctcagccaaccccgtggggagttccgcggatg-gatggctcttcagggGCTGTC i dasNov3.JH562710 C 0 N 0 e proCoq1.NW_012152163v1 780803 746 - 940639 I a score=1197860.000000 s hg38.chr5_KI270795v1_alt 70761 132 + 131892 ccgagtcaaagcaaaagttcgggtacttggcaccccacattggtgccagggaccccacattgggtcattggatgtaggcctccctgggaatggagcatgagg-gctgtcaactttctgcaggcagtactccca s panTro5.chr5 5320997 131 - 181907262 ccgagtcaaagcaaaagttcgggtacttggcaccccacattggtgccagtgaccccac-ttgggtcattggatgtaggcctccctgggaatggagcatgagg-gctgtcaactttctgcaggcagtactccca i panTro5.chr5 C 0 C 0 s panPan2.chr5 5583427 112 - 183735486 ccgagtcaaagcaaaagttcgggtacttggcaccccaca--------------------ttgggtcattggatgtaggcctccctgggaatggagcatgagg-gctgtcaactttctgcaggcagtactccca i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1713286 132 + 3967317 ccgagtcaaagcaaaagttcgggtacttggcaccccacattggtgccagggaccccacattgggtcattggatgtaggcctccctgggaatggagcatgagg-gctgtcaactttctgcaggcagtactccca i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4590105 132 + 163208435 ccaagtcaaggcaaaagttcagatacttggcaccccacattggtgccagtgaccccacattgggtcattggatgtaggcctccctgggaatggagcatgagg-gttgtcaactttctgcaggtggtactccca i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5771527 116 - 180051392 ccgggtcaaggcaaaatgttgggtactcggcaccccacactgg----------------tcggttcatttgatgtaggccaccctgggaatggagtgtgagg-gctgtcaactttctgcagacggtactccca i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5957451 116 - 181584905 ccgggtcaaggcaaaatgttgggtacttggcaccccacattgg----------------tcagttcatttgatgtaggccaccctgggaatggagtgtgagg-gctgtcaactttctgcagacggtactccca i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 988076 116 - 16193990 ccgggtcaaggcaaaatgttgggtacttggcaccccacattgg----------------tcagttcatttgatgtaggccaccctgggaatggagtgtgagg-gctgtcaactttctgcagacggtactccca i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1808714 116 - 21434487 ccgggtcaaggcaaaatgttgggtactcggcaccccacattgg----------------tcagttcatttgatgtaggccaccctgggaatggagtgtgagg-gctgtcaactttctgcagacggtactccca i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4771118 116 - 82825804 ccgggtcaaggcaaaatgttgggtacttggcaccccacattgg----------------tcggttcatttgatgtagggcaccctgggaatggagtgtgagg-gctgtcaactttctgcagacggtactgcca i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 277093 116 + 2521317 ccgggtcaaggcaaaatgttgggtactcggcaccccacattgg----------------tcagttcatttgatgtaggccaccctggaaatggagtgtgagg-gctgtcaactttctgcagacggtactccca i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1758794 116 - 2415367 ccgggtcaaggcaaaatgttgggtacttggcaccccacattgg----------------tcggttcatttgatgtaggccaccctgggaatggagtgtgagg-gctgtcaactttctgcagacagtactccca i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64102491 116 + 204313951 ctgagtcaaggcaaaaggtcaggcacttgacaccccacattgg----------------tcaggtcactggacgtaggccactctgggaatagagtatgagg-gctgttaactttctgcaggtggtactccca i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2227978 116 + 10068113 ctgagtcaaggcaaaaggtcgggtacttggcaccccacattgg----------------tcaggtcactggacgtaggccaccctgggaatagagcatgagg-gctgttctctttctgcaggtggtactcccg i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 82956 114 - 709587 --gagtcaaggcaaaaggtcgagtacttggcaccccacattgg----------------tcaggtcactggacgtaggctgccctgggaatagagtatgagg-gctgttaactttctgcaggtggtgctccca i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1183132 116 - 2246441 ctgagtcaaggcaaaaggtcgggtacttggcaccccacattgg----------------tcaggtcactggatgtaagccgccctgggaGTAGAGTATTAGG-GCTGTTAActttctgcaggtggtactccca i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1252817 116 + 48283576 ctgagtcaaggcaaaaggtctgaaactttgcaccccactgaga----------------gtag-tcattggatgtaggctgccctggggatggaacctgaggaattgacaacttcctgcaggcagcacttgga i otoGar3.GL873522 C 0 C 0 s canFam3.chr4 37183258 112 + 88276631 ctgagttgaggcaaaagagctggacctttgcgcctcatgtcga----------------tctg-tcattgtatataggccact----acatggagcatgaggggctggaaacagtctgccagtagcacaccca i canFam3.chr4 C 0 C 0 e proCoq1.NW_012152163v1 780803 746 - 940639 I a score=5191067.000000 s hg38.chr5_KI270795v1_alt 70893 414 + 131892 gcagctggggtaataagtcctttattcctgcagagggacctgggtggcaccttacagagtccttcacaGT-CA---------CCTCTTGGATCCACTTCATGTAAGTTCTGCG---AGAAGCTCTTCTAGGAGGCAACTTGAAGAGGAAAATTACTGGGATGAACTCCAA---------CCCCTACCTCTGAAG-TTTT-GGGGTCTCAGGGCTGCAACTGACA-TCCTCACCTGCCCACTCCACTACCCAT--------------------------TATAGACCACC-------TCACTCT----------CAGACGACATCTCTGTTGGTCTCCTGATTAcctgagggaactgagaccctggtcaccatgctattttcaggccagggttgctacacttgtcaacttaacatcaaaattgggcaagggagtaccaagaagcacccaagggcatcgcctggatgtcaaacatattcctccc s panTro5.chr5 5321128 414 - 181907262 gcagctggggtaataagtcctttattcctgcagagggacctgggtggcaccttacagagtccttcacaGT-CA---------CCTCTTGGATCCACTTCATGTAAGTTCTGCG---AGAAGCTCTTCTAGGAGGCAACTTGAAGAGGAAAATTACTGGGATGAACTCCAA---------CCCCTACCTCTGAAG-TTTT-GGGGTCTCAGGGCTGCAACTGACA-TCCTCACCTGCCCACTCCACTACCCAT--------------------------TATAGACCACC-------TCACTCT----------CAGACGACATCTCTGTTGGTCTCCTGATTAcctgagggaactgagaccctggtcaccatgctattttcaggccagggttgctacacttgtcaacttaccatcaaaattgggcaagggaataccaagaagcacccaagggcatcacctggatgtcaaacatattcctccc i panTro5.chr5 C 0 C 0 s panPan2.chr5 5583539 414 - 183735486 gcagctggggtaataagtcctttattcctgcagagggacctgggtggcaccttacagagtccttcacaGT-CA---------CCTCTTGGATCCACTTCATGTAAGTTCTGCG---AGAAGCTCTTCTAGGAGGCAACTTGAAGAGGAAAAGTACTGGGATGAACTCCAA---------CCCCTACCTCTGAAG-TTTT-GGGGTCTCAGGGCTGCAACTGACA-TCCTCACCTGCCCACTCCACTACCCAT--------------------------TATAGACCACC-------TCACTCT----------CAGACGACATCTCTGTTGGTCTcctgattacctgagggaactgagaccctggtcaccatgctattttcaggccagggttgctacacttgtcaacttaccatcaaaattgggcaagggagtaccaagaagcacccaagggcatcgcctggatgtcaaacatattcctcct i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1713418 414 + 3967317 gcagctggggtaataagtcctttattcctgcagagggacctgggtggcaccttacagagtccttcacaGT-CA---------CCTCTTGGATCCACTTCATGTAAGTTCTGCG---AGAAGCTCTTCTAGGAGGCAACTTGAAGAGGAAAATTACTGGGATGAACTCCAA---------CCCCTACCTCTGAAG-TTTT-GGGGTCTCAGGGCTGCAACTGACA-TCCTCACCTGCTCACTCCACTACCCAT--------------------------TATAGACCACC-------TCACTCT----------CAGACGCCATCTCTGTTGGTCTcctgattacctgagggaactgagaccctggtcaccatgctattttcaggccagggttgctacacttgtcagcttaccatcaaaattgggcaagggagtaccaagaagcacccaagggcatcgcctggatgtcaaacatattcctccc i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4590237 414 + 163208435 gcagctggggtaataagtcctttattcctgcagagggacctgagtggcaccttacagagtccttcacaGT-CA---------CCTCTTGGATCCACTTCATGTAAGTTCTGCA---AGAAGCTCTTCCAGGAGGCAACTTGAAGAGGAAAATTACTGGGATGAACTCTAG---------TCCCTGCCTCTGAAG-TTTT-GGGGTCTCAGGGTTGCAACTGACA-TCCTCACCTGCCCACTCCACTACCCAT--------------------------TATAGACCACC-------TCACTCT----------CAGATGACATCTCTGTTGGTCTcctgattacctgagggaactgagaccctggtcttcatgctattttcaggccagtgttgctacacttgtcaacttaccatcaaaattgggcaagggagtaccaagaagcacccaaggacatcacctggatgtcaaacatattccttcc i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5771643 415 - 180051392 gcagctggggtaataagtcctttattcctgcagagggacccgagtggcaccttacagagtccTTCACAGTCCA---------CCTCTTGGATCCACTTCATGTAAGTTCTCCG---AGAAGctcttctaggaggcaacctgaagaggaaaattactgggatgaactccag---------cccctgtctctgaag-tttt-agggtcttagggctgcaactgaca-tccttagctgcccactccactacccat--------------------------tatagaccacc-------tcaccct----------cagatgacatctctgttggtctcctgattacctgagggaactgagaccctggtcaccatgctattttcaggccagggttgctacacctgtcaacttaccatcaaaattgggcaagggagtaccaagaagcacccaagggcatcacctggatgtcaaacatattccttcc i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5957567 415 - 181584905 gcagctggggtaataagtcctttattcctgcagagggacctgagtggcaccttacagagtccttcacaGTCCA---------CCTCTTGGATCCACTTCATGTAAGTTCTCCG---AGAAGctcttctaggaggcaacctgaagaggaaaattactgggatgaactccag---------cccctgtctctgaag-tttt-agggtcttagggctgcaactgaca-tccttagctgcccactccactacccat--------------------------tatagaccacc-------tcaccct----------cagatgacatctctgttggtctcctgattacctgagggaactgagaccctggtcaccatgctattttcaggccagggttgctatacctgtcaacttaccatcaaaattgggcaagggagtaccaagaagcacccaagggcatcacctggatgtcaaacatattccttcc i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 988192 415 - 16193990 gcagctggggtaataagtcctttattcctgcagagggacctgagtggcaccttacagagtccttcacaGTCCA---------CCTCTTGGATCCACTTCATGTAAGTTCTCCG---AGAAGctcttctaggaggcaacctgaagaggaaaattactgggatgaactccag---------cccctgtcactgaag-tttt-agggtcttagggctgcaactgacg-tccttagctgcccactccactacccat--------------------------tatagaccacc-------tcaccct----------cagatgacatctctgttggtctcctgattacctgagggaactgagaccctggtcaccatgctattttcaggccagggttgctatacctgtcaacttaccatcaaaattgggcaagggagtaccaagaagcacccaagggcatcacctggatgtcaaacatattcctccc i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1808830 415 - 21434487 gcagctggggtaataagccctttattcctgcagagggacctgagtggcaccttacagagtccgtcacaGTCCA---------CCTCTTGGATCCACTTCATGTAAGTTCTCCG---AGAAGctcttctaggaggcaacctgaagaggaaaattactggggtgaactccag---------cccctgtctctgaag-tttt-agggtcttagggctgcaactgaca-tccttagctgcccactccactacccat--------------------------tatagaccacc-------tcaccct----------cagatgacatctctgttggtctcctgattacctgagggaactgagaccctggtcaccatgctgttttcaggccagggttgctatacctgtcaacttaccatcaaaattgggcaagggagtaccaagaagcacccaagggcatcacctggatgtcaaacatattcctccc i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4771234 415 - 82825804 gcagctggggtaataagtcctttattcctgcagagggacctgagtggcaccttacagagtccttcacaGTCCA---------CCTCTTGGATCCACTTCATGTAAGTTCTCTG---AGAAGctcttctaggaggcaacctgcagaggaaaattactgggatgaactccag---------cctctgtctctgaag-tttt-ggggtcttagggctgcaactgaca-tccttagctgcctactccactacccat--------------------------tatagaccacc-------tcaccct----------cagatgacatctctgttggtctcctgattacctgaaggaactgagaccctggtcaccatgctcttttcaggccagggttgctatacctgtcaacttaccatcaaaattgggcaagggagtaccaagaagcacccaagggcatcacctggatgtcaaacatattcctccc i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 277209 415 + 2521317 gcagctggggtaataagtcctttattcctacagagggacctgagtggcaccttacagagtccttcacaGTCCA---------CCTCTTGGATCCACTTCATGTAAGTTCTCCG---AGAAGctcttctaggaggcaacctgaagaggaaaattactgggatgaactccag---------cccctgtctctgaag-tttt-agggtcttagggctgcaactgaca-tccttagctgcccactccactacccat--------------------------tatagaccacc-------tcaccct----------cagatgacatctctgttggtctcctgattacctgaggaaactgagaccctggtcaccatgctattttcaggccagggttgctatacctgtcaactgaccatcaaaattgggcaagggagtaccaagaagcacccaagggcatcacctggatgtcaaacatattcctccc i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1758910 412 - 2415367 gcagctggggtaataagtcctttattcctgcagagggacctgagtggcaccttacagagtccttcacaGTCCA---------CCTCTTGGATCCACTTCATGTAAGTTCTCCG---AGAAGctcttctaggaggcaacctgaagaggaaaattactgggatgaactccag---------cccctgtctctgaag-tttt-gggggcttagggctgcaactgaca-tcctgagctgcccactccactacccat--------------------------tacagaccacc-------tcaccct----------cagatgacatctctgttggt---ctgattacctgagggaactgagaccctggtcaccatgctattttcaggccagggttgctatacctgtcaacttaccatcaaaattgggcaagggagtaccaagaagcacccaagggcatcacctggatgtcaaacatattcctccc i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64102607 424 + 204313951 gcagctggggtcataagttctttagtcctgcagagggaccttggtggcaccttacagagtccTTCACAGTCCA---------CCTCTTGGATCCACTTCATGTAAGTTCTGTG---AGAAGCTCTTCTAGGAGGAAACTTGAAGAGGAAAATTAGTGAGATGAACTCCAG---------CCTCTGCCTCTGAAT-TTTT-GGAATCTCAGGGCTGCAACTGACA-TCCTTAGCTGCCCACTCCCCTGCCCAT--------------------------TATAGATCACC-------TAACTCTACATCACCGACAGACGACATCTCTGTCGGTCTcctgattacctgagggaac-tagaccctggtcaccatgccatttttaggccaaggttcctatacttggcaacttaccatcaaaactgggcaaggaagtaccaagaagcacccaagggcatcacctggatgtcagacatattcctccc i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2228094 415 + 10068113 gcagctggggtcataagttctttattcccgcagagggaccttggtggcaccttacagagtccttcacaGTCCA---------CCTCTTAGACCCACTTCATGTAAGttctgtg---agaagctcttctaggaggaaacttgaagaggaaaattagtgagatgaactccag---------cctctgcctctgaag-tttt-ggggtctcagggctgcaactgaca-tccttagctgtccactccactgcccat--------------------------tacagatcacc-------taactct----------cagacgacatctctgttggtgtcctggtttcctgagagaatggagaccctggttaccatgccattttcagggcaaggttcctacacttggcaacttaccatcaaaactgggcaagggagtaccaagaagcacccaagggcatcacctggatgtcagacatattcctccc i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 83070 415 - 709587 gcagctggggtcataagttctttattcctgcagagggaccttggtggcgccttacagagtccttcacaGTCCA---------CCTCTTGGACCCACTTCATGTAAGTTCTGTG---AGAAGCTCTTCTAGGAGGAAACTTGAAGAGGAAAATTAGTGAGATGAACTCCAG---------CCTCTGCCTCTGAAG-TTTT-GGGGTCTCAGGGCTGCAACTGACA-TCCTTAGCTGCCCACTCCACTGCCCAT--------------------------TATAGATCACC-------TAACTCT----------CAGACGACATCTCTGTCGGTCTCCTGATTAcctgagggaactgagaccctggtcaccatgccattttcaggccaagtttcctacacttggcaacttaccatcaaaactgggcaagagagtaccaagaagcacccaagggcatcgcgtggatgtcagacatattccaccc i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1183248 411 - 2246441 gcagctggggtcataagttctttattcctgcagagggaccttggtggcaccttacagagtccttcacaGTCCA---------CCTCTTGGATCCACTTCCTGTAAGttctgtg---agaagctcttctaggaggaaacttgaagaggaaaatt----agatgaactccag---------cctctgcctctgaag-tttt-ggggtctcagggctgcaactgaca-tccttagctgcccactccactgcccat--------------------------tatagatcacc-------taactct----------cagacgacatctctgttggtcttccgattacctgagggaactaagaccctggtcaccatgccattttcaggccaaggttcctacacttggcaacttaccatcaaaactgggcaacggagtaccaagaagcacccaagggcatcacctggatgtcagacatattcctccc i aotNan1.NW_018501968v1 C 0 C 0 s proCoq1.NW_012152163v1 781549 408 - 940639 gcagcgggggcagtaagtcctttattcctgcagagggg--tgggtggcaccttacag----------agtcca-ccCTTGAGCCCCTTGGATCCATTTCGTGTAAGTTCTGGG---AGAAGCTCCTGTAGGAGGAAACTTAAAGAGGAAGGTCAGTGGGACGAACTGCAG----------GCCCGTCTCTGAAG-CTTTCGGGGTCTCGGGGCTGCAACTGACACTCCTCGGCCGCCTGCCCCACTACCTGT--------------------------TAGAGGTTTCC-------TTGCTGT----------CAGGGGACCTCTCTGTTGGCCTCCTGCTTAcctgaaggaactgagaccctggtcaccatg--cccttcaggccaggggagctacacttgttaatttgctgtcaaaattgggcaagtgagtacaa--aggcaccccaggggatcacccaagtgtcaaacttattcctccc i proCoq1.NW_012152163v1 I 746 N 0 s otoGar3.GL873522 1252933 414 + 48283576 gcagctggggcattaagtcctttatttctgcagaggaacctgggtggcaccttataga--ccaccacaGTCTGTCCCTTGGGCTCCTTGGATCCATTTCACATAAGTTCTCAG---AGAAGCTCCTGAAGGAggaaactgcaaggggaaggttagtggtatgaaccacag---------cccccacctctgaag-ctttgggggactcagggctacaactgatgctccccagctgcctgctccatgacctgt--------------------------tagagg-tccc-------ctgctcc----------caagtgacctctccgttggtcttttgcttacttgaaggaacccagactcttcccatcatg-tcttttcaggccagggttgcaacacttgtcaatttactatcca--------aagtgggtaccacgaggcaccccaggggattgtccaagtgtcaagcatattcctccc i otoGar3.GL873522 C 0 C 0 s canFam3.chr4 37183370 424 + 88276631 gcagctgggggaattactgctttcttcttgcagggggacctgggtggtacctcacagagcccaccacaGGCTA---------TTCCTTGGGCC--------------TCTCTGGGTAGAGGCTCCTCTTGGAGGGAAGTTGAAAAAGAAGGCTAGTGA-ATGAACTACAGAACCCCTCACCCTTCCTACTGAAGCTTTT-TTGGTATCACAGCTGCAACCAACATTCTTCAGCTTCTTCCTCCATTAGCCATGAGGACAGCAGTGGGGTTTCAGCTTGTATTTTTCACTCAAGGTGTCACTGT----------CAGGTGACAGCTctgt-------------------ggggactgagactctggtcaccatgccctttttaggccagggtggctgcacttgt-aatttaccatcaaaa-tgagcaaaggagcattaagaggcacccaaggggatcacctacgagtca-ccatattttctc- i canFam3.chr4 C 0 C 0 a score=8852651.000000 s hg38.chr5_KI270795v1_alt 71307 782 + 131892 agaccccatatgcaaccgcttctggatg-----------------------ccagga-t-gcgactcctcttcttacc-gctggccccttgatgcaaggacaagaaacccagagtgccaaggaggcgactgt--------------------------------------gcttcgactttgagggactctggctgtgccacct--tgcagaagtattttctctttgggaacaaggacctctaaacttacggaacccagagttga-gggacagaaagcacaaattctttaagtgggccact-----------------gggccacttaagcttctacccctaggttcctagacccgtgtattctgcccagtggggatgcagtgccatatatagtatttgatttgaagtgatactgcatcttggaggatggtactgaaaccttgtgaaggcttgtttctgaactggcattgcagctctgtctt---------------------catcgggccagcagctttggggtcatgtggtgtgcag-------tattaacagtggatccctggtcatgggccagcccactcccgcccctgcagggttattgctataagatgggctgttgagtcagaagtgatgttatgtggcatcctgtgccagtgaatcaaacacttcatagacccttgagcagagaatccatgggcaggaaaggcaaatctctatctggaactggtctctattcctgatcttt-caggagaggg---tccaa--tgtagtcatctgccacATGCCAAGCCaaaccaatctca-gttttatcctcttc---agctggtgac-atgggagtcccccatgtggccattcgaatgagctgaggctgctggtgcctcagt----------------------------------------------gg-ggatgatgtggg s panTro5.chr5 5321542 782 - 181907262 agaccccatatgcaaccgcttctggatg-----------------------ccagga-t-gcaactcctcttcttacc-gctggccccttgatgcaaggacaagaaacccagagtgccaaggaggcgactgt--------------------------------------gcttcgactttgaggggctctggctgtgccacct--tgcagaagtattttctctttgggaacaaggacctctaaacttacggaacccagagttga-gggacagaaagcacaaattctttaagtgggccact-----------------gggccacttaagcttctacccctaggttcctagacccgtgtattctgcccagtggggatgcagtgccatatatagtatttgatttgaagtgatactgcatcttggaggatggtactgaaaccttgtgaaggcttgtttctgaactggcattgcagctctgtctt---------------------catcgggccagcagctttggggtcatgtggtgtgcag-------tattaacagtggatccctggtcatgggccagcccactcccacccctgcagggttattgctataagatgggctgttgagtcagaagtgatgttatgtggcatcctgtgccagtgaatcaaacacttcatagacccttgagcagagaatccatgggcaggaaaggcaaatctctatctggaactggtctctattcctgatcttt-caggaggggg---tccaa--tgtagtcatctgccacATGCCAAGCCaaaccaatctca-gttttatcctcttc---agctggtgac-atgggtgtcccccatgtggccattcgaatgagctgaggctgctggtgcctcagt----------------------------------------------gg-ggatgatatggg i panTro5.chr5 C 0 C 0 s panPan2.chr5 5583953 782 - 183735486 agaccccatatgcaaccgcttctggatg-----------------------ccagga-t-gcgactcctcttcttacc-gctggccccttgatgcaaggacaagaaacccagagtgccaaggaggcaactgt--------------------------------------gcttcgactttgaggggctctggctgtgccacct--tgcagaagtattttctctttgggaacaaggacctctaaacttacggaacccagagttga-gggacagaaagcacaaattctttaagtgggccact-----------------gggccacttaagcttctacccctaggttcctagacccgtgtattctgcccagtggggatgcagtgccatatatagtatttgatttgaagtgatactgcatcttggaggatggtactgaaaccttgtgaaggcttgtttctgaactggcattgcagctctgtctt---------------------catcaggccagcagctttggggtcatgtggtgtgcag-------tattaacagtggatccctggtcatgggccagcccactcccgcccctgcagggttattgctataagatgggctgttgagtccgaagtgatgttatgtggcatcctgtgccagtgaatcaaacacttcatagacccttgagcagagaatccatgggcaggaaaggcaaatctctatctggaactggtctctattcctgatcttt-caggaggggg---tccaa--tgtagtcatctgccacATGCCAAGCCaaaccaatctca-gttttatcctcttc---agctggtgac-atgggagtcccccatgtggccattcgaatgagctgaggctgctggtgcctcagt----------------------------------------------gg-ggatgatgtggg i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1713832 782 + 3967317 agaccccatatgcaaccgcttctggatg-----------------------ccagga-t-gcgactcctcttcttacc-gctggccccttgatgcaaggacaagaaacccagagtgccaaggaggcgactgt--------------------------------------gcttcgactttgagggactctggctgtgccacct--tgcagaagtattttctctttgggaacaaggacctctaaacttacggaacccggagttga-gggacagaaagcacaaattctttaagtgggccact-----------------gggccacttaagcttctacccctaggttcctagacctgtgtattctgcccagtggggatgcagtgccatatatagtatttgatttgaagtgatactgcatcttggaggatggtactgaaaccttgtgaaggcttgtttctgaactggcattgcagctctgtctt---------------------catcgggccagcagctttggggtcatgtggtgtgcag-------tattaacagtggatccctggtcatgggccagcccactcccgcccctgcagggttattgctatacgatgggctgttgagtcagaagtggtgttatgtggcatcctgtgccagtgaatcaaacacttcataggcccttgagcagagaatccatgggcaggaaaggcaaatctctatctggaactggtctctattcctgatcttt-caggaggggg---tccaa--tgtagtcatctgccacATGCCAAGCCaaaccaatctca-gttttatcctcttc---agctggtgac-atgggagtcccccatgtggccattcgaatgagctgaggctgctggtgcctcagt----------------------------------------------gg-ggatgatgtggg i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4590651 803 + 163208435 agaccccatatgcaaccccttctggatg-----------------------ccagga-t-gtgattcctcttcttacc-gctggccccttgatgcaaggacaagaaacccagagtgccaaggaggcagctgt--------------------------------------gcttcgactttgagggactctggctgtgccacct--tgcagaagtattttctctttgggaacaaggacctctaaacttacggaacccagagttga-gggacagaaagcacaaattctctaagtgggccact-----------------gggccacttaagcttctacccctaggttcctagacccgtgtattctgcccagtggggatgcaatgccatatatagtatttgacttgaagtgatactgcatcttggaggatggtactgaaaccttgtgaaggcttgtttctgaactggcattgcagctctgtcttcaactggccatcacaatgcaccatcgggccagcagctttggggtcacatggtgtgcag-------tattaccagtggatccttggtcatgggccagcccactcctgcccctccagggttattgctataagatgggctattgagtcagaagtgatgttatgtggcatcctgtgccagtgaatcgaacacttcatagacccttgagcagagaacccatgggcaggaaaggcaaatctctatctggaactggtctctattcctgatcttt-caggaggggg---tccaa--tgtagtcatctgccacATGCCAGGCCaaaccaatctca-gttttgtcctcttc---agctggtgac-atgggagtcccccatgtggccattcgaatgagctgaggctgctggtgcctcagt----------------------------------------------gg-agatgatttggg i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5772058 804 - 180051392 agaccccatgtgcaaccccttctggatg-----------------------ccggga-t-gcgactcctcttcttacc-gctggccccttgatgcaaggacaagaaacccacagtgccaaggaggcggctgt--------------------------------------gcttagactttgagggactctggctgtgccacct--tgcagaagtattttctctttaggaacaaggacctctaaacctacagaagccagagttga-gggacagaaagcacaaattctccaagtgggccact-----------------gggccacttaagcttctacccctaaattcctagacccatgtattctgcccagtggggatgcagtgccatatatagtatttgatttgaagtgattctgcatcttggaggatggtcctgaaacgttgtgaaggcttgtttctgaactggcattgcagctctgtcttcagcgggccatcacaatgcaccatcggcccagcagctttgggatcatgtggtgtgcag-------tattaccagtggatccctggtcatgggccagcccactcctgcccctccagggttattgctataagatgggctattgagtcagaagtgatgttatatggcatcctgtgccagtgaatcaaacacttcatagacccttgagtagagagcccacgggcaggaaaggcaaatctctatctggaacaggtctctattcctgatctttccaggaggggg---tccaa--tgtagtcatctgccacATGCCAGACCaaaccaatctca-gttttatcctcttc---agctggtgac-atgggagtcccccatgtggccattcaaatgagcggaggctgctggtgccacagc----------------------------------------------gg-ggatgatatggg i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5957982 804 - 181584905 agaccccatgtgcaaccccttctggatg-----------------------ccggga-t-gcgactcctcttcttacc-actggccccttgatgcaaggacaagaaacccacagtgccaaggaggcggctgt--------------------------------------gcttagactttgagggactctggctgtgccacct--tgcagaagtattttctctttaggaacaaggacctctaaacctacagaagccagagttga-gggacagaaagcacaaattctccaagtgggccact-----------------gggccacttaagcttctacccctaaattcctagacccatgtattctgcccagtggggatgcagtgccatatatagtatttgatttgaagtgattctgcatcttggaggatggtcctgaaacattgtgaaggcttgtttctgaactggcattgcagctctgtcttcagcgggccatcacaatgcaccatcggcccagcagctttgggatcatgtggtgtgcag-------tattaccagtggatccctggtcatgggccagcccactcctgcccctccagggttattgctataagatgggctattgagtcagaagtgatgttatatggcatcctgtgccagtgaatcaaacacttcatagacccttgaatagagagcccacgggcaggaaaggcaaatctctatctggaacaggtctctattcctgatctttccaggaggggg---tccaa--tgtagtcatctgccacATGCCAGACCaaaccaatctca-gttttatcctcttc---agctggtgac-atgggagtcccccatgtggccattcaaatgagcggaggctgctggtgccacagc----------------------------------------------gg-ggatgatatggg i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 988607 804 - 16193990 agaccccatgtgcaaccccttctggatg-----------------------ccggga-t-gcgactcctcttcttacc-gctggccccttgatgcaaggacaagaaacccacagtgccaaggaggcggctgt--------------------------------------gcttagactttgagggactctggctgtgccacct--tgcagaagtattttctctttaggaacaaggacctctaaacctacagaagccagagttga-gggacagaaagcacaaattctccaagtgggccact-----------------gggccacttaagcttctacccctaaattcctagacccatgtattctgcccagtggggatgcagtgccatatatagtatttgatttgaagtgattctgcatcttggaggatggtcctgaaacgttgtgaaggcttgtttctgaactggcattgcagctctgtcttcagcgggccatcacaatgcaccatcggcccagcagctttgggatcatgtggtgtgcag-------tattaccagtggatccctggtcatgggccagcccactcctgcccctccagggttattgctataagatgggctattgagtcagaagtgatgttatatggcatcctgtgccagtgaatcaaacacttcatagacccttgagtagagagcccacgggcaggaaaggcaaatctctatctggaacaggtctctattcctgatctttccaggaggggg---tccaa--tgtagtcatctgccacATGCCAGACCaaaccaatctca-gttttatcctcttc---agctggtgac-atgggagtcccccatgtggccattcaaatgagcggaggctgctggtgccacagc----------------------------------------------gg-ggatgatatggg i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1809245 804 - 21434487 agaccccatgtgcaaccccttctggatg-----------------------ccggga-t-gcgactcctcttcttacc-gctggccccttgatgcaaggacaagaaacccacagtgccaaggaggcggctgt--------------------------------------gcttagactttgagggactctggctgtgccacct--tgcagaagtattttctctttaggaacaaggacctctaaacctacagaagccagagttga-gggacagaaagcacaaattctccaagtgggccact-----------------gggccacttaagcttctacccctaaattcctagacccatgtattctgcccagtggggatgcagtgccatatatggtatttgatttgaagtgattctgcatcttggaggatggtcctgacacgttgtgaaggcttgtttctgaactggcattgcagctctgtcttcagcgggccatcacaatgcaccatcggcccagcagctttgggatcatgtggtgtgcag-------tattaccagtggatccctggtcatgggccagcccactcctgcccctccagggttattgctataagatgggctattgagtcagaagtgatgttatgtggcatcctgtgccagtgaatcaaacacttcatagacccttgagtagagagcccacgggcaggaaaggcaaatctctatctggaacaggtctctattcctgatctttccaggaggggg---tccaa--tgtagtcatctgccacATGCCAGGCCaaaccaatctca-gttttatcctcttc---agctggtgac-atgggagtcccccatgtggccattcaaatgagcggaggctgctggtgccacagc----------------------------------------------gg-ggatgatgtggg i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4771649 804 - 82825804 agaccccatgtgcaaccccttgtggatg-----------------------ccggga-t-gtgactcctcttcttacc-actggccccttgatgcaaggacaagaaacacacagtgccaaggaggtggctgt--------------------------------------gcttagactttgagggactctggctgtgccacct--tgcagaagtattttctctttaggaacaaggacctctaaacctacggaagccagagttga-gggacagaaagcacaaattctccaagtgggccact-----------------gggccacttaagcttctacccctaaattcctagaaccgtgtattctgcccagtggggatgcagtgccatatatagtatttgatttgaagtgattctgcatcttggaggatggtcctgaaacgttgtgaaggcttatttctgaactggcattgcagctctgtcttcagcgggccatcataatgcaccatcgggccagcagctttggggtcatgtggtgtgcag-------tattaccagtggatccctggtcatgggccagcccactcctgcccctccagggttattgctataagatgggctgttgagtcagaggtgatgttatatggcatcctgtgccagtgaatcaaacacttcatagacccttgagtagagagctcacaggcaggaaaggcaaatctctatctggaacaggtctctattcctgatctttccaggaggggg---tccaa--tgtagtcatctgccacATGCCAGGCCaaaccaatctca-gttttatcctcttc---agctggtgac-atgggagtcccccatgtggccattcaaatgagctgaggctgctggtgccacagc----------------------------------------------gg-ggacgatgtggg i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 277624 804 + 2521317 agaccccatgtacaaccccttctggatg-----------------------ccagga-t-gcgactcctcttcttacc-gctggccccttgatgcaaggacaagaaacccacagtgccaaggaggtggctgt--------------------------------------gcttagactttgagggactctggctgtgccacct--tgcagaagtattttctctttaggaacaaggacctctaaacctacagaagccagagttga-gggacagaaagcacaaattctccaagtgggccact-----------------gggccacttaagcttctacccctaaattcctagacccatgtattctgcccagtggggatgcagtgccatatatagtatttgatttgaagtgattctgcatcttggaggatggtcctgaaacgttgtgaaggcttgtttctgaactggcattgcagctgtgtcttcagcgggccatcacaatgcaccatcggcccagcagctttgggatcatgtggtgtgcag-------tattaccagtggatccctggtcatgggccagcccactcctgcccctccagggttattgctataagatgggctattgagtcagaagtgatgttatgtggcatcctgtgccagtgaatcaaacacttcatagacccttgcgtagagagcccacgggcaggaaaggcaaatctctatctggaacaggtctctattcctgatctttccaggaggggg---tccaa--tgtagtcatctgccacATGCCAGGCCaaaccaatctca-gttttatcctcttc---agctggtgac-atgggagtcccccatgtggccattcaaatgagcggaggctgctggtgccacagc----------------------------------------------gg-ggatgatgtggg i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1759322 803 - 2415367 agaccccatgtgcaacctcttctggatg-----------------------ccggga-t-gcgactcctcttcttacc-gctggccccttgatgcaaggacaagaaacccacagtgccaaggaggtggctgt--------------------------------------gcttagactttgagggactctggctgtgccacct--tgcagaagtattttctctttgggaacaaggacctctacacctacggaagccagagttga-gggacagaaagcacaaattctccaagtgggccact-----------------gggccacttaaccttctacccctaaattcctagacccgtgtattctgcccagtggggatccagtgccatgtatagtatttgatttgaagtgattctgtatcttggaggatggtcctgaaacgttgtgaaggcttgtttctgaactggcattgcagctctgtcttcaacgggccatcacaatgcaccatcgggccagcagctttggggtcatgtggtgtgcag-------tattaccagtggatccctggtcatgggccagcccactcctgcccctcca-ggttattgctagaagatgggctattgagtcagaagtgatgttatgtggcatcctgtgccagtgaatcaaacacttcatagacacttgagtagagagcccacgggcaggaaaggcaaatctctatctggaacaggtctctattcctgatctttccaggaggggg---tccaa--tgtagtcatctgccacATGCCAGGCCACATCAACCTCA-GTTTTATCCTCTTC---AGCTGGTGAC-ATGGGAGTCccccatgtggccattcaaatgagctgaggctgctagtgccacagc----------------------------------------------gg-ggatgatgtggg i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64103031 786 + 204313951 agtccccaagtacaaccccttctggatg-----------------------ccagga-t-gtgactcctcttcttatc-tctggccccctgatgcaagaacaagaaatccagagtgccaaggaggtggcagt--------------------------------------tctttgactttgagggactctggctttgtcacct--tgcagaaatattgtctctttggaaacaaggacatctagacctacagaacctagagctga-gggacagaaagcacaaattctgtaagtgggccact-----------------gggccacttaagtttctacccctaagttcctagacctgtgcattctgcccagtggg-atgcagtgccatatgtagtatttgacttggagtgatactgcgtcttggagggtggtactgaaaccttgtgaaggcttgtttttgaactgacattgcagctctgtcttcgacatgccatcacaatgcaccatcgggccagcagctctggggtcatgtggtgggcag-------tattaccagtgggtccctggtcatgggccagcccactcctgcccctccagggttattgctataagatgggctgttgagtcagaagtgatgttatgtggcatcctgtgccagtgaatcacacacttcataaacccttgagtagagagcccacaggcaggaaaggcaaatgtctatctggaaaaggtctctattcctggtcttttcaggagggga----ccag--tgtagtcatctgccacATGCCAAGCCaaaccaatctca-gttttatcctcttc---agctggtggc-atgggagtcccccatgtggccatttgtatgagctgagg--------------------------------------------------------------gt-ggatgacgtggg i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2228509 848 + 10068113 agtcccaaagtgcaaccccttctggatg-----------------------ccagga-t-gtgactcctcttcttacc-gctggctccctgatgcaaggacaagaaacccagagtgccaaggaggcggcaat--------------------------------------gctttgac-ttgagggactctggctttgtcacct--tgcagaaatcttgtctcttcggaaacgaggactcctagacctacagaacccagagttga-gggacagagagcacagactctcaaagtgggccact-----------------gggccacttaagctcctacccctaggttcctggatctgtgtattctgcccagtgggtgtgcagtgccatgtgtagtatttgacttcgagtggtactgcatcttggaggatggtactgaaaccttgtgaaggcttgtttcggaactgacattgcagctctgtcttcaacaggccatcacaatgcaccatcgggccagcagctttggggtcatgtggtgggcag-------tattatcagtggatgcctggtcatggcccagcccactcctgcccctccagggttattgctataagatgggctgttgagtcagaagtgatgttatgtgaactcctgtgccagcgaatcacacacttcataaacccctgagaagagagcccacaggcaggaaaggcaaatgcctgtctggaacaggtctctattcctggtcttttcaggagggga----ccaa--tgtagtcagctgccacatgccaagtcaaaccaatctca-gttttatcctcttc---agctggtggc-atgggagtcccccatgtggctatttgtatgagctgagggtgctggtaccacagtgtggatgacgtgggagGCAAAGGTTGCAGTGAGAAGGTACCGCAGTGT-GGATGACGTGGG i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 83485 797 - 709587 agtccccaagtgcaaccccttctggatg-----------------------ccagga-t-gtgactcctcttcttact-act-gccccccgatgcaaggatgagaagcccagagtgccaaggaggtggcagt--------------------------------------gctttgactgtgaggaactctggctttgtcacct--tgcagaaatattgtctctttggaaacaaggacttctagacctacagaactcagagttga-gggacagcaagcacaaattctctaagtgggccact-----------------gggccacttaagcttctacccctaggttcctagacctgtgtattctgcccat-----atgtagtgccatatgtagtatttgacttgtggtgatactgcgtcttggaggatggtactgaaaccttgtgaaggcttgtttctgaactgacattgcagctctgtcttcaacaggccatcataatgcaccatcgggccagcagctttggggtcatgtggtgggcag-------tattaccagtggatccctggtcatgggccagcctactcctgcccctccagggctattgctataagatgggctgttgagtcagaagtgatgttatgtggcctcctatgccagcgaatcacacacttcataaacccctgagtagagagcccacaggcaggaaaggcagatgtctatctggaacaggtctctattcctggtcttttcaggagggga----ccaa--tgtagtcatctgccacATGCCAAGCCAAACCAATCTCA-GTTTTATCCTCTTC---AGCTGGTGGC-ATGGGAGTCCCCCATGTGGCCATTTGTATGAGCTGAGGGTGCTGGTACCACAGT----------------------------------------------GT-GGATGACGTGGG i cebCap1.NW_016107999v1 C 0 I 205 s aotNan1.NW_018501968v1 1183659 795 - 2246441 agtccccaagtgcaaccccttctggatg-----------------------ccagga-t-gtcactcctcttcttacc-gct-ggcccctgatgcaaggacaagaaacccagagtgccaaggaggcggcagt--------------------------------------gctttgtctttgagggactctggctttgtcacct--tgcagaaatattgtgtctttggaaacaaggacttctagacctacagaacccagagttga-gggacagaaagcacaaattctctaaatgggcc-ct-----------------gggccacttaagcttctacccttaggttcctagacccgtgtattctgcccagtggggatgcagtgccatatgtagtatttcacttggagtgatactgcgtcttggaagatggtactgaaaccttgtgaaggcttgtttctgaactgacattgcagctctgtcttcaacaggccatcacaatgcaccattgggccggcagctttggggtcatgtggtgggcag-------tattaccagaggatccctggtcatgggccagcccactcctgcccctccagggttattgctataagatgggctgttgagtcagaagtgatgttatgtggcatcctgtgccagtgaatcacacacttcataaacccctgagtagagag------ggcaggaaaggcacatgtctatctggaacaggtctctcttcctggtcttttcaggagggga----ccaa--tgcagtcatctgccacATGCCAAGCCaaaacaatctca-gtttcctcctcttc---agctggtggc-atgggaatcccccatgtggccatttgtatgagctgagggtgctggtaccacagt----------------------------------------------gt-ggatgacgtggg i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1253347 798 + 48283576 -tactccACATGGAAC--TTTCTTGAtg-----------------------ccagcagg-gtgagtcctcttcttgcctgctggtctcttgac------atgaggagctcaaagtgagaaggagggagctgt--------------------------------------gcttatagtttaaaggactctggctatgtcaact--ggcagaagtgtcct-tccttgggaacgaggacctctaaacccccagtacccagagctga-gggacagagggcacacgctacctcactgcggtgctaggagagatgttcagcagggccacgcccgcttctacctgttggttcctgggtttgtgtgttccactccgtggggacacagtaccatagagggtattggattcaaactgatactgtatcctggaggacggtactgaagcctcatgaaatgttgtctctgaattggtgtttcagctctgccttcaacaggccatcac-atgctccctcaggccggcaggtctgag-taatgtggtgtatggctccacacattaccagtgga--------------ccagcccactcc-acacctcctggctgattgctacaagataggct-----gccaggagtgatg-tatgtcagagctcatgccaatt-atcaactactttataaattcttgagtagAGAGCTCATGAGCAGGAAAGCCAAATTTATACATAGACTATCTCTCTATTCCTGGTTTTCCTAAGAGGGGT----CTAAGGTGGAGTCACCTGCCACCTTCCAAGCCAAGTCAATCTCAGGTTTTAGCCTCTTC---AGCTGCTGGTAATGGGATTCctctatgtggccatttgaatgaaccgagg--gctggtaccacagt----------------------------------------------ggttggtgacagagg i otoGar3.GL873522 C 0 C 0 s canFam3.chr4 37183794 822 + 88276631 tgtccccaagtgtgacttcctcctgatgaccagagtaatcagttgctctgaccagaa-tagcgacgattcttgcta---gctggttccctgac------tcaagaagcccgaagtaccaaggaggtggctgtagtctatagtttattttttattttattttatttttgtagtctatagtttaagggactcttcctgtgcccactaaagaaaaggtaccttccctttgggaacaagg-------tgcccacagaacccagagttgagggggtggagagcacagattc-ctacatgggtcactgggagtgatggtaagctgggccacttcagcgtcctccccttgtttcttagacccatgtatcccacccactggggacacagtgtcatataagatatttgatttaaagtgatactgtgtcttggaggatgatgcccaaatctcatgatgtactgtttctgaggtcgcttttcagctatgtctc-agcaggctgttattctgctccatctggccagtagcttttggggtgtgtgatg----g-----------------------------------cagctcactcccccaccttctgggttattgctataagattggttatttggtctgaagtgatgttatgtgggatcaagtacctgtggatctaacacctcatatgctgttgtgtagaaag-ccgtgggcaaggaagagcaatctgtgtcaggaacatgtctatattcctggtctttctatggtggaagagtccaa--agtcatcatctaccacATAATGACCCAAATCAATCTAAGGTTTTGTCCTCCTCTGTAGCTGGTGGC-CCAGGA---TCCCAGGTG------------------GGGTACCAGTCCAACAGTA---------------------------------------------GG-GGATGACAGGA- i canFam3.chr4 C 0 C 0 a score=640454.000000 s hg38.chr5_KI270795v1_alt 72089 60 + 131892 gtctgggcta----cctgccgtgtagcttgctggtgtcctcaaggcgtgctcatgtttgacccg s panTro5.chr5 5322324 60 - 181907262 gtctgggcta----cctgccgtgtagcttgctggtgtcctcaaggcgtgctcatgtttgacccg i panTro5.chr5 C 0 C 0 s panPan2.chr5 5584735 60 - 183735486 gtctgggcta----cctgccgtgtagcttgctggtgtcctcaaggcgtgctcatgtttgacccg i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1714614 60 + 3967317 gtctgggcta----cctgccatgtagcttgctggtgtccccaaggcgtgctcatgtttgacccg i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4591454 60 + 163208435 gtctgggcta----cctgccgtgtagcttgctggtgtcctcaaggcctgctcatgtttgacccg i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5772862 60 - 180051392 gtctgggcta----cctgccatgtagcttgctagtgtcctcaaggcctgctcatgtttgatctg i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5958786 60 - 181584905 gtctgggcta----cctgccgtgtagcttgctagtgtcctcaaggcctgctcatgtttgatctg i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 989411 60 - 16193990 gtctgggcta----cctgccgtgtagcttgctagtgtcctcaaggcctgctcatgtttgatctg i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1810049 60 - 21434487 gtctgggcta----cctgccgtgtagcttgctggtgtcctcaaggcctgctcatgtttgacctg i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4772453 60 - 82825804 gtctgggcta----cctgccgtgtagcttgctggtgtcctcaaggcctgctcacgtttgacccg i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 278428 60 + 2521317 gtctgagcta----cctgccgtgtagcttgctggtgtcctcaaggcctgctcatgtttgacctg i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1760125 60 - 2415367 gtctgggcta----cctgccgtgtagcttgctggtgtcctcaaggcctgctcacgtttgacctg i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64103817 60 + 204313951 ggctgggcta----cttgccgcatagcttgctggtgtcctcaaggcctgctcatgtttgatctg i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2229357 60 + 10068113 GGCTAGGCTA----CCTGCCGCATAGCTTGCTGGTGTCCTCAAGGCCTGCTCATGTTTGATCCA i saiBol1.JH378186 C 0 C 0 s aotNan1.NW_018501968v1 1184454 64 - 2246441 ggctgggctacttgcctgccacgtagcttgctggtgtcctcaaggcctgctcatgtttgatccg i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1254145 60 + 48283576 gtctgggcta----cctgctatgtagctggatggtgtccttgagtcctgctcatgtttggccca i otoGar3.GL873522 C 0 C 0 s canFam3.chr4 37184616 59 + 88276631 GTCT-TTCTA----CCTACTGTGCAGCTTGCTGGTGAACACAAGTCCTGCTCATATTCAACTCA i canFam3.chr4 C 0 C 0 e cebCap1.NW_016107999v1 84282 205 - 709587 I a score=1323507.000000 s hg38.chr5_KI270795v1_alt 72149 136 + 131892 ggatgtccccaccatgttagattgattgattgggtctggcagacccagctcatgacaggcagttccagctgcctgatcactcggtgtctcatgtctgggtgttgtgtgtcacatgag---------------------------------------------------------------ggctagtagcacaggcaca s panTro5.chr5 5322384 136 - 181907262 ggatgtccccaccatgttagattgattgattgggtctggcagacccagctcatgacaggcagttccggctgcctgatcactcggtgtctcatgtctgggtgttctgtgtcacatgag---------------------------------------------------------------ggctagtagcacaggcaca i panTro5.chr5 C 0 C 0 s panPan2.chr5 5584795 136 - 183735486 ggatgtccccaccatgttagattgattgattgggtctggcagacccagctcatgacaggcagttccggctgcctgatcactcggtgtctcatgtctgggtgttctgtgtcacatgag---------------------------------------------------------------ggctagtagcacaggcaca i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1714674 135 + 3967317 ggatgtccccaccatgttagattgattgattgggtctggcagacccagctcatgacaggcagttccggctgcctgatcactc-gtgtctcatgtctgggtgttctgtgtcacatgag---------------------------------------------------------------ggctagtagcacaagcaca i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4591514 136 + 163208435 ggatgtccccaccatgttagattgattgattaggtcgggcagacccagctcatgacaggcagttctggctgcctgatcactcggtgtctcatgtctgggtgttctgtgtcacacaag---------------------------------------------------------------ggctagtagcacaagcaca i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5772922 129 - 180051392 ggatgttctcaccatgttagattgactg----ggtctggcagacccagctcatgacaggcagttccggctgcctgatcactcggtatctcacgtctgggtgttctgtgtcacacaag---------------------------------------------------------------gtctaggagcactag---a i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5958846 129 - 181584905 ggatgttctcaccatgttagattgactg----ggtctggcagacccagctcatgacaggcagttccggctgcctgatcactcggtatctcacgtctgggtgttctgtgtcacacaag---------------------------------------------------------------gtctaggagcactag---a i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 989471 129 - 16193990 ggatgttctcaccatgttagattgactg----ggtctggcagacccagctcatgacaggcagttccggctgcctgatcactcggtatctcacgtctgggtgttctgtgtcacacaag---------------------------------------------------------------gtctaggagcactag---a i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1810109 129 - 21434487 ggatgttctcaccatgttagattgactg----ggtctggcagacccagctcatgacaggcagttccggctgcctgatcactcggtatctcacgtctgggtgttctgtgtcacacaag---------------------------------------------------------------gtctaggagtactag---a i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4772513 129 - 82825804 ggatgttcccaccatgttagattgactg----ggtctggcagacccagctcctgacaggcagttccggctgcctgatcactcggtatctcacgtctgggtgttctgtatcacacaag---------------------------------------------------------------gtctaggagcactag---a i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 278488 129 + 2521317 ggatgttctcaccatgttagattgactg----ggtctggcagacccagctcatgacaggcagttccggctgcctgatcactcggtatctcacctctgggtgttctgtgtcacacaag---------------------------------------------------------------gtctaggagtactag---a i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1760185 120 - 2415367 ggatgttcctaccatgttaaattgactg----ggtctggcagacccagctcatgacaggcagttccggctgcctgatcactcggta---------tgggtgttctgtgtcacacaag---------------------------------------------------------------gtctaggagcactag---a i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64103877 132 + 204313951 ggatgtccctaccatgttagactgattg----ggtctgtcagacccagcttatgacaggcagttctggctgcctgatcacttggtgtctcaagtctgggtgttctgtgtcacaccag---------------------------------------------------------------ggctggtagcacaaacaca i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2229417 132 + 10068113 GGATGTCCTCACCATGTTAGACTGACtg----ggtctggcagacccagctcatgacaggcagttctggctgcctgatcacccggtgtctcaagtctgggtgttctgtgtcacaccag---------------------------------------------------------------ggctggtagcacaaacaca i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 84487 132 - 709587 GGATGTCCCCACCATGTTAGACTGACtg----gatctggcagacccagctcatgacaggcagttctggctgcctgattacccggtgtctcaagtctgggtgttctgtgtcacaccag---------------------------------------------------------------ggctggtagcacaaacaca i cebCap1.NW_016107999v1 I 205 C 0 s aotNan1.NW_018501968v1 1184518 132 - 2246441 ggatgcccccaccatgttagactgattg----ggtctggcagacccagctcatgacaggcagttctggctgcctgatcactcggtgtctcaagtctaggtgttctgtgtcataccag---------------------------------------------------------------ggctggtagcacaaacaca i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1254205 192 + 48283576 ggatgtacTCACTG---AAgacctgggg----gatctagtagacccagctcataacaggcagctctggttgcacagttacttggtgtctcgtgagggggtgttctgtctttaacaagAAAGCCTATCAGGACCTGGTTTTCCCTCCAgaaatgggatctgtctctgttgcctaaattggagtgcagtggtacaatcaga i otoGar3.GL873522 C 0 I 210 s canFam3.chr4 37184675 127 + 88276631 GGATA-Acccactttct--gactccgtg----gttctgacagacccaactcatgatgggcagttctgggtacatgatcacttgatgtctcataatcgagcactctgtct-gtgccag---------------------------------------------------------------agctaggagcac-accaca i canFam3.chr4 C 0 C 0 a score=3613794.000000 s hg38.chr5_KI270795v1_alt 72285 328 + 131892 ccaggacctg-ttttcagaaggtgaataatcctttgctgctaattgtaa---ttcactcccaaattttagggagtctccagatcctaagggattctcccactggagcttgc-att-cttcactg-gcatctcttcctatcact----cacatggctgacaccatagggtctgctgagtactgtatggctcaagggatggggttgatggctccagcagcctgacacttttgcagaatcctttcttgctctggg----------ccttggcagcctttcatggcattggcatatggggttggagcagtattcctagctatgaaatatgttgcctccagatctac----ctatcag s panTro5.chr5 5322520 328 - 181907262 ccaggacctg-ttttcaaaaggtgaataatcctttgctgctaattctaa---ttcactcccaaattttagggagtctccagatcctaagggattctcccactggagcttgc-att-cttcactg-gcatctcttcctatcact----cacatggctgacaccatagggtctgctgagtactatatggctcaagggatggggttgatggctccagcagcctgacacttttgcagaatcctttcttgctctggg----------ccttggcagcctttcatggcattggcatatggggttggagcagtattcctagctatgaaatatgttgcctccagatctac----ctatcag i panTro5.chr5 C 0 C 0 s panPan2.chr5 5584931 328 - 183735486 ccaggacctg-ttttcaaaaggtgaataatcctttgctgctaattgtaa---ttcactcccaaattttagggagtctccagatcctaagggattctcccactggagcttgc-att-cttcactg-gcatctcttcctatcact----cacatggctgacaccatagggtctgctgagtactatatggctcaagggatggggttgatggctccagcagcctgacacttttgcagaatcctttcttgctctggg----------ccttggcagcctttcatggcattggcatatggggttggagcagtattcctagctatgaaatatgttgcctccagatctac----ttatcag i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1714809 328 + 3967317 ccaggacctg-ttttcaaaaggtgaataatcctttgctgctaattgtta---ttcactcccaaattttagggagtctccagatcctaagggattctcccactggagcttgc-att-cttcactg-gcatctcttcctatcact----cacatggctgacaccatagggtctgctgagtactgtatggctcaagggatggggctgatggctccagcagcctgacacttttgcagaatcctttcttgctctgga----------ccttggcagcctttcatggcattggcatatggggttggagcagtattcctagctatgaaatatgttgcctccagatctac----ctatcag i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4591650 328 + 163208435 ccaggacctg-ttttcaaaaggtgaataatcctttgctgctaattgtaa---ttcactcccaaattctagggagtctccagatcctaagggattctcccattggagcttgc-gtc-cttcacag-gcatctcttcctatcact----cacatggctgacaccatagggtctgctgagtactgtatggctcaagggatggggctgatggctccagcagcttgacacttctgcagaatcctttcttgctctggg----------ccttggcagcttttcgtggcactcgcatatggggttggagcagtattcccagctatgaaatatgttgcctccagatctac----ctatcaa i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5773051 339 - 180051392 ccaggacctg-ttttcaaaaggtgtataatcctttgctgctaattgtaaggattcactcccaaattctagggagtctccagatcctaagggattctcccactgtagcttgc-gtc-cttctctg-gcatctcttcctgtcact----cacatggctgacaccatagggtctgctgagt--tgtatggctcaagggatggggctgatggctccagcagcctggtacttctgcagagtcctttcttgctctgggaagaaaggactcttggcagcctttcatggcactggcctacagggttggagcagtattcccagctatggaatatgttacctccagacctac----ctgtcag i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5958975 339 - 181584905 ccaggacctg-ttttcaaaaggtgtataatcctttgctgctaattgtaaggattcactcccaaattctagggagtctccagatcctaagggattctcccactgtagcttgc-gtc-cttctctg-gcatctcttcctgtcact----cacatggctgacaccatagggtctgctgagt--tgtatggctcaagggatggggctgatggctccagcagcctgatacttctgcagagtcctttcttgctctgggaagaaaggactcttggcagcctttcatggcactggcctacagggttggagcagtattcccagctatggaatatgttgcctccagacctac----ctgtcag i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 989600 339 - 16193990 ccaggacctg-ttttcaaaaggtgtataatcctttgctgctaattgtaaggattcactcccaaattctagggagtctccagatcctaagggattctcccactgtagcttgc-gtc-cttctctg-gcatctcttcctgtcact----cacatggctgacaccatagggtctgctgagt--tgtatggctcaagggatggggctgatggctccagcagcctggtacttctgcagagtcctttcttgctctgggaagaaaggactcttggcagcctttcatggcactggcctacagggttggagcagtattcccagctatggaatatgttgcctccagacctac----ctgtcag i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1810238 339 - 21434487 ccaggacctg-ttttcaaaaggtgtataatcctttgctgctaattgtaaggattcactcccaaattctagggagtctccagatcctaagcgattctcccactgtagcttgc-gtc-cttctctg-gcatctcttcctgtcact----ctcatggctgacaccatagggtctgctgagt--tgtatggctcaagggatggggctgatggctccagcagcctgatacttctgcagagtcctttcttgctctggggagaaaggactcttggcagcctttcatggcactggcctacagggttggagcagtattcccagctatggaatatgttgcctccagacctac----ctgtcag i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4772642 329 - 82825804 ccaggacctg-ttttcaaaaggtgtataatcctttgctactaattgtaaggattcactcccaaattctagggagtctccagatcctaagggattctcccaccatagcttgc-gtc-cttctctg-ggatctcttcctatcact----cacatggctgacaccatagggtctgctgagt--tgtatggctcaagggatggggctgatggctccagcagcctggtacttctgcagagtgctttcttgctccggg----------ccttggcagcctttcatggcactggcctacagggttggagcagtattcccagctatggaatatgttgcctccagacctac----ctgtcag i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 278617 339 + 2521317 ccaggacctg-tcttcaaaaggtgtataatcctttgctgctaattgtaaggattcactcccaaattctagggagtctccagatcctaagggattctcccaccgtagcttgc-gtc-cttctctg-gcatctcctcctgtcact----ctcatggctgacaccatagggcctgctgagt--tgtatggctcaagggatggggctggtggctccagcagcctgatacgtctgcagagtccttccttgctctgggaagaaaggactcttggcagcctttcgtggcactggcctacagggctggagcagtattcccagctatggaagatgttgcctccagacctac----ctgtcag i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1760305 329 - 2415367 ccaggacctg-ttttcaaaaggtgtataatcctttgctgctagtggtaagggttcaatcccaaattctagggagtctccagatcctaagggagtctcccactgcagcttgc-atc-cttctctg-gcatctcttcctatcact----cacatggctgacaccatagggtctgctgagt--tgtatggctcaagggatggggctgatgggtccagcagcctggtacttctgcagagtcctttcttgctctggg----------ccttggcagcctttcatggcactggcctacagggttggagcagtattcccagctatggaatatgttgcctccagacctac----ctgtcag i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64104009 332 + 204313951 ccaggacctg-ttttcaaaa-gtgtataatcctttgctgctaattgtaaggatttgctcctaaatcctagggagtctcgagatcctaagggattctcccactggagcttgg-gtc-tgtcactg-gcatctcttcctatcact----cacatggctgacaccatagggtctgctgagc--tgcgtggcttaagggatagggctgacggccccagcagcctgacgcttctgcagagtcctttcttgctctgcg----------ccttggcagcctttcagggcactggcatacagggttggagcaggattctcagctatggaatatgttgtctccagacctacctatctatcag i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2229549 326 + 10068113 ccaggacctg-ttttcaaaa-gtgtataatcctttgctgctaattgtaaggatttgctcccaaatcctagcgagtctcgagatcctaagggattctcccactggagcttgg-gtc-catcactg-gcatctcttcctatcact----cacatggctgacaccatagggtctgctgagc--tgtatggcttaagtgatagggctga-ggcccc-gcagcctgacgcttctgcagagtcctttcttgctctggg----------ccttggcagcctttcagggcactgccatacaggattggagcagtgttctcagctatggaatatgctgtctccagacctac----ctatcag i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 84619 328 - 709587 ccaggacctg-ttttcaaaa-gtgtataatcctttgctgctaattgtaaggatttgctcccaaatcctagggagtctcgagatcctaagggattctcccactggagcttgg-gtc-catcattg-gcatctcttcctatcatt----cacatggctgacaccatagggtctgctgagc--tgtatggcttgagggatagggctgatggcccccgcagcctgacgcttctgcagagtcctttcttactctggg----------ccttggcagcctttcagggcactgccatacagggttggagcagtattctcagctatggaatatgttgtctccagacctac----ctatcag i cebCap1.NW_016107999v1 C 0 I 6 s aotNan1.NW_018501968v1 1184650 328 - 2246441 ccaggacctg-ttttcaaaa-gtgtataatcctttgctgctaattgtaaggatttgctcccaaatcctagggagtctcgagatcctaagggattcttgcactggagcttgg-gtc-cgtcactg-gcatctcttcctatcact----cacatggctgacaccatagggtctgctgagc--tgtatggcttaaggggtagggctgacggccccagcagcctgacgcttctgcagagtcctttcttgctctggg----------tcttggcagcctttcagagcactgccatacagggttggagcagtattctcagctatggaatatgttgtctccagacctac----ctatcag i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1254607 322 + 48283576 CTAGGACCTGTTTTTCAAAAAGTATATAATTATTTGCTGCAAATTATATGGActcactcccaa--tcccaggagtctccaagtcctagggcactctggcattggaacttgctgca-cttccgtg-gca-ctctttctgtcact----cacat--cccacgccacagggtctgctgagt-----atggcctgcatgatggggctga-gttcccagcagcctgaacctttttcagagtcctttcttactctgag----------ctttggcagcctttcatgatacctggcctcagggttagagcaatattcccaggtgtggaatatgctgcctccagaaccac----ctttcag i otoGar3.GL873522 I 210 C 0 s canFam3.chr4 37184802 292 + 88276631 ----accctt-ttctcaaaacatgtataattcttcactacaaattatatgcacttgctccagaatttctgggg--------------------tatcccctcaaagcttgt-ggcacttcacagagcaccctttcctgtcactgtcctatatgtctaacatcatacagtttactgagt--ctgatggcccaagccatacaggtgctggtgccgacaacctgaacctttagcagagttcttccttgctctggg----------ccttggcagcccttcatgtcaT-------------------agtactcccaggtatgaaatattttgcttctaaacttac----ctatcag i canFam3.chr4 C 0 C 0 a score=117390.000000 s hg38.chr5_KI270795v1_alt 72613 20 + 131892 gtgttaggatttcttcttca s panTro5.chr5 5322848 20 - 181907262 gtgttaggatttcttcttca i panTro5.chr5 C 0 C 0 s panPan2.chr5 5585259 20 - 183735486 gtgttaggatttcttcttca i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1715137 20 + 3967317 gtgttaggatttcttcttca i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4591978 20 + 163208435 gtgttaggatttcttcttca i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5773390 20 - 180051392 gtgttaggatttcgtcttca i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5959314 20 - 181584905 gtgttaggatttcgtcttca i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 989939 20 - 16193990 gtgttaggatttcgtcttca i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1810577 20 - 21434487 gtgttaggatttcatcttca i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4772971 20 - 82825804 gtgctaggatttcttcttca i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 278956 20 + 2521317 gtgttaggatttcgtcttca i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1760634 20 - 2415367 gtgttaggatttcttcttca i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64104341 10 + 204313951 ctgttatgac---------- i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2229875 10 + 10068113 ctgttacgac---------- i saiBol1.JH378186 C 0 C 0 s aotNan1.NW_018501968v1 1184978 10 - 2246441 ctgttacgac---------- i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1254929 19 + 48283576 gtattgtaatat-ttcttca i otoGar3.GL873522 C 0 C 0 s canFam3.chr4 37185094 20 + 88276631 atgctgtgctttcttcttta i canFam3.chr4 C 0 C 0 e cebCap1.NW_016107999v1 84947 6 - 709587 I a score=4387300.000000 s hg38.chr5_KI270795v1_alt 72633 386 + 131892 tggtgggaggtaaaagattaaataatttatctttgc--------------tttgtaggtatgtcccagtattcaccagaccattgaattcctagaaattttactaatgtggt-ggcctctc----gatcttcagtagttttctctctcaccctttggcttccagcatgctaggtaccgcttgtctatctgcctgatcagcatgatgacatcagtgtactggatcagtgtgatgttctgcaggatgtcc-g-atgatccagatctttttggatggtcatgacagagctctgatgaaagttgtgaatgtatactgttgtcccttccatgtgaatgtgaactctttctgattctctttcttgattgagatggaaatgagcatattcaccagattaatggcttc-ataacat s panTro5.chr5 5322868 386 - 181907262 tggtgggaggtaaaagattaaataatttatctttgc--------------tttgtaggtatgtcccagtattcaccagaccattgaattcctagaaattttactaatgtggt-ggcctctc----gatcttcagtagctttctctctcaccctttggcttccagcatgctaggtaccgcttgtctatctgcccgatcagcatgatgacatcagtgtactggatcagtgtggtgttctgcaggatgtcc-g-atgatccagatctttttggatggtcatgacagagctctgatgaaagttgtgaatgtatactgttgtcccttccatgtgaatgtgaactctttctgattctctttcttgattgagatggaaatgaacatattcaccagatcaatggcttc-ataacat i panTro5.chr5 C 0 C 0 s panPan2.chr5 5585279 386 - 183735486 tggtgggaggtaaaagattaaataatttatctttgc--------------tttgtaggtatgtcccagtattcaccagaccattgaattcctagaaattttactaatgtggt-ggcctctc----gatcttcagtagctttctctctcaccctttggcttccagcatgctaggtaccgcttgtctatctgcctgatcagcatgatgacatcagtgtactggatcagtgtgatgttctgcaggatgtcc-g-atgatccagatctttttggatggtcatgacagagctctgatgaaagttgtgaatgtatactgttgtcccttccatgtgaatgtgaactctttctgattctctttcttgattgagatggaaatgaacatattcaccagattaatggcttc-ataacat i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1715157 386 + 3967317 tggtgggaggtaaaagattaaataatttatctttgc--------------tttgtaggtatgtcccagtattcaccagaccattgaattcctagaaattttactaatgtggt-ggcctctc----gatcttcagtagttttctctctcaccctttggcttccagcatgctaggtaccgcttgtctatctgcctgatcagcatgatgacatcagtgtactggatcagtgtgatgttctgcaggatgtcc-g-atgatccagatctttttggatggtcatgacagagctctgatgaaagttgtgaatgtatactgttgtcccttccatgtgaatgtgaactctttctgattctctttcttaattgagatggaaatgaacatattcaccagattaatggcttc-ataacat i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4591998 387 + 163208435 tggtgggaggtgaaaaattaaataatttatctttgc--------------tttgtaggtatgtccaagtattcactagaccattgaattcctagaaattttactaatgtggc-ggcctctc----gatcttcagtagttttctctctcatcctttggcttccagcatgataggtaccgcttgtctatctgcctgatcagcatgatgacatcagtgtactggatcagtgtgatgttctgcaggatgtct-g-atgatccagatctttttggatggtcatgacagagccctgatgaaaattgtgaatgtatactgttgtcccttccatgtgaatgtgaactctttctgattctctttcttgattgagatagaaatgaacatattcaacagattaatggcttcaataacat i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5773410 400 - 180051392 tggtaggaggtaaaagattagataatttgtccttactttgtaggactaattttgtaggtatgtcccagtattcaccagaccattgaattcctagaaattttactcatgtggt-ggcctctt----catcttcagtagttttctctctcaccctttggcttccggcatgctaggtactgcttgtctgtctgcctggtcagcacgatgacatctgtgtactggatcagcgtgatgttctgcagggtgtcc-g-atgatccagatctttttggatggtcatgacagagccctgatgaaacttgtgaatgtatactgttgtcccttccatgtgaatgtgaactctttctgattctctttcttgattgagatggaaatgaacatattcaccagattaatggcttc-ataacat i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5959334 400 - 181584905 tggtaggaggtaaaagattagataatttgtccttactttgtaggactaattttgtaggtatgtcccagtattcaccagaccattgaattcctagaaattttactcatgcggt-ggcctctt----catcttcagtagttttctctctcaccctttggcttccggcatgctaggtactgcttgtctgtctgcctggtcagcacgatgacatccgtgtactggatcagcgtgatgttctgcagggtgtcc-g-atgatccagatctttttggatggtcatgacagagccctgatgaaaactgtgaatgtatactgttgtcccttccatgtgaatgtgaactctttctgattctctttcttgattgagatggaaatgaacatattcaccagattaatggcttc-ataacat i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 989959 400 - 16193990 tggtaggaggtaaaagattagataatttgtccttactttgtaggactaattttgtaggtatgtcccagtattcaccagaccattgaattcctagaaattttactcgtgtggt-ggcctctt----catcttcaatagttttctctctcaccctttggcttccggcatgctaggtactgcttgtctgtctgcctggtcagcacgatgacatccgtgtactggatcagcgtgatgttctgcagggtgtcc-g-atgatccagatctttttggatggtcatgacagagccctgatgaaacttgtgaatgtatactgttgtcccttccatgtgaatgtgaactctttctgattctctttcttgattgagatggaaatgaacatattcaccagattaatggcttc-ataacat i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1810597 400 - 21434487 tggtaggaggtaaaagattaaataatttgtccttactttgtaggactaattttgtaggtatgtcccagtattcaccagaccattgaattcctagaaattttactcatgtggt-ggcctctt----catcttcagtagttttctctctcaccctttggcttccggcatgctaggtactgcttgtctgtctgcctggtcagcacgatgacatccgtgtactggatcagcgtgatgttctgcagggtctcc-g-atgatccagatctttttggatggtcatgacagagccctgatgaaaattgtgaatgtatactgttgtcccttccatgtgaatgtgaactctttctgattctctttcttgattgagatggaaatgaacatattcaccagattaatggcttc-ataacat i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4772991 400 - 82825804 tggtaggaggtaaaagattaaataatttgtccttactttgtaagactaattttgtaggtatgtcccagtattcaccagaccattgaattcctagaaattttactcatgtggt-ggcctctt----catcttcagtagttttctctctcaccctttggcttccggcatgctaggtactgcttgtctatctgcctgatcagcacgatgacatccgtgtactggatcagcatgatgttctgcggggtgtcc-c-atgatccagatctttttggatggtcatgacagagccctgatgaaaattgtgaatgtatactgttgtcccttccatgtgaatgtgaactctttctgattctctttcttgattgagatggaaatgaacatattcaccagattaatggcttc-ataacat i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 278976 400 + 2521317 cggtaggaggtaaaagattaaatactttgtccttactttgtaggactaattttgtaggtatgtcccagtattcacccgacccttgaattcctagaaattttactcacgtggt-ggcctctt----catcttcagtagttttctctctcaccctttggcttccggcatgctaggtactgcttgtctgtctgcctggtcagcacgatgacatccgtgtactggatcagcgtgatgttctgcagggtctcc-g-atgatccagatctttttggatggtcatgacagagccctgatgaaaattgtgaatgtatactgttgtcccttccatgtgaatgtgaactctttctgattctctttcttgattgagatggaaatgaacatattcaccagattaatggctcc-ataacat i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1760654 400 - 2415367 tggtaggaggtaaaagattaaataatttgtccttactttgtaggactaattttgtaggtatgtcccagtattcaccagaccattgaattcctagaaattttactaatgtggt-ggcctctt----gatctgcagtagttttctctctcaccctttggcttccggcatgctaggtactgcttgtctgtctgcctggtcagcctgatgacatccgtgtactggatcagtgtgatgttctgcagggtgtcc-g-atgatccagatgtttttggatggtcatgacagagccctgatgaaaactgtgaatatgtgctgttgtcccttccatgtgaatgtgaactctttctgattctctttcttgattgagatggaaatgaacatattcaccagattaatggcttc-ataacat i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64104351 379 + 204313951 tggtgggaggtaaaagatgaaataatttgtctttac--------------tttgtagatatgccccagtattcaccagaccattgaattcctagaaattttactgatat-gt-ggcctttc----aatctttagcagttttctctctcaccctttggcctccagcatgctaggtacctcttgcctatctgcctgatcagcatgttgacatcagtgtactgggtcaggttgatgttctgcaggttgtct-g-atgatctagatcttttggaatggtcataac--agccctggtgaaaa--gtgaacgtatactgttgtccctttcatgtgaatgtgtactctttctca--ttctttcttgattgagatggaaaagaacatatgcaccagattaatggcttc-ataacac i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2229885 379 + 10068113 tggtgggaagtaaaagatgaaataatttgtctttac--------------tttgtagctatgtcccagtattcaccagaccattgaatgcctagaaattgtactaatgtggt-ggcctctc----aatttttagtagttttctctctcaccctttggcctccagcaggctaggtacctcttgtctatctgcctgatcagcatgttgacat---tgtactggatcagggtgatgatctgcaggttgtct-g-atgatctagatcttttggaatgatcataacagagccctggtgaaaa--gtgaacgtatactgttgtccctttcatgtgaatgcatactctttcaca--ctctttctggaatgagatgaaaaagaacatattcaccagattaatggcttc-ataacat i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 84953 379 - 709587 tggtgcgaggtaaaagatgaaataatttgtctttac--------------tttgtagatatgtcccagtattcaccagaccattgaattcctagaaattgtactgatatggt-ggcctctt----aatctttagtagttttctctctcaccctttggcctccagcatggtaggtacctcttgtctatctgcctgatcagcatgttgacat---tgtactggatcagggtgatgttctgcaggttgtct-g-acgatccagatcttttggaatggtcataacagagccctggtgaaaa--gtgaacgtctactgttgtcccttccatgtgaatgtgtactctttctca--ctctttcttgattgagatggaaaagaacatattcaccagattaatggcttc-ataacat i cebCap1.NW_016107999v1 I 6 C 0 s aotNan1.NW_018501968v1 1184988 381 - 2246441 tggtgggaggtaaaagatgaaataatttgtctttac--------------tttgtagatatgtcccagtattcaccacaccattgaattcctagaaatgttactgatgtggt-ggcctctc----aatctttagtagttttctctctcaccctttggcctccagcatgctaggtacct-ttgcctatctgcctgatcagcatgttgacatcagtgtactggatcagggtgatgttctgcagggtgtct-g-acgatctagatcttttggaatggtcataacagagccctggtgaaaa--gtgaacgtatactgttgtccctttcatgtgaatgtgcactctttctca--ctctttcttgattgagatggaaaagaacatattcaccagattaatggcttc-ataacat i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1254948 377 + 48283576 ---tggaaggtgaaagatgaaataatttgtctttaa--------------attgaaggtatgtccccgtatctgccagaccactgaattgctagaaattttaatgatgcggt-aggccccctggggatctttgctagttttctctcttacccattggtctctagtggcctaggtatcccttgtttatctgcctgattggcatgatgtcatcagtgtgctggaccagtgtgacgctctgcaggatgtctgg-atgcttcaggtctttgtggactattatgatagagccctggtgaaaatggtgaatgtgtattaatgtttcttccacatgactatg-----------attctctttctggactgagattgaaaagaatgtattcaccaagttactggcttc-agaacac i otoGar3.GL873522 C 0 I 452 s canFam3.chr4 37185114 379 + 88276631 tgatgggaggtaaaaggggaaataatttgtc-------------------tttgaaggtgtgtcccagtctttactagaccacagaattcctagaaattttactgacacagtgggcccctg----gatcctcattagttttctttctcatcctcTGGCCTCCAGCAAGCtaggcacctattattcattggctcaagcagcatgacgtcgtcagtgtaatgggatggtgtgatattccgcagcatgtat-gaatggtcctgatctt---ggactaccatgacagagccctggtgaaagtggcgagtgtatgttgtcgtctctttcttataaacatgtgctgtttctgattctctctcttgattaggatataagagaatacactgagca-atcaatggcttt-gtaacat i canFam3.chr4 C 0 C 0 a score=982797.000000 s hg38.chr5_KI270795v1_alt 73019 124 + 131892 gtacctgaattcaa---------------ttttttttgagatggaatctcactctgtcacccaggctggagtgcagtggggcgtgatcttggctcac-acaacctttgcctcccagg-tgaagtgattctcctgcctcagc s panTro5.chr5 5323254 125 - 181907262 gtacctgaattcaa--------------tttttttttgagacagaatctcactctgtcacctaggctggagtgcagtggggcgcgatcttggctcac-acaacctttgcctcccagg-tgaagtgattctcctgcctcagc i panTro5.chr5 C 0 C 0 s panPan2.chr5 5585665 124 - 183735486 gtacctgaattcaa---------------ttttttttgagacagaatctcactctgtcacccaggctggagtgcagtggggcgcgatcttggctcac-acaacctttgcctcccagg-tgaagtgattctcctgcctcagc i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1715543 125 + 3967317 gtacctgaattcaa--------------tttttttttgagacggaatctcactctgtcacccaggctggagtgcagtggggtgcgatcttggctcac-acaacctttgcctcccagg-tgaagtgattctcctgcctcagc i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4592385 121 + 163208435 gtacctgaattcaa--------------tttttttttgagacggaat----ctctgtcacccaggctggagtgcagtggggcgtgatcttggctcac-acaacctttgcctcccagg-tcaagtgattctcctgcctcagc i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5773810 135 - 180051392 gtgtctgaattcag-----ttttttttttctttttttgagacagaatttcactctgtcacgcaggctgcagtgcagtggggtgtggtcttggttcac-acaaccttcgcctcccaggttcaagtgattctcctgcctcagc i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5959734 139 - 181584905 gtgtctgaattcag-ttttttttttttttctttttttgagacagaatttcactctgtcacgcaggctgcagtgcagtggggtgcggtcttggttcac-acaaccttcgcctcccaggttcaagtgattctcctgcctcagc i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 990359 136 - 16193990 gtgtctgaattcag----tttttttttttctttttttgagacagaatttcactctgtcacgcaggctgcagtgcagtggggtgcggtcttggttcac-acaaccttcgcctcccaggttcaagtgattctcctgcctcagc i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1810997 139 - 21434487 gtgtctgaattcag-tttgttttttttttctttttttgagacagaatttcactctgtcacgcaggctgcagtgcagtggggtgtggtcttggttcac-acaaccttcgcctcccaggttcaagtgattctcctgcctcagc i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4773391 137 - 82825804 gtgtctgaattca---gttttttttttttctttttttgagacagaattttgctctgtcactcaggctgcagtgcagtggggtgcggtgttggttcac-acaaccttcgcctcccaggttcaagtgattctcctgcctcagc i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 279376 138 + 2521317 gtgtctgaattcat--tttttttttttttctttttttgagacagaatttcactctgtcacgcaggctgcagtgcagtggggtgtggtcttggttcac-acaaccttcgcctcccaggttcaagtgattctcctgcctcagc i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1761054 140 - 2415367 gtgtctgaattcagttttgttttttttttctttttttgagacagaatctcgctctgtcacgcaggctgcagtgcagtggggtgcggtcttggctcac-acaactttcgcctcccaggttcaagtgattctcctgcctcagc i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64104730 115 + 204313951 gtacctgaagtcaa-------------tttttttttaaagacagaatcttgctctgtcacccaggctggagtatag-------------tggctcactgcaaactttgcctcccaggttcaagtgattctcctgcctcagc i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2230264 119 + 10068113 gtatccgaaatctg---------ttttttttttttttgagacaaaatctcggtctgtcacccaggctggagtatag-------------tggctcacggcaacctttgcctcccaggttcaagtaattctcctgcctcagc i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 85332 119 - 709587 atacctgaagtcaa---------ttttttttttttttgagacagaatcttgctctgtcacccaggctggagtatag-------------tggctcactgcaacctttgcctcccaggttcaagtgattctcctgcctcagc i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1185369 115 - 2246441 gtacctgaagtcaa-------------ttttttttttgagacagaatctcgctctgtcacccaggctggagtatag-------------tggctcactgcaacctttgcctcccaggttcaagtgatcctcctgcctcagc i aotNan1.NW_018501968v1 C 0 C 0 s canFam3.chr4 37185493 30 + 88276631 gtacttgatttcac--------------------------acaga--tctgctctagc----------------------------------------------------------------------------------- i canFam3.chr4 C 0 C 0 e otoGar3.GL873522 1255325 452 + 48283576 I a score=515858.000000 s hg38.chr5_KI270795v1_alt 73143 54 + 131892 ctcctgagtagctgggattacaggcgtgagccaccatgcctggcc-agtttttgt- s panTro5.chr5 5323379 53 - 181907262 ctcctgagtagctgggattgcaggcatgagccaccatgcctggcc-agtttttg-- i panTro5.chr5 C 0 C 0 s panPan2.chr5 5585789 53 - 183735486 ctcctgagtagctgggattgcaggcatgagccaccatgcctggcc-agtttttg-- i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1715668 53 + 3967317 ctcctgagtagctgggattacaggcatgagccaccatgcctggcc-agtttttg-- i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4592506 53 + 163208435 ctcctgagtagctgggattacaggcgtgagccaccatgcctggcc-agtttttg-- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5773945 53 - 180051392 ctcctgagtagctgggattacaggcatgcgccaccatgcttggcc-aatttttg-- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5959873 53 - 181584905 ctcctgagtagctgggattacaggcatgcgccaccatgcttggcc-aatttttg-- i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 990495 53 - 16193990 ctcctgagtagctgggattacaggcatgcgccaccatgcttggcc-aatttttg-- i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1811136 53 - 21434487 ctcctgagtagctgggattacaggcatgcgccaccatgcttggcc-aatttttg-- i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4773528 53 - 82825804 ctcctgagtagctgggattacaggcatgcgccaccatgcttggcc-aatttttg-- i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 279514 53 + 2521317 ctcctgagtagctgggattacaggcatgcgccaccatgcttggcc-aatttttg-- i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1761194 53 - 2415367 ctcctgagtagc-gggattacagctgtgagccaccatgcttggccaaatttttg-- i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64104845 53 + 204313951 ctccaaagtagctgggattacaggcatgaaccaccatgcctggac-aatttttg-- i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2230383 53 + 10068113 ctcccaagtagctgagattacaggcatgagccaccatgcctggcc-aatttttg-- i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 85451 53 - 709587 ctcccaagtagctgggattacaggcgtgaaccaccatgcctggcc-aatttttg-- i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1185484 54 - 2246441 ctcccaagtagctgggattacaggcatgaaccaccatgcctggcc-aatttttg-t i aotNan1.NW_018501968v1 C 0 I 273 e otoGar3.GL873522 1255325 452 + 48283576 I e canFam3.chr4 37185523 0 + 88276631 C a score=1540806.000000 s hg38.chr5_KI270795v1_alt 73197 153 + 131892 tatttttaatagagatggggtttatcatgttgaccaagctggtctcaaactcctgacttcaaatgatccaccaacctcagcctcccaa-atgctgggactgtaggcatgagccatttcgcctggctccctgaattcatattaatcttctctagc s panTro5.chr5 5323432 153 - 181907262 tatttttaacagagatggggtttatcatgttgaccaagctggtctcaaactcctgacttcaaatgatccaccaacctcagcctcccaa-atgctgggactgtaggcatgagccacttcgcctggctccgtgaattcatattaatcttctctagc i panTro5.chr5 C 0 C 0 s panPan2.chr5 5585842 153 - 183735486 tatttttaacagagatggggtttatcatgttgaccaagctggtctcaaactcctgacttcaaatgatccaccaacctcagcctcccaa-atgctgggactgtaggcatgagccacttcgcctggctccctgaattcatattaatcttctctagc i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1715721 153 + 3967317 tatttttaacagagatggggtttatcatgttgaccaagctggtctcaaactcctgacttcaaatgatccaccaacctcagcctcccaa-atgctgggactgtaggcatgagccactttgcctggctccctgaattcatattaatcttctctagc i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4592559 153 + 163208435 tatttttaatagagatggggtttaccttgttgaccaagctggtctcgaactcctgacttcaaatgatccaccaacctcagcctcccaa-atgctgagactgtaggcatgagccacttcgcctggctccctgaattcatattaatcttctctagc i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5773998 153 - 180051392 tatttttagtagagatggggtttatcatgttgaccaagctggtctcaaactcctgacttcaaatgatccaccagcctcagcctcccac-atgctgggactgtaggcatgagccacttcgcctggctccctgaattcatattaatcttctctagc i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5959926 153 - 181584905 tatttttagtagagatggggtttatcatgttgaccaagctggtctcaaactcctgacttcaaatgatccaccaacctcagcctcccac-atgctgggactgtaggcatgagccacttcgcctggctccctgaattcatattaatcttctctagc i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 990548 153 - 16193990 tatttttagtagagatggggtttatcatgttgaccaagctggtctcgaactcctgacttcaaatgatccaccaacctcagcctcctac-atgctgggactgtaggcatgagccacttcgcctggctccctgaattcatattaatcttctctagc i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1811189 153 - 21434487 tatttttagtagagatggggtttatcatgttgaccaagctggtctcgaactcctgacttcaaatgatccaccaacctcagcctcccac-atgctgggactgtaggcatgagccacttcgcctggctccctgaattcatattaatcttctctagc i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4773581 153 - 82825804 tatttttagtagagatggggtttatcatgttgaccaagctggtctcgaactcctgacttcaaatgatccaccaacctcagcctcccac-atactgggactgtaggcatgagccacttcgcctggctccctgaattcatattaatcttctctagc i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 279567 153 + 2521317 tatttttagtagagatggggtttatcatgttgaccaagctggtctcgaactcctgacttcaaatgatccaccaaccgcagcctcccac-atgctgggaccgtaggcatgagccacttcgcctggctccctgaattcatattaatcttctctagc i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1761247 152 - 2415367 tatttttagtagagatggggtttaccatgttgaccaagctggtctcgaactcctgacttcaaatgatcca-caacctcagcctcccac-atgctgggactgtaggcatgagccacttcgcctggctccctgaattcatattaatcttctctagc i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64104898 153 + 204313951 tatttttaatagagatagggtttaccatgttgacc-aactggtcttgaactcctgacttcagataatccactagcattggcctcccaaggtgctgggattacaggcatgagccactgtgcctggtcccctgaattaatattaatcttctctagc i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2230436 154 + 10068113 tatttttaatagagatagggtttaccatgttgaccaaactggtcttgaactcctgacttcagatgatccactagcctcggcctcccaaggtgctgggattacaggcatgagccactgcgcctggtcccctgaattcatattaatcttctctagc i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 85504 154 - 709587 tatttttaatagagatagggtttaccatgttgaccaagctggtcttgaactcctgacttcaaatgatccactagcctcggcctcccaaggtgctgggattacaggcatgagccactgcgcctggtcccctgaattaatattaatcttctctagc i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1185811 154 - 2246441 tatttttaatagagatagggtttaccatgctgaccaagctggtcttgaactcctgacttcagatgatccactagccttggcctcccaaggtgctgggattacaggcatgagccactgtgcctggtcccctgaattaatattaatcttctctagc i aotNan1.NW_018501968v1 I 273 C 0 e otoGar3.GL873522 1255325 452 + 48283576 I e canFam3.chr4 37185523 0 + 88276631 C a score=1482070.000000 s hg38.chr5_KI270795v1_alt 73350 136 + 131892 agcaataccacacctagcaaggaagctgcaatgggg-ctactagttgttgcacttctgg--------------------------tagtttccatggggaacagactggtgaattaaatgggactataataggaatgatca-tccatgcatcttttagatcttt s panTro5.chr5 5323585 136 - 181907262 agcaataccacacccagcaaggaagctgcaatgggg-ctactagttgttgcacttctgg--------------------------tagtttccatggggaacagactggtgaattaaatgggactataataggaatgatca-tccatgcatcttttagatcttt i panTro5.chr5 C 0 C 0 s panPan2.chr5 5585995 136 - 183735486 agcaataccacacctagcaaggaagctgcaatgggg-ctactagttgttgcacttctgg--------------------------tagtttccatggggaacagactggtgaattaaatgggactataataggaatgatca-tccatgcatcttttagatcttt i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1715874 136 + 3967317 agcaataccacacctagcaaggaagctgcaatgggg-ctactagttgttgcacttctgg--------------------------tagtttccatggggaacagactggtgaattaaatgggactataataggaatgatca-tccatgcatcttttagatcttt i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4592712 136 + 163208435 agcaataccacacctagcaaggaagctgcaattggg-ctactacttattgcacttctgg--------------------------tagtttccatggggaacagactggtgaattaaatgggactataataggaatgatca-tccatgcatcttttagatcttt i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5774151 136 - 180051392 agcaataccacacctagcaaggaagctgcaattggg-ctactacttgttgcacttctgg--------------------------tagtttccatggggaacagactggtgaattaagtgggactataataggaatgacta-tccacacatcttttagatcttt i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5960079 136 - 181584905 agcaataccacacctagcaaggaagctgcaattggg-ctactacttgttgcacttctgg--------------------------tagtttccatggggaacagactggtgaattaagtgggactataataggaatgacta-tccacacatcttttagatcttt i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 990701 136 - 16193990 agcaataccacacctagcaaggaagctgcaattggg-ctactacttgttgcacttctgg--------------------------tagtttccatggggaacagactggtgaattaagtgggactataataggaatgacta-tccacacatcttttagatcttt i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1811342 136 - 21434487 agcaataccacacctagcaaggaagctgcaattggg-ctactacttgttgcacttctgg--------------------------tagtttccatggggaacagactggtgaattaagtgggactagaataggaatgacta-tccacacatcttttagatcttt i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4773734 136 - 82825804 agcaataccacacctagcaaggaagctgcaattggg-ctactacttgttgcacttctgg--------------------------tagtttccatggggaacagactggtgaattaagtgggactataataggaatgacta-tccacacgtcttttagatcttt i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 279720 136 + 2521317 agcaataccacacctagcaaggaagctgcaattggg-ctactacttgttgcacttctgg--------------------------tagtttccatggggaacagactggtgaattaagtgggactagaataggaatgacta-tccacacatcttttagatcttt i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1761399 134 - 2415367 agcaataccacacctagcaaggaagctgcaattggg-ctactacttgttgcacttctgg--------------------------tagtttccatggggaacagactggtgaattaagtgggactataataggaatgacta-tccacaca--ttttagatcttt i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64105051 136 + 204313951 agcaataccacacctagcaaggaagctgcaattggg-ctactacatgttgcacttctgg--------------------------tagttttcatttggaacagactggtgaattaaatgggactataataggaatgacca-tccgtgcatcttttacatcttt i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2230590 132 + 10068113 agcaatattacacctagcaaggaagctgcaattggg-ctactacgtgttgcccttctgg--------------------------tagttttcaTGTGGAACGGACTggtgaattaaatgggactataataggaatgacca-----cgcatctttcacatcttt i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 85658 136 - 709587 agcaataccacacctagcaaggaagctgcaattggg-ctactacgtgttgcacttctgg--------------------------tagttttcatgtggaacagactggtgaattaaatggaactataataagaatgacca-tccatgcatcttttacatcttt i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1185965 136 - 2246441 agcaataccacacctagcaaggaagctgcaattggg-ctactacgtgctgcacttctgg--------------------------tagttttcatgtggaacagactagtgaattcaatgggactataataggaatgacca-tccacgcatcttttacatcttt i aotNan1.NW_018501968v1 C 0 C 0 s canFam3.chr4 37185523 164 + 88276631 agcaagaccacccctggcaagggggatgtacttgggactactattggttgtgtttctggcagtctacaatcctttaggatttacctggtttctatgggggccagacttgtgaattaaatggagctaggataagaattaccaccccctgcattctttagatcttt i canFam3.chr4 C 0 C 0 e otoGar3.GL873522 1255325 452 + 48283576 I a score=8050045.000000 s hg38.chr5_KI270795v1_alt 73486 750 + 131892 aagaacagcactcatct---ttgccatcc--cctgggatgtaatactgcttttt-atttgctatcttggccagaagggggagtttcagaggcttccacttggatttccccactatgatagctcttacctcacaggataa-agggcttgtgtcaattactaagtatgtcaa--------ttacagttatacatttggagaccactgagggtgggaccttggact---------gtgggtgagctggacc----taagctagaactccatttatcacctggctccCTTAGGAGGGGCCATGCTaatgctctggg--------------------------------------------------------tttcccc-ttccccagtacacagttacctgagtaacgt-tgggaagaaatggaggaatcctcgctgt--gtgcagtcatggg-gttcttcctcctggggacataggctttctgtcaatcaa--gtttccacgtccaagaacttgctcagggatggacattggggaagggatttttacttttttttaaattaaggtgactgtccttagcttcccagcc------------atccatccgt-------------gctgtttttgattatgcagatacagtagtatccttgttggctccatatctatgtggcccctaggggtgccaagttctattcactccacaggtctctgtaggTCAGGCTCCCCTGGCCTCCTC-TCTACCCTACCACTCACCACAATG---ACATCTTCCTGCCTTCTGATGGtgccatggtctgaatgttggtgtctccccaaaattcatacgttgaaacct---------------gaccaccaatgtgagggtatcaggaggt s panTro5.chr5 5323721 751 - 181907262 aagaacagcactcatct---ttgccatcc--cctgggatgtaatactgctttttaatttgccatcttggccagaagggggagtttcagaggcttccacttggatttccccactatgatagctcttacctcacaggataa-agggcttgtgtcaattactaagtatgtcaa--------ttacagttatacatttggagaccactgagggtgggaccgtggact---------gtgggtgagctggacc----taagctagaaatccatttatcacctggctccCTTAGGAGGGGCCATGCTaatgctctggg--------------------------------------------------------tttcccc-ttccccagtacacagttatctgagtaacgt-tgggaagaaatggaggaatccttgctgt--gtgcagtcatggg-gttcttccttctggggacataggctttctgtcaatcaa--gtttccacgtccaagaacttgctcagggatggacattgcggaagggatttttacttttttttaaattaaggtgactgtccttagcttcccagcc------------atccatctgt-------------gctgtttttgattatgcagatacagtagtatccttattggctccatatctatgtggcccctaggggtgccaagttctattcactccacaggtctctgtaggtcaggctcccctggcctcctc-tctaccctaccactcaccacaatg---acatcttcctgccttctgATGGtgccatggtctgaatgttggtgtctccccaaaattcatacgttgaaacct---------------gaccaccaatgtgagggtatcaggaggt i panTro5.chr5 C 0 C 0 s panPan2.chr5 5586131 751 - 183735486 aagaacagcactcatct---ttgccatcc--cctgggatgtaatactgctttttaatttgccatcttggccagaagggggagtttcagaggcttccacttggatttccccactatgatagctcttacctcacaggataa-agggcttgtgtcaattactaagtatgtcaa--------ttacagttatacatttggagaccactgagggtgggactgtggact---------gtgggtgagctggacc----taagctagaactccatttatcacctggctcccttaggaggggccatgctaatgctctggg--------------------------------------------------------tttcccc-ttccccagtacacagttatctgagtaacgt-tgggaagaaatggaggaatccttgctgt--gtgcagtcatgag-gttcttcctcctggggacataggctttctgtcaatcaa--gtttccacgtccaagaacttgctcagggatggacattgcggaagggatttttacttttttttaaattaaggtgactgtccttagcttcccagcc------------atccatccgt-------------gctgtttttgattatgcagatacagtagtatccttattggctccatatctatgtggcccctaggggtgccaagttctattcactccacaggtctctgtaggtcaggctcccctggcctcctc-tctaccctaccactcaccacaatg---acatcttcctgccttctgatggtgccatggtctgaatgttggtgtctccccaaaattcatacgttgaaacct---------------gaccaccaatgtgagggtatcaggaggt i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1716010 750 + 3967317 aagaacagcactcatct---ttgccatcc--cctgggatgtaataatgctttttaatttgccatcttggccagaagggggagtttcagaggcttccacttggatttccccactatgatagctcttacctcacaggataa-agggcttgtgtcaattactaagtatgtcaa--------ttacagttatacatttggagaccactgagggtgggaccgtggact---------gtgggtgagctggacc----taagctagaactccatttaccacctggctccCTTAGGAGGGGCCATGCTaatgctctggg--------------------------------------------------------tttcccg-ttccccagtacacagttatctgagtaacgt-tgggaagaaatggaggaatcctcgctgt--gtgcagtcatggg-gttcttcctcct-gggacataggctttctgtcaatcaa--gtttccacgtccaagaacttgctcagggatggacattgcggaagggatttttacttttttttaaattaaggtgactgtgcttagcttcccagcc------------atccatccgt-------------gctgtttttgattatgcagatacagtagtatccttattggctccatatctatgtggcccctaggggtgccaagttctattcactccacaggtctctgtaggtcaggctcccctggcctcctc-tctaccctaccactcaccacaatg---acatcttcctgccttctgATGGtgccatggtctgaatgttggtgtctccccaaaattcatacgttgaaacct---------------gaccaccaatgtgagggtatcaggaggt i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4592848 750 + 163208435 aagaacagcactcatct---ttgccatcc--cctgggatgtaatactgcttttt-atttgccatcttggccagaaggaggagtttcagaggcttccacttggatttccccactatgatagctcttacctcacaggataa-agggcttgtgtcaattactaagtatgtcaa--------ttacagttatacatttggagactactcagggtgggaccatggact---------gtgggtgaagtggacc----taagctagaactccatctatcacctggctcccttaggaggggccatgctaatgctctggg--------------------------------------------------------tttccCC-TTCCCCAGTACACAGTTATCTGAGTAACGC-Tgggaagaaatgggggaatccttgctgt--gtgcagtcgtggg-gttcttccttctggggacatgggctttctgtcaatcaa--atttccacgtccaagaacttgctcagggatggacattggggaagggatttttacttttttttaaattaaggtgactgtccttagcttcccagcc------------atccatcctt-------------gctgtttttgattatgcaggtacagtagtatccttgttggctccacatctatgtggcccctaggggtgccaagttctagtcactccacaagtctctgtaggTCAGGCTCCCCTGGCCTCCTC-TCTACCCTACCACTCACCACAGTG---ACATCTTCCTGCCTTCTGATGGtgccatggtctgaatgttggtgtctccccaaaattcatacgttgaaacct---------------gatcaccaatgtgagggtatcagaaggt i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5774287 744 - 180051392 aagaacagcactcatct---ttgccattc--cctgggatgtaatactgcttttt-atttaccatcttggccagaagggggagtttcagaggcttccacttggatttccccactatgatagctgttacctcacaggataa-agggcttgtatcagttactaagtaattggagaccacttttacatttatacatttggagaccactgagggtaggaccgtggacc---------cactgtgagctggacctaggtaggctagaactccatttatcacctggctcccttaggaggggccatgctaatgctctggg--------------------------------------------------------tttcccc-ttccccaacacacagttacctgagtagtgt-tgggaagaaatgggggaatccttgctgt--gtgcaattgtgggggttcttcctcctggggacatgggctttctgtcagtcaa--gtttccacatccaagaacttgctcagggatggacactggggaagggattgttccttttttttaaattaaggtgactgtccttagctccccag-----------------catc---------------------------ttatgcatttacagtagtgtccttgttgcctccaaatgtatgtggcccctaggggtgccaagttctattcactccacaggtctctgtaggtcaggctcccctggcctcctc-tctaccctgccactcaccacaatg---gcatcttgctgccttctgatggtgccatggtctgaatgttggtgtctccccgaaattcgtaagttgaaacct---------------aatcaccaatgtgagggtatcaggaggt i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5960215 744 - 181584905 aagaacagcactcatct---ttgccattc--cctgggatgtaatactgcttttt-atttaccatcttggccagaagggggagtttcagaggcttccacttggatttccccactatgatagctgttacctcacaggataa-agggcttgtatcagttactaagtaattggagaccacttttacatttatacatttggagaccactgagggtaggaccgtggacc---------cactgtgagctggacctaggtaggctagaactccatttatcacctggctcccttaggaggggccatgctaatgctctggg--------------------------------------------------------tttcccc-ttccccaacacacagttacctgagtagtgt-tgggaagaaatgggggaatccttgctgt--gtgcaattgtgggggttcttcctcctggggacatgggctttctgtcagtcaa--gtttccacatccaagaacttgctcagggatggacactggggaagggattgttccttttttttaaattaaggtgactgtccttagctccccag-----------------catc---------------------------ttatgcatttacagtagtgtccttgttgcctccaaatgtatgtggcccctaggggtgccaagttctattcactccacaggtctctgtaggtcaggctcccctggcctcctc-tctaccctgccactcaccacaatg---acatcttgctgccttctgATGGtgccatggtctgaatgttggtgtctccccgaaattcgtaagttgaaacct---------------aatcaccaatgtgagggtatcaggaggt i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 990837 744 - 16193990 aagaacagcactcatct---ttgccattc--cctgggatgtaatactgcttttt-atttaccatcttggccagaagggggagtttcagaggcttccacttggatttccccactatgatagctgttacctcacaggataa-agggcttgtatcagttactaagtaattggagaccacttttacatttatacatttggagaccactgagggtgggaccgtggacc---------cactgtgagctggacctaggtaggctagaactccatttatcacctggctcccttaggaggggccatgctaatgctctggg--------------------------------------------------------tttcccc-ttccccaacacacagttacctgagtagtgt-tgggaagaaatgggggaatccttgctgt--gtgcaattgtgggggttcttcctcctggggacatgggctttctgtcagtcaa--gtttccacatccaagaacttgctcagggatggacactggggaagggattgttccttttttttaaattaaggtgactgtccttagctccccag-----------------catc---------------------------ttatgcatttacagtagtgtccttgttgcctccaaatgtatgtggcccctaggggtgccaagttctattcactccacaggtctctgtaggtcaggctcccctggcctcctc-tctaccctgccactcaccacaatg---acatcttgctgccttctgatggtgccatggtctgaatgttggtgtctccccgaaattcgtaagttgaaacct---------------aatcaccaatgtgagggtatcaggaggt i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1811478 740 - 21434487 aagaacagcactcatct---ttgccattc--cctgggatgtaatactgcttttt-atttaccatcttggccagaagggggagtttcagaggcttccacttggatttccccactatgatagctgttacctcacaggataa-agggcttgtatcagttactaagtaattggagaccacttttacatttatacatttggagaccactgagggtgggaccgtggacc---------cactgtgagctggacc----taggctagaactccatttatcacctggctcccttaggaggggccatgctaatgctctggg--------------------------------------------------------tttcccc-ttccccaacacacagttacctgagtagtgt-tgggaagaaatgggggaatccttgctgt--gtgcaattgtgggggttcttcctcctggggacatgggctttctgtcagtcaa--gtttccacatccaagaacttgctcagggatggacactggggaagggattgttccttttttttaaattaaggtgactgtccttagctccccag-----------------catc---------------------------ttatgcattcacagtagtgtccttgttgcctccaaatgtatgtggcccctaggggtgccaagttctattcactccacaggtctctgtaggtcaggctcccctggcctcctc-tctaccctgccactcaccacaatg---acatcttcctgccttctgATGGtgccatggtctcaatgttggtgtctccccgaaattcataagttgaaacct---------------aatcaccaatgtgagggtatcaggaggt i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4773870 740 - 82825804 aagaacagcactcgtct---ttgccattc--cctgggatgtaatactgcttttt-atttaccatcttggccagaagggggagtttcagaggcttccacttggatttccccactgtgatagctgttacctcacaggataa-agggcttgtgtcaattactaagtaattggagaccacttttacatttatacatttggagaccactgagggtgggaccgtggacc---------cactgtgagctggacc----taggctagaactccatttatcacctggctcccttaggaggggccatgctaatgctctggg--------------------------------------------------------tttcccc-ttccccaacacacagttacctgagtaatgt-tgggaagaaatgggggaatccttgctgt--gtgcaattgtgggcgttcttcctcctggggacatgggctttctgtcagtcaa--gtttccacgtccaagaacttgctcagggatggacactggggaagggattgttccttttttttaaattaaggtgactgtccttagctccccag-----------------catc---------------------------ttatgcatttacagtagtgtgcttgttggctccaaatgtatgtggcccctaggggtgccaagttctattcactccacaggtctctgtaggtcaggctcccctggcctcctc-tctaccctgccactcaccacaatg---acatcttcctgccttctgatggtgccatggtctgaatgttggtgtctccccgaaattcatacgttgaaacct---------------aatcacaaatgtgagggtatcaggaggt i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 279856 740 + 2521317 aagaacagcactcatct---ttgccattc--cctgggatgtaatactgcttttt-atttaccatcttggccagaagggggagtttcagaggcttccacttggatttccccactatgatagctgttacctcacaggataa-agggcttgtatcagttactaagtaattggagaccacttttacatttatacatttggagaccactgagggtgggaccgtggacc---------cactgtgagctggacc----taggctagaactccatttatcacctggctcccttaggaggggccatgctaatgctctggg--------------------------------------------------------tttcccc-ttccccaacacacagttacctgagtagtgt-tgggaagaaatgggggaatccttgctgt--gtgcaattgtgggggttcttcctcctggggacatgggctttctgtcagtcaa--gtttccacatccaagaacttgctcagggatggacactggggaagggattgttccttttttttaaattaaggtgactgtccttagctccccag-----------------catc---------------------------ttatgcatttacagtagtgtccttgttgcctccaaatgtatgtggcccctaggggtgccaagttctattcactccacaggtctctgtaggtcaggctcccctggcctcctc-tctaccctgccactcaccacaatg---acatcttcctgccttctgatggtgccatggtctgaatgttggtgtctccccgaaattcataagttgaaacct---------------aatcaccaatgtgagggtatcaggaggt i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1761533 740 - 2415367 aagaacagcactcatct---ttgccatgc--cctgggatgtaatactgcttttt-atttaccatcttggccagaagggggagtttcagaggcttccacttggatttccccactgtgatagctcttacctcacaggataa-agggcttgtgtcaattactaagtaattggagaccacttttacatttatccatttggagaccactgagggtgggactgtggatc---------cactgtgagctggacc----taggctagaactccatttatcacctggctcccttaggagggaccatgctaatgctctggg--------------------------------------------------------tttcccc-ttccctaacacacagttacctgagtaatgt-tgggaagaaatgggggaatccttgctgt--gtgcaattgtgggcgttcttcctcctggggacatgggctttctgtcagtcaa--gtttccacttccaagaacttgctcagggatggacactggggaagggattgttcctttttttaaaattaaggtgactgtccttagctccccag-----------------catc---------------------------ttatgcatttacagtagtgtccttgttggctccaaatgtatgtggcccctaggggtgccaagttctattcactccacaggtctctgtaggtcaggctcccctggcctcttc-tctaccctgccactcaccacaatg---acatcttcctgtcttctgatggtgccatagtctgaatgttggtgtctccccaaaattcatacgttgaaacct---------------aatcaccaatgtgagggtatcaggaggt i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64105187 744 + 204313951 aagaacaacactcgtct---ttgccatcc--cctgggatataatactgcttttt-atttatcatcttggccagaagggacagtttaagaggcttccatttggatttccccactgtgatagctcttacctcat-ggataagggggcttgtgtcaattactaagtatgtcaa--------ttacaattatacatttagagaccactgaggatgggacggtggacc---------cactgtgagctggacg----taagctagaactccatttatcacctggttctcttagcaggggccatgctaatgctctggg--------------------------------------------------------tttcccc-ttccccagtacacagttacctgagatatgt-tgggaagaaataggggaatacttgctgt--gggcaatcatggg-gttcttcctcctggggacatgggctttctgtcaatcaa--gtttccaggtccaagaactctctta-ggatgtacactggggaagggattgtttcttttt-----attaacatgactgtccttagcttcccagcc------------atccatcctt-------------gctgttttcaattatgcagatacagtaatacccttgctggcttcacatctatgtggcccctagggatgccaagttgtattcactccacaggtctctgcaggtcaggctcccctggccttctc-tctaccctaccactcaccacaatg---acatcttcctgccttctgacagtgccatagtctctatgttagtgtctccccaaaattcataggttgaaacct---------------aatcaccaatgcgagggtattaggaggt i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2230722 745 + 10068113 aagaacagcactcatcc---ttgccatcc--tgtgggatataatactgcttttt-atttatcatcttggccagaagggacagtttcagaggctgccacttgaatctccccactgtgatagctcttacctcacaggataagggggcttgtgtcaattactaagtatgtcaa--------ttacaattatacatttggagaccaccgaggatggtacggtggacc---------cactgtgagctggacc----taggctagaactccatttatcacctggctctcttaGCAGGGGCCATGCTaatgctctggg--------------------------------------------------------ttttccc-ttccccagtacacagttacctgagtaacat-tggaaagaaacaggggaatccttgctgt--gggcaatcatggg-gttcttcctcctggggacatgggctttctgtcaatcaa--gtttccaggtccaagaactcgctta-ggatgcacactggggaagggattgtttcttttt-----attaaggtcactgtctttagcttcccagac------------atccatgctt-------------gctgttttcgattatgcagatacagtagtacccttgctggctgcacatctatgtggcccctagggatgccaagttgtattcactccacaggtctctgcaggtcaggctcccctggccttctc-tctaccctaccactcaccacaatg---acatcttcctgccttctgatagtgccatagtctctacgttggtgtctccccaaaattcataggttgaaacct---------------aatcaccaatgtgagggtattaggaggt i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 85794 733 - 709587 aagaacagcactcatct---ttgccatcc--cctgggatataatactgcttttt-atttatcatcttggccagaagggacagtttcagaggcttccacttggatctccccactatgatagctcttacctcacagcataagggggcttgtgtcaattactaagtatgtcaa--------ttacaattatacattcggagaccactgaggatggtacggtggacc---------cactgtgagctggacc----taggctagaactccatttatcacctggctctcttagcaggcgccatgctaatgctctagg--------------------------------------------------------ttttccc-ttccccagtacacagttacctgagtaacat-tgggaagaaataggggaatccttgctgt--gggcagtcatggg-gttcttcctcctggggacctgggctttctgtcagtcaa--gtttccaggtccaagaactcactta-ggatgtacactggggaagggattgtttcttttt-----attaaggtgactgtccttagcttcccagcc------------atccatcctt-------------gctgttttcgattatgcagatacagtagtaccttggctggctgcacatctatgtggcccctagggatgccaagttgtattca------------ctgcagctcaggctcccccagccttctc-tctaccctaccactcaccacaatg---acatcttcctgccttctgAAAGtgccatagtctctgtgttggtgtctccccaaaattcataggttgaaacct---------------aatcaccaatgtgagggtattaggaggt i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1186101 745 - 2246441 gagaacagcactcatct---ttgccatcc--cctgggatataatactgcttttt-atttatcatcttggccagaagggacagtttcagaggcttccacttggatttccccactataatagctcttacctcacaggataagggggcttgtgtcaattactaagtatgtcaa--------ttacaattatacatttggagaccactgagggtgggatggtggacc---------cactgtgagctggacc----taggctagaactccatttatcacctggccctcttagcaggggccatgctaatgctctggg--------------------------------------------------------tttcccc-ttccccagtacacagttacctgagtaatgt-tgggaagaaataggggaatccttgctgt--gggcaatcatgag-gttcttcctcctggggacatgggctttctgtcaatcaa--gtttccaggtccaagaactcgctta-ggatgtacactgggggagggattgtttcttttt-----attaaggtgactgtccttagcttcccagcc------------attcatcctt-------------gctgttttcgattatgcagatacagcagtacccttgctggctgcacatctatgtggcccctagggatgccaagttgtattcactccacaggtctctgcatgtcaggctcccctggccttctc-ttcaccctaccactcaccacaatg---acatcttcctgccttctgATGGtgccatagtctctatgttggtgtctccccaaaattcatgggttgaaatct---------------aatcaccaatgtgagggtattaggaggt i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1255777 755 + 48283576 aaaaaTAATAAtaatct---ttgcaatcc--cctgggatgtaatactgtttttg-atttgctatcttagccagaaggagccatttcagaagcttacatttggcctt-cccattatgaatactctgacttcac-------------------ccattactaagtatgtcaa--------ttccaagtgtatatttagacaccattgtg--tgagactgtggacccagtacactcactgtgagctggacc----tgggctagaactccatttaccccctaactcccatagtaggggccatgatcatgcactggg--------------------------------------------------------tttcccctttccccagtatacagttacctgagtaactcaggggaaggactttagcaatcatagcagtcattgttgttatggg-ctcctttcttctggggacatgggtttttcttcaaccaatcagttccaggtccaagagcccactcagatgtggacactgggaaagaaattgttacttttt-----attaggatgactatctttagcctcctgatc------------atccatcctc------------aaatattttggattacacagatagagtagtgtccttgttggctacacatctgtgtggtct----ggatgccatgttctattaacttctcaagtctctgcaggtcaggcttaaatggccaccccttctgccttaccactcagcacaataattatattttcctcccttctcagggtgctgtaatctgaatgcttctgtcttccccaaattcataccttgaaaccccaaatttctaccttgaaactacaatgtgactgtgttaggaggt i otoGar3.GL873522 I 452 C 0 s canFam3.chr4 37185687 806 + 88276631 gagagtagcactaagagagagtaccattcctccctggatatgatactagttttg-atttactatcttacccacaaggggcagtttcagaggcattcacttgttcttccccaccttgacagctcttacctcacagaataagggaggttgtgctggttactaggtctgtgta--------tt---ttgagacatttggagaccactgggtgggatgcagtggacc---------tgctgtgaccagggtc----tgggctagaactccatttatcacttggcccccttaacagggaccatgttgatgctttgagtttccaggtagcaaagtgatcttccattctctatctgtcctagaaatggttgagtatttccct-ttccacagtattcagttacctgagtaacgtgaggaaaggactggggaaatcattgctgt--gtattattgcagc-atctttcctcctggggacatgggctttccttcaaccaatggctttcaggtcgta-aacctgcccaggtatgaa-acgggggaagggattgttacttctt-----attggggtgactatctttagttacctatcctaaacttcaggaattcaccttcagactatcctagattttttttttattatgtagatggagtagtaccctggttggctgcccatctatgttgctcctagggatgccatgttctagtaactctctgaccctctgcagcttgggctctcttgcctgtccc-tccaccttaccactcatgaaattg---g-atcttcctgcattccctc--tgcca------------tggtgtctcccatgttttcaggtctc----cat---------------tatccccactg-----gtatgagtgggt i canFam3.chr4 C 0 I 97 a score=4069825.000000 s hg38.chr5_KI270795v1_alt 74236 396 + 131892 ggggcctttggaaggcgattgggtcatgaaggtgga-gcctcatgaatgggactagtg-ccctaatgaaaagatgtcccagcatgctgccctgcctgttctacactctgaggacacagtgagaaggcaccatctatgagccagaaagtgggccttcagcagacaccaaatctactttga--------------------------------------------------------------------------tcttggactt---------------------cccggcctccagaactgttagaaatgaatttc-----tttataagccacccagcctatggcattttgttacagcagc--------ACTAAGGTAGATGGCTTCTAGTTTTCCAAGGTCCTTGGGATCATTTCTG---TGAGTAAGCCTGGTTGTA-----CAGTGGCAATTCCTCCTGCCAGCCCTGGTCCCCAGAGAGGAGCCATCACTGAATTTCTAAGTGATCcatt s panTro5.chr5 5324472 396 - 181907262 ggggcctttggaaggcgattgggtcatgaaggtgaa-gcctcatgaatgggactagtg-ccctaatgaaaagatgtcccagcatgctgccctgcctgttctacactctgaggacacagtgagaaggcaccatctatgagccagaaagtgggccttcggcagacaccaaatctactttga--------------------------------------------------------------------------tcttggactt---------------------cccagcctccagaactgttagaaataaatttc-----tttataagccacccagcctatggcattttgttacagcagc--------ACTAAGGTAGATGGCTTCTAGTTTTCCAAGGTCCTTGGGATCATTTCTG---TGAGTAAGCCTGGTTGTA-----CAGTGGCAATTCCTCCTGCCAGCCCTGGTCCCCAGAGAGGAGCCATCACTGAATTTCTAAGTGATCcatt i panTro5.chr5 C 0 C 0 s panPan2.chr5 5586882 396 - 183735486 ggggcctttggaaggcgattgggtcatgaaggtgga-gcctcatgaatgggactagtg-ccctaatgaaaagatgtcccagcatgctgccctgcctgttctacactctgaggacacagtgagaaggcaccatctataagccagaaagtgggccttcagcagacaccaaatctactttga--------------------------------------------------------------------------tcttggactt---------------------cccggcctccagaactgttagaaataaatttc-----tttataagccacccagcctatggcattttgttacagcagc--------actaaggtagaTGGCTTCTAGTTTTCCAAGGTCCTTGGGATCATTTCTG---TGAGTAAGCCTGGTTGTA-----CAGTGGCAATTCCTCCTGCCAGCTCTGGTCCCCAGAGAGGAGCCATCACTGAATTTCTAAGTGATCcatt i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1716760 395 + 3967317 gggg-ctttggaaggcgattgggtcatgaaggtgga-gcctcatgaatgggactagtg-ccctaatgaaaagatgtcccagcatgctgccctgcctgttctacactctgaggacacagtgagaaggcaccatctataagccagaaagtgggccttcagcagacaccaaatctactttga--------------------------------------------------------------------------tcttggactt---------------------cctggcctccagaacggttagaaataaatttc-----tttataagccacccagcctatggcattttgttacagcagc--------ACTAAGGTAGATGGCTTCTAGTTTTCCAAGGTCCTTGGGCTCATTTCTG---TGAGTAAGCCTGGTTGTA-----CAGTGGCAATTCCTCCTGCCAGCCCTGGTCCCCGGAGAGGAGCCATCACTGAATTTCTAAGTGATCcatt i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4593598 396 + 163208435 ggggcctttggaaggcgattgggtcatgaaggtgga-gcctcatgaatgggactagta-ccctaatgaaaagatgtcccagcatgctgccctgcctgttctactctctgaggacacagtgagaaggcaccatctatgagccagaaagtgggccttcagcagacaccaaatctactttga--------------------------------------------------------------------------tcttggactt---------------------cccagcctccagaactgttagaaataaatttc-----tttataagccacccagcctatggcattttgttacagcagc--------actaaggcaGATGGCTTCTAGTTTTCCAAGGTCCTTGGGATCATTTCTG---TGAGTCAGCCTGGTTCTA-----CAGTGGCAACTCCTCCTGCCAGCCCTGGTCTCCAGAGAGGAGCCATCACTGAATTTCTAAGTGATCcatt i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5775031 386 - 180051392 gaggcctttgggaggcgattgggtcatgaaggtgga-gcctcttgaatgggactagtgcccctaatgaaaagatgtcccagcatgctgccttgcctgtttgactctctgaggacacagtgagaaggcaccgtctgtgagccagaaagtgggccctcagcagacaccaaatctactttga--------------------------------------------------------------------------tcttggactt---------------------cccagccttcagaactgttagaaataaatttc-----tttataagccacccagcctacggcattttgttacagcagc--------actaaggcagatggcttctagttttccaaggtccttgggatcatttctg---tgagtaagcctggttcta-----caatggcaactcctcctgccagccctggtcC-----------CCATCACTGAATTTCTAAGGAATCcatt i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5960959 386 - 181584905 gaggcctttgggaggcgattgggtcatgaaggtgga-gcctcttgaatgggactagtgcccctaatgaaaagatgtcccagcatgctgccttgcctgtttgactctctgaggacacagtgagaaggcaccgtctgtgagccagaaagtgggccctcagcagacaccaaatctactttga--------------------------------------------------------------------------tcttggactt---------------------cccagccttcagaactgttagaaataaatttc-----tttataagccacccagcctacggcattttgttacagcagc--------ACTAAGGCAGATGGCTTCTAGTTTTCCAAGGTCCTTGGGATCATTTCTG---TGAGTAAGCCTGGTTCTA-----CAATGGCAACTTCTCCTGCCAGCCCTGGTCC-----------CCATCACTGAATTTCTAAGGAATCcatt i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 991581 386 - 16193990 gaggcctttgggaggcgattgggtcatgaaggtgga-gcctcttgaatgggactagtgcccctaatgaaaagatgtcccagcatgctgccttgcctgtttgactctctgaggacacagtgagaaggcaccgtctgtgagccagaaagtgggccctcagcagacaccaaatctactttga--------------------------------------------------------------------------tcttggactt---------------------cccagccttcagaactgttagaaataaatttc-----tttataagccacccagcctacggcattttgttacagcagc--------actaaggcagatggcttctagttttccaaggtccttgggatcatttctg---tgagtaagcctggttcta-----caatggcaactcctcctgccagccctggtcC-----------CCATCACTGAATTTCTAAGGAATCcatt i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1812218 386 - 21434487 gaggcctttgggaggcgattgggtcatgaaggtgga-gcctcttgaatgggactagtgcccctaatgaaaagatgtcccagcatgctgccttgcctgtttgactctctgaggatacagtgagaaggcaccgtctgtgagccagaaagtgggccctcagcagacaccaaatctactttga--------------------------------------------------------------------------tcgtggactt---------------------cccagccttcagaactgttagaaataaatttc-----tttataagccacccagcctacggcattttgttacagcagc--------cctaaggcagaTGGCTTCTAGTTTTCCAAGGTCCTTGGGATCATTTCTG---TGAGTAAGCCTGGTTCTA-----CAATGGCAACTCCTCCTGCCAGCCCTGGTCC-----------CCATCACTGAATTTCTAAGGAATCCTtt i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4774610 385 - 82825804 ggggcctttgggaggcgactgggtcatgaaggtgga-gcctcttgaatgggactagtg-ccctaatgaaaagatgtcccagcatgctgccttgcctgttctactctctgaggacacagtgagaaggcactatctgtgagccagaaagtgggccctcagcagacaccaaatctactttga--------------------------------------------------------------------------tcttgaactt---------------------cccagccttcagaactgttagaaataaatttc-----tttataagccacccagcctacggcattttgttacagcagc--------actaaggcagatggcttctagttttccaaggtccttgggatcatttctg---tgagtaagcctggttcta-----caatggcaactcctcctgccagccctggtcc-----------ccatcactgaatttctaaggaatccatt i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 280596 386 + 2521317 gaggcctttgggaggcgattgggtcatgaaggtgga-gcctcttgaatgggactagtgcccctaatgaaaagatgtcccagcatgctgccttgcctgtttgactctctgaggacacagtgagaaggcaccgtctgtgagccacaaagtgggccctcagcagacaccaaatctactttga--------------------------------------------------------------------------tcttggactt---------------------cccagccttcagaactgttagaaataaatttc-----tttataagccacccagcctatggcattttgttacagcagc--------actaaggcagatggcttctagttttccaaggtccttgggatcatttctg---tgagtaagcctggttcta-----caatggcaactcctcctgccagccctggtcC-----------CCATCACTGAATTTCTAAGGAATCcatt i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1762273 385 - 2415367 ggggcctttggaaggcgattgggtcatgaaggtgga-gcctcttgaatgggactagtg-ccctaatgaaaagatgacccagcatgctgccttgcctcttctactctctgaggacacagtgagaaggcactatctgtgagccagaaagtgggccctcagcagacaccaaatctactttga--------------------------------------------------------------------------tcttggactt---------------------cccagcctccagaactgttagaaataaatttc-----tttataagccacctagcctatggcattttgttacggcagc--------actaaggcagatggcttctagttttccaaggtccttgggatcatttctg---tgagtaagcctggttcta-----caatggcaactcctcctgccagccctggtcC-----------CCATCACTGAATTTCTAAGTAATCcatt i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64105931 396 + 204313951 aggggctttggaaggtgattgggtcataagggtgga-gcctcatgaatggggctagca-ccctaatgaaaagatgcccgagtatgcttccctgcctgttctactctctgaggacatggtaagaaggtgccatctaggagcccgaaagtgggccctcagcggacaccaaacctactttga--------------------------------------------------------------------------tcttggactt---------------------cccagcctccagaactgttagaaataaattcc-----tttataagccacccagcctatgatattttgtgacagcagc--------actaaggcagatggcttctggttttccaaggtccttgggataattgctg---tgagtgagtctggctcta-----ccatggcaactcctcctgccagccctggtccccagagaggagccgtcactgaacttctaagtggtgcatt i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2231467 396 + 10068113 gggggctttggaaggcgattgggtcataagggtgga-gcctcatgaatgggactcgtg-ccctaatgaaaagatgccccagcatgctgccctgcctgttctgctctctgaggacatggtgagaaggtaccatctaggagccagaaactgggccctccgcagacaccaaacttactttga--------------------------------------------------------------------------tcttggactt---------------------cccagcctccagagctgttagaaataaattcc-----tttataagccacccagcctataatattttgtgacagcagc--------actaaggcagatggcttctggttttccaaggtccttgggataattgctg---tgagtgagcctggctcta-----ccctggcaactcctcctgccagccctggtccccagagaggagccatcactgaacttctaagtggtgcgtt i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 86527 396 - 709587 gggggctttggaaggcgattgggtcataagggtgga-gcctcatgaatgggactagtg-ccctaatgaaaagatgccccagcgtgctgccctgcctgttctactctctgaggacatggtgagaaggagccatctaggagccagaaagggagccctcagcagacaccaaacctactttga--------------------------------------------------------------------------tcttggactt---------------------cccagcctccagaactgttagaaataaattcc-----tttataagccacccagcctatgatattttgtgacagaagc--------ACTAAAGCAGATGGCTTCTGGTTTTCCAAGATCCTTGGGATAGttgctg---tgagtgagcctggcttta-----ccatggcaattactcctgccagccctggtccccagacaggagccatcactgaacttctaagtggtgcatt i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1186846 491 - 2246441 gggggctttggaaggcgattgggtcataagggtgga-gcctcacgaatgggactagtg-ccctaatgaaaagatgccccagcgtgctgccctgcctgttctactctctcaggacatggtgagaaggtaccatctaggagccagaaagtgggccctcagcagacaccaaacctacTTTGAATGGCTGGGAAGCTAAGGACAGTCACCTTAATAAAAAGAAACAATCCCTCCCCCAGTGTACATCCTAAGCGAGTTCTTGGACCTGGAAACTTGATTGACAGAAAGcccagcctacagaactgttagaaataaattcc-----gttttaagccacccagcctatgatatgttgtgacagcagc--------actaaggcaGATGGTTTCTGGTTTTCCAAGGTCCTTGGGATAattgctg---tgagtgagcttggctcta-----ccatgtcaactccttctgccagccctggtccccagagaggagccatcactgaacttctaagtggtgcatt i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1256532 384 + 48283576 gggacctttggaagatgattagatcatgagggtaaaggccctgtgaatggga----tg----------gaagatgctctagagagctgcct---ctgt--------------acagagtgagaaggtgctttctataagccagaaaactggccctcagcagacaccaaat-tacctgga--------------------------------------------------------------------------tcttgacctt---------------------cccagccttcagacctctggtaaataagtttctgttgtttgtgagccacccag-ctatggcgttttgttatagcagcctggatggactaaggcaggtggcttcta-ttgtccagggtcc-tgtcatccctcctgctctgagtgagactggttgtattaatcaatgacatctccccctgccagcccaagcccctaaggaaaagccatccctgaacttctaagtggtgtgtt i otoGar3.GL873522 C 0 C 0 e canFam3.chr4 37186493 97 + 88276631 I a score=5503172.000000 s hg38.chr5_KI270795v1_alt 74632 511 + 131892 cctaacagccttgg----taagtggg-ttatcatctgggtcctgtgtgcagcacaggcctct-----------gggagt-tccagccttacatggc-----acacctcctctggtgggcccac-ctctctgagcctaagtgccaagggcct------accgtctgctccagcagttctcacttcatgctggccgctgctttttcccatgtttctaggaatcat--ctgcagtgagtttgcaccatctcctgggacactggtgagagtattaaatcctgtatcctgggagagttctcccaagttgataaatactccc-ttatctaaccttaccttctga--cctccttgaccagacacccttggattccagtccca--tgttcctgcagacctgtgctgggtaggtcctacagctcctttggggtatag-ccccatctttcctcaccaggctcaacatgcccacagctggttgctgttgtgacttcatcctagtcattggcctaatgaccaggaggacagacaaggcagagcctgagccggggacgtgt s panTro5.chr5 5324868 511 - 181907262 cctaacagccttgg----taagtggg-ttatcatctgggtcctgtgtgcagcacaggcctct-----------gggagt-tccagccttacatggc-----acacctcctctggtgggcccac-ctctctgagcctaagtgccaagggcct------accgtctgctccagcagttctcacttcatgttggccgctgctttttcccatgtttctaggaaccat--ctgtagtgagtttgcaccatctcctgggacactggtgagagtattaaatcctgtatcctgggagagttctcccaagttgataaatactccc-ttatctaaccttaccttctta--cctccttgaccagacacccttagattccagtccca--tgttcctgcagacctgtgctgggtaggtcctacagctcctttggggtatag-ccccatctttcctcaccaggctcaacatgcccacagctggttgctgttgtgacttcatcctagtcattggcctaatgaccaggaggacagacgaggcagagcctgagccggggacgtgt i panTro5.chr5 C 0 C 0 s panPan2.chr5 5587278 511 - 183735486 cctaacagcattgg----taagtggg-ttatcatctgggtcctgtgtgcagcataggcctct-----------gggagt-tccagccttacatggc-----acacctcctctggtgggcccac-ctctctgagcctgagtgccaagggcct------accgtctgctccagcagttctcacttcatgttggccgctgctttttcccatgtttctaggaaccat--ctgtagtgagtttgtaccatctcctgggacactggtgagagtattaaatcctgtatcctgggagagttctcccaagttgataaatactccc-ttatctaaccttaccttctga--cctccttgaccagacacccttagattccagtccca--tgttcctgcagacctgtgctgggtaggtcctacagctcctttggggtatag-ccccatctttcctcaccaggctcaacatgcccacagctggttgctgttgtgacttcatcctagtcattggcctaatgaccaggaggacagacgaggcagagcctgagccggggacgtgt i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1717155 508 + 3967317 cctaacagccttgg----taagtggg-ttatcatctgggtcccatgtgcagcataggcctct-----------gggagt-tccagccttacatggc-----acacctcctctggtgggcccac-ctctctgagcctaagtgccaagggcct------accgtctgctccagcagttctcacttcatgctggccgctgctttttcccatgtttctaggaaccat--ctgtagtgagtttgcaccatctcctgggacactggtgagagtattaaatcctgtatcctgggagagttctcccaagttgataaatactccc-ttatctaaccttactgtctga--cctccttgaccagacacccttggattccagtccca--tgttcctgcagacctgtgctgcgtaggtcctacagctcctttggggtatag-ccccatctttcctcaccaggctcaacatgcccacagctggttgctgttgtgacttcatcctagtcattggcctaatgaccaggaggacagacgaggcagagcctgagccggggacg--- i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4593994 511 + 163208435 cctaacagccttgg----gaagtggg-ttatcatctgggtcctgtgtgcagcataggcctct-----------gggagt-tccagccttacatggc-----acacctcctctggtgagcccac-ctctctgagtctaagtgccaagggcct------accgtctgcttcggcatttctcacttcatgttggccgctgctttttcccatgtttctgggaaccat--ctgtagtgagtttgcaccatctcctgggacactggtgagagtattaaatcctgtatcctgggagagttctcccaagttgataaatactccc-ttatccaaccttaccttctga--cctccttgaccaggcactctgggattccagtccta--tgttcctgcagacctgtgctggctaggtcctacagctcctttggggtatag-ccccatccttcctcaccaggctcaatatgcccacagccggttgccgttgtgacttcatcctagtcattggcctaatgaccaggaggacagacgaggcagagcctgagccggggatgtgt i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5775417 503 - 180051392 cctatcagtcttgg----gaagtggg-atatcatccgggtcctgcgtgcagcataggcctat-----------gggagt-tccagccttacgtggt-----acacttcctctggtgggcgcac-ctctctgggcctcagtgccaagggcct------actgtctgctctggcatttctcacttcatgttggccactgc-ttttcccatgtttctaggaaccat--ctgtagtgagtttgtaccttctcctgggacgctggtgagagtattaaatcctgtattctgggagggttctcccaagttgataaatactc-------ccaaccttaccttctga--tcttcttgaccagagacccttggattccggtccca--tgttcctgcagacctgtgctggttaggtcctacagctcctttggggtatag-ccccatctttcctcaccaggctcaacgtgcccacagccgg-tgccgttgtgacttcatcctagtcgttggcctaatgaccaggaggacagatgaggcagagcttgagctggggacatgt i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5961345 509 - 181584905 cctatcagtcttgg----gaagtggg-atatcatccgggtcctgcatgcagcataggcctat-----------gggagt-tccagccttacgtggt-----acacttcctctggtgggcccac-ctctctgggcctcagtgccaagggcct------accgtctgctctggcatttctcacttcatgttggccactgc-ttttcccatgtttctaggaaccat--ctgtagtgagtttgtaccttctcctgggatgctggtgagagtattaaatcctgtattctgggagggttctcccaagttgataaatactccc-ttatccaaccttaccttctga--tcttcttgaccagagacccttggattccggtccca--tgttcctgcagacctgtgctggttaggtcctacagctcctttggggtatag-ccccatctttcctcaccaggctcaacgtgcccacagccgg-tgccgttgtgacttcatcctagtcgttggcctaatgaccaggaggacagatgaggcagagcttgagctggggacatgt i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 991967 509 - 16193990 cctatcagtcttgg----gaagtggg-atatcatccgggtcctgcgtgcagcataggcctat-----------gggagt-tccagccttacgtggt-----acacttcctctggtgggcccac-ctctctgggcctcagtgccaagggcct------accgtctgctctggcatttctcacttcatgttggccactgc-ttttcccatgtttctaggaaccat--ctgtagtgagtttgtaccttctcctgggacgctggtgagagtattaaatcctgtattctgggagggttctcccaagttgataaatactccc-ttatccaaccttaccttctga--tcttcttgaccagagacccttggattccggtccca--tgttcctgcagacctgtgctggttaggtcctacagctcctttggggtatag-ccccatctttcctcaccaggctcaacgtgcccacagccgg-tgccgttgtgacttcatcctagtcgttggcctaatgaccaggaggacagatgaggcagagcttgagctggggacatgt i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1812604 509 - 21434487 cctaacagtcttgg----gaagtggg-atatcatccgggtcctgcgtgcagcataggcctat-----------gggagt-tccagccttacgtggt-----acacctcctctggtgggcccac-ctctctgggcctcagtgccaagggcct------accatctgctctggcatttctcacttcatgttggccactgc-ttttcccatgtttctaggaaccat--ctgtagtgagtttgtaccatctcctgggacgctggtgagagtgttaaatcctgtattctgggagggttctcccaagttgataaatactccc-ttatccaaccttaccgtctga--tcttcttgaccagagacccttggattccggtccca--tgttcctgcagacctgtgctggttaggtcctacagctcctttggggtatag-ccccatctttcctcaccaggctcaacgtgcccacagccgg-tgccgttgtgacttcatcctagtcgttggcctaatgaccaggaggacagacgaggcagagcttgagctggggacatgt i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4774995 509 - 82825804 cctaacagccttgg----gaattggg-atatcatctgggtcctgcgtgcagcataggcctat-----------gggagt-tccagccttacgtggt-----ccacctcctctggtgggcccac-ctctctgggcctcagtgccaagggcct------accgtctgctctggcatttctcacttcatgttggccactgc-ttttcccatgtttctaggaaccat--ctgtagtgagtttataccatctcctggaacgctggtgagagtattaaatcctgtattctgggagggttctcccaagttgataaatactccc-ttatccaaccttaccttctga--tcttcttgaccagagacccttggattccggtccca--tgttcctgcagacctgtgctggttaggtcctacagctcctttggggtatag-ccccatctttcctcaccaggcccaacgtgcccacagctgg-tgccgttgtgacttcatcctagtcgttggcctaatgaccaggaggacagacgaggcagagcttgggccgggaacatgt i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 280982 507 + 2521317 cctaacagtcttgg----gaagtggg-atatcatccgggtcctgcgtgcagcataggcctat-----------gggagt-tccagccttacgtggt-----acacctcctctggtgggcccac-ctctctgggcctcagtgccaagggcct------accatctgctctggcatttctcacttcatgttggccactgc-ttttcccatgtttctaggaaccat--ctgtagtgagtttgtaccatctcctgggacgctggtgagagtattaaatcctgtattctgggagggttctcccaagttgataaatactccc-ttatccaaccttaccgtctga--tcttcttgaccagagacccttggattccggtccca--tgttcctgcagacctgtgctggttaggtcctacagctcctttggggtatag-ccccatctttcctcaccaggctcaacgtgcccacagccgg-tgccgttgtgacttcatc--ggtcgttggcctaatgaccaggaggacagacgaggcagagcttgagctggggacatgt i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1762658 510 - 2415367 cctaacagccttgg----gaagtggg-atatcatctgggtcctgcatgcagcataggcctat-----------gggagt-tccagccttacatggt-----acacctcctctggtgggcccac-ctctctgggcctaagtgccaagggcct------accatctgctctggcatttctcacttcatgttggccactgctttttctcatgtttctaggaaccat--ctgtagtgagtttataccatctcctgggacactggtgagagtactaaatcctgtattctgggagagttctcccaagttgataaatactccc-ttatccaacctttccgtctga--tcttcttgaccagatacccttggattccggtccca--tgttcctgcagacctgtgctggttaggtcctacagctcctttggggtatag-cctcatctttcctcaccagactcaacatgcccacagccgg-tgctgttgtgacttcatcctagtcgttggccgaatgaccaggaggacagacgaggcagagcttgagccggggacatat i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64106327 514 + 204313951 cctaacagccttgggttgggggtggg-atgtcatctgggtcttgtgtacagcataggcctct-----------gggagt-tccagccttacatggc-----acatctcctctggtgggtccac-ctgtctgggcct-----ccaagtgccttttctcaccatcttccctgtcatttctcacttcatgttggttgctgc-ttttcccatgtttctaggaaccat--ctgtagtgagtttgcaccatctcctgggccactggtgagagtactaaatcctgtatcctgggagagttctcccaagttgataaatgctcct-ttatccaatcttaccttctga---cttcttgagcagacacccttggattccagtccca--tgttcccacaggcctgtgctggccaggtcctcccgctcctttgggatatag-cctcatctttcctcatcagacccaacatgcccacagcaggttgctattgtgacttcatcctagtcattgtcctagtgatcgggaggacagatgaggcagagcctgagccagggacgtgt i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2231863 515 + 10068113 cctaacagccttgggtcaggggtggg-atgtcatctgggtcctgtgtacagcataggcctct-----------gggagt-tccagtcttacatggc-----acacctcctctggtgggtccac-caatctgggcct-----ccaagtgccttttctcactgtctgccctgtcatttctcacttcatgttggttgctgc-ttttcccatgtttctaggaaccat--ctgtagtgagtttgcaccatctcctgggccactggtgagagtaataaatcctgtaccccgggagagttctcccaagttgataaacactcct-ttatccaatcttaccttctga--ccttcttgagcagacacccttggattccagtccta--tgttcccacagacctgtgctggctaggtcctcccgcccctttgggatatag-cctcttctttccttatcaggccccacatgcccacagcaggttgctattgtgacttcatcctagtcattgtcctagtgatcgggaggacagatgaggcagagcctgagccagggacgtgt i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 86923 516 - 709587 cctaacagccttgggtcaggggtgggaatgtcatctgggtcctatgtacagcatagggctct-----------gggagt-tccagccttacatggc-----acacctcctctggtgggtccac-ctgtctgggcct-----ccgagtgccttttctcaccgtttgccctgtcatttctcacttcatgttggttgctgc-ttttcccatgtttctaggaaccat--ttgtagtgagtttgcaccatctcctgggccactggtgagggtaataaatcctgtatcctgggagagttctcccaagttgataaatgctcct-ttatccaatcttaccttctga--gcttcttgagcagacacccttggattccagtccca--tgttcccacaggcctgtgctgtctaggtcctcccgctcctttgggatatcg-cctcatctttcctcatcaggcccaacatgcccacagtgggttgctattgtgacttcgtcctagtcattgtcctagtgatcgggaggacagatgaggcagagcctgagccagggacgtgt i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1187337 517 - 2246441 cctaacagccttgggtcgggggtggg-atgtcatctgggtcctgtgtacagcataggcctct-----------gggagt-tccagccttacatggc-----acacctcctctggtgggtccac-ctgtctgggcct-----ccaagtgccttttctcaccgtctgtcctgtcatttctcacttcatgtttgttgctgc-ttttcccatgtttctaggaaccat--ctgtagtgagtttgcaccatctcctgggccactggtgagagtaataaatcctgtatcctgggagagttctcccaagttgataaatgctcct-ttatccaatcttaccttctgaccccttcttgagcaggcacccttggattccagtccca--tgttcccacagacctgtgctggccaggtcctcccactcctttgggatatag-cctcatctttcctcatcaggcccaacatgcccacagcgggttgctattgtgacttcatcctagttattgtcctagtgatcgggaggacagatgaggcagagcctgagccagggacgtgt i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1256916 481 + 48283576 ccta-cagcctcag----ggaatggt-gtgtcatct-ggtcctgtgtgcagcctaggcctct-----------gagggtctccagccttacccagt-----gcgtctcctctggtgtgtccactttctgtgtatttcaatctctttgtccc-------ccatctgctgtggcaattctccacttacatgggactttgc--tattctgtgcttctaggaaccat--tt--------------ctatttcctgggacacatgcaagggtatcaaatcctgtatcctaggacagtgcccccaagttgataaacac-cct-ctatccaaccatatgttctgg--ccctcttgtccagatacccttggaatctagttccaattactgctgctaa--tgtgttgattaggt---------cctttggaatacag-cctcatttttctttatcaggcccaacaagcccacagccagtttatgttgtgacttaa-cctagtcagtggcctaatggccacatggagaaat-aggcagatcctgagcaggagacatg- i otoGar3.GL873522 C 0 C 0 s canFam3.chr4 37186590 514 + 88276631 cctgacagtcttg-----caggtggt-atgtcttctgggtcttatgtgcaacataagcttctggttggaggcggggggt-tctgaccttacatagtataggacgacccctccgccaggcctgc-ttctctgagcct-----ttcaatccct-tcttcaacatctgctgtggcacttctcactacacgtgggccactga-tttctccatgcttctggagactgttgcaggagtgaatttgtataa-ctccaagggcacttgggagggtgttaaatcttgtgttctgggtgggtgctgccatactgataaacgctccctttgtctggatttatgctctgg--ctctgttgaccattcaccct------------cca--tcccaatccagtcctgtgttgactaagtactgcagccactttgggggatagcccccatctttccacatggggcccaatgtgtccacagctagtttatgttatgatttaaccctagttattggcccaatgg-catcaggagaagtggggcagatcttgag-TGTGGTCGTGT i canFam3.chr4 I 97 N 0 a score=1772571.000000 s hg38.chr5_KI270795v1_alt 75143 181 + 131892 tgtctggctggggagaggcctctgcacagtgtccaggcaaggagggagggagtgccagcccttagcggcaggggc-ggcattcctgccagctcagagggctcagtggggatatagagagtccatcgtttgtagagacctcaacctaaatgttccca-gcctgtgtgtcagagttgtactctct-- s panTro5.chr5 5325379 175 - 181907262 tgtctggctggggagaggcctctgcacagtgtccaggcaaggagggagggagtgccagcccttagcggcaggggt-ggcattcctgccagctcagagggctcagtggggatatagagagtccatcgtttgtagagacctcaacctaaatgttccca-gcctgtgtgtcagggttgta-------- i panTro5.chr5 C 0 C 0 s panPan2.chr5 5587789 182 - 183735486 tgtctggctggggagaggcctctgcacagtgtccaggcaaggagggagggagtgccagcccttagcggcaggggt-ggcattcctgccagctcagagggctcagtggggatatagagagtccatcgtttgtagagacctcaacctaaatgttcccacgcctgtgtgtcagggttgtactctct-- i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01015413v1 1717663 180 + 3967317 tggctggctggggagaggcctctgcacagtgtccaggcaaggagggagggagtgccagcccttagcggcagggg--ggcattcctgccagctcagagggctcagtggggatatagagagtccatcgtttgtagagacctcaacctaaatgttccca-gcctgtgtgtcagggttgtactctct-- i gorGor5.CYUI01015413v1 C 0 C 0 s nomLeu3.chr2 4594505 180 + 163208435 tgtctggctggggagaggcctctgcacagtgtccaggcaaggagggagggagtgccagctcttagcggcaggggt-ggcattcctgcaggctcagagggctcag-ggggatatagagagtccatcatttgtagagacctcaacctagatgtcccta-gcctgtgtgtcagggtTGTACTCTCT-- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 5775920 177 - 180051392 tgtctggctgaggagaggcctctgcacagtgtccaggcaaggagggagggagttccagcccttagcaacagggt--gacattcctgccggctcagagggctcag-ggggatatagagagtccatcatttgtagagacctcaacctagatgtcccca-gcctgtgtgtcagggttgta--ctct-- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 5961854 177 - 181584905 tgtctggctgaggagaggcctctgcacagtgtccaggcaaggagggagggagttccagcccttagcagcagggt--gacattcctgccggctcagagggctcag-ggggatatagagagtccatcatttgtagagacctcaacctagatgtcccca-gcctgtgtgtcagggttgta--ctct-- i macFas5.chr6 C 0 C 0 s macNem1.NW_012018466v1 992476 179 - 16193990 tgtctggctgaggagaggcctctgcacagtgtccaggcaaggagggagggagttccagcccttagcagcagggt--gacattcctgccggctcagagggctcag-ggggatatagagagtccatcatttgtagagacctcaacctagatgtcccca-gcctgtgtgtcagggttgtactctct-- i macNem1.NW_012018466v1 C 0 C 0 s cerAty1.NW_012007035v1 1813113 174 - 21434487 tgtctggctgaggagaggcctctgcacagtgtccaggcaaggagggagggagttccagcccttagcagcatggt--gacattcctgccggctcagagggctcag-ggg---atatagagtccatcgtttatagagacctcaacctagatgtcccca-gcctgtgtgtcagggttgta--ctct-- i cerAty1.NW_012007035v1 C 0 C 0 s chlSab2.chr23 4775504 177 - 82825804 tgtctggctgagtagaggcctctgcacagtgtccaggcaaggagggagggagttccagcccttagcagcagggt--gacattcctgccggctcagagggctcag-ggggatatagagagtccatcgtttgtagagacctcaacctagatgtcccca-gcctgtgtGTCAGGGTCATA--Ctct-- i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103943v1 281489 175 + 2521317 tgtctggctgaggagaggcctctgcacagtgtccaggcaaggagggagggagttccagcccttagcagcagggt--gacattcctgccggctcagagggctcag-gggg--atagagagtccatcgtttatagagacctcaacctagatgtcccca-gcctgtgtgtcagggttgta--ctct-- i manLeu1.NW_012103943v1 C 0 C 0 s colAng1.NW_012115755v1 1763168 177 - 2415367 tgtctggctggggagaggcctttgcacagtgtccaggcaaggagggagggagttccagcccttagcagcagggt--ggcattcctgccggctcagagggctcag-ggggatatagagagtctgtcgtttgtagagacctcaacctagatgtcccca-gcctgtgtgtcagggttgta--ccct-- i colAng1.NW_012115755v1 C 0 C 0 s calJac3.chr2 64106841 169 + 204313951 tgtgtgactggggagaagcctctgcacagtgtccaggcaaggagggagggaatgccagccctcagcagcggggtt-ggcattcctgcaggctcagagggctcag-gaggatctggagagtccattgtttgtaggtgcctcaacctagatgtcccca-a---------cagggttgta--ctgt-- i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 2232378 178 + 10068113 tgtctggatggggagaggcctctgcacagtgtccaggcaaggaaggagggagtgccagccttcggcagtgaggtt-ggcattcctgcaggctcagagagctcag-ggggatctggagagtccattgtttgtaggcgcctcaacctagatgtcccca-gcctgtgtgtcagggttgta--ccct-- i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016107999v1 87439 175 - 709587 tgtctggct--ggagaggcctctgcacagtgtccaggcaaggcgggagggagtgccagccctcagcagtg-ggtt-ggcattcctgcaggctcagagggctcag-ggggatctggagagtccatggtttgtaggcgcctcaacctagatgttccca-gcctgtgtgtcagggttgta--tcct-- i cebCap1.NW_016107999v1 C 0 C 0 s aotNan1.NW_018501968v1 1187854 176 - 2246441 tgtctggctggggagaagcctctgcacagtgtccaggcaaggagggagggagtgccagccctcagcagcagggtt-ggcattcctgcaggctcagagggctcag-ggggatct--agagtccatcgtttgtaggcacctcaacctacgtgtcccca-gcctgtgtgtcagggttgta--ctct-- i aotNan1.NW_018501968v1 C 0 C 0 s otoGar3.GL873522 1257397 175 + 48283576 tgtcttgctgggaaggggtctctgtgtactgttcagtcacg------gggactgctaacccttagcatggggaacagccacttctgcaggcttagaaggttcag-ggaaatctggagagtcaaaattttgtaggagcctcaacctaggtgtcccca-tcccatgagtcacgattcca--ctcttt i otoGar3.GL873522 C 0 N 0 a score=4727036.000000 s hg38.chr5_KI270795v1_alt 75324 555 + 131892 ctctctctc-c-ttttttttttttttttggcaaggggtagggggacagagtgtcgctatgtcacccaggct-----------ggagtaca-------gtggtgcgatctcagctcactggaacctccgcctcccggattcaagtgattctcctgcctcagcctcctgagtagctgggattacaggtgcatgccaccacacttggctaattttcatatttttaatagagacagggattcaccatgttggccaggctggtttttcatatttt--------------------------------------------------tagtagatacagggattcaccacgttggccaggctggtttctaactcttgacctcgtgatccacccacctcggcctcccaaagtgctgagattacaagcgtgagccactgtgtcaggccacagggttgcgctctcttctaaccagggccctggccttggcacagtagacctgccttggttggagttgcatcttctgtggatcctgagcctggtttctgctttctccgtcctcctggtgcagatgagagcctctttaaacgcc-aacagaagggcctctggctttcacgttagcctttaattgcTGa s panTro5.chr5 5325554 548 - 181907262 --ctctctc-c-ttttttttttttttttggcaaggggtagggggac--agtgtcgctatgtcacccaggct-----------ggagtaca-------gtggtgcgatctcagctcactggaacctccgcctcccggattcaagtgattctcctgcctcagcctcctgagtagctgggattacaggtgcatgccaccacacttggctaattttcatatttttaatagagacagggattcaccatgttggccaggctggtttttcgtatttt--------------------------------------------------tagtagatacagggattcaccacgttggccaggctggtttctaactcctgacctcatgatccacccacctcggcctcccaaagtgctgagattacaagtgtgagccactgtggcaggccacagggttgcgctctcttcta---ggggccctggccttggcacagtagacctgccttggttggagttgcatcttctgtggatcctgagcctggtttctgctttctccgtcctcctggtgcagatgagagcctctttaaacgcc-aacagaagggcctctggctttcacgttagcctttaattgctga i panTro5.chr5 C 0 N 0 s panPan2.chr5 5587971 553 - 183735486 ctctctctc-t-ccttttttttttttttggcaaggggtagggggac--agtgtcactatgtcacccaggct-----------ggagtaca-------gtggtgcgatctcagctcactggaacctccgcctcccggattcaagtgattctcctgcctcagcctcctgagtagctgggattacaggtgcatgccaccacacttggctaattttcatatttttaatagagacagggattcaccatgttggccaggctggtttttcgtatttt--------------------------------------------------tagtagatacagggattcaccacgttggccaggctggtttctaactcctgacctcgtgatccacccacctcggcctcccaaagtgctgagattacaagtgtgagccactgtggcaggccacagggttgcgctctcttctaaccagggccctggccttggcacagtagacctgccttggttggagttgcatcttctgtggatcctgagcctggtttctgctttctccgtcctcctggtgcagatgagagcctctttaaacgcc-aacagaagggcctctagctttcacgttagcctttaattgctga i panPan2.chr5 C 0 N 0 s gorGor5.CYUI01015413v1 1717843 556 + 3967317 ctgtctctctc-ctttttttttttttttggcaaggggtagggggacagaatgtcactatgtcacccaggct-----------ggagtaca-------gtggtgcgatctcagctcactggaacctccgcctcccggattcaagtgattctcctgcctcagcctcctgagtagctgggattacaggtgcatgccaccacacttggctaattttcatatttttaatagagacagggattcaccatgttggccaggctggtttttcatatttt--------------------------------------------------tagtagatacagggattcaccacgttggccaggctggtttctaactcctgacctcatgatccacccacctcggcctcccaaagtgctgagattacaagcatgagccactgtggcaggccacagggttgcgctctcttctaaccagggccctggccttggcacagtagacctgccttggttggagttgcatcttctgtggatcctgagcctggtttctgctttctccgtcctcctggtgcagatgagagcctctttaaacgcc-aacagaagggcctctggctttcacgttagcctttaattgctga i gorGor5.CYUI01015413v1 C 0 N 0 s nomLeu3.chr2 4594685 547 + 163208435 CTCTCTACC-C-A--------TTTTTTTGGCAATGGGTAGGgagacagagtctctctatgtcacccaggct-----------ggagtgca-------gtggtgcgatctcagctcactggaacctccgcctcccggactcaagtgattctcctgcctcagcctcctgagtagctgggattacaggcgcatgccaccacacttggctaattttcatatttttaatagagacagggattcaccatgttggccaggctgTTttttcatatttt--------------------------------------------------tagtagatacaaggattcaccatgttggccaggctggtttctaactcctgacctcatgatccacccacctcggcctcccaaagtgctggggttatgagcatgagccactgtgtcaggccAcagggttgtgctctcttctaaccagggccctggccttggcacagtagacctgccttggttggagttgcatcttctgtggatcctgagcctggtttctgctttctccatcctcctggtgcagatgagagtctctttaaacgcc-aacagcagggcctctggctttcacgttaacctttaattgctga i nomLeu3.chr2 C 0 N 0 s rheMac8.chr6 5776097 552 - 180051392 ctctctctt-t-ttttttttttctttttggcagtgggtagggggacagaatctcgctatgtcacctatgct-----------agagtgca-------gtggtgagatctcagctcactgcgacctccgcctcccgtattcaagcgattctcctgcctcagcctcctgagtagctgggattacaggtgcctgccaccacaccc-gctaattttcatatttttaatagagacagggattcaccatgttggccaggctggtttttcatatttg--------------------------------------------------tagtagagacagggattcaccatgttggccaggctggtttctaaatcctgacctcatgatccacccacctcagcctcccaaagtgctgggattacaagcatgagccgctgtgtcaggccacagggttgcgctgtcttctaaccaaggccctggccttggcacagtagacctgccttggttggagttgtatcttttgtggattctgagcctggtttctgctttctctg---tcctggtgcagaggagagcctctttaaacgccaaacagaagggcctctggctttcacattggcctttaattgctga i rheMac8.chr6 C 0 N 0 s macFas5.chr6 5962031 552 - 181584905 ctctctctt-t-ttttttttttctttttggcagtgggtagggggacagaatctcgctatgtcaccgatgct-----------ggagtgca-------gtggtgagatctcagctcactgcgacctccgcctcccgtattcaagcgattctcctgcctcagcctcctgagtagctgggattacaggtgcctgccaccacaccc-gctaattttcatatttttaatagagacagggattcaccatgttggccaggctggtttttcatatttg--------------------------------------------------tagtagagacagggattcaccatgttggccaggctggtttctaaatcctgacctcatgatccacccacctcagcctcccaaagtgctgggattacaagcatgagccgctgtgtcaggccacagggttgcgctgtcttctaaccaaggccctggccttggcacagtagacctgccttggttggagttgtatcttttgtggattctgagcctggtttgtgctttctctg---tcctggtgcagaggagagcctctttaaacgccaaacagaagggcctctggctttcacattggcctttaattgctga i macFas5.chr6 C 0 N 0 s macNem1.NW_012018466v1 992655 552 - 16193990 ctctctctc-t-ttttttttttctttttggcagtgggtagggggacagaatctcgctatgtcaccgatgct-----------ggagtgca-------gtggtgagatctcagctcactgcgacctccgcctcccgtattcaagcgattctcctgcctcagcctcctgagtagctgggattacaggtgcctgccaccacacct-gctaattttcatatttttaatagagacagggattcaccatgttggccaggctggtttttcatatttg--------------------------------------------------tagtagagacagggattcaccatgttggccaggctggtttctaaatcctgacctcatgatccacccacctcagcctcccaaagtgctgggattacaagcatgagccgctgtgtcaggccacagggttgcgctgtcttctaaccaaggccctggccttggcacagtagacctgccttggttggagttgtatcttttgtggattctgagcctggtttctgctttctctg---tcctggtgcagaggagagcctctttaaacgccaaacagaagggcctctggctttcacattggcctttaattgctga i macNem1.NW_012018466v1 C 0 N 0 s cerAty1.NW_012007035v1 1813287 499 - 21434487 ctctctc-----tttttttcttctttttggcagtgggtagggggacagaatctcgctatgtcaccgatgct-----------ggagtgca-------gtggtgagatctcagctcacggcgacctccgcctcccgtattcaagcgattctcctgcctcagcctcctgagtagctgggattacaggtgcctgccaccacaccc-gctaattttcatatttttaa----------------------------------------------------------------------------------------------------tagagacagggattcaccatgttggccaggctggtttctaaatcctgacctcatgatccacccacctcagcctcccaaagtgctgggattacaagcaagagccgctgtgtcaggccacagggttgcgctgtcttctaaccaaggccctggccttggcacagtagacctgccttggttggagttgtatcttttgtggattctgagcctggtttctgctttctctg---tcctggtgcagaggagagcctctttaaacgccaaacagaagggcctctggctttcacattggcctttaattgctga i cerAty1.NW_012007035v1 C 0 N 0 s chlSab2.chr23 4775681 597 - 82825804 ctctc-------ttttttttttctttttggcagtgggtagggggacagaatctcgctatgtcaccgatgct-----------ggagtgca-------gtggtgcgatctcagctcactgcgacctccgcctcccgtattcaagcgattctcctgcctcagcctcctgagtagctgggattacaggtgcctgccaccacaccc-gctaattttcatatttttaatagagacagggattcaccatgttggccaggctggtttttcatatttgtagtagagacagggattcaccatgttggccaggctggtttttcatatttatagtagagacagggattcaccatgttggccaggctggtttctaaatcctgacctcgtgatccacccacctcagcctcccaaagtgctgggattacaagcatgagccgctgtgtcaggccAcagggttgcgctgtcttctaaccaaggccctggccttggcacagtagacctgccttggttggagttgtatcttttgtggattctgagcctggtttctgctttctctg---tcctggtgcagaggagagcctctttaaacgccaaacagaagggcctctggctttcacattggcctttaattgctga i chlSab2.chr23 C 0 N 0 s manLeu1.NW_012103943v1 281664 553 + 2521317 ctctctctc-ttttttttttttctttttggcagtgggtagggggacagaatctcgctatgtcaccgatgct-----------ggagtgca-------gtggtgagatctcagctcactgcgacctccgcctcccgtattcaagcgattctcctgcctcagcctcctgagtagctgggattacaggtgcctgccaccacaccc-gctaattttcatatttttaatagagacagggattcaccatgttggccaggctggtttttcatatttg--------------------------------------------------tagtagagacagggattcaccatgttggccaggctggtttctaaatcctgacctcatgatccacccacctcagcctcccaaagtgctgggattacaagcatgagccgctgtgtcaggccacagggttgcgctgtcttctaaccaaggccctggccttggcacagtagacctgccttggttggagttgtatcttttgtggattctgagcctggtttctgctttctctg---tcctggtgcagaggagagcctctttaaacgccaaacagaagggcctctggctttcacattggcctttaattgctga i manLeu1.NW_012103943v1 C 0 N 0 s colAng1.NW_012115755v1 1763345 559 - 2415367 ctctct------ctcgttttttctttttggcagcgggtggggggacagaatctcactatgtcaccgatgctgacatatgtcagagatgca-------gtggtgcaatctcagctcactgcgatctccgcctcccggattcaagcgattctcctgcctcagcctcttgagtagctgggattacaggcgcctgccaccacgcccggctaattttcgtatttttaatagagacagggattcaccatgttgaccaggctagtttttcgtatttg--------------------------------------------------tagtagagacagggattcaccatgttggccaggctggtttctaaatcctgacctcgtgatccacccacctcagcctcccaaagtgctgggattacaagcatgagctgctgtgtcaggccacagggttgcgctgtcttctaaccaaggccctggccttggcacagtagacctgccttggttggagttgtatcttttgtggatcctgagcctggtttctgctttctctg---ccctggtgcagaggagagcctctttaaacgcc-aacagaagggcctctggctttcacattggcctttaattgctga i colAng1.NW_012115755v1 C 0 N 0 s calJac3.chr2 64107010 501 + 204313951 ctttattta-t-ttatttattt-----------ggggggaatggacagaggcttgctatgttgcccaggct-----------ggagtgcagtggcgtgtggagtaatttcagctcactgcaacctctgcctcccagatgcaagcaattctcctgcctcagcctcctgagtagctgggattacaggtgtgtgccaccacatctggataattttcgtatttt----------------------------------------------------------------------------------------------------tagtagagacagggattcaccatgttggcccagctggtctcaaactcctgacctcgtgagccacccacctcagccttgcaaagtgctggaattacaagcatgagccactgcacctggccacaggggtgcactctcttctaaccagggccctggccttggcacgggggacccaccttggttggagttgcatcttctgtggatcccaagcctggtttctgctttctctgccctcttgctgcagatgaaagcctctttaaatgcc-aacaaaagggcctctggctttcacattggcctttaaatgctga i calJac3.chr2 C 0 N 0 s saiBol1.JH378186 2232556 497 + 10068113 ctttatttc-t-ttattttttt----------cggggggagtggacagaggcttcctatgtcacccaggct-----------gcagtgca-----gtgtggagtaatctcagctcactgcaacctctgcctcccaaattcaagcaattctcctgcctcagcctcctgagtagctgggattacaggtgtgtgccaccacgcccggctaattttcatatttt----------------------------------------------------------------------------------------------------tagtagagacagggattcaccatgctggcccggctggtctcaaactcctgacctcatgagctacccacctcggcctcacaaagtgctggaattacaagcatgagccaccgcacctggccacaggggtgcgctctcttctaaccagggccctggccgtggcacggtggactcacctgggttggagttgcatcttctgtggatcctgaacctggtttctgctttctctgccctcttgctgcagatgagagcctctttaaatgcc-aacgaaagggcctctggctttcacattggcctttaattgctga i saiBol1.JH378186 C 0 N 0 s cebCap1.NW_016107999v1 87614 503 - 709587 ctttattta-t-ttattttttg---------ggggggggagtggacagaggcttgctatgtcacccaggct-----------gcagtgcagtggtatgtggagtaatcttagctcactgcaacctctgcctcccaaattcaagcaattctcctgcctcagcctcctgagtagctgggattacaggcgtgtgccaccacacccagctaattttcatatttt----------------------------------------------------------------------------------------------------tagtagagacagggattcaccatgttggcctggctggtctcaaactcctgacctagtgagctacccacctcagcctcgcaaagtgctgggattacaagcatgagccaccactcctggccacaggggtgcactctcttctaaccagggtcttggccttggcacggtggacccaccttggttggagttgcatcttctgtggatcccgagcctggttcctgctttctctggcctcttgctgcagatgagagcctctttaaatgcc-aacaaaagggcctctggctttcacattggcctttaattgctga i cebCap1.NW_016107999v1 C 0 N 0 s aotNan1.NW_018501968v1 1188030 502 - 2246441 ctttattta-t-ttattttttg----------tggggggagtggacagaggcttgctatgtcgcccatgct-----------ggagtacagtggcatgtggagtaatctcagctcactgcaacctctgcctcccaaattcaagcaattctcctgcctcagcctcctgagtagctgggattacaggcgtgtgccaccacgcccggctaatttttgtatttt----------------------------------------------------------------------------------------------------tagaagagacagggattcaccatgttgacctggctggtctcaaactcctgacctcgtgagccacccacctcagcctcgcaaagtgctgggattacaaccatgagccactgcgcctggccacaggggtgcgctctcttctaaccagggccctggccttggcacggtggacccaccttgactggagttacatcttctgtggatcccgagcctggtttctgctttctctgccctcttgctgcagatgagaccctctttaaatgcc-aacaaaagggcctctgactttcacattagcctttaattgctga i aotNan1.NW_018501968v1 C 0 N 0 a score=2346.000000 s hg38.chr5_KI270795v1_alt 75879 4 + 131892 gctg s panTro5.chr5_NW_015973214v1_random 36923 4 + 125477 gctg i panTro5.chr5_NW_015973214v1_random N 0 C 0 s panPan2.chrUn_NW_014017559v1 13622 4 - 95236 gctg i panPan2.chrUn_NW_014017559v1 N 0 C 0 s nomLeu3.chr2 160273513 4 - 163208435 gctg i nomLeu3.chr2 N 0 C 0 a score=410762.000000 s hg38.chr5_KI270795v1_alt 75883 464 + 131892 ggactacaggcatgtgtcaccacacccagctaattttttatttttagtagagacggagtttcaccatgttggccaggctggtcttgaactcctgacctcaggtgatcctcctatcttggcctcccaaagtgctggaattacaggcACCCGCCCAGCCAATACATTTTAAAAAATGTTGTATATTGATTTCAGGCCTTTTATTTTCTTAAAAGCAGCAGCTATTTAGCCTAATTCTGAGCAGTGGTTTGTTCTCTGGGCCAGTAGGATTTTATGCATGCTTTTTGTGATCCGTGTTCAAAATCTGCATTGCCAACATTGCAGCTCCAATGTAAGCTTGTTATTCAAATAAATATTTAATTTTTAAACTTGCTTCTGTACTGTATggctgggtacagtggctcatgcctgtaatcccagcattttgggaggctgaggctggtggatcacctgaggtcaggagtttg s panTro5.chr5_NW_015973214v1_random 36927 464 + 125477 ggactacaggcgtgtgtcaccacacccagctaattttttatttttagtagagacagagtttcaccatgttggccaggctggtcttgaactcctgacctcaggtgatcctcctatcttggcctcccaaagtgctggaattacaggcacccgcccggccAATACATTTTTAAAAATTTTGTATATTGATTTCAGGCCTTTTATTTTCTTAAAAGCAGCAGCTATTTAGCCTAATTCTGAGCAGTGGTTTGTTCTCTGGGCCAGTAGGATTTTATGCATGCTTTTTGTGATCCGTGTTCAAAATCTGCATTGCCAACATTGCAGCTCCAATGTAAGCTTGTTATTCAAATAAATATTTAATTTTTAAACTTGCTTCTGTACTGTATggctgggtacaatggctcatgcctgtaatcccagcattttgggaggctgaggtgggtggatcacctgaggtcaggagtttg i panTro5.chr5_NW_015973214v1_random C 0 C 0 s panPan2.chrUn_NW_014017559v1 13626 463 - 95236 ggactacaggcgtgtgtcaccacacccagctaa-tttttatttttagtagagacggagtttcaccatgttggccaggctggtcttgaactcctgacctcaggtgatcctcctatcttggcctcccaaagtgctggaattacaggcacccgcccggccAATACATTTTTAAAAATTTTGTATATTGATTTCAGGCCTTTTATTTTCTTAAAAGCAGCAGCTATTTAGCCTAATTCTGAGCAGTGGTTTGTTCTCTGGGCCAGTAGGATTTTATGCATGCTTTTTGTGATCCGTGTTCAAAATCTGCATTGCCAACATTGCAGCTCCAATGTAAGCTTGTTATTCAAATAAATATTTAATTTTTAAACTTGCTTCTGTACTGTATggctgggtacaatggctcatgcctgtaatcccagcattttgggaggctgaggcgggtggatcacctgaggtcaggagtttg i panPan2.chrUn_NW_014017559v1 C 0 C 0 s gorGor5.CYUI01000356v1 8360 463 + 152767 ggactacaggcgtgtgtcaccacacccagctaattttttatttttagtagagacggagtttcaccatgttggccaggctggtcttgaactcctgacctcaggtgatcctcctatcttggcctcccaaagtgctggaattacaggcACCTGCCTGGCCAATACATTTTAAAAAATGTTGTATATTGATTTCAGGCCTTTTATTTTCTTAAAAGCAGCAGCTATTTAGCCTAATTCTGAGCAGTGGTTTGTTCTCTGGGCCAGTAGGATTTTATGCATGC-TTTTGTGATCCGTGTTCAAAATCTGCATTGCCAACATCGCACCTCCAATGTAAGCTTGTTATTCAAATAAATATTTTATTTTTAAACTTGGTTCTGTACTGTATggctgggtacaatggctcatgcctgtaatcccagcattttgggaggctgaggcgggtggatcacctgaggtcaggagtttg i gorGor5.CYUI01000356v1 N 0 C 0 s nomLeu3.chr2 160273517 459 - 163208435 ggactacaggcatgtgtcaccacacccagctaattttttatttttagtagagacggagtttcaccatgttggccaggctggtcttgaactcctgacctcaggtgatcctcctatcttggcctcccaaagtgctagaattacaggcacccgcccggccAATACATTTTTTACAATTTTGCATATTGATTTCAGGCCTTTTATTTTCGT-AAAGCAGCAGCTATTTGGCCTAATTCTGAGCAGTGTTTTGTTCTCTGGGCCAGGAGGATGTTATGCATGCTTTTTGTGATCCGTGTTCAAAATCTGCATTGCCAACATTGCAGCTCAAATGTAAGCTTGTTATTC----AAATATTTAATTTTTAAACTTGCTTCTGTACTATATggctgggtgcaatggctcatgcctgtaatcccagcgttttgggaggctgaggcgggtggatcacctgaggttaggagtttg i nomLeu3.chr2 C 0 C 0 a score=33348.000000 s hg38.chr5_KI270795v1_alt 76347 387 + 131892 agaccagcctggccagcatggtgaaacctcgtctctactaaaaatacaaagattagttggccatggtggtgggcacctgtaatcccagctactcaggaggctgaggcagaagaatcacttaaacccgggtggcagaggttgcagtgagctgagatcatgccactgcactccagcctgggcgacagagtgagactccatctcaaaaaaaaaaaaaaaaaaaaaaaTTGCTCCTGTATTACCAGATGCCCCTTTTAGTATTATTTTAGAAGCATTGGGAGAGTTTTGGCTAAAGTGCAATTTACCAGAAAACACTAGATTTTAGCTTTATAAAACT--TAAATCTTTCATAGGACCTATATTTTCTTGAATTAAATTTTGCAGTTCTAggc s nomLeu3.chr2 160273976 381 - 163208435 agaccagcctggccaacatggtgaaacctcgtctctactaaaaatacaaaaattagtcgggcatggtggtgggcacctgtaatcccagctactcaggaggctgaggcagaagaatcgcttaaacctgggtggcagaggttgcagtgagctgagatcatgccactgcactccagcctgggcgacagagtgagactccatctcaaaaaaaaaaaaaaa--------TTGTTCCTGTATTACCAGATGCCCCTTTTAGTATTATTTTAGAAGCATTGGGAGGGTTTCGGCTAAAGTGCAATTTACCAGAAAACACTAGATTTTAGCTTTATGAAACTGTTAAATCTTTCATGGGACCTATATTTTCTTGAATTAAATTTTGCAGTTCTAggc i nomLeu3.chr2 C 0 C 0 e gorGor5.CYUI01000356v1 8823 0 + 152767 C e panPan2.chrUn_NW_014017559v1 14089 0 - 95236 C e panTro5.chr5_NW_015973214v1_random 37391 0 + 125477 C a score=16434.000000 s hg38.chr5_KI270795v1_alt 76734 77 + 131892 caggcacagtggctcatgcctgtaatcccagca-tttgggaggccgagg-cgggtggatcatgtgaggtcaggagttca s nomLeu3.chr2 160274357 78 - 163208435 tgggcacagtggcttatgcctgtaatcccagcactttgggaagccaagg-cagatggatcatgtgaggtcaggagttca i nomLeu3.chr2 C 0 C 0 s macFas5.chr6 5644291 79 - 181584905 caggcacggtggctcatgcctgtaatcccagcactttcggagccttaggccgggtggctcatgtgaggtcaggagttcg i macFas5.chr6 N 0 C 0 e gorGor5.CYUI01000356v1 8823 0 + 152767 C e panPan2.chrUn_NW_014017559v1 14089 0 - 95236 C e panTro5.chr5_NW_015973214v1_random 37391 0 + 125477 C a score=111121.000000 s hg38.chr5_KI270795v1_alt 76811 89 + 131892 agaccagcctggccaacatggtgaaactccgtctctacta---aaagtagaaTATAAGTAGTGTATAAGCCCTGGGTCCTAGGCTCTGGGTA s panTro5.chr5_NW_015973214v1_random 37391 89 + 125477 agaccagcctggccaacatggtgaaactccgtctctacta---aaagtaGAGTATAAGTAGTGTATAAGCCCCGGGTCCTAGGCTCTGGGTA i panTro5.chr5_NW_015973214v1_random C 0 C 0 s panPan2.chrUn_NW_014017559v1 14089 89 - 95236 agaccagcctggccaacatggtgaaactccgtctctacta---aaagtaGAGTATAAGTAGTGTATAAGCCCCGGGTCCTAGGCTCTGGGTA i panPan2.chrUn_NW_014017559v1 C 0 C 0 s gorGor5.CYUI01000356v1 8823 89 + 152767 agaccagcctggccaacatggtgaaactccgtctctacta---aaagtaGAGTATAAGTAGTGTATAAGCCCCGGGTCCTAGGCTCTGGGTA i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160274435 89 - 163208435 agaccagcctgtccaacatggtgaaactccatctctacta---aaagtaGAGTATAAGTAGTGTATAAGCCCCAGGTCCTAGGCTCTGGGTG i nomLeu3.chr2 C 0 C 0 s macFas5.chr6 5644370 85 - 181584905 agaccagcctggtcaa-------aaactccatctctactaaGTAGAGTAGAGTATAAGTAGTGTATAAGCACCAGGTCCTAGGCTCTGGGTA i macFas5.chr6 C 0 C 0 a score=91063.000000 s hg38.chr5_KI270795v1_alt 76900 199 + 131892 TAAGCCTCACGTTTTTTCTGGGTATAAGACTTGTGTTTCCTAGGCTCTGGATATAAGCTACATGTCCTAGGCTCTGAGTACAAGCCCAATGTCCTAGGCTCCGTGTATAAGACCCAGGTCCTAAACTCTGGATATAAGCCTTGTGTCCTCGGCTCTGGGTATAAGCCTTGTGTTTTAGTCTTTGGGTATAAGCTCCATA s panTro5.chr5_NW_015973214v1_random 37480 146 + 125477 TAAGCCCCACGTTTTTTATGGGTATAAGACTTGTGTTTCCTAGGCTCTGGGTATAAGCTCCATGTCCTAGGCTCTGAGTACAAGCCCAGTGTCCTAGGCTCAGTGTATAAGACCCGGGTCCTAAA---------------------------CTCTGGATATAAGCCTTGTGT-------------------------- i panTro5.chr5_NW_015973214v1_random C 0 C 0 s panPan2.chrUn_NW_014017559v1 14178 199 - 95236 TAAGCCCCACGTTTTTTATGGGTATAAGACTTGTGTTTCCTAGGCTCTGGGTATAAGCTCCATGTCCTAGGCTCTGAGTACAAGCCCAGTGTCCTAGGCTCAGTGTATAAGACCCGGGTCCTAAACTCTGGATATAAGCCTTGTGTCCTCGGCTCTGGGTATAAGCCTTGTGATTTAGTCTTTGGGTATAAGCTCCATA i panPan2.chrUn_NW_014017559v1 C 0 C 0 s gorGor5.CYUI01000356v1 8912 199 + 152767 TAAACCCCACGTTTTTTCTGGGTATAAGACTTGTGTTTCCTAGGCTCTGGGTATAAGCCCCATGTCCTAGGCTCTGAGTACAAGCCCAATGTCCTAGGCTTAGTGTATAAGACCCGGGTCCTAAACTCTGGACATAAGCCTTGTGTCCTCGGCTCTGGGTATAAGCCTTGTGATTTAGTCTTTGGGTATAAGCTCCATA i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160274524 102 - 163208435 TAAGCC------------------------------TTC-----------------------TGTCATAGACTCTGGGTATAAGCCCCGGCTCCTAGGCACTGGGTATAAGACTTGG----------------------------TCCTAGGCGCTGGGTATAAGCCCTGGGTCTTTGTCTTT---------------- i nomLeu3.chr2 C 0 C 0 e macFas5.chr6 5644455 0 - 181584905 C a score=8501.000000 s hg38.chr5_KI270795v1_alt 77099 27 + 131892 TCCTAGGCTCTGGGTATAAGCTTTGTT s panTro5.chr5_NW_015973214v1_random 37626 26 + 125477 -CCTCGGCTCTGGGTATAAGCCTTGTG i panTro5.chr5_NW_015973214v1_random C 0 I 27 s gorGor5.CYUI01000356v1 9111 27 + 152767 TCCTAGGCTCTGGGTATAAGCTTTGTG i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160274626 17 - 163208435 ----------TGTGTATAAGCCTTGCG i nomLeu3.chr2 C 0 C 0 e macFas5.chr6 5644455 0 - 181584905 C e panPan2.chrUn_NW_014017559v1 14377 0 - 95236 C a score=17551.000000 s hg38.chr5_KI270795v1_alt 77126 35 + 131892 TCCTAGGCTCTGGGTATAAGCCCCACGTCCTTGGC s panTro5.chr5_NW_015973214v1_random 37679 35 + 125477 TCCTAGGCTCTGGGTATAAGCCCCACGTCCTTGGC i panTro5.chr5_NW_015973214v1_random I 27 C 0 s panPan2.chrUn_NW_014017559v1 14377 35 - 95236 TCCTAGGCTCTGGGTATAAGCCCCACGTCCTTGGC i panPan2.chrUn_NW_014017559v1 C 0 C 0 s gorGor5.CYUI01000356v1 9138 35 + 152767 TCCTAGGCTCTGGGTGTAAGCCCCGGGTCCTAGGC i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160274643 13 - 163208435 TCTTAGGCTGTGG---------------------- i nomLeu3.chr2 C 0 C 0 e macFas5.chr6 5644455 0 - 181584905 C a score=29025.000000 s hg38.chr5_KI270795v1_alt 77161 72 + 131892 TCTGTGTATAAGCCCCAAGTCCTAGGCTCTGGGTATAAGCCCCAAATCCTAGGCTCTGGGTATAAGCCCCGG s panTro5.chr5_NW_015973214v1_random 37714 72 + 125477 TCTGTGTATAAGCCCCAAGTCCTAGGCTCTGGGTATAAGCCCCGGGTCCTAGGCTCTGGGTATAAGCTTTGT i panTro5.chr5_NW_015973214v1_random C 0 I 27 s panPan2.chrUn_NW_014017559v1 14412 72 - 95236 TCTGTGTATAAGCCCCAAGTCCTAGGCTCTGGGTATAAGCTTTGTTTCCTAGGCTCTGGGTGTAAGCCCCGG i panPan2.chrUn_NW_014017559v1 C 0 C 0 s nomLeu3.chr2 160274656 67 - 163208435 -----ATGTAAGCCCCAGGTTGTAGTCCCTGGGTATAAGCCCCAGGTCCTAGGATCTGGGTATCAGCCTTGT i nomLeu3.chr2 C 0 C 0 e macFas5.chr6 5644455 0 - 181584905 C e gorGor5.CYUI01000356v1 9173 0 + 152767 C a score=600.000000 s hg38.chr5_KI270795v1_alt 77233 1 + 131892 G s panTro5.chr5_NW_015973214v1_random 37813 1 + 125477 G i panTro5.chr5_NW_015973214v1_random I 27 C 0 s panPan2.chrUn_NW_014017559v1 14484 1 - 95236 G i panPan2.chrUn_NW_014017559v1 C 0 T 108 s nomLeu3.chr2 160274723 1 - 163208435 G i nomLeu3.chr2 C 0 C 0 e macFas5.chr6 5644455 0 - 181584905 C e gorGor5.CYUI01000356v1 9173 0 + 152767 C a score=36180.000000 s hg38.chr5_KI270795v1_alt 77234 80 + 131892 TCCTAGGCTCTGGGTATAAGCCCCGGGTCCTAGGCTCTGGGTGTAAGCCCCAAGTCCTAGGCTCTGGGTGTAAGCCCCGG s panTro5.chr5_NW_015973214v1_random 37814 80 + 125477 TCCTAGGCTCTGGGTGTAAGCCCCGGGTCCTAGGCTGTGGGTGTAAGCCCCAAGTCCTAGGCTCTGGGTGTAAGCCCCAA i panTro5.chr5_NW_015973214v1_random C 0 T 108 s panPan2.chrUn_NW_014017559v1 14377 80 - 95236 TCCTAGGCTCTGGGTATAAGCCCCACGTCCTTGGCTCTGTGTATAAGCCCCAAGTCCTAGGCTCTGGGTATAAGCTTTGT i panPan2.chrUn_NW_014017559v1 T 108 C 0 s nomLeu3.chr2 160274724 80 - 163208435 TCCTAGGCTCCCGGTGTAAGCCCCGGGTCCTAGGCTCTGGGTAGAAGCCCCGGGTCCTAGGCTCTGGGTAGAAGCCCCAG i nomLeu3.chr2 C 0 C 0 e macFas5.chr6 5644455 0 - 181584905 C e gorGor5.CYUI01000356v1 9173 0 + 152767 C a score=44685.000000 s hg38.chr5_KI270795v1_alt 77314 91 + 131892 GTCCTAGGCTCTGGGTGTAAGCCCCGGGTCCTAGGCTCTGGGTGTAAGCCCCGGGTCCTAGGCTGTGGGTGTAAGCCCCGGGTCCTAGGCT s panTro5.chr5_NW_015973214v1_random 37786 91 + 125477 TTCCTAGGCTCTGGGTGTAAGCCCCGGGTCCTAGGCTCTGGGTGTAAGCCCCGGGTCCTAGGCTGTGGGTGTAAGCCCCAAGTCCTAGGCT i panTro5.chr5_NW_015973214v1_random T 108 C 0 s panPan2.chrUn_NW_014017559v1 14457 91 - 95236 TTCCTAGGCTCTGGGTGTAAGCCCCGGGTCCTAGGCTGTGGGTGTAAGCCCCGGGTCCTAGGCTGTGGGTGTAAGCCCCAAGTCCTAGGCT i panPan2.chrUn_NW_014017559v1 C 0 C 0 s nomLeu3.chr2 160274804 91 - 163208435 GTCCTAGGCTCTGGGTAGAAGCCCCGGGTCCTAGGCTCTGGGTAGAAGCCCTGGGTCCTAGGCTCTGGGTAGAAGCCTTGCGTCCTGGGCT i nomLeu3.chr2 C 0 C 0 e macFas5.chr6 5644455 0 - 181584905 C e gorGor5.CYUI01000356v1 9173 0 + 152767 C a score=4872.000000 s hg38.chr5_KI270795v1_alt 77405 7 + 131892 CTGGGTG s panTro5.chr5_NW_015973214v1_random 37877 7 + 125477 CTGGGTG i panTro5.chr5_NW_015973214v1_random C 0 C 0 s panPan2.chrUn_NW_014017559v1 14548 7 - 95236 CTGGGTG i panPan2.chrUn_NW_014017559v1 C 0 C 0 s gorGor5.CYUI01000356v1 9173 7 + 152767 GTGGGTG i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160274895 7 - 163208435 CTGAGTA i nomLeu3.chr2 C 0 C 0 e macFas5.chr6 5644455 0 - 181584905 C a score=62898.000000 s hg38.chr5_KI270795v1_alt 77412 55 + 131892 TAAGCCCCGGGTCCTAGGCGCTGGGTATAAGCCCCGGGTCGTAGGCTCACCCCAG s panTro5.chr5_NW_015973214v1_random 37884 55 + 125477 TAAGCCCCAAGTTCTAGGCACTGGGTATAAGCCCCGGGTCGTAGGCTCACCCCAG i panTro5.chr5_NW_015973214v1_random C 0 C 0 s panPan2.chrUn_NW_014017559v1 14555 55 - 95236 TAAGCCCCAAGTTCTAGGCACTGGGTATAAGCCCCGGGTCGTAGGCTCACCCCAG i panPan2.chrUn_NW_014017559v1 C 0 C 0 s gorGor5.CYUI01000356v1 9180 55 + 152767 TAAGCCCCGGGTCCTAGGCGCTGGGTGTAAGCCCCGGGTCGTAGGCTCACCCCAG i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160274902 55 - 163208435 CCAGCCCCGGGTCCTAGGCTCTGGGTATAAGCCCCGGGTCGTAGGCTCACCCCAG i nomLeu3.chr2 C 0 I 28129 s macFas5.chr6 5644455 54 - 181584905 TAAGCACCCGGTCCTAGGCACTGGGTATAAGACTT-CGTCCTAGGTTCACCCCAG i macFas5.chr6 C 0 C 0 a score=1588554.000000 s hg38.chr5_KI270795v1_alt 77467 1973 + 131892 GACCCCCCAGCACAGGTCCAGTGGCTTCCCGTTATTAGAGGTGAATGTGATCCTGGGCATCATTTATTTGGGGGAAAATTGGATTCTTTGGGGCTCCAGTTCCTCTCTGCTGCTGGCTCTCCTAGGCTGCCAGTCCCACATCCCAC-TTCCCCTGTGTAGAAGGGGGAAGGC--------CACCCCCTCCACACTCCCCCCCATGAGGCtgaaagtggccaaattctcccatagaaaaagtt---tgctgcggctttgaataaacatagaaattgatca-tcccagccttaaagaaagttacatttgtctcagtgga---gttttcttgggaaacctcccagagaacagtagggagctgaaacttacgagctagagctctgggcctgatagtgagaggcctgcccctca-----------gccctccggagtgcctcagccacctggtgtctgttgaccaacgcctttgcctccctgctctctaactcctgtttttccacaactggttacatttcttcTTGGCCAGGCCTCCAGGACCCCCACCCTCTGCACTGCCCTGGATGCTGACGAAGGCTCTCCTTCCCTCTCCCTAACCAGCTCCTCCCCTCCTCCCACCTTTGGCCATGCAGAGGCCCAGCTACACTGTGCCTCTGCCTCTGAGAAATGGCTGGGGGTGCGCTGCGGGGGTGCGCTGCTGGGGAGCCTGGAGCTGGGGTAGGGAT-GGGGGGTTGGGGAGAGGGTGTTGTTCTCAGAGTCCTCTGGGTCGCAACCCCAGCAACCCCAGCAGTACCAGATCTTGCATCCCCACCTGGTTTCCTTGCCCGCT-GTGCAGTGGAAAGGGCGCACCTGTTTGAAAGGAGCGGCTGTGCTTGCAGAGGTGCGCTGACCCAGGATACTGGTGGCCTTTCCAGCACCCGCCTGTCTGGCA--------GCCACCGCCCCACGCTCCTATCCCTGCTTAGTGGAGCCCCGCTGCTACCGCGTCCTGTTCTGACCTCTGCCAGCCCGCGCCCCGCTCCCCTCCGCGTCCTGCT---GCCCGCGTTCTGTACCTGCCCGCGCCCCGCTCCTACGCGTGCGCCACTCCTATCC-GTGCCCCGCTCCTAGCTAAGCCCGGCCCGTGCCCACTCCCACCCGCCGCCTTGCGCTGCCCCTTCCGGCTCCTCCCCAGCAGCCGGCACCCGCCTGGCCCAACAGTGA-CAGAGCAGGGCGCGCAGCCGCTGAGTGCTCTGGAGTCCCTGCCCCGAGGTGCCACGCCCACGTCGGCCTCACCCGGGCAGGCATGGGGCGGTCGGGCTTAGCGCCGCACCCCGCCGGCCAGAGCCACCGTCTCTCCAGACGCGGCCCCAGCGCCCACTGGGGATGGCAAAGACGACATCCGGTGC-GCCGAGGCTGCTCACAAAAGTAAGTCTTGCTGGCTGCAGGCGCCCGCATCGGCCAGTGCAAAGGTGGCCCAGAGTGCCAAGCGGCGGAGCCGA-GCTTTGAGAAGCACCTTTCTGCTTGCGCTGGGCAGCGGGCTGCGTGTGACTGGCCACCTGGCCTCGGCTGGGAGCGCACTGGTGGCGGGCGGCGGGCAGGTCTCTGACAGGAGCAGGCGCCCGCGAGCAGCGGGGCTGGTGCCCAGAACCTAGCGCAGTGGGAGTTCCCAGCGTGGTTGTCCCAAGCACCAAAGCCGGTGTCCTGAAGCAAACAGGGCAGCTCTTTCGGGGCAGGTGTGGGCGAAGGGGC----GGGGAGCCCAGGAAGCCACGAGTGGCACGGGTCTGCTGTTTTTGAAGGAGACGGTGCAGTCCTGGTTTCCttttttaaaattttattttattatgctttaagttctggggtacatgtgcagaaagtgcaggttggttaacaggtatacatgggccacggtggtttgttgcacccatcaacccgtcatcaacattaggtatttctcctaatgctatccct-ccccccagcccccgacaggccccagtgtgtgatgttcccctccctgtgtccatgtattc s panTro5.chr5_NW_015973214v1_random 37939 1972 + 125477 GATCCCCCAGTACAGGTCCAGTGGCTTCCCGTTATTAGAGGTGAATGTGATCCTGGGCATCATTTATTTGGGGGAAAATTGGATTCTTTGGGGCTCCAGTTCCTCTCTGCTGCTGGCTCTCCTAGGCTTCCAGTCCCACATCCCAC-TTCCCCTGTGTAGAAGGGGGAAGGC--------CACCCCCTCCACACTCCCCCCT-TGAGGCtgaaagtggccaaattctcccatagaaaaagtt---tgctgctgctttgaataaacatagaaattgatca-tcccagccttaaagaaagttacatttgtctcaatgga---gttttcttgggaaacctcccagagaacagtagggagctgaaacttacgagctagagctctgggcctgatagtgagaggcctgcccctcacccctccctcagccctccggagtgcctcagccacctggtgtctgttgaccaccgcctctgcctccctgctctctaactcttgtttttccacaactggttacatttcttcTTGGCCAGGCCTCCAGGACCCCCACCCTCTGCACTGCCCTGGATGCTGACGAAGGCTCTCCTTCCCCCTCCCTAACCAGCTCCTCCCCTCCTCCCACCTTTGGCCATGCAGAGGCCGAGCTACACTGTGCCTCTGCCTCTGAGAAATGGCTGGGGGTGCGCTGCGGGGG-------------AGCCTGAAGCTGGGGTAGGGAT-GGGGGGTTGGGGAGAGGGCGTTGTTCTCAGAGTCTTCTGGGTCGCAACCCCAGCAACCCCAGCAGTACCAGATCTTGCATCCCCACCTGGTTTCCTTGCCCGCTTGTGCAGTGGAAAGGGCGCACCTGTTTGAAAGGAGCGGCTGTGCTTGCAGAGGTGCGCTGACCCAGGATACTGGTGGCCTTTCCAGCACCCGCCTGTCTGGT-------------CCGCCCCACGCTCCTATCCCTGCCTAGTGGCACCCCGCTGCTACCGCGTCCTGTTCTGACCTCTGCCAGCCCGCGCCCCGCTCCCCTCCGCGTCCTGCTCCTGCTCGCGTTCTGTACCTGCCCGCGCCCCGCTCCTACACGTGCGCCGCTCCTATCCCGTGCCCCGCTCCTAGCTAAGCCCGGCCCGTGCCCACTCCCACCCGCCGCCTTGCGCTGCCCCTTCCGGCTCCTCCCCAGCAGCCGGCACCCGCCTGGCCCAACAGTGA-CAGAGCAGGGCGCGCAGCCGCTGAGTGCTCTGGAGTCCCTGCCCCGAGGTGCCACGCCCACGTCGGCCTCACCCGGGCAGGCATGGGGCGGTCGGGCTTAACGCCGCACCCCGCTGGCCAGAGCCACCGTCTCTCCAGACGCGGCCCCAGCGCCCACTGGGGATGGCAAAGACGACATCCGGTGC-GCCGAGGCTGCTCACAAAAGTAAGTCTTGCTGGCTGCAGGCGCCCGCATCGGCCAGTGCAAAGGTGGCCCAGAGTGCCAAGCGGCGGAGCCGAGGCTTTGAGAAGCACCTTTCTGCTTGCGCTGGGCAGCGGGCTGCGTGTGACCGGCCACCTGGCCTCGGCTGGGAGCGCACTGGTGGCGGGTGGCGGGCAGGTCTCTGACAGGAGCAGGCGCCCGCGGGCAGCGGGGCTGGTGCCCAGAACCTAGCGCAGTGGGAGTTCCCAGCGTGGTTGTCCCAAGCGCCAAAGCCGGTGTCCTGAAGCAAACAGGACAGCTCTTTCCGGGCAGGTGTGGGCGAAGGGGC----GGGGAGCCCAGGAAGCCACGAGTGGCACGGGTCTGCTGTTTTTGAAGGAGATGGTGCAGTCCTGGTTTCCttttttaaaattttattttattatgctttaagttctggggtacatgtgcagaatgtgcaggttggttaacaggtatacatgggccatggtggtttgctgcacccatcaacccgtcatcaacattaggtatttctcctaatgctgtccctccccccccgcccccgacaggccccagtgtgtggtgttcccctccctgtgtccatgtatcc i panTro5.chr5_NW_015973214v1_random C 0 C 0 s panPan2.chrUn_NW_014017559v1 14610 1974 - 95236 GATTCCCCAGTACAGGTCCAGTGGCTTCCCGTTATTAGAGGTGAATGTGATCCTGGGCATCATTTATTTGGGGGAAAATTGGATTCTTTGGGGCTCCAGTTCCTCTCTGCTGCTGGCTCTCCTAGGCTTCCAGTCCCACATCCCAC-TTCCCCTGTGTAGAAGGGGGAAGGC--------CACCCCCTCCACACTCCCCCCT-TGAGGCtgaaagtggccaaattctcccatagaaaaagtttgctgctgctgctttgaataaacatagaaattgatca-tcccagacttaaagaaagttacatttgtctcaatgga---gttttcttgggaaacctcccagagaacagtagggagctgaaacttacgagctagagctctgggcctgatagtgagaggcctgcccctcacccctccctcagccctccggagtgcctcagccacctggtgtctgttgaccaccgcctctgcctccctgctctctaactcttgtttttccacaactggttacatttcttcTTGGCCAGGCCTCCAGGACCCCCACCCTCTGCACTGCCCTGGATGCTGACGAAGGCTCTCCTTCCCCCTCCCTAACCAGCTCCTCCCCTCCTCCCACCTTTGGCCATGCAGAGGCCGAGCTACACTGTGCCTCTGCCTCTGAGAAATGGCTGGGGGTGCGCTGCGGGGG-------------AGCCTGAAGCTGGGGTAGGGATGGGGGGGTTGGGGAGAGGGCGTTGTTCTCAGAGTCTTCTGGGTCGCAACCCCAGCAACCCCAGCAGTACCAGATCTTGCATCCCCACCTGGTTTCCTTGCCCGCT-GTGCAGTGGAAAGGGCGCACCTGTTTGAAAGGAGCGGCTGTGCTTGCAGAGGTGCGCTGACCCAGGATACTGGTGGCCTTTCCAGCACCCGCCTGTCTGGT-------------CCGCCCCACGCTCCTATCCCTGCCTAGTGGCACCCCGCTGCTACCGCGTCCTGTTCTGACCTCTGCCAGCCCGCGCCCCGCTCCCCTCCGCGTCCTGCTCCTGCCCGCGTTCTGTACCTGCCCGCGCCCCGCTCCTACACGTGCGCCGCTCCTATCCCGTGCCCCGCTCCTAGCTAAGCCCGGCCCGTGCCCACTCCCACCCGCCGCCTTGCGCTGCCCCTTCCGGCTCCTCCCCAGCAGCCGGCACCCGCCTGGCCCAACAGTGA-CAGAGCAGGGCGCGCAGCCGCTGAGTGCTCTGGAGTCCCTGCCCCGAGGTGCCACGCCCACGTCGGCCTCACCCGGGCAGGCATGGGGCGGTCGGGCTTCACGCCGCATCCCGCTGGCCAGAGCCACCGTCTCTCCAGACGCGGCCCCAGCGCCCACTGGGGATGGCAAAGACGACATCCGGTGC-GCCGAGGCTGCTCACAAAAGTAAGTCTTGCTGGCTGCAGGCGCCCGCATCGGCCAGTGCAAAGGTGGCCCAGAGTGCCAAGCGGCGGAGCCGAGGCTTTGAGAGGCACCTTTCTGCTTGCGCTGGGCAGCGGGCTGCGTGTGACCGGCCACCTGGCCTCGGCTGGGAGCGCACTGGTGGCGGGCGGCGGGCAGGTCTCTGACAGGAGCAGGCGCCCGCGGGCAGCGGGGCTGGTGCCCAGAACCTAGCGCAGTGGGAGTTCCCAGCGTGGTTGTCCCAAGCGCCAAAGCCGGTGTCCTGAAGCAAACAGGACAGCTCTTTCCGGGCAGGTGTGGGCGAAGGGGC----GGGGAGCCCAGGAAGCCACGAGTGGCACGGGTCTGCTGTTTTTGAAGGAGATGGTGCAGTCTTGGTTTCCttttttaaaattttattttattatgctttaagttctggggtacatgtgcagaatgtgcaggttggttaacaggtatacatgggccatggtggtttgctgcacccatcaacccgtcatcaacattaggtatttctcctaatgctgtccct-cccccccgcccccgacaggccccagtgtgtggtgttcccctccctgtgtccatgtatcc i panPan2.chrUn_NW_014017559v1 C 0 C 0 s gorGor5.CYUI01000356v1 9235 1943 + 152767 GACCCCCCAGCACAGGTCCAGTGGCTTCCCGTTATTAGAGGTGAATGTGATCCTGGGCATCATTTATTT-GGGGAAAATTGGATTCTTTGGGGCTCCAGTTCTTCTCTGCTGCTGGCTCTCCTAGGCTGCCAGTCCCACATCCCAC-TTCCCCTGTGTAGAA-GGGGAAGGC--------CACCCCCTCCACACTCCCCCCA-TGAGGCtgaaaatggccaaattctcccatat-aaaagtt---tgctgctgctttgaataaacatagaaattgatcattcccagccttaaagaaagtt--atttgtctcaatgga---gttttcttgggaaacctcccagagaacagtagggagctg-aacttacgagctagagctctgggcctgatagtgagaggcctgcccctcacccctccctcagccctccggagtgcctcagccacctggtgtctgttgaccaccgcctctgcctccctgctctctaactcttgtttttccacaactggatacatttcttcTTGGCCAGGCCTCCAGGACCCCCACCCTCTGCACTGCCCTGGATGCTGACGAAGGCTCTCCTTCCCCCTCCCTAACCAGCTCCTCCCTTCCTCCCACCTTTGGCCATGCAGAGGCCGAGCTACACTGTGCCTCTGCCTCTGAGAAATGGCTGGGGGTGCGCTGCGGGGG-------------AGCCTGAAGCTGGGGTAGGGAT-GGGGGGTTGGGGAGAGGGCGTTGTTCT--GAGTCTTCTGGGTCGCAACCCCAGCAACCCCAGCAGTACCAGATCTTGCATCCCCACCTTGTTTCCTTGCCCGCT-GTGCAGTGGAAAGGGCGCACCTGTTTGAAAGGAGCGGCTGTGCTTGCAGAGGTGCGCTGACCCAGGATACTGGTGGCCTTTCCAGCACCCGCCTGTCTGGCA--------GCTACCGCCCCACGCTCCTATCCCTGCCTAGTGGCGCCCCGCTGCTACCTCGTCCTGTTCTGACCTCTGCCAGCCCGCGCCCCGCT-CCCTCCGCGTCCTGCTCCTGCCCGCGTTCTGTACCTGC-----CCCCGCTCCTACG-------------------GTGCGCCGCTCCTAGCTAAACCCGGCCCGTGCCCACTCCCACCCGCCGCCTTGCGCTGCCCCTTCCGGCTCCTCCCCAGCAGCCGGCACCCGCCAGGCCCAACAGTGA-CAGAGCAGGGCGCGCAGCCGGTGAGTGCTCTGGAGTCCCTGCCCCGAGGTGCCACGCCCACGTCGGCCTCACCCGGGCAGGCATGGGGCGGTCGGGCTTAACGCCGCACCCCGCCGGCCAGAGCCACCGTCTCTCCAGACGCGGCCCCAGCGCCCACTAGGGATGGCAAAGACGACATCCGGTGC-GCCGAGGCTGCTCACAAAAGTAAGTCTTGCTGGCTGCAGGCGCCCGCATCGGCCAGTGCAAAGGTGGCCCAGAGTGCCAAGCGGCGGAGCCGAGGCTTTGAGAAGCACCTTTCTGCTTGCGCTGGGCAGCGGGCTGCGTGTGACCGGCCACCTGGCCTCGGCTGGGAGCGCACTGGTGGCGGGCGGCGGGCAGGTCTCTGACAGGAGCAGGCGCCCGCGGGCAGCGGGGCTGGTGCCCAGAACCTAGCGCAGTGGGAGTTCCCAGCGTGGTTGTCCCAAGCGCCAAAGCCGGTGTCCTGAAGCAAACAGGACAGCTCTTTCGGGGCAGGTGTGGGCGAAGGGGC----GGGGAGCCCAGGAAGCCACGAGTGGCACGGGTCTGCTGTTTTTGAAGGAGATGGTGCAGTCCTGGTTTCCttttttaaaattttattttattatgctttaagttctggggtacatgtgcagaatgtgcaggttggttaacaggtatacatgggccatggtggtttgctgcacccatcaacccgtcatcaacattaggtatttctcctaatgctatccct-cccccccgcccccgacaggccccagtgtgtgatgttcccctccctgtgtccaagtgttc i gorGor5.CYUI01000356v1 C 0 C 0 s macFas5.chr6 5644509 1881 - 181584905 GACCCCCTAGCACAGGTCCAGTGGCTTCTCGTTATTAGAGGTGAATGTGATCCTGGGCATCATTTCTTTGGGGGAAAACTGGATTCTTTGGGGCTCCAGTTCCTCTATGTTGCTGGCTCTCCTAGGCTGCCAGTACCACATCCCGCATTCTCTTGTGTACGGGCGGAAGGGCACCCCAGGCACCCCCTTCACACTTCCCCCA-TGAGGCtgaaagtggtcaaattctcccatag---aagtt---tgctgcttccttgaataaacatagaaattgatca-tcccagcc-taaagaaagttacatttgtctcaatggagttgttttcttgggaaatgtcccagagaacagtagggagctgaaacttac------cagctcggggcctgacagtgaga-gcctgcccctcacccctcccgcacccctcccgggtgcctcagccacctggtgtctgttgaccaacgcctctgcctccctcctccctaactcttgttttcccacaactggtgacatttcttcccggccaGGCCTCCGGGACCCCCACCCTCCGCACTGCTCTGGATGCTGACAAAGGCTCTCCTGCCTGCTCCCTGCCCAGCTCCTCCCTTCCTCCCGCCTTTGGCCATGCAGAGGCCGAGCTCCACCGTGCCTCTGCCTCTCAGAAATAGCTGGGGGTGCGCTGCGGGGG-------------AGCCTGGAGCATGGGTAGGGGAAGGGGTTTTGGGGAGAGGGCGTTGTTCTCAGAGTCCTCTGTGTGGCA--------AACCCCAGGAGTACCAGATCTTGCATCCCCACCTGGCTTCCCTGCCCGCT-GTGCAGTAGAAAGGGCGCACCTGGCT-AAAGGAGCGGCTGTGCCCGCAGAGATGCACGGACCCA-GCTACTGGTGGCCTTTCCAGCACCCGCCCGTCTTCCAGCTGTCTGGCTACTGCGCCATGCTCCTGCCCCTGCCCAGTG-------------------------------------------GCGCCTGGCTCCCGTCCGCGTCCT------GACCCCATTCTGCACCTGC-------------------------------------ACGCCCCGCTCCTACCTAAGGCAGACCGGCGCCCGCTCCTACCCGCCGCTTTGCGCTGCCCCTTCCGGCTCCTTCGGAGCAGCCGGCACCCACCTGGCCCAACAGTGATCAGAGTAGGGCGCGCAGCCGCTGAATGCTCTGGAGTCCCTGCCCGGAGGTGCCACGCCCGCATCGACCACACCCGGGCTGGCATGGGGCTGCGGGACTTAACGCCGCACCCCACCGACCAGAGCCACCGTCTCTACAGCCGCGGCCCCAGCGCGCACTGGGGATAGCAAAGACGACATCCGGTGCTGCCGCGGCTGCTCG-GCAAGTCAGTCTTGCTGGTTACAGGCGCCCGCACGGGCCAGCGCAAAAGTGGCCCGGAGTGCCAAGCGACGGAGCCAAGGCTTTGAGCACCACCTTTCTGCTTGCGCTGGGCAGGGGGCTGCATGTGACCGGCCACCTGGCCTTGGCTGGGAGCGCACTGGTGGCGGGCAGCAGGCAGGTCTCTGGCAGGAGCAGGTGCCCGTCGGCAGCGGGGCCAGTGCTCAGAACCTAGCACGGTGGGAGTTCCCAGCGTGGTTGTCCCGAGCGCCAAAGCCGGTATCCTGAAGGAACCAGGACAGCTCTTTCAGGGCAGGTGTGGGCGAAGGGGCAGGGAGGGAGCCCAGGAAGCTGCGACAGGCACCGGGGT-CTGTTTTTGCAGGAGGTGGCACAGTCCTGG-----TTTTTTAAAATTGTATTTCTttatgctttaagttctggggcacatgtgcagaatgtacgggtccgttaataggtatacatgtgccatggtggtttgctgcacccatcaacccgtcatcaacattaggtattt---ctaatgcgatccct--ccccccggccccaacagggcccagtgtg---tgttcccctccctgtgtccatgtattc i macFas5.chr6 C 0 C 0 e nomLeu3.chr2 160274957 28129 - 163208435 I a score=102480.000000 s hg38.chr5_KI270795v1_alt 79440 457 + 131892 tcattgttcaactcccacttatgagtgagaacatgtggtgtttggttttctgttcctgtgttagtttgctgagaatgatgtttcccagcttcatccatgtccctgcaaaggacaggaactcatccttttttatggctgcatagt----------gtatatgtgccacgttttctttatccagtctatcattgatggacatttgggttggttccaagtctttgctattgtggaacagtgccgcaataaacatatgtgtgcttgtgtctttatagtagaatgattgataatcctttgggtatatacccagtaatgggattgctgggtcaaattgta-tttctatttctagatccttgaggatgtggagaaataggaacgcttttacactgttggtaggagtgtaaattagttcaaccattgtggaagac-agtgtggcgattcctGGTTTCCTTTTTGAGCTCTACCTTCG s gorGor5.CYUI01000356v1 11178 467 + 152767 tcattgttcaactcccacttatgagtgagaacatgtggtgtttggttttctgttcttgtgttagtttgctgagaatgatgtttcccagcttcatccatgtccctgcaaaggacaggaactcattcttttttatggttgcatagtattccatggtgtatatgtgccacgttttctttatccagtttatcattgatggacatttgggttggttccaagtctttgctattgtggaacagtgccgcaataaacatatgtgtgcttgtgtctttatagtagaatgattgataatcctttgggtatatacccagtaatgggattactgggtcaaattgta-tttctatttctagatccttgaggatgtggagaaataggaacgcttttacactgttgctaggagtgtaaattagttcaaccattgtggaagac-agtgtggtgatacctGGTTTCCTTTTTGAGCTCTACCTTCC i gorGor5.CYUI01000356v1 C 0 C 0 s macFas5.chr6 5646390 438 - 181584905 tcattgttcaactcccactta----tgagaacacgcggtgtttgg--ttctgttcct------gtttgctgaga---atgttttccagcttcatccatgtccctccaaaggacacaaactca--------tatggctgcatagtattctatggtgtatatgtgccacattttctttatccagtctatcattgatggggatttgggttggtgccaagtctttgctattgt-gaacagtgcggcaataaacatacatgtgcatgtgtctttatagtagaa----tgataatcttttaggtatatacccagtaatgggattgctaggtcatatggtattttctagttctagatcctt---gatgtggagaaataggaacgctcttacagtgttggtaggagtgtaaattagttcaaccattgtggaagacaagtgtggcgattcctAGTTTCCTTTTTGACCTCTACCTTCC i macFas5.chr6 C 0 C 0 e nomLeu3.chr2 160274957 28129 - 163208435 I e panPan2.chrUn_NW_014017559v1 16584 0 - 95236 C e panTro5.chr5_NW_015973214v1_random 39911 0 + 125477 C a score=2830025.000000 s hg38.chr5_KI270795v1_alt 79897 3487 + 131892 TCATTCCTCCTCCAGCTCTGCCGCTTTGGCTGGCAGAGGAGTGCAGAGGCTCTCTTTGGCAAGGTTGCTTTGCTCTCCTGCGTTTTTGCCA-CCTGGTCTTTAAAAACCTAAAAGCCTGTG--GTTTCTGGGGTGGCTCCCTTGGAGGGGCTGCAGTGGGCTGAGACCCAGCCTGCAGCCTGGGAGTTCTGTGCCACTGTCTGGGAGGGCACCTGAAGATGTGGCTTTGGGGCCATGGGAGG-TCAGGGACAACACTTATGGGTGCAAGTTTTGGGTCTGGGTGTCGGG-GCCAGGGGTGCTGCTGCACTGAGGATGAGGTGCAGGGTGTGGT-----GTTGAGTGTCAGGGGCAGAGTTGCTGCAGTGCAGAGGACAGAGGTGGTGC----AGGGCAGGGTTCCTGGGCATGAAAAGGCAGGGGtgacagagcaggagcaccgtcatctcagacaaacaccgccactttaagttccagctccctttctagccccatgcatttcaaggatatcacttaacttctaactacaagcagcagccagaaagagc-aggcagta----aaagataagacagcttgggcacagagggaggtggggggaggggggaaagtctctcaagtaactaccaaacttcaccctcat-acaatgggccccagtaaaccagtgggccttaataatcacagtcctttcccttcagatgcgctaagata--gggaagcta-aagcagactcgggggagg--ggaggtatgcctgcggctgaagcaagatgtatgggaacagacacacaattctccctcccagataagcacaacaaagagacataggagcagtgcaagcctctgataaactctcccaccctgaatccttaaaaacttttagcatgtaggggagtgcggcttctgacttgacttggacagaagtccctcccaggtttgaaataaacc------tgctgactgttgagccacccttcgtgtttctctcctctttaattcttacaACCCCTCCTTCTGAGATGGAGATGtttccagctggggaaactgaggctcagagagagtcgac-taaGGGAAGGCAAGAAAGGGAGGCAGAGCCCCCTGCAGGCCCTCCTCACCCGAGGAACTGAGAGAAGCCAGGGCCA-GGGCCTGGCCTGCCTTGCAACCCACTCTGCCTCCACCTCTCCTTGTGGGACCTC--GGGGTGGCCCCATTTCCCTTGTGCGGGCGAGGAGCTCCTTTTTGCTGCCTGATGTTTTGGATCCTGAGCCCACACCCAGGCAGGGCTGTCTCCTCTCCCTATAGTTGCTGAGGCCATCAGGCCGCAGGCTTC--ACCTCTGTTCTCTACTGGGTGA--TCCTCTGGTCAGGTCCCTGGGTGTGCATGTGGAGGAAGGTGTGCATCCGTGTGCATGTGTGTCCACACATGTGAACACAGGTGTATGCATGTGTGCACGTATGCAAGTGTACAG------GGGTGCACCCACATGAGGCTCCCCAGACCTTTTCCCCAGGAGAAGACCATATCTCC-CCCTGGTGTCAGGTGTCCACTCAAGCCCTCCAAGGGTGGGGATGGGGAGAAGGGAAAAGTGCCTGGGATGCCAGGCAGGAGTGCAGGCTCAGATGGGCCCTGAGGTGGTCACAGAGCTGAGCCAGGCATCCAGTCTGTGCAGCAGCCAAGATGTGGCCAGAGAGGTTCCTGGGAGGT-GGGGGCGGGGGGGTGCTATTCAGGCCCACCCCCTTCTCTCTTCATTCTCCTAGGGGACAGTCACAGGAGCTTGTCTGTTGCCAAAAGTCCCCCTCAGCCCCTCCCTACCTACAATGTCCCTTCCCTGGGCATAGGCCTGAGTGTGAAGACTGTGTAGCTGCTAGCAACAGAAACGGGGCTTGTATGCACCCAAGGGAGACAACTCCAGCTCTGTAAAGCCTGGCGGGGGTGGGTGGCAGGCAGCAGAGGGTCCAGTGGTTTAGGGTACCTCTCGTGGGCTGGCTGCCCACACCACCTACCCCTCAGCAGGCCGGCTCTGGACATAGCGGTTGGCCAAGTCTGAGCCAGCCCGTCTTGGCAACTCCTCCTCCTGCCTGCCAGGGTGACTTCACTTTTTCAGATCTGCAGTGATGTGCAGATCACTGATTCAGCCCTGAGCTCAGCCAGGATGCAGGAGAAAGAGGAGGGGCTGGCCCCGGGGCACCCCAGGCCCAGCTTCCTGGGCCCTCCCACCCCATGGCCCCATGGGCTTCCCTTCCTCCATCTGTCTGTGGCTGGGTGCAGGCCAGACCTCAAGAGGCAGCTGGGGGATATGGAAAGAACAGGGACTTTCCCCACAGAAGCCCAGAACCCA----CCTCCTACCTCACCCCAGGACCCCCCTGACAGGTCCATGGCTTCCCCTTTTTAGAGGTGAATGTGATGC---TGGGCATCATTTCTTCGGGGGAAAACTGGATTCTCTGGGGCTCCATGCTGGCTCTCCTAGTCCCACACCCCGTGCTTTCCTGTGTAGAGGAGGGAAGGGCCCCCCCC----ACTCCCCCAATGAGGTGgaaagtagccaaattctcctgtag---atgtttactgcttctttgaataaatgtagaaattgatcctcccagtcttaaagaaagttacatttgtctcactggagttggtttctccgg-aaacctcccagagaacagtagggagttgaaacttaccagctcggggcctgacattgacaggcctgcccctcacccctctggactgcctcagccacctggtgcctgttgaccaacgcctctgcctcccgcctc------cctaattcttgtttttc--caaacctggttaca-tttttcccAGGCCTGGCCTCCAGGACCCCCACCCTCTGCACTGCCCTGGATGCTGACAAACGCTCTCCTGCCcccttccctgcccatatcttcc-cttccTCTGGCCTCTAGCCCCACAGAGGCTGAGCTCCACCGAGCCTCTGCCTCAGGAGAAATGGCTGGGGATGCGCTCTGGTGGGGGGAGCCTGGAGC-TGGGGTAGGGATGGGCGGTTGGCGGGGAGGGTGGTGTTCTCAGAGTCCTC-GGGTCACAACCCCAGCAGTCTCAGATCTTGCAT-CCTGCACGGCTTCCCTGCTGTCTTTGTGCAGCAAAAAGGGCAAAGCACAGGGACTGC-AGGCAGGTGCACCTGGTGAAAGGAGGGGCTGTGCGTGCAAAGGCGAGCGGACTCAGGTTAGTGGTGGCCTTC-CCAGCACCACGCcctgctcccgcctgcgccctgctcctacctctgccggccggctttgctcttacccgcgccccgctcctgtggcgacccgctcctat-ccctgcctggcccgctccccgctcctgcccctgcccctgcccctgcctggcccccgccccgctcctgcccttgcacagtccgcgctcctctcctacatgccgcctgcgtgcttcccctgcctgctcctctcGCGCACGGCGCTCGCCTGGCGGGCAGAGACCAGAGCAGGGCGTACAGCAGCTCAGATTGCCCAGGAGTCCCTGCCCAGAGGTG s panTro5.chr5_NW_015973214v1_random 39911 3490 + 125477 tcattCCTCCTCCAGCTCTGCCGCTTTGGCTGGCAGAGGAGTGCAGAGGCTCTCTTTGGCAAGGTTGCTTTGCTCTCCTGCGTTTTTGCCA-CCTGGTCTTTAAAAACCTAAAAGCCTGTGTGGTTTCTGGGGTGGCTCCCTTGGAGGGGCTGCAGTGGGCTGAGACCCGGCCTGCAGCCTGGGAGTTCTGTGCCGCTGTCTGGGAGGGCACCTGAAGATGTGGCTTTGGGGCCATGGGAGG-TCAGGGACAACACTTATGGGTGCAAGTTTTGGGGCTGGGTGTCGGG-GCCAGGGGTGCTGCTGCACTGAGGATGAGGTGCAGGGTGTGGT-----GCTGAGTGTCAGGGGCAGAGTTGCTGCAGTGCAGAGGACAGAGGTGGTGC----AGGGCAGGGTTCCTGGGCATCAAAAGGCAGGGGtgacagagcagaagcaccgtcatctcagacaaacaccgccactttaagttccagctctctttctagccccatgcatttcaaggaaatcacttaacttctaactacaagcagcagccagaaagagc-aggcagta----aaagataagagagctcgggcacagagggaggtggagggaggggggaaagtctctcaagtaactgccaaacttcaccctcat-acaatgggccccagtaaaccagtgggccttaataatcacagtcctttcccttcagatgcactaagata--gggaagcta-aagcagactcgggagagg--ggaggtatgcctgcggctgaagcaagatgtatgggaacggacacacaactctccctcccagataagcacaacaaagagacataggagcagtgcaagcctctgataaactctcccaccctgaatccttaaaaacttttcgcatgtaggcaagtgcggcttctgacttaacttggacagaagtccctcccaggtttgaaataaacc------tgctaactgttgagccacccttcgtgtttctctcctctttaattcttacaACCCCTCCTTCTGAGATGGAGATGtttccagctggggaaactgaggctcagagagagttgac-taaGGGAAGGCAAGAAAGGGAGGCAGAGCCCCCTGCAGGCCCTCCTCACCCGAGGAACTGAGAGAAGCCAGGGCCA-GGGCCTG-----CCTTGCAACCCACTCTGCCTCCACCTCCCCTTGTGGGACCTCAGGGGGTGGCCCCATTTCCCTTGTGTGGGCGAGGAGCTCCTTTTTGCTGCCTGATGTTTTGGATCCTGAGCCCACACCCAGGCAGGGCTGTCTCCTCTCCCTATAGTTGCTGAGGCCATCAGGCCCCAGGCTTC--ACCTCTGTTCTCTACTGGATGA--TCCTCTGGTCAGGTCCCTGGGTGTGCATGTGGAGGAAGGCGTGCATCTGTGTGCATGTGTGTCTACACGTGTGAACACAGGTGTATGCATGTGTGCACGTATGCAAGTGTACAG------GGGTGCACCCAGGTGAGGCTCCCCAGACCTTTTCCCCAGGAGAAGAGCATATCTCC-CCCTGGTGTCAGGTGTCCACCCAAGCCCTCCAAGGGTGGGGATGGGGAGAAGGGAAAAGTGCCTGGGATGCCAGGCAGGAGTGCAGGCTCAGATGGGCCCTGAGGTGGTCACAGAGCTGAGCCAGGCATCCAGTCTGTGCAGCAGCCAAGATGTGGCCAGAGAGGTTCCTGGGAGGT-GGGGGTGGGGGG-TGCTATTCAGGCCCACCCCCTTCCCTCTTCATTCTCCTAGGGGACAGTCACGGGAGCTTGTTTGTTGCCAAAAGTCCCCCTCAGCCCCTCCCTACCTACAATGTCCCTTCCCTGGGCATAGGCCTGAGTGTGAAGACTGT--AGCTGCTAGCAACAGAAACGGGGCTTGTATGCACCCAAGGGAGCCAACTCCAGCTCTGTAAAGCCTGGCGGGGGTGGGTGGCAGGCAGCAGAGGGTCCAGTGGTTTAGGGTACCTCTCGTGGGCTGGCTGCCCACACCACCTACCCCTCAGCAGGCCGGCTCTGGACATAGTGGTTGGCCAAGTCCGAGCCAGCCCATCTTGGCAACTCCTCCTCCTGCCTGCCAGGGTGACTTCACTTTTTCAGATCTTCAGTGATGTGCAGATCACTGATTCAGCCCTGAGCTCAGCCAGGATGCAGGAGAAAGAGGAGGGGCTGGCCCCGGGGCACCCCAGGCCCAGCTTCCTGGGCCCTCCCATCCCATGGCCCCATGGGCTTCCCTTCCTCCATCTGTCTGTGGCTGGGCGCAGGCCAGACCTCAAGAGGCAGCTGGGGGATGTGGAAAGAACAGGGACTTTCCCCACAGAAGCCCAGAACCCA----CCACCTACCTCACCCCAGGAACCCCCTGACAGGTCCATGGCTTCCCCTTGTTAGAGGTAAATGTGATGCCCCTGGGCATCATTTCTTCGGGGGAAAACTGGATTCTCTGGGGCTCCATGCTGGCTCTCCTAGTCCCACACCCCGTGCTTTCCTGTGTAGAGGAGGGAAGGGCCCCCCCCCCACACTCCCCCCATGAGGTGgaaagtagccaaattctcctgtag---atgtttactgcttctttgaataaatgtagaaattgatcctcccagtcttaaagaaagttacatttgtctcactggagttggtttctccgg-aaacctcccagagaacagtagggagttgaaacttaccagctcggggcctgacattgacaggcctgcccctcacccttctggactgcctcagccacctggtgcctgttgaccaacgcctctgcctcccgcctc------cctaattcttgtttttc--caaaactggttaca-tttttcccAGGCCAGGCCTCCAGGACCCCCACCCTCTGCACTGCCCTGGATGCTGACAAAGGCTCTCCTGCCcccttccctgcccatatcttcc-cttcctctcacttcTAGCCCCACAGAGGCTGAGCTCCACCCAGCCTCTGCCTCAGGAGAAATGGCTGGGGATGCGCTCTGGTTGGGGGAGCCTGGAGC-TGGGGTAGGGATGGGCGGTTGGCGGGGAGGGTGGTGGTCTCAGAGTCCTC-GGGTCGCAACCCCAGCAGTCCCAGATCTTGCAT-CCTGCTCGGCTTCCCTGCTGTCTTTGTGCAGCAAAAAGGGCAAAGCACAGGGACTGC-AGGCAGGTGCACCTGGTGAAAGGAGGGGCTGTGCGTGCAAAGGTGAGCGGACCCAGGTTACTGGTGGCCTTC-CCAGCACCACGCcctgctcccgcccgcgccctgctcctacctctgccggccggctttgctcttacccgcgccccgctcctgtggcgacccgctcctat-tcctgcctgacccgctccccgctcctgcccctgcccctgcccctgcctggcccccgccccgctcctgcccttgcacagtctgcgctcctctcctacatgccgccttggtgctgcccctgccggctcctctcGCGCACAGCACTCGCCTGGCGGGCAGAGACCAGAGCAGGGCGTACAGCAGCTCGGATTGCCCAGGAGTCCCTGCCCAGAGGTG i panTro5.chr5_NW_015973214v1_random C 0 C 0 s panPan2.chrUn_NW_014017559v1 16584 3486 - 95236 tcattCCTCCTCCAGCTCTGCCGCTTTGGCTGGCAGAGGAGTGCAGAGGCTCTCTTTGGCAAGGTTGCTTTGCTCTCCTGCGTTTTTGCCA-CCTGGTCTTTAAAAACCTAAAAGCCTGTG--GTTTCTGGGGTGGCTCCCTTGGAGGGGCTGCAGTGGGCTGAGACCCGGCCTGCAGCCTGGGAGTTCTGTGCCGCTGTCTGGGAGGGCACCTGAAGATGTGGCTTTGGGGCCATGGGAGG-TCAGGGACAACATTTATGGGTGCAAGTTTTGGGGCTGGGTGTCGGG-GCCAGGGGTGCTGCTGCACTGAGGATGAGGTGCAGGGTGTGGT-----GCTGAGTGTCAGGGGCAGAGTTGCTGCAGTGCAGAGGACAGAGGTGGTGC----AGGGCAGGGTTCCTGGGCATCAAAAGGCAGGGGtgacagagcagaagcaccgtcatctcagacaaacaccgccactttaagttccagctccctttctagccccatgcatttcaaggaaatcacttaacttctaactacaagcagcagccagaaagagc-aggcagta----aaagctaagagagctcgggcacagagggaggtggagggaggggggaaagtctctcaagtaactgccaaacttcaccctcat-acaatgggccccagtaaaccagtgggccttaataatcacagtcctttcccttcagatgcactaagata--gggaagcta-aagcagactcgggagagg--ggaggtatgcctgcggctgaagcaagatgtatgggaacggacacacaactctccctcccagataagcacaacaaagagacataggagcagtgcaagcctctgataaactctcccaccctgaatccttaaaaacttttcgcatgtaggcaagtgcggcttctgacttaacttggacagaagtccctcccaggtttgaaataaacc------tgctaactgttgagccacccttcgtgtttctctcctctttaattcttacaACCCCTCCTTCTGAGATGGAGATGtttccagctggggaaactgaggctcagagagagttgac-taaGGGAAGGCAAGAAAGGGAGGCAGAGCCCCCTGCAGGCCCTCCTCACCCGAGGAACTGAGAGAAGCCAGGGCCA-GGGCCTG-----CCTTGCAACCCACTCTGCCTCCGCCTCCCCTTGTGGGACCTCAGGGGGTGGCCCCATTTCCCTTGTGTGGGCGAGGAGCTCCTTTTTGCTGCCTGATGTTTTGGATCCTGAGCCCACACCCAGGCAGGGCTGTCTCCTCTCCCTATAGTTGCTGAGGCCATCAGGCCCCAGGCTTC--ACCTCTGTTCTCTACTGGATGA--TCCTCTGGTCAGGTCCCTGGGTGTGCATGTGGAGGAAGGCGTGCATCTGTGTGCATGTGTGTCTACACGTGTGAACACAGGTGTATGCATGTGTGCACGTATGCAAGTGTACAG------GGGTGCACCCAGGTGAGGCTCCCCAGACCTTTTCCCCAGGAGAAGACCATATCTCC-CCCTGGTGTCAGGTGTCCACCCAAGCCCTCCAAGGGTGGGGATGGGGAGAAGGGAAAAGTGCCTGGGATGCCAGGCAGGAGTGCAGGCTCAGATGGGCCCTGAGGTGGTCACAGAGCTGAGCCAGGCATCCAGTCTGTGCAGCAGCCAAGATGTGGCCAGAGAGGTTCCTGGGAGGT-GGGGGTGGGGGG-TGCTATTCAGGCCCACCCCCTTCCCTCTTCATTCTCCTAGGGGACAGTCACGGGAGCTTGTTTGTTGCCAAAAGTCCCCCTCAGCCCCTCCCTACCTACAATGTCCCTTCCCTGGGCATAGGCCTGAGTGTGAAGACTGT--AGCTGCTAGCAACAGAAACGGGGCTTGTATGCACCCAAGGGAGCCAACTCCAGCTCTGTAAAGCCTGGCGGGGGTGGGTGGCAGGCAGCAGAGGGTCCAGTGGTTTAGGGTACCTCTCGTGGGCTGGCTGCCCACACCACCTACCCCTCAGCAGGCCGGCTCTGGACATAGTGGTTGGCCAAGTCCGAGCCAGCCCATCTTGGCAACTCCTCCTCCTGCCTGCCAGGGTGACTTCACTTTTTCAGATCTTCAGTGATGTGCAGATCACTGATTCAGCCCTGAGCTCAGCCAGGATGCAGGAGAAAGAGGAGGGGCTGGCCCCGGGGCACCCCAGGCCCAGCTTCCTGGGCCCTCCCATCCCATGGCCCCATGGGCTTCCCTTCCTCCATCTGTCTGTGGCTGGGCGCAGGCCAGACCTCAAGAGGCAGCTGGGGGATGTGGAAAGAACAGGGACTTTCCCCACAGAAGCCCAGAACCCA----CCACCTACCTCACCCCAGGAACCCCCTGACAGGTCCATGGCTTCCCCTTGTTAGAGGTAAATGTGATGCCCCTGGGCATCATTTCTTCGGGGGAAAACTGGATTCTCTGGGGCTCCATGCTGGCTCTCCTAGTCCCACACCCCGTGCTTTCCTGTGTAGAGGAGGGAAGGGCCCCCCCCCC--ACTCCCCCCATGAGGTGgaaagtagccaaattctcctgtag---atgtttactgcttctttgaataaatatagaaattgatcctcccagtcttaaagaaagttacatttgtctcactggagttggtttttccggtaaacctcccagagaacagtagggagttgaaacttaccagctcggggcctgacattgacaggcctgcccctcacccttctggactgcctcagccacctggtgcctgttgaccaacgcctctgcctcccgcctc------cctaattcttg-ttttc--caaaactggttaca-tttttcccAGGCCAGGCCTCCAGGACCCCCACCCTCTGCACTGCCCTGGATGCTGACAAAGGCTCTCCTGCCcccttccctgcccatatcttcc-cttcctctcacttcTAGCCCCACAGAGGCTGAGCTCCACCCAGCCTCTGCCTCAGGAGAAATGGCTGGGGATGCGCTCTGGTTGGGGGAGCCTGGAGC-TGGGGTAGGGATGGGCAGTTGGCGGGGAGGGTGGTGTTCTCAGAGTCCTC-GGGTCGCAACCCCAGCAGTCCCAGATCTTGCAT-CCTGCTCGGCTTCCCTGCTGTCTTTGTGCAGCAAAAAGGGCAAAGCACAGGGACTGC-AGGCAGGTGCACCTGGTGAAAGGAGGGGCTGTGCGTGCAAAGGTGAGCGGACCCAGGTTACTGGTGGCCTTC-CCAGCACCACGccctgctcccgcccgcgccctgctcctacctctgccggccggctttgctcttacccgcgccccgctcctgtggcgacccgctcctat-tcctgcctggcccgctccccgctcctgcccctgcccctgcccctgcctggcccccgccccgctcctgcccttgcACAGTCTGCACTCCTCTCCTACATGCCGCCTTGGTGCTGCCCCTGCCGGCTCCTCTCGCGCACAGCACTCGCCTGGCGGGCAGAGACCAGAGCAGGGCGTACAGCAGCTCGGATTGCCCAGGAGTCCCTGCCCAGAGGTG i panPan2.chrUn_NW_014017559v1 C 0 C 0 s gorGor5.CYUI01000356v1 11645 3484 + 152767 TCATTCCTCCTCCAGCTCTGCCGCTTTGGCTGGCAGAGGAGTGCAGAGGCTCTCTTTGGCAAGGTTGCTTTGCTCTCCTGCGTTTTTGCCA-CCTGGTCTTTAAAAACCTAAAAGCCTGTG--GTTTCTGGGGTGGCTCCCTTGGAGGGGCTGCAGTGGGCTGAGACCCAGCCTGCAGCCTGGGAGTTCTGTGCCGCTGTCTGGGAGGGCACCTGAAGATGTGGCTTTGGGGCCATGGGAGG-TCAGGGACAACACTTATGGGTGTAAGTTTTGGGGCTGGGTGTCAGG-GCCAGGGGTGCTGCTGCACTGAGGATGAGGTGCAGGGTGTGGT-----GTTGAGTGTCAGGGGCAGAGTTGCTGCAGTGCAGAGGACAGAGGTGGTGC----AGGGCGGGGTTCCTGGGCATCAAAAGGCAGGGGtgacagagcagaagcaccgtcatctcagacaaacaccgccactttaagttccagctccctttctagctccatgcatttcaaggaaatcacttaacttctaactacaagcagcagccagaaagagc-aggcagtaaaacaaagataagacagctcgggcacagagggaggtcgggggaggggggaaagtctctcaagtaactgccaaacttcaccctcat-acaatgggccccagtaaaccagtggaccttaataatcacagtcctttcccttcagatgcactaagata--gggaagcta-aagcagactcgggagagg--ggaggtatgcctgcggctgaagcaagatgtatgggaatggacacacaactctccctcccagataagcacaacaaagagacataggagcagtgcaagcctctgataaactctcccaccctgaatccttaaaaacttttagcatgtaggcgagtgtggtttctgacttaacttggacagaagtccctcccaggtttgaaataaacc------tgctgactgttgagccacccttcgtgtttctctcctctttaattcttacaACCCCTCCTTCTGAGATGGAGATGTTTCCAGCTGGGGAAACTGAGGGTCAGAGAGAGTCGACTTAAGGGAAGTCAAGAAAGGGAGGCAGAGCCCCCTGCAGGCCCTCCTTACCCGAGGAACTGAGAGAAGCCAGGGCCAGGGGCCTG-----CCTTGCAACCCACTCTGCCTCCACCTCTCCTTGTGGGACCTT--GGGGTGGCCCCATTTCCCTTGTGCGGGCGAGGAGCTCCTTTTTGCTGCCTGATATTTTGGATCCTGAGCCCACACCCAGGCAGGGCTGTCTCCTCT-CCTATAGTTGCTGAGGCCATCAGGCCCCAGGCTTC--ACCTCTGTTCTCTACTGGGTGA--TCCTCTGGTCAGGTCCCTGGGTGTGCATGTGGAGGAAGGTGTGCATCCGTGTGCATGTGTGTCCACACATGTGAACACAGGTGTATGCATGTGTGCACGTATGCAAGTGTACAG------GGGTGCACCCACGTGAGGCTCCCCAGACCTTTTCCCCAGGAGAAGACCATATCTCC-CCCTGGTGTCAGGTGTCCACTCAAGCCCTCCAAGGGTGGGGATGGGGAGAAGGGAAAAGTGCCTGGGATGCCAGGCAGGAGTGCAGGCTCAGATGGGCCCTGAGGTGGTCACAGAGCTGAGCCAGGCATCCAGTCTGTGCAGCAGCCAAGATGTGGCCAGAGAGGTTCCTGGGAGGTGGGGGGTGGGGGGGTGCTATTCAGGCCCACCCCCTTCCCTCTTCATTCTCCTAGGGGACAGTCACAGGAGCTTGTTTGTTGCCAAAAGTCCCCCTCAGCCCCTCCCTACCTACAATGTCCCTTCCCT-GGCATAGGCCTGTGTGTGAAGACTGTGTAGCTGCTAGCAACAGAAACGGGGCTTGTATGCACCCAAGGGAGACAACTCCAGCTCTGTAAAGCCTGGGGGGGGGGGGTGGCAGGCAGCAGAGGGTCCAGTGGTTTAGGGTACCTCTCGTGGGCTGGCTGCCCACACCACCTACCCCTCAGCAGACCGGCTCTGGACATAGTGGTTGGCCAAGTCCGAGCCAGCCCGTCTTGGCAACTCCTCCTCCTGCCTGCCAGGGTGACTTCACTTTTTCAGATCTGCAGTGATGTGCAGATCACGGATTCAGCCCTGAGCTCAGCCAGGATGCAGGAGAAAGAGGAGGGGCTGGCCCTGGGGCACCCCAGGCCCAGCTTCCTGGGCCCTCCCACCCCATGG-CCCATGGGCTTCCCTTCCTCCATCTGTCTGTGGCTGGGTGCAGGCCAGACCTCAAGAGGCAGCTGGGGGATGTGGAAAGAACAGGGACTTTCCCCACAGAAGCCCAGAACCCA----CCTCCTACCTCACCCCAGGACCCCCCTGACAGGTCCATGGCTTCCCCTTGTTAGAGGTGAATGTGATGCCTCTGGGCATCATTTCTTCGGGGGAAAACTGGATTCTCTGGGGCTCCATGCTGGCTCTCCTAGTCCCACA-CCCGTGCTTTCCTGTGTAGAGGA-GGAAGGGCCCCCCCC----ACTCCCCCCATGAGGTGgaaagtagccaaattctcctgtag---atgtttactgcttctttgaataaatgtagaaattgatcctcccagtcttaaagaaagttacatttgtctcactggagttggtttctccgg-aaacctcccagagaacagtagggagttgaaacttaccagctcggggcctgacattgacaggcctgcccctcacccctctggactgcctcagccacctggtgcttgttgaccaacgcctctgcctcccgcctc------cctaattcttgtctttc--caaacctggttaca-tttTGCCCAGGCCTGGCCTCCAGGACCCCCACCCTCTGCACTGCCCTGGATGCTGACAAAGGCTCTCCTGCCcccttccctgcccatatcttcc-cttcctctcgcttcTAGCCCCACAGAGGCTGAGCTCCACCGAGCCTCTGCTTCAGGAGAAATGGCTGGGGATGCGCTCTGGTGGGGGGAGCCTGGAGC-TGGGGTAGGGATGGGCGGTTGGCGGGGAGGGTGGTGTTCTCAGAGTCCTC-GGGTCGCAACCCCAGCAGTCCCAGATCTTGCAT-CCTGCACGGCTTCCCTGCTGTCTTTGTGCAGCAAAAAGGGCAAAGCACAGGGACTGC-AGGCAGGTGCATCTGGTGAAAGGAGGGGCTGTGCGTTCAAAGGTGAGCGGACCCAGGTTACTGGTGGCCTTC-CCAGCACCACGCCCTGCTCCCGCCCGCGCCCTGCTCCTACCTCTG-CGGCCGGCTTTGCTCTTACCCGCGCCCCGCTCCTGTGGCGACCCGCTCCTATACCCTGCCTGGCcccctccccgcccctgcccctgcccctgcccctgccTGGCCCCCG-CCCGCTCCTGCCCTTGCACAGTCCGCGCTCCTCTCCTACATGCCGCCTGCGTGCTGCCCCTGTCTGCTC--CTCGCGCACAGCGCTCGCCTGGCGGGCAGAGACCAGAGCAGGGCGTACAGCAGCTTAGATTGCCCAGGAGTCCCTGCCCAGAGGTG i gorGor5.CYUI01000356v1 C 0 C 0 s macFas5.chr6 5646828 3350 - 181584905 TCATTCCTCCTCCAGCTCTGCCGCTTTGGTTGGCAGAGGAGTGCAGGGGCTCTCTTTGGCAAGGTTGCTTTGCTCTCCTGCATTTCTGCCACCCTGGTCTTTAAAAACCTAAAAGCCTGTT--GTTTCTGGGGTGGCTCCCTTGGAGGGG-TGCAGTGGGCTGAGACCCAGCCTGTAGCCTGGGAGTTCTGTGCCACTGTCTGGCAGGGCACCTGAAGATGTAGCGTTGGGGCCATGGGAGGCTCAGGGCCAACACTTATGGGTGCAAGTTTTGGGCCTGGGTATCAGGAGCCAGCGG----GCTGCACTGAGAACTAGGTGCAGGGTGTGGCACAGAGTTGAGTGTCAGGGGCAGAGTTGCTGCAGTGCAGAGGACAGAGGTGGTGCGGGGGGGGGGGGGGTCCTGGGCATCAAACAGCAGGGGtgacagagcaggagaaccatcattt----caaacactgccactttaagttccagctccctttctagccccatgcatttcaaggaaatcacttcacttctaactacaagcagcagccagaaagagcaagacagtgaaacacagataagacagctcgggcacagagggaggt-------ggcggtaaagtctctcaagtaactgccaaacttcaccctcataacaatgggccccagtaaaccagtgggcct---taagcacagtcctttcccttcaggttcactaaaatatcgggaagctacaagcagactcaggggaagacggaagtatgcctgcagctgcagcaagatgtatgag--cgcacacacaactgtcccg-ccagataaacacagcaaagacacacacaggcagtgc-agcctctgataaactttcccaccctgaatccttaaaaactcttagcctgtaagggagtgcgggttctgacctaactttgtcattagtccctcccaggtttgaaataaacctgtacttgttgactgttgagcca-----------------------------------cCCTCCTTCTGAGATGGAGATGtttataacttgggaaactgaggctc--agagagTCGAC-TAAGGGAAGGCAAGAAAAGGAGGCAGAGCCCCCTGTAGGCCCTCCTCACCCAAGGAACTGAGAGAAGCCCGGACCA-GGGTCTG-----CCTTGCAACCCACTCTGCCTCCACCTCCCTTTGTGGGACCTC--GGGGTGGCCCCACTTCCCCTGTGCTGGT--TGAACTCCTTTTTGCTGCCTGATGTTTTGGATCCTGAGCCCACACCCAGGCAGGGCAGTCTCCTCTCCCTGTAGTTGCCAAGGCCAGCAGGCCCCAGGCTTCATACCTCTGTCCTCTACTGGGCCACCCCCTCTAGTCAAGTCCCTGGGTGTGCCCGTGGAATAAGGTGTGCATC----------TGTGTTCACACATGTGAACACAGGTATATGCCTATGTGCATGTATGCAAGTGCACAGGGGGGCGGGGGCACCCACTTGAGGCTCCTCAGATCTTTTCCCCAGGAGAAAACCATATCCCCACCCTGGTGTCAGCTGTCCACTCAAGCCCCCCAAGGGTGGGGATGGGGAGAAAGGAAAAGTGCCTGGGATGCCAGGCAGGAGTGCAGGCTCAGATGGGCCCTGAGGTGGTCAGAGAGCTGAGCCAGGCATCCAGTCTGTCCAGCAGCAAAGATGTGGCCAGAGTGGTTCCCAGGAGGT-------GGAGGGGTGCTATCCAGGCCCACCCCCTTCCCTCTTCATTCTCCT--GGGACAGTCACGGGAGCTTGTTTGTTGCTCAAAGTTCCCCTCAGCCCCTCCCTAACTACAATGTCCCTTCCCTGGGCATAGGCCCGAGTGTGAAGCCTGTGTAGCTGCTAGGAATAGAAACGGGGCTCGTATGCACTCAAGGGAGCCAACTCCAGCTCTGTAAAGCCTGGCGGGGGTGGGTGGCAGGCAGCAGAACGTCCCGTGGTTTAGGGTACCTCCCCTGGGCTGGCTGCCCACACCATCTATCCCCCAGCAGGACAGCTCTGGACATAGCAGTTGCCCAAGTCCAAGCCAGCCCATCTTGGCAACTCCTCC-CCTGCCTGCCAGGGTGACT--ATTTTTTGAGGTCTGCCGTGATGCACAGATCACTGATTCAGTCGTGAGCTCACCCAGGACACAAGAGAAACAGGAGGGGCTGGCCCCCGGGCACCCCAGGCCCAGCATCCTGGGCCCTCCCACCCCATGGC--------CTTCCCTTTCTCCATCTCTCCGTGGCTGGGTGCAGGGCAGACCTCAAGAGGCAGCTGGGGGATGCGGAAAAAACAGGGACTTTCCCCACGGAAGCCCAGAACCCACACCCACCCAACCTCACCCCAGGGACCCCAGCACAGGTC---GGCTTCCCCTTGTTAGAGGTAAATGTCATCC---TGGGCATCATGTCTCTGGGGGAAAAC--GATTCTCTGGGGCGCCATGCTGGCTCTGCTAGTCCCACA----------TCCTGTGTAGAG---AGAAGGGCACTCCCTCCAAACTCCCCCCAGGAGGCGgaaagcagccaaattctcctatagaatatgtttactgtttctttgaatgaatgtggaaattgctcgtcccagtttt----aaagttacatt----tcaatggagttggtttctcagg-aaacctcccaaacaacagcaggaaattcaagcttaccagctcggggcctgatagtg--agcccttccccttacccctccggactgccttagccacctggtgcttgttgaccaatgcctcgacctcccgcctcccgcctcccgcctcccgcctccccacaaacctggttacattttttcccAGGCCAGGCCTCCAGGACCCCCACCCTCTGCACTGCCCTGGATGCTGACAAACGCCCCCCAGACCCC------------AGCTTCTACTTCCTCCCGCCTCTGGCCC--CAGAGGCTGAGCTCCACCGAGCCTCTGCCTCAGGAAAAACGGCCAGGG-TGCGCTCTGGTTGGGGGAGCCTGGAGCATGGGGTAGGCATGGGGGGTTGGCGGGGAGTGTTGTACTC-AAGAGTTCTCTGGGTCGCAACTCCAGCAGTGCCAGACCTTGCGTCCCTGCACGGCTCCCCTGCTGTCTTTGTGCAGCAAAAAGGGCAAAGCACAGGGACTGCAAGGCAGGTGCACCTGGTTAAAGGCGGCGCTGTGCGTGCACAGGTGAGTAGACCCAGGCTACTGGTAGCCTTCACCAGCACCACA-CCTGCTCCCA-------------CCTATCTCTGCCTGACAGCTTTGCTCCTACCCGCGC----------------CCTGCTCTTAC-CCCTGTACGGTCCG---------------------------------TGGCCCACGCCCCACTCCTGCCCCTGTCCCGCCCGCACTCCTCTCCTCCATACCACCTGCGTGCTGCCCCTGCCCACTCCTGTCGCCCAGGGCACTCACCCGGCAGGCAGAGATCAGAGCAAGGCATACAGCAGCTCATATTGCCCAGGAGTTCTTGCCCAGAGATG i macFas5.chr6 C 0 I 1588 e nomLeu3.chr2 160274957 28129 - 163208435 I a score=114846.000000 s hg38.chr5_KI270795v1_alt 83384 129 + 131892 CCATGCCCACAGTGTCCCTCGGGTCCACCAAGCCCTGGGCAGGCATGGGGCGACCGGGCTGAGCGCCGCACCCCGCCCCGCAGAGCCGCCGGTCAGAACCACCGTCCTTTCTGC-GCGACCCCGGTGCGC s panTro5.chr5_NW_015973214v1_random 43401 130 + 125477 CCATGCCCACAGTGTCCCTCGGGTCCACCAAGCCCTGGGCAGGCATGGGGCGACCGGGCTGAGCGCCGCACCCCGCCCCGGAGAGCCGCCGGTCAGAACCACCGTCCTTTCTGCAGCGACCCCGGTGCGC i panTro5.chr5_NW_015973214v1_random C 0 C 0 s panPan2.chrUn_NW_014017559v1 20070 130 - 95236 CCATGCCCACAGTGTCCCTCGGGTCCACCAAGCCCTGGGCAGGCATGGGGCGACCGGGCTGAGCGCCGCACCCCGCCCCGGAGAGCCGCCGGTCAGAACCACCGTCCTTTCTGCAGCGACCCCGGTGCGC i panPan2.chrUn_NW_014017559v1 C 0 C 0 s gorGor5.CYUI01000356v1 15129 130 + 152767 CCATGCCCACAGTGTCCCTCGGGTCCACCAAGCCCTGGGCAGGCATGGGGCGACCGGGCTGAGCGCCGCACCCCGCCCCGCAGAGCCGCCGGTCAGAACCACCGTCCTTTCTGCAGCGACCCCGGTGCGC i gorGor5.CYUI01000356v1 C 0 C 0 s macFas5.chr6 5651766 129 - 181584905 cCTTGACCACAGTGTCCCTCGGGTCCACCAAGCCCTGGGCAGGCATGGGGTGA-CGGGCTGAACGCCGCACCCCGCCCCGGAGAGCCGCCGGCCAGAGCCATCGTCCTTTCTGCAGCGACACTGGTGGGC i macFas5.chr6 I 1588 N 0 e nomLeu3.chr2 160274957 28129 - 163208435 I a score=663647.000000 s hg38.chr5_KI270795v1_alt 83513 1260 + 131892 AGGGGCGAAGGAGACATCCGGTGCTGCTGCCGCTGCTCGGCAAAAGTGAAAGTCCCGCCGGCTGAGGGTGCCCTCACGGGCCAGCGCGAAGGTGGCCCCGTGCGCACAGCGCCCTGATAATTGCTTTTTTTCTTGTGATGGGCATCGGGCTGAGCGTCGCAGGCCACCCGGCCTCAGCTTGGAGAGCATTGGCATGGCAGGTCTGCAGGAGCAGGCGCCGGCCTGGCAGCGGGCTTGGTGCCCAGAACCCAGCCACAGCCGGAGGTCCCAGTGTGGCTGCCCCTCCCGCCAAAGCCGCCTCCCGAAGTAAACAGGACAGCCCTTTCTGAGCAAGCATGAGCAGAGGGCCGGGGAGCCCAGAAGTCGCCACTGTCCTGGGCCTGCTGTTTCTGCAGCAGATGGCCCAGTCCTGAGTTCCCTTCTGCGCTCTACCTCCCTCATTCCTCCTCCAGCTCTGCTGCTGGAGTGGAGCGGTCTCTTAGGCAAGGCTACTTTGCTCTCCTGCATTTTTGCCACTCTGGTCTTTAAACATCTAAAAGCCTGTCGTTTCTGGGGTGGAACCCTTGGTGAGGCTGCCGTGGGCCTCAACCCACCGGGCAGCCTGGGAGTTACGTGCTGCTGCGGACAGAGCACCTAAAGATGCGGCCTTCAGGGCCATGGGAGGCTCAGGGCCAACACTTACCGGTGCGGGTTTTGGGACTGGGTGTCAGAGGACAGGGGTGCTGCTGTGCTGAGGAC--AGGTGGGGCAGGGCGGGTGGCCCGGGCATCAAAAGGCATGGATGGTGCTGTGCTGAGGGCGGGGTTCAGGGTGGCGGGGCTGGGATTCAGGGCAGGGGTGCTGCTGTGCTGAGGAC-AGCGG-----------------------------------------------------------------------------GTGCAGGGCCGGGGGCTCGTTTTCAGGGGTCAGGGTGGGGGAATGGGTGTCGGGGCAGGGGTGCTGCTTTGCTGAGGACAGGGTGCAGGGTGGGGGGCTTGGTTTCATGATACAGGGGTGCTGTTGTGCTGAGGACGGGGTGAATGTTGACGGGCTGAAGGTCCAGGTACA-GGGGTACCACTGCGCTGAGGACAGGGAGTGCCGCGTGGGGCCTGGGTGCCAGGGTTTGGGGTGCAAATATAGTGAGGTCAGGATGCATTGGGGAGAGTGCCGCAGGGACCTCGGGAGCTGTCACATGGCAGGGAGAGGCCGCAGTCAACACCCTGTGTCATGATTTCTTCCCCACCTGTGTGTGGCCAGGCGCAGGGGACTAGACAGTGGCTGCCAAACAGGGAGTGCAC s panTro5.chr5_NW_015973214v1_random 43531 1245 + 125477 AGGGGCGAAGGAGACATCTGGTGCTGCTGCCGCTGCTCGGCAAAGGTGAAAGTCCCGCCAGCTGAGGGTGCCCGCACCGGCCAGCGCGAAGGTGGCCCCGTGCACACAGCGCCCTGATAAGCGCTTTTCTTCTTGTGATGGGCAGCGGGCTGAGCGTCGCAGGCCACCCGGCCTCAGCTTGGAGAGCATTGGCATGGCAGGTCTGCAGGAGCAGGCGCCGGCCTGGCAGCAGGCTTGGTGCCCAGAACCCAGCCACAGCCGGAGGTCCCAGTGTGGCTGCCCCTCCCGCCAAAGCCACCTCCCAAAGTAAACAGGACAGCCCTTTCTGAGCAAGCATGAGCAGAGGGCCGGGGAGCCCAGAAGTCGCCACTGTCCTGGGCCTGCTGTTTCTGCAGCAGATGGCCCAGTCCTGAGTTCCCTTCTGCGCTCTACCTCCCTCATTCCTCCTCCAGCTCTGCTGCTGGAGTGGAGCGGTCTCTTAGGCAAGGCTCCTTTGCTCTCCTGCGTTTTTGCCACTCTGGTCTTTAAACATCTAAAAGCCTGTCGTTTCTGGGGTGGAGCCCTTGGTGAGGCTGCCGTGGGCCTCAACCCACCGGGCAGCCTGGGAGTTACGTGCTGCTGGGGACAGAGCACCTGAAGATGCGG-CTTCAGGGCCATGGGAGGTTCAGGGCCAACACTTACGGGGGCAGGTTTTGGGACTGGGTGTCAGAGGACAGGGGTGCTGCTGTGCTGAGGAC--GGGTGGGGTAGGGCGGGTGGCCCGGGCATCAAAAGGCATCAA------------AAGGACGGGGTTCAGGGTGGCGGGGCTGGGATTCAGGGCAGGGGTGCTGCTGTGCTGAGGAC-AGTGG-----------------------------------------------------------------------------GTGCAGGGCCGGGGGCTCGTTTTCAGGGGTCAGGGTGGGGGAATGGGTGTCGGGGCAGGGGTGCTGCTTTGCTGAGAACAGGGTGCAGGGTGGGGGGCTTGGTTTCGTGAGACAGGGGTGCTGCTGTGCTGAGGACGGGGTGAAGGTTGACGGGCTGCGGGTCCAGGGACA-GGGGTACCGCTGCGCTGAGGACAGGGAGTGCCGCGTGGGGCTTGGGTGCCAGGGTTTGGGGTGCAAATATAGTGAGGTCAGGATGCATTGGGGAGAGTGCCTCAGGGACCTCAGGAGCTGTCACATGGCAGGGAGAGGCCGCAGTCAACACCCTGTGTCATGATTTCTTCCCCAC--GTGTATGGCCAGGCGTAGGGGACTAGACAGTGGCTGCCAAACAGGGAGTGCAC i panTro5.chr5_NW_015973214v1_random C 0 C 0 s panPan2.chrUn_NW_014017559v1 20200 1243 - 95236 AAGGGCGAAGGAGACATCTGGTGCTGCTGCCGCTGCTCGGCAAAGGTGAAAGTCCCGCCAGCTGAGGGTGGCCGCACCGGCCAGCGCGAAGGTGGCCCCGTGCACACAGCGCCCTGATAAGCGCTTTTCTTCTTGTGATGGGCAGCGGGCTGAGCGTCGCAGGCCACCCGGCCTCAGCTTGGAGAGCATTGGCATGGCAGGTCTGCAGGAGCAGGCACCGGCCTGGCAGCAGGCTTGGTGCCCAGAACCCAGCCACAGCCGGAGGTCCCAGTGTGGCTGCCCCTCCCGCCAAAGCCACCTCCCAAAGTAAACAGGACAGCCCTTTCTGAGCAAGCATGAGCAGAGGGCCGGGGAGCCCAGAAGTCGCCACTGTCCTGGGCCTGCTGTTTCTGCAGCAGATGGCCCAGTCCTGAGTTCCCTTCTGCGCTCTACCTCCCTCATTCCTCCTCCAGCTCTGCTGCTGGAGTGGAGCGGTCTCTTAGGCAAGGCTCCTTTGCTCTCCTGCGTTTTTGCCACTCTGGTCTTTAAACATCTAAAAGCCTGTCGTTTCTGGGGTGGAGCCCTTGGTGAGGCTGCCGTGGGCCTCAACCCACCGGGCAGCCTGGGAGTTACGTGCTGCTGGGGACAGAGCACCTGAAGATGCGG-CTTCAGGGCCATGGGAGGTTCAGGGCCAACACTTACGGGGGCAGGTTTTGGGACTGGGTGTCAGAGGACAGGGGTGCTGCTGTGCTGAGGAC--GGGTGGGGTAGGGCGGGTGGCCCGGGCATCAAAAGGCATCAA------------AAGGACGGGGTTCAGGGTGGCGGGGCTGGGATTCAGGGCAGGGGTGCTGCTGTGCTGAGGACGAGCGG-----------------------------------------------------------------------------GTGCGAGGC--GGGGCTCGTTTTCAGGGGTCAGGGTGGGGGAATGGGTGTCGGGGCAGGGGTGCTGCTTTGCTGAGAACAGGGTGCA-GGTGGGGGGCTTGGTTTCGTGAGACAGGGGTGCTGCTGTGCTGAGGACGGGGTGAAGGTTGACGGGCTGCGGGTCCAGGGACA-GGGGTACCGCTGCGCTGAGGACAGGGAGTGCCGCGTGGGGCTTGGGTGCCAGGGTTTGGGGTGCAAATATAGTGAGGTCAGGATGCATTGGGGAGAGTGCCTCAGGGACCTCAGGAGCTGTCACATGGCAGGGAGAGGCCGCAGTCAACACCCTGTGTCATGATTTCTTCCCCAC--GTGTGTGGCCAGGCGTAGGGGACTAGACAGTGGCTGCCAAACAGGGAGTGCAC i panPan2.chrUn_NW_014017559v1 C 0 M 118 s gorGor5.CYUI01000356v1 15259 1336 + 152767 AGGGGCGAAGGAGACATCCGGTGCTGCTGCCGCTGCTCGGCAAAGGTGAAAGTCCCGCCGGCTGAGGGTGCCCGCACCAGCCAGCGCGAAGGTGGCCCCATGCACACAGCACCCTGATAAGCGCTT---TTCTTGTGATGGGCAGCGGGCTGAGCGTCGCAGGCCACCCGGCCTCAGCTTGGAGAGCACTGGCATGGCAGGTCTGCAGGAGCAGGCGCCGGCCTGGCAGCGGGCTTGGTGCCCAGAACCCAGCCACAGCCGGAGGTCCCAGTGTGGCTGCTCCTCCCGCCAAAGCCGCCTCCCGAAGTAAACAGGACAGCCCTTTCTGAGCAAGCATGAGCAGAGGGCCGGGGAGCCCAGAAGTCGCCACTGTCTTGGGCCTGCTGTTTCTGCAGCAGATGGCCCAGTCCTGAGTTCCCTTCTGCGCTCTACCTCCCTCATTCCTTCTCCAGCTCTGCTGTTGGAGTGGAGCGGTCTCTTAGGCAAGGTTACTTTGCTCTCCTGCATTTTTGCCACTCTGGTCTTTAAATATCTAAAAGCCTGTCGTTTCTGGGGTGGAGCCCTTGGTGAGGCTGCCGTGGGCCTCAACCTACAGGGCAGCCTGGGAGTTACGTGCTGCTGCAGACAGAGCACCTGAAGATGCGGTCTTCAGGGCCATGGGAGGCTCAGGGCCAACACTTACAGGTGCAGGTTTTGGGACTGGGTGTCAGAGGACA-GGGTGCTGCTGTGCTGAGGACAGGGGTGGGGCAGGGCGGGTGGCCCGGGCATCAAAAGGCATGGATGGTGCTGTGCTGAGGATGGGGTTCAGGGTGGCGGGGCTGGGATTCAGGGCAGGGGTGCTGCTGTGCTGAGGAC-AGCGGGTGCGGGGGGGGCTCATTTCAGGGGTCAGGGTGGGGGAATGGGTGTCGGGGCAGGGGTGCTGCTTTGCTGAAACAGAGTGCAGGGCCGGGGGCTCGTTTtcaggggtcagggtgggggaatgggtgtcggggcaggggtGCTGCTTTGCTGAGAACAGGGTGCAGGGTGGGGGGCTTGGTTTCGTGAGACAGGGGTGCTGCTGTGCTGAGGACGGGGTGAATGTTGACGGGCTGAAGGTCCAGGGACAGGGGGTACCGCTGTGCTGAGGACAGGGAGTGCCGCGTGGGGCCTGGGTGCCAGGGTTTGGGGTGCAAATATAGTGAGGTCAGGATGCGTTGAGGAGAGTGCCGCAGGGACCTCAGGAGCTGTCACATGGCAGGGAGAGGCCGCAGTCAACACCCTGTGTTATGATTTCTTCCCCACATGTGTGTGGCCAGGTGCAGGGGACCAGACAGTGGCTGCCAAACAGGGAGTGTAC i gorGor5.CYUI01000356v1 C 0 C 0 e nomLeu3.chr2 160274957 28129 - 163208435 I a score=12352.000000 s hg38.chr5_KI270795v1_alt 84773 48 + 131892 CCCGGCGGTGGCTGTAGGGGACCACGACAGTGGGGCCACCTCTCCCTG s panTro5.chr5_NW_015973214v1_random 44776 48 + 125477 CCCGGCGGTGGCTGTAGGGGACCACGGCAGTGGGGCCATCTCTCCCTG i panTro5.chr5_NW_015973214v1_random C 0 C 0 s gorGor5.CYUI01000356v1 16595 47 + 152767 CCCAGCGGTGGCTGTAGGGGACCACG-CAGTGGGGCCATCTCTCCCTG i gorGor5.CYUI01000356v1 C 0 C 0 e nomLeu3.chr2 160274957 28129 - 163208435 I e panPan2.chrUn_NW_014017559v1 21443 118 - 95236 M a score=224963.000000 s hg38.chr5_KI270795v1_alt 84821 379 + 131892 CGTGTCTGCACCTGGGCCTGCCAGGGCTGTCTGCCATGCTCCATGGGGTGGGGGTCTTCGGCCCCTGGGAGGCTGCCGGTCGGTGTGACTTGGAGAGGTTGTGGTCAGGGGTCCCCTGGGGGCTGTGATGCAGTAACTAACTGCACCCTTTGGGGCTGGGAGGGGTGAGAAGGTTCTAGGCCTCCCAGAGCCCACCTGGCTCCTCCATCAGAAAGGCAGCCAGGCTTGGGGTTGAGGAGGTGATGCTGTGCCCCCTGAGGCAGGCTCCACTTTCCCCAGGGGACCTTG------------------------------------------------------------------------------------------GCTCTAGGGTGAGGCCCAGGCCTGGGAATGGCTCTGAGATCATCCCTGGGCCTCCGTGGAGCTCTGGCGTCACGGCTGTGTGGTTGTGGGG s panTro5.chr5_NW_015973214v1_random 44824 465 + 125477 CGTGTCTGCACCTGGGCCTGCCAGGGCTGTCTTCCATGCTCCATGGGGTGGGAGTCTTCGGCCCCTTGGAGGCTGCCGGTCAGTGTGACTCGGAGAGGTTGCGGTCAGGGGTCCCCTGGGGGCTGTGATGCAG----TAACTGCACCCTTTGGGGCTGGGAGGGGTGAGAAGGTTCTAGGCCTCCCAGAGCCCACCTGGCTCCTCCATCAGGAAGGCAGCCAGGCTTGGGGTTGGGGAGGTGATGCTGTGCCCCCTGAGGCAGGCTCCACTTTCCCCAGGGGACCTTGGAGGATAGGCCCTCTCCTGACCCAGGCTCAAGGACACTTGGCAGCCCCTGTGGTCCTGCCCTTTCTCCCAGCCTTGGCCTCCCTCCCGGAGCTCTAGGGTGAGGCCCAGGCCTGGGAATGGCTCTGAGATCATCCCTGGGCCTCCGTGGAGCTCTGGCGTCACGGCTGTGTGGTTGTGGGG i panTro5.chr5_NW_015973214v1_random C 0 N 0 s panPan2.chrUn_NW_014017559v1 21561 465 - 95236 CGTGTCTGCACCTGGGCCTGCCAGGGCTGTCTTCCATGCTCCATGGGGTGGGAGTCTTCGGCCCCTTGGAGGCTGCCGGTCAGTGTGACTCGGAGAGGTTGCGGTCAGGGGTCCCCTGGGGGCTGTGATGCAG----TAACTGCACCCTTTGGGGCTGGGAGGGGTGAGAAGGTTCTAGGCCTCCCAGAGCCCACCTGGCTCCTCCATCAGGAAGGCAGCCAGGCTTGGGGTTGAGGAGGTGATGCTGTGCCCCCTGAGGCAGGCTCCACTTTCCCCAGGGGACCTTGGAGGATAGGCCCTCTCCTGACCCAGGCTCAAGGACACTTGGCAGCCCCTGTGGTCCTGCCCTTTCTCCCAGCCTTGGCCTCCCTCCCGGAGCTCTAGGGTGAGGCCCAGGCCTGGGAATGGCTCTGAGATCATCCCTGGGCCTCCGTGGAGCTCTGGCGTCACGGCTGTGTGGTTGTGGGG i panPan2.chrUn_NW_014017559v1 M 118 N 0 s gorGor5.CYUI01000356v1 16642 464 + 152767 CGTGTCTGCACCTGGGCCTGCCAGGGCTGTCTGCCATGCTCCATGGGGTGGGGGTCTTCGGCCCCT-GGAGGCTGCCGGTCAGTGTGACTCGGAGAGGTTGCAGCCAGGGGTCCCTTGGGGGCTGTAATGCAG----TAACTGCACCCTTTGGGGCTGGGAGGGGTGAGAAGGTTCTAGGCCTCCCAGAGCCCACCTGGCTCCTCCATCAGAAAGGCAGCCAGGCTTGGGGTTGAGGAGGTGATGCTGTGCCCTCTGAGGCAGGCTCCACTTTCCCCAGGGGACCTTGGAGGATAGGCCCTCTCCTGACCCAGGCTCAAGGACACTTGGCAGCCCCTGTGGTCCTGCCCTTTCTCCCAGCCTTGGCCTCCCTCCCGGAGCTCTAGGGTGAGGCCCAGGCCTGGGAATGGCTCTGAGATCATCCCTGGGCCTCCGTGGAGCTCTGGCCTCACGGCTGTGTGATTGTGGGG i gorGor5.CYUI01000356v1 C 0 I 47764 e nomLeu3.chr2 160274957 28129 - 163208435 I a score=0.000000 s hg38.chr5_KI270795v1_alt 85200 3 + 131892 ACT e nomLeu3.chr2 160274957 28129 - 163208435 I e gorGor5.CYUI01000356v1 17106 47764 + 152767 I a score=25801.000000 s hg38.chr5_KI270795v1_alt 85203 98 + 131892 TCCCCACACAGTATGTTCTTGCCTTGCATCCACTCAGACAGAGAGCTTACATTTTTATACTTGTTTATCATTGTGAGTTTTGAATAAATTTTTATAAC s panTro5.chr5 1825210 98 - 181907262 TCCCCACACAATATGTTCTTGCCTTGCTTCAACTCAGACATAGAGCTTACATttttatacttgtttatcattgtgagttttgaataaatttttataat i panTro5.chr5 N 0 C 0 s panPan2.chr5 1777596 98 - 183735486 TCCCCACACAATATGTTCTTGCCTTGCTTCAACTCAGACATAGAGCTTACATttttatacttgtttatcattgtgagttttgaataaatttttataat i panPan2.chr5 N 0 C 0 e nomLeu3.chr2 160274957 28129 - 163208435 I e gorGor5.CYUI01000356v1 17106 47764 + 152767 I a score=223525.000000 s hg38.chr5_KI270795v1_alt 85301 466 + 131892 TTT-GTTTCAATTAATCTTTACTATCTTCAGCTAGACTTAATCAAAAATTAAATCAATTCTTTATTATTAAAATTCATAGGACTAAAAAAGTATAAAAATTGAACTAATTAAACCTTCAAAGAATATTTTTATATATTTGCAATATTTTTGCTTCTAAAATCAATAAAAG-TAAAGTGCATGAGAAATTTTGGAATATTCAGcatac------------acacacacacacatatacacacaTA-TCTGTGACAAATCAATTCAGTATTTTCAAATAGAAGAAACAAGCCtttcttttagttcagaagctttattttagtatttcttataaggtaggagtgctggcagcaaattttctgtctttgtttattggggaatatctttatttttaaaggatagatttgccggacacggcatttttagttgacaa-ttttttttctttca-ttctttgactatgccatcccattgccttcccaccatt s panTro5.chr5 1825308 469 - 181907262 ttttgcttcaattaatctttactgtcttcagctagacttaatcaaaaattaaaTCAATTCTTTATAATTAAAATTCATAGGACTAAAAAAGTATAAAA-TTGAACTAA----ACCTTCGAAGAATATTTTTATATATTTGCAATATTTTTGCTTCTAAAATCAATAAAAGTTAAAGTGCATGAGAAATTTTGGAATATTCGGcatacacacacacacatacacacacacacatatacacacatacCCTGTGACAAATCAATTCAGTATTTTCAAATAGAAGAATCAAGCCtttctttcagttcagaagctttcttttagtgt---ttatgaggtaggatggctggcagcaaattttctgtctttatct----gggaatatctttatttttaaaagatagatttgctggacatggcatttttagttgacaa-ttttttttctttca-ttctttgactatgccgtcccattgccttcCCAtcatt i panTro5.chr5 C 0 I 580 s panPan2.chr5 1777694 469 - 183735486 ttttgcttcaattgatctttactgtcttcagctagacttaatcaaaaattaaaTCAATTCTTTATAATTAAAATTCATAGGACTAAAAAAGTATAAAA-TTGAACTAA----ACCTTCGAAGAATATTTTTATATATTTGCAATATTTTTGCTTCTAAAATCAATAAAAGTTAAAGTGCATGAGAAATTTTGGAATATTCGGcatacacacacacacatacacacacacacatatacacacatacCCTGTGACAAATCAATTCAGTATTTTCAAATAGAAGAATCAAGCCtttctttcagttcagaagctttcttttagtgt---ttatgaggtaggatggctggcagcaaattttctgtctttatct----gggaatatctttatttttaaaagatagatttgctggacatggcatttttagttgacaa-ttttttttctttca-ttctttgactatgccgtcccattgccttcccatcatt i panPan2.chr5 C 0 C 0 s nomLeu3.chr2 160303086 467 - 163208435 -TTTGTTTCAATTAATCTTTACTATCTTCAGCTAGACTTCATCAAAAATTAAATCAATTCTTTATTATTAAAATTCATAGGACTAAAAAAGTACAAAAATTGAACTAATTAAACCTTCAAAGAATATTTTTATATACTTGCAATATTTTTGCTTCTAAAATCAATAAAAGTTAAAATGCATGAGAAATTTTGGAATATTCGGcat--------------acacacacacacatatacacacata-cCTGTGACAAATCAATTCAGTATTTTCAAATAGAAGAATCAAGCCtttcttttagttcagaagttttattttagtatttcttataaagtaggagtgctggcagcaaattttctgtctttgtttattggggaatatctttatttttaaaggatagatttgctggacatggcatttttagtggacaatttttttttctttcatttttttgactatgccatcccattgccttcccaccatt i nomLeu3.chr2 I 28129 C 0 e gorGor5.CYUI01000356v1 17106 47764 + 152767 I a score=-946.000000 s hg38.chr5_KI270795v1_alt 85767 21 + 131892 gtttctttc-ttcttcttct-------------------------------------------tc s panPan2.chr5 1778163 65 - 183735486 cattcattcattctttttctttctttctttctttctttctctttctctctctctctctttctctc i panPan2.chr5 C 0 C 0 s nomLeu3.chr2 160303553 20 - 163208435 gtttctttc-ttcttcttct-------------------------------------------t- i nomLeu3.chr2 C 0 C 0 e gorGor5.CYUI01000356v1 17106 47764 + 152767 I e panTro5.chr5 1825777 580 - 181907262 I a score=61902.000000 s hg38.chr5_KI270795v1_alt 85788 121 + 131892 tttttttttttttgagacggagtctccctctgtttgttgcccaggctggagtgcagtggtgtgatctcagcccactgcaacctctgcctcccaggttcaagcgattctccagccttagcct s panPan2.chr5 1778228 121 - 183735486 tttctctctttttgagacagaatctccctctgtttgttgcccaggctggagtgcagtggtgtgatctcagcccactgcaaactctgcctcccaggttcaagcgattctctggccttagcct i panPan2.chr5 C 0 I 366 s gorGor5.CYUI01000356v1 64870 121 + 152767 tttttttttttttgagacggagtctccctctgtttgttgcccaggctggagtgcagtggtgtgatctcagcccactgcaacctctgcctcccaggttgaagcgattctccagccttagcct i gorGor5.CYUI01000356v1 I 47764 C 0 s nomLeu3.chr2 160303573 113 - 163208435 --------tttttgagatggagtctccctctgtttgttgcccaggctggagtgcagtggtgtgatctcagcccactgcaacctctgcctcgcaggttcaagcgattctccagccttagcct i nomLeu3.chr2 C 0 C 0 e panTro5.chr5 1825777 580 - 181907262 I a score=11104.000000 s hg38.chr5_KI270795v1_alt 85909 40 + 131892 ccgaggagctgatattacaggcacgcacaaacatgcccag s gorGor5.CYUI01000356v1 64991 40 + 152767 ccgaggagctgatattacaggcacgcacaaacatgcccag i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160303686 40 - 163208435 ccgaggagctgatattaccggcacgcacaaacatgcccag i nomLeu3.chr2 C 0 C 0 e panPan2.chr5 1778349 366 - 183735486 I e panTro5.chr5 1825777 580 - 181907262 I a score=7206.000000 s hg38.chr5_KI270795v1_alt 85949 13 + 131892 ctaatttttgtat s panTro5.chr5 1826357 13 - 181907262 ctaatttttgtat i panTro5.chr5 I 580 C 0 s gorGor5.CYUI01000356v1 65031 13 + 152767 ctaatttttgtat i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160303726 13 - 163208435 ctaatttttgtat i nomLeu3.chr2 C 0 C 0 e panPan2.chr5 1778349 366 - 183735486 I a score=468478.000000 s hg38.chr5_KI270795v1_alt 85962 560 + 131892 ttttagtagagacagggtttcatcatgttggccaggctagtctcgaactcctgacctcaggtaatccacctgccttggcctcacaaagtgctgggattacaagcgtgagccaccgtgcctggcttcaccattgtttctgatcagaaatcagtggctaattttatcgtggtgctcttgtacatgaagagaagtttttgtcttactgttttcaatatttactctttgtcttttcatagcttgacaca-ggtgtgtaggagtggatatcttgatttttattttactaaaagtaaacattgattctatagattaatgttttatatcaaatttggtaagttttcagccattatttctgtaaatagtt----gtttcccctcttctttctttctgagactctcattctacatatattgtgcttgatgtttcataagtcatttttctttttctttttttttttttgagacagagtttcgctcttgttgcccaggctggagtgcaatggcacgatcttggctcactgcaacctctgcctcccaggttcaagcgattctcttgcctcagcctcc s panTro5.chr5 1826370 561 - 181907262 ttttagtagagatggggtttcaccatgttggccaagctggtctcgaactcctgacctcaggtattccacctgccttggcctctcgaagtgctgggattataggcgtgagctgccgTTCAtggtctcatcattgtttctgatcagaaatcagtggctaattttatcgtggtgctcttgtacatgaggagaagtttttgtcttactgttttcaatatttgctctttgtgttttcgtagcttgacacaaggcgtgtaggagtggatatattggtatttattttactgaaagtaaacattgattctatagattaatgttttatatcaaatttggtaagttttcagccattatttctgtaaatagttttttctttccccttttctttctttctgagactctcattctacatatgttgtgcttgacgtttcataagtcATttttctttttcttttttgtt----gagacagagtttcactcttgttgcccaggctggagtgcaatggcgtgatctcggctcactgcaacctctgcctcccaggttcaagcgattctcctgcctcagtctcc i panTro5.chr5 C 0 I 32 s panPan2.chr5 1778715 561 - 183735486 ttttagtagagatggggtttcaccatgttggccaagctggtctcgaactcctgacctcaggtattccacctgccttggcctctcgaagtgctgggattataggcgtgagctgccgttcatggtctcaccattgtttctgatcagaaatcagtggctaattttatcgtggtgctcttgtacatgaggagaagtttttgtcttactgttttcaatatttgctctttgtgttttcgtagcttgacacaaggtgtgtaggagtggatatattggtatttattttactgaaagtaaacattgattctatagattaatgttttatatcaaatttggtaagttttcagccattatttctgtaaatagttctttctttccccttttctttctttctgagactctcattctacatatgttgtgcttgacgtttcataagtcATttttctttttcttttttgtt----gagacagagtttcactcttgttgcccaggctggagtgcaatggcgtgatctcggctcactgcaacctctgcctcccaggttcaagcgattctcctgcctcagtctcc i panPan2.chr5 I 366 I 32 s gorGor5.CYUI01000356v1 65044 564 + 152767 ttttagtagagacagggtttcatcatgttggccaggctagtctcgaactcctgacctcaggtaatccacctgccttggcctcacagagtgctgggattacaagcgtgagccaccgtgcctggTTTCAccattgtttctgatcagaaatcagtggctaattttatcgtggtgctcttgtacatgaagagaagtttttgtcttactgttttcaatatttgctctttgtcttttcatagcttgacacaaggtgtgtaggagtggatatcttgatttttattttactaaaagtaaacattgattctatagattaatgttttatatcaaatttggtaagttttcagccattatttctgtaaatagttctttgttttccctcttctttctttctgagactctcattctacatatgttgtgcttgatgtttcataagtcatttttctttttcttttttttt-tttgagacagagtttcgctcttgttgcccaggctggagtgcaatggcacgatcttggctcactgcaacctctgcctcccaggttcaagcgattctcttgcctcagcctcc i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160303739 541 - 163208435 ttttagtagagacagggtttcatcatgttggtcaggctggtctcgaactcctgacctcaggtaatccacccgccttggcctctcaaagtgctgggattacaagcgtgagccaccgtgcctggtttcaccattgtttctgatcagaaatcagtggctaatcttatcgtggtgctcttgtacatgaagagaagtttttgtcttactgttttcaatatttactctttgtcttttcatagcttgacacaaggtgtataggagtggatatcttgatttttattttactaaaagtaaacattgattctatagattaatgttttatatcaaatttggtaagttttcagccattatttctataaataatt----ctttcccctcttctttctttctgagactctcattctacatatgttgtgcttgatgtttcataagtcAtttttgtttttcttttttttt----gagacagagtttcactcttgttgcccaggctggagtacagtggcatgatcttggcttactgc----------------ttcaaagcgattgtcttgcctcagcctcc i nomLeu3.chr2 C 0 C 0 a score=23122.000000 s hg38.chr5_KI270795v1_alt 86522 93 + 131892 cggatagtgggatgcaccaccaca-ccagctaattttgtatttttagtagagat-ggggtttctccatgttgatcaggctggtctcgaattcccg s gorGor5.CYUI01000356v1 65608 93 + 152767 cggatagtgggatgcgccaccaca-ccagctaattttgtatttttagtagagat-ggggtttctccatgttgatcaggctggtctcgaattcccg i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160304280 95 - 163208435 cgaatagtgggatgcgccgccacgcccagctaattttgtatttttagtagagacgggggtttctccatgttgatcaggctggtctcgaactccca i nomLeu3.chr2 C 0 C 0 e panPan2.chr5 1779276 32 - 183735486 I e panTro5.chr5 1826931 32 - 181907262 I a score=151732.000000 s hg38.chr5_KI270795v1_alt 86615 177 + 131892 acctcaggtgatccgcctgcctcggtggcccgaagtgctgggattacaggagtgagccacc-gtgcctggccctttttaagttcttttaacataagtaactgctttgaagtctttgtttgctaagtgtgacatctggggacacaaagaca--------------gtttccccccacacttgcctgtttcttt s panTro5.chr5 1826963 177 - 181907262 acctcaggtgatttgcccgcctcggcctcccaaagtgctgggattacaggcgtgagccacc-gtgcctggccCtttttaagttcttttaacataagtaactgctttgaagtctttgtttgctaagtgtgacatctggggacacaaagaca--------------gtttccccccacacttgcctgtttcttt i panTro5.chr5 I 32 C 0 s panPan2.chr5 1779308 177 - 183735486 acctcaggtgatttgcccgcctcggcctcccaaagtgctgggattacaggcgtgagccacc-gtgcctggccCtttttaagttcttttaacataagtaactgctttgaagtctttgtttgctaagtgtgacatctggggacacaaagaca--------------gtttccccccacacttgcctgtttcttt i panPan2.chr5 I 32 C 0 s gorGor5.CYUI01000356v1 65701 178 + 152767 acctcaggtgatccgcctgcctcggtggcccaaagtgctgggattacaggtgtgagccacctgtgcctggccctttttaagttcttttaacataagtaactgctttgaagtctttgtttgctaagtgtgacatctggggacacaaagaca--------------gtttccccccacacttgcctgtttcttt i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160304375 190 - 163208435 acctcaggtgatccgcccgcctcagccacccaaagtgctgggattacaggtgtgagccacc-gtgcccggccCttttttagttcttttaacataagtaactgctttgaagtcttcgtttgctaagtgtgacatctggggacacaaagacagtttctattaactggtttccccccacacttgcctgtttc-tt i nomLeu3.chr2 C 0 C 0 a score=740369.000000 s hg38.chr5_KI270795v1_alt 86792 212 + 131892 ttgtcttgtaacttatcattgaacactggatactttaggttatagactcttcaactctggattctgattcttttctgctgaga---gttgttactg-tttgttcgtttgtttgtaaccagcctgcactaaatttgtaaattctgtaagcagcgtgtagccggagccgtctctgctcattttttgtttgt-----ttcttatgcatggcttcccaggaaccg s panTro5.chr5 1827140 212 - 181907262 ttgtcttgtaacttatcattgaacactggatactttaggttatagactcttcaactctggattctgaatcttttctgctgaga---gttgttactg-tttgttcgtttgtttgtaaccagcctgtactaaatttgtaaattctgtgagcagcgtgtatccggagccatctctgctcattttttgtttgt-----ttcttatgcatggcttcccaggaaccg i panTro5.chr5 C 0 C 0 s panPan2.chr5 1779485 212 - 183735486 ttgtcttgtaacttatcattgaacactggatactttaggttatagactcttcaactctggattctgaatcttttctgctgaga---gttgttactg-tttgttcgtttgtttgtaaccagcctgtactaaatttgtaaattctgtgagcagcgtgtatccggagccatctctgctcattttttgtttgt-----ttcttatgcatggcttcccaggaaccg i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 65879 208 + 152767 ttgtcttgtaacttatcattgaacactggatgctttaggttatagactcttccactctggattctgattcttttctgctgaga---ggtgttactg-tttgttagtttgtttgtaaccagcctgcactaaatttgtaaattctgtgagcagcgtgtagccggagccgtctctgctca----ttgtttgt-----ttcttatgcatggcttcccaggaaccg i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160304565 212 - 163208435 ttgtcttgtaacttatcattgaacactggatactttgggttacagactcttcaactctggattctgattcttttctgcttagc---gttgttactg-tttgtgcgtttgtttgtaatcagcctgtactaaatttgtaaattctgtgagcagtgtgtagccacagccatctctgctcattttttgtttgt-----ttcttatgcatggcttcccaggaaccg i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3586611 221 - 180051392 ttgtcttgtaacttatcattgaacactgggtactttaggttatagactgttctatgctggattctgcttcttttctcctgagaattgttgttactgttttgttcatttgtttgtaacctgcctgtactaaatttgtaaatttggtcagcagtgtgtagccacagccgcctctgctcattttttgtttgtttctgttcttatgcatggcttcccaggaaccg i rheMac8.chr6 N 0 C 0 s macFas5.chr6 3774066 221 - 181584905 ttgtcttgtaacttatcattgaacactgggtactttaggttatagactgttctatgctggattctgcttcttttctcctgagaattgttgttactgttttgttcatttgtttgtaacctgcctgtactaaatttgtaaattcggtcagcagtgtgtagccacagccgcctctgctcattttttgtttgtttctgttcttatgcatggcttcccaggaaccg i macFas5.chr6 N 0 C 0 s macNem1.NW_012020287v1 3794941 215 + 4899514 ttgtcttgt-acttatcattgaacactgggtac-ttaggttatagactgttctatgctggattctgcttcttttctcctgagaattgttgttactg-tttgttcatttgtttgtaacctgcctgtactaaatttgtaaatt--gtcagcagtgtgtagccacagccgcctctgctca-tttttgtttgtttctgttcttatgcatggcttcccaggaaccg i macNem1.NW_012020287v1 N 0 C 0 s cerAty1.NW_012001120v1 3519656 221 - 3647740 Ttgtcttgtaacttatcattgaacactgggtactttaggttatagactgttctatgctggattctgcttcttttctcctgagaattgttgttactgttttgttcatttgtttgtaacctgcctgtactaaatttgtaaattcagtcagcagtgtgtagccacagccgcctctgctcattttttgtttgtttctgttcttatgcatggcttcccaggaaccg i cerAty1.NW_012001120v1 N 0 C 0 s chlSab2.chr23 79654120 218 + 82825804 ttgtcttgtaacttatcattgaacactgggtactttaggttatagactgttctatactggattctg---attttctcccgagaattgttgttactgttttgttcatttgtttgtaacctgcctgtactaaatttgtaaattcggtcagcaatgtatagccacagccgcctctgctcattttttgtttgtttctgttcttatgcacggcttcccaggaaccg i chlSab2.chr23 N 0 C 0 a score=2908655.000000 s hg38.chr5_KI270795v1_alt 87004 676 + 131892 ctcctttatctgcgtgcttggtattctgccaacagttgt-ctgaatttgtacactaacaccttgagtcggtgaggcttccactg-tggctgatggatctacccgt-ggactagggcgtgcacacacagctcagg-ccatctgctttccacaggcacctcccctcgctgtgtcttctcttcgcatgagctca-ggcaccgtc-atcagtcagtgatgctgggtggtttgggcaggttctggtctctGAGGAGACGAGCAGAGCTACTGGTCCTTCCTGTGTGTTTGCATCGATATCCCTATTTGAAAATTCTCCA-AATCATGTGAGTCCCTCTGGTGGTGA--CAGCAAAGCTGCTG-GTTT-CATGGTGTTCAAC-AAATGTGTTTTATATTTAGGTCTATGggccgggagtg-gtggctcaggcctgtaatccaagcactt-tgggagactgag-gtgg-g-----cagatcacca---gaagtcaggagttcaagaccagcctggccaacatggtgaaaccccatctctactaaaaatacaaaatttagccaggcatggtggtggtcacctgtaatcccagctact--cagtgggctgaggctggagaatcgcttgaacctgggaggcagaggttgcagtgagccgagattgcacACAAtaaataaatgatttaatgccca-tacaatggagtgctgtgc s panTro5.chr5 1827352 681 - 181907262 ctcctttatctgcgtgcttggtattctgccaacagttgt-ctgaatttgtatacgaacaccttgagtcggtgaggcttccactg-ttgctgatggatctacccgt-ggactagggcgtgcacacagagctcagg-ccatctgctttccacaggcatctcccctcgctgtgtcttctcttcgcatgagctca-ggcaccgtc-atcagtcagtgatgctgggtggtttgggcaggttccggtctctGAGGAGAAGAGCAGAGCTACTGGTCCTTCCTGTTTGTTTGCATCAATATCCCTATTTGAAAATTctcca-aatcatgtgagtccctctggtggtga--cagcaaagctgctg-gttt-catggcGTTCAAC-AAATGTGTTTTATATTTAGGTCTATGggccgggagtg-gtggctcaggcctgtaatccaagcactt-tgggagactgag-gtgg-gtggggcggatcaccg---gaagtcaggagttcaagaccagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaatttagccaggcatggtggtggtcacctgtcatcccagctact--cagggggctgaggctggagaatcgcttgaacctgggaggcagaggttgcagtgagccgagattgcacACAAtaaataaatgatttaatgccca-tacaatggagtgccgtgc i panTro5.chr5 C 0 C 0 s panPan2.chr5 1779697 681 - 183735486 ctcctttatctgcgtgcttggtattctgccaacagttgt-ctgaatttgtatacgaacaccttgagtcggtgaggcttccactg-ttgctgatggatctacccgt-ggactagtgcgtgcacacagagctcagg-ccatctgctttccacaggcatctcccctcgctgtgtcttctcttcgcatgagctca-ggcaccgtc-atcagtcagtgatgctgggtggtttgggcaggttctggtctctGAGGAGAAGAGCAGAGCTACTGGTCCTTCCTGTTTGTTTGCATCAATATCCCTATTTGAAAATTctcca-aatcatgtgagtccctctggtggtga--cagcaaagctgctg-gttt-catggcGTTCAAC-AAATGTGTTTTATATTTAGGTCTATGggccgggagtg-gtggctcaggcctgtaatccaagcactt-tgggagactggg-gggg-ggggggcggatcaccg---gaagtcaggagttcaagaccagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaatttagccaggcatggtggtggtcacctgtcatcccagctact--cagggggctgaggctggagaatcgcttgaacctgggaggcagaggttgcagtgagccaagattgcacACAATAAATAAATGATTTAATGTCCA-TAAAATGGACTGCCGTGC i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 66087 675 + 152767 ctcctttatctgcgtgcttggtattctgccaacagttgt-ctgaatttgtacgctaacaccttgagtcggtgaggcttccactg-ttgctgatggatctacccgt-ggactagggcgtgcacacagagctcagg-ccatctgctttccacaggcatctcccctcgctgtgtcttc-cttcacatgagctca-ggcaccgtc-atcagtcagtgatgctgggtggtttgggcaggttctggtctctGAGGAGACGAGCAGAGCTACTGGTCCTTCCTGTGTGTTTGCATCGATATACCTATTTGAAAATTctcca-aatcatgtgagtccctctggtggtga--cagcaaagctgctg-gttt-catggTGTTCAAC-AAATGTGTTTTATATTTAGGTCTATGggccgggactg-gtggctcaggcctgtaatccaagcactt-tgggagactgag-gtgg-g-----cagatcacca---gaagtcaggagttcaagaccagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaatttagccaggcatggtggtggtcacctgtaatcccagctact--cagtgggctgaggctggagaatcgcttgaacctgggaggcagaggttgcagtgagccgagattgcacACAAtaaataaatgatttaatgccca-tacaatggagtgctgtgc i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160304777 675 - 163208435 ctcctgtgtctgcatgcttggtgttccacccacagttgt-ctgaatttgcacactaacaccttgagtcggtgaggcttccactg-cggctgatggatctacctgc-ggactagggtgtgcgtacagagcacaga-ccatctgctttccacaggcctctcccctcgctgtgtcttctcctcacatgag-tca-ggcaccgtc-atcagtcagggatgctgggtggtttgggcaggctctggtctctGACGAGACGAGCAGAGCTGCTGGTCTTTCCTGTTTGTTTGCATCAATATCCCTATTTGAAAATTCTCCA-AATCATGTGAGTTCCTCTGGTAGTGA--CAGCAAAGCTGCTG-GTTT-CATGGCGTTCAAC-AAACGTGTTTTATATTTAGGTCTATGggccgggagtg-gtggctcaggcctgtaatccaagcactt-tgggagactgag-gtgg-g-----cggatcaccg---gaggtcaggagttcaagaccagcctggccaacatggtgaaaccccatctctactaaaaatacaaaatttagccaggcatggtggtgggcaactgtaatcccagctact--cagggggctgaggctggagaatcgcttgaacctgggaggcagaggttgcagtgagccgagattgcacACAAtaaataaatgatttaatgccca-tacaatggagtgctgtgc i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3586832 676 - 180051392 ctcctttatctgcatgcatggtattccgccaacagttgt-gtgaatttgtgcactaacaccttgagtcggtgaggcttccattg-ctgctgatggatctccccgt-ggactggggcgtgcacacagagctcagg-cCATCTGCTTTCCACAGGA--TTCCCCTCGCCATGTTCTTCTTTCACATGCGCTCTCGGCACTGTC-ATCAGTCA-GGATGCTGGGTGGTTT-GGCAGGTTCTGGTCTCTGGGGAGACGAGCAGAGCTCTTGGTCCTTCCTGTT--GTTGCATCAATATCCCTGTTTGAAAATTCTC---AAATATGTGAGGTCCTCTCCTGGTGGGTGAGCAAAGCTGCTGCGTTTGCGTGTCGTTCAACAAAATGTGTTTTATATTTA-GTCTATGGGCCCAGAGTGTgtggctcggccctgtaat-ccagcacttttgggagactg---gtggag-----cggatcaccttgaaaggtcaggagttcaagaccagcctggccaacatggtgaaaccccatctctactaaaaatacacaaattagccgggcgtggtggcgcacgtctgtgatcccagctact--cagggggctgaggcaggagagtcacttgaacccgggaggtggaggttgcagtgagctgagattgcacACAATAAATTAATGATTTAATGCCCA-TATAATGGAGTGCTGTGA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3774287 676 - 181584905 ctcctttatctgcatgcatggtattccacctacagttgt-gtgaatttgtgcactaacaccttgagtcggtgaggcttccattg-ctgctgatggatctccccgt-ggactggggcgtgcacacagagctcagg-ccatctgctttccacaggcatctccccacgccgtgtcttctcttcacatgcactca-ggcaccgtc-atcagtcagggatgctgggtggtttgggcaggttctggtctctGGGGAGACGAGCAGAGCTACTGGTCCTTCCTGTTTGTTTGCATCAATATCCCTGTTTGAAAATTctcca-aatcatgtgaggccctctggtggtga--cagcaaagctgctg-gttt-CGTGGCGTTCAAC-AAATGTGTTTTATATTTAGGTCTATGggcccagagtg-gtggctcgggcctgtaatcccagcactt-tgggagactgag-gtgg-g-----cggatcacct---gaagtcaggagttcaagaccagcctggccaacatggtgaaaccccatctctactaaaaatacacaaattagccgggcgtggtggcgcacgtctgtgatcccagctact--cagggggctgaggcaagagagtcacttgaacccgggaggtggaggttgcagtgagctgagattgcacACAATAAATTAATGATTTAATGCCCA-TATAATGGAGTGCTGTGA i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3795156 679 + 4899514 ctcctttatctgcatgca-ggtattccgccaacagttgtggtgaatttgtgcactaacaccttgagtc-gtgaggcttccattgcctgctgatggatctccccgcgggactggggcgtgcacacagagctcaggcccatctgctttccacagccatctcccctcgacgtgtcttctcttcacatgcgctcagggcaccgtctatcagtcagggaagctgggtggttcaggcaggttctggtctctGGGGAGACGAGCAGAGCTACTGGTCCTTCCTGTTTGTTTGCATCAATATCCCTGTTTGAAAATTCTCCACAATCATGTGAGGCCTCTGGGTGGTGA--CAGCAAAGCTGCTG-GTTT-CGTGGCGTTCAAC-AAATGTGTTTTACATTTAGGTCTATGAACCC-GAgtg-gtggctcaggcctgtgatcccagcactt---gggaactgagtgtgg-g-----tggatcacct---gaggtca-gagttcaagaccagcctggccagcatggtgaagccccatctctactaaaaatacaaaaattagctgggtgtggtggcgcatgtctgtaatcccagctact--cgggggcgttgagcaggtgagtcacttgaacccgggaggtggaagttgcagtgagctgagatTATACACAATAAATTAACGATTTAATGCCCACTATAATGGAGTGCTGTGA i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012001120v1 3519877 677 - 3647740 ctcctttatctgcatgcatggtattccgccaacagttgt-gtgaatttgtgcactaacaccttgagtcggtgaggcttccatta-ctggtgatggatctccccgt-ggactggggcgtgcacacagagctcagg-ccatctgctttccacaggcatctcccctcgccgtgtcttctcttcacatgcgctca-ggcaccgtc-atcagtcagggatgctgggtggttcgggcaggttctggtctctGGGGAGACGACCAGAGCTACTGGTCCTTCCTGTTTGTTTGCATCAATATCCCTGTTTGAAAATTctcca-aatcatgtgagtccctctggtggtga--cagcaaagctgctg-gttt-CGTGGCATTCAAC-AAATGTATTTTACATTTAGGTCTATGAgccgggagtg-gtggctcaggcctgtaatcccagcactt-tgggagactgag-gtgg-g-----cagatcacct---gaggtcaggagttcaagaccagcctggccaacatggtgaaaccccatctctactaaaaatacaaaaattagctgggcgtggtggcgcacgtctgt-atcccagctacttacggggggctgaggcaggagagtcacttgaacccgggagatggaagttgcagtgagctgagattgcacACAATAAATTAACGATTTAATGCCCA-TATAATGGAGTGCTGTGA i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79654338 676 + 82825804 ctcctttgtctgcatgcatggtattccgccaacagttgt-gtgaatttgtgcactaacaccttcagtcggtgaggcttctgttg-ctgctgatggatctccccgt-ggactggggcgtgcacacagagctcagg-ccatctgctttccacaggcatctcctctcgccgtgtcttctcgtcacatgcgctca-ggcactgtc-atcagtcagggatgctgggtggtttgggcaggttctggtctctGGGGAGACGAGCAGAGCTACTGGTCCTTCCTGTTTGTTTGCATCAATATCCCTGTTTGAAAATTCTCCA-AATCGTGTGAGTCCCTCTGGTGGTGA--CAGCAAAACTGTGG-GTTT-CATGGCATTCAAC-AAATGTGTCTTACATTTAGGTCTATGGCcccggagtg-gtggctcatacctataatcccagcactt-tgggagactgag-gtgg-g-----cagatcacct---gaggtcaggagttcgagaccagcctggccaacatggtgaaaccccatctctactaaaaatacaaaaattagccgggcgtggtggcgcacgtctgtaatcccagctact--cagggggctgaggcaggagagtcacttggacccaggaggtggaggttgcagtgagctgagattgTACACGATAAATTAATGATTTAATGCCCA-TATAATGGAGTGCTGTGA i chlSab2.chr23 C 0 C 0 s colAng1.NW_012117422v1 98980 670 - 815015 ctcctttatctgtatgcatggtattccgccaatagttgt-gtgaatttgtgcactaacaccttgagtcggtgaggcttccattg-ctgctgatggatctccccgt-ggactggggcatgcacacagagctcagg-ccatctgctttccacaggcatctcccctcgccgtgtcttctcttcacatgcactca-ggc-------accagtcagggatgctgggtggtttgggcgggttctggtctctGGGGAGACCAGCAGAGCTACTGGTCCTTCCTGTTTGTTTGCATCAATATCCCTACTTGAAAATTctcca-aatcatgtgagtccctctggtggtgt--cagcaaagctgctg-gttt-catggcGTTCAAC-AAATGTGTTTTATATTTAGGTCTATGGCcccggagtg-gtggctcaggcctgtaatcccagcactt-tgggagactgag-gtgg-g-----tggatcacct---gaggtcaggagttcaagaccagcctggccaagatggtgaaaccccatctctactaaaaatacaaaaattagccgggcatggtggcacacatctgtaatcccagctact--tggggggctgaggcaggagagtcacttgaacccgggaggtggaggttgcagtgagctgagactgcacACAATAAATAAATGATTTAATGCCTA-TACAATGGAGTGCTGTGT i colAng1.NW_012117422v1 N 0 C 0 a score=2016245.000000 s hg38.chr5_KI270795v1_alt 87680 395 + 131892 agctcttaaa-aagaatgCCACAAGCATGGTCAACACATACTGTTCTACTGGatgaggagtattaccatcagctccatttttcaggtgagaaaactgagacttagggaggctacataattttccgaaggtcactccctactgaatgtaggagcagggatctgacagccacctaatgacaccctagaacagcactctctcctccgcTCTCCTCCATGTCCCCCTCTGACT-CCCGGGAGACCTCCCCAGCT-TGCAGTCCCCA-GGGCCCTGGTGTCCATAACCCGAGGAAGGGGAGGGGCCCATGAGATCTTGGACTTTCTCACTTTCTGAAAATGAGCAACTGAGAACGAGACTTGACTTTGCTTAGGAAGTATAAACAAATGCGACA-TTTATTGCCT s panTro5.chr5 1828033 380 - 181907262 agctcttaaa-aagaatgCCACGAGGATGGTCAACACATGCTGTTCTCCTGGatgaggattattaccatcagctccatttttcaggtgagaaaactgagacttagggaggctacataattttccgaaggtcactccctactgactgtaggagcagggatctcacagccacctaatgacaccctagaacagcactctctcctccgctctcctccatgtccccctctgACT-CCCGGGAGACCTCCCCAG----------------GGCCCTGGTGTCCATAACCCGAGGAAGGGGAGGGGCCCATGAGATCTTGGACTTTCTCACTCTCTGAAAATGAGCAACTGAGAACGAGACTTGACTTTGCTTAG-AAGTATAAACAAATGCGACA-TTTATTGCCT i panTro5.chr5 C 0 C 0 s panPan2.chr5 1780378 394 - 183735486 AGCTCTTAAA-AAGAATGCCACGAGGATGGTCAACACATGCTGTTCTCCTGGatgaggattattaccatcagctccatttttcaggtgagaaaactgagacttagggaggctacataattttccgaaggtcactccctactgactgtaggagcagggatctcacagccacctaatgacaccctagaacagcactctctcctccgctctcctccatgtccccctctgACT-CCCGGGAGACCTCCCCAGCT-TGCAGTCCCCA-GGGCCCTGGTGTCCATAACCCGAGGAAGGGGAGGGGCCCATGAGATCTTGGACTTTCTCACTCTCTGAAAATGAGCAACTGAGAATGAGACTTGACTTTGCTTAG-AAGTATAAACAAATGCGACA-TTTATTGCCT i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 66762 394 + 152767 agctcttaaa-aagaatgccacaaggatggtcaacacatactgttCTCCTGGatgaggagtattaccatcagctccatttttcaggtgagaaaactgagacttagggaggctacataattttccgaaggtcactccctactgaatgtaggagcaaggatctgaCAGCCACCTAATCACACCCTAGAACAGCATTCTCTCCTCCGCTCTCCTCCATGTCCCCCTCTGACT-CCCGGGAGAGCTCCCCAGCT-TGCAGTCCCCA-GGGCCCTGGTGTCCATAACCCGAGGAAGGGGAGGGGCCCATGAGATCTTGGACTTTCTCACTTTCTGAAAATGAGCAACTGAGAATGAGACTTGACTTTGCTTAG-AAGTATAAACAAATGCGACA-TTTATTGCCT i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160305452 380 - 163208435 agctcttaaa-aagaatgccacgaggatgatcaacacatactattTTCCTGGatgaggattattatcatcagctccattttccagatgagcaaaccgagacttagggaggctacataattttctgaaggtcactccctactgaatgtaggagcagggatctgacagccacctaatcacaaccaagaacagcgttctctcctccgctcttctccacgtccccctctgACT-CCCAGGAGACCTCCCCAG----------------GGCCCTGGTGTCCATAACCCAAGGAAGGGGAGGGGCCCATGAGATCTTGGACTTTCTCATTCTCTGAAAATGAGCAACTGAGATCGAGACTTGACTTTGCTTAG-AAGTATAAACAAATGCGACA-TTTATTGCCT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3587508 385 - 180051392 AGCTCTTAAA-AAGAATGCCATGAGGATGATCAACAAATACTGTTCTCCTGGatgaggattattaccatcagctccatttttcagatgagaaaactgagactta----ggttacataattttctgaaggtcactccctactgaatgtaggagcggggatctgacagccacctgatcacacccaagaacagcattctctcctccgctctcctccatggccccctgTGACT-CCCAGGAGACCTCCCCAGCTCTGCAGTCCCCA-GGGCCCTGGTGTCCATAACCCGAGGAAGGGGAAGGG-CCATGAGATCTTGGGCTTTCTCACTCTCCGAAAATGAGCAAGTGAGAATGA-----GGCTTTGCTTAG-AAGTATAAATAAATGCGACA-TTTATTGCCT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3774963 385 - 181584905 AGCTCTTAAA-AAGAATGCCATGAGGATGATCAACAAATACTGTTCTCCTGGatgaggattattaccatcagctccatttttcagatgagaaaactgagactta----ggttacataattttctgaaggtcactccctactgaatgtaggagcggggatctgacagccacctgatcacacccaagaacagcattctctcctccgctctcctccatggccccctgTGACT-CCCAGGAGACCTCCCCAGCTCTGCAGTCCCCA-GGGCCCTGGTGTCCATAACCCGAGGAAGGGGAAGGG-CCATGAGATCTTGGGCTTTCTCACTCTCCGAAAATGAGCAAGTGAGAATGA-----GGCTTTGCTTAG-AAGTATAAATAAATGCGACA-TTTATTGCCT i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3795835 380 + 4899514 AGCTCTTAAAGAAGAATGCCATGAGGATGATCAACAAATACT-TTCTCCTGGatgaggtttattaccatcagctccatttttcagatgagaaaac-gagacttagag-ggttacataattttc-gaaggtcactccctaccgaatgtaggagc-gggatctgacagccacctgatcacacccaagaacagcattctctctcctgctctcctccatggccccctgTGACTACCCAGGAGAC--TCCCAG-TCTGCAGTCCCCATGGGCCCTGGTGTCCATAACC---GAGAAGGGAAGGG-CCATGAGGATCTGG--CTTCTCACTCTCCGAAAATGAGCAAGTGAGAATGA-----ACTGTTGCTTAG-AAGTATTAAATAATGCGACATTTTATTGCCT i macNem1.NW_012020287v1 C 0 I 34 s cerAty1.NW_012001120v1 3520554 389 - 3647740 AGCTCTTAAA-AAGAATGCCATGAGGATGATCAACAAATACTGTTCTCCTGggtgaggattattaccatcagctccatttttcagatgagaaaaccgagacttagagaggttacataattttccgaaggtcactccctactgaatgtaggagcggggatctgacagccacctgatcacacgcaagaacagcattctctcctctgctctcctccatggccccctgTGACT-CCCAGGAGACCTCCCCAGCTCTGCAGTCCCCA-GGGCCCTGGTGTCCACAACCCGAGGAAGGGGAAGGG-CCGTGAGATCTCGGGCTTTCTCACTCTCCGAAAATGAGCAAGTGAGAATGA-----GGCTTTGCTTAG-AAGTATAAATAAATGCGACA-TTTATTGCCT i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79655014 389 + 82825804 AGCTCTTAAA-AAGAATGCCACGAGGATGACCAACACATACTGTTCTCCTGGATgaggatgattaccatcagctccatttttcagatgagaaaactgagacttagagaggttacataattttccgaaggtcactccctactgaatgtaggagcggggatctgatagccacctgatcacacgcaagaacagcattctctcctctgctctcctccatgcccccctgTGACT-CCCAGGAGACCTCCCCAGCTCTGCAGTCCCCA-GGGCCCTGGTGTCCATAACCCGAGGAAGGGGAAGGG-CTGTGAGATCTTGGGCTTTCTCACTCTCCGAAAATGAGCAAGTGAGAATGA-----GACTTTGCTTAG-AAGTATAAACAAATGCGACA-TTTATTGCCT i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1615750 389 - 1768974 AGCTCTTAAA-AAGAATGCCATGAGGATGATCAACAAATACTGTTCTCCTGGatgaggattattaccatcagctccatttttcagatgagaaaactgagacttagacaggttacataattttccgaaggtcactccctactgaatgtaggagtggggatctgaCAGCCACCTAATCACACGCAAGAACAGCATTCTCTCCTCCGTTCTCCTCCATGGCCCCCTGTGACT-CCCAGGAGACCTCCCCAGCTCTGCAGTCCCCA-GGGCCCTGGTGTCCATAACTCGAGGAAGGGGAAGGG-CCATGAGATCTTGGGCTTTCTCACTCTCTGAAAATGAGCAAGTGAAAATGA-----GACTTTGCTTAG-AAGTATAAATAAATGCGACA-TTTATTGCCT i manLeu1.NW_012103876v1 N 0 C 0 s colAng1.NW_012117422v1 99650 389 - 815015 AGCTCTTAAA-AAGAATGCCATGAGGATGACCAACAAATACTATTCTCCTGGatgaggattattaccatcagctccatttttcagatgagaaaaccgagacttagagaggttacataattttccgaaggtcagtctctattgaacgtaggagcagggatctgaCAGCCACCTGATCACACGCAGGAACAGCATTCTCTCCTCCGCTCTCCTCCATGGCCCCCTGTGACT-CCCAGGAGACCTCCCCAGCTCTGCAGTCCCCA-GGGCCCTGGTGTCCATAACCCGAGGAAGGGGAAGGG-CCATGAGATCTTGGGCTTTCTCGCTCTTGGAAAATGAGCAAGTGAGAATGA-----GACTTTGCTTAG-AAGTATAAATAAATGCGACA-TTTATTGCCT i colAng1.NW_012117422v1 C 0 C 0 a score=130970.000000 s hg38.chr5_KI270795v1_alt 88075 34 + 131892 ATCAAATATTAGAAGCAGTTCGTCTATTTAAC--GT s panTro5.chr5 1828413 36 - 181907262 ATCAAATATTAGAAGCAGTTCGTCTATTTAACATGT i panTro5.chr5 C 0 C 0 s panPan2.chr5 1780772 36 - 183735486 ATCAAATATTAGAAGCAGTCCGTCTATTTAACATGT i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 67156 34 + 152767 ATCAAATAGTAGAAGCAGTTCGTCTATTTAAC--GT i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160305832 34 - 163208435 ATCAAATATTAGAAGCAGTTTGTCTATTTAAC--GT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3587893 34 - 180051392 ATCAAATATGAGAAGCAGTTTCTCTGTTTAAC--AC i rheMac8.chr6 C 0 I 2 s macFas5.chr6 3775348 34 - 181584905 ATCAAATATGAGAAGCAGTTTCTCTGTTTAAC--AC i macFas5.chr6 C 0 I 2 s cerAty1.NW_012001120v1 3520943 34 - 3647740 ATCAAATATGAGAAGCAGTTTCTCTGTTTAAC--AC i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79655403 34 + 82825804 ATCAAATATGAGAAGCAGTTTATCTGTTTAAC--AC i chlSab2.chr23 C 0 I 2 s manLeu1.NW_012103876v1 1616139 32 - 1768974 ATCAAATATGAGAAGCAGTTTCTCTGTTTAAC---- i manLeu1.NW_012103876v1 C 0 C 0 s colAng1.NW_012117422v1 100039 34 - 815015 ATCAAATATGAGAAGCAGTTTCTCTGTTTAAC--AC i colAng1.NW_012117422v1 C 0 C 0 e macNem1.NW_012020287v1 3796215 34 + 4899514 I a score=861598.000000 s hg38.chr5_KI270795v1_alt 88109 157 + 131892 GTGTTAGTATCGGTGTTCCTTTTTATTCAAACTCTCCCTATTGAGCTCAAGAATCAAAGTCAGA--TAAC-TTTGTCGATAAAT-CCCTTCCTTTCTACACCCTTGCTACTCACTG-TCTCAAGACCCAAACTCACTGGGACAAGGCGCTGCCCCTCCTGAT s panTro5.chr5 1828449 157 - 181907262 GTGTTAGTATCGGTGTTCCTTTTTATTCAAACTCTCCCTATTGAGCTCAAGAATCAAAGTCAGA--TAAC-TTTGTCGATAAAT-CCCTTCCTCTCTACACCCTTGCTACTCACTG-TCTCAAGACCCAAACTCGCTGGGACAAGGCGCTGCCCCTCCTGAT i panTro5.chr5 C 0 C 0 s panPan2.chr5 1780808 157 - 183735486 GTGTTAGTATCGGTGTTCCTTTTTATTCAAACTCTCCCTATTGAGCTCAGGAATCAAAGTCAGA--TAAC-TTTGTCGATAAAT-CCCTTCCTCTCTACACCCTTGCTACTCACTG-TCTCAAGACCCAAACTCACTGGGACAAGGCGCTGCCCCTCCTGAT i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 67190 157 + 152767 GTGTTAGTATCGGTGTTCCTTTTTATTCAAACTCTCCCTATTCAGCTCAAGAATCAAAGTCAGA--TAAC-TTTGTCGATAAAT-CCCTTCCTCTCTGCATCCTTGCTACTCACTG-TCTCAAGACCCAAACTCACTGGGACAAGGCGCTGCCCCTCCTGAT i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160305866 157 - 163208435 GTGTTAGTATCGGTGTCCCTTGTTATTCAGACTCTCCCTATTGAGCTCAAGAATCAAAGTCAGA--TAAC-TTTGTCGATAAAT-CCCTTCCTCTCTACACCCTTGCTACTCACTG-TCTCAAGACCCAAACTCACTGGGACAAGGCTCTGCCCCTCCTGAT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3587929 156 - 180051392 GTGTTAGTATCGGTGTCCCTTGTTATTCAAACTCTCCCTATTGAGCTCGAGAATCAAAGTCAGA--TAAC-TTTGTCGATAAAT-CCCTTCCTCTCTGCACCCTTGCTACTCACTG-TCTCAAGACCCAAACTCACTGGGACAGGGCGCTGG-CCTCCTGAT i rheMac8.chr6 I 2 C 0 s macFas5.chr6 3775384 156 - 181584905 GTGTTAGTATCGGTGTCCCTTGTTATTCAAACTCTCCCTATTGAGCTCAAGAATCAAAGTCAGA--TAAC-TTTGTCGATAAAT-CCCTTCCTCTCTGCACCCTTGCTACTCACTG-TCTCAAGACCCAAACTCACTGGGACAGGGCGCTGG-CCTCCTGAT i macFas5.chr6 I 2 C 0 s macNem1.NW_012020287v1 3796249 156 + 4899514 GTGTTAGTATTGGTGGTCCCTTGTATTCAAACTC-CCCTATTGAGCTCGAGAATCAAAGTCAGA--TAACTTTTGTCGATGAATCCCCTTCCTCTCTGCACCCTTGCTA-TCACTGTTCTCAAGACCCAAACTCACTGGGACAAGGCGCTGG--CTCCTGAT i macNem1.NW_012020287v1 I 34 I 124 s cerAty1.NW_012001120v1 3520977 158 - 3647740 GTGTTAGTATCGGTGTCCCTTGTTATTCAAACTCTCCCTATTGAGCTCGAGAATCAAAGTCAGATCTAAC-TTTGTCGATAAAT-CCCTTCCTCTCTGCAGCCTTGCTACTCACTG-TCTCAAGACCCAAACTCACTGGGACAAGGCGCTGG-CCTCCTGAT i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79655439 155 + 82825804 GTGTTAGTATCGGTGTTCCTTGTTATTCAAACTCTCCCTATTGAGCTCAAGAATC--AGTCAGA--TAAC-TTTGTCGATAAAT-CCCTTCCTCTCTGCACCCTTGCTACTCACTG-TCTCAAGACCCAAACTCACTGGGACAAGATGCTGGCCCTCCTGAT i chlSab2.chr23 I 2 C 0 s manLeu1.NW_012103876v1 1616171 156 - 1768974 GTGTTAGTATCAGTGTCCCTTGTTATTCAAACTCTCCCTATTGAGCTCGAGAATCAAAGTCAGA--TAAC-TTTGTCGATAAAT-CCTTTCCTCTCTGCACCCTTGCTACTCACTG-TCTCAAGACCCAAACTCACTGGGACAAGGCGCTGG-CCTCCTGAT i manLeu1.NW_012103876v1 C 0 C 0 s colAng1.NW_012117422v1 100073 157 - 815015 GTGTTAGTATCGGTGTCCCTTGTTATTCAAACTGTCCCTATTAAGCTCAAGAATCAAAGTCAGA--TAAC-TTTGTCGATAAAT-CCCTTCCTCTCCACACCCTTGCTACTCACTG-TCTCAAGACCCAAACTCACTGGGACAAGGCGCTGGCCCTCCTGAT i colAng1.NW_012117422v1 C 0 C 0 a score=532447.000000 s hg38.chr5_KI270795v1_alt 88266 131 + 131892 TCAAGCCTGGTGTCTGCCTCTCACTATGCAAATCAGGAGCCAGACAGCCGCGGAGAGGG-CGGCGGTGAGTGCACAGAGCACACGCATGCGTTCGGCTTGCCCCCACGCCGCCCCCGTTATCTCTGTGCGTG s panTro5.chr5 1828606 132 - 181907262 TCAAGCCTGGTGTCTGCCTCTCACTATGCAAATCAGGAGCCAGACAGTCGCGGAGAGGGGCGGCGGTGAGTGCACAGAGCACACGCATGCGTTCGGCTTGCCCCCACGCCGCCCCCATTATCTCTGTGGGTA i panTro5.chr5 C 0 C 0 s panPan2.chr5 1780965 127 - 183735486 TCAAGCCTGGTGTCTGCCTCTCACTATGCAAATCAGGAGCCAGACAGTCGCGGAGAGGGGCG-----GAGTGCACAGAGCACACGCATGCGTTCAGCTTGCCCCCACGCCGCCCCCATTATCTCTGTGGGTG i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 67347 131 + 152767 TCAAGCCTGGTGTCTGCCTCTCACTATGCAAATCAGGAGCCAGACAGCGGCGGAGACGG-GGGCGGTGAGTGCACAGAGCACACGCATGCGTTCGGCTTGCCCTCACCCCGCCCCCATTATCTCTGTGGGTG i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160306023 132 - 163208435 TCAAGCCTGGTGTCTGCTTCTCACTATGCAAATCAGGAGCCAGAGAGCAGCGGAGAGGGGCGGCGGTGAGTGCACAGAGCACACACATGCGTTCGGATTGCCCCCACCCCGCTCCCATTATCTCTACTGGTG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3588085 130 - 180051392 TCTAGCCTGGTGTCTGCCTCTCACTACGCACATCGGGAGCCAGAGAGCAGAGGAGGGG--CGGCTGTGAGTGCACAGAGCACACACGTGCGATGGGATTGCCCCCACCCCGCCCCCATTATCTCTATGGGTG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3775540 130 - 181584905 TCTAGCCTGGTGTCTGCCTCTCACTACGCACATCGGGAGCCAGAGAGCAGAGGAGGGG--CGGCTGTGAGTGCACAGAGCACACACGTGCGATGGGATTGCCCCCACCCCGCCCCCATTATCTCTATGGGTG i macFas5.chr6 C 0 C 0 s cerAty1.NW_012001120v1 3521135 129 - 3647740 TCTAGCCTGGTGTCTGCCTCTCACTACGCACATCGGGAGCCAGAGAGCAGAGGAGGGG--CGGCTGTGAGTGCACAGAGCACACACGTGCGATGGGATTGCCCCCACCCCGCCCCCATCATCTCTGT-GGTG i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79655594 125 + 82825804 TCAAGCCTGGTGTCTGCCTCTCACTACGCACATCGGGAGCCAGAGAGCAGAGGAGGGG--CGGCTGTGAGTGCACAGAGCACACACATGC-----GATTGCCCCCACCCCGCCCCCATTATCTCTATGGGTG i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1616327 129 - 1768974 TCTAGCCTGGTGTCTGCCTCTCACTGCGCACATCGGGAGCCAGAGAGCAGAGGAGGGG--CGGCTGTGAGTGCACAGAGCACACACGTGCGATGGGATTGCCCCCGCCCCG-CCCCATTATCTCTGTGGGTG i manLeu1.NW_012103876v1 C 0 C 0 s colAng1.NW_012117422v1 100230 130 - 815015 TCAAGCCTGGTGTCTGCCTCTCACTACACAAATCAGGAGGCAGAGAGCAGAGGAGGGG--CAGCTGTGAGTGCACAGAGCACACTCGTGCGTTGGGGTTGCCCTCACCCCGCCCCCATTATCTCTATGGGTG i colAng1.NW_012117422v1 C 0 C 0 e macNem1.NW_012020287v1 3796405 124 + 4899514 I a score=1173587.000000 s hg38.chr5_KI270795v1_alt 88397 222 + 131892 TGAAGATGAGAAATTTTCACT-TCTCCAGTGAGTTACTGTACTGCTTTGACTCTCACAAGCGTGTCGACTTGATGGATTTTTGTAAATATAGCCG-----TCAGCGGATGCCTCTTGTCCCCATCTCGGGAACCATAACCCAGATTCCCAAAGGGGAGCTTGCCCACATGGATGGAAAC-TGAGGCCCTCAGAGAGGCCATCGGCCTTGATCCCTTGCTCCTATTCAAA s panTro5.chr5 1828738 222 - 181907262 TGAAGATGAGAAATTTTCACT-TTTCCAGTGAGTTACTGTACTGCTTTGACTCTCACGAGTGTGTCGACTTGATGGATTTTTGTAAATATAGCTG-----TCAGCGGATGCCTCTTGTCCCCATCTCGGGAACCATAACCCAGATTCCCAAAGGGGAGCTTGCCCACATGGATGGAAAC-TGAGGCCCTCAGAGAGGCCATCGGCCTTGATCCCTTGCTCCTATTCAAA i panTro5.chr5 C 0 C 0 s panPan2.chr5 1781092 211 - 183735486 TGAAGATGAGAAATTTTCACT-TTTCCAGTGAGTTACTGTACTGCTTTGACTCTCACGAGCGTGTCGACTTGATGGATCC-----------GCCG-----TCAGCGGATGCCTCTTGTCCCCATCTCGGGAACCATAACCCAGATTCCCAAAGGGGAGCTTGCCCACATGGATGGAAAC-TGAGGCCCTCAGAGAGGCCATCGGCCTTGATCCCTTGCTCCTATTCAAA i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 67478 222 + 152767 TGAAGATGAGAAATTTTCACT-TTTCCAGTGAGTTACTGTACTGCTTTGACTCTCACAAGCGTGTCGACTTGATGGATTTTTGTAAATATAGCCG-----TCAGCGGATGTCTCTTGTCCCCATCTCGGGAACCATAACCCAGATTCCCAAAGGGGAGCTTGCCCACATGGATGGAAAC-TGAGGCCCTCAGAGAGGCCATCGGCCTTGATCCCTTGCTCCTATTCAAA i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160306155 222 - 163208435 TGAAGATGAGAAACTTTCACT-TTTCCAGTGAGTTACTGTGCTGCTTTGACTTTCACAAGTGTGTTGACTTGATGGATTTTTGTAAATATAGCTG-----TCAGCAGATGCCTCTTGTCCCCATCTCGGGAACCATAACCGAGATTCCGAAAGGGGAGCTCGCCCGCATGGATGGAAAC-TGAGGCCCTCAGAGAGGCCATCGGCCTTGATCCCTTGCTCCTATTCAAA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3588215 222 - 180051392 TGATGATGAGAAACTTTCACC-TTTCCAGTGAGCTACTGTGCTGCTTGGACTTTCACAGGCGTGTTTACGTGATGGATTTTTGTAAATACCGCCG-----TCAGTGGAGGCCTCTTGTCCCCATCTCGGGAACCATAACCCAGATTCCCAAAGGGGAGCTTGCCCTCATGGATGGAAAC-TGAGGCCCTCAGAGATGCCATCGGCCTTGATCCCTTGCTCCTATTCAAA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3775670 222 - 181584905 TGATGATGAGAAACTTTCACC-TTTCCAGTGAGCTACTGTGCTGCTTGGACTTTCACAGGCATGTTTACGTGATGGATTTTCGTACATACAGCTG-----TCAGTGGAGGCCTCTTGTCCCCATCTCGGGAACCATAACCCAGATTCCCAAAGGGGAGCTTGCCCTCATGGATGGAAAC-TGAGGCCCTCAGAGATGCCATCGGCCTTGATCCCTTGCTGCTATTCAAA i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3796529 221 + 4899514 TGATGATGAGAAACTTTCACCTTTTCCAGTGAGCTACTGTGCTGCTT-GACTTTCACAGGT---TTTACGTGATGGATTTTTGTAAATAC--CTGCCGTCTCAGTGGAGGCCTCTTGTCCCCATCTCGGGAACCATAACC--AGTTCCCAAAGGGGAGCTTGCCCTCATGGATGGAAACATGAGGCCCTCAGAGATGCCATCGGCCTTGGATCCTTGCTGCTATTCAAG i macNem1.NW_012020287v1 I 124 I 32 s cerAty1.NW_012001120v1 3521264 222 - 3647740 TGATGAGGAGAAGCTTTCACC-TTTCCAGTGAGCTGCTGTGCTGCTTGCACTTTCACAGGCGTGTTTACGTGATGGATTTTCGTAAATACCGCCG-----TCAGTGGAGGCCTCTTGTCCCCATCTCGGGAACCATAACCCAGATTCCCAAAGGGGAGCTTGCCCTCATGGATGGAAAC-TGAGGCCCTCAGAGATGCCATCGGCCTTGATCCCTTGCTCCTATTCAAA i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79655719 222 + 82825804 TGATGATGAGAAACTTTCACC-TTTCCAGTGAGCTACTGTGCTGCTTTGACTTTCACAGGCGTGTTTACGTGATGGATTTTCATAAATACAGCCC-----TCAGTGGAGGCCTCTTGTTCTCATCTCGGGAACCATAACCCAGATTCCCAAAGGGGAGCTTGCCCTCATGGATGGAAAC-TGAGGCCCTCAGAGATGCCATCAGCCTTGATCCCTTGCTCCTGTTCAAA i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1616456 222 - 1768974 TGATGATGAGAAGTTTTCACC-TTTCCAGTGAGCTGCTGTGCTGCTTGGACTTTCACAGGCCTGTTTACGTGATGGATTTTCGTAAATACCGCCG-----TCAGTGGAGGCCTCTTGTCCCCATCTCGGGAACCATAACCCAGATTCCCAAAGGGGAGCTTGCCCTCATGGATGGAAAC-TGAGGCCCTCAGAGATGCCATCGGCCTTGATCCCTTGCTCCTATTCAAA i manLeu1.NW_012103876v1 C 0 C 0 s colAng1.NW_012117422v1 100360 222 - 815015 TGATGATGAGAAACTTTCACT-TTTCCAGTGAGCTACTGTGCTGCTTTGACTTTCACAGGCGTGTTTACTTGATGGATTTTTGTAAATACAGCTG-----TCAGTGGAGGCCTCTTGTCCCTATCTTGGGAACCATAACCCAGATTCCCAAAGGGGAGCTTGCCCTCATGGATGGAAAC-TGAGGCCCTCAGAGATGCCATCGGCCTTGATCCCTTGCTCCTATTCAAA i colAng1.NW_012117422v1 C 0 C 0 a score=143259.000000 s hg38.chr5_KI270795v1_alt 88619 37 + 131892 GATCTCAACATTATTGCAGCCTTCCTTGGGGCAGCCG s panTro5.chr5 1828960 37 - 181907262 GATCTCAACATTATTGCAGCCTTCCTTGGGGCAGCCG i panTro5.chr5 C 0 C 0 s panPan2.chr5 1781303 37 - 183735486 GATCTCAACATTATTGCAGCCTTCCTTGGGGCAGCCG i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 67700 37 + 152767 GATCTCAACATTATTGCAGCCTTCCTTGGGGCAGGCA i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160306377 37 - 163208435 GATCTCAACATGACTGGAGCCTTCCTTGGGGCAGCCG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3588437 36 - 180051392 GATCTCGACGTTACCGGAG-ATTCCCTGGGGCAGCCG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3775892 36 - 181584905 GATCTCGACGTTACCGGAG-ATTCCTTGGGGCAGCCG i macFas5.chr6 C 0 C 0 s cerAty1.NW_012001120v1 3521486 36 - 3647740 GATCTCGACATTACCGGAG-ATTCCTTGGGGCAGCCG i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79655941 36 + 82825804 GATCTCGACATTACCAGAG-ATTCCTTGGGGCAGCCG i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1616678 36 - 1768974 GATCTCGACATTACCGGAG-ATTCCTTGGGGCAGCCG i manLeu1.NW_012103876v1 C 0 C 0 s colAng1.NW_012117422v1 100582 36 - 815015 GATCTCGACATTACCGGAG-ATTCCCTGGGGCAGCCG i colAng1.NW_012117422v1 C 0 C 0 e macNem1.NW_012020287v1 3796750 32 + 4899514 I a score=161160.000000 s hg38.chr5_KI270795v1_alt 88656 32 + 131892 GACATTCCCGTGTGGAGGAAGCGTCCACTCAC s panTro5.chr5 1828997 32 - 181907262 GACATTCCCGTGTGGAGGAAGCGTCCACTTAC i panTro5.chr5 C 0 C 0 s panPan2.chr5 1781340 32 - 183735486 GACATTCCCGTGTGGAGGAAGCGTCCACTCAC i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 67737 32 + 152767 GACATTCCCGTCTTGAGGAAGTGTCCACTCAC i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160306414 32 - 163208435 GACATTCCCGTGTTGATGAAGCATCCACTCAC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3588473 32 - 180051392 GACATGCCTGCGTTGAGGAAGCGTCCACTCAC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3775928 32 - 181584905 GACATGCCTGCGTTGAGGAAGCGTCCACTCAC i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3796782 32 + 4899514 GACATGCCTGCGTTGAGGAAGCCTCCACCCTC i macNem1.NW_012020287v1 I 32 C 0 s cerAty1.NW_012001120v1 3521522 32 - 3647740 GACATGCCTGTGTTGAGGAAGCGTCCACTCAT i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79655977 32 + 82825804 GACATTCCTGTGTTGAGGAAGCATCCACTCAT i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1616714 32 - 1768974 GACATGCCTGTGTTGAGGAAGCGTCCACTCAC i manLeu1.NW_012103876v1 C 0 C 0 s colAng1.NW_012117422v1 100618 32 - 815015 GACATTTCTGTGTTGAGGAAGCATCCACTCAC i colAng1.NW_012117422v1 C 0 M 3865 a score=866356.000000 s hg38.chr5_KI270795v1_alt 88688 203 + 131892 GTGC-CATGGGAACTTTGTAGATTTCACTGTGA---TGCAAACAGCTCCCCGTGAGGCCCTCAGTGCCCAGGGCCCGTTGTTGGGTGCTTTTGAGGGTGGGAGGTGGAGG-GGTTTCCATTTTGCTTGGGGGATCAGCATCACCCATTC----TTTCTCCTTTTCCtct-gggctggtgctcagatgg-tgagagcactgtgctgatgaggtgg s panTro5.chr5 1829029 203 - 181907262 GTGC-CATGGGAACTTTGTAGATTTCACTGTGA---TGCAAACAGCTCCCCGTGAGGCCCTCAGTGCCCAGGGCCCGTTGTTGGGTGCTTTTGAGGGTGGGAGGTGGAGG-GGTTTCCATTTTGCTTGGGGGATCAGCATCACCCTTTC----TTTCTCCTTTTCCtct-gggctggtgctcagatgg-tgagagcactgtgctgatgaggtgg i panTro5.chr5 C 0 C 0 s panPan2.chr5 1781372 203 - 183735486 GTGC-CATGGGAACTTTGTAGATTTCACTGTGA---TGCAAACAGCTCCCCGTGAGGCCCTCAGTGCCCAGGGCCCGTTGTTGGGTGCTTTTGAGGGTGGGAGGTGGAGG-GGTTTCCATTTTGCTTGGGGGATCAGCATCACCCTTTC----TTTCTCCTTTTCCtct-gggctggtgctcagatgg-tgagagcactgtgctgatgaggtgg i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 67769 203 + 152767 ATGC-CATGGGAACTTTGTAGATTTCACTGTGA---TGCAAACAGCTCCCCGTGAGGCCCTCAGTCCCCAGGGCCCATTGTTGGGTGCTTTTGAGGGTGGGAGGTGGAGG-GGTTTCCATTTTGCTTGGGGGATCAGCATCACCCTTTC----TTTCTCCTTTTCCtct-gggctggtgctcagatgg-tgagagcactgtgctgatgaggTGG i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160306446 203 - 163208435 GTGC-CATGGGAACTTTGTAGATTTCACTGTGA---TGCAAACAACTCCCTGTGAGGCCCTCAGTGCCCAGGGCCCATTGTTGGGTGCTTTTGAGGGTGGGAGGTGGAGG-GGTTTCCATTTTGCTTGGGGGATCAGCGTCACCCTTTC----TTTCTCCTTTTCCTCT-GGGCTGGTGCTCAGATGG-TGAGAGCGCTGTGCTGATGAGGTGG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3588505 202 - 180051392 ACGC-CGTGGGAACGTTGTAGATTTTACTGTGA---TGCAAAC-ACTCCCTGTGAGGCCCCCGGTGCCCAGGGCCCATTGTTGGGTGCTTTTGAGGGTGGGAGGTGGAGG-CGTTTCCGTTTTGCTTGGGGGATCAGCATCCCCCTTCC----TTTCTCCTTTTCCtct-gggctggtgctcagatgg-tgagagcacagtgctgatgaggTGG i rheMac8.chr6 C 0 I 2715 s macFas5.chr6 3775960 202 - 181584905 ACGC-CGTGGGAACGTTGTAGATTTTACTGTGA---TGCAAAC-ACTCCCTGTGAGGCCCCCGGTGCCCAGGGCCCATTGTTGGGTGCTTTGGAGGGTGGGAGGTGGAGG-CGTTTCCGTTTTGCTTGGGGGATCAGCATCCCCCTTTC----TTTCTCCTTTTCCtct-gggctgctgctcagatgg-tgagagcacagtgctgatgaggtgg i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3796814 207 + 4899514 ACACGCGTGGGAACGTTGTAGA-TTTACTGTGAATGGGCAATA-CATCCCTGTGA-GCCCCCGGTGCCGGGGGCCCATTGTTGGGTGC-TTGGAGGGTGGGAGGTGGAGGTCGTTTCCTTTTTGCTT--GGGATCAGCATCACCCTTTCCCTTTCTCCCTTCTTCCtctggggctggtgctcagatggctgagagcacagtgctgctgaggt-g i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012001120v1 3521554 195 - 3647740 GCGC-CGTGGGAACGTTGTAGATTTTACTGTGA---TGCAAACAACTCCCTGTGAGGCCCCCGGTGCCCAGGGCCCATTGTTGGGTGCTTTTGAGGGTGGGG---------CGTTTCCGTTTTGCTTGGGGGATCAGCATCACCCTTTC----TTTCTCCTTTTCCTCT-GGGCGGGTGCTCAGATGG-TGAGAGCACAGTGCTGATGAGGTGG i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79656009 200 + 82825804 GTGC-CGTGGGAACGTTGTAGATTTTACTGTGA---TGCAAACAACTCCCGATGAGGCCTCCGGTGCCCAGGGTCCATTGTTGGGTGCTTTTGAGGGTGGGAGGTGGAGG-CGTTTCCGTTTTGCTTGGGGGATCAGCCT---CCTTTC----TTTCTCCTTTTCCTCT-Aggctggtgctcagatgg-tgagagcacagtgctgatgaggTGG i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1616746 202 - 1768974 ACGC-CGTGGGAACGTTGTAGATTTGGCTGTGA---TGCAAAC-ACTCCCTGTGAGGCCCCCGGTGCCCAGGGCCCATTGCTGGGTGCTTTGGAGGGTGGGAGGTGGAGG-CGTTTCCGTTTTGCTTGGGGGATCAGCATCACCCTTTC----TTTCTCCTTTTCCtct-gggctggtgctcagatgg-tgagagcacagtgctgatgaggtgg i manLeu1.NW_012103876v1 C 0 C 0 e colAng1.NW_012117422v1 100650 3865 - 815015 M a score=1599631.000000 s hg38.chr5_KI270795v1_alt 88891 491 + 131892 g-ccctggggtggaacccATGGCCCCCTCTGACTCCCAGGAGACCTGGCCAGCTGCAGCGGCCCCC-GTGGACCAGCA-GAGGGACAAGAGAGGAGCTGACGT-GGAGGAGCCGAGGCCC-ACTGGGG--GCTCCTG-GAGAGTCCGTCCGCCTGTGGACAGCAGCTCAGGTGTTCAGCTGCTT--CCAGAGAGGAAG--CACC-TCTTCCTAGACTGAGGCATCGTTTTGATT-------------------AAAAAAAAAAAAAAA--------GTTGATTTTTTTCACCTTGGTGTAAATTTTTGTTAGT-AACAATATGTTAGT-TGT--CAGTTACCAC-TAtttgtttttctttctttctttctttcttttttttttACatttttgaaattattta-cagagatgggctctcgctacgttgtccaggctggtctcagactcctggcctcagtggtcctcccaccttggcctcccaaagt--gctgggactacaggtgtgagccgtggcacctggcctgtttttctttattACT s panTro5.chr5 1829232 475 - 181907262 g-ccctggggtggaacccATGGCCCCCTCTGACTCCCAGGAGACCTGGCCAGCTGCAGTGGCCCCC-GTGGACCAGCA-GAGGGTCAAGAGAGGAGCTGACGT-GGAGGAGCCGAGGCCC-ACTGGGG--GCTCCTG-GAGAGTCCGTCCGCCTATGGACAGCAGCTCAGGGCTTCAGCTCCTT--CAGGAGAGGAAG--CACC-TCTTCCTAGACTGAGGCATCGTTTTGATT---------------------AAAAAAAAAAAAA--------GTTGATTTTTTTCACCTTGGTGTAAATTTTTGTTTGT-AACTATATGTTAGT-TGTGACAGTTACCAc-tatttgtt----------------tttcttttctttttacgtttttgaaattattta-tagagataggctcttgttacgttgcccaggctggtctcagactcctggcctcagtggtccttccaccttggcctcccgaagt--gctggtactgcaggtgtgagacgtggcacctggcctgtttttctttATTACC i panTro5.chr5 C 0 C 0 s panPan2.chr5 1781575 473 - 183735486 g-ccctggggtggaacccATGGCCCCCTCTGACTCCCAGGAGACCTGGCCAGCTGCAGCGGCCCCC-GTGGACCAGCA-GAGGGACAAGAGAGGAGCTGACGT-GGAGGAGCCGAGGCCC-ACTGGGG--GCTCCTG-GAGAGTCCGTCCGCCTATGGACAGCAGCTCAGGGCTTCAGCTCCTT--CAGGAGAGGAAG--CACC-TCTTCCTAGACTGAGGCATCGTTTTGATT-----------------------AAAAAAAAAAA--------GTTGATTTTTTTCACCTTGGTGTAAATTTTTGTTTGT-AACTATATGTTAGT-TGTGACAGTTACCAc-tatttgtt----------------tttcttttctttttacgtttttgaaattattta-tagagataggctcttgttacgttgcccaggctggtctcagactcctggcctcagtggtccttccaccttggcctcccgaagt--gctggtactgcaggtgtgagacgtggcacctggcctgtttttctttATTACC i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 67972 481 + 152767 G-CCCTGGAGTGGAACCCATGGCCTCCTCTGACTCCCAGGAGACCTGGCCAGCTGCAGCGGCCCCC-GTGGACCAGCA-GAGGGACAAGAGAGGAGCTGACGT-GGAGGAGCCGAGGCCC-ACTGGGG--GCTCCTG-GAGAGTCCGTCCGCCTGTGGACAGCAGCTCAGTTGTTCAGCTGCTT--CCGGAGAGGAAG--CACC-TCTTCCTAGACTGAGGCATCGTTTTGATT-------------------AAAAAAAAAAAAAAA--------GTTGATTTTTTTCACCTTGGTGTAAATTTTTGTTTGT-AACAATATGTTAGT-TGTCACAGTTACCAC-TAtttttt-----------cttttttttttttttttttACatttttgaaattattta-cagagatgggct-tcgttacgttgtccaggctggtctcagactcctggcctcagtggtcgtcccaccttggcctcccaaagt--gctgggactacaggtgtgagccgtggcacctggccTGTTTTTCTTTATTACT i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160306649 504 - 163208435 GCCCCTGGGGTGGAACCCATGGCCCCCTCTGACTCCCAGGAGACCTGGCCAGCTGCAGTGGCCCCC-GTGGACCAGCA-GAGGGACAAGAGAGGAGCTGACGT-GGAGGATCCGAGGCCC-CCTGGGG--GCTCCTG-GAGAGTCCATCCACCTATGCACAGCAGCTCAGGGCTTCAGCTGCTT--CCAGAGAGGAAG--CACC-TCTTCCTAGACTGAGGCATCGCTTTGGTaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa--------GTTGATTTTTTTCACCTCGGTGTAAATTTTTGTTTGT-AACAATAT----GT-TGTGACAGTTACCAC-TATTTGTT-----TTCCTTTCttttttttttttttttaacatttttgaaattattta-cagagatgggctctcgctacgttctccaggctggtctcagactcctggcctcagtggtcctcccaccttggcctcccgaagt--gctgggactacaggagtgagccgtggcacctggccTGTTTTTCTTTATTACT i nomLeu3.chr2 C 0 C 0 s macFas5.chr6 3776162 471 - 181584905 g-ccctggggtggaacccACGGCCCCCTCTGACTCCCAGGAGACCTGGCCAGCTGCAGCGGCCCCC-GCGGACCAGCA-GAGGGACAAGAGAGGAGCTGACGT-GGAGGAGCCGAGGCCC-ACTGGGG--TCTCCGG-GAGAGTCCGTCCGCCTGTGGACAGCAGCTCAGGGCTTCAGCTGCTT--CCGGAGAGGAAA--CACC-GCTCCCTAGACTGAGGCATCGTTCTGGTT----------------aaaaaaaaaaaaaaaaaa--------GTTGGTTTTTTTCACCTTCATGTAAATTTTTGTTTGT-AACAATATGTTAGT-TGTGACAGTTACCAC-TATTTGTT----------------TTT---------TTACatttttgaaattatttt-tagagatgggctttcgctatgttgcccaggctggtctcagactcctggcctcagtggtcctcccaccttggcctcccaaagt--gctgggactaccgctgtgagccatggcagctggccTGTTTTTCTTTATTACT i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3797021 489 + 4899514 g-ccctggggtggaacccACG--CCCCTCTGACTCCCAGGA-ACCTG--CCACTGCAGCAGCCCCCGGCGGACCAGCAGGAGGGACAAGAGAGGAGCTGACGTGGGAGGAGCCGAGGCCCAACTGGGGCTCTTCCGGTGAGAGTCCGTCCGCCTGTGGACAGCAGCTCAGGCTTTCAGCTGCTTCACTGGAGAGGAAAATCACCTGCTCCCT-GACTGAGGCATCGTTCTGGTT--------aaaaaaaaaaaaaaaaaaaaaaaaaa--------GTTGGTTTTTTC--ACTTCATGT-AATTTTTGTTTGTAAACAATATGTTAGTGTGTGACAGTTACCACTTATTTGTT----------------TTTA-----TTATTACATTTATTAAATTACtttattaggatgggctttcg-tatgttgcccaggctggtctcagactcct-gcctcagtggtcctccca-cttggcctcccagagtgggctgggactaccgctgtgagccatggcagctggccTGTTTTTCTTTATTact i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012001120v1 3521749 471 - 3647740 G-CCCTGGGGTGGAACCCACGGCCCCCTCTGACTCCCAGGAGACCTGGCCAGCTGCAGCGGCCCCC-GTGGACCAGCA-GAGGGACAAGAGAGGAGCTGACGT-GGAGGAGCCGAGGCCC-ACTGGGG--GCTCCGG-GAGAGTCCGTCCGCCTGTGGACAGCAGCTCAGGGCTTCATCTGCTT--CCGGAGAGGAAA--CACC-GCTCTCTAGACTGAGGCATCGTTCTGGTT--------------aaaaaaaaaaaaaaaaaaaa--------GTTGATTGTTTTCACCTTCGTGTAAATTTTTGTTTGT-AACAATATGTTAGT-TGTGACAGTTACCAC-TATTTGTT----------------TTt---------tt--ttttttttaattatttt-tagagatgggctttcgctatgttgcccaggctgatctcagacccctggcctcagtggtcctcccaccttggcctcccaaagt--gctgggactacaggtgtgagccatggcagctggtcTGTTTTTCTTTATTact i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79656209 477 + 82825804 G-CCCTGGGGTGGGACCCATGGCCCCCTGTGACTCCCAGGAGACCTGGCCAGCTGCAGCGGCCCCC-GTGGACCAGCA-GAGGGACAAGAGAGGAGCTGACGT-GGGGGAGCCGAGGCCC-ACTGGGG--GCTCCTG-GAGAGTCCGTCCGCCTGTGGACAGCAGCTCAGGGCTTCAGCTGCTT--CCGAAGAGGAAA--CACC-TCTCCCTAGACTGAGGCATCATTCTGGTa------------aaaaaaaaaaaaaaaaaaaaaaaaaaaaaGGTTGATTTTTTTCACCTTCGTGTAAATTTTTGTTTGT-AACAATATGTTAGT-TGTGACAGTTACCAC-TATTTTTT----------------TTT--------------Tttttgaaattatttt-tagagatgggctttcgctatgttgcccaggctggtctcagactcctggcctcagtggtcctcccaccttggcctcccaaagt--gctgggactacaggtgtgagccgtggcagctggccTGTTTTTCTTTA-AACC i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1616948 475 - 1768974 g-ccctggggtggaacccACGGCCCCCTCTGACTCCCAGGAGACCTGGCCAGCTGCAGCGGCCCCC-GTGGACCAGCA-GAGGGACAAGAGAGGAGCTGACGT-GGAGGAGCCGAGGCCC-ACTGGGG--GCTCCGG-GAGAGTCCGTCCGCCTGTGGACAGCAGCTCGGGGCTTCAGCTGCTT--CCGGAGAGGAAA--CACC-GCTCCCTAGACTGAGGCATCGTTCTGGTT------------AAAAAAAATAAAATAAAATAAA--------GTTGGTTTTTTTCACCTTCATGTAAATTTTTGTTTGT-AACAATATGTTAGT-TGTGACAGTTACCAC-TATTTTTT----------------TTT--------TTTACatttttgaaattatttt-tagagatgggctttcactatgttgcccaggctggtctcagactcctggcctcagtggtcctcccaccttggcctcccaaagt--gctgggactacaggtgtgagccgtggcagctggccTGTTTTCCTTTA-TACT i manLeu1.NW_012103876v1 C 0 C 0 e rheMac8.chr6 3588707 2715 - 180051392 I e colAng1.NW_012117422v1 100650 3865 - 815015 M a score=678854.000000 s hg38.chr5_KI270795v1_alt 89382 146 + 131892 ACAGATATTATCTGAAGCTTTAAAGCCTCCTGGAGTGAAAGCTAGTTCATAACCACGCTGTTTGGAGCGAAGAAAACTACCTGGAATTCTTGTTCTCCAAAGATATGGAATT---ATCCCAGCAACAGCCGTCCTTCACTGCTCTGTCC s panTro5.chr5 1829707 146 - 181907262 ACAGATATTATATGGAGCCTTAAAGCCTCCTGGAGTGAGAGCTAGTTCATAACCATGCTGTTTGGAGAGAAGAAAACTACCTGGAATTCTTGTTCTCCAAAGATGTGGAATTATCATCCCAACAACAGCCGTCCTTCA---CTCTGTCC i panTro5.chr5 C 0 C 0 s panPan2.chr5 1782048 146 - 183735486 ACAGATATTATATGGAGCCTTAAAGCCTCCTGGAGTGAGAGCTAGTTCATAACCATGCTGTTTGGAGAGAAGAAAACTACCTGGAATTCTTGTTCTCCAAAGATGTGGAATTATCATCCCAACAACAGCCGTCCTTCA---CTCTGTCC i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 68453 146 + 152767 ACAGATATTATCTGAAGCTTTAAAGCCTCCTGGAGTGAAAGCTAGTTCATAACCACGCTGTTTGGAGGGAAGAAAACTACCTGGAATTCTTGTTCTCCAAAGATATGGAATT---ATCCCAGCAACAGCCGTCCTTCGCTGCTCTGTCC i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160307153 149 - 163208435 ACAGGTATTATATGGAGCCTTAAAGCCTCCTGGAGTGAGAGCTAGTTCATAACCACGCTGTTTGGAGGGAAGAAAACTACCTGGAATTCTTGTTCTCCAAAGATGTGGAATTATCATCCCAGCAACAGCCATCCTTCGCTGCTCTGTCC i nomLeu3.chr2 C 0 C 0 s macFas5.chr6 3776633 146 - 181584905 ACAGATATTATATGGAGCCTTAAAGCCTCCTGGAGTGAGAGCTAGTTCATAACCACGCTGTTTGGAGAGAAGAGAACTAGCTGGAATTCTTGTTCTCCAAAGATGTGGAATTATCATCCCAACAACAGCCATCCCTCG---CTCTGTCC i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3797510 146 + 4899514 acagatattatatggagccttaaagcctcctggagtgagagctagttcataaccacgctgTTTGGAGAGAAGAGAACTAGCTGGAATTCTTGTTCTCCAAAGATGTGGAATTATCATCCCAACAACAGCCGTCCCTCG---CTCTGTCC i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012001120v1 3522220 146 - 3647740 acagatattatatggagccttaaagcctcctggagtgagagctagttcataaccacgctgTTTGGAGAGAAGAGAACTACCTGGAATTCTTGTTCTCCAAAGATGTGGAATTGTCATCCCAACAACAGCCGTCCCTCG---CTCTGTCC i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79656686 146 + 82825804 ACAGATGTTATCTGAAGCTTTAAAGTCTCCTGGAGTGAGAGCTAGTTCATAACCACGCTGTTTGGAGAGAAGAGAACTACCTGGAATTCTTGTTCTCCAAAGATGTGGAATTATCATCCCAACAACAGCCGTCCCTCG---CTCTGTCC i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1617423 146 - 1768974 ACAGATGTTATCTGAAGCTTTAAAGCCTCCTGGAGTGAGAGCTAGCTCATAACCACGCTGTTTGGAGAGAAGAGAACTACCTGGAATTCTTGTTCTCCAAAGATGTGGAATTATCATCCCAACAACAGCCGTCCCTCG---CTCTGTCC i manLeu1.NW_012103876v1 C 0 C 0 s colAng1.NW_012117422v1 104515 146 - 815015 ACAGATGTTATCTGAAGCTTTAAAGCCGCCTGGAGTGAGAGCTAGTTCATAACCACGCTGTTTGGAGAGAAGAGAACTACCTGGAATTCTTGTTCTCCAAAGACGTGGAATTACTATCCCAACAACAGCCGTCCCTTG---CTCTGTCC i colAng1.NW_012117422v1 M 3865 C 0 e rheMac8.chr6 3588707 2715 - 180051392 I a score=3276.000000 s hg38.chr5_KI270795v1_alt 89528 1 + 131892 T s gorGor5.CYUI01000356v1 68599 1 + 152767 T i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160307302 1 - 163208435 T i nomLeu3.chr2 C 0 C 0 s macFas5.chr6 3776779 1 - 181584905 T i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3797656 1 + 4899514 T i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012001120v1 3522366 1 - 3647740 T i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79656832 1 + 82825804 T i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1617569 1 - 1768974 T i manLeu1.NW_012103876v1 C 0 C 0 s colAng1.NW_012117422v1 104661 1 - 815015 T i colAng1.NW_012117422v1 C 0 C 0 e rheMac8.chr6 3588707 2715 - 180051392 I e panPan2.chr5 1782194 0 - 183735486 C e panTro5.chr5 1829853 0 - 181907262 C a score=53229.000000 s hg38.chr5_KI270795v1_alt 89529 12 + 131892 GAGGACCCTCAG s panTro5.chr5 1829853 12 - 181907262 GGGGGCCTTCAG i panTro5.chr5 C 0 I 51 s panPan2.chr5 1782194 12 - 183735486 GGGGGCCTTCAG i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 68600 12 + 152767 GAGGACCCTCAG i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160307303 12 - 163208435 GAGGACCCTCAG i nomLeu3.chr2 C 0 C 0 s macFas5.chr6 3776780 12 - 181584905 GAGGAGCCTCAG i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3797657 12 + 4899514 GAGGAGCCTCAG i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012001120v1 3522367 12 - 3647740 GAGGACCCTCAG i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79656833 12 + 82825804 GAGGACCCTCAG i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1617570 12 - 1768974 GAGGACCCTCAG i manLeu1.NW_012103876v1 C 0 C 0 s colAng1.NW_012117422v1 104662 12 - 815015 GAGGACCCTCAG i colAng1.NW_012117422v1 C 0 C 0 e rheMac8.chr6 3588707 2715 - 180051392 I a score=69449.000000 s hg38.chr5_KI270795v1_alt 89541 14 + 131892 GTGTGGCCCATCCA s panTro5.chr5 1829916 14 - 181907262 GTGTGGCCCATCCA i panTro5.chr5 I 51 C 0 s panPan2.chr5 1782206 14 - 183735486 GTGTGGTCCATCCA i panPan2.chr5 C 0 T 18 s gorGor5.CYUI01000356v1 68612 14 + 152767 GTGTGGCCCATCCA i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160307315 14 - 163208435 GTGTGGGCCATCCA i nomLeu3.chr2 C 0 C 0 s macFas5.chr6 3776792 14 - 181584905 GTGTGGCCCATCCA i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3797669 14 + 4899514 GTGTGGCCCATCCA i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012001120v1 3522379 14 - 3647740 GTGTGGCCCATCCA i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79656845 14 + 82825804 GTGTGGCCCATCCA i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1617582 14 - 1768974 GTGTGGCCCATCCA i manLeu1.NW_012103876v1 C 0 C 0 s colAng1.NW_012117422v1 104674 14 - 815015 GTGTGGGCCATCCA i colAng1.NW_012117422v1 C 0 C 0 e rheMac8.chr6 3588707 2715 - 180051392 I a score=12452.000000 s hg38.chr5_KI270795v1_alt 89555 5 + 131892 GCCCC s panTro5.chr5 1829930 5 - 181907262 CCCCC i panTro5.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 68626 5 + 152767 GCCCC i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160307329 5 - 163208435 GCCCC i nomLeu3.chr2 C 0 C 0 s macFas5.chr6 3776806 5 - 181584905 CCCCC i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3797683 5 + 4899514 CCCCC i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012001120v1 3522393 5 - 3647740 CCCCC i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79656859 5 + 82825804 GTCCC i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1617596 5 - 1768974 CCCCC i manLeu1.NW_012103876v1 C 0 C 0 e rheMac8.chr6 3588707 2715 - 180051392 I e colAng1.NW_012117422v1 104688 0 - 815015 C e panPan2.chr5 1782220 18 - 183735486 T a score=40263.000000 s hg38.chr5_KI270795v1_alt 89560 68 + 131892 TCAGTGTTTACCTCTGTCCTAAGGACTCTCAGGTGTGGGCGATCCAGCCCCTTAGTG-TTTCCCTCTGT s panTro5.chr5 1829935 68 - 181907262 TCAGTGTTTTCCTCTGTCCTGAGGGTGCTCAGGTGTGGCCCATCCACCCCCTCAGTG-TTTCCCTCTGT i panTro5.chr5 C 0 I 51 s gorGor5.CYUI01000356v1 68631 68 + 152767 TCAGTGTTTACCTCTGTCCTAAGGACTCTCAGGTGTGGGCGATCCAGCCCCTTAGTG-TTTCCCTCTGT i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160307334 68 - 163208435 TTGGTGTTTCCCTCTGTTTTGGAGATCCTCAGGTGTGGGCCATCCAGCCCCTTGGTG-TTTCCCTCTGT i nomLeu3.chr2 C 0 C 0 s macFas5.chr6 3776811 17 - 181584905 ---------------------------------------------------TCAGTG-TTTCCCTCTGT i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3797688 17 + 4899514 ---------------------------------------------------TCAGTG-TTTCCCTCTGT i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012001120v1 3522398 18 - 3647740 ---------------------------------------------------TCAGTGTTTTCCCTCTGT i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79656864 17 + 82825804 ---------------------------------------------------TTAGTA-TTTCCCTCTGT i chlSab2.chr23 C 0 C 0 s colAng1.NW_012117422v1 104688 22 - 815015 ----------------------------------------------TTCCCTTAGTG-TTTCCCTCTGT i colAng1.NW_012117422v1 C 0 C 0 e rheMac8.chr6 3588707 2715 - 180051392 I e manLeu1.NW_012103876v1 1617601 0 - 1768974 C e panPan2.chr5 1782220 18 - 183735486 T a score=217988.000000 s hg38.chr5_KI270795v1_alt 89628 78 + 131892 TTTGGAGATCCTCAGGTATGGTC----AATCCTATTAGTGTTTTCCTTTGTACTGGGGATGCTCAGGTGTGATCTATCCATC s panTro5.chr5 1830054 82 - 181907262 CCTGAGGATGCTCAGGTGTGGCCCATGAATCCCCTCAGTGTTTCCCTCTGTCCTGAGGATGCTCAGGTGTGGCCCATCCATC i panTro5.chr5 I 51 T 123 s gorGor5.CYUI01000356v1 68699 78 + 152767 TTTGGAGATCCTCAGGTATGGTC----AATCCTATTAGTGTTTTCCTTTGTACTGGGGATGCTCAGGTGTGATCTATCCATC i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160307402 78 - 163208435 TTTGGAGATCCTCAGGTGTGGTC----AATCCTATTAGTGTTTTCCTTTGTACTGGGGATGCTCAGCTGTGATCCATCCATC i nomLeu3.chr2 C 0 C 0 s macFas5.chr6 3776828 77 - 181584905 TTTGGAGGTCCTCAGGTGTGGTC----CATCCTATTAGTGCTTTCCT-TGTACTGGGGATGCTCAGGTGTGATCCATCCATC i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3797705 77 + 4899514 TTTGGAGGTCCTCAGGTGTGGTC----CATCCTATTAGTGCTTTCCT-TGTACTGGGGATGCTCAGGTGTGATCCATCCATC i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012001120v1 3522416 77 - 3647740 TTTGGAGATCCTCAGGTGTGGTC----CATCCTATTAGTGCTTTTCT-TGTACTGGGGATGCTCAGGTGTGATCCATCCATC i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79656881 77 + 82825804 TTTGGAGGTCCTCAGGTATGGTC----AATCCTATTAGTGCTTTCCT-TGTGCTGGGGATGCTCAGGTGTGATCCATCCATC i chlSab2.chr23 C 0 C 0 s colAng1.NW_012117422v1 104710 77 - 815015 TTTGGAGATCCTCAGGTATGGTC----AATCCTATTAGTGCTTTCCT-TGCACTGGGGATGCTCAGGTGTGATCCATCCATC i colAng1.NW_012117422v1 C 0 C 0 e rheMac8.chr6 3588707 2715 - 180051392 I e manLeu1.NW_012103876v1 1617601 0 - 1768974 C e panPan2.chr5 1782220 18 - 183735486 T a score=109563.000000 s hg38.chr5_KI270795v1_alt 89706 48 + 131892 TTCTCAGTGTTTTACCTCGTTCCTGGAGACCCTCAGGTTCCATCCATC s gorGor5.CYUI01000356v1 68777 48 + 152767 TTCTCAGTGTTTTACCTCTTTCCTGGAGACCCTCAGGTTCCATCCATC i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160307480 48 - 163208435 TTCTCAGTGTTTTACCTCTTTCCTGGAGACCCTCAGGTCCCATCCATC i nomLeu3.chr2 C 0 C 0 s macFas5.chr6 3776905 48 - 181584905 TTGTTAGTGTTTTACGTCTTTCCTAGAGACCCTCAGGTGCCATCCATC i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3797782 48 + 4899514 TTGTTAGTGTTTTACGTCTTTCCTAGAGACCCTCAGGTGCCATCCATC i macNem1.NW_012020287v1 C 0 I 23 s cerAty1.NW_012001120v1 3522493 48 - 3647740 TTGTTAGTGTTTTACGTCGTTCCTAGAGACCCTCAGGTGCCATCCATC i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79656958 48 + 82825804 TTCTTAGTGTTTTACACCGTTCCTAGAGACCCTCAGGTGCCATCCATC i chlSab2.chr23 C 0 C 0 s colAng1.NW_012117422v1 104787 48 - 815015 TTCTTAGTGTTTTACGTCTTTCCTAGAGACCCTCAGGTGCCATCCATC i colAng1.NW_012117422v1 C 0 C 0 e rheMac8.chr6 3588707 2715 - 180051392 I e manLeu1.NW_012103876v1 1617601 0 - 1768974 C e panPan2.chr5 1782220 18 - 183735486 T e panTro5.chr5 1830136 123 - 181907262 T a score=3819.000000 s hg38.chr5_KI270795v1_alt 89754 23 + 131892 CATCCAATTGGTTTTTACCTCTG- s gorGor5.CYUI01000356v1 68825 13 + 152767 CATCCAATTGGTT----------- i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160307528 23 - 163208435 CATCCAATTGGTTTTTACCTCTG- i nomLeu3.chr2 C 0 C 0 s macFas5.chr6 3776953 23 - 181584905 -ATCCCATTAGTGTTTTTCCGTGA i macFas5.chr6 C 0 C 0 e cerAty1.NW_012001120v1 3522541 0 - 3647740 C e macNem1.NW_012020287v1 3797830 23 + 4899514 I e rheMac8.chr6 3588707 2715 - 180051392 I e colAng1.NW_012117422v1 104835 0 - 815015 C e manLeu1.NW_012103876v1 1617601 0 - 1768974 C e chlSab2.chr23 79657006 0 + 82825804 C e panPan2.chr5 1782220 18 - 183735486 T e panTro5.chr5 1830136 123 - 181907262 T a score=906544.000000 s hg38.chr5_KI270795v1_alt 89777 482 + 131892 TCCTGGAGACCCTGAGGTGTGGTCTATCCATCCCATTAGTGTTTACCTCTGTCCTGGGGACCCTCAGTTGTGGTCAATCCATCCCATTAGTGTTTTTCCATTGTCCTCGAGACTCTCAGGTGTGGTCTATCCGTCCCATTAGTGTTTACATCTATCCTGGGAACCCTTAGGTGTGGTCCATCCATTTCTTTAGTGTTTACCTCTGCCTTGGGCCCCTCAGATGTGGTCGATCCCCAAAGTGTTTTATCTCTATTCTGGGGAATCTCAGTTGTGGTTCATCCATCCGCTTAGTGTTTACCTCTGTCCTGGGGACCCTGAGGTGTGGCCCATCCCCTTATTGTTTACCTTTGTCCTGGGGGCCCTCAGATATGGCCCATCCATCCCCTGAGTGTTTTACCTCGGTCCTCGAGACCCTCAGGTGTGGTCTATTAA----TTTAGTGTTTACTGCACCCTGGGGACTCACAGGTTTGGTCTATCCCAATA s gorGor5.CYUI01000356v1 68838 440 + 152767 -----------------------------------------TTTACCTCTGTCCTGGGGACCCTCAGTTGTGGTAAATCCATCCCATTAGTGTTTTTCCATTGTCCTCGAGACTCTCAGGTGTGGTCTATCCGTCCCATTAGTGTTTATGTCTATCCTGGGAACCCTTAGGTGTGGTCCATCCATTTCTTTAGTGTTTACCTCTGCCTTGGG-CCCTCAGATGTGGTCGATCCCCAAAGTGTTTTATCTCTATTCTGGGGAATCTCAGTTGTGGTTCATCCATCCGCTTAGTGTTTACCTCTGTCCTGGGGACCCTGAGGTGTGGCCCATCCCCTTATTATTTACCTTTGTCCTGGGGGCCCTCAGATATGGCCCATCCATCCCCTGAGTGTTTTACCTCGGTCCTCAAGACCCTCAGGTGTGGTTTATTAA----TTTAGTGTTTACCTCACCCTGGGGACTCACAGGTTTGGTCTATCCCAATA i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160307551 486 - 163208435 TCCCGGGGACCCTCAGGTGTGGTCAATCCATCCCATTCGTGTTTACCTCTGTCCTGGGGACCCTCAGGTGTGGTCCATCCATCACATTAGTGGTTTTCCATCGTCCTCGAGACTCTCAGGTGTGGTCTATCCGTCCCATTAGTGTTTACATCGATCCTGGGAACCGTCAAGTGTGGTCCATCCATTTCTTTAGTGTTTACCTCTGCCTTGGGCCTCTCAGATGTGGTCGATCCCCAAAGTGTTTTATCTCTATTCTAGGGAACCTCAGTTGTGGTTCATCCATCCTCTTAGTGTTTTCCTCTGTCCTGGGGACCCTGAGGTGTGGCCCATCCCCTTAATGTTCACCTCTGTCCTGGGGGCCCTCAGATGTGGCCCATCCATCCCCTGAGTGTTTTGCCTCTGTCCTGGAGACCCTCAAGTGTGGTCTGTTAATCCCTTTAGTGTTTACCTCACTCTGGGGACTCATAGGTTTGGTTTATCCCAATA i nomLeu3.chr2 C 0 C 0 s macFas5.chr6 3776976 484 - 181584905 TCCTCGAGACCCTCAGGTGTGGTCCATCCATCCCATTAGTGTTTACCTCGGTCCTGGAGACCCTCAGGTGTGGTCCATCCATTTCATTAGTG-TTTACATCGATCCTGGGAACCCTCAGGTGTGGTCAATCCATCCCATTAGTGTTTACATCGATCCTGGGAACCCTCAGGTGTGGTCCATCCATTTCCTTAGCGTTTACTTCTGCCTTGGGACCCTCAGATGTGGTCGATCCCCAAAGCGTTTTATCTCTGTTCTGGGGACTCTCCGTTGTGGTTCATCCATCCTCTTAGTGTTTACCTCTGTCCCGGGGACCCTGAGGTGTGGCCCATCCCCTTAGTGTTTACCTTTGTCCTGGGGGCCTTCAGATGTGGCCCATCCATCCCCTCAGTGTTTTACCTCCATCCTCGAGACCCTCAGGTGT-GTCTATTAATTCCTTTAGTGTTTCCCTCATGCTGGGGACTCTCAGGTTTGGTCTATCCCAGTA i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3797853 484 + 4899514 TCCTCGAGACCCTCAGGTGTGGTCCATCCATCCCATTAGTGTTTACCTCGGTCCTGGAGACCCTCAGGTGTGGTCCATCCATTTCATTAGTG-TTTACATCGATCCTGGGAACCCTCAGGTGTGGTCAATCCATCCCATTAGTGTTTACATCAATCCTGGGAACCCTCAGGTGTGGTCCATCCATTTCCTTAGCGTTTACTTCTGCCTTGGGACCCTCAGATGTGGTCGATCCCCAAAGCGTTTTATCTCTGTTCTGGGGACTCTCCGTTGTGGTTCATCCATCCTCTTAGTGTTTACCTCTGTCCCGGGGACCCTGAGGTGTGGCCCATCCCCTTAGTGTTTACCTTTGTCCTGGGGGCCTTCAGATGTGGCCCATCCATCCCCTCAGTGTTTTACCTCCATCCTCGAGACCCTCAGGTGT-GTCTATTAATTCCTTTAGTGTTTACCTCATGCTGGGGACTCTCAGGTTTGGTCTATCCCAGTA i macNem1.NW_012020287v1 I 23 I 25 s cerAty1.NW_012001120v1 3522541 402 - 3647740 -----------------------------ATCCCATTAGTGTTTACCTCGGTCCTGGAGACCCTC----------------------------------------------------AGGTGTGGTCAATCCATCCCATTAGTGTTTACATCGATCCTGGGAACCCTCAGGTGTGGTCCATTCATTTCCTTAGTGTTTACCTCTGCCTTGGGACCCTCAGATGTGGTCGATCCCCAAAGTGTTTTATCTCTGTTCTGGGGACTCTCCGTTGTGGTTCATCCGTCCTCTTAGTGTTTACCTCTGTCCCGGGGACCCTGAGGTGTGGCCCATCCCCTTAGTGTTTACCTTTGTCCT--GGGCCCTCAGATGTGGCCCATCCATCCCCTTAGTGTTTTACCTCCATCCTCGAGACCCTCAGGTGT-GTCTATTAATTCCTTTAGTGTTTACCTCATGCTGGGGACTCTCAGGTTTGGTCTATCCCAGTA i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79657006 454 + 82825804 -----------------------------ATCCCATTAGTGTTTACCTCGGTCCTGGAGACCCTCAGGTGTGGTCAATTCATCCCATTAGTGTTTTTCCGTTATCCTCGAGACTCTCAGGTGTGGTCTATCCATCCCATTAGTGTTTACATCGATCCTGGGAACCCTCAGATGTGGTCCATCCATTTCCTTAGTGTTTACTTCTGCCATGGGACCCTCAGATGTGGTTGATCCCCAAAGTGTTTTATCTCTATTCTGGGGACTGTCAGTTGTGGTTCATCCATCCTCTTAGTGTTTACCTCTGTCCCGGGGACCCTGAGGTGTGGCCCATCCCCTTAGTGTTTACCTTTGTCCT--GGGCCCTCAGATGTGGCCCATCCATCCCCTTAGTGTTTTACCTCCATCCTCGAGACCCTCAGGTGT-GTCTATTAATTCCGTTAGTGTTTACCTCATGCTGGGGATTCTCAGGTTTGGTCTATCCCAATA i chlSab2.chr23 C 0 C 0 s colAng1.NW_012117422v1 104835 358 - 815015 -----------------------------ATCCCATTAGTGTTTACCTCGCTCCTGGAGACCCTCAGGTGTGGTCAATCCATCCCATTAGTGTTTTTCTGTGATCCTCGAGACTCTCAGGTGTGGTCTATCCATCCCATTAGTGTTTACATCGATCCTGGGAACCCTCAGGTGTGGTCCATCCATTTCCTTAGTGTTTACCTCTGCCTTGGGACCCTCAGATGTGGTAGATCCCCAAAGTGTTTTATCTCTATTCTGGGGACTCTCCGTTGTGGTTCATCCATCCTCTT--------------------------------------------------------------------------------------------------AGTGTTTTACCTCCATCCTCGAGACCCTCAGGTAT-GTCTATTAATTCGTTTAGTGTTTACCTCATGCTGGGGACTCTCAGGTTTGGTCTATCCCAATA i colAng1.NW_012117422v1 C 0 C 0 e rheMac8.chr6 3588707 2715 - 180051392 I e manLeu1.NW_012103876v1 1617601 0 - 1768974 C e panPan2.chr5 1782220 18 - 183735486 T e panTro5.chr5 1830136 123 - 181907262 T a score=33605.000000 s hg38.chr5_KI270795v1_alt 90259 26 + 131892 GGTTTTTT-ATGTCGGCCCTGGGAACT s gorGor5.CYUI01000356v1 69278 26 + 152767 GTTTTTTT-ATGTCGGCCCTGGGAACT i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160308037 25 - 163208435 G-TTTTTT-ATGTCGGCCCCGGGAACT i nomLeu3.chr2 C 0 C 0 s macFas5.chr6 3777460 25 - 181584905 --GTTTTTAATGTGTGTCCCGGGAACT i macFas5.chr6 C 0 C 0 s cerAty1.NW_012001120v1 3522943 24 - 3647740 --GTTTTT-ATGTGTGTCCCGGGAACT i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79657460 24 + 82825804 --GTTTTT-ATGTGTGCCCTGGGAACT i chlSab2.chr23 C 0 C 0 s colAng1.NW_012117422v1 105193 24 - 815015 --GTTTTT-ATGTGTGCCCTGGGAACT i colAng1.NW_012117422v1 C 0 C 0 e macNem1.NW_012020287v1 3798337 25 + 4899514 I e rheMac8.chr6 3588707 2715 - 180051392 I e manLeu1.NW_012103876v1 1617601 0 - 1768974 C e panPan2.chr5 1782220 18 - 183735486 T e panTro5.chr5 1830136 123 - 181907262 T a score=2800.000000 s hg38.chr5_KI270795v1_alt 90285 1 + 131892 C s panTro5.chr5 1830013 1 - 181907262 C i panTro5.chr5 T 123 T 153 s gorGor5.CYUI01000356v1 69304 1 + 152767 C i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160308062 1 - 163208435 C i nomLeu3.chr2 C 0 C 0 s macFas5.chr6 3777485 1 - 181584905 C i macFas5.chr6 C 0 C 0 s cerAty1.NW_012001120v1 3522967 1 - 3647740 C i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79657484 1 + 82825804 C i chlSab2.chr23 C 0 C 0 s colAng1.NW_012117422v1 105217 1 - 815015 C i colAng1.NW_012117422v1 C 0 C 0 e macNem1.NW_012020287v1 3798337 25 + 4899514 I e rheMac8.chr6 3588707 2715 - 180051392 I e manLeu1.NW_012103876v1 1617601 0 - 1768974 C e panPan2.chr5 1782220 18 - 183735486 T a score=61606.000000 s hg38.chr5_KI270795v1_alt 90286 23 + 131892 TCAGATGTGGCCCATCCATCCCG s panTro5.chr5 1829861 23 - 181907262 TCAGGTGTGGTCCATCCATCCCC i panTro5.chr5 T 153 C 0 s panPan2.chr5 1782202 23 - 183735486 TCAGGTGTGGTCCATCCATCCCC i panPan2.chr5 T 18 C 0 s gorGor5.CYUI01000356v1 69305 23 + 152767 TCAGATGTGGCCCATCCATCCCG i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160308063 22 - 163208435 TCAAGTGTGGCCCATCCA-CCCC i nomLeu3.chr2 C 0 C 0 s macFas5.chr6 3777486 23 - 181584905 TCAGGTGTGGTTCATCCACCCCC i macFas5.chr6 C 0 C 0 s cerAty1.NW_012001120v1 3522968 23 - 3647740 TCAGGTGTGGTTCATCCATCCCC i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79657485 23 + 82825804 TCAGGTGTGGTTCATCCATCCCC i chlSab2.chr23 C 0 C 0 s colAng1.NW_012117422v1 105218 23 - 815015 TCAGGTGTGGTTCATCCAGCTCC i colAng1.NW_012117422v1 C 0 C 0 e macNem1.NW_012020287v1 3798337 25 + 4899514 I e rheMac8.chr6 3588707 2715 - 180051392 I e manLeu1.NW_012103876v1 1617601 0 - 1768974 C a score=73614.000000 s hg38.chr5_KI270795v1_alt 90309 28 + 131892 TCAGTGTTTCCCTCTGTCCTGGGGTCAC s panTro5.chr5 1829884 28 - 181907262 TCAGTGTTTCCCGCTGTCCTGAGGATGC i panTro5.chr5 C 0 C 0 s panPan2.chr5 1782225 28 - 183735486 TCAGTGTTTCCCGCTGTCCTGAGGATGC i panPan2.chr5 C 0 T 51 s gorGor5.CYUI01000356v1 69328 28 + 152767 TCAGTGTTTCCCTCTGTCCTGGGGTCAC i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160308085 28 - 163208435 TCAGTGTTTCCCTCTGTCCTGGGGTCAC i nomLeu3.chr2 C 0 C 0 s macFas5.chr6 3777509 28 - 181584905 TCAGTGTGTCCCTCCAACCTTGGTAAGC i macFas5.chr6 C 0 C 0 s cerAty1.NW_012001120v1 3522991 28 - 3647740 TTAGTGTTTCCCGCCAACCTTGGTAAGC i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79657508 28 + 82825804 TTAGTGTGTCCCTCTGTCCCGGGAACTC i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1617601 28 - 1768974 TCAGTGTTTCCCTCTGTCCTGGGGACCC i manLeu1.NW_012103876v1 C 0 C 0 s colAng1.NW_012117422v1 105241 28 - 815015 TTAGTGTGTCCCGCTGTCCCGGGAACTC i colAng1.NW_012117422v1 C 0 C 0 e macNem1.NW_012020287v1 3798337 25 + 4899514 I e rheMac8.chr6 3588707 2715 - 180051392 I a score=16011.000000 s hg38.chr5_KI270795v1_alt 90337 4 + 131892 TCAA s panTro5.chr5 1829912 4 - 181907262 TCAG i panTro5.chr5 C 0 T 51 s panPan2.chr5 1782202 4 - 183735486 TCAG i panPan2.chr5 T 51 C 0 s gorGor5.CYUI01000356v1 69356 4 + 152767 TCAG i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160308113 4 - 163208435 TCAG i nomLeu3.chr2 C 0 C 0 s macFas5.chr6 3777537 4 - 181584905 TCAG i macFas5.chr6 C 0 C 0 s cerAty1.NW_012001120v1 3523019 4 - 3647740 TCAG i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79657536 4 + 82825804 TCAG i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1617629 4 - 1768974 TCAG i manLeu1.NW_012103876v1 C 0 C 0 s colAng1.NW_012117422v1 105269 4 - 815015 TCAG i colAng1.NW_012117422v1 C 0 C 0 e macNem1.NW_012020287v1 3798337 25 + 4899514 I e rheMac8.chr6 3588707 2715 - 180051392 I a score=77172.000000 s hg38.chr5_KI270795v1_alt 90341 21 + 131892 GTGTGGCCCATCCACCCCCTC s panTro5.chr5 1829865 21 - 181907262 GTGTGGTCCATCCATCCCCTC i panTro5.chr5 T 51 C 0 s panPan2.chr5 1782206 21 - 183735486 GTGTGGTCCATCCATCCCCTC i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 69360 21 + 152767 GTGTGGTCCATCCACCCCCTC i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160308117 21 - 163208435 CTGTGGCCCATCCATCCCCTC i nomLeu3.chr2 C 0 C 0 s macFas5.chr6 3777541 21 - 181584905 GTGTGGCCCATCCACCCCCTT i macFas5.chr6 C 0 C 0 s cerAty1.NW_012001120v1 3523023 21 - 3647740 GTGTGGTCCATCCATCCCCTC i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79657540 21 + 82825804 GTGTGGTTCATCCATCCCTTT i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1617633 21 - 1768974 GTGTGGCCCATCCACCCCCTC i manLeu1.NW_012103876v1 C 0 C 0 s colAng1.NW_012117422v1 105273 21 - 815015 GTGTGGTTCATCCATCCCTTC i colAng1.NW_012117422v1 C 0 C 0 e macNem1.NW_012020287v1 3798337 25 + 4899514 I e rheMac8.chr6 3588707 2715 - 180051392 I a score=40087.000000 s hg38.chr5_KI270795v1_alt 90362 26 + 131892 AGTG-TTTCCCTCG-GTCCTGAGGATGC s panTro5.chr5 1829886 26 - 181907262 AGTG-TTTCCCGCT-GTCCTGAGGATGC i panTro5.chr5 C 0 C 0 s panPan2.chr5 1782227 26 - 183735486 AGTG-TTTCCCGCT-GTCCTGAGGATGC i panPan2.chr5 C 0 T 51 s gorGor5.CYUI01000356v1 69381 26 + 152767 AGTG-TTTCCCTCG-GTCCTGAGGATGC i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160308138 26 - 163208435 AGTG-TTTCCCTCT-GTCCTGGGGTCAC i nomLeu3.chr2 C 0 C 0 s cerAty1.NW_012001120v1 3523044 27 - 3647740 AGTGTTTTCCCTCT-GTCCTGGGGACCG i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79657561 26 + 82825804 AGTG-TTTCCCTCCAATCTTGG-TAAGC i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1617654 24 - 1768974 AGTG-TTTCCCTCT-GTCCTGG--ACCC i manLeu1.NW_012103876v1 C 0 C 0 s colAng1.NW_012117422v1 105294 26 - 815015 AGTG-TTTCCCTCCCACCTTGG-TAAGC i colAng1.NW_012117422v1 C 0 C 0 e macNem1.NW_012020287v1 3798337 25 + 4899514 I e rheMac8.chr6 3588707 2715 - 180051392 I e macFas5.chr6 3777562 0 - 181584905 C a score=138894.000000 s hg38.chr5_KI270795v1_alt 90388 51 + 131892 TCAGGTGTGGCCCATCCAGCCCCTCAGTGTTTTCCTCGGTCCTGGGGATGC s panTro5.chr5 1829912 51 - 181907262 TCAGGTGTGGCCCATCCACCCCCTCAGTGTTTTCCTCTGTCCTGAGGGTGC i panTro5.chr5 C 0 T 102 s panPan2.chr5 1782202 51 - 183735486 TCAGGTGTGGTCCATCCATCCCCTCAGTGTTTCCCGCTGTCCTGAGGATGC i panPan2.chr5 T 51 T 51 s gorGor5.CYUI01000356v1 69407 51 + 152767 TCAGGTGTGGCCCATCCAGCCCCTCAGTGTTTTCCCCGGTCCTGGGGATGC i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160308164 51 - 163208435 TCAGCTGTGGCCCATCCATCCCCTTAGTGTTTTCCTCTGTCCTGGGGTCAC i nomLeu3.chr2 C 0 C 0 s cerAty1.NW_012001120v1 3523071 51 - 3647740 TCAGGTGTGGCCCATCCACCCCCTCAGTGTTTCCCTCTGTCCTGGGGACCG i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79657587 51 + 82825804 TCAGGTGTCGTCCACCCACCCCTTCAGTGCTTCCCTCTGTCCTGGGGCCAC i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1617678 51 - 1768974 TCAGGTGTGGCCCATCCACCCCCTCAGTGTTTCCCTCTGTCCTGGGGACCC i manLeu1.NW_012103876v1 C 0 C 0 s colAng1.NW_012117422v1 105320 51 - 815015 TCAGGTGTGGCTCACCCACCCCCTCAGTGTTTCCCTCTGTCCTGGGGACCC i colAng1.NW_012117422v1 C 0 C 0 e macNem1.NW_012020287v1 3798337 25 + 4899514 I e rheMac8.chr6 3588707 2715 - 180051392 I e macFas5.chr6 3777562 0 - 181584905 C a score=78402.000000 s hg38.chr5_KI270795v1_alt 90439 25 + 131892 TCAGGTGTGGTCCATCCATCCCCTC s panTro5.chr5 1829861 25 - 181907262 TCAGGTGTGGTCCATCCATCCCCTC i panTro5.chr5 T 102 C 0 s panPan2.chr5 1782202 25 - 183735486 TCAGGTGTGGTCCATCCATCCCCTC i panPan2.chr5 T 51 C 0 s gorGor5.CYUI01000356v1 69458 25 + 152767 TCAGGTGTGGTCCATCCAGCCCCTC i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160308215 25 - 163208435 TCAAGTGTGGTCCATCCATCCCCTC i nomLeu3.chr2 C 0 C 0 s cerAty1.NW_012001120v1 3523122 25 - 3647740 TCAGGTGTGGCCCATCCACCCCCTC i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79657638 25 + 82825804 TCAGATGTGGCCCATCCATCCCCTC i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1617729 25 - 1768974 TCAGGTGTGGCCCATCCATCCCCTC i manLeu1.NW_012103876v1 C 0 C 0 s colAng1.NW_012117422v1 105371 25 - 815015 TCGGGTGTGGTCCATCCACCCCCTC i colAng1.NW_012117422v1 C 0 C 0 e macNem1.NW_012020287v1 3798337 25 + 4899514 I e rheMac8.chr6 3588707 2715 - 180051392 I e macFas5.chr6 3777562 0 - 181584905 C a score=19148.000000 s hg38.chr5_KI270795v1_alt 90464 8 + 131892 AGTGTTTC s panTro5.chr5 1829886 8 - 181907262 AGTGTTTC i panTro5.chr5 C 0 C 0 s panPan2.chr5 1782227 8 - 183735486 AGTGTTTC i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 69483 8 + 152767 AGTGTTTT i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160308240 8 - 163208435 AGTGTTTT i nomLeu3.chr2 C 0 C 0 s cerAty1.NW_012001120v1 3523147 8 - 3647740 AGTGTTTC i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79657663 8 + 82825804 AGTGTTTC i chlSab2.chr23 C 0 C 0 s colAng1.NW_012117422v1 105396 8 - 815015 AGTGTTTT i colAng1.NW_012117422v1 C 0 C 0 e macNem1.NW_012020287v1 3798337 25 + 4899514 I e rheMac8.chr6 3588707 2715 - 180051392 I e macFas5.chr6 3777562 0 - 181584905 C e manLeu1.NW_012103876v1 1617754 0 - 1768974 C a score=44855.000000 s hg38.chr5_KI270795v1_alt 90472 27 + 131892 CCTCGGTCCTGAGGATGCTCAGGTGTG s panTro5.chr5 1829894 27 - 181907262 CCGCTGTCCTGAGGATGCTCAGGTGTG i panTro5.chr5 C 0 C 0 s panPan2.chr5 1782235 27 - 183735486 CCGCTGTCCTGAGGATGCTCAGGTGTG i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 69491 27 + 152767 CCTCGGTCCTGAGGATGCTCAGGTGTG i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160308248 27 - 163208435 CCTCTGTCCTGGGGATGCTCAGGTGTG i nomLeu3.chr2 C 0 T 12182 s cerAty1.NW_012001120v1 3523155 27 - 3647740 CCTCTGTCCTGGGGACCCTCAGGTGTG i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79657671 27 + 82825804 CCTCTATCCTGGGGACCCTCAGGTGTG i chlSab2.chr23 C 0 C 0 e macNem1.NW_012020287v1 3798337 25 + 4899514 I e rheMac8.chr6 3588707 2715 - 180051392 I e macFas5.chr6 3777562 0 - 181584905 C e colAng1.NW_012117422v1 105404 0 - 815015 C e manLeu1.NW_012103876v1 1617754 0 - 1768974 C a score=20539.000000 s hg38.chr5_KI270795v1_alt 90499 24 + 131892 GCCCATCCAGCCCCTCAGTGTTTT s panTro5.chr5 1829921 24 - 181907262 GCCCATCCACCCCCTCAGTGTTTT i panTro5.chr5 C 0 C 0 s panPan2.chr5 1782262 24 - 183735486 GCCCATCCACCCCCTCAGTGTTTC i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 69518 24 + 152767 GCCCATCCAGCCCCTCAGTGTTTT i gorGor5.CYUI01000356v1 C 0 C 0 s cerAty1.NW_012001120v1 3523182 24 - 3647740 GCCCATCCACCCCCTCAGCGTTTC i cerAty1.NW_012001120v1 C 0 C 0 e nomLeu3.chr2 160308275 12182 - 163208435 T e macNem1.NW_012020287v1 3798337 25 + 4899514 I e rheMac8.chr6 3588707 2715 - 180051392 I e macFas5.chr6 3777562 0 - 181584905 C e colAng1.NW_012117422v1 105404 0 - 815015 C e manLeu1.NW_012103876v1 1617754 0 - 1768974 C e chlSab2.chr23 79657698 0 + 82825804 C a score=15024.000000 s hg38.chr5_KI270795v1_alt 90523 17 + 131892 CCTCGGTCCTGGGGATG s panTro5.chr5 1829945 17 - 181907262 CCTCTGTCCTGAGGGTG i panTro5.chr5 C 0 C 0 s panPan2.chr5 1782286 17 - 183735486 CCTCTGTCCTGAGGATG i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 69542 17 + 152767 CCTCGGTCCTGGGGATG i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160296093 17 - 163208435 TCTCTATTCTGGGGAAC i nomLeu3.chr2 T 12182 C 0 s cerAty1.NW_012001120v1 3523206 17 - 3647740 CCTCCATCCTGGGGTCG i cerAty1.NW_012001120v1 C 0 C 0 e macNem1.NW_012020287v1 3798337 25 + 4899514 I e rheMac8.chr6 3588707 2715 - 180051392 I e macFas5.chr6 3777562 0 - 181584905 C e colAng1.NW_012117422v1 105404 0 - 815015 C e manLeu1.NW_012103876v1 1617754 0 - 1768974 C e chlSab2.chr23 79657698 0 + 82825804 C a score=33447.000000 s hg38.chr5_KI270795v1_alt 90540 20 + 131892 CTCAGGTGTGGTCCATCCAG s panTro5.chr5 1829962 20 - 181907262 CTCAGGTGTGGCCCATCCAC i panTro5.chr5 C 0 C 0 s panPan2.chr5 1782303 20 - 183735486 CTCAGGTGTGGCCCATCCAT i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 69559 20 + 152767 CTCAGGTGTGGCCCATCCAG i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160296110 20 - 163208435 CTCAGTTGTGGTTCATCCAT i nomLeu3.chr2 C 0 C 0 s macNem1.NW_012020287v1 3798362 20 + 4899514 CTCAGGTGTGGTTCATCCAC i macNem1.NW_012020287v1 I 25 C 0 s cerAty1.NW_012001120v1 3523223 20 - 3647740 CTCAGGTGTGGTCCATCCAC i cerAty1.NW_012001120v1 C 0 C 0 e rheMac8.chr6 3588707 2715 - 180051392 I e macFas5.chr6 3777562 0 - 181584905 C e colAng1.NW_012117422v1 105404 0 - 815015 C e manLeu1.NW_012103876v1 1617754 0 - 1768974 C e chlSab2.chr23 79657698 0 + 82825804 C a score=43239.000000 s hg38.chr5_KI270795v1_alt 90560 43 + 131892 CCCCTCAGTGTTTCCCTCGGTCCTGAGGATGCTCAGGTGTGGC s panTro5.chr5 1829982 43 - 181907262 CCCCTCAGTGTTTCCCTCTGTCCTGAGGATGCTCAGGTGTGGC i panTro5.chr5 C 0 C 0 s panPan2.chr5 1782323 43 - 183735486 CCCTTCAGAGTTTTCCTCTGTCCTGGGGATGCTCAGCTGTGGC i panPan2.chr5 C 0 C 0 s nomLeu3.chr2 160296130 43 - 163208435 CCTCTTAGTGTTTCCCTCTGTCCTAGGGACCCTGAGGTGTGGC i nomLeu3.chr2 C 0 I 11653 s macNem1.NW_012020287v1 3798382 43 + 4899514 CCCCTCAGTGTGTCCCTCCAACCTTGGTAAGCTCAGGTGTGGC i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012001120v1 3523243 43 - 3647740 CCCCTCAGTGTTTTCTTCTATCCTGGGGAAACTCAGGTGTGGC i cerAty1.NW_012001120v1 C 0 C 0 e rheMac8.chr6 3588707 2715 - 180051392 I e macFas5.chr6 3777562 0 - 181584905 C e colAng1.NW_012117422v1 105404 0 - 815015 C e manLeu1.NW_012103876v1 1617754 0 - 1768974 C e chlSab2.chr23 79657698 0 + 82825804 C e gorGor5.CYUI01000356v1 69579 0 + 152767 C a score=7199.000000 s hg38.chr5_KI270795v1_alt 90603 7 + 131892 CCATCCC s panTro5.chr5 1830025 7 - 181907262 CCATCCA i panTro5.chr5 C 0 C 0 s panPan2.chr5 1782366 7 - 183735486 CCACCCC i panPan2.chr5 C 0 T 153 s nomLeu3.chr2 160307826 7 - 163208435 TCATCCA i nomLeu3.chr2 I 11653 C 0 s macNem1.NW_012020287v1 3798425 7 + 4899514 CCATCCA i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012001120v1 3523286 7 - 3647740 CCATCCA i cerAty1.NW_012001120v1 C 0 C 0 e rheMac8.chr6 3588707 2715 - 180051392 I e macFas5.chr6 3777562 0 - 181584905 C e colAng1.NW_012117422v1 105404 0 - 815015 C e manLeu1.NW_012103876v1 1617754 0 - 1768974 C e chlSab2.chr23 79657698 0 + 82825804 C e gorGor5.CYUI01000356v1 69579 0 + 152767 C a score=6207.000000 s hg38.chr5_KI270795v1_alt 90610 8 + 131892 TCCCCTCA s panTro5.chr5 1830032 8 - 181907262 CCCCCTCA i panTro5.chr5 C 0 C 0 s panPan2.chr5 1782220 8 - 183735486 TCCCCTCA i panPan2.chr5 T 153 C 0 s nomLeu3.chr2 160307833 8 - 163208435 TCCTCTTA i nomLeu3.chr2 C 0 C 0 s macNem1.NW_012020287v1 3798432 7 + 4899514 CCCCCTT- i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012001120v1 3523293 8 - 3647740 CCCCCTCA i cerAty1.NW_012001120v1 C 0 C 0 e rheMac8.chr6 3588707 2715 - 180051392 I e macFas5.chr6 3777562 0 - 181584905 C e colAng1.NW_012117422v1 105404 0 - 815015 C e manLeu1.NW_012103876v1 1617754 0 - 1768974 C e chlSab2.chr23 79657698 0 + 82825804 C e gorGor5.CYUI01000356v1 69579 0 + 152767 C a score=61347.000000 s hg38.chr5_KI270795v1_alt 90618 44 + 131892 GTGTTTTCCTCGGTCCTGGGGATGCTCAGATGTGGCCCATCCAT s panTro5.chr5 1830040 44 - 181907262 GTGTTTCCCTCTGTCCTGAGGATGCTCAGGTGTGGCCCATGAAT i panTro5.chr5 C 0 C 0 s panPan2.chr5 1782228 44 - 183735486 GTGTTTCCCGCTGTCCTGAGGATGCTCAGGTGTGGCCCATCCAC i panPan2.chr5 C 0 C 0 s nomLeu3.chr2 160307841 40 - 163208435 GTGTTTTCCTCTGTCCTGGGGACCCTGAGGTGTGGCCCAT---- i nomLeu3.chr2 C 0 C 0 s macFas5.chr6 3777562 44 - 181584905 GTGTTTCCCTCGGTCCCGGGAACTCTCAGGTGTGGCCCATCCAC i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3798439 44 + 4899514 GTGTTTCCCTCGGTCCCGGGAACTCTCAGGTGTGGCCCATCCAC i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012001120v1 3523301 44 - 3647740 GTGTTTTCCTCTATCCTGGGGACCCTCACTTGTGGCCCATCCAC i cerAty1.NW_012001120v1 C 0 C 0 e rheMac8.chr6 3588707 2715 - 180051392 I e colAng1.NW_012117422v1 105404 0 - 815015 C e manLeu1.NW_012103876v1 1617754 0 - 1768974 C e chlSab2.chr23 79657698 0 + 82825804 C e gorGor5.CYUI01000356v1 69579 0 + 152767 C a score=15631.000000 s hg38.chr5_KI270795v1_alt 90662 6 + 131892 CCCCTC s panTro5.chr5 1830084 6 - 181907262 CCCCTC i panTro5.chr5 C 0 C 0 s panPan2.chr5 1782272 6 - 183735486 CCCCTC i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 69579 6 + 152767 CCCCTC i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160307881 6 - 163208435 CCCCTT i nomLeu3.chr2 C 0 C 0 s macFas5.chr6 3777606 6 - 181584905 CCCCTC i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3798483 6 + 4899514 CCCCTC i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012001120v1 3523345 6 - 3647740 CCCCTC i cerAty1.NW_012001120v1 C 0 C 0 e rheMac8.chr6 3588707 2715 - 180051392 I e colAng1.NW_012117422v1 105404 0 - 815015 C e manLeu1.NW_012103876v1 1617754 0 - 1768974 C e chlSab2.chr23 79657698 0 + 82825804 C a score=115872.000000 s hg38.chr5_KI270795v1_alt 90668 69 + 131892 AGTGTTTCCCTCGGTCCTGAGGATGCTCAGGTGTGGCCCATCCATCCCCTCAGTGTTTT-CCTCTGTCCT s panTro5.chr5 1830090 69 - 181907262 AGTGTTTCCCTCTGTCCTGAGGATGCTCAGGTGTGGCCCATCCATCCCTTCAGAGTTTT-CCTCTGTCCT i panTro5.chr5 C 0 C 0 s panPan2.chr5 1782278 69 - 183735486 AGTGTTTCCCTCTGTCCTGAGGATGCTCAGGTGTGGCCCATCCATCCCTTCAGAGTTTT-CCTCTGTCCT i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 69585 69 + 152767 AGTGTTTTCCTCGGTCCTGGGGATGCTCAGGTGTGGTCCATCCATCCCCTCAGTGTTTT-CCTCTGTCCT i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160307887 70 - 163208435 AATGTTCACCTCTGTCCTGGGGGCCCTCAGATGTGGCCCATCCATCCCCTGAGTGTTTTGCCTCTGTCCT i nomLeu3.chr2 C 0 C 0 s macFas5.chr6 3777612 69 - 181584905 AGTGTTTCCCTCTGTCCTGGGGACCCTCAGGTGTGGCCCATCCACCCCCTCAGTGTTTC-CCTCTGTCCT i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3798489 69 + 4899514 AGTGTTTCCCTCTGTCCTGGGGACCCTCAGGTGTGGCCCATCCACCCCCTCAGTGTTTC-CCTCTGTCCT i macNem1.NW_012020287v1 C 0 M 1645 e cerAty1.NW_012001120v1 3523351 0 - 3647740 C e rheMac8.chr6 3588707 2715 - 180051392 I e colAng1.NW_012117422v1 105404 0 - 815015 C e manLeu1.NW_012103876v1 1617754 0 - 1768974 C e chlSab2.chr23 79657698 0 + 82825804 C a score=18813.000000 s hg38.chr5_KI270795v1_alt 90737 17 + 131892 GGGGATGCTCAGGTGTG s panTro5.chr5 1830159 17 - 181907262 GGGGATGCTCAGCTGTG i panTro5.chr5 C 0 C 0 s panPan2.chr5 1782347 17 - 183735486 GGGGATGCTCAGCTGTG i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 69654 17 + 152767 GGGGATGCTCAGGTGTG i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160307957 17 - 163208435 GGAGACCCTCAAGTGTG i nomLeu3.chr2 C 0 I 301 s macFas5.chr6 3777681 17 - 181584905 GGGGACCCTCAGGTGTG i macFas5.chr6 C 0 C 0 e cerAty1.NW_012001120v1 3523351 0 - 3647740 C e macNem1.NW_012020287v1 3798558 1645 + 4899514 M e rheMac8.chr6 3588707 2715 - 180051392 I e colAng1.NW_012117422v1 105404 0 - 815015 C e manLeu1.NW_012103876v1 1617754 0 - 1768974 C e chlSab2.chr23 79657698 0 + 82825804 C a score=1155.000000 s hg38.chr5_KI270795v1_alt 90754 12 + 131892 TGTCCTGGGGAT s gorGor5.CYUI01000356v1 69671 12 + 152767 TGTCCTGGGGAT i gorGor5.CYUI01000356v1 C 0 C 0 e nomLeu3.chr2 160307974 301 - 163208435 I e cerAty1.NW_012001120v1 3523351 0 - 3647740 C e macNem1.NW_012020287v1 3798558 1645 + 4899514 M e rheMac8.chr6 3588707 2715 - 180051392 I e macFas5.chr6 3777698 0 - 181584905 C e colAng1.NW_012117422v1 105404 0 - 815015 C e manLeu1.NW_012103876v1 1617754 0 - 1768974 C e chlSab2.chr23 79657698 0 + 82825804 C e panPan2.chr5 1782364 0 - 183735486 C e panTro5.chr5 1830176 0 - 181907262 C a score=20956.000000 s hg38.chr5_KI270795v1_alt 90766 12 + 131892 GCCCATCCCCTT s panTro5.chr5 1830176 12 - 181907262 GCCCACCCCCTT i panTro5.chr5 C 0 C 0 s panPan2.chr5 1782364 12 - 183735486 GCCCACCCCCTT i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 69683 12 + 152767 GCCCATCCCCTT i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160308275 12 - 163208435 GCCCATCCCCTT i nomLeu3.chr2 I 301 C 0 s macFas5.chr6 3777698 12 - 181584905 GTCCACCCCCTC i macFas5.chr6 C 0 C 0 s chlSab2.chr23 79657698 12 + 82825804 GTCCATCCCCTT i chlSab2.chr23 C 0 C 0 e cerAty1.NW_012001120v1 3523351 0 - 3647740 C e macNem1.NW_012020287v1 3798558 1645 + 4899514 M e rheMac8.chr6 3588707 2715 - 180051392 I e colAng1.NW_012117422v1 105404 0 - 815015 C e manLeu1.NW_012103876v1 1617754 0 - 1768974 C a score=26280.000000 s hg38.chr5_KI270795v1_alt 90778 9 + 131892 AGTGTTTTA s panTro5.chr5 1830188 9 - 181907262 AGTGTTTTA i panTro5.chr5 C 0 C 0 s panPan2.chr5 1782376 9 - 183735486 AGTGTTTTA i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 69695 9 + 152767 AGTGTTTTA i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160308287 9 - 163208435 AGTGTTTTA i nomLeu3.chr2 C 0 C 0 s macFas5.chr6 3777710 9 - 181584905 AGTGTTTTT i macFas5.chr6 C 0 C 0 s cerAty1.NW_012001120v1 3523351 9 - 3647740 AGTGTTTTT i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79657710 9 + 82825804 AGTGTTTTA i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1617754 9 - 1768974 AGTGTTTTT i manLeu1.NW_012103876v1 C 0 C 0 e macNem1.NW_012020287v1 3798558 1645 + 4899514 M e rheMac8.chr6 3588707 2715 - 180051392 I e colAng1.NW_012117422v1 105404 0 - 815015 C a score=2541658.000000 s hg38.chr5_KI270795v1_alt 90787 679 + 131892 CCTCCAACTTTCTCTATT-------------------TTTTGTTTCCAGTCTTCCCACACAGGTTGAGAGAGGAGGGGATCCAATTGCCTGTGAGGAGGACACGGCTCCTGGGTGGACCCTGCAGATTGTGAAGTTCAAGTCACAGCTCCTGGGAAGGTCTCTGTGTGTAAAGATCGTGGGGGTGAGACAGATTCAGGGACCACACTCTGCTCTGCTCTGTACCTCTGAGTGTCAATC----CAGCTGCCTTGTGACCAGGACACTTAGAAGAAGCATGGACCCTGCAAGAGGGCAGGTTTGGAGAGTGAGATGAGCACGCTTGAGGGATTAACGTGTAACTTGAACCACTGCCTCGCAAACTACGTGAGGGCGTGCAGgtgtgtgtctgtgcgtgtgtgtgCTGGGGGGATGTTTAGCAGCCTCACGGAGGGGTAACTCACATACAAGAGAACAAggccaggcgtggtggctcacgcctgtaatcccagcactttgggaggctgaggtgggtggatcacgtgaggttaggagatcgagaccagcctgaccaacatggtgaaaccctgtctctactaaaaatataaaaaattagccaggtgtggtggtgcatgcctgtaatcccagctactctggaggctgaagcaggagaatcacttgaacccgggaggcggaga-ttgcagtgagccgagatcacgccact s panTro5.chr5 1830197 678 - 181907262 CCTCCCACGTTCTCTATT-------------------TTTTGTTGCCAATCTTCCCACACAGGTGGAGAGAGGAGGAGATCCCATTGCCTGTGAGGAGGACACGGCTCCTGGGTGGACCCTGCAGATTGTGAAGTTCAAGTCACAGCTCCTGGGAAGGTCTCTGTGTGTAAAGATTGTGGGGGTGAGATAGATTCAGGGACCACACTCTGCTCTGCTCTATATCTCTGAGTGTCGATC----CAGCTGCCTTGTGACCAGGACACTTGGAAGAACCATGGACCCTGCAAGAGGGCAGGTTCAGAGAGTGAGATGAGCACGCTTGAGGGATTAAAGTGTAACTTGAACCACTGCCTTGCAAACTGCGTGAGGGCATGCAGgtgtgtgtctgtgcgtgtgtgtgCTGGGAAGATGTTTAGCAGCCTCGTGGAGGGGTAACTGACATACAAGAGAACAAggccaggcatggtggctcacggc-gtaatcccagcactttgggaggccgaggtgggtgaatcacctgaggtcaggagttcgagaccagcctgaccaacacagtgaaactgcatctctactaaaactacaaaaaattagccaggcatggtggcgggcacctgtaatcccagctactctggaggctgaggcaggagaatcacttgaacccaggaggtggagg-ttgcagtgagccgagatcatgccact i panTro5.chr5 C 0 C 0 s panPan2.chr5 1782385 678 - 183735486 CCTCCCACGTTCTCTATT-------------------TTTTGTTGCCAATCTTCCCACACAGGTGGAGAGAGGAGGAGATCCCATTGCCTGTGAGGAGGACACGGCTCCTGGGTGGACCCTGCAGATTGTGAAGTTCAAGTCACAGCTCCTGGGAAGGTCTCTGTGTGTAAAGATTGTGGGGGCGAGATAGATTCAGGGACCACACTCTGCTCTGCTCTATATCTCTGAGTGTCGATC----CAGCTGCCTTGTGACCAGGACACTTGGAAGAACCATGGACCCTGCAAGAGGGCAGGTTCAGAGAGTGAGATGAGCACGCTTGAGGGATTAAAGTGTAACTTGAACCACTGCCTTGCAAACTGCGTGAGGGCATGCAGgtgtgtgtctgtgcgtgtgtgtgCTGGGAAGATGTTTAGCAGCCTCGTGGAGGGGTAACTGACATACAAGAGAACAAggccaggcatggtggctcacggc-gtaatcccagcactttgggaggccgaggtgggtgaatcacctgaggtcaggagttcgagaccagcctgaccaacacagtgaaaccgcatctctactaaaactacaaaaaattagccaggcatggtggcgggcacctgtaatcccagctactctggaggctgaggcaggagaatcacttgaacccaggaggtggagg-ttgcagtgagccgagatcatgccact i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 69704 675 + 152767 CCTCCACCTTTCTCTATT-------------------TTTTGTTTCCAATCTTCCCACACAGGTTGAGAGAGGAGGGGATCCAGTTGCCTGTGAGGAGGACACGGCTCCTAGGTGGACCCTGCAGATTATGAAGTTCAAGTCACAGCTCCTGGGAAGGTCTCTGCGTGTAAAGATCATGGAGGTGAGACAGATTCAGGGACCACACTCTGCTCTGCTCTATATCTCTGAGTGTCGATC----CAGCTGCCTTGTGACTAGGACACTTGGGAGAACCATGGACCCTGCAAGAGGGCAGGTTCGGAGAGTGAGATGAGCACGCTTGAGGGATTAGCGTGTAACTTGAACCACTGCCTTGCAAACTGCGTGAGGGCGTGCAGgtgtgtgtctgtgcgtgtgtgtgCTGGGAGGATGTTTAGCAGCCTCACGGAGGGGTAACT----CACAAGAGAACAAggccaggcgtggtggcttacacctgtaatcccagcactttgggaggccgaggtgggtggatcacctgaggtcaggagatcgagaccagcctgaccaacatggtgaaaccccgtctctactaaaaatataaaaaattagccaggtgtggtggtgcatgcctgtaatcccagctactctggaggctgaagcaggagaatcacttgaacccgggaggcggagg-ttgcagtgagccaagatcacgccact i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160308296 674 - 163208435 CCTCCCACGTTCTCTATT-------------------TTTTGTTGCCAATCTTCCCACACAGGTGGAGAGAGGAGGG--TCCCGTTGCCTGTGAGGAGGACGCGGCTCCTGGGTGGACCCTGCAGATTGTGAAGTTCAAGTCACAGCTCCTGGGAAGGTCTCTGTGTGTAAAGATGGTGGGGACGAGACAGATTCAGGGACCACACTCTGCTCTGCTCTGTACCTCTGAGTGTCGATC----CAGCTGCCTTGTGACCAGGACACTTGGAAGAACCATGGACCCTGCAAGAGGGCAGGTTCGGAGGGCGAGATGAGCACGCTTGAGGGATTAACAGGTAACTTGAACCACTGCCTTGCAAACTGCGTGAGGGTGTGCAGGTGTGTGTC----CGTGTGTGTGCTGGGAGGATGTTTAGCAGCCTCACGGAGGGGGAACTGACATACAAGAGAGCAAggccaggcgtggtggctcacgcctgtaatcccagcactttgggaggccgaggcaggtggatcacctgaggtcaggagatggagaccagcctgaccaacatggtgaaaccctgtctctactaaaaatataaaaaattagccaggcgtgatggtgggtgcctgtaatcccagctactctggaggctgaggcagaagaatcacttgaacccgggaggtggaggtttgcaatgagctgagatcatgccact i nomLeu3.chr2 C 0 I 106 s macFas5.chr6 3777719 669 - 181584905 CCTCCCACGTTCTCTATG-------------------TTTTGTTTCCAATCTTCCCACACAGGTGGAGAGAGGAGGGGATCCCATTGCCTGTGAGGAGGACACGGCTCCTGGGTGGGCCCTGCAGATTGTGAAGTTCAAGTCACAGCTCCTGGGAAGGTCTCTGTGTGTCAAGATCGTTGGGGTGAGACAGATGCAGGGACCACACTGTGCCCTGCTCTGTACCTCTGAGTGTTGATC----CAGCTGCTTTGTGACCAGGGCACTTGGAAGAACCATGGACCCTACAAGAGGGCAGGTTCGGAGAGCAAGATGAGCACACTTGAGGGATTAACGTGTAATTTGAACAACTGCCTTGCAAACTGCGTGACGGCGTGCAGGCGTGTGTC----------TGTGCCGGGAGGATGTTTAGcagcctcacggaggggtaactgacatacaagagaacaaggccaggcgtggtggctcacgcctgtaatcctggcactttgggaggacgaggcgggtggatcacttcaggtcaggagttcgagaccagcctgacaaacatggtgaaaccccgtctctactaaaaatacaaaaaattagccagacatagtggtgcatgcctgtaattccagctactctggaggctgaggcaggataatcacctgaatctgggaggcggagg-ttgcagtgagccgagatcacgctact i macFas5.chr6 C 0 C 0 s cerAty1.NW_012001120v1 3523360 679 - 3647740 CCTCCCACGTTCTCTATG-------------------TTTTGTTTCCAATCTTCCCACACAGGTGGAGAAAGGAGGGGATCCCATTGCCTGTGAGGAGGACACAGCTCCTGGGTGGGCCCTGCAGATTGTGAAGTTCAAGTCACAGCTCCTGGGAAGGTCTCTGTGTGTCAATATCATGGGGGCGAGACAGATGCAGGGACCACACTGTGCCCTGCTCTGTACCTCTGAGTGTTGATC----CAGCTGCTTTGTGACCAGGGCACTTGGAAGAACCATGGACCCTACAAGAGGGCAGGTTCGGAGAGCAAGATGAGCACACTTGAGGGATTAACGTGTAATTTGAACAACTGCCTTGCAAACTGCGTGAGGGCGTGCAGGCGTGTGTCTGTGCGTGTGTGTGCCGGGAGGATGTTTAGcagcctcacggaggggtaactgacatacaagagaacaaggccaggcgtggtggcttacgcctgtaatcccagcactttgggaggacgaggcgggtggatcacttcaggtcaggagttcgagaccagcctgacaaacatggtgaaaccccgtctctactaaaaatataaaaaattagccagacatggtggtgcatgcctgtaattccagctactctggaggctgaggcaggataatcacctgaatctgggaggcggagg-ttgcagtgagccgagattgcactact i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79657719 679 + 82825804 CCTCCCACCTTCTCTATT-------------------TTTTGTTTCTAATCTTCCCACACAGGTGGAGAGAGGAGGGGATCCCATTGCCTGTGAGGAGGACACGGCTCCTGGGTGGGCCCTGCAGATTGTGAAGTTCAAGTCACAGCTCCTGGGAAGGTTTCTATGTGTCAAGATCATGGGGGCGAGACAGATGCAGGGACCACACTGTGCCCTGCTCTGTACCTCTGAGTGTTGATC----CAGCTGCTTTGTGACCAGGACACTTAGAAGAACCATGGACCCTACAAGAGGGCAGGTTCAGAGAGCAAGATGAGCACACTTGAGGGATTAACGTGTAATTTGAACAACTGCCTTGCAAACTGCATGAGGGCGTGCAGgtgtgtgtctgtgcgtgtgtgtgCCGGGAGGATGTGTAGcagcttcacggaggggtaactgacacacaagagaacaaggccagccgtggtgacttacgcctgtaatcccagcactttgggaggacgaggcgggtggatcacttcaggtcaggagttcaagaccagcctgacaaacatggtgaaaccccgtctctactaaaaatacaaaaaattagccaggcatggtggtgcatgcctgtaatcccagctactctggaggctgaggcaggataatcacctgaacctgggaggcggagg-ttgcagtgagccgagatcgtggtact i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1617763 698 - 1768974 CCTCCCACGTTCTCTATTTTTTCCCACGTTCTCTATGTTTTGTTTCCAATCTTCCCACACAGGTGGAAAGAGGAGGGGATCCCATTGCCTGTGAGGAGGACACGGCTCCTGGGTGGGCCCTGCAGATTGTGAAGTTCAAGTCACAGCTCCTGGGAAGGTCTCTGTGTGTCAAGATCATGGGGGCGAGACAGATGCAGGGACCACACTCTGCCCTGCTCTGTACCTCTGAGTGTTGATC----CAGCTGCCTTGTGACCAGGGCACTTGGAAGAACCATGGACCCTACAAGAGGGCAGGTTCGGAGAGCAAGATGAGCACGCTTGAGGGATTAACGTGTAATTTGAACAACTGCCTTGCAAACTGCGTGAGGGCGTGCAGGCGTGTGTCTGTGCGTGTGTGTGCCGGGAGGATGTTTAGcagcctcacggaggggtaactgacatacaagagaacaaggccaggcgtggtggcttatgcctgtaatcctagcactttgggaggacgaggcgggtggatcacttcaggtcaggagttcgagaccagcctgacaaacatggtgaaaccccgtctctactaaaaatacaaaaaattagccagacatggtggtgcatgcctgtaattccagctactctggaggctgaggcaggataatcacctgaatctgggaggcggagg-ttgcagtgagccaagatcgcgctact i manLeu1.NW_012103876v1 C 0 C 0 s colAng1.NW_012117422v1 105404 683 - 815015 CCTCCCACCTTCTCTATG-------------------TTTTGTTTCCAATCTTCCCACACAGGTGGAGAGAGGAGGGGATCCCATTGCCTGTGAGGAGGACACGGCTCCTGGGTGGGCCCTGCAGATTGTGAAGTTCATGTCACAGCTCCTGGGAAGATCTCTGTGTGTCAAGATCATGGGGGCGAGACAGATGCAGGGACCACACTCTGCCCTGCTCTGTACCTCTGAGTGTTGATTGCTGCAGCTGCCTTGTGACCAGGACACTTAGAAGAACCGTAGATCCTGCAAGAGGGCAGGTTCGGAGAGCAAAATGAGCACACTTGAGGGATTAACGTGTAATTTGAACAACTGCCTTGCAAACTGCGTGAGGGCGTGCAGgtgtgtgtctgtgcgtgtgtgtgCCGGGAGGATGTTTAGcagcctcacggagaggtaactgacatacaagagaacaaggccaggcgtggtgtctcacgcctgtaatcccagcactttgggaggacgaggtgggtggatcacttcaggtcaggagttcgagaccagcctgacaaacatggtaaaaccccgtctctactaaaaatacaaaaaattagccaggcatggtggtgcatgcctgtaatcccagctactctggaggctgaggcaggttaatcacctgaacctgggaggcggagg-ttgcagtgagccgagatcgcactact i colAng1.NW_012117422v1 C 0 C 0 e macNem1.NW_012020287v1 3798558 1645 + 4899514 M e rheMac8.chr6 3588707 2715 - 180051392 I a score=120829.000000 s hg38.chr5_KI270795v1_alt 91466 40 + 131892 gcactccagcctgggcaacaagagtgaaactccatctcaa s panTro5.chr5 1830875 40 - 181907262 gcactccagcctgggcaacaagagcgaaactccatctcaa i panTro5.chr5 C 0 C 0 s panPan2.chr5 1783063 39 - 183735486 gcactccagcctgggcaacaagagcgaaactccatctc-a i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 70379 40 + 152767 gcactccagcctgggcaacaagagcgaaactccatctcaa i gorGor5.CYUI01000356v1 C 0 C 0 s macFas5.chr6 3778388 40 - 181584905 gcactccagcctgggaaacaagagtgaaactctatctcaa i macFas5.chr6 C 0 I 2 s cerAty1.NW_012001120v1 3524039 40 - 3647740 gcactccagcctgggcaacaagagtgaaactctatctcaa i cerAty1.NW_012001120v1 C 0 I 2 s chlSab2.chr23 79658398 38 + 82825804 gcactccagcctgggcaacaaaagtgaaactcta--tcaa i chlSab2.chr23 C 0 I 1 s manLeu1.NW_012103876v1 1618461 40 - 1768974 gcactccagcctgggcaacaagagtgaaactctatctcaa i manLeu1.NW_012103876v1 C 0 I 1 s colAng1.NW_012117422v1 106087 40 - 815015 gcactccagcctgggcaacaagagtgaaactctatctcaa i colAng1.NW_012117422v1 C 0 I 3 e nomLeu3.chr2 160308970 106 - 163208435 I e macNem1.NW_012020287v1 3798558 1645 + 4899514 M e rheMac8.chr6 3588707 2715 - 180051392 I a score=1340278.000000 s hg38.chr5_KI270795v1_alt 91506 353 + 131892 a--aaaaaaaaaTTTTTTtttgatcgatgttgacacacgtacgcacccgcaaaaccat------------gaccaggagcatcacgactcccaaagcttcctcgtgattctttggaatccctccctacagcccctcccacccc-ccccatcccaagcagccactgatttgctttctgtcacagtcagtagatttgcaatttccttaataccatgtCTGAGCCCAGTAGGCAAATACTTTCTTTTTATTGGGTGGACATTTTGT----GGCATGTTCAAGCTTTTGAATTCAGAGAGTGAGAGAATGAGAAAGAAAAGGCTGGTCTGGGTCACTCCTGGGAGGCCTGGCCCTAAGCACAGTGTGGCTCACGTG s panTro5.chr5 1830915 357 - 181907262 a--aaaaacaaa-TTTTTtttgatcaatgttgacacacgtacgcacccgcaaaaccat------------gaccaggagcatcacgactcccaaagcttcctcgtgattctttggaatccctccctacagcccctcccaccccaccccatcccaagcagccactgatttgctttctgtcacAGTCAGTAGATTTGCAATTTCCTTAATACCATTTCTGAGCCCAGGAGGCAAATACTTTCTTTTTATTGGGTGGACATTTTGTGGCAGGCATGTTCAAGCTTTTGAATTCAGAGAGTAAGAGGATGAGAAAGAAAAGGCTGGTCTGGGTCACTCCTGGGAGGCCTGGCCCTAAGCACAGTGTGGCTCACGTG i panTro5.chr5 C 0 C 0 s panPan2.chr5 1783102 357 - 183735486 a--aaaaacaaa-TTTTTtttgatcaatgttgacacacgtacgcacccgcaaaaccat------------gaccaggagcatcacgactcccaaagcttcctcgtgattctttggaatccctccctacagcccctcccaccccaccccatcccaagcagccactgatttgctttctgtcacAGTCAGTAGATTTGCAATTTCCTTAATACCATTTCTGAGCCCAGGAGGCAAATACTTTCTTTTTATTGGGTGGACATTTTGTGGCAGGCATGTTCAAGCTTTTGAATTCAGAGAGTAAGAGGATGAGAAAGAAAAGGCTGGTCTGGGTCACTCCTGGGAGGCCTGGCCCTAAGCACAGTGTGGCTCACGTG i panPan2.chr5 C 0 T 54 s gorGor5.CYUI01000356v1 70419 353 + 152767 aataaaaaaaaa-TTTTTtttgatcaatgttgacacacgtacgcacctgcaaaaccat------------gaccaggagcatcatgactcccagagcttcctcgtgattctttggaatccctccctacagcccctcccaccccaccccatcccaagcagccactgatttgc--tctgtcacAGTCAGTAGATTTGTAATTTCCTTAATACCATTTCTGAGCCCAGGAGGCAAATACTTTCTTTTTATTGGGTAGACCTTTCGT----GGCATGTTCAAGCTTTTGAATTCAGAGAGTGAGAGAATGAGAAAGAAAAGGCTGGTCTGGGTCACTCCTAGGAGGCCTGGACCTAAGCACAGTGTGGCTCACGTG i gorGor5.CYUI01000356v1 C 0 C 0 s rheMac8.chr6 3591422 365 - 180051392 a--aaaaaaaaaTTCTTTtttgatcagtgttaacacacgtacacacccgcaaaaccatgacaatagtcaagaccaagagcagcacgactcccaaagcttcctcgagcttctttggaatccctccctacag-ccctcccaccccaccccatcccaagcagccgctgatttgctttctgtcacAGTCAGTAGATTTGCAATTTCCTTAATACCATTTCTGAGCCCAGGAGGCAAATACTTTCTTTTTATCCAGTGGAACTTTCAT----GGCATGTGTAAGCTTTTGAATTCAGAGAGTGAGAGAATGAGAAAGAAAAGGCTGGTCTGGGTCACTCCTGGGAGGCCTGGCCCTAACCACAGTGTGGCTCACGTG i rheMac8.chr6 I 2715 C 0 s macFas5.chr6 3778430 365 - 181584905 a--aaaaaaaaattcttttttgatcagtgttaacacacgtacacacccgcaaaaccatgacaatagtcaagaccaagagcagcacgactcccaaagcttcctcgagcttctttggaatccctccctacag-ccctcccaccccaccccatcccaagcagccactgatttgctttctgtcacAGTCAGTAGATTTGCAATTTCCTTAATACCATTTCTGAGCCCAGGAGGCAAATACTTTCTTTTTATCCAGTGGAACTTTCAT----GGCATGCGTAAGCTTTTGAATTCAGAGAGTGAGAGAATGAGAAAGAAAAGGCTGGTCTGGGTCACTCCTGGGAGGCCTGGCCCTAACCACAGTGTGGCTCACGTG i macFas5.chr6 I 2 C 0 s cerAty1.NW_012001120v1 3524081 366 - 3647740 a--aaaaaaaatttcttttttgatcagtgttaacacacgtacacacctgcaaaaccatgacaatagtcaagaccaagagcagcacgactcccaaagcttcctcgagcttctttggaatccttctctacagcccctcccaccccaccccatcccaagcagccactgatttgctgtctgtcacAGTCAGTAGATTTGCAATTTCCTTAATACCATTTCTGAGCCCAGGAGGCAAATACTTTCTTCTTATTGGGTGGACCTTTCAT----GGCATATTTAAGCTTTTGAACTCAGAGGGTGAGAGAATGAGAAAGAAAAGGCTGGTCTTGGTCACTCCTGGGAGGCCTGGCCCTAACCACAGTGTGGCTCACGTG i cerAty1.NW_012001120v1 I 2 C 0 s chlSab2.chr23 79658437 366 + 82825804 a--aaaaaaatttttttttttgatcagtgttaacacatgtacacacctgcaaaaccacgacaatagtcaagaccaagagcagcacgactcccaaagcttcctcgagcttctttggaatccctccctacagcccctcccaccccaccccatcccaagcagccactgatttgctttctgtcacagtcagtagatttgcaatttcCTTAATACCATTTCTGAGCCCAGGAGGCAAATACTTTCTTTTTATTCGGTGGACCTTTCAT----GGCATATTTAAGCTTTTGAATTCAGAGAGTGAAAGAATGAGAAAGAAAAGGCTGGTCTGGGTCACTCCTGGGAGGCCTGGCCCTAACCACAGTGTGGCTCACGTG i chlSab2.chr23 I 1 C 0 s manLeu1.NW_012103876v1 1618502 366 - 1768974 a--aaaaaaaatttcttttttgatcagtgttaacacacgtacacacccgcaaaaccatgacaatagtcaagaccaagagcagcacgactcccaaagcttcctcgagcttctttggaatccctccctatggcccctcccaccccaccccatcccaagcagccactgatttgctttctgtcacAGTCAGTAGATTTGCAATTTCCTTAATACCATTTCTGAGCCCAGGAGGCAAATACTTTCTTTTTATCCAGTGGAACTTTCAT----GGCATGCGTAAGCTTTTGAATTCAGAGGGTGAGAGAATGAGAAAGAAAAGGCTGGTCTGGGTCACTCCTGGGAGGCCTGGCCCTAACCACAGTGTGGCTCATGTG i manLeu1.NW_012103876v1 I 1 C 0 s colAng1.NW_012117422v1 106130 366 - 815015 a--aaaaaaaattttttttttgattagcgttaacacacggacacacccgcaaaaccatgaccatagtcaagaccaagagcagcacgactcccaaagcttcctcgagcttctttggaatccctccctacagcccctgccaccccaccccatcccaagcagccactgatttgctttctgtcacAGTCAGTAGATTTGCAATTTCCTTAATACCATTTCTGAGCCCAGGAGGCAAATACTTTCTTTTTATTCAGTGGAACTTTCGT----GGCATGCGTAGGCTTTTGAACTCAGAGAGTGAGAGAATGAGAAAGAAAAGGCTGGTCTGGGTCACTCCTGGGAGACCTGGCCCTAACCACAGTGTGGCTCACGTG i colAng1.NW_012117422v1 I 3 C 0 e nomLeu3.chr2 160308970 106 - 163208435 I e macNem1.NW_012020287v1 3798558 1645 + 4899514 M a score=1082.000000 s hg38.chr5_KI270795v1_alt 91859 11 + 131892 CCCTGGAGCCC s gorGor5.CYUI01000356v1 70772 11 + 152767 CCCTGGAGCCC i gorGor5.CYUI01000356v1 C 0 C 0 e nomLeu3.chr2 160308970 106 - 163208435 I e cerAty1.NW_012001120v1 3524447 0 - 3647740 C e macNem1.NW_012020287v1 3798558 1645 + 4899514 M e rheMac8.chr6 3591787 0 - 180051392 C e macFas5.chr6 3778795 0 - 181584905 C e colAng1.NW_012117422v1 106496 0 - 815015 C e manLeu1.NW_012103876v1 1618868 0 - 1768974 C e chlSab2.chr23 79658803 0 + 82825804 C e panPan2.chr5 1783459 54 - 183735486 T e panTro5.chr5 1831272 0 - 181907262 C a score=1706.000000 s hg38.chr5_KI270795v1_alt 91870 53 + 131892 CTGGTCTGGGTCACTCCTGGGAGGCCTGGCCCTAAGCACCGTGTGGCTCACGT s panPan2.chr5 1783405 53 - 183735486 CTGGTCTGGGTCACTCCTGGGAGGCCTGGCCCTAAGCACAGTGTGGCTCACGT i panPan2.chr5 T 54 I 1 s gorGor5.CYUI01000356v1 70783 3 + 152767 -------------------------CTG------------------------- i gorGor5.CYUI01000356v1 C 0 C 0 e nomLeu3.chr2 160308970 106 - 163208435 I e cerAty1.NW_012001120v1 3524447 0 - 3647740 C e macNem1.NW_012020287v1 3798558 1645 + 4899514 M e rheMac8.chr6 3591787 0 - 180051392 C e macFas5.chr6 3778795 0 - 181584905 C e colAng1.NW_012117422v1 106496 0 - 815015 C e manLeu1.NW_012103876v1 1618868 0 - 1768974 C e chlSab2.chr23 79658803 0 + 82825804 C e panTro5.chr5 1831272 0 - 181907262 C a score=0.000000 s hg38.chr5_KI270795v1_alt 91923 1 + 131892 T e nomLeu3.chr2 160308970 106 - 163208435 I e cerAty1.NW_012001120v1 3524447 0 - 3647740 C e macNem1.NW_012020287v1 3798558 1645 + 4899514 M e rheMac8.chr6 3591787 0 - 180051392 C e macFas5.chr6 3778795 0 - 181584905 C e colAng1.NW_012117422v1 106496 0 - 815015 C e manLeu1.NW_012103876v1 1618868 0 - 1768974 C e chlSab2.chr23 79658803 0 + 82825804 C e gorGor5.CYUI01000356v1 70786 0 + 152767 C e panPan2.chr5 1783458 1 - 183735486 I e panTro5.chr5 1831272 0 - 181907262 C a score=580655.000000 s hg38.chr5_KI270795v1_alt 91924 154 + 131892 CCCTGGAGCCCCTGTGCACTGGACATCCCTGACTGCCCTGCCGCAAGCTTTATAGCTCCCCCATCACCTTTCCCGGACCAGCTGGTACAATCTCAAACTTTTCACCAATTCTGACATCTAAACAACTAACGCCAGAGACAGGCTCTGTGGGACC s panTro5.chr5 1831272 154 - 181907262 CCCTGGAGCCCCTGTGCACCGGACAGCCCTGACTGCCCTGCTGCAAGCTTTATAGCTCCCCCATCACCTTTCCTGGACCAGCTGGTACAATCTCAAACTTTTCACCAATTCTGACATCTAAACAACTAACGCCAGAGACAGGCTCTGTGGGACC i panTro5.chr5 C 0 C 0 s panPan2.chr5 1783459 154 - 183735486 CCCTGGAGCCCCTGTGCACCGGACAGCCCTGACTGCCCTGCTGCAAGCTTTATAGCTCCCCCATCACCTTTCCTGGACCAGCTGGTACAATCTCAGACTTTTCACCAATTCTGACATCTAAACAACTAACGCCAGAGACAGGCTCTGTGGGACC i panPan2.chr5 I 1 C 0 s gorGor5.CYUI01000356v1 70786 140 + 152767 --------------TGCACTGGACACCCCTGACTGCCCTGCTGCAAGCTTTATAGCTCCCCCATCACCTTTCCTGGACCAGCTGGTACAATCTCAAACTTTTCACCAATTCTGACATCTAAACAACTAACGCCAGAGACAGGCTCTGTGGGACC i gorGor5.CYUI01000356v1 C 0 C 0 s rheMac8.chr6 3591787 154 - 180051392 CCCTGGAGCCCCTGTGCACAGGACAGCCCTGACTGCCCATCTACAAGCTTTGTAGCTCCCCCATTACCTTTCCTGGACCAGCTGGGACAATCTCAAACTTTTCACCAATTCTGACATCTAAACAACTCATGCCAGAGACAGGCGCTGTGGAACC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3778795 154 - 181584905 CCCTGGAGCCCCTGTGCACAGGACAGCCCTGACTGCCCATCTACAAGCTTTGTAGCTCCCCCATTACCTTTCCTGGACCAGCTGGGACAATCTCAAACTTTTCACCAGTTCTGACATCTAAACAACTCATGCCAGAGACAGGCGCTGTGGAACC i macFas5.chr6 C 0 C 0 s cerAty1.NW_012001120v1 3524447 154 - 3647740 CCCTGGAGCCCCTGTGCACAGGAGAGCCCTGACTGCCCTTCTACAAGCTTTGTAGCTCCCTCATTACCTTTCCTGGACCAGCTGGGACAATCTCAAACTTTTCACCATTTCTGACATCTAAACAACTCATGCCAGAGACAGGCGCTGTGGAACC i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79658803 154 + 82825804 CCCTGGAGCCCCTGTGCACAGGACAGCCCTGACTGCCCTTCTGCAAGCTTTGTAGCTCCCCCATTACCTTTCCTGGACCAGCTGGTACAATCTCAAACTTTTCACCAATTCTGACATCTGAACAACTCATGCCAGAGACAGGCGCTGTGGAACC i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1618868 153 - 1768974 CCCTGGAGCCCCTGTGCACAGGACAGCCCTGACTGCCCTTCTACAAGCTTTGTAGCT-CCCCATTACCTTTCCTGGACCAGCTGGGACAATCTCAAACTTTTCACCAATTCTGACATCTAAACAACTCATGCCAGAGACAGGCGCTGTGGAACC i manLeu1.NW_012103876v1 C 0 C 0 s colAng1.NW_012117422v1 106496 154 - 815015 CCCTGGAGCCCCTGTGCACAGGACAGCCCTGACTGCTGTTCTACAAGCTTTGTAGCTCCCCCATTACCTTTCCTGGACCAGCTGGTACAATCTCAAACTTTTCACCAGTTCTGACATCTAAACAACTCATGCCAGAGACAGGCGCTGTGGAACC i colAng1.NW_012117422v1 C 0 C 0 e nomLeu3.chr2 160308970 106 - 163208435 I e macNem1.NW_012020287v1 3798558 1645 + 4899514 M a score=237453.000000 s hg38.chr5_KI270795v1_alt 92078 51 + 131892 AGCAGCTGCGACCTCACCTCCAGTCACTGGAACACTGAGCTGTTAAATGAA s panTro5.chr5 1831426 51 - 181907262 AGCAGCTGCGACCTCACCTCCGGTCACTGGAACACTGAGCTGTTAAATGAA i panTro5.chr5 C 0 C 0 s panPan2.chr5 1783613 51 - 183735486 AGCAGCTGCGACCTCACCTCCGGTCACTGGAACACTGAGCTGTTAAATGAA i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 70926 51 + 152767 AGCAGCTGCGACCTCACCTCCGGTCACTGGAACACTGAGCTGTTAAATGAA i gorGor5.CYUI01000356v1 C 0 C 0 s rheMac8.chr6 3591941 51 - 180051392 AGCAGGTGCGACCTCAGCTCCGGTCCCCGGAACACTGAGCTGTTAAACGAA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3778949 51 - 181584905 AGCAGGTGCGACCTCAGCTCCGGTCCCCGGAACACTGAGCTGTTAAACGAA i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3800203 51 + 4899514 AGCAGATGCGACCTCAGCTCCGGTCCCCGGAACACTGAGCTGTTAAACGAA i macNem1.NW_012020287v1 M 1645 C 0 s cerAty1.NW_012001120v1 3524601 51 - 3647740 AGCAGGTGCGACCTCACCTCCGGTCCCTGGAACACTGAGCTGTTAAATGAA i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79658957 51 + 82825804 AGCAGGTGCGACCTCACCTCCGGTCCCCAGAACACTGAGCTGTTAAACAAA i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1619021 51 - 1768974 AGCAGGTGCGACCTCACCTCCGGTCCCCGGAACACTGAGCTGTTAAACGAA i manLeu1.NW_012103876v1 C 0 C 0 s colAng1.NW_012117422v1 106650 51 - 815015 AGCAGGTGCGACCTCATCTTCGGTCCCCGGAACACTGAGCTGTTAAACGAA i colAng1.NW_012117422v1 C 0 C 0 e nomLeu3.chr2 160308970 106 - 163208435 I a score=42832.000000 s hg38.chr5_KI270795v1_alt 92129 13 + 131892 AGGTGCGTCCttt s panTro5.chr5 1831477 13 - 181907262 AGGTGCGTCCTTT i panTro5.chr5 C 0 C 0 s panPan2.chr5 1783664 13 - 183735486 AGGTGCGTCCTTT i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 70977 13 + 152767 AGGTGCGTCCCtt i gorGor5.CYUI01000356v1 C 0 I 2 s rheMac8.chr6 3591992 13 - 180051392 AGGTGCGTCCttt i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3779000 13 - 181584905 AGGTGCGTCCttt i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3800254 13 + 4899514 AGGTGCGTCCttt i macNem1.NW_012020287v1 C 0 C 0 s chlSab2.chr23 79659008 13 + 82825804 AGGTGCGTCtttt i chlSab2.chr23 C 0 C 0 s colAng1.NW_012117422v1 106701 13 - 815015 AGGTGCGTCCttt i colAng1.NW_012117422v1 C 0 C 0 e nomLeu3.chr2 160308970 106 - 163208435 I e cerAty1.NW_012001120v1 3524652 0 - 3647740 C e manLeu1.NW_012103876v1 1619072 0 - 1768974 C a score=32487.000000 s hg38.chr5_KI270795v1_alt 92142 17 + 131892 ttttttttttttttttt s gorGor5.CYUI01000356v1 70992 17 + 152767 ttttttttttttttttt i gorGor5.CYUI01000356v1 I 2 C 0 s rheMac8.chr6 3592005 17 - 180051392 ttttttttttttttttt i rheMac8.chr6 C 0 I 3 s macFas5.chr6 3779013 17 - 181584905 ttttttttttttttttt i macFas5.chr6 C 0 I 1 s macNem1.NW_012020287v1 3800267 17 + 4899514 ttttttttttttttttt i macNem1.NW_012020287v1 C 0 I 14 s chlSab2.chr23 79659021 17 + 82825804 ttttttttttttttttt i chlSab2.chr23 C 0 I 5 s colAng1.NW_012117422v1 106714 17 - 815015 ttttttttttttttttt i colAng1.NW_012117422v1 C 0 I 1 e nomLeu3.chr2 160308970 106 - 163208435 I e cerAty1.NW_012001120v1 3524652 0 - 3647740 C e manLeu1.NW_012103876v1 1619072 0 - 1768974 C e panPan2.chr5 1783677 0 - 183735486 C e panTro5.chr5 1831490 0 - 181907262 C a score=93613.000000 s hg38.chr5_KI270795v1_alt 92159 80 + 131892 gagacagcgtctcgctctgtcac-cca-ggctggagtacagtggcacgatctccgctcaccgcaacctctgcctcccaggtt s gorGor5.CYUI01000356v1 71009 80 + 152767 gagacagcgtctcgctctgtcac-cca-ggctggagtacagtggcacgatcttggctcaccgcaacctctgcctcccaggtt i gorGor5.CYUI01000356v1 C 0 C 0 s rheMac8.chr6 3592025 82 - 180051392 gagatggggtctcactctgtcacaccacggctggagtgcagtggcacaatctcgactcactgcaacctccacctcccaggtt i rheMac8.chr6 I 3 C 0 s macFas5.chr6 3779031 80 - 181584905 gagatggggtctcactctgtcac-cca-ggctggagtgcagtggcacaatctcgactcactgcaacctccacctcccaggtt i macFas5.chr6 I 1 C 0 s chlSab2.chr23 79659043 80 + 82825804 gagatggagtctcgctctgccgc-cca-ggctggagtgtagtggcacgatctcgactcactgcaacctccacctcccaggtt i chlSab2.chr23 I 5 C 0 s colAng1.NW_012117422v1 106732 80 - 815015 gacatggagtctcacgctgtcgc-cca-ggctggagtacagtggcacgatctcgactcactgcaacctccacctcccaggtt i colAng1.NW_012117422v1 I 1 C 0 e nomLeu3.chr2 160308970 106 - 163208435 I e cerAty1.NW_012001120v1 3524652 0 - 3647740 C e macNem1.NW_012020287v1 3800284 14 + 4899514 I e manLeu1.NW_012103876v1 1619072 0 - 1768974 C e panPan2.chr5 1783677 0 - 183735486 C e panTro5.chr5 1831490 0 - 181907262 C a score=293785.000000 s hg38.chr5_KI270795v1_alt 92239 173 + 131892 caagcgattctcatgcctcagcctcctgagtagctgggattacaggtgcctctcatcacgcccagctaatgtttgtatttgttgtagagac-agggtatcaccagactcctgggacctccgcctcccgggatggtctccatctcctgacctcgtgatccgcctgcctctgtctc s gorGor5.CYUI01000356v1 71089 167 + 152767 caagcgattctcatgcctcagcctcctgagtagctgggattacagatgcctctcatcacgcccagctaatgtttgt------tgtagagac-agggtatcaccagtctcctgggacctccgcctcccgggatggtctccatctcctgacctcgtgatccgcctgcctctgtctc i gorGor5.CYUI01000356v1 C 0 C 0 s rheMac8.chr6 3592107 174 - 180051392 caagcgattctcctgcctcagcctcccgagtagctgggactacaggtgcccgccaccatgcctggctaatttttgtatttttagtagagacgggggtgtaaccagtctcctgggacctccgcctcccaggatggtctccatctgttgacttcatgatccatctgcctctgcctc i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3779111 174 - 181584905 caagcgattctcctgcctcagcctcccgagtagctgggactacaggtgcccgccaccatgcctggctaatttttgtatttttagtagagacgggggtgtaaccagtctcctgggacctccgcctcccaggatggtctccatctgttgacttcatgatccatctgcctctgcctc i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3800298 174 + 4899514 caagcgattctcctgcctcagcctcccgagtagctgggactacaggtgcccgccaccatgcctggctaatttttgtatttttagtagagacgggggtgtaaccagtctcctgggacctccgcctcccaggatggtctccatctgttgacttcatgatccatctgcctctgcctc i macNem1.NW_012020287v1 I 14 C 0 s chlSab2.chr23 79659123 173 + 82825804 caagcgattctcctgcctcagcctcccgagtagctgggactacaggtgcccgccaccatgcccgggtaatttttgtatttttaatagagac-ggggtgtaaccagtctcctgggacctccgcctcccaggatggtctccatctgttgacttcatgatccatctgcctctgcctc i chlSab2.chr23 C 0 C 0 s colAng1.NW_012117422v1 106812 173 - 815015 caagcgattctcctgcctcagcctcccgagtagctgggactacaggtgcctgccaccacgcccagctaatttttgtatttttagtagagac-agggtgtaaccagtctcctgggacctccgcctcccaggatggtctccatctcttgacctcatgatctgtctgcctccgcctc i colAng1.NW_012117422v1 C 0 C 0 e nomLeu3.chr2 160308970 106 - 163208435 I e cerAty1.NW_012001120v1 3524652 0 - 3647740 C e manLeu1.NW_012103876v1 1619072 0 - 1768974 C e panPan2.chr5 1783677 0 - 183735486 C e panTro5.chr5 1831490 0 - 181907262 C a score=100474.000000 s hg38.chr5_KI270795v1_alt 92412 42 + 131892 ccaaagtgctgggattacaggcctgagccactgcgcccggcc s gorGor5.CYUI01000356v1 71256 42 + 152767 ccaaagtgctgggattacaggcctgagccaccgcgcccggcc i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160309076 42 - 163208435 ccaaagtgctgggattacaggcctgagccacggcgcccggcc i nomLeu3.chr2 I 106 C 0 s rheMac8.chr6 3592281 42 - 180051392 ccaaagtgctgggattacagacctgagccaatgcacctggcc i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3779285 42 - 181584905 ccaaagtgctgggattacaggcctgagccaatgcacctggcc i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3800472 42 + 4899514 ccaaagtgctgggattacaggcctgagccaatgcacctggcc i macNem1.NW_012020287v1 C 0 C 0 s chlSab2.chr23 79659296 42 + 82825804 cgaaagtgctgggattacaggcctgggccaacgcgcctggcc i chlSab2.chr23 C 0 C 0 s colAng1.NW_012117422v1 106985 42 - 815015 ccaaagtgctgggattacaggcctgagccaacgcgcctggcc i colAng1.NW_012117422v1 C 0 C 0 e cerAty1.NW_012001120v1 3524652 0 - 3647740 C e manLeu1.NW_012103876v1 1619072 0 - 1768974 C e panPan2.chr5 1783677 0 - 183735486 C e panTro5.chr5 1831490 0 - 181907262 C a score=52098.000000 s hg38.chr5_KI270795v1_alt 92454 13 + 131892 AGGTGCGTCCTTC s gorGor5.CYUI01000356v1 71298 13 + 152767 AGGTGCATCCTTC i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160309118 13 - 163208435 AGGTGCGTCCTTC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3592323 13 - 180051392 AGGTGCATCCTTC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3779327 13 - 181584905 AGGTGCATCCTTC i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3800514 13 + 4899514 AGGTGCATCCTTC i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012001120v1 3524652 13 - 3647740 AGGTGCGTCCTTC i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79659338 13 + 82825804 AGGTGCATCCTTC i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1619072 13 - 1768974 AGGTGCGTCCTTC i manLeu1.NW_012103876v1 C 0 C 0 s colAng1.NW_012117422v1 107027 13 - 815015 AGGTGCATCCCTC i colAng1.NW_012117422v1 C 0 C 0 e panPan2.chr5 1783677 0 - 183735486 C e panTro5.chr5 1831490 0 - 181907262 C a score=4667207.000000 s hg38.chr5_KI270795v1_alt 92467 818 + 131892 TTTCTCCCTTTCCAGGGAGAATGCTCTGCTCTTCTTCCTGCTGGATCCCTCCTCTACCTGCTTCTCTCCCACCTCCTGCAGC----CCCCGGAGCCCCGTGGCGATGCAGGCAGACTCATCTGTACCCTCATTCTGTTTGCAGAGCCACATCTCTGGGCTGGCTCTGCCCAAGGACACCACACCTTCTCCATTCCTCTTGCCCTTTCCCCGTGGGGTGCAGGTGGGGCTG-----------------GGCCCACGATGGCATCAGGCCCACTCTCTCTAATGCAGGAAGGGAT-CAGATGCCGGGAGCCATGGAGATTGTCCTCATCCCGATCATCTCCCATCTTAGCAAATGATGATGAAGACAGTTTTCCCACAAGATAGGCATAGCCTCTGGGACAGTGCCTCGTTTATTTTCTAGCACAAAATAGACGTTAGAACAGTGGGGCTTTGTGGGcatatggagatttttaaggctccttaggaggcaggtaaaaatttcttcaataagacaaaacactatcccc-aaagaaaatgattgatacattggatgatagtaaaattaagaattttttcatcaata--agagtaaaaagatggggccgggtgtggtggctcacgctgt-atcccagcactttgggaggccaaggcgggaggatcacttgaggtcaggagttagagaacagcctgagcagcttagcaagacctcgtctctacaaaaaatgaaaaattggctgggcatggtggtgcatgcctgtggtcccagatacttgggaggctgaggcaggaggaacacttgagcctgggaggctgaggctgcagtgagccatgattgtgccactgc s panTro5.chr5 1831490 816 - 181907262 TTTCTCCCTTTTGAGGGAGAATGCTCTGCTCTTCTTCCTGCTGGATCCCTCCTCTACCTGCTTCTCTCCCACCTCCTGCAGC----CCCCGGAGCCCCGTGGCGATGCAGGCAGACT-ATCTGTACCCTCATTCTGTTTGCAGAACCACATCTCTGGGCTGGCTCTGCCCAAGGAGACCACACCTTCTCCATTCCTCATGCCCTGTCCCCATGGGGTGCAGGTGGGGCTG-----------------GGCCCACGATGGCATCAGGCCCACTCTCTCTAATGCAGGAAGGGTT-CAGATGCCGGGAGCCGTGGAGATAGTCCTCATCCCGATCATCTCCCAGCTTAGCAAATGATGATGAAGACAGTTTTCCCACAAGATAGGCATAGCCTCTGGGACAGTGCCTCGTTTA-TTTCTAGCACAAAATAGACATTAGAACAGTGGGGCTTTGTGGGCATATGGAGATTTTTAAGGCTCCTTAGGAGGCAGGTAAAAATTTCTTCAATAAGACAAAACACTATCCCC-AAAGAAAATGATTGATACATTGGATGATAGTAAAATTAAGAATTTTTTCACCAATA--AGAGTAAAAAGATGGggccgggtgtggtggctcacgctgt-atcccagcactttgggaggccaaggcgggaggatcacttgaggtcaggagttagagaacagcctaagcagcttagcaagacctcgtctctacaaaaaatgaaaaattggctgggcgtggtggtgcacgcctgtggtcccagatacttgggaggctgaggcaggaggaacacttgagcctgggaggctgaggctgcagtgagccatgattgtgccactgc i panTro5.chr5 C 0 C 0 s panPan2.chr5 1783677 816 - 183735486 TTTCTCCCTTTTGAGGGAGAATGCTCTGCTCTTCTTCCTGCTGGATCCCTCCTCTACCTGCTTCTCTCCCACCTCCTGCAGC----CCCCGGAGCCCCGTGGCGATGCAGGCAGACT-ATCTGTACCCTCATTCTGTTTGCAGAACCACATCTCTGGGCTGGCTCTGCCCAAGGAGACCACACCTTCTCCATTCCTCATGCCCTGTCCCCATGGGGTGCAGGTGGGGCTG-----------------GGCCCACGATGGCATCAGGCCCACTCTCTCTAATGCAGGAAGGGTT-CAGATGCCGGGAGCCGTGGAGATAGTCCTCATCCCGATCATCTCCCAGCTTAGCAAATGATGATGAAGACAGTTTTCCCACAAGATAGGCATAGCCTCTGGGACAGTGCCTCGTTTA-TTTCTAGCACAAAATAGACATTAGAACAGTGGGGCTTTGTGGGCATATGGAGATTTTTAAGGCTCCTTAGGAGGCAGGTAAAAATTTCTTCAATAAGACAAAACACTATCCCC-AAAGAAAATGATTGATACATTGGATGATAGTAAAATTAAGAATTTTTTCACCAATA--AGAGTAAAAAGATGGggccgggtgtggtggctcacgctgt-atcccagcactttgggaggccaaggcgggaggatcacttgaggtcaggagttagagaacagcctaagcagcttagcaagacctcgtctctacaaaaaatgaaaaattggctgggcgtggtggtgcacgcctgtggtcccagatacttgggaggctgaggcaggaggaacacttgagcccgggaggctgaggctgcagtgagccatgattgtgccactgc i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 71311 820 + 152767 TTTCTCCCTTTCCAGGGAGAATGCTCTGCTCTTCTTCCTGCTGGATCCCTCCTCTACCTGCTTCTCTCCCATCCCCTGCAGC----CCCCGGAGCCCCGTGGCGATGCAGGCAGACTCATCTGTACCCTCATTCTGTTTGCAGAACCGCATCTCTGGACTGGCTCTGCCCAAGGAGACCACACCTTCTCCATTCCTCATGCCCTGTCCCCGTGGGGTGCAGGTGGGGCTG-----------------GGCCCATGATGGCATCAGGCCCACTCTCTCTAATGCAGGAAGGGTT-CAGATGCCGGGAGCCGTGGAGATTGTCCTCATTCTGATCATCTCCCGGCCTAGCAAATGATGATGAAGACAGTTTTCCCACAGGATAGGCATAGCCTCTGGGACAGTGCCTCGTTTATTTTCTAGCACAAAATAGACGTTAGAACAGTGGGGCTTTGTGGGCATATGGAGATTTGTAAAGCTccttaggaggcaggtaaaaatttcttcaataagacaaaacactatcccc-aaagaaaatgattgatacattggatgatagtaaaattaagaattttttcatcaataagagagtaaaaagatggggccgggtgtggtggctcacgctgt-atcccagcactttgggaggccaaggcgggaggatcacttgaggtcaggagttagagaacggcctgagcagcttagcaagacctcgtctctacaaaaaatgaaaaattggctgggcgtggtggtgcatgcctgtggtcccagatactcaggaggctgaggcaggaggaacacttgagcctgggaggctgaggctgcagtgagccatgattgtgccactgc i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160309131 822 - 163208435 TTTCTCCCTTTCCAGGAAGAATGCTCTGCTCTTCTGCCCGCTGGATCCCTCCTCTACCTGCTTCTCTCCCACCTCCTACAGC----CCCCGGAGCCCCATGGCGATGCAGGCAGACTCATCTGTACCCTCATTCCGTTTGCAGAACCACATCTCTGGGCTGGCTGTGCCCAAGGACACCACACCTTCTCCATTCCTCATGCCCTGTCCCTGTGGGGTGCAGGTGGGGCTG-----------------GGCCCACGATGGCATCAGGCCCACTCTCTCTAACGCAGGAAGGGCTCCAGATGCCGGGAGCCATGGAAATTGTCCTCATCCCGATCGTCTCCTGGCTTAGCAAATGCTGATGAAGACAG-TTTCCCACAAGATAGGCGTAGCCTCTGGGACAGTGCCTCGTTTATTTTCTAGCACGAAATAGACATTAGAACAGTGGGGCTTTGTGGGCATATGGAGATTTGTAAGGCTccttaggaggcaggtaaaagtttcttcaataagacaaaacactatccccaaaagaaaatgattgatacattggatgattgtaaaattaagaattttttcatcaataagagagtaaaaagATGGggccgggtgtggtggctcttgctgtaatcccagcactttgggaggccaaggtgcaaggatcacttgaggtcaggagttagagaacagcctgagcaacttagcaagacattgtctctactaaaaatgaaaaattggctgggcatggtggtgcacacctgtggccccagatacttgggaggctgaagcaggaggaacacttgagcctgggaggctgaggctgccgtgagccatgattgtgccactgc i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3592336 839 - 180051392 TTTCTCCCTTCCCAGGGAGAATGCTCTGCTCTTCTTCCTGCTGGATCCCTCCTCTACCTGCTTCTCTCCCACCTCTTGCAGC----CCCTGGAGCCCCATGGCAATGCAGGCAGACTCATCTGTACCCTCATTCTGTTTGCAGAACCACGTGTCTGGCCTGGCTTTGCCCAAGGACACCACACCTTCTCCATTCCTCATGCCCTGTCCCTGTGGGGTGCAGGTGGGGCTGGGATGGGGCACCCGCCTGGCCCACAGTGGCACCAGGCCCACTCTCTCTAATTCAGGAAGCGTTTCAGATGCTGGGAGCCATGGAAATTGTCCTCATCCTGATCATATCCTGGCTTGGCAAATGATGATGAAGACAGTTTTCCCACAAGATAGACGTAGCCTCTGGGACAGTGCCTCATTTATTTTCTAGCACAAAATAGGCATTAGAACAGTGGGACTTTGTGGGcatatggagatttttaaggctccttaggaggcatgtaaaaatgtcctcaataagacaaaacactatcccc-aaagaaaatgattgatacgttgggcgatagtaaaattaagaattttttcatcaataagagagtaaagagatggggccgggtgtggtggctcatgctgtaatcccagcactttgggaggccaaggtgggaggatcacttgaggtcaggagttagagaacagcctgagcaacttagcaagatcttgtctctatcaaaaatgaaaaattagctgggcgtggtggtgcatgcctgtggttccagatacttgggaggctgaggcaggaggatcacttgagcctgggaggttgaggctgcagtgagccatgattgtaccactgc i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3779340 839 - 181584905 TTTCTCCCTTCCCAGGGAGAATGCTCTGCTCTTCTTCCTGCTGGATCCCTCCTCTACCTGCTTCTCTCCCACCTCTTGCAGC----CCCTGGAGCCCCATGGCAATGCAGGCAGACTCATCTGTACCCTCATTCTGTTTGCAGAACCACGTGTCTGGCCTGGCTCTGCCCAAGGACACCACACCTTCTCCATTCCTCATGCCCTGTCCCTGTGGGGTGCAGGTGGGGCTGGGATGGGGCACCCGCCTGGCCCACAGTGGCATCAGGCCCACTCTCTCTAATTCAGGAAGTGTTTCAGATGCTGGGAGCCATGGAAATTGTCCTCATCCTGATCATATCCTGGCTTGGCAAATGATGATGAAGACAGTTTTCCCACAAGATAGACGTAGCCTCTGGGACAGTGCCTCATTTATTTTCTAGCACAAAATAGGCATTAGAACAGTGGGACTTTGTGGGcatatggagatttttaaggctccttaggaggcatgtaaaaatgtcctcaataagacaaaacactatcccc-aaagaaaatgattgatacgttgggcgatagtaaaattaagaattttttcatcaataagagagtaaagagatggggccgggtgtggtggctcatgctgtaatcccagcactttgggaggccaaggtgggaggatcacttgaggtcaggagttagagaacagcctgagcaacttagcaagatcttgtctctatcaaaaatgaaaaattagctgggcgtggtggtgcatgcctgtggttccagatacttgggaggctgaggcaggaggatcacttgagcctgggaggttgaggctgcagtgagccatgattgtaccactgc i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3800527 839 + 4899514 TTTCTCCCTTCCCAGGGAGGATGCTCTGCTCTTCTTCCTGCTGGATCCCTCCTCTACCTGCTTCTCTCCCACCTCTTGCAGC----CCCTGGAGCCCCATGGCAATGCAGGCAGACTCATCTGTACCCTCATTCTGTTTGCAGAACCACGTGTCTGGCCTGGCTCTGCCCAAGGACACCACACCTTCTCCATTCCTCATGCCCTGTCCCTGTGGGGTGCAGGTGGGGCTGGGATGGGGCACCCGCCTGGCCCACAGTGGCATCAGGCCCACTCTCTCTAATTCAGGAAGCGTTTCAGATGCTGGGAGCCATGGAAATTGTCCTCATCCTGATCATATCCTGGCTTGGCAAATGATGATGAAGACAGTTTTCCCACAAGATAGACGTAGCCTCTGGGACAGTGCCTCATTTATTTTCTAGCACAAAATAGGCATTAGAACAGTGGGACTTTGTGGGcatatggagatttttaaggctccttaggaggcatgtaaaaatgtcctcaataagacaaaacactatcccc-aaagaaaatgattgatacgttgggcgatagtaaaattaagaattttttcatcaataagagagtaaagagATGGggccgggtgtggtggctcatgctgtaatcccagcactttgggaggccaaggtgggaggatcacttgaggtcaggagttagagaacagcctgagcaacttagcaagatcttgtctctatcaaaaatgaaaaattagctgggcgtggtggtgcatgcctgtggttccagatacttgggaggctgaggcaggaggatcacttgagcctgggaggttgaggctgcagtgagccatgattgtaccactgc i macNem1.NW_012020287v1 C 0 I 667 s cerAty1.NW_012001120v1 3524665 840 - 3647740 CTTCTCCCTTCCCAGGGAGAATGCTCTGCTCTTCTTCCTGCTGGATCCCTCCTCTACCTGCTTCTCTCCCACCTCCTGCAGCGCCTGCCTGGAGCCCCATGGCGATGCAGGCAGACTCATCTGTACCCTCATTCTGTTTAAAGAACCACATATCTGGCCTGGCTCTGCCCAAGGACACCACACCTTCTCCATTCCTCCTGCCCTGTCCCTGTGGGGTGCAGGTGGGGCTGGGATGGGGCACCCGCCTGGCCCACGGTGGCATCAGGCCCACTCTCTCTAATGCAGGAAGCGTTTCAGATGCCGGGAGCCATGGAAATTGTCCTCATCCCAATCAT---CTGGCTTGGCAAATGATGATGAAGACAGTTTTCCCACAAGATAGACGTAGCCTCTGGGACAGTGCCTCGTTTATTTTCTAGCACAAAATAGGCATTAGAACAGTGGGACTTTGTGGGCGTATGGAGATTTTTAAGGCTccttaggaggcatgtaaaaatgtcctcaataagacaaaacactatcccc-aaagaaaatgattgatacgttgggcgatagtaaaattaagaattttttcatcaataagagagtaaagagatggggccgggtgtggtggctcatgctgtaatcccagcactttgggaggccaaggtgggaggatcacttgaggtcaggagttagagaacagcctgagaaacttagcaagatcttgtctctatcaaaaatgaaaaattagctgggcgtggtggtgcatgcctgtggttccagatacttgggaggctgaggcaggaggatcacttgagcctgggaggttgaggctgcagtgagccatgattgtaccactgc i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79659351 837 + 82825804 TTTCTCCCTTCCCGTGGAGAATGCTCTGCTCTTCTTCCTGCTGGATCCCTCCTCTACCTGCTTCTCTCCCACCTCTTGCAGC----CCCTGGAGCCCCATGGCAATGCAGGCAGACTCATCTGTACCCTCATTCTGTTTGCAGAACCACGTGTCTGGCCTGGCTCTGCCCAAGGACACCACACCTTCTCCATTCCTCATGCCCTGTCCCTGTGGGGTGCAGGTGGGGCTGGGATGGGGCACCCGCCTGGCCCACAGTGGCATCAGGTCCACTCCCTCTAATGCAGGAAGCGTTTCAGATGCCGGGAGCCATGGAAATTGTCCTCATCCTGATCATATCCTGGCTTGGCAAATGATGATAAAGACAGTTTTCCCACAAGATAGACGTAGCCTCTGGGACAGTGCCTCGTTTATTTTCTAGCACAAAATAGGCATTAGAACAGTGGGACTTTGTGGGCATATGGAGatttttaaggctccttaggaggcatgtaaaaatgtcctcaataagacaaaacactatcccc-aaagaaaatgattgatacgttgggcgatagtaaaattaagaattttttcatcaataagagagtaaagagat--ggccgggtgtggtggctcatgctgtaatcccagcactttgggaggccaaggtgggaggatcacttgaggtcaggagttagagaacagcctgagcaacttagcaagatcttgtctctatcaaaaatgaaaaattagctgggcgtggtggtgcatgcctgtggttccagatacctgggaggctgaggcaggaggatcacttgagcctgggaggttgaggctgcagtgagccatgattataccactgc i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1619085 837 - 1768974 CTTCTCCCTTCCCAGGGAGAATGCTCTGCTCTTCTTCCTGCTGGATCCCTCCTCTACCTGCTTCTCTCCCACCTCTTGCAGC----CCCTGGAGCCCCATGGCGATGCAGGCAGGCTCATCTGTACCCTCATTCTGTTTGCAGAACCACGTGTCTGGCCTGGCTCTGCCCAAGGACACCACAGCTTCTCCATTCCTCATGCTCTGTCCCTGTGGGGTGCAGGTGGGGCTGGGATGGGGCACCCACCTGGCCCACGGTGGCATCAGGCCCACTCTCTCTAATGCAGGAAGCGTTTCAGATGCCGGGAGCCATGGAAATTGTCCTCATCCTGATCATATCCTGGCTTGGCAAATGATGATGAAGACAGTTTTCCCACAAGATAGACGTAGCCTCTGGGACAGTGCCTCATTTATTTTCTAGCACAAAATAGGCATTAGAACAGTGGGACTTTGTGGGCGTATGGAGATTTTTAAGGCTccttaggaggcatgtaaaaatgtcctcaataagacaaaacactatcccc-aaagaaaatgattgatacgttgggtgatagtaaaattaagaa-tttttcatcaataagagagtaaagagAT-Ggggcgggtgtggtggctcatgctgtaatcccagcactttgggaggccaaagtgggaggatcacttgaggtcaggagttagagaacagcctgagcaacttagcaagatcttgtctctatcaaaaatgaaaaattagctgggcgtggtggtgcatgcctgtggttccagatacttgggaggctgaggcaggagaatcactcgagcctgggaggttgaggctgcagtgagccatgattgtaccactgc i manLeu1.NW_012103876v1 C 0 C 0 s colAng1.NW_012117422v1 107040 833 - 815015 TTTCTCCCTTCCCAGGGAGAATGCTCTGCTCTTCTTTCTGCTGGATCCCTCTTCTGCCTGCTTCTCTCCCACCTCTTGCAGC----CCCTGGAGCCCCATGGCGATGCTGGCAGACTCATCTGTACCCTCATTCTGTTTGCAGAACCATATATCTGGCCTGGCTCTGCCCAAGGACACCACACCTTCTCCGTTCTTCATGCCCTGTCCCTGTGGGGTGCAGGTGAGGCT------GGGCACCTGCCTGGCCCACAATGGCATCAGGCCCACTCTCTCTAATGCAGGAAGGGTTTCAGATGCCAGGAGCCATGGAAATTGTCCTCATCCTGATCATCTCCTGGCTTGGCAAATGATGATGAAGACAGTTTTCTCTCAAGATAGACGTAGCCTCTGGGACAGTGCCTTGTTTATTTTCTAGCACAAAATAGGCATTAGAACAGTGGGACTTTGTGGGcatatggagatttttaaggctccttaggaggcaggtaaaaatttcctcaataagacaaaacactatcccc-aaagaaaatgattgatacgttgggcgatagtaaaattaagaattttttcatcaataagacagtaaagagaTGAggctgggtgtggtggctcatgctgtaatcccagcactttgggaggccaaggtgggaggatcacttgaggtcaggagttagagaacagcctgagcaacttagcaagatcttgtctctatcaaaaatgaaaaattagctgggcgtggtggtgcatgcctgtggttccagatacttgggaggctgaggcaggaggatcagttgagcctgggaggttgaggctgcagtgagccatgattgtaccactgc i colAng1.NW_012117422v1 C 0 C 0 a score=169270.000000 s hg38.chr5_KI270795v1_alt 93285 37 + 131892 actgcagcctgggtgacagggtgagactctgtctctt s panTro5.chr5 1832306 37 - 181907262 actgcagcctgggtgacagggtgagactctgtctctt i panTro5.chr5 C 0 C 0 s panPan2.chr5 1784493 37 - 183735486 actgcagcctgggtgacagggtgagactctgtctctt i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 72131 35 + 152767 actgcagcctgggtgacagggcgaga--ctgtctctt i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160309953 36 - 163208435 actgcagcct-ggtgacagggtgagactctgtctctt i nomLeu3.chr2 C 0 I 3 s rheMac8.chr6 3593175 37 - 180051392 actccagcctgggtgacagggtgagactctgtctctt i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3780179 37 - 181584905 actccagcctgggtgacagggtgagactctgtctctt i macFas5.chr6 C 0 I 302 s cerAty1.NW_012001120v1 3525505 37 - 3647740 actccagcctgggtgacagggtgagactctgtctctt i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79660188 37 + 82825804 actccagcctgggtgacagggtgagactctgtctcta i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1619922 37 - 1768974 actccagcctgggtgacagggtgagactctgtctctt i manLeu1.NW_012103876v1 C 0 C 0 s colAng1.NW_012117422v1 107873 37 - 815015 actccagcctgcgtgacagggtgagactctgtatctt i colAng1.NW_012117422v1 C 0 C 0 e macNem1.NW_012020287v1 3801366 667 + 4899514 I a score=15015.000000 s hg38.chr5_KI270795v1_alt 93322 3 + 131892 aaa s panTro5.chr5 1832343 3 - 181907262 aaa i panTro5.chr5 C 0 C 0 s panPan2.chr5 1784530 3 - 183735486 aaa i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 72166 3 + 152767 aaa i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160309992 3 - 163208435 aaa i nomLeu3.chr2 I 3 C 0 s rheMac8.chr6 3593212 3 - 180051392 aaa i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3780518 3 - 181584905 aaa i macFas5.chr6 I 302 C 0 s cerAty1.NW_012001120v1 3525542 3 - 3647740 aaa i cerAty1.NW_012001120v1 C 0 I 306 s chlSab2.chr23 79660225 3 + 82825804 aaa i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1619959 3 - 1768974 aaa i manLeu1.NW_012103876v1 C 0 C 0 s colAng1.NW_012117422v1 107910 3 - 815015 aaa i colAng1.NW_012117422v1 C 0 C 0 e macNem1.NW_012020287v1 3801366 667 + 4899514 I a score=25025.000000 s hg38.chr5_KI270795v1_alt 93325 5 + 131892 aaaaa s panTro5.chr5 1832346 5 - 181907262 aaaaa i panTro5.chr5 C 0 C 0 s panPan2.chr5 1784533 5 - 183735486 aaaaa i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 72169 5 + 152767 aaaaa i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160309995 5 - 163208435 aaaaa i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3593215 5 - 180051392 aaaaa i rheMac8.chr6 C 0 I 333 s macFas5.chr6 3780521 5 - 181584905 aaaaa i macFas5.chr6 C 0 I 1 s cerAty1.NW_012001120v1 3525851 5 - 3647740 aaaaa i cerAty1.NW_012001120v1 I 306 C 0 s chlSab2.chr23 79660228 5 + 82825804 aaaaa i chlSab2.chr23 C 0 I 311 s manLeu1.NW_012103876v1 1619962 5 - 1768974 aaaaa i manLeu1.NW_012103876v1 C 0 I 316 s colAng1.NW_012117422v1 107913 5 - 815015 aaaaa i colAng1.NW_012117422v1 C 0 I 351 e macNem1.NW_012020287v1 3801366 667 + 4899514 I a score=10514.000000 s hg38.chr5_KI270795v1_alt 93330 11 + 131892 gaggtggggaa s panTro5.chr5 1832351 11 - 181907262 GAGGTGGGGAA i panTro5.chr5 C 0 C 0 s panPan2.chr5 1784538 11 - 183735486 GAGGTGGGGAA i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 72174 11 + 152767 gaggtggggga i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160310000 11 - 163208435 GAGGTGAGGAA i nomLeu3.chr2 C 0 C 0 s macFas5.chr6 3780527 10 - 181584905 gaagcaggac- i macFas5.chr6 I 1 C 0 s cerAty1.NW_012001120v1 3525856 10 - 3647740 gaggcaggac- i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79660544 10 + 82825804 gaggcaggac- i chlSab2.chr23 I 311 C 0 e macNem1.NW_012020287v1 3801366 667 + 4899514 I e rheMac8.chr6 3593220 333 - 180051392 I e colAng1.NW_012117422v1 107918 351 - 815015 I e manLeu1.NW_012103876v1 1619967 316 - 1768974 I a score=46571.000000 s hg38.chr5_KI270795v1_alt 93341 18 + 131892 tggaggagggtgaaaaga s panTro5.chr5 1832362 18 - 181907262 TGGAGGAGGGCGAAAAGA i panTro5.chr5 C 0 C 0 s panPan2.chr5 1784549 18 - 183735486 TGGAGGAGGGCGAAAAGA i panPan2.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 72185 18 + 152767 tggaggagggtgaaaaga i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160310011 18 - 163208435 TGGAGGAGGGTGAAAAGA i nomLeu3.chr2 C 0 C 0 s macFas5.chr6 3780537 17 - 181584905 tggagaaatgtgaaaag- i macFas5.chr6 C 0 C 0 s cerAty1.NW_012001120v1 3525866 17 - 3647740 tggagaaaggtgaaaag- i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79660554 18 + 82825804 tggagaagggtgaaaaga i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1620283 18 - 1768974 TGGAGAAGGGTGAAAAGA i manLeu1.NW_012103876v1 I 316 C 0 e macNem1.NW_012020287v1 3801366 667 + 4899514 I e rheMac8.chr6 3593220 333 - 180051392 I e colAng1.NW_012117422v1 107918 351 - 815015 I a score=641679.000000 s hg38.chr5_KI270795v1_alt 93359 170 + 131892 taaattacatgtagagtataaagagaattcctgtaagttaat---aaaaatgcatgcgggggcttaatacctaggtgatgggttgataagtgcagcaaaccaccatggcacatgtttacctatgtaacaaacctgcacgttctgtacatgtatcccagaacttaaagtaaaat s panTro5.chr5 1832380 172 - 181907262 TAAATCACATGTAGAGTATAAAGAGAATTCCTGTAAGTTAATAAGAAAaatgcatgc-gggacttaatacctaggtgacgggtggataagggcagcaaaccaccatggcacatgtttacctgtgtaacaaacctgcacgttctgtacatgtatcccagtacttaaagtaaaat i panTro5.chr5 C 0 N 0 s panPan2.chr5 1784567 172 - 183735486 TAAATCACATGTAGAGTATAAAGAGAATTCCTGTAAGTTAATAAGAAAaatgcatgc-gggacttaatacctaggtgacgggtggataagggcagcaaaccaccatggcacatgtttacctgtgtaacaaacctgcacgttctgtacatgtatcccagtacttaaagtaaaat i panPan2.chr5 C 0 N 0 s gorGor5.CYUI01000356v1 72203 164 + 152767 taaatcacatgtagagtataaagagaattcctgtaagttaat---aaaaatgcatgc-ggggcttaatacctaggtgatgggttgataagtgcagcaaaccaccatggcacatgtttacctgtgtaacaaacctgcacgttctgtacatgtatcccagaacttaaaat----- i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160310029 172 - 163208435 TAAATCACATGTAGAGTATAAAGAGAATTCCTGTAAGTTAATAAGAAAaatgcgtgc-ggggcttaatacctaggtgacgggtggataagtgcagcaaaccaccatggcacatgtttacctgtgtaacaaacctgcatgttctgtacatgtatcccagtacttaaagtaaaat i nomLeu3.chr2 C 0 I 4 s rheMac8.chr6 3593553 172 - 180051392 taaatcacgggtagagtataaagagaattcctacacattaataagaaaaaTGTATGT-GGGGCTTAATACCTAgctgacgggttgataagtgcagcaaaccaccatggcacatgtttacctgtgcaacaaacctgcacgttctgtacatgtgtcctagaaattaaagtaaaat i rheMac8.chr6 I 333 C 0 s macFas5.chr6 3780554 172 - 181584905 taaatcacgggtagagtataaagagaattcctacacattaataagaaaaaTGCATGT-GGGGCTTAACACCtaggtgacgggttgataagtgcagcaaaccaccatggcacatgtttacctgtgcaacaaacctgcacgttctgtacatgtgtcccagaacttaaagtaaaat i macFas5.chr6 C 0 C 0 s cerAty1.NW_012001120v1 3525883 172 - 3647740 taaatcacgggtagagtataaagagaattcctacacattaataagaaaaaTGCATGT-GGGGCTTAACACCtaggtgatgggttgataagtgcagcaaaccaccatggcacatgtttacctgtgcaacaaacctgcacgttctgtacatgtgtcccagaacttaaagtaaaat i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79660572 172 + 82825804 taaatcacaggtagagtataaagagaattcctacacattaataagaaaaatgcatgt-ggggcttaacacctaggtgacgggttgataagtgcagcaaaccaccatggcacatgtttacctgtgcaacaaacctgcacgttctgtacatgtgtcccagaacttaaagtaaaat i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1620301 172 - 1768974 TAAATCACGGGTAGAGTATAAAGAGAATTCCTACACATTAATAAGAAAAATGCATGT-GGGGCTTAACACCtaggtgacgggttgataagtgcagcaaaccaccatggcacatgtttacctgtgcaacaaacctgcacgttctgtacatgtgtcccagaacttaaagtaaaat i manLeu1.NW_012103876v1 C 0 C 0 e macNem1.NW_012020287v1 3801366 667 + 4899514 I e colAng1.NW_012117422v1 107918 351 - 815015 I a score=64663.000000 s hg38.chr5_KI270795v1_alt 93529 41 + 131892 tttttttttt-ttttgagatggagtctcgctctgtcgcccag s gorGor5.CYUI01000356v1 72367 38 + 152767 ---ttttttt-ttttgagacggagtctcgctctgtcgcccag i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160310205 41 - 163208435 tttttttttt-ttttgagacggagtctcgctctgtcacccag i nomLeu3.chr2 I 4 M 2456 s rheMac8.chr6 3593725 36 - 180051392 ---aattttt-ttttgagtc--agtcttgttctgtcatccag i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3780726 36 - 181584905 ---aattttt-ttttgagtc--agtcttgctctgtcatccag i macFas5.chr6 C 0 C 0 s cerAty1.NW_012001120v1 3526055 36 - 3647740 ---aattttt-tgttgagtc--agtcttgctctgtcatccag i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79660744 37 + 82825804 ---aattttttttttgagtc--agtcttgctctgtcatccag i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1620473 37 - 1768974 ---aatttttgttttgagtc--agtcttgctctgtcatccag i manLeu1.NW_012103876v1 C 0 C 0 e macNem1.NW_012020287v1 3801366 667 + 4899514 I e colAng1.NW_012117422v1 107918 351 - 815015 I a score=118524.000000 s hg38.chr5_KI270795v1_alt 93570 69 + 131892 -gtggattgcagtggcgtgatctcagctcattggaagctctgcctcctgggttcacgccattctcctgcc s gorGor5.CYUI01000356v1 72405 69 + 152767 -gtggatagcagtggcgtgatctcagctcattggaagctctgcctcccgggttcacgccattctcctgcc i gorGor5.CYUI01000356v1 C 0 C 0 s rheMac8.chr6 3593761 70 - 180051392 gctggagtgcagtggtgtgatctcggctcactgcaagctccgcctcccgggtttatgccattctcctgcc i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3780762 70 - 181584905 gctggagtgcagtggtgtgatctcggctcactgcaagctccgcctcccgggtttatgccattctcctgcc i macFas5.chr6 C 0 C 0 s cerAty1.NW_012001120v1 3526091 70 - 3647740 gctggagtgcagtgatgtgatctcggctcactgcaagctccgcctcccgggtttatgccattctcctgcc i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79660781 70 + 82825804 gctggagtgcagtggtgtgatctcggctcactgcaagctctgcctcctgggttcccaccattctcctgcc i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1620510 70 - 1768974 gctggagtgcagtggtgtgatctcggctcactgcaagctctgcctcctgggttcccaccattctcctgcc i manLeu1.NW_012103876v1 C 0 C 0 e nomLeu3.chr2 160310246 2456 - 163208435 M e macNem1.NW_012020287v1 3801366 667 + 4899514 I e colAng1.NW_012117422v1 107918 351 - 815015 I a score=138120.000000 s hg38.chr5_KI270795v1_alt 93639 60 + 131892 tcagcctcccgagtagctgggactacaggcacatgccaccatgcccagctaa-tttttgta s gorGor5.CYUI01000356v1 72474 60 + 152767 tcagcctcccgagtagctgggactacaggcacatgccaccatgcccagctaa-tttttgta i gorGor5.CYUI01000356v1 C 0 C 0 s rheMac8.chr6 3593831 61 - 180051392 tcagcctcccatgtagctgggactacaggtgcccaccaccacacctggctaattttttgta i rheMac8.chr6 C 0 I 1 s macFas5.chr6 3780832 61 - 181584905 tcagcctcccatgtagctgggactacaggtgcccaccaccacacctggctaattttttgta i macFas5.chr6 C 0 I 1 s cerAty1.NW_012001120v1 3526161 61 - 3647740 tcagcctcccatgtagctgggactacaggtgcccaccaccacacctggctaattttttgta i cerAty1.NW_012001120v1 C 0 I 1 s chlSab2.chr23 79660851 61 + 82825804 tcagcctcccatgtagctgggactacaggtgcccgccaccacacctggctaattttttgta i chlSab2.chr23 C 0 I 1 s manLeu1.NW_012103876v1 1620580 61 - 1768974 tcagcctcccatgtagctgggactacaggtgcccgccaccacacctggctaattttttgta i manLeu1.NW_012103876v1 C 0 I 1 s colAng1.NW_012117422v1 108269 61 - 815015 tcagcctcccatgtagctgggactacaggtgcccgccaccacacctggctaattttttgta i colAng1.NW_012117422v1 I 351 I 1 e nomLeu3.chr2 160310246 2456 - 163208435 M e macNem1.NW_012020287v1 3801366 667 + 4899514 I a score=983288.000000 s hg38.chr5_KI270795v1_alt 93699 344 + 131892 tttttagtagagacggggtttcaccgtgttagccaggatggtctcgatctcctgacctcgtgatccacctgcctcggcctcccaaagtgctgggattacaggcatgagccaccgcgcctggcctaaagtaaaat-aaattttttaaaaaattaagaaaaaagctggcagaccaataggacaatgggtgaaagaaatgaagagggacacaaaagggaaAGAAGAAagggagggaggaggggggagggagggaggagggagggaaggagggagaggaaAGAGCAAATgaacatccaaatggccaaaaagcatttaaaacatgctcagcctcataagccatcaaattt s gorGor5.CYUI01000356v1 72534 329 + 152767 tttttagtagagacggggtttcgccgtgttagccaggatggtctcgatctcctgacctcatgatccacctgcctcggcctcccaaagtgctgggattacaggcgtgagccaccgcgcctggcctaaagtaaaat-aaatttttttaaaaattaagaaaaaagctggcagaccaataggacaatgggtgaaagaaatgaagagggacacaaaagggaaAGAAGAAagggagggaggagggggaaggga---------------aggagggagaggaAAGAGCAAATgaacatccaaatggccaaaaagcatttaaaacatgctcagcctcataagccatcaaattt i gorGor5.CYUI01000356v1 C 0 C 0 s rheMac8.chr6 3593893 330 - 180051392 tttttagtagagacggggtttcactgtgttggccaagatggtctcaatctcctgacctcgtgatccgcccacctcagcctcccaaagtgctgggattacaggtgtgagccactgggcctggcctaaagtaaaataaaaTGTTATAAAAAATTAAGAAAACAACTGGCAGACTGATAGGACAATGGGTGAAAGAAATGAAGAGGGACAAAAAAGGgaaggaagaaagggagggtggagggagaaggga---------------ggaagCAAGAGGAAAGAacaaatgaacatccaaatggccaaaaagcatataaaacatgctcaaccttgtaagccatcaaattt i rheMac8.chr6 I 1 C 0 s macFas5.chr6 3780894 330 - 181584905 tttttagtagagacggggtttcactgtgttagccaagatggtctcaatctcctgacctcgtgatccgcccacctcagcctcccaaagtgctgggattacaggtgtgagccactgggcccggactaaagtaaaataaaaTTTTATAAAAAATTAAGAAAACAACTGGCAGACTGATAGGACAATGGGTGAAAGAAATGAAGAGGGACAAAAAAGGgaaggaagaaagggagggtggagggagaaggga---------------ggaagCAAGAGGAAAGAacaaatgaacatccaaatggccaaaaagcatataaaacatgctcaaccttgtaagccatcaaattt i macFas5.chr6 I 1 C 0 s macNem1.NW_012020287v1 3802033 330 + 4899514 tttttagtagagacggggtttcactgtgttagccaagatggtctcaatctcctgacctcgtgatccgcccacctcagcctcccaaagtgctgggattacaggtgtgagccactgggcctggccTAAAGTAAAATAAAATTTTATAAAAAATTAAGAAAACAACTGGCAGACTGATAGGACAATGGGTGAAAGAAATGAAGAGGGACAAAAAagggaaggaagaaagggagggtggagggagaaggga---------------ggaagcaagaggAAAGAacaaatgaatatccaaatggccaaaaagcatataaaacatgctcaaccttgtaagccatcaaattt i macNem1.NW_012020287v1 I 667 C 0 s cerAty1.NW_012001120v1 3526223 330 - 3647740 tttttagtagagatggggtttcactgtgttagccaagatggtctcaatctcctgacctcgtgatccgcccacctcagcctcccaaagtgctgggattacaggtgtgagccactgggcccggcctaaagtaaaataaaaTTTTTTTAAAAATTAAGAAAACAACTGGCAGACTGATAGGACAATGGGTGAAAGAAATGAAGAGGGACAAAAAAGGgaaggaagaaagggagggtggagggagaaggga---------------ggaagCAAGAGGAAAGAacaaatgaacatccaaacggccaaacagcatataaaacatgctcaacctcgtaagccatcaaattt i cerAty1.NW_012001120v1 I 1 C 0 s chlSab2.chr23 79660913 323 + 82825804 ttgttagtagagatggggtttcactgtgttaggcaagatggtctcgatctcctgacctcgtgatccgcccacctcggcctcccaaagtgctgggattacaggtgtgaaccactgggcccagcctaaagtaaaataaaatttttttaaaaattaagaaaacagctggcagaccgataggacaatgggtgaaataaatgaagagggacaaaaaagggaaGGAAGAAAG-------GGAGGGAGGAGGGA---------------TGAAGCGAGAGGAAAGAacaaatgaacatccaaatggccaaaaggtatataaaacatgctcaacctcgtaagccatcaaattt i chlSab2.chr23 I 1 C 0 s manLeu1.NW_012103876v1 1620642 323 - 1768974 tttttagtagagacggggtttcactgtgttaggcaaaatggtctcgatctcctgacctcgtgatccgcccacctcggcctcccaaagtgctgggattacaggtgtgaaccactgggcccggcctaaagtaaaataaaaTTTTTTTAAAAATTAAGAAAACAGCTGGCAGACCGATAGGACAATGGGTGAAATAAATGAAGAGGGACAAAAAAGggaaggaagaaag-------agagggaggaggga---------------ggaagcgagaggAAAGAacaaatgaacatccaaatggccaaaaggtatataaaacatgctcaaccttgtaagccatcaaattt i manLeu1.NW_012103876v1 I 1 C 0 s colAng1.NW_012117422v1 108331 330 - 815015 ttcttagtagagatggggtttcactgtgttagccaagatggtctcgatctcctgacctcatgatctgcccacctcggcctcccaaagtcctgggattacaggtgtgaaccactgggcccagccTAAAGTAAAATAAAATTTTTTTAAAAATTAAGAAAACAGCTGGCAGACCGATAGGACAATGGGTGAAagaaatgaagagggacaaaaaagggaaggaagaaagggagggaggagggaggagaga---------------ggaagcgagaggaAAGAacaaatgaacatccaaatggccaaaaggcatataaaacatgcccaacctcataagccatcaaattt i colAng1.NW_012117422v1 I 1 C 0 e nomLeu3.chr2 160310246 2456 - 163208435 M a score=7461407.000000 s hg38.chr5_KI270795v1_alt 94043 1975 + 131892 aaaccacagtgagaaatcaatattacacctaccagaatggctaaaattaaaaacactgttgataccaagtttgggcaagaatgtggagtaactgaaacttcatatacta---ttgggaatgtaaaatagcacaactacttt----ggaaaacccctgggtaatacctactaaaggagaccacacctgtgatccccacattccactcctgtgcatagacccaaaagaactgtgcactgtgcacgtgttcaccaaatgacgtgcga-cgtgcactagaatgtttataccagcacccttcacaatagccccaacttccaacaggagaatggataagtacctctcaatatatttatagagtaaagttcttacagcactgaaaatggattaacagccgccatgcacagttggtgaatctcagcaacataatgttgagcagaagcagccagacacaaatgaatgcgtacagcacgattgtgtttctgcgaagccctaaaacaggccaaagaaacatctggtgagaagtcaggatagcgatgatcttagtgctctgggggagggtggctctggtattattctatttcttgatctgagggctggtgtcccagacgtattcactctatgataatttaccaagctgccctctggggactggtggcttctctgtatgaatattacacttcaatt-aaaa------------taacaaaaa-cctaacagtcaaattcagaaatgagtaaggccgggcacggtggctcatgcctgtaatcccagcactttgggaggccgaggcaggcagatcacctgaggtcaggagtttg-agaccagcctggccaacacggtgaaaccc-gtctctagtaaaactacaaaaattagccgggtgtggtggcacgtgcccgtaatctcagctatttgggaggctgaggcaggagacttgcttaaacttgggaggtggaagttgcagtgagccgagatcacgccactgcactccagcctgggtgacagagtgagattctgtcttaaaa----aaaaa---------aaagcaaa-----cgagcaaaggacttgaatggacatttttccatactcagcatcactaatcattaggcagatggaaatgacaacgagattccatttcactcctactacattgactagtatcaaagaaaacccagaaaataacgaatgttggtgaagatgtggagagactggaacccttgtgcgctgctggtgggaatgtaaaatagtgccgcccctctag--taaacagtaaggcagttcctcg-gaaattatacctagggacgctccagcaattccacttctgggtttatatcccccaaaaattgaaagcaaggaaataaagagacac----ccatccctgttgatagccgtgttattcaaaatagataaaaggtgggagcaactcatatccattgacagacgaagggatcaataacatgcggtatgtacatacaatggaatattattcaaccttacaaaaaaagggtatttggacctaggcctcaacataaatgaatcttgaggactatgctgaatgacataaggcagacacaaaaggacaaatattgtgtatttccactcacatgaagtacctagtatatttcatagagacacaaagtagaatgtg--tctatgaagtatacaggggcatgcttgaagtatactaggtctagtaggaagccaggggctggagggaggagggaaaggg----gagtggctg-tttaacaggcagagtttcagtgaggatgaggaacgacctccggagatgatggaggtgatggtagcatgc--caattgaaggctcttaacattactgaacacttgaaatgatgcagatgggaaatttcgtgttacacatattttatcacagttTTTCAGGTAGTTGCCTTTTAAAAAAGTTCCTTCAGAATTTGTTTTCCTCCTTGACATGCATATTTGAACACTGGAGACAAAATTTCTGTATCGTTCTTGGTCAGCAAAATGTTTTGTAAAAGTGTCAGGAGGA s gorGor5.CYUI01000356v1 72863 1986 + 152767 aaaccacagtgagaaatcaatattacacctaccagaatggctaaaattaaaaacactgttgataccaagtttgggcaagaatgtggagtaactgaaacttcatatacta---ttgggaatgtaaaatagcacaactacttt----ggaaagcccttgggtaatacctactaaaggagaccacacctgtgatccccacattccactcctgtgcatagacccaaaagaactgtgcactgtgcgcgtgttcaccaaatgacgtgcga-cgtgcgctagaatgtttgtaccagcacccttcacaatagccccagcttccaacaggagaatggataagtacctctcagtatattt-tagagtaaagttcttacagcactgaaaatggattcacagccgccatgcacagttggtgaatctcagcaacataatgttgagcagaagcagccagacacaaatgaatgcatacggcacaattctgtttctgtgaagctctaaaacaggccaaagaaacatctggtgagaagtcaggatag-gatgatcttagtgctctgggggagggtggctctggtattattctatttcttgatctgagggctggtgtcccagacgtattcactctacgataatttaccaagctgccctctggg-attggtggcttctctgtatgaatattacacttcaatt-aaaaaaac-------ataacaaaaa-cctaacaatcaaattcagaaatgagtaaggccgggcacggtggctcacgcctgtaatcccagcactttgggaggccgaggcaggcagatcacctgaggtcaggagttcg-agaccagcctggccaacatggtgaaaccc-gtctctactaaaactacaaaaattagccgggtgtggtggcacgtgcccgtaatctcagctatttgggaggctgaggcaggagacttgcttaaacttgggaggtggaagttgcagtgagccgagatcacgccactgcactccagcctgggtgacagagtgagactctgtcttaaaa----aaaaa---------aaaaaaaaaaaaacgagcaaaggacttgaatggacatttttccatactcagcatcactaatcattaggcagatggaaatgacaacgagattccatttcactcctactacattgactagtatcaaagaaaacccagaaaataacgaatgttggtgaagatgtggagagactggaacccttgtgtgctgctggtgggaatgtaaaatagtgccgcccctctag--aaaacagtaaagcagctcctcg-gaaattatacctagggacgctccagcaattccacttctgggtttatatcccccagaaattgaaagcaaggaaataaagagacactcacccatccctgtcgatagccgtgttgttcaaaatagacaaaaggtgggagcaactcatatccattgacagactaagggatcaataacatgcggtatgtacatacaatggaatattattcaaccttacaaaaaaaggctatttggactcaggcctcaacataaatgaatcttgaggactatgctgagtgacataaggcagacacaaaaggacaaatattgtgtatttccactcacatgaggtacctagtatatttcatagagacacaaagtagaatgtg--tctatgaagtatacaggggcatgcttgaagtatactaggtatagtaggaagccaggggctggagggtggagggaaaggg----gagtggctg-cttaacaggcagagtttcagtgaggatgaggaaagacctccggagatgatggaggtgatggtagcatac--cgattgaaggttcttaacattactgaacacttgaaatgatgcagatgggaaatttcgtgttatacatattttatcacaattTTTCAGGTAGTTGCCTTTTAAAAAAGTTCCTTCAGAATTTGTTTTCCTCCTTGACATGCATATTTGAATACTGGAGACAAAATTTCTGTATTGTTCTTGGTCAGCAAAATGTTTTGTAAAAGTTTCAGGAGGA i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160312702 1977 - 163208435 aaaccacagtgagaaaccaatattatacctactagaatggctaaaattaaaaacactgttgataccaagtttgggcaagaatgtggagtaaccgaaacttcatatacta---ttgggaatgtaaaatagcacaactacttt----ggagaacccttgggcaatacctactaaaggagaccacacctgtgatccccacatgccactcctgtgcatagacccaaaagaattgtgcactgtgcatgtgttcaccaaat-------ga-tgtgcaccagattgttta-atcagcacccttcacaacagccccaacttccaacaggagaatggataagtacctctcagtgtatttatggagtaaaattctcacagcactgaaaatggattaacagccgccatgcacagttggtgaatctcagcaac---atgctgagcagaagcagccagacacaaatgaacgcgcactgcacgactgtgtttctgcgaagctctgaaacgggcaaaagaaacatctggttagaagtcaggatagcgattctcttagtgctctgggggacggtggctctggtaatattctatttcttgatctgagggctggtgtcccagacgtattcactctacgataatttaccaagctgccctctggggattggtgtcttctctgtatgaacgttacacttcaatt-aaaaAAACATactcaacaacaaaaa-tgtaacaatcaaattaagaaatgagcaaggacaggcacggtggctcacacctgtaatcccagcactttgggaggccgaggcgggcagatcacctgaggtcaggagttcg-agaccagcctggccaacatggtgaaaccctgtctctaataaaaatacaaaaattagccgggtgtggtggtgcgtgcctgtaatctcggctatttgggaggctgaggcaggagacttgcttaaacctgggaggtggaagttgcagtgagccaagatcacgccactgcactccagcctgggtgacagagtgagactctgtcttaaaa----aagca---------aa-----------caagcaaaggacttgaatggacatttctccatactcagcatcactaatcattaggcagatggaaatgacaacaagattccatttcactcctactacattgactagtatcaaagaaaccccagaaaataacaaatgttggtgaggatgtggagagactagaacccttgtgcactgctggtgggaatgtaaaatagtgccgcccctctagaaaaaacagtaaggcagttcctcg-gaaattatacctagggacactccagcaattccacttctggatatatatcccccaaaaatggaaagcaaggaaataaagagacactcgcccatccctgtcgat-tccgtgttattcacgatagataaaaggtgggagcaactcatatccattgacagatgaagggatcaataacctgtggtatgtacatacaatggactattactcaaccttacaaaaaaagggtgtttggacccaggcctcaacataaatgaaccttgaggactatgctgagtgacataaggcagacacaaaaggacatacattatatatttccactcacatgaggta-ctggtatacttcatagagacacaaagtagaatgtgcctctatgaagcatacaggggcatgcttgacgtatactaggtatagtaggaagccaggggctggaaggaggagggaaaggg----gagtggctg-tttaacaggcaaggtttcagtgaggatgaggaaagagctccggagatgatggaggcgatggtagcatac--cagtcgaaggttcttaatattactgaacacttgaaatgatgaatatgggaagtttcgtgttatacatattttatcacaattTTTCAGGTAGTTGCCTTTTAAAAAAGTTCCTTCAGAATTTGTTTTCCTCCTTGACATGCATATTTGAATATTGGAGACAAAATTTCTGTACTGTTCTTGGTCAGCAAAATGTTTTGTAAAAGTTTCAGAAGGA i nomLeu3.chr2 M 2456 C 0 s rheMac8.chr6 3594223 1991 - 180051392 aaaccacagtgagaaaccaatattacacctaccagaatggctaaaattaaaaacactgttgataccacgtttgggcaagaatgtggagtaattgaaacttcatatactacttttgggaatgtaaaatagcacaactacttt----ggaaaacccttgggtaatacctactaaaggagaccgcacctgtgatccccacattccactcctatgcatagacccaaaagaactgtgcactgtacatgtgttcaccaaat-------ga-tgtgcactagagtgtttgtatcagcacaattcacagtagccccaacttccaacaggagaatggataagtacctctcagtgtatttatagagtaaaattcttacagcactgaaaatggattaacagctaccatgcacagttggtgaatctcagcaacataatgctgagcagaagaagccagacacaaatgaatgcgtactgcacgattctgtttctgtgatgctctaaaacaagcaaaagaaacatctggtgagaagtcaggatagcaattatcttagtgctctgggggagggtggctctggtaatattctatttcttgatctgagggctggtgt-ccagacatattcactctatgataatttaccaagctgccctctggggattggtggtttctctgtatgtatattgtacttcaatt-aaaaAAAA-TAGtcaacaacaaaaa-cctaacaatcaaattaagaaatgagcaaggccaggtgcggtggctcacacctgtaatcccagcactttgggcggctaaggcgggcagatcacctgaggacaggagttcacagaccagcctggccaacatggtgaaaccctgtctctactaaaaatacaaaaattagcagggcgtggtggcatgtgcctgtaat---agctcttcgggaggctgaggcaggagaattgctt-agcccaggaggtggaagttgcagtgagccgagatcgtgccactgcactccagcctgggtgacagagtgagactctgtcgttaaa----aaaag---------aaaaaaagcaaa-tgaggaaaggacttgaacagacatttctccatactcagcatcactaatcattagggagatggaaatgacaatgagataccatttcactcctactacattgactaatatcaaagaaaa-tcagaaaataacgaatgtgggtgaggatgtggagaaactggaactgttgtgcactgctggtgggaatgtaaaatagcgccgcccctctag--gaaacagtatggcagttcttcgagaaattatacctagggacgctccagcaattccacttctgggtatatatccccccaaaatcgaaagcaaggaaataaagagacactcgcccgcccatgtccatagctgtgttattcacagtagataaaaggtgggagcaactcatatccatggacagacgaagggatcaataacatgtggtatgtacatacaatggaatattattcaaccttacaaaaaaaggacgtttggacccaggcctcaacataaatgaaacttgaggaccatgctgagtgacataaggcagacacaaagggacaaatattgtatgtttccacttatatgaggtacctagtatacttcatagagacacaaagtagaatgtgtctctgtgacgcatacaggggcagacttgaagtatactaggtatggtaggaag-caggggctagagggaggaaggaaaggg----gagtggctgttttaacaggcagagtttcagtggggatgaggaaggagctccggagatgatggtggtgatggtagcacacaccaatcgaaggttcttaacattactgaagacttgaaatgatgacgatgggaaatttcatgttttacatattttatcacaactTTTCAGGTAGTTGCCTTTTTAAAAAGTTCCTTTAGAGTTTGTTTTCCTCCTTGACATGCATATTTGAATATTGGAGACAAAATTTCTGTACTGTTCTTGGTCAACAAAATGTTTTGTGAAAGTTTCAGGAGGA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3781224 1992 - 181584905 aaaccacagtgagaaaccaatattacacctaccagaatggctaaaattaaaaacactgttgataccacgtttgggcaagaatgtggagtaattgaaacttcatatactacttttgggaatgtaaaatagcacaactacttt----ggaaaacccttgggtaatacctactaaaggagaccgcacctgtgatccccacattccactcctatgcatagacccaaaagaactgtgcactgtacatgtgttcaccaaat-------ga-tgtgcactagagtgtttgtatcagcacaattcacagtagccccaacttccaacaggagaatggataagtacctctcagtgtatttatagagtaaaattcttacagcactgaaagtggatgaacagctgccatgcacagttggtgaatctcagcaacataatgctgagcagaagaagccagacacaaatgaatgcgtactgcacgattctgtttctgtgacgctctaaaacaagcaaaagaaacatctggtgagaagtcaggatagcaattatcttagtgctctgggggagggtggctctggtaatattctatttcttgatctgagggctggtgt-ccagacatattcactctatgataatttaccaagctgccctctggggattggtggtttctctgtatgtatattgtacttcaatt-aaaaAAAA-TAGtcagcaacaaaaaccctaacaatcaaattaagaaatgagcaaggccaggtgcggtggctcacacctgtaatcccagcactttgggcggctaaggccggcagatcacctgaggacaggagttcacagaccagcctggccaacatggtgaaaccctgtctctactaaaaatacaaaaattagcagggcgtggtggcatgtgcctgtaat---agctcttcgggaggctgaggcaggagaattgctt-agcccaggaggtggaagttgcagtgagccgagatcgtgccactgcactccagcctgggtgacagagtgagactctgtcgttaaa----aaaag---------aaaaaaagcaaa-tgaggaaaggacttgaacagacatttctccatactcagcatcactaatcattagggagatggaaatgacaatgagataccatttcactcctactacattgactaatatcaaagaaaa-tcagaaaataacgaatgtgggtgaggatgtggagaaactggaactgttgtgcactgctggtgggaatgtaaaatagcgccgcccctctag--gaaacagtatggcagttcctcgagaaattatacctagggacgctccagcaattccacttctgggtatatatccccccaaaattgaaagcaaggaaataaagagacactcgcccgcccatgtccatagctgtgttattcacagtagataaaaggtgggagcaactcatatccatggacagacgaagggatcaataacatgtggtatgtacatacaatggaatattattcaaccttacaaaaaaaggacgtttggacccaggcctcaacataaatgaaacttgaggaccatgctgagtgacataaggcagacacaaagggacaaatattgtatgtttccacttatatgaggtacctagtatacttcatagagacacaaagtagaatgtgtctctgtgacgcatacaggggcagacttgaagtatactaggtatggtaggaag-caggggctagagggaggaaggaaaggg----gagtggctgttttaacaggcagagtttcagtggggatgaggaaggagctccggagatgatggaggtgatggtagcacacaccaatcgaaggttcttaacattactgaagacttgaaatgatgacgatgggaaatttcatgttttacatattttatcacaactTTTCAGGTAGTTGCCTTTTTAAAAAGTTCCTTTAGAGTTTGTTTTCCTCCTTGACATGCATATTTGAATATTGGAGACAAAATTTCTGTACTGTTCTTGGTCAACAAAATGTTTTGTGAAAGTTTCAGGAGGA i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3802363 1991 + 4899514 aaaccacagtgagaaaccaatattacacctatcagaatggctaaaattaaaaacactgttgataccacgtttgggcaagaatgtggagtaattgaaacttcatatactacttttgggaatgtaaaatagcacaactacttt----ggaaaacccttgggtaatacctactaaaggagaccgcacctgtgatccccacattccactcctatgcatagacccaaaagaactgtgcactgtacatgtgttcaccaaat-------ga-tgtgcactagagtgtttgtatcagcacaattcacagtagccccaacttccaacaggagaatggataagtacctctcagtgtatttatagagtaaaattcttacagcactgaaaatggatgaacagctgccatgcacagttggtgaatctcagcaacataatgctgagcagaagaagccagacacaaatgaatgcgtactgcacgattctgtttctgtgacgctctaaaacaagcaaaagaaacatctggtgagaagtcaggatagcaattatcttagtgctctgggggagggtggctctggtaatattctatttcttgatctgagggctggtgt-ccagacatattcactctatgataatttaccaagctgccctctggggattggtggtttctctgtaggtatattgtacttcaatt-aaaaAAAA-TAGtcaacaacaaaaa-cctaacaatcaaattaagaaatgagcaaggccaggtgcggtggctcacacctgtaatcccagcactttgggcggctaaggcgggcagatcacctgaggacaggagttcacagaccagcctggccaacatggtgaaaccctgtctctactaaaaatacaaaaattagcagggcgtggtggcatgtgcctgtaat---agctcttcaggaggctgaggcaggagaattgctt-agcccaggaggtggaagttgcagtgagccgagatcgtgccactgcactccagcctgggtgacagagtgagactctgtcgttaaa----aaaag---------aaaaaaagcaaa-tgaggaaaggacttgaacagacatttctccatactcagcatcactaatcattagggagatggaaatgacaatgagataccatttcactcctactacattgactaatatcaaagaaaa-tcagaaaataacgaatgtgggtgaggatgtggagaaactggaactgttgtgcactgctggtgggaatgtaaaatagcgccgcccctctag--gaaacagtatggcagttcctcgagaaattatacctagggacgctccagcacttccacttctgggtatatatccccccaaaattgaaagcaaggaaataaagagacactcgccctcccatgtccatagctgtgttattcacagtagataaaaggtgggagcaactcatatccatggacagacgaagggatcaataacatgtggtatgtacatacaatggaatattattcaaccttacaaaaaaaggacgtttggacccaggcctcaacataaatgaaacttgaggaccatgctcagtgacataaggcagacacaaagggacaaatattgtatgtttccacttatatgaggtacctagtatacttcatagagacacaaagtagaatgtgtctctctgaagcatacaggggcatacttgaagtatactaggtatggtaggaag-caggggctagagggaggaaggaaaggg----gagtggctgttttaacaggcagagtttcagtggggatgaggaaggagctccggagatgatggaggtgatggtagcacacaccaatagaaggttcttaacattactgaagacttgaaatgatgacgatgggaaatttcatgttttacatattttatcacaactTTTCAGGTAGTTGCCTTTTTAAAAAGTTCCTTTAGAGTTTGTTTTCCTCCTTGACATGCATATTTGAATATTGGAGACAAAATTTCTGTACTGTTCTTGGTCAACAAAATGTTTTGTAAAAGTTTCAGGAGGA i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012001120v1 3526553 1976 - 3647740 aaaccacagtgagaaaccaatattacacctaccagaatggctaaaattaaaaacactgttgataccacgtttgggcaagaatgtggagtaattgaaacttcatatactacttttgggaatgtaaaatagcacaactacttt----ggaaaacccttgggtaatacctactaaaggagaccacacctgtgatccccacattccactcctatgcatagacccaaaagaactgtgcactgtacatgtgttcaccaaat-------ga-tgtgcactagagtgtttgtatcagcacaattcacagtagccccaacttccaacaggagaatggataagtacctctcagtatatttatagagtaaaattcttacagcactgaaaatggatgaacagctgccatgcacagttggtgaatctcagcaacataatgctgagcagaagaagccagacacaaatgaatgcgtactgcacgattctgtttctgtgaagctctaaaacaagcaaaagaaacatctggtgagaagtcaggatagcaattatcttagtgctctgggggagggtggctctggtaatattctatttcttgatctgagggctggtgt-ccagacatattcactctatgataatttaccaagctgcccgctggagattggtggtttctctgtatgtatattgtacttcaattaaaaAAAAA-TAGtcaacaacaaaaa-cctaacaatcaaattaagaaatgagcaaggccaggtgcggtggctcacacctgtaatcccagcactttgggcggctaaggcgggcagatcacctgaggacaggagttcacagaccagcctggccaacatggtgaaaccctgtctctactaaaaatacaaaaattagcagggcgtggtggcatgtgcctgtaat---agctcttcgggaggctgaggcaggagaattgctt-agcccaggaggcggaagttgcagtgagccgagatcgcgccactgcactccagcctgggtgacagagtgagactctgtcgttaaa----aaaag---------aaaaaaagcaaa-tgaggaaaggacttgaacagacatttctccatactcagcatcactaatcattagggagatggaaatgacaatgagataccatttcactcctgctacattgactaatatcaaagaaaa-tcagaaaataacgaatgtgggtgaggatgtggagaaactggaaccgttgtgcactgctggtgggaatgtaaaatagcgtcgcccctctag--gaaacagtatggcagttcctcgagaaattatacctagggacgctccagcaattccacttctgggtatatatccccccaaaattgaaagcaaggaaataaagagacactcgcccgcccatgtccatagctgtgttattcacagtagataaaaggtgggagcaactcatatccatggacagacgaacggatcaataacatgtggtatgtacatacaatggaatattattcaaccttacaaaaaaaggacgtttggacccaggcctcaacataaatgaaacttgaggaccatgctgagtgacataaggcagacacaaagggacaaatattgtatgtttccacttatatgaggtacct----------------acacaaagtagaatgtgtctctgtgaagcatacaggggcatacttgaagtatactaggtatggtaggacg-caggggctagagggaggaaggaaaggg----gagtggctgttttaacaggcagagtttcagtggggatgaggaaggagctccggagatgatggaggtgatggtagcacaccccaatcgaaggttcttaacattactgaagacttgaaatgatgacgatgggaaatttcatgttatacatattttatcacaactTTTCAGGTAGTTGCCTTTTTAAAAAGTTCCTTTAGAGTTTGTTTTCCTCCTTGACATGCATATTTGAATATTGGAGACAAAATTTCTGTACTGTTCTTGGTCAACAAAATGTTTTGTACAAGTTTCAGGAGGA i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79661236 1998 + 82825804 aaaccacagtgagaaaccaatattacacctaccagaatggctaaaattaaaaacactgttgataccaagtttgggcaagaatgtggagtaactgaaacttcatatactgcttttgggaatgtaaaatagcacaactacttt----ggaaaacccttgggtaatacctactaaaggagaccacacctgtgatccccacattccactcctatgcataggcccaaaagaactgtgcactgtacatgtgttcaccaaat-------ga-tgtgcactagaatgtttatatcagcacaattcacaatagccccaacttccaacaggagaatggataagtacctctcagtatatttatagagtaaaattcttacagcactgaaaatggattaacagctgccatgcacagttggtgaatctcagcaacataatgctgagcagaagaaaccagacacaaatgaatgcgtatggcacgattctgtttctgtgacgctctaaaacaagccaaagaaacatctggtgagaagtcaggatagcaattatcttagtgctctgggggagggtggctctggtaatattctatttcttgatctgagggctggtgt-ccagacgtattcactctatgataatttactaagctgccctctggggattggtggtttctctgtatgtatattatacttcaatt-aaaaaaaa-tagtcaacaacaaaaa-cccaacaatcaaattaagaaatgagcaaggccaggtgcagtggctcacacctgtaatcccagcactttgggaggctgaggcgggcagatcacctgaggacaggagttcacagaccagcctggccaacatggtgaaaccctgtctctactaaaaatacaaaaattagccgggtgtggtggcatgtgcctgtaat---agctcttcgggaggctgaggcaggagaatcgctt-aacccagaaggtggaagttgcagtgagccgagatcgcgccactgcactccagcctgggtgacagagtgagactctgtcattaaacaacaacaa---------aaaaaaagcaaa-tgaggaaaggacttgaacagacatttctccatactcagcatcactaatcattagagagatggaaatgacaatgagataccatttcactcctgctacattgactaatatcaaagaaaa-ccagaaaataacgaatgtgggtgaggatgtggagaaactggaactgttgtgcactgctggtgggaatgtaaaagagtgctgcccctctag--gaaacagtatggcagttcctcgagaaattatacctagggacgctccagcaattccacttctgggtgtatat-cccccaaaattgaaagcaaggaaataaagagacactcgccggcccatgtccatagctgtgttattcacagtagataaaaggtgggagcaactcatatccatggacagacgaagggatcaataacatgtggtatgtacatacaatggaatattattcaaccttataaaaaaaggacgtttggacccaggcctcaacatagatgaacattgaggactatgctgagtgacataaggcagacacaaagggacaaatattgtatgtttccgcttatatgaggtacctagtatacgtcatagagacacaaagtagaatgTGTCTCTATGAAGCATACAGGGGCATACTTGAAGTATACTAGGTatggtaggaag-caggggctagagggaggaaggaaaggggagtgagtggctgttttaacaggcagagtttcagtggggatgaggaaggagctccggagatgatggaggcgatggtagcacacaccaattgaagtttcttaacattactgaagacttgaaatgatgaagatgggaaatttcatgttatacatattttatcacaacttttcaggtagttgcctttttaaaaaGTTCCTTTAGAGTTTGTTTTCCTCCTTGACATGCATATTTGAATATTGGAGACAAAATTTCTGTACTGTTCTTGGTTAACAAAATGTTTTGTAGCAGTTTCAGGAGGA i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1620965 1989 - 1768974 aaaccatagtgagaaaccaatattacacctaccagaatggctaaaattaaaaacactgttgataccaagtttgggcaagaatgtggagtaactgaaacttcatatactgcttttgggaatgtaaaatagcacaactacttt----ggaaaacccttgggtaatacctactaaaggagaccgcacctgtgatccccacactccactcctatgcatagacccaaaagaactgtgcactgtacatgtgttcaccaaat-------ga-tgtgcactagagtgttt-tatcagcacaattcacagtagccccagcttccaacaggagaatggataagtacctctcagtgtatttatagagtaaaattcttacagcactgaaaatggatgaacagctgccatgcacagttggtgaatctcagcaacataacgctgagcagaagaagccagacacaaatgaatgcgtactgcacgattctgtttctgtgaagctctaaaacaagcaaaagaaacatctggtgagaagtcaggatagcaattatcttagtgctctgggggagggtggctctggtaatattctatttcttgatctgagggctggtgt-ccagatatattcactctatgataatttaccaagctgcccgctggagattggtggtttctctgtatgtatattgtacttcaatt-aaaaaaag-tAGtcaacaacaaaaa-cctaacaatcaaattaagaaatgagcaaggccaggtgcggtggctcacacctgtaatcccagcactttgggcggctaaggcgggcagatcacctgaggacaggagttcacagaccagcctggccaacatggtgaaaccctgtctctactaaaaatacaaaaattagcagggcgtggtggcatgtgcctgtaat---agctcttcgggaggctgaggcaggagaattgctt-agcccaggaggtggaagttgcagtgagccgagatcgcgccactgcactccagcctgggtgacagagtgagactctgtcgttaaa----aaaag---------aaaaaaagcaaa-tgaggaaaggacttgaacagacatttctccatactcagcatcactaatcattagggagatggaaatgacaatgagataccatttcactcctgctacattgactaatatcaaagaaaa-tcagaaaataacgaatgtgggtgaggatgtggagaaactggaaccgttgtgcactgctggtgggaatgtaaaatagcgccgcccctctag--gaaacagtatggcagttcctcgagaaattatacctagggacgctccagcaattccacttctgggtatatatccccccaaaattgaaagcaaggaaataaagagacactcgcccgcccatgtccatagctgtgttattcacagtagataaaaggtgggagcaactcatatccatggacagacgaagggatcaataacatgtggtatgtacatacaatggaatattattcaaacttacaaaaaaaggacgtttggacccagggctcaacata-atgaaacttgaggaccatgctgagtgacataaggcagacacaaagggacaaatattgtatgtttccacttatatgaggtacctagtatacttcatagagacacaaagtagaatgtgtctctgtgaagcatacaggggcatacttgaagtatactaggtatggtaggacg-caggggctagagggaggaaggaaaggg----gagtggctgttttaacaggcagagtttcagtggggatgaggaaggagctccggagatgatggaggtgatggtagcacacatcaatcgaaggttcttaacattactgaagacttgaaatgatgacgatgggaaatttcatgttatacatattttatcacaactTTTCAGGTAGTTGCCTTTTTAAAAAGTTCCTTTAGAGTTTGTTTTCCTCCTTGACATGCATATTTGAATATTGGAGACAAAATTTCTGTACTGTTCTTGGTCAACAAAATGTTTTGTACAAGTTTCAGGTGGA i manLeu1.NW_012103876v1 C 0 C 0 s colAng1.NW_012117422v1 108661 2001 - 815015 aaaccacagtgagaaaccaatattacacctaccagaatggctaaaattaaaaacactgttgataccaagtttgggcaagaatgtggagtaactgaaacttcatatactacttttgggaatgtaaaatagcacaactactttaaggggaaaacccttgggtaatacctactaaaggagaccgcacctgtaatccccacgttccactcctatgcatagacccaaaagaactgtgcactgtacatgtgttcaccaaat-------gattgtgcactagagtgtttatatcagcacaattcacaatagccccaacttccaacaggagaatggataagtacctctcagtgtatttatagagtaaaattcttacagcactgaaaatggactaacagctgccatgcacagttggtgaatctcagcaacataatgctgagcaggagaagccagacacaaatgaatgtgtactgcacgattctgtttctgtgaagctctaaaacaagcaaaagaaacatctggtgagaagtcaggatagcgattatcttagtgctctgggggagggtggctctggtaatattctatttcttgatctaagggctggtgt-ccagatgtattcactctatgataatttaccaagctgcctgctggagattggtggtttctctgtaggtatattatacttcaatt--aaaaAAA-TAGtcaacaacaaaaa-cctaacaatcaaattaagaaatgagcaaggccaggtgcagtggctcacacctgtaatcccagcactttgggaggctgaagcgggcagatcacctgaggacaggagttcacagaccagcctggccaacacggtgaaaccttgtctctactaaaagtacaaaaattagccgggtgtggtggcatgtgcctatagc---agctcttcgggaggctgaggcaggagaattgctt-aacccaggaggtggaagttgcagtgagccgagatcgtgccactgcactccagcctgggtgacagagcaagactctgtcttaaaa----aaaaaaagaaaagtaagaaaagcaaa-tgagcaaaggacttgaatagacatttctccatactcagcatca-taatcattagggagatggaaatgacaatagaatatcatttcactcctactacattgactaatatcaaagaaaa-ccagaaaataatgaatgtcggtgaggatgtggagaaactggaactgttgtgcactgctggt-ggaatgtaaaatagtgccgcccctctag--aaaacagtatggcacttcctcaagaaattatacctcgggacgctccagcaattccacttctgggtatatatccccccaaaattgaaagcaaggaaataaagagacactcgcccgcccacgtccatagccatgttattcacagtagataaaaggtgggagcaactcatatccattgacagatgaagggatcaataacatgtggtatgtacatacaatggaatattattcaaccctataaaaaaaggacatttggacccaggcctcaacataaatgaaccttgaggactatgctgagtgatgtaagacagacacaaagggacaaattttgtatgtttccacttatatgaggtacctagtatacttcatagagacacaaagtagaatgtgtctctatgaagcatacaggggcatacttgaagtatactaggtatggtagggag-caggggctggagggaggaaggaaaggg----gagtggctgttttaacaggcagagtttcagtggggatgaggaaggagctccggagatgatggaggcgatggtaacacacaccgattgaaggttcttaacgttactgaagacttgaaatgatgaagat-ggaaatttcatgttatacatattttatcacaactTTTCAGGTAGTTGCCTTTTTAAAAAGTTCCTTTAGAGTTTGTTTTCCTCCTTGACATGCATATTTGAATATTGGAGACAAAATTTCTGTACTGTTCTTGGTCAACAAAATGTTTTGCAAAAGTTTCAGGAGGA i colAng1.NW_012117422v1 C 0 C 0 a score=310183.000000 s hg38.chr5_KI270795v1_alt 96018 54 + 131892 ggccaggtgcggtggctcacgcctgtaatcccagcactttgagaggccgaggtg s panTro5.chr5 3419752 54 - 181907262 ggccgggtgcggtggctcaggcctgtaatcccagcactttgagaggccgaggtg i panTro5.chr5 N 0 C 0 s panPan2.chrUn_NW_014024182v1 1907 54 - 22698 ggccgggtgcggtggctcaggcctgtaatcccagcactttgagaggccaaggtg i panPan2.chrUn_NW_014024182v1 N 0 C 0 s gorGor5.CYUI01000356v1 74849 54 + 152767 ggccaggtgcggtggctcacgcctgtaatcccagcactttgagaggccgaggtg i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160314679 54 - 163208435 ggccaggcacggtggctcacacctgtaatcccagcactttgagaggccgaggtg i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3596214 54 - 180051392 ggccaggcgcagtggctcacgcctataatcccagcactttgagaggccgaggtg i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3783216 54 - 181584905 ggccaggcgcagtggctcacgcctataatcccagcactttgagaggccgaggtg i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3804354 54 + 4899514 ggccaggcgcagtggctcacgcctataatcccagcactttgagaggccgaggtg i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012001120v1 3528529 54 - 3647740 ggccaggcgcagtggctcacgcctataatcccagcactttgcgaggccgaggtg i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79663234 54 + 82825804 ggccgggcacagtggctcacgcttataatcccagcactttgagaggcggaggtg i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1622954 54 - 1768974 ggccaggcgcagtggctcacgcctataatcccagcactttgagaggccgaggtg i manLeu1.NW_012103876v1 C 0 C 0 s colAng1.NW_012117422v1 110662 54 - 815015 ggccgggcgctgtggctcacgcctataatcccagcactttgagaggccgaggtg i colAng1.NW_012117422v1 C 0 M 945 a score=3687120.000000 s hg38.chr5_KI270795v1_alt 96072 790 + 131892 ggcagatcacctgaggtcaggagttcaagaccagcctggccaacaaggtgaaaccctgtctctactaaaaatacaaaaattagccgggtgtgttggtgcacaactgtagttacagctatttgggaggctgaggcaggagaatcgcttgaacctgggaggcggaggttgcagtgagctgagatcgcaccactgcactccagcctgggtgacagagcaagaccctgtctca-----aaaataaaatagtaaaaTTTAAAATTCAGGACCTCCTCACCAGAGCTATACTTTGAGTGCACAGTAGCCATATGTCTATACTGCAGAAAACATTTCCATCCTCCCAGAACCTTCTCTCATGCAGCTTCTGTGAGCCTCGCATCAGTTGTGTTCACTGAACTCATCTAACTCAAAGCACATGCATCAAAGCTGGAATTTCAGGGTTATCGGTTTGCAGGTGAGAGCCGTAATGGTCCAGTGGAAGTGTACAGCTGGAAGGGAATGTCGTCAGCTCCTCCCTCTCACCTGAAGGCTCTCGACTATGAGCCGTGCCTTGTTGACAGCCTCTGAGTCCACAGAGCACAGGGAGAATCTGAGGACACAG--GACAAGGCAGGGGACCTTGTGTCCTCCACGTGGTTGCACATAGAGTAGAAGAGCTGGGTGAGTAACTCTCTGGAATCACCTTTCTGCTGATGTTTGTGTCTCTACAGATGGGCTCAAGGACAGCTTGCCTGACTGCAGCCATAAGGATGAAGCCTCTTCAGGTAGAG---G-ACTCCAGGTGGGGCCTGTGCAGAGGGTTC s panTro5.chr5 3419806 795 - 181907262 ggcggatcacctgcggtcaggagtttaagaccagcctggccaacatggtgaaaccctgtctctactaaaaatacaaaaattagccgggtctgttggtgcacaactgtagttccagctatttgggaggccgaggcaggagaatcgcttgaacctgggaggcggagtttgcagtgagctgaggtcgcatcactgcactccagcctgggcaacagagcaagaccctgtctca-----aaaataaaatagtaaaaTTTAAAATTCAGGACCTCCTCACCAGAGCTATACTTTGAGTGCACAGTAGCCATATGTCTATACTGCAGAAAACATTTCCATCCTCCCAGAACCTTCTCTCACGCAGCTTCTGTGAGCCTCGCATCAGTTACGTTCACTGAGCTGATCTAACTCAAAGCACATGCATCAAAGCTGGAACTTCAGGGTTATCGGTTTGCAGGTGAGAGGCGGAATGGTCCAGTGGAAGTGTACAGCTGGAAGGGAATGTCGTCAGCTCCTCCCTCTCACCTGAAGGCTCTCAACTGTGAGCCGTGCCTTGTTGACAGCCCCTGAGTCCACAGAGCACAGGGAGAATCTGAGGACACAGAGGACAAGGCAGGGGACCTTGTGTCCTCCACGTGGTTGCGCATAGAGTGGAAGAGCTGGGTGAGTAACTCTCTGGAATCACCTTTCTCCCGATGTTTGTGTCTCTACAGATGGGCTCAAGGACAGCTTGCCTGACTGCAGCCATAAGGATGAAGCCTCTTCAGGTAGAGAAGG-ACTCCAGGTGGGGCCTGTGCAGAGGGTTC i panTro5.chr5 C 0 C 0 s panPan2.chrUn_NW_014024182v1 1961 795 - 22698 ggcggatcacctgcggtcaggagtttaagaccagcctggccaacatggtgaaaccctgtctctactaaaaatacaaaaattagccgggtctgttggtgcacaactgtagttccagctatttgggaggccgaggcaggagaatcgcttgaacctgggaggcggagtttgcagtgagctgagatcgcatcactgcactccagcctgggcaacagagcaagaccctgtctca-----aaaataaaatagtaaaaTTTAAAATTCAGGACCTCCTCACCAGAGCTATACTTTGAGTGCACAGTAGCCATATGTCTATACTGCAGAAAACATTTCCATCCTCCCAGAACCTTCTCTCACGCAGCTTCTGTGAGCCTCGCATCAGTTACGTTCACTGAGCTGATCTAACTCAAAGCACATGCATCAAAGCTGGAACTTCAGGGTTATCGGTTTGCAGGTGAGAGGCGGAATGGTCCAGTGCAAGTGTACAGCTGGAAGGGAATGTCGTCAGCTCCTCCCTCTCACGTGAAGGCTCTCAACTGTGAGCCGTGCCTTGTTGACAGCCCCTGAGTCCACAGAGCACAGGGAGAATCTGAGGACACAGAGGACAAGGCAGGGGACCTTATGTCCTCCACGTGGTTGCGCATAGAGTGGAAGAGCTGGGTGAGTAACTCTCTGGAATCACCTTTCTGCCGATGTTTGTGTCTCTACAGATGGGCTCAAGGACAGCTTGCCTGACTGCAGCCATAAGGATGAAGCCTCTTCAGGTAGAGAAGG-ACTCCAGGTGGGGCCTGTGCAGAGGGTTC i panPan2.chrUn_NW_014024182v1 C 0 C 0 s gorGor5.CYUI01000356v1 74903 793 + 152767 ggcggatcacctgaggtcagaagttcaagaccagcctggccaacaaggtgaaaccctatctctactaaaaatacaaaaattagctgggtgtgttggtgcacaactgtagttccagctatttgggaggctgaggcaggagaatcgcttgaacctgggaggcggagattgcagtgagctgagatcgcaccactgcactccagcctgggtgacagagcaagaccctgtctca-----aaaataaaatagtaaaaTTTAAAATTCAGGACCTCCTCACCAGAGCTATACTTTGAGTGCACAGTAGCCATATGTCTATACTGCAGAAAACATTTCCATCCTCCCAGAACCTTCTCTCATGCAGCTTCTGTGAGCCTCGCATCAGTTATGTTCACTGAACTCATCTAACTCAAAGCACATGCATCAAAGCTGGAATTTCAGGGTTATCGGTTTGCAGGTGAGAGCCGTAATGGTCCAGTGGAAGTGTACAGTTGGAAGGGAATGTCGTCAGCTCCTCCCTCTCACCTGAAGGCTCTCAACTGTGAGCCGTGCCTTGTTGACAGCCTCTGAGTCCACAGAGCACAGGGAGAATCTGAGGACACAG--GACAAGGCAGGGGACCTTGTGTCCTCCACGTGGTTGCACATAGAGTAGAAGAGCTGGGTGAGTAACTCTCTGGAATCACCTTTCTGCTGATGTTTGTGTCTCCACAGATGGGCTCAAGGACAGCTTGCCTAACCGCAGCCATAAGGATGAAGCCTTTTCAGGTAGAGAAGG-ACTCCAGGTGGGGCCTGTGCAGAGGGTTC i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160314733 792 - 163208435 ggcggatcacctgaggtcaggagttcaagaccagcctgaccaacatggtgaaaccctgtctctactaaaaatac--aaattagccaggtgtgttggtgcacaactgtagttccagctatttgggaggctgaggcaggagaatcgcttgaacctgggaggcggaggttgcagtgagctgagatcatgccaatgcactccagcctgggtgacagagtgagactctgtctca-----aaaataaaatagtaaaaTTTGAAATTCAGGACCTCCTCACCAGAGCCATACTTTGAGTGCACAGTAGCCATATGTCTATACTGCAGAAAACATTTCCATCCTCCCAGAACCTTCTCTCGTGCAGCTTCTGTGAGCCTCGCATCAATCATGTTCACTGATCTCATCTAACTCAAAGCACATGCATCAGAGCTGGAATTTCGGGGTGATCAGTTTGCAGGTGAGAGCCGTAATGGTCCACTGGAAGTGTACAGTTGGAAGGGAATGTCTTCAGCTCCTCCCTCTCACCTGAAGGCTCTCAACTGTGAGCCGTGCCTTGTTGACAGCCTCTGAGTCCACAGAGCACAGGGAGAATCTGAGGACACAGAGGACAAAGCAGGGGACCTTGTGTCCTCCACGTGGTTGCACATAGAGTAGAAGAGCTGGGTGAGTAACTCTCTGGAATCACCTTTCTGCTGATGATCGTGTCTCTACAGATGGGCTCAAGGACTGCTTGCCTGAGTGCAGCCGTGAGGATGAAGCCTCTTCAGGTAGAGAAGG-ACTCCAGGTGGGGCCTGTGCAGC-GGTTC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3596268 790 - 180051392 -----------ggtggtcaggagttcaagaccagcttggccaacatggtgaaaccccatctctactaaaaacacaaaaattagccgggtgtgttggtgcacacctgtagtcctagttacttgggaggctgaggcaggagaactgcttgaacctgggaggcggaggttgcagtgagctgagatcacaccaatgcactccagcctgggtgacagaccaagactctgtctcaaaaataaaataaaaTagtaaaatttaaaattcaggacctcctcaccagagccatactttgagtacacagtagccatatgtCTATACCGCAGAAAACATTGCCATCCTCCCAGAACCTTCTCTCATGCAGCTTCTGTGAGCCTGACATCGATTCTGTTCACTGAACTCATCTAACTCAAGGCACATGCATCAGAGCTGGAATTTCGGGGTTATCGGACTGCGGGTGAGAGCCGTAATGGTCCAGTGGAAGTGTAAAGTTGGAAAGGAATGTCTTCAGCTCCTCCCTCTCACCTGAAGGCTCTCAACTGTGAAGCGTGCCTTGTTGACAGCCTCTGAATCCACAGAGCACAGGGAGAATCTGAGGACACAGAGGACAGAGCAGGGGACCTTGTGTCCTCCACGTGGTTGCACACAGAGCAGAAGAGCTGGGTGAGTAACTTTCTGGAATCACCTTTCTGCTGATGTTTGTGTCTCTACAGATGGGCTCAAGAACAAACTGCCTGAGTGCAGCCATGAGGATGAAGCCTCTTCAGGTAGAGAAGGCACTCCAGGTGCGGCCCGTGCAGAGGGTTC i rheMac8.chr6 C 0 I 7 s macFas5.chr6 3783270 790 - 181584905 -----------ggtggtcaggagttcaagaccagcgtggccaacatggtgaaaccccatctctactaaaaacacaaaaattagccgggtgtgttggtgcacacctgtagtcctagttacttgggaggctgaggcaggagaactgcttgaacctgggaggcggaggttgcagtgagctgagatcacaccaatgcactccagcctgggtgacagaccaagactctgtctcaaaaataaaataaaaTagtaaaatttaaaattcaggacctcctcaccagagccatactttgagtacacagtagccatatgtctataccgcagaaaacattgccatcctcccagaaccttctCTCATGCAGCTTCTGTGAGCCTGACATTGATTCTGTTCACTGAACTCATCTAACTCAAGGCACATGCATCAGAGCTGGAATTTCGGGGTTATCGGACTGCGGGTGAGAGCCGTGATGGTCCAGTGGAAGTGTAAAGTTGGAAGGGAATGTCTTCAGCTCCTCCCTCTCACCTGAAGGCTCTCAACTGTGAAGCGTGCCTTGTTGACAGCCTCTGAATCCACAGAGCACAGGGAGAATCTGAGGACACAGAGGACAGAGCAGGGGACCTTGTGTCCTCCACGTGGTTGCACACAGAGCAGAAGAGCTGGGTGAGTAACTTTCTGGAATCACCTTTCTGCTGATGTTTGTGTCTCTACAGATGGCCTCAAGAACAAACTGCCTGAGTGCAGCCATGAGGATGAAGCCTCTTCAGGTAGAGAAGGCACTCCAGGTGGGGCCCATGCAGAGGGTTC i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3804408 790 + 4899514 -----------ggtggtcaggagttcaagaccagcttggccaacgtggtgaaaccccatctctactaaaaacacaaaaattagccggctgtgttggtgcacacctgtagtcctagttacttgggaggctgaggcaggagaactgcttgaacctgggaggcggaggttgcagtgagctgagatcacaccaatgcactccagcctgggtgacagaccaagactctgtctcaaaaataaaataaaaTagtaaaatttaaaattcaggacctcctcaccagagccatactttgagtacacagtagccatatgtCTATACCGCAGAAAACATTGCCATCCTCCCAGAACCTTCTCTCATGCAGCTTCTGTGAGCCTGACATCGATTCTGTTCACTGAACTCATCTAACTCAAGGCACATGCATCAAAGCTGGAATTTCGGGGTTATCGGACTGCGGGTGAGAGCCGTAATGGTCCAGTGGAAGTGTAAAGTTGGAAGGGAATGTCTTCAGCTCCTCCCTCTCACCTGAAGGCTCTCAACTGTGAAGCGTGCCTTGTTGACAGCCTCTGAATCCACAGAGCACAGGGAGAATCTGAGGACACAGAGGACAGAGCAGGGGACCTTGTGTCCTCCACGTGGTTGCACACAGAGCAGAAGAGCTGGGTGAGTAACTTTCTGGAATCACCTTTCTGCTGATGTTTGTGTCTCTACAGATGGCCTCAAGAACAAACTGCCTGAGTGCAGCCATGAGGATGAAGCCTCTTCAGATAGAGAAGGCACTCCAGGTGCGGCCCATGCAGAGGGTTC i macNem1.NW_012020287v1 C 0 I 7 s cerAty1.NW_012001120v1 3528583 790 - 3647740 -----------ggtggtcaggagttcaagaccagcttggccaacatggtgaaaccccatctctactaaaaacacaaaaattagccgggtgtgttggtgcacacctgtagtcctagttacttgggaggctgaggcaggagaactgcttgaacctgggaggcggaggttgcagtgagctgagatcacaccaatgcactccagcctgggtgacagagcaagactctgtctcaaaaataaaataaaaTAGTAAAATCTAAAATTCAGGACCTCCTCACCAGAGCCATACTTTGAGTACACAGTAGCCATATGTCTGTACCGCAGAAAACGTTTCCATCCTCCCAGAACCTTCTCTCATGCAGTTTCTGTGAGCCTGACATCGATTCTGTTCACTGAACTCATCTAGCTCAAGGCACATGCATCAAAGCTGGAATTTCAGGGTTATCGGACTGTGGGTGAGAGCCGTAATGGTCCAGTGGAAGTGTAAAGTTGGAAGGGAATGTCTTCAGCTCCTCCCTCTCACCCGAAGGCTCTCAACTGTGAAGCGTGCCTTGTTGACAGCCTCTGAATCCACAGAGCACAGGGAGAATCTGAGGACACAGAGGACAGAGCAGGGGACCTTGTGTCCTCCACGTGGTTGCACACAGAGTAGAAGAACTGGGTGAGTGACTTTCTGGAATCACCTTTCTGCTGATGTTTGTGTCTCTACAGATGGGCTCAAGAACAGCCTGCCTGAGTGCAGCCATGAGGATGAAGCCTCTTCAGGTAGAGAAGGCACTCCAGGTGGGGCCCGTGCAGAGGGTTC i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79663288 790 + 82825804 -----------ggtggtgaggagttcaaaaccagcttggccaacatggtgaaaccccatctctactaaaaacacaaaaattagccgggtgtgttggtgcacacctgtagtcccagctacttgggaggctgaggcaggagaactgcttgaacctgggaggcggaggttgcagtgagctgagatcacaccaatgcactccagcctgagtgacagagcaagactctgtctcaaaaataaaataaaatagtaaaaTTTAAAATTCGGGACCTCCTCACCAGAGCCATACTTTGAGTACACAGTAGCCATATGTCTATGCCGCCAAAAACATTTCCATCCTCCCAGAACCTTCTCTCATGCAGCTTCTGTGAGCCTGACATCGATTCTGTTCACTGAACTCATCTAACTCAAGGCACAGGCATCAAAGCTGGAATTTCAGGGTTATCAGACTGCGGGTGAGAGCCGTAATGGTCCAGTGGAAGTGTAAAGTTGGAAGGGAATGTCTTCAGCTCCTCCCTCTCACCTGAAGGCTCTCAACTGTGAAGCGTGCCTTGTTGACAGCCTCTGAATCCACAGAGCACAGGGAGAATCTGAGGACACAGAGGACAGAGCAGGGGACCTTGTGTCCTCCACATGGTTGCACACAGAGTAGAAGAGCTGGTTGAGTAACTTTCTGGAATCACCTTTCTGCTGAGGTTTGTGTCTCTACAGATGGGCTCAAGAACAGCCTGCCTGAGTGCAGCCATGAGGATGAAGCCTCTTCAGGTAGAGAAGGCACTCCAGGTGGGGCCCGTGCAGAGGGTTC i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1623008 790 - 1768974 -----------ggtggtcaggagttcaagaccagcttggccaacatggtgaaaccccatctctactaaaaacacaaaaattagccgggtgtgttggtgcacacctgtagtcctagttacttgggaggctgaggcaggagaactgcttgaacctgggaggcggaggttgcagtgagctgagatcacaccaatgcactccagcctgggtgacagagcaagactctgtctcaaaaataaaataaaaTagtaaaatttaaaattcaggacctcctcaccagagccatactttgagtacacagtagccatatgtCTATACCGCAGAAAACATTTCCATCCTCCCAGAACCTTCTGTCATGCAGCTTCTGTGAGCCTGACATCGATTCTGTTCACTGAACTCATCTAGCTCAAGGCACATGCATCAAAGCTGGAATTTCAGGGTTATCGGACTGCGGGTGAGAGCCGTAATGGTCCAGTGGAAGTGTAAAGTTGGAAGGGAATGGCTTCAGCTCCTCCCTCTCACCTGAAGGCTCTCAACTGTGAAGTGTGCCTTGTTGACAGCCTCTGAATCCACAGAGCACAGGGAGAATCTGAGGACACAGAGGACAGAGCAGGGGACCTTGTGTCCTCCACGTGGTTGCACACAGAGTAGAAGAGCTGGGTGAGTAACTTTCTGGAATCACCTTTCTGCTGATGTTTGTGTCTCTACAGATGGGCTCAAGAACAGCCTGCCTGAGTGCAGCCATGAGGATGAAGCCTCTTCAGCTAGAGAAGGCACTCCAGGTGGGGCCCGTGCAGAGGGTTC i manLeu1.NW_012103876v1 C 0 C 0 e colAng1.NW_012117422v1 110716 945 - 815015 M a score=7504.000000 s hg38.chr5_KI270795v1_alt 96862 9 + 131892 TTACGGGCG s panTro5.chr5 3420601 9 - 181907262 TTACGGGGG i panTro5.chr5 C 0 C 0 s panPan2.chrUn_NW_014024182v1 2756 9 - 22698 TTACGGGGG i panPan2.chrUn_NW_014024182v1 C 0 C 0 s gorGor5.CYUI01000356v1 75696 9 + 152767 TTACGGGCG i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160315525 9 - 163208435 TGATGGGGG i nomLeu3.chr2 C 0 C 0 s macFas5.chr6 3784060 7 - 181584905 -TGTGGGT- i macFas5.chr6 C 0 C 0 s cerAty1.NW_012001120v1 3529373 8 - 3647740 TTGTGGGT- i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79664078 8 + 82825804 TTGTGGGT- i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1623798 8 - 1768974 TTGTGGGT- i manLeu1.NW_012103876v1 C 0 C 0 e macNem1.NW_012020287v1 3805198 7 + 4899514 I e rheMac8.chr6 3597058 7 - 180051392 I e colAng1.NW_012117422v1 110716 945 - 815015 M a score=362246.000000 s hg38.chr5_KI270795v1_alt 96871 99 + 131892 CAGTAGGATTGGGGCTATAAAATCAGTAAATGGAAAAGGAGC------CAGGTGCAGAAGTCTGATttattcctttt---tttttt----ctttttctttttggagacaggg s panTro5.chr5 3420610 102 - 181907262 CAGTAGGATTGGGGCTCTAAAATCAGTAAATGGAAAAGGAGC------TAGGTGCAGAAGTCTGATTTATTCCtttt---tttttt-tttctttttctttttggagacaggg i panTro5.chr5 C 0 C 0 s panPan2.chrUn_NW_014024182v1 2765 102 - 22698 CAGTAGGATTGGGGCTCTAAAATCAGTAAATGGAAAAGGAGC------TAGGTGCAGAAGTCTGATTTATTCCtttt---tttttt-tttctttttctttttggagacaggg i panPan2.chrUn_NW_014024182v1 C 0 C 0 s gorGor5.CYUI01000356v1 75705 103 + 152767 CAGTAGGATTGGGGCTATAAAATCAGTAAATGGAAAAGGAGC------CAGGTGCAGAAGTCTGATTTATTCCtttt---ttttttctttctttttcttcttggagataggg i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160315534 97 - 163208435 CAGTAGGATGGGGGCTATAAAATCAGTAAATGGAAACGGAGCTAGGTGCAGGTGCAGAAGTCTGAtttattcctttt---tttttt------------ggggggggacaggg i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3597065 95 - 180051392 CAGTAGGATGGAGACTATGAAATCAGTAAATGGAAAAGGAAATAGGTGTACGTGCAGAAGTCTGAtttattcctttt---attttt--------------ctggagacagga i rheMac8.chr6 I 7 C 0 s macFas5.chr6 3784067 95 - 181584905 CAGTAGGATGGAGACTATGAAATCAGTAAATGGAAAAGGAAATAGGTGTACGTGCAGAAGTCTGAtttattcctttt---attttt--------------ctggagacagga i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3805205 95 + 4899514 CAGTAGGATGGAGACTATGAAATCAGTAAATGGAAAAGGAAATAGGTGTACGTGCAGAAGTCTGAtttattcctttt---attttt--------------ctggagacagga i macNem1.NW_012020287v1 I 7 C 0 s cerAty1.NW_012001120v1 3529381 95 - 3647740 CAGTAGGATGGAGACTATGAAATCAGTAAATGGAAAAGGAAATAGGTGTAGGTGCAGAAGTCTGAtttattcctttt---attttt--------------ctggagacagga i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79664086 98 + 82825804 CAGTAGGATGGAGACTATGAAATCAGTAAATGGAAAAGGAAATAGGTGTAGGTGCAGAAGTCTGAtttattccttttttgtttttt--------------ttggagacagga i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1623806 93 - 1768974 CAGTAGGATGGAGACTATGAAATCAGTAAATGGAAAAGGAAATAGGTGTACGTGCAGAAGTCTGAtttattcctt-----tttttt--------------ttggagatagga i manLeu1.NW_012103876v1 C 0 C 0 e colAng1.NW_012117422v1 110716 945 - 815015 M a score=2095039.000000 s hg38.chr5_KI270795v1_alt 96970 370 + 131892 tcttactctgtcacccaggctagagtgcagtcagtg-tgccactgtggctcaacctccgtctcct-gggctcaatcaatcgttccacctcagcctccagaaagtagctgagaatacaggtgcatgccaccatgcttggctaagttttgtactttttgtagagacagggtttcgccatgttgcccaggctagtcttgaaatcctggactc--gagatctgttcacctcggcctcccaaagtgctgggattataggcaagagccaccgagcccggccTCCTTTTGTATTTTAATTAAGACAGAGTCCTAAGAGGTTGTGTTTGCATGGATGTTGTGTGTGCTCTGCTTGTCATATTCATTTCTTGCTCTGGTGTTT s panTro5.chr5 3420712 371 - 181907262 tcttactctgtcacccaggctagagtgcagtcagtggtgctattgtggctcaacctccgtctcct-gggctcaatcaatccttccacctcagcctccagaaagtagctgagaatacaggtgcatgccaccatgcttggct--gttttgtactttttgtagagacagggtttcgccatgttgcccaggctagtcttgaaatcctggactcaagagatctgttcacctcggcctcccaaagtgctgggattataggcaagagccaccgagcctggccTCCTTTCGTATTTTAATTAAGACAAAGTCCTAAGAGGTTGTGTTTGCATGGATGTTGTGTGTGCTCTGCTTGTCATATTCATTTCTTGCTCTGGTGTTT i panTro5.chr5 C 0 C 0 s panPan2.chrUn_NW_014024182v1 2867 371 - 22698 tcttactctgtcacccaggctagagggcagtcagtggtgctattgtggctcaacctccgtgtgct-gggctcaatcaatccttccacctcagcctccagaaagtagctgagaatacaggtgcatgccaccatgcttggct--gttttgtactttttgtagagacagggtttcgccatgttgcccaggctagtcttgaaatcctggactcaagagatctgttcacctcggcctcccaaagtgctgggattataggcaagagccaccgagcctggccTCCTTTCGTATTTTAATTAAGACAAAGTCCTAAGAGGTTGTGTTTGCATGGATGTTGTGTGTGCTCTGCTTGTCATATTCATTTCTTGCTCTGGTGTTT i panPan2.chrUn_NW_014024182v1 C 0 C 0 s gorGor5.CYUI01000356v1 75808 371 + 152767 tcttactctgtcacccaggctagagtgcagtcagtg-tgccactgtggctcaacctccgtctcct-gggctcagtcaatccttccacctcagcctccagaaagtagctgagaatacaggtgcatgccaccatgcttggctaagttttgtactttttgtagagacagggtttcaccatgttgcccagactagtcttgaaatcctggactcaagagatctgttcacctcagcctcccaaagtgct-ggattataggcaagagccaccgagcccggccTCCTTTTGTATTTTAATTAGGACAAAGTCCTAAGAGGTTGTGTTTGCATGGATGTTGTGTGTGCTCTGCTTGTCTTATTCATTTCTTGCTCTGGTGTTT i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160315631 373 - 163208435 tcttactctgtcacccaggctagagtgcagtcagtggtgccactgtggctcaacctccgtctcct-gggctcaatcaatccttccacctcagcctccagaaagcagctgagaatacaggtgcatgccgccacgcttggctaagttttgtactttttgtagagacagggtttcgccatgttgcccaggctagtcgtgaaatcctggactcaagagatctgttcacctcggcctcccaaagtgctgggattgcaggcaagagccacccagcccggccTCCTTTTGTATTTTAATTAAGACAGAGTCCTAAGAGGTTGTGTTTGCATGGATCTTGTGTGTGCTCTGCTTGTCATATTCATTTCTTGCTCTGCTGTTT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3597160 367 - 180051392 tcttactctgtcacccaggctagagtg----cagtggtgccactgtggctcaacctccatctcct-gggctcaatcaatccttccacctcagcctccag--agtagctgagaaaacaggtgcatgccactacgcctggctaagttttgtactttctgtagagacggggtttcgccatgttgcccaggctagtcttgaaatcctggagtcaagtgatctgttcacctcggcctcccaaagtgctgggattataggcatgagccaccgagcccggccTCCTTTTGTATTTTAATTAAGACCAAGTCCTAAGAGGTTGTGTTTGCACGGACATTGTGTGTGCTCTGCTTGTCATATTCATTTCTTGCTCTGGTGTTT i rheMac8.chr6 C 0 I 320 s macFas5.chr6 3784162 367 - 181584905 tcttactctgtcacccaggctagagtg----cagtggtgccactgtggctcaacctccatctcct-gggctcaatcaatccttccacctcagcctccag--agtagctgagaatacaggtgcatgccactacgcctggctaagttttgtactttctgtagagacggggtttcgccatgttgcccaggctagtcttgaaatcctggagtcaagtgatctgttcacctcggcctcccaaagtgctgggattataggcatgagccaccgagcccggccTCCTTTTGTATTTTAATTAAGACCAAGTCCTAAGAGGTTGTGTTTGCACGGACATTGTGTGTGCTCTGCTTGTCATATTCATTTCTTGCTCTGGTGTTT i macFas5.chr6 C 0 I 320 s macNem1.NW_012020287v1 3805300 367 + 4899514 tcttactctgtcacccaggctagagtg----cagtggtgccactgtggctcaacctccatctcct-gggctcaatcaatccttccacctcagcctccag--agtagctgagaatacaggtgcatgccactacgcctggctaagttttgtactttctgtagagacagggtttcgccatgttgcccaggctagtcttgaaatcctggagtcaagtgatctgttcacctcggcctcccaaagtgctgggattataggcatgagccaccgagcccggccTCCTTTTGTATTTTAATTAAGACCAAGTCCTAAGAGGTTGTGTTTGCACGGACATTGTGTGTGCTCTGCTTGTCATATTCATTTCTTGCTCTGGTGTTT i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012001120v1 3529476 367 - 3647740 tcttactctgtcacccaggctagagta----cagtggtgccactgtggctcaacctccacctcct-gggctcaatcaatccttccacctcagcctccag--agtagctgagaatacaggtgcatgccactacacctggctaagttttgtactttctgtagagacagggtttcgccatgttgcccaggctagtcttgaaatcctggactcaagtgatctgttcacctcggcctcccaaagtgctgggattataggcatgtgccactgagcccggccTCCTTTTGTATTTTAATTAAGACCAAGTCCTAAGAGGTTGTGTTTGCACGGACGTTGTGTGTGCTCTGCTTGTCATATTCATTTCTTGCTCTGGTGTTT i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79664184 367 + 82825804 tcttactctgtcacccaggctagagtg----cagtggtgccactgtagctcaacctccatctcct-gggctcaatcaatccttccacctcagcctccag--agtagctgagaatacaggtgcatgccactacgcctggctaagttttgtactttttgtagagacagggttttgccatgttgcccaggctagtcttgaaatcctggactcaagtgatctgttcacctcggcctcccaaagtgctgggattataggcatgagccactgagcccggccTCCTTTTGTATTTTAATTAAGACCAAGTCCTAAGAGGTTGTGTTTGCACGGACATTGTGTGTGCTCTGCTTGTCATATTCATTTCTTGCTCTGGTGTTT i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1623899 368 - 1768974 tcttactctgtcacccaggctagagtg----cagtggtgccactgtggctcaacctccatctcccggggctcaatcaatccttccacctcagcctccag--agtagctgagaatacaggtgcatgccactacacctggctaagttttgtactttctgtagagacagggttttgccatgttgcccaggctagtcttgaaatcctggactcaagtgatctgttcacctcgacctcccaaagtgctgggattataggcatgagccaccgagcccggccTCCTTTTATATTTTAATTAAGACCAAGTCCTAAGAGGTTGTGTTTGCACGGACATTGTGTGTGCTCTGCTTGTCATATTCAGTTCTTGCTCTGGTGTTT i manLeu1.NW_012103876v1 C 0 C 0 s colAng1.NW_012117422v1 111662 367 - 815015 tcttactctgtcacccaggctagagtg----cagtggtgccactgtggctcaacctccatctcct-gggctcaatcaatccttccacctcagcctccag--agtagctgagaatacaggtgcatgccactacacctggctaagttttgtactttttgtagagacagggttcctccatgttgcccaggctagtcttgaaatcctggactcaagtgatctgttcacctcagcctcccaaaatgctgggattataggcatgagccactgagccaggccTCCTTTTGTATTTTAATTAAGACAAAGTCCTAAGAGGTTGTGTTTGCACAGACGTTGTGTGTGCTCTGCTTGTCATATTCATTTCTTGCTCTGGTGTTT i colAng1.NW_012117422v1 M 945 C 0 a score=1969028.000000 s hg38.chr5_KI270795v1_alt 97340 361 + 131892 AAAGATGACCTTTTGCAGAAAACCAGATCTTTCCTGCCTGTGCCACAGAAAGCACTAAATCCTTGGGTTTTGATGGGATGGCATCCTTTGTGAATGGAGAACACGGGATTAGTATGTGGGTGTGGCGTTTGGTGCTATGCGGGGAGTGATGTGGGACACAGCCCCTCACAGCCCCTAAGTCTCCCTGGAGACAAAGTCTCCCACGTGTGTGCCAGGAGGTGGGAGGAGTCCACCCTCTCCCTCTGCACCCTTGGGACCTGCAGCAGCACCTTCCTGTCCCGTCCTCACCATCGGCTCCGGGTTGAAAGGCACCCACAGGGTTGGATGATGCAGAGAATCCTTCCTCTGGGATGAATATGTA s panTro5.chr5 3421083 361 - 181907262 AAAGATGACCTTTTGCAGAAAACCAGATCTTTCCTGCCTGTGCCACAGAAAGCACGAAATCCTTGGGTTTTGATGGGTTGGCATCGTTTGTGAATGGAGAACACGGGATTAGTATGTGGACGTGGCGTTTGGTGCTATGCGGGGAGTGATGTGGGACACAGCCCCTCACAGCCCCGAAGTCTCCCTGGAGACAAAGTCTTCCACGTGTGTGCCAGGAGGTGGGAGGAGTCCACCCTCTCCCTCTGCACCCCTGGGACCTGCAGCAGCACCTTCCTGTCCCGTCCTCACCATCGGCTCCGGGTTGAAGGGCGCCCACAGGGTTGGATGATGCAGAGAATCCTTCCTCTGGGATGAATATGTA i panTro5.chr5 C 0 C 0 s panPan2.chrUn_NW_014024182v1 3238 361 - 22698 AAAGATGACCTTTTGCAGAAAACCAGATCTTTCCTGGCTGTGCCACAGAAAGCACGAAATCCTTGGGTTTTGATGGGTTGGCATCGTTTGTGAATGGAGAACACGGGATTAGTATGTGGACGTGGCGTTTGGTGCTATGCGGGGAGTGATGTGGGACACAGCCCCTCACAGCCCCGAAGTCTCCCTGGAGACAAAGTCTTCCACGTGTGTGCCAGGAGGTGGGAGGAGTCCACCCTCTCCCTCTGCACCCCTGGGACCTGCAGCAGCACCTTCCTGTCCCGTCCTCACCATCGGCTCCGGGTTGAAGGGCGCCCACAGGGTTGGATGATGCAGAGAATCCTTCCTCTGGGATGAATATGTA i panPan2.chrUn_NW_014024182v1 C 0 C 0 s gorGor5.CYUI01000356v1 76179 361 + 152767 AAAGATGACCTTTTGCAGAAAACCAGATCTTTCCTGCCTGTGCCACAGAAAGCACTAAATCCTTGGGTTTTGATGGGATGGCATCCTTTGTGAATGGAGAACACGGGATTAGTATGTGGGTGTGGCGTTTGGTGCTATGCAGGGAGTGATGTGGGACACAGCCCCTCACAGCCCCTAAGTCTCCCTGGAGACAAAGTCTCCCACGTGTGTGCCAGGAGGTGGGAGGAGTCCACCCTCTCCCTCTGCACCCTTGGGACCTGCAGCAGCACCTTCCTGTCCCGTCCTCACCATCGGCTCCGGGTTGAAAGGCGCCCACAGGGTTGGATGATGCAGAGAATCCTTCCTCTGGGATGAATATGTA i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160316004 361 - 163208435 AAAGATGACCTTTTGCAGAAAACCAGATCTTTCCTGCCTGTGTCACAGAAAACACTAAATCCTTGAGTTTTGATGGGTTGGCATCCTTTGTGAATGGAGAACACGGGATTCGTATGTGGGTGTGGCGTTTGGTGCTATGCGGGGAGTGATGTGGGACACAGCCCCTCACAGCCCCTAAGTCTCCCTGGAGACAAAGTCTTCCACGTGTGTGCCTGGAGGTGGGAGGAGTCCACCCTCTCCCTCTGCACTCTTGGGACCTGCAGCAGTACCTTCCTGTCCCGTCCTCACCATCGGCTCCGGGCTGAAGGGCGCCCACAGGGTTGGATGATGCAGAGAATCCTTCCTCTGGGATGAATATGTA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3597847 341 - 180051392 aaaGATGACCTTTTGCAGAAAACCAGATCTTTCCTGCCTGTGCCACAGAAAACACGAAATCCTTGGGTTTTGATGGGTTGGCCTCCTTTGTGA--------------------ATGTGGCTGTGGCGTTTGGTGCCATGCAGGGAGTGATGTGGGACCCAGCCCCTCACAGCTCCTAAGTCTCCCTGGAGACAAAGTCTTCCAAGTGTGTGTCAGGAGGTGGGAGGAGTCCACCCTCTCCCCGTGTACTCTTGGGACCAGCAGCAGCACCTTCCTGTCCCGTCCTCACCATCGGCTCCAGGTTGAAGGGCGCTCACAGGGTTGGATGATGCAGAGAATCCTTCCTCCGGGATTAATATGTA i rheMac8.chr6 I 320 I 60 s macFas5.chr6 3784849 341 - 181584905 aaaGATGACCTTTTGCAGAAAACCAGATCTTTCCTGCCTGTGCCACAGAAAACACTAAATCCTTGGGTTTTGATGGGTTGGCATCCTTTGTGA--------------------ATGTGGCTGTGGCGTTTGGTGCCATGCAGGGAGTGATGTGGGACCCAGCCCCTCACAGCTCCTAAGTCTCCCTGGAGACAAAGTCTTCCAAGTGTGTGTCAGGAGGTGGGAGGAGTCCACCCTCTCCCCGTGCACTCTTGGGACCAGCAGCAGCACCTTCCTGTCCCGTCCTCACCATCGGCTCCAGGTTGAAGGGCGCTCACAGGGTTGGATGATGCAGAGAATCCTTCCTCCGGGATTAATATGTA i macFas5.chr6 I 320 C 0 s macNem1.NW_012020287v1 3805667 341 + 4899514 TAAGATGACCTTTTGCAGAAAACCAGATCTTTCCTGCCTGTGCCACAGAAAACACTAAATCCTTGGGTTTTGATGGGTTGGCATCCTTTGTGA--------------------ATGTGGGTGTGGCGTTTGGTGCCATGCAGGGAGTGATGTGGGACCCAGCCCCTCACAGCTCCTAAGTCTCCCTGGAGACAAAGTCTTCCAAGTGTGTGTCAGGAGGTGGGAGGAGTCCACCCTCTCCCCGTGCACTCTTGGGACCAGCAGCAGCACCTTCCTGTCCCGTCCTCACCATCGGCTCCAGGTTGAAGGGCGCTCACAGGGTTGGATGATGCAGAGAATCCTTCCTCTGGGATTAATATGTA i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012001120v1 3529843 341 - 3647740 TAAGATGACCTTTTGCAGAAAACCAGACCTTTCCTGCCTGTGCCACAGAAAACACTAAATCCTTGGGTTTTGATGGGTTGGCATCCTTTGTGA--------------------ATGTGGGTGTGGCGTTTGGTGCCATGCAGGGAGTGATGTGGGACCCAGCCCCTCACAGCCCCTAAGTCTCCCTGGAGACAAAGTCTTCCACGTGTGTGTCAGGAGGTGGGAGGAGTCCACCCTCTCCCTCTGCACTCTTGGGACCAGCAGCAGCACCTTCCTGTCCCGTCCTCACCATCGGCTCCAGGTTGAAGGGCGCTCACAGGGTTGGATGATGCAGAGAATCCTTCCTCTGGGATTAATATGTA i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79664551 339 + 82825804 TAAGATGACCTTTTGCAGAAAACCAGATCTTTCCTGCCTGTGCCACAGAAAACACTAAATCCTTGGGTTCTGATGGGTTGGCATCCTTTGTGA--------------------ATGTGGGTGTGGCGTTTGGTGCCGTGCAGGGAGTGATGTGGGACACAGCCCCTCACAGCCCCTGAGTCTCCCTGGAGACAAAGTCTTCC--GTGTGTGTCAGGAGGTGGGAGGAGTCCACCCTCTCCCTCTGCACTCTTGGGACCAGTAGCAGCACCTTCCTGTCCCGTCCTCACCATCGGCTCCAGGTTGAAGGGCGCTCACAGGGTTGGATGATGCAGAGAATCCTTCCTCTGGGATTCATATGTA i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1624267 336 - 1768974 TAAGATGACCTTTTGCAGCAAACCAGACCTTTCCTGCCTGTGCCACAGAAAACACTAAATCCTTGGGTTTTGATGGGTTGGCATCCTTTGTGA--------------------ATGTGGGTGTGGTGTTTGGTGCCATGCAGGGAGTGATGTGGGACACAGCCCCTCACAGCCCCTAAGTCTCCCTGGAGACAAAGTCT-----GTGTGTGTCAGGAGGTGGGAGGAGTCCACCCTCTCCCTCTGCACTCTTGGGACCAGCAGCAGCACCTTCCTGTCCCGTCCTCACCATCGGCTCCAGGTTGAAGGGCGCTCACAGGGTTGGATGATGCAGAGAATCCTTCCTCTGGGATTAATATGTA i manLeu1.NW_012103876v1 C 0 C 0 s colAng1.NW_012117422v1 112029 360 - 815015 TAAGATGACCTTTTGCAGAAAACCAGATCTTTCCTGCC-GTGCCACAGAAAACACTAAATCCTTGGGTTTTGATGGGTTGGCATCCTTTGTGAATGGAGAACACGCAATTAGTATGTGGGTGTGGTGTTTGGTGCCATGCAGGGGGTGATGTGGGATACAGCCCCTCACAGCCCCTAAGTCTCCCCGGAGACAAAGTCTTCCATGTGTGTGTCAGGAGGTGGGAGGAGTCCACCCTCTCCCTCTGCACTCTTGGGACCAGCAGCAGCACCTTCCTGTCCCGTCCTCACCATCGGCTCCAGGTTGAGGGGCGCTCACAGGGTTGGATGATGCAGAGAATCTTTCCTTTGGGATTAATAGGTA i colAng1.NW_012117422v1 C 0 C 0 a score=9710.000000 s hg38.chr5_KI270795v1_alt 97701 5 + 131892 TGCCC s panTro5.chr5 3421444 5 - 181907262 TGCCC i panTro5.chr5 C 0 C 0 s panPan2.chrUn_NW_014024182v1 3599 5 - 22698 TGCCC i panPan2.chrUn_NW_014024182v1 C 0 C 0 s gorGor5.CYUI01000356v1 76540 5 + 152767 TGCCC i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160316365 5 - 163208435 TGCCC i nomLeu3.chr2 C 0 C 0 s macFas5.chr6 3785190 2 - 181584905 ---CC i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3806008 2 + 4899514 ---CC i macNem1.NW_012020287v1 C 0 I 57 s cerAty1.NW_012001120v1 3530184 3 - 3647740 --CCC i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79664890 2 + 82825804 ---CC i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1624603 2 - 1768974 ---CC i manLeu1.NW_012103876v1 C 0 C 0 s colAng1.NW_012117422v1 112389 2 - 815015 ---CC i colAng1.NW_012117422v1 C 0 C 0 e rheMac8.chr6 3598188 60 - 180051392 I a score=79747.000000 s hg38.chr5_KI270795v1_alt 97706 84 + 131892 C------------------------------------GGCTGTGGAGGCACGA-GGGGAAGCCCACGCTTCAC-----------CCGCCGTGGGGTCGCGAGGGG--------------------------------------AAGCCCACGCTTCAGCATGTTTCTGGC s panTro5.chr5 3421449 121 - 181907262 C------------------------------------CGCCGTGGGGGCGCGA-GGGGAAACCCACGCTTCAC-----------CCGCCGTGGGGGCGCGAGGGGGAAACCCACGCTTCACCCGCCGTGGGGGCGCGA-GGGGAAACCCACGCTTCAGCACATTTCTGGC i panTro5.chr5 C 0 C 0 s panPan2.chrUn_NW_014024182v1 3604 123 - 22698 C------------------------------------CGCCGTGGGGGCGTGAGGGGGAAACCCACGCTTCAC-----------CCGCCGTGGGGGCGCGAGGGGGAAACCCACGCTTCACCCGCCGTGGGGGCACGAGGGGGAAACCCACGCTTCAGCACATTTCTGGC i panPan2.chrUn_NW_014024182v1 C 0 C 0 s gorGor5.CYUI01000356v1 76545 119 + 152767 C-------------------------------------GCTGTGGAGGCGCGA-GGGGAAGCCCACGCTTCAC-----------CCGCCGTGGGGTCGCGAGGGG-AAGCCCACGCTTCACCCGCCGTGGGGTCGCGA-GGGGAAGCCCACGCTTCAGCATGTTTCTGGC i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160316370 156 - 163208435 CCGCCATAGAGACACGAAGGGAAACCCACGCTTCACCCGCCATGGAGGCGCGA-GGGGAAACCCACGCTTCACCCGCCATGGAGGCGCGAGGGGAAACCCA------------CGCTTCACCCGCCATGGAGGCGCGA-GGGGAAACCCACGCTTCAGCACGTTTCTGGC i nomLeu3.chr2 C 0 C 0 s macFas5.chr6 3785192 54 - 181584905 -------------------------------------------------------------------------------------------------------------------CGCCCCCCGCCATAGAAACACGA-GCGGAAACCCATGCCTGAGCACATTGCTGGC i macFas5.chr6 C 0 I 3 s cerAty1.NW_012001120v1 3530187 51 - 3647740 ----------------------------------------------------------------------------------------------------------------------CTCCCACCATAGAGACACGA-GGGGAAACCCATGCCTGAGCACATTCCTGGC i cerAty1.NW_012001120v1 C 0 I 3 s chlSab2.chr23 79664892 54 + 82825804 -------------------------------------------------------------------------------------------------------------------CGCCCCCCACCATAGAGACACGA-GGGGAAGCCCATGCCTGAGCACATTCCTGGC i chlSab2.chr23 C 0 I 3 s manLeu1.NW_012103876v1 1624605 54 - 1768974 -------------------------------------------------------------------------------------------------------------------CGCCCCCCACCATAGAGACACGA-GGGGAAACCCATGCCTGAGCACATTCCTGGC i manLeu1.NW_012103876v1 C 0 I 3 s colAng1.NW_012117422v1 112391 53 - 815015 -------------------------------------------------------------------------------------------------------------------CG-CCCCCACCATAGAGACACGA-GGGGAAACCCATGCCTGAGCACATTTCTGGC i colAng1.NW_012117422v1 C 0 C 0 e macNem1.NW_012020287v1 3806010 57 + 4899514 I e rheMac8.chr6 3598188 60 - 180051392 I a score=5500.000000 s hg38.chr5_KI270795v1_alt 97790 1 + 131892 C s panTro5.chr5 3421570 1 - 181907262 C i panTro5.chr5 C 0 C 0 s panPan2.chrUn_NW_014024182v1 3727 1 - 22698 C i panPan2.chrUn_NW_014024182v1 C 0 C 0 s gorGor5.CYUI01000356v1 76664 1 + 152767 C i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160316526 1 - 163208435 C i nomLeu3.chr2 C 0 C 0 s macFas5.chr6 3785249 1 - 181584905 C i macFas5.chr6 I 3 C 0 s macNem1.NW_012020287v1 3806067 1 + 4899514 C i macNem1.NW_012020287v1 I 57 C 0 s cerAty1.NW_012001120v1 3530241 1 - 3647740 C i cerAty1.NW_012001120v1 I 3 C 0 s chlSab2.chr23 79664949 1 + 82825804 C i chlSab2.chr23 I 3 C 0 s manLeu1.NW_012103876v1 1624662 1 - 1768974 C i manLeu1.NW_012103876v1 I 3 C 0 s colAng1.NW_012117422v1 112444 1 - 815015 C i colAng1.NW_012117422v1 C 0 I 3 e rheMac8.chr6 3598188 60 - 180051392 I a score=2264506.000000 s hg38.chr5_KI270795v1_alt 97791 402 + 131892 ACTCCTCACCCAATCCCAAATCCTTGGGTTAGGAATGAAGCCTTAATTGGGTTTCATTTGAGAAGTCAGTGTCCAGCTGTCACCGAGGCCCTCCGTGGCTGGCAGGAATCCTAGGGGACATGCGTGGAGGGGCTGCTGTGTTGCTGCAGGCACTGGCTCTCACCCTCCCCGTGACCTGGCTCCAGGAATCCACCACGCCCAGGACGGGGCCACTGGGCAGCCGGCACAGGGCTCAATTTTTTGTCACGCCCTTTGCTCTGGCCTGGCAGCCTTGTCCTGTTCCCC-ACGCTGCCATCAGGCCCAGCGTGTTCCCTGGGTCAGGCCGGCCAGGTGCCCTTCCGCCCAGTCCTCCCACAGCTCAGGCAAACCCTGGCAGGGCCCCTTCGTTCATATGCTAACAA--C s panTro5.chr5 3421571 403 - 181907262 ACTCCTCACCCAATCCCAAATCCTTGGGTTAGGAATGAAGCCTGAATTGGGTTTCGTTTGAGACGTCAGTGTCCAGCTGTCACCGAGGCCCTCCGTGGCTGGCAGGAATCCTAGGGGACATGCGTGGAGGGGCTGCTGTGTGGCTGCAGGCACTGGCTCTCACCCTCCCCGTGACCTGGCTCCGGGAATCCACCACGCCCAGGACGGGGCCACTGGGCACCCGGCACAGGGCTCAATTTTTTGTCACGCTCTTTGCTCTGGCCCAGCAGCCTTGTCCTGTTCCCCCACGCTGCCATCAGGCCCAGCGTGTTCCCTGGGTCAGGCCGGCCAGGTGCCCTTCTGCCCAGTCCTCCCACAGCTCAGGCAAACCCTGGCAGGGCCCCTTCGTTCATGTGCTAACAA--C i panTro5.chr5 C 0 C 0 s panPan2.chrUn_NW_014024182v1 3728 402 - 22698 ACTCCTCACCCAATCCCAAATCCTTGGGTTAGGAATGAAGCCTGAATTGGGTTTCGTTTGAGACGTCAGTGTCCAGCTGTCACCGAGGCCCTCCGTGGCTGGCAGGAATCCTAGGGGACATGCGTGGAGGGGCTGCTGTGTGGCTGCAGGCACTGGCTCTCACCCTCCCCGTGACCTGGCTCCGGGAATCCACCACGCCCAGGACGGGGCCACTGGGCAGCCGGCACAGGGCTCAA-TTTTTGTCACGCTCTTTGCTCTGGCCCAGCAGCCTTGTCCTGTTCCCCCACGCTGCCATCAGGCCCAGCGTGTTCCCTGGGTCAGGCCGGCCAGGTGCCCTTCTGCCCAGTCCTCCCACAGCTCAGGCAAACCCTGGCAGGGCCCCTTCGTTCATGTGCTAACAA--C i panPan2.chrUn_NW_014024182v1 C 0 C 0 s gorGor5.CYUI01000356v1 76665 402 + 152767 ACTCCTCACCCAATCCCAAATCCTTGGGTTAGGAATGAAGCCTTAATTGGGTTTCGTTTGAGAAGTCAGTGTCCAGCTGTCACCGAGGCCCTCCGTGGCTGGCAGGAATCCTAGGGGACATGCGTGGAGGGGCTGCTGTGTTGCTGCAGGCACTGGCTCTCACCCTCCCCGTGACCTGGCTCCAGGAATCCACCACGCCCAGGACGGGGCCACTGGGCAGCCGGCACAGGGCTCAATTTTTTGTCACGCCCTTTGCTCTGGCCCGGCAGCCTTGTCCTGTTCCCC-ACGCTGCCATCAGGCCCAGCGTGTTCCCTGGGTCAGGCCGGCCAGGTGCCCTTCCGCCCAGTCCTCCCACAGCTCAGGCAAACCCTGGCAGGGCCCCTTCGTTCATATGCTAACAA--C i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160316527 402 - 163208435 ACTCCTCACCCAATCCCAAATCCTTGAGTTAGGAATGAAGCCTGAATTGGGTTTCGTTTGAGAAGTCAGTGTCCAGCTGTCACCGAGGCCCTCCGTGGCTGGCAGGAATCCTAGGGGACATGCGTAGAGGGGCTGCTGTGTTGCTGCAGGCACTGGCTCTCACCCTCCCCGTGACCTGGCTCCAGGAATCCACCACGCCCAGGACAGGGCCACTGGGCAGCCGGCACAGGGCTCACTTTTTTGTCACGTCCTTTGCTCTGGCCCAGCAGCCTTGTCCTGTTCCCC-ACGCTGCCATCAGGCCCAGCGTGTTCCCTGTGTCAGGCCGGCCAGGTGCCCTTCCGCGCAGTCCTCCCACAGCTCACGCAAACCCTGGCAGGACCCCTTCATTCATATGCTAACAA--C i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3598248 400 - 180051392 ACTCCTCACCCAATACCAAATCCCTGGGTTAGGAATGAAGCCTGAATTGGGTTTCGTTTGAGAAGTCAGTGTCCAGCTGTCACCAAGGCCCTCCATGGCCAGCAGGAATCCTAGGGGACATGCGTGGAGGGGCTGCTGTGTCGCTGCAGGCACTGGCTCTCACCCTCCCCATGACCTGGCTCCGGGAATCCACCACACGCAGGACAGGCCCACTGGGCAGTTGGCACAGGGGTCACTTTTTTGTCAAGCCCTTTGCTCTGGCCCGACAGCCTTGTTCTGTTCCCC-GCGATGCCATCAGG-CCAGCTTGTTCCCTGTGTCAGGCTGGCCAGGTGCCCTCCCGCCCAGTCCTCCCACAGCTCAGGCAAACCCTGGCAGGACCCCTTCATTCATGTGCTAACAA--- i rheMac8.chr6 I 60 C 0 s macFas5.chr6 3785250 400 - 181584905 ACTCCTCACCCAATACCAAATCCCTGGGTTAGGAATGAAGCCTGAATTGGGTTTCGTTTGAGAAGTCAGTGTCCAGCTGTCACCAAGGCCCTCCATGGCCAGCAGGAATCCTAGGGGACATGCGTGGAGGGGCTGCTGTGTCGCTGCAGGCACTGGCTCTCACCCTCCCCATGACCTGGCTCCGGGAATCCACCACACGCAGGACAGGCCCACTGGGCAGTTGGCACAGGGGTCACTTTTTTGTCAAGCCCTTTGCTCTGGCCCGACAGCCTTGTTCTGTTCCCC-GCGATGCCATCAGG-CCAGCTTGTTCCCTGTGTCAGGCTGGCCAGGTGCCCTCCCGCCCAGTCCTCCCACAGCTCAGGCAAACCCTGGCAGGACCCCTTCATTCATGTGCTAACAA--- i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3806068 401 + 4899514 ACTCCTCACCCAATACCAAATCCCTGGGTTAGGAATGAAGCCTGAATTGGGTTTCGTTTGAGAAGTCAGTGTCCAGCTGTCACCAAGGCCCTCCATGGCCAGCAGGAATCCTAGGGGACATGCGTGGAGGGGCTGCTGTGTCGCTGCAGGCACTGGCTCTCACCCTCCCCATGACCTGGCTCCGGGAATCCACCACACGCAGGACAGGCCCACTGGGCAGTTGGCACAGGGGTCACTTTTTTGTCAAGCCCTTTGCTCTGGCCCGACAGCCTTGTTCTGTTCCCC-GCGATGCCATCAGG-CCAGCTTGTTCCCTGTGTCAGGCTGGCCAGGTGCCCTCCCGCTCAGTCCTCCCACAGCTCAGGCAAACCCTGGCAGGACCCCTTCATTCATGTGCTAACAAC-- i macNem1.NW_012020287v1 C 0 I 2071 s cerAty1.NW_012001120v1 3530242 400 - 3647740 ACGCCTCACCCAATACCAAATCCCTGGGTTAGGAATGAAGCCTGAATTGGGTTTCATTTGAGAAGTCAGTGTCCAGCTGTCACCAAGGCCCTCCATGGCCAGCAGGAATCCTAGGGGACATGCGTGGAGGGGCTGCTGTGTCGCTGCAGGCACTGGCTCTCACCCTCCCCGTGACCTGGCTCCGGGAATCCACCACACGCAGGACAGGCCCACTGGGCAGTTGGCACAGGGGTCACTTTTTTGTCACGCCCTTTGCTCTGGCCCGACAGCCTTGTTCTGTTCCCC-GCGATGCCATCAGG-TCAGCTTGTTCCCTGTGTCAGGCTGGCCAGGTGCCCTCCCGCCCAGTCCTCCCACAGCTCAGGCAAACCCTGGCAGGACCCCTTCATTCATGTGCTAACAA--- i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79664950 401 + 82825804 ACTCCTCACCCAATACCAAATCCCTGGGTTAGGAATGAAGCCTGAAGTGGGTTTCGTTTGGGAAGTCAGTGTCCAGCTGTCACCAAGGCCCTCCATGGTCAGCAGGAATCCTAGGGGACGTGTGTGGAGGGGCTGCTGTGTTGCTGCAGGCACTGGCTCTCACCCTCCCCGTGACCTGGCTCCGGGAATCCACCACACGCAGGACAGGGCCACTGGGCAGCTGGCACAGGGGTCACTTTTTTGTCACGCCCTTTGCTCTGGCCCGACAGCCTTGTTCTGTTCCCC-ACGCTGCCATCAGG-CCAGTTTGTTCCCTGTGTCAGGCCGGCCAGGTGCCCTCCCGCCCAGTCCTCCCACAGCTCAGGCAAACCCTGGCAGGACCCCTTCATTCATGTGCTAACAA-C- i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1624663 401 - 1768974 ACGCCTCACCCAATACCAAATCCCTGGGTTAGGAATGAAGCCTGAATTGGGTTTCGTTTGAGAAGTCAGTGTCCAGCTGTCACCAAGGCTCTCCATGGCCAGCAGGAATCCTAGGGGACATGCATGGAGGGGCTGCTGTGTCGCTGCAGGCACTGGCTCTCACCCTCCCGGTGACCTGGCTCCGGGAATCCACCACACGCAGGACAGGGCCACCGGGCAGCTGGCACGGGGGTCACTTTTTTGTCACGCCCTTTGCTCTGGCCCGACAGCCTTGTTCTGTTCCCC-GCGATGCCATCAGG-CCAGCTTGTTCCCTGTGTCAGGCTGGCCAGGTGCCCTCCCGCCCAGTCCTCCCACAGCTCAGGCAAACCCTGGCAGGACCCCTTCATTCATGTGCTAACAA-C- i manLeu1.NW_012103876v1 C 0 T 53215 s colAng1.NW_012117422v1 112448 401 - 815015 ACTCCTCACCCAATACCAAATCCCTGTGTTAGGAATGAAGCCTGAATTGGGTTTCGTTTGAGAAGTCAGAGTCCAGCTGTCACCAAGGCCCTCCATGGCCAGCAGGAATCCTAGGGGACATGCGTGGAGGGGCTGCTGTATTGCTGCAGACACTGGCTCTCACCCTCCCCGTGACCTGGCTCCAGGAATCCACCACACACAGGACAGGGCCACTGGGCAGTTGGCACAGGGGTCACTTTTTTGTCATGCCCTTTGCTCTGGCCCAACAGCCTTGTTCTGTTCCCC-ACGCTGCCATCAGACCCAGCTTGTTCCGTGTGTCAGGCCGGTCAGGTGCCCTCCTGCCCAGTCCTCCCACAGCCCAGGCAAACCCTGGCAGGACCCCTTCATTCATGTGCTAACAA--- i colAng1.NW_012117422v1 I 3 C 0 a score=66303.000000 s hg38.chr5_KI270795v1_alt 98193 20 + 131892 CACGGCTTCACCTGCGGATT s panTro5.chr5 3421974 20 - 181907262 CACGGCCTCACCTGCGGATT i panTro5.chr5 C 0 C 0 s panPan2.chrUn_NW_014024182v1 4130 20 - 22698 CACGGCCTCACCTGCAGATT i panPan2.chrUn_NW_014024182v1 C 0 C 0 s gorGor5.CYUI01000356v1 77067 20 + 152767 CACGGCTTCACCTGCGGATT i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160316929 20 - 163208435 CACGGCCTCACCTGCGGATT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3598648 20 - 180051392 CGCAGTCTCAACTGCGGATT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3785650 20 - 181584905 CGCAGTCTCAACTGCGGATT i macFas5.chr6 C 0 C 0 s cerAty1.NW_012001120v1 3530642 20 - 3647740 TGCAGTCTCAACTGCGGATT i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79665351 19 + 82825804 -TCGGTCTCACCTGCGGATT i chlSab2.chr23 C 0 C 0 s colAng1.NW_012117422v1 112849 20 - 815015 CGCAGTCTCACCTGCGGATT i colAng1.NW_012117422v1 C 0 C 0 e macNem1.NW_012020287v1 3806469 2071 + 4899514 I e manLeu1.NW_012103876v1 1625064 53215 - 1768974 T a score=954589.000000 s hg38.chr5_KI270795v1_alt 98213 210 + 131892 AAGGCAATGGGAAAACGGGCTTTCCCTGGAATCCCGTTCTGTCCTTGCCAATCATTGAGATGC-TAGTGGGATTCTTGTTAGGCTTGAATAGTTTACATTTCCAGGGTCATCCCAGGCTTTGGTCATCATCATCTCTCACAGATCCCAACACAACCCAGGCCTGTGGCCATGTCCCTGACCTAGGGTGGGATCCATGGATTTACTGGAAGG s panTro5.chr5 3421994 210 - 181907262 AAGGCAATGGGAAAAGGGGCTTTCCCTGGAATCCCGTTCTGTCCTTGCCGACCATTGAGATGC-TAGTGGGATTCTTGTGAGGCTTGAATAGTTTACATTTCCAGGGTCATCCCAGGCTTTGGTCATCATCATCTCTCACAGATCCCAACACAACCCAGGCCTGTGGCCATGTCCCTGACCTAGGGTGGGATCCATGGATTTACTGGAAGG i panTro5.chr5 C 0 C 0 s panPan2.chrUn_NW_014024182v1 4150 210 - 22698 AAGGCAATGGGAAAAGGGGCTTTCCCTGGAATCCCGTTCTGTCCTTGCCGACCATTGAGATGC-TAATGGGATTCTTGTGAGGCTTGAATAGTTTACATTTCCAGGGTCATCCCAGGCTTTGGTCATCATCATCTCTCACAGATCCCAACACAACCCAGGCCTGTGGCCATGTCCCTGACCTAGGGTGGGATCCATGGATTTACTGGAAGG i panPan2.chrUn_NW_014024182v1 C 0 C 0 s gorGor5.CYUI01000356v1 77087 210 + 152767 AAGGCAATGGGAAAAGGGGCTTTCCCTGGAATCCCGTTCTGTCCTTGCCAACCATTGAGATGC-TAGTGGGATTCTTGTTAGGCTTGAATAGTTTACATTTCCAGGGTCATCCCAGGCTTTGGTCATCATCATCTCTCACAGATCCCAACACAACCCAGGCCTGTGGCCATGTCCCTGACCTAGGGTGGGATCCATGGATTTACTGGAAGG i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160316949 210 - 163208435 AAGGCAATGGGACAAGGGGCTTTCCCTGGAATCCCATTCTGTCCTTGCCAACCATTGGGATGC-TAGTGGGATTCTTGTGAGGCTTGAATATTTTACATTTCCAGGGTCATCCCAGGCTTTGGTCATTATTATCTCTCACAGATCCCAACACAACCCAGGCCTGTGGCCATGTCCCTGACCTAGGGTGGGATCCATGGATTTACTGGAAGG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3598668 204 - 180051392 AAGGCAATGGGACAAGGGGCTTTCCCTGGAATCCCGCTC-GTCCTTGCCAACCATTGAGATGC-TAGTGGGATTCTTGTGAGGCTTGAATATTTCACATTTCCAAGGTCATCCCAGGCTTTGGTCATTATCATCTCTCACAGATCC-----CAACCCAGGCCTGTGGCCACATCCCCGACCTAGGCTGGGATCCATGGATTTACCGGAGGG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3785670 204 - 181584905 AAGGCAATGGGACAAGGGGCTTTCCCTGGAATCCCGCTC-GTCCTTGCCAACCATTGAGATGC-TAGTGGGATTCTTGTGAGGCTTGAATATTTCACATTTCCAAGGTCATCCCAGGCTTTGGTCATTATCATCTCTCACAGATCC-----CAACCCAGGCCTGTGGCCACATCCCCGACCTAGGCTGGGATCCATGGATTTACCGGAGGG i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3808540 201 + 4899514 AAGGCAATGGGACAA-GGGCTTTCCCT-GAATCCCGCTT-GTCCTTGCCAACCATTGAGATGCTTAGTGGGATTCTTGTGAGGCTTGAATATTTCACATTTCCAAGGTCATCCCACGCTTTGGTCATTATCATCTCTCACAGATCC-----CAACCC-GGCCT-TGGCCACATCCCCGACCTAGGGCTGGATCCATGGATTTACCGGAGGG i macNem1.NW_012020287v1 I 2071 C 0 s cerAty1.NW_012001120v1 3530662 209 - 3647740 AAGGCAATGGGACAAGGGGCTTTCCCTGGAATCCCGCTC-GTCCTTGCCAACCATTGAGATGC-TAGTGGGATTCTTGTGAGGCTTGAATATTTCACATTTCCAAGGTCATCCCAGGCTTTGGTCATTATCATCTCTCACAGATCCCAACACAACCCAGGCCTGTGGCCACATCCCCGACCTAGGCTGGGATCCATGGATTTACGGGAGGG i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79665370 209 + 82825804 AAGGCAATGGGACAAGGGGCTTTCCCTGGAATCCCGCTC-ATCCTTGCCAACCATTGAGATGC-TAGTGGGATTCTTGTGAGGCTTGAATATTTCACATTTCCAAGGTCATCCCAGGCTTTGGTCATTATCATCTCTCACAGATCCCAACACAACCCAGGCCTGTGGCCACATCCCCGACCTAGGCTGGGATCCATGGATTTACCGGAGGG i chlSab2.chr23 C 0 I 435 s colAng1.NW_012117422v1 112869 209 - 815015 AAGGCAATGGGACAAGGGGCTTTCCCCAGAATCCCGCTC-GTCCTTGCCAGCCATTGAGATGC-TAGTGGGATTCTTGTGAGGCTTGAATATTTCACATTTCCAAGGTCATCCCAGGCTTTGGTCATGATCATCTCTCACAGATCCCAACACAACCCAGGCCTGTGGCCACATCCCCGACCTAGGCTGGGATCCATGGATTTACTGGAGGG i colAng1.NW_012117422v1 C 0 C 0 e manLeu1.NW_012103876v1 1625064 53215 - 1768974 T a score=32114.000000 s hg38.chr5_KI270795v1_alt 98423 7 + 131892 ACTGGCA s panTro5.chr5 3422204 7 - 181907262 ACGGGCA i panTro5.chr5 C 0 C 0 s panPan2.chrUn_NW_014024182v1 4360 7 - 22698 ACGGGCA i panPan2.chrUn_NW_014024182v1 C 0 C 0 s gorGor5.CYUI01000356v1 77297 7 + 152767 ACTGGCA i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160317159 7 - 163208435 ACTGGCG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3598872 7 - 180051392 ACTGGCA i rheMac8.chr6 C 0 I 341 s macFas5.chr6 3785874 7 - 181584905 ACTGGCA i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3808741 7 + 4899514 ACTGGCA i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012001120v1 3530871 7 - 3647740 ACTGGCA i cerAty1.NW_012001120v1 C 0 I 344 s chlSab2.chr23 79666014 7 + 82825804 ACTGGCA i chlSab2.chr23 I 435 C 0 s colAng1.NW_012117422v1 113078 7 - 815015 ACTGGCA i colAng1.NW_012117422v1 C 0 C 0 e manLeu1.NW_012103876v1 1625064 53215 - 1768974 T a score=27005.000000 s hg38.chr5_KI270795v1_alt 98430 5 + 131892 GTGCC s panTro5.chr5 3422211 5 - 181907262 GTGCC i panTro5.chr5 C 0 C 0 s panPan2.chrUn_NW_014024182v1 4367 5 - 22698 GTGCC i panPan2.chrUn_NW_014024182v1 C 0 C 0 s gorGor5.CYUI01000356v1 77304 5 + 152767 GTGCC i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160317166 5 - 163208435 GTGCC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3599220 5 - 180051392 GTGCC i rheMac8.chr6 I 341 C 0 s macFas5.chr6 3785881 5 - 181584905 GTGCC i macFas5.chr6 C 0 I 344 s macNem1.NW_012020287v1 3808748 5 + 4899514 GTGCC i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012001120v1 3531222 5 - 3647740 GTGCC i cerAty1.NW_012001120v1 I 344 C 0 s chlSab2.chr23 79666021 5 + 82825804 GTGCC i chlSab2.chr23 C 0 C 0 s colAng1.NW_012117422v1 113085 5 - 815015 GTGCC i colAng1.NW_012117422v1 C 0 C 0 e manLeu1.NW_012103876v1 1625064 53215 - 1768974 T a score=31020.000000 s hg38.chr5_KI270795v1_alt 98435 6 + 131892 CTTCTT s panTro5.chr5 3422216 6 - 181907262 CTTCTT i panTro5.chr5 C 0 C 0 s panPan2.chrUn_NW_014024182v1 4372 6 - 22698 CTTCTT i panPan2.chrUn_NW_014024182v1 C 0 C 0 s gorGor5.CYUI01000356v1 77309 6 + 152767 CTTCTT i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160317171 6 - 163208435 CTTCTT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3599225 6 - 180051392 CTTCTT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3786230 6 - 181584905 CTTCTT i macFas5.chr6 I 344 C 0 s macNem1.NW_012020287v1 3808753 6 + 4899514 CTTCTT i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012001120v1 3531227 6 - 3647740 CTTCTT i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79666026 6 + 82825804 CTTCTT i chlSab2.chr23 C 0 C 0 s colAng1.NW_012117422v1 113090 6 - 815015 CTTCTT i colAng1.NW_012117422v1 C 0 T 65357 e manLeu1.NW_012103876v1 1625064 53215 - 1768974 T a score=4095.000000 s hg38.chr5_KI270795v1_alt 98441 1 + 131892 T s panTro5.chr5 3422222 1 - 181907262 T i panTro5.chr5 C 0 C 0 s panPan2.chrUn_NW_014024182v1 4378 1 - 22698 T i panPan2.chrUn_NW_014024182v1 C 0 C 0 s gorGor5.CYUI01000356v1 77315 1 + 152767 T i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160317177 1 - 163208435 T i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3599231 1 - 180051392 T i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3786236 1 - 181584905 T i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3808759 1 + 4899514 T i macNem1.NW_012020287v1 C 0 I 7688 s cerAty1.NW_012001120v1 3531233 1 - 3647740 T i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79666032 1 + 82825804 T i chlSab2.chr23 C 0 C 0 e colAng1.NW_012117422v1 113096 65357 - 815015 T e manLeu1.NW_012103876v1 1625064 53215 - 1768974 T a score=634772.000000 s hg38.chr5_KI270795v1_alt 98442 216 + 131892 CCAATGTTGTTCTATTGGAGACCAGTAGCACTGGTGGAGGTTGACATGGAGAAAGGAAACGGGCATCAATCAGGAGAACAAAATCAGGCCCTAACAGTTAGAGCAGAGAGGGAAGTCTGTGCCAGGCACAGAGCATCATGGAGACAGTGGCCGCCTCCTGGGGAAAGGGGATGACACGG--GCCTCCCCTCCCTGGGGAATTTGAGGGTTATGGAATT s panTro5.chr5 3422223 216 - 181907262 CCAATGTTGTTCTATTGGAGACCAGTAGCATTGGTGGAGGTTGACAAGGAGAAAGGAAACGGGCATCAATCAGGAGAACAAAATCAGGCCCTAACGGTTAAAGCAGAGAGGGAAGTCCGTGCCAGGCACAGAGCATCATGGAGACAGTGGCCGCCTCCTGGGGAAAGGGGATGACACGG--GCCTCCCCTCCCTGGGGAATTTGAGGGTTATGGAATT i panTro5.chr5 C 0 C 0 s panPan2.chrUn_NW_014024182v1 4379 216 - 22698 CCAATGTTGTTCTATTGGAGACCAGTAGCATTGGTGGAGGTTGACAAGGAGAAAGGAAACGGGCATCAATCAGGAGAACAAAATCAGGCCCTAACGGTTAAAGCAGAGAGGGAAGTCCGTGCCAGGCACAGAGCATCATGGAGACAGTGGCCGCCTCCTGGGGAAAGGGGATGACACGG--GCCTCCCCTCCCTGGGGAATTTGAGGGTTATGGAATT i panPan2.chrUn_NW_014024182v1 C 0 C 0 s gorGor5.CYUI01000356v1 77316 216 + 152767 CCAATGTTGTTCTATTGGAGACCAGTAGCATTGGTGGAGGTTGACAAGGAGAAAGGAAACGGGCATCAATCAGGAGAACAAAATCAGGCCCTAACGGTTAGAGCAGAGAGGGAAGTCCGTGCCAGGCACAGAGCATCATGGAGACAGTGGCCGCCTCCTGGGGAAAGGGGATGACACGG--GCCTCCCCTCCCTGGGGAATTTGAGGGTTATGGAATT i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160317178 214 - 163208435 CCAGTGTTGTTCTATTGGAGACCAGTAGCATTGGTGGAGGTTGACAAGGAGAAAGGAAATGGGCATCAATCAGGAGAACAAAATCAGGCCCTAACGGTTAGAGCAGAGAGGGGAGTCCGTGCCAGGCACAGAGCATCATGGAGACAGTGGCCACCTCCTGGGGAA----TTTGGCACAGACGCCTCCCATGCCTGGGGAATTTCAGGGTTATGGAATT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3599232 209 - 180051392 CCAACATTGTTCTGTTGGAGACCAGTAGCACTGGTGGAGGTTGACAAGGAGAAAGGAAATGGGCATCAATCAGGAGAACAAAATCAGGCTCTGACGGTTAGAGCAGAGAGGGAAGTCCGTGCCAGGCACAGAGCATCATGGAGACAGTGGCCACCTCCTGGGGAAA-GGGATGCCACAG--GCCTCCCCTCCCTGGG------CACAGTTATGGAATT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3786237 209 - 181584905 CCAACATTGTTCTGTTGGAGACCAGTAGCACTGGTGGAGGTTGACAAGGAGAAAGGAAATGGGCATCAATCAGGAGAACAAAATCAGGCTCTGACGGTTAGAGCAGAGAGGGAAGTCCGTGCCAGGCACAGAGCATCATGGAGACAGTGGCCACCTCCTGGGGAAA-GGGATGCCACAG--GCCTCCCCTCCCTGGG------CACAGTTATGGAATT i macFas5.chr6 C 0 C 0 s cerAty1.NW_012001120v1 3531234 209 - 3647740 CCAACATTGTTCTGTTGGAGACCAGTAGCACTGGTGGAGGTTGACAAGGAGAAAGGAAATGGGCATCAATCAGGAGAACAAAATCAGGCTCTGACGGTTAGAGCAGAGAGGGAAGTCCGTGCCAGGCACAGAGCATCATGGAGACAGTGGCCACCTCCTGGGGAAA-GGGATGCCACGG--GCCTCCCCTCCCTGGG------CACAGTTATGGAATT i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79666033 208 + 82825804 CCAACGTTGTTCTGTTGGAGACCAGTAGCACTGGTGGACGTTGACAAGGAGAAAGACAA--GGCATCAATCAGGAGAACAAAATCAGGCCCTGACGGTTAGAGCAGAGAGGGAAGTCCGTGCCAGGCACAGAGCATCATGGAAACGGTGGCCGCCTCCTGGGGAAAGGGGATGCCACGG--GCCTCCCCTCCCTGGG------CACAGTTATGGAATT i chlSab2.chr23 C 0 C 0 e macNem1.NW_012020287v1 3808760 7688 + 4899514 I e colAng1.NW_012117422v1 113096 65357 - 815015 T e manLeu1.NW_012103876v1 1625064 53215 - 1768974 T a score=588247.000000 s hg38.chr5_KI270795v1_alt 98658 116 + 131892 TGAAGGCTGGGAAAGCATGTGGGAAATCAGAGGCCCCTCCCTCGCTGTAGGGAGGAAGTGATCCAGGCTGTGGAGAGGACTCTAGAGATGAGCACACTAGAGCCTCTGGGGTTGGC s panTro5.chr5 3422439 116 - 181907262 TGAGGGCTGGGAAAGCATGTGGGAAATCAGAGGCCCCTCCCTCACTGCAGGGAGAAAGTGATCCAGGCTGTGGAGAGGACTCTAGAGATGAGCACACTAGAGCCTCTGGGGTTGGC i panTro5.chr5 C 0 C 0 s panPan2.chrUn_NW_014024182v1 4595 116 - 22698 TGAGGGCTGGGAAAGCATGTGGGAAATCAGAGGCCCCTCCCTCACTGCAGGGAGGAAGTGATCCAGGCTGTGGAGAGGACTCTAGAGATGAGCACACTGGAGCCTCTGGGGTTGGC i panPan2.chrUn_NW_014024182v1 C 0 C 0 s gorGor5.CYUI01000356v1 77532 116 + 152767 TGAGGGCTGGGAAAGCATGTGGGAAATCAGAGGCCCCTCCCTCGCTGCAGGGAGGAAGTGATCCAGGCTGTGGAGAGGACTCTAGAGATGAGCACACTAGAGCCTCTGGGGTTGGC i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160317392 111 - 163208435 TGAGGGCTGGGAAAGTGAGTGGGAAATCAGAGGCCACTCCCTCGCTGCAGGGAGGAAGTGATCCAGGCTGTGGAGAGGACTC-----ATGAGCACACTAGAGCCTCTGGGGTTGGT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3599441 116 - 180051392 TGAGGGCCAGGAAAGCGTGTGGGAAACCCGAGGGCCCTCCCTCCCTGCAGGGAGGAAGTGATCCAGGCTGTGGAGAGAACTCTAGAGAAGAGCACACTAGAGCCTCTGGGGTTGGC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3786446 116 - 181584905 TGAGGGCCAGGAAAGCGTGTGGGAAACCCGAGGGCCCTCCCTCCCTGCAGGGAGGAAGTGATCCAGGCTGTGGAGAGAACTCTAGAGAAGAGCACACTAGAGCCTCTGGGGTTGGC i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 956554 114 - 4899514 TGAGGGCTGGGAAAGCGTGTGGGAAGTCAGAAGCTCGTCCCTCACTGCAGAGAGGAAGTGATCCAGGCTGCGGAGGAGGCTT--GAGATAAGCACACCTGAGCCTGTGGGGTTGGC i macNem1.NW_012020287v1 n 7688 C 0 s cerAty1.NW_012001120v1 3531443 116 - 3647740 TGAGGGCCGGGAAAGCGTGTGGCAAACCCGAGGCCCCTCCCTCGCTGCAGGAAGGAGGTGATCCAGGCTGTGGAGAGAACTCTAGAGAAGAGCACACTAGAGCCTCTGGGGTTGGC i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79666241 116 + 82825804 TGAGGGCCGGGAAAGCGTGTGGGAAACCCGAGGCCCCTCCCTTGCTGCAGGGAGGAAGTGATCCAGGCTGTGGAGAGAACTCTAGAGAAGAGCACACTAGAGCCTCTGGGGCTGGC i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1571849 113 - 1768974 TGAGGGCTGGGAAAGCGTGTGGG-AGTCAGAAGCTCCTCCCTCACTGCAGAGAGGAAGTGATCCAGGCTGCGGAGAAGGCTT--GAAATAAGCACACCTGAGCCTGTGGGGTTGGC i manLeu1.NW_012103876v1 T 53215 C 0 s colAng1.NW_012117422v1 606490 114 + 815015 TGAGGGCTGGGAAAGCGTGTGGGAAGTCAGAAGCTCCTCCCTCACTGCAGGGAGGAAGTGATCCAGGCTGCAGAGAAGGCTT--GAGATAAGCACACCTGAGCCTGTGGGGTTGGC i colAng1.NW_012117422v1 n 65357 n 65357 a score=550384.000000 s hg38.chr5_KI270795v1_alt 98774 105 + 131892 GTCACAGCCCCAGGACAGCGGGGCCCAAATGGCCCCTCGACTCTAACTCTCCCCTTTCCTTCCCATGGCTGCCCCATCACCGCTGCTGCTCCGGACACCCTGAAG s panTro5.chr5 3422555 105 - 181907262 GTCGCAGCCCCAGGACAGCGGGGCCCAAATGGCCCCTCGACTCTAACTCTTCCCTTTCCTTCCCACGGCCGCCCCATCACCGCTGCTGCTCCGGACACCCTGAAG i panTro5.chr5 C 0 C 0 s panPan2.chrUn_NW_014024182v1 4711 105 - 22698 GTCACAGCCCCAGGACAGCGGGGCCCAAATGGCCCCTCGACTCTAACTCTTCCCTTTCCTTCCCACGGCCGCCCCATCACCGCTGCTGCTCCGGACACCCTGAAG i panPan2.chrUn_NW_014024182v1 C 0 C 0 s gorGor5.CYUI01000356v1 77648 105 + 152767 GTCACAGCCCCAGGACAGCGGGGCCCAAATGGCCCCTCGACTCTAACTCTCCCCTTTCCTTCCCATGGCTGCCCCATCACCGCTGCTGCTCCGGACACCCTGAAG i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160317503 105 - 163208435 GTCACAGCCCCAGGACAGCGGGGCCCAAATGGCCCCTCGACTCTAGCTCTCCCCTTTCCTTCCCATGGCCGCCCGATCACCGCTGCTGCTCCGGACACCCTGAAG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3599557 105 - 180051392 GTCACAGCCCCAGGACAGAGGGGCCCAAATGCCCCCTTGACTCCAACTCTCCCCTTTCCTTCCCATGGCTGCCCCATCACCGCTGCTGCTCCGGACACCCTGAAG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3786562 105 - 181584905 GTCACAGCCCCAGGACAGAGGGGCCCAAATGCCCCCTTGACTCCAACTCTCCCCTTTCCTTCCCATGGCTGCCCCATCACCGCTGCTGCTCCCGACACCCTGAAG i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 956668 105 - 4899514 TCCCCAGCCTGAGGACACCAGAGCCGGAGTGCTCCCTCCACTCTAACTATCCCCTTTTCTTCCCATGGCCACCCGGTCACCGCTGCTCCTCCGGACACCCTGAAG i macNem1.NW_012020287v1 C 0 n 0 s cerAty1.NW_012001120v1 3531559 105 - 3647740 GTCACAGCCCCAGGACAGAGGGGCCCAAATGCCCCCTTGACTCCAACTCTCCCCTTTCCTTCCCATGGCTGCCCCATCACCGCTGCTGCTCTGGACACCCTGAAG i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79666357 104 + 82825804 GTCACAGCCCCAGGACAGCGAGGCCCAAATG-CCCCTCGACTCCAACTCTCCCCTTTCCTTCCCATGGCTGCCCCATCACCGCTGCTGCTCCGGACACCCTGAAG i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1571962 105 - 1768974 TCCCCAGCCTGAGGACACCAGAGCCCGAGTGCCCCCTCCACTCTAACTCTCCCCTTTTCTTCGCATGGCCGCCCTGTCACCGCTGCTCCTCCGGACACCCTGAAG i manLeu1.NW_012103876v1 C 0 I 66606 s colAng1.NW_012117422v1 47739 105 - 815015 TCCCCAGCCTGAGGACACCAGGGCCCGAGTGCCCCCTCCACTCTAACTCTCCCCTTTCCTTCCCATGGCCGCCCTGTCACCGCTGCTCCTCCGGACACCCTGAAG i colAng1.NW_012117422v1 T 65357 I 72801 a score=12860.000000 s hg38.chr5_KI270795v1_alt 98879 5 + 131892 GTCAT s panTro5.chr5 3422660 5 - 181907262 GTCAT i panTro5.chr5 C 0 C 0 s panPan2.chrUn_NW_014024182v1 4816 5 - 22698 GTCAT i panPan2.chrUn_NW_014024182v1 C 0 C 0 s gorGor5.CYUI01000356v1 77753 5 + 152767 GTCAT i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160317608 4 - 163208435 GTCA- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3599662 5 - 180051392 GTCAT i rheMac8.chr6 C 0 I 8247 s macFas5.chr6 3786667 5 - 181584905 GTCAT i macFas5.chr6 C 0 C 0 s cerAty1.NW_012001120v1 3531664 5 - 3647740 GTCAT i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79666461 5 + 82825804 GTCAT i chlSab2.chr23 C 0 C 0 e macNem1.NW_012020287v1 956773 0 - 4899514 I e colAng1.NW_012117422v1 47844 72801 - 815015 I e manLeu1.NW_012103876v1 1572067 66606 - 1768974 I a score=156290.000000 s hg38.chr5_KI270795v1_alt 98884 68 + 131892 TTGGCCAATTTAATGCCGACAGAAGAGGCCACC------ATCTGAATGTAATTTATCTCCTCTTTCATCTCCTT s panTro5.chr5 3422665 68 - 181907262 TTGGCCAATTTAATGCCGGCAGAAGAGGCCACC------ATCTGAATGTAATTTATCTCCTCTTTCATCTCCTT i panTro5.chr5 C 0 C 0 s panPan2.chrUn_NW_014024182v1 4821 68 - 22698 TTGGCCAATTTAATGCCGGCAGAAGAGGCCACC------ATCTGAATGTAATTTATCTCCTCTTTCATCTCCTT i panPan2.chrUn_NW_014024182v1 C 0 C 0 s gorGor5.CYUI01000356v1 77758 68 + 152767 TTGGCCAATTTAATGCCGACAGAAGAGGCCACC------ATCTGAATGTAATTTATCTCCTCTTTCATCTCCTT i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160317612 68 - 163208435 TTGTCCAATTTAATGCCGACAGAAGAGGCCACT------GTCTGAATGTAATTTATCTCCTCtttcatctcctt i nomLeu3.chr2 C 0 C 0 s macFas5.chr6 3786672 68 - 181584905 ATGGCCAATTTAATGCCAACAGAAGAGGCCACC------ATCGGAATGTAATTTGTCTCCTCCTTCATCCCCTC i macFas5.chr6 C 0 C 0 s cerAty1.NW_012001120v1 3531669 74 - 3647740 TTGGCCAATTTAATGCCGACAGAAGAGGCCACTATCGGAATCGGAATGTAATTTGTCTCCTCTTTCATCTCCTT i cerAty1.NW_012001120v1 C 0 I 8842 s chlSab2.chr23 79666466 67 + 82825804 CTGGCCAATTTAATGCCGACAGAAGAGGCCACC------ATCGGAATGTAATTCATCTCCTCTTTCATCTCCT- i chlSab2.chr23 C 0 C 0 e macNem1.NW_012020287v1 956773 0 - 4899514 I e rheMac8.chr6 3599667 8247 - 180051392 I e colAng1.NW_012117422v1 47844 72801 - 815015 I e manLeu1.NW_012103876v1 1572067 66606 - 1768974 I a score=281458.000000 s hg38.chr5_KI270795v1_alt 98952 188 + 131892 TCATTCCCCTCCTCCttttttt---------------------------------ttttttttt--gggacagagtctcactctgttgcccaggctggagtgcagtggcgtgatcttggctcactgcaagctctgcctcccaggttcacgccattctcctgcctcagcctcctgagtagctgggactacaggcacccgccaccacg------------cccagctaattttttgt s panTro5.chr5 3422733 189 - 181907262 TCATTCCCCTCCTCCTTTTTTT--------------------------------GGGGGTGGGG--GGgacagagtctcactctgttgcccaggctggagtgcagtggcgtgatcttggctcactgcaagctttgcctcccaggcccacgccattctcctgcctcagcctcctgagtagctgggactacaggcacccgccaccagg------------cccagctaattttttgt i panTro5.chr5 C 0 C 0 s panPan2.chrUn_NW_014024182v1 4889 189 - 22698 TCATTCCCCTCCTCCTTTTTTT--------------------------------GGGGGTTGGG--GGgacagagtctcactctgttgcccaggctggagtgcagtggcgtgatcttggctcactgcaagctttgcctcccaggcccacgccattctcctgcctcagcctcctgagtagctgggactacaggcacccgccaccagg------------cccagctaattttttgt i panPan2.chrUn_NW_014024182v1 C 0 C 0 s gorGor5.CYUI01000356v1 77826 191 + 152767 TCATTCCCCTCCTCCTTTTTTT--------------------------------GGGGGGTGGGGAGGgacagagtctcactctgttgcccaggctggagtgcagtggcgtgatcttggctcactgcaagctccgcctcccaggttcacgccattctcctgcctcagcctcctgagtagctgggactacaggcacccgccaccacg------------cccagctaattttttgt i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160317680 221 - 163208435 tcattcccctcctcttttttttttcttttctttttttctttttctttctttttttttttttttt--gagatggagtctcactctgttgctcaggctggagtgcagtggtgcgatcttggctcactgcaagctccgcctcccaggttcacgccattctcctgcctcagcctcctgagtagctgggactacaggtgcccgccaccatg------------cccggctaattttttgt i nomLeu3.chr2 C 0 C 0 s macFas5.chr6 3786740 198 - 181584905 -----------TTCttttttat----------------------tttttatttttattttttct--gagac--agtctctctctgtcgcccaggctgcagtgcagtggtgccatcctggcttactgaaagctcggcctcccgggttcacgccattctcctgcctcagcctcctgagtagctgggactacaggcacccgccaccaagcccggctccaaccccggctaatttttttt i macFas5.chr6 C 0 C 0 s chlSab2.chr23 79666533 196 + 82825804 TCA-TCCCCTCTtcttttttat----------------------tttttatttttattttttct--gagac--agtctctctctgtcgcccaggctggagtgcagtggtgccatcctggctcactgcaagctccgcctcccgggttcacgccgttctcctgcctcagcctcctgagtagctgggactacaggcacccgccaccaaa------------cccggctaattttttgt i chlSab2.chr23 C 0 I 8668 e cerAty1.NW_012001120v1 3531743 8842 - 3647740 I e macNem1.NW_012020287v1 956773 0 - 4899514 I e rheMac8.chr6 3599667 8247 - 180051392 I e colAng1.NW_012117422v1 47844 72801 - 815015 I e manLeu1.NW_012103876v1 1572067 66606 - 1768974 I a score=25527.000000 s hg38.chr5_KI270795v1_alt 99140 22 + 131892 gtttttagtagagacgaggttt s panTro5.chr5 3422922 22 - 181907262 gttttcagtagagacggggttt i panTro5.chr5 C 0 C 0 s panPan2.chrUn_NW_014024182v1 5078 22 - 22698 gttttcagtagagacggggttt i panPan2.chrUn_NW_014024182v1 C 0 C 0 s gorGor5.CYUI01000356v1 78017 22 + 152767 gtttttagtagagacgaggttt i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160317901 22 - 163208435 atttttagtagagatggggttt i nomLeu3.chr2 C 0 I 7176 s macFas5.chr6 3786938 22 - 181584905 ttttttagtagagacgtggctt i macFas5.chr6 C 0 I 7644 e cerAty1.NW_012001120v1 3531743 8842 - 3647740 I e macNem1.NW_012020287v1 956773 0 - 4899514 I e rheMac8.chr6 3599667 8247 - 180051392 I e colAng1.NW_012117422v1 47844 72801 - 815015 I e manLeu1.NW_012103876v1 1572067 66606 - 1768974 I e chlSab2.chr23 79666729 8668 + 82825804 I a score=2797.000000 s hg38.chr5_KI270795v1_alt 99162 6 + 131892 -agcgtg s panTro5.chr5 3422944 7 - 181907262 caccgtg i panTro5.chr5 C 0 C 0 s panPan2.chrUn_NW_014024182v1 5100 7 - 22698 caccgtg i panPan2.chrUn_NW_014024182v1 C 0 C 0 s gorGor5.CYUI01000356v1 78039 6 + 152767 -accgtg i gorGor5.CYUI01000356v1 C 0 C 0 e nomLeu3.chr2 160317923 7176 - 163208435 I e cerAty1.NW_012001120v1 3531743 8842 - 3647740 I e macNem1.NW_012020287v1 956773 0 - 4899514 I e rheMac8.chr6 3599667 8247 - 180051392 I e macFas5.chr6 3786960 7644 - 181584905 I e colAng1.NW_012117422v1 47844 72801 - 815015 I e manLeu1.NW_012103876v1 1572067 66606 - 1768974 I e chlSab2.chr23 79666729 8668 + 82825804 I a score=1438655.000000 s hg38.chr5_KI270795v1_alt 99168 313 + 131892 tCTATGTGACACCCCAGGATTTTAGCAGATACACAAGTGAAAAACCATGTTGCTAAAAA---GTATTTCCCATCTTCCAATTTTCTTATCATCATCTTGGAAATAAAATCTGTACGTACTTGGGAATAAAATTTATTGAATTATCAAAAATATGTATGCTAATGTATGTGAGTCATTAGCTATATCCACATTGACATAAAATTTGTGAAGACTCTTCAAAATCTCTTAAAGATTTATTTggctgggcgcggtggctcacgcctgtaatcccagcagtttgggaggctgaggcaggcggatcatgaggtcaggagat s panTro5.chr5 3422951 313 - 181907262 tCTATGTGACACCCCAGGATTTTAGCAGATATACAAGTGAAAAACCATGTTGCTAAAAA---GTATTTCCCATCTTCCAATTTTCTTATCGTCATCTGGGAAATAAAATCTGTATGTACTTGGGAATAAAATTTATTGAATTATCAAAAATATATATGCTAATGTATGTGAGTCATTAGCTATATCCACATTGACATAAAATTTGTGAAGACTCTTCAAACTCTCTTAAAGATTTATTTggccgggcgtggtggctcacgcctgtaatcccagcagtttgggaggcagaggcgggcggatcatgaggtcaggagat i panTro5.chr5 C 0 C 0 s panPan2.chrUn_NW_014024182v1 5107 313 - 22698 tCTATGTGACACCCCAGGATTTTAGCAGATATACAAGTGAAAAACCATGTTGCTAAAAA---GTATTTCCCATCTTCCAATTTTCTTATCGTCATCTGGGAAATAAAATCTGTATGTACTTGGGAATAAAATTTATTGAATTATCAAAAATATATATGCTAATGTATGTGAGTCATTAGCTATATCCACATTGACATAAAATTTGTGAAGACTCTTCAAACTCTCTTAAAGATTTATTTggccgggcgtggtggctcacgcctgtaatcccagcagtttgggaggcagaggcgggcggatcatgaggtcaggagat i panPan2.chrUn_NW_014024182v1 C 0 C 0 s gorGor5.CYUI01000356v1 78045 313 + 152767 tCTATGTGACACCCCAGGATTTTAGCAGATATACAAGTGAAAAACCATGTTGCTAAAAA---GTATTTCCCACCTTCCAATTTTCTTATCGTCATCTTGGAAATAAAATCTGTACGTACTTGGGAATAAAATTTATTGAATTATCAAAAATATATATGCTAATGTATGTGAGTCATTAGCTATATCCACATTGACATAAAATTTGTGAAGACTCTTCAAACTCTCTTAAAGATTTATTTggccgggcgcggtggctcacgcctgtaatcccagcagtttgggaggcagaggcaggcggatcatgaggtcaggagat i gorGor5.CYUI01000356v1 C 0 C 0 s rheMac8.chr6 3607914 313 - 180051392 TCTATGTGATGCCCCAGGGTTTTAAAAGAAATACAAGTAAAAAATCATGTAGCTAAAAAAACATATTTCCCATCTTCCAGTTTTCTT---GTCATCTGGGAAATAAAATCTCTATGTACTTGGGGATAAAATTTATTGAATTATCAAAAATATATACGCTAATGTATGTGAGTCATTAGCTATATCCACATTGAAATAAAATTTGTGAAGACTCTTCAAAGTCTCTCAAAGATTTATTTggccgggcgccctggctcacgcctgtaatcccagtactttgggaggccaaggcgggcggatcacgaggtcaggagat i rheMac8.chr6 I 8247 C 0 s macFas5.chr6 3794604 313 - 181584905 TCTATGTGACGCCCCAGGGTTTTAAAAGAAATACAAGTAAAAAATCATGTAGCTAAAAAAACATATTTCCCATCTTCCAGTTTTCTT---CTCATCTGGGAAATAAAATCTCTATGTACTTGGGGATAAAATTTATTGAATTATCAAAAATATATACGCTAATGTATGTGAGTCATTAGCTATATCCACATTGAAATAAAATTTGTGAAGACTCTTCAAAGTCTCTCAAAGATTTATTTggccgggcgcggtggctcacgcctgtaatcccagtactttgggaggccaaggcgggcggatcacgaggtcaggagat i macFas5.chr6 I 7644 C 0 s macNem1.NW_012020287v1 3816448 313 + 4899514 TCTATGTGACGCCCCAGGGTTTTAAAAGAAATACAAGTAAAAAATCATGTAGCTAAAAAAACATATTTCCCATCTTCCAGTTTTCTT---GTCATCTGGGAAATAAAATCTCTATGTACTTGGGGATAAAATTTATTGAATTATCAAAAATATATACGCTAATGTATGTGAGTCATTAGCTATATCCACATTGAAATAAAATTTGTGAAGACTCTTCAAAGTCTCTCAAAGATTTATTTggccaggcgccgtggctcacgcctgtaatcccagtactttgggaggccaaggcgggcggatcacgaggtcaggagat i macNem1.NW_012020287v1 I 7688 C 0 s cerAty1.NW_012001120v1 3540585 313 - 3647740 TCTATGTGACGCCCCAGGGTTTTAAAAGAAATACAAGTGAAAAATCATGTTGCTAAAAAAACATATTTCCCATCTTCCAGTTTTCTT---GTCGTCTGGGAAATAAAATCTCTATGTACTTGGGGATAAAATTTATTGAATTATCAAAAATATATACGCTAATGTATGTGAGTCATTAGCTATATCCACATTGAAATAAAATTTGTGAAGACTCTTCAAACTCTCTCAAAGATTTATTTggccgggcgccgtggctcacgcctgtaatcccagcactttgggaggccgaggggggcggatcacaaggtcaggagat i cerAty1.NW_012001120v1 I 8842 I 1639 s chlSab2.chr23 79675397 313 + 82825804 TCTATGTGACGCCCCAGGGTTTTAAAAGAAATACAAGTGAAAAATCATGTTGCTAAAAAAACATATTTCCCATCTTCCAGTTTTCTT---GTCATCTGGGAAATAAAATCTCTATGTACTTGGGGATAAAATTTATTGAATTATCAAAAATATATACGCTAATGTATGTGAGTCATTAGCTATATCCACATTGAAATAAAATTTGTGAAGACTCTTCAAACTCCCTCAAAGATTTATTTggctgggcgccgtggctcacgcctgtaatcccagcactttgggaggtcaaggcgggcggatcacgaggtcgggagat i chlSab2.chr23 I 8668 C 0 s manLeu1.NW_012103876v1 1638673 313 - 1768974 TCTATGTGACGCCCCAGGGTTTTAAAAGAAATACAAGTGAAAAATCATGTTGCTAAAAAAACATATTTCCCATCTTCCAGTTTTCTT---GTCGTCTGGGAAATAAAATCTCTATGTACTTGGGGATAAAATTTATTGAATTATCAAAAATATGTACGCTAATGTATGTGAGTCATTAGCTATATCCACATTGAAATAAAATTTGTGAAGACTCTTCAAACTCTCTCAAAGATTTATTTggccgggcgccgtggctcacacctgtaatcccagcactttgggaggccgaggcgagcggatcacgaggtcaggagat i manLeu1.NW_012103876v1 I 66606 C 0 s colAng1.NW_012117422v1 120645 312 - 815015 TCTATGTGACACCCCAGGGTTTTAAAAGAAATACAAGTGAAAAATCATGTTGCT-AAAAAACATATTTCCCATCTTCTGGTTTTCTT---GTCATCTGGGAAATAAAATCTCTATGTACTTGGGGATAAAATTTATTGAATTATCAAAAATATATATGCTAATGTATGTGAGTCATTAGCTATATCCACGTTGAAATAAAATTTGTGAAGACTCTTCAGATTCTCTCAAAGATTTATTTggccaggcgccgtggctcacgcctgtaatcccagcactttgggaggccaaggcgggtggatcatgaggtcaggagat i colAng1.NW_012117422v1 I 72801 C 0 e nomLeu3.chr2 160317923 7176 - 163208435 I a score=225785.000000 s hg38.chr5_KI270795v1_alt 99481 60 + 131892 ggagaccatcctggctaacacggtgaaaccccgtctctactaaaaatacaaaaaactagc s panTro5.chr5 3423264 60 - 181907262 tgagaccatcctggctaacacggtgaaaccccgtctctactaaaaatacaaaaaattagc i panTro5.chr5 C 0 I 369 s panPan2.chrUn_NW_014024182v1 5420 60 - 22698 tgagaccatcctggctaacacggtgaaaccccgtctctactaaaaatacaaaaaattagc i panPan2.chrUn_NW_014024182v1 C 0 C 0 s gorGor5.CYUI01000356v1 78358 60 + 152767 cgagagcatcctggctaacacggtgaaaccccgtctctactaaaaatacaaaaaattagc i gorGor5.CYUI01000356v1 C 0 C 0 s rheMac8.chr6 3608227 60 - 180051392 cgagcccatcctggctaacacagtgaaaccccgtctctactaaaaatacaaaaaattagc i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3794917 60 - 181584905 cgagcccatcctggctaacatagtgaaaccccgtctctactaaaaatacaaaaaattagc i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3816761 60 + 4899514 cgagcccatcctggctaacatagtgaaaccccgtctctactaaaaatacaaaaaattagc i macNem1.NW_012020287v1 C 0 C 0 s chlSab2.chr23 79675710 60 + 82825804 tgagcccatcttggctaacatagtgaaaccccgtctctactaaaaatacaacaaattagc i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1638986 60 - 1768974 agagcccagcctgactaacacagtgaaaccccgtctgtactaaaaatacaaaaaattagc i manLeu1.NW_012103876v1 C 0 C 0 s colAng1.NW_012117422v1 120957 60 - 815015 cgagcccatcctggctaacatagtgaaactctgtctctactaaaaatacaaaaaattagc i colAng1.NW_012117422v1 C 0 C 0 e nomLeu3.chr2 160317923 7176 - 163208435 I e cerAty1.NW_012001120v1 3540898 1639 - 3647740 I a score=426024.000000 s hg38.chr5_KI270795v1_alt 99541 151 + 131892 tgggcgtggtggc----gc-------------------gcgcctgtagtcccagctactcgggaggctgaggcaggagaatggcgtgaacccgggaggcggagctcggagtgagccgagatcacgccactgcactccagcctgggtgacagagcgagga-------ctctgtctcaaaaaa s panPan2.chrUn_NW_014024182v1 5480 174 - 22698 caggcgtggtggccggtgcctgcagtcccaggtggccagtgcctgtagtcccagctacttgggaggctgaggcaggagaatggcgtgagcccgggaggcggagctcggagtgagctgagatcatgccactgcactccagcctgggtgacagagcgagga-------ctctgtctcaaaaaa i panPan2.chrUn_NW_014024182v1 C 0 C 0 s gorGor5.CYUI01000356v1 78418 150 + 152767 cgggcgtggtggccg-----------------------gtgcctgtagtcccagctacttgggaggctgaggcaggagaatggcgtgaacctgggaggcggagctcagagtgagccgagatcacaccactgcactccagcctgggtgacagagcgagga-------ctc-gtctcaaaaaa i gorGor5.CYUI01000356v1 C 0 C 0 s rheMac8.chr6 3608287 150 - 180051392 tgggcatggtggtgg-----------------------gtgcctgtagtcccagttactcggcaggctgaggcaggagaatggcacaaacctgggaggcggagcttgcagtgagccaagattgcaccattgcactccagcctgggtgacagagcga-ga-------ctctgtctcaaaaaa i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3794977 157 - 181584905 tgggcatggtggtgg-----------------------gtgcctgtagtcccagttactcggcaggctgaggcaggagaatggcacaaacctgggaggcggagcttgcagtgagccaagattgcaccattgcactccagcctgggtgacagagcga-gactctgtcctctgtctcaaaaaa i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3816821 150 + 4899514 tgggcatggtggtgg-----------------------gtgcctgtagtcccagctactcggcaggctgaggcaggagaatcgcacaaaccagggaggcggagcttgcagtgagccaagattgcaccattgcactccagcctgggtgacagagcga-ga-------ttctgtctcaaaaaa i macNem1.NW_012020287v1 C 0 I 1424 s chlSab2.chr23 79675770 150 + 82825804 tgggcatggtggtgg-----------------------gtgcctgtagtcccagttactcggcaggctgaggcaggagaatggcacaaacctgggaggcggagcttgcagtgagccaagattgtgccactgcactccagcctgggtgacagagtga-ga-------ctctgtctcaaaaaa i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1639046 150 - 1768974 cgggcgtggtggtgg-----------------------gtgcctgtagtcccagttactcggcaggctgaggcaggagaatggcacaaacccaggaggcggagcttgcagtgagccgagatcgcgccactgcactccagcctgggcgacagagcga-ga-------ctctgtctcaaaaaa i manLeu1.NW_012103876v1 C 0 C 0 s colAng1.NW_012117422v1 121017 150 - 815015 tgggcctggtggtgg-----------------------gtgcctgtagtcccagttactcggcaggctgaggcaggagaatggcacaaacctgggaggcggagcttgcagtgagccaagattgcaccactgcactccagcctgggtgacagagcga-ga-------ctctgtctcaaaaaa i colAng1.NW_012117422v1 C 0 C 0 e nomLeu3.chr2 160317923 7176 - 163208435 I e cerAty1.NW_012001120v1 3540898 1639 - 3647740 I e panTro5.chr5 3423324 369 - 181907262 I a score=2548.000000 s hg38.chr5_KI270795v1_alt 99692 1 + 131892 a s panPan2.chrUn_NW_014024182v1 5654 1 - 22698 a i panPan2.chrUn_NW_014024182v1 C 0 C 0 s gorGor5.CYUI01000356v1 78568 1 + 152767 a i gorGor5.CYUI01000356v1 C 0 C 0 s rheMac8.chr6 3608437 1 - 180051392 a i rheMac8.chr6 C 0 I 1407 s macFas5.chr6 3795134 1 - 181584905 a i macFas5.chr6 C 0 C 0 s chlSab2.chr23 79675920 1 + 82825804 a i chlSab2.chr23 C 0 I 1420 s manLeu1.NW_012103876v1 1639196 1 - 1768974 a i manLeu1.NW_012103876v1 C 0 I 1419 s colAng1.NW_012117422v1 121167 1 - 815015 a i colAng1.NW_012117422v1 C 0 I 1454 e nomLeu3.chr2 160317923 7176 - 163208435 I e cerAty1.NW_012001120v1 3540898 1639 - 3647740 I e macNem1.NW_012020287v1 3816971 1424 + 4899514 I e panTro5.chr5 3423324 369 - 181907262 I a score=4764.000000 s hg38.chr5_KI270795v1_alt 99693 13 + 131892 ggaaaaat-aaaaa s panPan2.chrUn_NW_014024182v1 5655 14 - 22698 ggaaaaataaaaaa i panPan2.chrUn_NW_014024182v1 C 0 C 0 s gorGor5.CYUI01000356v1 78569 14 + 152767 ggaaaaataaaaaa i gorGor5.CYUI01000356v1 C 0 C 0 s macFas5.chr6 3795135 13 - 181584905 -aaaaaaaaaaaaa i macFas5.chr6 C 0 I 1399 e nomLeu3.chr2 160317923 7176 - 163208435 I e cerAty1.NW_012001120v1 3540898 1639 - 3647740 I e macNem1.NW_012020287v1 3816971 1424 + 4899514 I e rheMac8.chr6 3608438 1407 - 180051392 I e colAng1.NW_012117422v1 121168 1454 - 815015 I e manLeu1.NW_012103876v1 1639197 1419 - 1768974 I e chlSab2.chr23 79675921 1420 + 82825804 I e panTro5.chr5 3423324 369 - 181907262 I a score=42620.000000 s hg38.chr5_KI270795v1_alt 99706 172 + 131892 CACGAGAACGTACTGCAGGAGAAAACAGGCCTGGCCTGAGACGGCTGTGCCGGCTTTCTGAGGCCGTGAATGGCAAGACC-TCGAGACTGTCAAGAGGAGCAAGAGGAGTCAGTGGGATTTAGCGTCAGTGATGAGGTGCGCCACTCACTGTGTGACTTCAGAGTGTTTCTGG s panPan2.chrUn_NW_014024182v1 5669 173 - 22698 cacaagaaCATACTGCAGGAGAAAACATGCCTGGTCTGAGACGGCTGTGCCAGCTTTCTGAGGCCTTGAATGGCAAACCCTTTGAGACTGTCAAGAGGGGCAAGAGGACTCGGTGGGATTCAGCATCAGTGATGAGGTGCACCACTCACTGTGTGACTTCAGAGTAGTTCCAG i panPan2.chrUn_NW_014024182v1 C 0 C 0 s gorGor5.CYUI01000356v1 78583 173 + 152767 CACGAGAACATACTGCAGGAGAAAACATGCCTGGTCTGAGACGGCTGTGCCAGCTTTCTGAGGCCTTGAATGGCAAGCCCTTTGAGACTGTCAAGAGGAGCAAGAGGAGTCGGTGGGATTTAGCATCAGTGATGAGGTGCGCCACTCACTGTGTGACTTCCGAGTGGTTCCGG i gorGor5.CYUI01000356v1 C 0 C 0 e nomLeu3.chr2 160317923 7176 - 163208435 I e cerAty1.NW_012001120v1 3540898 1639 - 3647740 I e macNem1.NW_012020287v1 3816971 1424 + 4899514 I e rheMac8.chr6 3608438 1407 - 180051392 I e macFas5.chr6 3795148 1399 - 181584905 I e colAng1.NW_012117422v1 121168 1454 - 815015 I e manLeu1.NW_012103876v1 1639197 1419 - 1768974 I e chlSab2.chr23 79675921 1420 + 82825804 I e panTro5.chr5 3423324 369 - 181907262 I a score=20790.000000 s hg38.chr5_KI270795v1_alt 99878 40 + 131892 GGAAAGAAAATGAAGTCCTGTGAAGTATGCGGAGCACCCT s panTro5.chr5 3423693 40 - 181907262 GGAAAGAAAATGAATTCCTGTGAAGTATGGGGAGCACCCT i panTro5.chr5 I 369 I 30 s panPan2.chrUn_NW_014024182v1 5842 40 - 22698 GGAAAGAAAATGAAGTCCTGTGAAGTATGGGGAGCACCTT i panPan2.chrUn_NW_014024182v1 C 0 C 0 s gorGor5.CYUI01000356v1 78756 40 + 152767 GGAAGGAAAATGAAGTCCTGTGAAGTATGGGGAGCACCCT i gorGor5.CYUI01000356v1 C 0 C 0 e nomLeu3.chr2 160317923 7176 - 163208435 I e cerAty1.NW_012001120v1 3540898 1639 - 3647740 I e macNem1.NW_012020287v1 3816971 1424 + 4899514 I e rheMac8.chr6 3608438 1407 - 180051392 I e macFas5.chr6 3795148 1399 - 181584905 I e colAng1.NW_012117422v1 121168 1454 - 815015 I e manLeu1.NW_012103876v1 1639197 1419 - 1768974 I e chlSab2.chr23 79675921 1420 + 82825804 I a score=7122.000000 s hg38.chr5_KI270795v1_alt 99918 27 + 131892 CAGCAGCAGCCGTGGATCTGAACAGCC s panPan2.chrUn_NW_014024182v1 5882 27 - 22698 CAGCAGCAGTAGTGGATCTGAACAGCC i panPan2.chrUn_NW_014024182v1 C 0 C 0 s gorGor5.CYUI01000356v1 78796 27 + 152767 CAGCAGCAGTAGTGGATCTGAACAGCC i gorGor5.CYUI01000356v1 C 0 C 0 e nomLeu3.chr2 160317923 7176 - 163208435 I e cerAty1.NW_012001120v1 3540898 1639 - 3647740 I e macNem1.NW_012020287v1 3816971 1424 + 4899514 I e rheMac8.chr6 3608438 1407 - 180051392 I e macFas5.chr6 3795148 1399 - 181584905 I e colAng1.NW_012117422v1 121168 1454 - 815015 I e manLeu1.NW_012103876v1 1639197 1419 - 1768974 I e chlSab2.chr23 79675921 1420 + 82825804 I e panTro5.chr5 3423733 30 - 181907262 I a score=68716.000000 s hg38.chr5_KI270795v1_alt 99945 149 + 131892 TCCCAGACACAGACGCCATGGGTGTGAAGTG-TGTCAGGAACAAGCGAAGTCACCCACAATGGAGAGG-AAC-ACCCTAGTGTGCTAGAACTTTTGAACCACTTTTCCTCCTGTCTTGGGTCAGGCCTCATAGCTAACCCTTTG-GTGCGCGG s panTro5.chr5 3423763 148 - 181907262 TCCCAGACACAGACACCATGGGTGTGAAGTGGTCTCAG-AACAAGTAAA-TCACCCACAATGGAGAGGTAACTACCCGAG-GTGCTAGAACTTTTGAACCACTTTGCCTCCT--CTTGGGTCAGGCCTCATAGCTAACCCTTTGTGTGCGCGG i panTro5.chr5 I 30 I 173 s panPan2.chrUn_NW_014024182v1 5909 149 - 22698 TCCCAGACACAGACACCATGGGTGTGAAGTG-TCTCAGGAACAAGTGAAATCACCCACAATGGAGAGG-AAC-ACCCTAGGGTGCTAGAACTTTTGAACCACTTTTCCTCCTGTCTTGGGTCAGGCCTCATAGCTAACCCTTTG-GTGCGCGG i panPan2.chrUn_NW_014024182v1 C 0 C 0 s gorGor5.CYUI01000356v1 78823 149 + 152767 TCCCAGATACAGACACCATGGGTGTGAAGTG-TCTCAGGAACAAGCGAAATCACCCACAATGGAGAGG-AGC-ACCCTAGGGTGCTAGAACTTTTGAACCACTTTTCCTCCTGTCTTGGGTCAGGCCTCATAGCCAACCCTTTG-GTGCGCGG i gorGor5.CYUI01000356v1 C 0 C 0 e nomLeu3.chr2 160317923 7176 - 163208435 I e cerAty1.NW_012001120v1 3540898 1639 - 3647740 I e macNem1.NW_012020287v1 3816971 1424 + 4899514 I e rheMac8.chr6 3608438 1407 - 180051392 I e macFas5.chr6 3795148 1399 - 181584905 I e colAng1.NW_012117422v1 121168 1454 - 815015 I e manLeu1.NW_012103876v1 1639197 1419 - 1768974 I e chlSab2.chr23 79675921 1420 + 82825804 I a score=46665.000000 s hg38.chr5_KI270795v1_alt 100094 172 + 131892 TACTCTCTCTGGCTATTGGAGAGATGTGAGAAGCTTAAGAAAAGCAAATGAGAAGACGTGGAGCAGGCAGATGGCCGGTCCCCATGGAAGAGTCCCCATTGTGAGGCCTCCCTGGGGATCTGGTGGTGGCCACAACACACTGGCCGGTGAGATTGGTTGTGATTGTCATTGT s panPan2.chrUn_NW_014024182v1 6058 172 - 22698 TACTCTCCCTGACTATGGGAGAGATGTGAGAAGCTTAAGAAAAGCAAATGGGAAGACATGGAGCAGGCAGATGGCCGGTCCCCATGGAAGAGTCCCCATTGTGAGGCCTCCCTGGGGATATGGCGGTGGCCACAACACACTGGCCAGTGAGCTTGGTTGTGATTGTCATTGT i panPan2.chrUn_NW_014024182v1 C 0 C 0 s gorGor5.CYUI01000356v1 78972 172 + 152767 TACTCTCCCTGGCTATGGGAGAGATGTGAGAAGCTTAAGAAAAGCAAATGGGAAGACATGGAGCAGGCAGATGGCCGGTCCCCATGGAAGAGTCCCCATTGTGAGGCCTCCCTGGGGATCTGGCGGTGGCCACAACACACTGGCCAGTGAGATTGGTTGTGATTGTCATTGT i gorGor5.CYUI01000356v1 C 0 C 0 e nomLeu3.chr2 160317923 7176 - 163208435 I e cerAty1.NW_012001120v1 3540898 1639 - 3647740 I e macNem1.NW_012020287v1 3816971 1424 + 4899514 I e rheMac8.chr6 3608438 1407 - 180051392 I e macFas5.chr6 3795148 1399 - 181584905 I e colAng1.NW_012117422v1 121168 1454 - 815015 I e manLeu1.NW_012103876v1 1639197 1419 - 1768974 I e chlSab2.chr23 79675921 1420 + 82825804 I e panTro5.chr5 3423911 173 - 181907262 I a score=30570.000000 s hg38.chr5_KI270795v1_alt 100266 57 + 131892 TGTGGAAAATGATTATCATCTGTCCTCAATGGTGCCAATGCTGACTCACCTGGAGGT s panTro5.chr5 3424084 56 - 181907262 TGTGGAAAATGATTATCATCT-TCCTCAATGGTGCCAATGCTGACTCACCTGGAGGT i panTro5.chr5 I 173 I 1235 s panPan2.chrUn_NW_014024182v1 6230 57 - 22698 TGTGGAAAATGATTATCATCTGTCCTCAATGGTGCCAATGCTGACTCACCTGGAGGT i panPan2.chrUn_NW_014024182v1 C 0 C 0 s gorGor5.CYUI01000356v1 79144 57 + 152767 TGTGGAAAATGATTATCATCTGTCCTCAATGGTGCCAACGCTGACTCACCTGGAGGT i gorGor5.CYUI01000356v1 C 0 I 822 e nomLeu3.chr2 160317923 7176 - 163208435 I e cerAty1.NW_012001120v1 3540898 1639 - 3647740 I e macNem1.NW_012020287v1 3816971 1424 + 4899514 I e rheMac8.chr6 3608438 1407 - 180051392 I e macFas5.chr6 3795148 1399 - 181584905 I e colAng1.NW_012117422v1 121168 1454 - 815015 I e manLeu1.NW_012103876v1 1639197 1419 - 1768974 I e chlSab2.chr23 79675921 1420 + 82825804 I a score=20287.000000 s hg38.chr5_KI270795v1_alt 100323 22 + 131892 GGAATGATGGCCATGGTGACAC s panTro5.chr5 3425375 22 - 181907262 GGAATGATGGCCATGGTGACAT i panTro5.chr5 I 1235 C 0 s panPan2.chrUn_NW_014024182v1 6287 22 - 22698 GGAATGATGGCCATGGTGACAC i panPan2.chrUn_NW_014024182v1 C 0 I 172 s gorGor5.CYUI01000356v1 80023 22 + 152767 GGAATGATGGCCATGGTGACAT i gorGor5.CYUI01000356v1 I 822 C 0 s nomLeu3.chr2 160325099 22 - 163208435 GGAATGATGGCCATGGTGACAT i nomLeu3.chr2 I 7176 C 0 e cerAty1.NW_012001120v1 3540898 1639 - 3647740 I e macNem1.NW_012020287v1 3816971 1424 + 4899514 I e rheMac8.chr6 3608438 1407 - 180051392 I e macFas5.chr6 3795148 1399 - 181584905 I e colAng1.NW_012117422v1 121168 1454 - 815015 I e manLeu1.NW_012103876v1 1639197 1419 - 1768974 I e chlSab2.chr23 79675921 1420 + 82825804 I a score=1375245.000000 s hg38.chr5_KI270795v1_alt 100345 1574 + 131892 TGAGTCAGCACTTATTAGGTTCCACGTGTACATGGTCAAGTTTTCCTGTGGTTTTTCTCAGAAAGGAGCCATGATCCtgcaacagtgaaacaggaaaagtgctaacaaaactgactccatttttatttaatgggctttttctcatccctgcatataagctagcataattttagagcgctaagataaaacgcaaaagcggtaatcatgtagtttttgcaactaactgtgggattaatggaaagtatgtaaacagctaactgtggtttgttaaagatttataggagcattgtgatctgaccaaggagaaagaaggtcccagcctcctgggaccattgctgacacctggatgtgtgaggtagtcaggtacctgttgatcccaaccctctcctcttccACCCTCCGTTGAACCAGATAAGCGCTTGTCAGTGCTGTTTTGGGAGTATTCTGCCCTGTGGTTAAATAGGTGTGAGTGCTGGAGAGTCCTGCAGCAATCTGGGGCTTTCTGGTGCTGTGAAGACAGTTACTCTAAAAGTCTTGATGCCATCTCTGCACTTGGGTACAGTCGTGTGACTCTGGGTTTATGACAGATCCTTCAGCTACCCTACCTGCCACTCCATATCTGCTGAGATTTTCTTTCtttcttcttttgtttttgtttttgtt-----ttgggacggaatctcgctctgttgccaggctggagtgcagtagcatgatctcagctcactataacctctgtctccagggttcgagtgattctcctgcctcagcctcccgagtagctgggattacaggcgcccaccaccacatctagctaatttttgtatttttagtagacacagggtttcaccacgttggccaggatgggtctcgatctcttcacctcatgatccgcccgcctcggcctcccaaagtactgggattacaggtgtgagccaccgcgcccggcTGAGATTTTCATAATGTGTTTGAGACATGCTGTTTATTTCTTCttttttttttacttttaattgaaatattgtatacatagcaaaaagtcattcctgtcataaatgtacagctcaatgaattttcatgaaatttaatcattaaccagattgaaatgaaaaccacaacaaaacccatgactggaagccatccccgataagtcttctgcggccagcttcctgtggtgagcctccccatcaagggtaacTGCAGCCTCCTTGGAAATAAAGGAGATCAGGACTCcttttgtgtgagcttcatttactctgttttgcgagattggcccacgttgtcgcatgtgtttaaggatctgtccttcccgcggggacacagcgtgccagggctgaaatgtcctagaatctgttcacaggttctactgtcagtgagggtttgggtggttatggctttgggaggtgatgaaagtgctgcttt-------cctgtgagtgtctttggggagcacacacgctcttttctgccggatattctccacccaaggggtcgccggtcatcgcagatgtgcttgtccactttcagcagctactgac--agagtttcccaggtggagcgtgcaacggatatcacgccagctgaggaagac s panTro5.chr5 3425397 1576 - 181907262 TGAGTCAGCACTTATTAGGTTCCACGTGCACATGGTCAAGTTTTCCTGTGGTTTTTCTCAGAAAGGAGCCATGATCCtgtaacagtgaaataggaaaagtgctaacaaaactgactgcatttttatttaatgggctttttctcatccctgcatataagctagcataattttagagcgctaagataaaacgcaaaagcggtaatcatgtagtttttgcaactaactgtgggattaatggaaagtatgtaaacagctaactgtggtttgttaaagatttataggagcattgtgatctgatcaaggagaaagaaggtcccagcctcctgggaccattgctggcacctggatgtgtgaggtagtcaggtacctgttgatcccaaccctctcctcttccaccctcccttgaACCAGATAAGCGCTTGTCAGTGCTGTTTCGGGAGTATTCTGCCCTGTGGTTAAATAGGTGTCAGTGCTGGAGAGTCCTGCACCAATCTGGGGCTTTCTGGTGCTGTGAAGACAGTTACTCTAAAAGTCCTGATGCCATCTCTGCACTTGGGTGCAGTTGTGTGACTCTGGGTTTATGACAGATCCTTCAACTACCCTACCTGCCACTCCATATCTGCTGAGACTTTCTTTCtttcttcttttgtttttgtttttgtt----gttgggacggaatcttgctctgttgccaggctggagtgcagtagcctgatctcagctcactataacctctgtctccagggttcaagtgattctcctgcctcagcctcccgagtagctgggatgacaggtgcccaccaccacatctagctaatttttgtatttttagtagagacagggtttcaccatgttggccaggatgg-tctcaatctcttcacctcatgatccgcccgcctcggcctcccaaagtactggaattacaggtgtgagccacggcacccggcTGAGATTTTCATAATGTGTTTGAGACATGCTGTTTATTTCTTCtttttttttaacttttaattgaaatattgtatacatagcaaaaagtcattcctatcataaatgtacagctcaatgaattttcatgaaATTTAATCATTAACCAGATTGAAATGAAAACCACAGCAAAACCCATGACTGGAAGCCATCTCCGATAAGTCTTCTGTGGCCGGCTTCCTGTGGTAAGCCTCCCCATCAAGGGTAACTGCAGTCTCCTTGGAAATAAAGGAGATCAGGACTCcttttgtgtgagcttcatttactctgttttgcgagattggcccacattgtcgcatgtgtttaaggatctgtccttcccgcggggacatagcgtgccggggctgaaatgtcctagaatctgttcacaggttctactgtcagtgagggtttgggtggttacggctttgggaggtgatgaaagtgctgcttt-------cctgtgagtgtctttggggagcacacacgctcttttctgctggatattctccacccaaggggtcgccggtcatcacagatgtgcttgtccactttcagcagctactgactgagagtttcccagatggagcatgcaccggatgtcatgccagctgaggaagac i panTro5.chr5 C 0 C 0 s panPan2.chrUn_NW_014024182v1 6481 1573 - 22698 TGAGTCAGCACTTATTAGGTTCCACGTGCACATGGTCAAGTTTTCCTGTGGTTTTTCTCAGAAAGGAGCCATGATCCtgtaacagtgaaataggaaaagtgctaacaaaactgactgcatttttatttaatgggctttttctcatccctgcatataagctagcataattttagagcgctaagataaaacgcaaaagtggtaatcatgtag-ttttgcaactaactgtgggattaatggaaagtatgtaaacagctaactgtggtttgttaaagatttataggagcattgtgatctgatcaaggagaaagaaggtcccagcctcctgggaccattgctggcacctggatgtgtgaggtagtcaggtacctgttgatcccaaccctctcctcttccaccctcccttgaACCAGATAAGCGCTTGTCAGTGCTGTTTTGGGAGTATTCTGCCCTGTGGTTAAATAGGTGTCAGTGCTGGAGAGTCCTGCACCAATCTGGGGCTTTCTGGTGCTGTGAAGACAGTTACTCTAAAAGTCCTGATGCCATCTCTGCACTTGGGTGCAGTCGTGTGACTCTGGGTTTATGACAGATCCTTCAACTACCCTACCTGCCACTCCATATCTGCTGAGACTTTCTTTCtttcttcttttgtttttgtttttgtt----tttgggacggaatcttgctctgttgccaggttggagtgcagtagcctgatctcagctcactataacctctgtctccagggttcaagtgattctcctgcctcagcctcccgagtagctgggatgacaggtgcccaccaccacatctagctaatttttgtatttttagtagagacagggtttcaccatgttggccaggatgg-tctcgatctcttcacctcatgatccgcccgcctcggcctcccaaagtactggaattacaggtgtgagccacggcgcccggcTGAGATTTTCATAATGTGTTTGAGACATGCTGTTTATTTCTtc--tttttttaacttttaattgaaatattgtatacatagcaaaaagtcattcctatcataaatgtgcagctcaatgaattttcatgaaATTTAATCATTAACCAGATTGAAATGAAAACCACAGCAAAACCCGTGACTGGAAGCCATCTCCGATAAGTCTTCTGTGGCCGGCTTCCTGTGGTGAGCCTCCCCATCAAGGGTAACTGCAGTCTCCTTGGAAATAAAGGAGATCAGGACTCcttttgtgtgagcttcatttactctgttttgcgagattggcccacattgtcgcatgtgtttaaggatctgtccttcccgcggggacatagcgtgccggggctgaaatgtcctagaatctgttcacaggttctactgtcagtgagggtttgggtggttacggctttgggaggtgatgaaagtgctgcttt-------cctgtgagtgtctttggggagcacacacgctcttttctgctggatattctccacccaaggggtcgctggtcatcacagatgtgcttgtccactttcagcagctactgactgagagtttcccaggtggagcatgcaccggatgtcatgccagctgaggaagac i panPan2.chrUn_NW_014024182v1 I 172 C 0 s gorGor5.CYUI01000356v1 80045 1574 + 152767 TGAGTCAGCACTTATTAGGTTCCACGTGCACATGGTCAAGTTTTCCTGTGGTTTTTCTCAGAAAGGAGCCATGATCCtgcaacagtgaaacaggaaaagtgctaacaaaactgactccatttttatttaatgggctttttctcatccctgcatataagctagcataattttagagcgctaagataaaacgcaaaagcggtaatcatgtagtttttgcaactaactgtgggattaatggaaagtatgtaaacagctaactgtgatttgttaaagatttataggagcattgtgatctgaccaaggagaaagaaggt-ccagccttctgggaccattgctggcacctggatgtgtgaggtagtcaggtacctgttgatcccaaccctctcctcttccactctcccttgaaccagataagcgcttgTCAGTGCTGTTTTGGGAGTATTCTGCCCTGTGGTTAAATAGGTGTGAGTGCTGGAGAGTCCTGCAGCAATCTGGGGCTTTCTGGTGCTGTGAAGACAGTTACTCTAAAAGTCCTGATGCCATCTCTGCACTTGGGTACAGTCGTGTGACTCTGGGTTTATGACAGATCCTTCAACTACCCTACCTGCCACTCTATATCTGCTGAGATTTTCTTTCTTTCttctttcgtttttgtttttgttttgttctgggacggaatctcgctctgttgccaggctggagtgcagtagcatgatctcagctcactataacctctgtctccagggttcaagtgattctcctgcctcagcctcccgagtagctgggattacaggcacccaccaccacatctagctaatttttgtatttttagtagacacagggttttaccatgttggccaggatga-tctcgatctcttcacctcatgatccgcccacctcggcctcccaaagtactgggattacaggtgtgagccaccgcgcccagcTGAGATTTTCATAATGTGTTTGAGACATGCTGTTTATTTCTtt--ttttttttacttttaactgaaatattgtatacatagcaaaaagtcattcctatcataaatgtacagctcaatgaattttcatg-aatgtaatcattaaccagattgaaatgaaaaccacaacaaaacccatgactggaagccatccccgataagtcttctgtggccagcttcctgtggtgagcctccccatcaagggtaacTGCAGCCTCCTTGGAAATAAAGGAGATCAGGACTCcttttgtgtgagcttcatttactctgttttgcgagattggcccacattgtcgcatgtgtttaaggatctgtccttcccgcggggacatagcgtgccagggctgaaatgtcctagaatctgttcacaggttctactgtcagtgagggtttgggtggttacggctttgggaggtgatgaaagtgctgcttt-------cctgtgagtgtctttggggagcacacacgctcttttctgccagatattatccacccaaggggtcgccggtcatcacagatgtgcttgtccactttcagcagctactgac--agagtttcccaggtggagcgtgcaccggatatcacgccagctgaggaagac i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160325121 1570 - 163208435 TGAGTCAGCACTTATTAGGTTCCACATACTCATGGTCAAGTTTTCCTGTGGTTTTTCTCA-AAAGGAGCCATGATCCtataacagtgaaatagcaaaagtactaacaaaactgactccgtttttatttaatgggctttttctcatccctgcatataagctagcataattttagagcactaagataaaacgcaaaagcagtaatcatgtagtttttgcaactgactgtgagattaatggaaagcatgtaaacagctaactgtggtttgttaaagatttataggagcattgtgatctggccaaggagaaagaaggtcccagcctcctgggaccattgctgacacctagatgtgtgagatagtcaggtacctcttgatcccaaccctctcctcttccgctctcccttgaaccgaataagtgcttgTCAGTGCTGCTTTGGGAGTCTTCTGCCCTGTGATTAAATAGGTGTGAGTGCCGGAGACGCCTGCAACAATCTGGGGCTTTCTGGTGCTGTGAAGACAGTTACTCTAAAAGTCCTGATGCCATCTCTGCACTTGGGTACAGTCGTGTGACTCTGGGTTTGTGACAGATCCATCAACTACCCTACCTGCCACTCCATATCTGCTGCGATtttctttatttcttcttttgtttttgt-----------tttgggatggaatcttgctctgttgccaggctggagtgcagtagcatgatctcagctcactataacctctgtctccagggttcaagcgattctcctgcctcaccctcccgagtagctgggattacaggcgcccaccatcacatctagctaatttttgtatttttagtagagacagggtttcaccatgttggccaggatgg-tcttgatctcttcacctcatgatctgcccgcctcagcctcccaaagtactgggattacaggtgtgagccaccgcgcctggcTGAGATTTTCATAATGTGTTTGACATATGCTGTTTATTTCTTC--ttttttttacttttaattgaaatattatatacatagcaaaaagtcattcctttcataaatgtacagctcaatgaattttcatgaaatttaatcattaaccagattgaaatgaaaaccacaacaaaacccatgactggaagccattcccgataagtcttctgtggccggcttcctgtggcgagcctccccatcaagggcaacTGCAGCCCCCTTGGAATTAAAGGAGATCA-GACTCcttttgtgtgagcttcattta--cggttttgcgagactggcccacattgtcgcacgtgtttaaggatctgtccttcccgcggggacatagcatgccggggctgaaatgtcctagaatctgttcacaggttctactgtcagtgagggcttgggtggttacagctttgggaggtgatgaaagtgctgctgtgcacacacctgtgagtgtctttggggaacacatgtgcacttttctatcggatattctccacccaaggggttaccagtcatcgcagatgtgcttgtccactttcagcagctactgactgacgatttcccaggtgaagcgtgcaccagatgtcatgcccgctgaggaagag i nomLeu3.chr2 C 0 C 0 e cerAty1.NW_012001120v1 3540898 1639 - 3647740 I e macNem1.NW_012020287v1 3816971 1424 + 4899514 I e rheMac8.chr6 3608438 1407 - 180051392 I e macFas5.chr6 3795148 1399 - 181584905 I e colAng1.NW_012117422v1 121168 1454 - 815015 I e manLeu1.NW_012103876v1 1639197 1419 - 1768974 I e chlSab2.chr23 79675921 1420 + 82825804 I a score=29179.000000 s hg38.chr5_KI270795v1_alt 101919 12 + 131892 agtttggttgct s panTro5.chr5 3426973 12 - 181907262 agtttggttgct i panTro5.chr5 C 0 C 0 s panPan2.chrUn_NW_014024182v1 8054 12 - 22698 agtttggttgct i panPan2.chrUn_NW_014024182v1 C 0 C 0 s gorGor5.CYUI01000356v1 81619 12 + 152767 agtttggttgct i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160326691 12 - 163208435 agctcggttgct i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3609845 12 - 180051392 agttcggttgct i rheMac8.chr6 I 1407 C 0 s macFas5.chr6 3796547 12 - 181584905 agttcggttgct i macFas5.chr6 I 1399 C 0 s manLeu1.NW_012103876v1 1640616 12 - 1768974 aGtttggttgct i manLeu1.NW_012103876v1 I 1419 I 2 e cerAty1.NW_012001120v1 3540898 1639 - 3647740 I e macNem1.NW_012020287v1 3816971 1424 + 4899514 I e colAng1.NW_012117422v1 121168 1454 - 815015 I e chlSab2.chr23 79675921 1420 + 82825804 I a score=16500.000000 s hg38.chr5_KI270795v1_alt 101931 3 + 131892 ccc s panTro5.chr5 3426985 3 - 181907262 ccc i panTro5.chr5 C 0 C 0 s panPan2.chrUn_NW_014024182v1 8066 3 - 22698 ccc i panPan2.chrUn_NW_014024182v1 C 0 C 0 s gorGor5.CYUI01000356v1 81631 3 + 152767 ccc i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160326703 3 - 163208435 ccc i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3609857 3 - 180051392 ccc i rheMac8.chr6 C 0 I 2 s macFas5.chr6 3796559 3 - 181584905 ccc i macFas5.chr6 C 0 I 2 s cerAty1.NW_012001120v1 3542537 3 - 3647740 ccc i cerAty1.NW_012001120v1 I 1639 C 0 s chlSab2.chr23 79677341 3 + 82825804 ccc i chlSab2.chr23 I 1420 C 0 s manLeu1.NW_012103876v1 1640630 3 - 1768974 ccc i manLeu1.NW_012103876v1 I 2 C 0 s colAng1.NW_012117422v1 122622 3 - 815015 ccc i colAng1.NW_012117422v1 I 1454 C 0 e macNem1.NW_012020287v1 3816971 1424 + 4899514 I a score=1991761.000000 s hg38.chr5_KI270795v1_alt 101934 362 + 131892 cagcctctccaacaattggtattttctgatgtcttcattctggccatgctgagggatgCATTAAAAGCACATAGAAAGTCCAGATGCCTCTGGGCAGCTCACAGATTCTGAATGTTGGGAGACAAGGACAACTGTCAATCTCTGTCAGTGCTAGGACTGATTCTCAGTATCTGACCCAAAACTAGGAACTGAGGCGATGGTTTGTGGTATTCGATAACGTTGTCAGCATATGCCCTAGAAGTGCTCAAATCCTGGCACATACACAACCTAGGGACGGGACAAACGTGAACTCGGCATGGTCGGTTATAGCTTGCGTCTAGCACCTTG-TTTTTGCAACTCTCATGTCCAGCTGGGGTGGGGCC s panTro5.chr5 3426988 362 - 181907262 cagcctctccaacaattggtattttctgatgtcttcattctggccaggctgagggatgCATTAAAAGCACATAGAAAGTCCAGATGCCTCTGAGCAGCTCATAGATTCTGAATGTTGGGAGACAAGGACAGCTGTCAATCTCTTTCAGTGCTAGGATTGATTGTCAGTATCTGACCCAAAACTAGGAATTGAGGCGACGGTTTGTGGTATTCGATAACGTTGTCAGCATAAGCCCTAGAAGTGCTCAAATCCTGGCACATACACAACCTAGGGACGGGACAAACGTGAACTCGGCATGGTCGGTTGTAGCTTGCGTCTAGCACCTTG-TTTTTGCAACTCTCATGTCCAGCTGGGGTGGGGCC i panTro5.chr5 C 0 C 0 s panPan2.chrUn_NW_014024182v1 8069 362 - 22698 cagcctctccaacaattggtattttctgatgtcttcattctggccaggctgagggatgCATTAAAAGCACATAGAAAGTCCAGATGCCTCTGAGCAGCTCATAGATTCTGAATGTTGGGAGACAAGGACAGCTGTCAATCTCTTTCAGTGCTAGGATTGATTGTCAGTATCTGACCCAAAACTAGGAATTGAGGCGACGGTTTGTGGTATTCGATGACATTGTCAGCATAAGCCCTAGAAGTGCTCAAATCCTGGCACATACACAACCTAGGGACGGGACAAACGTGAACTCGGCATGGTCGGTTGTAGCTTGCGTCTAGCACCTTG-TTTTTGCAACTCTCATGTCCAGCTGGGGTGGGGCC i panPan2.chrUn_NW_014024182v1 C 0 C 0 s gorGor5.CYUI01000356v1 81634 362 + 152767 cagcctctccaacaattggtattttctgatgtcttcattctggccatgctgagggatgcattaaaaGCACATAGAAAGTCCAGTTG-CTCTGGGCAGCTCATAGATTCTGAATGTTGGGAGACAAGGACAACTGTCAATCTCTGTCAGTGCTAGGACTGATTCTCAGTATCTGACCCAAAACTAGGAACTGAGGCGACAGTTTGTGGTATTCGATAACGTTGTCAGCATATGCCCTAGAAGTGCTCAAATCCTGGCACATACACAACCTAGGGGCGGGACAAACGTGAACTCGGCATGGTCGGTTATAGCTTGCGTCTAGCACCTTGTTTTTTGCAACTCTCATGTCCAGCTGGGGTGGGGCC i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160326706 362 - 163208435 caccctctccaacaattgatattttctgatgtcttcattctggccatgctgagggatgCATTAAAAGCACACAGAAAGTCCAGATGCCTCTGGGCAGCTCATAGATTCTGAATGTTGGGAGACAAGGACAACTGTCAATCTCTGTCAGTGCTAGAACTGATTCTCAGTATCTGACCGAAAACTAGGAACTGAGGCGATGGTTTGTGGTATTTGGTAACGTTGTCAGCATATGCCCTAGAAGTGCTCAAATCCTGGCACACACACACCCTAGGGACGGGACACACGTGAACTCGGCACGATCGGTTATAGCTTGTGTGTAGCACATTG-TTGTTGCATCTCTCATGTCCAGCTGGGGTGGGGCC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3609862 354 - 180051392 cagcctctccaacaattggtattttctgatgttttcattctggccatgctgagggatgCATTAAAAGCGCATAGAAAGTCCAGATGCCCCTGGGCAGCCCATAGATTCTGAATGTTTGGAGACAAGGACGACTGTCAACCTCTGTCAATGGTAGAACTGATTCTCAGTGTCTGACCCGGAGCTAGGAACTGAGGTGAC--------GTATTCGATAGCATTGTCAGCATATGCCCTAGAAGTGCTCAGATCCTGGGACATACACAACCTAGGGATGGGACAAACGTGGACTCAGCACGGTCGGTTATCGCTTGCGTCTAGCACCTTG-TTTCTGCAACCCTCACGTTCAGCCAGGGTAGGGCC i rheMac8.chr6 I 2 C 0 s macFas5.chr6 3796564 354 - 181584905 cagcctctccaacaattggtattttctgatgttttcattctggccatgctgagggatgCATTAAAAGCGCATAGAAAGTCCAGATGCCTCTGGGCAGCCCATAGATTCTGAATGTTTGGAGACAAGGACAACTGTCAACCTCTGTCAATGGTAGAACTGATTCTCAGTGTCTGACCCGGAGCTAGGAACTGAGGTGAC--------GTATTCGATAGCATTGTCAGCATATGCCCTAGAAGTGCTCAAATCCTGGGACATACACAACCTAGGGATGGGACAAACGTGGACTCAGCACGGTCGGTTATAGCTTGCGTCTAGCACCTTG-TTTCTGCAACCCTCACGTTCAGCTAGGGTAGGGCC i macFas5.chr6 I 2 C 0 s macNem1.NW_012020287v1 3818395 354 + 4899514 cagcctctccaacaattggtattttctgatgttttcattctggccatgctgagggatgCATTAAAAGCGCATAGAAAGTCCAGATGCCTCTGGGCAGCCCATAGATTCTGAATGTTTGGAGACAAGGACAACTGTCAACCTCTGTCAACGGTAGAACTGATTCTCAGTGTCTGACCCGGAGCTAGGAACTGAGGTGAC--------GTATTCGATAGCATTGTCAGCATATGCCCTAGAAGTGCTCAAATCCTGGGACATACACAACCTAGGGATGGGACAAACGTGGACTCAGCACGGTCGGTTATAGCTTGCGTCTAGCACCTTG-TTTCTGCAACCCTCACGTTCAGCTAGGGTAGGGCC i macNem1.NW_012020287v1 I 1424 C 0 s cerAty1.NW_012001120v1 3542540 362 - 3647740 cagcctctccaacaattggtattttctgatgttttcattctggccatgctgagggatgCATTAAAAGCACATAGAAAGTCCAGATGCCTCTGGGCAGCCCATAGATTCTGAATGTTTGGAGACAAGGACAACTGTCAACGTCTGTCAATGGTAGAACTGATTCTCAGTGTCTGACCCGGAGCTAGGAACTGAGGCGATGGTTTGTGGTATTCGATAGCATTGTCAGCGTATGCCCTAGAAGTGCTCAAATCCTGGGACATACACAACCTAGGGATGGGACAAACGTGGACTCAGCACGGTCGGTTATAGCTTGCGTCTAGCACCTTG-TTTCTGCAACCCTCACATTCAGCTAGGGTAGGGCC i cerAty1.NW_012001120v1 C 0 I 303 s chlSab2.chr23 79677344 362 + 82825804 cagcctctccaacaattggtattttctgatgttttcattctggccatgctgagggatgCATTAAAAGCACATAGAAAGTCCAGATGCCTCTGGACAGTCCATAGATTCTGAATGTTTGGAGACAAGGACAACTGTCAACATCTGTCAATGGTAGAACTGATTCTCAGTGTCTGACCCGAAACTAGGAACTGAGGCAATGGTTTGTGGTATTCGATAGCATTGTCAGCGTATGCCCCAGAAGTGCTCAAATCCTGGGACATACACAACCTAGGGATGGGACAAACATGGACTCAGCACGGTCGGTTATAGCCTGCGTCTAGCACCTTG-TTTCTGCAACTCTCACGTTCAGCTAGGGTAGGGCC i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1640633 362 - 1768974 cagcctctccaacaattggtattttctgatgttttcattctggccatgctgagggatgCATTAAAAGCACATAGGAAGTCCAGATGCCTCTGGGCAGCCCATAGATTCTGAATGTTTGGAGACAAGGACAACTATCAACGTCTGTCAATGGTAGAACTGATTCTCAGTGTCTGACCCGGAGCTAGGAACTGAGGCGATGGTTTGTGGTATTCGATAGCATTGTCAGCGTATGCCCTAGAAGTGCTCAAATCCTGGGACATACACAACCTAGGGATGGGACAAACGTGGACTCAGCACGGTCAGTTATAGCTTGCGTCTAGCACCTTG-TTTCTGCAACTCTCACGTTCAGCTAGGGTAGGGCC i manLeu1.NW_012103876v1 C 0 C 0 s colAng1.NW_012117422v1 122625 361 - 815015 cagcctctccaacaattggtattttctgatattctcattctggccatgctgagggatgCATTAAAAGCACATAGAAAGTCCAGATGCCTCTGGGCAGCCCATAGATTCTGAATGTTTGGAGACAAGGACAACTGTCAACCTCTGTCAATGGTAGAACTGATTCTCAGTGTCTGACCCAGAACTAGGAACTGAGGCGATGGTTTGTGGTATTCGATAGCATTGTCAGCATATGCCCTAGAAGTGCTCAAATCCTGGGACATACACAACCTAGGGAT-GGACAAACGTGGACTCAGCATGGTTGGTTATAGCTTGCGTCTAGCACCTTG-TTTCTGCAACCCTCACGTTCAGCTAGGGTAGGGCC i colAng1.NW_012117422v1 C 0 C 0 a score=39574.000000 s hg38.chr5_KI270795v1_alt 102296 11 + 131892 ATGCACGGGCA s panTro5.chr5 3427350 11 - 181907262 ATGCACAGGCA i panTro5.chr5 C 0 C 0 s panPan2.chrUn_NW_014024182v1 8431 11 - 22698 ATGCACGGGCA i panPan2.chrUn_NW_014024182v1 C 0 C 0 s gorGor5.CYUI01000356v1 81996 11 + 152767 ATGCATGGGCA i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160327068 11 - 163208435 GTGCACGGGCA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3610216 11 - 180051392 CTGAATGAGCA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3796918 11 - 181584905 ATGAATGAGCA i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3818749 11 + 4899514 ATGAATGAGCA i macNem1.NW_012020287v1 C 0 C 0 s chlSab2.chr23 79677706 11 + 82825804 ATGAATGAGCA i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1640995 11 - 1768974 ATGAATGAGCA i manLeu1.NW_012103876v1 C 0 C 0 s colAng1.NW_012117422v1 122986 11 - 815015 ATGAATGAGCA i colAng1.NW_012117422v1 C 0 C 0 e cerAty1.NW_012001120v1 3542902 303 - 3647740 I a score=65993.000000 s hg38.chr5_KI270795v1_alt 102307 15 + 131892 GCATCCCGATGTCCC s panTro5.chr5 3427361 15 - 181907262 GCATCCCGATGTCCC i panTro5.chr5 C 0 C 0 s panPan2.chrUn_NW_014024182v1 8442 15 - 22698 GCATCCCGATGTCCC i panPan2.chrUn_NW_014024182v1 C 0 C 0 s gorGor5.CYUI01000356v1 82007 15 + 152767 GCATCCCGATGTCCC i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160327079 15 - 163208435 GCATCGCGATGTCCC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3610227 15 - 180051392 GCACCCCGGCTTCTC i rheMac8.chr6 C 0 I 1 s macFas5.chr6 3796929 15 - 181584905 GCACCCCGGCTTCTC i macFas5.chr6 C 0 I 299 s macNem1.NW_012020287v1 3818760 15 + 4899514 GCACCCCGGCTTCTC i macNem1.NW_012020287v1 C 0 I 299 s cerAty1.NW_012001120v1 3543205 15 - 3647740 GCACCCCGATGTCCT i cerAty1.NW_012001120v1 I 303 I 1 s chlSab2.chr23 79677717 15 + 82825804 ACACCCCGGCTTCCC i chlSab2.chr23 C 0 I 222 s manLeu1.NW_012103876v1 1641006 15 - 1768974 GCACCCCGGCTTCTC i manLeu1.NW_012103876v1 C 0 I 222 s colAng1.NW_012117422v1 122997 15 - 815015 GCACCCCGGCTTCCC i colAng1.NW_012117422v1 C 0 I 1 a score=180373.000000 s hg38.chr5_KI270795v1_alt 102322 34 + 131892 ACCACCGCCCCGTCCACCCAGCTCCTCCAGAGGA s panTro5.chr5 3427376 34 - 181907262 ACCACCGCCCCGTCCACCCAGCTCCTCCAGAGGA i panTro5.chr5 C 0 C 0 s panPan2.chrUn_NW_014024182v1 8457 34 - 22698 ACCACCGCCCCGTCCACCCAGCTCCTCCAGAGGA i panPan2.chrUn_NW_014024182v1 C 0 C 0 s gorGor5.CYUI01000356v1 82022 34 + 152767 ACCATCACCCCGTCTACCCAGCTCCTCCAGAGGA i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160327094 34 - 163208435 ACCATCGCCCCATCCACCCAGCTCCTCCAGAGAA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3610243 34 - 180051392 ACCATCGCCCCGTCCACGCGGCTCCTCCGGAGGA i rheMac8.chr6 I 1 I 311 s macFas5.chr6 3797243 34 - 181584905 ACCATCGCCCCGTCCACGCAGCTCCTGCGGAGAA i macFas5.chr6 I 299 C 0 s macNem1.NW_012020287v1 3819074 34 + 4899514 ACCATCGCCCCGTCCACGCAGCTCCTGCGGAGAA i macNem1.NW_012020287v1 I 299 C 0 s cerAty1.NW_012001120v1 3543221 34 - 3647740 ACCATCGCCCCGTCCACGCAGCTCCTCCGGAGAA i cerAty1.NW_012001120v1 I 1 C 0 s chlSab2.chr23 79677954 34 + 82825804 ACCATCGCTCCGTCCACCCAGCTCCTCCGGAGAA i chlSab2.chr23 I 222 C 0 s manLeu1.NW_012103876v1 1641243 34 - 1768974 ACCATCGCCCCGTCCATGCAGCTCCTCCGGAGAA i manLeu1.NW_012103876v1 I 222 C 0 s colAng1.NW_012117422v1 123013 34 - 815015 ATCATCGCCCCGTCCACGCGGCTCCTCCAAAGGA i colAng1.NW_012117422v1 I 1 C 0 a score=31383.000000 s hg38.chr5_KI270795v1_alt 102356 13 + 131892 TGAATTACAGTGG s panTro5.chr5 3427410 13 - 181907262 TGAGTTACAGTGG i panTro5.chr5 C 0 C 0 s panPan2.chrUn_NW_014024182v1 8491 13 - 22698 TGAGTTACAGTGG i panPan2.chrUn_NW_014024182v1 C 0 C 0 s gorGor5.CYUI01000356v1 82056 13 + 152767 TGAGTTACAGTGG i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160327128 13 - 163208435 TGAGTTACAGTGG i nomLeu3.chr2 C 0 C 0 s macFas5.chr6 3797277 13 - 181584905 CAAGTTCGAGGAA i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3819108 13 + 4899514 CAAGTTCGAGGAA i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012001120v1 3543255 13 - 3647740 CAAGTTTGAGGAG i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79677988 13 + 82825804 CAAGTTCGAGGAG i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1641277 13 - 1768974 CAAGTTCGAGGAG i manLeu1.NW_012103876v1 C 0 C 0 s colAng1.NW_012117422v1 123047 13 - 815015 CGAGTTCGGGCGG i colAng1.NW_012117422v1 C 0 C 0 e rheMac8.chr6 3610277 311 - 180051392 I a score=951648.000000 s hg38.chr5_KI270795v1_alt 102369 176 + 131892 CTTCCTAGTGGCAGGACAGATGAGGGGTCCCATCTAATGCCAGGTTAAGATTGTCTTTCTTTTTCTGAGGTAGAAGCGGTGCT---------------------------------------------------------------------------TTGCCGTTTTATCAATTGAGTTCAGTTATGGAAACGTGGCCACATACATTACAGAGGTTAGCGGCTGTTTCCTCAAGGGCTTGGGAAAGAA-GT s panTro5.chr5 3427423 176 - 181907262 CTTCCTAGTGGCAGGACAGATGAGGGGTCCCATCTAATGCCAGGTTAAGATTGTCTTTCTTTTTCTGAAGTAGAAGCGGTGCT---------------------------------------------------------------------------TTGCTGTTTTATCAATTGAGTTCAGTTATGAAAATGTGGCCACATACATTACAGAGGTTAGTGGCTGTTTCCTCAAGGGCTTGGGAAAGAA-GT i panTro5.chr5 C 0 C 0 s panPan2.chrUn_NW_014024182v1 8504 176 - 22698 CTTCCTAGTGGCAGGACAGATGAGGGGTCCCATCTAATGCCAGGTTAAGATTGTCTTTCTTTTTCTGAAGTAGAAGCGGTGCT---------------------------------------------------------------------------TTGCTGTTTTATCAATTGAGTTCAGTTATGAAAATGTGGCCACATACATTACAGAGGTTAGTGGCTGTTTCCTCAAGGGCTTGGGAAAGAA-GT i panPan2.chrUn_NW_014024182v1 C 0 C 0 s gorGor5.CYUI01000356v1 82069 176 + 152767 CTTCCTAGTGGCAGGACAGATGAGGGGTCCCATCTAATGCCAGGTTAAGATTGTCTTTCTTTTTCTGAGGTAGAAGCGGTGCT---------------------------------------------------------------------------TTGCTGTTTTATCAATTGAGTTCAGTTATGGAAACGTGGCCACATACATTACAGAGGTTAGTGGCTGTTTCCTCAAGGGCTTGGGAAAGAA-GT i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160327141 176 - 163208435 CTTTCTAGTGGCAGGACAGATGAGGGGTCCCATCTAATGCCAGGTTAAGATTGTCTTTCTTTTCCTGAGGTAGAAGCGGTGCT---------------------------------------------------------------------------TTGCTGTTTTATCAGTTGAGTTCAGTTATGAAAACGTGGCCACATACATTACAGAAGTTAGTGGCTATTTCCTCAAGGGCTTGGGAAAGAA-GT i nomLeu3.chr2 C 0 I 2136 s rheMac8.chr6 3610588 220 - 180051392 CTTCCTAGTGGCAGGACAGATCAGGGGTCCCATCTAATGACAGGTTAAGATTGTCTTTCTTTTTCTGAGGTAGAAGCGGTGCTTTGCTGTCTTATCAATTGAGTTCAGTTATGAAAACT---TGACTGCT----------------------------TTGCTGTTTTATCAGTTGAGTTCAGTTATGGAAACATGGCCACATGCATTACAGAGGTTAGTGGCTGTTTCTTCAGTTGCTTGGGATGGAA-GT i rheMac8.chr6 I 311 C 0 s macFas5.chr6 3797290 220 - 181584905 CTTCCTAGTGGCAGGACAGATCAGGGGTCCCATCTAATGACAGGTTAAGATTGTCTTTCTTTTTCTGAGGTAGAAGCGGTGCTTTGCTGTCTTATCAATTGAGTTCAGT-------------------------------TATGAAAACTTGACTGCTTTGCTGTTTTATCAGTTGAGTTCAGTTATGGAAACATGGCCACATGCATTACAGAGGTTAGTGGCTGTTTCTTCAGTTGCTTGGGATGGAA-GT i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3819121 221 + 4899514 CTTCCTAGGGGCAGGACAGATCAGGGGTCCCATCTAATGACAGGTTAAGATTGTCTTTCTTTTTCTGAGGTAGAAGCGGTGCTTTGCTGTCTTATCAATTGAGTTCAGT-----------------TGTGAAAACTTGACTGCT--------------TTGCTGTTTTATCAGTTGAGTTCAGTTATGGAAACATGGCCACATGCATTACAGAGGTTAGTGGCTGTTTCTTCAGTTGCTTGGGATGGAAGGT i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012001120v1 3543268 220 - 3647740 CTTCCTAGTAGCAGGACAGATCAGGGGTCCCATCTAATGCCAGGTTAAGATTGTCTTTCTTTTTCTGAGGTAGAAGCGGTGCTTTGCTGTCTTATCAATTGAGTTCAGT-------------------------------TATGAAAACTTGACCGCTTCGCTGTTTTATCAGTTGAGTTCAGTTATGGAAACGTGGCCACATGCATTACAGAGGTTAGTGGCTGTTTCTTCAGTTGCTTGGGATGGAA-GT i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79678001 220 + 82825804 CTTCCTAGTGGCAGGACAGATCAGGGGTCCCATCTAATGCCAGGTTAAGATTGTCTTTCTTTTTCTGAGGTAGAAGCGGTGCTTTGCTGTCTTATCAATTGAGTTCAGTTATGAAAACTTGAC-----------------TGCT--------------TTGCTGTTTTATCAGTTGAGTTCAGTTATGAAAACGTGGCCACATGCATTACAGAGGTCAGTGGCTGTTTCTTCAGTTGCTTGGGATGGAA-GT i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1641290 220 - 1768974 CTTCCTAGTGGCAGGACAGATCAGGGGTCCCATCTAATGCCAGGTTAAGATTGTCTTTCTTTTTCTGAGGTAGAAGCGGTGCTTTGCTGTCTTATCAATTGAGTTCAGTTATGAAAACTTGAC-----------------TGCT--------------TTGCTGTTTTATCAGTTGAGTTCAGTTATGGAAACATGGCCACATGCATTACAGAGGTCAGTGGCTGTTTCTTCAATTGCTTGGGATGGAA-GT i manLeu1.NW_012103876v1 C 0 C 0 s colAng1.NW_012117422v1 123060 216 - 815015 CGTCCTAGTGGCAGGACAGATCAGGGGTCCCATCTAATGCCAGGTTAAGATTG----TCTTTTTTTGAGGTAGAAGCGGTGTTTTGCTGTCTTATCAATTGAGTTCAGTTATGAAAACTTGAC-----------------CGCT--------------TTGCTGTTTTATCAATTGAGTTCAGTTGTGAAAACATGGCCACATGCATTACAGAGGTTAGTGGCTGTTTCTTCAGTTGCTTGGGATGGAA-GT i colAng1.NW_012117422v1 C 0 C 0 a score=4288385.000000 s hg38.chr5_KI270795v1_alt 102545 842 + 131892 CTCTTACCAAACGAGGCCTGATTCAGGAGGGCACATAAGCCGGG-TTGTGTCAGGTTCTTCACTGTGCATAGAGAGCCTTTTCCTCAGTAGCAATTATTTCCTCCGTGGGTTAATAATTTTGCAACTGCTGATTGAAATAAACATGACAggccgggcgtggtggcctataatcccagcacttgggaggcctaggcgagtggatcacctgaggtcaggagttcatgaccagcctcgtcaatatggcgaaatcccatctctact-aaaaatgccaaaattagccaggcgtcgtggcacatgcctgtaatcccagctacttgggaggctgaggcaagagaacttcttgaacccgggaggtggaggttgtagtgagccgagattgcaccactgcactccagtctggttgacggagactccacctcaaaaaacaaacaaacaaacaaaaaaaacaaAAAACAATAGACATGACAGACACATTCTCCAGCAAAAGTC--TGCCCTATGACAGGAGTAGGTTTTCTCTACCCTTGCTTTTAGATTCCTTTGACTTggccgggcacagtggctcacgcctgtaatcccagcactttgagaggccaaggtgggcagatca-tgaggccaggagatagagaccatcctgaccaacatggtgaaaccccgtctctgctaaaatacaaaaaattagctaggcgtggtggcacgtgcctgtagtcccagctatgcaggaggctgaggcagagaattcgcttgaacctggga-ggcgtaggttgcagtgagccaagatcacgccactgcactccagcctgggggacagagcaagactctgtctc------aaaaaaaaa-------------------------------aaaaaaaga s panTro5.chr5 3427599 843 - 181907262 CTCTTACCAAACGAAGCCTGATTCAGGAGGGCACATAAGCC-GG-TTGTGTCAGGTTCTTCACTGTGCATAGAGAGCCTTTTCCTCAGTAGCAATTATTTCCTCCATGGGTTAATAATTTTGCAACTGCTGATTGAAATAGACATGACAggccgggcgtggtggcctataatcccagcacttgggaggcctaggcgagtggatcacctgaggtcaggagttcatgaccagccttgtcaatatggcgaaatcccatctctact-aaaaatgccaaaattagccaggcgtggtggcacatgcctgtaatcccagctacttgggaggctgaggcaagagaacttcttgaacccgggaggtggaggttgtagtgagccgagattgcaccactgcactccagcctggttgacggagactccacacc------cccaccaaaaaaaaaaaaaaaaaaaaCCCAATAGACATGACAGACACATCCTCCAGCAAAAGTCTATGCCCTATGGCAGGAGTAGGTTTTCTCTACCCTTGCTTTTAGATTCCTTTGACTCggccgggcacagtggctcacgcctgtaatcccagcactttgagaggccaaggcaggcagatca-tgaggccaggagatagagaccatcctggccaacatggtgaaaccccgtctctgctaaaatacaaaaaattagctaggcgtggtggcacatgcctttagtcccagctatgcaggaggctgaggcaggggattcgcttgaacctggga-ggcgtaggttgcagtgagccaagatcatgccactgcactccagcctgggggacagagcaagactccatctcaaaaaaaaaaaaaaa-------------------------------aaaaaaaga i panTro5.chr5 C 0 C 0 s panPan2.chrUn_NW_014024182v1 8680 829 - 22698 CTCTTACCAAACGAAGCCTGATTCAGGAGGGCACATAAGCC-GG-TTGTGTCAGGTTCTTCACTGTGCATAGAGAGCCTTTTCCTCAGTAGCAATTATTTCCTCCATGGGTTAATAATTTTGCAACTGCTGATTGAAATAGACATGACAggccgggcgtggtggcctataatcccagcacttgggaggcctaggcgagtggatcacctgaggtcaggagttcatgaccagccttgtcaatatggcgaaatcccatctctact-aaaaatgccaaaattagccaggcgtggtggcacatgcctgtaatcccagctacttgggaggctgaggcaagagaacttcttgaacccgggaggtggaggttgtagtgagccgagattgcaccactgcactccagcctggttgacggagactccacccc------cccac--------aaaaaaaaaaaaaaCCAATAGACATGACAGACACATCCTCCAGCAAAAGTCTATGCCCTATGGCAGGAGTAGGTTTTCTCTACCCTTGCTTCTAGATTCCTTTGACTCggccgggcacagtggctcacgcctgtaatcccagcactttgagaggccaaggcggcagagtcagtgaggccaggagatagagaccatcctggccaacgtggtgaaaccctgtctctgctaaaatac-aaaaattagctaggcgtggtggcacatgcctttagtcccagctatgcaggaggctgtggcaggggattcgcttgaacctggga-ggcgtaggttgcagtgagccaagatcacgccactgcactccagcctgggggacagagcaagactccatctc------aaaaaaaaa-------------------------------acaaaaaga i panPan2.chrUn_NW_014024182v1 C 0 I 367 s gorGor5.CYUI01000356v1 82245 840 + 152767 CTCTTACCAAACGAGGCCTGATTCAGGAGGGCACATAAGCCGGG-TTGTGTCAGGTTCTTCACTGTGCATAGAGAGCCTTTTCCTCAGTAGCAATTATTTCCTCCATGGGTTAATAATTTTGCAACTGCTGATTGAAATAGACATGACAggccgggcgtggtggcctataatcccagcacttgggaggcctaggcgagtggatcacctgaggtcaggagttcatgaccagcctcgtcaatatggtaaaatcccatctctact-aaaaatgccaaaattagccaggcgtggtggcacatgcctgtaatcccagctacttgggaggctgaggcaagagaacttcttgaacccgggaggtggaggttgtagtgagccaagattgcaccactgcactccagtctggttgacggagactccacctcaaaaaaaaaac---aaaaacaaacaaacaaaaaACAATAGACATGACAGACACATCCTCCAGCAAAAGTCTGTGCCCTATGGCAGGAGTAGGTTTTCTCTACCCTTGCTTTTAGATTCCTTTGACTTggccgggcacagtggctcacgcctgtaatcccagcactttgagaggccaaggcgggcagatca-tgaggccaggagatagagaccatcctggccaacatggtggaaccccgtctctgctaaaatacaaaaaattagctaggcgtggtggcacgtgcctgtagtcccagctatgcaggaggctgaggcagggaatttgcttgaacctgggagggcgtaggttgcagtgagccaagatcacgccactgcactccagcctgggggacagagcaagactctgtctc------aaaaaaaaa-------------------------------aaaaaga-- i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160329453 829 - 163208435 CTCTTACCAGACGAGGCCTGATTCAGGAGGGCACATAAGCCGGG-TTGTGTCAGGTTCTTCACTGTGCATAGAGAGCCTTTTCCTCAGTAGCAATTATTTCCTCCGTGGCTTAATGATGTTGCAACTGCTGATtgaaatagacatgacaggccgggcgcggtggcctatgatcccagcacttgggaggcctaggtgagtggatcacctgaggtcaggagttcatgaccagcctcgtcaatatggcgaaatcccatctctact-aaaaatgccaaaattagccaggtgtggtggcacatgcctgtagtcccagctacttgggaggctgaggcaggagaacttcttgaacccgggaggtggaggttgtagtgagccaagactgcaccactgcacgccagcctgggggacagagactccatctc---------------aaaaaaaaaaaaaacaaaacaatagacatgacagacaCATCCTCCAGCAACAGTCTGTGCTCTATGGCAGGAGCAGGTTTTCTCTACCCTTGCTTTTAGATTCCTTTGACTTggctgggcgcagtggctcacgcctgtaatcccagcactttgagaggccaaggcgggcggatca-tgaggtcaggagatagagaccatccaggccaacatggtgaaactccgtctctgctaaaatacaaaaaattagctgggcgtggtggcacgtgcctgtagtcccagctatgcaggaggctgaggcaggggattcgcttgaatctggga-ggcgaaggttgcagtgagctgagatcacgccactgccctccagcctgggggacagagcaagactctgtctc------aaaaaaaaa-------------------------------aaaaaaaga i nomLeu3.chr2 I 2136 C 0 s rheMac8.chr6 3610808 819 - 180051392 CTCTTATCACACAAGCCCTGATTCGGGAGGGCACATTGGCC-GG--TGTGTCAGATTCTTCACTGTGCGTAGAGAGCCTTTTCCTCAGGAGCAATTCTTTCCTCCGTGGGTTAAGAATTTTGCAACTGCTGATTGAAGTAgacatgacaggccaggcatgaaggcctgtaatcccagcacttgggaggcctaggtgggtggatcacctgaggtcaggagttcgtgaccaggttggtcaacacggcgaaacccca--tctactaaaaaatgccaaaattagctgagcatggtggcacatgcctggaatcccagctacttgggaggctgaggcaggagaactgcttgaacccgggaggtggaggttgtagtggaccgagattgcatcactgcactccagcctggttgtcagagactccat---------------------------caaaaaaaaaaaaaagacatgacagacatATCCTCCAGCAAAAGTCTGTGCCCTGTGGCAGGAGTAGGTTTTCTCTACCCTAGCTTTTAGATTCCTTTGACTTggccaggcagggtggctcacgcctgtaaacccagcactttgagaggccaaggcgggcaaatca-caaggtcaggagatagagaccatcctggccaacatggtgaaacctcgtctctactaaaatacagaaaattaactgggcatggtggcaggtgcctgtagtcccagctatgcaggaggctgaggaaggggattcgcttgaacccggga-ggcggagcttgcagtgagcccagatggcgccactgcactccagcct-ggcgacagagcaagattccgtctc------aaaaaaaaaaaaaaa-------------------------aaaagaaaa i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3797510 820 - 181584905 CTCTTATCACACAAGCCCTGATTCGGGAGGGCACATTGGCC-GG--TGTGTCAGATTCTTCACTGTGCGTAGAGAGCCTTTTCCTCAGGAGCAATTCTTTCCTCCGTGGGTTAAGAATTTTGCAACTGCTGATTGAAGTAgacatgacaggccaggcatgaaggcctgtaatcccagcacttgggaggcctaggtgggtggatcacctgaggtcaggagttcgtgaccaggttggtcaacacggcgaaacccca--tctact-aaaaatgccaaaattagctgagcatggtggcacatgcctggaatcccagctacttgggaggctgaggcaggagaactgcttgaacccgggaggtggaggttgtagtgaaccgagattgcatcactgcactccagcctggttgtcagagactccat---------------------------caaaaaaaaaaaaaagacatgacagacaCATCCTCCAGCAAAAGTCTGTGCCCTGTGGCAGGAGTAGGTTTTCTCTACCCTAGCTTTTAGATTCCTTTGACTTggccaggcagggtggctcacgcctgtaaacccagcactttgagaggccaaggcgggcaaatca-caaggtcaggagatagagaccatcctggccaacatggtgaaacctcgtctctactaaaatacagaaaattaactgggcgtggtggcaggtgcctgtagtcccagctatgcaggaggctgaggaaggggattcgcttgaacccggga-ggcggagcttgcagtgagcccagatggcgccactgcactccagcct-ggcgacagagcaagattccgtctc------aaaaaaaaaaaaaaaag-----------------------aaaagaaaa i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3819342 814 + 4899514 CTCTTACCACACAAGCCCTGATTCGGGAGGGCACATTGGCC-GG--TGTGTCAGATTCTTCACTGTGCGTAGAGAGCCTTTTCCTCAGGAGCAATTCTTTCCTCCGTGGGTTAAGAATTTTGCAACTGCTGATTGAAGTAGACATGACAggccaggcatgatggcctgtaatcccagcacttgggaggcctaggtgggtggatcacctgaggtcaggagttcgtgaccaggttggtcaacacggcgaaacccca--tctact-aaaaatgccaaaattagctgagcatggtggcacatgcctggaatcccagctacttgggaggctgaggcaggagaactgcttgaacccgggaggtggaggttgtagtgaaccgagattgcatcactgcactccagcctggttgtcagagactccat-------------------------aaaaaaaaaaaaaaaaaGACATGACAGACACATCCTCCAGCAAAAGTCTGTGCCCTGTGGCAGGAGTAGGTTTTCTCTACCCTAGCTTTTAGATTCCTTTGACTTggccaggcagggtggctcacgcctgtaaacccagcactttgagaggccaaggcgggcaaatca-caaggtcaggagatagagaccatcctggccaacatggtgaaacctcgtctctactaaaatacagaaaattaactgggcatggtggcaggtgcctgtagtcccagctatgcaggaggctgaggaaggggattcgcttgaaccaggga-ggcggagcttgcagtgagcccagatggcgccactgcactccagcct-ggcgacagagcaagattccgtctc------aaaaaaaaa-------------------------------aaaagaaaa i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012001120v1 3543488 819 - 3647740 CTCTTACCACACGAGGCCTGATTCGGGAGGGCACATAGGCC-GG-ATGTGTCAGATTCTTCACTGTGCGTAGAGAGCCTTTTCCTCAGGAGCAATTCTTTCCTCCGTGGGTTAAGAATTTTGCAACTGCTGATTGAAGTAGACATGACAggccaggcatgatggcctgtaatcccagcacttgggaggcctaggcaagtggatcacctgaggtcaggagttcgtgaccaggttggtcaacacggcaaaacccca--tctact-aaaaatgccaaaattagctgggcatggtggcacatgcctggaatcccagctacttgggaggctgaggcaggagaactgcttgaacccgggaggtggaggttgtagtgaacggagattgcatcactgcactccagcttggttgtcagagactccat-------------------caaaaaaaaaaaaaaaaaaaaaaGACATGACAGACACATCCTCCAGCAAAAGTCTGTGCCCTGTGGCAGGAGTAGGTTTTCTCTACCCTAGCTTTTAGATTCCTTTGACTTggccaggcagggtggctcacgcctgtaaacccagcactttgggaggccaaggcgggcaaatca-caaggtcaggaggtagagaccatcctggccaacatggtgaaaccccgtctctactaaaatacagaaaattaactgggcgtggtggcaggtgcctgtagtcccagctatgcaggaggctgaggaaggggattcgcttgaactcggga-ggcggagcttgccgtgagcccagatggcgccactgcactccagcct-ggcgacagagcaagattctgtctc------aaaaaaa---------------------------------aaaaagaaa i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79678221 828 + 82825804 CTCTTACCACATGAGGCCTGATTCAGGAGGGCACATAGGCT-GG-GTGTGTCAGATTCTTCACTGTGCGCAGAGAGCCTTTTCCTCAGGAGCAATTCTTTCCTCCGTGGGTTAAGAATTTTGCAACTGCTAATTGAAGTAGACATGACAggccaggcatgatggcctgtaatcccagcacttgggaggc---------tggatcacctgaagtcaggagttcgtgaccaggttggtcaacgtggcgaaaccccatctctact-aaaaatgccagaattagctaggcgtagtggcacatgcctgtaatcccagctacttgggaggctgaggcaggagaactgcttgaacccgggaggtggaggttgtagtgaaccgagattgcaccactgcactccagtctggttgtcagagactccat-----------------aaaaaaaaaaaaaaaaaaaaaaaaaGACATGACAGACACATCCTCCAGGAAAAGCCTGTGCCCTATGGCAGGAGTAGGTTTTCTCTACCCTTGCTTTTAGATTTCTTTGACTTggccaggcaggatgactcacacctgtaaacccagcactttgggaggccaaggtgggcaaatca-caaggtcaggagatagagaccatcctggccaacatggtgaaaccccgtctctactaaaatacagaaaattaactgggcatggtggcaggtgcctgtagtcccagctatgcaggaggctgaggaaggggattcgcttgaacccggga-ggcagagcttgcagtgagcccagatggcaccact--------------------gagccagattctgtctc------aaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaagaaaagaaaa i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1641510 823 - 1768974 CTCTTACCACACAAGCCCTGATTCGGGAGGGCACATTGGCG-GG-GTGTGTCAGATTCTTCACTGTGCGTAGAGAGCCTTTTCCTCAGGAGCAATTCTTTCCTCCGTGGGTTAAGAATTTTGCAACTGCTGATTGAAGTAGACATGACAggccaggcatgatggcctgtaatcccagcacttgggaggcctaggcgggtggatcacctgaggtcaggaattcgtgaccaggttggtcaacatggcgaaaccacatctctact-aaaaatgccaaaattagctgggcatggtggcacatgcctggaatcccagctacttgggaagctgaggcaggagaactgcttgaacccgggaggtggaggttgtagtgaaccgagattgcatcactgcactccagcctggttgtc-gagactccat---------------------caaaaaaaaaaaaaaaaaaaaGACACGACAGACACATCCTCCAGCAAAAGTCTGTGCCCTGTGGCAGGAGTAGGTTTTCTCTACCCTAGCTTTTAGATTCCTTTGACTTggccaggcaggatgactcacacctgtaaacccagctctttgggaggccaaggcgggcaaatca-caaggtcaggaggtagagaccatcctggccaacatggtgaaaccctgtctctactaaaatacagaaaattaactgggcatggtggcaggtgcctgtagtcccagctatgcaggaagctgaggaaggggattcgcttgaacccggga-ggtggagcttgcagtgagcccagatggcgccactgcactccagcct-ggcgacagagcaacattccgtctc------aaaaaaaaaaaa----------------------------aaaagaaaa i manLeu1.NW_012103876v1 C 0 C 0 s colAng1.NW_012117422v1 123276 817 - 815015 CTCTTACCACAGGGGGCCTGATTCAGGAGGGCACATAGGCT-GGGGTGTGTCAGATTCTTCACTGTGCAGAGAGAGCCTTTTCCTCAGTAGCAATTATTTCCTCCGTGGGTTAATAATTTTGCAACTGCTGATTGAAGCAGACATGGCAggccgggcatgatggcctgtaatcccagcacttgggaggc-taggcaggtggatcacctgaggtcaggagttcgtgaccagcttggtcaa--tggcgaaaccctatctctact-aaaaatgccaaaattagctgggcgtggtggcacatgcctgtaatcccagctacttgggaggctgaggcaggaggactgcttgaacccgggaggtggagattgtagtgaaccgagactgcaccactgcactccagcctggttgtcagagactccat----------------------caaaaaaaaaaaaaaaaaaaGACATGACAGACACATCCTCCAGCAAAAGTCTGTGCCATATGGCAAGAGTAGGTTTTCTCTACCCTAGCTTTTAGATTCCTTTGACTTggccaggcaggatgattcacacctgtaaacccagcactttgggaggccaaggcgggcaaatca-caaggtcaggagatagagaccatcctggccaacatggtgaaaccctgtctgtactaaactatagaaaattaactgggcatggtggcaggtgcctgtagtcccagctatgcaggaggctgaggaagaggattcgcttgaacctggga-ggcggagcttgcagtgagcccagatggtgccactgcactccagcct-ggcaacagagcaagattccgtctc------aaaaaaaa--------------------------------aaaaaaaaa i colAng1.NW_012117422v1 C 0 C 0 a score=23394.000000 s hg38.chr5_KI270795v1_alt 103387 7 + 131892 aaaaaga s panTro5.chr5 3428442 7 - 181907262 aaaaaga i panTro5.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 83085 7 + 152767 aaaaaga i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160330282 5 - 163208435 aaaaa-- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3611627 7 - 180051392 gaaaaga i rheMac8.chr6 C 0 I 4 s macFas5.chr6 3798330 7 - 181584905 gaaaaga i macFas5.chr6 C 0 I 4 s macNem1.NW_012020287v1 3820156 7 + 4899514 gaaaaga i macNem1.NW_012020287v1 C 0 I 4 s cerAty1.NW_012001120v1 3544307 7 - 3647740 gaaagaa i cerAty1.NW_012001120v1 C 0 I 4 s chlSab2.chr23 79679049 7 + 82825804 gaaaaga i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1642333 7 - 1768974 gaaaaga i manLeu1.NW_012103876v1 C 0 C 0 s colAng1.NW_012117422v1 124093 7 - 815015 gaaaaga i colAng1.NW_012117422v1 C 0 I 4 e panPan2.chrUn_NW_014024182v1 9509 367 - 22698 I a score=365163.000000 s hg38.chr5_KI270795v1_alt 103394 69 + 131892 aaaaaATAGATTCCTTTGACTTGACCCCTATTTATCCTCTTG-TTTTATAAAGTCAACAGGaagaaacaa s panTro5.chr5 3428449 69 - 181907262 aaaaaaTAGATTCCTTTGACTTGACCCCTATTTCTCCTCTTG-TTTTATAAAGTCAACAGGaagaaaaaa i panTro5.chr5 C 0 C 0 s panPan2.chrUn_NW_014024182v1 9876 68 - 22698 AAAAAATAGATTCCTTTGACTTGACCCCTATTTCTCCTCTTG-TTTTATAAAGTCAACAGGaagaaa-aa i panPan2.chrUn_NW_014024182v1 I 367 C 0 s gorGor5.CYUI01000356v1 83092 67 + 152767 aaaaaaTAGATT-CTTTGACTTGACCCCTATTTCTCCTCTTG-TTTTAT-AAGTCAACAGGaagaaacaa i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160330287 64 - 163208435 -----aTAGATTCCTCTGACTTGACCCCTATTTCTCCTCTTG-TTTTGTGAAGTCAACAGGaagaaaaaa i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3611638 70 - 180051392 aaaaaaTAGATTCCTTTGACTTGACCCCTATTTCTCCTCTTGTTTTTATAAAGTcaacaagaaaaaacaa i rheMac8.chr6 I 4 I 5 s macFas5.chr6 3798341 70 - 181584905 aaaaAATAGATTCCTTTGACTTGACCCCTATTTCTCCTCTTGTTTTTATAAAGTcaacaagaaaaaacaa i macFas5.chr6 I 4 I 5 s macNem1.NW_012020287v1 3820167 70 + 4899514 aaaaAATAGATTCCTTTGACTTGACCCCTATTTCTCCTCTTGTTTTTATAAAGTCAACAAGAAAAaacaa i macNem1.NW_012020287v1 I 4 I 17 s cerAty1.NW_012001120v1 3544318 70 - 3647740 aaaAAATAGATTCCTTTGACTTGACCCCTATTTCTCCTCTTGTTTTTATAAAGTcaacaagaaaaaacaa i cerAty1.NW_012001120v1 I 4 I 5 s chlSab2.chr23 79679056 70 + 82825804 aaaaaatagaTTCCTTTGACTTGACTCCTATTTCTCCCCTTGTTTTTATAAAGTcaacaagaaaaaacag i chlSab2.chr23 C 0 I 5 s manLeu1.NW_012103876v1 1642340 70 - 1768974 aaaaaaTAGATTCCTTTGACTTGACCCCTATTTCTCCTCTTGTTTTTATAAAGTcaacaagaaaaaacaa i manLeu1.NW_012103876v1 C 0 I 9 s colAng1.NW_012117422v1 124104 70 - 815015 aaaaaaTAGATTCCCTTGACTTGACCCCTATTTCTCCTCTTGTTTTTATAAAGTcaacaagaaaaaacaa i colAng1.NW_012117422v1 I 4 I 1 a score=6599.000000 s hg38.chr5_KI270795v1_alt 103463 9 + 131892 ----acaaacaaa s panTro5.chr5 3428518 9 - 181907262 ----acaaacaaa i panTro5.chr5 C 0 I 5 s panPan2.chrUn_NW_014024182v1 9944 9 - 22698 ----acaaacaaa i panPan2.chrUn_NW_014024182v1 C 0 C 0 s gorGor5.CYUI01000356v1 83159 9 + 152767 ----acaaacaaa i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160330351 9 - 163208435 ----acaaaaaaa i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3611713 4 - 180051392 ----acaa----- i rheMac8.chr6 I 5 I 3 s macFas5.chr6 3798416 4 - 181584905 ----acaa----- i macFas5.chr6 I 5 I 3 s macNem1.NW_012020287v1 3820254 4 + 4899514 ----acaa----- i macNem1.NW_012020287v1 I 17 I 3 s cerAty1.NW_012001120v1 3544393 4 - 3647740 ----acaa----- i cerAty1.NW_012001120v1 I 5 I 3 s chlSab2.chr23 79679131 4 + 82825804 ----acaa----- i chlSab2.chr23 I 5 C 0 s colAng1.NW_012117422v1 124175 8 - 815015 agcaacaa----- i colAng1.NW_012117422v1 I 1 C 0 e manLeu1.NW_012103876v1 1642410 9 - 1768974 I a score=7632225.000000 s hg38.chr5_KI270795v1_alt 103472 1373 + 131892 caacaaaaaaaaaa-cCCACCTGTGCTTAGAGAACACATCGGAACCTATGGTACTGTAGTGCCTTCTTTTCTGTCACTGTAGGTGGCCTCAGAGGGGAAAATTCATGCATATTCTGCATGTGCCACTTGTGAAGGAGAAATCTAGATGATAGGGAAGGTGAGTCTTCCTTGCTGGCTTTCGTCTGGGGAGCCACCCTGACTCCAGCTTTCTGGTTAGAATGAGGATTGGTGGTGATGAAGGAACATTATTTTCCAGGTAAAGCACTGTGACCGTGTTTCCACAAGCAGTTGCGTTTCCTTTAGCTGGTATGAGTTTGTGCGCGTGGACGGTGGGGTGTGTC--TGTGTGGGGTGGGATTTGTGTGGGGCGGCCGTGTGTCTGTGCCCACGTCTG-TTTCCGCTGGTGTTATACTCCGCCTAGACAGCAGAGTTGCAGGTGTAAGCTTTCTCAACAAGGAATGCCGTCCCCATTACTCCACAGCGTATATgtggagcctaaccgggtggactgcaaggcagttccgaccctcaccactcagggttagcaccagattccacaactccagagctgagtcccacaaaactgcccttacttcagacaccagctgaactttgggagtccccaagccacctgcacttctgacaaactggctataaattcaaggattaccatgacttcctcaggttcaaaacttcactagaaatgactcagagaattcag-aaaagggctatatttacaatttgattagaaatgatctgcatagagcaaggcgtatggggctggggggtcctggatgcatggcttccatgccTTCTGTCTGGGGAATC---GGGTGGCGTGCT--GGGggtgggttccaggtcacagttggattcaaaggtttcttgattggcagttggttgaaagggttaaactctgtcttaaaagttgaaatcagcttcaattaggtaacatggtgtggtcgggggtgggagtttgggaagttgtgggagccaaggttcttgtcacgtaaatgacacttccaggcagagggcttcagagaggatagacgtaaacgtctcttattggacttaaaaggtaacagactttctggaaagacctagtgatggagccatatgctctacagattgcaaatttcccacaaagagacagctgtgttgggccattccaaaaaatgtcagagaaatctgtctcggggtaaaatactcagacttccttcaggacctgctttcaggtgatgctataccagagcgcatttgaagttgggtatcttattgctacaaggcgtttcttccgtcagtcttaggatctctattttcatgtcactgctgctc-agttgggtctgaaccacaaagggtggagggaatactgaggcgtgccc s panTro5.chr5 3428532 1363 - 181907262 aaacaaaaaaaaaacCCCACCTGTGCCTAGAGAACACATCGGAACCTATGGCACTGTAGTGCCTTCTTTTCTGTCACTGTAGGTGGCCTCAGAGGGGAAAATTCATGCATATTCTGCATGTGCCACTTGTGAAGGAGAAATCTAGATGATAGGGAAGGTGAGTCTTCCTTGCTGGCTTTCATCTGGGGAGCCACACTGACTCCAGCTTTCTGGTTAGAATGAGGATTGGTGGCGATGAAGGAACATTATTTTCCAGGTAAAGCACTGTGACCGTGTTTCCACAAGCAGTTGCGTTTCCTTTAGCTGGTATGAGTTtgtgcgcgtgagcggtggggtgtgtc------------------tgtggggggcggccgtgtgcctgtgcCCACGTCTG-TTTCCCCTGGTGTTATACTACGCCTAGACAGCAGAGTTGCAGGTGTAAGCTTTCTCAACAAGGAATGCCGTTCCCATGACTCCACAGCGTATATgtggagcctaaccgggtggactgcaaggcagttccgaccctcaccactcagggttagcaccagattccacaactccagagctgagtcccacaaagctgcccttacttcagacaccagctgaactttggaagtccccaagccacctgcacttctgacaaactggctacaaattcaaggattaccatgacttcctcaggttcaaaacttcactagaaatgactcagagaactcag-aaaagggctatatttacaatttgattagaaatgatCTGCACAGAGCAAGGCGAATGGGGCTGGGGGGTCCTGGATGCATGGCTTCCATGCCTTCTGTCTGGGGAATCGTGGGGTGGCATGCTGGGGGggtgggttccaggtcacagatggattcaaaggtttcttgattggcaattggttgaaagggttaaactctgtcttaaaagttgaaatcagcttcaattaggtaacatggtgtggtcgggggtgggagtttgggaagttgtgggagcccaggttcttgtcacgtaaatgacacttccaggcagagggcttcagagaggatagacgtaaacgtctcttattggacttaaaaggtaacagactttctggaaagacctggtgatggagccatatgctctacagattgcagatttcccacaaagagacagctgtgttgggccattcccaaaaatgtcaaagaaatctatctcggggtaaaatacttagacttccttcaggacctgctttcaggtgatgctataccagagcgcgtttgaagtttggtatcttattgctacaaggcgtttcttccgtcagtcttaggatctctgttttcatgtcactgctgctc-agttgggtctgaaccacaaagggaggagggaatactgaggcgtgccc i panTro5.chr5 I 5 I 2272 s panPan2.chrUn_NW_014024182v1 9953 1360 - 22698 aaacaaaaaaaaaC-CCCACCTGTGCCTAGAGAACACATCGGAACCTATGGCACTGTAGTGCCTTCTTTTCTGTCACTGTAGGTGGCCTCAGAGGGGAAAATTCATGCATATTCTGCATGTGCCACTTGTGAAGGAGAAATCTAGATGATAGGGAAGGTGAGTCTTCCTTGCTGGCTTTCATCTGGGGAGCCACACTGACTCCAGCTTTCTGGTTAGAATGAGGATTGGTGGTGATGAAGGAACATTATTTTCCAGGTAAAGCACTGTGACCGTGTTTCCACAAGCAGTTGCGTTTCCTTTAGCTGGTATGAGTTtgtgcgcgtgagcggtggggtgtgtc------------------tgtgtggggcggccgtgtgcctgtgcCCACGTCTG-TTTCCCCTGGTGTTATACTCCGCCTAGACAGCAGAGTTGCAGGTGTAAGCTTTCTCAACAAGGAATGCCGTTCCCATTACTCCACAGCGTATATgtggagcctaaccgggtggactgcaaggcagttccgaccctcaccactcagggttagcaccagattccacaactccagagctgagtcccacaaagctgcccttacttcagacaccagctgaactttggaagtccccaagccacctgcacttctgacaaactggctacaaattcaaggattaccatgacttcctcaggttcaaaacttcactagaaatgactcagagaactcag-aaaagggctatatttacaatttgattagaaatgatCTGCAGAGAGCAAGGCGAATGGGGCTGGGGGGTCCTGGATGCATGGCTTCCATGCCTTCTGTCTGGGGAATCGTGGGGTGGCATGCT--GGGggtgggttccaggtcacagatggattcaaaggtctcttgattggcaattggttgaaagggttaaactctgtcttaaaagttgaaatcagcttcaattaggtaacatggtgtggtcgggggtgggagtttgggaagttgtgggagcccaggttcttgtcacgtaaatgacacttccaggcagagggcttcagagaggatagacgtaaacgtctcttattggacttaaaaggtaacagactttctggaaagacctggtgatggagccatatgctctacagattggagatttcccacaaagagacagctgtgttgggccattccaaaaaatgtcaaagaaatctatctcggggtaaaatacttagacttccttcaggacctgctttcaggtgatgctataccagagcgcgtttgaagtttggtatcttattgctacaaggcgtttcttccgtcagtcttaggatctctgttttcatgtcactgctgctc-agttgggtctgaaccacaaagggaggagggaatactgaggcgtgccc i panPan2.chrUn_NW_014024182v1 C 0 C 0 s gorGor5.CYUI01000356v1 83168 1373 + 152767 caaaacaaaaaaaA-CCCACCTGTGCTTAGAGAACACATCGGAACCTATGGCACTGTAGTGCCTTCTTTTCTGTCACTGTAGGTGGCCTCAGAGGGGAAAATTCATGCATATTCTGCATGTGCCACTTGTGAAGGAGAAATCTAGATGATAGGGAAGGTGAGTCTTCCTTGCTGGCTTTCGTCTGGGGAGACACCCTGACTCCAGCTTTCTGGTTAGAATGAGGATTGGTGGCGATGAAGGAACATTATTTTCCAGGTAAAGCACTGTGACTGTGTTTCCACAAGCAGTTGCGTTTCCCTTAGCTGgtatgagtttgtgcgtgtgggcggtggggtgtgtc--tgtgtggggtgggatttgtgtgGGGCGGCTGTATGCCTGTGCCCATGTCTGTTTTCCGCTGGTGTTATACTCCGCCTAGACAGCAGAGTTGCAGGTGTAAGCTTTCTCAACAAGGAATGTCGTCCCCATTACTCCACAGCGTATATG-GGAGCCTAA-Cgggtggactgcaaggcagttccgaccctcaccactcagggttagcaccagattccacaactccagagctgagtcccacaaaactgcccttacttcagacaccagctgaactttggaagtccccaagccacctgcacttctgacaaactggctataaattcaaggattaccatgacttcctcaggttcaaaacttcactagaaatgactcagagaactcag-aaaagggctatatttacaatttgattagaaatgatctgcatagagcaaggtgtatggggctggggggtcctggatgcatggcttccatgccTTCTGTCTGGGGAATCGTGGGGTGGCGTGCT--GGGggtgggttccaggtcacagatagattc-aaggtttcttgattggcaattggttgaaaaggttaaactctgtcttaaaagttgaaatcagcttcaattaggtaacatggtgtggtcgggggtgggag-ttgggaagttgtgggagccaaggttcttgtcacgtaaatgacacttccaggcagagggcttcagagaggatagacgtaaacgtctcttattggacttaaaaggtaacagactttctggaaagacctagtgatggagccatatgctctacagatcgcaaatttcccacaaagagacagctgtgttgggccattccaaaaaatgtcaaagaaatctatctcggggtaaaatactcagacttccttcaggacttgctttcaggtgatgctataccagagcgtgtttgaagtttggtatcttattgctacaaggcatttcttctgtcagtcttaggatctctattttcatgtcactgctgctc-agttgggtctgaaccgcaaagggtggagggaatactgaggcgtgccc i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160330360 1378 - 163208435 caacaaaaaaaaa--CCCACCTGTGCCTAGAGAACACATCAGAACCTATGGCGCTGTAGTGCCTTCTTTTCTGTCACTGTAGGTGGCCTCAGAGGGGAAAATTCATGCGTATTCTGCATGTGCCACTTGTGAAGGAGAACTCTAGATGATAGGGAAGGTGAGTCTTCCTTGCTGACTTTCGTCCGGGGAGCCACCCTGACTCCAGCTTTCTGGTTAGAATGAGGATTGGTGGCGATGAAGGAACATTATTTTCCAGGTAAAGCACCGTGACCGTGTTTGCACAAGCAGTTGCGTTTCCTTTAGCTGGTATGAGTTTGTGCGCGTGGGCGGTGGGGTGTGTCTGTGTGTGGGGGGGGATTTGTGTGGGGCAGCTGTGTGCATGTGCCCATGTCTG-TTTCCCCTGGTGTTATACTCTGCCTAGACAGCAGAGTTGCAGGTGTAAGCTTTCTCAACAAGGAATGCCATCCCCATTACTCCACAGCGTATATgtggagcctagccgggtggactgcaatgcagttccgaccctcaccactcagggttagtaccagattccacaactccagagctgagtcccacaaagctgcccttacttcagacaccagctgaactttggaagttcccaagccacctgcacttccgacaaactggctataaattcaaggattaccatgacttcctcaggttcaaaacttcactagaaatgactcagagaactcag-aaaagggctgtatttacaatttgattagaaatgatctgcatagagcaaggtgtatggggctggggggtcctggaggcatggcttccatgccTTCTGTCTTGGGAATCGTGGGGTGGGGTGCT--gcgggtgggttccaggtcacagatggattcaaaggtttcttgattggaaattggttgaaagggttaagctctgtcttaagagttgaaatcagcttcaattaggtaacatggtgtggccgggggtgggggtttcagaggctgtgggagccaaggttcttgtcacgtgaatgacacttccaagcagagggcttcagagaggatagacgtaaatgtctcttattggacttaaaaggtgacagactttctggaaagacctagtgatggagccatatgctctacagattgcaaatttcccacaaagagacagttgtgtttggccattccaaaaactgtcaaagaaatatatctcagggtaaaatactcagacttccttcaggacctgctttcaggtgatgctataccagagcacgtttgaagtttagtatcttattgctacaaagcgtttcttccgtcagtcttaggctctctattttcatgtcactgctgctcgggttgggtctgaaccacaaagggaggagggaatactgaggtgtgccc i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3611720 1369 - 180051392 caacaacaacaa---ACCACCTGTGCCAAAAGAACACAGCAGAACCTATGGCACTGTAGTGCCTTCTTTTCTGTCACTGTAGGTGGCCTCAGGGGGGGAAATTCATGCATATTCTGCATGTGGCACTTGTGAAGGAGAGAGCTAGATGATAGGGAAGGTGAGTCTTCCTTGCTGGCTTTCATGTGGGGAGCCACCCTGATTCCAGTTTTCTGGTTGGAATGAGGATTGGTGGCAATGAAGGAACATTATTTTCCAGGTAAAGCACTGTGACCGTGTTTCCGCAAGCAACTGCGTTTCCTTTAGATAGTATGGGTTTGTGCGTATGGGTGGTGGGGTGTGTC--TGTATG----TGAATTTGTGTGGGGTGGCTGTGTGCATGCGCCCATGTCTG-TTTCCCCTGGTGTTATACTCTGCTTAGACAGCAGAATTGCAGGTGTAAGCTTTCTCAACAAAGAATCCCGTCCCCACTATTCCACAGGATATATgtggatccaaactgggtggactgc-atacagttccaaccctcaccactcagggttagcaccagatcccacaactccagagctaagtcccacaaaactgcccttacttcagacaccagctgaactttggaagtccccaagccacctgcacttccgacaaactggctataaattcaaggattaccatgacttcctcaggttcaaaacttcactagaaatgactcagagaactcag-aaaagtgctatatttacaatttgattagaaatgatccacacagagcaaggtgtatgggtctgggggatcctggatgcgtagcttccatgccttctgtttggggaatcgtGGGGTGGGGTGCT--GGGggtgggttccaggtcacagatggattcaaagatttcttgattggcagttggttgaaagggttaagctctgtcttaagagttgaaatcagcttcaattaggtaacacggtgcggtggggggtgggagtttggggagttgtgggagccaaggttcttgtcacgtaaatgacacttccaggcagagggcttcagagaggatagacgcaaacgtctctcagtggacttaaatggtgacagactttctggaaagacctagtaagggagccatatgctctacagattgcaaatttcccacaaagagacagctgtgttgggccattccaaaaaatgtcaaagaaatacatttcggggtaaaatgcttggatttccttcaggacctgctttcaggggatgctataatagagtgcgtttgaagtttggtatcttactgctacaaagcgtttattccgtcagtcataggatctctattttcatgtcactgctgttt-ggttgggtctgaaccacaaagtgaggagggtatactgaggcgtgcac i rheMac8.chr6 I 3 C 0 s macFas5.chr6 3798423 1369 - 181584905 caacaacaacaa---ACCACCTGTGCCAAAAGAACACAGCAGAACCTATGGCACTGTAGTGCCTTCTTTTCTGTCACTGTAGGTGGCCTCAGGGGGGGAAATTCATGCATATTCTGCATGTGGCACTTGTGAAGGAGAGAGCTAGATGATAGGGAAGGTGAGTCTTCCTTGCTGGCTTTCATGTGGGGAGCCACCCTGATTCCAGTTTTCTGGTTGGAATGAGGATTGGTGGCAATGAAGGAACATTATTTTCCAGGTAAAGCACTGTGACCGTGTTTCCGCAAGCAACTGCGTTTCCTTTAGATAGTATGGGTTTGTGCGTATGGGTGGTGGGGTGTGTC--TGTATG----TGAATTTGTGTGGGGTGGCTGTGTGCATGCGCCCATGTCTG-TTTCCCCTGGTGTTATACTCTGCTTAGACAGCAGAATTGCAGGTGTAAGCTTTCTCAACAAAGAATCCCGTCCCCACTATTCCACAGGATATATgtggatccaaactgggtggactgc-atacagttccaaccctcaccactcagggttagcaccagatcccacaactccagagctaagtcccacaaaactgcccttacttcagacaccagctgaactttggaagtccccaagccacctgcacttctgacaaactggctataaattcaaggattaccatgacttcctcaggttcaaaacttcactagaaatgactcagagaactcag-aaaagtgctatatttacaatttgattagaaatgatccacacagagcaaggtgtatgggtctgggggatcctggatgcgtagcttccatgccttcggTTTGGGGAATCGTGGGGTGGGGTGCT--GGGggtgggttccaggtcacagatggattcaaaggtttcttgattggcagttggttgaaagggttaagctctgtcttaagagttgaaatcagcttcaattaggtaacacggtgcggtggggggtgggagtttggggagttgtgggagccaaggttcttgtcacgtaaatgacacttccaggcagagggcttcagagaggatagacgcaaacgtctctcagtggacttaaatggtgacagactttctggaaagacctagtaagggagccatatgctctacagattgcaaatttcccacaaagagacagctgtgttgggccattccaaaaaatgtcaaagaaatacatttcggggtaaaatgcttggatttccttcaggacctgctttcaggggatgctataatagagtgcgtttgaagtttggtatcttactgctacaaagcgtttattccgtcagtcataggatctctattttcatgtcactgctgttt-ggttgggtctgaaccacaaagtgaggagggtatactgaggcgtgcac i macFas5.chr6 I 3 C 0 s macNem1.NW_012020287v1 3820261 1369 + 4899514 caacaacaacaa---ACCACCTGTGCCAAAAGAACACAGCAGAACCTATGGCACTGTAGTGCCTTCTTTTCTGTCACTGTAGGTGGCCTCAGGGGGGGAAATTCATGCATATTCTGCATGTGGCACTTGTGAAGGAGAGAGCTAGATGATAGGGAAGGTGAGTCTTCCTTGCTGGCTTTCATGTGGGGAGCCACCCTGATTCCAGTTTTCTGGTTGGAATGAGGATTGGTGGCAATGAAGGAACATTATTTTCCAGGTAAAGCACTGTGACCGTGTTTCCGCAAGCAACTGCGTTTCCTTTAGATAGTATGGGTTTGTGCGTATGGGTGGTGGGGTGTGTC--TGTATG----TGAATTTGTGTGGGGTGGCTGTGTGCATGCGCCCATGTCTG-TTTCCCCTGGTGTTATACTCTGCTTAGACAGCAGAATTGCAGGTGTAAGCTTTCTCAACAAAGAATCCCGTCCCCACTATTCCACAGGATATATgtggatccaaactgggtggactgc-atacagttccaaccctcaccactcagggttagcaccagatcccacaactccagagctaagtcccacaaaactgcccttacttcagacaccagctgaactttggaagtccccaagccacctgcacttctgacaaactggctataaattcaaggattaccatgacttcctcaggttcaaaacttcactagaaatgactcagagaactcag-aaaagtgctatatttacaatttgattagaaatgatccacacagagcaaggtgtatgggtctgggggatcctggatgcgtagcttccatgccttctgtttggggaatcgtGGGGTGGGGTGCT--GGGggtgggttccaggtcacagatggattcaaaggtttcttgattggcagttggttgaaagggttaagctctgtcttaagagttgaaatcagcttcaattaggtaacacggtgcggtggggggtgagagtttggggagttgtgggagccaaggttcttgtcacgtaaatgacacttccaggcagagggcttcagagaggatagacgcaaacgtctctcagtggacttaaatggtgacagactttctggaaagacctagtaagggagccatatgctctacagattgcaaatttcccacaaagagacagctgtgttgggccattccaaaaaatgtcaaagaaatacatttcggggtaaaatgcttggatttccttcaggacctgctttcaggggatgctataatacagtgcgtttgaagtttggtatcttactgctacaaagcgtttattccgtcagtcataggatctctattttcatgtcactgctgttt-ggttgggtctgaaccacaaagtgaggagggtatactgaggcgtgcac i macNem1.NW_012020287v1 I 3 C 0 s cerAty1.NW_012001120v1 3544400 1348 - 3647740 caacaacaacaa---ACCACCTGTGCCAAAAGAACACAGCAGAACCTATGGCACTGTAGTGCCTTCTTTTCTGTCACCGTAGGTGGCCT--GGGGGGGGAATTCATGCATATTCTGCATGTGGCACTTGTGAAGGAGAGAGCTAGATGCTGGGGAAGGTAAGTCTTCCTCGCTGGCTT------------------TGATTCCAGTTTTCTGCTTGGAATGAGGATTGGTGGCGATGAAGGAACATTATTTTCCAGGTAAAGCACTGTGACCGTGTTTCCACAAGCAACTGCGTTTCCTTTAGATAGTATGAGTTTGTGCGTATGGGTGGTGGGGTGTGTC--TGTATG----TGAATTTGTGT-GGGTGGCTGTGTGCATGCGCCCATGTCTG-TTTCCCCTGGTGTTATACTCTGCTTAGACAGCAGAATTGCAGGTGTAAGCTTTCTCAACAAAGAATCCCGTCCCCACTATTCCACAGGATATATgtggatccaaactgggtggactgc-atacagttccaaccctcaccactcagggttagcaccagatcccacaactccagagctaagtcccacaaaactgcccttacttcagacaccagctgaactttggaagcccccaaaccacctgcacttccgacaaactggctataaattcaaggattaccatgacttcctcaggttcaaaacttcactagaaatgactcagagaactcag-aaaagtgctatatttacaatttgattagaaatgatccacacagagcaaggtgtatggggctgggggatcctggatgcatggcttccatgccTTCTGTCTGGGGAATCGTGGGGTGGGGTGCT--GGGggtgggttccaggtcacagatggattcaaaggtttcttgattggcagttggttgaaagggttaagctctgtcttaagagttgaaatcagcttcaattaggtaacacggtgcggtggtgggtgggagtttggggagttgtgggagccaaggttcttgtcacgtaaatgacacttccaggcagagggcttcagagaggatagacgcaaacgtctctcagtggacttaaacggtgacagactttctggaaagacctagtaagggagccatatgctctacagattgcaaatttcccacaaagagacagctgcgttgggccattccaaaaaatgtcaaagaaatatatttcggggtaaaatacttggatttccttcaggacctgctttcaagtgatgctataatagagtgcgtttgaagtttggtatcttattgctacaaagtgtttgttccgtcagtcataggatctctattttcacgtcactgctgtgt-ggttgggtctgaaccacaaagtgaggagggtatactgaggtgtgccc i cerAty1.NW_012001120v1 I 3 C 0 s chlSab2.chr23 79679135 1369 + 82825804 caacaacaacaa---ACCACCTGTGCCAAAAGAACACAGCAGAACCTATGGCACTGTAGTGCCTTCTTTTCTGTCACTGTAGGTGGCCTCGGGGGGGGAAATTCGTGCATATTCTGCATGTGCCACTTGTGAAGGAGAGAGCTGGGTGATAGGGAAGGTGAGTCTTCCTTGCTGGCTTTCGTGTGGGGAGCCACCCTGATTCCAGTTTTCTGGTTGGAATGAGGATTGGTGGCGATGAAGGAACATTATTTTCCAGGTAAAGCACTGTGACCGTGTTTCTGCAAGCAACTGCGTTTCCTTTAGATAGTATGAGTTTGTGCATATGGGTGGTGGGGTGTGTC--TGTATG----TGAATTTGTGTGGGGTGGCTGTGTGCATGCGCCCATGTCTG-TTTCCCCTGGTGTTATACTCTGCTTAGACAGCAGAATTGCAGGTGTAAGCTTTCTCAACAAAGAATCCCGTCCCCACTACTCCACAGGATATATgtggatccaaactgggtggactgc-acactgttccaaccctcaccactcagggttagcaccagatcccacaactccagagctaagtcccacaaaactgcccttacttcagacactagctgaactttggaagtccccaagccacctgcacttccgacaaactggctataaattcaaggattaccatgacttcctcaggttcaaaacttcactagaaatgactcagagaactcag-aaaagtgctatatttacaatttgattagaaatgatCCACACAGAGCAAGGTGTATGGGGCTGGGGGATCCTGGATGCGTGGCTTCCATGCCTTCTGTCTGGGGAATCGTGGGGTGGGGTGCT--GGGggtgggttccaggtcacagatggattcaaaggtttcttaattggcaattggttgaaagtgttaagctctgtcttaagagttgaaatcagcttcaattaggtaacacggtgcggtggggggtgggagtttggggagttgtgggagccaaggttcttgtcacgtaaatgacacttccagtcagagggcttcagagaggatagacgcaaacgtctctcagtggacttaaaaggtgacagactttctggaaagacctagtaagggagccatatgctctacagattgcaaatttcccacaaagagacagctgtgttgggccattccaaaaaatgtcaaagaaatacatttcagggtaaaatgcttggatttccttcagaacctgctttcaggggatgctataatagagtgcgtttgaagtttggtatcttattgctacaaagcgtttgttccgtcagtcataggatctctattttcacgtcactgctgttt-ggttgggtctgaaccacaaagtgaggagggcatactgaggtgtgccc i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1642419 1368 - 1768974 caacaacaacaa---ACCACCTGTGCCAAAAGAACACAGCAGAACCTATGGCGCTGTAGTGCCTTCTTTTCTGTCACCATAGGTGGCCTC-AGGGGGGAAATTCATGCATATTCTGCATGTGGCACTTGTGAAGGAGAGAGCTAGATGATAGGGAAGGTGAGTCTTCCTCGCTGGCTTTCGTGTGGGGAGCCACCCTGATTCTAGTTTTCTGGTTGGAATGAGGATTGGTGGCGATGAAGGAACATTATTTTCCAGGTAAAGCACTGTGACCGTGTTTCCACAAGCAACTGCGTTTCCTTTAGATAGTATGAGTTTGTGCGTATGGGTGGTGGGGTGTGTC--TGTATG----TGAATTTGTGTGGGGTGGCTGTGTGCATGCGCCCATGTCTG-TTTCCCCTGGTGTTATACTCTGCTTAGACAGCAGAATTGCAGGTGTAAGCTTTCTCAACAAAGAATCCCGTCCCCACTATTCCACAGGATATATgtggatccaaactgggtggactgc-atacagttccaaccctcaccactcagggttagcaccagatcccacaactccagagctaagtcccacaaaactgcccttacttcagacaccagctgaactttggaagtccccaagccacctgcacttccgacaaactggctataaattcaaggattaccgtgacttcctcaggttcaaaacttcactagaaatgactcagagaactcag-aaaagtgctatatttacaatttgattagaaatgatccacacagagcaaggtgtatgggtctgggggatcctggatgcgtagcttccatgccttctgtttggggaattgtGGGGTGGGGTGCT--GGGggtgggttccaggtcacagatggattcaaaggtttcttgattggcagttggttgaaagggttaagctctgtcttaagagttgaaatcagcttcaattaggtaacagggtgcggtggtgggtgggagtttggggagttgtgggagccaaggttcttgtcacgtaaatgacacttccaggcagagggcttcagagaggatagacgcaaacgtctctcagtggacttaaacggtgacagactttctggaaagacctagtaagggagccatatgctctacagattgcaaatttcccacaacgagacagctgcgttgggccattccaaaaaatgtcaaagaaatatatttcggggtaaaatacttggatttccttcaggacctgctttcaagtgatgctataatagagtgcgtttgaagtttggtatcttattgctacaaagtgtttgttccgtcagtcataggatctctattttcacgtcactgctgtgt-ggttgggtctgaaccacaaagtgaggagggtatactgaggcgtgccc i manLeu1.NW_012103876v1 I 9 C 0 s colAng1.NW_012117422v1 124183 1369 - 815015 caacaacaacaa---ACCACCTGTGCCAAAAGAACACAGCAGAACCTATGGCACTGTAGTACCTTCTTTTCTGTCACTGTAGGTGGCCTCAGGGGGAGAAATTCATGCATATTCTGCATGTGCCACTTGTGAAGGAGAGAGCTAGATGATAGGGAAGGTGAGTCTTCCTTGCTGGCTTTCGTGTGGGGAGCCACACAGATTCCAGTTTTCTGGTTGGAATGAGGATTGGTGGCAATGAAGGAACATTATTTTCCAGGTAAAACACTGTGACCGTGTTTCTGCAAGCAACTGTGTTTCCTTTAGATAGTATGAGTTTGTGCGTATGGGTGGTGGGGTGTGTC--TGTATG----TGAATTTGTGTGGGGTGGCTGTGTGCATGCGCCCATGTCTG-TTTCCCCTGGTGTTATACTCTGCTTAGACAGCAGAATTGCAGGTGTAAGCTTTTTCAACAAAGAATCCCGTCCCCACTACTCCACAGGATATATgtggatccaaactgggtggactgc-atacagttccaaccctcaccactcagggttagcaccagatcccacaactccagagctaagtcccacaaaactgcccttacttcagacaccagctcaactttggaagtccccaagccacctgcacttccaacaaactggctataaattcaaggattaccatgacttcctcaggttcaaaacttcactagaaatgactcagagaactcagaaaaagtgctatatttacaatttgattagaaatgatccacatagagcaaggtgtatggggctgggggatcctggatgcacggcttccatgccTTCTGTCTGGGGAATCGTGGggtgggatgct--gggggtgggttccaggtcacagatggattcaaaggtttcttgattggcaattggttgaaagggttaagctctgtcttaagagttgaaatcagcttcaattaggtaacacggtgcagtggagggtgggagtttggggaattgtgggagccaaggttcttgtcacgtaaatgacacttctaggcagagggcttcagagaggatagacgcaaacatctcttagtggacttaaaaggtgacagactttctggaaagacctagtaagggag-catatgctctacagattgcaaatttcccacaaagagacagctgtgttgggcctttccaaaaaatgtcaaagaaatatatttcggggtaaaatacttggatttccttcaggacctgctttcaggggatgctataatagagtgcgtttgaagtttggtatcttattgctacaaagcgtttgttccgtcagtcataggatctctattttcacgtcactgctgttt-ggttgggtctgaaccacaaagtgaggagggtatactgaggcgtgccc i colAng1.NW_012117422v1 C 0 C 0 a score=2708462.000000 s hg38.chr5_KI270795v1_alt 104845 473 + 131892 gacccctcttctccctcatggcctgaatgaagttttcaggtttatttgggtccccttggctgagaggaggatccgttcagttcattgaggggcttagaaatttaattttaatttacaTTGTAAAGTGTAAACATATACAATGTTGATCAGTTATACCTGAATAGAGCTGAGGGAAAAGAGAATAAAAGGAACCATGACTAACAACAATGAAAagaaatggaagctgagtcacatttaaaatatttattaatctgttttcaaataacagaaacaagaccattacagagcaacataaatagcatctttttgtgaaaaatattttccaaagcaaaagtgatttgtgggaaaagtggcattgctttcccattctccgagagtctgtcacatctgacaacaggagCTGGGACCCTGTGCCTGCCTCAGTCGGGGCACCGCACTCCCCACAGCACACAGCCTCTGGGCACTTGGCCAGG s panTro5.chr5 3432167 473 - 181907262 gacccctcttctccctcatggcctgaatgaatttttcaggtttatttgggtccccttggctgagaggaggatccattcagttcattgaggggcttagaaatttaattttaatttacaTTGTAAAGTGTAAACATATACGATGTTGATCAATTATACCTTAATAAAGCTGAGGGAAAAGAGAATAAAAGGAACCATGACTAACAACAATGAAAagaaatggaagctgagtcacatttaaaatatttattaatctgttttaaaataacagaaacaagaccattacagagcaacataaatagcatctttttgtgaaaaatattttccaaagcaaaagtgatttgtgggaaaagtggcattgctttcccattctccgagagtctgtcacatctgacaacaggagctgggtccctgtgcctgcctcAGTCGGGGCACCGCACTCCCCACAGCACACAGCCTCTGGGCACTCGGCCAGG i panTro5.chr5 I 2272 C 0 s panPan2.chrUn_NW_014024182v1 11313 473 - 22698 gacccctcttctccctcatggcctgaatgaatttttcaggtttatttgggtccccttggctgagaggaggatccattcagttcattgaggggcttagaaatttaattttaatttacaTTGTAAAGTGTAAACATATACGATGTTGATCAATTATACCTTAATAAAGCTGAGGGAAAAGAGAATAAAAGGAACCATGACTAACAACAATGAAAagaaatggaagctgagtcacatttaaaatatttattaatctgttttaaaataacagaaacaagaccattacagagcaacataaatagcatctttttgtgaaaaatattttccaaagcaaaagtgatttgtgggaaaaatggcattgctttcccattctccgagagtctgtcacatctgacaacaggagctgggtccctgtgcctgcctcAGTCGGGGCACCGCACTCCCCACAGCACACAGCCTCTGGGCACTTGGCCAGG i panPan2.chrUn_NW_014024182v1 C 0 C 0 s gorGor5.CYUI01000356v1 84541 470 + 152767 -gaccctcttctccctcatggcctgaatgaatttttcaggtttatttgggtccccttggctgagaggaggatccgttcagttcactgaggggcttagaaatttaattttaatttacaTTGTAAAGTGTAAACATACACAATGTTGATCAATTATACCTTAATAGAGCTGAGGG-AAAGAGAATGAAAGGAACCATGACTAACAACAATGAAAagaaatggaagctgagtcacatttaaaatatttattaatctgttttcaaataacagaaacaagaccattacagagcaacataaatagcatctttttgtgaaaaatattttccaaagcaaaagtgatttgtgggaaaactggcattgctttcccattctccgagagtctgtcacatctgacaacaggagCTGGGACCCTGTGCCTGCCTCAGTCGGGGCACCGCACTCCCAACAGCACACAGCCTCTGGGCACTTGG-CAGG i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160331738 473 - 163208435 gacccctcttctccctcatggcctgaatgaatttttcaggtttatttgggtccccttggctgagaggagggtccgttcagttcattgaggggattagaaatttaattttaatttacattgtaaactgtaaacatatacaatgttgatcaattataccttaataaagctgagggaaaaGAGAATAAAAGGAACCATGACTAACAACAATGAAAagaaatggaagctgagtcacatttaaaatatttattaatctgttttaaaataacaaaaacaagaccattacagagcaacataaatagcatctttttgtgaaaaatattttccaaagcaaaagtgatttgtgggaaaagtggcattgcttCCCCGTTCTCCCAGAGTCTGTCACATCTGACAACAGGAACTGGGTCCCTGTGCCTGCCTCAGTTGTGGCACCGCACTCCCCACAGCACACGGCCTCTGGGCACTTGGCCAGG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3613089 473 - 180051392 aacccctcttctcccccatggcctgaatgaatttttcaggtttatttggatccccttggctgagaggagggtccattcagtccgttgaggggcttagaaatttaattttaatttacaTTGTAAAGTGTAAACATATACAATGTTGATCAATTGTACCTTAATAAAGCTGAGGGAAAAGAGAATAAAAGGAATCATGACTAACAACAATGAAAagaaatggaagctgagaaacatttacaatatttattaatctgtttaaaactaacagaaacaagaccattacatagcaacataaatagcatatttttgtgaaaaatattttcgaaagcaaaagtaatttgtgggaaaagtggcattgccttCCCGTCCTCTGAGAGTCTGTCACATCTGACAACAGGAGCTGGGTCCCTGTGCCTGCCTCAACTGGGGCACCGCACTCCCCACAGCACATAGCTTCTGGGCACTTGGCCAGG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3799792 473 - 181584905 aacccctcttctcccccatggcctgaatgaatttttcaggtttatttggatccccttggctgagaggaggctccattcagtccgttgaggggcttagaaatttaattttaatttacaTTGTAAAGTGTAAACATATACAATGTTGATCAATTGTACCTTAATAAAGCTGAGGGAAAAGAGAATAAAAGGAATCATGACTAACAACAATGAAAagaaatggaagctgagaaacatttacaatatttattaatctgtttaaaaataacagaaacaagaccattacatagcaacataaatagcatatttttgtgaaaaatattttcgaaagcaaaagtaatttgtgggaaaagtggcattgccttCCCGTCCTCTGAGAGTCTGTCACATCTGACAACAGGAGCTGGGTCTCTGTGCCTGCCTCAACTGGGGCACTGCACTCCCCACAGCACATAGCTTCTGGGCACTTGGCCAGG i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3821630 473 + 4899514 aacccctcttctcccccatggcctgaatgaatttttcaggtttatttggatccccttgactgagaggagggtccattcagtccgttgaggggcttagaaatttaattttaatttacaTTGTAAAGTGTAAACATATACAATGTTGATCAATTGTACCTTAATAAAGCTGAGGGAAAAGAGAATAAAAGGAATCATGACTAACAACAATGAAAagaaatggaagctgagaaacatttacaatatttattaatctgtttaaaaataacagaaacaagaccattacatagcaacataaatagcatatttttgtgaaaaatattttcgaaagcaaaagtaatttgtgggaaaagtggcattgccttCCCGTCCTCTGAGAGTCTGTCACATCTGACAACAGGAGCTGGGTCCCTGTGCCTGCCTCAACTGGGGCACTGCACTCCCCACAGCACATAGCTTCTGGGCACTTGGCCAGG i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012001120v1 3545748 473 - 3647740 aacccctcttctccctcatggcctgaatgaatttttcaggtttatttggatccccttggctgagaggagggtccattcagtccgttgaggggcttagaaatttaattttaatttacaTTGTAAAGTGTAAACATATACAATGTTGATCAATTGTACCTTAATAAAGCTGAGGGAAAAGAGAATAAAAGGAATCATGACTAACAACAATGAAAagaaatggaagctgagaaacatttacaatatttattaatctgtttaaaaataacagaaacaagaccattacatagcaacataaatagcatatttttgtgaaaaatattttcgaaagcaaaagtaatttgtgggaaaagtggcattgccttCCCGTCCTCTGAGAGTCTGTCACATCTGACAACAGGAGCTGGGTCCCTGTGCCTGCCTCAGCTGGGGCACTGCACTCCCCACAGCACATGGCTTCTGGGCACTCGGCCAGG i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79680504 473 + 82825804 aacccctcttctccctcatggcctgaatgaatttttcaggtttatttggatccccttggctgagaggagggtccattcagtccgttgaggggcttagaaatttaattttaatttacaTTGTAAAGTGTAAACATATACAATGTTGATCAATTATACCTTAATAAAGCTGAGGGAAAAGAGAATAAAAGGAATCATGACTAACAACAATGAAAagaaatggaagctgagaaacatttacaatatttattaatctgtttaaaaataacagaaacaagaccattacatagcaacataaatagcatatttttatgaaaaatattttccaaagcaaaagtaatttgtgggaaaagtggaattgctttCCCGTCCTCCGAGAGTCTGTCACATCTGACAACAGGAGCTGGGTCCCTGTGCCTGCCTCAACTGGGGCACCGCACTCCCCATGGCACATAGCTTCTGGGCACTTGGCCAGG i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1643787 472 - 1768974 aacccctcttctccctcatggcctgaatgaatttttcaggtttatttggatccccttggctgagaggagggtccattcagtccgttgaggggcttagaaatttaattttaatttacaTTGTAAAGTGTAAACATATACAATGTTGATCAATTGTACCTTAATAAAGCTGAGGGAAAAGAGAATAAAAGGAATCATGACTAACAACAATGAAAagaaatggaagctgagaaacatttacaatatttattaatctgtttaaaaataacagaaacaagaccattacatagcaacataaatagcatatttttgtgaaaaatattttcgaaagcaaaagtaatttgtgggaaaagtggcattgccttCCCGTCCCCTGAGAGTCTGTCACATCTGACAACAGGAGCTGGGTCCCTGTGCCCGCCTCAACTGGGGCACCACACCCCCCACAGCACATAGCTTCTGGGCA-TTGGCCAGG i manLeu1.NW_012103876v1 C 0 C 0 s colAng1.NW_012117422v1 125552 473 - 815015 aacccctcttctccctcttggcctgaatgcatttttcaggtttgtttggatccccttggctgagaggagggtccattcagtccattgaggggcttagaaatttaattttaatttacaTTTTAAAGTGTAAACATATACACTGTTGATCAATTATACCTTAATAATGCTGAGGGAAAAGAGAATAAAAGGAATCATGACTAACAACAATGAAAagaaatggaagctgagaaacatttacaatatttattaatctgtttaaaaataacagaaacaagacaattacatagcaacataaatagcatatttttgtgaaaaatgttttccaaagcaaaagtaatttgtgggaaaagtgacattgctttCCCGTCCTCCGAGAGTCTGTCACATCTGACAACAGGAGCTGGGTCCCTGTGCCTGCCTCAACTGGGGCACTGCACTCCCCACAGCACATAGCCTCTGGGCACTTGGCCAGG i colAng1.NW_012117422v1 C 0 I 215 a score=10505.000000 s hg38.chr5_KI270795v1_alt 105318 2 + 131892 CA s panTro5.chr5 3432640 2 - 181907262 CA i panTro5.chr5 C 0 C 0 s panPan2.chrUn_NW_014024182v1 11786 2 - 22698 CA i panPan2.chrUn_NW_014024182v1 C 0 C 0 s gorGor5.CYUI01000356v1 85011 2 + 152767 CA i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160332211 2 - 163208435 CA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3613562 2 - 180051392 CA i rheMac8.chr6 C 0 I 372 s macFas5.chr6 3800265 2 - 181584905 CA i macFas5.chr6 C 0 I 5 s macNem1.NW_012020287v1 3822103 2 + 4899514 CA i macNem1.NW_012020287v1 C 0 I 459 s cerAty1.NW_012001120v1 3546221 2 - 3647740 CA i cerAty1.NW_012001120v1 C 0 I 4696 s chlSab2.chr23 79680977 2 + 82825804 CA i chlSab2.chr23 C 0 I 321 s manLeu1.NW_012103876v1 1644259 2 - 1768974 CA i manLeu1.NW_012103876v1 C 0 I 7299 e colAng1.NW_012117422v1 126025 215 - 815015 I a score=34391.000000 s hg38.chr5_KI270795v1_alt 105320 29 + 131892 TAGTAGCTCATACTTGTAAACCCAATTTT s panTro5.chr5 3432642 29 - 181907262 TAGTAGCTCATACTTGTAAACCCAATttt i panTro5.chr5 C 0 C 0 s panPan2.chrUn_NW_014024182v1 11788 29 - 22698 TAGTAGCTCATACTTGTAAACCCTAAttt i panPan2.chrUn_NW_014024182v1 C 0 C 0 s gorGor5.CYUI01000356v1 85013 29 + 152767 TAGTAGCTCATATTTGTAAACCCAATTTT i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160332213 29 - 163208435 TAGTAGCTCACACCTGTAAACCCAATTTT i nomLeu3.chr2 C 0 C 0 s macFas5.chr6 3800272 29 - 181584905 AGGTAGCTCACACCTGTAAACCCAATTTT i macFas5.chr6 I 5 I 228 e cerAty1.NW_012001120v1 3546223 4696 - 3647740 I e macNem1.NW_012020287v1 3822105 459 + 4899514 I e rheMac8.chr6 3613564 372 - 180051392 I e colAng1.NW_012117422v1 126025 215 - 815015 I e manLeu1.NW_012103876v1 1644261 7299 - 1768974 I e chlSab2.chr23 79680979 321 + 82825804 I a score=47251.000000 s hg38.chr5_KI270795v1_alt 105349 72 + 131892 TTCCTTCctccctccct------------------------------------------------------------------------------------------------------tcctt-ctttcatctctctctctctctctcCCCCCGCtttttttttttttttttta-- s panTro5.chr5 3432671 79 - 181907262 ttccttcctccctccctccc-----------------------------------------------------------------------------------------------tccttcctt-ctttcatctctctctctctctcctttttttttttttttttttttttttta-- i panTro5.chr5 C 0 C 0 s panPan2.chrUn_NW_014024182v1 11817 70 - 22698 ttccttcctccctccctccc-----------------------------------------------------------------------------------------------tccttcctt-ctttcatctctctctctccttc---------tttttttttttttttttta-- i panPan2.chrUn_NW_014024182v1 C 0 C 0 s gorGor5.CYUI01000356v1 85042 74 + 152767 TTccttcctccctccct--------------------------------------------------------------------------------------------------tccttccttcctttcatctctctctctctcccccctcc---tttttttttttttttttta-- i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160332242 170 - 163208435 ttccttccttccttccttcctccctccctcccatccttccttcctccctccaccccttccttcctccttccctccctccctccctcccccttccttcctccttccctccctctcttccttcctt-ctttcatctctctctctctctctctcC----tttttttttttttttttta-- i nomLeu3.chr2 C 0 C 0 s macFas5.chr6 3800529 75 - 181584905 tccctccctccctccct--------------------------------------------------------------------------------------------------cccttcctt-tctctctttctttctctctctctctctc---tttctttcttcccttcttctg i macFas5.chr6 I 228 C 0 e cerAty1.NW_012001120v1 3546223 4696 - 3647740 I e macNem1.NW_012020287v1 3822105 459 + 4899514 I e rheMac8.chr6 3613564 372 - 180051392 I e colAng1.NW_012117422v1 126025 215 - 815015 I e manLeu1.NW_012103876v1 1644261 7299 - 1768974 I e chlSab2.chr23 79680979 321 + 82825804 I a score=5922.000000 s hg38.chr5_KI270795v1_alt 105421 3 + 131892 aga s panTro5.chr5 3432750 3 - 181907262 aga i panTro5.chr5 C 0 C 0 s panPan2.chrUn_NW_014024182v1 11887 3 - 22698 aga i panPan2.chrUn_NW_014024182v1 C 0 C 0 s gorGor5.CYUI01000356v1 85116 3 + 152767 aga i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160332412 3 - 163208435 aga i nomLeu3.chr2 C 0 C 0 s macFas5.chr6 3800604 3 - 181584905 aga i macFas5.chr6 C 0 C 0 s colAng1.NW_012117422v1 126240 3 - 815015 aga i colAng1.NW_012117422v1 I 215 C 0 e cerAty1.NW_012001120v1 3546223 4696 - 3647740 I e macNem1.NW_012020287v1 3822105 459 + 4899514 I e rheMac8.chr6 3613564 372 - 180051392 I e manLeu1.NW_012103876v1 1644261 7299 - 1768974 I e chlSab2.chr23 79680979 321 + 82825804 I a score=64016.000000 s hg38.chr5_KI270795v1_alt 105424 32 + 131892 tggagtctggctctgttacccaggccggagcc s panTro5.chr5 3432753 32 - 181907262 tggagtctggctctgttacccaggctggagcc i panTro5.chr5 C 0 C 0 s panPan2.chrUn_NW_014024182v1 11890 32 - 22698 tggagtctggctctgttacccaggctggagcc i panPan2.chrUn_NW_014024182v1 C 0 C 0 s gorGor5.CYUI01000356v1 85119 32 + 152767 tggagtctggctctgttacccaggccggagcc i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160332415 32 - 163208435 tggagtatggctctgttaccgaggctggagca i nomLeu3.chr2 C 0 C 0 s macFas5.chr6 3800607 32 - 181584905 tggagtatgtctctgtcactcaggctatagtg i macFas5.chr6 C 0 C 0 s chlSab2.chr23 79681300 32 + 82825804 tggagtatgtctctgtcacccaggctgtagtg i chlSab2.chr23 I 321 C 0 s colAng1.NW_012117422v1 126243 32 - 815015 tggagtatgtctctgtcacccaggctgtagtg i colAng1.NW_012117422v1 C 0 C 0 e cerAty1.NW_012001120v1 3546223 4696 - 3647740 I e macNem1.NW_012020287v1 3822105 459 + 4899514 I e rheMac8.chr6 3613564 372 - 180051392 I e manLeu1.NW_012103876v1 1644261 7299 - 1768974 I a score=1755749.000000 s hg38.chr5_KI270795v1_alt 105456 471 + 131892 taatctcgcctcactgcaacctttgcatcccaggttcaagcaattctccttcctcaacctcccaagtagctgggattacaggcatgcaacgtgatgcccaggtaatttttgtatttttagcagagacggggttttgccacgttggccaggctggtctccagctccagatctcaggtgatctgcctgcctcggcctcccaaagtgctgggattacaggcataagccaccacacctggccCCAGTTTTCAATCATAAGGTACTATTCCCAAAATATGAAATGCTAAATGTCTC-----ATATCACCTTTGGCATTCAAATGTCCAACATCTCAGCGTTTTGTCTTA-----TTAAAGACTGCAAAAATGTACAAGACTTTAAAACCATGAAATTAACTAAGTAAAACTAAGGA-GACCCAAATAAAATTCAATGTACTTAAGgttcagtgcagctataacagaatatctaagactgggta------------attt s panTro5.chr5 3432785 471 - 181907262 taatctcgcctcactgcaacctttgcatcccagattcaagcaattctccttcctcaacctcccaagtagctaggattacaggcatgcaacgtgatgcccaggtaatttttgtatttttagcagagacggggttttgccacgttggccaggctggtctccagctccagatctcaggtgatctgcctgcctctgcctcccaaagtgctgggattacaggcataagccaccacacctggccCCAATTTTCAATCATAAGGTACTATTCCCAAAATATGAAATGCTAAATGTCTC-----ATAACACCTTAGGCATTCAAATGTCCAACATCTCAGCGTTTTGTCTTA-----TTAAAGACTGCAAAAATGTACAAGACTTTAAAACCATGAAATAAACTAAGTAAAACTAAGGA-GACCCAAATAAAATTCAATGTACTTAAGgttcagtgcagctataacagaatatctgagactgggta------------attt i panTro5.chr5 C 0 C 0 s panPan2.chrUn_NW_014024182v1 11922 471 - 22698 taatctcgcctcactgcaacctttgcatcccagattcaagcaattctccttcctcaacctcccaagtagctaggattacaggcatgcaacgtgatgcccaggtaatttttgtatttttagcagagacggggttttgccacgttggccaggctggtctccagctccagatctcaggtgatctgcctgcctctgcctcccaaagtgctgggattacaggcataagccaccacacctggccCCAATTTTCAATCATAAGGTACTATTCCCAAAATATGAAATGCTAAATGTCTC-----ATAACACCTTAGGCATTCAAATGTCCAACATCTCAGCGTTTTGTCTTA-----TTAAAGACTGCAAAAATGTACAAGACTTTAAAACCATGAAATAAACTAAGTAAAACTAAGGA-GACCCAAATAAAATTCAATGTACTTAAGGTTCAgtgcagctataacagaatatctgagactgggta------------attt i panPan2.chrUn_NW_014024182v1 C 0 C 0 s gorGor5.CYUI01000356v1 85151 469 + 152767 taatctcgcctcactgcaacctttgcatcccaggttcaagcaattctccttcctcaacctcccaagtagctgggattacaggcatgcaacgtgatgcccaggtaatttttgtatttttagcagagacagggttttgccacgttggccaggctagtctccagctccagatctcaggtgatccacctgcctcggcctcccaaagtgctgggattacaggcataagccaccacacctggccCCAGTTTTCACTCATAAGGTACTATT-CCAAAATATGAAATGCTAAATGTCTC-----ATTACACCTTTGGCATTCAAATGTCCAACATCTCAGCGTTTTGTCTTA-----TTAAAGACTGC-AAAATGTACAAGACTTTAAAACCATGAAATAAACTAAGTAAAACTAAGGA-GACCCAAATAAAATTCAATGTACTTAAGgttcagtgcagctataacagaatatctaagactgggta------------attt i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160332447 488 - 163208435 taatctcgcctcactgcagcctttgcatcccaggttcaagcaattctcctgcctcaacctcccaagtagctgggattacaggcatgcgacatgatgcccaggtaatttttgtatttttagtagagacggggtttcgccacattggccaggctggtctccagttccagatttcaggtgatctgcctgcctcggcctccgaaagtgctgggattacaggcgtaagccaccacacctggccCCAATTTTCAATCATAAGGTACTATTCCCAAAATATGAAATGCTAAATGTCTCATAATATAACACCTTTGGCATTCAAATGTCCAACATCTCAGCGTTTTGTCTTA-----TTAAAGACTGAAAAAATGTACGAGACTTTAAAACCATGAAATAAACTAAGTAAAACTAAGGA-GACCCAAATAAAATTCAATGTACTTAAGGTTCAgtgcagccataacagaatatctgagactgggtaatATTTTttattattt i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3613936 481 - 180051392 taatctcggttcactgcaaactttgcctcccggattcaagcgattctcctgcctcaacctcccaagtagctgggattacaggcatgcgccatgatgcccagataatttttgtatttttagtagagatggggtttcaccatgttggccaggcgggtctccaactccagatctcaggtgatctgcctgcctcggcttcctgaagtgctgggattacaggcgtgggccactgtgcctggccCCAGTTTTCAATCATAAGGTACTATTCCCAAAGTATCAAATGCTAAATGGCTCATAATATAACACCTGTGGCACTCAAATGCCCAACATCTCAGCATCTTGTCTTATTAGTTTAAAGACTGCAAAAATGTACAAGACTTTAAAACTATGAAATAAGCTAAGTAAAACTAGGGT-GACCCAAATAAAATTTAATGTACTTAAGgttcagtgcagctataatagaatacctaagactgggta------------attt i rheMac8.chr6 I 372 I 16 s macFas5.chr6 3800639 481 - 181584905 taatctcggttcactgcaaactttgcctcccggattcaagcgattctcctgcctcaacctcccaagtagctgggattacaggcatgcaccatgatgcccaggtaatttttgtatttttagtagagatggggtttcaccatgttggccaggcgggtctccaactccagatctcaggtgatctgcctgcctcggcttcctgaagtgctgggattacaggcgtgggccactgtgcctggccCCAGTTTTCAATCATAAGGTACTATTCCCAAAGTATCAAATGCTAAATGGCTCATAATATAACACCTGTGGCACTCAAATGCCCAACATCTCAGCATCTTGTCTTATTAGTTTAAAGACTGCAAAAATGTACAAGACTTTAAAACTATGAAATAAGCTAAGTAAAACTAGGGT-GACCCAAATAAAATTTAATGTACTTAAGGTTCAgtgcagctataatagaatacctaagactgggta------------attt i macFas5.chr6 C 0 I 16 s macNem1.NW_012020287v1 3822564 481 + 4899514 taatctcggttcactgcaaactttgcctcccggattcaagcgattctcctgcctcaacctcccaagtagctgggattacaggcatgcgccatgatgcccaggtaatttttgtatttttagtagagatggggtttcaccatgttggccaggcgggtctccaactccagatctcaggtgatctgcctgcctcggcttcctgaagtgctgggattacaggcgtgggccactgtgcctggccCCAGTTTTCAATCATAAGGTACTATTCCCAAAGTATCAAATGCTAAATGGCTCATAATATAACACCTGTGGCACTCAAATGCCCAACATCTCAGCATCTTGTCTTATTAGTTTAAAGACTGCAAAAATGTACAAGACTTTAAAACTATGAAATAAGCTAAGTAAAACTAGGGC-GACCCAAATAAAATTTAATGTACTTAAGgttcagtgcagctataatagaatacctaagactgggta------------attt i macNem1.NW_012020287v1 I 459 I 16 s chlSab2.chr23 79681332 477 + 82825804 taatctcggttcactgcaaactttgcctcccagattcaagtgattctcctgcctcaacctcccaagtagctgggattacaggcatgcgccatgacgcccagctaatttttgtatttttagtagagatggggtttcgccatgttggccaggcgggtctccaactccagatctcaggtgatctgcctgccttgggttcccaagttgctgggattacaggcatgggccaccatgcctggccCCAATTTTCAATCATAAGGTACTATTCCCAAAGTATCAAATGCTAAATGTCTCATAATATAACACCTGTGGCATTCAAATGCCCAACATCTCAGCATTTTGTCTTA-----TTAAAGACTGCAAAAATGTACAAGACTTTAAAACTATGAAATAAGCTAAGTAAAACTAGGGGAGACCCAAATAAAATTCAACGTACTTAAGgttcagtgcagctataatagaatacttaagactgggta------------attt i chlSab2.chr23 C 0 I 16 s colAng1.NW_012117422v1 126275 481 - 815015 caatatcggttcactgcaaactttgcctcccagattcaagcaactctcctgcctcaacctcccaagtagctgggattacaggcatgcgccatgatgcccagccaatttttgtatttttagtagacatgggatttcaccatgttggccaggcgggtctccaaccccagatctcaggtgatctgcctgcctcggcttcccgaagtgctgggattacaggcgtgggccactgcacctggccCCAATTTTCAATCATAAGGTACTATTCCCAAAGTATCAAATGCTAAATGTCTCATAATATAACAACTGTGGCATTCAAATGCCCAACATCTCAGCATTTTGTCTTATTAGTTTAAAGACTGCAAAAATGTACAAGACTTTAAAACTATGAAATAAGCTAAGTAAACCTAGGGA-GACCCAAATAAAATTCAATGTACTTAAGgttcagtgcagctataatagaatacctaagactgggta------------attt i colAng1.NW_012117422v1 C 0 I 5186 e cerAty1.NW_012001120v1 3546223 4696 - 3647740 I e manLeu1.NW_012103876v1 1644261 7299 - 1768974 I a score=1519269.000000 s hg38.chr5_KI270795v1_alt 105927 528 + 131892 tattattattatta-ttatt---a---Attttattt--tttttttgagacagagtctcgctctctcacccaggctggagtgcagtggtgcaatcttggctcactgcaagctatgcctcctgggttcacgccattctcctgcctcagcctcccgagtagctgggactacaggcgcccgccaccacgcccagctaat--tttgtgtatttttagcggagacagggtttcactgtgttggccaggatggtctcaatctcctgaccttgtgatccgcccgcctcggcctcccaaaatgctgcgattagaggcgtgagccaccgcaccaggccAagactgggtagtttatttttaaaaa-----agaggcttttttggctcaatattctggtgactggaaagtctgagattgggcagtgcacacggtgaggggcttgtgctgctccaactcctggcagaacgtggaaggggaaaccagcacaggcaaggagagcacatggcaagagaggaagcaagagggtccaggaagccaaactcacttccataaca s panTro5.chr5 3433256 525 - 181907262 TATTAttattatta-ttatt---a------tttttt--tttttttgagacagagtctcgctctgtcatccaggctggagtgcagtggtgcgatcttggctcactgcaagctacgcctcctgggttcacgccattctcctgcctcagcctcccgagtagctgggactacaggcgcctgccaccacgcccagctaat--tttgtgtatttttagtggagacagggtttcactgtgttggccaggatggtctcgatctcctgaccttgtgatccgcccgcctcggcctcccaaaatgctgcgattacaggcgtgagccaccgcaccaggccAagactgggtaatttattttcaaaaa-----agaggcttatttagctcaatattctggtgactgggaagtctgagattgggcagcgcacacggtgaggggcttgtgctgctccaactcctggcagaacgtggaaggggaaaccagcacaggcaaggagagcacatggcaagagaggaagcaagagggtccaggaagccgaactcacttccataaca i panTro5.chr5 C 0 C 0 s panPan2.chrUn_NW_014024182v1 12393 522 - 22698 tattattattatta-ttatt---a---------ttt--tttttttgagacagagtctcgctctgtcatccaggctggagtgcagtggtgcgatcttggctcactgcaagctacgcctcctgggttcacgccattctcctgcctcagcctcccgagtagctgggactacaggcgcctgccaccacgcccagctaat--tttgtgtatttttagtggagacagggtttcactgtgttggccaggatggtctcgatctcctgaccttgtgatccgcccgcctcggcctcccaaaatgctgcgattacaggcgtgagccaccgcaccaggccaagactgggtaatttatttttaaaaa-----agaggcttatttagctcaatattctggtgactggaaagtctgagattgggcagcgcacacggtgaggggcttgtgctgctccaactcctggcagaacgtggaaggggaaaccagcacaggcaaggagagcacatggcaagagaggaagcaagagggtccaggaagccgaactcacttccataaca i panPan2.chrUn_NW_014024182v1 C 0 C 0 s gorGor5.CYUI01000356v1 85620 525 + 152767 tattattattattatttatt---t------tttttt--tttttttgagacagagtctcgctctctcacccaggctggagtgcagtggtgcgatcttggctcactgcaagctacgcctcccgggttcacgccattctcctgcctcagcctcccgagtagctgggactacaggcgcctgccaccacgcccagctaat--tttgtgtatttttagtggagacagggtttcactgtgttggccaggatggtctcaatctcctgaccttgtgatccgcccgcctcggcctcccaaaatgctgcaattacaggcatgagccaccgcaccaggccaagactgggtagtttatttttaaaaa-----agaggcttttttggctcaatattctggtgactgg-aagtctgagattgggcagcacacacggtgaggggcttgtgctgctccaactcctggcagaacgtggaaggggaaaccagcacaggcaaggagagcacatggcaagagaggaagcaagagggtccaggaagccaaactcacttccataaca i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160332935 531 - 163208435 tattattattatta-ttatt---attGttgttgttt--tttttttgagacagagtcttgctctgtcacccaggctggagtgcagtggcgcgatcttggctcactgcaagctctgcctcctgggttcatgccgttctcctgcctcagcctcctgagtaggtgggactacaggcgcctgccaccacgcctagctaat--tttttgtatttttagtggagacagggtttcaccgtgttggccaggatggtctcgatctcctgaccttgtgatctgcccacctcggcctcccaaagtgctgggattacaggtgtgagccaccgcgccaggccAagactgggtaatttattttttaaaa-----agaggcttatttggttcaatactctggtgaccggaaagtctgagattgggcaacacacacagtgaggggcttgtgctgctccaacccctggcagaacgtggaaggcgaaaccagcatgggcaaggagagcacatggcgagagaggaagcaagagggtccaggaagccgaactcacttccataaca i nomLeu3.chr2 C 0 I 258 s rheMac8.chr6 3614433 530 - 180051392 tgttattattatta-ttatt---a---Attttattttatttttctgagacagagtctcgctctgtcgcccaggctggagtgcagtggcgtgatctcagctcgctgcaagctccacctcccgggttcatgccattctcctgcctcagcctcccgagtagctgggactacaggcgcctgtcaccactcccagctaattgtttttgtatttttagtagagacggggtttcactgtgtt-----ggatggtctcaatctcctgacctcgtgatccacccaccttggcctcccaaagttgtgggattacaggcgtgagccaccacacccagccAagactgggtaatttatttaaacaaaaaaaaagaggtttatttggctgaatatcctggtggctggaaagtctgagattgggcagc-ccca-ggtgaggggcttatgctgctccatctcctggcagaatgtggaaggggaaaccagcacaggcaaagagagcacacagcaagagaggaagcaagagggtccaggaagctgaactcacttctgtaaca i rheMac8.chr6 I 16 C 0 s macFas5.chr6 3801136 532 - 181584905 tattattattatta-ttatt---t---attttattttatttttttgagacagagtctcgctctgtcgcccaggctggagtgcagtggcgtgatctcagctcgctgcaagctccacctcccgggttcatgccattctcctgcctcagcctcccgagtagctgggactacaggcgcctgtcaccactcccagctaattgtttttgtatttttagtagagacggggtttcactgtgtt-----ggatggtctcaatctcctgacctcgtgatccacccaccttggcctcccaaagttgtgggactacaggcgtgagccaccacacccagccaagactgggtaatttatttaaacaaaaaaagagaggtttatttggctgaatatcctggtggctggaaagtctgagattgggcagcgcacatggtgaggggcttatgctgctccaactcctggcagaatgtggaaggggaaaccagcacaggcaaagagagcacacggcaagagaggaagcaagagggtccaggaagctgaactcacttctgtaaca i macFas5.chr6 I 16 C 0 s macNem1.NW_012020287v1 3823061 528 + 4899514 tattattattatta-tta---------Attttattttatttttttgagacagagtctcgctctgtcgcccaggctggagtgcagtggcgtgatctcagctcgctgcaagctccacctcccgggttcatgccattctcctgcctcagcctcccgagtagctgggactacaggcgcctgtcaccactcccagctaattgtttttgtatttttagtagagacggggtttcactgtgtt-----ggatggtctcaatctcctgacctcgtgatccacccaccttggcctcccaaagttgtgggattacaggcgtgagccaccacacccagccAagactgggtaatttatttaaacaaaaaaa-agaggtttatttggctgaatatcctggtggctggaaagtctgagattgggcagcgcacatggtgaggggcttatgctgctccaactcctggcagaatgtggaaggggaaaccagcacaggcaaagagagcacacggcaagagaggaagcaagagggtccaggaagctgaactcacttctgtaaca i macNem1.NW_012020287v1 I 16 C 0 s chlSab2.chr23 79681825 532 + 82825804 TATTATTATTAtta-tttttgtct---attttacttt-tttttttgagacagagtctcgctctgtcgcccaggctggagtgcagtggtgtgatctcagctcactgcaagctctgcctcccgggttcatgccattctcctgcctcagcctcctgagtagctgggactacaggcgcctgtcaccactcccagctaattttttttgtatttttagtagagacggggtttcactgtgtt-----ggatggtctcaatctcctgaccttgtgatccgcccaccttggcctcccaaagttgtgggattacaggcgtgagccgctgcaccgagccAagactgggtaatttatttaaacaaaaaa--agaggtttatttggctgaatatcctggtggctggaaagtctgagattgggcagcacacatggtgaggggcttatgctgctccaactcctggcagaatatggaaggggaaaccagcacaggcaaagagagcacacggcaagagaggaagcaagagggtccaggaagctgaactcacttctgtaaca i chlSab2.chr23 I 16 C 0 e cerAty1.NW_012001120v1 3546223 4696 - 3647740 I e colAng1.NW_012117422v1 126756 5186 - 815015 I e manLeu1.NW_012103876v1 1644261 7299 - 1768974 I a score=2740117.000000 s hg38.chr5_KI270795v1_alt 106455 909 + 131892 ccccacgcctggtaactcatccagtcccacgagacagcgttcatctattcatgaagggtctg-cccatcacccaaatacctcccactagcccccacctcccaccaccaccacatcgggaatcaaatttcaacatgtgttttggtggggacaaaccacatccacaccgtagcatacaccccaccctgtggggccatgctgctgtgtcctgcccctcccagttgctgtggcaccctagccgttggggcctgagctgatttgtgccctgctttccagagaatcaatgccttggtcagccagagaaatcacagtccctaatgcaagagctgaacaagtgcctcacttgatgggaagtccccaggctgagctgagACGGATGGaaaag-aaagctcctctaaataataaagtccgcctct-aaaaaacccacagctaacatcataatcaatggggaacaattgaaagtctttccactaagattgagttcaagacagggatgcctagccttgtcacttttattcaacatagtactggaagtactagcaagagcaattggac-------aaatttaaaaaaaggcaactaaaaaaagaaacaaattatctctatttgcagatgacatgatcc--atatgaaaaaacctcagatttcccataa-gaaaatgtt-aaaac---taaatgaattcagtaaagttgcagcatacaaactcaacatacaaaaatcaggagcgtttctatacacaaataacaatctagctgaaaaacaaatcaagaaaacaatcccatttacagtagcaccaatcaaaataaaatac-ttaggaataaatttagacaagaaggtgaaagactagtacactgaaaactataaaacaccgatgagagaaatttaagaatacacaaacaatgtaaaaacatcccacatttctg s panTro5.chr5 3433781 907 - 181907262 ccccacgcctggtaactcatccagtcccacgagacagcgttcatctattcatgaagggtctg-cccatcacccaaatacctcccactagcccccacctcccaccaccaccacatcgggaatcaaatttcaacgtgtgttttggtggggacaaaccacatccacaccgtagcatacaccccaccctgtggggccatgctgctgtgtcctgcccctcccagttgctgtggcaccctagcccttggggcctgagctgatttgtgccctgctttccagagaatcaacgccttggtcagccagagaaatcacagtccctaacgcaagagctgaacaagtgccccacttgatgggaagtcccctggcTGAGCTGAGACGGATGGaaaag-aaagctcctc----taataaaggccgcctct-gaaaaacccacagctaacatcataatcaatgaggaacaattgaaagtctttccactaagattgagttcaagacagggatgcctagccttgtcacttttattcaacatagtactggaagtactagcaagagcaattagac-------aaa-taaaaaaaaggcaactaaaaaaagaaataaattatctctatttgcagatgacatgatcc--atatgaaaaaacctcagatttcctataa-gaaaatgtt-aaaactaataaatgaattcagtaaagttgcagcatataaactcaacatacaaaaatcaggagcgtttctatacacaaataacaatctagctgaaaaacaaatcaagaaaacaatcccatttacagtagcaccaatcaaaataaaatac-ttaggaataaatttagacaagaaggtgaaaaactagtacactgaaaactataaaacactgatgagagaaatttaagaatacacaaacaatgtaaaaacatcccacatttctg i panTro5.chr5 C 0 C 0 s panPan2.chrUn_NW_014024182v1 12915 906 - 22698 ccccacgcctggtaactcatccagtcccacgagacagcgttcatctattcatgaagggtctg-cccatcacccaaatacctcccactagcccccacctcccaccaccaccacatcgggaatcaaatttcaacgtgtgttttggtggggacaaaccacatccacaccgtagcatacaccccaccctgtggggccatgctgctgtgtcctgcccctcccagttgctgtggcaccctagcccttggggcctgagctgatttgtgccctgctttccagagaatcaacgccttggtcagccagagaaatcacagtccctaatgcaagagctgaacaagtgccccacttgatgggaagtcccctggcTGAGCTGAGACGGATGGaaaag-aaagctcctc----taataaaggccgcctct-gaaaaacccacagctaacatcataatcaatgaggaacaattgaaagtctttccactaagattgagttcaagacagggatgcctagccttgtcacttttattcaacatagtactggaagtactagcaagagcaattagac-------aaa-taaaaaaaaggcaact-aaaaaagaaataaattatctctatttgcagatgacatgatcc--atatgaaaaaacctcagatttcctataa-gaaaatgtt-aaaactaataaatgaattcagtaaagttgcagcatataaactcaacatacaaaaatcaggagcgtttctatacacaaataacaatctagctgaaaaacaaatcaagaaaacaatcccatttacagtagcaccaatcaaaataaaatac-ttaggaataaatttagacaagaaggtgaaaaactagtacactgaaaactataaaacactgatgagagaaatttaagaatacacaaacaatgtaaaaacatcccacatttctg i panPan2.chrUn_NW_014024182v1 C 0 C 0 s gorGor5.CYUI01000356v1 86145 904 + 152767 ccccacgcctggtaactcatccagtcccacgagacagcgttcatctattcatgaagggtctg-cccatcacccaaatacctcccactagcccccacctcccaccaccaccacatcgggaatcaaatttcaacatgtgttttggtggggacaaaccacatccacaccgtagcatacaccccaccctgtggggccatgctgctgtgtcctgcccctcccagttgctgtggcaccctagcccttggggcctgagctgatttgtgccctgctttccagagaatcaatgccttggtcagccagagaaatcacagtccctaatgcaagagctgaacaagtgccccacttgatgggaagtcccctggcTGAGCTGAGACGGATGGaaaag-aaagctcctctaaataataaaggccgcctct-gaaaaacccacagctaacatcataatcaatggggaacaactgaaagtctttccactaagattgagttcaagacagggatgcctagccttgtcacttttattcaacatagtactggaagtactagcaagagcaattaaac-------aaattaaaaaaaaggcaactaaaaaaagaaacaaattatctctatttgcagatgacatgatcc--atatgaaaaaacctcagatttcccataa-gaaaatgttaaaaactaataaatgaattcagtaaagttgcagcatacaaactcaacatacaaaaatcaggagcgtttctatacacaaataacaatctagctgaa----aaatcaagaaaacaatcccatttacagtagcaccaatcaaaataaaatac-ttaggaataaatttagacaagaaggtgaaagactagtacactt-tcactataaaacaccgatgagagaaatttaagaatac----acaatgtaaaaacatcccacatttctg i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160333724 902 - 163208435 CCCCACGCCTGGTAactcatccagtcccacgagacagcattcatctattcatgaaggatctg-cccatcacccaaatacctcccactcgcccccacctcccaccaccaccacatcgggaatcaaatttcaacgtgtgttttggtggggacaagccacatccacaccgtagcatacaccccaccctgtggggccatgctgctgtgtcctccccctcccagttgctgtggcaccctagcccttggggcctgagctgatttgtgccctgctttctagagaatcaatgccttggccagccagagaaatcacagtccctaatgcaagagctgaagaagtgccccacttgatgggaagtcccctggcTGAGCTGAGACGGATGGaaaag-aaagctcccctacataataaaggccacctct--aaaaacccacagctaacatcataatcaatggggaacaattg--agtctttccactaagattgagttcaagacagggatgcctagccttgtcacttttattcaacatagtactggaagtactagcaagagcaattagac-------aaa----aaaaaaggcaactaaaaaaagaaataaattatctctaattgcagatgacatgatcc--atataaaataa-ctcagatttcccgtaa-gaaaatgtt-aaaactaataaatgaattcagtaaagttgcagcatataaa--caacatacaaaaatcaggagcatttctatacacaaataacgatctagctgaaaaacaaatcaagaaaacaatcccatttacggtagcaccaatcaaaataaaatac-ttaggaataaatttagacaagaaggtgaaagactagtacactgaaaactataaaacactcatgaaagaaatttaagaatacacaaaaaatgtaaaaacatcccacatttctg i nomLeu3.chr2 I 258 C 0 s rheMac8.chr6 3614963 913 - 180051392 ccccacgcctggtaactaatccagttccacaagacagcattaatctattcatgaaggatctgccccatcacccaaatacctcccactagcccccacctcccaccaccaccacactgggaattaaatttcaatgtgtgttttcgtgggtacaaaccacatctacaccgtagcatacaacccaccccatggggccatgctgttgtgtcct-cccctcccagttgctgtggcaccctaccccttggggcctgagctgatttgtgccctgctttctagagaatcaatgccttggccagccagagaaatcacagtccctaatgcaagagctgaagaagtgccccacttgaa-ggacgtcccctggctgagctaagACGGATggaaaagaaaagctcgtctacataataaaggccatctct-aaaaaacccacagctcacatcataatcaatggggaacaattgaaagcctttccactaagattgagttcaagacagggatgcctagccttgtcacttttattcaacatagtactggaagtactagcaagaaaaattagac-----aaaaa---aaaaaaaggcaactaaaaacagaaataaattatttctatttgcagatgacatgatcc--atataaaaaaaccccagattttccataaggaaaatgtt-aaaactaataaatgaattcagtaaagttgcaggatataaactcaagatacaaaaatcaggagcatttccctacacaaataataatctagctgaaaaacaaatcaagaaaacaatcccatttacagtagcaccaatcaaaataaaatactttaggaataaatttagacaagaatgtgaaagactagtacactgaaaactatgacacaccaatgagagaaatttaagaatacacaataaatggaaaaacatcccacatttctg i rheMac8.chr6 C 0 I 2019 s macFas5.chr6 3801668 912 - 181584905 ccccacgcctggtaactaatccagttccacgagacagcattaatctattcatgaaggatctgccccatcacccaaatacctcccactagcccccacctcccaccaccaccacactgggaattaaatttcaatgtgtgttttcgtgggtacaaaccacatctacaccgtagcatacaacccaccccatggggccatgctgttgtgtcct-cccctcccagttgctgtggcaccctaccccttggggcctgagctgatttgtgccctgctttctagagaatcaatgccttggccagccagagaaatcacagtccctaatgcaagagctgaagaagtgccccacttgaagggacgtcccctggctgagctgagACGGATggaaaagaaaagctcgtctacataataaaggccatctct-aaaaaacccacagctcacatcataatcaatggggaacaattgaaagcctttccactaagattgagttcaagacagggatgcctagccttgtcacttttattcaacatagtactggaagtactagcaagaaaaattagac-------aaa---aaaaaaaggcaactaaaaacagaaataaattatttctatttgcagatgacatgatcc--atataaaaaaaccccagattttccataaggaaaatgtt-aaaactaataaatgaattcagtaaagttgcaggatataaactcaagatacaaaaatcaggagcatttccctacacaaataataatctagctgaaaaacaaatcaagaaaacaatcccatttacagtagcaccaatcaaaataaaatactttaggaataaatttagacaagaatgtgaaagactagtacactgaaaactatgacacaccaatgagagaaatttaagaatacacaataaatggaaaaacatcccacatttctg i macFas5.chr6 C 0 I 1901 s macNem1.NW_012020287v1 3823589 914 + 4899514 ccccacgcctggtaactaatccagttccacgagacagcattaatctattcatgaaggatctgccccatcacccaaatacctcccactagcccccacctcccaccaccaccacactgggaattaaatttcaatgtgtgttttcgtgggtacaaaccacatctacaccgtagcatacaacccaccccatggggccatgctgttgtgtcct-cccctcccagttgctgtggcaccctaccccttggggcctgagctgatttgtgccctgctttctagagaatcaatgccttggccagccagagaaatcacagtccctaatgcaagagctgaagaagtgccccacttgaagggacgtcccctggctgagctgagACGGATggaaaagaaaagctcgtctacataataaaggccatctct-aaaaaacccacagctcacatcataatcaatggggaacaattgaaagcctttccactaagattgagttcaagacaggggtgcctagccttgtcacttttattcaacatagtactggaagtactagcaagaaaaattagac-------aaa---aaaaaaaggcaactaaaaacagaaataaattatttctatttgcagatgacatgatccatatataaaaaaaccccagattttccataaggaaaatgtt-aaaactaataaatgaattcagtaaagttgcaggatataaactcaagatacaaaaatcaggagcatttccctacacaaataataatctagctgaaaaacaaatcaagaaaacaatcccatttacagtagcaccaatcaaaataaaatactttaggaataaatttagacaagaatgtgaaagattagtacactgaaaactatgacacaccaatgagagaaatttaagaatacacaataaatggaaaaacatcccacatttctg i macNem1.NW_012020287v1 C 0 I 2000 s chlSab2.chr23 79682357 919 + 82825804 ccccactcctggtaactaatccagttccacgagacagcattaacctattcatgaaggatctgccccatcacccaaatacctcccactagcccccacctcccaccaccaccacacggggaattaaatttcaatgtgtgttttggtgggtacaaaccacatccacactgtagcaTACAAACCAccccgtggagccatgctgctgtgtcct-cccctcccagttgctgtggcaccctaccccttggggcctgagctgatttgtgccctgctttctagagaatcaatgccttggcgagccagagaaatcacagtccctaatgcaagagctgaagaagtgccccacttgaagggacgtcccctggctgagctgagACGGATggaaaagaaaagctcctctacataataaaggccacctctaaaaaaacccacagctcacatcataatcaatggggaacaactgaaaacctttccactaagattgagttcaagatagggatgcctagccttgtcacttttattcaccatagtactggaagtactagcaagaaaaattagaccaaaaaaaaa---aaaaaaaggcaactaaaaacagaaataaattatttctatttgcagatgacatgatcc--atataaaaaactcccagattttccataa-gaaaatgtt-aaaactaataaatgaattcagtaaagttgcaggatataaactcaagatacaaaaatcaggagcatttctgtacacaaataacaatctagctgaaaaacaaatcaagaaaacaatcccatttacagtagcaccaatcaaaataaaatactttaggaataaatttagacaagaatgtgaaagactagtacactgaaaactatgacacaccaatgagagaaatttaagaatacacaaaaaatggaaaaacatcccacatttctg i chlSab2.chr23 C 0 I 1904 e cerAty1.NW_012001120v1 3546223 4696 - 3647740 I e colAng1.NW_012117422v1 126756 5186 - 815015 I e manLeu1.NW_012103876v1 1644261 7299 - 1768974 I a score=206697.000000 s hg38.chr5_KI270795v1_alt 107364 246 + 131892 aattggaagaattaaaattgttaaaatggcatgctatccaaagcaaatatacagtttttaagacaatccctatcaaaattctaatcgcatttttcacagacatagaaaaatacaatcctgcaattgacatggaaccacaaaaaaccccaagctaacacaatacagaggaaaaaaattagtgctggaggcataacactacgtgatttaaaattacatacaaagctatagtaataagaacaatatatg s panTro5.chr5 3434688 244 - 181907262 aattggaagaattaaaattgttaaaatggcatactatccaaagcaaatatacag-ttttaagacaatccctatcaaaattctaatcgcatttttcacagacatagaaaaatacaatcctacaattcacatggaaccacaaaaaaccccaagctaacacaatacagagg-aaaaaattagtgttggaggcataacactacctgatttaaaattacatacaaagctatagtaataaaaacagtatatg i panTro5.chr5 C 0 C 0 s panPan2.chrUn_NW_014024182v1 13821 243 - 22698 aattggaagaattaaaattgttaaaatggcatactatccaaagcaaatatacag-ttttaagacaatccctatcaaaatt-taatcgcatttttcacagacatagaaaaatacaatcctacaattcacatggaaccacaaaaaaccccaagctaacacaatacagagg-aaaaaattagtgttggaggcataacactacctgatttaaaattacatacaaagctatagtaataaaaacagtatatg i panPan2.chrUn_NW_014024182v1 C 0 I 1507 s gorGor5.CYUI01000356v1 87049 243 + 152767 aattggaagaattaaaattgttaaaatggcatactatccaaagcaaatatacag-ttttaagacaatccctatcaaaattctaatcgcatttttcacagacatagaaaaatacaatcctgcaattgacatggaac--caaaaaaccccaagctaacacaatacagaggaaaaaacttagtgctggaggcataacactatgtgatttaaaattacatacaaagctatagtaataagaacaatatatg i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160334626 244 - 163208435 aattggaagaattaaaattgttaaaatggcatactatccaaagcaaatataaaa-ttttaagacaatccctatcaaaatcctaatagcatttttcacagacatagaaaaatacaatcctacaattcacatggaaccac-aaaaaccccaagctaacacaatacagagggaaaaaattaatgttggaggcataacactacctgatttaaaattacatacaaagctatagtaataaaaacagtatatg i nomLeu3.chr2 C 0 C 0 e cerAty1.NW_012001120v1 3546223 4696 - 3647740 I e macNem1.NW_012020287v1 3824503 2000 + 4899514 I e rheMac8.chr6 3615876 2019 - 180051392 I e macFas5.chr6 3802580 1901 - 181584905 I e colAng1.NW_012117422v1 126756 5186 - 815015 I e manLeu1.NW_012103876v1 1644261 7299 - 1768974 I e chlSab2.chr23 79683276 1904 + 82825804 I a score=5640.000000 s hg38.chr5_KI270795v1_alt 107610 6 + 131892 gtattg s panTro5.chr5 3434932 6 - 181907262 gtattg i panTro5.chr5 C 0 I 96397 s panPan2.chrUn_NW_014024182v1 15571 6 - 22698 gtattg i panPan2.chrUn_NW_014024182v1 I 1507 C 0 s gorGor5.CYUI01000356v1 87292 6 + 152767 gtattg i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160334870 6 - 163208435 gtattg i nomLeu3.chr2 C 0 C 0 e cerAty1.NW_012001120v1 3546223 4696 - 3647740 I e macNem1.NW_012020287v1 3824503 2000 + 4899514 I e rheMac8.chr6 3615876 2019 - 180051392 I e macFas5.chr6 3802580 1901 - 181584905 I e colAng1.NW_012117422v1 126756 5186 - 815015 I e manLeu1.NW_012103876v1 1644261 7299 - 1768974 I e chlSab2.chr23 79683276 1904 + 82825804 I a score=588441.000000 s hg38.chr5_KI270795v1_alt 107616 1146 + 131892 gcatcaaaacaaaaacatagaccaatggaacagaataagaagcctagaaataaatcaaaacatacactgtcaactaactttcaacaagagcaaccaagaggacacagtggaaaaaagacagtttcttcaataaatgatgctgtaaaactggattttcacaggccaaaccatgaaattgggcccttatcttacaccctatagaaaatcaactcaaactagataaaagacataaataagatatgaaaccatgaaactcctagaagagaatgtaggggacagccccctcgacgctggccttagcaatgatttttcagataatccaccaaaagccaggctgcatgcaaaagtcaacaaggaggaccgcatcaaactaaaacccttctgcgcagcaaaggaaacaatcaaaaaaaggcaacctacaaactgggaaaaatatttgcaagtcactaactgatcaagggctaatatccaaaatcaatgaagaacccttacaacttaagcagacaaataaccctgttaaaaagctaacaagagacctgaacagacatttctccaaagacgacaaaaacaatcagcaggAAGTGGGGAGATGAAGGCCAAAACACGCAAAGTAGCAGACGTCGGATGAACAAGGCCAGAGACCTAATGTATAACATGAGGACACTGTCTTGGGATTtttgttgagtaagtagattttcgctgcccttgacacaca-aaaaagtacctatgtgagatggtaggtatgtgaacttgctgactatagtaaccattttactactgacgtgtacctttgacatcatgctgtc-acctcaaatatacacagtaacatttagttttaaaaaagaaaAGTTTggccaggagtggtgactcatgcctgtaatcccagcacgttgggaggctgaggtgggtgaatcaacctgaggtcaggcgtttgagaccagcctggccaacatggtgaaaccccgtctctacggaaaatacaaaaattagccgggtgtggtggtggatgcccgtaatcgcagttattcaggaggctgaggcaggagaagtgcttaaccccgggaggcagaggttgcagtgggctgagattgcgccgccgctctccagcctgggtgacag-agtgaaactccatcttgaaaaaagaaa- s panPan2.chrUn_NW_014024182v1 15577 1141 - 22698 gcattaaaacaaaaacatagaccaatggaacagaataagaagcctagaaataaatcaaaacatatactgtcaactaattttcgacaagagcaaccaagaggacacagtggaaaaaagacagtttcttcaacaaatgatgctgtgaaactggattttcacaggcaaaacaatgaaattgggcccttatcttacaccctatagaaaatcaactcaaactagataaaagacataaataagatatgaaaccatgaaactccttgaaaagaacgtaggggacagcccccttgacgctggccttagcaatgatttttcagataacccaccaaaagccaggctacatgcaaaagtcaacaaggaggactacatcaaactaaaacacttctgcgcagcaaaggaaacaatcaaaaaaaggcaacctacaaactgggaaaaatatttgcaagtcactaactgatcaagggctaatatccaaaatcaatgaaaaacccttacaacttaagca----aataaccctgttaaaaagctaacaagagacctgaacagacatttctccaaagacgacaaaaacaatcagcaggaagtggggagatgaaagccaaaacacgcaaagtagcagacgtcagatgaacaaggccagagacctaatgtataacataaggacactgtcttgggatttttgttgagtaagtagattttcgctgcccttgacacaca-aaaaagtacctatgtgagatggtaggtatgtgaacttgctgactatagtaaccattttactactgacgtgtacctttaacatcatgctgtc-acctcaaatatacacagtAACATTTAGTTTTAAAAAAGAA--GTTTggccaggagtggtggctcatgcctgtaatcccagcacgttgggaggctgaggtgggtgaatcaacctgaggtcaggcgtttgagaccagcctggccaacatggtgaaaccccatctctacggaaaatacaaaaattagccgggtgtggtggtggatgcctgtaatcgcagttattcaggaggccgaggcaggagaattgcttaaccccgggaggcagaggttgcagtgagctgagattgcgccgctgctctccagcctgggcaacagcagtgaaactccatcttgaagaaaaaaa- i panPan2.chrUn_NW_014024182v1 C 0 C 0 s gorGor5.CYUI01000356v1 87298 1142 + 152767 gcatcaaaac-aaaacatagaccaatggaacagaataagaagcctagaaataaatcaaaacatacactgtcaactaactttcaacaagagcaaccaagaggacacagtggaaaaaagacagtttcttcaataaatgatgctgtgaaactggattttcacaggcaaaaccatgaaattgggcccttatcttacaccctatagaaaatcaactcaaactagat-aaagacataaataagatatgaaaccatgaaactcctagaagagaacgtaggggacag-ccccttgatgctggccttagcaacgatttttcagataaccca-caaaagccaggctacatgcaaaagtcaacaaggaagactgcatcaaactaaaacacttctgcgcagcaaaggaaacaatcaaaaaaaggcaacctacaaactgggaaaaatatttgcaagtcactaactgatcaagggctaatatcc-aaatcaatgaagaacccttacaacttaagcagacaaataaccctgttaaaaagctaacaagagacctgaacagacatttctccaaagacgacaaaaacaatcagcaggAAGTGGGGAGATGAAGGCCAAAACACGCAAAGTAGCAGACGTCGGATGAACAAGGCCAGAGACCTAATGTATAACATAAGGACACTGTCTTGGGATTtttgttgagtaagtagatttttgctgcccttgacacaca-aaaaagtacctatgtgagatggtaggtatgtgaacttgctgactatagtaaccattttactactgacgtgtacctttaacatcatgctgtc-acctcaaatatacacagtaacatttagttttaaaaaagaaaAGTTTggccaggagtggtggcttatgcctgtaatcccagcacgttgggaggctgaggtgggtgaatcaacctgaggtcaggcgtttgagaccagcctggccaacatggtgaaaccccatctctacggaaaatacaaaaattagccgggtgtggtggtggatgcccgtaatcgcagttattcaggaggttgaggcaggagaattgcttaaccccgggagacagaggttgcagtgagctgagattgcgccgctgctctccagcctgggcaacagcagtgaaactccatcttgaaaaaaaaaa- i gorGor5.CYUI01000356v1 C 0 I 309 s nomLeu3.chr2 160334876 1141 - 163208435 gcatcaaaacgaaagcatagaccaatggaacagcataggaagcctagaaataaatcaaaacatatactgtcaactaattttcaacaagagcaaccaagaggacacagtggaaaaaagacagtttcttcaagaaatgatgctatgaaactggattttcacaggcaaaacaatgaaattgggcccttatcttacatcctatagaaaatcaactcaaactggataaaagac----ataagatatgaaaccataaaactcctagaagagaacgtaggggacagcccccttgacgttggccttagcagtgatttttcagataacccaccgaaagccaggctacatgcaaaagtcaacaaggagggttacatcaaacgaaaacacttgtgcacagcaaaggaaac---caaaaaaaggcaacctacaaactgggaaaaatatttgcaagtcactaactgatcaactgccaatatccaaaatcaatgaacaacgcttacaacttaagcagacaaataaccctgttaaaaagctaacaagagacctgaacagacatttctccaaagacgacaaaaacaatcagcaggAAGTGGGGAGATGAAGGCCAAAACACGCAAAGTAGCAGACGTCGGATGAACAAGACCAGAGACCTAATGTATAACACGAGGACACTGTCTTGGGATTtttgctgaattagtagattttcgctgccc-cgacacacacaaaaagcacctatgtgagacggtaggtatgtgaacttgctgactctaataaccattttactattgacgtgtacctttaacatcatgccgtcaacctcaaatagacacaGGAACATTTAGTTTTAAAAAAGAAGAGTTTggccaggagtggtggctcatgcctgtaatcccagcacgttgggaggctgaggtgggtgaatc-acctgaggtcaggcgttcgagaccagcctggccaacatggtgaaaccccatctctacagaaaatacaaaaattagccgggtgtggtggtggatgcctgtaatcgcagttattcaggaggctgaggcaggagaattgctagaccccgggaggcagaggttgcaatgagctgagattgcgccactgcactccagcctgggcaacaggagtgaaactccatcttggaaaaaaaaaa i nomLeu3.chr2 C 0 C 0 e cerAty1.NW_012001120v1 3546223 4696 - 3647740 I e macNem1.NW_012020287v1 3824503 2000 + 4899514 I e rheMac8.chr6 3615876 2019 - 180051392 I e macFas5.chr6 3802580 1901 - 181584905 I e colAng1.NW_012117422v1 126756 5186 - 815015 I e manLeu1.NW_012103876v1 1644261 7299 - 1768974 I e chlSab2.chr23 79683276 1904 + 82825804 I e panTro5.chr5 3434938 96397 - 181907262 I a score=76.000000 s hg38.chr5_KI270795v1_alt 108762 7 + 131892 caaaaaa- s panPan2.chrUn_NW_014024182v1 16718 5 - 22698 --aaaaa- i panPan2.chrUn_NW_014024182v1 C 0 C 0 s nomLeu3.chr2 160336017 7 - 163208435 -aaaaaaa i nomLeu3.chr2 C 0 C 0 e cerAty1.NW_012001120v1 3546223 4696 - 3647740 I e macNem1.NW_012020287v1 3824503 2000 + 4899514 I e rheMac8.chr6 3615876 2019 - 180051392 I e macFas5.chr6 3802580 1901 - 181584905 I e colAng1.NW_012117422v1 126756 5186 - 815015 I e manLeu1.NW_012103876v1 1644261 7299 - 1768974 I e chlSab2.chr23 79683276 1904 + 82825804 I e gorGor5.CYUI01000356v1 88440 309 + 152767 I e panTro5.chr5 3434938 96397 - 181907262 I a score=396358.000000 s hg38.chr5_KI270795v1_alt 108769 778 + 131892 GTTGGCGGGGGGCGGAGCTCGGCGGAGAC-------GGGAAGGGGTCGCCGTGGCTGCCGCTCCTCGAGTTGGGGGCCCCCTCGGACACCGCCAGGCAGACGGCGAGTACCGAGCGTGGGTGGCCGCGGTGTCCGTGGGCCACGCTCAGCTGCGGTCAGAGGCGACATGAGCGCCGCGGGGCTGCTGGCCCCGGCCCCGCCCGGGCTGGAGCG-------TCCCCGG------------GGAGGACGAAGAGCTGGAGAGCGCCAAGGACGACGAGCGCAGCTGCCGGGCCGCGAGTCGGACGAAGACACTGAGGATGCTAGTGAAACTGACCTGGCAAAGCATGATGAAGAAGACTATGGGGAAGTGAAGGAACAGATGTATCAGGACAAACTGGCTTCTCTCGAGAGGCAGTTGCAACAACTACAAGAAGGTACATTACAGGAATATCAGAAGAGAATGAAAAAACTAGGTCAGCAGTACAAAGAGAGGATACGGAATGCTGAACTCTTCCTCCAGCTGGAAACTGAACAAGTGGGACGAAATTACATGAAAGAAAAGAAGGCAGCAGTGAAAGAATTTGAAGACAAGAAGGTTGAGCTGAAAGAGAACC-TGATTGCTGAGCTAGCAGAAGAGAAGAAAATGATTGAAAACGAAATGCTGACAATGGAACTGAATGGAGATTCTATGCAGGTGAGACCTATCATGACCAGAAAGTTGCGGAGGCGACCAAATGATCCCGTCCCCATCCCAGACAAGAGGAGGAAACCTGCTCCAGCCCAGCTAAACTATTTGTTAACAGATG s panPan2.chrUn_NW_014024182v1 16723 780 - 22698 GTTGGCGGGGGGCGGAGCTGGGCGGAGA------------AGGGGTCGCCGTGGCTGCCGCTCCTCGAGTTGGGGGCTCCCTCGGACACTGCCAGGCAGACGGCGAGTACCGAGCGTGGGTGGCCGCGGTGTCCGTGGGCCACGCTCAGCTGCGGTCAGAGGCGACACGAGCGCCGCGGGGCTGCTGGCCCCGGCCCCGCCCAGGTGGGGGCGCCGCCGGTCCCCGA------------GGAGGACGAAGAGCTGGAGAGCGCCAAGGACGACCAGCGCAGCTGCCGGGCCGCGAGTCGGACGAAGACACCGAGGATGCTAGTGAAACTGACCTGGCAAAGCATGATGAAGAAGACTATGTGGAAGTGAAGGAACAGATGTATCAGGACAAACTGGCTTCTCTCAAGAGGCAGTTGCAACAACTACAAGAAGGTACATTACAGGAATATCAGAAGAGAATGAAAAAACCAGGTCAGCAGTACAAAGAGAGGATACGGAATGCTGAACTCTTCCTCCAGCTGGAAACTGAACAAGTGGGACGAAATTACATGAAAGAAAAGAAGGCAGCAGTGAAAGAATTTGAAGACAAGAAGGTTGAGCTGAAAGAGAACC-TGATTGCTGAGCTAGCAGAAGAGAAGAAAATGGTTGAAAACGAAAAGCTGACAATGGAACTGAATGGAGATTCTATGCAGGTGAGATCTATCATGACCGGAAAGTTGCGGAGGCGACCACATGATCCCGTCCCCATCCCAGACAAGAGGAGGAAACCTGCTCCAGCCCAGCTAAACTATTTGTTAACAGATG i panPan2.chrUn_NW_014024182v1 C 0 C 0 s gorGor5.CYUI01000356v1 88749 791 + 152767 GTTGGCGGGGGGCGGAGCTCGGCGGAGACGGGGAAGGGGAAGCGGTCGCCGTGGCTG-CGCTCCTCGAGCTGGGGGCTCCCTCGGACACTGCCAGGCAGACGGCGAGTACCGAGCGTGGGTGGCCGCGGTGTCCGTGGGCCACGCTCAGCTGCGGTCAGAGGCGACATGAGCGCCGCGGGGCTGCTGGCCCCGGCCCCGCCCAGGCTGGAGCGCCGCCGGTCCCCGA------------GGAGGACGAAGAGCTGGAGAGCGCCAAGGACGACCAGCGCAGCTGCCGGGCCGCGAGTCGGACGAAGACACTGAGGATGCTAGTGAAACTGACCTGGCAAAGCATGATGAAGAAGACTATGGGGAAGTGAAGGAACAGATGTATCAGGACAAACTGGCTTCTCTCAAGAGGCAGTCGCAACAACTACAAGAAGATACATTACAGGAATATCAGAAGAGAATGAAAAAACGAGGTCAGCAGTACAAAGAGAGGATACGGAATGCTGAACTCTTCCTCCAGCTGGAAACTGAACAAGTGGGACGAAATTACGTGAAAGAAAAGAAGGCAGCAGTGAAAGAATTTGAAGACAAGAAGGCTGAGCTGAAAGAGAACC-TGATTGCTGAGCTAGCAGAAGAGAAGAAAATGATTGAAAACGAAAAGCTGACAATGGAACTGAATGGAGATTCTATGCAGGTGAGACCTATCATGACCAGAAAGTTGCGGAGGCGACCAGATGATCCCGTCCCCATCCCAGACGAGAGGAGGAAACCTGCTCCAGCCCAGCTAAACTATTTGTTAACAGATG i gorGor5.CYUI01000356v1 I 309 C 0 s nomLeu3.chr2 160336024 770 - 163208435 GTTGGCGGGGGGCAGAGGTCGGCGGAGAC------GGGGAAGGGGTCGCCGAGGCTGCCGCTCCTAGAGTTGGGGGCTCCCTCGGACACTGCCAGGCAGACGGCGAGTACCGAGCGTGGGTGGCCGCGATGTCCGTGGACCCCGCTCAGCTGCGGTCAGAGGCGACATGAGTGTCGCGGGGCTGCCGGCCCCGGCCCC-----AGCTGGAGCACCGCGGGTCCCCGAGTACTACCCCGGGGAGGACGAAGAGCTGGAGAGCGCCAAGAACGACGAGCGCAGCTGTCAGGCCGCGAGTCGGACGAAGACACTGATGATGCTAGTGAAACTGACCTGGCAAAGCATGATGAAGGAGACTATGCGGAAGTGAAGGAACAGATGTATCAGGACGAACTGGCTTCTCTCAAGAGG-----------------------TACATTACAGGAATATCAGAAGAGAATGAAAAAACTAGGTCAGCAGCACAAAGAGAGGATACGGGATG-TGAACTCTTCCTCCAGCTGGAAACTGAACAAGTGGAACGAAATTACATGAAAGAAAAGAAGGCAGCAGTGAAAGAATTTGAAAACAAGAAGGTTGAGCTGAAAGAGAACCGTGATTGCTGAGCGAGAAGAAAAGAAGAAAATGATCGAAAACGAAAAGCTGACAATGGAACCGAATGGAGATTCTGTGGAGGTGAGACCTATCATGACCGGAAAGTTGCGGAGGCGACCACATGATCCCGTCCCCATCCCAGACAAGAGGAGGAAACCTGCTCCAGCCCAGCTAAACTATTTGTTAACAGATG i nomLeu3.chr2 C 0 I 301 e cerAty1.NW_012001120v1 3546223 4696 - 3647740 I e macNem1.NW_012020287v1 3824503 2000 + 4899514 I e rheMac8.chr6 3615876 2019 - 180051392 I e macFas5.chr6 3802580 1901 - 181584905 I e colAng1.NW_012117422v1 126756 5186 - 815015 I e manLeu1.NW_012103876v1 1644261 7299 - 1768974 I e chlSab2.chr23 79683276 1904 + 82825804 I e panTro5.chr5 3434938 96397 - 181907262 I a score=986899.000000 s hg38.chr5_KI270795v1_alt 109547 1883 + 131892 AACAGATCATGGAGGATCTGAGAACATTAAATAAGCTTAAGTCACCCAAGAGACCAGCATCTCCATCCTCTCCTGAGCACTTGCCTGCGACACCCGCGGAATCTCCAGCCCAGAGGTTTGAAGCTCGGATAGAAGATGGCAAACTGCACTATGACAAAAGATGGTACCACAAGAGCCAGGCCATCTATCTGGAGTCAAAGGACAACCAGAAACTGAGCTGCGTGATCAGTTCTGTAGGAGCCAATGAGATCTGGGTGAGGAAGACAAGTGACAGCACCAAGATGAGGATCTACCTGGGCCAGCTTCAGCGCGGGCTCTTCGTCATCCACCGGCGCTCAGCTGCTTGACTTTCTACAGTGCTCTTCTCTTGACCCTTTTTCTGGAGTGGgttttatttttgttttgtt----------ttgttttcttCTTAACAGAAAAATGTTAACTTACTGGGAGTAGCTACTCAGCCTTAGAAATGGAGAGCATTGTAGTGGATTCTTTAAGGCACTTTTGTGGCCAGCCCCTTCCAACTTCCTCAGTCTTTTCTGCCTCAACTTCTTCCAGACATCAGTCACCATGAGACTGTTTTACTTTCAGGAGTA-TTGGGGGGTTTGATTTACTTTCCTTTTATTTCTTTG-TTTTTTGCTTATACTTGTTTTTGAAAACCTCCTCTGAGTTTGAAGGGACAGCTATTTTTATTAATTATCTTTAAGTCTCTCTGCCATGGAGAAGAGCAGGAAGGCATACACTGTCCAGTGCATTTTCATTAGTGGATCACGTAGCTACTTTCCCTGTCGAGTCCAATTCACTATTTCCTCAGAAGCTTGGGGCAGAGGTCCTAGCAGAAGGAGATGAATTCTCCTGGCTCTCAGCCTTCTTGGAGAAATAAATGCTTTGTGTAACATCTGGCGCATGCCATCCATTCCACTGGCTGAGCGATGGAAAAGCTTGCCTGGGAGACTCTGTGCACTGAAGTAAATGGGGTTGGGGGAGGGGACATTTCATATTTATAATGTGCTGAAGGTACCATATTTTAAATGTTATTTAATGC-GGTGATTTATTCAAACATTTATTCTAGCTTAAGCTGGAATAAGAAGTGGTCATTTCAGAAGTTTTCATTTGTAATTCCTTCCTCTCCCTTGTTCCCAAGTAGGTAGTAGTAGTATGTGCCACAGGCTGATTATCTGGGTAATCTCTTGTGGGTGGGAGGTGAGATTGATAGTGCAGTAATCAGTGATCTATAGACCCGCATGCACGATTCAAGTTTCACTCTTGTGGCTGATGCCATCATTGCACATTGGCCATTCCAAACCTGCGGAGAACTTTGTTGTCAGGCCCTCAGCACTCAGAGCTTCATTTGGCCCAGGTTGAAGACAAGGAAAGCTCTGCCGTGGCTGCCTCTGCACTGACACCCTCCCTAATGAGTCCTGATGAAACAGCCTTTCCTACATCCTTCCCTCATTCCCATGATTGGAGAAATGATTCATTGGGTGATGAGTGTTGGGGTTTTCCATACTCATGTTGCCATCTTGAGATGTTTAAAAAATTTGGGGTTAGAGCAACTGTTAGCGTCTCCATGGGCAATCAGTAGAACTTACACATTCCAGGAAATCTTTCTTTGTAAGTAATTCTTTTGGTCTCAAGTGATTCCCTTCAAGTTGTCTCTTGATGTACAAACCCCAAAGCAAGTT-GGGGGGCTGTGATGACAATTAAATCACCTTCTCTGAAGTTCTGGCTCTACAGAGACCAGAACTTACTGACTTGTGCAGACTTGTACAGGTAAAGACTTATACAGATAGATTTTTGTTTTAACTTATAATCTGTTTTTTCCTC-TTTTTTTTTTTTCTGGTGTTGGAGTCTTATTTAGAAAACAGGATAAATGACGCTGTTAT- s panPan2.chrUn_NW_014024182v1 17503 1877 - 22698 AACAGATCATGGAGGATCTGAGAACATTAAATAAGCTTAAGTCACCCAAGAGACCAGCATCTCCATCCTCTCCTGAGCACTTGCCTGCGACACCCGCGGAATCTCCAGCCCAGAGGTTTGAAGCTCGGATAGAAGATGGCAAACTGTACTATGACAAGAGATGGTACCACAAGAGCCAGGCCATCTATCTGGAGTCAAAGGACAACCAGAAACTGAGCTGCGTGATCAGTTCTGTAGGAGCCAATGAGATCTGGGTGAGGAAGACAAGTGACAGCACCAAGATGAGGCTCTACCTGGGCCAGCTTCAGCGTGGGCTCTTTGTCATCCGCCGGCGCTCAGCTGCTTGACTTTCTACAGTGCTCGTCTCTTGACCC-TTTTCTGGAGTGGGTTTTATTTTTGTTTTGTT-------------TTTTCCTCTTAACAGAAAAATGTTAACTTACTGGGAGTAGCTACTCAGCCTTAGAAATGGAGAGCACTGTAGTGGATTGTTTAAGGCACTCTTGTGGCCAGCCACTTCCAACTTTGTCAGTCTTTTCTGCCTCAACTTCTTCCAGACATCAGTCACCATAAGACTGTTTTACTTTCAGGAGTA-TTGGGGGGTTTGATTTACTTTCCTTTTATTTCTTTATTTTTTTGCTTATACTTGTTTTTGAAAACCTCCTCTGAGTTTGAAGGGACAGCTATTTTTATTAATTATCTTTAAGTCTCTCTGCCATGGAGAAGAGCAGGAAGGGATACACCGTCCAGTGCATTTTCATTAGTGGATCACATAGCTACTTTCCCTTTCGAGTCCAATTCACTATTTCCTCAGAAGCTTGGGGCAGAGGTCCTAGCAGAAGGCGATGAATTCTCCTGGCTCTCAGCCTTCTTGAAGAAATAAATGCTTCGTGTAACATCTGGTGCATGCCATCCATTCCACTGGCTGAGCGATGGAAAAGCTTGCCTGGGAGACTCTGTGCACTGAAGTAAATGGGGTTGGGGGAGGGGACATTTCATATTTATAATGTGCTGAAGGTACCATATTTTAAATGTTATTTAATGC-GGTGATTTATTCAAACATTTATTCTAGCTTAAGCTGGAATAAGAAGTGGTCATTTCAGAAGTTTTCATTTGTAGTTCCTTCCTCTCCCTTGTTCCCAAATAGGTAGTAGTAGTATGTGCCACAGGCTGATTATCTGGGTAATCTCTTATGGGTGGGAGGTGAGATTGATAGTGCAGTAATCAGTGATCTATAGACCCTCATGCACGATTCAAGTTTCACTCTTGTGGCTGATGCCATCATTGCACATTGGCCATTCCAAACCTGCGGAGAACTTTGTTGTCAGGCCCTGAGCACTCAGAGCTTCATTTGGCCCAGGTTGAAGACAAGGAGAGCTCTGCCGTGGCTGCCTCTGCACTGACACCCTCCCTGATGAGTCCTGATGAAACAGCCTTTCCAACATCCTTCCCTCATTCCCATGATTGCAGAAATGATTCA-TGGGTGATGAGTGTTGGGGTTTTCCACACTCATGTTGCCATCTTGAGATGTTTAAAAAATTTGGGGTTAGAGAAACTGTTAGCATCTCTATGGGCAATCAGTAGAACTTACACATTCTAGGAAATATTTCTTTGTAAGTAATTCTTTTGGTCTCAAGTGATTCCCTTCAAGTTGTCTCTTGATGTACAAACCGCAAAGCAAGCT-GGGGGGCTGTGATGACAATTAAATCACCTTCTCTGAAGTTCTGGCTCTACAGAGACCAGAACTTACTGACTTGTACAGACTTGTACAAGTAAAGACTTATACAGATAGATTTTTGTTTTAACTTATAATCTGTTTTTTCCTC---TTTTTTTTTTCTGGTGTTGGAGTCTTATTTAGAAAACAGGATAAATGACGCTGTTAT- i panPan2.chrUn_NW_014024182v1 C 0 C 0 s gorGor5.CYUI01000356v1 89540 1882 + 152767 AACGGATCATGGAGGATCTGAGAACATTAAATAAGCTTAAGTCACCCAAGAGACCAGCATCTCCATCCTCTCCTGAGCACTTGCCTGCGACACCCGCGGAATCCCCAGCCCAGAGGTTTGAAGCTCGGATAGAAGACGGCAAATTGTACTATGACAAGAGATGGTACCACAAGAGCCAGGCCATCTATCTGGAGTCAAAGGACAACCAGAAACGGAGCTGCGTGATCAGTTCTGTAGGAGCCAATGAGATCTGGGTGAGGAAGACAAGTGACAGCACCAAGATGAGGATCTACCTGGGCCAGCTTCAGCGCGGGCTCTTCGTCATCCGCCGGCGCTCAGCTGCTTGACTTTCTACAGTGCTCTTCTCTTGACCCTTTTTCTGGAGTGGGttttatttttgttttgtt---------tttgttttcttcttAACAGAAAAATGTTAACTTACTGGGAGTAGCTACTCAGCCTTAGAAATGGAGAGCATTGTAGTGGATTCTTTAAGGCAGTTTTGTGGCCAGCCCCTTCCAACTTCGTCAGTCTTTTCTGCCTCAACTTCTTCCAGACATCAGTCACCATGAGACTGTTTTACTTTCAGGAGTA-TTGGGGGGTTTGATTTACTTTCCTTTTATTTCTTTA-TTTTTTGCTTATACTTGTTTTTGAAAACCTCCTCTGAGTTTGAAGGGACAGCTATTTTTATTAATTATCTTTAAGTCTCTCTGCCATGGAGAAGAGCAGGAAAGGATACACTGTCCAGTGCATTTTCATTAGTGGATCACGTAGCTACTTTCCCTGTCGAGTCCAATTCACTATTTCCTCAGAAGCTTGGGGCAGAGGTCCTAGCAGAAGGAGATGAATTATCCTGGCTCTCAGCCTTCTTGGAGAAATAAATGCTTTGTGTAACATCTGGTGCATGCCATCCATTCCACTGGCTGAGCGATGGAAAAGCTTGCCTGGGAGACTCTGTGCACTGAAGTAAATGGGGTTGGGGGAGGGGACATTTCATATTTATAATGTGCTGAAGGTACCATATTTTAAATATTATTTAATGC-GGTGATTTATTCAAACATTTATTCTAGCTTAAGCTGGAATAAGAAGTGGTCATTTCAGAAGTTTTCATTTGTAATTCCTTCCTCTCCCTTGTTCCCAAGTAGGTAGTAGTAGTATGTGCCACAGGCTGATTATCTGGGTAATCTCTTATGGGTGGGAGGTGAGATTGATAGTGCAGTAATCAGTGATCTATAGACCCTCATGCACGATTCAAGTTTCACTCTTGTGGCTGATGCCATCATTGCACATTGGCCATTCCAAACCTGCGGAGAACTTTGTTGTCAGGCCCTGAGCACTCAGAGCTTCATTTGGCCCAGGTTGAAGACAAGGAAAGCTCTGCCGTGGCTGCCTCTGCACTGACACCCTCCCTAATGAGTCCTGATGAAACAGCCTTTCCTATATCCTT-CCTCATT-CCATGATTGGAGAAATGATTCATTGGGTGATGAGTGTTGGGGTTTTCCATACTCATGTTGCCATCTTGAGATGTTTAAAAAATTTGGGGTTAGAGCAACTGTTAGCGTCTCTATGGGCAATCAGTAGAACTTACACATTCCAGGAAATCTTTCTTTGTAAGTAATTCTTTTGGTCTCAAGTGATTCCCTTCAAGTTGTCTCTTGATGTACAAACCCCAAAACAAGTTGGGGGGGCTGTGATGACAATTAAATCACCTTCTCTGAAGTTCTGGCTCTACAGAGACCAGAACTTACTGACTTGTACAGACTTGTACAAGTAAAGACTTATACAGATAGATTTTTGTTTTAACTTATAATCTGTTTTTCCCTG--TTTTTTTTTTTCTGGTGTTGGAGTCTTATTTAGAAAACAGGATAAATGATGCTGTTAT- i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160337095 1890 - 163208435 aaCAGATCATGGAGGATCTAAGAACATTAAATAAGCTGAAGTCACCCAAGAGACCAGCATCTCCATCCTCT-CTGAGCACTTGCCTGCGACACGCGCGGAATCTCCAGCCCAGAGGTTTGAAGCTCGGATAGAAGATGGCCAACTGTACTATGACAAAAGACGGTACCACAAGAGCCAGGCCATCTATCTGGAGTCAAAGGACAACCAGAAACTGAGCCGCGTGATCAGTTCTGTAGGAGCCAATGAGATCTGGGTGAGGAAGACAAGTGACAGCACCGAGATGAGGGTCTACCTGGGCCAGCTTCAGCGCGGGCTCTTCATCATCCGCCGGCGCTCAGCTGCTTGGCTTTCTACAGTGCTCTTCTCTTGACCCTTTTTCTGGAGTGGgttttagttttattttgttttgttttgttttgttttCTTCTTAATAGAAAAATGTGAACTTCCTGGGAATAGCTACTCAGCCTTGGAAATGGAGTGCACTGTCGTGGATTCTTTAAGGCACTTTTGTGGCCGGCCACTTCCAGCTTTGTCAGTCTTTTCTGCCTCAACTTCGTCCAGACGTCAGTCACCATGAGACTGTTTTACTTTCAGGAGTATTTGGGGGGGTTGATTTACTTTCCTTTTATTTATTTA-TTTTTTGCTTGTACTTGTTTTTGAAGACTTCCTCTGAGTTTGAAGGGACAGCTATTCTTATTAATTATCTTTAAGTCTCTCTGCCATGGAGAAGAGCAGGAAGGGGTCCACTGTCCTGTGCATTTTCATTAGTGGATCACGTAGCTACTTTCCCTGTCGGGTCCAATTCACTATGTCTCCAGAAGCTTGGGGCAGAGGTCCTAGCAGAAGGAGATGAATTCTCGTGGCTCTCAGCCTTCTTGGAGAAATAAATGCTTTGTGTAACATCTGGCGCACGCCATCCATTCCACTGGCTGAGCGATGGAAAAACTTGCCTGGGAGACTCTGTGCACTGAAGTAAATGGGGTTGGGAGAGGGGACATTTCATATTTATAATGTGCTGAAGGTACCATATTTTAAATGTTATTTAATGCAGGTGATTTATTCAAACATTTGTTCTAGCTTAAGCTGGAATAAGAAGTGGTCATTTCAGAAGTTTTCATTTGTAATTCCTTCCTCTCCCTTGTTCCCAAGTAGGTAGTAGTAGTATGTGCCACAGGCTGATTATCTGGGTAATCTCTTATGGGTGGGAGGTGAGATTGATAGTGCAATAATCAGTGATCTATAGACCCTCATGCACGATTCAAGTTTCACTCTTGTGGCTGATGCCATTATTGCACATTGGCCATTCCAAACCTGCAGAGAACTTTGTTGTCAGGCCCTGAGGACTTAGAGCCTCATTTGGCCCAGGCTGAAGACAAGGAAAGCTCTGCCGTGGCTGCCTCTGGACTCCACCCCTCCCTAACGAGTCCTGATGAAACAGCCTTTCCTACATCCTTCCCTCATTCCCATGATTGGAGAAATGATTCATTGGGTGATGAGTGTTGGGGTTTTCTATACTCATGTTGCCATCTTGAGATGTTTAAAAAATTTGGGGTTAGAGCAACTGTTAGCGTCTCTATGAGCAATCAGTAGA------ACATTCTAGGAAATCTTTCTTTGTAAGTAATTCTTTTGGTCTCAAGTGATTCTCTTCATGTTGTCTCTTGATGTACAAACCCCCAAGCAAGTT-GGGGGGCTGTGATGACAATTAATTCACCTTCTCTGAAGTTCTGGCTCTACAGAGACCAGACGTTACTGACTTGTACAGACTTGCACAAGTAAAGACTTACACAGATAGATTTTTGTTTTAACTTATAATCCGTTTTTTCCTCTTTTTTTTTTTTTCTGGTGTTGGTGTCTTATTTAGAAAACAGGATAAATGATGCTGTTATA i nomLeu3.chr2 I 301 C 0 e cerAty1.NW_012001120v1 3546223 4696 - 3647740 I e macNem1.NW_012020287v1 3824503 2000 + 4899514 I e rheMac8.chr6 3615876 2019 - 180051392 I e macFas5.chr6 3802580 1901 - 181584905 I e colAng1.NW_012117422v1 126756 5186 - 815015 I e manLeu1.NW_012103876v1 1644261 7299 - 1768974 I e chlSab2.chr23 79683276 1904 + 82825804 I e panTro5.chr5 3434938 96397 - 181907262 I a score=1336.000000 s hg38.chr5_KI270795v1_alt 111430 2 + 131892 AA s gorGor5.CYUI01000356v1 91422 1 + 152767 -A i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160338985 2 - 163208435 AA i nomLeu3.chr2 C 0 C 0 s macFas5.chr6 3804481 2 - 181584905 aa i macFas5.chr6 I 1901 C 0 s cerAty1.NW_012001120v1 3550919 2 - 3647740 aa i cerAty1.NW_012001120v1 I 4696 C 0 e macNem1.NW_012020287v1 3824503 2000 + 4899514 I e rheMac8.chr6 3615876 2019 - 180051392 I e colAng1.NW_012117422v1 126756 5186 - 815015 I e manLeu1.NW_012103876v1 1644261 7299 - 1768974 I e chlSab2.chr23 79683276 1904 + 82825804 I e panPan2.chrUn_NW_014024182v1 19380 0 - 22698 C e panTro5.chr5 3434938 96397 - 181907262 I a score=136012.000000 s hg38.chr5_KI270795v1_alt 111432 75 + 131892 AAAAAAAAATTATCTCCAATCGAGAGAAAACCACTATTACCATGTTTTGTGTTCCTTTCCAAAATATTTTATGAA s panPan2.chrUn_NW_014024182v1 19380 75 - 22698 AAAAAAAAATTATCTCCAATCGAGAGAAAACCACTATTACCATGTTTTGTGTTCCTTTCCAAAATATTTTATGAA i panPan2.chrUn_NW_014024182v1 C 0 C 0 s gorGor5.CYUI01000356v1 91423 75 + 152767 AAAAAAAAATTATCTCCAATGGAGAGAAAACCACTATTACCATGTTTTGTGTTCCTTTCCAAAATATTTTATGAA i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160338987 75 - 163208435 AAAAAAAAATTATCTCCAATCAAGAGAAAACCACTATTACCATGTTTTGTGTTCCTTTCCAAAATATTTTATGAA i nomLeu3.chr2 C 0 C 0 s macFas5.chr6 3804483 75 - 181584905 aaagaaaGTTTATCTCCAATCGGGAGAAAACCACTATTACCATGTTTTGTGTTCCTTTCCAAAATATTTTATGAA i macFas5.chr6 C 0 C 0 s cerAty1.NW_012001120v1 3550921 75 - 3647740 aaaaaaaGTTTACCTCCAATCGGGAGAAAACCACTATTACCATGTTTTGTGTTCCTTTCCAAAATATTTTATGAA i cerAty1.NW_012001120v1 C 0 I 2059 s chlSab2.chr23 79685180 75 + 82825804 aaaaaaaGTTTATCTCCAATCAGGAGAAAACCACTATTACCATGTTTTGTGTTCCTTTTCAAAATATTTCATGAA i chlSab2.chr23 I 1904 C 0 e macNem1.NW_012020287v1 3824503 2000 + 4899514 I e rheMac8.chr6 3615876 2019 - 180051392 I e colAng1.NW_012117422v1 126756 5186 - 815015 I e manLeu1.NW_012103876v1 1644261 7299 - 1768974 I e panTro5.chr5 3434938 96397 - 181907262 I a score=29265.000000 s hg38.chr5_KI270795v1_alt 111507 23 + 131892 TAAACAATTGTTC-AGTCAAattt s panPan2.chrUn_NW_014024182v1 19455 24 - 22698 TAAACAATTGTTCTAGTCAAATTT i panPan2.chrUn_NW_014024182v1 C 0 C 0 s gorGor5.CYUI01000356v1 91498 23 + 152767 TAAACAATTGTTC-AGTCAAATTT i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160339062 23 - 163208435 TAAACAATTGTTC-AGTCAAATTT i nomLeu3.chr2 C 0 C 0 s macFas5.chr6 3804558 23 - 181584905 TAAACAATTGTTC-AATCAAATTT i macFas5.chr6 C 0 C 0 s chlSab2.chr23 79685255 23 + 82825804 TAAACAATTGTTC-AGTCAAATTT i chlSab2.chr23 C 0 C 0 e cerAty1.NW_012001120v1 3550996 2059 - 3647740 I e macNem1.NW_012020287v1 3824503 2000 + 4899514 I e rheMac8.chr6 3615876 2019 - 180051392 I e colAng1.NW_012117422v1 126756 5186 - 815015 I e manLeu1.NW_012103876v1 1644261 7299 - 1768974 I e panTro5.chr5 3434938 96397 - 181907262 I a score=69226.000000 s hg38.chr5_KI270795v1_alt 111530 143 + 131892 atttttattttattttatatatatat-ttttattatactttaaattctaggatacatgtgcacaacgtgcaggtttg-ttacatatgtatacatgtgccatgttggtgtgctgcacccattaactcgtcatttacattaggcata s panPan2.chrUn_NW_014024182v1 19479 144 - 22698 ATTTTTATTTTATTTTATATATATATAttttattatactttaaattctagggtacatgtgcacaacgtgcaggtttg-ttacatatgtatacatgtgccatgttggtgtgctgcacccattaactcgtcatttacattaggcata i panPan2.chrUn_NW_014024182v1 C 0 I 2 s gorGor5.CYUI01000356v1 91521 133 + 152767 ATt----ttttattttatatatatat-------tatactttaaattctagggtacatgtgcacaacgtgcaggtttg-ttacatatgtatacatgtgccatgttggtgtgctgcacccattaactcgtcatttacattaggcata i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160339085 143 - 163208435 ATTTTTATTTT-TTATATATATATAt-ttttattatactttaaattccagggtacatgtgcacaacgtgcaggtttgtttacatatgtatacatgtgccatgttggtgtgctgcacccattaactcgtcatttacattaggcata i nomLeu3.chr2 C 0 I 2976 e cerAty1.NW_012001120v1 3550996 2059 - 3647740 I e macNem1.NW_012020287v1 3824503 2000 + 4899514 I e rheMac8.chr6 3615876 2019 - 180051392 I e macFas5.chr6 3804581 0 - 181584905 C e colAng1.NW_012117422v1 126756 5186 - 815015 I e manLeu1.NW_012103876v1 1644261 7299 - 1768974 I e chlSab2.chr23 79685278 0 + 82825804 C e panTro5.chr5 3434938 96397 - 181907262 I a score=173195.000000 s hg38.chr5_KI270795v1_alt 111673 323 + 131892 tcctaaggctatccctcccccctccccccaccccacaacaggccccggtgtgtgatgttccccttactgtgtccaagtgttctcattgttcaattcccacctatgagtgagaacatgcagtgtttggtgttttgtccttgtgatagtttgctgagaatgatggtttccagcttcatccatgtccctacaaaggacatgaactcatccttttttatggctgcatagtattccatggtgtatatatgccacattttcttaattcagtctatcattgttggacatttgggttggttccaagtctttgctattgtgggtagtgccgc s panPan2.chrUn_NW_014024182v1 19625 323 - 22698 tcctaaggctatccctcccccctccccccaccccacaacaggccccggtgtgtgatgttccccttcctgtgtccaagtgttctcattgttcaattcccacctatgagtgacaacatgcggtgtttcgttttttgtccttgcgatagtttgctgagaatgatggtttccagcttcatccatgtccctacaaaggacatgaactcatcattttttatggctgcatagtattccatggtgtatatgtgccacattttcttaattcagtctatcattgttggacatttgggttggttccaagtctttgctattgtgagtagtgccgc i panPan2.chrUn_NW_014024182v1 I 2 C 0 s gorGor5.CYUI01000356v1 91654 323 + 152767 tcctaaggctatccctcccccctccccccaccccacaacaggccccggtgtgtgatgttccccttcctgtgtccatgtgttctcattgttcaattcccacctatgagtgagaacatgtggtgtttggttttctgtccttgcgatagtttgctgagaatgatggtttccagcttcatccatgtccctacaaaggacatgaactcatcattttttatggctgcatagtattccatggtgtatatgtgccacattttcttaattcagtctatcattgttggacatttgggttggttccaagtctttgctattgtgagtagtgccgc i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160342204 323 - 163208435 tcctaaggctatccctcccccctccccacaccccacaacaggctccagtgtgtgatgttcctcttcctgtgtccatgtgttctcattgttcaattcccacctatgaatgagaacgtgcagtgtttggtttttcgtccttgcgatagtttgctgagaataatggtttccagcttcatccatgtccctacaaaggacatgaactcatccttttttatggctgcatagtattccatggtgtatatgtaccacattttcttaatccagtctatcattgttggacatttgggttggttccaagtctttgctattgtgagtagtgccac i nomLeu3.chr2 I 2976 C 0 e cerAty1.NW_012001120v1 3550996 2059 - 3647740 I e macNem1.NW_012020287v1 3824503 2000 + 4899514 I e rheMac8.chr6 3615876 2019 - 180051392 I e macFas5.chr6 3804581 0 - 181584905 C e colAng1.NW_012117422v1 126756 5186 - 815015 I e manLeu1.NW_012103876v1 1644261 7299 - 1768974 I e chlSab2.chr23 79685278 0 + 82825804 C e panTro5.chr5 3434938 96397 - 181907262 I a score=1719593.000000 s hg38.chr5_KI270795v1_alt 111996 560 + 131892 aatGTGAGACCTTATACCTGAAAATTCGAAGCATGTAACACATTACCTATAAAAGTgtctgatctcctcttttcctgtttgaatgccctttattcatttctcttgtctggttgttgtggccaggatttctg-----atgttgaaaaggagtggtgagagaggtgatccttatcttgtgctggttttcaa-ggggaatgcttccaccttttgtccattcagtacgatgttggctgtgggtttgtgacagatggctcttgttattt--------------------------atttatttattttttgagatggagttccactcttcttgcccaagctagagtgcaatggcacgatcttggcttactgcaacctccgcctaatgggtgcaagtgattctcctgcctcagcctacctagtagctgtgattacaggcacgcgccaccaatcctggctaa---ttttttttgta-tttttagtagaaatggggttttaccatgttcgccaggctggtctcgaactcctgacctcaggtgatctgcccgcttcggcctcccagagtgctgggattacaggcatgagccaccgtgcccagccc s panPan2.chrUn_NW_014024182v1 19948 584 - 22698 aatGTGAGACCTTATACCTGAAAATTCGAAGCATGTAACACATTACCTATAAAAGTgtctgatctcctcttttcctatttgaatgccctttattcatttctcttgtctggttgctgtggccaggatttctg-----atgttgaaaaggagtggtgagagaggtgatccttatcttgtgctggttttcaa-ggggaatgcttccaccttttgtccattcagtatgatgttggctgtgggtttgtgacagatggctcttgttatttatttatttatttatt-tattttat-aatttatttattttttgagatggagttccactcttcttgcccaagctagagtgcaatggcacgatcttggcttactgcaacctccgcctaatgggtgcaagtgattctcctgcctcagcctacctagtagctgtgattacaggcacgcgccaccactcctggctaa---ttttttttgta-tttttagtagaaatggggttttaccatgttcgctaggctggtcccgaactcctgacctcaggtgatctgcccgcttcggcctcccaaagtgctgggattacaggcataagccactgtgcccagccc i panPan2.chrUn_NW_014024182v1 C 0 C 0 s gorGor5.CYUI01000356v1 91977 578 + 152767 aatGTGAGACCTTATACCTGAAACTTCGAAGCATGTAACACATTACCTATAAAAGTgtctgatctcctcttttcctatttgaatgccctttattcatttctcttgtctggttgctgtggccaggatttctg-----atgttgaaaaggagtggtgagagaggtgatccttatcttgtgctggttttcaagggggaatgcttccaccttttgtccattcagtacaatgttggctgtgggtttgtgacagatggctcttgttatat------ttatttatt-tattttat-tatttattt-ttttttgagatggagttctactcttcttgcccaagctagagtgcaatggcacaatcttggcttactgcaacctccgcctaatgggtgcaagtgattctcctgcctcagcctacctagtagctgtgattacaggcacgcgccaccactcctggctaa---ttttttttgta-tttttagtagaaatggggttttaccatgttcgccaggctggtctcgaactcctgacctcaggtgatctgcccgctttggcctcccaaggtgctgggattacaggcatgagccaccgtgcccagccc i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160342527 586 - 163208435 aatGTGAGATCTTATACCTGAAAATTCGAAGCATGTAACACATTACCCATAAAAGTgtctgatctcctcttttcctatttgaatgcccttaattcatttctcttacctggtttctgtggccagggtttcta-----atgttgaaaaggagtggtgagagaggtgatccttatcttgtgctggttttcag-ggggaatgcttccaccttttgcccattcagtacgatgttggctgtgggtttgtgacagatggctcttgttatttatttatttatttattctattttat-tatttattttttttttgagatggagtttcactcttcttgcccaagctagagtgcaatggcacgatcttggcttactgcaacctccgcctaatgggtgcaagtgattctcctgcctcagcctacctagtagctgtgattacaggcacgtgccaccactcctggctaa---ttttttttgtattttttagtagaaatggggttttaccatgtttgccaggctggtctcggactcctgacctcaggtgatctgcccgcttcggcctcccaaagtgctgggattacaggcatgagccactgtgcccagccc i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3617895 577 - 180051392 AATGTGAGATCTTATACCTGAGAATTCGAAGCACGTAACACATTACCTATAAAAGTgtctgatctcctcttttcctatttgaatgcccttcatttatttctcttgtctggctgctgtggccaggatttctaatattatgttgaaaaggagtggtgagaaaggtgatccttatcttgtgctggtcttcaa-ggggaatgcttccaccttttgcccattcactatgatgttggctgtgggtttgtgacagatggctcttgttatttat-------tttatt----------tatttatttaattattgagatgaagtttcgctcttcttgcccaagctggagtgcaatggcacaagctcagctcactgcaacctccgcctcctgggtgcaagtgattctcctgcctcagcctaccaagtagctgtgattacaggcgtgcgccaccactcctggctaatttttttttttgta-cttttagtagaaatggggtttcaccatgttcaccaggctggtcttgaactcctgacctcaggtgatctgtctgcttcagcctcccaaagtgctgggattccaggcatgagccaccatgcccagccc i rheMac8.chr6 I 2019 C 0 s macFas5.chr6 3804581 577 - 181584905 AATGTGAGATCTTATACCTGAGAATTCGAAGCACGTAACACATTACCTATAAAAGTgtctgatctcctcttttcctatttgaatgcccttcatttatttctcttgtctggctgctgtggccaggatttctaatattatgttgaaaaggagtggtgagaaaggtgatccttatcttgtgctggtcttcaa-ggggaatgcttccaccttttgcccattcagtatgatgttggctgtgggtttgtgacagatggctcttgttatttat-------tttatt----------tatttatttaattattgagatgaagttttgctcttcttgaccaagctggagtgcaatggcacaagctcagctcacggcaacctccgcctcctgggtgcaagtgattctcctgcctcagcctaccaagtagctgtgattacaggcatgtgccaccactcctggctaatttttttttttgta-cttttagtagaaatggggtttcaccatgttcaccaggctggtcttgaactcctgacctcaggtgatctgtctgcttcagcctcccaaagtgctgggattccaggcatgagccaccatgcccagccc i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3826503 577 + 4899514 AATGTGAGATCTTATACCTGAGAATTCGAAGCACGTAACACATTACCTATAAAAGTgtctgatctcctcttttcctatttgaatgcccttcatttatttctcttgtctggctgctgtggccaggatttctaatattatgttgaaaaggagtggtgagaaaggtgatccttatcttgtgctggtcttcaa-ggggaatgcttccaccttttgcccattcagtatgatgttggctgtgggtttgtgacagatggctcttgttatttat-------tttatt----------tatttatttaattattgagatgaagtttcgctcttcttgcccaagctggagtgcaatggcacaagctcagctcactgcaacctccgcctcctgggtgcaagtgattctcctgcctcagcctaccaagtagctgtgattacaggcgtgcgccaccactcctggctaatttttttttttgta-cttttagtagaaatggggtttcaccatgttcaccaggctggtcttgaactcctgacctcaggtgatctgtctgcttcagcctcccaaagtgctgggattccaggcatgagccaccatgcccagccc i macNem1.NW_012020287v1 I 2000 C 0 s chlSab2.chr23 79685278 584 + 82825804 AATGTGAGACCTTATACCTGAGAATTCGAAGCATGTAACACATTACCTATAAAAGTGtctgatctcctcttttcttatttgaatgcccttcatttatttctcttgtctggctgctgtggccaggatttctaatattatgttgaaaaggagtggtgagagaggtgatccttatcttgtgctggtcttcaa-ggggaatgcttccaccttttgcccattcagtacgatgttggctgtgggtttgtgacagatggctcttgttatttat-------tttatt-taattaatgtatttatttaattattgagagggagttttgctcttcttgcccaagctggagtgcaatggcacaatctcagctcactgcaacctccgcctcctgggtgcaagtgattctcctgcctcagcctaccaagtagctgtgattacaggcgtgcaccaccactcctggctaa--tttttttttgta-gttttagtagaaatggggtttcaccatgtttgccaggctggtcttgaactcctgacctcaggtgatctgcccacttcagcctcccaaagtgctgggattccaggcatgagccaccatgcccagccc i chlSab2.chr23 C 0 C 0 s colAng1.NW_012117422v1 131942 571 - 815015 AATGTGAGACCTTATATGTGAGAATTCGAAGCATGTAACACATTACCTATAAAAGagtctgatctcctcttttcctatttgaatgcccttcatttatttctcttgtctggctgctgtggccaggatttctaatattatgttgaaaaggagtggtgagagaggtgatccttatcttgtgctagtcttcaa-ggggaatgcttccaccttttgcccattcagtacgatgttggctgtgggtttgtgacagatggctcttGttatttat-------tttatt----------tatttatttaattattgagatggagtttcgc---tcttgcccaagctggagtgcaatggcacaatctcagctcactgcaacctccgcctcctgggtgcaagtgattctcctgcctcagcctaccaagtagctgtgattacaggcgtgcgccaccactcctggctaa---ttttttttgta-gttttagtagaaatggggtttcaccatgtttgccaggctggtcttgaactcctgacctcaggtgatctgcctgcttcagcctcccatagtgctgggattccaggcatgagccaccatgcccagccC i colAng1.NW_012117422v1 I 5186 I 1562 e cerAty1.NW_012001120v1 3550996 2059 - 3647740 I e manLeu1.NW_012103876v1 1644261 7299 - 1768974 I e panTro5.chr5 3434938 96397 - 181907262 I a score=3449311.000000 s hg38.chr5_KI270795v1_alt 112556 1404 + 131892 atggctcttgttattttgaggtatgttcctgcaatacctagtttattgagtttttaatatgaagggatgttgaattttatcaaaagccttttctgcatctattgatatgatcatgtggtttttgtctttagttctgtttatgcaatgaatcacatttattgatttgcatatgttgaaccagccttgcatcctgaggatgaagcctacttcatcatggtggacaagctttttgatatgctgctggatttggtgtgctaatattttgttgaggatttttacatcaatgttaaccaaggatattggcctgaagttttcttttttgttgtgtctctgcgaggttttggtattaggatgcagacaacatgattctacgtctggaaaaccccatattcttggccccaaagcttcttaagctgataaacaacttcagcaaagtttcaggatacaaaatcaacatac-------aaaaaaaatcactagcattcttatacaccagcaacagccaaaccaggaaccaaatcaaaactcaattccattcacaatcac--cacacacacacac-------------------------------------------------------------------tcctagaaatacagctaaccaggaaagtgaaagatctctacaaggagaattatacaacactgctcaaagaaattagagatgatacaaacaaatgggaaaacatttcatactcatagatagaaaaattgcccaaagcaatttatagattcaatgctattcctatcaaaccactaatgatattcttcacagaaatataaaaaactatttcaaagtttatatagaacc-aaaaaggatcccaaatggccaagacaattctaagcaaaaagaacaaagttggaaacatcacactacccaacttcaaactacactacagggctatagtaaccaaaacagcatggtactggtat------aaaaaaagacacataggccaatgaaacagaatagaggatctagaaataaggccacatacctatgatcatctgatcttcaacaaagctgacaaaaacaagcaatggagaaaggacttcctattcaataaatggtgctgagataacgggctagccatatgtagaagattgaaactggatctctttcttacaccatatacaaaatcaactcagggtggattaaagaattaaatgaaaacccaaaactataaaaactctggaaggcaacctaggtaataccattttgaacataggaactggcaaagatatcgtgatgaagacgccaaaaacaattgcaacaaaagcaaaaattgacaaatgggatctaattaaaccaaaaagcttgtgcatggcaaaagaaactatcaacaagagtaaacagcctacagaagaggagaaaatatttgcaaactatacacgtgacaaaggtctactatccagcatctataagaaacttaaggctgggtg s panPan2.chrUn_NW_014024182v1 20532 1403 - 22698 atggctcttgttattttgaggtatgttcctgcaatacctagtttattgagtttttaatatgaagggatgttaaattttatcaaaagccttttctgcatctattgatatgatcatgtggtttttgtcttcagttctgtttatgtgatgaatcacatttattgatttgcatatgttgaaccagccttgcatcctgaggatgaagcctacttgatcatggtggacaagctttttgatatgctgcgggatttggtgtgctaatattttgttgaggatttttacatcaatgttaaccaaggatattggcctgaagttttcttttttgttgtgtctctgcgaggttttggtattaggttgcagacaacatgattctatgtctggaaaaccccatattctcggccccaaagcttcttaagctgataaacaacttcagcaaagtttcaggatacaaaatcaatatac-------aaaaaaaatcactagcattcttatacaccagcaacagccaagccaggaaccaaatcaaaactcaattccattcacaatcac--cacacacacagac-------------------------------------------------------------------tcctagaaatacagctaaccaggaaggtgaaagatctctacaaggagaattatacaacactgctcaaagaaattagagatgatacaaacaaatgggaaaacatttcatactcatagatagaaaaattgcccaaagcaatttatagattcaatgctattcctatcaaaccactaatgatattcttcacagaaatataaaaaactatttcaaagtttatatagaacc-aaaaaggatcccaaatggccaagacaattctaagcaaaaagaacaaagttggaaac--cacactacccaacttcaaactacactacagggctatagtaaccaaaacagcatggtactggtat-----aaaaaaaagacacataggccaatgaaacagaatagagaatctagaaataaggccacatacctatgatcatctgatcttcaacaaagctgacaaaaacaagcaatggagaaaggacttcctattcaataaatagtgctgagataacgggctagccatatgtagaagattgaaactggatctttttcttacaccatatacaaaatcaactcaggatggattaaagaattaaatgaaaacccaaaactataaaaactctggaagacaacctaggtaataccattttgaacataggaactggcaaagatatcgtgatgaagacgccaaaaacaattgcaacaaaagcaaaacttgacaaatgggatctaattaaaccaaaaagcttgtgcatggcaaaagaaactatcaacaagagtaaacagcctacagaataggagaaaatatttgcaaactatacacgtgacaaaggtctactatccagcatctataagaaacttaaggctgggcg i panPan2.chrUn_NW_014024182v1 C 0 C 0 s gorGor5.CYUI01000356v1 92555 1404 + 152767 atggctcttgttattttgaagtatgttcctgcaatacctagtttattgagtttttaatatgaagggatgttgaattttatcaaaagccttttctgcatctattgatatgatcatgtggtttttgtctttagttctgtttatgcgatgaatcacatttattgatttgcatatgttgaaccagccttgcatcctgaggatgaagcctacttcatcatggtggacaagctttttgatatgctgctggatttggtgtgctaatattttgttgaggatttttacatcaatgttaaccaaggatattggcctgaagctttcttttttgttgtgtctctgcgaggttttggtattaggatgcagacaacatgatttgacatctggaaaactccatattctcggccccaaagcttcttaagctgataaacaacttcagcaaagtttcaggatacaaaatcaacatac-------aaaaaaaatcactagcattcttatacaccagcaacagccaaaccaggaaccaaatcaaaactcaattccattcacaatcaccacacacacacacac-------------------------------------------------------------------tcctagaaatacagctaaccaggaaggtgaaagatctctacaaggagaattatacaacactgctcaaagaaattagagatgatacaaacaaatgggaaaacatttcatactcatagatagaaaaaatgcccaaagcaatttatagattcaatgctcttcctatcaaaccactaatgatattcttcacagaaatataaaaaactatttcaaagtttatatagaacc-aaaaaggatcccaaatggccaagacaattctaagcaaaaagaacaaagttggaaacatcacactacccaacttcaaactacactacagggctatagtaaccaaaacagcatggtactggtat------aaaaaaagacacataggccaatgaaacagaatagaggatctagaaataaggccacatacctatgatcatctgatcttcaacaaagctgacaaaaacaagcaatggagaaaggacttcctattcaataaatggtgctgagataacgggctagccatatgtagaagattgaaactggatctctttcttacaccatatacaaaatcaactcaggatggattaaagaattaaatgaaaacccaaaactat--aaactctggaagacaacctaggtaataccattttgaacataggaactggcaaagatatcgtgatgaagacgccaaaaacaattgcaacagaagcaaaaattgacaaatgggatctaattaaaccaaaaagcttgtgcatggcaaaagaaactatcaacaagagtaaacagcctacagaataggagaaaatatttgcaaactatacacgtgacaaaggtctactatccagcatctataagaaacttaaggctgggtg i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160343113 1407 - 163208435 atggctcttgttattttgaggtatgttcctgcaatatctag-ttattgaatttttaatatgaa-ggatgttgaattttatcaaaagccttttctgcatctattgatatgatcatgtggtttttgtctttagttctgtttatgcaatgaatcacatttattgatttgcatatgttgaaccagccttgcatcctgaggatgaagcctacttgatcatggtggacaagctttttgatacgctgctggatttggtgtgctagtattttgttgaggatttttgcatcgatgttaatcaaggatattggcctgaagttttcttttttgttgtgtctctgcggggttttggtattaggatgcagacaacatgattctatgtctggaaaaccccatattctcggccccaaagcttcttaagctgataaacaacttcagcaaagtttcaggatacaaaatcaacatac-------aaaaaaaatcactagcattcttatacaccagcaacagccaaaccaggaaccaaatcaaaactcaattccattcacaatcac--cacacacacaca---------------------------------------------------------------------cctagaaatacagctaacaaggaaggtgaaagatctccacaatgagaattatacaacactgctcaaagaaattagagatgatacaaacaaatgggaaaacatttcatactcacagatagaaaaattgcccaaagcaatttatagattcaatgctattcctatcaaaccactaatgatattcttcacagaaatataaaaaactatttcaaaatttatatagaactaaaaaaggatcccaaatggccaggacaattctaagcaaaaagaacaaaattggaaacatcacactacccaacttcaaactacactacagggctatagtaaccaaaacagcatggtactggtattaaaaaaaaaaaagacacataggccaatgaaacagaatagagaatctagaaataaggccacatacctatgatcatctgatcttcaacaaagctgacaaaaacaagcaatggagaaaggacttcctattcaataaatggtgctgagataactggctagccatatgcagaagattgaaactggatctcttccttacaccatatacaaaatcaactcaggatggattaaagaattaaatggaaacccaaaactgtaaaaactctggaagacaacctaggtaataccattttgaacataggaactggcaaagatattgtgatgaagacaccaaaaacaattgcaacaaaagcaaaaattgacaaatgggatctaattaaaccaaaaagcttctgcatggcaaaagaaactatcaacaagagtaaacagcctacagaataggagaaaatatttgcaaactatacacatgacaaaggtctaccatccagcatctataagaaacttaaggctgggca i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3618472 1472 - 180051392 atggctcttgttattttgagggatgttcctgcaatacctagtttattgagtttttaacatgaagggatgttgaattttattgaaagctttttctgcatctattgatatgatcatgtggtttttgtctttagttctgtttatgtgatgaatcacatttattgatttgcatatgttgaaccaaccttgcatcctgaggatgaagcctacttgatcgtggtggataagctttttgatatgctgctggatttggtgcgctagtattttgttgaggatttttgcatcaatgttaattaaggattttggcctgaagttttcttttttgttgtgtctctgtgaggttttggtattaggatgcagacaacatgattctatgtctggaaaaccccatattctcggccccaaagctccttaagctgataaacaacttcagcaaagtttcaggatacaaaatcaacatac-aaaaaaaaaaaaaatcactagcattcttatacaccagcaacagccaaaccaggaaccaaatcaaaactcaattccattcacaatcac--cacacacacacacacacacacaca----cacacacaagaaatacagctctagtattacaaatacacactagaaataccctccctagaaatacagctaaccaggaaggtgaaagatctctaca---agaattatataacactgctcagagaaattagagatgatacaaacaaatgggaaaacatttcatgctcatagatagaaaaattgcccaaagcaatttatggattcaatgctattcctatcaaaccactaatgacattcttcacagaaatat-aaaaactatttcaaagtttatatagaaccaaaaaagaatcccaaatggccaagacaattctaagcaaaaagaacaaagttggaaacatcacactacccaacttcaaactacactacaggactatagtaaccaaaacagcatggtactggtat----aaaaaaaaagacacataggccaatgaaacggaatagagaatctagaaataaggccacatacctatgatcatctgatcttcaacaaagctgacaaaaacaagcaatggagaaaggacttcctattcaataaatggtgctgggataactggctagccatatgcagaagattgaaactggatctcttccttacactatatacaaaatcaactcaggatgaattaaagacttaaatgaaaacccaaaactataaaaaccctggaagacaacctaggtaataccattttgaacgtaagaactggcaaagatattatgacaaagacgccaaaaacaattgcaacaaaagcaaaaattgacaaatgggatctaattaaaccaaaaagcttctgcatggcaaaagaaactatcaacaagagtaaacagcctacagaataggagaaaatatttgcaaactatacacgtgacaaaggtctactatcctgcatctataagaaacttaaggccgggtg i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3805158 1477 - 181584905 atggctcttgttattttgagggatgttcctgcaatacctagtttattgagtttttaacatgaagggatgttgaattttattgaaagctttttctgcatctattgatatgatcatgtggtttttgtctttagttctgtttatgtgatgaatcacatttattgatttgcatatgttgaaccaaccttgcatcctgaggatgaagcctacttgatcgtggtggataagctttttgatatgctgctggatttggtgcgctagtattttgttgaggatttttgcatcaatgttaattaaggattttggcctgaagttttcttttttgttgtgtctctgtgaggttttggtattaggatgcagacaacatgattctatgtctggaaaaccccatattctcggccccaaagctccttaagctgataaacaacttcagcaaagtttcaggatacaaaatcaacatac-aaaaaaaaaaaaaatcactagcattcttatacaccagcaacagccaaaccaggaaccaaatcaaaactcaattccattcacaatcac--cacacacacacacacacacacacacacgcacacacaagaaatacagctctagtattacaaatacacactagaaataccctccctagaaatacagctaaccaggaaggtgaaagatctctaca---agaattatataacactgctcagagaaattagagatgatacaaacaaatgggaaaacatttcatgctcatagatagaaaaattgcccaaagcaatttatggattcaatgctattcctatcaaaccactaatgatattcttcacagaaatat-aaaaactatttcaaagtttatatagaaccaaaaaagaatcccaaatggccaagacaattctaagcaaaaagaacaaagttggaaacatcacactacccaacttcaaactacactacaggactatagtaaccaaaacagcatggtactggtat---aaaaaaaaaagacacataggccaatgaaacggaatagagaatctagaaataaggccacatacctatgatcatctgatcttcaacaaagctgacaaaaacaagcaatggagaaaggacttcctattcaataaatggtgctgggataactggctagccatatgcagaagattgaaactggatctcttccttacactatatacaaaatcaactcaggatgaattaaagacttaaatgaaaacccaaaactataaaaaccctggaagacaacctaggtaataccattttgaacgtaagaactggcaaagatattatgacaaagacgccaaaaacaattgcaacaaaagcaaaaattgacaaatgggatctaattaaaccaaaaagcttctgcatggcaaaagaaactatcaacaagagtaaacagcctacagaataggagaaaatatttgcaaactatacacgtgacaaaggtctactatcccacatctataagaaacttaaGgccgggtg i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3827080 1465 + 4899514 atggctcttgttattttgagggatgttcctgcaatacctagtttattgagtttttaacatgaagggatgttgaattttattgaaagctttttctgcatctattgatatgatcatgtggtttttgtctttagttctgtttatgtgatgaatcacatttattgatttgcatatgttgaaccaaccttgcatcctgaggataaagcctacttgatcatggtggataagctttttgatatgctgctggatttggtgcgctagtattttgttgaggatttttgcatcaatgttaattaaggattttggcctgaagttttcttttttgttgtgtctctgtgaggttttggtattaggatgcagacaacatgattctatgtctggaaaaccccatattctcggccccaaagctccttaagctgataaacaacttcagcaaagtttcaggatacaaaatcaacatac---aaaaaaaaaaaatcactagcattcttatacaccagcaacagccaaaccaggaaccaaatcaaaactcaattccattcacaatcac--cacacacacacacacaca----------cacacacaagaaatacagctctagtattacaaatacacactagaaataccctccctagaaatacagctaaccaggaaggtgaaagatctctaca---agaattatataacactgctcagagaaattagagatgatacaaacaaatgggaaaacatttcatgctcatagatagaaaaattgcccaaagcaatttatggattcaatgctattcctatcaaaccactaatgatattcttcacagaaatat-aaaaactatttcaaagtttatatagaaccaaaaaagaatcccaaatggccaagacaattctaagcaaaaagaacaaagttggaaacatcacactacccaacttcaaactacactacaggactatagtaaccaaaacagcatggtactggtat---aaaaaaaaaagacacataggccaatgaaacggaatagagaatctagaaataaggccacatacctatgatcatctgatcttcaacaaagctgacaaaaacaagcaatggagaaaggacttcctattcaataaatggtgctgggataactggctagccatatgcagaagattgaaactggatctcttccttacactatatacaaaatcaactcaggatgaattaaagacttaaatgaaaacccaaaactataaaaaccctggaagacaacctaggtaataccattttgaacgtaagaactggcaaagatattatgacaaagacgccaaaaacaattgcaacaaaaacaaaaattgacaaatgggatctaattaaaccaaaaagcttctgcatggcaaaagaaactatcaacaagagtaaacagcctacagaataggagaaaatatttgcaaactatacacgtgacaaaggtctactatcccgcatctataagaaacttaaggccgggtg i macNem1.NW_012020287v1 C 0 C 0 s chlSab2.chr23 79685862 1427 + 82825804 atggctcttgttattttgagggatgttcctgcaatacctagtttattgagtttttaacatgaagggatgttgaattttattgcaagccttttctgcatctattgatatgatcatgtagtttttgtctttagttctgtttatgtgatgaatcacatttattgatttgcatatgttgaaccaaccttgcatcctgaggatgaagcctacttgatcatggtggataagctttttgatatgctgctggatttggtgcactagtattttgttgaggatttttgcatcaatgttaatcaaggatattggcctgaagttttcttttttgttgtatctctgcgaggttttggtattaggatgcagacaacatgattctatgtctggaaaaccccatattctcggccccaaagctccttaagctgataaacaacttcagcaaagtttcaggatacaaaatcaacatacaaaaaaaaaaaaaaatcactagcattcttatacaccagcaacagccaaaccaggaaccaaatcaaaactcaattccattcacaatcac--cacacacacacacacaca----------cacacaca-----------------------------------------catatctagaaatacaactaaccaggaaggtgaaagatctctaca---agaattatataacactgctcagagaaattagagatgatacaaacaaatgggaaaacatttcatgctcatagatagaaaaattgcccaaagcaatttatggattcaatgctattcctatcaaaccactaatgatattcttcacagaaatac-aaaaactatttcaaagtttatatagaaccaaaaaagaatcccaaatggccaagacaattctaagcaaaaagaataaagttggaaacatcacactacccaacttcaaactacactacaggactatagtaaccaaaacagcatggtactggtat---agaaaaaaaagacacataggccaatgaaacagaatagagaatctagaaataaggccacatatctatgatcatctgatcttcaacaaagctgacaaaaacaagcaatggagaaaggacttcctattcaataaatggtactgggataactggctagccatatgcagaagattgaaactggatctcttccttacaccatatacaaaatcaactcaggatggattaaagacttaaatgaaaacccaaaactataaaaaccctggaagacaacctaggtaataccattttgaacataagaactggcaaagatatcatgacgaagacgccgaaaacaattgcaacaaaagcaaaaattgacaaatggaatctaattaaaccaaaaagcttctgcatggcaaaagaaactatcaacaagagtaaacagcctacagaataggagaaaatatttgcaaaccatacacgtgacaaaggtctactatccagcatctataagaaacttaaggccgggtg i chlSab2.chr23 C 0 I 1 e cerAty1.NW_012001120v1 3550996 2059 - 3647740 I e colAng1.NW_012117422v1 132513 1562 - 815015 I e manLeu1.NW_012103876v1 1644261 7299 - 1768974 I e panTro5.chr5 3434938 96397 - 181907262 I a score=11286.000000 s hg38.chr5_KI270795v1_alt 113960 7 + 131892 cagtggc s panPan2.chrUn_NW_014024182v1 21935 7 - 22698 cagtggc i panPan2.chrUn_NW_014024182v1 C 0 C 0 s gorGor5.CYUI01000356v1 93959 7 + 152767 cagtggc i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160344520 7 - 163208435 cagtggc i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3619944 7 - 180051392 tggtggc i rheMac8.chr6 C 0 I 898 s macFas5.chr6 3806635 7 - 181584905 tggtggc i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3828545 7 + 4899514 tggtggc i macNem1.NW_012020287v1 C 0 I 181 e cerAty1.NW_012001120v1 3550996 2059 - 3647740 I e colAng1.NW_012117422v1 132513 1562 - 815015 I e manLeu1.NW_012103876v1 1644261 7299 - 1768974 I e chlSab2.chr23 79687289 1 + 82825804 I e panTro5.chr5 3434938 96397 - 181907262 I a score=34810.000000 s hg38.chr5_KI270795v1_alt 113967 45 + 131892 tcacacttgtaatcccagtactttgggaggccgaggcaggtggat s panPan2.chrUn_NW_014024182v1 21942 45 - 22698 tcacacttgtaatcccagtactttgggaggccgaggcaggtggat i panPan2.chrUn_NW_014024182v1 C 0 C 0 s gorGor5.CYUI01000356v1 93966 45 + 152767 tcacacttgtaatcccagtactttgggaggccgaggcaggtggat i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160344527 45 - 163208435 tcacacttgtaatcccagtactttgggaggccgaggcaggtggat i nomLeu3.chr2 C 0 C 0 s macFas5.chr6 3806642 45 - 181584905 aggcgcctgtagtcccagctacttgggaggctgaggcaggagaat i macFas5.chr6 C 0 I 3308 e cerAty1.NW_012001120v1 3550996 2059 - 3647740 I e macNem1.NW_012020287v1 3828552 181 + 4899514 I e rheMac8.chr6 3619951 898 - 180051392 I e colAng1.NW_012117422v1 132513 1562 - 815015 I e manLeu1.NW_012103876v1 1644261 7299 - 1768974 I e chlSab2.chr23 79687289 1 + 82825804 I e panTro5.chr5 3434938 96397 - 181907262 I a score=41179.000000 s hg38.chr5_KI270795v1_alt 114012 93 + 131892 cacgaggtcaggtgatggagaccatcctggctaacatggtgaaaccccgtctctactgaaaaaaacaaaaacaaaaacaaaaaaaaattagct s panPan2.chrUn_NW_014024182v1 21987 83 - 22698 cacgaggtcaggtgatggagaccatcctggctaacatggtgaaaccccgtctctactg---aaaataaaaac-------aaaaaaaattagct i panPan2.chrUn_NW_014024182v1 C 0 C 0 s gorGor5.CYUI01000356v1 94011 84 + 152767 cacgaggtcaggtgatggagaccatcctggctaacatggtgaaaccccgtctctactgaaaaaaaaaaaa---------aaaaaaaattagct i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160344572 86 - 163208435 cacgaggtcaggtgatggagaccatcctggctaacatggtgaaaccccatctctactgaaaaaaaaaaatac-------aaaaaaaattagct i nomLeu3.chr2 C 0 C 0 e cerAty1.NW_012001120v1 3550996 2059 - 3647740 I e macNem1.NW_012020287v1 3828552 181 + 4899514 I e rheMac8.chr6 3619951 898 - 180051392 I e macFas5.chr6 3806687 3308 - 181584905 I e colAng1.NW_012117422v1 132513 1562 - 815015 I e manLeu1.NW_012103876v1 1644261 7299 - 1768974 I e chlSab2.chr23 79687289 1 + 82825804 I e panTro5.chr5 3434938 96397 - 181907262 I a score=4205.000000 s hg38.chr5_KI270795v1_alt 114105 5 + 131892 gggca s panPan2.chrUn_NW_014024182v1 22070 5 - 22698 gggcg i panPan2.chrUn_NW_014024182v1 C 0 C 0 s gorGor5.CYUI01000356v1 94095 5 + 152767 gggca i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160344658 5 - 163208435 gggcg i nomLeu3.chr2 C 0 C 0 s colAng1.NW_012117422v1 134075 5 - 815015 gggcg i colAng1.NW_012117422v1 I 1562 C 0 e cerAty1.NW_012001120v1 3550996 2059 - 3647740 I e macNem1.NW_012020287v1 3828552 181 + 4899514 I e rheMac8.chr6 3619951 898 - 180051392 I e macFas5.chr6 3806687 3308 - 181584905 I e manLeu1.NW_012103876v1 1644261 7299 - 1768974 I e chlSab2.chr23 79687289 1 + 82825804 I e panTro5.chr5 3434938 96397 - 181907262 I a score=1911.000000 s hg38.chr5_KI270795v1_alt 114110 1 + 131892 t s panPan2.chrUn_NW_014024182v1 22075 1 - 22698 t i panPan2.chrUn_NW_014024182v1 C 0 C 0 s gorGor5.CYUI01000356v1 94100 1 + 152767 t i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160344663 1 - 163208435 t i nomLeu3.chr2 C 0 C 0 s macNem1.NW_012020287v1 3828733 1 + 4899514 t i macNem1.NW_012020287v1 I 181 C 0 s cerAty1.NW_012001120v1 3553055 1 - 3647740 t i cerAty1.NW_012001120v1 I 2059 C 0 s colAng1.NW_012117422v1 134080 1 - 815015 t i colAng1.NW_012117422v1 C 0 C 0 e rheMac8.chr6 3619951 898 - 180051392 I e macFas5.chr6 3806687 3308 - 181584905 I e manLeu1.NW_012103876v1 1644261 7299 - 1768974 I e chlSab2.chr23 79687289 1 + 82825804 I e panTro5.chr5 3434938 96397 - 181907262 I a score=861066.000000 s hg38.chr5_KI270795v1_alt 114111 394 + 131892 ggtggcgggcgcctgtagtcccaactacttggggggctgaggcaggagaatggcatgaacccggcaggcagagcttgcagtgagctgagatcgcaccactgcactccagcctgggcgactgagaaagactccatctcaa--------aaaaaga---------------aaaaaacttaagcaaatttccaagaaaaaaaccaagcaactttattttatt---ttttatttattttttatttttgagacagagtatcgctctgttgc----ccaggctgaagtgctatggcacacaatctcggctcactgcaacctctgcctcctggggtcaagcaattctcctgtctcagcctcctgagtagctgggattacaggcacccacctgtaatccaccaccacaccaggccatta-attttttgtatt- s panPan2.chrUn_NW_014024182v1 22076 390 - 22698 ggtggcgggcgcctgtagtcccaactactcggggggctgaggcaggagaatggcgtgaacccggcaggcggagcttgcagtgagctgagatcgcaccactgcactccagcctgggcgactgagcaagactccatctcaa--------aaaaaaa--------------gaaaaaacttaagcaaatttccaag-aaaaaaccaagcaactttatt---ta---ttttattt-tattttatttttgagacagagtatcgctctgttgc----ccaggctggagtgctatggcacacaatctcggctcactgcaacctctgcctcctggggtcaagcaattctcctgtctcagcctcctgagtagctgggattacaggcatccacctgtaatccaccaccacaccaggccatta-attttttgtatt- i panPan2.chrUn_NW_014024182v1 C 0 C 0 s gorGor5.CYUI01000356v1 94101 400 + 152767 ggtggcaggcgcctgtagtcccaactacttggggggctgaggcaggagaatggtgtgaacccggcaggcagagcttgcagtgagctgagatcacaccactgcactccagcctgggcgactgagaaagactccatctcaa--------aaaaaaa--------aaaaagaaaaaaacttaagcaaatttccaagaaaaaaaccaagcaactttattttat----ttttatttattttttatttttgagacagagtatcgctctgttgc----ccaggctgaagtgctatggcatgcaatctcggctcactgcaacctctgcctcctggggtcaagcaattctcctgtctcagcctcctgagtagctgggattacaggcacccacctgtaatccaccaccacaccaggccatta-attttttgtatt- i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160344664 400 - 163208435 ggtggcaggcgcctgtagtcccaactacttggggggctgaggcaggagaatggcgtgaacccgggaggcggagcttgcagtgagctgagatcgcaccactgcactccagcctgggcgactgagcaagactccatttcaa--------aaaaaaa---------aaaagaagaaaa---aagcaaatttccaagaaaaaaaacaagcaacTTTAttttattttgtttgattttttttttttttttgagacggagtctcactctgttgc----ccaggctggagtgctatggcacacaatctcagctcactgcaacctctgcctcctggggtcaagcaattctcctgtcttggcctcctgagtagctgggattacaggcacccacttgtaatccaccaccacaccaggccatta-attttttgtatt- i nomLeu3.chr2 C 0 C 0 s macNem1.NW_012020287v1 3828734 417 + 4899514 ggtggcaggcgcctgtagtcccagctacttgggaggctgaggcaggagaatggcgtgaacccggaaggcaaagcttgtagtgagccaagattgtgcaactgcactccagcctgagagaccgagcgagactccatctaaaaagtaaataaataaataaataaataaaaTAaagaaacttaagcaaatttccaagaaaaaaaccaagcaactttattttg-----ttttgtttgattttgttttttgagatggagtctcgctctgttgc----ccaggctggagtgctatggcacacaatctcggctcactgcaacctctgcctcctggggtcaagcaattctcctgtctcagcctcctgagtagctgggattacaggcagccacctgtaatgcaccaccaagccaggccattattttttttgtattt i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012001120v1 3553056 416 - 3647740 ggtggcaggcgcctgtagtcccagctacttgggaggctgaggcaggagaatggcgtgaacctgggaggcaaagcttgtagtgagccaagattgtgcaactgcactccagcctgagagaccgagtgagactccatctaaaaagtaaataaataaataaataaataaaataaagaaacttaagcaaatttccaagaaaaaaaacaagcaactttattttg-----ttttgtttgattttgttttttgagatggagtctcgctctgttgc----ccaggctggagtgctatggcacacaatctcggctcactgcaacctctgcctcctggggtcaagcaattctcctgtctcagcctcctgagtagctgggattacaggcagccacctgtaatgcaccaccaagccaggccatta-tttttttgtattt i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79687290 417 + 82825804 ggtggcgggcgcctgtagtcccagctactcgggaggctgaggcaggagaatagcgtgaacccgggaggcagagcttgtagtgagccaagattgtgcaactgcactccagcctgagagactaagcaagactccatctaaa----aaaaaaataaataaataagtaaaaTAaagaaacttaagcaaatttccaagaaaaaaaccaagcaactttattttg-----ttttgtttgattttgttttttgagatggagacttgctttgttgcccagccaggctggagtgctatggcacacaatctcggctcactgcaacctctgcctcctggggtcaagcaattctcctgtctcagcctcctgagtagctgggattacaggcacccacctgtaatccaccaccaagccaggccattatttttttatttttt i chlSab2.chr23 I 1 C 0 s colAng1.NW_012117422v1 134081 408 - 815015 ggtggcaagcgcctgtagtcccagctactcgggaggctgaggcaggaggatggcatgaacccaggaggcagagcttgtagtgagccaagattgtgcaactgcactccagcctgagagactgagcaagactccatctaaa--------aaataaataaataaataaaacaaagaaacttaagcaaatttccaagaaaaaaaccaagcaactttattttg-----ttttgtttgattttgttttttgagatgcagtctcgctctgttgc----ccaggctagagtgctatggcacacaatctcggctcactgcaacctctgcctcctggggtcaagcaattctcctgtctcagcctcctgagtaactgggattacaggcacccacctgtaatccaccaccaagccaggccattattttttttgta-tt i colAng1.NW_012117422v1 C 0 C 0 e rheMac8.chr6 3619951 898 - 180051392 I e macFas5.chr6 3806687 3308 - 181584905 I e manLeu1.NW_012103876v1 1644261 7299 - 1768974 I e panTro5.chr5 3434938 96397 - 181907262 I a score=443653.000000 s hg38.chr5_KI270795v1_alt 114505 144 + 131892 tttttagtagaaataaggttttgccatgttggccaggatggtctcgaacttctgacctcaggtgatctg---gcctcagcctcccaaagtgctgggattacaggcctgagccaccgcacccggccataaaacaacaatattccaaag s panTro5.chr5 178487385 147 + 181907262 tttttagtagagacagggtttcaccatgttggccaggctggtcttaaactcctgaccgcaggtgatccgcccacctcggcctctcaaagtgctgggattacaggcctgagccaccgcacccggccATAaaacaacaatattccaaag i panTro5.chr5 n 96397 C 0 s panPan2.chrUn_NW_014024182v1 22466 144 - 22698 tttttagtggaaacgaggttttgccatgttggccaggctggtctcgaacttctgacctcaggtgatctg---gcctcggcctcccaaagtgctgggattacaggcctgagccaccgcacccggccataaaacaacaatattccaaag i panPan2.chrUn_NW_014024182v1 C 0 C 0 s gorGor5.CYUI01000356v1 94501 144 + 152767 tttttagtagaaatgaggttttgccatgttggccaggctggtctcgaacttctgacctcaggtgatctg---gcctcggcctcccaaagtgctgggattacaggcctgagccaccgcacccggccataaaacaacaatattccaaag i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160345064 144 - 163208435 tttttagtagaaacgaggttttgccacgttggccaggctggtctcgaacttctgacctcaggtgatctg---gcctcggcctcccaaagtgctgggattacaggcctgagccaccgcatccggccATAAAACAACAATATTCCGAAG i nomLeu3.chr2 C 0 I 3337 s macNem1.NW_012020287v1 3829151 145 + 4899514 tttttagtagaaacagggttttgccatgttggccaggctggtcttgaacttctgacctcaggtgatctgctggcctcgg-ctcccaaagtgcggggattacaagcctgagccaccgcacct-gccataaaacaacaatattccaaag i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012001120v1 3553472 147 - 3647740 tttttagtagaaacggggttttgccatgttggccaggctggtcttgaacttctgacctcaggtgatctgctggcctcggcctcccaaagtgctgggattacaggcctgagccaccgcacccggccataaaacaacaatattccaaag i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79687707 147 + 82825804 tttttagtagaaacggggttttgccgtgttgcccaggctggtctcgaacttctgacctcaggtgatctgctggcctcagcctcccaaagtgctgggattacaggcctgagccaccgcacccggccataaaacaacaatattccaaag i chlSab2.chr23 C 0 C 0 s colAng1.NW_012117422v1 134489 147 - 815015 tttttagtagaaacggagttttgccatgttggccaggctggtctcgaacttctgacctcaggtgatctgctggcctcggcctcccaaagtgctgggattacaggcctgagccactgcacctggccataaaacaacaatattccaaag i colAng1.NW_012117422v1 C 0 C 0 e rheMac8.chr6 3619951 898 - 180051392 I e macFas5.chr6 3806687 3308 - 181584905 I e manLeu1.NW_012103876v1 1644261 7299 - 1768974 I a score=208788.000000 s hg38.chr5_KI270795v1_alt 114649 88 + 131892 tgagcaaagggcatgagcaaacacttttcaaaagaagacaaacttgaggccaaccagcatatgaaaaaaagcttggctaggcgcggtg s panTro5.chr5 178487532 88 + 181907262 tgagcaaagggcatgagcaaacacttttcaaaagaagacaaacttgaggccaaccagcatatgaaaaaaagcttggctaggcgcggtg i panTro5.chr5 C 0 C 0 s panPan2.chrUn_NW_014024182v1 22610 88 - 22698 tgagcaaagggcatgagcaaacacttttcaaaagaagacaaacttgaggccaaccagcatatgaaaaaaagctTGGCTAGGCGCGGTG i panPan2.chrUn_NW_014024182v1 C 0 N 0 s gorGor5.CYUI01000356v1 94645 88 + 152767 tgagcaaagggcatgagcaaacacttttcaaaagaagacaaacttgaggccagccagcatatgaaaaaaagcttggctaggcgcagtg i gorGor5.CYUI01000356v1 C 0 C 0 s macNem1.NW_012020287v1 3829296 87 + 4899514 tgagcaaagggcgtgaacaaacacttttcaaatgaagacgaacatgaggccaaccagcatatg-aaaaaagcttggacaggtgcggtg i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012001120v1 3553619 88 - 3647740 tgagcaaagggcgtgaacaaacacttttcaaatgaagacaaacatgaggccaaccagcatatgaaaaaaagcttggacaggtgcggtg i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79687854 88 + 82825804 tgagcaaagggcgtgaacaaacacttttcaaatgaagacaaacatgaggccaaccagcatatgaaaaaaagcttggacaggtgcggtg i chlSab2.chr23 C 0 C 0 s colAng1.NW_012117422v1 134636 88 - 815015 tgagcaaagggcatgaacaaacacttttcaaatgaagacaaacatgaggccaactagcatatgaaaaaaagcttggacaggtgcggtg i colAng1.NW_012117422v1 C 0 C 0 e nomLeu3.chr2 160345208 3337 - 163208435 I e rheMac8.chr6 3619951 898 - 180051392 I e macFas5.chr6 3806687 3308 - 181584905 I e manLeu1.NW_012103876v1 1644261 7299 - 1768974 I a score=153729.000000 s hg38.chr5_KI270795v1_alt 114737 102 + 131892 gctcacgcctgtaatcccagcacttt-gggaggccaaggcaggtgtatcacctgaggtcggcagttcaagaccagcctggcgaacatggtgaaaccc--gccccc s panTro5.chr5 178487620 104 + 181907262 gctcacgcctgtaatcccagcacttt-gggaggccaaggcaggtgtatcacctgaggtcggcagttcaagaccagcctggcgaacatggtgaaacccccgccccc i panTro5.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 94733 102 + 152767 gctcacgcctgtaatcccaacacttt-gggaggccaaggcaggtgtatcacctgaggtcggcagttcaagaccagcctggcgaacatggtgaaaccc--gccccc i gorGor5.CYUI01000356v1 C 0 C 0 s macNem1.NW_012020287v1 3829383 97 + 4899514 gctcacgcct-taatcccagcactttggggaggccgaggcaggtggatcacctgaggttggtagttcaggaccagcctggctagcatggtgaaac----atc--- i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012001120v1 3553707 97 - 3647740 gctcacgcctgtaatcccagcacttt-gggaggccgaggcggatggatcacctgaggttggtaattcaggaccagcctggctagcatggtgaaac----gtc--- i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79687942 97 + 82825804 gctcacgcctgtaatcccagcacttc-aggaggccgaggcgggtggatcacctgaggttggcagttcaggaccagcctggccagcatggtgagac----gtc--- i chlSab2.chr23 C 0 C 0 s colAng1.NW_012117422v1 134724 97 - 815015 gctcacgcctgtaatcccagcacctt-gagaggccgaggggggtggatcacctgaggctggcagttcaggaccagcttggccagcatggtgaaac----gtc--- i colAng1.NW_012117422v1 C 0 C 0 e nomLeu3.chr2 160345208 3337 - 163208435 I e rheMac8.chr6 3619951 898 - 180051392 I e macFas5.chr6 3806687 3308 - 181584905 I e manLeu1.NW_012103876v1 1644261 7299 - 1768974 I a score=116694.000000 s hg38.chr5_KI270795v1_alt 114839 53 + 131892 cc--aacccgtctctactaaaaatacaaaaattagctaagtgtggtgatgcatgt s panTro5.chr5 178487724 55 + 181907262 ccgcaacccgtctctactaaaaatacaaaaattagctgagtgtggtgatgcatgt i panTro5.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 94835 52 + 152767 c---aacccgtctctactaaaaatacaaaaattagctgagtgtggtaatgcatgt i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160348545 53 - 163208435 --CCAAcccgtctctactaaaaatacaaaaattagctgagtgtggtgatgcacgt i nomLeu3.chr2 I 3337 C 0 s macNem1.NW_012020287v1 3829480 49 + 4899514 ------cccatctctactaaaaatacaaaaattagctgagtgtggtgatgcatgt i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012001120v1 3553804 49 - 3647740 ------cccatctctactaaaaatacaaaaattagctgagtgtggtggtgcatgt i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79688039 49 + 82825804 ------cccgtctctactaaaaatacaaaaattagctgagtgtggtgatgcatgt i chlSab2.chr23 C 0 C 0 s colAng1.NW_012117422v1 134821 49 - 815015 ------cccgtctctactaaaaatacaaaaattagctgagtgtggtgatgcatgt i colAng1.NW_012117422v1 C 0 C 0 e rheMac8.chr6 3619951 898 - 180051392 I e macFas5.chr6 3806687 3308 - 181584905 I e manLeu1.NW_012103876v1 1644261 7299 - 1768974 I a score=167848.000000 s hg38.chr5_KI270795v1_alt 114892 59 + 131892 ctgtaatcccagctactcgggagggtgaggcaggagaactgcttgaa-ccgggaggcggg s panTro5.chr5 178487779 59 + 181907262 ctgtaatcccagctactcgggagggtgaggcaggagaactgcttgaa-ccgggaggcggg i panTro5.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 94887 59 + 152767 ctgtaatcccagctactcgggagggtgaggcaggagaattgcttgaa-ccgggaggcggg i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160348598 59 - 163208435 ctgtaatcccaggtactcaggagggtgaggcaggagaatcacttgaa-ccgggaggcggg i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3620849 60 - 180051392 ctgtagtcccagctacttgggagggtgaggcaggagaatggcgtgaacccagaaggcaaa i rheMac8.chr6 I 898 C 0 s macNem1.NW_012020287v1 3829529 60 + 4899514 ctgtgatcccagctactcgggagggtgaggcaggagaattgcttgaacccaggaggcaga i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012001120v1 3553853 60 - 3647740 ctgtgatcccagctactccggagggtgaggcaggagaattgcttgaacccaggaggcaga i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79688088 60 + 82825804 ctgtgatcccagctactcgggagggtgaggcaggagaactgcttgaacccaggagccaga i chlSab2.chr23 C 0 C 0 s colAng1.NW_012117422v1 134870 60 - 815015 ctgtgatcccagctactcgggagggtgaggcaggagaattgcttgaaccccggaggcaga i colAng1.NW_012117422v1 C 0 C 0 e macFas5.chr6 3806687 3308 - 181584905 I e manLeu1.NW_012103876v1 1644261 7299 - 1768974 I a score=256263.000000 s hg38.chr5_KI270795v1_alt 114951 67 + 131892 ggttgcagtgagccaagatggcaccactgcgctccagcctgggtgaaacagagcgagactctgtctt s panTro5.chr5 178487838 67 + 181907262 ggttgcagtgagccaagatggcaccattgcgctccagcctgggtgaaacagagcgagactctgtctt i panTro5.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 94946 67 + 152767 ggttgcagtgagccaagatggcaccattgcgctccagcctgggtgaaacagagcgagactctgtctt i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160348657 67 - 163208435 gattgcagtgagccaagatggcaccactgcgctccagcctgggtgaaacagagcgagactctctctt i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3620909 67 - 180051392 ggttgcagtgagccaagatcgcaccactgcgcttcagcctgagtgagacagagcgagattctgtctc i rheMac8.chr6 C 0 I 17 s macFas5.chr6 3809995 67 - 181584905 ggttgcagtgagccaagatcgcaccactgctcttcagcctgagtgagacagagcgagactctgtctc i macFas5.chr6 I 3308 I 16 s macNem1.NW_012020287v1 3829589 67 + 4899514 ggttgcagtgagccaagatcgcaccactgcgcttcagcctgagtgagacagagcgagactctgtctc i macNem1.NW_012020287v1 C 0 I 25 s cerAty1.NW_012001120v1 3553913 67 - 3647740 ggttgcagtgagccaagatcgcaccactgcacttcagcctgagtgagacagagtgagactctgtctc i cerAty1.NW_012001120v1 C 0 I 21 s chlSab2.chr23 79688148 67 + 82825804 ggttgcagtgagccaagattgcaccactgcgcttcagcctgagtgagacagagggagactctgtctc i chlSab2.chr23 C 0 I 24 s colAng1.NW_012117422v1 134930 67 - 815015 ggttgcagtgagccaagatcccaccgctgcgcttcagcctgggtgagacagagcgagactctgtctc i colAng1.NW_012117422v1 C 0 I 18 e manLeu1.NW_012103876v1 1644261 7299 - 1768974 I a score=1513545.000000 s hg38.chr5_KI270795v1_alt 115018 328 + 131892 aaaaaaagaaaagaaaagaaaagctcgatattactgatcattaaagaaatgcaaatcaaaaccacaatgagataccatatcgtatcagtcagaatggctattattaaaaaataaaaaaataacagatggtggcgaggttttggagaaaaaggaatgcttatacaccgttggcaggagtgtaaattagttcaaccattgtggaagacagtgtggtgatttctcaaagatataaatacagaaataccattccaccctgcaatcccattactgggtatatacccaaaggaaaataaattgt--tgttataaagacacaggcacaggtatgttt s panTro5.chr5 178487905 318 + 181907262 aaaaaaagaaaagaaaag-----ctcaatattactgatcattaaagaaatgcaaatcaaaaccacaatgagataccatatc-----agtcagaatggctattattaaaaaataaaaaaaaaacagatggtggcgaggttttggagaaaaaggaatgcttatacaccgttggcaggagtgtaaattagttcaaccattgtggaagacagtgtggtgatttctcaaagatataaatacagaaataccattccaccctgcaatcccattactgggtatatacccaaaggaaaataaattgt--tgttataaagacacaggcacagatatattt i panTro5.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 95013 319 + 152767 aaaa----aaaagaaaag-----ctcaatattactgatcattaaagaaatgcaaatcaaaaccacaatgagataccataccgtatcagtcagaatggctattattaaaaaataaaaaaataacagatggtggcgaggttttggagaaaaaggaatgcttatacaccgttggcaggagtgtaaattagttcaaccattgtggaagacagtgtggtgatttctcaaagatataaatacagaaataccattccaccctgcaatcccattactgggtatatacccaaaggaaaataaattgt--tgttataaagacacaggcacagatatgttt i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160348724 327 - 163208435 aaaaagaaaaaagaaaagaaaa-ctcaatattactgatcattaaagaaatgcaaatcaaaaccacaatgagataccatatcacatcagtcagaatggctattattaaaaaataaaaaaataacagatggtggcgaggttttggagaacaaggaatgcttatacaccgttggcaggagtgtaaattagttcaaccattgtggaagacagtgtggtgatttctcgaagatataaatacagaaataccattccacccagcaatcccattgctggttatacacccaaaggaatataaattgt--tgttataaagacacaggcacatatatgttt i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3620993 329 - 180051392 gaaaaggaaaaaGAAaagaaaagctcaatattactgatcattaaagaaatgcaaatcaaaaccatgatgagataccatatctcatcagtcag-atggctattgttaaaaaataaaagaataacagatggtgtcgaggttatggagaaaaaggaatgcttatgcacccttggcaggagtgtaaattagttcaaccattgtgggagacagtgtggtgatttctcaaagatatcaatacagaaataccattccacccagcagtcccattactgggtatatacccaaaggaatataaattgttctgttataaagacacaggcacatatatgctt i rheMac8.chr6 I 17 C 0 s macFas5.chr6 3810078 330 - 181584905 gaaaaggaaaaaGAAaagaaaagctcaatattactgatcattaaagaaatgcaaatcaaaaccatgatgagataccatatcacatcagtcagaatggctattgttaaaaaataaaagaataacagatggtggcgaggttatggagaaaaaggaatgcttatgcacccttggcaggagtgtaaattagttcaaccattgtgggagacagtgtggtgatttctcaaagatatcaatacagaaataccattccacccagcagtcccattactgggtatatacccaaaggaatataaattgttctgttataaagacacaggcacatatatgctt i macFas5.chr6 I 16 C 0 s macNem1.NW_012020287v1 3829681 330 + 4899514 gaaaaggaaaaagaaaagaaaagctcaatattactgatcattaaagaaatgcaaatcaaaaccatgatgagataccatatcacatcagtcagaatggctattgttaaaaaataaaagaataacagatggtggcgaggttatggagaaaaaggaatgcttatgcacccttggcaggagtgtaaattagttcaaccattgtgggagacagtgtggtgatttctcaaagatatcaatacagaaataccattccacccagcagtcccattactgggtatatacccaaaggaatataaattgttctgttataaagacacaggcacatatatgctt i macNem1.NW_012020287v1 I 25 C 0 s cerAty1.NW_012001120v1 3554001 330 - 3647740 gaaaaggaaaaagaaaagaaaagctcaatattactgatcattaaagaaatgcaaatcaaaaccatgatgagataccatatcacatcagtcagaatggctattgttaaaaaataaaagaataacagatggtggcgaggttgtggagaaaaaggaatgcttatgcacccttggcaggagtgtaaattagttcaaccattgtgggagacagtgtggtgatttctcaaagatatcaattcagaaataccattccacccagcagtcccattactgggtatatacccaaaggaatataaattgttctgttatcaagacacaggcacatatatgctt i cerAty1.NW_012001120v1 I 21 C 0 s chlSab2.chr23 79688239 330 + 82825804 gaaaaggaaaaagaaaagaaaagctcaatattactgatcattaaagaaatgcaaatcaaaaccacaatgagataccatatcacatcagtcagaatggctattgttaaaaaataaaagaataacagatggtggcgaggttgtggagaaaaaggaatacttatgcacccttggcaggagcgtaaattagttcaaccattgtgggggacagtgtggtgatttctcaaagatatcaatacagaaataccattccacccagcagtcccattactgggtatatacccaaaggaatagaaattgttctgttataaagacacaggaacacatatgttt i chlSab2.chr23 I 24 C 0 s manLeu1.NW_012103876v1 1651560 330 - 1768974 aaaaaaaaaaaagaaaagaaaagctcaatattactgatcattaaagaaatgcaaatcaaaaccatgatgagataccatatcacatcagtcagaatggctactgtaaaaaaataaaagaataacagatggtggcgaggttgtggagaaaaaggaatgcttatgcaccctcggcaggagtgtaaattagttcaaccattgtgggagacagtgtggtgatttctcaaagatatcaatacagaaataccattccacccagcagtcccattactgggtatatacccaaagcaatataaattgttctgttgtcaagacacaggcacatatatgctt i manLeu1.NW_012103876v1 I 7299 C 0 s colAng1.NW_012117422v1 135015 330 - 815015 gaaaaggaaaaagaaaagaaaagctcaatattactgatcattaaagaaatgcaaatcaaaaccacaatgagataccatatcacatcagtcagaatggctattattaaaaagttaaaaaataacagatggtggcgaggttgtggggaaaaaggaatgcttatgcacccttggcaggagtgtaaattagttcaaccattgtgggagacagtgtggtgatttctcaaagatatcaatacagaaataccattccacccagcagtcccattactgggtatatacccaaaggaatagaaattgttctgttataaagacacaggcacatatatgttt i colAng1.NW_012117422v1 I 18 C 0 a score=98218.000000 s hg38.chr5_KI270795v1_alt 115346 29 + 131892 attgcagcactattcac-------agtagca---------------------------aaga--A s panTro5.chr5 178488223 31 + 181907262 attgcagcactattcac-------agtagca---------------------------aagataA i panTro5.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 95332 30 + 152767 attgcagcactattcac-------agtagca---------------------------aaga-AA i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160349051 30 - 163208435 attgcagcactactcac-------aatagca---------------------------aagG-AA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3621322 40 - 180051392 attgcagcactattcac-------aataaca------------------aataataataataata i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3810408 40 - 181584905 attgcagcactattcac-------aataaca------------------aataataataataata i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3830011 58 + 4899514 attgcagcactattcac-------aataacaaataataataataataataataataataataata i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012001120v1 3554331 31 - 3647740 attgcagcactattcac-------aataaca---------------------------aaTAATA i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79688569 40 + 82825804 attgcagcactattcac-------aataaca------------------aataataataataata i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1651890 31 - 1768974 attgcagcactattcac-------aataaca---------------------------aaTAATA i manLeu1.NW_012103876v1 C 0 C 0 s colAng1.NW_012117422v1 135345 34 - 815015 attgcagcactattcac-------aataaca------------------------aaTAATAATA i colAng1.NW_012117422v1 C 0 C 0 s saiBol1.JH378186 17916 36 + 10068113 attgcagcactgcactccagcctgggcaaca---------------------------gagca-- i saiBol1.JH378186 N 0 C 0 a score=13688.000000 s hg38.chr5_KI270795v1_alt 115375 3 + 131892 AAA s panTro5.chr5 178488254 3 + 181907262 AAA i panTro5.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 95362 3 + 152767 AAA i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160349081 3 - 163208435 AAA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3621362 3 - 180051392 ata i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3810448 3 - 181584905 ata i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3830069 3 + 4899514 ata i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012001120v1 3554362 3 - 3647740 ATA i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79688609 3 + 82825804 ata i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1651921 3 - 1768974 ATA i manLeu1.NW_012103876v1 C 0 C 0 s colAng1.NW_012117422v1 135379 3 - 815015 ATA i colAng1.NW_012117422v1 C 0 C 0 s calJac3.chr2 140347898 3 - 204313951 aaa i calJac3.chr2 N 0 C 0 s saiBol1.JH378186 17952 3 + 10068113 aga i saiBol1.JH378186 C 0 I 9 s aotNan1.NW_018505037v1 2573727 3 + 3417841 aaa i aotNan1.NW_018505037v1 N 0 C 0 a score=2505391.000000 s hg38.chr5_KI270795v1_alt 115378 308 + 131892 AAAAAGACTCCAGGAGGC---GTCCCTGGGAGAC-TTTCTCCAGCCTCATAGCCCATCTTGCGCCCAAGTGACAGCACGTGGCTTTCCTTTTGTGAGGGGAGCCCATGGGATTCACTCCCTTTTCCTATTTCCTCCGGGGTGAAGCCTCATGTGTCGGGACAATGTGGGATCAGGGACTGTCTGGGTGACCCTGGCGAGCCTCTCCTCACGGAGTTCTAGCGGCCATCAGGGAAAGGGGAGCACGCCCAGGGCGGCCGCCCCCAGGGGTGTTTGGATACAGGCCAGGAGCAGGCTGCTCTGTGATGGTGGG-G s panTro5.chr5 178488257 308 + 181907262 AAAAAGACTCCAGGAGGC---GTCCCTGGGAGCC-TTTCTCCAGCCTCATAGCCCATCTTGCGCCCAAGTGATAGTGTGTAGCTTTCCTTTTGTGAGGGGAGCCCACGGGATTCACTCCCTTTTCCTATTTCCTCCGGGGTGAAGCCTCATGTGTCGGGACAATGTGGGATCAGGGACTGTCTGGGTGACCCTGGCGAGCCTCTCCTCACGGAGTTCTAGCGGCCATCAGGGAAAGGGGAGCACGCCCAGGGCGGCCGCCCCCAGGGGTGTTTGGATACAGGCCAGGAGCAGGCTGCTCTGTGATGGTGGG-G i panTro5.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 95365 309 + 152767 AAAAAGACTCCAGGAGGC---GTCCCTGGGAGACTTTTCTCCAGCCTCATAGCCCATCTTGCGCCCAAGTGATAGCGTGTAGCTTTCCTTTTGTGAGGGGAGCCCACGGGATTCACTCCCTTTTCCTATTTCCTCCGGGGTGAAGCTTCATGTGTCGGGACAATGTGGGATCAGGGACTGTCTGGGTGACCCTGGCGAGCCTCTCCTCACGGAGTTCTAGCAGCCATCAGGGAAAGGGGAGCACACCCAGGGCGGCCGCCCCCAGGGGTGTTTGGATACAGGCCAGGAGCAGGCTGCTCTGTGATGGTGGG-G i gorGor5.CYUI01000356v1 C 0 I 2 s nomLeu3.chr2 160349084 307 - 163208435 AAAAAGACTCCAGGAGGC---ATCCCTGGGAGCT-TTACTCCAGCCTCATAGCCCGCCTTGCGCCCAAGTGATAGCGTGTAGCTTTCCTGTTGTGAGGGGAGCCAGTGGGATTCACGCCCTTTTCCTATTTCCTCCGGGGTGAAACCTCGTGTGTTGGGACAATGTGGGGTCAGGGACTGTCTGGGTGACCCTGG-GAGCCTCTCTTCACGGAGTTCTAGCGGCCATCAGGGAAAGGGGAGCACGCCCAGGGCGGCCGCCCCCAGGGGTGTTTGGATACAGGCCAGGAGCAGGCTGCTCTGTGATGATGGG-G i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3621365 307 - 180051392 ataaAGACTCCAGGAGGC---GTCCCTGGGAGCC-TTTCTCCAGCCTCATAGCCCACCTTGCATCCAAGTGACAGTATGTAGCTTTCCTTTTGTGAGGGGAGCCCGTGGGATTCACTCCCTTTTCCTATTTCCTCTGGGGTGAAGCCTCATGTGTTGGGACAATGTGGGGTCAGGGACTATCTGGGTGACCCTGGCGAGCCTCTCCCCATGGAGTTCTAGGGGCCATCAAGGCAAGGGGAGTACACCCAGGGCAGCCGTCCCCAGGGGTGTTTGGATACAGGCCAGGAGCAGGCTGCTTTGTGATGGTTGG-- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3810451 307 - 181584905 ataaAGACTCCAGGAGGC---GTCCCTGGGAGCC-TTTCTCCAGCCTCATAGCCCACCTTGCATCCAAGTGACAGTATGTAGCTTTCCTTTTGTGAGGGGAGCCCGTGGGATTCACTCCCTTTTCCTATTTCCTCTGGGGTGAAGCCTCATGTGTTGGGACAATGTGGGGTCAGGGACTATCTGGGTGACCCTGGCGAGCCTCTCCCCATGGAGTTCTAGGGGCCATCAAGGCAAGGGGAGTACGCCCAGGGCAGCCGTCCCCAGGGGTGTTTGGATACAGGCCAGGAGCAGGCTGCTTTGTGATGGTTGG-- i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3830072 307 + 4899514 ataaAGACTCCAGGAGGC---GTCCCTGGGAGCC-TTTCTCTAGCCTCATAGCCCACCTTGCATCCAAGTGACAGTATGTAGCTTTCCTTTTGTGAGGGGAGCCCGTGGGATTCACTCCCTTTTCCTATTTCCTCTGGGGTGAAGCCTCATGTGTTGGGACAATGTGGGGTCAGGGACTATCTGGGTGACCCTGGCGAGCCTCTCCCCATGGAGTTCTAGGGGCCATCAAGGCAAGGGGAGTACGCCCAGGGCAGCCGTCCCCAGGGGTGTTTGGATACAGGCCAGGAGCAGGCTGCTTTGTGATGGTTGG-- i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012001120v1 3554365 307 - 3647740 ATAAAGACTCCAGGAGGC---GTCCCTGGGAGCC-TTTCTCCAGCCTCATAGCCCACCTTGCATCCAAGTGACAGCATGTAGCTTTCCTTTTGTGAGGGGAGCCCGTGGGATTCACTCCCTTTTCCTATTTCCTCCGGGGTGAAGCCTCGTGTGTCAAGACAATGTGGGGTCAGGGACTATCTGGGTGACCCTGGCGAGCCTCTCCCCACGGAGTTCTAGGGGCCATCAGGGCAAGGGGAGTACGCCCAGGGCGATCGCCCCCAGGGGTGTTTGGATACAGGCCAGGAGCAGGCTTCTTTGTGATGGTTGG-- i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79688612 307 + 82825804 ataaAGACTCCAGAAGGC---GTCCCTGGGAGCC-TTTCTCCAGCCTCAGAGCCCACCTTGCATCCAAGTGACAGCATGTAGCTTTCCTTTTGTGAGGAAAGCCCGTGGGATTCACTCCCTTTTCCTGTTTTCTCCGGGGTGAAGCCTCGTGTGTCAGGACAATGTGGGGTCAGGGACTGTCTGGCTGACCCTGGCGAGCCTCTCCCCACGGAGTTCTAGGTGCTATCAGGGCAAGGGGAGTACGCCCAGGGCGGTCGCCCCCAGGGGTGTTTGGATACAGGCCAGGAGCAGGCTACTTTGGGATGGTTGG-- i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1651924 307 - 1768974 ATAAAGACTCCAGGAGGC---GTCCCTGGGAGCC-TTTCTCCAGCCTCATAGCCCACCTTGCATCCAAGTGACAGCATGTAGCTTTCCTTTTGTGAGGGGAGCCCGTGGGATTCCCTCCCTTTTCCTGTTTCCTCCGGGGTGAAGCCTGGTGTGTCAGGACAATGTGGGGTCAGGGACTATCTGGCTGACCCTGGCGAGCCTCTCCCCACGGAGTTCTAGGAGCCATCAGGGCAAGGGGAGTACGCCCAGGGCGGTCGCCCCCAGGGGTGTTTGGATACAGGCCAGAAGCAGGCTGCTTTGTGATGGTTGG-- i manLeu1.NW_012103876v1 C 0 C 0 s colAng1.NW_012117422v1 135382 301 - 815015 ATAAAGACTCCAGGAGGC---GTCCCTGGGAGCC-TTT-------CTCATAGCCCACCTTGCATCCAAGTGACAGCATGTAGCTTTCCTTTTGTGGGGGGAGCCCGTGGGATTCACTCCCTTTTCCTGTTTCCTCCGGGGTGAAGCCTCGTGTGTCAGGACAATGTGGGGTCAGGGACTATCTGGGTGACCCTGGCGAGCCTCTCCCCACAGAGTTCTAGGGGCCATCAGGGCAAGGGGAGTACGCCCAGGGCGGTCACCCCCAGGGGTGTTTGGATACAGGCCAGGAGCAGGCTGCTTTGTGATGGTTGGG- i colAng1.NW_012117422v1 C 0 I 28 s calJac3.chr2 140347901 305 - 204313951 aagaaGACTCCAGGAGGCGTGGTCCTTGGGAGC--TTTCTCCAGCCTCATAGCCCACCTTGCACCCAAGTGAC---ATACAGCTTTCCTTGTGTGAGGGGAGCCCATGGGATTCACTCCCTTTTCCTATTTCCTCTGGAGTGAAGCCTCATGTGTTGGGAGAATGTGGGTTCAGGGACTCTCTGAGTGACCCTGGTAAGCCTCTCTCTCCAGAGTTCAAGGGAGCATCAGGGGAAGGGGAACACACCCAGAGCAG-CGCCCACAAGAGTGTTTTAATACAGGTCAGGTACGGACTGCTCTGCGATGGTGGG-- i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 17964 307 + 10068113 aaaaaGACTCCAGGAGGCGTGGTCCTTGGGAGCT-TTTCTCCAGCCTCACAGCCTACCTTGCACCCAAGCGACAG-ATACAGCTTTCCTTGTGTGAGGGGAGCCCATGGGATTCACTCCCTTTTCCTATTTCCTCCGGAGTGAAGCCTCATGTGTTGGGACAGTGTGGGTTCAGGGACTCTCTGGGTGACCCTGGTGAGCCTCTCTCCCCAGAGTTCTAGGGAGCATCAGTGCAAGGGAAACACAGCCAGAGCAGCCGCCCCC--GAGTGTTTTGATACAGGTCAGGTACGGGCTGCTCTGTGATGGTGGG-- i saiBol1.JH378186 I 9 C 0 s cebCap1.NW_016108322v1 75158 309 + 99478 aaaaaGACTCCAGGAGGCGTGGTCCTTGGGAGCT-TTCCTCCAGCCTCATAGCCCACCTTGCTCCCAAGTGACAG-ATACAGCTTTCCTTGTGTGAGGGGAGCAGATGGGATTCACTCCCTTTTCCTATTTCCTCTGGAGTGAAGCCTCATGCGTTGGGACAGTGTGGGTTCAGGGACTCTCTGGGTGACCCTGGTGAGCCTCTTTCCCCAGAGTTCTAGGGAGCATCAGGGCAACGGGAACACACCCAGAGCAGCCGCCCCCAAGAGTGTTTTGATACAGGCCAGGTACCGGCTGCTGTGCGATGGTGGG-- i cebCap1.NW_016108322v1 N 0 C 0 s aotNan1.NW_018505037v1 2573730 309 + 3417841 aagaagaCTCCAGGAGGCGTGGTCCTTGGGAGCT-TTTCTCCAGCCTCAGAGCCCACCTTGCACCCAAGTGACAG-ATATAGCTTTCCTTATGTGAGGGGAGCCCATGGGATTCACTCCCTTTTCCTGTTTCCTCTGGAGTGAAGCCTCATGTGTTGGGACAATGTGGGTTCAGGGACTCTCTGGGTGACCCTGGCGAGCCTTTCTCCCCAGAGTTCTAGGGAGCATCAGGGCAAGGGGAACACACCCAGAGCAGCCGCCCCCAAGAGTGTTTGGATACAGGCCAGGTATGGGCTGCTCTGCGATGGTGGG-- i aotNan1.NW_018505037v1 C 0 C 0 a score=151816.000000 s hg38.chr5_KI270795v1_alt 115686 29 + 131892 CGGGGGG-TGATAAGACTCCCCTG-AGAGGC s panTro5.chr5 178488565 30 + 181907262 GGGGGGGGTGATGAGACTCCCCTG-AGAGGC i panTro5.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 95676 30 + 152767 GGGGAGGGTGATGAGACTCCCCTG-AGAGGC i gorGor5.CYUI01000356v1 I 2 C 0 s nomLeu3.chr2 160349391 26 - 163208435 GAGG----TGATGAGACTCCCCTG-AGAGGC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3621672 29 - 180051392 -GGGAGG-TAATGAGACTCCCCCGCCAAGGC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3810758 29 - 181584905 -GGGAGG-TAATGAGACTCCCCCGCCAAGGC i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3830379 29 + 4899514 -GGGAGG-TAATGAGACTCCCCCGCCAAGGC i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012001120v1 3554672 29 - 3647740 -GGGAGG-TAATGAGACTCCCCCGCCAAGGC i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79688919 29 + 82825804 -GGGAGG-TAATGAGACTCCCCCGCCGAGGC i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1652231 29 - 1768974 -GGGAGG-TAATGAGACTCCCCCGCCAAGGC i manLeu1.NW_012103876v1 C 0 C 0 s calJac3.chr2 140348206 28 - 204313951 -GGAAGG-TGATGAGGGTCCCCTG-AGAGGC i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 18271 28 + 10068113 -GGAAGG-TGATGAGGGTCCCCTG-AGAAGC i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016108322v1 75467 28 + 99478 -GGAAGG-TGATGAGGGTCCCCCG-AGAGGC i cebCap1.NW_016108322v1 C 0 C 0 s aotNan1.NW_018505037v1 2574039 28 + 3417841 -GGAAGG-TGATGAGGGTCCCCTG-AGAGGC i aotNan1.NW_018505037v1 C 0 C 0 e colAng1.NW_012117422v1 135683 28 - 815015 I a score=3986272.000000 s hg38.chr5_KI270795v1_alt 115715 477 + 131892 TCCCTTCGGTGCTGGAAAGATGGGACATGGGGAACCGCCTCCTGCCTGGACCTGTTGATGCCCAGAGCCACTCCCCTGGGTCCTCATCGCTCCTTCCAGGCAGTGAGGATGTGGGTTTCCAGGGGAATCCAGGCCTTTAGGGAGAGTGGGAATCTGACT------TTGATCTTGCAGCTCC-GCATTTTTCCTGCACATTTGCTGATTAGTTTATGCCTGTCAGGGGCCTCAGGGCCAGTGCTAAGTCCCAGGGTCTTAGGGTAGGAAAGATGATTCCCCAGATTTCCTGCAGGCATTTGAGCATGGTGGAAGGATCAGTGGAGCCTCCAGTGAAACTTGGCAGATTGCGCACTTCATTTATTTTCACTCTCCCAGGATCCTTCCCAA--ATTATCATAAATAAACAGAGAATTCTGAAACCTACAAAGAAAAATACAGCAAAAGAACAATGAATCAGTTTCAAAGCCTAGGCAGAGAGGCCGTAG s panTro5.chr5 178488595 477 + 181907262 TCCCTTGGGTGCTGGAAAGATGGGACTTGGGGAACTGCCTCCTGCCTGGACCAGTTGATGCCCAGAGCCACTCCCCTGGGTCCTCATAGCTCCTTCCAGGCAGTGGGGATGTGGGTTTCCAGGGGAATCCAGGCCTTTAGGGAGAGTGGGAATCTGACT------TTGGTCTTGCAGCTCC-GCATTTTTCCTGCACGTTTGCTGATTAGTTTATGCCTGTCAGGGGCCTCAGGGCCAGTGCTCAGTCCCAGGGTCTTAGGGTAGGAAAGATGATTCCCCAGATTTCCTGCAGGCATTTGAGCATGGTGGAAGGATCAGTGGAGACTCCAGTGAAACTTGGCAGATTGAACACTTCATTTATTTTCACTCTCCCAGGATCCTTCCCAA--AGTATCATAAACAAACAGAGAATTCTGAAACCTACAAAGAAAAATACAGCAAAAGAACAATGAATCAGTTTCAAAGCCTAGGCGGAGAGGCCGTAT i panTro5.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 95706 475 + 152767 TCCCTTGGGCGCTGGAAAGATGGGACATGGGGAACCGCCTCCTGCCTGGACCACTTGATGCCCAGAGCCACTCCTCTGGGTCCTCATCGCTCCTTCCAGGCAGTGAGGATGTGGGTTTCCAGGGGAATCCAGGCCTTTAGGGAGAGTGGGAATCTGACT------TTGATCTTGCAGCTCC-GCATTTTTCCTGCACATTTGCTGATTAGTTTATGCCTGTCAGGGGCCTCAGGG-CAGTGCTCAGTCCCAGGATCTTAGGGTAGGAAAGATGATTCCCCAGATTTCCTGCAGGCATTTGAGC-TGGTGGAAGGATCAGTGGAGCCTCCAGTGAAACTTGGCCGATTGAGCACTTCATTTATTTTCACTCTCCCAGGATCCTTCCCAA--ATTATCATAAATAAACAGAGAATTCTGTAACCTACAAAGAAAAATACAGCAAAAGAACAATGAATCAGTTTCAAAGCCTAGGCAGAGAGGCCGTAG i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160349417 454 - 163208435 TGCCTTGGGCGCTGGGAAGATGGGATATGGGGAACCGCCTCCAGCCTGGACCAGTTGATGCCCAGAGCCA--------------CATCCCTCCTTCCAGGCAGTGGGGACGTGGGTTTCCAGGGGAATCCAGGCCTTTAGGGAGAGTGGGCATCTGACTTTGATCTTGATCTTGCAGCTCC-GCATTTTTCCTGCACATTTGCTGATTAGTTTATGCCTGTCAGGGGCCTCAGGGCCAGTG--------------CTTAGGGTAGGAAAGATGATTCCTCAGATTTCCTGCAGGCATTTGAGCATGGTGGAAGGATCAGTGGGGCCTCCAGTGAAACTCGGCAGATTGAGCCCTTCATTTGTTTTCACTCTCCCAGGATCCTTCCCAA--ATTATCATAAATAAACAGAGAATTCTGAAACTTACAAAG-AAAATACAGCAAAAGAACAATGAATCAGTTTCAAAGCCTAAGCGGAGAGGCCGTAG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3621701 479 - 180051392 TCCCTTGGGCACTGGGAAGATGGGACATCTGGAACCGCCTCCTGCCTGGACCAGTTGATGCCCAGAGCCACTCCCTTGGGTCCTCACCCCTCCTTCCAGGCAGTGGGGACGTGGGTTTCCAGGGGAATCCAGGCCTTTAGGGAGAGTGGGAATCTGACT------TTGATCTTACAGCTCC-GCATTTTTCCTGCACATTTGCTGATTAGTTTATGCCTGTCAGGGGCCTCAGGGCCAGTGCTAAGTCCCAGGGTCTTAGGGTAGGAAAGATGATTCCTCAGATTTCCTGCAGGCATTCGAGCATGGTGGAAGGATCAGTGGAGCCTCCGGTGAAACTTGGCAGATTGAGCACTTCATTTATTTTCACTCTTACAGGATCCTTCCAAAAGATTATCATAAATAAATAGAGAATTCTGAAACCTACAAAGAAAAATACAGCAAAAGAGCAATGAATCAGTTTCAAAGGCTAGGCGGAGAGGCTGTAG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3810787 479 - 181584905 TCCCTTGGGCACTGGGAAGATGGGACATCTGGAACCGCCTCCTGCCTGGACCAGTTGATGCCCAGAGCCACTCCCTTGGGTCCTCACCCCTCCTTCCAGGCAGTGGGGACGTGGGTTTCCAGGGGAATCCAGGCCTTTAGGGAGAGTGGGAATCTGACT------TTGATCTTACAGCTCC-GCATTTTTCCTGCACATTTGCTGATTAGTTTATGCCTGTCAGGGGCCTCAGGGCCAGTGCTAAGTCCCAGGGTCTTAGGGTAGGAAAGATGATTCCTCAGATTTCCTGCAGGCATTCGAGCATGGTGGAAGGATCAGTGGAGCCTCCGGTGAAACTTGGCAGATTGAGCACTTCATTTATTTTCACTCTCACAGGATCCTTCCAAAAGATTATCATAAATAAATAGAGAATTCTGAAACCTACAAAGAAAAATACAGCAAAAGAGCAATGAATCAGTTTCAAAGGCTAGGCGGAGAGGCTGTAG i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3830408 479 + 4899514 TCCCTTGGGCACTGGGAAGATGGGACATCTGGAACCGCCTCCTGCCTGGACCAGTTGATGCCCAGAGCCACTCCCTTGGGTCCTCACCCCTCCTTCCAGGCAGTGGGGATGTGGGTTTCCAGGGGAATCCAGGCCTTTAGGGAGAGTGGGAATCTGACT------TTGATCTTACAGCTCC-GCATTTTTCCTGCACATTTGCTGATTAGTTTATGCCTGTCAGGGGCCTCAGGGCCAGTGCTAAGTCCCAGGGTCTTAGGGTAGGAAAGATGATTCCTCAGATTTCCTGCAGGCATTCGAGCATGGTGGAAGGATCAGTGGAGCCTCCGGTGAAACTTGGCAGATTGAGCACTTCATTTATTTTCACTCTCACAGGATCCTTCCAAAAGATTATCATAAATAAATAGAGAATTCTGAAACCTACAAAGAAAAATACAGCAAAAGAGCAATGAATCAGTTTCAAAGGCTAGGCGGAGAGGCTGTAG i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012001120v1 3554701 479 - 3647740 TCGCTTGGGCACTGGGAAGATGGGACATCTGGAACCGCCTCCTGCCTGGACCAGTTGATGCCCAGAGCCACTCCCTTGGGTCCTCACCCCTCCTTCCAGGCAGTGGGGACGTGGGTTTCCAGGGGAATCCAGGCCTTTAGGGAGAGTGGGAATCTGACT------TTGATCTTACAGCTCC-GCATTTTTCCTGCACATTTGCTGATTAGTTTATGCCTGTCAGGGGCCTCAGGGCCAGTGCTAAGTCCCAGGGTCTTAGGGTAGGAAAGATGATTCCTCAGATTTCCTGCAGGCATTCGAGCATGGTGGAAGGATCAGTGGAGCCTCCGGTGAAACTTGGCAGATTGAGCACTTCATTTATTTTCACTCTCACAGGATCCTTCCAAAAGATTATCACAAATAAATAGAGAATTCTGAAACCTACAAAGAAAAATACAGCAAAAGAACAGTGAATCAGTTTCAAAGCCTAGGCGGAGAGGCCGTAG i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79688948 468 + 82825804 TCCCTTGGGCGCTGGGAAGATGGGACATCTGGAACCGCCTCCTGCCTGGACCAGTTGATGCTCAGAGCCACTCCCTTGGGTCCTCACCCCTCCTTCCAGGCAGTGGGGACGTGGGTTTCCAGAGGAATCCAGGCCTTTAGGGAGAGTGGGAATCTGACT------TTGATCTTACAGCTCC------------GCACATTTGCTGATTAGTTTATGCCTGTCAGGGGCCTCAGGGCCAGTGCTAAGTCCCAGGGTCTTAGGGTAGGAAAGATGATTCCTCAGACTTCCTGCAGGCATTCGAGCATGGTGGAAGGATCAGTGGAGCCTCCGGTGAAACTTGGCAGATTGAGCACTTCATTTATTTTCACTCTCACGGGATCGTTCCAAAAGATTATCATAAATAAATAGAGAATTCTGAAACCTACAAAGAAAAATACAGCAAAAAACCAGTGAATCAGTTTCAAAGCCTAGGCGGAGAGGCCATAG i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1652260 478 - 1768974 TCCCTTGGGCACTGGGAAGATGGGACATCTGGAACCGCCTCCTGCCTGGACCAGTTGATGCCCAGAGCCACTCCCTTGGGTCCTCACCCCTCCTTCCAGGCAGTGGGGACGTGGGTTTCCAGGGGAATCCAGGCCTTTAGGGAGAGTGGGAATCTGACT------TTGATCTTACAGCTCC-GCATTTTTCCTGCACATTTGCTGATTAGTTTATGCCTGTCAGGGGCCTCAGGGCCAGTGCTAAGTCCTAGGGTCTTACGGTAGGAAAGATGATTCCTCAGATTTCCTGTAGGCATTCGAGCATGGTGGAAGGATCAGTGGAGCCTCCGGTGAAACTTGGCAGATTGAGCACTTCATTTATTTTCACTCTCACAGGATCCTTCCAAAAGATTATCACAAATAAATAGAGAATTCTGAAACCTACAAA-AAAAATACAGCAAAAGAGCAATGAATCAGTTTCAAAGCCTAGGTGGAGAGGCCATAG i manLeu1.NW_012103876v1 C 0 C 0 s colAng1.NW_012117422v1 135711 462 - 815015 TCCCTTGGGCGCTGGGAAGATGGGATATCTGGAACC-----------------GTTGATGCCCAGAGCCACTCCCTTGGGTCCTCATCCCTCCTTCCAGGCGGTGGGGACGTGAGTTTCCAGGGGAATCCAGGGCTTTAGAGAGAGTAGGAATCTGACT------TTGATCTTACAGCTCT-GCATTTTTCCTGCACATTTGCTGATTAGTTTATGCCTGTCAGGGGCCTCAGGGCCAGTGCCAAGTCCCAGGGTCTTAGGGTAGGAAAGATGATTCCTCAGATTTCCTGCAGGCATTCGAGCATGGTGGAAGGATCAGTGGAGCCTCCGGTGAAATTTGGCAGATTGAGCACTTCATTTATTTTCACTCTCACAGGATCCTTTCAAAAGATTATCATAAATAAATAGAGAATTCTGAAACCTACAAAGAAAAATACAGCAAAAGAGCAGTGAATCAGTTTCAAAGCCTAGGCAGAGAGGCCGTAG i colAng1.NW_012117422v1 I 28 C 0 s calJac3.chr2 140348234 475 - 204313951 TCCCTTGGGCACTGGAAAGGTGGGATATGGGGAGCCGCCTCCTGCCTGGACCAGTTAATGCCCAAAGCCATTCCCTTGGGTCCTCACCCCTCCTTCCAGGCAGTGGGGCCATGGGTTTCTAGGGGAATACAGGCCTTTAGGGAGACTGGGAATCTGACT------TTGATCTTGCAGCTCCCGAATTTTTCCTGCACATTTGCTGATTAGTTGATGCCTGTCAGGGGCCTCAGGGCCAGTGCTAAGCCCCAGGGTCTTAGGGTAGGAAAGATGATTCCCCAGATTTCCTGCAGGC-TTTGAGCATGGTGGAAGAATCAGTGGAGCCTCCAGTGAAACTTGGCAGATTGAGCATTTCATTTATTTTCGCTCTCACAGGATCCTTCCAAA--ATTATCATTAGTAAATAGAAAATTCTGAAACCTGCAAAGAAAAATACAGCAAAAGAACAACGAATCAG--TCAAAGCCTAGGAGGAGAGGCCGTAG i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 18299 443 + 10068113 TCCCTTAGGCACTGGAAAGGTGGGATATGGGGAGCCGCCTCCCGCCTGGACCAGTTAATGCCCAGAGCTGTTCCCTTGGGTCCTCATCCCTCCTTCGAGGCAGTGGGGCCACGGGTTTCTAGGGGAATCCAGGCCTTTAGGGAGACTGGGAATCCGACT------TTGATCTTGCAGCTCCCGCATTTTCCCTGCACTTTTGCTGATTCGTTTATGCCTGTCAGGGGCCTCAGGGCC---------------GGTCTTAGGGTAGGAAAGATGATTCCCCAGATTTCCTGCAGGC-TTTGAGCACGGTGGAAGGATCCGTGGAGCCTCCAGTGAAACTTGGCAGATTGAGCATTTCATTTATTTTCGCTC-----------------A--ATTATGATTAGTAAATAGAAAATTCTGAAACCTACAAAGAAAAATACAGCAAAAGAACAACGAATCAG--TCAAAGCTTAGGAGGAGAGGCCACAG i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016108322v1 75495 475 + 99478 TCCCTTGGGCACGGGAAAGGTGGGATATGGGGAGCCGCCTCCTGCCTGGACCAGTTAATGCCCAGAACCGTTCCCTTGGGTCCTCATCCCTCCTTCCAGGCAGTGGGGCCATGGGTTTCTAGGGGAATCCAGGCCTTCAGGGAGACTGGAAATCTGACT------TTGATCTTGCAGCTCCCGCATTTTTCCTGCACTTTTGCTGATTAGTTTATGCCTGTCGGGGGCCTCAGGGCCAGTGCTAAGCCCCAGCGTCTTAGGGAAGGAAAGATGATTCCCCAGATTTCCTGCAGGC-TTTGAGCACGGTGGAAGGATCAGTGGAGCCTCCAGTGAAACTTGGCAGATTGAGCATTTCATTGATTTTCACTCTCCTAGGCTCCTTCCAAA--ATTATCATTAGTAAATAGAAAATTCTGAAACCTACAAAGAAAAATACAGCAAAAGAACAACGAATCAG--TCAAAGCTTAGGAGGAGAGGCCATAG i cebCap1.NW_016108322v1 C 0 I 154 s aotNan1.NW_018505037v1 2574067 474 + 3417841 TCCCTTGGG-ACTGGAAAGGTGGGATATGGGGAGCCACCTCCTGCCTGGACCAGTTAATGCCCAGAGCCGTTCCCTCGGGTCCTCATCCCTCCTTCCAGGCAGTGGGGCCGTGGGTTTCTAGGGGAATCCAGGCCTTTAGGGAGACTGGGACTCCGACT------TTGATCTTGCAGCTCCCGCATTTTTCCTGCACATTTGCTGATTAGTTTATGTCTGTCAGGGGCCTCAGGGCCAGTGCTAAGCCCCAGGGTCTTAGGGTAGGAAAGATGATTCCCCAGATTTCCTGCAGGC-TTTGAGCATGGTGGAAGGATCAGTGGAGCCTCCGGTGAAACTTGGCAGATTGAGCATTTCATTTATTTTCACTCTCCCAGGATCTTTCCAAA--ATTATCATTAATAAATAGTAAATTCTGAAACCTACAAAGAAAAATGCAGCAAAAGAACGACGAATCAG--TCAAAGCCTAGGAGGAGAGGCCGTAG i aotNan1.NW_018505037v1 C 0 C 0 a score=152376.000000 s hg38.chr5_KI270795v1_alt 116192 24 + 131892 GGTGACTGACAGCAGCCCCT-GTGG s panTro5.chr5 178489072 25 + 181907262 GGTGACTGACAGCAACCCCCGGTGG i panTro5.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 96181 24 + 152767 GGTGACTGACAGCAACCCCT-GTGG i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160349871 24 - 163208435 GATGACTGGCAGCAACCCCC-GTGG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3622180 25 - 180051392 GATGACTGACAGCAACCCCCTGTGG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3811266 25 - 181584905 GATGACTGACAGCAACCCCCTGTGG i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3830887 25 + 4899514 GATGACTGACAGCAACCCCCTGTGG i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012001120v1 3555180 25 - 3647740 GATGACTGACAGCAGCCCCCTGTGG i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79689416 25 + 82825804 GATGACCGACAGCAACCCCCTGTGG i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1652738 25 - 1768974 AATGACTGACAGCAGCCCCCTGTGG i manLeu1.NW_012103876v1 C 0 C 0 s colAng1.NW_012117422v1 136173 25 - 815015 GATGACTGACAGCAACCCCCCGTGG i colAng1.NW_012117422v1 C 0 C 0 s calJac3.chr2 140348709 25 - 204313951 AATCACCGACAGCAACACCCTGTGG i calJac3.chr2 C 0 I 4053 s saiBol1.JH378186 18742 24 + 10068113 AATCACCGACAGCAACACCCCGTG- i saiBol1.JH378186 C 0 C 0 s aotNan1.NW_018505037v1 2574541 25 + 3417841 AATCACCGACAGCAGCGCCCTGTGG i aotNan1.NW_018505037v1 C 0 C 0 e cebCap1.NW_016108322v1 75970 154 + 99478 I a score=159533.000000 s hg38.chr5_KI270795v1_alt 116216 24 + 131892 GACTGGAGAGCAGACGGTTTGGTG s panTro5.chr5 178489097 24 + 181907262 GACTGGAGAGCAGACGGTTTGGTG i panTro5.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 96205 24 + 152767 GACTGGAGAGCAGATGGTTTGGTG i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160349895 24 - 163208435 GACTGGAGAGCAGACGGTTTGGTG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3622205 24 - 180051392 GACTGGAGAGCAGACGGTTTGGTG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3811291 24 - 181584905 GACTGGAGAGCAGACGGTTTGGTG i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3830912 24 + 4899514 GACTGGAGAGCAGACGGTTTGGTG i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012001120v1 3555205 24 - 3647740 GACTGGAGAGCAGACGGTTTGGTG i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79689441 24 + 82825804 GACTGGAGAGCAGACGGTTTGGTG i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1652763 24 - 1768974 GACTGGAGAGCAGACGGTTTGGTG i manLeu1.NW_012103876v1 C 0 C 0 s colAng1.NW_012117422v1 136198 24 - 815015 GACTGGAGAGCAGACGGTTCTGTG i colAng1.NW_012117422v1 C 0 C 0 s saiBol1.JH378186 18766 24 + 10068113 GACGTGAGAGCAGATGGTTTGGTG i saiBol1.JH378186 C 0 C 0 s aotNan1.NW_018505037v1 2574566 23 + 3417841 -AACTGAGAGCAGATGGTTTGGTG i aotNan1.NW_018505037v1 C 0 I 84 e cebCap1.NW_016108322v1 75970 154 + 99478 I e calJac3.chr2 140348734 4053 - 204313951 I a score=55662.000000 s hg38.chr5_KI270795v1_alt 116240 11 + 131892 GAAACAGCGCC s panTro5.chr5 178489121 11 + 181907262 GAAACAGCGCC i panTro5.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 96229 11 + 152767 GAAACAGCGCC i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160349919 11 - 163208435 GGAACAGTGCC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3622229 11 - 180051392 GAAACAGCGCC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3811315 11 - 181584905 GAAACAGCGCC i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3830936 11 + 4899514 GAAACAGCGCC i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012001120v1 3555229 11 - 3647740 GAAACAGAGCC i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79689465 11 + 82825804 GAAACAGCGCC i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1652787 11 - 1768974 GAAACAGCGCC i manLeu1.NW_012103876v1 C 0 C 0 s colAng1.NW_012117422v1 136222 11 - 815015 GAAACAGCGCC i colAng1.NW_012117422v1 C 0 C 0 s saiBol1.JH378186 18790 11 + 10068113 AGCACCGTGCT i saiBol1.JH378186 C 0 I 95 e cebCap1.NW_016108322v1 75970 154 + 99478 I e calJac3.chr2 140348734 4053 - 204313951 I e aotNan1.NW_018505037v1 2574589 84 + 3417841 I a score=1296102.000000 s hg38.chr5_KI270795v1_alt 116251 175 + 131892 CAGTTCCACAGAGGGAACTTGAGGAGAAGCAAAGTGACTGAGCCAGCAGAGCCGGGCCCCAGAC-CCCCACCCCAGCCTGTGGGAACTGCAGGTGTGATCTGGGAACACACTGTTCTGTCCCTTC--TATTTTTCTCTTCATATAAGCTCTGGTTCTAGAAACAACTCACCTGCAGCC s panTro5.chr5 178489132 175 + 181907262 CAGTTCCACAGAGGGAACTTGAGGAGAAGCAAAGTGACTGAGCCAGCAGAGCCGGGCCCCAGAC-CCCCACCCCAGCCTGTGGGAGCTGCAGGTGTGATCTGGGAACACACTGTTCTGTCCCTTC--TATTTTTCTCATCATATAAGCTCTGGTTCTAGAAACAACTCACCTGCAGCC i panTro5.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 96240 175 + 152767 CAGTTCCACAGAGGGAACTTGAGGAGAAGCAAAGTGACTGAGCCAGCAGAGCCGGGCCCCAGAC-CCCCACCCCAGCCTGTGGGAGCTGCAGGTGTGATCTGGGAACACACTGTTCTGTCCCTTC--TATTTTTCTCTTCATATAAGCTCTGGTTCTAGAAACAACTCACCTGCAGCC i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160349930 173 - 163208435 CAGTTCCACAGCGGGAACTTGAGGAGAAGCAAAGTGACTGAGCCAGCAGAGCCGGGCCCCAGAC-CCCCACCCCAGCCTGTGGGAGCTGCAGGTGTGATCTGGGAACACACTGTTCTGTCCCTTC--TATTTTTCTCATCATATAAACTC--GTTCTAGAAACAGCTCACCTGCAGCC i nomLeu3.chr2 C 0 I 3247 s rheMac8.chr6 3622240 174 - 180051392 CAGTCCCACAGAGGGAACTTGAGGAGAAGCAAAGGGACTGAGCCAGCAGAGCC-GGCCCCAGAC-CCCCGCCCCAGCCTGGGGGAGCTGCAGGTGTGTTCTGGGAACACACTGTTCTGTCCCTTC--TATTTTTCTCATCGTATAAACTCTGGTTCTAGAAACAACTGACCTGCAGCC i rheMac8.chr6 C 0 I 3315 s macFas5.chr6 3811326 174 - 181584905 CAGTCCCACAGAGGGAACTTGAGGAGAAGCAAAGGGACTGAGCCAGCAGAGCC-GGCCCCAGAC-CCCCGCCCCAGCCTGGGGGAGCTGCAGGTGTGTTCTGGGAACACACTGTTCTGTCCCTTC--TATTTTTCTCATCATATAAACTCTGGTTCTAGAAACAACTGACCTGCAGCC i macFas5.chr6 C 0 I 3266 s macNem1.NW_012020287v1 3830947 174 + 4899514 CAGTCCCACAGAGGGAACTTGAGGAGAAGCAAAGGGACTGAGCCAGCAGAGCC-GGCCCCAGAC-CCCCGCCCCAGCCTGGGGGAGCTGCAGGTGTGTTCTGGGAACACACTGTTCTGTCCCTTC--TATTTTTCTCATCATATAAACTCTGGTTCTAGAAACAACTGACCTGCAGCC i macNem1.NW_012020287v1 C 0 I 3360 s cerAty1.NW_012001120v1 3555240 174 - 3647740 CAGTCCCACAGAGGGAACTTGAGGAGAAGCAAAGGGACTGAGCCAGCAGAGCC-GGCCCCAGAC-CCCCGCCCCAGCCTGGGGGAGCTGCAGGTGTGTTCTGGGAACACACTGTTCTGTCTCTCC--TATTTTTCTCATCATATAAACTCTGGTTCTAGAAACAACTGACCTGCAGCC i cerAty1.NW_012001120v1 C 0 I 3358 s chlSab2.chr23 79689476 166 + 82825804 CAGTC--------GGAACTTGAGGAGAAGCAAAGGGACTGAGCCAGCAGAGCC-GGCCCCAGAC-CCCCGCCCCGGCCTGGGGGAGCTGCAGGTGTGTTCTGGGAACACACTGTTCTGTCCCTTC--TATTTTTCTCATCATATAAACTCTGGTTCTAGAAACAACTGACCTGCAGCC i chlSab2.chr23 C 0 I 3332 s manLeu1.NW_012103876v1 1652798 166 - 1768974 CAGTC--------GGAACTTGAGGAGAAGCAAAGGGACTGAGCCAGCAGAGCC-GGCCCCAGAC-CCCCGCCCCAGCCTGGGGGAGCTGCAGGTGTGTTCTGGGAACACACTGTTCTGTCCCTTC--TATTTTTCTCATCATATAAACTCTGGTTCTAGAAACAACTGACCTGCAGCC i manLeu1.NW_012103876v1 C 0 I 3382 s colAng1.NW_012117422v1 136233 173 - 815015 CAGTCCCACAGAGGGAACTTGAGGAGAAGCAAAGGGACTGAGCCAGCAGAGCC-GGCCCCAGAC-CCCCACCCCAGCCTGGGGGAGCTGCAGGCGTGTT-TGGGAACACACTGTTCTGTCTTTTC--TATTTTTCTCATCATATAAACTCTGGTTCTAGAAACAACTCACCTGCAGCC i colAng1.NW_012117422v1 C 0 I 3364 s saiBol1.JH378186 18896 176 + 10068113 CAGTCCCACAGAGGGAACTTGAGGAGACGCAAAGTGACAGAACCAACAGCGCTGGGCCCTGGACACCCCGCCCCAGCCTGTGGGAGCTGCAGGTGTGTTCTGGGAACATACTGCTCTAACCCTTC--TTTTTTTCTCATTAAATAAACTCTGGTTCTAGAAACAACTTGCCTGCAGCC i saiBol1.JH378186 I 95 I 2106 s cebCap1.NW_016108322v1 76124 177 + 99478 CAGTCCCACAGAGGGAACTTGAGGAGAAGCAAAGTGACTGAACCAGCAGAGCCGGGCCCCGGAC-CCCCACCCCAGCCTGTGGGAGCTGCAGGTGTGTTCTGGGAACACACTGCTCTATCCCTTCTTTTTTTTTCTCATTAAATAAACTCTGGTTCTAGAAACAACTTGCCTGCAGCC i cebCap1.NW_016108322v1 I 154 I 4707 s aotNan1.NW_018505037v1 2574673 175 + 3417841 CAGTCCCGCAGAGGGAACTTGAGGAGAAGCAAAGTGACTGAGCCAGCAGAGCCAGGCCCCGGAC-CCCCACCCCAGCCTGTGGGAGCTGCAGTTGTGTTCTGGGAACACACTTCTCTATCCCTTC--TTTTTTTCTCATTAAATAAACTCTGGTTCTAGAAACAACTTGCCTGCAGCC i aotNan1.NW_018505037v1 I 84 I 3821 e calJac3.chr2 140348734 4053 - 204313951 I a score=8346.000000 s hg38.chr5_KI270795v1_alt 116426 33 + 131892 gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg s panTro5.chr5 178489307 33 + 181907262 AGCtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg i panTro5.chr5 C 0 I 36 s gorGor5.CYUI01000356v1 96415 33 + 152767 AGCtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg i gorGor5.CYUI01000356v1 C 0 C 0 e cebCap1.NW_016108322v1 76301 4707 + 99478 I e saiBol1.JH378186 19072 2106 + 10068113 I e nomLeu3.chr2 160350103 3247 - 163208435 I e calJac3.chr2 140348734 4053 - 204313951 I e cerAty1.NW_012001120v1 3555414 3358 - 3647740 I e macNem1.NW_012020287v1 3831121 3360 + 4899514 I e rheMac8.chr6 3622414 3315 - 180051392 I e macFas5.chr6 3811500 3266 - 181584905 I e aotNan1.NW_018505037v1 2574848 3821 + 3417841 I e colAng1.NW_012117422v1 136406 3364 - 815015 I e manLeu1.NW_012103876v1 1652964 3382 - 1768974 I e chlSab2.chr23 79689642 3332 + 82825804 I a score=525.000000 s hg38.chr5_KI270795v1_alt 116459 10 + 131892 t-gtgtgtgtg s gorGor5.CYUI01000356v1 96448 11 + 152767 tggtgtgtgtg i gorGor5.CYUI01000356v1 C 0 I 64 e cebCap1.NW_016108322v1 76301 4707 + 99478 I e saiBol1.JH378186 19072 2106 + 10068113 I e nomLeu3.chr2 160350103 3247 - 163208435 I e calJac3.chr2 140348734 4053 - 204313951 I e cerAty1.NW_012001120v1 3555414 3358 - 3647740 I e macNem1.NW_012020287v1 3831121 3360 + 4899514 I e rheMac8.chr6 3622414 3315 - 180051392 I e macFas5.chr6 3811500 3266 - 181584905 I e aotNan1.NW_018505037v1 2574848 3821 + 3417841 I e colAng1.NW_012117422v1 136406 3364 - 815015 I e manLeu1.NW_012103876v1 1652964 3382 - 1768974 I e chlSab2.chr23 79689642 3332 + 82825804 I e panTro5.chr5 178489340 36 + 181907262 I a score=0.000000 s hg38.chr5_KI270795v1_alt 116469 262 + 131892 AAAGAGACAGAGCACGTGGGAGCTCATTTCTCCCTGGgtgtgtgtgtgtgtgtgtgtgtgtgAAAGAGACAGAGCACGTGGGAGCTCATTTCTCCCTGGgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgAAAGACAGAGACACAGCACGTGGGAGCTCATTTCTCCCTGGgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgAAAGACAGAGACAGAGCACGTGGGAGCTCATTTCTCCCTGGgtgtg e cebCap1.NW_016108322v1 76301 4707 + 99478 I e saiBol1.JH378186 19072 2106 + 10068113 I e nomLeu3.chr2 160350103 3247 - 163208435 I e calJac3.chr2 140348734 4053 - 204313951 I e cerAty1.NW_012001120v1 3555414 3358 - 3647740 I e macNem1.NW_012020287v1 3831121 3360 + 4899514 I e rheMac8.chr6 3622414 3315 - 180051392 I e macFas5.chr6 3811500 3266 - 181584905 I e aotNan1.NW_018505037v1 2574848 3821 + 3417841 I e colAng1.NW_012117422v1 136406 3364 - 815015 I e manLeu1.NW_012103876v1 1652964 3382 - 1768974 I e chlSab2.chr23 79689642 3332 + 82825804 I e gorGor5.CYUI01000356v1 96459 64 + 152767 I e panTro5.chr5 178489340 36 + 181907262 I a score=4827.000000 s hg38.chr5_KI270795v1_alt 116731 69 + 131892 tgtgtgtgtgtgtgtgtgtgtgtgtgtgAAAGACAGAGACACAGAGCACGTGGGAGCTCATTTCTCCCt s saiBol1.JH378186 21178 69 + 10068113 TGTGCGTGTGCATGTGCATGTGAGAGAGAGAGACAGAGACACAGGGCACATGGGGGCTCATTTCTCCCT i saiBol1.JH378186 I 2106 T 69 e cebCap1.NW_016108322v1 76301 4707 + 99478 I e nomLeu3.chr2 160350103 3247 - 163208435 I e calJac3.chr2 140348734 4053 - 204313951 I e cerAty1.NW_012001120v1 3555414 3358 - 3647740 I e macNem1.NW_012020287v1 3831121 3360 + 4899514 I e rheMac8.chr6 3622414 3315 - 180051392 I e macFas5.chr6 3811500 3266 - 181584905 I e aotNan1.NW_018505037v1 2574848 3821 + 3417841 I e colAng1.NW_012117422v1 136406 3364 - 815015 I e manLeu1.NW_012103876v1 1652964 3382 - 1768974 I e chlSab2.chr23 79689642 3332 + 82825804 I e gorGor5.CYUI01000356v1 96459 64 + 152767 I e panTro5.chr5 178489340 36 + 181907262 I a score=0.000000 s hg38.chr5_KI270795v1_alt 116800 127 + 131892 gggtgtgtgtgtgtgtgtgtgtgtgAAAGACACAGAGCACGTGGGAGCCCATTTCTCCCTGGgtgtgtgtgtgtgtgtgtgtgtgtgAAAGAGACACAGAGCACGTGGGAGCCCATTTCTCCCTGGg e cebCap1.NW_016108322v1 76301 4707 + 99478 I e saiBol1.JH378186 21247 69 + 10068113 T e nomLeu3.chr2 160350103 3247 - 163208435 I e calJac3.chr2 140348734 4053 - 204313951 I e cerAty1.NW_012001120v1 3555414 3358 - 3647740 I e macNem1.NW_012020287v1 3831121 3360 + 4899514 I e rheMac8.chr6 3622414 3315 - 180051392 I e macFas5.chr6 3811500 3266 - 181584905 I e aotNan1.NW_018505037v1 2574848 3821 + 3417841 I e colAng1.NW_012117422v1 136406 3364 - 815015 I e manLeu1.NW_012103876v1 1652964 3382 - 1768974 I e chlSab2.chr23 79689642 3332 + 82825804 I e gorGor5.CYUI01000356v1 96459 64 + 152767 I e panTro5.chr5 178489340 36 + 181907262 I a score=4905.000000 s hg38.chr5_KI270795v1_alt 116927 71 + 131892 tgtgtgtgtgtgtgtgtgtgtgtgtgtgAAAGACAGAGACACAGAGCACGTGGGAGCCCATTTCTCCCTGG s saiBol1.JH378186 21178 71 + 10068113 TGTGCGTGTGCATGTGCATGTGAGAGAGAGAGACAGAGACACAGGGCACATGGGGGCTCATTTCTCCCTGG i saiBol1.JH378186 T 69 T 70 e cebCap1.NW_016108322v1 76301 4707 + 99478 I e nomLeu3.chr2 160350103 3247 - 163208435 I e calJac3.chr2 140348734 4053 - 204313951 I e cerAty1.NW_012001120v1 3555414 3358 - 3647740 I e macNem1.NW_012020287v1 3831121 3360 + 4899514 I e rheMac8.chr6 3622414 3315 - 180051392 I e macFas5.chr6 3811500 3266 - 181584905 I e aotNan1.NW_018505037v1 2574848 3821 + 3417841 I e colAng1.NW_012117422v1 136406 3364 - 815015 I e manLeu1.NW_012103876v1 1652964 3382 - 1768974 I e chlSab2.chr23 79689642 3332 + 82825804 I e gorGor5.CYUI01000356v1 96459 64 + 152767 I e panTro5.chr5 178489340 36 + 181907262 I a score=0.000000 s hg38.chr5_KI270795v1_alt 116998 128 + 131892 gtgtgtgtgtgtgtgtgtgtgtgtgAAAGAGACACAGAGCACGTGGGAGCTCATTTCTCCCtgtgtgtgtgtgtgtgtgtgtgtgAAAGACAGAGACACAGAGCACGTGGGAGCCCATTTCTCCCtgg e cebCap1.NW_016108322v1 76301 4707 + 99478 I e saiBol1.JH378186 21249 70 + 10068113 T e nomLeu3.chr2 160350103 3247 - 163208435 I e calJac3.chr2 140348734 4053 - 204313951 I e cerAty1.NW_012001120v1 3555414 3358 - 3647740 I e macNem1.NW_012020287v1 3831121 3360 + 4899514 I e rheMac8.chr6 3622414 3315 - 180051392 I e macFas5.chr6 3811500 3266 - 181584905 I e aotNan1.NW_018505037v1 2574848 3821 + 3417841 I e colAng1.NW_012117422v1 136406 3364 - 815015 I e manLeu1.NW_012103876v1 1652964 3382 - 1768974 I e chlSab2.chr23 79689642 3332 + 82825804 I e gorGor5.CYUI01000356v1 96459 64 + 152767 I e panTro5.chr5 178489340 36 + 181907262 I a score=4174.000000 s hg38.chr5_KI270795v1_alt 117126 62 + 131892 gtgtgtgtgtgtgtgtgtgtgAGAAAGAGA--------CACAGAGCACGTGGGAGCTCATTTCTCCCTGG s saiBol1.JH378186 21179 70 + 10068113 GTGCGTGTGCATGTGCATGTGAGAGAGAGAGACAGAGACACAGGGCACATGGGGGCTCATTTCTCCCTGG i saiBol1.JH378186 T 70 T 2 e cebCap1.NW_016108322v1 76301 4707 + 99478 I e nomLeu3.chr2 160350103 3247 - 163208435 I e calJac3.chr2 140348734 4053 - 204313951 I e cerAty1.NW_012001120v1 3555414 3358 - 3647740 I e macNem1.NW_012020287v1 3831121 3360 + 4899514 I e rheMac8.chr6 3622414 3315 - 180051392 I e macFas5.chr6 3811500 3266 - 181584905 I e aotNan1.NW_018505037v1 2574848 3821 + 3417841 I e colAng1.NW_012117422v1 136406 3364 - 815015 I e manLeu1.NW_012103876v1 1652964 3382 - 1768974 I e chlSab2.chr23 79689642 3332 + 82825804 I e gorGor5.CYUI01000356v1 96459 64 + 152767 I e panTro5.chr5 178489340 36 + 181907262 I a score=0.000000 s hg38.chr5_KI270795v1_alt 117188 1988 + 131892 gtgtgtgtgtgtgtgtgtgtgtgtgtgtgAAAGACAGAGACACAGAGCACGTGGGAGCCCATTTCTCCCtgggtgtgtgtgtgtgtgtgtgtgAGACACACAGAGCACGTGGGAGCGCATTTCTCCCtgggtgtgtgtgtgtgtgtgtgAGAGAGACAGCACGTGGGAGCGCATTTCTCCCtgtgtgtgtgtgtgtgtgtgtgtgtgtgACACACAGAGCACGTGGGAGCTCATTTCTCCCTGGgtgtgtgtgtgtgtgtgtgtgtgtgAGAGACAGCACGTGGGAGCGCATTTCTCCCTGGgtgtgtgtgtgtgtgtgtgtgtgtgAGACACAGCACGTGGGAGCGCATTTCTCCgtgtgtgtgtgtgtgtgtgtgtgtgACACAGAGCACGTGGGAGCGCATTTCTCCCtgggtgtgtgtgtgtgtgtgtgtgtgACACACAGAGCACGTGGGAGCGCATTTCTCCCTGGgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgAAAGACAGAGACACAGAGCACGTGGGAGCCCATTTCTCCCtgggtgtgtgtgtgtgtgtgtgtgtgacagagcacgtgggagcgcatttctccctgggtgtgtgtgtgtgtgtgtgtgtgACACACAGAGCACGTGGGAGCTTTCTCCCTGGgtgtgtgtgtgtgtgtgtgtgtgtgAGAGAGACACAGAGCACGTGGGAGCGCATTTCTCCCtgggtgtgtgtgtgtgtgtgtgtgtgACACACAGAGCACGTGGGAGCGCATTTCTCCCTGGgtgtgtgtgtgtgtgtgtgtgtgtgACACACAGAGCACGTGGGAGCGCATTTCTCCCTGGgtgtgtgtgtgtgtgtgtgtgtgtgACACACAGAGCACGTGGGAGCTCATTTCTCCCTGGgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgAAACACAGAGCACGTGGGAGCGCATTTCTCCCTGGGGgtgtgtgtgtgtgtgtgtgtgtgagagacacacagagcgcgtgggagcgcatttctccctgggtgtgtatgtgtgtgtgtgtgtgtgtgtgAGAGACACAGAGCACGTGGGAGCGCATTTCTCCCTGGgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgAGAGAGAGAGACACAGAGCGCGTGGGAGCGCATTTCTCCCtgggtgtgtgtgtgtgtgtgtgtgtgacacagagcacgtgggagcgcatttctccctgggtgtgtgtgtgtgtgtgtgtgACACACAGAGCACGTGGGAGCGCATTTCCCCCTGGgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgAGACAGAGCGCGTGGGAGCGCATTTCTCCCtgggtgtgtgtgtgtgtgtgtgtgAGAGAGAGACAGAGCACGTGGGAGCGCATTTCTCCCTGGgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgAAAGACAGAGACACAGAGCACGTGGGAGCCCATTTCTCCCtgggtgtgtgtgtgtgtgtgtgACACACAGAGCACGTGGGAGCGCATTTCTCCCTGGgtgtgtgtgtgtgtgtgtgtgtgtgAGAGACACACAGAGCACGTGGGAGCTCATTTCTCCCTGGgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgAGAGAGCACGTGGGAGTGCATTTCTCCCTGGgtgtgtgtgtgtgtgtgtgtgtgtgACACACAGAGCACGTGGGAGCGCATTTCTCCCTGGGGgtgtgtgtgtgtgtgtgtgtgtgAGACACACAGAGCACGTGGGAGCGCATTTCTCCCTGGgtgtgtgtgtgtgtgtgtgtgtgtgACACACAGAGCACGTGGGAGCGCATTTCTCCCtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgAGAGACACAGAGCACGTGGGAGCGCATTTCTCCCtgggtgtgtgtgtgtgtgtgtgtgtgAGACACAGAGCACGTGGGAGCGCATTTCTC e cebCap1.NW_016108322v1 76301 4707 + 99478 I e saiBol1.JH378186 21249 2 + 10068113 T e nomLeu3.chr2 160350103 3247 - 163208435 I e calJac3.chr2 140348734 4053 - 204313951 I e cerAty1.NW_012001120v1 3555414 3358 - 3647740 I e macNem1.NW_012020287v1 3831121 3360 + 4899514 I e rheMac8.chr6 3622414 3315 - 180051392 I e macFas5.chr6 3811500 3266 - 181584905 I e aotNan1.NW_018505037v1 2574848 3821 + 3417841 I e colAng1.NW_012117422v1 136406 3364 - 815015 I e manLeu1.NW_012103876v1 1652964 3382 - 1768974 I e chlSab2.chr23 79689642 3332 + 82825804 I e gorGor5.CYUI01000356v1 96459 64 + 152767 I e panTro5.chr5 178489340 36 + 181907262 I a score=1344.000000 s hg38.chr5_KI270795v1_alt 119176 18 + 131892 CCTCtgtgtgtgtgtgtg s calJac3.chr2 140352787 18 - 204313951 CCTCTAtgcatgtgtgtg i calJac3.chr2 I 4053 C 0 e cebCap1.NW_016108322v1 76301 4707 + 99478 I e saiBol1.JH378186 21249 2 + 10068113 T e nomLeu3.chr2 160350103 3247 - 163208435 I e cerAty1.NW_012001120v1 3555414 3358 - 3647740 I e macNem1.NW_012020287v1 3831121 3360 + 4899514 I e rheMac8.chr6 3622414 3315 - 180051392 I e macFas5.chr6 3811500 3266 - 181584905 I e aotNan1.NW_018505037v1 2574848 3821 + 3417841 I e colAng1.NW_012117422v1 136406 3364 - 815015 I e manLeu1.NW_012103876v1 1652964 3382 - 1768974 I e chlSab2.chr23 79689642 3332 + 82825804 I e gorGor5.CYUI01000356v1 96459 64 + 152767 I e panTro5.chr5 178489340 36 + 181907262 I a score=1213.000000 s hg38.chr5_KI270795v1_alt 119194 6 + 131892 tgtgtg s macFas5.chr6 3814766 6 - 181584905 tgtgtg i macFas5.chr6 I 3266 C 0 s calJac3.chr2 140352805 6 - 204313951 tgcatg i calJac3.chr2 C 0 C 0 e cebCap1.NW_016108322v1 76301 4707 + 99478 I e saiBol1.JH378186 21249 2 + 10068113 T e nomLeu3.chr2 160350103 3247 - 163208435 I e cerAty1.NW_012001120v1 3555414 3358 - 3647740 I e macNem1.NW_012020287v1 3831121 3360 + 4899514 I e rheMac8.chr6 3622414 3315 - 180051392 I e aotNan1.NW_018505037v1 2574848 3821 + 3417841 I e colAng1.NW_012117422v1 136406 3364 - 815015 I e manLeu1.NW_012103876v1 1652964 3382 - 1768974 I e chlSab2.chr23 79689642 3332 + 82825804 I e gorGor5.CYUI01000356v1 96459 64 + 152767 I e panTro5.chr5 178489340 36 + 181907262 I a score=5463.000000 s hg38.chr5_KI270795v1_alt 119200 22 + 131892 --------tgtgtgtgtgtgtgtgtgtgAC---------------------- s nomLeu3.chr2 160353350 22 - 163208435 --------TGTGTGTGTGTGTgagagagac---------------------- i nomLeu3.chr2 I 3247 I 30 s macFas5.chr6 3814772 22 - 181584905 --------tgtgtgtgtgtgagagagagac---------------------- i macFas5.chr6 C 0 I 10 s calJac3.chr2 140352811 52 - 204313951 tgtgtgtgtgtgtgtgtgtgtgagagagagagagagagagagagagagagag i calJac3.chr2 C 0 C 0 e cebCap1.NW_016108322v1 76301 4707 + 99478 I e saiBol1.JH378186 21249 2 + 10068113 T e cerAty1.NW_012001120v1 3555414 3358 - 3647740 I e macNem1.NW_012020287v1 3831121 3360 + 4899514 I e rheMac8.chr6 3622414 3315 - 180051392 I e aotNan1.NW_018505037v1 2574848 3821 + 3417841 I e colAng1.NW_012117422v1 136406 3364 - 815015 I e manLeu1.NW_012103876v1 1652964 3382 - 1768974 I e chlSab2.chr23 79689642 3332 + 82825804 I e gorGor5.CYUI01000356v1 96459 64 + 152767 I e panTro5.chr5 178489340 36 + 181907262 I a score=173734.000000 s hg38.chr5_KI270795v1_alt 119222 31 + 131892 ACACAGAGCGCGTGGGAGCGCATTTCTCCCC s panTro5.chr5 178489376 31 + 181907262 aCACAGAGCACATGGGAGCTCATTTCTCCCT i panTro5.chr5 I 36 C 0 s gorGor5.CYUI01000356v1 96523 31 + 152767 acacagagCACGTGGGAGCTCATTTCTCCCT i gorGor5.CYUI01000356v1 I 64 C 0 s nomLeu3.chr2 160353402 31 - 163208435 acacagaGCACGTGGGAGCTCATTTCTCCCT i nomLeu3.chr2 I 30 C 0 s rheMac8.chr6 3625729 31 - 180051392 acacagagCATGTGGGAGCTCATTTCTCCCT i rheMac8.chr6 I 3315 C 0 s macFas5.chr6 3814804 31 - 181584905 acacagagCATGTCGGAGCTCATTTCTCCCT i macFas5.chr6 I 10 C 0 s macNem1.NW_012020287v1 3834481 31 + 4899514 acacagagCATGTGGGAGCTCATTTCTCCCT i macNem1.NW_012020287v1 I 3360 C 0 s cerAty1.NW_012001120v1 3558772 31 - 3647740 ACACAGAGCATGTGGGAGCTCATTTCTCCCT i cerAty1.NW_012001120v1 I 3358 C 0 s chlSab2.chr23 79692974 31 + 82825804 acacagagCATGTGGGAGTTCATTTCTCCCT i chlSab2.chr23 I 3332 C 0 s manLeu1.NW_012103876v1 1656346 31 - 1768974 acacagagcaTGTGGGAGCTCATTTCTCCCT i manLeu1.NW_012103876v1 I 3382 C 0 s colAng1.NW_012117422v1 139770 31 - 815015 acacagagCATGTGGGAGCTCATTTCTCCCT i colAng1.NW_012117422v1 I 3364 C 0 s calJac3.chr2 140352863 31 - 204313951 agagagagCACATGGGGGCTCATTTCTCCCT i calJac3.chr2 C 0 C 0 e cebCap1.NW_016108322v1 76301 4707 + 99478 I e saiBol1.JH378186 21249 2 + 10068113 T e aotNan1.NW_018505037v1 2574848 3821 + 3417841 I a score=316769.000000 s hg38.chr5_KI270795v1_alt 119253 51 + 131892 GGCTCCAGATGGC-GGCGAGGAAAAGCGAGATCGCACAGGATCCAGGTTCTT s panTro5.chr5 178489407 52 + 181907262 GGCTCCAAATGGCAGGCGAGGAAAAGCGAGATCACACAGGATCCGGGTTCTT i panTro5.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 96554 52 + 152767 GGCTCCAAATGGCAGGCGAGGAAAAGTGAGATCGCACAGGATCCGGGTTCTT i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160353433 52 - 163208435 GGCTCCAGATGGCAGACGAGGAAAAGCGAGATCACACAGGATCCAGGTTCTC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3625760 52 - 180051392 GGCTCCAGATGGCGGACGAGGACAAGCAAGATCACACAGGATCCAGGTTCTT i rheMac8.chr6 C 0 I 9 s macFas5.chr6 3814835 52 - 181584905 GGCTCCAGATGGCGGACGAGGACAAGCAAGATCACACAGGATCCAGGTTCTT i macFas5.chr6 C 0 I 9 s macNem1.NW_012020287v1 3834512 52 + 4899514 GGCTCCAGATGGCGGACGAGGACAAGCAAGATCACACAGGATCCAGGTTCTT i macNem1.NW_012020287v1 C 0 I 9 s cerAty1.NW_012001120v1 3558803 52 - 3647740 GGCTCCAGATGGCAGACGAGGACGAGCAAGATCACACAGGATCCAGGTTCTT i cerAty1.NW_012001120v1 C 0 I 10 s chlSab2.chr23 79693005 52 + 82825804 GGCACCAGATGGCGGATGAGGACAAGCAAGATCACACAGGATCCAGGTTCTT i chlSab2.chr23 C 0 I 9 s manLeu1.NW_012103876v1 1656377 52 - 1768974 GGCTCCAGATGGCAGACGAGGACAAGCAAGATCACACAGGATCCAGGTTCTT i manLeu1.NW_012103876v1 C 0 I 9 s colAng1.NW_012117422v1 139801 52 - 815015 GGCTCCAGATGGCGGACAAGGACAAGCAAGATCACACAGGATCCAGGTTCTT i colAng1.NW_012117422v1 C 0 I 9 s calJac3.chr2 140352894 52 - 204313951 GGTTCCAGATGGGGGATGAGGACACACAGGGTCACGCAGGATCCAAGTTCTT i calJac3.chr2 C 0 I 9 s saiBol1.JH378186 21247 52 + 10068113 GGTTCCAGATGGGGGATGAGGACACGCAAGATCACGCAGGACCCAAGTTCTC i saiBol1.JH378186 T 2 I 9 e cebCap1.NW_016108322v1 76301 4707 + 99478 I e aotNan1.NW_018505037v1 2574848 3821 + 3417841 I a score=2309306.000000 s hg38.chr5_KI270795v1_alt 119304 325 + 131892 TGAGGCCTGATGCCCATTGTCCCACCCTCAGCCTTGGCCTGTCCCCAGCTTGCTGCTGCCTCAAACTA-CAGGCTTCCAAGCACTTACTGGAG-CCA-TTTTTTCTCACGTAGCCCTCCAACTGTTAGTCAGGG-TTAGCCAGGCTCTGTCCGCCCCCAGCCAATCAGAC-AGTCAGTTTCCCCAGCCAGCGGGGAGTTTCTGGTTTGCCAAGACTCAGAGGCTGGTGGAAGCCAGACTGGGAAGGGGGTGGCTCTCCTGGCTGAGCGGGGGAGAGAGATGGGGCGGGCTGTCTTAGAGGAGGAGGCCAGAGTCTCTGACGAGTAGGGAG- s panTro5.chr5 178489459 326 + 181907262 TGAACCCTAATGCCCATTGTCCCACCCTCAGCCTTGGCCTGTCCCCAGCTTGCTGCTGCCTCAAACTA-CAGGCTTCCAAGCACTTACTGGAA-CCA-TTTTTTCTCACATAGCCCTCCAACTCTTAGTCAGGCCTTAGCCAGGCTCTGTCCGCCCCCAGCCAATCAGAC-AGTCAGTTTCCCCAGCCAGCAGGGAGTTTCTGGTTTGCCAAGACTCAGAGGCTGGTGGAAGCTAGACTGGGAAGGGGGTGGCTCTCCTGGCTGAGCGGGGGAGAGAGATGGGGCAGGCTGTCTTAGAGGAGGAGGCCAGAGTCTCTGACGAGTAGGGAA- i panTro5.chr5 C 0 n 0 s gorGor5.CYUI01000356v1 96606 326 + 152767 TGAGCCCTAATGCCCATTGTCCCACCCTCAGCCTTGGCCTGTCCCCAGCTTGCTGCTGCCTCAAACTA-CAGGCTTCCAAGCACTTACTGGAA-CCA-TTTTTTCTCACATAGCCCTCCAACTCTTAGTCAGGCCTTAGCCGGGCTCTGTCCGCCCCCAGCCAATCAGAC-AGTCAGTTTCCCCAGCCAGCGGGGAGTTTCTGGTTTGCCAAGACTCAGAGGCTGGTGGAAGCCAGACTGGGAAGGGGGTGGCTCTCCTGGCTGAGCGGGGGAGAGAGATGGGGCAGGCTGTCTTAGAGGAGGAGGCCAGAGTCTCTGACGAGTAGGGAG- i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160353485 321 - 163208435 TGAGCCCTAATGCCCATTGTCCCACCCTCAGCCTTGGCCTGTCCCCAGCTTGCTGCTGCCCCAAATTA-CAGGCTTCCAAGCACTTACTGGAA-CCATTTTTTTCTCACACAGCCCTCCAAC--TTAGTCAGGCCTTAGCCAGGCTCTGTCCGCCCCCAGCCAATCAGA-----CAGTTTCCCCAGCCAGCGGGGAGTTTCTGGTTTGCCAAGACTCAGAGGCTGGTGGAAGCCAGACTGGGAAGGGGGTGGCTGTCCTGGCCGAGGAGGGGAGAGAGATGGGGCAGGCTCTCTTAGAGAAGGAGGCCAGAGTGTCTGATGAGTAGGGAG- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3625821 322 - 180051392 TGAGCCCTACTGCCCATCGTCCCACCCTCAGCCTTGGCCTGTCCGCAGCTTACTGCTGCCCCAAACTC-CAGGTTTCCAAGCACTTACTGGAA-CCA-TTTTTTCTCACATAGCCGTCCAACTCTTAGTCAGGCCTTAGCAAGGCTCTGTGCACCCCCAGTCAAT----C-AGTCCGTTTCCCCAGCCAGCGGGGAGTCTCTGGTTTGCCAAGACTCAGAGGCTGGTGGAAGCCAGACTGGGGAGGGGGTGGCTCTCCTGGCTGAGGAGGGGAGAGAGATGGGGCAGGCTCTCTTAGAAGAGGAGGCCAGAGGCTCTGACGGGTAAGGGA- i rheMac8.chr6 I 9 I 1 s macFas5.chr6 3814896 322 - 181584905 TGAGCCCTACTGCCCATCGTCCCACCCTCAGCCTTGGCCTGTCCGCAGCTTACTGCTGCCCCAAACTC-CAGGCTTCCAAGCACTTACTGGAA-CCA-TTTTTTCTCACATAGCCGTCCAACTCTTAGTCAGGCCTTAGCAAGGCTCTGTGCACCCCCAGTCAAT----C-AGTCAGTTTCCCCAGCCAGCGGGGAGTCTCTGGTTTGCCAAGACTCAGAGGCTGGTGGAAGCCAGACTGGGGAGGGGGTGGCTCTCCTGGCTGAGGAGGGGAGAGAGATGGGGCAGGCTCTCTTAGAAGAGGAGGCCAGAGGCTCTGACGGGTAAGGGA- i macFas5.chr6 I 9 I 1 s macNem1.NW_012020287v1 3834573 322 + 4899514 TGAGCCCTACTGCCCATCGTCCCACCCTCAGCCTTGGCCTGTCCGCAGCTTACTGCTGCCCCAAACTC-CAGGCTTCCAAGCACTTACTGGAA-CCA-TTTTTTCTCACATAGCCGTCCAACTCTTAGTCAGGCCTTAGCAAGGCTCTGTGCACCCCCAGTCAAT----C-AGTCAGTTTCCCCAGCCAGCGGGGAGTCTCTGGTTTGCCAAGACTCAGAGGCTGGTGGAAGCCAGACTGGGGAGGGGGTGGCTCTCCTGGCTGAGGAGGGGAGAGAGATGGGGCAGGCTCTCTTAGAAGAGGAGGCCAGAGGCTCTGACGGGTAAGGGA- i macNem1.NW_012020287v1 I 9 I 1 s cerAty1.NW_012001120v1 3558865 326 - 3647740 TGAGCCCTACTGCCCATCGTCCCACCCTCAGCCTTGGCCTGTCCGCAGCTTGCTGCTGCCCCAAACTC-CAGGCTTCCAAGCACTTACTGGAA-CCA-TTTTTTCTCACATAGCCCTCCAACTCTTAGTCAGGCCTTAGCAAGGCTCTGTGCACCTCCAGTCAATCAGAC-AGTCCGTTTCCCCAGCCAGCGGGGAGTCTCTGGTTTGCCAAGACTCAGAGGCTGGTGGAAGCCAGACTGGGGAGGGGGTGGCTCTCCTGGCTGAGGAGGGGAGAGAGATGGGGCAGGCTCTCTTAGAAGAGGAGGCCAGAGACTCTGACGGGTAAGGGA- i cerAty1.NW_012001120v1 I 10 I 1 s chlSab2.chr23 79693066 320 + 82825804 TGAGCCCCACTGCCCATCGTCCCACCCTCAACCTTGGCCTGTCCGCAGCTTGCTGCTGCCCCAAACTC-CAGGCTTCCAAGCACTTACTGGAA-CCA-TTTTTTCTCACATAGCCCTCCAACTCTTAGTCAGGCCTTAGTAAGGCTCTGTGCACCCCCAGTCAG--AGAC-AGTCTGTTTCCCCAGCCAGCGGGGAGTTTCTGGTTTGCCAAGACTCAGAGGCTGGTGGAAGCCAGACTGGGGAGGGGGTGGCTCTCCTGGCTGAGGAGGG--GAGAGATGGGGCAGGCTCTCTTAGAAGAGGAGGCCGGAGACTCTG--GGGTAAGGGA- i chlSab2.chr23 I 9 I 1 s manLeu1.NW_012103876v1 1656438 313 - 1768974 TGAGCCCTACTGCCCATCATCCCACCCTCAGCCTTGGCCTGTCCGCAACTTG-------------CTC-CAGGCTTCCAAGCACTTACTGGAA-CCA-TTTTTTCTCACATAGCCGTCCAACTCTTAGTCAGGCCTTAGCAAGGCTCTGTGCACCCCCAGTCAATCAGAC-AGTCAGTTTCCCCAGCCAGCGGGGAGTCTCTGGTTTGCCAAGACTCAGAGGCTGGTGGAAGCCAGACTGGGGAGGGGGCGGCTCTCCTGGCTGAGGAGGGGAGAGAGATGGGGCAGGCTCTCTTAGAAGAGGAGGCCAGAGGCTCTGACGGGGAAGGGA- i manLeu1.NW_012103876v1 I 9 I 1 s colAng1.NW_012117422v1 139862 327 - 815015 TGAGCCCTACTGCCCATCGTCCCACCCTCAGCCTTGGCCTGTCCGCAGCTTGCTGCTACCCCAAACTTACAGGCTTCCAAGCACTTACCGGAA-CCA-TTTTTTCTCACATAGCCCTCCAACTCTTAGTCAGGCCTTCGCAAGGCTCTGTCCACCCCCAGTCCATCAGAT-AGTCAGTTTCCCCAGCCAGCGGGGAGTTTCTGGTTTGCCAAGATTCAGAGACTGGTGGAAGCCAGACTGGGGAGGGGGTGGCTCTCCTGGCTGAGGAGGGGACAGAGATGGGGCAAGCTCTCTTAGAAGAGGAGGCCAGAGGCTCTGACGGGTAAGGGA- i colAng1.NW_012117422v1 I 9 I 1 s calJac3.chr2 140352955 323 - 204313951 TGAGTCCTAATGCCCATGGTCCCATTCTCAGCCTTGGCCTGTCCCCAGCTTGCTGCTGCCCCAAACTA-CAGGCTTCCCAGCACTTACTGGAA-CCA-TGTTTTCCCACATAGCTCCTCAACTCTTAGCCAGGCCTTAGCCAGGCTCTGTCTGCCCCCAGCCAAT----C-AGTCAGTTTCTCCAGCCAGTGGGGAGTTTCTGGTTTGCCAAGACTCAGTGGCTGATGGAAGCCAGACTGGAAAGGGGGTGGCTCTCCTGGCTGAGGAGGGGAGAGAGATGGGGCAGGATCTCTTAGTGGAGGAGGCCAGAGCCTCTGACAAGTAAAGGAG i calJac3.chr2 I 9 C 0 s saiBol1.JH378186 21308 327 + 10068113 TGAGTCCTAATACCTACGGTCCCATTCTCAGCCTTGGCGTGTCCCCAGCTTGCTGCTGCCCCAAACTA-CAGGCTTCCCAGCACTTACTGGAAGGCA-TTCTTTCTCACAC-GCTCCTCAACTCTTAGCCAGGCCTTAGCCAGGCTATGCCTGCCCCCAGCCAATCAGAC-AGTCAGTTTCCCCAGCCAGTGGGGAGTTTCTGGTTTGCCAAGACTCAGTGGCTGGTGGAAGCCAGACTGGAAAGGGGGTGGCTCTCCTGGTTGAGGAGGGGAGAGAGATGGGGCAGGATCTCTTAGAGGAGGAGGCCAGAGCCTCTGACGAGTAAGGGAG i saiBol1.JH378186 I 9 C 0 s aotNan1.NW_018505037v1 2578669 324 + 3417841 TGAGTCCTAATACCCATGGTCCCATTCTCAGCCTTGGCCTGTCCCCAGCTTGCTGCTGCCCCAAACTG-CAGGTTTCCCAGCACTTACTGGAA-CCA-TTTTTTCTCACATAGCTCCTCAA--CTTGGCCAGGCCTTAGCCAGGCTCTTTCTGTCCCCAGCCAATAAGACGAGTCAGTTTCTCCAGCCAGT--GGAGTTTCTGGTTTGCCAAGACTCAGTGGTTGGTGGAAGCCAGACTGGAAAGGGGGTGGCTCTCCCGTTTGAGGAGGGGAGAGAGATGGGGCAGGATCTATTAGAGGGGGAGGCCAGAGCCTCTGACGAGTAAGGGAG i aotNan1.NW_018505037v1 I 3821 C 0 e cebCap1.NW_016108322v1 76301 4707 + 99478 I a score=3375386.000000 s hg38.chr5_KI270795v1_alt 119629 463 + 131892 CCAGCCGTGCCGGGACTGGGCAGAGCGTGTTCACAGCACAGGTGGATGCAAGTGCAGAGCCCTGAGGGTGAAAGGCAGGGCTGCGGTGGGGCTTAGAGAGGAGAACAAGGGGTGGAGAGAAGTGGGGCAGAGTGG-------CTAGCCGCCCAGTCGGACCAGGCCTCATGGACTCTGGTGGCCACTTCAGATTCTCTTTTGGCTGCAGGTTTTAATCCCAACAGCAGTGCAACCTGGTCACACTTGAGAAACATGGGCAGCTGCCGTGGCAAGCACAAGTTGAAGCGGATGGATGTTAGT--GGGCTTTGCTGTGGtgggagtgggcatgatgacggcatgggctgggcatggTGGGAAGGCTGGAGAGAAGCGGGAAGACCGGGTGTGTGAAGTGACCTCACCTGCCCACAACTCGCTGAGGTCACGGCAGGTGTGTGAGGAGGAATGGAGTATAGGAACTCCCGGGTCT s panTro5.chr5 3531335 463 - 181907262 CCAGCCGTGCCAGGACTGGGCAGAGCGTGTTCACAGCACAGGCGGCTGCAAGTGCAGAGTCCTGAGGGTGAAAGGCAGGGCTGCGGTGGGGCTTAGAGAGGAGAACAAGGGGTGGAGAGAAGTGGGGCAGGGTGG-------CTAGCGGCCCAGTCGGACCAGGCCTCATGGACTCTGGTGGCCACTTCAGATTCTATTTTGGCTGCAGGTTGTAATCCCAACAGCAGTGCAACCTGGTCGCACTTGAGAAACATGGGCAGCTGCCGTGGCAAGCACAAGTGGAAGCGGACGGATGTTAGT--GGGCTTTGCTGTGGTGGGAGCGGGCATGATGACGGCATGGGCTGGACATGGTGGGAAGGCTGGAGAGAAGCGGGAAGACTGGGTGCGTGAAGTGACCTCACCTGCCCACAACTCGCTGAGGTCATGGCGGGTGTGTGAGGAGGAATGGAATATAGGAACTCCCGGGTCT i panTro5.chr5 I 96397 C 0 s gorGor5.CYUI01000356v1 96932 463 + 152767 CCAGCCGTGCCAGGAATGGGCAGAGCGTGTTCACAGCACAGGCGGCTGCAAGTGCAGAGCCCTGAGGGTGAAAGGCAGGGCTGCGGTGGGGCTGAGAGAGGAGAACAAGGGGTAGAGAGAAGTGGGGCAGAGTGG-------CTAGCCGCCCAGTCGGACCAGGCCTCATGGACTCTGGTGGCCACTTCAGATTCTATTTTGGCTGCAGGTTTTAATCCCAACAGCAGTGCAACCTGGTCACACTTGAGAAACATGGGCAGCTGCCGTGGCAAGCACAAGTTGAAGCGGATGGATGTTAGT--GGGCTTTGCTGTGGtgggagtgggcatgatgacggcatgggctgggcatggTGGGAAGGCTGGAGAGAAGCGGGAAGACTGGGTGCGTGAAGTGACCTCACCTGCCCACAACTCGCTGAGGTCATGGCGGGTGTGTGAGGGGGAATGGAGTATAGGAACTCCCGGGTCT i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160353806 463 - 163208435 CCAGCCGTGCCAGGACTGGGCAGAGTGTCTTCACAGCACAGGCGGCTGCAAGTACAGAGCCCGGAGCGTGAAAGGCAGGGCTGCGGTGGGGCTTAGAGAGGAGAACAAGGGGCGGAGAGAAGTGGGGCAGGGTGG-------CTAGCGGCCTGGTCAGACCAGGCCTCATGGACTGTGGTGACCACTTCAGATTCTA-TTTGGCCGCAGGTTTTAATCCCAACAGCAGTGCGACCTGGTCACACTTGAGAAACATGGGCAGCTGCCGTGGCAAGCACAAGTTGAAGCGGATGGATGTTGGCAGAGGCTTTGCTGTGGTGGG-GtgggcatgacgatggcatgggctgggcatggTGGGAAGGCTGGAGAGAAGTGGGAAGACTGGGTGCGTGAAGTGACCTCACCTGCCCACAACTCGCTGAGGTCACGGCGGGTGCGTGAGGAGGAACGGAGTATAGGAACTCCCGGGTCT i nomLeu3.chr2 C 0 I 1 s rheMac8.chr6 3626144 461 - 180051392 CCAGCCGTGCCAGGACTGGGCAGAGCGTGTTCATAGCACAGGCGGTTGCAAGCGCACAGCCCTGAGGGTGAAAGGCAGAGCTGCGGTGGGGCTTA--GAGGAGAACAAAGGCTGGAGAGAAGTGGGGAAGGGTGG-------CCAGGGGCCCAGTCGGACCAGGCCTCATGGACTCTGGTGGCCACTTCAGATTCTATTTTGGCTGCAGGTTTTAATCCCAACAGCAGTGTGACCTGGTCGCACTTGAGAAACATGGGCAGCTGCCGTGACAAgcacaagttgaagcggatggatgttagg--gggctttgctgtggcgggagtgggcatgatgatggcatgggctgggcatggtgggaaggctagagagaagcgggaagactgggtgcgtgaagtgacctcacctgcccaggactcactgaagtcacagtgggtgcgggaagaggaacgaaatctagggactcccgggtct i rheMac8.chr6 I 1 I 1 s macFas5.chr6 3815219 461 - 181584905 CCAGCCGTGCCAGGACTGGGCAGAGCGTGTTCATAGCACAGGCGGTTGCAAGCGCACAGCCCTGAGGGTGAAAGGCAGAGCTGCGGTGGGGCTTA--GAGGAGAACAAAGGCTGGAGAGAAGTGGGGAAGGGTGG-------CCAGGGGCCCAGTCGGACCAGGCCTCATGGACTCTGGTGGCCACTTCAGATTCTATTTTGGCTGCAGGTTTTAATCCCAACAGCAGTGTGACCTGGTCGCACTTGAGAAACATGGGCAGCTGCCGTGACAAgcacaagttgaagcggatggatgttagg--gggctttgctgtggcgggagtgggcatgatgatggcatgggctgggcatggtgggaaggctagagagaagcgggaagactgggtgcgtgaagtgacctcacctgcccaggactcactgaagtcacggcgggtgcgtgaagaggaacgaaatctagggactcccgggtct i macFas5.chr6 I 1 I 1 s macNem1.NW_012020287v1 3834896 461 + 4899514 CCAGCCGTGCCAGGACTGGGCAGAGTGTGTTCATAGCACAGGCGGTTGCAAGCGCACAGCCCTGAGGGTGAAAGGCAGAGCTGCGGTGGGGCTTA--GAGGAGAACAAAGGCTGGAGAGAAGTGGGGAAGGGTGG-------CCAGGGGCCCAGTCGGACTAGGCCTCATGGACTCTGGTGGCCACTTCAGATTCTATTTTGGCTGCAGGTTTTAATCCCAACAGCAGTGTGACCTGGTCGCACTTGAGAAACATGGGCAGCTGCCGTGACAAgcacaagttgaagcggatggatgttagg--gggctttgctgtggcgggagtgggcatgatgatggcatgggctgggcatggtgggaaggctagagagaagcgggaagactgggtgcgtgaagtgacctcacctgcccaggactcactgaagtcacggcgggtgcgtgaagaggaacgaaatctagggactcccgggtct i macNem1.NW_012020287v1 I 1 I 1 s cerAty1.NW_012001120v1 3559192 461 - 3647740 CCAGCCGTGCCAGGACTGGGCAGAGCGTGTTCATAGCACAGGTGGTTGCAAGCGCAGAGCCCTGAGGGTGAAAGGCAGAGCTGCGGTGGGGCTTA--GAGGAGAAAAAAGGCTGGAGAGAAGTGGGGAAGGGTGG-------CCAGGGGCCCAGTCGGACCAGGCCTCATGGACTCTGGTGGCCACTTCAGATTCTATTTTGGCTGCAGGTTTTAATCCCAACAGCAGTGTGACCTGGTCGCACTTGAGAAACATGGGCAGCTGCCGTGACAAgcacaagttgaagcggatggatgttagg--gggctttgctgtggcaggagtgggcatgatgatggcatgggctgggcatggtgggaaggctagagagaagcaggaagactgggtgcgtgaagtgacctcacctgcccaggactcactgaagtcacggcgggtgtgtgaagaggaacgaaatctagggactcccgggtct i cerAty1.NW_012001120v1 I 1 I 1 s chlSab2.chr23 79693387 461 + 82825804 CCAGCCGTGCCAGGACTGGGCAGAGCGTGTTCATAGCACAGGTGGTTGCAAGCGCAGAGCCCTGAGGGTGAAAGGCAGAGCTGCGGTGGGGCTTA--GAGGAGAACAAAGGGTGGAGAGAAGTGGGGAAGGGTGG-------CCAGGGGCCCAGTCAGACCAGGCCTCATGGACTCTGGTGGCCACTTCAGATTCTATTTTGGCTGCAGGTTTTAATCCCAACAGCAGTGTGACCTGGTCGCACTTGAGAAACATGGGCAGCTGCCGTGACAAGCACACGTTGAAGCGGATGGATGTTAGG--GGGCTTTGCTGTGGCGGGAGTGAGCATGATGATGGCATGGGCTGGGCATGGTGGGAAGGCTAGAGAGAAGCGGGAAGACTGGGTGCGTGAAGTGACCTCACCTGCCCAGGACTCACTGAAGTCACGGCGGGTGCGTGAAGAGGAACGAAATCTAGGGACTCCCGGGTCT i chlSab2.chr23 I 1 I 152 s manLeu1.NW_012103876v1 1656752 461 - 1768974 CCAGCCGTGCCAGGACTGGGCAGAGCGTGTTCTTAGCACAGGCGGTTGCAAGCGCAGAGCCCTGAGGGTGAAAGGCAGAGCTGCGGTGGGGCTTA--GAGGAGAACGAAGGCTGGAGAGAAGTGGGGAAGGGTGG-------CCAGGGGCCCAGTCGCACCAGGCCTCATGGACTCTGGTGGCCACTTCAGATTCTATTTCGGCTGCAGGTTTTAATCCCAACAGCAGTGTGACCTGGTCGCACTTGAGAAACATGGGCAGCTGCCGTGACAAGCACAAGTTGAAGCGGATGGATGTTAGG--GGGCTTTGCTGTGGCAGGAGtgggcatgatgatggcatgggctgggcatggTGGGAAGGCTAGAGAGAAGCGGGAAGAGTGGGTGCGTGAAGTGACCTCACCTGCCCAGGACTCACTGAAGTCACGGCGGGTGTGTGAAGAGGAACGAAATCTAGGGTCTCCCGGGTCT i manLeu1.NW_012103876v1 I 1 I 23 s colAng1.NW_012117422v1 140190 458 - 815015 CCAGCCGTGCCAGGACTGGGCAGAGCGTGTTCTTAGCACAGGCGGTTGCAAGCGCAGAGCCCTGAGGGTGAAAGGCAGAGCTGCGGTGGGGCTTA-----AAGAACAAAGGGTGCAGAGAATTGGGGAAGGGTGG-------CCAGGGGCCCAGTCGGACCAGGCCTCATGGACTCTGGTGGCCACTTCAGATTCTATTTTGGCTGCAGGTTTTAATCCCAACAGCAGTGTGACCTGGTCGCACTTGAGAAACATGGGCAGCTGCTGTGACAAgcacaagttgaagtggatggatgttagg--gggctttgctgtggtgggagtgggcatgatgatggcatgggctgggcatggtgggaaggctagagagaagcaggaagtctgggtgtgtgaagtgacctcacttgtccaggactcactgaagtcatggcgggtgcgtgaagaggaacgaaatctagggactcccgggtct i colAng1.NW_012117422v1 I 1 I 1 s calJac3.chr2 140353278 468 - 204313951 CCCGCTGTGAAAGGACCGGGCAGAGCATGTTCATAGCACAGGTGGCTGCA-GTGCAGAGCCCTGAGAGTGAAAGGCGGCTCCTCGGTGGGGCTTAGAGAAGAGAACCAGGGATAGAGAGAAGTGGGGCAGGGTGGGGCTCGACCAGGGGCCTGGCCAGGCCAGGCCTCATGGGCTCTGGTGGCCACTTCAGATTCTAGTTCGGCTGCAGGTTTTAATCCCAAGAGTAGTGTGACCTGGTCATACTTGAGAAACATGGGCAGCTGCCATGGCAAGCACAAGTTGAAGCAAATGGACGTTAGG--GGGCTTTGTTGTGGTGGGAGTGGGCATAATGATGGCATGGGCTGGGCATGGTGGGAAGGCTGGAGAGAAGTGGGAAGACTGGGTGTGTGACATGACCTCACCTGCCCTGGACTTGCTGAGGTCAT-GTGGGTACATGAGATGGAAAGGAGTCTAGGGACTCCCAGGTCT i calJac3.chr2 C 0 I 1 s saiBol1.JH378186 21635 469 + 10068113 CCCGCTGTGAAAGGACCGGGCAGAGCGTGTTCGTAGCACAGGCGGCTGCAGGTGCAGAGCCCCGAGAGTGAAAGGCGGCCCCTCAGTGGGGCTTAGAGAGGAGAACCAGGGGTGGAGAGAAGTGGGGCAGGGTGGGGCTGGACCAGAGGCCCGGTCAGGCCAGGCCTCATGGGCTCTGGTGGCCACTTCAGATTCCAGTTCGGCTGCAGGTTTTAATCCCAAGAGCAGTGTAACCTGGTCATACTTGAGAAACGTGGGCAGCTGCCGTGGCAAGTTCGAGTTGAAGCAGATGGATGTTAGG--GGGCTTTGTTGTGGCAGGAGTGGGCATGATGATGGCATGGGCTGGGCATGGTGGGAAGGCTGGAGAGAAGTGGGAAGACTGGGTGTGTGACGTGACCTCACCTGCCCTGGACTTGCTGAGGTCAT-GCAGGTATGTGAGGAGGAAGGGAGTCTAGGGACTCCCAGGTCT i saiBol1.JH378186 C 0 I 1 s aotNan1.NW_018505037v1 2578993 454 + 3417841 CCCGCTGTGAAAGGACCGGGCAGAGCGTGTTCATAGCACGGGCAGCTGCAAGTGCAGAGCCCTGAGAGTGAAAGGCGACCCCTCGGTGGGGCTTAGAGAGGAGAACCAGGGCTGGAGAGAAGTGGGGCAGGGTGGGGCTCGACCAGGAGCCCGGTCAGGCCAGGACTCATGGGCTCCAGTGGCCACTTCAGATTCTAGTTTGGCTGCAGGTTTTAATCCCAAGAGCAGTGTGACCTGGTCGTACTTGAGAAACGTGGGCAGCTGCTGTGCCGAGCACAAGCTGAAGCAGATGGATGTTAGG--CGGCTTTGTTGTGGCGGGAGtgggcatgatgatggcatgggctgggcatggTGGGAA---------------GGAAGACTGGGTGTGTGACGTGACCTCACCTGCCCTGGACTTGCTGAGGTCAT-GCGGGAGTGTGAGGAGGAAAGGAGTCTGGGGACTCCCAGGTCT i aotNan1.NW_018505037v1 C 0 I 1 e cebCap1.NW_016108322v1 76301 4707 + 99478 I a score=184257.000000 s hg38.chr5_KI270795v1_alt 120092 41 + 131892 TGGCCTGTG-----------------------------------CAGCGGGTAGCGGGGGTGT--------------------CATGGGGACAGCC s panTro5.chr5 3531798 41 - 181907262 TGGCCTGTG-----------------------------------CAGCGGGTAGCGGGGGTGT--------------------CATGGGGACAGCC i panTro5.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 97395 41 + 152767 TGGCCTGTG-----------------------------------CAGCGGGTAGCGGGGGTGT--------------------CATGGGGACAGCC i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160354270 41 - 163208435 TGGCCTGTG-----------------------------------CAGCAGGTAGCGGGGGTGT--------------------CATGAGGACGGCC i nomLeu3.chr2 I 1 C 0 s rheMac8.chr6 3626606 74 - 180051392 tggcctgTGTCTCCCG----------------------GGTCTCCAGCAGGTAGCGGGGATGTCAGTGCCGGCATGGGGTCAGCATGGGGTTGGCC i rheMac8.chr6 I 1 C 0 s macFas5.chr6 3815681 74 - 181584905 tggcctgTGTCTCCCG----------------------GGTCTCCAGCAGGTAGCGGGGATGTCAGTGCAGGCATGGGGTCAGCATGGGGTTGGCC i macFas5.chr6 I 1 C 0 s macNem1.NW_012020287v1 3835358 74 + 4899514 tggcctgTGTCTCCCG----------------------GGTCTCCAGCAGGTAGCGGGGATGTCAGTGCCGGCATGGGGTCAGCATGGGGTTGGCC i macNem1.NW_012020287v1 I 1 C 0 s cerAty1.NW_012001120v1 3559654 96 - 3647740 tggcctgCGTCTCCCGGGTCTCTGGCCTGCGTCTCCCAGGTCTCCAGCAGGTAGCGGGGATGTCAGTGCTGGCATGGGGTCGGCATGGGGTTGGCC i cerAty1.NW_012001120v1 I 1 C 0 s manLeu1.NW_012103876v1 1657236 74 - 1768974 TGGCCTGCGTCTCCCA----------------------GGTCTCCAGCAGGTAGCGGGGATGTCAGTGCCGGCATGGGGTCGGCATGGGGTTGGCC i manLeu1.NW_012103876v1 I 23 C 0 s colAng1.NW_012117422v1 140649 63 - 815015 tggcctgTGTCTCCTG----------------------GGTCTCCAGCAGGTAGTGGGGATGTCAGTGCCG-----------GCATGGGGTTGGCC i colAng1.NW_012117422v1 I 1 C 0 s calJac3.chr2 140353747 49 - 204313951 TGGACTGCT-----------------------------------CAGTGGGTAGC-GGGATGTCCGTGCTGG-----------CATGGGGACAGCC i calJac3.chr2 I 1 C 0 s saiBol1.JH378186 22105 49 + 10068113 TGGACTGCT-----------------------------------CAGTGGGTAGC-GGGATGTCAGTGCTGG-----------CATGGGGACAGCT i saiBol1.JH378186 I 1 C 0 s aotNan1.NW_018505037v1 2579448 49 + 3417841 TGGACTGCT-----------------------------------CAGTGGGTAGC-GGGATGTCAGTGCCGG-----------CATGGGGACAGCT i aotNan1.NW_018505037v1 I 1 C 0 e cebCap1.NW_016108322v1 76301 4707 + 99478 I e chlSab2.chr23 79693848 152 + 82825804 I a score=209558.000000 s hg38.chr5_KI270795v1_alt 120133 48 + 131892 GCGGATAATGAGGGAGGGGCTCGGTGGACCCCTTGCTAGGTGGGGCC-A s panTro5.chr5 3531839 48 - 181907262 GCGGATAACGAGGGAGGGGCTCGGTGGACCCCTTGCTGGGTGGGGCC-A i panTro5.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 97436 48 + 152767 GCGGGTAACGAGGGAGGTGCTCGGTGGACCCCTTGCTAGGTGGGGCC-A i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160354311 48 - 163208435 GCGGATAACGAGGGAGGGGCTCGGTGGACCCCTTGTTAGGTGGGGCC-A i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3626680 49 - 180051392 GCGGATAACGCGGGAGGGGCTTGGTGGACCCCTTGCTAGGTGGGGCCGG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3815755 49 - 181584905 GTGGATAACGCGGGAGGGGCTTGGTGGACCCCTTGCTAGGTGGGGCCGG i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3835432 49 + 4899514 GCGGATAACGCGGGAGGGGCTTGGTGGACCCCTTGCTAGGTGGGGCTGG i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012001120v1 3559750 49 - 3647740 ATGGATAACGTGGGAGGGGCTTGGTGGACCCCTTGCTAAGTGGGGCGGG i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79694000 49 + 82825804 GCGGATAACGCGGGAGGGGCTTGGTGGACCCCTTGCTAGGTGGGGCGGG i chlSab2.chr23 I 152 C 0 s manLeu1.NW_012103876v1 1657310 49 - 1768974 GTGGATAACGTGGGAGGGGCTTGGTGGACCCCTTGCTAGGTGGGGCGGG i manLeu1.NW_012103876v1 C 0 C 0 s colAng1.NW_012117422v1 140712 49 - 815015 GCGGATAACGCGGGAGGGGCTTGGTGGACCCCTTGCTAGGTGGGGGCGG i colAng1.NW_012117422v1 C 0 C 0 s calJac3.chr2 140353796 23 - 204313951 GAGGAGAACGTGGGAGGGACCAG-------------------------- i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 22154 20 + 10068113 ---GAGAACGTGGGAGGGGCCAG-------------------------- i saiBol1.JH378186 C 0 C 0 s aotNan1.NW_018505037v1 2579497 23 + 3417841 GAGGAGGATGCGGGAGGGGCCGG-------------------------- i aotNan1.NW_018505037v1 C 0 C 0 e cebCap1.NW_016108322v1 76301 4707 + 99478 I a score=1026486.000000 s hg38.chr5_KI270795v1_alt 120181 131 + 131892 GGCTCTGGCCCTCTTGTGCATCGCTTTTTGTACATCACGGTGTGGGCAGTGCTGTCCTGGGGCAATGTGGATCCATTATTCACTGCAGCACGGCACtactgttatcttcttatt----tatttgtttagttattg s panTro5.chr5 3531887 131 - 181907262 GGCTCTGGCCCTCTTGTGCATCGCTTTTTGTACATCATGGTGTGGGCAGTGCTGTCCTGGGGCAATGTGGATCCATTATTCACTGCAGCACGGCACTACTGTTACCTtcttatt----tatttgtttagttattg i panTro5.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 97484 131 + 152767 GGCTCTGGCCCTCTTATGCATCGCTTTTTGTACATCACGGTGTGGGCAGTGCTGTCCTGGGGCAATGTGGATCCATTATTCACTGCAGCACGGCACtactgttatcttcttatt----tatttgtttagttattg i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160354359 131 - 163208435 GGCTCTGGCCCTCCTGTGCATCGCTTTTTGTACATCACGGTGTGGGCAGTGCCGTCCTGGGGCAATGTGGATCCATTATTCAGTGCAGCGCAGCACtactgttatcttcttgtt----tatttgcttagttattg i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3626729 131 - 180051392 GGCTCTGGCCCTCTTGTGCGTCGCTTTTTGTACATCACGGTGTGGGCAGTGCTGTCCTGGGGCAATGTGGATCCGTTATTcattacagcacggcaccattgctattttcttgtt----tatttgcttagttattg i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3815804 131 - 181584905 GGCTCTGGCCCTCTTGTGCGTCGCTTTTTGTACATCACGGTGTGGGCGGTACTGTCCTGGGGCAATGTGGATCCGTTATTCATTACAGCACGGCACCATTGCTATTTTCTTGTT----TATTTGCTTAGTTATTG i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3835481 131 + 4899514 GGCTCTGGCCCTCTTGTGCGTCGCTTTTTGTACATCACGGTGTGGGTGGTACTGTCCTGGGGCAATGTGGATCCGTTATTCATTACAGCACGGCACCATTGCTATTTTCTTGTT----TATTTGCTTAGTTATTG i macNem1.NW_012020287v1 C 0 I 97 s cerAty1.NW_012001120v1 3559799 131 - 3647740 GGCTCTGGCCCTCCTGTGCATCGCTTTTTGTACATCACGGTGTGGGCGGTGCTGTCCTGGGGCAATGTGGATCCGTTATTcattacagcacggcaccattgctattttcttgtt----tatttgcttagttattg i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79694049 131 + 82825804 GGCTCTGGCCCTCCTGTGCATCCCTTTTTGTACATCACGGTGTGGGCGGTGCTGTTCTGGGGCAATGTGGATCCGTTATTCATTACAGCACGGCGCCATTGCTATTTTCTTGTT----TATTTGCTTAGTTATTG i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1657359 131 - 1768974 GGCTCTGGCCCTCCTGTGCATCGCTTTTTGTACATCACGGTGTGGGCGGTGCTGTCCTGGGGCAATGTGGATCCGTTATTCATTACAGCACGGCACCATTGCtattttcttgtt----tatttgcttaattattg i manLeu1.NW_012103876v1 C 0 C 0 s colAng1.NW_012117422v1 140761 131 - 815015 GGCTCTGGCCCCCCTGTGCATCGCTTTTTGTACATCACGGTGTGGGCGGTGCTGTCCTGGGGCAGTGTGGATCCATTATTCATTACAGCACAGCACtattgttattttcttgtt----tatttgcttagttattg i colAng1.NW_012117422v1 C 0 C 0 s calJac3.chr2 140353819 133 - 204313951 GGCTCTGGCCCTCCTGTGCATCAC-TTTTGTACATCATGGTGTGGGTGGCGCTGTCCTGGGGCGATGTGgctccatt-tttattgcagcacagcattatcgttattttcttgtttgattatttgcttagttattg i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 22174 118 + 10068113 GGCTCTG-------------TCAC-TTTTGTACATCATGGTGTGGGTGGCGCTGTCCTGGGGCGATGTGGATCCATTATTTATTGCAGCACAGCATTATCGTTATT---TTGTTTCATTATTTGCTTAGTTATTG i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016108322v1 81008 130 + 99478 GGCTCTGGCCCTCCTGTGCATCAC--TTTGTACATCACGGTGTGGGTGGCGCTGTCCTGGGGCGATGTGGATCCATTATTTATTGCAGCACAGCATTAGCGTTATT---Ttgtttcactttttgcttagttattg i cebCap1.NW_016108322v1 I 4707 C 0 s aotNan1.NW_018505037v1 2579520 132 + 3417841 GGCTCTGGCCCTCCTGTGCATCCC-TCTTGTACATCATGGTGTGCGTGGCGCTGTCCTGGGGCG-TGTGGATCCAttatttattgcagcacagcattatcgttattgt-ctgcttcattatttgcttagttattg i aotNan1.NW_018505037v1 C 0 C 0 a score=111824.000000 s hg38.chr5_KI270795v1_alt 120312 15 + 131892 tttatcccccaaata s panTro5.chr5 3532018 15 - 181907262 tttatcccccaaata i panTro5.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 97615 15 + 152767 tttatcccccaaata i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160354490 15 - 163208435 tttatcccccaaata i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3626860 15 - 180051392 tatatcccccaaata i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3815935 15 - 181584905 TATATCCCCCAAATA i macFas5.chr6 C 0 C 0 s cerAty1.NW_012001120v1 3559930 15 - 3647740 tatatcccccaaata i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79694180 15 + 82825804 TATATCCCCCAAATA i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1657490 15 - 1768974 tatatcccccaaata i manLeu1.NW_012103876v1 C 0 C 0 s colAng1.NW_012117422v1 140892 15 - 815015 tatatcccccaaata i colAng1.NW_012117422v1 C 0 C 0 s calJac3.chr2 140353952 15 - 204313951 tttatcgcccaaata i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 22292 15 + 10068113 TTTATCCTCCAAACA i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016108322v1 81138 15 + 99478 tttatcccccaaata i cebCap1.NW_016108322v1 C 0 C 0 s aotNan1.NW_018505037v1 2579652 15 + 3417841 tttatcccccaaata i aotNan1.NW_018505037v1 C 0 C 0 e macNem1.NW_012020287v1 3835612 97 + 4899514 I a score=4606781.000000 s hg38.chr5_KI270795v1_alt 120327 579 + 131892 gaatgaatggc--ttgctgaagtatcccttgtgcctagaacaacattggcacagggcaggggctcgatggatatttgctgaatggacggatAAAAggatggatggtggacacatggatggtggat------------------------------------ggatgg---ccgaatgaa---tggatggatggat---------------------------------------------------------ggtggatagatggCTCTGACGGGGGA-ATGGGAAGTTTGATACGTTGCTTCAGAGCCCAGAGAGGTTGG-GGGG--GTGGGGGTAGGAGCAGCGGCCCTGCCATCCTTCCCTCCCTGAACCACCCGACCCTCACAGCCCGTCTCAAATGGGCAAGGGGTTCAGGCATCCAGGGAGACGCACAGCTGCTGCCACACCAGGGCTCAGCAGTCTAGTCTTCTGCCCACCACACCGTCTCTCCTGCCTGCAACACCACTCTCCCTCCCACCCCCAGGGCAC-GGGACCTCCCCTGGGATCTGACCCCTCACCTCCAACGT---------------GGTCCCCAGAGGGCAGGACGGAGTGCCTGGGACATTTTGCATGGCCTCCAAGGAAGCAGCAGCCAGGAGGCGCCACAGACCTGAGGTTTTGCAGAGGCGGGACAGCTGCCAGCACCC s panTro5.chr5 3532033 579 - 181907262 gaatgaatggc--ttgctgaagtatcccttgtgcctagaacaacattggcacagggcaggggctcgatggatatttgctgaatggacggatAAAAggatggatggtggacacatggatggtggat------------------------------------ggatgg---ccgaacgaa---tggatggatggat---------------------------------------------------------ggtggatggatggCTCTGACAGGGGA-ATAGGAAGTTTGATACGTTGCTTCAGAGCCCAGAGAGGCTGG-GGGG--GTGGGTGTAGGAGCAGCGGCCCTGCCATCCTTCCCTCCCTGAGCCACCTGCCCCTCACAGCCCGTCTCAAATGGGCAAGGGGTTCAGGCATCCAGGGAGCCGCACGGCTGCTGCCACACCAGGGCTCGGCAGTCTAGTCTTCCGCCCACCACACCGTCTCTCCTGCCTGCAACACCACTCTCCCTCCCACCCCCAGGGCAC-GGGACCTCCCCTGGGATCTGACCCCTCACCTCCAACGT---------------GGTCCCCAGAGGGCAGGAAGGAGTGCCTGGGACATTTTGCATAGCCTCCAAGGAAGCAGCAGCCAGGAGGCGCCACAGACCTGAGGTTTTGCAGAGGCGGGACAGCCGCCAGCACCC i panTro5.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 97630 603 + 152767 gaatgaatggc--ttgctgaagtatcccttgtgcctagaacaacactggcacagggcaggggctcgatggatatttgctgaatggacggatAAAAggatggatggtggacacatggatggtggatggatgggacacatggatgg------------tggacggatgg---ccgaatgaa---tggatggatggat---------------------------------------------------------ggtggatagatggCTCTGACAGGGGA-ATGGGAAGTTTGATACGTTGCTTCAGAGCCCAGAGAGGTTGG-GGGG--GGTGGGGGAGGAGCAGCGGCCCTGCCATCCTTCCCTCCCTGAACCACCTGACCCTCACAGCCCGTCTCAGATGAGCAAGGGGTTCAGGCATCCAGGGAGACGCACAGCTGCTGCCACACCAGGGCTCAGCAGTCTAGCCTTCTGCCCACCACACCGTCTCTCCTGCCTGCAACACCACTCTCCTTCCCACCCCCAGGGCAC-GGGACCTCCCCTGGGATCTGACCCCTCACCTCCAACGT---------------GGTCACCAGAGGGCAGGAAGGAGTGCCTGGGACATTTTGCATAGCCTCCAAGGAAGCAGCAGCCAGGAGGCGCCACAGACCTGAGGTTTTGCAGAGGCGGGACAGCTGCCAGCACCC i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160354505 596 - 163208435 gaatgaatggcttttgctgaagtatcccttgtgcctagaacaacactggcacagggcaggggctccatggatatttgctgaatggacggatAACAggatggatggtggacacatggatggtggat------------------------------------ggacgg---ccgaatgga---tggacggatggat---------------------------------------------------------ggtggatagatggCTCTGACAGGGGA-ATGGGAAGTTTGATACATTGCTTCAGAGCCCAGAGAGGTTGG-GGGG--GTGGGGGTAGGAGCAGTGGCCCTGCCATCCTTCCCTCCCTGAACCACCTGACCCTCACAGCCCGTCTCAAATGGGCAAGCGGTTCAGGCATCCAGGGAGACGCACAGCCGCTGCCACACCAGGGCTCGGCAGTCTAGTCTTCTGCCCACCACACTGTCTCTCCTGCCTGCAACACCACTCTCCCTCCCACCCCCAGGGTAT-GGGACCTCCCCTGGGATCTGACCCCTCACCTCCAACATGGTCCCCAGAGGGGAGGTCCCCAGAGGGCAGGAAGGAGTGCCTGGGACATTTTGCATAGCCTCCAAGGAAGCAGCAGGCAGGAGGTGCCACAGACCTGAGGTTTTGCAGAGGCGGGACAGCTGCCAGCACCC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3626875 608 - 180051392 gaatgaatggc--ttgctgaagtatcccttgtgcctagaacaacactggcacagggcagcggctcgatagatatttgctgaacggatggatAAAAggatggatggtggacaggtggatggtggat-----ggatgga-------------------tggatggatgg---atggatgga---tggatggatcggttga-------------------------------------------gatggacggtggatggatggaCGGCTCTGACAGGGGACATTGGAAGTTTGACAAGTTGCTTCAGAGCCCAGAGAAGTTGA-GGGGCAGCGGGGCCAGGAGCAGCAGCCCTGCCATCCTTCCCTCCCTGAACCACCTGATTCTCACAGCCCGTCCCAAATGGGTAAGGGGTTCAGGCATCCAGGGAGACGCACAGCCGCTGCCACACCAGGGCTCAACGGTCTAGTCTCCTGCCCAGCGTGCCGTTTCTCCTGCCTACACCACCACTCTCCCTCCCACCCC-AGGGCACAGGGGCCTCCCCTGGGATCTGACCCCTCACCTCCGACAT---------------GGTCTCCAGAGGGCCGGAAGGAGTGCCTGGGACCTTTTGCACAGCCTCCAAGGAAGCAGCAGCCAGGAGGCACTATAGAACTGAGGTTTTGCAGAGGCAGGACAGCTGCCAGCACCC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3815950 612 - 181584905 GAATGAATGgc--ttgctgaagtatcccttgtgcctagaacaacactggcacagggcagcggctcgatagatatttgctgaacggatggatAAAAggatggatggtggacaggtggatggtggat-----ggatggccgaatgg------------tggatggatgg---atggatgga---tggatggatggat--g-------------------------------------------gatggacggtggatggatggatggCTCTGACAGGGGA-ATAGGAAGTTTGACAAGTTGCTTCAGAGCCCAGAGAAGTTGA-GGGGCAGCGGGGCCAGGAGCAGCAGCCCTGCCATCCTTCCCTCCCTGAACCACCTGATTCTCACAGCCCGTCCCAAATGGGTAAGGGGTTCAGGCATCCAGGGAGACGCACAGTCGCTGCCACACCAGGGCTCAACAGTCTAGTCTCCTGCCCAGCGTGCCGTTTCTCCTGCCTACACCACCACTCTCCCTCCCACCCC-AGGGCACAGGGGCCTCCCCTGGGATCTGACCCCTCACCTCCGACAT---------------GGTCTCCAGAGGGCCGGAAGGAGTGCCTGGGACCTTTTGCACAGCCTCCAAGGAAGAAGCAGCCAGGAGGCACCATAGAACTGAGGTTTTGCAGAGGCAGGACAGCTGCCAGCACCC i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3835709 624 + 4899514 GAATGAATGgc--ttgctgaagtatcccttgtgcctagaacaacactggcacagggcagcggctcgatagatatttgctgaacggatggatAAAAggatggatggtggacaggtggatggtggat-----ggatggccgaatggtggatggatggatggatggatgg---atggatgga---tggatggatggat--g-------------------------------------------gatggacggtggatggatggatggCTCTGACAGGGGA-ATAGGAAGTTTGACAAGTTGCTTCAGAGCCCAGAGAAGTTGG-GGGGCAGCGGGGCCAGGAGCAGCAGCCCTGCCATCCTTCCCTCCCTGAACCACCTGATTCTCACAGCCCGTCCCAAATGGGTAAGGGGTTCAGGCATCCAGGGAGACGCACAGTCGCTGCCACACCAGGGCTCAACAGTCTAGTCTCCTGCCCAGCGTGTCGTTTCTCCTGCCTACACCACCACTCTCCCTCCCACCCC-AGGGCACAGGGGCCTCCCCTGGGATCTGACCCCTCACCTCCGACAT---------------GGTCTCCAGAGGGCCGGAAGGAGTGCCTGGGACCTTTTGCACAGCCTCCAAGGAAGAAGCAGCCAGGAGGCACTATAGAACTGAGGTTTTGCAGAGGCAGGACAGCTGCCAGCACCC i macNem1.NW_012020287v1 I 97 C 0 s cerAty1.NW_012001120v1 3559945 614 - 3647740 gaatgaatggc--ttgctgaagtatcccttgtgcctagaacaacactggcacagggcagcagctcgatagatatttgctgaatggatagatAAAAggatggatgatggacaggtggatggtggat-----ggatggccgaatgg------------tggatggatgg----tggatggatggtggatggatggat--g-------------------------------------------gatggatggtggatggatggatgACTCTGACAGGGGA-ATGGGAAGTTTAACAAGTTGCTTCAGAGCCCAGAGAAGTTGG-GGGGGAGCGGGGCTAGGAGCAGCGCCCCTGCCACCCTTCCCTCCCTGAACCACCTGACCCTCACAGCCCGTCCCAAATGGGCAAGGGGTTCAGGCATCCAGGGAGACGCACAGCCGCTGCCACACCAGGGCTCAACAGTCTAGTCTCCTGCCCACCGTGCCGTTTCTCCTGCCTGCACCACCACTCTCCCTCCCACCCC-AGGGCACAGGGGCCTCCCCTGGGATCTGACCCCTCACCTCCGACAT---------------GGTCTCCAGAGGGCCGGAAGGAGTGCCTGGGACCTTTTGCACAGCCTCCAAGGAAGAAGCAGCCAGGAGGCATCATAGAACTGAGGTTTTACAGAGGCAGGACAGCTGCCAGCACCC i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79694195 615 + 82825804 GAATGAATGgc--ttgctgaagtatcgcttgtgcctagaacaacactggcacagggcagtggctcgatagatatttgctgactggatggataaaaggatggatggtggacaggtggatagtggat-----ggatggccgaatgg------------tggatggatggtggatggatggg---tggatggatggat--g-------------------------------------------gatggatggtggatggatggatggctctgacagggga-ataggaagtttgacaagttgcttCAGAGCCCAGAGAAGTTGC-GGGGGAGCGGGGCTAGGAGCAGCAGCCCTGCCATCCTTCCCTCCCTGAACCACCTGATTCTCACAGCCCGTCCCAAATGGGCAAGGGGTTCAGGCATCCAGGGAGACGCACAGTCGCTGCCACATCAGGGCTCAACACTCTAGTCTCCTGCCCAGCGTGCCGTTTCTCCTGCCTACACCACCACTCTCCCTCCCACCCC-AGGGCACAGGGGCCTCCCCTGGGATCTGACCCCTCACCTCCGACAT---------------GGTCTCCAGAGGGCCGGAAGGAGTGCCTGGGACCTTTTGCACAGCCTCCAAGGAAGAAGCAGCCAGGAGGCACCATAGAGCTGAGGTTTTGCAGAGGCAGGACAGCTGCCAGCACCC i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1657505 615 - 1768974 gaatgaatggt--ttgctgaagtatcccttgtgcctagaacaacactggcacagggcagcggctcgatagatatttgctgaacggatggatAAAAggatggatgatggacaggtggatggtggat-----ggatggccgaatgg------------tggatggatggtggatggatggg---tggatggatggat--g-------------------------------------------gatggatggtggatggatggatggCTCTGACAGGGGA-ATAGGAAGTTTGACAAGTTGCTTCAGAGCCCACAGAAGTTGG-GCGAGAGCGGAGCTAGGAGCAGCAGCCCTGCCATCCTTCCCTCCCTGAACCACCTGACCCTCACAGCCCATCCCAAATGGGCAAGGGGTTCAGGCATCCAGGGAGACGCACAGCCGCTGCCACACCAGGGCTCAACGGTCTAGTCTCCTGCCCAGCGTGCCGTTTCTCCTGCCTACACCACCACTCTCCCTCCCACCCC-AGGGCACAGGGGCCTCCCCTGGGATCTGACCCCTCACCTCCGACAT---------------GGTCTCCAGAGGGCCGGAAGGAGTGCCTGGGACCTTTTGCACAGCCTCCAAGGAAGAAGCAGCCAGGAGGCACCATAGAGCTGAGGTTTTGCAGAGGCAGGACAGCTGCCAGCACCC i manLeu1.NW_012103876v1 C 0 C 0 s colAng1.NW_012117422v1 140907 580 - 815015 gaatgaatggc--ttgctgaagtatcccttgtgcctagaacaacactggcacagggcagcggctcgatagatatttgctgaatggatgaatAAAAGGATGGATAGTGGACAGGtggatggtggat-----ggacggctgaatgg------------tggatggatgg---------------tggatggatggat--------------------------------------------------------------------ggCTCTGAC--GGGA-ATGGGAAGTTTGACGAGTTGCTTCAGAGCCCAGAGAAGTTGGTGGGGGGGCGGGGGTAGGAGCAGCAGCCCTGCCATCCTTCCCTCCCTGAACCACCTGACCCTCACAGCCCATCCCAAATGGGCAAGGGGTTCAGGCATCCAGGGAGACGCACAGCCGCTGCCACACCAGGGCTAAACAGTCTAGTCTCCTGCCCACCATGCAGTTTCTCCTGCCTGCAACGCCACTCTCCCTCCCACCCCTAGGACACAGGGGCCTCCTCTGGGATCTGACCCCTCACCTCCGACAT---------------GGTCTCCAGAGGGCAGGAAGGAGTGCCTGGGATCTTTTGCACAGCCTCCAACGAAGAAGCAGCCAGGAGGCACCATAGAACTTAGGTTTTGTAGAGGCAGGACAGCTGCCAGCACCC i colAng1.NW_012117422v1 C 0 C 0 s calJac3.chr2 140353967 597 - 204313951 gaatgaatggc--ttgctgaagtatcccttgtgcctagaacaacactggcatagggcgggggctctatttatatttgcagaatggctggaCAAAAAgatggatg--ggtcaggtggatggtggat-----ggatggacaaatggg-----------tgcatggatgg---atggactaa---tggatggatggat--g-----------------------------------------------gatgatggatggatggatggCTCTGCCAGGGGA-ATGGGAAGTTTGACAAGTTGCTTCAAAGGCCAGAGAAGTCAG-ACAG---------TAGGAGCAGCACTGCTGCCATCCTTCCCTCCCCGAACCACCTGACATTTGCACCCCGTCCCAAATGAGCAA-GGGTTCAGGCATCTGGGGAAACGCACAGCCGCTGCCACACCCGGGCTCAGTAGTCCAGTCTTTGGCCCACCACACCGTTTCTCCTGCCAACAACATCATTCTCTTTCTCACCCCCAGGGCAC-AGGACCTCCCCTGGGATCTGACCCCTCACCTCCAACAT---------------GGTCCCCAGAGGGGAGGAAAGAGTGCCTGGGACCTTTTGCACCGCCTCCAAGGAAGAAGCAGCCAGGAGGCACCACAGACCTAAGGTTTTGCAAAGGAAGGACAGCTGCCAGCACCC i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 22307 565 + 10068113 GAATGAATGgc--tcgctaaagtatctcttgtgcctagaacaacactggcacagggcaggggctcgatttatatttgcagaatggatggatAAAAAgatggatggtggacaggcggatggtggat-----ggatggacaaacggg-----------tgc------------------------------------------------------------------------------------------atggatggatcgatggCTCTGCCAGGGGA-ATGGGAAGTTTGACAAGTTGCTTCAAAGGCCAGAGAAGTCAG-AGGG---------TGGGAGCAGCAGCCCTGCCATCCTTCCCTCCCTGAACCACCTGACACCTGAACCCCGTCCCACACGAGCAAGGGGTTCAGGCATCCGGGGAAACGTACAGCCGCCGCCCCACCGGGGCTCAGTAGCCCAGTCTCTGGCCCACCACACCGTTTCTCCTGCCAACACCACCACTCTCTTTCCCACCCCGAGGGCAC-AGGACCTCCCCTGGGATCTGACCCCTCACCTTTGACAT---------------GGTCCCCAGAGGGGAAGAAAGCGTGCCTGGGACCTTTTGCACAGCCTCCAAGGAAGAAGCAGCCAGGAGGCGCCACAGATCTAAGGTTTTGCAAGGGAAGGACAGCTGCCAGCGCCC i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016108322v1 81153 589 + 99478 gaatgaatggc--ttgctgaagtatcccttgtgcctaaaacaacactggcacagggcaggggctagatttatatttgcagaatggatggatAAAAAgatggatggtggacaggtggatggtggat-----ggatggacaaatggg-----------tgcatggatgg---atggactaa---tggatggatggat--g---------------------------------------------------gtggatgaatggatgCCTCTGCCAGGGGA-ATGGGAAGTTTGACAAGTTGCTTCAAAGGCCAGAGAAGTCAG-AGGG---------TAGGAGCAGTA---CTGCCATCCTTCCCTCCCTGAACCACCTGACACTTGCACCCCATCCCAAATGAGCAAGGGGTTCAGACATCCGGGGAAACGCACAGCCGCCGCCGAACTGGGGCTCAGTAGTCCAGTCTTTGGC---CCACACCGTTTCTCCTGCCAACAACACCACTCTCTTTCCCACCCCCAGGGCAC-AGGACCTCCCCTGGGATCTGACCCCTCACCTCCGACAT---------------GGTCCCCAGAGGGGAGGAAACAGTGCCTGGGACCTTTTGCACAGCCTCCAAGGAAGAAGCAGCCAGGAGGCACCACAGACCCAAGGTTTTGCAAAGG-AGGACAGCTGCCAGCACCC i cebCap1.NW_016108322v1 C 0 I 1426 s aotNan1.NW_018505037v1 2579667 647 + 3417841 gaatgaatggc--ttgctgaagtatcccttgtgcctagaacaacagtggcatagggcaggggctcgatttatatttgcggaatggatggatAAAAAgatggatggtggacaggtggatggtggat-----ggatggacaaatggg-----------tgcatggatgg---atggactaa---tggatggatggat--ggatggactaatggatggatggatggatggatggatggatggtggatggatggtggatggatggatggCTCTGCCAGGGGA-ATGGGAAGTTTGACAAGTTGCTTCAAAGGCCAGAGAAGTCAG-AGGG---------TAGGAGCAGCAGCCCTGCCATCCTTCCCTCCCTGAACCACCTGACACTTGCACCCCATCCCAAATGAGCAAGGCGTTCAGGCATCCGGGGAAATGCACAGCCGCTGCCTCACCAGGGCTCAGTAGTCCTGTCTTTGGCCCACCACACCGTTTCTCCTGCCAACAATACCACTCTCTTTCCCACCCCTAGGGCAC-AGGAGCTCCCCTGGGATCTGACCCCTCGCCTCCAACAT---------------GGTCCCCAGAGAGGAGGAAAGAGTGCCTGGGACCTTTTGCACAGCCTCCAAGGAAGAAGCAGCCAGGAGGCACCACAGACCTAAGGTTTTGCAAAGGAAGGACAGCTGCCAGCACCC i aotNan1.NW_018505037v1 C 0 C 0 a score=3797271.000000 s hg38.chr5_KI270795v1_alt 120906 533 + 131892 AGGGCCCCGCCC-TGGCGACACGGAGGTGCTGC-------GGCCAAGAGGGTTCCCCTTTGGGTTC-ACTGCTGCTGCCCACCACCCGGATCTGGGACGGCAAGGCTGCTGGGGACACTTAGCTTAGCTGGGACAATGTCTCAGGAAGCAGGAAACAGTTGGATCTGCATAGTGGTGGCTGTGGAAAGTCAGCACACAAGGGAAGTCCCCTGCCCATCAGTGTGTAGAAGGAGGTCCTGTGTCCAGTCACGGCTTTCAGGACCAAAGGCTTCCGCAGGGGCCCCAGGCCAGGGCTGCTCTGACCCTCCCATTCCTTTCCCCTCCAACCCCCTCCAGTGTACAAAACGCAGCGCCTGCAGGTGTGCTCAGAAGAGGAACTCCGCAGAGTGGAGCTAAGTCTCCGACATG-------GGAGAGAGGGAGAGGATCCCCTCTAGAAACCTGGCCTGGGCTCACATGATCCTGTCCTGGTATGTCCCAGTGTCCAGCAGGAACTTCTTGGGTCCAAGACAAatctccagcttctggctccctgctgggcactc s panTro5.chr5 3532612 528 - 181907262 AGGGCCCCGCCC-TGGCGACGCGGAGGTGCTGC-------GGCCGAGAGGGTTCCCCTGTGGGTTC-ACTGCTGCTGCCCGCCACCCAGATCTGGGACGGCAAGGCTGCTGGGGACACTTAGCTTAGCTGGGACAATGTCTCAGGAAGCAGGAAACAGTTGGATCTGCATAGTGGTGGCTGTGGAAAGTCAGCACACAAGGGAAGTCCCCTGCCCATCAGTGTGTAGAGGGAGGTCCTGTGTCCAGTCACGGCTTTCAGGACCAAGGGCTTCCGCAGGGGCCCCAGGCCAGGGCTGCTCTGACCCTCCCATTCCTTTCCCCTCCAACCCCCTCCAATGTACAAAACGC-----CTGCAGGTGTGCTCAGAAGAGGAACTCCGCAGAGTGGAGCCAAGTCTCCGACATG-------GGAGAGAGGGAGAGGATCCCCTCTAGAAGCCCGGCCTGGGCTCACAGGATCCTGTCCTGGTATGTCCCAGTGTCCAGCAGGAACTTCTTGGGTCCAAGACAAATCTCCAGCTTCTGGCTCCCTGCTGGGCACTA i panTro5.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 98233 532 + 152767 AGGGCCCCGCCC-TGGCGACATGGAGGTGCTGC-------GGCCAAGAGGGTTCCCCTTTGGGTTC-ACTGCTGCTGCCCGCCACCCGGATCTGGGACGGCAAGGCTGCTGGGGACACTTAGCTTAGCTGGGACAATGTCTCAGGAAGCAGGAAACAGTTGGATCTGCATAGTGGTGGCTGTGGAAAGTCAGCACACAAGGGAAGTCCCCTGCCCATCAGTGTGTAGAAGGAGGTCCTGTGTCCAGTCATGGCTTTCAGGACCAAAGGCTTCC-CAGGGGCCCCAGGCCAGGACTGCTCTGACCCTCCCATTCCTTTCCCCTCCAACCCCCTCCAGTGTACAAAACGCAGTGCCTGCAGGTGTGCTCAGAAGAGGAACTCCGCAGAGTGGAGCTAAGTCTCCGACATG-------GGAGAGAGGGAGAGGATCCCCTCTAGAAACCTGGCCCGGGCTCACATGATCCTGTCCTGGTATGTCCCAGTGTCCAGCAGGAACTTCTTGGGTCCAAGACAAATCTCCAGCTTCTGGCTCCCTGCTGGACACTC i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160355101 532 - 163208435 AGGGCCCCGCCC-TGGCAACATGGAGGTGCTGC-------AGCCAAGAGGGTTCCCCTGTGGGTTC-ACTGCTGCTGCCTGCCACCCGGATCTGGGACGGCAAGGCTGCTGGGGACACTTAGCTTAGCTGGGACAATGTCTCAGGAAGCAGGAAACAGTTGGATCTGAATAGTGGTGGCTGTGGAAAGTCAGCATACAAGGGAAGTCCCCTGCCCATCAGTGTGTAGAAGGAGGTCCTGTGTCCAGTCACGGCTTTCAGGACCAAGGGCTTCCGCAGGGGCCCCAGGCCAGGGCTGCTCTGACCCTCCCATTCCTTTCCTCTCCAGCCCCCTCCAATGTACAAAACGCAGTGCCTGCGGGTGTGCTCAGAAGAAGAATTTCGCAGAGTGGAGCCAAGTCTCCCACATG-------GGAGAGAGGGAGAGGATCCCCTCTAGAAGCCTGGCCT-GGCTCACAGGATCCTGTCCTGGTATGTCCCAGTGTCCAGCAGGAACTTCTTGGGTCCAAGACAAatctccagcttctggctccctgctgggcacta i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3627483 534 - 180051392 AGGGCCCTGCCCAAGGCGATGAGGAGCTGCTGC-------AGCCAAGAGGGTTCCCCTGTGGGTTCAACTGCTGCTGCCCGCCACCCGGATCTGGGATGGCAAGACCGCTGGGGACACTTAGCTTAGCTGGGACAGTGTCTCAGGAAGCGGGAAACAGTTGGATCTGCAGAGTGGTGGCTGTGGAAAGTCAGCACACAAGGGAAGTCCCCTGCCCATCAGTGTTTCGCAGGAGGTCCTGTGTCCAGCCACGGCTTTCAGAACCAAGGGCTTCTGCAGGTGCCCCAGGCCAGGGCTGCTCTGACCCTCCCATTCCTTT-CCCTCCAACCCCCTCCAATGTACAAAACGCGGCGCCTGCAGGTGTGCTCAGAAGAGGAACTCCGCAGAGTGGAGCCAAGTCTCTGACATG-------GGAGAGAGGGAGAGGATCCCCTCTAGATGCCTGGCCTGGGCTCGCATGATCCTGTCCTGGTATGTCACCGTGTCCAGCAGGAACTTCTTGGGTCCAAGACAAATCTCCAGCTTCTGGCTCCCTGTGTGGCACTA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3816562 533 - 181584905 AGGGCCCTGCCCAAGGCGATGAGGAGCTGCTGC-------AGCCAAGAGGGTTCCCCTGTGGGTTC-ACTGCTGCTGCCCGCCACCCGGATCTGGGATGGCAAGACCGCTGGGGACACTTAGCTTAGCTGGGACAGTGTCTCAGGAAGCGGGAAACAGTTGGATCTGCAGAGTGGTGGCTGTGGAAAGTCAGCACACAAGGGAAGTCCCCTGCCCATCAGTGTTTCGCAGGAGGTCCTGTGTCCAGCCACGGCTTTCAGAACCAAGGGCTTCTGCAGGTGCCCCAGGCCAGGGCTGCTCTGACCCTCCCATTCCTTT-CCCTCCAACCCCCTCCAATGTACAAAACGCGGCGCCTGCAGGTGTGCTCAGAAGAGGAACTCCGCAGAGTGGAGCCAAGTCTCTGACATG-------GGAGAGAGGGAGAGGATCCCCTCTAGATGCCTGGCCTGGGCTCGCATGATCCTGTCCTGGTATGTCCCCGTGTCCAGCAGGAACTTCTTGGGTCCAAGACAAATCTCCAGCTTGTGGCTCCCTGCGTGGCACTA i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3836333 540 + 4899514 AGGGCCCTGCCCAAGGTGATGAAGAGCTGCTGC-------AGCCAAGAGGGTTCCCCTGTGGGTTC-ACTGCTGCTGCCCGCCACCCGGATCTGGGATGGCAAGACCGCTGGGGACACTTAGCTTAGCTGGGACAGTGTCTCAGGAAGCGGGAAACAGTTGGATCTGCAGAGTGGTGGCTGTGGAAAGTCAGCACACAAGGGAAGTCCCCTGCCCATCAGTGTTTCGCAGGAGGTCCTGTGTCCAGCCACGGCTTTCAGAACCAAGGGCTTCTGCAGGTGCCCCAGGCCAGGGCTGCTCTGACCCTCCCATTCCTTT-CCCTCCAACCCCCTCCAATGTACAAAACGCGGCGCCTGCAGGTGTGCTCAGAAGAGGAACTCCGCAGAGTGGAGCCAAGTCTCTGACATGGGAGAGAGGAGAGAGGGAGAGGATCCCCTCTAGATGCCTGGCTTGGGCTCGCATGATCCTGTCCTGGTATGTCACCGTGTCCAGCAGGAACTTCTTGGGTCCAAGACAAATCTCCAGCTTCTGGCTCCCTGCGTGGCACTA i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012001120v1 3560559 529 - 3647740 AGGGCCCCGCCCAAGGTGACGAGGAGCTGCTGC-------AGCCAAGAGGGTTCCCCTGTGGGTTC-ACTGCTGCTGCCCACCACCCGGATCTGGGATGGCGAGACCGCTGGGGACACTTAGTTTAGCTGGGACAGTGTCTCAGGAAGCGGGAAACAGTTGGATCTGCAGAGTGGTGGCTGTGGAAAGTCAGCACACAAGGGAAGTC-----CCCATCAGTGTGTCGCAGGAGGTCCTGTGTCCAGCCACGGCTTTCAGAACCAAGGGCTTCTGCAGGTGTCCTAGGCCAGGGCTGCTCTGACCCTCCCATTCCTTTCCCCTCCAACCCCCTCCAATGTACAAAACGCAGCGCCTGCAGGTGTGCTCAGAAGAGGAACTCCGCAGAGTGCAGCCAAGTCTCTGACATG-------GGAGAGAGGGAGAGGACCCCCTCTAGACGCCTGGCCTGGGCTCGCATGATCCTGTCCTGGTATGTCCCCGTGTCCAGCAGAAACTTCTTGGGTCCAAGACAAATCTCCAGCTTCTGGCTCCCTGCGTGGCACTA i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79694810 529 + 82825804 AGGGCCCCGCCCAAGGTGACAAGGAGGTGCCGC-------AGCCAAGAGGGTTCCCCTGTGGGTTC-ACTGCTGCTGCCCGCCACCCGGATCTGGGATGGCAAGACCGCTGGGGACACTTAGCTTAGCTGGGACAGTGTCTCAGGAAGCGGGAAACAGTTGGATCTGCAGAGTGGTGCCTGTGGAAAGTCAGCACACAAGGAAAGTC-----CCCATCAGTGTGTAGCAGGAGGTCCTGTGTCCAGCCACGGCTTTCAGAACCAAGGGCTTCTGCAGGTGTCCTAGGCCAGGGCTGCTCTGACCCTCCCATTCCTTTCCCCTCCAACCCCCTCCAATGTACAAAACACAGCACCTGCAGGTGTGCTCAGAAGAGGAACTCCGCAGAGTGGAGCCAAGTCTCTGACATG-------GGAGAGAGGGAGAGGATCCCCTCTAGAAGCCTGGCCTGGGCTCACATGATCCTGTCCTGGTATGTCCCAGTGTCCAGCAGGAACTTCTTGGGTCCAAGACAAATCTCCAGCTGTTGGCTCCCTGCGTGGCACTA i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1658120 528 - 1768974 AGGGCCCCGCCCAAGGTGACGAGGAGGTGCTGC-------AGCCAAGAGGGTTCCCCTGTAGGTTC-ACTGCTGCTGCCCGCCACCCGGATCTGGGATGGCGAGACCGCTGGGGACACTTAGCTTAGCTGGGACAGTGTCTCAGGAAGCAGGAAACAGTTGGATCTGCAGAGTGGTGGCTGTGGAAAGTCAACACACAAGGGAAGTC-----CCCATCAATGTGTCGCGAGAGGTCCTGTGTCCAGCCACGGCTTTCAGAACCAAGGGCTTCTGCAGGTGTCCTAGGCCAGGGCTGCTCTGACCCTCCCATTCCTTT-CCCTCCAACCCCCTCCAATGTACAAAACGCAGCGCCTGCAGGTGTGCTCAGAAGAGGAACTCCGCAGAGTGCAGCCAAGTCTCTGACATG-------GGAGAGAGGGAGAGGATCCCCTCTGGAAGCCTGGCCTGGGCTCGCATGATCCTGTCCTGGTATGTCCCAGTGTCCAGCAGGAACTTCTTGGGTCCAAGACAAatctccagcttctggctccctgcatggcacta i manLeu1.NW_012103876v1 C 0 C 0 s colAng1.NW_012117422v1 141487 527 - 815015 AGGGCCCTGCCCAAGGCGATGAGGAGCTGCTGC-------AGCCAAGAGGGTTCCCCTGTGGATTC-ACTGCTGCTGCCTGCCACCTGGATCTGGGATGGCAAGACTGCTGGGGACACTTAGCTTAGCTGGGACAGTGTCTCAGGAAGCAGGAAACAGTTGGATCTGCAGAGTGGTGGCTGTGG--AGTCAGCACACAAGGGAAGTC-----CCCATCAGTGTGTAGCAGGAGGTCCTGTGTCCAGCCATGGCTTTCAGAACCAAGGGCTTCTGCAAGTGCCCCAGGCCAGGGCTGCTCTGACCCTCCCATTCCTTTCCCCTCCAACCCCCTCCAATGTACAAAATGCAGTGCCTGCAGGTGTGCTCAGAAGAGGAACTCCACAGAGTGGAGCCCAGTCTCTGACATG-------GGAGAGAGGGAGAGGATCCCCTCTAGAAGCCTGGCCTGGGCTCGCATGATCCTGTCCTGGTATGTCCCAGTGTCCAGCAGGAACTTCTTGGGTCCAAGACAAatctccagcttctggctccctgcttggcacta i colAng1.NW_012117422v1 C 0 C 0 s calJac3.chr2 140354564 522 - 204313951 AGGGCTCCACCCAAGGCTACAAGGAGGCACTGCTTGTAGTAGCCAAGAGAGTTCCCCGGCAGGTCC-ATTGCTGCTGCCCTCCACCTGGATCTGGGACAGCAAGGCTGCTGGGGACACTTAGCTTAGCTGGGATGATGTCTCAGGAAGCAGAAAACAGTTGGGTCTGCAGAGTGGTGGCTGTGGATGGTCAGCACACAAGGGAAGTCCCCTGCCCATTAGTGTGTAGCAGGAGGT-----------------CTTCCAAGACCATGGGCTTCCGCAGGTGTCCTGGGCCAGGGCTTCTCTGACCCTCACATTCCCTTCCCCTCCAACATCCTGCAATGTACAAAACTCAGTGTCTAAAGCTGTGCTCAGAAGAGGACCTCCGCAGAGTGGAGCCAAGTCTCCGACACG-------GGAGATGG--AGAGGATCTCCTCTAGAAGCCTTGCCTGGGCTCACATGATCCTGCCCTGCTGTGTTCCAGTGTCCAGCGGGAACTTCTTGCATCCAAGACAAATGTCCAGCTTCTGGCTCCTTGCTTGGCATTA i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 22872 520 + 10068113 TCGGCCCCACCCAAGGCTACAAGGAGGGACTGCCTGTAGCAGCCAAGAGAGTTCCCCGGCGGGTCC-ATTGCTGCTGCCCTCCACCTGGATCTGGGACAGCGAGGCTGCTGGGGACGCTTAGCTTGGCTGGGATGTCGTCTCAGGAAGCAGAAAACAGTTGGATCTGCAGAGTGGTGGCTGTGGATGGTCAGCACACA----AAGTCCCCTGCCCATTAGTGTGTAGCAGGAGGT-----------------CTTCCAGGACCATGGGCTTCCGCAGGTGCCCTGGGCCAGGGCTTCTCTGATCCTCACATTCCCTTCCCCTCCAACACCCTGCAATGTACAAAACACGGTGTCTGCAGGTGTGCTCAGAAGCGGACCTCCGCAGAGTGGAGCCAAGTCTCCGACGCG-------GGAGAGAGGCAGAGGATCTCCTCTAGAAGCCTGGCCTGGGCTCACGTGATCCTGCCCTGCCGTGTTCCAGTGTCCAGCAGGGACTTCTCGCATCCAAGACAAatctccagcttctggctccttgcttggcacta i saiBol1.JH378186 C 0 C 0 s aotNan1.NW_018505037v1 2580314 518 + 3417841 AGGGCCCCACCCAAGGCTACAAGGAGGCACTGCTTGTAGCAGCCAAGAGCGTTCCCCGGCAGGTCC-ATTGCTGCTGCCCTCCACCCGGATCTGGGACAGCAAGGCTGCTGGAGACACTTAGCTTAGCTGGGATGATGTCTCAGGAAGCAGAAAACAGTTGGATCTGCAGAGTGGTGGCTGTGGGCGGTCAGCCCACAGGGGAAGTCCCCTGCCCATTAGTGTGTAGCAGGAGGT-----------------CTTCCAGGACCACGGGCTTCCGCAGGTGCCCTGGGCCAGGGCTTCTCTGACCCTCACGTTCCCTTCCCCTCCAACACCCTGCAATGTACAAAACGCAGTGCCTGCAGGTGTGCTCAGAAGAGGACCTCCGCAGAGTGGAGCCAAGTCTCCGACACG-------GGAGAGAGGGAGAGGATCTCCACTAGAAGCCTGGCCTGGGCTCACGTGATCCTGCCCGGCTATGGTCCAGTGTCCAGCAGGAACTTCTTGCATCC------AATCTCCAGCTTCTGGCTCCTTGCTTGGCACTA i aotNan1.NW_018505037v1 C 0 C 0 e cebCap1.NW_016108322v1 81742 1426 + 99478 I a score=759837.000000 s hg38.chr5_KI270795v1_alt 121439 89 + 131892 ggtaggtgcctgataaatatttgcaggatTCTGTAAGAATCAGAATTCCAGTTGTGCTATCTGAGGAGTCCGACAGAAAAGCAGAAGAG s panTro5.chr5 3533140 89 - 181907262 GGTAGGTGCCTGATAAATATTTGCAGGATTCTGTAAGAATCAGAATTCCGGTTGTGCTATCTGAGGAGTCCGACAGAAAAGCAGAAGAG i panTro5.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 98765 89 + 152767 GGTGGGTGCCTGATAAATATTTGCAGGATTCTGTAAGAATCAGAATTCCAATTGTGCTATCTGAGGAGTCCGACAGAAAAGCAGAAGAG i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160355633 89 - 163208435 ggtaggtgcctgataaatatttgcaggatTCTGTAAGAATCAGAATTCCAGTTGTGCTATCTGAGGAGTCTGACAGAAAAGCAGAAGAG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3628017 88 - 180051392 GGTAGGTGCCTGAAAAATATTTGCAAGATTCTGT-AGAATCAGAATTCCCGTTGTGCTATCCGAGGAGTCCGACAGAAAAGCAGAAGAG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3817095 88 - 181584905 GGTAGGTGCCTGAAAAATATTTGCAAGATTCTGT-AGAATCAGAATTCCCGTTGTGCTATCCGAGGAGTCCGACAGAAAAGCAGAAGAG i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3836873 88 + 4899514 GGTAGGTGCCTGAAAAATATATGCAAGATTATGT-AGAATCAGAATTCCCATTGTGCTATCCGAGGAGTCCGACAGAAAAGCAGAAGAG i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012001120v1 3561088 88 - 3647740 GGTAGGTGCGTGACAAATATTCGCAGGATTCTGT-AGAATCAGAATTCCCGTTGTGCTATCTGAGGAGTCCGACAGAAAAGCAGAAGAG i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79695339 88 + 82825804 GGTAGGTGCCTGATAAATATTCGCAGGATTCTGT-AGAATCAGAATTCCCGTTGTGCTATCTGAGGAGTCCGACAGAAAAGCCGAAGAG i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1658648 88 - 1768974 ggtaggtgcctgataaatatttgcaggatTCTGT-AGAATCAGAATTCCCGTCGTGCTATCTGAGGAGTCTGACAGAAAAGCAGAAGAG i manLeu1.NW_012103876v1 C 0 C 0 s colAng1.NW_012117422v1 142014 88 - 815015 ggtaggtgcctgataaatatttgCAAGATTCTGT-AGAATCAGAATTCCAGTTGTGTTATATGAGGAGTCCGACAGAAAAGCAGAAGAG i colAng1.NW_012117422v1 C 0 C 0 s calJac3.chr2 140355086 89 - 204313951 GGTAGGTGCCTGATACATACCTGCAGGATTCTGTAAGAATCAGAATTCCAGTTGTGCTATCTGAGGAGTTAGTCAGAAAAGTGGAAGAG i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 23392 89 + 10068113 ggtaggtgcctgataagtatctgcaggatTCTGTAAGAATCAGAATTCCAGTTGTGCTATCTGAGGAGTTCGACAGAAAAGCGGAAGAG i saiBol1.JH378186 C 0 I 331 s cebCap1.NW_016108322v1 83168 89 + 99478 GGTAGGTGCCTGATAAATATCTGCAGGATTCTGTAAGAATCAGAATTCCAGTTGTGCTATCTGAGGAGTTCGACAGAAAAGCGGAAGAG i cebCap1.NW_016108322v1 I 1426 C 0 s aotNan1.NW_018505037v1 2580832 89 + 3417841 GGTAGGTGGCTGATAAGTATCTGCAGGATTCTGTAAGAATCAGAATTCCAGTTGTGCTATCTGAGGAGTTCGACAGAAAAGCGGAAGAG i aotNan1.NW_018505037v1 C 0 C 0 a score=2188283.000000 s hg38.chr5_KI270795v1_alt 121528 285 + 131892 GTTATACCAGTGGAGGGAAGGTGGTCTTGGGGTCTGAACAGTTCGTCCACTGCTGCTCAGGTAGGTGGTTTCA-CCCAGGGTCAGTTT------------TGTCTTCTGGAGATAGGCCAGGTGACCTGACTTCCTTCACCCTGGGGCACCTATCCCTTCCCTGCAACTGGAGAGCCGGTGTGGTCAGGAGCTGGCTGTCAGCACCCCAACCCCT-TTCGCCTTGCCAGCACTTAGGCCTCAGGCCCTGGTTCTTGGCGTGCCTTGTGTCCTCCTTTCCCTGGGGCAACATGGGCCCAT s panTro5.chr5 3533229 285 - 181907262 GTTATACCAGTGGAGGGAAGGTGGTCTTGGGGTCTGAACAGTTCGTCCACTGCTGCTCAGGTAGGTGGTTTCA-CCCAGGGTCAGTTT------------TGTCTTCTGGAGATAGGCCAGGTGACCTGACTTCCTTCACCCTGGGGCGCCTATCCCTTCCCTGCAACTGGAGAGCCGGTGTGGTCAGGAGCTGGCTGTCAGCACCCCACCCCCT-TTCGCCTTGCCAGCACTCAGGCCTCAGGCCCTGGTTCTTGGCGTGCCTTGTGTCCTCCTTTTCCTGGGGCAACATGGGCCCAT i panTro5.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 98854 285 + 152767 GTTATACCAGTGGAGGGAAGGTGGTCTTGGGGTCTGAACAGTTCGTCCACTGCTGCTCAGGTAGGTGGTTTCA-CCCAGGGTCAGTTT------------TGTCTTCTGGAGATAGGCCAGGTGACCTGACTTCCTTCACCCTGGGGCACCTATCCCTTCCCTGCAACTGGAGAGCCGGTGTGGTCAGGAGCTGGCTGTCAGCACCCCAACCCCT-TTCGCCTTGCCAGCACTTAGGCTTCAGGCCCTGGTTCTTGGCGTGCCTTGTGTCCTCCTTTCCCTGGGGCAACATGGGCCCAT i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160355722 284 - 163208435 GTTGTACCAGTGGAGGGAAGGTGGTCTTGGGGTCTGAACAGTTCGTCCACTGCTACTCAGGTAGGTAGTTTCA-CCCAGAG-CAGTTT------------TGTCTTCTGGAGATAGGCAAGGTGACCTGACTTCCTTCACCCGGGGGCGCCTATCCCTTCCCTGCAACTGGAGGGCCGGTGTGGTCAGGAGCTGGCTGTCAGCACCCCGCTCCCC-TTCGCCTTGCCAGCACTTAGGCCTGAGGCCCTGCTTCTTGGCGTGCCTTGCGTCCTCCTTACCCTGGGGCAACATGGGCCCAT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3628105 284 - 180051392 GTTGTACCAGTGGAGGGAAGGTGGCCTTGGGGTCTGAACAGTTCAGTCACTGCTGCTCAGGTAGGTAGTTTCA-CCC-GGGTCAGTTT------------TGTCTTCAGGAGAGGGGCGAGGTGACCTGACTTCCTCCACCAA-GGGCGCCTATCCCTTCCCTGCAACTGGAGAGCTGATGTGCTCAGGAACTGGCTGTCACCACCCCACCCCCCCTTCACCTTGCCAGCACTTAGGCCTCAGGCCCTGGTTCTTGGGGTGTCTTGTGTCCTCCTTACCCTACGGCAACATGGGCCCAT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3817183 284 - 181584905 GTTGTACCAGTGGAGGGAAGGTGGCCTTGGGGTCTGAACAGTTCAGTCACTGCTGCTCAGGTAGGTAGTTTCA-CCC-GGGTCAGTTT------------TGTCTTCAGGAGAGGGGCGAGGTGACCTGACTTCCTCCACCAA-GGGCGTCTATCCCTTCCCTGCAACTGGAGAGCTGATGTGCTCAGGAACTGGCTGTCACCACCCCACCCCCCCTTCACCTTGCCAGCACTTAGGCCTCAGGCCCTGGTTCTTGGGGTGTCTTGTGTCCTCCTTACCCTACGGCAACATGGGCCCAT i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3836961 281 + 4899514 GTTGTACCAGTGGAGGGAAGGTGGCCTTGGGGTCTGAACAGTTCAGTCACTGCTGCTCAGGTAGGTAGTTTCA-CCC-GGGTCAGTTT------------TGTCTTCAGGAGAGGGGCGAGGTGACCTGACTTCCTCCACCAA-GGGCGCCTATCCCTTCCCTGCAACTGGAGAGCTGATGTGCTCAGGAACTGGCTGT---CCCCCCACCCCCCCTTCACCTTGCCAGCACTTAGGCCTCAGGCCCTGGTTCTTGGGGTGTCTTGTGTCCTCCTTACCCTACGGCAACATGGGCCCAT i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012001120v1 3561176 283 - 3647740 GTTGTACCAGCGGAGGGAAGGTGGCCTTGGGGTCTGAACAGTTCAGCCACTGCTGCTCAGGCAGGTAGTTTCA-CCC-GGGTCAGTTC------------TGTCTTC-TGAGATGGGCGAGGTGACCCGACCCCCTTCACCCG-GGGCGCCTATCCCTTCCCTGCAACTGGAGAGCTGATGTGCTCAGGAACTGGCTGTCACCACCCCACCCCCTCTTCACCTTGCCAGCACTTAGGCCTCAGGCCCTGGTTCTTGGGGTGTCTTGTGTCCTCCTTACCCTATGGCAACATGGGCCCAT i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79695427 284 + 82825804 GTTATACCAGGGGAGGGAAGGTGGTCTTGGGGTCTGAACAGTTCATCCACTGCTGCTCAGGTAGGTAGTTTCA-CCC-GGGTCAGTTT------------TGTCTTCTGGAGAGGGGCGAGGTGACCTGACTTCCTCCACCAA-GGGCGCCTATCCCTTCCCTGCAACTGGAGAGCTGATGTGCTCAGGAACTGACTGTCACCACCCCACCCCCTCTTCACCTTGCCAGCACTTAGGCCTCAGGCCCTGATTCTTGGGGTGTCTTATGTCCTCCTTACCCTACGGCAACATGGGCCCAT i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1658736 284 - 1768974 GTTGTACCAGTGGAGGGAAGGTGGCCTTGGGGTCTGAACAGTTCAGCCACTGCTGCTCAGGCAGGTAGTTTCA-CCC-GGGTCAGTTT------------TGTCTTCAGGAGAGGGGCGAGGTGACCTGACTTCCTCCACTAA-GGGCGCCTATCCCTTCCCTGCAACTGGAGAGCTGATGTGCTCAGGAACTGGCTGTCACCACCCCACCCACTCTTCACCTTGCCAGCACTTAGGCCTCAGGCCCTGGTTCTTGGGGTGTCTTGTGTCCTCCTTACCCTACGGCAACATGGGCCCAT i manLeu1.NW_012103876v1 C 0 C 0 s colAng1.NW_012117422v1 142102 286 - 815015 GTTATACCAGTGGAGGGAAGGTGGTCTTGGGGTCTGAACAGTTCATCCACTGCTGCTCAGGTAGGTAGTTTCACCCC-AGGTCAGTTT------------TGTCTTCTGGAGATGGGCGAGGTGACCTGACTTCCTTCACCAAGGGGCGCCTATCCCTTCCCTGCAACTGGAGAGCTGATGTGCTCAGGAACTGGCTGTCACCACCCCACCCCTCCTTCACCTTGCCAGCACTTAGGCCTCAGGCCCTGATTCTTGGGGTGTTTTGTGTCCTCCTTACCCTGGGGCAACATGGGCCCAT i colAng1.NW_012117422v1 C 0 C 0 s calJac3.chr2 140355175 293 - 204313951 GTTTTACGAGGGGAGGGAAGGTGGACTTGGGGTCTGAA-AGTTTGTCCACTGCTGCTCAGGTAGGTCGTTTTC-CCCAGGGTCAATTTTCTGGAGATGGGTGTCTTCTGGAGATGGGTGAGGTGACCTGACTTCTTTCACTCT--GGCACTTGTCCCTTCCCTGAAACTGGACAGCTGATATGGTCGGGAGCTGGCTGTTACCACCCTATCCCCC-TTCACCTTGCCAGCGCTTAGGCCTCAGGTCCTGGTTCCCGGAGT-TCCTGTGTCCTCCTTACCCTGGGGCAACATGGGCCCAT i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 23812 282 + 10068113 GTTAAGAGAGGGGAGGGAAGGTGAACCTGGAGTCTGAACAGTTCGTCCACGGCTGCTCAAGTAGGTAGCTTTT-CCCAGGGTCAGTTT------------TGTCTTCTGGAGATGGCTGAGGTGACCTGACTTCTTTCACCCT--GGTGCTGGTCCCTTCCCTGAAACTGGACAGCCGATATGGTCGGGAGCTGGCTGTTACCACCCTGTCCCCC-TTCACCTCGCCAGCGCTTAGGCCTCGGGTCCTGGTTCCCGGAGT-TCCTGTGTCGTCCTTACCCTGGGGCAACATGGGCCCAT i saiBol1.JH378186 I 331 C 0 s cebCap1.NW_016108322v1 83257 281 + 99478 GTTATACAAGGGGAGGGAAGGTGGACTTGGGGTCTGAACAGTTCAT-CACTGCTGCTCAGGTAGGTAATTTTT-CCCAGGGTCAGTTT------------TGTCTTCTGGAGATGGGTGAGGTGACCTGACTTCTTTCACCCT--GGCGCTGGTCCCTTCCCTGAAACTGGACAGCCGATATGGTCGGGAGCTGGCTGTTACCACGCTGTCCCCC-TTCACCTTGCCAGCGCTTAGGCCTCGGGTCCTGGTTCCCAGAGT-TCCTGTGTCCTCCTTACCCTGGGGCAACATGGGCCCAT i cebCap1.NW_016108322v1 C 0 I 13 s aotNan1.NW_018505037v1 2580921 267 + 3417841 GTTATACGAGGGGAGGGAAGGTGGACTCGGGGTCTGAACAGTTCGTCCACTGCTGCTCAGGGA----------------GGTCGGTTT------------TGCCTTCTGGAGATGGGTGAGGTGACCTGACTTCTTTCACCCT--GGCGCTTGTCCCTTCCCTGAAACTGGACAGCCGATGTGGTCGGGAGCTGGCTGTTACCACCCTGTCCCCC-TTCACCTTGCCAGCGCTTAGGCCTCGGGTCCTGGTTCCCAGAGT-TCCTGTGTCCTCCTTACCCCGGGGCAACATGGGCCCAT i aotNan1.NW_018505037v1 C 0 I 14 a score=107132.000000 s hg38.chr5_KI270795v1_alt 121813 19 + 131892 CACACTGTAGAAAA-TGCTG s panTro5.chr5 3533514 19 - 181907262 CACACTGTAGAAAA-TGCTG i panTro5.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 99139 19 + 152767 CACACTGTAGAAAA-TGCTG i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160356006 19 - 163208435 CACACTGTAGGAAA-TGCTG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3628389 19 - 180051392 CACACTGAAGAAAA-TGTTG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3817467 19 - 181584905 CACACTGAAGAAAA-TGTTG i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3837242 20 + 4899514 CACACTGCAGAAAAGTGTTG i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012001120v1 3561459 19 - 3647740 CACACTGTAGAAAA-TGTTG i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79695711 19 + 82825804 CACACTGTAGAAAA-TGTTG i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1659020 19 - 1768974 CACACTGCAGAAAA-TGTTG i manLeu1.NW_012103876v1 C 0 C 0 s colAng1.NW_012117422v1 142388 19 - 815015 CACACTGCAGAAAA-TGTTG i colAng1.NW_012117422v1 C 0 C 0 s calJac3.chr2 140355468 18 - 204313951 -ATGCTCTAGAAAA-TGCTG i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 24094 18 + 10068113 -ATGCTCTAGAAAA-TGCTG i saiBol1.JH378186 C 0 C 0 e cebCap1.NW_016108322v1 83538 13 + 99478 I e aotNan1.NW_018505037v1 2581188 14 + 3417841 I a score=743621.000000 s hg38.chr5_KI270795v1_alt 121832 153 + 131892 GATTCTCCCATAGGTAACCTGTCTACTAGACAAAATACAGTGACTACCTATGTCCCATTCAGAGGAACAAGGACGCCAGGGCTCAGGTGACTCAGGAGTCCTGCAACCAAATTTGATTGGTCCCTAAGCCCCAAAGCCTTCAGCCATATAGCT s panTro5.chr5 3533533 153 - 181907262 GATTCTCCCAGAGGTAACCTGTCTACTAGACAAAATACAGTGACTACCTATGTCCCATTCAGAGGAACAAGGACGCCAGGGCTCAGGTGACTCAGGAGTCCTGCAACCAAATTTGATTGGTCCCTAGGCCCCAAAGCCTTCAGCCATGTAGCT i panTro5.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 99158 153 + 152767 GATTCTCCCATAGGTAACCTGTCTACTAGACAAAATACAGTGACTACCTATGTCCCATTCAGAGGAACAAGGACGCCAGGGCTCAGGTGACTCAGGAGTCCTGCAACCAAATTTGATTGGTCCCTAAGCCCCAAAGCCTTCAGCCATATAGCT i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160356025 153 - 163208435 GATTCTCCCAGAGGTAACCTGTCCACTAGACAAAATACAGTGACTACCTATGTCCCATTCAGAGGAACAAGGACGCCAGGGCTCAGGTGACTCAGGAGTCCTGCAACCAAATTTGATTGGTCCCTAAGCCCCAAAGCCTTCAACCATATAGCT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3628408 153 - 180051392 GATTCTCCCAGAGGTAACCTGTCTACTAGACAAAATACAGTGACTACCTATGTCCCATTCAGAGGAACAAAGACGCCAGGTCTCAGGTGACTCAGGAGTCCTGCAACCAAATTTGATTGGTCCCTAAGCCCCAAAGCCTTCAACCATATAGCT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3817486 153 - 181584905 GATTCTCCCAGAGGTAACCTGTCTACTAGACAAAATACAGTGACTACCTATGTCCCATTCAGAGGAACAAAGACGCCAGGTCTCAGGTGACTCAGGAGTCCTGCAACCAAATTTGATTGGTCCCTAAGCCCCAAAGCCTTCAACCATATAGCT i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3837262 153 + 4899514 GATTCTCCCAGAGGTAACCTGTCTACTAGACAAAATACAGTGACTACCTATGTCCCATTCAGAGGAACAAAGACGCCAGGTCTCAGGCGACTCAGGAGTCCTGCAACCAAATTTGATTGGTCCCTAAGCCCCAAAGCCTTCAACCATATAGCT i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012001120v1 3561478 152 - 3647740 GATTCTCCCAGAGGTAACCTGTCTACTAGACAAAATACAGTGACTACCTATGTCCCATTCAGAGGAACAAAGACACCAGGTCTCAGGTGACTTAGGAGTCCTGCAACCAAATTTGATT-GTCTCTAAGCCCCAAAGCCTTCAGCCATTTAGCT i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79695730 153 + 82825804 GATTCTCCCAGAGGGAACCTGTCTACTAGACAAAATACAGTGACTACCTGTGTCCCATTCAGAGGAACAAAGACGCCAGGTCTCAGGCGACTCAGGAGTCCTGCAACCAAATTTGATTGGTCCCTAAGCCCCAAAGCCTTCAGCCATATAGCT i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1659039 152 - 1768974 GATTCTCCCAGAGGTAACCTGTCTACTAGACAAAATACAGTGACTACCTATGTCCCGTTCAGAGGAACAAAGACGCCAGGTCTCAGGTGACTCAGGAGTCCTGCAACCAAATTTGATT-GTCTCTAAGCCCCAAAGCCTTCAGCCATTTAGCT i manLeu1.NW_012103876v1 C 0 C 0 s colAng1.NW_012117422v1 142407 149 - 815015 GATTCTCCCAGAGGTAAC----CTACTAGACAAAATACAGTGACTACCTATGTCCCATTCAGAGGAACAAAGACGCCAGGTCTCAGGCGACTCAGGAGTCCTGCAACCAAATTTGATTGGTCCCTAATCCCCAAAGCCTTCAGCCATATGGCT i colAng1.NW_012117422v1 C 0 C 0 e cebCap1.NW_016108322v1 83538 13 + 99478 I e saiBol1.JH378186 24112 0 + 10068113 C e calJac3.chr2 140355486 0 - 204313951 C e aotNan1.NW_018505037v1 2581188 14 + 3417841 I a score=6006.000000 s hg38.chr5_KI270795v1_alt 121985 1 + 131892 T s panTro5.chr5 3533686 1 - 181907262 T i panTro5.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 99311 1 + 152767 T i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160356178 1 - 163208435 T i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3628561 1 - 180051392 T i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3817639 1 - 181584905 T i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3837415 1 + 4899514 T i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012001120v1 3561630 1 - 3647740 T i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79695883 1 + 82825804 T i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1659191 1 - 1768974 T i manLeu1.NW_012103876v1 C 0 C 0 s colAng1.NW_012117422v1 142556 1 - 815015 T i colAng1.NW_012117422v1 C 0 C 0 s cebCap1.NW_016108322v1 83551 1 + 99478 T i cebCap1.NW_016108322v1 I 13 C 0 e saiBol1.JH378186 24112 0 + 10068113 C e calJac3.chr2 140355486 0 - 204313951 C e aotNan1.NW_018505037v1 2581188 14 + 3417841 I a score=19021.000000 s hg38.chr5_KI270795v1_alt 121986 4 + 131892 GCTA s panTro5.chr5 3533687 4 - 181907262 CCTA i panTro5.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 99312 4 + 152767 GCTA i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160356179 4 - 163208435 CCTA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3628562 4 - 180051392 CCTA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3817640 4 - 181584905 CCTA i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3837416 4 + 4899514 CCTA i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012001120v1 3561631 4 - 3647740 CCTA i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79695884 4 + 82825804 CCTA i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1659192 4 - 1768974 CCTA i manLeu1.NW_012103876v1 C 0 C 0 s colAng1.NW_012117422v1 142557 4 - 815015 CCTA i colAng1.NW_012117422v1 C 0 C 0 s cebCap1.NW_016108322v1 83552 4 + 99478 GCTG i cebCap1.NW_016108322v1 C 0 C 0 s aotNan1.NW_018505037v1 2581202 4 + 3417841 GCTG i aotNan1.NW_018505037v1 I 14 C 0 e saiBol1.JH378186 24112 0 + 10068113 C e calJac3.chr2 140355486 0 - 204313951 C a score=481334.000000 s hg38.chr5_KI270795v1_alt 121990 60 + 131892 GCCATGTACAGATACTGATGACCCCCCC-AA--ACA--CACAGTCATTCTCTTCCCAACCTCCCC s panTro5.chr5 3533691 61 - 181907262 GCCATATACAGATACTGATGACCCCCCCCAA--ACA--CACAGTCATTCTCTCCCCAACCTCCCC i panTro5.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 99316 59 + 152767 GCCATATACAGATACTGATGACCCCCC--AA--ACA--CACAGTCATTCTCTTCCCAACCTCCCC i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160356183 61 - 163208435 GCCATATACAGATACTGATGACCCCCCAAAC--ACA--CACAGTCATTCTCTCCCCAACCTCCCC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3628566 60 - 180051392 GCCATATACAGATACTGAAAACCTCCCC-AA--ACA--CACAGTCATTCTCTCCCCAACCTCCCC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3817644 60 - 181584905 GCCATATACAGATACTGAAAACCTCCCC-AA--ACA--CACAGTCATTCTCTCCCCAACCTCCCC i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3837420 60 + 4899514 GCCATATACAGATACTGAAAACCTCCCC-AA--ACA--CACAGTCATTCTCTCCCCAACCTCCCC i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012001120v1 3561635 60 - 3647740 GCCATATACAGATACTGAAAACCTCCCC-AA--GCA--CACAGTCATTCTCTCCCCAACCTCCCC i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79695888 62 + 82825804 GCCATATACAGATACTGAAAACCTCCCC-AAACACA--CACAGTCATTCTCTCCCCAGCCTCCCC i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1659196 60 - 1768974 GCCATATACAGATACTGAAAACCTCCCC-AA--GCA--CACAGTCGTTCTCTCCCCAACCTCCCC i manLeu1.NW_012103876v1 C 0 C 0 s colAng1.NW_012117422v1 142561 59 - 815015 GCCATATACAGATACTG-AAACCTCCCC-AA--ACA--CACAGTCATTCTCTCCCCAACCTCCCC i colAng1.NW_012117422v1 C 0 C 0 s calJac3.chr2 140355486 62 - 204313951 GCCATATACAGATACTGAAGACTCCCCC-AA--ACACTCACAGTCATTCTCTCCCCATCCTCCCC i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 24112 58 + 10068113 GCC----ACAGATACTGAAGACTCCCCC-AA--ACACGCACAGTCATTCTCACCCCAACCTCCCT i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016108322v1 83556 62 + 99478 GCCATATACAGATACTGAAGACTCCCCC-AA--ACACGCACAGTCATTCTCTCCCCAACCTCCCT i cebCap1.NW_016108322v1 C 0 C 0 s aotNan1.NW_018505037v1 2581206 62 + 3417841 GCCATATACAGATACCGAAGACTCCCCC-AA--ACACGCACAGTCATTCTCTCCCCAACCTCCCC i aotNan1.NW_018505037v1 C 0 I 51 a score=320072.000000 s hg38.chr5_KI270795v1_alt 122050 47 + 131892 GACATCCACATACCTGGGCAATGGCCACTCTGTGCAACTGACTCCTA s panTro5.chr5 3533752 47 - 181907262 GACATCCACATACCTGGGCAATGGCCACTCTGTGCAGCTGACTCCTA i panTro5.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 99375 47 + 152767 GACATCCACATACCTGGGCAATGGCCACTCTGTGCAACTGACTCCTA i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160356244 47 - 163208435 GACACCCACATACCTGGGCAATGGCCACTCTGTGCAGCTGACTCCTA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3628626 47 - 180051392 GACACCCACACACCTCGGCAATGGCCACTCTGTGCAGCGGACCCCTA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3817704 47 - 181584905 GACACCCACACACCTCGGCAATGGCCACTCTGTGCAGCGGACCCCTA i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3837480 47 + 4899514 GACACCCACACATCTGGGCAATGGCCACTCTGTGCAGCGGACCCCTA i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012001120v1 3561695 47 - 3647740 CACACCCACACACCTGGGCAATGGCCACTCTGTGCAGCGGACCCCTA i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79695950 47 + 82825804 GACACCTACACACCTGGGCAATGGCCACTCTGTGCAGCGGACCCCTA i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1659256 47 - 1768974 GACACCCACACACCTGGGCAATGGCCACTCTGTGCAGCGGACCCCTA i manLeu1.NW_012103876v1 C 0 C 0 s colAng1.NW_012117422v1 142620 47 - 815015 GACACCCACACACCTGGCCAGTGGCCACTCTGTGCAGCTAACCCCTA i colAng1.NW_012117422v1 C 0 C 0 s calJac3.chr2 140355548 46 - 204313951 GACA-GCACACACCCGGGCAATGGCCATTCTGTGCGGATGACCCTTT i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 24170 46 + 10068113 GACA-CCGCACACCTGGGCAATGGCCATTCTGTGCAGATGACCCTTT i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016108322v1 83618 46 + 99478 GACA-CCACACACCTGGGCAATGGCCATTCTGTGCAGATGACCCTTT i cebCap1.NW_016108322v1 C 0 C 0 e aotNan1.NW_018505037v1 2581268 51 + 3417841 I a score=1999150.000000 s hg38.chr5_KI270795v1_alt 122097 228 + 131892 CCCCTCCTCCACCTTGGGCTGCTTGTAGGGTGCCATTACGGCAGTAAGGCGCT-----CCCTGGGCATCCAGATGCTGGTTGTGAGGGGGTGAATTGAGGGGCAGGCTGGAGGGAGGGGTGATCTTGGTGGGGTGGGAACTTGGAAGACTTCCAGGCTAATTTTGCCCACATTCAAAAGAGGAGTCTTAGAGAGCCTCTTTAGTTCAGCTTCTTCTTCCAGCTAATAGGAGAG s panTro5.chr5 3533799 228 - 181907262 CCCCTCCTCCACCTTGGGCTGCTTGTAGGGTGCCATTACGGCAGTAAGGCGCT-----CCCTGGGCATCCAGATGCTGGTTGTGAGGGGGTGAATTGAGGGGCAGGCCGGAGGGAGAGGTGATCTTGGTGGGGTGGGAACTTGGAGGACTTCCGGGCTAATTTTGCCCACATTCAAAAGAGGAGTCTTAGAGAGCCTCTTTAGTTCAGCTTCTTCTTCCAGCTAATAGGAGAG i panTro5.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 99422 221 + 152767 CCCCTCCTCCACCTTGGGCTGCTTGTAGGGTGCCATTACGGCAGTAAGGCGCT-----CCCTGGGCATCCAGATGCTGGTTGTGAGGGGGTGAATTGAGGGGCAGGCCGGAGGGAGGGGTGATCTTGGTGGGGTGGGAACTTGGAAGACTTCCAGGCTAATTTTGCCCACATTCAAAAGAGGAGTCTT----AGCCTCTTTAGTTCA---CCTTCTTCCAGCTAATAGGAGAG i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160356291 227 - 163208435 -CCCTCCCCAACCTTGGGCTGCTTGTAGGGTGCCATTACAGCAGTGAGGCGCT-----CCCTGGGCATCCAGATGCTGGTTGTGAGGGGGTGAATTGAGGGGCAGGCTGGAGGGAGGGGTGATCTTGGTGGGGTGGGAACTTGGAAGACTTCCAGGCTAATTTTGCCCAAATTCAAAAGAGGAGTCTTAGAGAGCCTCTTTAGTTCAGCTTCTTCTTCCAGCTAATAAGAGAG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3628673 228 - 180051392 CCCCTCCTCCACCTTGGGCTGCTTGTTGGGTGCCATGACAGCAGTAAGGCGCG-----CCCTGGGCATCCAGATGCTGGCTGTGAGGGGGTGAATTGAGGGGCAGGCTGGAGGGAGGGGTGATCTCGGTGAGGTGGGAACTTGGAAGACTTCCAGGCTAATTTTGCCCAAATTCAAAAGAGGAGTCTCAGAGAGCTTCTTGAGTTCAGCTTCTTCTTCCAGCTAATAAGCGAG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3817751 228 - 181584905 CCCCTCCTCCACCTTGGGCTGCTTGTTGGGTGCCATGACAGCAGTAAGGCGCG-----CCCTGGGCATCCAGATGCTGGCTGTGAGGGGGTGAATTGAGGGGCAGGCTGGAGGGAGGGGTGATCTCGGTGAGGTGGGAACTTGGAAGACTTCCAGGCTAATTTTGCCCAAATTCAAAAGAGGAGTCTCAGAGAGCCTCTTGAGTTCAGCTTCTTCTTCCAGCTAATAAGCGAG i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3837527 233 + 4899514 CCCCTCCTCCACCTTGGGCGGCTTGTTGGGTGCCATGACAGCAGTAAGGCGCTGCTGCTCCTGGGCATCCAGATGCTGGCTGTGAGGGGGTGAATTGAGGGGCAGGCTGGAGGGAGGGGTGATCTCGGTGAGGTGGGAACTTGGAAGACTTCCAGGCTAATTTTGCCCAAATTCAAAAGAGGAGTCTCAGAGAGCCTCTTGAGTTCAGCTTCTTCTTCCAGCTAATAAGCGAG i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012001120v1 3561742 228 - 3647740 CCCCTCCTCCACCTTGGGCTGCTTGTTGGGTGCCATGACAGCAGTAAGGCGCG-----CCCTGGGCATCCAGATGCTGGCTGTGAGGGGGTGAATTGAGGGGCAGGCTGGAGGGAGGGGTGATCTCGGTGAGGTGGGAACTTGGAAGACTTCCAGGCTAATTTTGCCCAAATTCAAAAGAGGAGTCTCAGAGAGCCTCTTGAGTTCAGCTTCTTCTTCCAGCTAATAAGCGAG i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79695997 228 + 82825804 CCCCTCCTCCACCTTGGGCTGCTTGTTGGGTGCCATGACAGCAGTAAGGCGCG-----CCCTGGGCATCCAGATGCTGGCTGTGAGGGGGTGAATTGAGGGGCAGGCTGGAGGGAGGGGTGATCTCGGTGAGGTGGGAACTTGGAAGACTTCCAGGCTAATTTTGCCCAAATTCAAAAGAGGAGTCTCAGAGAGCCTCTTGAGTTCAGCTGCTTCTTCCAGCTAATAAGCGAG i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1659303 228 - 1768974 CCCCTCCTCCACCTTGGGCTGCTTGTTGGGTGCCATGACAGCAGCAAGGCGCG-----CCCTGGGCATCCAGATGCTGGCTGTGAGGGGGTGAATTGAGGGGCAGGCTGGAGGGAGGGGTGATCTCGGTGAGGTGGGAACTTGGAAGACTTCCAGGCTAATTTTGCCCAAATTCAAAAGAGGAGTCTCAGAGAGCCTCTTGAGTTCAGCTTCTTCTTCCAGCTAATAAGCGAG i manLeu1.NW_012103876v1 C 0 C 0 s colAng1.NW_012117422v1 142667 227 - 815015 CCCCTCCTCCACCTTGGGCTGCTTGTTGGGTGCCATTACAGCAGTAAGGCGCT-----CCCTGGGCATCCAGATGCTGGCTGTGAGGGGGTGAATTGAGGACCAGGCTGGAGGGAGGGGTGATCTCGGTGAGGTGGGAACTTGGAAGACTTTCAGGCTAATTTTG-CCAAATTCAAAAGAGGAGTCTCAGAGAGCCTCTTGAGTTCAGCTTCTTCTTCCAGCTAATAAGAGAG i colAng1.NW_012117422v1 C 0 C 0 s calJac3.chr2 140355594 220 - 204313951 CCTCTCCTCCACCTTGGGCTGCTTGTTGGGTGCTGGGACAGCAGTAAGGCGCC-----CCCTGGCTGTCCAGATGCTGGTTGTGAGGGGGTGAGTTGAGGGGCAGGCTGGAGGGAGGGATGATCTTGGTGGGGTGGGAACTTGGAAGACTTCCAGGCTAATTTTGCTCAACTTCAAAAGAGGAGTCTCAGAGAGCCTC-----TTCAG---CTTCTTCCAGCTAATAAGAGAG i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 24216 225 + 10068113 CCCCTCCTCCACCTTGGGCTGCTTGTGGGGTGCTGGGACAGCAGGAAGGCGCC-----CCCTGGCCATCCAGATGCTAGTTGTGAGGGGGTGAGTTGAGGGGCAGGCTGGAGAGAGGGGTGATCTTGGTGGAGTGGGAACTTGGAAGACTTCCAGGCTAATTTTGCTCAAATTCAAAAGAGGAGTCTCAGAGAGCCTCTTGAGTTCAG---CTTCTTCCAGCTAATAAGAGAG i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016108322v1 83664 225 + 99478 CCCCTCCTCCACCTTGGGCTGCTTGTTGGGTGCTGGGACAGCAGTAAGGCGCC-----CCCTGGCCATCCAGATGCTGGTTGTGGGGGGGTGAGTTGAGGGGCAGGCTGGAGGGAGGGGTGATCTTGGTGGGGTGGGAACTTGGAAGACTTCCAGGCTAATTTTGCTCAAATTCAAAAGAGGAGTCTCAGAGAGCCTCTTGAGTTCAG---CTGCTTCCAGCTAATAAGAGAG i cebCap1.NW_016108322v1 C 0 M 1160 s aotNan1.NW_018505037v1 2581319 225 + 3417841 CCCCTCCTCCACCTTGGGCCGCTTGTTGGGTGCTGGGACAGCAGTAAGCAGCC-----CACTGGCCGTCCAGATGCTGGTTGTGAGGGGGTGAGTTGAGGGGCAGGCTGGAGGGAGGGGTGATCTTGGTGGGGTGGGAACTTGGAAGACTTCCAGGCTAATTTTGCTCAAATTCAAAAGAGGAGTCTCAGAGAGCTTCTTGAGTTCAG---CTTCTTCCAGCTAATAAGAGAG i aotNan1.NW_018505037v1 I 51 C 0 a score=3103540.000000 s hg38.chr5_KI270795v1_alt 122325 472 + 131892 AGTGTGCGTGCTCCAATTTCGGGGGAGAGGTTCAGATAATTTCAATAAAACCTGG-AAAAAG---CCATTGTAATGCCCACACAGCACAGTC-TTAGAGCAGGCAGAGCC---CCTGCTGTGAGGCCAGTCTT-GGAGAGCCGTGGGCCTCCTGCAGTAGCGCCTCTCT-GGAGGAGCGGGGCGAGTAGTTCCGGGAGCATAgtgggtagttctcagggtccagggcatgtgccacccggagtcgcagccccttctcccacttctagcccagggtcccagtactgggattccctgaccgaatggcacccatcctgctATTCCCGGATTCCATCTTGCCAAGGGCAGGCCGAGccttaggccccaggaagccaagtgggggcaccatttgcggaggtggggggtgtagaccgctccaggactggcaagtggcgtccactctccagctgggagagccctctcctggtaccagagggagccgagc s panTro5.chr5 3534027 475 - 181907262 GGTGTGCGTGCTCCAATTTCGGGGGAGAGGTTCAGATAATTTCAATAAAACCTGG-AGAAAGGAGCCATCGTAACGCCCACACGGCACAGTC-TTAGAGCTGGCAGAGCC---CCTGCTGTGAGGCCAGCCTT-GGAGAGCCGTGGGCCTCCTGCAGTAGCGCCTCTCT-GGAGGAGCGGGGCGAGTAGTTCCGGGAGcagagtgggtagttctcagggtccagggcatgtgccacccggagtcgcagccccttctcccacttctagcccagggtcccagtactgggattccctgaccgaatggcacccatcctgctATTGCCGGAGTCCATCTTGCCAAGGGCAGGCCGAGCCTCAGGACCCAGGGAGCCAAGTGGGGGCACCGTTTGCGAAGGTGGGGGGTGTAGACCGCTCCAGGACTGGCAAGTGGCGTCCACTCTCCAGCTGGGAGAGCCCTCTCCTGGCACCAGAGGGAGCCGAGC i panTro5.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 99643 475 + 152767 GGTGTGCGTGCTCCAATTTCGGGGGAGAGGTTCAGATAATTTCAATAAAACCTGG-AAAAAGGAGCCATTGTAATGCCCACACAGCACAGTCTTTAGAGCAGGCAGAG-C---CCTGCCGTGAGGCCAGTCTT-GGAGAGCCGTGGGCCTCCTGCAGTAGCGCCTGTCT-GGAGGAGCGGGGCGAGTAGTTCCGGGAGCATAgtgggtagttctcagggtccagggcatgtgccacccggagtcgcagccccttctcccacttctagcccagggtcccagtactgggattccctgaccgaatggcacccatcctgctATTCCCGGATTCCATCTTGCCAAGGGCAGGCCGAGCCTTAGGCCCCAGGAAGCCAAGTGGGAGCACCATTTGCGGAGGTGGGGGGTGTAGACCGCTCCAGGACTGGCAAGTGGCGTCCACTCTCCAGCTGGGAGAGCCCTCTCCTGGTACCAGAGGGAGCCGAGC i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160356518 474 - 163208435 GGTGTGCGTGCTCCAGTTGCGGGGGAGAGGTTCAGATAATTTCAATAAAACCTGG-AAAAAGGAGCCATTGTAATGAGCACCCAGCACAGTC-TTAGAGCAGGCAGAGCC---TCTGCTGTGAGGCCAGCCTT-GGAGAGCCCCGGGCCTCCTGCAGTAGCGCCTCTCT-GG-GGAGCGGGGCGAGTAGTTCCGGGAGCAGAGTGGGTAGTTCTCAGCGTCCAGGGCATGTGCCACCCGGAGTCGCAGCCCCTTCTCCCACTTCTAGCCCAGGGTCCCAGTACTGGGATTCCCTGACCGAATGGCACCCATCCTGCTCTTCCCGGGGTCCATCTTGCCAAGGGCAGGCCAAGCCTTAGGCCCCAGGGAGCCAAGTGGGGGCACCATTTGCGGAGGTGGACGGTGTAGACCGTTCCAGGACTTGCAAGTGGCGTCCACTCTCCAGCTGGCAGAACCCTATCCTGGTACCAGAGGGAGCCGAGC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3628901 466 - 180051392 GGTGTGGGTGCTCCAGTTTCGGGGGAGAGGTTCAGATAATTTCAATAAAACCTGG-AAAAAGGAGCCATTGTAATGCTCACCCAGCACAGTC-TCAGAGCAGGCAGAGCC---CCTGCTGTGAGGCCAGCATT-GGAGAGCCCTGGGCCTCCTGCAGTAGCGCCTCTCT-GG-GGAGCGGGGCGAGTAGTTCCGGGAGCAGGGTGGGTAGTTCTCAGGGTCCAGGGCATGTGCCACCCCGAGCCGCAGCCCCTTCTCCCACTTCAAGCCCAGGGTCCCAGTGCTGGGATTCCCTGACCGAATGGCACCCATCCAGCTATTCCCGGAGTCCATCTTGCCCAGGGCAGGCCAAGCCTTGAGTCTCAGGGAGCCAAGTGGGGGTACCATTTGCGGAGGTGGGCGGTGTAGACCGCTCCAGGCCTTGCGAGTGGCGTCCCCCCACGAGCTGGGAGAGCCCTCTCCTG--------GGGAGCCGAGC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3817979 466 - 181584905 GGTGTGGGTGCTCCAGTTTCGGGGGAGAGGTTCAGATAATTTCAATAAAACCTGG-AAAAAGGAGCCATTGTAATGCTCACCCAGCACAGTC-TCAGAGCAGGCAGAGCC---CCTGCTGTGAGGCCAGCATT-GGAGAGCCCTGGGCCTCCTGCAGTAGCGCCTCTCT-GG-GGAGCGGGGCGAGTAGTTCCGGGAGCAGGGTGGGTAGTTCTCAGGGTCCAGGGCATGTGCCACCCCGAGCCGCAGCCCCTTCTCCCACTTCAAGCCCAGGGTCCCAGTGCTGGGATTCCCTGACCGAATGGCACCCATCCAGCTATTCCCGGAGTCCATCTTGCCCAGGGCAGGCCAAGCCTTGAGTCTCAGGGAGCCAAGTGGGGGTACCATTTGCGGAGGTGGGCGGTGTAGACCGCTCCAGGCCTTGCGAGTGGCGTCCCCCCTCGAGCTGGGAGAGCCCTCTCCTG--------GGGAGCCGAGC i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3837760 466 + 4899514 GGTGTGGGTGCTCCAGTTTCCGGGGAGAGGTTCAGATAATTTCAATAAAACCTGG-AAAAAGGAGCCATTGTAATGCTCACCCAGCACAGTC-TCAGAGCAGGCAGAGGC---CCTGCTGTGAGGCCAGCATT-GGAGAGCCCTGGGCCTCCTGCAGTAGCGCCTCTCT-GG-GGAGCGGGGCGAGTAGTTCCGGGAGCAGGGTGGGTAGTTCTCAGGGTCCAGGGCATGTGCCACCCCGAGCCGCAGCCCCTTCTCCCACTTCAAGACCAGGGTCCCAGTGCTGGGATTCCCTGACCGAATGGCACCCATCCAGCTATTCCCGGAGTCCATCTTGCCCAGGGCAGGCCAAGCCTTGAGTCTCAGGGAGCCAAGTGGGGGTACCATTTGCGGAGGTGGGCGGTGTAGACCGCTCCAGGCCTTGCGAGTGGCGTCCCCCCTCGAGCTGGGAGAGCCCTCTCCTG--------GGGAGCCGAGC i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012001120v1 3561970 466 - 3647740 GGTGTGGGTGCTCCAGTTTCGGGGGAGAGGTTCAGATAATTTCAACAAAACGTGG-AAAAAGGAGCCATTGTAATGCTCACCCAGCACAGTC-TCAGAGCAGGCAGAGCC---CCTGTTGTGAGGCCAGCATT-GGAGAGCCGTGGGCCTCCTGCAGTAGTGCCTCTCT-GG-GGAGCGGGGCGAGTAGTTCCGGGAGCAGGGTGGGTAGTTCTCAGGGTCCAGGGCACGTGCCACCCCGAGCCGCAGCCCCTTCTCCCACTTCTAGCCCAGGGTCCCAGTACTGGGATTCCCTGACCGAATGGCACCCATCCAGCTATTCCCGGAGTCCATCTTGCCCAGGGCAGGCCAAGCCTTGAGTCTCAGGGAGCCAAGTGGGGGCACCATTTGCGGAGGTGGGCGGTGTAGAGAGCTCCAGGCCTTGCGAGTGGCGTCCCCCCTCGAGCTGGGAGAGCCATCTCCTG--------GGGAGCCCAGC i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79696225 433 + 82825804 GGTGTGGGTGCTCCAGTTTCGGGGGAGAGGTTCAGATAATTTCAACAAAACCTGG-AAAAAGGAGCCATTGTAATGCTCACCCAGCACAGTC-TTAGAGCAGGCAGAGCC---CCTGCTGTGAGGCCAGCACT-GGAGAGCCCTGGGCCTCCTGCAGTAGCGCCTCTCT-GG-GGAGCGGGGCGAGTAGTTCCGGGAGCAGGGTGGGTAGTTCTCAGGGTCCAGGGCATGTGCCACCCCGAGCCGCAGCCCCTTCTCCCACTTTTAGCCCAGGGTCCCAGTACTGGGATTCCCTGACCGAATGGCACCCATCCAGCTATTCCCGGAGCCCATCTTGCCCAGGGCAGGTCAAGCCTTGAGTCTCAGAGAGCCAACTGGGGGCACCATTTGCG---------------------------------GAGTGGCGTCCCCCCTCGAGCTGGGAGAGCCCTCTCCTG--------GGGAGCCGAGC i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1659531 466 - 1768974 GGTGTGGGTGCTCCAGTTTCGGGGAAGAGGTTCAGATAATTTCAGTAAAACCTAG-AAAAAGGAGCCATTGTATTGCTCACCCAGCACAGTC-TCAGAGCAGGCAGAGCC---CCTGCTGTGAGGCCAGCATT-GGACAGCCGTGGGCCTCCTGCAGTAGCGCCTCTCT-GG-GGAGCTGGGCGAGTAGTTCCGGGAGCAGGGTGGGTAGCTCTCAGGGTCCACGGCACATGCCACCCCGAGCCGCAGCCCCTTCTCCCACTTCAAGCCCAGGGTCCCAGTGCTGGGATTCCCTGACCGAATGGCACCCATCCAGCTATTCCCGGAGTCCATCTTGCCCAGGGCAGGCCAAGCCTTGAGTCTCAGGGAGCCAAGTGGGGGCACCATTTGCGCAGGTGGGCGGTGTAGAGCGCTCCAGGCCTTGCGAGTGGCGTCCCCCCTCGAGCTGGGAGAGCCCTCTCCTG--------GGGAGCCCAGC i manLeu1.NW_012103876v1 C 0 C 0 s colAng1.NW_012117422v1 142894 467 - 815015 GGTGTGGGTGCTCCAGTTTC-GGGGAGAGGTTCAGATAATTTCAATAAAACCTGG-AAAAAGGAGCCATTATAATGCTCACCCAGCACAGTC-TTAGAGCAGGCAGAGCC---CCTGCTGTGAGGCCAGCGTTGGGAGAGCCGTGGGCCTCCTGCAGTAGCGCCTCTCTGGG-GGAGCGGGGCGAGTAGTTCCAGGAGCAGGGTGGGTAGTTCTCAGGGTCCAGGACATGTGCCACCCCGAGCCGCAGCCCCTTCTCCTACTTCTAGCCCACGGTCCCAGTACTGGGATTCCCTGACCGAATGGCACCCATCCAGCTATTCCCGGAGTCCATCTTGCCCAGGGCAGGCCAAGCCTTTAGTCTCAGGGAGCCAAGTGGGGGCACCGTTTGCGGGGGTGGGCGGTGTAGACCGCTCCAGGACTTGCGAGTGGCGTCCACTCTCGAGCTGGGAGACCCCTCTCCTG--------GGGAGCCAAGC i colAng1.NW_012117422v1 C 0 C 0 s calJac3.chr2 140355814 425 - 204313951 GATGTGGGTGCTCCAATTTCAGGGGAGAAGTTCAGATAATTTCAATAAAACCTGGAAAAAAGGAGCCCTTGTCATGCCCAC----------C-CAAAAGCAGGCAGAGCCCCTCCTGGTCTGAGGCCAGCCTT-GGAGAGCCCTGGGCCTCGTGCAGTAGCGCCTGTC---------CGGGGTGGGTGGTGCCGGAAGAGCGGTGGGTAGTTCTCAGGGTCCAGGGCACCAGCCTCCCGGAGCCACAGCCCCTTCTCCCGCTTCTAGCCCAGGGTCCCGCTTCTAG--------------------CCCATCCAGCTATTCCCCGAGTCCATCTTCCCAAGGGCAGGCCAAGCCTTGGTCCCCAGGGAACCAAGTGGGGGTACGGTTTGCAGAGGTGGGCGGTGTAGACTGCTGCGGGACTTGCAACCCCAATCCTCCCTGGAG----------------CTGGTACCACAGGGAGCCGAGC i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 24441 444 + 10068113 GGTGTGGGTGCTCCGATATCGGGGGAGAGGTTCAGATAATTTCAATAAAACCCGGAAAAAAGGAGCCGTTGTCATGCCCAC----------C-CAAAAGCAGGCAGAGCC---CCTGCTCTGAGGCCAGCCTT-GGAGAGCCCTGGGCCTCCTGCAGTAGCTCCTATCT-GG-GGATCGGGGTGGAAGGTGCCCGGAGCAGGGTGGGTAGTTCTCAGGGTCCAGGTCACAAGCC-ACCGGAGCCGCAGCCCCTTCTCCCACTTCCAGCCCAGGGTCTCGCTTCTAG--------------------CCCATCCAGCTGTTCCCCGAGTCCATCTTCCCAAGGGCAGGCCAAGCCTTGGTCCCCAGGGAACCAAGTGGGGGTACGGTTTGCGGAGGTGGGCAGTGTAGACTGCTGTGGAACTTGCAACTGCCGTCCGCCCTGGAGCTGGGAGAGCTCTCTCCTGGTACCACAGGGAGCCGAGC i saiBol1.JH378186 C 0 C 0 s aotNan1.NW_018505037v1 2581544 445 + 3417841 GGTGTGGGTGCTCCAATTTCAGGGGAGAGGTTCAGATAATTTCAATAAAACCTGGAAAAAAGGAGCCCTTGTCATGCCCAC----------C-CAAAAGCAGGCAGATCC---CCTGCTCTGAGGCCAGCCTT-GGAGAGCCCTGGGCCTCCTGCTGTAGCGCCTATCT-GG-GGAGCAGGGCGGGTGGTGCCGGGAGCAGGGTGGGTAGTTCTCAGGGTCCAGGGCACGAGCCACCCGGAGCCGCAGCCCCTTCTCCCGCTTCTAGCCCAGGTTCCCGCTTCTAG--------------------CCCATCCAGCTGTTCCCTGAGTCCATCTTCCCAAGGGCAGGCCAAGCCTTGGTCCCCAGGGAACCAGGCAGGGGTACGGTTTGCGGAGGTGAGCGGTGTAGACTGCTGCGGGACTTGGAACTGCCGTCCGCCCTGGAGCTGGGAGAGCTCTCTCCTGGTACCACGGGGAGCCGAGC i aotNan1.NW_018505037v1 C 0 C 0 e cebCap1.NW_016108322v1 83889 1160 + 99478 M a score=14898.000000 s hg38.chr5_KI270795v1_alt 122797 2 + 131892 tg s panTro5.chr5 3534502 2 - 181907262 TG i panTro5.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 100118 2 + 152767 TG i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160356992 2 - 163208435 TG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3629367 2 - 180051392 TG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3818445 2 - 181584905 TG i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3838226 2 + 4899514 TG i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012001120v1 3562436 2 - 3647740 TG i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79696658 2 + 82825804 TG i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1659997 2 - 1768974 TG i manLeu1.NW_012103876v1 C 0 C 0 s colAng1.NW_012117422v1 143361 2 - 815015 TG i colAng1.NW_012117422v1 C 0 C 0 s saiBol1.JH378186 24885 2 + 10068113 TG i saiBol1.JH378186 C 0 C 0 s aotNan1.NW_018505037v1 2581989 2 + 3417841 TG i aotNan1.NW_018505037v1 C 0 C 0 e cebCap1.NW_016108322v1 83889 1160 + 99478 M e calJac3.chr2 140356239 0 - 204313951 C a score=16423.000000 s hg38.chr5_KI270795v1_alt 122799 3 + 131892 ggt s panTro5.chr5 3534504 3 - 181907262 GGT i panTro5.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 100120 3 + 152767 GGT i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160356994 3 - 163208435 GGT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3629369 3 - 180051392 GGT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3818447 3 - 181584905 GGT i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3838228 3 + 4899514 GGT i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012001120v1 3562438 3 - 3647740 GGT i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79696660 3 + 82825804 GGT i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1659999 3 - 1768974 GGT i manLeu1.NW_012103876v1 C 0 C 0 s colAng1.NW_012117422v1 143363 3 - 815015 GGT i colAng1.NW_012117422v1 C 0 C 0 s saiBol1.JH378186 24887 3 + 10068113 GAC i saiBol1.JH378186 C 0 C 0 e cebCap1.NW_016108322v1 83889 1160 + 99478 M e calJac3.chr2 140356239 0 - 204313951 C e aotNan1.NW_018505037v1 2581991 0 + 3417841 C a score=524440.000000 s hg38.chr5_KI270795v1_alt 122802 111 + 131892 agagacgcaggacaggcagtgggccgggCTTTTCGCTTGTCCTCT--CCGATCTTGGGAGCCAGGCGCCCGTTTCTGGAAGAAAAACCAAAGCTGGACTGGGAAGGACTCTTG s panTro5.chr5 3534507 111 - 181907262 AGAGACGCGGGACAGGCAGTGGGCCGGGCTTTTCACCTGCCCTCT--CCGATCTTGGGAGCCAGGCGCCCGTTTCTGGAAGAAAAACCAAAGCCGGACTGGGAAGGACTCTTG i panTro5.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 100123 106 + 152767 AGAGACGCAGGACAGGCAGT-----GGCCTTTTCACTTGTCCTCT--CCGATCTTGGGAGCCAGGCGCCCGTTTCTGGAAGAAAAACCAAAGCTGGACTGGGAAGGACTCTTG i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160356997 111 - 163208435 AGAGACTCGGGACAGGCAGTGGGCCGGGCTTTTCACTTGTCCTCT--CCGATCTTGGGAGCCAGGCGCCCGTTTCTGGAAGAAAAACCAAAGCTGGACTGGGAGGGACTCCTG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3629372 113 - 180051392 AGAGACGCGGGACAGGCAGTGTGCCGGGCTTTTCACTTGTCCTCTGGCCGATCTTGGAGGCCAGGCGCCCGTTTCTGGAAGAAAAACCAAAGCTGGACTGGGAAGGACTCTTG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3818450 113 - 181584905 AGAGACGCGGGACAGGCAGTGTGCCGGGCTTTTCACTTGTCCTCTGGCCGATCTTGGAGGCCAGGCGCCCGTTTCTGGAAGAAAAACCAAAGCTGGACTGGGAAGGACTCTTG i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3838231 113 + 4899514 AGAGACGCGGGACAGGCAGTGTGCCGGGCCTTTCACTTGTCCTCTGGCCGATCTTGGAGGCCAGGCGCCCGTTTCTGGAAGAAAAACCAAAGCTGGACTGGGAAGGACTCTTG i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012001120v1 3562441 113 - 3647740 AGAGACGCGGAGCAGGCAGTGTGCCGGGCTTTTCACTTGTCCTCTGGCCGATCTTGGAGGCCAGGCGCCCGTTTCTGGAAGAAAAACCAAAGCTGGACTGGGAAGGACTCTTG i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79696663 113 + 82825804 AGAGACGCGGAGCAGGCAGCGTGCCGAGCTTTTCACTTGTCCTCTGGCCGATCTTGGAGGCCAGGCGCCCGTTTCTGGAAGAAAAACCAAAGCTGGACTGGGAAGGACTCTTG i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1660002 113 - 1768974 AGAGACGCAGAGCAGGCCGTGTGCCGGGCTTTTCACTTGTCCTCTGGCCGATCATGGAGGCCAGGCGCCCGTTTCTGGAAGAAAAACCAAAGCTGGACTGGGAAGGACTCTTG i manLeu1.NW_012103876v1 C 0 C 0 s colAng1.NW_012117422v1 143366 113 - 815015 AGAGACGCGGGACAGGCAGTGTGCCGGGCTTTTCACTTGTCCTCTGGCAGATCTTGGAGGCCAGGCGCCTGTTTCTGGAAGAAAAACCAAAGCTGGACTGGGAAGGACTCTTG i colAng1.NW_012117422v1 C 0 C 0 e cebCap1.NW_016108322v1 83889 1160 + 99478 M e saiBol1.JH378186 24890 0 + 10068113 C e calJac3.chr2 140356239 0 - 204313951 C e aotNan1.NW_018505037v1 2581991 0 + 3417841 C a score=11165.000000 s hg38.chr5_KI270795v1_alt 122913 2 + 131892 TG s panTro5.chr5 3534618 2 - 181907262 TG i panTro5.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 100229 2 + 152767 TG i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160357108 2 - 163208435 TG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3629485 2 - 180051392 TG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3818563 2 - 181584905 TG i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3838344 2 + 4899514 TG i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012001120v1 3562554 2 - 3647740 TG i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79696776 2 + 82825804 TG i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1660115 2 - 1768974 TG i manLeu1.NW_012103876v1 C 0 C 0 s colAng1.NW_012117422v1 143479 2 - 815015 TA i colAng1.NW_012117422v1 C 0 C 0 s calJac3.chr2 140356239 2 - 204313951 TG i calJac3.chr2 C 0 C 0 e cebCap1.NW_016108322v1 83889 1160 + 99478 M e saiBol1.JH378186 24890 0 + 10068113 C e aotNan1.NW_018505037v1 2581991 0 + 3417841 C a score=22698.000000 s hg38.chr5_KI270795v1_alt 122915 3 + 131892 GAG s panTro5.chr5 3534620 3 - 181907262 GAG i panTro5.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 100231 3 + 152767 GAG i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160357110 3 - 163208435 GAG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3629487 3 - 180051392 GAG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3818565 3 - 181584905 GAG i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3838346 3 + 4899514 GAG i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012001120v1 3562556 3 - 3647740 GAG i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79696778 3 + 82825804 GAG i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1660117 3 - 1768974 GAG i manLeu1.NW_012103876v1 C 0 C 0 s colAng1.NW_012117422v1 143481 3 - 815015 GAG i colAng1.NW_012117422v1 C 0 C 0 s calJac3.chr2 140356241 3 - 204313951 GAG i calJac3.chr2 C 0 C 0 s aotNan1.NW_018505037v1 2581991 3 + 3417841 GAG i aotNan1.NW_018505037v1 C 0 C 0 e cebCap1.NW_016108322v1 83889 1160 + 99478 M e saiBol1.JH378186 24890 0 + 10068113 C a score=756793.000000 s hg38.chr5_KI270795v1_alt 122918 105 + 131892 ACCCGGACGTCAGGCGTGGCGCGTTGGGGAAGCAGCTCCACGGGGACCCAGGAGGCGCCGGCCGGGTTGAGCCGGGTTGGTTCCGACCCAAGAGAGCTCGTCCCA s panTro5.chr5 3534623 105 - 181907262 ACCCGGACGTCAGGCGTGGCGCGTTGGGGAAGCAGCTCCCCGGGGACCCAGGAGGCGCCGGCCGGGTTGAGCCGGGTTGGTTCCGACCCAAGAGAGCTCGTCCCA i panTro5.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 100234 104 + 152767 ACCCGGACGTCAGGCGTGGCACGTTGGGGAAGCAGCTCCCCGGGGGCCCAGGAGGCGCCGGCCGGATTGAGCCGGGTTGGTT-CGACCCAAGAGAGCTCATCCCA i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160357113 105 - 163208435 ACCCGGACGTCAGGCGTGGCGCGTTGGGGAGGCAGCTCCCCGGGGACCGAGGAGGCGCCAGTCGGGTTGAGCCGGGTTGGCTCCGACCCCAGGGAGCTCGTCCCA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3629490 105 - 180051392 ACCCGGACGTCAGGCGTGGCGCGCTGGGGAAGCAGCTCCCCGGGGACCCAGGAGGCGCCGGCCGGGTTGAGCCGGGCTGACCCCGACCCAAGAGAGCTCGTCTCA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3818568 105 - 181584905 ACCCGGACGTCAGGCGTGGCGCGCTGGGGAAGCAGCTCCCCGGGGACCCAGGAGGCGCCGGCCGGGTTGAGCCGGGCTGACCCCGACCCAAGAGAGCTCGTCTCA i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3838349 105 + 4899514 ACCCGGACGTCAGGCGTGGCGCGCTGGGGAAGCAGCTCCCCGGGGACCCGGGAGGCGCCGGCCGGGTTGAGCCGGGCTGACCCCGACCCAAGAGAGCTCGTCTCA i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012001120v1 3562559 103 - 3647740 ACCCGGACGTCAGGCGTG--GCGCCGGGGAAGCAGCTCCCCGGGGACCCGGGAGGCGCCGGCCGGGTTGAGCCGTGCTGGCTCCGACCCCAGAGAGCTCGTCTCA i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79696781 105 + 82825804 ACCCGGACGTCAGGCGTGGCGCGCTGGGGAAGCAGCTCCCCGGGGACCCAGGAGGCGCCGGCCGGGTTGAGCCGGGCTGGCTCCGACCCAAGAGAGCTCTTCTCA i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1660120 103 - 1768974 ACCCGGACGTCAGGCGTG--GCGCTGGGGAAGCAGCTCCCCGGGGACCCGGGAGGCGCCGGCCGGGTTGAGCCGGGCTGGCTCCGACCCAAGAGAGCTCGTCTCA i manLeu1.NW_012103876v1 C 0 C 0 s colAng1.NW_012117422v1 143484 105 - 815015 ACCCGGACGTCAGGCGTGGCGCGCTGGGGAAGCAGCTCCCCGGGGACCCAAGAGGCTCCGGCAGGGTTGAGCCGGGCCGGCTCCGACCCAAGAGAGCTCGTCTCA i colAng1.NW_012117422v1 C 0 C 0 s calJac3.chr2 140356244 104 - 204313951 ACCCGGACGTCAGACGTGGCGCATTGGGGAAGCAGCTCCCCGGACACCCGGGAGGCGCAGGC-GGGTAGAGCCGGGCTAGCTCCGACCCAGGAGAGCTCGTCCCA i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 24890 102 + 10068113 ACCTGGGCGTCAGACGTGGCGCGTTGGGGAAGCATCTCCCCGGAGACCCAGGAGGCACCGGC---TTAGAGCCGGGCTAGCTCTGGCCCAGGAGAGCTCGTCTCA i saiBol1.JH378186 C 0 I 5 s aotNan1.NW_018505037v1 2581994 104 + 3417841 ACCCGGACGTCACACGTGGCGCGTTGGGGAAGCAGCTCCTGGGAGAGCCGGGAGGCGCCGGC-GGGTAGAGCCGGGCTAGCTCCGACCCGGGAGAGCTCGTCCCA i aotNan1.NW_018505037v1 C 0 I 5 e cebCap1.NW_016108322v1 83889 1160 + 99478 M a score=118225.000000 s hg38.chr5_KI270795v1_alt 123023 29 + 131892 CGACGGAGCAGGTCCCTTTGCATCCCGTG s panTro5.chr5 3534728 29 - 181907262 CGACGGAGCAGGTCCCTTTGCATCCCGCC i panTro5.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 100338 29 + 152767 CGACGGAGCAGGTCCCTTTGCATCCCGCG i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160357218 29 - 163208435 CGAAGGAGCAGGTCCCTTTGCATCCCGCG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3629595 28 - 180051392 CGAC-GAGCAGGTCCCTTTGCATCACGCG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3818673 28 - 181584905 CGAC-GAGCAGGTCCCTTTGCATCACGCG i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3838454 28 + 4899514 CGAC-GAGCAGGTCCCTTTGCATCACGCG i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012001120v1 3562662 28 - 3647740 CGAC-GAGCAGGTCCCTTTGCATCACGCG i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79696886 28 + 82825804 CGAC-GAGCAGGTCCCTTTGCATCACGCG i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1660223 28 - 1768974 CGAC-GAGCAGGTCCCTTTGCATCACGCG i manLeu1.NW_012103876v1 C 0 C 0 s colAng1.NW_012117422v1 143589 29 - 815015 CGACGGAGCAGGTCCCTTTGCATCACGCG i colAng1.NW_012117422v1 C 0 C 0 s calJac3.chr2 140356348 6 - 204313951 -----------------------GCCGCG i calJac3.chr2 C 0 C 0 e cebCap1.NW_016108322v1 83889 1160 + 99478 M e saiBol1.JH378186 24992 5 + 10068113 I e aotNan1.NW_018505037v1 2582098 5 + 3417841 I a score=1520164.000000 s hg38.chr5_KI270795v1_alt 123052 213 + 131892 GGGCCGCCAGGTGCAA-TTTTCGCTGGGCCGACGGCGCGGAGATGGGCCAGAGTCCGGCCATCCAGAAGTGCCTGGAGCGCACAGCAAGGCCCTGCCCTC-GGCTCCGTGAAGGTGAGGGGG---TAAAGTCGGCCCGGAGTCCCCGGGGGTGCAGGAGGGGCC---CCGCGGGTTCCAGC---AGACCCTCGACGGAACGTTCCAGGCAGGCGAGATCTCGCA s panTro5.chr5 3534757 213 - 181907262 GGGCTGCCAGGTGCAA-TTTTCGCTGGGCCGACGGCGCGGAGATGGGCCAGAGTCCGGCCATCCAGAAGTGCCTGGAGCACACAGCAAGGCCCTGCTCTC-GGCTCCGTGAAGGTGAGGGGG---TAAAGTCGGCCCGGAGTCCCCTGGGGTGCAGGAGGGGCC---CCGCGGGTACCAGC---AGACCCTCGACGGAACGTTCCAGGCAGGCGAGATCTCGCA i panTro5.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 100367 214 + 152767 GGGCTGCCAGGTGCAATTTTTCGCTGGGCCGACGGCGCGGAGATGGGCCAGAGTCCGGCCATCCAGAAGTGCCTGGAGCATACAGCAAGGCCCTGCCCTC-GGCTCCGTGAAGGTGAGGGGG---TAAAGTCGGCCCGGAGTCCCCTGGGGTGCAGGAGGGGCC---CCGCGGGTTCCCGC---AGACCCTCGACGGAACGTTCCAGGCAGGCGAGATCTCGCA i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160357247 212 - 163208435 GGGCTGCCGGGTGCAA-TTTTCGCTGGGCCGACGGCGCGGAGATGGGCCAGAGTCCGGCCATCCAGAAGTGCCTGGAGCACACAGCAAGGCCCTGCCCTC-GGCTCCGTGAAGGTGAGGGGG---TCAAGTCGG-CCGGAGTCCCCTGGGGTGCAAGAGGGGCC---CCGCGGGTTTCAGG---GGACCCTCGACGGAACGTTCCAGGCAGGCGAGATCTCGCA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3629623 212 - 180051392 GGGCTGCCAGGCGCAG-CTTTCACTGGGCCGACGGTGCGGAGATGGGCCAGAGTCCTG-GGCTCATAAATGCCTGGAGCACACAGCAAGGCGCTGCCCTC-GGCTCCGTGAAGGTGAGGGGG---TAAAGCCGGCCCGGAGTCCCCTGGGGTGCAGGAGGGACC---CCGCGGGTTGCAGC---GGACCCTCGACGGAACGTTCCAGGCAGGCGAGATCTCGCA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3818701 212 - 181584905 GGGCTGCCAGGCGCAG-CTTTCACTGGGCCGACGGTGCGGAGATGGGCCAGAGTCCTG-GGCTCATAAATGCCTGGAGCACACAGCAAGGCGCTGCCCTC-GGCTCCGTGAAGGTGAGGGGG---TAAAGCCGGCCCGGAGTCCCCTGGGGTGCAGGAGGGACC---CCGCGGGTTGCAGC---GGACCCTCGACGGAACGTTCCAGGCAGGCGAGATCTCGCA i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3838482 212 + 4899514 GGGCTGCCAGGCGCAG-CTTTCACTGGGCCGACGGTGCGGAGATGGGCCAGAGTCCTG-GGCTCATAAATGCCTGGAGCACACAGCAAGGCGCTGCCCTC-GGCTTCGTGAAGGTGAGGGGG---TAAAGCCGGCCCGGAGTCCCCTGGGGTGCAGGAGGGACC---CCGCGGGTTGCAGC---GGACCCTCGACGGAACGTTCCAGGCAGGCGAGATCTCGCA i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012001120v1 3562690 211 - 3647740 GGGCTGCCAGGCGCAG-CTTTCACTGGGCCGACGGTGCGGAGATGGGCCAGAGTCCTG-GGCTCATAAATGCCTGGAGCACACAGCAAGGCGCTGCCCTC-GGCTCCGTGAAGGTGA-GGGG---TAAAGCCGGCCCGGAGTCCCCTGGGGTGCAGGAGGGACC---CCGCGGGTTGCAGC---GGACCCTCGACGGAACGTTCCAGGCAGGCGAGATCTCGCA i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79696914 211 + 82825804 GGGCTGCCAGGCGCAG-TTTTCACTGGGCCGACGGTGCGGAGATGGGCCAGAGTCCTG-GGCTCATAAATGCCTGGAGCACACAGCAAGGCGCTGCCCTC-GGCTCCGTGAAGGTGA-GGGG---TAAAGCCGGCCCGGAGTCCCGTGGGGTGCAGGAGGGACC---CCGCGGGTTGCAGC---GGACCCTCGACGGAACGTTCCAGGCAGGCGAGATCTCGCA i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1660251 211 - 1768974 GGGCTGCCAGGCGCAG-CTTTCACTGGGCCGACGGTGCGGAGATGGGCCAGAGTCCTG-GGCTCATAAATGCCTGGAGCGCACAGCAAGGCGCTGCCCTC-GGCTCCGTGAAGGTGA-GGGG---TAAAGACGGCCCGGAGTCCCCTGGGGTGCAGGAGGGACC---CCGCGGGTTGCAGC---GGACCCTCGACGGAACGTTCCAGGCAGGCGAGATCTCGCA i manLeu1.NW_012103876v1 C 0 C 0 s colAng1.NW_012117422v1 143618 215 - 815015 GGGCTGCCAGGTGCAG-TTTTCACTGGGCCGACGGTGCGGAGATGGGCCAGAGTCCTG-GACCCATAAATCCCTGGAGCACACAGCAAGGCGCTGCCCTG-GGCTCCGTGAAGGTGAGGGGG---TAAAGCCGGCCCCGAGTCCCCCGGGGTGCAGGAGGGATCCCGCCGCGAGTTCCAGC---GGACCCTCGACAGAACGTTCCAGGCAGGCAAGATCTCGCA i colAng1.NW_012117422v1 C 0 C 0 s calJac3.chr2 140356354 212 - 204313951 -GGCTACCAAGTGCAG-TTTTCATTCGGCGGACAGCGCGGAGATGGGCCGGAGTCCGG-GACCGAGAAGTGCCTGGAGCACACAGCAAGGCGCTGCCCTC-GGCTCCGTGAAGATGAGAGGG---TAAAGCCGGCCCGGTGTCTCCTGAGGTGCAGGAGGGACC---CCGCGGGTTCCAGCC--GGACCCTCGACGGAACGTTCCAGGCAAGGGAGGTCTTGTA i calJac3.chr2 C 0 I 332 s saiBol1.JH378186 24997 214 + 10068113 GGGCTGCCAGGTG--G-TTTTCATTGGGCCGAGGGCGCGGAGATGGGCCGGAGTACGG-GACCGAGAAGTGCCTGGAGCACACAGCAAGGCGCTGCCCTC-GGCTCCGTGGAGATGAGCGGGTAATAAAGCCGGCCCGGTGTCTCCTGGGTTGCAGGAGGGGCT---CCGCGGGTTCCAGCC--GGACCCTCGACGGAACGTTCCAGGCAAGCGAGGTCTTGCA i saiBol1.JH378186 I 5 C 0 s aotNan1.NW_018505037v1 2582103 213 + 3417841 GGGCTGCCAGGTGCAG-TTTTCACTGGGCCGACGGCGCGGAGATGGGCCGGAGTCCGG-GACCGAGAAGTGCCTGGAGCACACCGCAAGGCGCTGCCCTCGGGCTCCGTGAGGATGAGCGGG---TAAAGCCGGCCCGGTGTCTCCTGGGGTGCAGGAGGGGCC---CCGCGGGTT---GCCTGGAACCCTCGAAGGAACGTTCCAGGTAAGCGAGGTCTTGCA i aotNan1.NW_018505037v1 I 5 C 0 e cebCap1.NW_016108322v1 83889 1160 + 99478 M a score=148188.000000 s hg38.chr5_KI270795v1_alt 123265 25 + 131892 CAGAATCTGCCCTTTTAAAGGCTCG s panTro5.chr5 3534970 25 - 181907262 CAGAATCCGCCCTTTTAAAGGCTCG i panTro5.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 100581 25 + 152767 CAGAATCTGCCCTTTTAAAGGCTCG i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160357459 25 - 163208435 CACAGTCTGGCCTTTGAAAGGCTCG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3629835 25 - 180051392 CAGAATGTGCCCTTTTGAAGGCTCT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3818913 25 - 181584905 CAGAATGTGCCCTTTTGAAGGCTCT i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3838694 25 + 4899514 CAGAATGTGCCCTTTTGAAGGCTCT i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012001120v1 3562901 25 - 3647740 CAGAATGTGCCCTATTGAAGGCTCT i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79697125 25 + 82825804 CAGAATGTGCCCTTTTGAAGGCTCT i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1660462 25 - 1768974 CAGAATGTGCCCTTTTGAAGGCTCT i manLeu1.NW_012103876v1 C 0 C 0 s colAng1.NW_012117422v1 143833 25 - 815015 CGGAATGTGCCCTTTTGAAGGCTCT i colAng1.NW_012117422v1 C 0 I 313 s calJac3.chr2 140356898 25 - 204313951 cAGAAGCTGCCTATTTTAAGGTTCC i calJac3.chr2 I 332 C 0 s saiBol1.JH378186 25211 25 + 10068113 CAGAAGCTGCCTATTTTAAGGCTCC i saiBol1.JH378186 C 0 C 0 s aotNan1.NW_018505037v1 2582316 25 + 3417841 CAGAAGCTGCCTATTTTAAGGCTCC i aotNan1.NW_018505037v1 C 0 C 0 e cebCap1.NW_016108322v1 83889 1160 + 99478 M a score=3134042.000000 s hg38.chr5_KI270795v1_alt 123290 447 + 131892 GCTTTGTCCTCGTTAAACTTGCGTCTGGCAACGCGACCGCTGCGGCTCCCGAGCAAGATTAGAGGGTTTCCGCTCGCAGGGGCGCGCCCGGGGACCGCGCCTCCCCGCCTGGTCTCGGCGCCCCGGCCCA-GGG---GTCTTCAGTGGTGAGGGGCGCCCAGATCGCTGCATCCCCTGGAGCTCTGCGCCCGGCCGAGCCACTCAGAGCTCCCGCCCCGCACACCCACTTCGAGCTCCAAGTCCTTCCTTTTCTATACTCCAAGTTGGATCCTGCTGGGAAGGAAGGGCCCTTCCTGAGAGACCAGGGATTGCGATTTCCCAGCACAAAGTCGAATTCATGACTTCAGCTTCAACGGGGCTGCATTCTCCCCTTGGCAGGAATGGGATGGAGCGAGGGTGAAGCTGCTGGAAAGACACTCGTTTTATTTTTTTAATCGTAAACGGGGCA---AC s panTro5.chr5 3534995 447 - 181907262 GCTTGGTCCTCGTTAAACTTGCGTCTGGCAACGCGACCGCTGCGGCTCCCGAGCAAGATTAGAGGGTTTCCGTTCGCAGGGGCGCGCCCGGGGACCGCGCCTCCCCGCCTGGTCTCGGCGCCCCGGCCCG-GGG---GTCTTCAGTGGTGAGGGGCGCCCAGATCGCTGCATCCCCTGGAGCTCTGCGCCCGGCCCAGCCACTCAGAGCTCCCGCCCCGCACACCCACTTCGAGCTCCAAGTCCTTCCTTTTCTATGCTCCAAGTTGGATCCTGCGGGGAAGGAAGGGCCCTTCCTGAGAGACCAGGGATTGCGATTTCCCAGCACAAAGTCGAATTCATGACTTCAGCTTCAACGGGGCTGCATTCTCCCCTTGGCAGGAATGGGATGGAGCGAGGGTGAAGCTGCTGGAAGGACACTCGTTTTATTTTTTTAATCGTAAACGGGGCA---AC i panTro5.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 100606 447 + 152767 GCTTTGTCCTCGTTAAACTTGCGTCTGGCAACGCGACCGCTGCGGCTCCCGAGCAAGATTAGAGGGTTTCCGCTCGCAGGGGCGCGCCCGGGGACCGCGCCTCCCCGCCTGGTCTCGGCGCCCCGGCCCA-GGG---GTCTTCAGTGGTGAGGGGCGCCCAGATCGCTGCATCCCCTGGAGCTCTGCGCCCGGCCGAGCCACTCAGAGCTCCCGCCCCGCACACCCACTTCGAGCTCCAAGTCTTTCCTTTTCTATACTCCAAGTTGGATCCTGCTGGGAAGGAAGGGCCCTTCCTGAGAGACCAGGGATTGCGATTTCCCAGCACAAAGTCGAATTCATGACTTCACCTTCAACGGGGCTGCATTCTCCCCTTGGCAGGAATGGGATGGAGCCAGGGTGAAGCTGCTGGAAGGACACTCGTTTTATTTTTTTCATCGTAAACGGGGCA---AC i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160357484 447 - 163208435 GTTTTGTCCTCGCTAAACTTGCGTCTGGCAACGCGACCGCTGCGGCTCCCGAGCAAGATTAGAGGGTTTCCGCTCGCAGGGGCGCGCCCGGGGACCGCACCTCCCCGCCTGGTCTCGGCGCCCCGGCCCA-GGG---GTCTTCAGTGGTGAGGGGTGCCCAGATCGCTGCATCCCCTGGAGCTCTGCGCCCGGCCAGGCCACTCGGAGCTCCCGCCCCGCACACCCACTTCGAGCTCCAAGTCCTTCCTTTTCTATACTCCAAGTTGGATCCTGCTGGGCAGGAAGGGCCCTTCCTGAGAGACCGGGGATTGCGATTTCCCAGCACAAAGTCAAATTCATGACTTCACCTTCAACGGGGCTGCATTCTCCCTTTGGCAGGAATGGGATGGAGCGAGGGTGAAGCTGCTGGAAGGACACTCGTTTTATTTTTTTAATCGTAAAAGGGGCA---AC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3629860 445 - 180051392 GCTTTGTCCTTGTTAAACTTGCGTCTGACAACGCGACTGCTGCGGCTCCGGAGCAAGACT--GGAGTTTCCGCTCGCAGGGGCGCGCCCAGGGACCGCGCCTCCCCGCCGGGTCTCAGCGCCCTGGCCCA-GGGCTCGTCTTCAATGGTGAGGGGCGCCCAGGTCGCTGCATCCCCTGGAGCTGTGCGCCCGGCCAAGCCACCCGGAGCTCCCGCCCCGCACACCCAC-TCGAGCTCCGAGTCCTTCCTTTTCTAAACTCGAAGTTGGATGCTGCTG----GGAAGGCCCCTTCCTGAAAGACCAGGGATTGCGATTTCCCAGCACAAAGTCGAATTCATGACTTCACCTTCAACCGGGCTGCATTCTCCCCTTGGCGAGAATGGGATGGAGCGAGGGTGGAGCTGCTGGAAGGACACTCGTGTTATTCTTTCAATCGCGAA-GGGGCAACCAC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3818938 445 - 181584905 GCTTTGTCCTTGTTAAACTTGCGTCTGGCAACGCGACTGCCGCGGCTCCGGAGCAAGACT--GGAGTTTCCGCTCGCAGGGGCGCGCCCAGGGACCGCGCCTCCCCGCCGGGTCTCAGCGCCCTGGCCCA-GGGCTCGTCTTCAGTGGTGAGGGGCGCCCAGGTCGCTGCATCCCCTGGAGCTGTGCGCCCGGCCTAGCCACCCGGAGCTCCCGCCCCGCACACCCAC-TCGAGCTCCGAGTCCTTCCTTTTCTAAACTCGAAGTTGGATGCTGCTG----GGAAGGCCCCTTCCTGAAAGACCAGGGATTGCGATTTCCCAGCACAAAGTCGAATTCATGACTTCACCTTCAACCGGGCTGCATTCTCCCCTTGGCGAGAATGGGATGGAGCGAGGGTGGAGCTGCTGGAAGGACACTCGTGTTATTCTTTCAATCGCGAA-GGGGCAACCAC i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3838719 445 + 4899514 GCTTTGTCCTTGTTAAACTTGCGTCTGGCAACGCGACTGCCGCGGCTCCGGAGCAAGACT--GGAGTTTCCGCTCGCAGGGGCGCGCCCAGGGACCGCGCCTCCCCGCCGGGTCTCAGCGCCCGGGCCCA-GGGCTCGTCTTCAGTGGTGAGGGGCGCCCAGGTCGCTGCATCCCCTGGAGCTGTGCGCCCGGCCAAGCCACCCGGAGCTCCCGCCCCGCACACCCAC-TCGAGCTCCGAGTCCTTCCTTTTCTAAACTCGAAGTTGGATGCTGCTG----GGAAGGCCCCTTCCTCAAAGACCAGGGATTGCGATTTCCCAGCACAAAGTCGAATTCATGACTTCACCTTCAACCGGGCTGCATTCTCCCCTTGGCGAGAATGGGATGGAGCGAGGGTGGAGCTGCTGGAAGGACACTCGTGTTATTCTTTCAATCGCGAA-GGGGCAACCAC i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012001120v1 3562926 446 - 3647740 GCTTTGTCCTTGTTAAACTTGCGTCTGGCAACGCGACTGCCGCGGCTCCGGAGCAAGACT--GGAGTTTCCGCTCGCAGGGGCGCGCCCGGGGACCGCGCCTCCCCGCCGGGTCTCAGCGCCCTGGCCCA-GGGCTCGTCTTCAGTGGTGAGGGGCGCCCAGGTCGCTGCATCCCCTGGAGCTGTGCGCCCGGCCAAGCCACCCGGAGCTCCCGCCCCGCACACCCACTTCCAGCTCCAAGTCCTTCCTTTCCTAAACTCGAAGTTGGATCCTGCTG----GGAAGGCCCCTTCCTGAAAGACCAGGGATTGCGATTTCCCAGCACAAAGTCGAATTCATGACTTCACCTTCAACCGGGCTGCATTCTTCCCTTGGCGAGAATGGGGTGGAGCGAGGGTGGAGCTGCTGGAAGGACACTCGTGTTATTCTTTTAATCGCGAA-GGGGCAACCAC i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79697150 445 + 82825804 GCTTTGTCCTTGTTAAACTTGCGTCTGGCAGCGCGACTGCCGCGGCTCCGGAGCAAGATT--AGAGTTTCCGCTCGCAGGGGCGCGCCCGGGGACCGCGCCTCCCCGCCCGGTCTCAGCGCCGTGGCCCA-GGGCTCGTCTTCAGTGGTGAGGGGCGCCCAGATCGCTGCATCCCCTGGAGCTGTGCGCCCGGCCAAGCCACCCAGAGCTCCCGCCCCGCACACCCAC-TCGAGCGCCAAGTCCTTCCTTTTCCAAACTCGAAGTTGGATCCTGCTG----GGAAGGCCCCTTCCTGAAAGACTGGGGATTGCGATTTCCCAGCACAAAGTCGAATTCATGACTTCACCTTCAACCGGGCTGCATTCTCCCCTTGGCAAGAATGGGATGGAGCGAGGGTGGAGCTGCTGGAAGGACACTCGTGTTATTCTTTCCATCGCGAA-GGGGCAACCAC i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1660487 446 - 1768974 GCTTTGTCCTTGTTAAACTTGCGTCTGGCAGCGCGACTGCCGCGGCTCGGGAGCAAGATT--AGAGTTTCCGCTCGCAGGGGCGCGCCCGGGGACCGCGCCTCCCCGCCGGGTCTCAGCGCCCTGGCCCA-GGGCTCGTCTTCAGTGGTGAGGGGCGCCCAGGTCGCTGCATCCCCTGGAGCTGTGCGCCCGGCCAAGCCACCCAGAGCTCCCGCCGCGCACACCCACTTCCAGCTCCAAGTCCTTCCTTTCCTAAACTCGAAGTTGGATCCTGCTG----GGAAGGCCCCTTCCTGAAAGACCAGGGATTGCGATTTCCCAGCACAAAGTCGAATTCATGACTTCACCTTCAACCGGGCTGCATTCTCCCCTTGGCGAGAATGGGATGGAGCGAGGGTGGAGCTGCTGGAAGGACACTCGTGTTATTCTTTTAATCGCGAA-GGGGCAACCAC i manLeu1.NW_012103876v1 C 0 C 0 s colAng1.NW_012117422v1 144171 449 - 815015 GCTTTGTCCTTGTTAAACTTGCGTCTGGCAACGCGACTGCCGTGGCTCCGGGGCAAGATTAGAGAGTTTCCGCTCGCAGGGGTGCGCCCAGGGACCGCGCCTCCCCGCCCGGTCTCAGCGCCCTGGCCCA-GGGCTCCTCTTCAGTGGTGAGGGTCGCCCAGGTTGCTGCATCCCCTGGAGCTGCACGCCCGGCCAAGCCACGCAGAGCTCCCGCCCCGCACACGCACTTCGAGCTCCAAGTCCTTCCTTTTCTAAACTCGAAGTTGGATCCTGCTG----GGAAGGACCCTTCCTGAAAGACCAGGGATTGTGATTTCCCAGCACAAAGTCCAATTCATGACTTAGCCTTCAACCGGGCTGCATTCTCCCCTTGGCAAGAATGGGATGGAGCGAGGGTGGAACTGCTGGAAGGACACTCGTTTTATTCTTTTAATCGCGAATGGGGCAACCAC i colAng1.NW_012117422v1 I 313 C 0 s calJac3.chr2 140356923 438 - 204313951 GCTTTGCCCTCGTTAAACTTGTGTCTGGCAAGGCGACCGCTGCGGCTCCGGAGCAAGATGAGAGGGTTTTTGCCCTCAGGAGCGCG-CAGGGGACCGCGTCTCCCCGCCAGGTCTCCGCGCCCCAGTCCA-GGG---GTCTTCAGTGGTGAGGGGCGCCCAGATCGCTGCATCCCCGGGAGCTGTGCTCCCGGCCAGGCCACTCAGAGCTCCTGCCCCGCACAACCACTTCCAGCTCCAAGTCCTCCCTTTTCTAAA---CAAGTTGGATCCTGCTG----GGAAAAGCCCTAACTGAAACAACCGGGATTGCGATTTCCCAGCGCAAAGTCGAATTCATGACTTCACCTTCAACCGAGATGCATTCTCCCCTTGGCAGGAATGGGATGGAGCGAGGGTGGAGCTGCTTGAAGGAGAGTCCTTTTA-TTTTTTAATCGCAAATGGGGCA---AC i calJac3.chr2 C 0 I 3 s saiBol1.JH378186 25236 419 + 10068113 GCTTTGCCCTCGTGAAACGTACATCTGGCAACGCG--------------------AGATGAGAGGGTTTCTGCCCGCAGGGTCGCG-CAGGGGACCGCGTCTCCCCGCCAGGTCTCCACGCCCCAGTCCA-GGG---GTCTTCGGTGGTGAGGGGCACCCAGATCGCTGCATCCCCTGGACCTGTGCCCTCGGCCAGACCACTCAGAGCCCCTGCCCCGCACACCCACTTCCAGCTCCAAGTCTTTCCTTTTCTAAACTCCAAGTTGGATCCTGCTG----GGAAAGGCCCTAACTGCAACACCCGGGATTGCGATTTCCCAGCGCAAAGTCGATTTCATGACTTCACCTTCAACCGAGCTGCGTTCTCCCCTTGGCAGGAATGGGATGGAGCGAGGGTGGAGCTGCTT---GGAGAGTCGTTTTATTTTTTTAATCGCAAATGGGGCA---AC i saiBol1.JH378186 C 0 I 3 s aotNan1.NW_018505037v1 2582341 443 + 3417841 GCTTTGCCCTCGTTAAACGTGTGTCTGGCAACGCGACCGCCTCGGCTCCCGAGCAAGATGAGAGGGTTTCTGCCCGCAGGGGCGCG-CAGGGGACCGCGTCTCCCCGCCAGGTCTCCGCGCCCCAGTCCAGGGG---GTCTTCAGTGGTGAGGGGCGCCCAGATCGCTGCATCCCCCGGAGCTGTGCGACCAGCCAGGCCACTCAGAGCTCCTGCCCCGCACACCCACTTCCAGCTTCAAGTCCTTCCTTTTCTCAACTCCAAGTTGGATCCTGCTG----GGAAAGGCCCTACCTGAAACACCCGGGATTGCGATTTCCCAGCGCAAAGTCGAATTCATGACTTCACCTTCAACCGAGCTGCATTCTCCCCTTGGCAGGAACGGGATGGAGCGAGGGTGGAGCTGCTTGAAGGGGAGTCGTTTTATGTTTTTAATCGCAAATGGGGCA---AC i aotNan1.NW_018505037v1 C 0 I 352 e cebCap1.NW_016108322v1 83889 1160 + 99478 M a score=149221.000000 s hg38.chr5_KI270795v1_alt 123737 26 + 131892 TTCCAA--CTCTGCCAGTTTTAAGCTTC s panTro5.chr5 3535442 26 - 181907262 TTCCAA--CTCTGCCAGTTTTAAGCTTT i panTro5.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 101053 26 + 152767 TTCCAA--CTCTGCCAGTTTTAGGCTTC i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160357931 26 - 163208435 TTCCAA--CTCTGCCAGTTTTAAGCTTT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3630305 28 - 180051392 TTCTAACCCTCCGCCAGTTTTAAGCTTT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3819383 28 - 181584905 TTCTAACCCTCCGCCAGTTTTAAGCTTT i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3839164 28 + 4899514 TTCTAACCCTCCGCCAAGTTTTAGCTTT i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012001120v1 3563372 28 - 3647740 TTCTAACACTCCGCCAGTTTTAAGCTTT i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79697595 28 + 82825804 TTCTAACCCTCTGCCAGTTTTAAGCTTT i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1660933 28 - 1768974 TTCTAACCCTCCGCCAGTTTTAAGCTTT i manLeu1.NW_012103876v1 C 0 C 0 s colAng1.NW_012117422v1 144620 28 - 815015 TTCTAACCCTCTGCCAGTTTTAAGCCTC i colAng1.NW_012117422v1 C 0 C 0 s calJac3.chr2 140357364 28 - 204313951 TTCCAACCCTCTACCGGTTTTAAGCTTT i calJac3.chr2 I 3 C 0 s saiBol1.JH378186 25658 28 + 10068113 TTCGAACCCTCTACCAGTTTTAAACTTT i saiBol1.JH378186 I 3 C 0 e cebCap1.NW_016108322v1 83889 1160 + 99478 M e aotNan1.NW_018505037v1 2582784 352 + 3417841 I a score=103635.000000 s hg38.chr5_KI270795v1_alt 123763 24 + 131892 TAGAGTATCTCCTCggcggagcgc s panTro5.chr5 3535468 24 - 181907262 AAGAGTATCTCCTCGGCGGAACGC i panTro5.chr5 C 0 T 98031 s gorGor5.CYUI01000356v1 101079 24 + 152767 AAGAGTATCTCCTCggcggaacgc i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160357957 24 - 163208435 AAGAGTATCTCCTCggcggaacgc i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3630333 24 - 180051392 AAGGGTCTCTCCTCggccgaacgc i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3819411 24 - 181584905 AAGAGTCTCTCCTCggccgaacgc i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3839192 23 + 4899514 AAGAGTCTCTCCTCggccg-acgc i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012001120v1 3563400 24 - 3647740 AAGAGTCTCTCCTCggccgaacgc i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79697623 24 + 82825804 AAGAGTCTCTCCTCggccgaacgc i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1660961 24 - 1768974 AAGAGTCTCTCCTCggccgaatgc i manLeu1.NW_012103876v1 C 0 C 0 s colAng1.NW_012117422v1 144648 24 - 815015 AAGAGTATCTCCTCggccgaacgc i colAng1.NW_012117422v1 C 0 C 0 e cebCap1.NW_016108322v1 83889 1160 + 99478 M e saiBol1.JH378186 25686 0 + 10068113 C e calJac3.chr2 140357392 0 - 204313951 C e aotNan1.NW_018505037v1 2582784 352 + 3417841 I a score=1182763.000000 s hg38.chr5_KI270795v1_alt 123787 283 + 131892 ggtggctcacgcctgtagtcccaacacttt-gggaggccgaggcgggcggatca---cgaggtcaggagatcgagaccatcctggctaacacggtgaaactcagtttctactgaaaatac-aacaaattagccgggcgcggtggcgggcgcctgtagtcccagctactccggaggctgaggcaggagaatggcgtgaacccgggaggcggagcttgcagtgagcccagatcgcgcccctg-cactccagcctgggggacagagcgagactccgtctcaaaacaac-agaa s panTro5.chr5 3437461 285 - 181907262 ggtggctcatgcctgtaatcccagcacgtt-gggaggctgaggtgggtgaatcaacctgaggtcaggcgtttgagaccagcctggccaacatggtgaaaccccatctctacggaaaatac-aa-aaattagccgggtgtggtggtggatgcctgtaatcgcagttattcaggaggccgaggcaggagaattgcttaaccccgggaggcggagcttgcagtgagccgagatcgcgccactg-cactccagcctgggcgacagagcgagactccgtctcaaaacaac-aaaa i panTro5.chr5 T 98031 C 0 s gorGor5.CYUI01000356v1 101103 283 + 152767 ggtggctcacgcctgtagtcccagcacttt-gggaggctgaggcgggcggatca---cgaggtcaggagatcgagaccatcctggctaacaaggtgaaactcagtttctactgaaaatac-aaaaaattagccgggcgtggtggcgggtgcctgtagtcccagctacttgggaggctgaggcaggagaatggcgtgaacccgggaggcggagcttgcagtgagccgagatcgcgccactg-cactccagcctgggcgacagagcgagactccgtctcaaaacaac-aaaa i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160357981 284 - 163208435 agtggctcacgcctgtaatcccagcacttt-gggaggctgaggtgggcggatca---cgaggtcaggagatcgagaccatcctggctaacacggtgaaacccggtttctactgaaaatac-aaaaaattagccgggcgtggtggcaggcgcctgtagtcccagctactctagaggctgaggcaggagaatggcatgaacccgggaggcggagcttgcagtgagccgagatcgcgccactg-cactccagtctgggcgacagagcgagactccgtctcaaaacaacaaaaa i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3630357 283 - 180051392 ggcggctcaagcctgtaatcccagcacttt-gggaggccgaggcgggcggatca---cgaggtcaggagatcgagaccatcctggctaatacggtgaaacccggtttctactgaaaatac-aaaaaattagccgggcgcggtggcgggcgcctgtggtcccagctactcgggaggctgaggcaggagaatggcctgaacccgagaggcggagcttgcagtgtgttgagatcgcaccactg-tactccagcctgggctacagagcgagactccatctcaaaaaaaa-aaaa i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3819435 283 - 181584905 ggcggctcaagcctgtaatcccagcacttt-gggaggccgaggcgggcggatca---cgaggtcaggagatcgagaccatcctggctaatacggtgaaacccggtttctactgaaaatac-aaaaaactagccgggcgcggtggcgggcgcctgtagtcccagctactcgggaggctgaggcaggagaatggcctgaacccgggaggcggagcttgcagtgtgttgaaatcgcaccactg-cactccagcctgggctacagagcgagactccatctcaaaaaaaa-aaaa i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3839215 283 + 4899514 ggcggctcaagcctgtaatcccagcactttggggaggccgaggcgggcggatca---cgaggtcaggagatcgagaccatcctggctaatacggtgaaacccggtttctactgaaaatca-aaaaaactagccgggcgcggtggcgggcgcctgtagt-ccagctactcgggaggctgaggcaggagaatgg-ctgaacccgggaggcggagcttgcagtgtgttgagatcgcaccactgccactccagcctgggctacagagcgagactccatctcaaaaaaaa-aaaa i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012001120v1 3563424 283 - 3647740 ggcggctcaagcctgtaatcccagcacttt-gggaggccgaggcgggcggatca---cgaggtcaggagatcgagaccatcctggctaatacggtgaaacccggtttctactgaaaatac-aaaaaactagccgggcgaggtggcgggcgcctgtagtcccagctacctgggaggctgaggcaggagaatggcctgaacccgggaggcggagcttgcagtgagctgagatcgcgccactg-cactccagcctgggcgacagagcgagactccgtctcaaaaaaaa-aaaa i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79697647 283 + 82825804 ggcggctcaagcctgtaatcccggcacttt-gggaggccgaggcgggcggatca---cgaggtcgggagatcgagaccatcctggctaatacagtgaaacccggtttctactgaaaatac-aaaaaattagccgggcgaggtggcgggcgcctgcagtcccaggtactcgggaggctgaggcaggagaatggtgtgaacccgggaggcggagcatgcagtgagctgagatccggccactg-cactccagcctgggagacagagcgagattccatcttaaaaaaaa-aaaa i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1660985 232 - 1768974 ggcggctcaagcctgtaatcccagcacttt-gggaggccgaggcgggcggatca---cgaggtcaggagatcgagaccatcctggctaatacggtgaaacccggtttctactgaaaatac-aaaaaactagccgggcgaggtggc-ggcgcctgtagtcccaggtactcgggaggctgaggcaggagaat---------------------------------------------------cactccagcctgggcgacagagcCAGATTCCATATCaacaaaaa-aaaa i manLeu1.NW_012103876v1 C 0 C 0 s colAng1.NW_012117422v1 144672 283 - 815015 ggcggttcaagcctgtaatcccagcacttt-gggaggctgaggcgggcggttca---tgaggtcaggagatggagaccatcctggctaacacggtgaaacccggtttctactgaaaatacaaaaaaattagccgggcgaggtggt-ggcgcctgtagtcccagctactcgggaggatgaggcaggagaatggcgtgaacccaggaggaggagcttgcagtgagctgagatcgcaccactg-cactccagcctgggtaacagagaaggactccatctcaaaaaaaa-aaaa i colAng1.NW_012117422v1 C 0 C 0 e cebCap1.NW_016108322v1 83889 1160 + 99478 M e saiBol1.JH378186 25686 0 + 10068113 C e calJac3.chr2 140357392 0 - 204313951 C e aotNan1.NW_018505037v1 2582784 352 + 3417841 I a score=-35659.000000 s hg38.chr5_KI270795v1_alt 124070 3 + 131892 -aa-------------------G s panTro5.chr5 3437746 3 - 181907262 -aa-------------------G i panTro5.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 101386 3 + 152767 -aa-------------------G i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160358265 3 - 163208435 -aa-------------------G i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3630640 14 - 180051392 -aaaaaaaa--------aaaaaG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3819718 14 - 181584905 -aaaaaaaa--------aaaaaG i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3839498 12 + 4899514 -aaaaaaaa--------aaGA-- i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012001120v1 3563707 2 - 3647740 -aG-------------------- i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79697930 22 + 82825804 -aaaaaaaaaaaaaaagaaaaaG i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1661217 15 - 1768974 -aaaaaaaaa-------aaaaaG i manLeu1.NW_012103876v1 C 0 C 0 s colAng1.NW_012117422v1 144955 2 - 815015 -aG-------------------- i colAng1.NW_012117422v1 C 0 C 0 s calJac3.chr2 140357392 3 - 204313951 AAA-------------------- i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 25686 3 + 10068113 AAA-------------------- i saiBol1.JH378186 C 0 C 0 e cebCap1.NW_016108322v1 83889 1160 + 99478 M e aotNan1.NW_018505037v1 2582784 352 + 3417841 I a score=1226319.000000 s hg38.chr5_KI270795v1_alt 124073 201 + 131892 AGCATCTCCTCTACCGAGAAGGGAAG---ACAGGGGAGTCCATCGGGTGCGCACTCCGCTGTCGCCCAGGCTGGGTTGCTGGGGCTCCAGTCTGCGGT-GTTCAGGCCCAAAGCCTGCAGCCTGTTCAGTCCA---GGGCACCGCAGGC-GCCAGAACTCT-GGCGGG----CG---GGCGGGCGGCGAGAAGGGCTGTCTAGGGCGCACGCCTCCC s panTro5.chr5 3437749 205 - 181907262 AGCATCTCCTCTACCGAGAAGGGAAG---ACAGGGGAGTCCATCGGGTGCGCACTCCGCTGTCGCCCAGGCTGGGTTGCTGGGGCGCCAGTCTGCGGT-GTTCAGCCCCAAAGCCTGCAGCCTGTTCAGTCCA---GGGCACCGCAGGC-GCCAGAACTCT-ggcgggcggacg---ggcgggcggCGAGAAGGGCTGTCTAGGGCGCACGCCTCCC i panTro5.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 101389 208 + 152767 AGCATCTCCTCTACCGAGAAGGGAAG---ACAGGGGAGTCCATCGGGTGCGCACTCCGCTGTCGCCCAGGCTGAGTTGCTGGGGCGCCAGTCTGCGGT-GTTCAGCCCCAAGGCCTGCAGCCTGTTCAGTCCA---GGGCACCGCAGGC-GCCAGAACTcg-ggcgggcgggcgggcggcgggcggCGAGAAGGGCTGTCTAGGGCGCACGCCTCCC i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160358268 201 - 163208435 AGCATCTCTTCTACCGAGAAGGAAAG---ACAGGGGAGTCCATCGGGTGCGCACTCCGCTGTCGCCCAGGCTGAGTTGCTGGGGCGCCAGTCTGCGGT-GTTCAGCCCCAAAGCCTGCCGCCTGTTCAGTCCA---GGGCACCGCAGGC-GCCAGAACTCT-Agcggg----cg---ggcgggcggcgagagggACTGTCTAGTGCGCACGCCTCCT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3630654 197 - 180051392 ACTAGCTCCTCTATCGAGAAGAGAAG---ACAGGGGAGTCCGTCGGGTGCGCACTCCCCTGTCGCCCAGGCTGAGTGGCTGGGGCGCCAGTCTGCAGT-GCTGCGCCCCAAAGCCTCCAGCCTTTTCAGTCCA---GGGTACTGCAGGC-GCCCGAACTCC-GG--------CG---GGTGGGCGGCGAGAAGGGCTCTCTAGTGCGCGCCTCTCCG i rheMac8.chr6 C 0 I 25 s macFas5.chr6 3819732 197 - 181584905 ACTAGCTCCTCTATCGAGAAGAGAAG---ACAGGGGAGTCCGTCGGGTGCGCACTCCCCTGTCGCCCAGGCTGAGTGGCTGGGGCGCCAGTCTGCAGT-GCTGCGCCCCAAAGCCTCCAGCCTTTTCAGTCCA---GGGTACTGCAGGC-GCCCGAACTCC-GG--------CG---GGTGGGCGGCGAGAAGGGCTCTCTAGTGCGCGCCTCTCCG i macFas5.chr6 C 0 I 25 s macNem1.NW_012020287v1 3839510 196 + 4899514 CTTAGCTCCTCTATCGAG-AGAGAAG----CAGGGGAGTCCGTCGGGGGCGAACTCCCCTGTCGCCCAGGCTGAGTGGCT-GGGCGCCAGTCTGCAGTGGCTGC-TCCCAAAGCCTCCAGCCTTTTCAGTCCACCCAGGGTCTGCAGGCGGCCCGAACT-C-GG--------C----GGTGGGCGGCGAGAAGGGCTCTCTAGTGCGCGCCTCTCCG i macNem1.NW_012020287v1 C 0 I 25 s cerAty1.NW_012001120v1 3563709 199 - 3647740 ACTATCTCCTCTACTGAGAAGGGAAGAAGACAGGGGAGTCCGTC-GGTGCGCACTCCCCCGTCGCCCAGGCTGAGTGGCTGGGGCGCCAGTCTGCGGT-GTTACGCCCCAAAGCTTCCAGCCTTTTCAGTCCA---GGGTACCGCAGGC-GCCCGAACTCC-GG--------CG---GGTGGGCGGCGAGAAGGGCTCTCTAGTGCGCGCCCCTCCG i cerAty1.NW_012001120v1 C 0 I 25 s chlSab2.chr23 79697952 197 + 82825804 ACTGTCTCCTCTACTGAGAAGGGAAG---ACAGGGGAGTCCGTCGGGTGCGCACTCCCCCGTCGCCCAGGCTGAGTGGCTGGGGCGCCAGTCTGCGGT-GTTACGCCCCAAAGCCTCCGGCCTTTTCAGTCCA---GGGTACCGCAGGC-GCCAGAACTCC-GG--------CG---GGTGGGCGGCGAGAAGGGCTCTCTAGTGCGCGCCCCTCCC i chlSab2.chr23 C 0 I 25 s manLeu1.NW_012103876v1 1661232 197 - 1768974 ACTAGCTCCTCTATCGAGAAGAGAAG---ACAGGGGAGTCCGTCGGGTGCGCACTCCCCTGTCGCCCAGGCTGAGTGGCTGGGGAGCCAGTCTGCAGT-GCTGCGCCCCAAAGCCTCCAGCCTTTTCAGTCCA---GGGTACTGCAGGC-GCCCGAACTCC-GG--------CG---GGTGGGCGGCGAGAAGGGCTCTCTGGTGCGCGCCGCTCCG i manLeu1.NW_012103876v1 C 0 I 25 s colAng1.NW_012117422v1 144957 198 - 815015 ACTGTCTCCTCTACTGAGAAGGGAAG---ACAGGGGAGTCCGCCGGGTGCGCACTCCCCTGGCGCCTAGGCTGAGTTGCTGGGGCGCCAGTCTGCGGT-GTTACGCCCCAAAGCCTCCAGCGTTTTCAGTCCA---GGGTACCGCAGGC-GCCAGAACTCCTTG--------CG---GGTGGGCAGCGAGAAGGGCTCTCTAGTGCGCGcccctccc i colAng1.NW_012117422v1 C 0 I 43 s calJac3.chr2 140357395 195 - 204313951 AGTATCTCCTCTCCTGAGAAGGGAAG-----GGTGGAGTTGGTAGGGTGCACACTGCCCTATCGCCTAAGGTGGGTTGCTGGGGCGCCAGGCTGCGGC-GTTCAGCTCCAAAACCTCCCGCCTGTTCAGCCCA---GGGCACGGCAGGC-GCCAGAACCCC-GG--------CG---CTTGGGCGTCGAGAAGAGCCCTTTAGTGCGCACCCCTCCC i calJac3.chr2 C 0 I 25 s saiBol1.JH378186 25689 197 + 10068113 AGTATCTCCTCTCCCGAGAAGGGAAG---ACGGGGGAGTTGGTAGGGTGCGCATTGCCCTATCGCCTAAGCTAGGTTGCTGGGGCGCCAGGCTGCAGC-GTTCAGCTCCAAAACCTCCCGCCTGTTCAGTCCA---GGGCACGGCAGGC-ACCAGAACTCC-GG--------CG---CCTGGGCGTCGAGAAGTGCCCTTTAGTGCGCGCCCCTCCC i saiBol1.JH378186 C 0 I 20 s aotNan1.NW_018505037v1 2583136 197 + 3417841 AGCATCTCCTCTCCCGAGAAGGGAAG---ACGGGGGAGTTGGTAGGGTGCGCACTGCCCTATCGCCTAAGGTGGATTGCTAGGGCGCCAGGCTGCGGC-GTTCAGCTCCAAAACCTCCCGCCTGTTCAGTCCA---GGGCACTGCAGGC-GCCAGAACTCC-GG--------AG---CGTGGGCGTCGAGAAGGGCCCTTTAGTGCGCACCCCTCCC i aotNan1.NW_018505037v1 I 352 I 25 e cebCap1.NW_016108322v1 83889 1160 + 99478 M a score=57817.000000 s hg38.chr5_KI270795v1_alt 124274 20 + 131892 GCAGGGGCGTCAGAGGGTC-G- s panTro5.chr5 3437954 20 - 181907262 GCAGGGGGGTCAGAGGGTC-G- i panTro5.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 101597 21 + 152767 GCAGGGGGCTCAGAGGGTCGG- i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160358469 20 - 163208435 GCAGGAGGGTCAGAGGGCC-G- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3630876 18 - 180051392 GCAGGAG-GCCGGAGGGTC--- i rheMac8.chr6 I 25 C 0 s macFas5.chr6 3819954 18 - 181584905 GCAGGAG-GCCGGAGGGTC--- i macFas5.chr6 I 25 C 0 s macNem1.NW_012020287v1 3839731 18 + 4899514 GCAGGAG-GCCGGAGGGTC--- i macNem1.NW_012020287v1 I 25 C 0 s cerAty1.NW_012001120v1 3563933 18 - 3647740 GCAGGAG-GCCGGAGGGTC--- i cerAty1.NW_012001120v1 I 25 C 0 s chlSab2.chr23 79698174 18 + 82825804 GCGGGAG-GCCGGAGGGTC--- i chlSab2.chr23 I 25 C 0 s manLeu1.NW_012103876v1 1661454 18 - 1768974 GCAGGAG-GCCGGAGGGTC--- i manLeu1.NW_012103876v1 I 25 C 0 s calJac3.chr2 140357615 19 - 204313951 GCAGGGG-TTCGGAAGGTC--G i calJac3.chr2 I 25 C 0 s saiBol1.JH378186 25906 14 + 10068113 -----GG-GTGGGAGGGTC--G i saiBol1.JH378186 I 20 C 0 s aotNan1.NW_018505037v1 2583358 19 + 3417841 GCAGGGG-GTCGGAGGGTC--G i aotNan1.NW_018505037v1 I 25 C 0 e cebCap1.NW_016108322v1 83889 1160 + 99478 M e colAng1.NW_012117422v1 145155 43 - 815015 I a score=513284.000000 s hg38.chr5_KI270795v1_alt 124294 75 + 131892 GGGCCGCAGGAAAGGAGGTGGGCGAGGACTAGCGAATGTAGAAGGGAAGGGCGCAGAGAACTTG--ACTTCCCACCT s panTro5.chr5 3437974 75 - 181907262 GGGCCGCAGGAAAGGAGGTGGGCGAGGACTAGCCAATGTAGAAGGGAAGGGCGCAGAGAACTTG--ACTTCCCACCT i panTro5.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 101618 75 + 152767 GGGCCGCAGGAAAGGAGGTGGGCGAGGACTAGCGAATGTAGAAGGGAAGGGCGCAGAGGACTTG--ACTTCCCACCT i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160358489 75 - 163208435 GGGCCGCAGGAAAGGAGGTGGGCGAGGACTAGCGAATGCAGAAGGGAAGGGCGCAGAGAACTTG--ACTTCCCACCT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3630894 77 - 180051392 GGGCTGCAGGAGAGGAGGTTGGCGAGGACTAGCGAATGTAGAATGGAAGGGCGCAGAGAACTTGAAACTTCCCGCCT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3819972 77 - 181584905 GGGCTGCAGGAGAGGAGGTTGGCGAGGACTAGCGAATGTAGAATGGAAGGGCGCAGAGAACTTGAAACTTCCCGCCT i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3839749 77 + 4899514 GGGCTGCAGGAGAGGAGGTTGGCGAGGACTAGCGAATGTAGAATGGAAGGGCGCAGAGAACTTGAAACTTCCCGCCT i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012001120v1 3563951 75 - 3647740 GGGCTGCAGGAGAGGAGGTCGGCGAGGACTAGCGAATGTAGAATGGAAGGGCGCAGAGAGCTTG--ACTTCCCGCCT i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79698192 75 + 82825804 GGGCTGCAGGAGAGGAGGTCGGCGAGGACTAGCGGATGGAGAATGGAAGGGCGCAGAGAACTTG--ACTTCCCGCCT i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1661472 75 - 1768974 GGGCTGCAGGAGAGGAGGTTGGCGAGGACTAGCGAGTGTAGAATGGAAGGGCGCAGAGCACTTG--ACCTCCCGCCT i manLeu1.NW_012103876v1 C 0 C 0 s colAng1.NW_012117422v1 145198 75 - 815015 GGGCTGCAGGAGAGGAGGTCCGCGAGGACTAGCGAATGTAGAATGGAAGGGCGCAGAGAACTTG--ACTTCCCGCCT i colAng1.NW_012117422v1 I 43 I 12 s calJac3.chr2 140357634 69 - 204313951 GGAACGCGGGAGAGGAGGTGGGCGAGGACTGGGGAATGTAGAAGGGAAGGGCGCAGAGAATTTG--ACCTC------ i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 25920 69 + 10068113 GGAACGCAGGAGAGGAGGTAGGTGAGGACTAGGGAATGTAGAAGGGAAGGGCGCAGAGAATTTG--ACCTC------ i saiBol1.JH378186 C 0 C 0 s aotNan1.NW_018505037v1 2583377 69 + 3417841 GGAACGCAGGAGAGGAGGTGGGCGAGGACTAGGGAATGTAGAAGGGAAGGGCGCAGAGAATTTG--ACCTC------ i aotNan1.NW_018505037v1 C 0 C 0 e cebCap1.NW_016108322v1 83889 1160 + 99478 M a score=201692.000000 s hg38.chr5_KI270795v1_alt 124369 109 + 131892 TTTGCGCTTTCCAG-GCCAGCTCAGGGGCGAGTGTGGGCAGGGCGAGTGTGGGCAGGGCGA-GTGTGGGCAGGGCGA---------GTGTGGGCACGGCGAGTGTGGGCACGGCGAGTGT s panTro5.chr5 3438049 120 - 181907262 TTTGCGCTTTCCAGCGCCAGCTCAGGGGCGAGTGTGGGCAGGGCGAGTGTGGGCAGGCTGATGTGCGGGCAGGGCGATTCTGTGGCATGTTGGCAGGGCGAGTGTGGGCACGGCGAGTGT i panTro5.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 101693 46 + 152767 TTTGCGCTTTCCAG-GCCAGCTCAGGGGCGAGTGTGGGCAGGGCGAG------------------------------------------------------------------------- i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160358564 46 - 163208435 TATGCGCTTTCCAG-GCCAGCTCAGGGGCGAGTGTGGGCAGGGCGAG------------------------------------------------------------------------- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3630971 45 - 180051392 TGTGCGCTTTCCAG-GCCAGCTCAGGGGCCAGTGTGGGGAGGGCGA-------------------------------------------------------------------------- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3820049 45 - 181584905 TGTGCGCTTTCCAG-GCCAGCTCAGGGGCCAGTGTGGGGAGGGCGA-------------------------------------------------------------------------- i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3839826 45 + 4899514 TGTGCGCTTTCCAG-GCCAGCTCAGCGGCCAGTGTGGGGAGGGCGA-------------------------------------------------------------------------- i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012001120v1 3564026 45 - 3647740 TATGCGCTTTCCAG-GCCAGCTCACGGGCCAGTGTGGGGAGGGCGA-------------------------------------------------------------------------- i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79698267 45 + 82825804 TGTGTGCTTTCCAG-GCCTGCTCAGGGGCCAGTGTGGGGAGGGCGA-------------------------------------------------------------------------- i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1661547 45 - 1768974 TGTGCGCTTTCCAG-GCCAGCTCCGGGGCCAGTGTGGGGAGGGCGA-------------------------------------------------------------------------- i manLeu1.NW_012103876v1 C 0 C 0 s calJac3.chr2 140357703 40 - 204313951 ----CGCTTTCCGG-GCCAGCTCAGGGGCGAGTGT-GGGAGGGCGA-------------------------------------------------------------------------- i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 25989 41 + 10068113 ----CGCTTTCTGG-GCCAGCTCAGGGGCCAGTGTCGGGAGGGCGC-------------------------------------------------------------------------- i saiBol1.JH378186 C 0 C 0 s aotNan1.NW_018505037v1 2583446 41 + 3417841 ----CGCTTTCCGG-GCCAGCTCAGGGGCGAGTGTGGGGAGGGCGA-------------------------------------------------------------------------- i aotNan1.NW_018505037v1 C 0 C 0 e cebCap1.NW_016108322v1 83889 1160 + 99478 M e colAng1.NW_012117422v1 145273 12 - 815015 I a score=6600.000000 s hg38.chr5_KI270795v1_alt 124478 1 + 131892 G s panTro5.chr5 3438169 1 - 181907262 G i panTro5.chr5 C 0 I 899 s rheMac8.chr6 3631016 1 - 180051392 G i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3820094 1 - 181584905 G i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3839871 1 + 4899514 G i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012001120v1 3564071 1 - 3647740 G i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79698312 1 + 82825804 G i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1661592 1 - 1768974 G i manLeu1.NW_012103876v1 C 0 C 0 s colAng1.NW_012117422v1 145285 1 - 815015 G i colAng1.NW_012117422v1 I 12 C 0 s calJac3.chr2 140357743 1 - 204313951 G i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 26030 1 + 10068113 G i saiBol1.JH378186 C 0 C 0 s aotNan1.NW_018505037v1 2583487 1 + 3417841 G i aotNan1.NW_018505037v1 C 0 C 0 e cebCap1.NW_016108322v1 83889 1160 + 99478 M e nomLeu3.chr2 160358610 0 - 163208435 C e gorGor5.CYUI01000356v1 101739 0 + 152767 C a score=142604.000000 s hg38.chr5_KI270795v1_alt 124479 27 + 131892 GGAGACCCTAGGTC-TGCGCCACCGCCG s panTro5.chr5 3439069 27 - 181907262 GGAGACCCTAGGTC-TGCGCCACCGCCG i panTro5.chr5 I 899 C 0 s gorGor5.CYUI01000356v1 101739 27 + 152767 GGAGACCCTAGGTC-TGCGCCACCGCCG i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160358610 27 - 163208435 GCAGACTCTAGGTC-TGCGCCACCGCCG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3631017 27 - 180051392 GGAGACCCCAGGTC-TGCGCCACCGCGG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3820095 27 - 181584905 GGAGACCCCAGGTC-TGCGCCACCGCGG i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3839872 27 + 4899514 GGAGACCCCAGGTC-TGCGCCACCGCGG i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012001120v1 3564072 27 - 3647740 GGAGACCCCAGGTC-TGCGCCACCGCGG i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79698313 27 + 82825804 GGAGACCCCAGGTC-TGCGCCACCGCGG i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1661593 27 - 1768974 GGAGACCCCAGGTC-TGCGCCACCGCAG i manLeu1.NW_012103876v1 C 0 C 0 s colAng1.NW_012117422v1 145286 27 - 815015 GGAGACCCCAGGTT-TGCGCCACCGCGG i colAng1.NW_012117422v1 C 0 C 0 s calJac3.chr2 140357744 14 - 204313951 GGAAACCCCAGGTC-------------- i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 26031 15 + 10068113 GGAGACCCCAGGTCT------------- i saiBol1.JH378186 C 0 C 0 s aotNan1.NW_018505037v1 2583488 14 + 3417841 GGAGACCCCAGGTC-------------- i aotNan1.NW_018505037v1 C 0 C 0 e cebCap1.NW_016108322v1 83889 1160 + 99478 M a score=4497285.000000 s hg38.chr5_KI270795v1_alt 124506 590 + 131892 GCGTGAGCCTGAAAAGCTGCTGGGAGAACCAGCTCCGAaacagagtgcccggaagagattgtgacacctatggaaatttaatgaat-tgataaagggatcgattcgattcaatgtgagaatgttagt-ttatttaataaatagtgctggtatagttgtcgatctag-aagaaactcaatcctctggttttcggtatacacaaaattggttctggatttattatag-G-TTTTTTGTTTTGCTTTACTTTTAGTCAAATCGTTGAAGAAATATTATGGGGCATTTTTCTAGGCTTTATTA-----------TTAACTATT----ATTATTCGATGAGACAACATCCTAAACTACACTTTTTGGCAAGCTACTCAGGCAGTATCTCTTACCATTTTAAATAAACATAACGTTTAACACAGCAATCCTAACTTGGGACAGCTATCCCACAAAAACAAAAGCACCTGGATAAGAGGAAA----Ctgtaggggaaagtgttttgatggaaacc--------ggca----tgagggccctcctttccggttttgattctatcgggtctctgaggccttccgggcttttgggctattttacaacattgtagc----tgattgcaatgcaaaaatagc s panTro5.chr5 3439096 590 - 181907262 GCGTGAGCCTGAAAAGCTGCTGGGAGAACCAGCTCCGAAACAGAGTGCCGGGAAGAGATTGTGACACCTATGGAAATTTAATGAAT-TGATAAAGGGATCGATTCGATTCAATGTGAGAATGTTAGT-TTATTTAATAAATAGTGCTGGTATAGTTGCCGATCTAG-AAGAAACTCAGTCCTCTGGTTTTCGGTATACACAAAATTGGTTCTGGATTTATTATAG-G-TTTTTTGTTTTGCTTTACTTTTAGTCAAATCGTTGAAGAAATATTATGGGGCATTTTTCTAGGCTTTATTA-----------TTAACTATT----ATTATTCGATGAGACAACATCCTAAACTACACTTTTTGGCAAGCTACTCAGGCAGTATCTCTTACCATTTTAAATGCACCTAACGTTTAACACAGCAATCCTAACTTGGGACAGCTATCCCACAAAAACAAAAGCACCTGGATAAGAGGAAA----Ctgtaggggaaagtgttttgatggaaacc--------ggca----tgagggccctcctttccggttttgattctatcgggtctctgaggccttccgggcttttgggctattttacaacattgtagc----tgattgcaatgcaaaaatagc i panTro5.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 101766 588 + 152767 GC-TGAGCCTGAAAAGCTGCTGGGAGAACCAGCTCCGAAACAGAGTGCCCGGAAGAGATTGTGACACCTATGGAAATTTAATGAAT-TGATAAAGGGATCGATTCGATTCAATGTGAGAATGTTAGT-TTATTTAATAAATAGTGCTGGTATAGTTGTCGATCTAG-AAGAAACTCAATCCTCTGGTTTTCGGTATACA-AAAATTGGTTCTGGATTTATTATAG-G-TTTTGTGTTTTGCTTTACTTTTAGTCAAATCGTTGAAGAAATATTATGGGGCATTTTTCTAGGCTTTATTA-----------TTAACTATT----ATTATTGGATGAGACAACATCCTAAACTACACTTTTTGGCAAGCTACTCGGGCAGTATTTCTTACCATTTTAAATAAACATAACGTTTAACACAGCAATCCTAACTTGGGACAGCTATCCCACAAAAACAAAAGCACCTGGATAAGAGGAAA----Ctgtaggggaaagtgttttgatggaaacc--------ggca----tgaaggcccacctttccggttttgattctatcgggtctctgaggccttccgggcttttgggctattttacaacattgtagc----tgattgcaatgcaaaaatagc i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160358637 590 - 163208435 GCGTGAGCCTGAAAAGCTGCTGGGAGAACCAGCTCCGAAACAGAGTGCCCGGAAGAGATTGTGACACCTATGGAAATTTAATGAAT-TGATAAAGGGATCAATTCGATTCCATGTGAGAACGTTAGT-TTATTTAATAAATAGTGCTGTTATAGTTGTCGATCTAG-GAGAAATTCAGTCCTCTGGTTTTCGGTATACACAAAATTGGTTCTGGATTTATTATAG-G-TTTTTTGTTTTGCTTTACTTTTAATCAAATCGTTAAAGAAATATTAGGGGGCATTTTTCTAGGCTTTATTA-----------TTAACTATT----ATTATTCGATGAGACAATATCCTAAATTACACTTTTTGGCAAGCTAATCAGGCAGAATCTCTTACCATTTTAAATGCACATAACGTTTAACACAGCAGTCCTAACTTGGGACAGCTATCCCACAAAAACAAAAGCACCGGGATAAGAGGAAA----Ctgtaggggaaactgtttcgatggaaagc--------agca----tgagggccctcctttccagttttgattctatggggtctctgaggccttcctggcctttgagctatttcgcaacattgtagc----tgattgcagtgcaaaaatagc i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3631044 585 - 180051392 GCGTGAGCCTGAAAAGCTGCTGGGAGAACCCCCTCCAAAATAGAGTGCCCGGAAGAGATTGTAACACCTATGGAAATTTAATGAAT-TAATGAAGGGATCAATTTGATTCAGTGTGAGAATGTTAGT-TTATTTAATA------GCTGGTATAGTTGTCCATCTAG-AAGAAACTCAGTCCTCTGGTTTTCGGTATACACAAAATTGGTTCTGGATTTATTATAG-G-TTTTTTGTTTTGCTTTGCTTTTGGTCAAATCGTTAAAGAAGTATTAGGGGGCATTTTTCTAGGCTttattattatta-----ttaattatt----attattaGGTGAGACAACATC-----CTATACTTtttggcaagctaatcaggcagtatctcttaccattttaaatgcacataacctttaacacagcaatcctaacttgggacagctatcccacaaaaatacAACCAACTGGGTAAGAGGAAA----Ctgtaggggaaactgttttgacagaaacc--------ggca----ttaaggccctcctttccagttttgattctatggagtctctgaggccttcctggcctttgggctattttacaacattgtagc----tgattgcaatgcaaaaatagc i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3820122 585 - 181584905 GCGTGAGCCTGAAAAGCTGCTGGGAGAACCCCCTCCAAAATAGAGTGCCCGGAAGAGATTGTAACACCTATGGAAATTTAATGAAT-TAATGAAGGGATCAATTTGATTCAGTGTGAGAATGTTAGT-TTATTTAATA------GCTGGTATAGTTGTCCATCTAG-AAGAAACTCAGTCCTCTGGTTTTCGGTATACACAAAATTGGTTCTGGATTTATTATAG-G-TTTTTTGTTTTGCTTTGCTTTTGGTCAAATCGTTAAAGAAGTATTAGGGGGCATTTTTCTAGGCTttattattatta-----ttaattatt----attattaGGTGAGACAACATC-----CTATACTTtttggcaagctaatcaggcagtatctcttaccattttaaatgcacataacctttaacacagcaatcctaacttgggacagctatcccacaaaaatacAACCAACTGGGTAAGAGGAAA----Ctgtaggggaaactgttttgacagaaacc--------ggca----ttaaggccctcctttccagttttgattctatggagtctctgaggccttcctggcctttgggctattttacaacattgtagc----tgattgcaatgcaaaaatagc i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3839899 584 + 4899514 GCGTGAGCCTGAAAAGCTGCTGGGAGAACCCCCTCCAAAATAGAGTGCCCGGAAGAGATTGTAACACCTATGGAAATTTAATGAAT-TAATGAAGGGATCAATTTGATTCAGTGTGAGAAAGTTAGT-TTA-TTAATA------GCTGGTATAGTTGTCCATCTAG-AAGAAACTCAGTCCTCTGGTTTTCGGTATACACAAAATTGGTTCTGGATTTATTATAG-G-TTTTTTGTTTTGCTTTGCTTCTGGTCAAATCGTTAAAGAAGTATTAGGGGGCATTTTTCTAGGCTttattattatta-----ttaattatt----attattaGGTGAGACAACATC-----CTATACTTtttggcaagctaatcaggcagtatctcttaccattttaaatgcacataacctttaacacagcaatcctaacttgggacagctatcccacaaaaatacAACCAACTGGGTAAGAGGAAA----Ctgtaggggaaactgttttgatagaaacc--------ggca----ttaaggccctcctttccagttttgattctatggagtctctgaggccttcctggcctttgggctattttacaacattgtagc----tgactgcaatgcaaaaatagc i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012001120v1 3564099 593 - 3647740 GCGTGAGGCTGAAAAGCTGCTGGGAAAACCCCTTCCAAAATAGAGTGCCCAGAAGAGATTGTAACACCTATGGAAATTTAATGAAT-TGATGAAGGGATCAATTCGATTCCGTGTGAGAATGTTAGT-TTATTTAATA------GCTGGTATAGTTGTCCATCTAG-AAGAAACTCAGTCCTCTGGTGTTCGGTATACACAAAATTGGTTCTGGATTTATTATAG-G-TTTTTTGTTTTGCTTTGCTTTTGGTCAAATCGTTAAAGAAGTATTAGGGGGCATTTTTCTAGGCTttattattatta-----ttaattatt----attattaGGTGAGACAACATC-----CTATACTTtttggcaagctaatcaggcagtatctcttaccattttaaatgcacataacctttaacacagcaatcctaacttgggacagctatcccacaaaaatacAACCAACTGGGTAAGAGGAAA----Ctgtaggggaaactgttttgaccgaaactggcattaaggca----ttaaggccctcctttccagttttgattctatggagtctctgaggccttcctggcctttgggctattttacaacattgtagc----tgattgcaatgcaaaaatagc i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79698340 587 + 82825804 GAGTGAGCCTGAAAAGCTGCTGGGAGAACCCCCTCCAACATAGAGTGCCCAGAAGAGATTGTAACACCTATGGAGATTTAATGAAC-TGATGAAGGGATCAATTCGATTCAGTGTGAGAATGTTAGT-TTATCTAATA------GCTGGTATAGTTGTCCATCTAG-AAGAAACTCAGTCCTCTGGTTTTCGGTATACACAAAATTGGTTCTGGATTTATTATAG-G-TTTTTTGTTTTGCTTTGCTTTTGGTCAAATCGTTAAAGAAGTATTAGGGGGCATTTTTCTAGGCTttattattatta-----tt-atta------attattaGGTGAGACAACATCCTAAACTATACTTtttggcaagctaatcaggcagtatctcttaccattttaaatgcacataatctttaacacagcaatcctaACTTGGGACAGCTATCCCCCAAAAATACAACCAACTGGGTAAGAGGAAA----Ctgtaggggaaactgttttgacagaaacc--------ggca----ttaaggccctcctttccagttttgattctatggagtctctgaggccttcctggcctttgggctattttgcaacattgtagc----tgattgcaatgcaaaaatagc i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1661620 586 - 1768974 GCGTGAGCCTGAAAAGCTGCTGGGAGAACCCCCTCCAAAATAGCGTGCCCGAAAGAGATTGTAACACCTATGGAAATTTAATGAAT-TAATGAAGGGATCAATTTGATTCAGTGTGAGAATGTTGGT-TTATTTAATA------GCTGGTATAGTTGTCCATCTAG-AAGAAACTCAGTCCTCTGGTTTTCGGTATACACAAAATTGGTTCTGGATTTATTATAG-GTTTTTTTGTTTTGCTTTGCTTTTGGTCAAATCGTTAAAGAAGTATTAGGGGGCATTTTTCTAGGCTttattattatta-----ttaattatt----attattaGGTGAGACAACATC-----CTATACTTtttggcaagctaatcaggcagtatctcttaccattttaaatgcacataacctttaacacagcaatcctaacttgggacagctatcccacaaaaatacAACCAACTGGGTAAGAGGAAA----Ctgtaggggaaactgttttgacagaaacc--------ggca----ttaaggccctcctttccagttttcattctatggagtctctgaggccttcctggcctttgggctattttacaacattgtagc----tgattgcaatgcaaaaatagc i manLeu1.NW_012103876v1 C 0 C 0 s colAng1.NW_012117422v1 145313 599 - 815015 GCGTGAGGCTGAAAAACTGCTGGGAGAACCCCCTCCAAAATAGAGTGCCCGGAAGAGATTGTAACACCTATGGAAATTTAATGAAT-TGATGAAGGGATCAATTCGATTCAGTGTGAGAATGTTAGTCTTATTTAATA------GCTGGTATAGTTGTCCATCTAG-AAGAAACTCAGTCCTCTGGTTTTCGGTATACACAAAATTTGTTCTGGATTGACTATAG-G-TTTTTTGTTTTGCTTTGCTTTTGGTCAAATCGGTAAAGAAGTATT-GGGGGCATTTTTCTAGGCTttattattattaattattttattattattaattattaGGTGAGACAACATCCTAAACTATTCTTtttggcaagctaataaggcagtatctcttaccattttaaatgcacataacctttaacacagcaatcctaacttgggacagctatcccacaaaaataAAACCAACTGGGTAACAGGAAA----CTGTAGGGGAAATTGTTTTGACGGAAACC--------GGCA----CTAAGGCCCTCCTTTCCTGTTTTCATTGTACGGAGTTTCTGAGGCCTTCCTGgcctttgggctattttacaacattgtagc----tgattgcaatccaaaaatagc i colAng1.NW_012117422v1 C 0 C 0 s calJac3.chr2 140357758 584 - 204313951 GTGTGAGCCTGAAAAACTGCTGAGAGAACCAGCCCcaaaataga--gcccggaagagactgtaacacctgtggaaatttaatgtatatgataaacggatcagtttgattcaatgtgagaatgttagt-ttatttaataaatagtgctgataaagctgtcgatctagaaagtaactcagtcctctcgttttcggtatacagaaaattggttccagatttattagag-T-TTTTTTGTTTTGCTTTGCTTTTAGTCA-----TTAAATAAATATTAGGGGGCA-TTTTCTAGGCTTT------------------ATGATT----ATTATTAGATGAGACAACATCCTACACTACACTTTTTGGCAAGCTAATCAGGCAATATCTCTTACCATTTTAAATGCACATGACATTTAACGCAGCAATCCTACCTCGGGACAGCTTTCTCACAGAAATAAAAGCGCCTGTGTAAGAGGAAA----CAgtagggaaaa-tgttttcatggaaaac--------tgcattgtttaaggccctcctttccagttttgatactctggggtctctgaggccttcgtggcctttgggctgttttacaacattgtagctaattgattgcaatgcgaaaatagc i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 26046 578 + 10068113 GCGTGAGCCTGAAAAGTTGCCAGGAGAACGAGCCCcaaaataga--gcccg---gagactgtaacacctgtggaaatttaatgtatgtgatgaacggctcaatttgattcaatgtgagaatggtagt-ttgtttaataaatagtgctaatacagctgtggatctag-aagaaactcagtcctctggttttcggtatacacaaaattggttcaagatttattatag-T-TTTTTTGTTTCGCTTTACTTTTAGTCA-----TTAAAGAAATATTAGGGGGCA-TTTTTCTGGCTTT---------------------ATT----ATTATTGGATGAGACAACATCCTAAACTACAA-TTTTGGCAAGCTAATCAGGCAATATCTCTTACTATTTTAAATGCACGTAACATTTAACAC-GCAATCCTACCTTGGGACAGCCGTCTCACAAACATAAAAGCGCCTGTGTAAGAGGAAAGCGCCTGTAGTGGAGA--gttttgatggaaaac--------cgcactgtttaaggccctcctttccagttttgatactctggggtctctggggccttcctggcttttgggctgttttacaacattacagctaattgattgcaatgcgaagatagc i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016108322v1 85073 584 + 99478 GCGTGAGCCTGAAAAGCCGCTGAGAGAACCAGCCCCAAAGTAGA--GCCCGGAAGAGACTGTAACACCTGTGGAAATTTAATGTATATAATAAACGGATCAATTTGATTCAATGTGAGAATGGTAGT-TTATGTAATAAATAGTGCTGATACAGCTGTCGATCTAG-AAGAAACTCAGTCCTCTGGTTTTCGATATACACAAAATTGGTTCCAGATTTATTATAG-T-TTTTTTGTTTTGCTTTGCTTTTAGTCA-----TTAAAGAAATATTAGGGGGCATTTTTCTAGGCTtta--------------tt-attatt----attattaGATGAGACAACATCCTAAACTACAA-TTTTGGCAAGCTaatcaggcaatatctc--aacattttaaatgcacataacatttaacacagcaatcctaccttgggacagctatctcacaaaaataaaagcgcctgtgtaagaggaAA----CAgtagggaaaa-tgttttgatggaaaac--------tgcattgtttaaggccctcctttacagttttgatactctggggtctctgaggccttcctggccttcgggctgttttacaacattgtagctaattgattgcaatgcgaagatagc i cebCap1.NW_016108322v1 M 1160 C 0 s aotNan1.NW_018505037v1 2583502 577 + 3417841 GCGTGAGCCTGAAAAGCTGCTGAAAGAACCAGCCCCAAAATAAA--GCCCGGAAGAGACTGTAACACCTGTGGAAATTTAATGTATATGATAAACGGATCAGTTTGATTCCATGTGAGAATGGTAGT-TTATTTAATAAATAGTGCTGATACAGCTGTCGAACTAG-AAGACACTCAGTCCTCTGGTTTTCGGTATACACGAAATTGGTTCCAGAtttattgtagtt-ttttttgttttgctttgctttTAGTCA-----TT----AAATATTAGGGGGCATTTTTCTAGGCTTT------------------ATTATT----ATTATCAGATGACACAACATTCTAAA-TACACTTTGTGGCAAGCTAATCAGGCAGTCTCTCTTACCATTTTAAACGCACA-AACGTTTAACACAGCAGTCCTACCTTGGGACAGCTATCTCACGAAAAGAAAAGCGCCTGTATAAGAGGAAA----CAgtaggggaaaatgttttgatggaaaac--------tgcattg-ttaaggccctcctttccagtttcggtactc--gggtctctgaggcctttctggcctttgggctgttttacaacattgtggctaattgattgcaatgagaagatagc i aotNan1.NW_018505037v1 C 0 I 15 a score=89906.000000 s hg38.chr5_KI270795v1_alt 125096 22 + 131892 cc-ggcccctagacaggtacgtg s panTro5.chr5 3439686 22 - 181907262 cc-ggcccctagacaggtatgtg i panTro5.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 102354 22 + 152767 cc-ggcccctagacaggtacgtg i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160359227 22 - 163208435 cc-ggcccctagacaggtacatg i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3631629 23 - 180051392 cctggcccctagacatgtacatg i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3820707 23 - 181584905 cctggcccctagacatgtacatg i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3840483 23 + 4899514 cctggcccctagacatgtacatg i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012001120v1 3564692 23 - 3647740 cctggcccctagacatgtacctg i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79698927 23 + 82825804 cctggcccctaggcgtgtacatg i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1662206 23 - 1768974 cctggcccctggacatgtacatg i manLeu1.NW_012103876v1 C 0 C 0 s colAng1.NW_012117422v1 145912 23 - 815015 cctggcccctagacatgtacatg i colAng1.NW_012117422v1 C 0 C 0 s calJac3.chr2 140358342 11 - 204313951 ------------acatgcacatg i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 26624 7 + 10068113 ------------acatgca---- i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016108322v1 85657 11 + 99478 ------------acgtgcacgtg i cebCap1.NW_016108322v1 C 0 C 0 e aotNan1.NW_018505037v1 2584079 15 + 3417841 I a score=330792.000000 s hg38.chr5_KI270795v1_alt 125118 51 + 131892 aattctgttccgtggagattcggttgactacgctccccaactgtggaagag s panTro5.chr5 3439708 51 - 181907262 aattctgttccgtggagattcggttgactacgctccccaactgtggaagag i panTro5.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 102376 51 + 152767 aattctgttccgtggagattcggttgactatgctccccaactgtggaagag i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160359249 51 - 163208435 aattctgttctgcggagattctgttgactaccctccccacctgtcgaagag i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3631652 51 - 180051392 aattctgttccgtggagctcgagttgactaccctctccaactgcccaagag i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3820730 51 - 181584905 aattctgttccgtggagctcgagttgactaccctctccaactgcccaagag i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3840506 51 + 4899514 aattctgttccgtggagctcgagttgactaccctctccaactgcccaagcg i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012001120v1 3564715 51 - 3647740 aattctgttccgtggagcttgagttgactaccctctccaactgCCCAAGAA i cerAty1.NW_012001120v1 C 0 I 17 s chlSab2.chr23 79698950 51 + 82825804 agttctgttccgtggagctggagttgactaccctctccaactgcccaagag i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1662229 51 - 1768974 aattctgttccgtggagctcgagttgactaccctctccaactgcccaagag i manLeu1.NW_012103876v1 C 0 C 0 s colAng1.NW_012117422v1 145935 49 - 815015 aat--tgtttcctggagcttgagttgactaccctctccaactgcccaagag i colAng1.NW_012117422v1 C 0 C 0 s calJac3.chr2 140358353 51 - 204313951 ctctctgttccttgcagatttagttgactattttccccacctgtgaaagac i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 26631 49 + 10068113 --ttctgttccttggaggtttagttgactattttccccacctgtgaaagat i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016108322v1 85668 51 + 99478 cattctgttccttggagatttagttggctattttccccgcctgtgaaagac i cebCap1.NW_016108322v1 C 0 C 0 s aotNan1.NW_018505037v1 2584094 51 + 3417841 aattctgttccttggagatttagttgactatttcccccacctgtgaaagac i aotNan1.NW_018505037v1 I 15 C 0 a score=275192.000000 s hg38.chr5_KI270795v1_alt 125169 36 + 131892 gccagctgtgtgtccatttacacgttcactttgcta s panTro5.chr5 3439759 36 - 181907262 gccagctgtgtgtccatttacacgttcactttgcta i panTro5.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 102427 36 + 152767 gccagttttgtgtccatttacacgttcactttgcta i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160359300 36 - 163208435 gccagtgttgtgtccatttacacgttcactttgcta i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3631703 36 - 180051392 gccagttttgtgtccattcacacgttcactttgcta i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3820781 36 - 181584905 gccagttttgtgtccattcacacgttcactttgcta i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3840557 36 + 4899514 gccagttttgtgtccattcacacgttcactttgcta i macNem1.NW_012020287v1 C 0 C 0 s chlSab2.chr23 79699001 36 + 82825804 gccagttttgtgtccattcacacgttcactttgcta i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1662280 36 - 1768974 gccagttttgtgtccattcacacgttcacttcgcta i manLeu1.NW_012103876v1 C 0 C 0 s colAng1.NW_012117422v1 145984 36 - 815015 gccagttttgtgtccatttacacgttcactttgcta i colAng1.NW_012117422v1 C 0 C 0 s calJac3.chr2 140358404 36 - 204313951 gccagttttgtatccatttacacgttcactttgata i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 26680 36 + 10068113 gccagttttgtgtccatttacatgttcagtttgata i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016108322v1 85719 36 + 99478 gccagctttgtgtctatttacacgttcactttgata i cebCap1.NW_016108322v1 C 0 C 0 s aotNan1.NW_018505037v1 2584145 36 + 3417841 gccagttttgtgtccatttacacgttcactttgata i aotNan1.NW_018505037v1 C 0 C 0 e cerAty1.NW_012001120v1 3564766 17 - 3647740 I a score=459036.000000 s hg38.chr5_KI270795v1_alt 125205 51 + 131892 ttcatctataaatgtgtctgttctttggattgtccttggtttaaacatctt s panTro5.chr5 3439795 51 - 181907262 ttcatctataaacgtgtctgttctttggattgtccttggtttaaacatctt i panTro5.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 102463 51 + 152767 ttcatctataaatgtgtctgttctttggattgtccttggtttaaacatctt i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160359336 49 - 163208435 ttcatctataaatgtgtctgttctttggattgtccttggtttaaacatc-- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3631739 51 - 180051392 ttcatctataaaagtgtctgttccttggattgtccttggtttaaacatctt i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3820817 51 - 181584905 ttcatctataaaagtgtctgttccttggattgtccttggtttaaacatctt i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3840593 51 + 4899514 ttcatctataaaagtgtctgttctttggattgtccttggtttaaacatctt i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012001120v1 3564783 51 - 3647740 TTCATctataaaagtgtctgttctttggattgtccttggtttaaacatctt i cerAty1.NW_012001120v1 I 17 C 0 s chlSab2.chr23 79699037 51 + 82825804 ttcatctataaaagtgtctgttctttggattgtccttggtttaaacatctt i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1662316 51 - 1768974 ttcatctataaaagtgtctgttctttggattgtccttggtttaaacatctt i manLeu1.NW_012103876v1 C 0 C 0 s colAng1.NW_012117422v1 146020 51 - 815015 tttatctataaaagtgtctgttctttggattgtccttggtttaaacatctt i colAng1.NW_012117422v1 C 0 C 0 s calJac3.chr2 140358440 51 - 204313951 ttcatctataaatgtgtctgttctctgaactgtctttggtttaaacatctt i calJac3.chr2 C 0 I 520 s saiBol1.JH378186 26716 51 + 10068113 ttcatctataaatgcgtctgttctttgaattgtctttggtttaaacatctt i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016108322v1 85755 51 + 99478 ttcatctataaatgtgtctgttctttgaattgtctttggtttaaacatctt i cebCap1.NW_016108322v1 C 0 C 0 s aotNan1.NW_018505037v1 2584181 51 + 3417841 ttcatctataaaagtgtctgttctttgaattgtctttggtttaaacatctt i aotNan1.NW_018505037v1 C 0 C 0 a score=24924.000000 s hg38.chr5_KI270795v1_alt 125256 5 + 131892 catta s panTro5.chr5 3439846 5 - 181907262 catta i panTro5.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 102514 5 + 152767 catta i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160359385 3 - 163208435 --tta i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3631790 5 - 180051392 cttca i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3820868 5 - 181584905 cttca i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3840644 5 + 4899514 cttca i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012001120v1 3564834 5 - 3647740 tttca i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79699088 5 + 82825804 cttca i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1662367 5 - 1768974 tttca i manLeu1.NW_012103876v1 C 0 C 0 s colAng1.NW_012117422v1 146071 5 - 815015 cttca i colAng1.NW_012117422v1 C 0 C 0 s calJac3.chr2 140359011 5 - 204313951 catta i calJac3.chr2 I 520 C 0 s saiBol1.JH378186 26767 5 + 10068113 CATTA i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016108322v1 85806 5 + 99478 catta i cebCap1.NW_016108322v1 C 0 C 0 s aotNan1.NW_018505037v1 2584232 5 + 3417841 CATTA i aotNan1.NW_018505037v1 C 0 I 598 a score=19873.000000 s hg38.chr5_KI270795v1_alt 125261 3 + 131892 ttg s panTro5.chr5 3439851 3 - 181907262 ttg i panTro5.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 102519 3 + 152767 ttg i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160359388 3 - 163208435 ttg i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3631795 3 - 180051392 ctg i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3820873 3 - 181584905 ctg i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3840649 3 + 4899514 ctg i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012001120v1 3564839 3 - 3647740 ctg i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79699093 3 + 82825804 ctg i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1662372 3 - 1768974 ctg i manLeu1.NW_012103876v1 C 0 C 0 s colAng1.NW_012117422v1 146076 3 - 815015 ctg i colAng1.NW_012117422v1 C 0 C 0 s calJac3.chr2 140359016 3 - 204313951 ttg i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 26772 3 + 10068113 TTG i saiBol1.JH378186 C 0 I 2659 s cebCap1.NW_016108322v1 85811 3 + 99478 ttg i cebCap1.NW_016108322v1 C 0 I 1615 e aotNan1.NW_018505037v1 2584237 598 + 3417841 I a score=74886.000000 s hg38.chr5_KI270795v1_alt 125264 14 + 131892 cctca---ataatgaat s panTro5.chr5 3439854 14 - 181907262 cctca---ataatgaat i panTro5.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 102522 14 + 152767 cctca---ataatgaat i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160359391 14 - 163208435 cctca---gtaatgaat i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3631798 17 - 180051392 cctcattaataatgaat i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3820876 17 - 181584905 cctcattaataatgaat i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3840652 17 + 4899514 cctcattaataatgaat i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012001120v1 3564842 17 - 3647740 cctcattaataatgaat i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79699096 17 + 82825804 cctcattgataatgaat i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1662375 17 - 1768974 cctcattaataatgaat i manLeu1.NW_012103876v1 C 0 C 0 s colAng1.NW_012117422v1 146079 17 - 815015 cctcattaataatgaat i colAng1.NW_012117422v1 C 0 C 0 s calJac3.chr2 140359019 17 - 204313951 cctcattaacaatgaat i calJac3.chr2 C 0 I 4 e cebCap1.NW_016108322v1 85814 1615 + 99478 I e saiBol1.JH378186 26775 2659 + 10068113 I e aotNan1.NW_018505037v1 2584237 598 + 3417841 I a score=621653.000000 s hg38.chr5_KI270795v1_alt 125278 111 + 131892 taagatatttagtacacaattattttgcatctc----tgagtcatgattttacct---ttaataaaaaaaaaatcctttagcaATATAACTGCAGAGGCACAAAACAAAACACCAAA------------------------------------C s panTro5.chr5 3439868 114 - 181907262 taagatatttagtacacaattattttgcatctc----tgagtcatgattttacctttattaaaaaAAAAAAAATCCTTCAGCAATATAACTGCAGAGGCACAAAACAAAACACCAAA------------------------------------C i panTro5.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 102536 110 + 152767 taagatatttagtacacaattattttgcatctc----tgagtcatgattttacct---ttaat-aaaaaaaaatcctttagcaATATAACTGCAGAGGCACAAAACAAAACACCAAA------------------------------------C i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160359405 109 - 163208435 taagatatttagtacacaattcttttgcatctc----tgagtcatgattttacct---ttaat--aaaaaaaatcctttagcaATATAACTGCAGAGGCACAAAACAAAACACCAAA------------------------------------C i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3631815 138 - 180051392 taagatattta-tacacaattattttgcatctc----tgagtcatgattttacct---t-------aaaaaaatcctttagcaATACAACTGCAGAGGCACAAAACAAAACACTAAACTCTGACTTGAATGGTAGAGGAATGGC-TGAGAGGCC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3820893 138 - 181584905 taagatattta-tacacaattattttgcatctc----tgagtcatgattttacct---t-------aaaaaaatcctttagcaATACAACTGCAGAGGCACAAAACAAAACACTAAACTCTGACTTGAATGGTAGAGGAATGGC-TGAGAGGCC i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3840669 139 + 4899514 taagatattta-tacacaattattttgcatctc----tgagtcatgattttacct---t-------aaaaaaatcctttagcaATACAACTGCAGAGGCACAAAACAAAACACTAAACTCTGACTTGAATGGTAGAGGAATGGCTTGAGAGGCC i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012001120v1 3564859 138 - 3647740 taagatattta-tacacaattattttgcatctc----tgagtcatgattttacct---t-------aaaaaaatcctttagcaATACAACTGCAGAGGCATAAAACAAAACACTAAACTCTGACTTGAATGGTAGAGGAATGGC-TGAGAGGCC i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79699113 136 + 82825804 taagatattta-tacacaattattttgcatctc----tgagtcatgattttacct---t-------gaaaaaatcctttagcaATACAACTGCAGAGGCACAAAACAAAACACTAAA--CTGACTTGAATGGTAGAGGAATGGC-TGAGAGGCC i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1662392 138 - 1768974 taagatattta-tacacaattattttgcatctc----tgagtcatgattttacct---t-------aaaaaaatcctttagcaATACAACTGCAGAGGCCTAAAACAAAACACTAAACTCTGACTTGAATGGTAGAGGAATGGC-TGAGAGGCC i manLeu1.NW_012103876v1 C 0 C 0 s colAng1.NW_012117422v1 146096 138 - 815015 taagatattta-tacacaactattttgcatctc----tgagtcatgattttacct---t-------aaaaaaatcctttagcaATACAACTGCAGAGGCACAAAACAAAACACTAAACTGTGACTTGAATGGTAGAGGAATGGC-TGAGAGGCC i colAng1.NW_012117422v1 C 0 C 0 s calJac3.chr2 140359040 109 - 204313951 taaaatatttagtagacaattattttgcatctctaggtgagtcatgattttacct---t------aaaaaccatcctttaccaATACAACTGCAGAGACACAAAACAAAACACCAAAC------------------------------------ i calJac3.chr2 I 4 C 0 s aotNan1.NW_018505037v1 2584835 111 + 3417841 taaaatatttagtacacaattattttgcatctctaggtgagtcatgattttacct---t----aaaaaaacaatcctttaccaATACAACTGCAGAGGCACAAAACGAAACACCAAAC------------------------------------ i aotNan1.NW_018505037v1 I 598 I 3568 e cebCap1.NW_016108322v1 85814 1615 + 99478 I e saiBol1.JH378186 26775 2659 + 10068113 I a score=679443.000000 s hg38.chr5_KI270795v1_alt 125389 142 + 131892 ---------------------------------------------AATGAACTGCCAGTTAGCAATGAAAACAATAAAATCTGTATGAGCCACTCGCAAGATGTCCATAGGTTGTTAGTTTTAAAAGGACATTA------TAACATATATGGCAGGATCCCA-ttttt-----gtttttattttttaagatggagtctc s panTro5.chr5 3439982 140 - 181907262 ---------------------------------------------AATGAACTGCCAGTTAGCAAGGAAAACAATAAAATCTGTATGAGCCACTCGCAAGATGTCCATAGGTTGTTAGTTTTAAAAGGACATTA------TAATATATATGGCAGGATCCCA--tttt-----gtttttatttttt-agacggactctc i panTro5.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 102646 143 + 152767 ---------------------------------------------AATGAACTGCCAGTTAGCAATGAAAACAATAAAATCTGTATGATCCACTCACAAGATGTCCATAGGTTGTTAGTTTTAAAAGGACATTA------TAATATATATGGCAGGATCCCAtttttt-----gtttttattttttaagatggagtctc i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160359514 136 - 163208435 ---------------------------------------------AATGAACTGCCAGTTAGCAATGAAAACAATAAAATCTGTATGATCCACTCGCAAGATGTCCATAGGTTGTTAGTTTTAAAAGGACATTA------TAATATATATGGCAGGATCCCA------------tttttattttttaagatgcaatctc i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3631953 146 - 180051392 ---------------------------------------------CATGAACTGCCAGTTCACAATGAAAACAATAAAATC--TATGATCCACTTGCAAGATGTCCATAGGCTGTTAGTTTTAAAAAGACGTTAACGGGTTAATATATATGGCAGGATCCCA-ttttt-----agttttgtttttaaagatggagtctg i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3821031 146 - 181584905 ---------------------------------------------CATGAACTGCCAGTTCACAATGAAAACAATAAAATC--TATGATCCACTTGCAAGATGTCCATAGGCTGTTAGTTTTAAAAAGACGTTAACGGGTTAATATATATGGCAGGATCCCA-ttttt-----agttttgtttttaaagatggagtctg i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3840808 146 + 4899514 ---------------------------------------------CATGAACTGCCAGTTCGCAATGAAAACAATAAAATC--TATGATCCAATTGCAAGATGTCCATAGGTTGTTAGTTTTAAAAAGACGTTAACGGGTTAATATATATGGCAGGATCCCA-ttttt-----agttttgtttttaaagatggagtctg i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012001120v1 3564997 148 - 3647740 ---------------------------------------------CATGAACTGCCAGTTAGCAATGAAAACAATAAAATCTGTATGATCCACTTGCAAGATGTCCATAGGTTGTTAGTTTTAAAAAGACGTTAACGGGTTCATATATATGGCAGGATCCCA-TTTTT-----ATTTTTGTTTTTGAAGATGGAGTCTT i cerAty1.NW_012001120v1 C 0 I 27 s chlSab2.chr23 79699249 148 + 82825804 ---------------------------------------------CATGAACTGCCAGTTAGCAATGAAAACAATACAATCTGTATGATCCACTTGCAAGATGTCCATAGGTTGTTAGTTTTAAAAAGACGTTAACGGGTTAGTATATATGGCAGGATCCCA-ttttt-----atttttatttttaaagatggagtctg i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1662530 148 - 1768974 ---------------------------------------------CATGAACTGCCAGTTAGCAATGAAAACAATAAAATCTGTATGATCTGCTTGCAAGATGTCCACAGGTTGTTAGTTTTAAAAAGACGTTAACGGGTTCATATATGTGGCAGGATCCAA-ttttt-----atttttatttttaaagatggagtctg i manLeu1.NW_012103876v1 C 0 C 0 s colAng1.NW_012117422v1 146234 148 - 815015 ---------------------------------------------CATGAACTGCCAGTTAGCAATGAAAACAATAAAATCTGTATGATCCACTTGCAAGATGTCCATAGGTTGTTAGTTTTAAAAAGACGTTAACGGGTTAATATATACGGCAGGATCCCA-ttttt-----atttttatttttaaagatggagtctt i colAng1.NW_012117422v1 C 0 C 0 s calJac3.chr2 140359149 197 - 204313951 AAACTCTGATTAGACTCGATTGACAGAGGAATGGCTGAGCAGCCCATCGAACAGCCACTTAGCAACAAAAACAGTAAAATCTGTGTGATTCACTTGCAAGATGTCCATAGGTTGTTA-TTTTAAAAAGACATTAAGGAGTTAATATATATAGCAGGATCCCA-tttttttttattttttattttttgagacggagtcag i calJac3.chr2 C 0 C 0 e cebCap1.NW_016108322v1 85814 1615 + 99478 I e saiBol1.JH378186 26775 2659 + 10068113 I e aotNan1.NW_018505037v1 2584946 3568 + 3417841 I a score=24618.000000 s hg38.chr5_KI270795v1_alt 125531 9 + 131892 gctctgtcg s panTro5.chr5 3440122 9 - 181907262 gctctgtcg i panTro5.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 102789 9 + 152767 gctctgtcg i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160359650 9 - 163208435 tctctgtcg i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3632099 9 - 180051392 gctctgatg i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3821177 9 - 181584905 gctctgatg i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3840954 9 + 4899514 gctctgacg i macNem1.NW_012020287v1 C 0 C 0 s chlSab2.chr23 79699397 9 + 82825804 gctctgacg i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1662678 9 - 1768974 tctctgacg i manLeu1.NW_012103876v1 C 0 C 0 s colAng1.NW_012117422v1 146382 9 - 815015 gctctgatg i colAng1.NW_012117422v1 C 0 C 0 s calJac3.chr2 140359346 7 - 204313951 gccgtgg-- i calJac3.chr2 C 0 C 0 e cebCap1.NW_016108322v1 85814 1615 + 99478 I e saiBol1.JH378186 26775 2659 + 10068113 I e cerAty1.NW_012001120v1 3565145 27 - 3647740 I e aotNan1.NW_018505037v1 2584946 3568 + 3417841 I a score=917189.000000 s hg38.chr5_KI270795v1_alt 125540 181 + 131892 ccaggctggagtgcagcggtgagatctcagctcactgcaacctccacctcctgggttcaagtgattctcctgcctcagcctcccgagtagctgggactacaggtgtgcgccaccacgccca----------gtatttttagtagacacggggtttcaccgtgttggcc---agggtctcaag-ctcctgatctca s panTro5.chr5 3440131 175 - 181907262 -caggcgggagtgcagc-gtgagatctcagctcaccgcaacctccacctcct-ggttcaagtgattctcctgcctcagc--tccgagtagctgggactaca-gtgtgcgccaccacgccca----------gtatttttagtagacacggggtttcaccgtgttggcc---agggtcttgag-ctcctgacctca i panTro5.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 102798 175 + 152767 ccaggctggagtgcagcggtgag-----agctcactgcaa-ctccacctcctgggttcaagtgattctcctgcctcagcctcccgagtagctgggactacaggtgtgcgccaccacgccca----------gtatttttagtagacacggggtttcaccgtgttggcc---agggtctcgag-ctcctgacctca i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160359659 184 - 163208435 ccaggctggagtgcagcggcgagatctcggctcactgcaacctctacctcctgggttcaagtgattctcctgcctcagcctcctgcgtagctgggactacaggtgtgcaccaccatgccca----------gtatttttagtagacacggggtttcaccgtgttggccaggagggtctcgat-ctcctgacctca i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3632108 183 - 180051392 ccaggctggagtgcagccgcgagatcttggctcactgcaacctccacctcctgggttcaagcgattctcctgccccagcctcccgagtagctgcgactacaggtgtttgccaccacgccca----------gta-ttttagtagagacgggctttcaccgtgttggccaggagggtctcgat-ctcctgacctcg i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3821186 183 - 181584905 ccaggctggagtgcagccgcgagatcttggctcactgcaacctccacctcctgggttcaagcgattctcctgccccagcctcccgagtagctgcgactacaggtgtttgccaccacgccca----------gta-ttttagtagagacgggctttcaccgtgttggccaggagggtctcgat-ctcctgacctcg i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3840963 184 + 4899514 ccaggctggagtgcagccgcgagatcttggctcactgcaacctccacctcctgggttcaagcgattctcctgccccagcctcccgagtagctgcgactacaggtgtttgccaccacgccca----------gtatttttagtagagacgggctttcaccgtgttggccaggagggtctcgat-ctcctgacctcg i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012001120v1 3565172 184 - 3647740 Gcaggctggagtgcagccgcgagatcttggctcactgcaacctccacctcctgggttcaagcgattcttctgccccagcctcccgagtagctgcgactacaggtgtttgccaccacgccca----------gtatttttagtagagacgggctttcaccgtgttggccaggagggtctcgat-ctcctgaccttg i cerAty1.NW_012001120v1 I 27 C 0 s chlSab2.chr23 79699406 185 + 82825804 ccaggctggagtgcagccgtgagatctcggctcactgcaacctccacctcctgggttccagtgattctcctgccccagcctcccgagtagctgcgactacaggtgtttgccaccacgccca----------gtatttttagtagagacgggctttcaccgtgttggccaggagggtctcgatccccctgaccttg i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1662687 184 - 1768974 ccaggctggagtgcagccgcgagatcttggctcactgcaacctccacctcctgggttcaagcgattctcctgcctcagcctcctgagtagctgcgactacaggtgtttgccaccacgccca----------gtatttttagtagagacggggtttcaccgtgttgaccaggagggtctcgat-ctcctgacctcg i manLeu1.NW_012103876v1 C 0 C 0 s colAng1.NW_012117422v1 146391 184 - 815015 ccaggctggagtacagctgcgagatcttggctcactgcaacctccacctcctgggttcaagcaattctcctgcctcagcctcccgagtagctgtgactacaggtgtttgccaccacgccca----------gtagttttagtagagatggggtttcaccatgttggccaggagagtctcgat-ctcctgacctcg i colAng1.NW_012117422v1 C 0 C 0 s calJac3.chr2 140359353 186 - 204313951 ccaggctggagtgcagtggctcagtctcggcccactgcaa--------tcccaggttcaagcagttctcctgcctcagcctcctgagtagctgggatcacaggcaagtgccaccccgtccggcttatttttgtatttttagtagagatggggtttcaccatgttggcctggatggtctcgat-cttctgacctag i calJac3.chr2 C 0 C 0 e cebCap1.NW_016108322v1 85814 1615 + 99478 I e saiBol1.JH378186 26775 2659 + 10068113 I e aotNan1.NW_018505037v1 2584946 3568 + 3417841 I a score=1170841.000000 s hg38.chr5_KI270795v1_alt 125721 190 + 131892 tgatctgcctgcctccgcctcgcaaagcgctgggattacaggcgtgagccac-ccgcacctggcAGGATCCCATTTTCAATTTTAAAAAGG-AAAAAGCCATTAGCCTGGGCTA-TATAACAAACACAAAGCCACCCAGATAGCACTGAGTACCCCTCGGTTCAGATCCTGTGTTACACTGTGCTTTCCACTT s panTro5.chr5 3440306 188 - 181907262 tgatctgcctgcctccgcctcgcaaagtgct-ggattacaggcgtgagccacactgcgcctggcAGGAT-CCATTTTCAATTTTAAAAATG-AAAAAGCCATTAGCCTGGGCTA-TATAACAAACACCAAGCCACCCAGATAGCACTGAGTACCCCT-GGTTCAGCTCCTGTGTTACACTGTGCTTTCCACTT i panTro5.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 102973 191 + 152767 tgatctgcctgcctccgcctcccaaagtgctgggattacaggcgtgagccac-ccgcgcctggcAGGATCCCATTGTCAATTTTAAAAAGGAAAAAAGCCATTAGCCTGGGCTA-TATAACAAACACAAAGCCACCCAGATAGCACTGAGTACCCCTCGGTTCAGCTCCTGTGTTACACTGTGCTTTCCACTT i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160359843 191 - 163208435 tgatctgcctgcctcagcctcccaaagtgctgggattacaggcgtgagccac-ctgcgcctggcAGGATCCCATTTTCAATTTTAAATAGG-AAAAAGCCATTAGCCTGGGCTAGTATAACAAACACAAAGCCACCCAGATAGCACTGAGTACCCCTCGGTTCAGCTCCTGTGTTACGCTGCGCTTTCCACTT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3632291 191 - 180051392 tgatctgcctgcctcagtctcccagagtactgggattacaggtgtgagccac-ccgtgcctggcAGGATCCCATCTTTAATTTTTAAAAGG-AAAAAGCCATTAGCCTGGGCTAGTATAACAAACACAAAGCCACCTAGACAGCACTAAGTACCTCCGGGTTCAGCTCCTATGTTACACTGTGCTTTCTACTT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3821369 191 - 181584905 tgatctgcctgcctcagtctcccagagtactgggattacaggtgtgagccac-ccgtgcctggcAGGATCCCATCTTTAATTTTTAAAAGG-AAAAAGCCATTAGCCTGGGCTAGTATAACAAACACAAAGCCACCTAGACAGCACTAAGTACCTCCGGGTTCAGCTCCTATGTTACACTGTGCTTTCTACTT i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3841147 191 + 4899514 tgatctgcctgcctcagtctcccagagtactgggattacaggtgtgagccac-ccgtgcctggcAGGATCCCATCTTTAATTTTTAAAAGG-AAAAAGCCATTAGCCTGGGCTAGTATAACAAACACAAAGCCACCTAGACAGCACTAAGTACCTCCGGGTTCAGCTCCTATGTTACACTGTGCTTTCTACTT i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012001120v1 3565356 191 - 3647740 tgatctgcctgcctcagtctcccaaagtactgggattacaggtgtgagccac-ccgtgcctggcAGGATCCCATCTTTAATTTTTAAAAGG-AAAAAGCCATTAGTCTGGGCTAGTATAACAAACACAAAGCCACCTAGACAGCACTGAGTACCTCCAGGTTCAGCTCCTATGTTACACTGTGCTTTCCACTT i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79699591 191 + 82825804 tgatctgcctgcctcagtctcccaaagtactgggattacaggtgtgagccac-ccgtgcctggcAGGATCCCATCTTTAATTTTTAAAAGG-AAAAAGCCATTAGCCTGGGCTAGTACAACAAACACAAAGCCACCTAGACAGCACTGAGTACCTCCGGGTTCAGCTCCTGTGTTACACTGTGCTTTCCACTT i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1662871 191 - 1768974 tgatctgcctgcctcagtctcccaaagtactgggattacaggtgtgagccac-ccatgcctggcAGGATCCCATCTTTAATTTTTAAAAGG-AAAAAGCCATTAGTCTGGGCTAGTATAACAAACACAAAGCCACCTAGACAGCACTGAGTACCTCCGGGTTCAGCTCCTATGTTACACTGTGCTTTCCACTT i manLeu1.NW_012103876v1 C 0 C 0 s colAng1.NW_012117422v1 146575 191 - 815015 tgatctgcctgcctcagcctcccaaagtactgggattacaggtgtgagccac-ccgtgcctggcAGGATCCCATCTTTCATTTTAAAAAGG-AAAAAGCCATTAGCCTGGGTTAGTATAACAAACGCAAAGCCACCTAGACAGCACTGAGTACCCCCAGGTTCAGCTCCTGTGTTACACTGTGCTTTCCACTT i colAng1.NW_012117422v1 C 0 C 0 s calJac3.chr2 140359539 189 - 204313951 ccatctgcctgcttcagcctcccaaagtgttgggattacaggcatgagtcac-ct-ctcccagcAGGATCCCATTTTTAATTTTAAAAAGG-AAAAAGCCATTAGCATGGGCTAGTGTAA-AAACACAAAGCCACCCAGATAGCACTGAGTGCCTCTGGGCTCAGCTCCTGTGTCACATTGTGCTCTCCACTG i calJac3.chr2 C 0 C 0 s cebCap1.NW_016108322v1 87429 189 + 99478 tgatctgcctgcttcagcctcccaaagtgttgggattacaggcatgagtcac-ct-cgcccggcAGCATCCCATTTTTAATTTTAAAAAGG-AAAAAGCCATTAGCATGGGCTAGTGTAA-AAACACAAAGCCACCCAGATAGCACTGAGTGCCCCTGGGCTCAGCTCCTGTGTCACATTGTGCTCTCCACTG i cebCap1.NW_016108322v1 I 1615 C 0 e saiBol1.JH378186 26775 2659 + 10068113 I e aotNan1.NW_018505037v1 2584946 3568 + 3417841 I a score=2503378.000000 s hg38.chr5_KI270795v1_alt 125911 358 + 131892 CTAAGACATGCTGTCATTTGTGTGCCTGTCTTCCGAGTTTACTTCCTGTGTATGCACTGGTGGAGGCTAAAG-GAATTCCATCTCGGATGAga----ggctagtcattctattttggatgctaagccaccaagtggaattctgattaaccccgttctggga-----tccaagatcgttccttgtgtaagggtaggtaaagaggtattccccgtaaatcggcacttaggacaaagtcgtaccc-attccctc-tgaagcacgggtgcccctcccctctagtatagaatccctgggtcttgagggggta-gacaccat-cttctctg-gccacagctcaggacatggatgtggcttctgctctcagg--ccctgttc s panTro5.chr5 3440494 357 - 181907262 CTAAGACGTGCTGTCATTTGTGTGCCTGTCTTCCGAGTTTACTTCCTATGTATGCACTGGTGGAGGCTAAAGAGAATTCCATCTCGGATGAga----ggctaatcattctattttggatgctaagccaccaggt-gaattctgattaaccccgttctggaa-tgtctccaagatcgtt-cttgtgtaagagtagggaaagaggtatt-cacgtaaatctgcacttagcaaagtgctgtaccc-att-cctc-tgaagcacgggtgcccctcccctctagtatagaatccctggatcttga-ggggta-gacaccat-cttctctg-gccacagc-caggacatggatgtggcttctgctctcagg--ccctgttc i panTro5.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 103164 363 + 152767 CTAAGTCGTGCTGTCGTTTGTGTGCCTGTCTTCCGAGTTTACTTCCTGTGTATGCACTGGGGGAGGCTAAAG-GAATTCCATCTCGGATGAga----ggctagtcattctatttcggatgctaag-cgccaagtgggattctgattaaccccgttctgggaatgtctccaagagcgttccttgtgtaagggtaggtaaggaggtattccccgtaaatctgcacttaggacaaagtcgtaccc-attccctcttgaagcacgggtgcccctcccctctagtatagaatccctgggtcttaagggggta-gacaccat-cttctctg-gccacagcccaggacatggatgtggcttctgctctcagg--ccctgttc i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160360034 363 - 163208435 CTAAGACGTGTTGTCATCTGTGTGCATGTCTTCCGAGTTTACTTCCTATGTATGCACTGGTGGAGACTAAAG-GAATTCCATCTTGGATGAga----ggctagtcattctattttggatgctaagccaccaagtggacttctgattaaccccgttctgggaacgtctccaagattattccctgtgtaagagcaggtaaggaggtattcaccgtaaatctgcacttaggacaaagtcgtaccc-attccctc-tgaggcacgggtgctcctcccctctagtatagaatccctgggtcttgagggagta-gacaccat-cttctctg-gccgcagcccgggacatggatgtggcttctgttctcagc--ccctgttc i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3632482 363 - 180051392 CTAAAACGTGCTGTCATTTGTGTGCATGTCTTCCAAGTTTACTTACTATGTATGCATTGGTGGAGGCCAAAG-GAATTCTATCTTGGATGAGA----AGCTGgtcattctattttggatgctaagccaccaagtggacttctgattaaccccgttctgggaatgtctccaagattgttccttgtgtaagagtaggtaagcagatactcactgtaaatctgcacttaggactaagtcgtaccc-attccctc-tgaagcacgggtgcccctcccctctagtatagaatccctgggtcttgaggggtta-gacaccat-cttctctg-gccacagcccaggacacggatgtggcttctgctgtcagg--ccctgttc i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3821560 363 - 181584905 CTAAAACGTGCTGTCATTTGTGTGCATGTCTTCCAAGTTTACTTACTATGTATGCATTGGTGGAGGCCAAAG-GAATTCTATCTTGGATGAGA----AGCTGGTCattctattttggatgctaagccaccaagtggacttctgattaaccccgttctgggaatgtctccaagattgttccttgtgtaagagtaggtaagcagatactcactgtaaatctgcacttaggactaagtcgtaccc-attccctc-tgaagcacgggtgcccctcccctctagtatagaatccctgggtcttgaggggtta-gacaccat-cttctctg-gccacagcccaggacacggatgtggcttctgctgtcagg--ccctgttc i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3841338 363 + 4899514 CTAAAACGTGCTGTCATTTGTGTGCATGTCTTCCAAGTTTACTTACTATGTATGCATTGGTGGAGGCCAAAG-GAATTCTATCTTGGATGAGA----AGCTGgtcattctattttggatgctaagccaccaagtggacttctgattaaccccgttctgggaatgtctccaagattattccttgtgtaagagtaggtaagcagatactcactgtaaatctgcacttaggactaagtcgtaccc-attccctc-tgaagcacgggtgcccctcccctctagtatagaatccctgggtcttgaggggtta-gacaccat-cttctctg-gccgcagcccaggacacggatgtggcttctgctgtcagg--ccctgttc i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012001120v1 3565547 368 - 3647740 CTAAAACGTGCTGTCATTTGTGTGCATGTCTTCCAAGTTTACTTACTATGTATGCATTGGTGGAGGCCAAAG-GAATTCTATCTCGGATGAGA----AGCTGGTCattctattttggatgctaagccaccaagtggacttctgattaaccccgttctgggaatgtctccaagattgttccttgtgtaagagtaggtaagcagatactcaccgtaaatctgcacttaggactaagtcgtaccctattccctc-tgaagcacgggtg-ccctcccctctagtatttgaatctggttctttgaggagttaggacactatgcttctctgcgccacaggcaggcaccaagatgtgacttctgctgtcaggcaccctgttc i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79699782 363 + 82825804 CTAAAACGTGCTGTCATTTGTGTGCTTGTCTTCCAAGTTTACTTACTATGTATGCACTGGTGGAGGCCAAAG-GAATTCTATCTCGCATGAGA----AGCTGGTCattctattttggatgctaagccaccaagtggacttctgattaaccccgttctgggaatgtctccaagactgttccttgtgtaagagtaggtaagcagatactcaccgtaaatctgcacttaggactaagtcgtaccc-attccctc-tgaagcacgggtgcccctcccctctagtatagaatccctgggtcttaaggggtta-gacactat-cttctctg-gccacagcctaggacacggatgtggcttctgctgtcagg--ccctgttc i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1663062 363 - 1768974 CTAAAATGTGCTGTCATTTGTGTGCATGTCTTCCAAGTTTACTTACTATGTATGCATTGGTGGAGGCCAAAG-GAATTCTATCTCGGATGAGA----AGCTGGTCattctattttggatgctaagccaccaagtggacttctgattaaccccgttctgggaatgtctccaagattgttccttgtgtaagagtaggtaagcagatactcaccgtaaatctgcacttaggactaagtcgtaccc-attccctc-tgaagcacaggtgcccctcccctctagtatagaatccctgggtcttgaggggtta-gacactat-cttctctg-gccacagcccaggacacagatgtggcttctgctgtcagg--ccctgttc i manLeu1.NW_012103876v1 C 0 C 0 s colAng1.NW_012117422v1 146766 366 - 815015 CTAAAACGTGCTGTCATTTGCGTGCATGTCTTCCAAGTTTACTTACTACGTATGCACTGGTGGAGGCTAAAG-GAACTCCATCTCGGATGAgaagctagctagtcattctattttggatgctaagcca-caagtggacttctgattaaccccattctgggaatgtctccaagattgttccttgtgtaagagtaggtaagcagatactcactgtaaatctgcatttaggactaagtcataccc-attccctc-tgaagcatgggtgcccctcccctctaatatagaatccctgggtcttgagggttta-gacaccat-cttctctg-gccacagcccaggacacggatgtggcttctgctgtcagg--ccctgttc i colAng1.NW_012117422v1 C 0 C 0 s calJac3.chr2 140359728 362 - 204313951 CTAAAATGTGCTGTCATTTGTGTGCATGTCTTGTGAGTTTACTTCCTATGCATGCACTGTTGGAGGCTAAAG-AAATTCTATCTCAGATGAga----ggctagacattctcttttggatgctaagccaccaagtggacttttgattaactccgttctgggaatgcctccgagctggttccttgtgtaagagtaggtaagtaggtacttactataaatctgcacttaaggcaaagtcctaccc-attccctc-tgaaacactggaacccctcccctccagtatagaactcttgagtcttgagggg-ca-ggcaccgt-cttgtctg-gccacagctcggggtacagatgtggcttctgctgtcaga--ccctgttt i calJac3.chr2 C 0 C 0 s cebCap1.NW_016108322v1 87618 362 + 99478 CTAAAACATGCTGTCATTTGTGTGCATGTCTTGTGAGTTTACTTCCTTTGCATGCATTGGTGGAGGCTAAAG-GAATTCTATCTCAGATGAga----agctagacattctcttttggatgctaagccaccaagtgaacttttgattaaccccgtcctgggaatgcctccgagctggttccctgtgtaagagcaggtaagtaggtacttactgtaaatctgcacttagggcaaagtcctaccc-cttccctc-tgaaacacgggaacccctcccctccagtatagaactgctgagtcttgaggga-ca-ggcactat-cttgtttg-gccacagctcggggcacagacgtggcttctgctgtcagg--ccctgttt i cebCap1.NW_016108322v1 C 0 C 0 s aotNan1.NW_018505037v1 2588514 361 + 3417841 CTAAAACGTGCCGTCATTTGTGTGCATGTCTTGTGAGTTTACTTCCTATGCATGCGCTGGTGGAGGCTAAAG-GAATTCTGTCTCAGAtgag-----ggctagacattctcttttggatgcttagccaccaagtggacttttgattaaccccgttctgggaatgcctccgagctggttccttgtgtaagagtaggtaagtaggtacttactgtaaatctgcacttagggcaaagccctatcc-attccctc-tgaaacacgggaactcctcccctccagtatagaactcctgagtcttgagggg-ca-ggcaccgt-cttgtctg-gccacagctcggggtacagatgtggcttctgctgtcagg--ccctgttt i aotNan1.NW_018505037v1 I 3568 C 0 e saiBol1.JH378186 26775 2659 + 10068113 I a score=-5026.000000 s hg38.chr5_KI270795v1_alt 126269 7 + 131892 aatg-ttt- s panTro5.chr5 3440851 7 - 181907262 agtg-ttt- i panTro5.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 103527 8 + 152767 aacgtttt- i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160360397 7 - 163208435 aatg-ttt- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3632845 6 - 180051392 aatg-tt-- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3821923 6 - 181584905 aatg-tt-- i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3841701 6 + 4899514 aatg-tt-- i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012001120v1 3565915 3 - 3647740 aa----t-- i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79700145 6 + 82825804 aatg-tt-- i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1663425 6 - 1768974 aatg-tt-- i manLeu1.NW_012103876v1 C 0 C 0 s colAng1.NW_012117422v1 147132 6 - 815015 aatg-tt-- i colAng1.NW_012117422v1 C 0 C 0 s calJac3.chr2 140360090 7 - 204313951 aatg-ct-t i calJac3.chr2 C 0 C 0 s aotNan1.NW_018505037v1 2588875 7 + 3417841 aata-tt-t i aotNan1.NW_018505037v1 C 0 I 32 e cebCap1.NW_016108322v1 87980 0 + 99478 C e saiBol1.JH378186 26775 2659 + 10068113 I a score=422.000000 s hg38.chr5_KI270795v1_alt 126276 1 + 131892 t s panTro5.chr5 3440858 1 - 181907262 t i panTro5.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 103535 1 + 152767 t i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160360404 1 - 163208435 t i nomLeu3.chr2 C 0 C 0 s calJac3.chr2 140360097 1 - 204313951 c i calJac3.chr2 C 0 C 0 e cebCap1.NW_016108322v1 87980 0 + 99478 C e saiBol1.JH378186 26775 2659 + 10068113 I e cerAty1.NW_012001120v1 3565918 0 - 3647740 C e macNem1.NW_012020287v1 3841707 0 + 4899514 C e rheMac8.chr6 3632851 0 - 180051392 C e macFas5.chr6 3821929 0 - 181584905 C e aotNan1.NW_018505037v1 2588882 32 + 3417841 I e colAng1.NW_012117422v1 147138 0 - 815015 C e manLeu1.NW_012103876v1 1663431 0 - 1768974 C e chlSab2.chr23 79700151 0 + 82825804 C a score=558395.000000 s hg38.chr5_KI270795v1_alt 126277 149 + 131892 taattgttttgttttgttttgttttttgagatggagtcttg-ctctgtcacccaggctggagtaca-gtggta-cgat-ctcggctca-c-tgcaacctctgcctcccag-attcaagcgattctc-ctgcctcagcctcctgagtagctgggatta s panTro5.chr5 3440859 148 - 181907262 taattgttttgttttgttttg-tttttgagatggagtctcg-ctctgtcacccaggctggagtaca-gtggta-cgatcctcggctcagc-tgcaacctctgcctcccag-attcaagcgattct--ctgcctcagcctcctgagtagct-ggatta i panTro5.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 103536 149 + 152767 taattgttttgttttgttttgttttttgaaatggagtcttg-ctctgtcacccaggctggagtacc-gtggta-cgat-ctcggctca-c-tgcaacctctgcctcccag-attcaagcgattctc-ctgcctcagcctcctgagtagctggggtta i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160360405 149 - 163208435 gttttgttttgttttgttttgttttttgagatggagtctcg-ctctgtcacccaggctggagtaca-gtggta-cgat-cttggctca-c-tgcaacctctgcctcccag-attcaagcgcttctc-ctgcctcagcctcctgagtagctgggattt i nomLeu3.chr2 C 0 I 4565 s rheMac8.chr6 3632851 132 - 180051392 ----------------ttttg-tttttgagatggagtctcg-ctctgtcacccaggctggaatgga-ctggtg-cgat-ctcagctca-c-tgcaacctctgcctcccag-attcaagcgattctc-ctggctcagcctcctgagtagctgggatta i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3821929 132 - 181584905 ----------------ttttg-tttttgagatggagtctcg-ctctgtcacccaggctggaatgga-ctggtg-cgat-ctcagctca-c-tgcaacctctgcctcccag-attcaagcgattctc-ctggctcagcctcctgagtagctgggatta i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3841707 132 + 4899514 ----------------ttttg-tttttgagatggagtctcg-ctctgtcacccaggctggaatgga-ctggtg-cgat-ctcagctca-c-tgcaacctctgcctcccag-attcaagcgattctc-ctggctcagcctcctgagtagctgggatta i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012001120v1 3565918 136 - 3647740 ----------------ttttg-tttttgagatggagtcttgcctctgtcacccaggctgagatggacctggcgatgat-ctcagctca-cgtgcaa-ctctgcctcctagtattcaacggattctcgctggctcagcctcctgagtagctggga-ta i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79700151 132 + 82825804 ----------------ttttg-tttttgagatggagtctcg-ctctgtcacccaggctggaatgga-caggtg-caat-ctcagctca-c-tgcaacctctgcctcccag-attcaagcgattctc-ctggctcagcctcctgagtagctgggatta i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1663431 132 - 1768974 ----------------ttttg-tttttgagatggagtcttg-ctctgtcatccaggctggaatgga-ctggtg-cgat-ctcagctca-c-tgcaacctctgcctcccag-attcaagcgattctc-ctggctcagcctcctgagtagctgggatta i manLeu1.NW_012103876v1 C 0 C 0 s colAng1.NW_012117422v1 147138 132 - 815015 ----------------ttttg-tttttgagatggagtctcg-ctctgtcatccaggctggaatgga-ctggtg-cgat-ctcagctca-c-tgcaacctctgtctcccag-attcaagcgattctc-ctgcctcagcctcctgagtagctgggatta i colAng1.NW_012117422v1 C 0 C 0 e cebCap1.NW_016108322v1 87980 0 + 99478 C e saiBol1.JH378186 26775 2659 + 10068113 I e calJac3.chr2 140360098 0 - 204313951 C e aotNan1.NW_018505037v1 2588882 32 + 3417841 I a score=39582.000000 s hg38.chr5_KI270795v1_alt 126426 13 + 131892 caggc-gtgag-cca s panTro5.chr5 3441007 13 - 181907262 caggc-gtgag-cca i panTro5.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 103685 13 + 152767 caggc-atgcg-cca i gorGor5.CYUI01000356v1 C 0 C 0 s rheMac8.chr6 3632983 13 - 180051392 caggt-gtgtg-cca i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3822061 13 - 181584905 caggt-gtgtg-cca i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3841839 13 + 4899514 caggt-gtgtg-cca i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012001120v1 3566054 15 - 3647740 caggtggtgtgccca i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79700283 13 + 82825804 caggt-gtgtg-cca i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1663563 13 - 1768974 caggt-gtgtg-cca i manLeu1.NW_012103876v1 C 0 M 5147 s colAng1.NW_012117422v1 147270 13 - 815015 taggt-gtgtg-cca i colAng1.NW_012117422v1 C 0 C 0 e cebCap1.NW_016108322v1 87980 0 + 99478 C e saiBol1.JH378186 26775 2659 + 10068113 I e nomLeu3.chr2 160360554 4565 - 163208435 I e calJac3.chr2 140360098 0 - 204313951 C e aotNan1.NW_018505037v1 2588882 32 + 3417841 I a score=27080.000000 s hg38.chr5_KI270795v1_alt 126439 10 + 131892 gcatgcctgg s panTro5.chr5 3441020 10 - 181907262 gcatgcctgg i panTro5.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 103698 10 + 152767 gcatgcctgg i gorGor5.CYUI01000356v1 C 0 C 0 s rheMac8.chr6 3632996 10 - 180051392 ccatgtctgg i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3822074 10 - 181584905 ccatgtctgg i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3841852 10 + 4899514 ccatgtctgg i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012001120v1 3566069 10 - 3647740 ccatgactgg i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79700296 10 + 82825804 ccatgtctgg i chlSab2.chr23 C 0 C 0 s colAng1.NW_012117422v1 147283 10 - 815015 ccatgcctgg i colAng1.NW_012117422v1 C 0 C 0 e cebCap1.NW_016108322v1 87980 0 + 99478 C e saiBol1.JH378186 26775 2659 + 10068113 I e nomLeu3.chr2 160360554 4565 - 163208435 I e calJac3.chr2 140360098 0 - 204313951 C e aotNan1.NW_018505037v1 2588882 32 + 3417841 I e manLeu1.NW_012103876v1 1663576 5147 - 1768974 M a score=168472.000000 s hg38.chr5_KI270795v1_alt 126449 53 + 131892 ctaatttttgtatttttggtagagatggggtttcattatgttgctcaggctgg s panTro5.chr5 3441030 50 - 181907262 ct-atttttgtattttgggtagagatggggtttcaccatg-tgctca-gctgg i panTro5.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 103708 53 + 152767 ctaatttttgtatttttggtagagatggggtttcactacattgctcaggctgg i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160365119 53 - 163208435 tttttttttttttttttttttgagacggaatctcgctctgttgcccaggctgg i nomLeu3.chr2 I 4565 M 933 s rheMac8.chr6 3633006 53 - 180051392 ctaatttttgtatttttagtagagacggggtttcaccatgttggtcaggctgg i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3822084 53 - 181584905 ctaatttttgtatttttagtagagacggggtttcaccatgttggtcaggctgg i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3841862 53 + 4899514 ctaatttttgtatttttagtagagacggggtttcaccatgttggtcaggctgg i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012001120v1 3566079 53 - 3647740 ctaatttttgtatttttagtagagacggggtttcaccatgttggtcaggctgg i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79700306 53 + 82825804 ctaatttttgtatttttagtagagacggggtttcaccatgttggtcaggctgg i chlSab2.chr23 C 0 C 0 s colAng1.NW_012117422v1 147293 53 - 815015 ctaatttttgtatttttactagagatggggtttcaccacgttggtcaggctgg i colAng1.NW_012117422v1 C 0 C 0 e cebCap1.NW_016108322v1 87980 0 + 99478 C e saiBol1.JH378186 26775 2659 + 10068113 I e calJac3.chr2 140360098 0 - 204313951 C e aotNan1.NW_018505037v1 2588882 32 + 3417841 I e manLeu1.NW_012103876v1 1663576 5147 - 1768974 M a score=249392.000000 s hg38.chr5_KI270795v1_alt 126502 84 + 131892 tctcgaactcctgaccttgtgatctgcctacctcggcctcccaaagtgttgggatgacaggtgtgagccacagtgcctggcctc s panTro5.chr5 3441080 82 - 181907262 tctcgaactcctgaccttgtgatccgcctacctcggcct-ccagagtg-tgggatgacaggtgcgagccacagtgcctggcctc i panTro5.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 103761 84 + 152767 tctcgaactcctgaccttgtgatctgcctacctcggcctcccaaagtgttgggatgacaggtgtgagccacagtgcctggcctc i gorGor5.CYUI01000356v1 C 0 C 0 s rheMac8.chr6 3633059 84 - 180051392 tctcaaactcctgacctcgtgatctgcccacctcagcctcccaaagtgctgggataacaggtgtgagccacagtgcctggcctc i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3822137 84 - 181584905 tctcaaactcctgacctcgtgatctgcccacctcagcctcccaaagtgctgggataacaggtgtgagccacagtgcctggcctc i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3841915 84 + 4899514 tctcaaactcctgacctcgtgatctgcccacctcagcctcccaaagtgctgggataacaggtgtgagccacagtgcctggcctc i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012001120v1 3566132 82 - 3647740 tctcgaactcctgacctcgtgatctgcccacgtcagcctcccaaagtgctgggataacag--atgagccacagtgcctggcctc i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79700359 82 + 82825804 tctcgaactcctgacctcgtgatctgcccacatcagcctcccaaagtgctgggataacag--gtgagccacagtgcctggcctc i chlSab2.chr23 C 0 C 0 s colAng1.NW_012117422v1 147346 84 - 815015 tctcaaactcctgacctcgtgatctgcccacctcagcctctcaaagtgctgggataacaggtgtgagccacagcgcctggccgc i colAng1.NW_012117422v1 C 0 C 0 e cebCap1.NW_016108322v1 87980 0 + 99478 C e saiBol1.JH378186 26775 2659 + 10068113 I e nomLeu3.chr2 160365172 933 - 163208435 M e calJac3.chr2 140360098 0 - 204313951 C e aotNan1.NW_018505037v1 2588882 32 + 3417841 I e manLeu1.NW_012103876v1 1663576 5147 - 1768974 M a score=33570.000000 s hg38.chr5_KI270795v1_alt 126586 8 + 131892 aatgtttc s panTro5.chr5 3441162 8 - 181907262 aatgtttc i panTro5.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 103845 8 + 152767 aatgtttc i gorGor5.CYUI01000356v1 C 0 C 0 s rheMac8.chr6 3633143 8 - 180051392 aatgtttc i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3822221 8 - 181584905 aatgtttc i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3841999 8 + 4899514 aatgtttc i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012001120v1 3566214 8 - 3647740 aatgtttc i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79700441 8 + 82825804 aatgtttc i chlSab2.chr23 C 0 C 0 s colAng1.NW_012117422v1 147430 8 - 815015 aatgtttc i colAng1.NW_012117422v1 C 0 C 0 s cebCap1.NW_016108322v1 87980 8 + 99478 aatgtttc i cebCap1.NW_016108322v1 C 0 C 0 e saiBol1.JH378186 26775 2659 + 10068113 I e nomLeu3.chr2 160365172 933 - 163208435 M e calJac3.chr2 140360098 0 - 204313951 C e aotNan1.NW_018505037v1 2588882 32 + 3417841 I e manLeu1.NW_012103876v1 1663576 5147 - 1768974 M a score=111011.000000 s hg38.chr5_KI270795v1_alt 126594 25 + 131892 tttttaagaaactgaatttttcagc s panTro5.chr5 3441170 24 - 181907262 -ttttaagaaactgaatttgtcagc i panTro5.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 103853 25 + 152767 tttttaagaaattgaatttgtcagc i gorGor5.CYUI01000356v1 C 0 C 0 s rheMac8.chr6 3633151 25 - 180051392 tttttaagaaactgaattggtcagc i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3822229 25 - 181584905 tttttaagaaactgaattggtcagc i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3842007 25 + 4899514 tttttaagaaactgaattggtcagc i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012001120v1 3566222 25 - 3647740 tttttaagaaactgaattggtcagc i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79700449 25 + 82825804 tttttaagaaactgaattggtcggc i chlSab2.chr23 C 0 C 0 s colAng1.NW_012117422v1 147438 25 - 815015 tttttaagaaactgaattggtcagc i colAng1.NW_012117422v1 C 0 C 0 s calJac3.chr2 140360098 25 - 204313951 tttctaagaaactggatttgtcagc i calJac3.chr2 C 0 I 6 s cebCap1.NW_016108322v1 87988 25 + 99478 tttctaagaaactggatttgtcagt i cebCap1.NW_016108322v1 C 0 I 6 e saiBol1.JH378186 26775 2659 + 10068113 I e nomLeu3.chr2 160365172 933 - 163208435 M e aotNan1.NW_018505037v1 2588882 32 + 3417841 I e manLeu1.NW_012103876v1 1663576 5147 - 1768974 M a score=92972.000000 s hg38.chr5_KI270795v1_alt 126619 21 + 131892 ctt------tggcctctcagcttcctt s panTro5.chr5 3441194 19 - 181907262 ttt--------gcctctcagcttcctt i panTro5.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 103878 21 + 152767 ctt------tggcctctcagcttcctt i gorGor5.CYUI01000356v1 C 0 C 0 s rheMac8.chr6 3633176 27 - 180051392 ctctttctttggcctcttagcttcctt i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3822254 27 - 181584905 ctctttctttggcctcttagcttcctt i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3842032 27 + 4899514 ctctttctttggcctcttagcttcctt i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012001120v1 3566247 27 - 3647740 ctctttctttggcctcttagcttcctt i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79700474 27 + 82825804 ctctttctttggcctcttagcttcctt i chlSab2.chr23 C 0 C 0 s colAng1.NW_012117422v1 147463 25 - 815015 ctctttctttggcctcttaggttcc-- i colAng1.NW_012117422v1 C 0 C 0 s calJac3.chr2 140360129 21 - 204313951 ------cgctggcctctcagcttcctc i calJac3.chr2 I 6 C 0 s cebCap1.NW_016108322v1 88019 21 + 99478 ------ctttggcctctcagcttcctc i cebCap1.NW_016108322v1 I 6 C 0 s aotNan1.NW_018505037v1 2588914 21 + 3417841 ------ctttggcctctcagcttcctc i aotNan1.NW_018505037v1 I 32 C 0 e saiBol1.JH378186 26775 2659 + 10068113 I e nomLeu3.chr2 160365172 933 - 163208435 M e manLeu1.NW_012103876v1 1663576 5147 - 1768974 M a score=1032542.000000 s hg38.chr5_KI270795v1_alt 126640 172 + 131892 ggactttggagtgggtttgcacaggcctgcccactacaaaacaGCGCTCTAACATACGCCATGCAAAAGTAAACATATAATCATTTTTAAACCTTTACATAATGTTTATTTTGCACATTTAAACACTTTAT-ATAAAGGGTATGATATATGGAAGTTGTTTTTTAAATAAAAA s panTro5.chr5 3441213 167 - 181907262 ggactttggagtgggtttgcacaggcctg-ccactacaaaacaGCCGTCTAACATATG-CATGCAAAAGTAAACATATAATCATTTTTTAACCTTTACATAATGTTTATTTTGCACATTTAAACACTT--T-ATAAAGGGTATGATATATGGAAGTTG-TTTTTAAATAAAAA i panTro5.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 103899 172 + 152767 ggactttggagtgggtttgcacaggcctgcccactacaaaacaGCGCTCTAACATATGCCATGCAAAAGTAAACATATAATCATTTTTAAACCTTTACATAATGTTTATTTTGCACATTTAAACACTTTAT-ATAAAGGGTATGATATATGGAAGTTGTTTTTTAAATAAAAA i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160366127 172 - 163208435 GGACTTTGGAGTGGGTTTGCACAGGCCTGTGCACTACAAAACAGTGCTCTAACATATACCATGCAAAAGTAAACATATAATCATTTTTAAACCTTTACATAATGTTTATTTTGCACATTTAAACACTTTAT-AAAAAGGGTATGATATATTGAAGTTGTTTTTTAAAGAAAAA i nomLeu3.chr2 M 933 C 0 s rheMac8.chr6 3633203 171 - 180051392 ggactttggagtggatttgcacaggcctgcccactgcgaatcaGCGCTCTAACATATACCATGCAGAAGTAAACATATAATCATTTTTAAACTTTTACATAATGTTTATTTTGCACATTTAAACACTTTAT-A-AAAGGATATGATATATTGAAGTTGTTTTTTAAAGAAAAA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3822281 171 - 181584905 ggactttggagtggatttgcacaggcctgcccactgcgaatcaGCGCTCTAACATATACCATGCAGAAGTAAACATATAATCATTTTTAAACTTTTACATAATGTTTATTTTGCACATTTAAACACTTTAT-A-AAAGGATATGATATATTGAAGTTGTTTTTTAAAGAAAAA i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3842059 171 + 4899514 ggactttggagtggatttgcacaggcctgcccactgcgaatcaGCGCTCTAACATATACCATGCAGAAGTAAACATATAATCATTTTTAAACTTTTACATAATGTTTATTTTGCACATTTAAACACTTTAT-A-AAAGGATATGATATATTGAAGTTGTTTTTTAAAGAAAAA i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012001120v1 3566274 171 - 3647740 ggactttggagtggatttgcacaggcctgcccactgcgaatcaGCGCTCTAACATATACCATGCAGAAGTAAACATATAATCATTTTTAAACTTTTACATAATGTTTATTTTGCACATTTAAACACTTTAT-A-AAAGGATATGATATATTGAAGTTGTTTTTTAAAGAAAAA i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79700501 171 + 82825804 ggactttggagtggatttacacaggcctgcccactgcgaatcaGCGCTCTAACATATACCATGCAGAAGTAAACATATAATCATTTTTAAACTTTTACATAATGTTTATTTTGCACATTTAAACACTTTAT-A-AAAGGATATGATATATTGAAGTTGTTTTTTAAAGAAAAA i chlSab2.chr23 C 0 C 0 s colAng1.NW_012117422v1 147488 167 - 815015 -----ttggagtgggtttgcacaggcctgcccactgcgaaacaGCGCTCTAACATATACCATGCAGAAGTAAACATAAAATCATTTTTAAACCTTTATATAATGTTTATTTTGCACATTTAAACACTTTATAA-AAAGGATATGATATATTGAAGTTGTTTTTTAAAGAAAAA i colAng1.NW_012117422v1 C 0 C 0 s calJac3.chr2 140360150 170 - 204313951 agactttggagtgggtttgcataggcctgcccaccTC-AAACAGCACTCTAACA-ATAACATGTAAAAGTAAACATATAATCATTTTTAAACCTTtaaataatgtttattttgcacatttaaacatcttat-ataaagggtatgatatattgaagttgttttttaaagaaaaa i calJac3.chr2 C 0 I 424 s cebCap1.NW_016108322v1 88040 166 + 99478 ggactttggagtgggtttgcataggcctgcccacctcaaaacaGCACTGTAACA-ATACCATGCAAAAGTAAACATATAATCATTTTT--ACCTTTAAATAATGTTTATTTTGCACATTTAAACACCTTAT-ATAAAGGGTATGATATATTGAAGTTG---TTTAAAGAAAAA i cebCap1.NW_016108322v1 C 0 C 0 s aotNan1.NW_018505037v1 2588935 170 + 3417841 ggactttggagtgggtttgcataggcctgcccaccTC-AAACAGCACTCTAACA-ATACCATGCAAAAGTAAACATATAATCATTTTTAAACGTTTAAATAATGTTTATTTTGCGCATTTAAACACCTTAT-ATAAAAGGTATGATATATTGAAATTGTTTTTTAAGGAAAAA i aotNan1.NW_018505037v1 C 0 C 0 e saiBol1.JH378186 26775 2659 + 10068113 I e manLeu1.NW_012103876v1 1663576 5147 - 1768974 M a score=669337.000000 s hg38.chr5_KI270795v1_alt 126812 111 + 131892 TTCTGATcaggcgcagtggctcatgcctgtaattgcagcactttgggaggctaaggc-aggtagatcatttgagaacaggagttcgagaccagactggccaacatggtgaaa s panTro5.chr5 3441380 106 - 181907262 TTCTGAT-Aggcgcagtggctcatg-ctgtaa-tgcagtactttgggaggctaaggc-aggtagatca-ttgagaacagga-ttcgagaccagactggccaacatggtgaaa i panTro5.chr5 C 0 I 2 s gorGor5.CYUI01000356v1 104071 111 + 152767 TTCTGATcaggcgcagtggctcatgcctgtagttgcagcactttgggaggctaaggc-aggtagatcatttgaggacaggagttcgagaccagcctggccaacatggtgaaa i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160366299 111 - 163208435 TTCTGATcaggcgcagtggctcatgcctgtaatcgcagcactttgggaggctgaggt-gggtagatcatttgaggacaggagttcgagaccagcctggccaacatggtgaaa i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3633374 111 - 180051392 TTCTggtcaggcgcagtggctcatgcctgcaattccagcactttgagaggctgaggt-gggtggatcatttgaggtcaggagttcgagactaacctggccaacatggtgaaa i rheMac8.chr6 C 0 I 1 s macFas5.chr6 3822452 111 - 181584905 TTCTggtcaggcgcagtggctcatgcctgcaattccagcactttgggaggctgaggt-gggtggatcatttgaggtcaggagttcgagactaacctggccaacatggtgaaa i macFas5.chr6 C 0 I 1 s macNem1.NW_012020287v1 3842230 111 + 4899514 TTCTggtcaggcgcagtggctcatgcctgcaattccagcactttgagaggctgaggt-gggtggatcatttgaggtcaggagttcgagactaacctggccaacatggtgaaa i macNem1.NW_012020287v1 C 0 I 1 s cerAty1.NW_012001120v1 3566445 111 - 3647740 TTCTggtcaggcgcagtggctcatgcctgcaattccagcactttgagaggctgaggt-gggtggatcatatgaggtcaggagttcgagactaacctggccaacatggtgaaa i cerAty1.NW_012001120v1 C 0 I 1 s chlSab2.chr23 79700672 111 + 82825804 TTCTggtcaggcgcagtggctcatgcctgcaattctagcactttgagaggctgaggt-gggtggatcatttgaggtcaggagttcgagactaacctggccaacatggtgaaa i chlSab2.chr23 C 0 I 1 s colAng1.NW_012117422v1 147655 111 - 815015 TTCTggtcaggcgcagtggctcatgcctgcaatcccagcactttgagaggctgaggc-gggtggatcatttgaggtcaggagtttgagactaacctggccaacatggtgaaa i colAng1.NW_012117422v1 C 0 I 1 s calJac3.chr2 140360744 112 - 204313951 TTTTggtcaggcatggtggctctcgcctgcaatcttagcactttgggaggctgaagcggggtggatcacctgaggtcaggagttcaagatcagcctggccaacatggtgaaa i calJac3.chr2 I 424 I 1 s cebCap1.NW_016108322v1 88206 111 + 99478 TTCTggccaggcaccgtggctcacacctgtaatcccagcactttgggaggctgaggc-aggtggatcatttgaggtcaggagtttgagaccagcctggccaacatggtgaaa i cebCap1.NW_016108322v1 C 0 I 1 s aotNan1.NW_018505037v1 2589105 111 + 3417841 TTCTggccaggcaccgtgactcacacctgtaatcccagcacgttgggaggctgaggc-aggtggatcatttaaggtcaggagtttgagaccaacctggccaacatggtgaaa i aotNan1.NW_018505037v1 C 0 I 1649 e saiBol1.JH378186 26775 2659 + 10068113 I e manLeu1.NW_012103876v1 1663576 5147 - 1768974 M a score=29587.000000 s hg38.chr5_KI270795v1_alt 126923 17 + 131892 cccatctcttctaaaaa--- s panTro5.chr5 3441488 12 - 181907262 cacatctctact-------- i panTro5.chr5 I 2 C 0 s gorGor5.CYUI01000356v1 104182 12 + 152767 cccatctctaca-------- i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160366410 14 - 163208435 cccatcactact---aa--- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3633486 13 - 180051392 cctgtctctact----a--- i rheMac8.chr6 I 1 C 0 s macFas5.chr6 3822564 14 - 181584905 cctgtctctact---aa--- i macFas5.chr6 I 1 C 0 s macNem1.NW_012020287v1 3842342 14 + 4899514 cctgtctctact---aa--- i macNem1.NW_012020287v1 I 1 C 0 s cerAty1.NW_012001120v1 3566557 14 - 3647740 cctgtctctact---tc--- i cerAty1.NW_012001120v1 I 1 C 0 s chlSab2.chr23 79700784 13 + 82825804 cctgtctctact----a--- i chlSab2.chr23 I 1 C 0 s colAng1.NW_012117422v1 147767 13 - 815015 cctgtctctact----a--- i colAng1.NW_012117422v1 I 1 C 0 s calJac3.chr2 140360857 17 - 204313951 cccatccctact---aaaaa i calJac3.chr2 I 1 C 0 s cebCap1.NW_016108322v1 88318 17 + 99478 cccgtctctact---aaaaa i cebCap1.NW_016108322v1 I 1 I 2098 e saiBol1.JH378186 26775 2659 + 10068113 I e aotNan1.NW_018505037v1 2589216 1649 + 3417841 I e manLeu1.NW_012103876v1 1663576 5147 - 1768974 M a score=17884.000000 s hg38.chr5_KI270795v1_alt 126940 17 + 131892 aaaaa-----------------------aaaaaaaaa---------aaa s panTro5.chr5 3441500 15 - 181907262 --aaa-----------------------aaaaaaaaa---------aaa i panTro5.chr5 C 0 C 0 s nomLeu3.chr2 160366424 17 - 163208435 aaaaa-----------------------aaaaaaaaa---------aaa i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3633499 24 - 180051392 aaaaa-----------------------aaataaaaataaaaat--aaa i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3822578 24 - 181584905 aaaaa-----------------------aaataaaaataaaaat--aaa i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3842356 23 + 4899514 aaaaa-----------------------aaataaaaataaaaa---aaa i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012001120v1 3566571 49 - 3647740 taaaacgtgctgtcatttgtgtgcatgtcaataaaaataaaaataaaaa i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79700797 26 + 82825804 aaaaa-----------------------aaataaaaataaaaataaaaa i chlSab2.chr23 C 0 C 0 s colAng1.NW_012117422v1 147780 10 - 815015 aaaaa-----------------------aa----------------aaa i colAng1.NW_012117422v1 C 0 C 0 s calJac3.chr2 140360874 14 - 204313951 ataaa-----------------------aataaaaaa------------ i calJac3.chr2 C 0 C 0 e cebCap1.NW_016108322v1 88335 2098 + 99478 I e saiBol1.JH378186 26775 2659 + 10068113 I e aotNan1.NW_018505037v1 2589216 1649 + 3417841 I e manLeu1.NW_012103876v1 1663576 5147 - 1768974 M e gorGor5.CYUI01000356v1 104194 0 + 152767 C a score=1815577.000000 s hg38.chr5_KI270795v1_alt 126957 384 + 131892 atacaaaaattagctgggtatggtagcatgcacctgtagtgccagctactctgg-----aggctaagagaattgcttgaacctgggagg-cggaggttgcagtgagccgagatctcaccattgcactccagcctgggcaacagaccaagactcggtctc--------aaaaaaaaaaaaaaaaTG---TTTttttt-a-aattcctgaaggacataacagaagtctggaagaaacgacaagacacaccttgtgtttggataagaaaattaaatattttaaaggtattgataattcttaca-tttcaatcattaaaagactgtagtgctggaactggaatagagaaactgattgatgaaaaagaatgaggagtccacagctgtccc----atatatatatatat--acaca s panTro5.chr5 3441515 385 - 181907262 atacaaaaattagct-ggtatggtagcatgcacctgtagt-ccagctactctgg--gctgagataagagaattgcttgaacctgggaggacggatgttgcagtgagccgagatctcaccattgcactccaacctgggcaacagacaagagctc-gtctc----------aaaaaaaaaaaaCATG---TTTTTTTT-A-AATTCCTGAAGGACATAACAGAAGTCTGGAAGAAACGACAAGACACACCTTGTGTTTGGATAAGAAAATTAAATATTTTAAAGGTATTGATAATTCTTACA-TTTCAATCATTGAAAGACTGTGGTGCTGGAAGTGGAATAGAGAAACTGATTGATGAAAAAGAATGAGGAGTCCACAGCTGTCCC----atatatatatatatacacaca i panTro5.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 104194 348 + 152767 ---------------------ggtagcatgcacctgtagtcccagctactctggaggctgagataagagaattgcttgaacctgggagg-cggaggttgcagtgagccgagatctcaccattgcactccagcctggacaacagaccaagactcggtctc--------aaaaaaaaaaaaaaaaTG---TTTTTTTTAA-AATTCCTGAAGGACAT-----AAGTCTGGAAGAAACGACAAGACACACCTTGTGTTTGGATAAGAAAATTAAATATTTTAAaggtatcgataattcttaca-tttcgatcattaaaagactgtggtgctggaactggaatagagaaactgattgatgaaaaagaatgaggagtccacagctgtccc----ata------------------ i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160366441 394 - 163208435 atgcagaaattagccgggtatggtagcatgcacctgtagtcccagctactctggaggctgagatgacagaattgcttgaacctgggagg-cagaggttgcagtgagccgagatctcaccactgcactccagcctgggcaacagaccaagactcggtctc--------aaaaaaaaaaaagaaaTGTGTTTTTTTTT-C-AATTCCTGAAGGACATAAGAGAAGTCTGGAAGAAACAACAAGACACACCTTGTATTTGGATAAGAAAATTACATATTTTAAaggtatcgataattcttaca-tttcaatcattaaaagactgtggtgctggaactggaatagagaaactgattgatgaaaaagaatgaggagtccacagctgtccc----atatatatatATAtgtgtgtg i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3633523 384 - 180051392 atacaaaaagtagccaggtttggtagcatgcacctgtagccccagctgctctggaggctgagacaagagaattgcttgaacctgggagg-cggaggttgcagtgagccaagatctcaccactgcactccagcctgggagacagagcaagactcgatctc-----aaaaaaaaaaaaaaaaaGATTTGTGTTTTTTT-A-AATTCCTGAAGGACATAAGAGAAGTCTGGAAGAAACGACAAGACACACCTTGTGTTTGGATAAGAAAATTAAACATTTTAAAGGTATCGATAATTCTTACATTTTCAATCATTAAAACACTGTGGTGCT-GAACTAGAATAGAGAAAC----TGATGAAAAAGAATGAGGAGTCCACAGCTGTCCCatatatatatat------------- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3822602 378 - 181584905 atacaaaaagtagccaggtttggtagcatgcacctgtagtcccagctgctctggaggctgagacaagagaattgcttgaacctgggagg-cggaggttgcagtgagccaagatctcaccactgcactccagcctgggagacagagcaagactcgatctc-------aaaaaaaaaaaaaaaGATTTGTGTTTTTTT-A-AATTCCTGAAGGACATAAGAGAAGTCTGGAAGAAACGACAAGACACACCTTGTGTTTGGATAAGAAAATTAAACATTTTAAAGGTATCGATAATTCTTACATTTTCAATCATTAAAACACTGTGGTGCT-GAACTAGAATAGAGAAAC----TGATGAAAAAGAATGAGGAGTCCACAGCTGTCCC----atatatat------------- i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3842379 380 + 4899514 atacaaaaagtagccaggtttggtagcatgcacctgtagtcccagctgctctggaggctgagacaagagaattgcttgaacctgggagg-cggaggttgcagtgagccaagatctcaccactgcactccagcctgggagacagagcaagactcgatctc-----aaaaaaaaaaaaaaaaaGATTTGTGTTTTTTT-A-AATTCCTGAAGGACATAAGAGAAGTCTGGAAGAAACGACAAGACACACCTTGTGTTTGGATAAGAAAATTAAACATTTTAAAGGTATCGATAATTCTTACATTTTCAATCATTAAAACACTGTGGTGCT-GAACTAGAATAGAGAAAC----TGATGAAAAAGAATGAGGAGTCCACAGCTGTCCC----atatatat------------- i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012001120v1 3566620 381 - 3647740 atacaaaaagtagccgggtttggtagcatgcacctgtagtcccagctgctctggaggctgagacaagagaattgcttgaacctgggagg-cggaggttgcagtgagccaagatctcaccactgcactccagcctaggagacagagcaagactcagtctc--aaaaaaaaaaaaaaaaaaaaGATT--TTTTTTTTT-A-AATTCCTGAAGGACATAAGAGAAGTCTGGAAGAAACAACAAGACGCACCTTGTGTTTGGATAAGAAAATTAAACATTTTAAAGGTATCGATAATTCTTACATTTTCAATCATTAAAACACTGTGGTGCT-GAACTAGAATAGAGAAAC----TGATGAAAAAGAATGAGGAGTCCACAGCCGTCCC----atatatat------------- i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79700823 396 + 82825804 gtacaaaaagtagccgggtttggtagcatgcacctgtagtcccagctactctggaggctgagacaagagaattgcttgaacccgggagg-cggaggttgcagtgagccaagatctcaccactgcactccagcctgggagacagagcaagactcggtctcaaaaagaaaaaaaaaaaaaaaaGATTTGTTTTTTTTT-A-AATCCCTAAAGGACATAAGAGAAGTCTGGAAGAAACGACAAGACACACCTTGTGTTTGGCTAAGAAAATTAAACATTTTAAAGGTATCGATAATTCTTACATTTTCAATCATTAAAACACTGTGGTGCT-GAACTAGAATAGAGAAAC----TGATGAAAAAGAATGAGGAGTCCACAGCTGTCCC----atatatatatatacacaca-- i chlSab2.chr23 C 0 I 32 s colAng1.NW_012117422v1 147790 393 - 815015 aaaaaaaaattagccggttatggtagcgtgcacctgtagtcccagctactctggaggctgagacaagagaattgcttgaacctgggagg-cggaggttgtagtgagccaagatctcaccactgcactccagcctgggagatagagcaagactcggtctc-acaaaaaaaaaaaaaaaaaaaGATT--TGGTTTTTT-A-AATTCCTGAAGGACATAAGAGAAGTCTGGAAGAAACGACAAGACACACCTTGTGTTTGGATAAGAAAATTAAACATTTTAAAGGTATCGATAATTCTTACATTTTCAATCATTAAAACACTGTGGTGCT-GAACTAGAATAGAGAAAC----TGATGAAAAAGAATGAGGAGTCCACAGCTGTCCC----atatatatatatatacaca-- i colAng1.NW_012117422v1 C 0 C 0 s calJac3.chr2 140360888 380 - 204313951 -tacaaaaattagctggctatggtggcatgcacctgtagtcccagctactctagaggctgaggcaagaaacttgcctgaacctgggagg-cggaggttgccatgagccttgaccttgccactgcactcaagcctggacaacagagcaagactccgtctc-----------------aaaaaaaTCTTTTTTTTTTT-T-AATTCCtgaaggacataagagaagtctggaagaaacgacaagacataccttgtgtttggataagaaaattagacattttaaaggtatcaataattcttaca-ttTCAATCATTAAAACACTGTGGTGCTGGAACTGGAAAGGAGAAATTGATTGATGAAAAAGAATGAGGAGTCCTTGGCTGTCCC----ATATATACATACATACT---- i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 29434 374 + 10068113 ataCaaaaattagccaagtatggtggcatgca--------cccagctactctagaggctgagacaagagacttgcctgaacctgggagg-aggaggttgcagtgagccttgaccttgccactgctctcaagcctggacaacacagcaagattccatctc-----------------aaaaaaaTCTTTTTTTTTTT-TCAATTCCTGAAGGACATAAGAGAATTCTGGAAGAAACGACAAGACACATCTTGTGTTTGGATAAGAAAATTAGACATTTTAAAGGTATCTATAATTCTTACA-TTTCAATCATTAAAACACTGTGGTGCTGGAACTGGAAAGGAGAAACTGATTGATGAAAAAGAATGAGGAGTCCTCGGCTGTCCC----ATATATACATACATACA---- i saiBol1.JH378186 I 2659 C 0 e cebCap1.NW_016108322v1 88335 2098 + 99478 I e aotNan1.NW_018505037v1 2589216 1649 + 3417841 I e manLeu1.NW_012103876v1 1663576 5147 - 1768974 M a score=-32929.000000 s hg38.chr5_KI270795v1_alt 127341 64 + 131892 tcgg----tatatatatatatacacatctgtata------------tatatatatatatctgtatatatatacacatc------------------------------------------------------------------------------------tg s panTro5.chr5 3441900 164 - 181907262 tcggtctatatatatatatatacacatctatatatatatacatctgtatatatatacatctgtgtatatatacacatctgtatatatatatacatctgtgtatatatatacatctgtgtatatatatacactttttatctatatatataCACGCCACAGCCGTG i panTro5.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 104542 18 + 152767 ----------------------------------------------tatatatatacatctg----------------------------------------------------------------------------------------------------TA i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160366835 80 - 163208435 tgtgtgtgtgtgtgtgtgtgtgtatatatatgtatatatatgtgtgtatatatatgtgtgtatatatgtatgtatata------------------------------------------------------------------------------------tg i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3633907 31 - 180051392 -----------------------------------------------atatatatatataCACACACACACACATATA-------------------------------------------------------------------------------------- i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3822980 31 - 181584905 -----------------------------------------------atatatatatatacacacacacacacatata-------------------------------------------------------------------------------------- i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3842759 31 + 4899514 -----------------------------------------------atatatatacacacacacacacacacatata-------------------------------------------------------------------------------------- i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012001120v1 3567001 13 - 3647740 -----------------------------------------------------------------acacacacatata-------------------------------------------------------------------------------------- i cerAty1.NW_012001120v1 C 0 C 0 s colAng1.NW_012117422v1 148183 14 - 815015 ------------------------------------------------tatatatataaata------------------------------------------------------------------------------------------------------ i colAng1.NW_012117422v1 C 0 C 0 e cebCap1.NW_016108322v1 88335 2098 + 99478 I e saiBol1.JH378186 29808 0 + 10068113 C e calJac3.chr2 140361268 0 - 204313951 C e aotNan1.NW_018505037v1 2589216 1649 + 3417841 I e manLeu1.NW_012103876v1 1663576 5147 - 1768974 M e chlSab2.chr23 79701219 32 + 82825804 I a score=1700230.000000 s hg38.chr5_KI270795v1_alt 127405 335 + 131892 tatatatatatGAGAACTCAGTATATGAAAAATTATGATTTT-ACAAATCAATAGGGTGAAGTTTGACGATTAAGTAAATAACAATGGAATAACTAATTAGCTGATTGAGGGAAATTGCATGACTATTTTGCTGCACATAGCAAAATAAATTTCAGGTGATTCAAGTTGTAGCCTTTTGATCCAAATAATAAAGAAAAC-----------------ATAGATCAAACCACTAAAAACAGAtttctcacccggggctcttcatctgaaccacacaacacagaaaatgaactgagtgactaatttctaaaacatctaccagttctacaaaactggtgtcattctagatgtttcag s panTro5.chr5 3442064 320 - 181907262 TATATATATATGAGAACTCAGTATATGAAAAATTATGATTTTAACAAATCAA-AGGGTGAAGTTTGACG-TTAAGT-AATAACAATGGAATAACTAATTAGCTGATTGAGGG-AATTGCATGACTATTTTGCTGCACATAGCAAAATAAATTTCAGGTGATTCAAGTTGTAGCCTTTCGATCCAACTAATAAAGAAAAC-----------------ATAGATCAAACCACT-AAAACAGAtttctc-cccggggctcttcatctg-accacac------gaaaatgaactgagtgactaa-ttctaaaa-atctaccagttctacaaaactggtg-cattctagatgtttcag i panTro5.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 104560 335 + 152767 TATATATATATGAGAACTCAGTATATGAAAAATTATGATTTT-ACAAATCAATAGGGTGAAGTTTGACAATTAAGTAAACAACAATGGAATAACTAATTAGCTGATTGAGGGAAATTGCATGACTATTTTGCTGCACATAGCAAAATAAATTTCAGGTGATTCAAGGTGTAGCCTTTTGATCCAAATAATAAAGAAAAC-----------------ATAGATCAAACCACTAAAAACAGAtttctcacccagggctcttcatctgaacaacacaacacagaaaatgaactgagtgactaatttctaaaacatctaccagttctacaaaactggtgtcattctagatgtttaag i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160366915 331 - 163208435 tatatatatGAGAGAACTCAGTATATGAAAAATTATGATTTT-ACAAATCAATAGGGTGAAGTTTGATGATTAAGTAAATAACAATGGAATAACTAATTAGCTGATTGAGGGAAATTGCATGACTATTTTGCTGCACATAGCAAAATAAATTTCAGGTGATTCAAGGTGTAACATTTTGATCCAAATAAT----AAAAC-----------------ATAGATCAAACCACTAAAAACAGAtttctcacctggggctcttcatctgaaccacacaacacagaaaatgaactgagtgactaatttctaaaacatctaccagttctacaaaactggtgtcattctagatgtttaag i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3633938 333 - 180051392 TATATAAAAATAAGAACTCAGTATATGAAAAATTATGATTTT-ACAAATCAGTAGGGTGAAGTTTGACTATTAAGTAAATGACATTGGAATAACTAATTAGCTGATTGAGGGAAACTGCAAGACTATTTTGCTGCACAGAGCAAAATAAATTTCAGGTGATTCAAGGCATAACATTTTGATCCAAATAATAAAGAAAAC-------------------AGATCAAACCACTAAAACCAGAtttctcacctggggctcttcatctgaaccacataacacagaaaatgaactgagtgactgatttctaaaacatctaccagttctacaaaactggtgtcattctagatgtttaag i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3823011 333 - 181584905 tatataaaaataAGAACTCAGTATATGAAAAATTATGATTTT-ACAAATCAGTAGGGTGAAGTTTGACTATTAAGTAAATGACATTGGAATAACTAATTAGCTGATTGAGGGAAACTGCAAGACTATTTTGCTGCACAGAGCAAAATAAATTTCAGGTGATTCAAGGCATAACATTTTGATCCAAATAATAAAGAAAAC-------------------AGATCAAACCACTAAAACCAGAtttctcacctggggctcttcatctgaaccacataacacagaaaatgaactgagtgactgatttctaaaacatctaccagttctacaaaactggtgtcattctagatgtttaag i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3842790 333 + 4899514 tatataaaaataAGAACTCAGTATATGAAAAATTATGATTTT-ACAAATCAGTAGGGTGAAGTTTGACTATTAAGTAAATGACATTGGAATAACTAATTAGCTGATTGAGGGAAACTGCAAGACTATTTTGCTGCACAGAGCAAAATAAATTTCAGGTGATTCAAGGCATAACATTTTGATCCAAATAATAAAGAAAAC-------------------AGATCAAACCACTAAAACCAGAtttctcacctggggctcttcatctgaaccacataacacagaaaatgaactgagtgactgatttctaaaacatctaccagttctacaaaactggtgtcattctagatgtttaag i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012001120v1 3567014 333 - 3647740 tatataaaaataAGAACTCAGTATATGAAAAATTATGATTTT-ACAAATCAGTAGGGTGAAGTTTGACTATTAAGTAAATGACATTGGAATAACTAATTAGCTGATTGAGGGAAACTGCAAGACTATTTTGCTGCACAGAGCAAAATAAATTTCAGGTGATTCAAGGCATAACATTTTGATCCAAATAATAAAGAAAAC-------------------AGATCAAACCACTAAAACCAGAtttctcacctggggctcttcatctgaaccacataacacagaaaatgaactgagtgactgatttctaaaacatctaccagttctacaaaactggtgtcattctagatgtttaag i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79701251 333 + 82825804 tatataaaaataAGAACTCAGTATATGAAAAATTATGATTTT-ACAAATCAGTAGGGTGAAGTTTGACTATTAAGTAAATGACATTGGAATAACTAATTAGCTGATTAAGGGAAACTGCAAGACTATTTTGCTGCACAGAGCAAAATAAATTTCAGGTGATTCAAGGCATAACCTTTTGATCCAAATAATAAAGAAAAC-------------------AGATCAAACCACTAAAACCAGAtttctcacctggggctcttcatctgaaccacataacacagaaaatgaactgagtgactgatttctaaaacatctaccagttctacaaaactggtttcattctagatgtttaag i chlSab2.chr23 I 32 C 0 s colAng1.NW_012117422v1 148197 321 - 815015 ------------AGAACTCAGTATATGAAAAATTATGATTTT-ACAAATCAGTAGGGTGAAGTTTGACTATTAAGTAAATGACATTGGAATAACTAATTAGCTGATTGAGGGAAACTGCAGGACTACTTTGCTGCACAGAGCAAAATAAATTTCAGGTGATTCAAGGCATAACCTTTTGATCCAAATAATAAAGAAAAC-------------------AGATCAAACCACTAAAAACAGATAtctcacctggggctcttcatctgaaccacacaacgcagaaaatgaactgagtgactgatttctaaaacatctaccagttctacaaaacgggtgtcattctagatgtttaag i colAng1.NW_012117422v1 C 0 C 0 s calJac3.chr2 140361268 336 - 204313951 ------------AGAACTCAGTGTATGAAAAATT---ATTTT-ATGAATCAATGGGGTGATGTTTGACTATTAAGTAAATGACACTGGAATAACTATTTAGCTGATTGAAGGAAATTCCATGACTATTTTGCTGCACACAGCAAAATAAATTTTAGGTGATTCAAAGCATAACATTTTGATCCAAATAATAAAGAAAAT-AAAATAATAAAGTGGAATAGATGAAACCACTAAAAACAGGtttcccacctgggtttcctcatctgaaccacacaacacagaaaatgaactgagttactaatttctaaaacatctaccagttctacaaaacagataccatgctggatgtttaag i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 29808 340 + 10068113 ------------AGAACTCAGTATATGAAAAATTGTGATTTT-ATGAATCAATGGGGTGACGTCTGACTATTAAGTAAATGACACTGGAATAACTATTTAGCTGATTGAAGGAAATTCCATGACTATTTTGCTGCACATAGCAAAATAAATTTCAGGTGATTCAAAGCATAACATTTTGATCCaaataataaagaaaataaaaataataaaGTGGGATAGATGAAACCACTAAAAACAGAtttcccacctgggtgtcctcatctgaaccgaacaacacagaaaatgaactgagtgactaatttctaaaacatctaccagttctacaaaacaggtacgattctagatgtttaag i saiBol1.JH378186 C 0 C 0 e cebCap1.NW_016108322v1 88335 2098 + 99478 I e aotNan1.NW_018505037v1 2589216 1649 + 3417841 I e manLeu1.NW_012103876v1 1663576 5147 - 1768974 M a score=1212585.000000 s hg38.chr5_KI270795v1_alt 127740 194 + 131892 acagaag-ttaatgccttacatacaacaggtgtcggaaattcgtgttaattctctcaggaaaacttcactgcgaaaggctAAAAGACAAATAACCAACTTTAAAAAATAGTTGCAATGTGTggccaggcgtggtggctcatgcctgtagtcccaacactttgggaggccgaggccagtggattgcttgagctcac s panTro5.chr5 3442384 191 - 181907262 acagaggattaatgccttacatacaacaggtgtcggaaattcgtgttaattctctcaggaaaACTTCACTGC-AAAGGCTAAAAGAC-AATAACCGACTGT-AAATATAGTTGCAACATGTggccaggcgtggtagctcatgcctgtagtcccagcactttgggaggccga-gccactggattgcttgagctcac i panTro5.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 104895 194 + 152767 acagaag-ttaatgccttacatacgacaggtgtaggaaattagtgttaattctctcaggaaaacttcactgagaaaggctAAAAGACAAATAACCAACTGTAAAAAATAGTTGCAACATGTggccaggcgtggtggctcatgcctgtagtcccagcactttgggaggccgaggccagtggattgcttgagctcac i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160367246 194 - 163208435 acagaag-ttaatgccttacatacaacaggtgtaggaaattagtgttaattctctcaggaaaacttcactgagaaaggctAAAAGACAAACAACCAACTGTAAAAAATAGTTGCAACATGTggccaggtgtggtggctcatgcctgtagtcccagcactttgagaggccaaggccagtggattgcttgagctcac i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3634271 194 - 180051392 acagaag-ttaatgccttacatacaacaggtgtaggaaatcagtgttaattctctcaggaaactgtcactgagaaaggctAAAAGACAAATAACCACCTGTCGAAAATAGTTGCAACATGTggcccggcgtggtggctcatacctgtagccccagcactttgggaggccgaggccagtggattgcttgagctcac i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3823344 194 - 181584905 acagaag-ttaatgccttacatacaacaggtgtaggaaatcagtgttaattctctcaggaaactgtcactgagaaaggctAAAAGACAAATAACCACCTGTCAAAAATAGTTGCAACATGTggcccggcgtggtggctcatacctgtagccccagcactttgggaggccgaggccagtggattgcttgagctcac i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3843123 194 + 4899514 acagaag-ttaatgccttacatacaacaggtgtaggaaatcagtgttaattctctcaggaaactgtcactgagaaaggctAAAAGACAAATAACCACCTGTCAAAAATAGTTGCAACATGTggcccggcatggtggctcatacctgtagccccagcactttaggaggccgaggccagtggattgcttgagctcac i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012001120v1 3567347 194 - 3647740 acagaag-ttaatgccttacatacaacaggtgtaggaaatcagtgttaattctctcaggaaactgtcactgagaaaggctAAAAGACAAATAACCATCTGTCAAAAATAGTTGCAACATGTggcccggcgtggtggctcatacctgtagccccagcactttgggaggccgaggccagtggattgcttgagctcac i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79701584 194 + 82825804 acagaag-ttaatgccttacatacaacaggtgtaggaaatcagtgttaattctctcaggaaactgtcactgagaaaggctAAAAGACAAATAACCACCTGTCAAAAATAGTTGCAACATGTggcccggcgtggtggctcatacctgtagccccagcactttgggaggccgaggccagtggattgcttgagctcac i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1668726 194 - 1768974 ACagaag-ttaatgccttacatacaacaggtgtaggaaatcagtgttaattctctcaggaaactgtcactgagaaaggctAAAAGACAAATAACCACCTGTCAAAAATAGTTGCAACATGTggcctggcgtggtggctcatatctgtagccccagcactttgggaggccgaggccagtggattgcttgagctcac i manLeu1.NW_012103876v1 M 5147 C 0 s colAng1.NW_012117422v1 148518 194 - 815015 acagaag-tcaatgccttccatacaacacgtagaggaaatcagtgttaattctctcaggtaactgtcactgagaaaggctAAAAGACAAATAACCACCTGTCAAACGTAGTTGCAACATGTggcccggcgcggcggctcatacctgtagccccagcactttgagaggccgaggccagtggattgcttgagctcac i colAng1.NW_012117422v1 C 0 C 0 s calJac3.chr2 140361604 192 - 204313951 acagaag-ttaattccttacatacaacaggtgtagggaattagtgctaattctctcaggaaaccgtcactgagaaaggctAAAAGACAAATAACCAACTGTCAAAAATCGTTGCAACATGTggctgggctcggt-gctcatgcctgtaat-ccagcactttgggaggccacgcccggtggattgcttcagctcag i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 30148 193 + 10068113 acagaat-ttaattccttacatacaacaggtgtagggaattagtgctaattctctcaggaaaccttcattgagaaaggctAAAAGACAAATAGCCAACTGTCAAAAATAGTTGCAATATGTggccgggctcggt-gctcacgcctgtagtcccagcactttgggaggccaagcccggtggattgcttgagctcag i saiBol1.JH378186 C 0 C 0 e cebCap1.NW_016108322v1 88335 2098 + 99478 I e aotNan1.NW_018505037v1 2589216 1649 + 3417841 I a score=1464414.000000 s hg38.chr5_KI270795v1_alt 127934 213 + 131892 aagttccagaccagcctggcccacatagtaaaaccccatctctactaaaaacacaaaaattagtcgggcatggcagcgtgcatctgtagcctcagctacttgggagactgaggcaggagaatcgcttgaacccggaaggcagaggttgcagtgaaccgagatagtgccactggactgcagcctggatgacaaagtgagacta-tgtctc-------------------------aaaaa s panTro5.chr5 3442575 210 - 181907262 aagttccagaccagcctgg-ccacatagtaaaaccccatctctactaaaaacacaaaaattagtcgggcatggcagcgtgcatctgtagcctcagctacttgggagactgaggcaggac-atcgcttgaacccggaaggcagacgttgcagtgaaccgagatagtgccactggactgcagcctggatgacaaagcgagacta-tgtctc--------------------------aaaa i panTro5.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 105089 213 + 152767 aagttccagaccagcctggcccacatagtaaaaccccatctctactaaaaacacaaaaagtagtcgggcatggcagcgtgcatctgtagccccagctatttgggagactgaggcaggagaatcgcttgaacccagaaggcagaggttgcagtgaaccgagatggtgctactggactgcagcctggatgacaaagcgagacta-tgtctc-------------------------aaaaa i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160367440 212 - 163208435 aaattccacaccagcctggcccacatagtaaaaccctgtctctactaaaaacacaaaaattagtcgggcatggcagcgtgcatctgtagccccagctacttgggagaatgaggcaggagaatcgcttgaacccgggaggcagaggttgcagtgaactgagatggtgccactggactgcagcctggatgacaaagcaagacta-tgtctc--------------------------aaaa i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3634465 206 - 180051392 aagttccagaccagcctggcccacacagtgaaacctc-------ctaaaaatacaaaaattagtcgggcatggcagtgtgcatctgtagccccagctacctgggagactgaggcaggagaatcgcttgaacccgggaggcagagcttgcagtgagctgagatggtgccactgcactccagcctggacgacaaagcgagacta-tgtctc-------------------------aaaaa i rheMac8.chr6 C 0 I 1 s macFas5.chr6 3823538 206 - 181584905 aagttccagaccagcctggcccacacagtgaaacctc-------ctaaaaatacaaaaattagtcgggcatggcagtgtgcatctgtagccccagctacttgggagactgaggcaggagaatcgcttgaacccgggaggcagagctcgcagtgagctgagatggtgccactgcactccagcctggacgacaaagcgagacta-tgtctc-------------------------aaaaa i macFas5.chr6 C 0 I 1 s macNem1.NW_012020287v1 3843317 231 + 4899514 aagttccagaccagcctggcccacacagtgaaacctc-------ctaaaaatacaaaaattagtcgggcatggcagtgtgcatctgtagccccagctacttgggagactgaggcaggagaatcgcttgaacccgggaggcagagcttgcagtgagctgagatggtgccactgcactccagcctggacgacaaagcgagacta-tgtctcaaaaataaataaataaataaaaaaaaaaaa i macNem1.NW_012020287v1 C 0 I 1 s cerAty1.NW_012001120v1 3567541 208 - 3647740 aagttccagactagcctggcccacacagtgaaacccc-------ctaaaaatacaaaaattagtcgggcatggcagtgtgcatctgtagccccagctacttgggagactgaggcaggagaatcgcttgaacccgggaggcagagcttgcagtgagctgagatggtgccactgcactccagcctggacgacaaagcgagacta-tgtctc-----------------------aaaaaaa i cerAty1.NW_012001120v1 C 0 I 1 s chlSab2.chr23 79701778 206 + 82825804 aagttccagaccagcctggcccacacagtgaaacccc-------ataaaaatacaaaaattagtcgggcatggcagtgtgcatctgtagccccagctacttgggagactgaggcaggagaatcgcttgaacccgggaggcagagcttgcagtgagctgagatggtgccactgcactccagcctggatgacaaaacgagacta-tgtctc-------------------------aaaaa i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1668920 206 - 1768974 aagttccagaccagcctggcccacacagtgaaacccc-------ctaaaaatacaaaaattagtcaggcatggcagcatgcatctgtagccccagctacttgggagactgaggcaggagaatcgcttgaatctgggaggcagagcttgcagtgagctgagatggtgccactgcactccagtctggacgacaaagcgagacta-tgtctc-------------------------aaaaa i manLeu1.NW_012103876v1 C 0 I 511 s colAng1.NW_012117422v1 148712 213 - 815015 aagttccagaccagcctggcccacacagtgaaaccccatctctactaaaaatacaaaaattagtcgggcatggcagcgtgcatctgtagccccagctacttgggagactgaggcaggagaatcgcttgaacccaggaggcagagcttccagtgagctgagatggtgccactgcactccagcctggatgacaaagcgagacta-tgtctc-------------------------aaaaa i colAng1.NW_012117422v1 C 0 C 0 s calJac3.chr2 140361796 198 - 204313951 aagttccagaccagcctggcccacatagcgaaaccccatctctactaaaaatac-aaaattagtggggcatgatgacatgcatctgtagcccca---------------gaagcaggagaatcacttgaaccaaggaggcggaggttgcaatgagtcaagatggtgccactgcacttcagcctggatgacagagcaagactattgtctc-------------------------aaaaa i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 30341 213 + 10068113 aagttccagaccagcctggcccacatagcgaaaccccatctctactaaagatac-aaaattagtggggcatgatggcatgcatctgtagccccagctactagggagattgaagccggagaatcgcttgaaccaaggaggcagaggttgcggtgagccgagatggtgccactgcactccagcctggatgacagagcaagactattgcctc-------------------------aaaag i saiBol1.JH378186 C 0 C 0 s aotNan1.NW_018505037v1 2590865 213 + 3417841 aagttccagaccagcctggcccacatagcgaaaccccatctctactaaaaatac-aaaattagtggggcatgatggcatgcatctgtagccccagctactagggagattgaagcaggagaatcgtttgaatcaaggaggcggaggttgcagtgagccaagatggtgccactgcacttcagcctggatgacagagcgagactattgtctc-------------------------aaaaa i aotNan1.NW_018505037v1 I 1649 C 0 e cebCap1.NW_016108322v1 88335 2098 + 99478 I a score=489189.000000 s hg38.chr5_KI270795v1_alt 128147 82 + 131892 aaaaaaaaaTTG--------------GTTGTAACATGTATGAATAGGAAttcatatccctaatccacaaagctctcagacgctaataaaagatgac s panTro5.chr5 3442785 81 - 181907262 aaaaaaaaaTTG--------------GTTGCAACATGTATGAATA-GAATTCGtatccctaatccacaaagctctcagacgctaataaaagatgac i panTro5.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 105302 82 + 152767 aaaaaaaaaaTA--------------GTTGCAACATGTATGAATAGGAAttcatatccctaatccacaaagctctcagacgctaataaaagatgac i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160367652 82 - 163208435 aaaaaaaaaaTA--------------GTTGCAACATGCATGAATAGGAAttcatatccctaatccacaaagctctcagacgctaataaaagatgac i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3634672 82 - 180051392 aaaaaaaaaaaa--------------GTTGCAACATGTATGAATAGGAATTCATATCCCTAATCCACAAAGCACTCAGACGCTAATAAAAGATGAC i rheMac8.chr6 I 1 C 0 s macFas5.chr6 3823745 82 - 181584905 aaaaaaaaaaaa--------------GTTGCAACATGTATGAATAGGAAttcatatccctaatccacaaagcactcagacgctaataaaagatgac i macFas5.chr6 I 1 C 0 s macNem1.NW_012020287v1 3843549 77 + 4899514 aaaaaaaaaaaa--------------GTTGCAACATGTATGAATAGGAATTCATATCCCTAATCCACAAAGCACTCAGACACT-----AAGATGAC i macNem1.NW_012020287v1 I 1 C 0 s cerAty1.NW_012001120v1 3567750 82 - 3647740 aaaaaaaaaaaa--------------GTTGCAACATGTATGAATAGGAATTCATATCCCTAATCCACAAAGCACTCAGACGCTAATAAAAGATGAC i cerAty1.NW_012001120v1 I 1 C 0 s chlSab2.chr23 79701984 82 + 82825804 aaaaaaaaaaaa--------------GTTGCAACATGTATGAATAGGAAttcatatccctaatccacaaagcactcagacgctaataaaagatgac i chlSab2.chr23 C 0 C 0 s colAng1.NW_012117422v1 148925 80 - 815015 --aaaaaagaaa--------------GTTGCAACACGTATGAATAGGAAttcatatccctaatccacaaagctctcagatgctaataaaagatgac i colAng1.NW_012117422v1 C 0 C 0 s calJac3.chr2 140361994 80 - 204313951 -aaaaaaaaaG---------------Gttacaacatgtatgaataggaattcatatccctaatcttcagagctctcaaatgctaataaaaaacgac i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 30554 95 + 10068113 -aaaaaaaaaaaaaaaaaaaaaGACTATTGCAACAGGTATGAATAGGAATTCGTATCCCTAATCTACAGAGCTCTTAAATGCTAATAAAAAATGAC i saiBol1.JH378186 C 0 I 913 s aotNan1.NW_018505037v1 2591078 81 + 3417841 -aaaaaaaaaaG--------------GTTGCAACACGTATGAATAGGAAttcatatccctaatctacagagctctcaaatgctaataaaaaatgat i aotNan1.NW_018505037v1 C 0 C 0 e cebCap1.NW_016108322v1 88335 2098 + 99478 I e manLeu1.NW_012103876v1 1669126 511 - 1768974 I a score=195754.000000 s hg38.chr5_KI270795v1_alt 128229 37 + 131892 tatatcaatatacaaa-tacaca----acacagaggcaatgc s panTro5.chr5 3442866 38 - 181907262 tatatcaatatacaaattacaca----acacagaggcaatgc i panTro5.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 105384 37 + 152767 tatatcagtatacaaa-tacaca----acacagaagcaatgc i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160367734 37 - 163208435 tatatcaatatacaaa-tacaca----acacagaggcagtgc i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3634754 37 - 180051392 TATATCAATATACAAA-TACACA----ACGCAGAGGCAATGC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3823827 37 - 181584905 tatatcaatatacaaa-tacaca----acgcagaggcaatgc i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3843626 37 + 4899514 TATATCAATATACAAA-TACACA----ACGCAGAGGCAATGC i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012001120v1 3567832 37 - 3647740 TATATCAATATACAAA-TACACA----ACGCAGAGGCAATGC i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79702066 37 + 82825804 tatatcaatatacgaa-tacaca----acgcagaggcaatgc i chlSab2.chr23 C 0 C 0 s colAng1.NW_012117422v1 149005 37 - 815015 tatatcaatatacaaa-tacaca----acgcagaggcaatgc i colAng1.NW_012117422v1 C 0 I 286 s calJac3.chr2 140362074 41 - 204313951 tatatcaatatacaaa-tacacaaatcactcagaagtaatac i calJac3.chr2 C 0 C 0 s aotNan1.NW_018505037v1 2591159 41 + 3417841 tatatcaatatacaaa-tacacaaataactcagaagcaatac i aotNan1.NW_018505037v1 C 0 C 0 e cebCap1.NW_016108322v1 88335 2098 + 99478 I e saiBol1.JH378186 30649 913 + 10068113 I e manLeu1.NW_012103876v1 1669126 511 - 1768974 I a score=10351.000000 s hg38.chr5_KI270795v1_alt 128266 2 + 131892 ag s panTro5.chr5 3442904 2 - 181907262 cg i panTro5.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 105421 2 + 152767 ag i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160367771 2 - 163208435 ag i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3634791 2 - 180051392 AG i rheMac8.chr6 C 0 I 297 s macFas5.chr6 3823864 2 - 181584905 ag i macFas5.chr6 C 0 I 297 s macNem1.NW_012020287v1 3843663 2 + 4899514 AG i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012001120v1 3567869 2 - 3647740 AG i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79702103 2 + 82825804 ag i chlSab2.chr23 C 0 I 297 s colAng1.NW_012117422v1 149328 2 - 815015 ag i colAng1.NW_012117422v1 I 286 C 0 s calJac3.chr2 140362115 2 - 204313951 ag i calJac3.chr2 C 0 C 0 s aotNan1.NW_018505037v1 2591200 2 + 3417841 ag i aotNan1.NW_018505037v1 C 0 C 0 e cebCap1.NW_016108322v1 88335 2098 + 99478 I e saiBol1.JH378186 30649 913 + 10068113 I e manLeu1.NW_012103876v1 1669126 511 - 1768974 I a score=31246.000000 s hg38.chr5_KI270795v1_alt 128268 6 + 131892 aaaaga- s panTro5.chr5 3442906 6 - 181907262 aaaaga- i panTro5.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 105423 6 + 152767 aaaaga- i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160367773 6 - 163208435 aaaaga- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3635090 6 - 180051392 aaaaga- i rheMac8.chr6 I 297 C 0 s macFas5.chr6 3824163 6 - 181584905 aaaaga- i macFas5.chr6 I 297 C 0 s macNem1.NW_012020287v1 3843665 6 + 4899514 AAAAGA- i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012001120v1 3567871 6 - 3647740 AAAAGA- i cerAty1.NW_012001120v1 C 0 I 295 s chlSab2.chr23 79702402 6 + 82825804 aaaaga- i chlSab2.chr23 I 297 C 0 s manLeu1.NW_012103876v1 1669637 6 - 1768974 aaaaga- i manLeu1.NW_012103876v1 I 511 C 0 s colAng1.NW_012117422v1 149330 6 - 815015 aaaaga- i colAng1.NW_012117422v1 C 0 C 0 s calJac3.chr2 140362117 7 - 204313951 gaaagaa i calJac3.chr2 C 0 C 0 s aotNan1.NW_018505037v1 2591202 7 + 3417841 gaaagaa i aotNan1.NW_018505037v1 C 0 C 0 e cebCap1.NW_016108322v1 88335 2098 + 99478 I e saiBol1.JH378186 30649 913 + 10068113 I a score=35490.000000 s hg38.chr5_KI270795v1_alt 128274 5 + 131892 aaaat s panTro5.chr5 3442912 5 - 181907262 aaaat i panTro5.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 105429 5 + 152767 aaaat i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160367779 5 - 163208435 aaaat i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3635096 5 - 180051392 aaaaT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3824169 5 - 181584905 aaaat i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3843671 5 + 4899514 AAAAT i macNem1.NW_012020287v1 C 0 I 321 s cerAty1.NW_012001120v1 3568172 5 - 3647740 aaaaT i cerAty1.NW_012001120v1 I 295 C 0 s chlSab2.chr23 79702408 5 + 82825804 aaaat i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1669643 5 - 1768974 aaaaT i manLeu1.NW_012103876v1 C 0 C 0 s colAng1.NW_012117422v1 149336 5 - 815015 aaaat i colAng1.NW_012117422v1 C 0 C 0 s calJac3.chr2 140362124 5 - 204313951 aaaat i calJac3.chr2 C 0 C 0 s aotNan1.NW_018505037v1 2591209 5 + 3417841 aaaat i aotNan1.NW_018505037v1 C 0 C 0 e cebCap1.NW_016108322v1 88335 2098 + 99478 I e saiBol1.JH378186 30649 913 + 10068113 I a score=82863.000000 s hg38.chr5_KI270795v1_alt 128279 14 + 131892 gtaaattgccaata s panTro5.chr5 3442917 14 - 181907262 gtaaattgccaata i panTro5.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 105434 14 + 152767 gtaaattgccaata i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160367784 14 - 163208435 gtcaattgccaata i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3635101 14 - 180051392 GTAAATTGCCAATA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3824174 14 - 181584905 gtaaattgccaata i macFas5.chr6 C 0 C 0 s cerAty1.NW_012001120v1 3568177 14 - 3647740 GCAAATTGCCAATA i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79702413 14 + 82825804 gtaaattgccaata i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1669648 14 - 1768974 GTAAATTGCCAATA i manLeu1.NW_012103876v1 C 0 C 0 s colAng1.NW_012117422v1 149341 14 - 815015 gtaaattgccaata i colAng1.NW_012117422v1 C 0 C 0 s calJac3.chr2 140362129 14 - 204313951 gtaaattgccaata i calJac3.chr2 C 0 C 0 s aotNan1.NW_018505037v1 2591214 14 + 3417841 gtaaattgccaata i aotNan1.NW_018505037v1 C 0 C 0 e cebCap1.NW_016108322v1 88335 2098 + 99478 I e saiBol1.JH378186 30649 913 + 10068113 I e macNem1.NW_012020287v1 3843676 321 + 4899514 I a score=176853.000000 s hg38.chr5_KI270795v1_alt 128293 30 + 131892 aacatgaaac--ttttaactctcact-agcaat s panTro5.chr5 3442931 30 - 181907262 aacatgaaac--tttt-actctcactaagcaat i panTro5.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 105448 32 + 152767 aacatgaaactgttttaactctcact-agcaat i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160367798 32 - 163208435 aacatgaaactgttttaactctcact-agcaat i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3635115 32 - 180051392 AACATGAAACTGTTTTAACTCTCACT-AGCAAT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3824188 32 - 181584905 aacatgaaactgttttaactctcact-agcaat i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3843997 31 + 4899514 AACATGAAACTG-TTTAACTCTCACT-AGCAAT i macNem1.NW_012020287v1 I 321 C 0 s cerAty1.NW_012001120v1 3568191 32 - 3647740 AACATGAAACTGTTTTAACTCTCACT-AGCAAT i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79702427 32 + 82825804 aacgtgaaactgttttaactctcact-agcaat i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1669662 32 - 1768974 AACATGAAACTGTTTTAACTCTCACT-AGCAAT i manLeu1.NW_012103876v1 C 0 C 0 s colAng1.NW_012117422v1 149355 32 - 815015 aacacgaaaccgttttaactctcact-agcaat i colAng1.NW_012117422v1 C 0 C 0 s calJac3.chr2 140362143 31 - 204313951 aacatg-aactgttttaactctctct-agaaat i calJac3.chr2 C 0 C 0 s aotNan1.NW_018505037v1 2591228 31 + 3417841 aacatg-aactgttttaactctctct-agaaat i aotNan1.NW_018505037v1 C 0 C 0 e cebCap1.NW_016108322v1 88335 2098 + 99478 I e saiBol1.JH378186 30649 913 + 10068113 I a score=822264.000000 s hg38.chr5_KI270795v1_alt 128323 123 + 131892 taatgaa-cattttaaaataagcaaaca--agaagac-atcactctcag-ttaacaaattgtcaaaa-atggtacaggttaacaaGGAGGTG-CTGAAA--CCAATACTCAGGTTCTTTT--GGTGGAATTCAA s panTro5.chr5 3442961 121 - 181907262 taatgaa-cattttaaagtaagcaaaca--agaagac-atcactctcag-ttaacaaattgtcaaaa-at-gtacaggttaacaaGGAGGTGCCTGAAA--CC-ATACTCAGGTTCTTTT--GGT-GAATTCAA i panTro5.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 105480 122 + 152767 taatgaa-cattttaaaataagcaaaca--agaagac-atcactctcag-ttaacaaattgtcaaaa-atGGTACAGGTTAACGAGGAGGTG-CTGAAA--CCAATGCTCAGGTTC-TTT--GGTGGAATTCAA i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160367830 123 - 163208435 taatgaa-cattttaaaataagcaaaca--agaagac-atcactctcag-ttaacaaattgtcaaaa-atGGTACAGGTTAACAAGGAGGTG-CTGAAA--CAAATACTCAGGTTCTTTT--GGTGGAATTCAA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3635147 124 - 180051392 TAATGAA-CATTTTAAAATAAGCAACTCTTAGAAGAC-ATCACTCTCAG-TTAACAAATTGTCAAAA-ATGGTACAGGTTAACAAGGAGGTA-CTGAAA--CCAATAC-CAGGTTCTTTT--GCTGGAATTCAA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3824220 124 - 181584905 taatgaa-cattttaaaataagcaactcttagaagac-atcactctcag-ttaacaaattgtcaaaa-atggtacaggttaacaaggaggta-ctgaaa--ccaatac-caggttctttt--gctggaattcaa i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3844028 132 + 4899514 TAATGAAGCATTTTAAAATAAGCATCCATTAGAAGACAATCACTCTCAGTTTGACAATTTGTCAAAACATGGTACAGGTTAACAAGGAGGTA-CTGAAAACCAAATAC-CAGGTTCTTTTGGGCTGGAATTCAA i macNem1.NW_012020287v1 C 0 I 1099 s cerAty1.NW_012001120v1 3568223 124 - 3647740 TAATGAA-CATTTTAAAATAAGCAACTCTTAGAAGAC-ATCACTCTCAG-TTAACAAATTGTCAAAA-ATGGTACAGGTTAACAAGGAGGTA-CTGAAA--CCAATAC-CAGGTTCTTTT--GCTGGAATTCAA i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79702459 124 + 82825804 taatgaa-cattttaaaataagcaactcttagaagac-atcactctcag-ttaacaaattgtcaaaa-atggtacaggttaacaaggaggta-ctgaaa--ccaatac-caggttctttt--gctggaattcaa i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1669694 124 - 1768974 TAATGAA-CATTTTAAAATAAGCGACTCTTAGGAGAC-ATCACTCTCAG-TCAACAAATTGTCAAAA-ATGGTACAGGTTAACAAGGAGGTA-CTGAAA--CCAATAC-CAGGTTCTTTT--GCTGGAATTCAA i manLeu1.NW_012103876v1 C 0 C 0 s colAng1.NW_012117422v1 149387 121 - 815015 taatgaa-cattttaaaataagcaaca---agaagac-atcactctcag-ttaacaaattgtcagaa-atggtacaggttaacaaggaggta-ctgaaa--ccaatac-caggttctttt--gctggaattcaa i colAng1.NW_012117422v1 C 0 C 0 s calJac3.chr2 140362174 122 - 204313951 taacgaa-catttaaaaataaacaaca---agaagac-atcactctcag-ttaacaaattgtcaaaa-atggtacaggttaacaaggacatg-ctgaaa--tgaatactcaggttctttt--ggtggaattcaa i calJac3.chr2 C 0 C 0 s cebCap1.NW_016108322v1 90433 122 + 99478 TAATGAA-CATTTTAAAATAAACAACA---AGAAGAC-ATCACTCTCAG-TTAACAAATTGTCAAAA-ATGGTACAGGTTAACAAGGACATG-CTGAAA--CCAATACTCAAGTTCTTTT--GGTAGAATTCAA i cebCap1.NW_016108322v1 I 2098 C 0 s aotNan1.NW_018505037v1 2591259 118 + 3417841 taatgaa-cattttaaaat----aaca---agaagac-atcactctcag-ttaacaaattgtcaaaa-atggtacaggttaacaaGGACATG-CTGAAA--CCAATACTCAGGTTCTTTT--GGTGGAATTCAA i aotNan1.NW_018505037v1 C 0 C 0 e saiBol1.JH378186 30649 913 + 10068113 I a score=5909.000000 s hg38.chr5_KI270795v1_alt 128446 2 + 131892 AC s panTro5.chr5 3443082 1 - 181907262 A- i panTro5.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 105602 2 + 152767 AC i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160367953 2 - 163208435 AC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3635271 2 - 180051392 AT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3824344 2 - 181584905 at i macFas5.chr6 C 0 C 0 s cerAty1.NW_012001120v1 3568347 2 - 3647740 AC i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79702583 2 + 82825804 ac i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1669818 2 - 1768974 AC i manLeu1.NW_012103876v1 C 0 C 0 s colAng1.NW_012117422v1 149508 2 - 815015 ac i colAng1.NW_012117422v1 C 0 C 0 s calJac3.chr2 140362296 2 - 204313951 ac i calJac3.chr2 C 0 C 0 s cebCap1.NW_016108322v1 90555 2 + 99478 AC i cebCap1.NW_016108322v1 C 0 C 0 s aotNan1.NW_018505037v1 2591377 2 + 3417841 AC i aotNan1.NW_018505037v1 C 0 C 0 e saiBol1.JH378186 30649 913 + 10068113 I e macNem1.NW_012020287v1 3844160 1099 + 4899514 I a score=429559.000000 s hg38.chr5_KI270795v1_alt 128448 63 + 131892 CAGTGTAATTTTTCTAGAAGGCAGT-CTGGCT-CA-AGGAGATAATTAGG-TAGGAGTGCAATTGTG s panTro5.chr5 3443083 63 - 181907262 CAGTGTAA-TTTTCTAGAAGGCAGTCCTGGCTGCAGAGGAGATAATTAAG-TA-GAGTGC-ATTCTG i panTro5.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 105604 63 + 152767 CAGTGTCATTTTTCTAGGAGGTAGT-CTGGCT-CA-AGGAGATAATTATG-TAGGAGTGCAAGTGTG i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160367955 63 - 163208435 CAGTGTAATTTTTCTAGAAGGCAGT-CTGGCT-CA-AGGAGATAATTAGG-TAGGAGTGCAAGTGTG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3635273 63 - 180051392 CAGTGTAATTTTTCTAGAAGGCAGT-CTGGCC-CA-AGGACATAATTAGG-TAGGAGTGCAAGTGTG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3824346 63 - 181584905 cagtgtaatttttctagaaggcagt-ctggcC-CA-AGGACATAATTAGG-TAGGAGTGCAAGTGTG i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3845259 64 + 4899514 CAGTGTAATTTTTCTAGAAGGCATT-CTGGCC-CA-AGGACATAATTAGGTTAGGAGTGCAAGTGTG i macNem1.NW_012020287v1 I 1099 C 0 s cerAty1.NW_012001120v1 3568349 63 - 3647740 CAGTGTAATTTTTCTAGAAGGCAGT-CTGGCC-CA-AGGACATAATTAGG-TAGGAGTGCAAGTGTG i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79702585 63 + 82825804 cagtgtaatttttctagaaggtagt-ctggcC-CA-AGGACATAATTAGG-TAGGAGTGCAAGTGTG i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1669820 63 - 1768974 CAGTGTAATTTTTCTAGAAGGCAGT-CTGGCC-CA-AGGACATAATTAGG-TAGGAGTGCAAGTGTG i manLeu1.NW_012103876v1 C 0 M 2082 s colAng1.NW_012117422v1 149510 63 - 815015 cagtgtaatttttctggaaggcagt-ctggcC-CA-AGGACATAATTAGG-TAGGAGTGCAAGTGTG i colAng1.NW_012117422v1 C 0 C 0 s calJac3.chr2 140362298 57 - 204313951 tagtgtaatctt------gggcagt-ctggcC-CA-AGGACATAATTAGG-TATGAGTGCAAATGTG i calJac3.chr2 C 0 C 0 s cebCap1.NW_016108322v1 90557 63 + 99478 CAGTGTAATCTTTCTAGAAGGCAGT-CTGGCC-CA-AGGAGATAATTAGG-TATGAGTGCAAATGTG i cebCap1.NW_016108322v1 C 0 C 0 s aotNan1.NW_018505037v1 2591379 63 + 3417841 CAGTGTAATCTTTCTAGAAGGCAGT-CTGGCC-CA-AGGAGATAATTAGG-TATGAGTGCAAATGTG i aotNan1.NW_018505037v1 C 0 C 0 e saiBol1.JH378186 30649 913 + 10068113 I a score=1930350.000000 s hg38.chr5_KI270795v1_alt 128511 375 + 131892 TAATACAGGGGTTGTGATTCCAGACTTTTTAATAATAT-ATA-TAAAAAACTACTCACAACTTGA-GTATCC--ATCACTAAAGGCCCGTTTAAAGATTATTCTATGgg---acggg-tgtggtggctcatgcctgtaatccc-atcactttgggaggccgaggcaggtggatca-cctgagatcaggagtttgagaccagcctggacaacatggtgaaaccccagctctcctaaaaa-tacaaa-aattaggtgaggctgggtgtggtggctcacacctgtaatccc-agcactttgggaggccgaggcaggcgg-atcacctgaggtcagg-ag-------------------------------ttcgagactggcctgatcaatatg-gtgaaagcccatctctactgaaaatacaaa------a s panTro5.chr5 3443146 362 - 181907262 -AATACA-GGGTTGTGATTCCAGACTTTTT-ATAATATAATACTAAAAAACTACTCACAACTTGAGGTATCGCAATCACT-AAGGCCTGTTT-AAGA-TATCTTAT--G---Acgggctgtg--ggctcatgccctgaat-cc-atcacttt-ggaggccgaggcaggtggatcaccctgagatca-gagtttgaagccagcc-ggacaa-atggtgaaacccc-gct-tcctaaaaattacaaGCAATT--GTGAGTccgggtgc-ttgggtcacgcctgtaatcccaagcacttt-ggagg-cgaggcaggcggaatcacctgaggtcaggaag-------------------------------ttcgag-ctggcctgatcaatatg-ggtgaagcccattcatactg-aaata-aaa------a i panTro5.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 105667 376 + 152767 TAATACAGCGGTTGTGATTCCAGACTTTTTAATAATAT-ATATAAAAAAACTACTCACAACTCGA-GTATCC--ATCACTAAAGGCCTGTTTAAAGATTGTTCTATGgg---acggg-tgtggtggctcatgcctgtaatccc-atcactttgggaggccgaggcaggtggatca-cctgagatcaggagttcgagaccagcctggacaacatggtgaaaccccagctctcctaaaaa-tacaaa-aattaggtgaggccgggtgcggtgggtcacgcctgtaatccc-agcactttgggaggctgaggcaggcgg-atcacctgaggtcagg-ag-------------------------------ttcgagactggcctgatcaatatg-gtgaaaccccatctctactgaaaatacaaa------a i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160368018 362 - 163208435 TAATACAGGGGTTGTGACTCCAGACTTTTTAATAGTAT-ATA-GAAAAAACTACTCACAACTTGA-GTATCC--ATCACTAAAGGCTTGTTTAAACATTATTCGATGgg---acagg-tgtggtggcttatgcctgtaatccc-atcactttgggaggccgaggcaggtggatca-cctgagatcaggagttcgagaccagcctggacaacatggtgaaaccccagctctcctaaaaa-tacaaa-aattaggtgaggccgggtgcggtgggtcacgcctgtaatccc-agcactttgggaggccgaggcagacgg-atcacctgaggtcagg-ag-------------------------------ttcgagactggcctgatcaat--------------atctctactgaaaatacaaa------a i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3635336 376 - 180051392 TAATACAGGGGTTGTGACTCCAGACTTTTTAATAATAT-ATATTAAAAGACTACACACGACTTGA-GTATCC--ATCACTAAAGGCTTGTTTAAAGATTATTCTATGGG---ATggg-tgtggtagctcatgcctttaatccc-atcactttggaaggtcgaggcagatggatca-cctgaggtcaggagttcgagaccagcctggccaacgtggtgaaaccccagctctcctaaaaa-tacaaa-aattagatgaggccgggtgcagtgggtcacgcctgtaatccc-agcactttgggaggccgaggcaggcgg-atcacctgaggtcagg-ag-------------------------------ttcaagactggcctgatgaatatg-gtgaaaccccatctctactgaaaatagaaa------a i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3824409 376 - 181584905 TAATACAGGGGTTGTGACTCCAGACTTTTTAATAATAT-ATATTAAAAGACTACACACGACTTGA-GTATCC--ATCACTAAAGGCTTGTTTAAAGATTATTCTATGGG---ATggg-tgtggtagctcatgcctttaatccc-atcactttggaaggtcgaggcagatggatca-cctgaggtcaggagttcgagaccagcctggccaacgtggtgaaaccccagctctcctaaaaa-tacaaa-aattagatgaggccgggtgcagtgggtcacgcctgtaatccc-agcactttgggaggccgaggcaggcgg-atcacctgaggtcagg-ag-------------------------------ttcaagactggcctgatgaatatg-gtgaaaccccatctctactgaaaatagaaa------a i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3845323 369 + 4899514 TAATACAGGGG--GTGACTCCAGACTTTTTAAT-ATAT-ATATTAAAAGACTACACACGACTTGA-GTATCC--ATCACTAAAGGCTTGTTTAAAGATTATTCTATGGGAGCATggg-tgtggtagctcatgcctttaatcccaatcactttggaaggtcgaggcagatggatca-cctgaggtcaggagttcgagaccagcctggccaacgtggtgaaaccccagctctcctaaa----ataca-aattagatgaggcggggtgcagt-ggtcacgcctgtaatccc-g--cctttgggagggcgag--cggcgg-atcacctgaggtcagg-ag-------------------------------ttcaagactgccctgatgaatatg-gtgaaaccccatctctactgaaaatagaaa------a i macNem1.NW_012020287v1 C 0 T 1089 s cerAty1.NW_012001120v1 3568412 376 - 3647740 TAATACAGGGGTTGTGACTCCAGACTTTTTAATAATAT-ATATTAAAAGACTACACACGACTTGA-GTATCC--ATCACTAAAGGCTTGTTTAAAGATTATTCTATGGG---ATggg-tgtggtagctcatgcctttaatccc-atcactttggaaggtcgaggcagatggatca-cctgaggtcaggagttcgagaccagcctggccaacgtggtgaaaccccagctctcctaaaaa-tacaaa-aattagatgaggccgggtgcagtgggtcacgcctgtaatccc-agcactttgggaggccgaggcaggcgg-atcacctgaggtcagg-ag-------------------------------ttcaagactggcctgatgaatatg-gtgaaaccccatctctactgaaaatagaaa------a i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79702648 376 + 82825804 TAATACAGGGGTTGTGACTCCAGACTTTTTAATAATAT-ATATTAAAAGACTACACACGACTTGA-GTATCT--ATCACTAAAGGCTTGTTTAAAGATTATTCTATGGA---ATgag-tgtggtagctcatgcctttaatccc-atcactttggaaggtcgaggcagatggatca-catgaggtcaggagttcgagaccagcctggccaacgtggtgaaaccctagctctcctaaaaa-tacaaa-aattagatgaggccaggtgcagtgggtcatgcctgtaatccc-agcactttgggaggccgaggcaggcgg-atcacctgaggtcagg-ag-------------------------------ttcaagactggcctgttgaatatg-gtgaaaccccatctctactgaaaatagaaa------a i chlSab2.chr23 C 0 C 0 s colAng1.NW_012117422v1 149573 376 - 815015 TAATACAGGGGTTGTGACTCCAGACTTTTAAATAATAT-ATATTAAGAAACTACACACAACTTGA-GTATCC--ATCAGTAAAGGCTTGTTTAAAGATTCTTCTATGGG---ATggg-tgtggtggctcatgcctttaatccc-atcactttggaaggctgaggcagatggatca-cctgaggtcaggagttcgagaccagcctagccaacatggtgaaaccccagctctcctaaaaa-tacaaa-aattcgatgaggctgggtgcggtgggtcacacctgtaatccc-agcactttgggaggccaaggcaggtgg-atctcctgaggtcagg-ag-------------------------------ttcaagactggcctgatgaatatg-gtgaaaccccatctctactgaaaatagaaa------a i colAng1.NW_012117422v1 C 0 C 0 s calJac3.chr2 140362355 404 - 204313951 TAATACAGATGTTGTGACTCCGGACTTTTAACTAACAT-ATATTTAAAAACTATACACAACTTGA-GTATCC--ATCACTAAAGGCTTGTTTAAAAA---TTCTATTgg---ctggg-cacagtggctcatgcctgtaatccc-agcactttgggaggccgaggcaggtggat---cccaaggtcaagagatcgagaccatcctagtcaacatggtgaaaccccgtctctactaaaaa-tacaaa-aaat-----tagctgggcatggtggcgcatgcctgtaatccc-agctactcaggaggctgagacaggaga-attgcctgaacccagg-aggcggaggttgcggtgagccaagatcgcgccattgcactccagcctgggtaacaagagcgaaactccgtctcaaaaaaaaaaaaaaaTTCTTCT i calJac3.chr2 C 0 C 0 s cebCap1.NW_016108322v1 90620 376 + 99478 TAATACAGGGGTTGTGACTCCAGACTTTTTAATAATAT-ATATTTAAAAACTACAAACAACTTGA-GTATCC--ATCAATAAAGGCTTGTTTAAAGATTCTTCTATTgg---ccagg-cgtggtggctcacacctgtactctc-atcgctttgggaggccaaggcaggtggatca-cctgaggtcaggagtttgagaccagcttggccaacatggttaaaccccgtctctactaaaaa-tataaa-aattaggtgaagctgggctcagtggctcacgcctataatccc-agaactttcggaggcctaggtgtgcgg-atcacctggggtcact-ag-------------------------------tttcagatcagcctgaccaatatg-gtgaaactccatatctactaaaaatacaaa------a i cebCap1.NW_016108322v1 C 0 C 0 s aotNan1.NW_018505037v1 2591442 376 + 3417841 TAATACAGGAGTTGTGACTCCAGACTTTTTAATAATAT-ATGTTTAAAAACTACACACAACTTGA-GTATCC--ATCACTAAAGGCTTGTTTAAAGATTCTTCTATTgg---ccagg-cgtggtggctcccacctgtactctc-atcgctttgggaggccgaggcaggtggatca-cctgaggtcaggagtttgagaccagcttggccaacacagtcaaaccccgtctctactaaaaa-tagaaa-aattaggtgaagctgggctcagtgactcacgcctgtaatccc-agaactttcggaggcctgggtgggcgg-atcacctggggtcact-gg-------------------------------tttcagaccagcctgaccaatatg-gtgaaactccatatctactaaaaatacgaa------a i aotNan1.NW_018505037v1 C 0 C 0 e saiBol1.JH378186 30649 913 + 10068113 I e manLeu1.NW_012103876v1 1669883 2082 - 1768974 M a score=357409.000000 s hg38.chr5_KI270795v1_alt 128886 75 + 131892 attagccggctttggtggcgggcgcctg-t-agtcccagctactcgggaggctgagacaggagaatcactttgaacc s panTro5.chr5 3443508 70 - 181907262 attagccggc-ctggt-gtgggtgcctg-t-agtcccagcctc-cgggaggctg-ga-aggagaatcactttgaacc i panTro5.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 106043 75 + 152767 attagctggccttggtggtgggtgcctg-t-agtcccagctactcgggagactgagacaggagaatcactttgaacc i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160368380 75 - 163208435 attagccggccttggtggtgggtgcctg-t-agtcctagctactcgggaggctgagacaggagaatcactttgaacc i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3635712 75 - 180051392 attagcaggccttggtggtgggtgcctg-t-agtctcagctacttgggaggctgagagaggagaatcactttgaacc i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3824785 75 - 181584905 attagcaggccttggtggtgggtgcctg-t-agtctcagctacttgggaggctgagagaggagaatcactttgaacc i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3844603 75 + 4899514 attagcaggcc-tggtggtggctgcctgat-agtctcagctacttgggaggctgagagaggagaatcactttgaacc i macNem1.NW_012020287v1 T 1089 I 1640 s cerAty1.NW_012001120v1 3568788 75 - 3647740 attagcaggccttggtggtgggtgcctg-t-agtctcagctacttgggaggctgagagaggagaatcactttgaacc i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79703024 75 + 82825804 attagcaggccttggtggtgggtgcctg-t-agtctcagttacttgggaggctgagagaggagaatcactttgaacc i chlSab2.chr23 C 0 C 0 s colAng1.NW_012117422v1 149949 76 - 815015 attagcaggccttggtggcgggtgcctg-taagtctcagctacttgggaggctgagagaggagaatcactttgaacc i colAng1.NW_012117422v1 C 0 C 0 s calJac3.chr2 140362759 74 - 204313951 ATTggccaggtgtggtggctcacacctg-t-actctcatcgctttgggaggctgaggcaggtggatcacctgaggc- i calJac3.chr2 C 0 C 0 s cebCap1.NW_016108322v1 90996 74 + 99478 attaaccaggtatggtggcaggctctca-t-agtcccagctacttatgaggctgagacaggagaaccacctgaacc- i cebCap1.NW_016108322v1 C 0 C 0 s aotNan1.NW_018505037v1 2591818 74 + 3417841 attaactggccatggtggcaggctcccg-t-agtcccagctacttatgaggctgagacaggagaaccgctttaacc- i aotNan1.NW_018505037v1 C 0 C 0 e saiBol1.JH378186 30649 913 + 10068113 I e manLeu1.NW_012103876v1 1669883 2082 - 1768974 M a score=347892.000000 s hg38.chr5_KI270795v1_alt 128961 129 + 131892 cgggaggcagaggttgctgtgagcc-gagatcacaccactgcactc-cagc-ctgg-gcg-aaagag-ggag-actccatctc--aaaaaaaaaaa-aaaaaat-----tatgtg-ggcgtggtggtacatgcctg-taa--tcccag s panTro5.chr5 3443578 127 - 181907262 --gga--caga-gttgctgtgagcc-gagatcaca-cactgcactctcagg-cccg-gcgcgaacag-aggg-acgccatcta--tcaaaaaaaaa-aaaaaaTG----TATGTGAggcgtggtggt-catgcgtgttaa--tcccag i panTro5.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 106118 132 + 152767 cgggaggcagaggttgctgtgagcc-aagatcacaccactgcactc-cagc-ctgg-gcg-acagag-ggag-actccatctc--aaaaaaaaaaa-aaaaaaaaat--tatgtg-ggcgtggtggtacatgcctg-taa--tcccag i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160368455 106 - 163208435 caggaggcagaggttgctgtgagcc-aagatcacgccactgcactc-cagc-ctgg-gtg-acaggg---------------------------aa-aaaaaat-----tatgtg-ggcatggtggtacatgcctg-taa--tcccag i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3635787 121 - 180051392 ctggaggcggaggttgctgtgagct-gagatcaca----------c-cagc-ctgg-gtg-acagag-ggag-attccgtctc--aaaaaaaaaaa-aaaaaat-----tatgtg-ggcatggtggtgcatgccta-taatctcccag i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3824860 121 - 181584905 ctggaggcggaggttgctgtgagct-gagatcaca----------c-cagc-ctgg-gtg-acagag-ggag-attccgtctc--aaaaaaaaaaa-aaaaaat-----tatgtg-ggcatggtggtgcatgccta-taatctcccag i macFas5.chr6 C 0 C 0 s cerAty1.NW_012001120v1 3568863 124 - 3647740 ctgaaggcggaggttgctgtgagcgagcaatcaca----------c-cagcgctggtgtg-acagagcggagcattccgtctc----aaataaaaa-aaaaaat-----tatgtg-ggcatggtggtgcatgccta-taatctcccag i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79703099 114 + 82825804 cgggaggcggaggttgctgtgagct-gagaccaca----------c-cagc-ctgg-gtg-acagag-ggag-attccgtctc---------aaaa-aaaaaat-----tatgtg-ggcatggtggtgcatgccta-taatctcccag i chlSab2.chr23 C 0 C 0 s colAng1.NW_012117422v1 150025 123 - 815015 tgggaggcggaggttgctgtgagct-gagatcaca----------c-cagc-ctgg-gtg-acagag-ggag-attccgtctcaaaaaaaaaaaaa-aaaaaat-----tatgtg-ggcgtggtggtgcatgcctg-taatctcccag i colAng1.NW_012117422v1 C 0 C 0 s calJac3.chr2 140362833 104 - 204313951 caggagtttgaga--------------------------------c-cagc-ttgg-cca-acacgg-tcaa-accccatctc--tgctaaaaatacaaaagttaggtgaagctg-ggctcagtggctcaggcccg-taa--tcccag i calJac3.chr2 C 0 I 376 s cebCap1.NW_016108322v1 91070 130 + 99478 caggagacagaggttgcagtgagcc-aagattgcgccactgcactc-tagc-ctgg-gcg-aaagag-ccag-acttcatctc--aaaaacaaaaataaaaaat-----aaggtg-ggcgtgctggtgcacaccta-taa--tcccag i cebCap1.NW_016108322v1 C 0 C 0 s aotNan1.NW_018505037v1 2591892 127 + 3417841 caggagacagatgctgcagtgagcc-aagattgcgccactgcactc-tagc-ctgg-gtg-acagag-ccaa-acttcatctc--aaaaaaaaa---aaaaaat-----taggtg-ggcatggtggtgcacaccta-taa--tcccag i aotNan1.NW_018505037v1 C 0 C 0 e saiBol1.JH378186 30649 913 + 10068113 I e macNem1.NW_012020287v1 3844678 1640 + 4899514 I e manLeu1.NW_012103876v1 1669883 2082 - 1768974 M a score=301956.000000 s hg38.chr5_KI270795v1_alt 129090 79 + 131892 ctact-cagttggctgaggttggagaatcgcttgaacccaggaagtggaggttgcagtgagctgagatcacgcc-at-tgca s panTro5.chr5 3443705 77 - 181907262 ctactgcagttgcctgaggttggagaatcgcttg-acccagg-agtgga-gttgcagt-agct-agatcacgccgatctgca i panTro5.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 106250 79 + 152767 ctact-cagttggctgaggttggagaatcgcttgaacccaggaagtggaggttgcagtgagctgagatcacgcc-at-tgca i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160368561 79 - 163208435 ctact-cagttggctgaggtaggagaatcgcttgaacccagaaagtggaggttgcagtgagctgagatcactcc-at-tgca i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3635908 79 - 180051392 gtact-cggttggctaaggcaggagaattgcttgaacctgggaagtggaggctgcaatgagccgagatcacacc-at-tgcg i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3824981 79 - 181584905 gtact-cggttggctaaggcaggagaattgcttgaacctgggaagtggaggctgcaatgagccgagatcacacc-at-tgcg i macFas5.chr6 C 0 C 0 s cerAty1.NW_012001120v1 3568987 79 - 3647740 gcact-cggttggctgaggcaggagaattgcttgaacctgggaagtggaggctgcaatgagccgagatcacacc-at-tgca i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79703213 79 + 82825804 gtact-cggttggctgaggcaggagaattgcttgaacttgggaagtggaggctgcaatgagccaagatcacacc-at-tgca i chlSab2.chr23 C 0 C 0 s colAng1.NW_012117422v1 150148 79 - 815015 gtact-cggctggctgaggcaggagaattgcttgaacctgggaagtggaggttgcaatgagccgagatcacacc-at-tgca i colAng1.NW_012117422v1 C 0 C 0 s cebCap1.NW_016108322v1 91200 79 + 99478 ctact-cagttggctgaggcaggagagtcgcttgaactcaggaggtggaggttgcattgagccaagatcacgcc-at-tgca i cebCap1.NW_016108322v1 C 0 I 9 s aotNan1.NW_018505037v1 2592019 79 + 3417841 cacct-cagttggctgaggcaggagagttgcttgaactcaggaggtggaggttacattgagctgagatcacgcc-at-tgca i aotNan1.NW_018505037v1 C 0 I 9 e saiBol1.JH378186 30649 913 + 10068113 I e calJac3.chr2 140362937 376 - 204313951 I e macNem1.NW_012020287v1 3844678 1640 + 4899514 I e manLeu1.NW_012103876v1 1669883 2082 - 1768974 M a score=107304.000000 s hg38.chr5_KI270795v1_alt 129169 38 + 131892 ctccagcctgggtgacaagagtgagactcagtcccaag s panTro5.chr5 3443782 35 - 181907262 c-cca--ctgggtgacaagagtgagactcagtctcaag i panTro5.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 106329 38 + 152767 ctccagcctgggcgacaagagtgagactcagtcccaag i gorGor5.CYUI01000356v1 C 0 I 2 s nomLeu3.chr2 160368640 38 - 163208435 ctccagcctgggcgacaagagtgagactcagtatcaag i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3635987 38 - 180051392 ctccagcctgggtgacaagagcaagactaagtctcaag i rheMac8.chr6 C 0 I 303 s macFas5.chr6 3825060 38 - 181584905 ctccagcctgggtgacaagagcaagactaagtctcaag i macFas5.chr6 C 0 I 302 s cerAty1.NW_012001120v1 3569066 38 - 3647740 ctccagcctgggtgacaagagcaagactaagtctcaag i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79703292 38 + 82825804 ctccagcctgggtgacaagagcaagactaagtctcaag i chlSab2.chr23 C 0 C 0 s colAng1.NW_012117422v1 150227 38 - 815015 ctccagcctgggtgacaagagcaagactaagtctcaag i colAng1.NW_012117422v1 C 0 C 0 e cebCap1.NW_016108322v1 91279 9 + 99478 I e saiBol1.JH378186 30649 913 + 10068113 I e calJac3.chr2 140362937 376 - 204313951 I e macNem1.NW_012020287v1 3844678 1640 + 4899514 I e aotNan1.NW_018505037v1 2592098 9 + 3417841 I e manLeu1.NW_012103876v1 1669883 2082 - 1768974 M a score=209484.000000 s hg38.chr5_KI270795v1_alt 129207 58 + 131892 aaaaaaaaaaaaaaaTTCTTCTGTGAA-GTGCTGTGAGCACGAGAATGCCGGCTGACAG s panTro5.chr5 3443817 55 - 181907262 ---aaaaaaaaaaaaTTCTTCTGTGAATGTGCTGTGAGCACGAGAATGCC-TCTGACAG i panTro5.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 106369 58 + 152767 aaaaaaaaaaaaaaaTTCTTCTGTGAA-GTGCTGTGAGCACGAGAATGCCGGCTGACAG i gorGor5.CYUI01000356v1 I 2 C 0 s nomLeu3.chr2 160368678 57 - 163208435 -gagaaaaaaaaaaaTTCTTCTGTGCA-GTGCTGTAAGCACGAGAATGCCAGCTGACAG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3636328 58 - 180051392 aaaaaaaaaaaaaaaTTATTCTGTGAA-GTGCTGTGAGCACAAGAATGCCAGCTGACAG i rheMac8.chr6 I 303 C 0 s macFas5.chr6 3825400 58 - 181584905 aaaaaaaaaaaaaaaTTATTCTGTGAA-GTGCTGTGAGCACAAGAATGCCAGCTGACAG i macFas5.chr6 I 302 C 0 s macNem1.NW_012020287v1 3846318 58 + 4899514 aaaaaaaaaaaaaaTTCATTCTGTGAA-GTGCTGTGAGCACAAGAATGCCAGCTGACAG i macNem1.NW_012020287v1 I 1640 I 439 s cerAty1.NW_012001120v1 3569104 58 - 3647740 taaaaaaaaaaaaaaTTCTTCTGTGAA-GTGCTGTGAGCACAAGAATGCCAGCTGACAG i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79703330 58 + 82825804 aaaaaaaaaaaaaaaTTCTTCTGTGAA-GTGCTGTGAGCACAAGAATGCCAGCTGACAG i chlSab2.chr23 C 0 C 0 s colAng1.NW_012117422v1 150265 55 - 815015 ---aaaaaaaaaaaaTTCTTCTGTGAA-GTGCTGTGAGCACAAGAATGCCAGCTGACAG i colAng1.NW_012117422v1 C 0 C 0 e cebCap1.NW_016108322v1 91279 9 + 99478 I e saiBol1.JH378186 30649 913 + 10068113 I e calJac3.chr2 140362937 376 - 204313951 I e aotNan1.NW_018505037v1 2592098 9 + 3417841 I e manLeu1.NW_012103876v1 1669883 2082 - 1768974 M a score=133022.000000 s hg38.chr5_KI270795v1_alt 129265 51 + 131892 CCACCACTG-CTGCCATCAC-CATCCAC-CTCCCTCCAGGGGCTTCATTCTT-CA s panTro5.chr5 3443872 53 - 181907262 CCCACACTGCCTGCC-TCACGCATCAACTCCCCCTCCA-GGGCTTCATTCTTCCA i panTro5.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 106427 51 + 152767 CCACCACTG-CTGCCATGAC-CATCCAC-CTCCCTCCAGGGGCTTCATTCTT-CA i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160368735 51 - 163208435 ccaccacca-ctgccatcac-cacccac-ctccCTCCATGGGCTTCATTCTT-CA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3636386 51 - 180051392 CCGCCACTG-CTGCCATCAC-CACCCAC-CTCTCTCCACAGGCTTCATTCTT-CA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3825458 51 - 181584905 CCGCCACTG-CTGCCATCAC-CACCCAC-CTCTCTCCACAGGCTTCATTCTT-CA i macFas5.chr6 C 0 C 0 s cerAty1.NW_012001120v1 3569162 51 - 3647740 CCGCCACTG-CTGCCATCAC-CACCCAC-CTCCCTCCACAGGCTTCATTCTT-CA i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79703388 51 + 82825804 CCGCCACTG-CTGCCATCAC-CACCCAC-CTCCCTCCACAGGCTTCATTCTT-CA i chlSab2.chr23 C 0 C 0 s colAng1.NW_012117422v1 150320 51 - 815015 CCGCCACTG-CTGCCATCAC-CACCCAC-CTCCCTCCACAGGCTTCATTCTT-CA i colAng1.NW_012117422v1 C 0 C 0 e cebCap1.NW_016108322v1 91279 9 + 99478 I e saiBol1.JH378186 30649 913 + 10068113 I e calJac3.chr2 140362937 376 - 204313951 I e macNem1.NW_012020287v1 3846376 439 + 4899514 I e aotNan1.NW_018505037v1 2592098 9 + 3417841 I e manLeu1.NW_012103876v1 1669883 2082 - 1768974 M a score=31652.000000 s hg38.chr5_KI270795v1_alt 129316 8 + 131892 CTTCATCG s panTro5.chr5 3443925 8 - 181907262 CTCCTTCG i panTro5.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 106478 8 + 152767 CTCCTTCG i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160368786 8 - 163208435 CTCCTTCC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3636437 8 - 180051392 CTCCTTCC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3825509 8 - 181584905 CTCCTTCC i macFas5.chr6 C 0 C 0 s cerAty1.NW_012001120v1 3569213 8 - 3647740 CTCCTTCC i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79703439 8 + 82825804 CTCCTTCC i chlSab2.chr23 C 0 C 0 s colAng1.NW_012117422v1 150371 8 - 815015 CTCCTTCC i colAng1.NW_012117422v1 C 0 C 0 s calJac3.chr2 140363313 8 - 204313951 ctccTTCA i calJac3.chr2 I 376 C 0 s saiBol1.JH378186 31562 8 + 10068113 ctccTTCA i saiBol1.JH378186 I 913 C 0 e cebCap1.NW_016108322v1 91279 9 + 99478 I e macNem1.NW_012020287v1 3846376 439 + 4899514 I e aotNan1.NW_018505037v1 2592098 9 + 3417841 I e manLeu1.NW_012103876v1 1669883 2082 - 1768974 M a score=826624.000000 s hg38.chr5_KI270795v1_alt 129324 141 + 131892 AGCTGCCTC-CCCGTCCCTTGT-CCCTACC-CCTTGCCCTGCTTCTGCAGGA-GGT--AACCCTGCTGAGGGTCGGGGAGCAGGGCTGCAGGCACAGGGAAAC-TTCCTTCCCACTAAATGGGTAGCAGGGATGGGA-CAGGGAAGAGG s panTro5.chr5 3443933 140 - 181907262 AGCTGCCTCGCCCATCCTTTTTCCCCTACCACCTTTCCCTGCTTCT-CAGGACCGTTGAACCCTGC---GAGTCGGGGAGCAGCTCAGCA-GCAAGGGAAAACTTTCCTTCCCA-TAAATGGT--GCA-GGATGGGAGCAGGGAAGAGG i panTro5.chr5 C 0 I 40 s gorGor5.CYUI01000356v1 106486 142 + 152767 AGCTGCCTC-CCCATCCCTTGTCCCCTACG-CCTTGCCCTGCTTCTGCAGGA-GGT--AACCCTGCTGAGGGTCGGGGAGCAGGGCTGCAGGCACAGGGAAAC-TTCCTTCCCACTAAATGGGTAGCAGGGATGGGA-CAGAGAAGAGG i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160368794 142 - 163208435 AGCTGCCTC-CCCATCCCTTGTCCCCTACC-CCTTGCCCTGCTTCTGCAGGA-GGT--AACCCTGCTGAGGGTCAGGGAGCAGGGCTGCGGGCACAGGGAAAC-TTCCTTCCCACTAAATGGGTAGCAGGGATGGGA-CAGGGAAGAGG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3636445 141 - 180051392 AGCTGCCTC-CCCATCCCTTGTCCCC-AAC-CTCTGCCCTGCTTCTGCAGAA-GGT--AACACTGCTGAGGGTTGGGGAGCAGGGCTGCAGGCACAGGGAAAC-TTCCTTCCCACTAAATGGGTAGCAAGGATGGGA-CAGGGAAGAGG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3825517 141 - 181584905 AGCTGCCTC-CCCATCCCTTGTCCCC-AAC-CTCTGCCCTGCTTCTGCAGAA-GGT--AACACTGCTGAGGGTTGGGGAGCAGGGCTGCAGGCACAGGGAAAC-TTCCTTCCCACTAAATGGGTAGCAAGGATGGGA-CAGGGAAGAGG i macFas5.chr6 C 0 C 0 s cerAty1.NW_012001120v1 3569221 141 - 3647740 AGCTGCCTC-CCCATCCCTTGTCCCC-AAC-CTCTGCCCTGCTTCTGCAGAA-GGT--AACACTGCTGAGGGTTGGGGAGCAGGGCTGCAGGCACAGGGAAAC-TTCCTTCCCACTAAATGGGTAGCAAGGATGGGA-CAGGGAAGAGG i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79703447 142 + 82825804 AGCTGCCTC-CCCATCCCTTGTCCCCTACC-CTCTGCCCTGCTTCTGCAGAA-GGT--AACACTGCTGAGGTTTGGGGAGCAGGGCTGCAGGCACAGGGAAAC-TTCCTTCCCACTAAATGGGTAGCAAGGATGGGA-CAGGGAAGAGG i chlSab2.chr23 C 0 C 0 s colAng1.NW_012117422v1 150379 142 - 815015 AGCTGCCTC-CCCATGCCTTGTCCCCTACC-CTCTGCCCCGCTTCTGCAGAA-GGT--AACCCTGCTGAGGGTTGGGGAGCAGGGCTGCAGGCACAGGGAAAC-TTCCTTCCCACTAAATGGGTAGCAAGGATGGGA-CAGGGACGAGG i colAng1.NW_012117422v1 C 0 C 0 s calJac3.chr2 140363321 142 - 204313951 AGCTGCCTC-CCAATCCCTTGTCCCCTACC-CCTTGCCCTGCTTCTGCGGAA-GGT--AACCCTGCTGTGGGTTGGAGAGCCAGGCTGCAGGCACAGGGAAAC-TTCCTTCCCGGTAAATGGATAGCAGGGATGGGA-CAGGAGAGAGG i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 31570 142 + 10068113 AGCTGTCTT-CTGGTCCCTTGTCCCCTACC-CCTTGCCCTGCTTCTGCAGAA-GGT--AACCCTGCTGAGGGTTGGGAAGCCAGGCTGCAGGCACAGGGAAAC-TTCCTTCCCAGTAAATGGGTAGCAGGGATGGGA-CAGGAGTGAGG i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016108322v1 91288 142 + 99478 AGCTGCCTC-CCAGTCCCTTGTCCCCTACC-CCTTGCCCTCCTTCTGCAGAA-GGT--AACCCTGCTGAGGGTTGGGGAGCCAGGCTGCAGGCACAGGGAAAC-TTCCTTCCCGGTAAATGGGTAGCAGGGATGgga-caggagagagg i cebCap1.NW_016108322v1 I 9 C 0 s aotNan1.NW_018505037v1 2592107 142 + 3417841 AGCTGCCTC-CGGGTCCCTTGTCCCCTACC-CCTTGCCCTGCTTCTGCAGAA-GGT--AACCCTGCTGAGGGTTGGGGAGCCAGGCTGCAGGCACAGGGAAAC-TTCCTTCCCAGTAAATGGGTAGCAGGGATGgga-caggagagagg i aotNan1.NW_018505037v1 I 9 C 0 e macNem1.NW_012020287v1 3846376 439 + 4899514 I e manLeu1.NW_012103876v1 1669883 2082 - 1768974 M a score=189222.000000 s hg38.chr5_KI270795v1_alt 129465 37 + 131892 AGTTGGAAGAGAGGAGAGAGATGAAAGAGGGAGGGGA s panTro5.chr5 178383772 37 + 181907262 AGTTGGAAGAGAGGAGAGGGATGAAAGAGCGCGGGGA i panTro5.chr5 n 40 n 40 s gorGor5.CYUI01000356v1 106628 35 + 152767 AGTTGGAAGAGAGGGGAGGGATGAAAGAGGAGGGG-- i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160368936 37 - 163208435 AGTTGGAAGAGAGGAGAGGGATGAAAGAGGGAGGGGA i nomLeu3.chr2 C 0 I 1 s rheMac8.chr6 3636586 37 - 180051392 AGTTGGAAGAGAGGAGAGGGATGAAAGAAGGAGGGGA i rheMac8.chr6 C 0 I 1 s macFas5.chr6 3825658 37 - 181584905 AGTTGGAAGAGAGGAGAGGGATGAAAGAAGGAGGGGA i macFas5.chr6 C 0 I 1 s cerAty1.NW_012001120v1 3569362 37 - 3647740 AGTTGGAAGAGAGGAGAGGGATGAAAGAAGGAGGGGG i cerAty1.NW_012001120v1 C 0 I 1 s chlSab2.chr23 79703589 37 + 82825804 AGTTGGAAGAGAGGAGAGGGATGAAAGAAGGAGGGGA i chlSab2.chr23 C 0 I 1 s colAng1.NW_012117422v1 150521 37 - 815015 AGTTGGAAGAGAGGAGAGGGATGAAAGAGGGAGGGGA i colAng1.NW_012117422v1 C 0 I 1 s calJac3.chr2 140363463 35 - 204313951 AGTT-GAAGAGACGAGAGGGATGCAAAGGGAAAGGA- i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 31712 35 + 10068113 AGTT-GAAGAGAGGAGAAGGATGCAAGGGGGAGGGA- i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016108322v1 91430 35 + 99478 agtt-gaagagaggagagggatgcgagggggaggga- i cebCap1.NW_016108322v1 C 0 C 0 s aotNan1.NW_018505037v1 2592249 35 + 3417841 agtt-gaagagaggagaggGATGCAAGGGGGAGGGA- i aotNan1.NW_018505037v1 C 0 C 0 e macNem1.NW_012020287v1 3846376 439 + 4899514 I e manLeu1.NW_012103876v1 1669883 2082 - 1768974 M a score=189637.000000 s hg38.chr5_KI270795v1_alt 129502 35 + 131892 AAAAAA-ACAAGAAT-AAAAATCATATCT-AGAGGCAC s panTro5.chr5 3444113 37 - 181907262 AAAAAA-CCAAGCATAAAAAATCATATCTAAGAGGCAC i panTro5.chr5 I 40 C 0 s gorGor5.CYUI01000356v1 106663 35 + 152767 AAAAAA-CCAAGAAT-AAAAATCATATCT-AGAGGCAC i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160368974 35 - 163208435 AAAAAC-CCAAGAAT-AAAAATTGTATCT-AGAGGCAC i nomLeu3.chr2 I 1 C 0 s rheMac8.chr6 3636624 36 - 180051392 AAAAAACCGAAGAAT-AAAAATCTTATCT-AGAGGCAC i rheMac8.chr6 I 1 C 0 s macFas5.chr6 3825696 36 - 181584905 AAAAAACCGAAGAAT-AAAAATCTTATCT-AGAGGCAC i macFas5.chr6 I 1 C 0 s cerAty1.NW_012001120v1 3569400 35 - 3647740 AAAAAA-CGAAGAAT-AAAAATCTTATCT-AGAGGCAC i cerAty1.NW_012001120v1 I 1 C 0 s chlSab2.chr23 79703627 35 + 82825804 AAAAAC-CGAAGAAT-AAAAATCTTATCT-AGAGGCAC i chlSab2.chr23 I 1 C 0 s colAng1.NW_012117422v1 150559 35 - 815015 GAAAAC-CAAAGAAT-AAAAATCATATCT-AGAGGCAC i colAng1.NW_012117422v1 I 1 C 0 s calJac3.chr2 140363498 35 - 204313951 AAAGAC-CCAAGAAT-AAAAATCATATCT-AGAGACAC i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 31747 35 + 10068113 AAAGAC-CCAAGAAT-AAAAATCATATCT-AGAGACAC i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016108322v1 91465 35 + 99478 AAAGAC-CCAAGAAT-AAAAATCATATCT-AGAGACAC i cebCap1.NW_016108322v1 C 0 I 29 s aotNan1.NW_018505037v1 2592284 35 + 3417841 AAAGAC-CCAAGAAT-ACAAATCATATCT-AGAGACAC i aotNan1.NW_018505037v1 C 0 C 0 e macNem1.NW_012020287v1 3846376 439 + 4899514 I e manLeu1.NW_012103876v1 1669883 2082 - 1768974 M a score=89727.000000 s hg38.chr5_KI270795v1_alt 129537 34 + 131892 ATGAAAAAA--TAAAAATTAAATATTAAAAAAATCA s panTro5.chr5 3444150 35 - 181907262 ATAGAAAAAGCTAAAAATTAAATATT-AAAAACTCA i panTro5.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 106698 34 + 152767 ATGAAAAAA--TAAAAATTAAATATTAAAAAAATCA i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160369009 34 - 163208435 atgaaaaaa--taaaaattaaaaattaaaaaaatca i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3636660 31 - 180051392 ATGAAAAAA--TAAAAATTAAAAA---AGAAAAATA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3825732 31 - 181584905 ATGAAAAAA--TAAAAATTAAAAA---AGAAAAATA i macFas5.chr6 C 0 C 0 s cerAty1.NW_012001120v1 3569435 31 - 3647740 ATGAAAAAA--TAAAAATTAAAAA---AGAAAAATA i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79703662 31 + 82825804 ACGAAAAAA--TAAAAATTAAAAA---AGAAAAATA i chlSab2.chr23 C 0 C 0 s colAng1.NW_012117422v1 150594 31 - 815015 ATGAAAAAA--TAAAAATTAAAAA---AGAAAAACA i colAng1.NW_012117422v1 C 0 C 0 s calJac3.chr2 140363533 29 - 204313951 ---AAGAAG--taaatattaaaaatt-ttaaaatC- i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 31782 29 + 10068113 ---AAGAAA--TGAACATTAAAAATT-TAAAAATT- i saiBol1.JH378186 C 0 C 0 s aotNan1.NW_018505037v1 2592319 29 + 3417841 ---AAGAAG--TAAATATTAAACATT-TAAAAATT- i aotNan1.NW_018505037v1 C 0 C 0 e cebCap1.NW_016108322v1 91500 29 + 99478 I e macNem1.NW_012020287v1 3846376 439 + 4899514 I e manLeu1.NW_012103876v1 1669883 2082 - 1768974 M a score=671194.000000 s hg38.chr5_KI270795v1_alt 129571 121 + 131892 ggcctggcgcagtggctcacacctgtaatcccagcactttgggaggctgaggcaggtggatcattcgaggtcaggagttcaagaccaacctggccaacatggtgaaa--ccccgtctctacta s panTro5.chr5 3444185 115 - 181907262 gg-ctgg-gcagtggct-acacctgtaatcccagcac-ttgggaggctgaggcgggt-gatcattcgag--taggagtctaag-caaacctggccaacatggtggaaacccccgtctctacta i panTro5.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 106732 121 + 152767 ggcctggcacggtggttcacacctgtaatcccagcacttcgggaggctgaggcgggtggatcattcgaggtcaggagttcaagaccaacctggccaacatggtgaaa--ccccgtctctacta i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160369043 121 - 163208435 ggcctggcacggtggctcacacctgtaatcccagcactttgggaggctgaggcgggtggatcatttgaggtcaggagttcaagaccagcctggccaacatggtgaaa--ccccgtctctacta i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3636691 121 - 180051392 ggccttgcatggtggctcacacctgaaatcctagcactttatgaggctgaggcaggtggatcattcgaggtcaggagttcgagaccagcctagacaacatggtgaaa--ccccatctctacta i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3825763 121 - 181584905 ggccttgcatggtggctcacacctgaaatcctagcactttatgaagctgaggcaggtggatcattcgaggtcaggagttcgagaccagcctagacaacatggtgaaa--ccccatctctacta i macFas5.chr6 C 0 C 0 s cerAty1.NW_012001120v1 3569466 121 - 3647740 ggcctggcatggtggctcacacctgaaatcctagcactttatgaggctgaggcaggtggatcattcgaggtcaggagttcgagaccagcctagacaacacggtgaaa--cgccatctctacta i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79703693 121 + 82825804 ggcctggcatggtggctcacacctgaaatcctagcactttatgaggctgaggcaggtggatcattcgaggtcaggagttcgagaccagcctagacaacatggtgaaa--ccccatctctacta i chlSab2.chr23 C 0 C 0 s colAng1.NW_012117422v1 150625 121 - 815015 ggcctggcatggtggctcacgcctgaaatcctagcactttgggaggctgaggcaggtggatcatttgaggtcaggagctcgagaccagcctagacaacatggtgaaa--ccccatctctacta i colAng1.NW_012117422v1 C 0 C 0 s calJac3.chr2 140363562 121 - 204313951 ggccaggcacagtggctcatgcctgtaatcccagcacttcgtgaggccaaggtgagtggatcacctgaagtcaggaattcgaggccagcctagccaacatgatgaaa--ccctgtctctacta i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 31811 119 + 10068113 ggccaggtgcagtggctcacgcctgtaatcccagcactttgtgaggccaaggtgagtgaatcacctaaagtcaggagttc--ggccagcctagccaacacgatgaaa--ccctgtctctacta i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016108322v1 91529 121 + 99478 ggccaggcgcagtggctcacgcctgtaataccagcacttcgtgaggccaaggtgagtggatcacctgaggtcaggagttcaaggccagcctagccaacatgatgaaa--ccctgtctctacta i cebCap1.NW_016108322v1 I 29 C 0 s aotNan1.NW_018505037v1 2592348 121 + 3417841 ggccaggcgcagtggctcacgcctgtaatcccagcacttcgtgaggccaaggtgagtggatcacctgaggtcaggagtttgaggccagcctagccaacatgatgaaa--ccctgtctttacta i aotNan1.NW_018505037v1 C 0 C 0 e macNem1.NW_012020287v1 3846376 439 + 4899514 I e manLeu1.NW_012103876v1 1669883 2082 - 1768974 M a score=919332.000000 s hg38.chr5_KI270795v1_alt 129692 143 + 131892 aa--aatacaaaaaatt---agccgg-gcacggtggcacac-cctgtaatcccagctactcgggaggcttaggcaggagaattgt-ttgaacgcgggaggcggaggttgcagtgagccgagat--cactccattgcattc-cagcttgggcaac s panTro5.chr5 3444300 147 - 181907262 aaataatacaaaaaattttaggccggtgcatg--tgcacac-cctgtaatcc--actactccggaggcttaggcaggagaattgtcttgaacgt--gaggcggccgttgcagtgagccgaggtcccactccattgcattcgcagcttgggcaac i panTro5.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 106853 143 + 152767 aa--aatacaaaaaatt---agccgg-gcgtggtggcacac-cctgtaatcccagctactcgggaggctgaggcaggagaattgt-ttgaacgcgggaggcggaggttgcagtgagccgagat--cactccattgcattc-cagcttgggcaac i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160369164 143 - 163208435 aa--aatacaaaaaatt---agccgg-gcatggtggcgcac-cctataatcccagctactcgggaggcttaggcaggagaattgt-ttgaatgtgggaggcggaggttgcagtgagccgagat--cactccattgcattc-cagcttgggcaac i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3636812 140 - 180051392 aa--aatacaaaaaatt---agccag-gcgtggtggtacac-cctgtaatcccagctactcgggagggtgaggcaggagaatcat-ttgaa---aggaggcagaggttgcagtgagctgagat--cacgccattgcattc-cagcctgggcaac i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3825884 143 - 181584905 aa--aatacaaaaaatt---agccag-gcgtggtggtacac-cctgtaatcccagctactcgggagggtgaggcaggagaatcat-ttgaacacgggaggcagaggttgcagtgagctgagat--cacgccattgcattc-cagcctgggcaac i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3846815 143 + 4899514 aa--aatacaaaaaatt---agccag-gcgtggtggtacac-cctgtaatcccagctactcgggagggtgaggcaggagaatcat-ttgaacacgggaggcagaggttgcagtgagctgagat--cacgccattgcattc-cagcctgggcaac i macNem1.NW_012020287v1 I 439 C 0 s cerAty1.NW_012001120v1 3569587 143 - 3647740 aa--aatacaaaaaatt---agccag-gcgtggtggcacac-cctgtaatcccagctactcgggagggtgaggcaggagaatcat-tggaacacgggaggcagaggttgcagtgagctgagat--catgccattgcattc-cagcctgggcaac i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79703814 143 + 82825804 aa--aatacaaaaaatt---agccag-gcatggtagcacac-cctgtaatcccagctactcgggagggtgaggcaggagaatcat-ttgaacacgggaggcagatgttgcggtgagctgagat--catgccattgcattc-cagcctggacaac i chlSab2.chr23 C 0 C 0 s colAng1.NW_012117422v1 150746 143 - 815015 aa--aatacaaaaaatt---agccgg-gcgtgacgacacac-cctgtaatcccagctactcgggaaggtgaggcaggagaatcat-ttgaacacgggaggtggaggttgcagtgagctgagat--cacaccattgcatcc-ctgcctgggcaac i colAng1.NW_012117422v1 C 0 C 0 s calJac3.chr2 140363683 142 - 204313951 aa--attac-aaaaatt---agccag-acatggtggtgcacatgtgtaatcccagctactcgggaggctgaggcaggagaattgc-ttaaa-ccaggaggcagagattgcagtgagctgagat--cttgccactgcactc-cagcctgggtgac i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 31930 143 + 10068113 aa--attac-aaaaatt---agccag-gcatggtggcacacacctataatcccagctactcgggaggctgaggcagaagaattgc-ttgaacccaggaggcaaagattgtagtgagctgagat--cttgccactgcactc-cagcctgggcgac i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016108322v1 91650 143 + 99478 aa--attac-aaaaatt---agccag-gcatggtggcgcacacctataatcccagctactcgggaggctggggcaagagaattgc-ttgaacccaggaggcagagattgcagtgagctgagat--cttgccactgcactc-cagcctgggcgac i cebCap1.NW_016108322v1 C 0 I 46 s aotNan1.NW_018505037v1 2592469 143 + 3417841 aa--attac-aaaaatt---agccag-gcatggtggcacacacctataatcccaggtactcgggaggctgaggcaggagaattgc-ttgaacccggggggcagagattgcagtgagctgagat--cttgccactgcactc-cagcctgggcgac i aotNan1.NW_018505037v1 C 0 C 0 e manLeu1.NW_012103876v1 1669883 2082 - 1768974 M a score=152908.000000 s hg38.chr5_KI270795v1_alt 129835 40 + 131892 aagagcaaaactccgtctcaaaaaagaaaaaaaaTTTAAT s panTro5.chr5 3444447 39 - 181907262 aa-agcaaaactccgtctcataaaagaaaaaaaatttaat i panTro5.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 106996 40 + 152767 aagagcaaaactccgtctcaaaaaaagaaaaaaTTTTAAT i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160369307 40 - 163208435 aagagcaaaactctgtctcaaaaaagaaaaaaattttaat i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3636952 35 - 180051392 aagagcaaaactccatct-----aaaaaaaaaattaaaaa i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3826027 38 - 181584905 aagagcaaaactccatctc--aaaaaaaaaaaattaaaaa i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3846958 40 + 4899514 aagagcaaaactccatctcaaaaaaaaaaaaaattaaaaa i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012001120v1 3569730 37 - 3647740 aagagcaaaactccatctc---aaaaaaaaaaattaaaaa i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79703957 37 + 82825804 aagagcaaaactccatctc---aaaaaaaaaaattaaaaa i chlSab2.chr23 C 0 C 0 s colAng1.NW_012117422v1 150889 38 - 815015 aagagcaaaactccatctc--aaaaaaaaaaatttaaaaa i colAng1.NW_012117422v1 C 0 C 0 s calJac3.chr2 140363825 36 - 204313951 -agagtaagactcaatctc---aaaaataaaaagaaaaaa i calJac3.chr2 C 0 I 9 s saiBol1.JH378186 32073 36 + 10068113 -agggtgagactctatttc---aaaaacaaaaagaaaaaa i saiBol1.JH378186 C 0 I 10 s aotNan1.NW_018505037v1 2592612 36 + 3417841 -agagtgagactccatctc---aaaaataaaaagaaaaaa i aotNan1.NW_018505037v1 C 0 I 3 e cebCap1.NW_016108322v1 91793 46 + 99478 I e manLeu1.NW_012103876v1 1669883 2082 - 1768974 M a score=1877940.000000 s hg38.chr5_KI270795v1_alt 129875 276 + 131892 TTAAAAAA---G-TTTTCTATGAACCCTC-CAATAAGAGAGGTAAGCATA-CATATAAATAAGTGAATTGTGAGTAAAATAAGTGC--ATAATAAGCAA-TATCGCATAAAAATTGTAC-CATGAACTAGGCTCCATGCTGTTTCTTTTGAGAGGGTtcagaccaaggc-gtttcccagacg--aggcaggtcccttcctggga-atg-acccctcatcagcctcagacggtttcg--tcttagaaaagtttgccctaaatcaaatggtttcttctctatcagaaaccacata s panTro5.chr5 3444486 281 - 181907262 taaaaaaa-TTG-TTTTCTATCAACCTCCACAATAAGAGAGGTAACAACATCATAT-AATAAGTGAATTGTAGTAAAAATAAGTGCTAATAATAAGCAACTATCG--TAAAAATTGTACGGACGAACTAGGCT-CATG-TGTTTC--TTGAGAGGG-TCAGACCAAGGCAGTTTCCCAGACAGCAGGCAG--TCCTTCCTGGGACATGAACCCCTCATCAGCCTCAGACGGTTTTGGATCTTAGAAAAGTTTGCCCTAAATCAAATGGTTTCTTCTCTATCAGAAACCACTAA i panTro5.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 107036 276 + 152767 TTAAAAAA---GTTTTTCTATGAACCCTC-C-ATAAGAGAGGTAAGCATA-CATATAAATAAGTGAATTGTGAGTAAAATAAGTGC--ATAATAAGCAA-TATCGTATAAAAATTGTAC-CATGAACTAGGCTCCATGCTGTTTCTTTTGAGAGGGTTCAGACCAAGGC-GTTTCCCAGACG--AGGCAGGTCCCTTCCTGGGA-ATG-ACCCCTCATCAGCCTCAGACGGATTGG--TCTTAGAAAAGTTTGCCCTAAATCAAATGGTTTCTTCTCTATCAGAAACCACATA i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160369347 278 - 163208435 ttaaaaaa-taG-TTTTCTATGAACCTGC-CAATATGAGAGGTAAGCATA-CATATAAATAAGTGAATTACAAGTAAAATAAGTGC--ATAATAAGCAA-TAGCGTATAAAACTTGTAC-CACGAACTAGGCTCCATGCCATTTCTTTTGAGAGCGTTCAGACCAAGGC-ATTTCCCAGACA--AGGCAGGTCCCTCCCTGGGA-ATG-accccttatcagcctcagatggtttgg--tcttagaaaagtttgccctaaatcaaatggtttcttctctatcagaaaccacaga i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3636987 279 - 180051392 ttaaaaaaGTAG-TCTTCTATGAACCTGC-CAATAAGAGAGGTAAGTCTA-CATGTAAATCAGTGAATTATGAGTAAAATAAGTGC--ATAATAAGCAA-TATGATATAAAAATTGTAC-CATGAACTAGGCTCCATGCTGTTTCTTTTGAGAGGGTTCAGACCAAGGC-ATTTCCCAGACA--AGGCAGGTCCCTTCCTGGGA-ATG-GCCCCTTATCAGCCTCAGACGGTTTGG--TGTTAGAAAAGTTTGCCCTAAATCAAATGGCTTCTTCTCCATCAGAAACCACATA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3826065 279 - 181584905 ttaaaaaaGTAG-TCTTCTATGAACCTGC-CAATAAGAGAGGTAAGTCTA-CATGTAAATCAGTGAATTATGAGTAAAATAAGTGC--ATAATAAGCAA-TATGATATAAAAATTGTAC-CATGAACTAGGCTCCATGCTGTTTCTTTTGAGAGGGTTCAGACCAAGGC-ATTTCCCAGACA--AGGCAGGTCCCTTCCTGGGA-ATG-GCCCCTTATCAGCCTCAGACGGTTTGG--TGTTAGAAAAGTTTGCCCTAAATCAAATGGCTTCTTCTCCATCAGAAACCACATA i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3846998 279 + 4899514 ttaaaaaaGTAG-TCTTCTATGAACCTGC-CAATAAGAGAGGTAAGTCTA-CATGTAAATCAGTGAATTATGAGTAAAATAAGTGC--ATAATAAGCAA-TATGATATAAAAATTGTAC-CATGAACTAGGCTCCATGCTGTTTCTTTTGAGAGGGTTCAGACCAAGGC-ATTTCCCAGACA--AGGCAGGTCCCTTCCTGGGA-ATG-GCCCCTTATCAGCCTCAGACGGTTTGG--TGTTAGAAAAGTTTGCCCTAAATCAAATGGCTTCTTCTCCATCAGAAACCACATA i macNem1.NW_012020287v1 C 0 M 621 s cerAty1.NW_012001120v1 3569767 279 - 3647740 ttaaaaaaGTAG-TCTTCTATGAACCTGC-CAATAAGAGAGGTAAGTCTA-CATGTAAATCAGTGAATTATGAGTAAAATAAGTGC--ATAATAAGCAA-TATGATATAAAAATTGTAC-CATGAACTAGGCTCCATGCTGTTTCTTTTGAGAGGGTTCAGACCAGGGC-ATTTCCCAGACA--AGGCAGGTCCCTTCCTGGGA-ATG-GCCCCTTATCAGCCTCAGATGGTTTGG--TCTTAGAAAAGTTTGCCCTAAGTCAAATGGCTTCTTCTCCATCAGAAACCACATA i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79703994 279 + 82825804 ttaaaaaaGTAG-TCTTCTATAAACCTGC-CAATAAGAGAGGTAAGTCTA-CATGTAAATCAGTGAATTATGAGTAAAATAAGTGC--ATAATAAGCAA-TATGATATAAAAATTGTAC-CATGAACTAGGCTCCATGCTGTTTCTTTGGAGAGGGTTCAGACCAAGGC-ATTTCCCAGACA--AGGCAGGTCCCTTCCTGGGA-ATG-GCCCCTTATCAGTCTCAGACGGTTTGG--TCTTAGAAAAGTTTGCCCTAAATCAAATGGCTTCTTCTCCATCAGAAACCACATA i chlSab2.chr23 C 0 C 0 s colAng1.NW_012117422v1 150927 279 - 815015 ttaaaaaaGTAG-TCTTCTATGAACCTGC-CAATAAGAGAGGTAAGTCTA-CATATAAATCAGTGAATTATGAGTAAAACAAGTGC--ATAATAAGCAA-TATGATATAAAAATTGTAC-CACGAACTAGGCTCCATGCTGTTTCTTCTGAGAGGGTTCAGACCAAGGC-ATTTCCCAGACA--AGGCAGGTCCCTTCCTGGGA-ATG-ACCCTTTATCAGTCTCAGATGGTTTGG--TCTTAGAAAAGTTTGCCCTAAATCAAATGGCTTCTTCTCCATCAGAAACCACATA i colAng1.NW_012117422v1 C 0 C 0 s calJac3.chr2 140363870 275 - 204313951 -TAAAAA--TAT-TCTTCTGTGAACCTGC-CAATAAGAGAGGTAAGCCTA-CATATAAATAAGTAAATAATGAGTAAAATAAGTGC--ATCATAAGCAA-TATGGTATAAAAATTGTGC-CATGAACTAGGTTCCATGGTGTTTCTTTTGAGAAGGCTCAGACCAAGGC-ATTT-CCAGACA--AGGCAGGTCCCTTCCTGGGA-ATG-ACCCCTTATCAGCCTCAGATGGTTTGG--TCTTAGAAATGTTTGCCCTAAATAGAATGGTTTCTTCTCTGTCAGAAACCACATG i calJac3.chr2 I 9 C 0 s saiBol1.JH378186 32119 275 + 10068113 -TAAAAA--TAT-TCTTCTGTGAACCTGC-CAATAAGAGAAGTAAGCCTA-CATATAAATAACTAAATAATGAGTAAAATAAGAGC--ATCATAAGCAA-GATGGTATATAAATTGTGC-CATGAACTAGGCTCCATGGTGTTTCTTTTGAGaaggctcagaccaaggc-attt-ccagaca--aggcaggtcccttcctggga-atg-accccttatcagcctcagatggtttgg--tcttagaaatgtttgccctaaatagaatggtttcttctctgtcggaaaccacata i saiBol1.JH378186 I 10 C 0 s cebCap1.NW_016108322v1 91839 275 + 99478 -TAAAAA--TAT-TCTTCTGTGAACCTGC-CAATAAGAGAGGTAAGCCTA-CATataaataagtaaataatgagtaaaataaatGC--ATCATAAGCAA-TATAGTATAAAAATTGTGC-CATGAACTAGGCTTCGTGGTGTTTCTTTTGAGAAGGCTCAGACCAAGGC-ATTT-CCAGACA--AGGTAGGTCCCTTCCTGGGA-ATG-AACCCTTAACAGCCTCAGATGGTTTGG--TCTTAGAAATGTTTGCCCTAAATAGAATGGTTTCTTCTCTGTCAGAAACCACATA i cebCap1.NW_016108322v1 I 46 C 0 s aotNan1.NW_018505037v1 2592651 275 + 3417841 -TAAAAA--TAT-TCTTCTGTGAACCTGC-CAATAAGAGAGGTAAGCCTG-CATACAAGTAAGTAAATAATGAGTAAAATAAGTGC--CTCGTAAGCAA-CATGGCATAAAAATTGTGC-CGTGAACTAGGCTCCATGGTGTTTCTTTTGAGaaggctcagaccaaggc-attt-ccagaca--aggcaggtcccttcctggga-atg-accccttatcagcctcagatggtttgg--tcttagaaatgtttgccctaaatagaatggtttcttctctgtcagaaaccacata i aotNan1.NW_018505037v1 I 3 C 0 e manLeu1.NW_012103876v1 1669883 2082 - 1768974 M a score=88147.000000 s hg38.chr5_KI270795v1_alt 130151 14 + 131892 tgttaaaatgtgcc s panTro5.chr5 3444767 12 - 181907262 TGTTAAAA--TTCC i panTro5.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 107312 14 + 152767 TGTTAAAATGTGCC i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160369625 14 - 163208435 tgttaaaatgtgcc i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3637266 14 - 180051392 TGTTAAAATGTGCT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3826344 14 - 181584905 TGTTAAAATGTGCC i macFas5.chr6 C 0 C 0 s cerAty1.NW_012001120v1 3570046 14 - 3647740 TGTTAAAATGTGCC i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79704273 14 + 82825804 TGTTAAAATGTGCC i chlSab2.chr23 C 0 C 0 s colAng1.NW_012117422v1 151206 14 - 815015 TGTTAAAATATGCC i colAng1.NW_012117422v1 C 0 C 0 s calJac3.chr2 140364145 14 - 204313951 TGTTAAAATGTGCC i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 32394 14 + 10068113 tgttaaaatgtgcc i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016108322v1 92114 14 + 99478 TGTTAAAACGTGCC i cebCap1.NW_016108322v1 C 0 C 0 s aotNan1.NW_018505037v1 2592926 14 + 3417841 tgttaaaatgtgcC i aotNan1.NW_018505037v1 C 0 I 1211 e macNem1.NW_012020287v1 3847277 621 + 4899514 M e manLeu1.NW_012103876v1 1669883 2082 - 1768974 M a score=667313.000000 s hg38.chr5_KI270795v1_alt 130165 137 + 131892 gctGATTTAAA-----AGTTGAAGGCAGATGTTGAAGACTTCTA-CAGGCAAAACTAAT-CAAATCTGATTGATGTA--TT-TTTTATAAGACA-TTGGAGA----GCATTCCTTGATGTTGAG-ATTTGCACAGGTTTGTTGGAAGTGGGAT s panTro5.chr5 3444779 138 - 181907262 GCTGATTTAAA-----AGTTGAAGGCAGATGTTGAA-ACTTCTATCAGGCCAAAATAATGCAAATCTGATTGATGTA--TTGTTTTATAAGACAGTTGGAGA----GCATTCCTCTATGTTGA--ATTTGCACAGGTTT-TTGGAATGGGGAT i panTro5.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 107326 137 + 152767 GCTGATTTAAA-----AGTTGAAGGCAGATGTTGAAGACTTCTA-CAGGCAAAACTAAT-CAAATCTGATTGATGTA--TT-TTTTATAAGACA-TTGGAGA----GCATTCCTTGATGTTGAG-ATTTGCACAGGTTTGTTGGAAGTGGGAT i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160369639 136 - 163208435 gctGATTTAAA-----AGTTGAAGGCAGATGTTGAAGACTTCTA-CAGGCAAAACTAAT-CAAATCTGATTGATGTC--TT-TTTTATAAGACA-TTGGAGA----GCATTCCTTGATGTTCAG-ATTTGCATAGCTTTGTTGGAAGT-GGAT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3637280 141 - 180051392 GCTGATTTAAA-AGTTAGTTGAAGGCAGATGTTGAAGACTTCTA-CAGGCAAAACTAAT-CAAATGTTATTTATGTA--TT-TTTTATAAGACA-TTGGAGG----GCATTCCTTGATGTTCAG-ATTTGCACAGGTTTGTTGGAAGTGGGAT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3826358 141 - 181584905 GCTGATTTAAA-AGTTAGTTGAAGGCAGATGTTGAAGACTTCTA-CAGGCAAAACTAAT-CAAATGTTATTTATGTA--TT-TTTTATAAGACA-TTGGAGG----GCATTCCTTGATGTTCAG-ATTTGCACAGGTTTGTTGGAAGTGGGAT i macFas5.chr6 C 0 C 0 s cerAty1.NW_012001120v1 3570060 141 - 3647740 GCTGATTTAAA-AGTTAGTTGAAGGCAGACGTTGAAGACTTCTA-CAGGCAAAACTAAT-CAAATGTTATTTATGTA--TT-TTTTATAAGACA-TTGAAGA----GCATTCCTTGATGTTCAG-ATTTGCACAGATTTGTTGGAAGTGGGAT i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79704287 141 + 82825804 GCTGATTTAAA-AGTTAGTTGAAGGCAGACGCTGAAGACTTCTA-CAGGCAAAACTAAT-CAAATGTTATTTATGTA--TT-TTTTATAAGACA-TTGGAGG----GCATTCCTTGATGTTCAG-ATTTGCACAGGTTTGTTGGAAGTGGGAT i chlSab2.chr23 C 0 C 0 s colAng1.NW_012117422v1 151220 141 - 815015 GCTAATTTAAA-AGTTAGTTGAAGGCAGATATTGGAGACTCCTA-TAGGCAAAACTAAT-CCAATGTTATTTATGTA--TT-TTTTATAAGACA-TTGGAGA----GCATTCCTTGATGTTCAG-ATTTGCACAGGTTTGTTGGAAGTGGGAT i colAng1.NW_012117422v1 C 0 I 29 s calJac3.chr2 140364159 145 - 204313951 GCTGATTTAAAAAGTTAGTCAAAGGCAGATGCTGAAGACTTCTA-CAGGCCAAACTAAT-CAAACCTTATTTATGTGTTTT-TTTTATAAGACA-TTGGAGA----GCATTCCTTGATGTTCAGAAATTCCACAGGTTTGTTGGAAGTGGGAC i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 32408 143 + 10068113 gctGATTTAAAAAGTTAGTCGAAGGCAGATGCTGAAGACTTCTA-CAGGCCAAACTAAT-CAAATCTTATTTATGTA--TT-TTTTATAAGACA-TTGGAGA----GCATTCCTTGATGTTCAGAAATTCCACAGGTTTGTTGGAAGTAGGAC i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016108322v1 92128 147 + 99478 GCTGATTTAAAAAGTTAGTCTGAGGCAGACGCTGAAGACTTCTA-TGGGCCAAACTAAT-CAAATCTTATTTACGTA--TT-TTTTATAAGACA-TTGGAGACCATTCATTCCTTGATGTTCAGAGATTCCACAGGTTTGTTGGAAGTGGGAC i cebCap1.NW_016108322v1 C 0 C 0 e macNem1.NW_012020287v1 3847277 621 + 4899514 M e aotNan1.NW_018505037v1 2592940 1211 + 3417841 I e manLeu1.NW_012103876v1 1669883 2082 - 1768974 M a score=107826.000000 s hg38.chr5_KI270795v1_alt 130302 25 + 131892 AGACTAGAGT-TAAGGGAACCTA-TGC s panTro5.chr5 3444917 27 - 181907262 AGACTAGAGTCTAAGGGAACCTATTGC i panTro5.chr5 C 0 I 1 s gorGor5.CYUI01000356v1 107463 25 + 152767 AGACTAGAGT-TAAGGGAACCTA-TGC i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160369775 25 - 163208435 AGACTAGAGT-TGAGGGAACCTA-TGC i nomLeu3.chr2 C 0 I 1 s rheMac8.chr6 3637421 25 - 180051392 AGACTAGAGT-TAAGGGAACCTA-TGC i rheMac8.chr6 C 0 I 1 s macFas5.chr6 3826499 25 - 181584905 AGACTAGAGT-TAAGGGAACCTA-TGC i macFas5.chr6 C 0 I 1 s cerAty1.NW_012001120v1 3570201 25 - 3647740 AGACTAGAGT-TAAGGGAACCTA-TGC i cerAty1.NW_012001120v1 C 0 I 1 s chlSab2.chr23 79704428 25 + 82825804 AGACTAGAGT-TAAGGGAACCTA-TGC i chlSab2.chr23 C 0 I 1 s calJac3.chr2 140364304 25 - 204313951 AGACTAGAGC-TAAGGGAATCTA-TGT i calJac3.chr2 C 0 I 1 s saiBol1.JH378186 32551 25 + 10068113 AGACTAGAGC-TAAGGGAATCGA-TGT i saiBol1.JH378186 C 0 I 1 s cebCap1.NW_016108322v1 92275 25 + 99478 AGACTAGAGC-TAAGGGAATCGA-TGT i cebCap1.NW_016108322v1 C 0 I 1 e macNem1.NW_012020287v1 3847277 621 + 4899514 M e aotNan1.NW_018505037v1 2592940 1211 + 3417841 I e colAng1.NW_012117422v1 151361 29 - 815015 I e manLeu1.NW_012103876v1 1669883 2082 - 1768974 M a score=373087.000000 s hg38.chr5_KI270795v1_alt 130327 79 + 131892 GACAATAAGTCAGAAAATACGGGGTCAG-AAAAAGCCAAGTGTCTGCTGGAATGGAAAGGAGGGGACACTCTG-AAGAGAT s panTro5.chr5 3444945 78 - 181907262 GACAATAAGTC-GAAAATA-ACGGTCAGAAAAAAGCCAAGTGTCTGCTGGAAT-GAAAGGCGGGACAACTCTGAAAGAGAT i panTro5.chr5 I 1 C 0 s gorGor5.CYUI01000356v1 107488 79 + 152767 GACAATAAGTCAGAAAATACGGGGTCAG-AAAAAGCCAAGTGTCTGCTGGAATGGAAAGGAGGGGACACTCTG-AAGAGAT i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160369801 79 - 163208435 GACAATAAGTCAGAAAATACGGGGTCAG-AAAAAGCTAAGTGTCTACTGGAATAGAAAGGAGGGGACACTCTG-AAGAGAT i nomLeu3.chr2 I 1 C 0 s rheMac8.chr6 3637447 79 - 180051392 GCCAGTAAGTCAGAAAATACGGGGTCAG-AAAAAGCCAAGGCTCTGCTGGAATGGAAAGGAGAAGACACTCCC-AAGAGAT i rheMac8.chr6 I 1 C 0 s macFas5.chr6 3826525 79 - 181584905 GCCAGTAAGTCAGAAAATACGGGGTCAG-AAAAAGCCAAGTCTCTGCTGGAATGGAAAGGAGAAGACACTCCC-AAGAGAT i macFas5.chr6 I 1 C 0 s cerAty1.NW_012001120v1 3570227 79 - 3647740 GACAGTAAGTCAGAAAACACGGGGTCAG-AAAAAGCCAAGTCTCTGCTGGAATGGAAAGGAGAAGACACTCCC-TAGAGAT i cerAty1.NW_012001120v1 I 1 C 0 s chlSab2.chr23 79704454 79 + 82825804 GACAGTAAGTCAGAAAATACGGGGTCAG-AAAAAGCCAAGTCTCTGCTGGAATGGAAAGGAGAAGACACTCCC-AAGAGAT i chlSab2.chr23 I 1 C 0 s colAng1.NW_012117422v1 151390 76 - 815015 GACAGTAAGTCAGAAAATACGGGGTCAG-AAAAAGCTAAGTCTCTGCTGGAATGGAA---AGAAGACACTCCC-AAGAGAT i colAng1.NW_012117422v1 I 29 C 0 s calJac3.chr2 140364330 79 - 204313951 GACAATAAGTCAGAAAATACAGAGCCAG-AAAAAGCCAAGGGTCTGCTGGAATGGAAAGGAGGGGGCACTCTC-AAGAGAT i calJac3.chr2 I 1 C 0 s saiBol1.JH378186 32577 77 + 10068113 GACAATACGTCAGAAAATATAGAGCCAG-AAAAAGCCAAGGGTCTGCTGGAATGGAAAGGAGGGGACA--CTC-AAGAGAT i saiBol1.JH378186 I 1 C 0 s cebCap1.NW_016108322v1 92301 79 + 99478 GACAATAAGTCAGAAAATATAGAGCCAG-AAAAAGCCAAGGGTCTGCTGGAATGGAAAGGAGGGGACACTCTC-AAGAGAT i cebCap1.NW_016108322v1 I 1 C 0 e macNem1.NW_012020287v1 3847277 621 + 4899514 M e aotNan1.NW_018505037v1 2592940 1211 + 3417841 I e manLeu1.NW_012103876v1 1669883 2082 - 1768974 M a score=167286.000000 s hg38.chr5_KI270795v1_alt 130406 60 + 131892 ATTTCggct-gggctcagtggctcacacctgtaatcccagcactttgggaggcc--gaggcgg s panTro5.chr5 3445023 63 - 181907262 ATTTCGGCTGgggttcagtggtgcacacctgtaatcccagcactttgggaggcgcagaggcgg i panTro5.chr5 C 0 I 15 s gorGor5.CYUI01000356v1 107567 60 + 152767 ATTTCggct-gggctcagtggctcacacctgtaatcccagcactttgggaggcc--gaggcgg i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160369880 60 - 163208435 ATTTCggct-gggcgtggtggctcacacctgtaatcccagcactttgggaggcc--gaggcag i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3637526 60 - 180051392 ATTTCAgcc-gggcgcagcagctcacgcctgtaatcccagcactttgggaggcc--gaggcgg i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3826604 60 - 181584905 ATTTCAgcc-gggcgcagcagctcacgcctgtaatcccagcactttgggaggcc--gaggcgg i macFas5.chr6 C 0 C 0 s cerAty1.NW_012001120v1 3570306 60 - 3647740 ATTTCAgcc-gggcgcggcagctcacccctgtaacctcagcactttgggaggcc--gaggcgg i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79704533 60 + 82825804 ATTTCAgcc-gggcgcggcagctcacgcttgtaatcccagcactttgggaggcc--gaggcgg i chlSab2.chr23 C 0 C 0 s colAng1.NW_012117422v1 151466 60 - 815015 ATTTCAgcc-gggtgcggcagctcacgcctgtaatcctggcgctttgggaggcc--gaggcgg i colAng1.NW_012117422v1 C 0 C 0 e cebCap1.NW_016108322v1 92380 0 + 99478 C e saiBol1.JH378186 32654 0 + 10068113 C e calJac3.chr2 140364409 0 - 204313951 C e macNem1.NW_012020287v1 3847277 621 + 4899514 M e aotNan1.NW_018505037v1 2592940 1211 + 3417841 I e manLeu1.NW_012103876v1 1669883 2082 - 1768974 M a score=28623.000000 s hg38.chr5_KI270795v1_alt 130466 11 + 131892 gcagatcacga s gorGor5.CYUI01000356v1 107627 11 + 152767 gcagatcacga i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160369940 11 - 163208435 gcagatcacga i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3637586 11 - 180051392 gcagatcacga i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3826664 11 - 181584905 gcagatcacga i macFas5.chr6 C 0 C 0 s cerAty1.NW_012001120v1 3570366 11 - 3647740 gcagatcacga i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79704593 11 + 82825804 gcagatcacga i chlSab2.chr23 C 0 C 0 s colAng1.NW_012117422v1 151526 11 - 815015 gcagatcatga i colAng1.NW_012117422v1 C 0 C 0 e cebCap1.NW_016108322v1 92380 0 + 99478 C e saiBol1.JH378186 32654 0 + 10068113 C e calJac3.chr2 140364409 0 - 204313951 C e macNem1.NW_012020287v1 3847277 621 + 4899514 M e aotNan1.NW_018505037v1 2592940 1211 + 3417841 I e manLeu1.NW_012103876v1 1669883 2082 - 1768974 M e panTro5.chr5 3445086 15 - 181907262 I a score=40532.000000 s hg38.chr5_KI270795v1_alt 130477 12 + 131892 ggtcaggagatt s panTro5.chr5 3445101 12 - 181907262 ggtcaggagatc i panTro5.chr5 I 15 C 0 s gorGor5.CYUI01000356v1 107638 12 + 152767 ggtcaggagatc i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160369951 12 - 163208435 ggtcaggagatc i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3637597 12 - 180051392 ggtcaggagatc i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3826675 12 - 181584905 ggtcaggagatc i macFas5.chr6 C 0 C 0 s cerAty1.NW_012001120v1 3570377 12 - 3647740 ggtcaggagatc i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79704604 12 + 82825804 ggtcaggagatc i chlSab2.chr23 C 0 C 0 s colAng1.NW_012117422v1 151537 12 - 815015 ggtcaggagatc i colAng1.NW_012117422v1 C 0 C 0 e cebCap1.NW_016108322v1 92380 0 + 99478 C e saiBol1.JH378186 32654 0 + 10068113 C e calJac3.chr2 140364409 0 - 204313951 C e macNem1.NW_012020287v1 3847277 621 + 4899514 M e aotNan1.NW_018505037v1 2592940 1211 + 3417841 I e manLeu1.NW_012103876v1 1669883 2082 - 1768974 M a score=676546.000000 s hg38.chr5_KI270795v1_alt 130489 217 + 131892 gagaccatcctggctaacatggtgaaactccgtctctact--aaaaatacaaaaacaaaattagccgggcgtggtggcgggcacctgtagtcccagctactcgggaggctgaggcgggagaatg-gcgtgaacccaggaggtggagcttgcagtgagtcgaga-ttgtgccact-gga-ctccagc-ctgggcgacagag-caagactctgtctcaaaaaaaaaa s panTro5.chr5 3445113 214 - 181907262 gagaccatcctgactaagcaggtgaaaacccgtctctacttaagaaatac-aaaacaaaattaccacagcgtgg-agcgg--acctctagtcccagcta--cggga-gctgag--cggagaatgcgcgtg-acccaggatgtggagcttgcagtga-ccgagacttgtgccactcggagctccagctctgggcgacagagtcaagactctgtctcaaaaaaaaaa i panTro5.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 107650 217 + 152767 gagactatcctggctaacatggtgaaactccgtctctact--aaaaatacaaaaacaaaattagctgggcgtggtggcgggcacctgtagtcccagctactcgggaggctgaggcgggagaatg-gcgtgaacccaggaggtggagcttgcagtgagccgaga-tcatgccact-gga-ctccagc-ctgggcgacagag-caagactctgtctcaaaaaaaaaa i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160369963 217 - 163208435 gagaccatcctggctaacatggtgaaaccctgtatctact--aaaaatacaaaaacaaaattagccgggtatggtggcgggcgcctgtagtcccagctactggggaggctgaggcaggagaatt-gcgtgaacccaggaggtggagcttgcagtgagcagaga-tcgtgccact-gga-ctccagc-ctgggcgacagag-caagactctgtctcaaaaaaaaaa i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3637609 205 - 180051392 gagaccatcctggctaaca--gtgaaaccccatctctact--aaaaatacaaaaccaaaattagctgggcgtggtggtgggcgcctgtagtcccagctactcaggaggctgaggcgggagaatg-gtgtgaacccaggaggtggagtttgcagtgagccagaa-tcgcgccact-gga-ctccagc-ctgggt-----------gactccatttcaaaaaaaaaa i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3826687 205 - 181584905 gagaccatcctggctaaca--gtgaaaccccatctctact--aaaaatacaaaaccaaaattagctgggcgtggtggtgggcgcctgtagtcccagctactcaggaggctgaggcgggagaatg-gtgtgaacccaggaggtggagtttgcagtgagccagaa-tcgcgccact-gga-ctccagc-ctgggt-----------gactccgtttcaaaaaaaaaa i macFas5.chr6 C 0 C 0 s cerAty1.NW_012001120v1 3570389 205 - 3647740 gagaccatcctggctaaca--gtgaaaccccatctctact--aaaaatacaaaaacaaaattagctgggcgtggtggcgggcgcctgtagtcccagctactcaggaggctgaggcgggtgaatg-gtgtgaacccaggaggtggagtttgcagtgagccagaa-tcgcgccact-gga-ctccagc-ctgggt-----------gactccgtttcaaaaaaaaaa i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79704616 200 + 82825804 gagaccatcctggctaaca--gtgaaaccccatctctact--aaaaatacaaaaacaaaattagctgggcgtggtggcaggcgcctgtagtcccagctactcaggaggctgaggcgggagaatg-gcgtgaacccaggaggtggagtttgcagtgagccagaa-tcgcgccact-gga-ctccagc-ctgggt-----------gactccgtttc-----aaaaa i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1671965 205 - 1768974 gagaccatcctggctaaca--gtgaaaccccatctctact--aaaaatacaaaaccaaaattagctgggcgtggtggtgggcgcctgtagtcccagctactcaggaggctgaggcgggagaatg-gtgtgaacccaggagttggagtttgcagtgagccagaa-tcacgccact-gga-ctccagc-ctgggt-----------gactccgtttcaaaaaaaaaa i manLeu1.NW_012103876v1 M 2082 C 0 s colAng1.NW_012117422v1 151549 207 - 815015 gagaccatcctggccaacacggtgaaaccccatctctact--aaaaatacaaaaccaaaattagctgggcgtggtggtgggcgcctgtaatcccagctactcaggaggctgaggcgggagaatg-gtttgaacccaggaggtggagtttgcagtgagccagaa-tcgcaccact-gga-ctccagc-ctgggt-----------gactgcgtttcaaaaaaaaaa i colAng1.NW_012117422v1 C 0 C 0 e cebCap1.NW_016108322v1 92380 0 + 99478 C e saiBol1.JH378186 32654 0 + 10068113 C e calJac3.chr2 140364409 0 - 204313951 C e macNem1.NW_012020287v1 3847277 621 + 4899514 M e aotNan1.NW_018505037v1 2592940 1211 + 3417841 I a score=34930.000000 s hg38.chr5_KI270795v1_alt 130706 32 + 131892 aaaaaaaaaaaaaaaaaGGTATTTCTAGGACA s panTro5.chr5 3445327 32 - 181907262 aataaaaataaaaaaaTCAATTTCCTAGGACA i panTro5.chr5 C 0 C 0 s gorGor5.CYUI01000356v1 107867 26 + 152767 aaaaaaaaaaaGA------TATTTCTAGGACG i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160370180 16 - 163208435 aGA----------------TATTTCTAGGACA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3637814 15 - 180051392 ------------aa-----aaaTCCTAGGACA i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3826892 15 - 181584905 ------------aa-----aaaTCCTAGGACA i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3847901 27 + 4899514 aaaaaaaaaaaaaa-----aaaTCCTAGGACA i macNem1.NW_012020287v1 M 621 C 0 s cerAty1.NW_012001120v1 3570594 16 - 3647740 -----------aaa-----aaaTCCTAGGACA i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79704816 18 + 82825804 ---------aaaaa-----aaaTCCTAGGACA i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1672170 18 - 1768974 ---------aaaaa-----aaaTCCTAGGACA i manLeu1.NW_012103876v1 C 0 C 0 s colAng1.NW_012117422v1 151756 26 - 815015 -caaaaaacaaaaa-----aaTTCCTAGGACA i colAng1.NW_012117422v1 C 0 C 0 e cebCap1.NW_016108322v1 92380 0 + 99478 C e saiBol1.JH378186 32654 0 + 10068113 C e calJac3.chr2 140364409 0 - 204313951 C e aotNan1.NW_018505037v1 2592940 1211 + 3417841 I a score=1587929.000000 s hg38.chr5_KI270795v1_alt 130738 227 + 131892 GAATAAACAAAAGTCAGTGACTGATTGAGATGGCGGGGTGG-GCAATGGGGAAGGGATGTATAGGTAGACTCTTAAGTCAGAAG-CCTTACTGAAATCAGCCAGA-AAGAG-CTGGGATCTTCTTCAATCGTGATCTCAATTAATGAAGGCCCTC--ACCTCCTAGCCCTTCAATCATCTCCACTCAC-CAGCAACTGTCTT-CATCAATATCACCCTTCAGCAGGCAGCTCCAC s panTro5.chr5 3445359 227 - 181907262 GAATAAACAAAAGTCAGTG-CTTATAG-GATGGCGGGGTGGCGCAATGGG--AAGGATGTATAGGTAGACTCTTAATTCAGAAGCCCTTACTGAAATCA-CCAGACAAGAGCCTGGGATCTTCTTCAA--GTGATCTCAATTAATGAAGGCCCTCCACCCTCCTAGCCCTTCCAAGA-CTCCACACACGCAGCAACTGTCTTCCATCAATATCACCGTTCAGCAGGCAGCTCCAC i panTro5.chr5 C 0 I 6 s gorGor5.CYUI01000356v1 107893 227 + 152767 GAATAAACAAAAGCCAGTGACTGATTGAGATAGCGGGGTGG-GCAATGGGGAAGGGATGTATAGGTAGACTCTTAAGTCAGAAG-CCTTACTGAAATCAGCCAGA-AAGAG-CTGGGATCTTCTTCAATCGTGATCTCAATTAATGAAGGCCCTC--ACCTCCTAGCCCTTCAATCATCTCCACACAC-CAGCAACTGTCTT-CATCAATATCACCCTTCAGCAGGCAGCTCCAC i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160370196 223 - 163208435 GAATAAACAAAAGTCGGTGACTGC----GATAGCGGGGTGG-GCAACGGGGAAGGGATGGATAGGTAGACTGTTAAGTCAGAAG-CCTTACTGAAATCCGCCAGA-AAGAG-CTGGGGTCTTCTTCAATCGTGATCTCAATTAATGAATGCCCTC--ACCTCCTAGCCCTTCAACCATCTCCACTCAC-CAGCGGCTGTCTC-CATCAACATCACCCTTCAGCAGGCAGCTCCAT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3637829 226 - 180051392 GAATAAACAAAAGTGAGTGACTGATTGGGATGGCGGGGTGG-GCAATGGGGAAGGGATATATAGGTAGACTC-TAAATCAGAAG-CCTTACTGAAATCAGCCAGA-AAGAG-CTGGGATCTTCTTCAACTGTGATCTCAGTTAATGAAGGCCCTC--ACGTCCGAGCCCTTCAATCATCTCCACTCAC-CAGCAACTGTCTC-CATCAATATCACCCTTCAGCAGGCAGCTCCAC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3826907 226 - 181584905 GAATAAACAAAAGTGAGTGACTGATTGGGATGGCGGGGTGG-GCAATGGGGAAGGGATATATAGGTAGACTC-TAAATCAGAAG-CCTTACTGAAATCAGCCAGA-AAGAG-CTGGGATCTTCTTCAACTGTGATCTCAGTTAATGAAGGCCCTC--ACGTCCGAGCCCTTCAATCATCTCCACTCAC-CAGCAACTGTCTC-CATCAATATCACCCTTCAGCAGGCAGCTCCAC i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3847928 226 + 4899514 GAATAAACAAAAGTGAGTGACTGATTGGGATGGCGGGGTGG-GCAATGGGGAAGGGATATATAGGTAGACTC-TAAATCAGAAG-CCTTACTGAAATCAGCCAGA-AAGAG-CTGGGATCTTCTTCAACTGTGATCTCAGTTAATGAAGGCCCTC--ACGTCCGAGCCCTTCAGTCATCTCCACTCAC-CAGCAACTGTCTC-CATCAATATCACCCTTCAGCAGGCAGCTCCAC i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012001120v1 3570610 226 - 3647740 GAATAAACAAAAGTGAGTGACTGATTGGGATGGCGGGGTGG-GCAGTGGGGAAGGGATGTATAGGTAGACTC-TAAATCAGAAG-CCTTACTGAAATCAGCCAGA-AAGAG-CTGGGATCTTCTTCAGCTGTGATCTCAGTTAATGAAGGCCCTC--ACGTCGGAGCCCTTCAATCATCTCCACTCAC-CAGCAACTGTCTC-CATCAATATCACCCTTCAGCAGGCAGCTCCAC i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79704834 226 + 82825804 GAATAAACAAAAGTGAGTGACTGATTGGGATGGCGGGGTGG-GCAATGGGGAAGGGATGTATAGGTAGACTC-TAAATCAGAAG-CCTTACTGAAATCAGCCAGA-AAGAG-CTGGGATCTTCTTCAATCGTGATCTCAGTTAATGAAGGCCCTC--ATGTCTGAGACCTTCAATCATCTCCACTCAC-CAGCAACCGTCTC-CATCAATATCACCCTTCAGCAGGCAGCTCCAC i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1672188 226 - 1768974 GAATAAACAAAAGTGAGTGACTGATTGGGATGGCGGGGTGG-GCAGTGGGGAAGGGATGTATAGGTAGACTC-TAAATCAGAAG-CCTTACTGAAATCAGCCAGA-AAGAG-CTGGGATCTTCTTCAATCGTGATCTCAGTTAATGAAGGCCCTC--ACGTCTGAGCCCTTCAATCATCTCCACTCAC-CAGCAACTGTCTC-CATCAATATCACCCTTCAGCAGGCAGCTCCAC i manLeu1.NW_012103876v1 C 0 C 0 s colAng1.NW_012117422v1 151782 226 - 815015 GAATAAACAAAAGTGAGTGACTAATTGGGATGGCGGGGTGG-GCAGTGGGGAAGGGATGTATAGGTAGACTC-TAAATCAGAAG-CCTTACTGAAATCAGGCAGA-AAGAG-CTGGGATGTTCTTCAATCGTGATCTCAGTTAATGAAGGCCCTC--ACGTCCGAGCCCTTCAGTCATCTCCGCTCAC-CAGCAACTGTCTC-CATCAATGTCACCCTTCAGCAGGCAGCTCCAC i colAng1.NW_012117422v1 C 0 C 0 s calJac3.chr2 140364409 223 - 204313951 GAATAAACAAAAGTGAGTGACTGATTGGGATGGC-GGGTGG-GCGATGGGGAAGGGATGTATAGGTAGACTC-TAAGTCAAAAG-CCTTACTGAAATCAGCCAGA-AAGAG-CT-GGATGTTCTTCAGTCATGATCTCAATTAATGAAGGCCC-A--ACATCCTAGCCCTTCAATCATCTCCACTCCC-CAGAAACTGTCTC-CGTCAGTATCACCCTTCACCAGGCAGCTCCAT i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 32654 224 + 10068113 GAATAAACAAAAGTGAGTCGCTGATTGGGATGGC-CGGTGG-GCGATGGGGAAGGGATATATAGGTAGACTC-TAAGTCAAAAG-CCTTACTGAAATCAGCCAGA-AAGAG-CTGGGATGTTCTTCAATCATGATCTCAATTAATGAAGGCCC-C--ACATTCTAGCCCTTCAATCATCTCCACTCAC-CAGCAACTGTCTC-CATCAATATCACCCTTCACCAGGCAGCTCCAC i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016108322v1 92380 224 + 99478 GAATAAACAAAAGTGAGTGAGTGTTTGTGATGGC-GGGTGG-GCAACGGGGAAGGGATGTATAGGTAGACTC-TAAGTCAAAAG-CCTTACTGAAATCAGCCAGA-AAGAG-CTGGGATGTTCTTCAATCATGATCTCAGTTAATGAAGGCCC-A--ACATCCTAGCCCTTCAGTCATCTCTACTCAC-CAGCAACTGTCTC-CGTCAATATCACCCTTCACCAGGCAGCTCCAT i cebCap1.NW_016108322v1 C 0 C 0 e aotNan1.NW_018505037v1 2592940 1211 + 3417841 I a score=20559.000000 s hg38.chr5_KI270795v1_alt 130965 4 + 131892 CGAG s gorGor5.CYUI01000356v1 108120 4 + 152767 CGAG i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160370419 4 - 163208435 GGAG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3638055 4 - 180051392 GGGG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3827133 4 - 181584905 GGGG i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3848154 4 + 4899514 GGGG i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012001120v1 3570836 4 - 3647740 GGGG i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79705060 4 + 82825804 GGAG i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1672414 4 - 1768974 GGGG i manLeu1.NW_012103876v1 C 0 C 0 s colAng1.NW_012117422v1 152008 4 - 815015 GGGG i colAng1.NW_012117422v1 C 0 C 0 s calJac3.chr2 140364632 4 - 204313951 GGAG i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 32878 4 + 10068113 GGAG i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016108322v1 92604 4 + 99478 GGAG i cebCap1.NW_016108322v1 C 0 C 0 e aotNan1.NW_018505037v1 2592940 1211 + 3417841 I e panTro5.chr5 3445586 6 - 181907262 I a score=799834.000000 s hg38.chr5_KI270795v1_alt 130969 115 + 131892 GCATCTTGCCCTGTCTCTTCC---AGTAGCTCA-CCTC-CCCAGACTTCCTCCACTAATCAC--CCCAGTGAGAATTCACCATGA--TCTCCCATTTTTAAATTTCTAATCG--CTGAG-CTGACCC s panTro5.chr5 3445592 126 - 181907262 GCATCTGTCTATGTCTCTTCCGGAAGTAGCTCAGCCTCGCCCAGACTTCCTCCA-TAATCAGCACCCAGTGAGAATTCACCATGAATTCTCCATTTTTCACATTTCTAATCATCCTGAGTCTGACCC i panTro5.chr5 I 6 I 8 s gorGor5.CYUI01000356v1 108124 115 + 152767 GCATCTTGCCCTGTCTCTTCC---AGTAGCTCA-CCTC-CCCAGACTTCCTCCACTAATCAC--CCCAGTGAGAATTCACCATGA--TCTCCCATTTTTAAATTTCTAATCG--CTGAG-CTGACCC i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160370423 115 - 163208435 GCATCTCTCCCTGTCTCTTCC---AGTAGCTCA-CCTC-CCCAGATTTCCTCCACTAATCAC--TACAGTGAGAATTCACCATGA--TCTCCCATTTTTAAATTTCTAATCG--CTGAG-CTGACCC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3638059 115 - 180051392 GCCTCTTTGCCTGTCTCTTCC---AGCAGCTCA-CCTC-CCCAGATTTCCTCCACTCATCAC--CACAGTGAGAATTCACCATGA--TCTCCCACTTTTAAATTTCCAATTG--CTGAG-CCGACCC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3827137 115 - 181584905 GCCTCTTTGCCCGTCTCTTCT---AGCAGCTCA-CCTC-CCCGGATTTCCTCCACTCATCAC--CACAGTGAGAATTCACCATGA--TCTCCCACTTTTACATTTCCAATTG--CTGAG-CCGACCC i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3848158 115 + 4899514 GCCTCTTTGCCTGTCTCTTCC---AGCAGCTCA-CCTC-CCCAGATTTCCTCCACTCATCAC--CACAGTGAGAATTCACCATGA--TCTCCCACTTTTAAATTTCCAATTG--CTGAG-CCGACCC i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012001120v1 3570840 115 - 3647740 GCCTCTTTGCCTGTCTGTTCC---AGCAGCTCA-CCTC-CCCAGATTTCCTCCACTCATCAC--CACAGTGAGAATTCACCACGA--TCTCCTACTTTTAAATTTCCAATTG--CTGAG-CCGACCC i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79705064 115 + 82825804 GCCTCTTTGCCTGTCTCTTCC---AGCAGCTCA-CCTC-CCCAGATTTCCTCCACTCATCAC--CACAGTAAGAATTCACCACGA--TCTCCCACTTTTAAATTTCCAATTG--CTGAG-CCGACCC i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1672418 115 - 1768974 GCCTCTTTGCCTGTCTCTTCC---AGCAGCTCA-CCTC-CCCAGATTTCCTCCACTCATCAC--CACAGTGAGAATTCACCACGA--TCTCCCACTTTTAAATTTCCAATTG--CTGAG-CCGACCC i manLeu1.NW_012103876v1 C 0 C 0 s colAng1.NW_012117422v1 152012 115 - 815015 GCCTCTCTGCCTGTCTCTTCC---AGCAGCTCA-CCTC-CCCAGATTTCCTCCACTCATCAC--CACAGTGAGAATTCACCATGA--TCTCCCATTTTTAAATTTCCAATTG--CTGAG-CTGACCC i colAng1.NW_012117422v1 C 0 C 0 s calJac3.chr2 140364636 115 - 204313951 ACATCTTTCCCTGCCTCTTCC---AGTAGCTCA-CCTC-CCCAGATTTCCCCCATTAATCAC--TGCAGTAAGAATTCACCACGA--TCTCCCATTTTTAAATTCCCAATCG--TTGAG-CTGACCC i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 32882 115 + 10068113 AAATCTTTCCCTGCCTCTTCC---AGTAGCTCA-CCTC-CCCAGATTTCCTCCATTAATCAC--TGCAGTGAGAATTCACCATGA--TCTCCCGTTTTTAAATTTCCAATTG--CTGAG-CTGACCC i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016108322v1 92608 115 + 99478 ACATCTTTCCCTGCCTCTTCC---AGTAGCTCA-CCTC-CCCAGATTTCCTCCATTAATCAC--TGCAGTGAGAATTCACCATGA--TCTCCCATTTTTAAATTTCCAATTG--CTGAG-CTGACCC i cebCap1.NW_016108322v1 C 0 C 0 e aotNan1.NW_018505037v1 2592940 1211 + 3417841 I a score=62125.000000 s hg38.chr5_KI270795v1_alt 131084 10 + 131892 TCACCATGCA s gorGor5.CYUI01000356v1 108239 10 + 152767 TCACCATGCA i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160370538 10 - 163208435 TCACCATACA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3638174 10 - 180051392 TCACCATACT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3827252 10 - 181584905 TCACCATACT i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3848273 10 + 4899514 TCACCATACT i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012001120v1 3570955 10 - 3647740 TCACCATACT i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79705179 10 + 82825804 TCACCATACT i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1672533 10 - 1768974 TCACCATACT i manLeu1.NW_012103876v1 C 0 C 0 s colAng1.NW_012117422v1 152127 10 - 815015 TCACCATACT i colAng1.NW_012117422v1 C 0 C 0 s calJac3.chr2 140364751 10 - 204313951 TCACCATACA i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 32997 10 + 10068113 TCACCATACA i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016108322v1 92723 10 + 99478 TCACCATACA i cebCap1.NW_016108322v1 C 0 C 0 e aotNan1.NW_018505037v1 2592940 1211 + 3417841 I e panTro5.chr5 3445718 8 - 181907262 I a score=1900854.000000 s hg38.chr5_KI270795v1_alt 131094 260 + 131892 TCTGCTTCAC---CCATAGATGGAAAGG-AAGC-CACCCCATTTTCTTG---TCTTT-TCAC-GAGGGCCGCAGGCTGGGGATCACCTTGGTGGTA-CTTGTTTGACCTCAGTTCCAGGACTTGGATGGCTC-AAGGCTGAGGGGGAGCATGGGAGGGGGTGGGGGGCAGGGCAGATGGCCGGCAGGGGCTGGGTGCAAGGTAGGGTACCAGTCC-TCAGACT-GGTGTGACAAAGCAAAGGCGCCTCCTGTGGAGGGCTGGGAAGGGAGGGCA s panTro5.chr5 3445726 250 - 181907262 TCTGCTTCAC---CC-TGAATGGAAAGGCAAGCGCAACCCATTTCGTTG---TTTTTCTCACAGAGGGCCACA-GCT-GGGATCA-CTTGGTTGTAGCTTGTTTGACCTCAGTTCCAGGACTT-GATGCCTCAAAGGCTG-GGGGGAGCATGGGAGGG---GTGGGGCA-GGCAGAT-GCCGGCAGGG---TGGTGCAAGGTA-GGTACCAGTCCTTCAGACTGGGTGTGACAAAGCAAAGGCGCCTCCTGTGGAGGGCTG---AGGGAGGCGC i panTro5.chr5 I 8 C 0 s gorGor5.CYUI01000356v1 108249 259 + 152767 TCTGCTTCAC---CCATAGATGGAAAGG-AAGC-CACCCCATTTTCTTG---TTTTT-TCAC-GAGGGCCGCAGGCTGGGGATCACCTTGGTGGTA-CTTGTTTGACCTCAGTTCCAGGACTTGGATGGCTC-AAGGCTGAGGGGGAGCATGGGAGGGGGTG-GGGGCAGGGCAGATGGCCAGCAGGGGCTGGGTGCAAGGTAGGGTACCAGTCC-TCAGACT-GGTGTGACAAAGCAAAGGCGCCTCCTGTGGAGGGCTGGGAAGGGAGGGCG i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160370548 260 - 163208435 TCTGCTTCAC---CCATAGATGGAAAGG-AAGC-CACCCCATTTTCTTG---TTTTT-TCAT-GAGGGCCACAGGCTGGGGATCACCTTGGTGGTA-CTTGTTTGACCTCAGTTCCAGGACTTGGATGGCTC-AAGGCTGAGGGGGAGCATGGCAGGGGGTGGGGGGCAGGGCAGATGGCTGGCAGGGGCTGGGTGCAAGGTAGGGTACCAGTCC-TCAGACT-GGTGTGGCAAAGCAAAGGCGCCTCCTGTGGAGGGCTGGGAGGGGAGGGCA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3638184 260 - 180051392 TCTGCTTCGC---CCATAGAAGGAAAGG-AAGC-CACCCCAATTTCTTG---TTTTG-TCAC-GAGGGCCACAGGCTGGGGATCACCTTAGTGGTA-CTTGTTTCACCTCAGTTCCAGGACTTGGATGGCTC-AAGGCTGAGGGGGAGCATGGGAGGGGGTGGGGGGCAGGGCAGATGGCCAGCAGGGGTTGGGTGCAAGGCAGGGTACCAGTCC-TCAGACT-GGTGTGGCAAAGCAAAGGCGCCTCCTGTGGAGGGCTGGGAGGGGAGGGCG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3827262 260 - 181584905 TCTGCTTCGC---CCATAGAAGGAAAGG-AAGC-CACCCCAATTCCTTG---TTTTG-TCAC-GAGGGCCACAGGCTGGGGATCACCTTAGTGGTA-CTTGTTTCACCTCAGTTCCAGGACTTGGATGGCTC-AAGGCTGAGGGGGAGCATGGGAGGGGGTGGGGGGCAGGGCAGATGGCCAGCAGGGGTTGGGTGCAAGGCAGGGTACCAGTCC-TCAGACT-GGTGTGGCAAAGCAAAGGCGCCTCCTGTGGAGGGCTGGGAGGGGAGGGCG i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3848283 260 + 4899514 TCTGCTTCGC---CCATAGAAGGAAAGG-AAGC-CACCCCAATTTCTTG---TTTTG-TCAC-GAGGGCCACAGGCTGGGGATCACCTTAGTGGTA-CTTGTTTCACCTCAGTTCCAGGACTTGGATGGCTC-AAGGCTGAGGGGGAGCATGGGAGGGGGTGGGGGGCAGGGCAGATGGCCAGCAGGGGTTGGGTGCAAGGCAGGGTACCAGTCC-TCAGACT-GGTGTGGCAAAGCAAAGGCGCCTCCTGTGGAGGGCTGGGAGGGGAGGGCG i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012001120v1 3570965 260 - 3647740 TCTGCTTCGC---CCATAGAAGGAAAGG-AAGC-CACCCCAATTTCTTG---TTTTG-TCAT-GAGGGCCACAGGCTGGGGATCACCTTAGTGGTA-CTTGTTTGACCTCAGTTCCAGGACTTGGATGGCTC-AAGGCTGAGGGGGAGCATGGGAGGGGGTGGGGGGCAGGGCAGATGGCCAGCAGGGGTTGGGTGCAAGGCGGGGTACCAGTCC-TCAGACT-GGTGTGGCAAAGCAAAGGCGCCTCCTGTGGAGGGCTGGGAGGGGAGGGCG i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79705189 260 + 82825804 TCTGCTTCAC---CCATAGAAGGAAAGG-AAGC-CACCCCAATTTCTTG---TTTTG-TCAC-GAGGGCCACAGGCTGGTGGTCACCTTAGTGGTA-CTTGTTTGACCTCAGTTCCAGGACTTGGATGGCTC-AAGGCTGAGGGGGAGCATGGGAGGGGGTGGGGGGCAAGGCAGATGGCCAGCAGGGGTTGGGTGCAAGGCAGGGTACCAGTCC-TCAGACT-GGTGTGGCAAAGCAAAGGTGCCTCCTGTGGAGGGCTGGGAGGGGAGGGCG i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1672543 260 - 1768974 TCTGCTTCGC---CCATAGAAGGAAAGG-AAGC-CACCCCAATTTCTTG---TTTTG-TCAC-GAGGGCCACAGGCTGGGGATCACCTTAGTGGTA-CTTGTTTGACCTCAGTTCCAGGACTTGGATGGCTC-AAGGCTGAGGGGGAGCATGGGAGGGGGTGGGGGGCAGGGCAGATGGCCAGCAGGGGTTGGGTGCAAGGTGGGGTACCAGTCC-TCAGACT-GGTGTGGCAAAGCAAAAGCACCTCCTGTGGAGGGCTGGGAGGGGAGGGCG i manLeu1.NW_012103876v1 C 0 C 0 s colAng1.NW_012117422v1 152137 260 - 815015 TCTGCTTTGC---CCATAGAAGGAAAGG-AAGC-CACCCCATTTTCTTG---TTTTG-TCAT-GAGGGCCACAGGCTGGGGATCACCTTGGTGGTA-CTTGTTTCACCTCAGTTCCAGGACTTGGATGGCTC-AAGGCTGAGGGGGAGCATGGGAGGAGGTGGGGGGCAAGGCAGATGGCCAGCAGGGGTCGGGTGCAAGGTGGAGTACCACTCC-TCAGACT-GGTGTGGTAAAGCAAAGGCGCCTCCTGTGGAGGGCTGAGAGGGGAGGGCG i colAng1.NW_012117422v1 C 0 C 0 s calJac3.chr2 140364761 262 - 204313951 TCTGCTTCATGAACCACAGAAGAAAAGG-AAGC-CACCCCATTTCCTTG---TTTTT-TCAC-GAGAGTCACAGGCTGGGGATCACCTTAGCAGTG-CTTGTTTGTCCTTAGTTCCAGGACTTGGATGGCTC-AAGGCTGA-GGGGAGCATGGGAGGGGGCGGGGGGCAGGGCAGATGGCCGGAAGGGGTTGGGTTCAAGGTAGGGTACCAGTCC-TCAGACT-GGTGTGGCAGAGCAAAGGTGCCTCCTGTGGAGGGCTGGGAGGGGAAGGCG i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 33007 263 + 10068113 TCTGCTTCAC---CCATAGAAGAAAAGG-AAGC-CACCCCATTTTCTTGTTTTTTTT-TCAC-GAGAGCCACAGGCTGGGGATCACGTTAGTGGTG-CTTGTTTGACCTTAGTTCCAGGACTTGGATGGCTC-AAGGCTGAGGGGGAGCATGGGAGGGGGCGGGGGGCAGGGCAGATGGCCGGCAGGGGTTGGGTTCAAGGTAGGGTACCAGTCC-TCAGACT-GGTGTGGCAGAGCAAAGGTGCCTCCTGTGGAGGGCTGGGAGGGGAAGGCG i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016108322v1 92733 260 + 99478 TCTGCTTCAC---CCATAGAAGAAAAGG-AAGC-CACCCCATTTTCTTG---GTTTT-TCAC-GAGAGCCACAGGCTGGGGATCACCTTAGTGGTG-CTTGTTTGACCTTAGTTCCAGGACTTGGATAGCTC-AAGGCTGAGGGGGAGCATGGGAGGGGGTGGGGGGCAGGGTGGATGGCCAGCAGGGGTTGGGTTCAAGGTAGGGTACCAGTCC-TCAGACT-GGTGTGGCAGAGCAAAGGTGCCTCCTGTGGAGGGCTGGGAGGGGAAGTCG i cebCap1.NW_016108322v1 C 0 C 0 e aotNan1.NW_018505037v1 2592940 1211 + 3417841 I a score=2794235.000000 s hg38.chr5_KI270795v1_alt 131354 339 + 131892 TGG-CTGTAGGGGTGAGGGAAGCA-GGTCACTGGTGGTGGTGGTGCTGCGTAAGAATAGGGGCAAGCAGTGGACTCTGG-CAAGAAGCTGG-AAAAGGCGGCAGGAGACAGATGGGCCAGAGGCTGAAGCAGTGAGCGCTCTTG-CTTCCGTTGCTTAGCTCTGCGGTTCTGGAACCAGACCTGAGAAGGGGTAGGAACCACATCAGAGCCCACACTTGACATAGGTGG--TGACA----CCCTAC-TCCAATGACAAGAGGTGCAGGGACAGGGAGCAGGCTTCTCCAGCATGGCCAGAGG-GAGTAAAGCTCTTCCACAAGGCTTGGCTGAG--CCTGGTCTGCTGACAAAG s panTro5.chr5 3445976 335 - 181907262 TGGCCTGTAGGGTGGAGGGAAGCACGGTCACT-GTGGTGG-GGTGGTGCATAAGAATAGGGGCAAGCAGC-GACTCTGGCCAAGATGCTGGAAAAAGGCGGCAGGAG-CAGAT-GGCCA-AAGCTGAAGCAGTGA-CGCTCTGGCCTTCCGTTGC-TAGCTCTGCGGTTCT-GAACCAGACCTGAGAAGGGTGAGG-ACCACATCAGAGCCCACACTTGACATAGGTGGGATGACA----CCCTACATCAAATGACAAGAGGT-CTGGGAC-GGGAGCAGCTTCTTCCAGCAT-GCCAGAGGAGAGTAAAGCTC-TCCACAA-GCTTGGCGGAGCTCCTGGTCTGCTGACAAAG i panTro5.chr5 C 0 N 0 s gorGor5.CYUI01000356v1 108508 336 + 152767 TGG-CTGTAGGGGTGAGGAAAGCA-GGTCACT---GGTGGTGGTGGTGCGTAAGAATAGGGGCAAGCAGTGGACTCTGG-CAAGAAGCTGG-AAAAGGCGGCAGGAGACAGATGGGCCAGGGGCTGAAGCAGTGAGCGCTCTTG-CTTCCGTTGCTTAGCTCTGCGGTTCTGGAACCAGACCTGAGAAGGGGTAGGAAACACATCAGAGCCCACACTTGACATAGGTGG--TGACA----CCCTAC-TCCAATGACAAGAGGTGCAGGGACAGGGAGCAGGCTTCTCCAGCATGGCCAGAGG-GAGTAAAGCTCTTCCACAAGGCTTGGCTGAG--CCTGGTCTGCTGACAAAG i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160370808 336 - 163208435 TGG-CTGTAGGGGTGAGGGAAGCA-GGTCACT---GGTGGTGGTGGTGCGTAGGAATAGGGGCAAGCAGTGGACTCTGA-CAAGAAGCTGG-AAAAGGCAGCAGGAGACAGATGGGCCAGGGGCTGAAGCAGTGAGCGCTCTTC-CTTCCGTTGCTTAGCTCTGCGGTTCTGGAACCAGACCTGAGAAGGGGGAGGAAACACATCAGAGCCCACACTTGACATAGGTGG--TGACA----CCCTAC-TCCAGTGACAAGAGGTGCAGGGACAGGGAGCAGGCTTCTCCAGCATGGCCAGAGG-GAGTCAAGCCCTTCCACAAGGCTTGGCTGAG--CCTGGTCTGCTGACAGAG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3638444 338 - 180051392 TGG-CTGTAGGGGTGAGGGAAGCA-GGTCACTGGTGGCGGTGGTGGCGCGTAGGAGTAGGGGCAAGCAGGGGACTCTGG-CAAGAAGCTGG-AAAAGGCGGCAGGAGACAGATGGGCCAGGGGCTGAAGCAGTGAGCGCTCTTG-CTTCCGTTGCTTAGCTCTGCGGTTCTGGAACCAGACCTGAGAAGGGGGAGCAAACACATCAGAGCCCACACCTGACATTGGTGC--TGACA----CCCTAC-TCCAATGACAAGAGGTGCAGGGACAGGGAGCAGGCCTCTCCAGCATGGCCAGAGG-AAGTAAAGCCCTTCCACAAGG-TTGGCTGAG--CCTGGTCTGCTGCCAAAG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3827522 338 - 181584905 TGG-CTGTAGGGGTGAGGGAAGCA-GGTCACTGGTGGCGGTGGTGGCGCGTAGGAGTAGGGGCAAGCAGGGGACTCTGG-CAAGAAGCTGG-AAAAGGCGGCAGGAGACAGATGGGCCAGGGGCTGAAGCAGTGAGCGCTCTTG-CTTCCGTTGCTTAGCTCTGCGGTTCTGGAACCAGACCTGAGAAGGGGGAGCAAACACATCAGAGCCCACACCTGACATTGGTGC--TGACA----CCCTAC-TCCAACGACAAGAGGTGCAGGGACAGGGAGCAGGCCTCTCCAGCATGGCCAGAGG-AAGTAAAGCCCTTCCACAAGG-TTGGCTGAG--CCTGGTCTGCTGCCAAAG i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3848543 338 + 4899514 TGG-CTGTAGGGGTGAGGGAAGCA-GGTCACTGGTGGCGGTGGTGGCGCGTAGGAGTAGGGGCAAGCAGGGGACTCTGG-CAAGAAGCTGG-AAAAGGCGGCAGGAGACAGATGGGCCAGGGGCTGAAGCAGTGAGCGCTCTTG-CTTCCGTTGCTTAGCTCTGCGGTTCTGGAACCAGACCTGAGAAGGGGGAGCAAACACATCAGAGCCCACACCTGACATTGGTGC--TGACA----CCCTAC-TCCAACGACAAGAGGTGCAGGGACAGGGAGCAGGCCTCTCCAGCATGGCCAGAGG-AAGTAAAGCCCTTCCACAAGG-TTGGCTGAG--CCTGGTCTGCTGCCAAAG i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012001120v1 3571225 338 - 3647740 TGG-CTGTAGGGGTGAGGGAAGCA-GGTCACTGGTGGCGGTGGTGGCGCGTAGGAGTAGGGGCAAGCAGGGGACTCTGG-CAAGAAGCTGG-AAAAGGCGGCAGGAGACAGATGGGCCAGGGGCTGAAGCAGTGAGCGCTCTTG-CTTCCGTTGCTTAGCTCTGCGGTTCTGGAACCAGACCTGAGAAGGGGGAGCAAACACATCAGAGCCCACACCTGACATTGGTGC--TGACA----CCCTAC-TCCAACGACAAGAGGTGCAGGGACAGGGAGCAGGCCTCTCCAGCATGGCCAGAGG-AAGTAAAGCCCTTCCACAACG-TTGGCTGAG--CCTGGTCTGCTGCCAAAG i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79705449 338 + 82825804 TGG-CTGTAGGGGTGAGGGAAGCA-GGTCACTGGTGGTGGTGGTGGCACGTAGGAGTAGGGGCAAGCAGGGGACTCTGG-CAAGAAGCTGG-AAAAGGCGGCAGGAGACAGATGGGCCAGGGGCTGAAGCAGTGAGCGCTCTTG-CTTCCGTTGCTTAGCTCTGCGGTTCTGGAACCAGACCTGAGAAGGGGGAGCAAACACATCAGAGCCCACACCTGACACTGGTGC--TGACA----CCCTAC-TCCAACGACAAGAGGTGCAGGGACAGGGAGCAGGCCTCTCCAGCATGGCCAGAGG-AAGTAAAGCCCTTCCACAAGG-TTGGCTGAG--CCTGGTCTGCTGACAAAG i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1672803 338 - 1768974 TGG-CTGTAGGGGTGAGGGAAGCA-GGTCACTGGTGGTGGTGGTGGCGCGTAGGAGTAGGGGCAAGCAGGGGACTCTGG-CAAGAAGCTGG-AAAAGGTGGCAGGAGACAGATGGGCCAGGGGCTGAAGCAGTGAGCGCTCTTG-CTTCCGTTGCTTAGCTCTGCGGTTCTGGAACCAGACCTGAGAAGGGGGAGCAAACACATCAGAGCCCACACCTGACATTGGTGC--TGACA----CCCTAC-TCCAACGACAAGAGGTGCAGGGACAGGGAGCAGGTCTCTCCAGCATGGCCAGAGG-AAGTAAAGCCCTTCCACAAGG-TTGGCTGAG--CCTGGTCTGCTGCCAAAG i manLeu1.NW_012103876v1 C 0 C 0 s colAng1.NW_012117422v1 152397 339 - 815015 TGG-CTGTAGGGGTGAGGGAAGCA-GGTCACTGGTGGCGGTGGTGGTGCGTAGGAGTAGGGGCAAGCAGGGGACTCTGG-CAAGAAGCTGG-AAAAGGCAGCAGGAGACAGATGGGCCAGGGGCTGAAGCAGTGAGCGCTCTTG-CTTCCGTTGCTTAGCTCTGCGGTTCTGGAACCAGACCTGAGAAGGGGGAGCACACATATCAGAGCCCACACATGACATTCGTGC--TGACA----CCCTAC-TCCAATGACAAGAGGTGCAGGGACAGGGAGCAGGCCTCTCCAGCATGGCCAGTGG-AAGTAAAGCCCTTTCACACGGCTTGGCTGAG--CCTGGTCTGCTGACAAAG i colAng1.NW_012117422v1 C 0 C 0 s calJac3.chr2 140365023 343 - 204313951 TGG-CTGTAGGGGTGAGGGAAGCA-GGTCACTGGTGGAGGTGGCGTTGTATAGGAGTAGGGGCCAGCAGGGGACTCTGG-CAAGAAGCCAG-AGAAGGTGGCAGGAGACAGATGGGCCAGGGGCTGGAGCAGTGAACGCTCTTG-CTTCCGTTGCTTAGCTCTGCGGTTCTGGAACCAGACCTGAAAAGGGCGAGCAAACACATCAGAGCCTATGCCTCAAACAGGTGG--TGACAGACACCCTGC-TCCAATGACAAGAGGTGCAGGGACAGGGAGCAGGCCTCTCCAGCATGGCCAGAGG-CAGTAAAGCCCTTCCACAAGGCCTGGCTGAG--CCCGGTCTGCTGATTCAG i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 33270 343 + 10068113 TGG-CTGTAGGGGTGAGGGAAGCA-GGTCACTGGTGGAGGTGGCGTTGTGTAGGAGTAGGGGCCAGCAGGGGACTCTGG-CAAGAAGCCAG-AGAACGTGGCAGGAGACAGATGGGCCAGGGGCTGGAGCAGTGAACGCTCTTG-CTTCCGCTGCTTAGCTCTGCGATTCTGGAACCAGACCTGAAAGGGGTGAGCAAACACATCAGAGCCCATGACTCAAACAGGTGG--TGACAGACACCCGGC-TCCAATGACTAGAGGTGCAGGGACAGGGAGCAGGCCTCTCCAGCATGGCCAGAGG-AAGTAAAGCCCTTCCACAAGGCCTGGCTGAG--CCCGGTCTGCTGATTCAG i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016108322v1 92993 343 + 99478 TGG-CTGTAGGGGTGAGGGAAGCA-GGTCACTGGTGGAGGTGCCGTTGTGTAGGAGTAGGGGCCAGCAGGGGACTCCGG-CAAGAAGCCGG-AGAAGGTGGCAGGAGACAGATGGGCCAGGGGCTGCAGCAGTGAGCGCTCTTG-CTTCCGTTGCTTAGCTCTGCGGTTCTGGAACCAGACCTGAAAGGGGCGAGCAAACACATCAGAGCCCACGCCTCAAACAGGTGG--TGACAGACTCCCTGC-TCCAATGACAAGAGGTGCAGGGACAGGGAGCAGGCCTCTCCAGGATGGCCAGAGG-AAGCAAAGCCCTTCCACAAGACCTGGCTGAG--CCCGGTCTGCTGATTCAG i cebCap1.NW_016108322v1 C 0 C 0 s aotNan1.NW_018505037v1 2594151 343 + 3417841 TGG-CTGTAGGGGTGAGGGAAGCA-GGTCACTGGTGGAGGTGGCGTTGTGTAGGAGTAGGGGCCAGCAGGGGACTCTGg-caggaagctgg-agaaggtggcaggagacagatgggccaggggctggagcagtgagcGCTCTTG-CTTCCGCTGCTTAGCTCTGCGGTTCTGGAACCAGACCTGAAAGGGGCGAGCAAACACATCAGAGCCCACGCCTCAAGCAGGTGG--TGACAGACACCCTGC-TCCAATGACAAGAGGTGCAGGGACGGGGAGCAGGCCTCTTCAGCATGGCCAGAGG-AAGTAAAGCCCTTCCACAAGGCCTGGCTGAG--CCTGGTCTGCTGATTCAG i aotNan1.NW_018505037v1 I 1211 C 0 a score=157045.000000 s hg38.chr5_KI270795v1_alt 131693 19 + 131892 GAACCCACAGACTTGTCCC s gorGor5.CYUI01000356v1 108844 19 + 152767 GAACCCACAGACTTGTCCC i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160371144 19 - 163208435 GAACCCACAGTCTTATCCC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3638782 19 - 180051392 GAACCCACAGACTTGTCCC i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3827860 19 - 181584905 GAACCCACAGACTTATCCC i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3848881 19 + 4899514 GAACCCACAGACTTATCCC i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012001120v1 3571563 19 - 3647740 GAACCCACAGACTTATTCC i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79705787 19 + 82825804 GAACCCACAGACTTATCCC i chlSab2.chr23 C 0 C 0 s manLeu1.NW_012103876v1 1673141 19 - 1768974 GAACCCACAGACTTATCCC i manLeu1.NW_012103876v1 C 0 N 0 s colAng1.NW_012117422v1 152736 19 - 815015 GAACCCACAGACTTATCCC i colAng1.NW_012117422v1 C 0 C 0 s calJac3.chr2 140365366 19 - 204313951 GAACCCACAGACTTATCCC i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 33613 19 + 10068113 GAACCCACAGACTTATCCC i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016108322v1 93336 19 + 99478 GAACCCACAGACTTATCCC i cebCap1.NW_016108322v1 C 0 C 0 s aotNan1.NW_018505037v1 2594494 19 + 3417841 GAACCCACAGACTTATCCC i aotNan1.NW_018505037v1 C 0 C 0 a score=969304.000000 s hg38.chr5_KI270795v1_alt 131712 165 + 131892 CAGCCTCTGTCCACATGTGCCCTTTTCTAACACTCGGGGCAAGTAAGAAGTGTCAGCTTCCACCAAGGAGATAAATATGGTGACAATGACATTTCCCTTCCCCAGAGAATGGGAAATTTCCCCTAGGGTTAAGTTTAACGATTAAGACTGTAGATAAATGTAATT s gorGor5.CYUI01000356v1 108863 165 + 152767 CAACCTCTGTCCACATGTGCCCTTTTCTACCACTCGGGGCAAGTAAGAAGTGTCAGCTTCCAACAAGGAGATAAATATGGTGACAATGACATTTCCCTTCCCCAGAGAATGGGAAATTTCCCCTAGGGTTAAGTTTAACGATTAAGACTGTAGATAAATGTAATT i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160371163 163 - 163208435 CAATCTGTGTCCACATGTGCCC-TTTCCACCACTCAGGGCAAGTAAGAAATGTCAACTTCCAACAAGGAGATAAATATGGCGACAATGACATTTCCCTTCCCCAGAGAATGGGAAATTTCCCCTCGGGTTAAGTTTAACGA-CAAGACTCTAGATAAATGTAATT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3638801 165 - 180051392 CAACCTGCATCCACACGTGCTCTTTTCTACCACTCTGGGCGAATAAGAAATGTCAACTTCCAACAAGGAGACAAATATGGTGACAGTGACATTTCCCTTCCCCAGAGAATGGGAAATTTCTCCTACGGTTAAGTTTAACAATGAAGACTGTAGATAAATGTAATT i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3827879 165 - 181584905 CAACCTGCATCCACACGTGCTCTTTTCTACCACTCTGGGCGAATAAGAAATGTCAACTTCCAACAAGGAGATAAATATGGTGACAGTGACATTTCCCTTCCCCAGAGAATGGGAAATTTCCCCTACGGTTAAGTTTAACAATGAAGACTGTAGATAAATGTAATT i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3848900 165 + 4899514 CAACCTGCATCCACACGTGCTCTTTTCTACCACTCTGGGCAAATAAGAAATGTCAACTTCCAACAAGGAGATAAATATGGTGACAGTGACATTTCCCTTCCCCAGAGAATGGGAAATTTCCCCTACGGTTAAGTTTAACAATGAAGACTGTAGATAAATGTAATT i macNem1.NW_012020287v1 C 0 C 0 s cerAty1.NW_012001120v1 3571582 165 - 3647740 CAACCTGCATCCACCTGTGCCCTTTTCCGCCACTCTGGGCGAATAAGAAATGTCAACTTCCAACAAGGAGATAAATATGGTGACAGTGACATTTCCCTTCCCCAGAGAATGGGAAATTTCCCCTACAGTTAAGTTTAACAATGAAGACTGTAGATAAATGTAATT i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79705806 165 + 82825804 CAACCTGCATCCACATGTGCCCTTTTCTACCACTCTGGGCTAATAAGAAATGCCAACTTCCAACAAGGAGATACATATGGTGACAGTGACATTTCCCTTCCCCAGAGAATGGGAAATTTCCCCTACGGTTAAGTTTAACAATGAAGACTGTAGATAAATGTAATT i chlSab2.chr23 C 0 C 0 s colAng1.NW_012117422v1 152755 165 - 815015 CAACCTGCATCCACATGTGCCCTTTTCTACCACTCTGGGCGAATAAGAAATGTCAACTTCCAACAAGGAGATAAATATGGTGACAGTGACATTTCCCTTCCCCAGAGAATGGGAAATTTCCCCTACGGTTAAGTTTAACAATGAAGACTGTAGATAAATGTAATT i colAng1.NW_012117422v1 C 0 C 0 s calJac3.chr2 140365385 163 - 204313951 CAATCTGTGTCCAAATGTGCCCATTTCTACCGCTCTAGGCGAGTAAGAAATGTCAGCttccaacaaggagatgactatggtaacaatgatgtttcccttctCCAGAGAATGGGACGTTTCCCCTAGGGTTATGTTTAGCCATTAAGAC--TGGATAAATCTAATT i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 33632 165 + 10068113 CAACCTACGTCCAAATGTGCCCATTTCTACCACTCTGGGCGAATAAGAAATGTCAGCTTCCAGCAAGGAGATGACTATCGTAACAATGACGTTTCCCTTCCTCAGAGAATGGGAAGTTTCCCCTAGGGTTAGGTTTAGCCATTAAGACTGTGGATAAATCTAATT i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016108322v1 93355 156 + 99478 CAACCTGCGTCCAAATGTGCCCATTTCTACCACTCTGGGCGAGTAAGAAATGTCAGCTTCCAAC---------ACTAGGGTAACAATGATGTTTTCCTTCCCCAGAGAATGGGAAGTTTCCCCTAGGGTTAGGTTTAGCCATTAAGACTGTGGATAAATCTAATT i cebCap1.NW_016108322v1 C 0 C 0 s aotNan1.NW_018505037v1 2594513 165 + 3417841 CAACCTGCATCCAAATGTGCCCATTTATACCACTCTGGGCGGGTAAGAAATGTCAGCTTCCAACAAGGAGATGACTCTGGTAACCATGACGTTTCCCTTCCCCCAAGAATGGGAAGTTTCCCCTAGGGTTAGGTTTAGCCATTAAGACTGCGGATAAATCTAATT i aotNan1.NW_018505037v1 C 0 N 0 a score=3036.000000 s hg38.chr5_KI270795v1_alt 131877 1 + 131892 G s gorGor5.CYUI01000356v1 109028 1 + 152767 G i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160371326 1 - 163208435 G i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3638966 1 - 180051392 G i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3828044 1 - 181584905 G i macFas5.chr6 C 0 C 0 s macNem1.NW_012020287v1 3849065 1 + 4899514 G i macNem1.NW_012020287v1 C 0 N 0 s cerAty1.NW_012001120v1 3571747 1 - 3647740 G i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79705971 1 + 82825804 G i chlSab2.chr23 C 0 C 0 s colAng1.NW_012117422v1 152920 1 - 815015 G i colAng1.NW_012117422v1 C 0 C 0 s calJac3.chr2 140365548 1 - 204313951 A i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 33797 1 + 10068113 A i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016108322v1 93511 1 + 99478 A i cebCap1.NW_016108322v1 C 0 C 0 a score=53864.000000 s hg38.chr5_KI270795v1_alt 131878 11 + 131892 CTATAGACAAG s gorGor5.CYUI01000356v1 109029 11 + 152767 CTATAGACAAG i gorGor5.CYUI01000356v1 C 0 C 0 s nomLeu3.chr2 160371327 11 - 163208435 CTATAGACAAG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr6 3638967 11 - 180051392 CTATAGACAAG i rheMac8.chr6 C 0 C 0 s macFas5.chr6 3828045 11 - 181584905 CTATAGACAAG i macFas5.chr6 C 0 C 0 s cerAty1.NW_012001120v1 3571748 11 - 3647740 CTATAGACAAG i cerAty1.NW_012001120v1 C 0 C 0 s chlSab2.chr23 79705972 11 + 82825804 CTATAGACAAG i chlSab2.chr23 C 0 C 0 s colAng1.NW_012117422v1 152921 11 - 815015 CTATAGACAAG i colAng1.NW_012117422v1 C 0 C 0 s calJac3.chr2 140365549 11 - 204313951 TTATAGACAAG i calJac3.chr2 C 0 C 0 s saiBol1.JH378186 33798 11 + 10068113 TTATAGACAAG i saiBol1.JH378186 C 0 C 0 s cebCap1.NW_016108322v1 93512 11 + 99478 TTATAGACAAG i cebCap1.NW_016108322v1 C 0 N 0 a score=10585.000000 s hg38.chr5_KI270795v1_alt 131889 3 + 131892 CTT s gorGor5.CYUI01000356v1 109040 3 + 152767 CTT i gorGor5.CYUI01000356v1 C 0 N 0 s nomLeu3.chr2 160371338 3 - 163208435 CTT i nomLeu3.chr2 C 0 N 0 s rheMac8.chr6 3638978 3 - 180051392 CTT i rheMac8.chr6 C 0 N 0 s macFas5.chr6 3828056 3 - 181584905 CTT i macFas5.chr6 C 0 N 0 s cerAty1.NW_012001120v1 3571759 3 - 3647740 CTT i cerAty1.NW_012001120v1 C 0 N 0 s chlSab2.chr23 79705983 3 + 82825804 CTT i chlSab2.chr23 C 0 N 0 s colAng1.NW_012117422v1 152932 3 - 815015 CTT i colAng1.NW_012117422v1 C 0 N 0 s calJac3.chr2 140365560 3 - 204313951 TTT i calJac3.chr2 C 0 N 0 s saiBol1.JH378186 33809 3 + 10068113 TTT i saiBol1.JH378186 C 0 N 0