##maf version=1 scoring=roast.v3.3 a score=753.000000 s hg38.chr6_KB021644v2_alt 0 2 + 185823 AC s panTro5.chr6 173454185 2 + 175400573 AC i panTro5.chr6 N 0 C 0 s panPan2.chr6 171717915 2 + 173848474 AC i panPan2.chr6 N 0 C 0 s macFas5.chr4 169001502 2 - 170955103 AT i macFas5.chr4 N 0 C 0 a score=72762.000000 s hg38.chr6_KB021644v2_alt 2 38 + 185823 GCTGGGGGGAAACGCCTGCAGCTGGCTCTTCCGGGCAT s panTro5.chr6 173454187 38 + 175400573 GCTGGGGGGAAACGCCTGCAGCTGGCTCTTCTGGGCAT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171717917 38 + 173848474 GCTGGGAGGAAACGCCTGCAGCTGGCTCTTCCGGGCAT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11402573 38 - 12463322 GCTGGGGGGAAACGCCTGCAGCTGGCTCTTCCGGGCAT i gorGor5.CYUI01015032v1 N 0 C 0 s rheMac8.chr4 170255893 38 + 172585720 GCTGGGAGGAAACGCCTGCAGCTGGCTCTTCTGGGCAT i rheMac8.chr4 N 0 C 0 s macFas5.chr4 169001504 38 - 170955103 GCTGGGAGGAAACGCCTGCAGCTGGCTCTTCTGGGCGT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8288764 38 + 10161646 GCTGGGAGGAAACACCTGCAGCTGGCTCTTCTGGGCAT i macNem1.NW_012011000v1 N 0 C 0 a score=172676.000000 s hg38.chr6_KB021644v2_alt 40 73 + 185823 CACTGAATTCCATGCTGGGGGGAAACGCCTGCAGCTGGCTCTTCCGGGCATCACTGAATTCCATGCTGGGGGG s panTro5.chr6 173454225 73 + 175400573 CACTGAATTCCATGCTGGTGGGAAACGCCTGCAGCTGGCTCTTCTGGCTGTCACTGAATTCCATGCTGGGGGG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171717955 72 + 173848474 CACTGAATTCCACGCTGG-GGGAAACGCCTGCAGCTGGCTCTTCCGGGCATCACTGAATTCCACGCTGGGGGG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11402611 72 - 12463322 CACTGAATTCCATGCTGG-GGGAAACGCCTGCAGCTGGCTCTTCCGGGCATCACTGAATTCCATGCTGGGGGG i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170255931 73 + 172585720 CACTGAATTCCATGCTGGGAGGAAACGCCTGCAGCTGGCTCTTCTGGGCGTCGCTGAATTCCATGCTGGGAGG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169001542 73 - 170955103 CACTGAATTCCATGCTGGGAGGAAACGCCTGCAGCTGGCTCTTCTGGGCGTCACTGAATTCCATGCTGGGAGG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8288802 73 + 10161646 CACTGAATTCCATGATGGGAGGAAACGCCTGCAGCTGGCTCTTCTGGGCATCACTGAATTCCATGCTGGGAGG i macNem1.NW_012011000v1 C 0 C 0 s manLeu1.NW_012106474v1 8140041 73 - 10857215 CACTGAATTCCATGCTGGGAGGAAACCCCTGCAGCTGGCTCTTCTGGGTGTCACTGAATTCCATGCTGGGGGG i manLeu1.NW_012106474v1 N 0 T 51 a score=73044.000000 s hg38.chr6_KB021644v2_alt 113 30 + 185823 AAACGCCTGCAGCTGGCTCTTCTGGGCATC s panTro5.chr6 173454298 30 + 175400573 AAACACCTGCAGCTGGCTCTTCTGGGCATT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171718027 30 + 173848474 AAACGCCTGCAGCTGGCTCTTCCGGGCATC i panPan2.chr6 C 0 I 142 s gorGor5.CYUI01015032v1 11402683 30 - 12463322 AAACGCCTGCAGCTGGCTCTTCCGGGCATC i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170256004 30 + 172585720 AAATACCTGCAGCTGGCTCTTCTGGGCATC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169001615 30 - 170955103 AAACGCCTGCAGCTGGCTCTTCTGGGCATC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8288875 30 + 10161646 AAACGCCTGCAGCTGGCTCTTCTGGGCATC i macNem1.NW_012011000v1 C 0 C 0 s manLeu1.NW_012106474v1 8140063 30 - 10857215 AAACCCCTGCAGCTGGCTCTTCTGGGTGTC i manLeu1.NW_012106474v1 T 51 C 0 a score=107312.000000 s hg38.chr6_KB021644v2_alt 143 45 + 185823 GCTGAATTCCATGCT-AGGGGGAAACGCCTACAGCTGGCTCTTCTG s panTro5.chr6 173454328 45 + 175400573 GCTGAATTCCATGCT-AGGGGGAAACGCCTACAGCTGGCTCTTCTG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171718199 45 + 173848474 GCTGAATTCCATGCT-AGGGGGAAACGCCTACAGCTGGCTCTTCTG i panPan2.chr6 I 142 C 0 s gorGor5.CYUI01015032v1 11402713 45 - 12463322 ACTGAATTCCATGCT-GGGGGGAAACGCCTGCAGCTGGCTCTTCCG i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170256034 45 + 172585720 ACTGAATTCCATGCT-GGGGGGAAACGCCTGCAGCTGGCTCTTCTG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169001645 45 - 170955103 ACTGAATTCCATGCT-GGGGGGAAACGCCTGCAGCTGGCTCTTCTG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8288905 45 + 10161646 ACTGAATTCCATGAT-GGGGGGAAACGCCTGCAGCTGGCTCTTCTG i macNem1.NW_012011000v1 C 0 C 0 s manLeu1.NW_012106474v1 8140093 46 - 10857215 ACTGAATTCCATGCTGGGGGGGAAATACCTGCAGCTGGCTTTTCTG i manLeu1.NW_012106474v1 C 0 C 0 a score=6152.000000 s hg38.chr6_KB021644v2_alt 188 2 + 185823 GG s panTro5.chr6 173454373 2 + 175400573 GG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171718244 2 + 173848474 GG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11402758 2 - 12463322 GG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156229677 2 + 157873769 GA i nomLeu3.chr3 N 0 C 0 s rheMac8.chr4 170256079 2 + 172585720 GG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169001690 2 - 170955103 GG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8288950 2 + 10161646 GG i macNem1.NW_012011000v1 C 0 C 0 s manLeu1.NW_012106474v1 8140139 2 - 10857215 GG i manLeu1.NW_012106474v1 C 0 T 52 a score=6718.000000 s hg38.chr6_KB021644v2_alt 190 3 + 185823 CGT s panTro5.chr6 173454375 3 + 175400573 CGT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171718246 3 + 173848474 CGT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11402760 3 - 12463322 CAT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156229679 3 + 157873769 TGT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170256081 3 + 172585720 TGT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169001692 3 - 170955103 TGT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8288952 3 + 10161646 TGT i macNem1.NW_012011000v1 C 0 C 0 s manLeu1.NW_012106474v1 8140089 3 - 10857215 TGT i manLeu1.NW_012106474v1 T 52 C 0 a score=213646.000000 s hg38.chr6_KB021644v2_alt 193 48 + 185823 CACTGAATTCCATGCT-GGGGGAAAATGCCTGCAGGTAGCTCTTCTGGG s panTro5.chr6 173454378 48 + 175400573 CACTGAATTCCATGCT-GGGGGAAAATGCCTGCAGGTGGCTCTTCTGGG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171718249 48 + 173848474 CACTGAATTCCATGCT-GGGGGAAAATGCCTGCAGGTGGCTCTTCTGGG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11402763 47 - 12463322 CACTGAATTCCATGCT-GGGGG-AAACGCCTGCAGCTGGCTCTTCCGGG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156229682 48 + 157873769 CACAGAATTCCATGCT-GGGAGGAAGTGTCTGCAGCTGGCTCTTCTGGG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170256084 48 + 172585720 CACTGAATTCCATGCT-GGGAGGAAACGCCTGCAGCTGGCTTTTCTGGG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169001695 48 - 170955103 CACTGAATTCCATGCT-GGGAGGAAACGCCTGCAGCTGGCTTTTCTGGG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8288955 48 + 10161646 CACTGAATTCCATGCT-GGGAGGAAACGCCTGCAGCTGGCTCTTCTGGG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1318389 48 + 3144229 CACTGAATTCCATGAT-GGGAGGAAATGCCTGCAGCTGGCTCTTCTGGG i cerAty1.NW_012002071v1 N 0 C 0 s chlSab2.chr13 96597829 48 + 98384682 CACTGAATTCCATGCT-GGGAGGAAACGCCTGCGGCTGGCTCTTCTGGG i chlSab2.chr13 N 0 C 0 s manLeu1.NW_012106474v1 8140092 49 - 10857215 CACTGAATTCCATGCTGGGGGGGAAATACCTGCAGCTGGCTTTTCTGGG i manLeu1.NW_012106474v1 C 0 T 26 a score=6318.000000 s hg38.chr6_KB021644v2_alt 241 2 + 185823 CA s panTro5.chr6 173454426 2 + 175400573 CA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171718297 2 + 173848474 CA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11402810 2 - 12463322 CA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156229730 2 + 157873769 CA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170256132 2 + 172585720 CA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169001743 2 - 170955103 CA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8289003 2 + 10161646 CA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1318437 2 + 3144229 CA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96597877 2 + 98384682 TG i chlSab2.chr13 C 0 C 0 e manLeu1.NW_012106474v1 8140141 26 - 10857215 T a score=15510.000000 s hg38.chr6_KB021644v2_alt 243 3 + 185823 TCA s panTro5.chr6 173454428 3 + 175400573 TCA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171718299 3 + 173848474 TCA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11402812 3 - 12463322 TCA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156229732 3 + 157873769 TCA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170256134 3 + 172585720 TCA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169001745 3 - 170955103 TCA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8289005 3 + 10161646 TCA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1318439 3 + 3144229 TCA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96597879 3 + 98384682 TCA i chlSab2.chr13 C 0 C 0 s canFam3.chr1 56096792 3 + 122678785 tca i canFam3.chr1 N 0 C 0 e manLeu1.NW_012106474v1 8140141 26 - 10857215 T a score=101359.000000 s hg38.chr6_KB021644v2_alt 246 20 + 185823 CTGAATTCCATGCT-GGGAGG s panTro5.chr6 173454431 20 + 175400573 CTGAATTCCATGCT-GGGAGG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171718302 20 + 173848474 CTGAATTCCATGCT-GGGAGG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11402815 20 - 12463322 CTGAATTCCATGCT-GGGGGG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156229735 20 + 157873769 CTGAATTCCATGCT-GGGAGG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170256137 20 + 172585720 CTGAATTCCATGCT-GGGGGT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169001748 20 - 170955103 CTGAATTCCATGCT-GGGGGG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8289008 20 + 10161646 CTGAATTCCATGCT-GGGGGG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1318442 21 + 3144229 CTGAATTCCATGCTGGGGGGG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96597882 20 + 98384682 CTGAATTCCATGCT-GGGGGG i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15536100 20 - 23502949 CTGAATTCCATGCT-GGGGGG i colAng1.NW_012114488v1 N 0 C 0 s canFam3.chr1 56096795 18 + 122678785 ctgaacccgaagct-gggg-- i canFam3.chr1 C 0 C 0 e manLeu1.NW_012106474v1 8140141 26 - 10857215 T a score=2410014.000000 s hg38.chr6_KB021644v2_alt 266 395 + 185823 AAATGCCTGCAGCTGGCTCTTCTGGGCC---AG-------CAGGTCCGGCTGCCCTCCTGcttatcatcatctgacattgaataaagtttgcttatttattttgatcaagctctgtggagcagagattgttgcctgttttgttcagtgctgcatcttctatgtctaaaataatgcctTCCTTGAAC-------------TATTTGATGGATCAGGGGTGTGGAAAGCTCTATGGTTTGCCTGGCCACGTGAGGGGGACTTCATCTGCATTTCCATGAAGCTGGAGGATGAAGGTGGGAAGACGGGTGTCTGCTTCATGTTCATGCTACTCATGAAAACAACGACC--------------AACACA-GAAG-----ATGAAAA-GGACGTACAAAGTAATGAAACTGATAACCAAG-----GGATAAGAGAGACATAATAATCAC s panTro5.chr6 173454451 395 + 175400573 AAATGCCTGCAGCTGGCTCTTCTGGGCC---AG-------CAGGTCCGGCTGCCCTCCTGcttatcatcatctgacattgaataaagtttgcttatttattttgatcaagctctgtggagcagagattgttgcctgttttgttcagtgctgcatcttctatgtctagaataatgcctTCCTTGAAC-------------TATTTGATGGATCAGGGGTGTGGAAAGCTCTATGGTTTGCCTGGTCACGTGAGGGGGACTTCATCTGCATTTCCATGAAGCTGGAGGATGAAGGTGGGAAGACGGGTGTCTGCTTCATGTTCATGCTACTCATGAAAACAACGACC--------------AACACA-GAAG-----ATGAAAA-GGACATACAAAGTAATGAAACTGATAACCAAG-----GGATAAGAGAGACATAATAATCAC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171718322 395 + 173848474 AAATGCCTGCAGCTGGCTCTTCTGGGCC---AG-------CAGGTCCGGCTGCCCTCCTGcttatcatcatctgacattgaataaagtttgcttatttattttgatcaagctctgtggagcagagattgttgcctgttttgttcagtgctgcatcttctatgtctagaataatgcctTCCTTGAAC-------------TATTTGATGGATCAGGGGTGTGGAAAGCTCTATGGTTTGCCTGGCCACGTGAGGGGGACTTCATCTGCATTTCCATGAAGCTGGAGGATGAAGGTGGGAAGACGGGTGTCTGCTTCATGTTCATGCTACTCATGAAAACAACGACC--------------AACACA-GAAG-----ATGAAAA-GGACATACAAAGTAATGAAACTGATAACCAAG-----GGATAAGAGAGACATAATAATCAC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11402835 392 - 12463322 AAACGCCTGCAGCTGGctcttctgggcc---ag-------caggtcc-gctgccctcctgcttatcatcatctgacattaaataaagtttgcttatttattctgatcaagctctgtggagcagagattgttgcctgttttgttcagtgctgcatcttctatgtctaaaataatgcATTCCTTGAAC-------------TATTTGATGGATCAGGGGTGTGGAAGGCTCTATGGTTTGCCTGGCAACGTGAGGGGGACTTCATCTGCATTTCCATGAAGCTGGAGGATGAA-GTGGGAAGACGGGTGTCTCCTTCATGTTCATGCTACTCATGAAAACAATGACC--------------AACAC--GAAG-----ATGAAAA-GGACATACAAAGTAATGAAACTGATAACCAAG-----GGATAAGAGAGACATAATAATCAC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156229755 395 + 157873769 AAATGCCTGCAGCTGGCTTTTCTGGACC---AG-------CAGGTCCAGCTGCCCTCCTGcttatcatcatctgacattgaataaggtttgcttatttattttgatgaagctctgtggagcagagattgttgcctgttttgttcagtgctgcatcccctgtgtgtaaaataacgcttTCCTTGGAC-------------TATTTGATGGATCAGGGGTGTGGAAAGCTCTATGGTTTGCCTGGCCATGTGAGGGGGACTTCATCAGCATTTCCATGAAGCTGGAGGATGAAGGTGGGAAGACGGGTGTCTGCTTCATGTTCATGCTGCTCATGAAAACAACGACC--------------AACACA-GAAG-----ATGAAAA-CGACATACAAAGTAACTAAACTGATAACCAAG-----GGATAAGAGAGACCTAATAATCAC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170256157 395 + 172585720 AAACGCCTGCAGCTGGCTTTTCTGGGCC---AG-------CAGGTTCAGCTGCCCTCCTGcttatcatcatctgacattgaataaagtttgcttatttattttgatcaagctctgtggagcagagattgttgcttgttttgttcagtgctgcatcctctatgtctaaaataatgcctTCCTCGAAC-------------TATTTGATTGATCAGGGGTGTGGAAAGGTATATGATTTGCCTGGCCACGTGAGGGGGACTTCATCTGTGTTTCCATGAAATGGGAGGATGAAGGTGGGAAGATGGGCATCTGCTTCATGTTCATGCTACTCATGAAAACAACGGCC--------------AACACA-GAAG-----ATGAGAA-GGACGTACAAAGTAATTAAACTGATAACCAAG-----GGACAAGAGAGACATAATAATCAC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169001768 395 - 170955103 AAATGCCTGCAGCTGGCTTTTCTGGGCC---AG-------CAGGTTCAGCTGCCCTCCTGcttatcatcatctgacattgaataaagtttgcttatttattttgatcaagctctgtggagcagagattgttgcttgttttgttcagtgctgcatcctctatgtctaaaataatgcctTCCTCGAAC-------------TATTTGATTGATCAGGGGTGTGGAAAGGTATATGATTTGCCTGGCCACGTGAGGGGGACTTCATCTGTGTTTCCATGAAATGGGAGGATGAAGGTGGGAAGATGGGCATCTGCTTCATGTTCATGCTACTCATGAAAACAACGGCC--------------AACACA-GAAG-----ATGAGAA-GGACGTACAAAGTAATTAAACTGATAACCAAG-----GGACAAGAGAGACATAATAATCAC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8289028 394 + 10161646 AAACGCCTGCAGCTGGCTCTTCTGGGCC---AG-------CAGGTTCAGCTGCCCTCCTGcttatcatcatctgacattgaataaagtttgcttatttattttgatcaagctctgtggagcagagattgttgcttgttttgttcagtgctgcatcctctatgtctaaaataatgcctTCCTCGAAC-------------TA-TTGATTGATCAGGGGTGTGGAAAGGTATATGATTTGCCTGGCCACGTGAGGGGGACTTCATCTGTGTTTCCATGAAATGGGAGGATGAAGGTGGGAAGATGGGCATCTGCTTCATGTTCATGCTACTCATGAAAACAACGGCC--------------AACACA-GAAG-----ATGAGAA-GGACGTACAAAGTAATTAAACTGATAACCAAG-----GGACAAGAGAGACATAATAATCAC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1318463 395 + 3144229 AAATGCCTGCAGCTGGCTTTTCTGGGGC---AG-------CAGGTTCAGCTGCCCTCCTGcttatcatcatctgacattgaataaagtttgcttatttatttcgatgaagctctgtggaacagagattgttgcttgttttgttcagtgctgcatcctccatgtctaaaataatgcctTCCTCGAAC-------------TATTTGATTGATCAGGGGTGTGGAAAGGTATATGATTTGCCTGGCCACGTGAGGGGGACTTCATCTGTGTTTCCATGAAACGGGAGGATGAAGGTGGGAAGATGGGCGTCTGCTTCATGTTCATGCTACTCGTGAAAACAACGGCC--------------AACACA-GAAG-----ATGAGAA-GGACGTACAAAGTAATTAAACTGATAACCAAG-----GGACAAGAGAGACATACTAATCAC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96597902 394 + 98384682 AAATGCCTGCAGCTGACTTTTCTGGGCC---AG-------CAGGTTCAGCTGCCCTCCTGcttatcatcatctgacattgaataaagtttgcttatttatttcgatcaagctctgtggagcagagattgttgcttgttttgttcagtgctgcatcctctatgtctaaaataatgcctTCCTCAAAC-------------TATTTGATTGATC-GGGGTGTGGAAAGGTATACGATTTGTCTGGCCACCTGAGGGGGACTTCATCTGCGTTTCCATGAAACGGGAGGATGAAGGTGTGAAGATGGGCGTCTGCTTCATGTTCATGCTACTCGTGAAAACAACGGCC--------------AACACA-GAAG-----ATGAAAA-GGACGTACAAAGTAATTAAACTGATAACCAAG-----GGACAAGAGAGACATAATAATCAC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8140115 395 - 10857215 AAATACCTGCAGCTGGCTTTTCTGGGGC---AG-------CAGGTTCAGCTGCCCTCCTGCTTATCATCATCTGACATTGAATAAAGTTTGCTTATTTATTTCAATGAAGCTCTGTGGAGCAGAGATTGTTGCTTGTTTGGTTCAGTGCTGCATCCTCCATGTCTAAAATAATGCCTTCCTCGAAC-------------TATTTGATTGATCAGGGGTGTGGAAAGGTATATGATTTGCCTGGCCACGTGAGGGGGACTTCATTTGCGTTTCCATGAAACGGGAGGATGAAGGTGGGAAGATGGGCGTCTGCTTCATGTTCATGCTACTCGTGAAAACAACGGCC--------------AACACA-GAAG-----ATGAGAA-GGACGTACAAAGTAATTAAACTGATAACCAAG-----GGACAAGAGAGACATACTAATCAC i manLeu1.NW_012106474v1 T 26 M 1715 s colAng1.NW_012114488v1 15536120 395 - 23502949 AAATGCCTGCAGCTGGCTTTTCTGGGCC---AG-------CAGGTTCAGCTGCCCTCCTGcttatcatcatctgaccttgaataaagtttgcttatttatttcgatcaagctctgtagagcagagattgttgcttattttgttcaatgctgcatcctctatgtctaaaataatgcctTCCTCAAAC-------------TGTTTGATTGATCAGGGGTGTGAAAAGGTATATGATTTGCCTGGCCACGTGAGGGGGATTTCATCTGCGTTTCCATGAAACGGGAGGATGAAGGTGGGAAGATGGGCGTCTGCTTCATGTTCATGCTACTCATGAAAACAACAGCC--------------AACACA-GAAG-----ATGAGAA-GGACGTACAAAGTAATTAAACTGATAACCAGG-----GGACAAGAGAGACATAATCATCAC i colAng1.NW_012114488v1 C 0 C 0 s canFam3.chr1 56096813 335 + 122678785 --aAGTCCGC------CCATTCCACACCCTAAG-------CCGAGGCAACTCAGCTCCTTCCTGTCACC--CCGACATTGCTCATCATTTCCTTCCTTCCTCT----AAGGTCCGTGGAGAACAGATTCTCTTCTGTTTGGTTCACAGCTGGATGCCCCATGTCTTGATAAACACCTGC-------------------------GAGTGAAC---GGTGTTGACAGACCTGGTGTCCTCCTGGCCCCCGGGCCGTGAACTCCTC---ATTTCCCTAAAGCCAGAGTGGGAAGGTGGGGGAA---ACGTCTG-------------------GTGAAAAAAGTGGAC--------------TGCACA-GTGG-----G---------------AGGGCAAGTGCACTGACCAAGAAGATGGTGCAGAAAGTGGACCTGACAGTCGA i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 481421 430 + 760995 aaatgcacaaattcaactctcctgatcc---agtagaggacagctccagc-acactacttcttatcaccatctgacattgcacaaattttactgatttatttcatttaaggtctgtggtgcaaacatttttgtgtgctttgttcaatgctatattctctgtgtttaacacaatgccttcataaaacaggcactcaaaaatatgtgatgaatgaatgGTGTTGAAAGGTCTATCGTTTGCCTGACCACTTGACAGTGATTTCATTCATATTTCCATGAATCATGGGGATAAGAGTGGAAAA---GATATTTGCTTTATACTCATATTATTAGAGAAAATAATAGCCTAGAGTATAAAGAAAACACATGGAGTTGCTATGAAAGTGGATATGCAAAATAAT--AACAAATAATCAAG-----GAATGGTAAAGATTTCACTATTAC i dasNov3.JH569188 N 0 C 0 a score=727946.000000 s hg38.chr6_KB021644v2_alt 661 146 + 185823 CACATGGACACGC-------CTAAGTGCAGGTCGAAGCAC--CAGAATTCCAATTCTGTGATCATAGCCATGGTAATAACTTTGAGGCAGGCTCCATTTTGAAACATAAATAAACAGAAAAATGAATAGCTCTTCCTGTCAACAGGGTTGCTCTC s panTro5.chr6 173454846 146 + 175400573 CACCTGGACACGC-------CTAAGTGCAGGTCGAAGCAC--CAGAATTCCAATTCTGTGATCATAGCCGTGGTAATGACTTTGAGGCAGGCTCCATTTTGAAACATAAATAAACAGAAAAATGAATAGCTCTTCCTGTCAACAGGGTTGCTCTC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171718717 146 + 173848474 CACCTGGACATGC-------CTAAGTGCAGGTCGAAGCAC--CAGAATTCCAATTCTGTGATCATAGCCGTGGTAATGACTTTGAGGCAGGCTCCATTTTGAAACATAAATAAACAGAAAAATGAATAGCTCTTCCTGTCAACAGGGTTGCTCTC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11403227 146 - 12463322 CATGTGGACACGC-------CTAAGTGTAGGTCGAAGCAC--CAGAATTCCAATTCTGTGATCATAGCCATGGTAATGACTTTGAGGCAGGCTCCATTTTGAAACATAAATAAACAGAAAAATGAATAGCTCTTCCTGTCAACAGGGATGCTCTC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156230150 146 + 157873769 CATGTGGACACGC-------CTAAGTGCAGGTTGAAACAC--CAGAATCCCAATTCTGTGATCATAGCTATGATAATGGCTTTGAGGCAGGCTCAATTTTGCAACATAAATAAACAGAAAAATGAGTAGCTCTTCCTATCAACAGAGATGCTCTC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170256552 146 + 172585720 CGAGGGGACATGC-------CTAAGTGCAGGTCAAAGCAC--CAGAATTCCAATTCTGTGATCATAGCTATGGTAATGAGTTTGAGGCAGGCTCAACTTTGAAACATAAATAAACAGAAAAATGAATAGCTCTTCCTATCAACAGAGATGCTTTC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169002163 146 - 170955103 CGAGGGGACATGC-------CTAAGTGCAGGTCAAAGCAC--CAGAATTCCAATTCTGTGATCATAGCTATGGTAATGAGTTTGAGGCAGGCTCAACTTTGAAACATAAATAAACAGAAAAATGAATAGCTCTTCCTATCAACAGAGATGCTTTC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8289422 146 + 10161646 CGAGGGGACATGC-------CTAAGTGCAGGTCAAAGCAC--CAGAATTCCAATTCTGTGATCATAGCTATGGTAATGAGTTTGAGGCAGGCTCAACTTTGAAACATAAATAAACAGAAAAATGAATAGCTCTTCCTATCAACAGAGATGCTTTC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1318858 146 + 3144229 CGAGGGGACATGC-------CTAAGTGCAGGTCAAAGCAC--CAGAATCCCAATTCTGTGATCATAGCTATGGTAATGAGTTTGAGGCAGGCTCAACTTTGAAACATAAACAAACAGAAAAATGAATAGCTCTTCCTATCAACAGAGATGCTTTC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96598296 146 + 98384682 CAAGGGGACACGC-------CTAAGTGCAGGTCAAAGCAC--CAGAATTCCAATTCTGTGATCACAGCTATGGTAATGACTTTGAGGCAGGCTCAACTTTGAAACATAAATAAACAGAAAAATGAATAGCTCTTCCTATCGACAGAGATGCTTTC i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15536515 146 - 23502949 CGAGGGGACATGC-------CTAAGTGCAGGTCAAAGCAC--CAGAATTCCAATTCTGTGATCATAGCTATGGTAATGAGTTTGAGGCAGGCTCAACTTTGAAACATAAATAAACAGAAAAATGAATAGCTCTTCCTATCAACAGAGATGCTTTC i colAng1.NW_012114488v1 C 0 C 0 s canFam3.chr1 56097148 118 + 122678785 -----GAAAGTAC-------CT---TGCCCCCCGAGTCTC-TCAGAACTCCAAAACTGTGACTCTAGTGTTGACGGTAACCTTGACACATACACCA-TTTGGAACACAAATACATGGAAAAGTGAATAGCTTTCC-------------------- i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 481851 146 + 760995 --------CATACAAGAAATCTAAatttggctttcagtctctcagaattccaaag-tgctataagtgctgtgataatatttttgagttgtgtatacctttggaccacaagtaaacagaaaaacaaaaatctcttcatatatgcAGAGATGCTTCT i dasNov3.JH569188 C 0 C 0 e manLeu1.NW_012106474v1 8140510 1715 - 10857215 M a score=937737.000000 s hg38.chr6_KB021644v2_alt 807 140 + 185823 CACACTCTT-GTACATAAA-GAATGGTGATCTTTCACTCGGAAGAGCCAGCAAGGGATGACCCAGGAAATTGCACTGAG----AAAACTT-GCAGCTTCTATGAAAATAAAATTAAATAGATATTTAATTCCATTCTTC-----AAATCCCA----- s panTro5.chr6 173454992 140 + 175400573 CACACTCTT-GTACATAAA-GAATGGCGATCTTTCACTCGGAAGAGCCAGCAAGGGAAGACCCAGGAAATTGCACTGAG----AAAACTT-GCAGCTTCTATGAAAATAAAATTAAATAGATATTTAATTCCATTCTTC-----AAATCCCA----- i panTro5.chr6 C 0 C 0 s panPan2.chr6 171718863 140 + 173848474 CACACTCTT-GTACATAAA-GAATGGCGATCTTTCACTCGGAAGAGCCAGCAAGGGAAGACCCAGGAAATTGCACTGAG----AAAACTT-GCAGCTTCTATGAAAATAAAATTAAATAGATATTTAATTCCATTCTTC-----AAATCCCA----- i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11403373 140 - 12463322 CACACTCTT-GTACATAAA-GAATGGCGATCTTTCACTTGGAAGAGCCAGCAAGGGATGACCCAGGAAATTGCACTGAG----AAAACTT-GCAGCTTCTATGAAAATAAAATTAAATAGATATTTAATTCCATTCTTC-----AAATCCCA----- i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156230296 140 + 157873769 CACACTCTT-GTACATAAA-GAACGGCGATCTTTCACTCGGAAGAGCCAGCAAAGGATGACCCATGAAATTGCACTGAG----AAGACTT-GCAACTTCTGTGAAAATAAAATTAAATAGATATTTAATTCCCTTCTTC-----AAATCCCA----- i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170256698 141 + 172585720 CACACTCTT-GTATGTAAA-GAATGGCGATCTTTCTCTCGGAAGAGCCAGCAAAGGATGACCCAGGAAATTGTACTGAT----AAAACTTGGCAACTTCTATGAAAATAAAATTAAATAGATATTTAATACCATTCTTC-----AGATCCCA----- i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169002309 141 - 170955103 CACACTCTT-GTATGTGAA-GAATGGCGATCTTTCTCTCGGAAGAGCCAGCAAAGGATGACCCAGGAAATTGTACTGAT----AAAACTTGGCAACTTCTATGAAAATAAAATTAAATAGATATTTAATACCATTCTTC-----AGATCCCA----- i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8289568 141 + 10161646 CACACTCTT-GTATGTGAA-GAATGGCGATCTTTCTCTCGGAAGAGCCAGCAAAGGATGACCCAGGAAATTGTACTGAT----AAAACTTGGCAACTTCTATGAAAATAAAATTAAATAGATATTTAATACCATTCTTC-----AGATCCCA----- i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1319004 141 + 3144229 CACACTCTT-GTGTGTGAA-GAATGGCGATCTTTCTCTCGGAGGAGCCAGCAAAGGATGACCCAGGAAATTGTACTGAT----AAAACTTGGCAACTTCTATGAAAATAAAATTAAATAGATATTTAATACCATTCTTC-----AGATCCCT----- i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96598442 141 + 98384682 CACACTCTT-GTACGTGAA-GAATGGCGATCTTTCTCTCGGAAGAGCCGGCAAAGGATGACCCAGGAAATTGTACTGAT----AAAACTTGGCAACTTCTATGAAAATAAAATTAAATAGATATTTAATACCATTCTTC-----AGATCCCA----- i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15536661 141 - 23502949 CACACTCTT-GTACGCGAA-GAATGGCGATCTTTCTCTCAGAAGAACCAGCAAAGGATGACCCAGGAAATTGCACTGAT----AAAACTTGGCAACTTCTATGAAAATAAAATTAAATAGATATTTAATACCATTCCTC-----CGATCCCA----- i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169802704 140 + 171630274 CACACTCTT-GCACATGAA-GAATGGCGATCTTCCACTGGGAAGACCCAGCAAAGGATGA-CCAGAAAATCGCACTGAG----AAAACTCGGGTTCCTCTATGAAAATAAAATTAAACATCTAATAAATACCACTCATC-----AAACCCCG----- i calJac3.chr4 N 0 C 0 s cebCap1.NW_016107695v1 1179954 140 - 2164891 CACACTCTT-GTACGTGAA-GAATGACGATCTTTCACTGGGAAAAGCCAGCAAAGGATAA-CCAGGAAATCGCACTGAG----AAAACTCGGATACCTATATGGAAATAAAATTGAATATCTATTTAATACCATTCTTC-----AAACTCCA----- i cebCap1.NW_016107695v1 N 0 C 0 s canFam3.chr1 56097266 142 + 122678785 ----------ATATATAAAGGAGTGGTTATATTTCACCCAGGCGGTTCAGGGAAGGATTACTTTAGAAATCGTGCCAAGAAAAAAAAAATGACTGTTTACACAAAAATAAAATTAAATACGTATTTAATACCGTTCTTCAAAATAAACTCCA----- i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 481997 149 + 760995 CATACTCTTCACATATAAAAGAATGATCATATTTCACTTGGAAGATCCAGGAAAGGATTATTCCAGAAATCATGCAGAG--TGAGGAACTGGCTCTCTATACAAACATAAAATGAAATATTT-TTAAATGCCATTCTTC-----AAAATCAAGTCCA i dasNov3.JH569188 C 0 C 0 e manLeu1.NW_012106474v1 8140510 1715 - 10857215 M a score=3403032.000000 s hg38.chr6_KB021644v2_alt 947 405 + 185823 AACCTAGATCAAA-A-GAAGACCTTTCAAGAATCAGACAC--AGATGTGAGAGAATAATCATCTTAAATCAAGAT-GTAGAA---TTTCCCAAGTAAAATCTCAGAAAATGAA--------AAGAGAAGTATTTATAAATATTATTTTATAAACAAAAAGTTGTATGTTTAAACTTTATAGAGCAAATTAAATTAAAAATAATAACTGGAAATAACCTTCAATAATACTT-AATAAGTAACATATACCAACCAATAAAAACAGTAAAATTGCTTT-aaaacttgacaaatgacatgaataaaatatttgcagaaaagg-------at----------aagtcaaaatggct----------aaatccatgtcaaaatgtgcagaataatataatcttatactg-tttcacctatcaaattagcaaataattttaaaagttctattcctcat s panTro5.chr6 173455132 405 + 175400573 AACCTAGATCAAA-A-GAAGACCTTTCAAGAATCAGACAC--AGATGTGAGAGAATAATCATCTTAAATCAAGAT-GTAGAA---TTTCCCAAGTAAAATCTCAGAAAATGAA--------AAGAGAAGTATTTATAAATATTATTTTATAAACAAAAAGTTGTATGTTTAAACTTTATAGAGCAAATTAAATTAAAAATAATAACTGGAAATAACCTTCAATAATACTT-AATAAGTAATATATGCCAACCAATAAAAACAGTAAAATTGCTTT-GAAACTTGACAAATGACGTGAATAAAATATTTGCAGAAAAGG-------AT----------AAGTTAAAATGGCT----------AAATCCATGTCAAAATGTGCAGAATAATATAATCTTATACTG-tttcacctatcaaattagcaaataattttaaaagttctattcctcat i panTro5.chr6 C 0 C 0 s panPan2.chr6 171719003 405 + 173848474 AACCTAGATCAAA-A-GAAGACCTTTCAAGAATCAGACAC--AGATGTGAGAGAATAATCATCTTAAATCAAGAT-GTAGAA---TTTCCCAAGTAAAATCTCAGAAAATGAA--------AAGAGAAGTATTTATAAATATTATTTTATAAACAAAAAGTTGTATGTTTAAACTTTATAGAGCAAATTAAATTAAAAATAATAACTGGAAATAACCTTCAATAATACTT-AATAAGTAATATATACCAACCAATAAAAACAGTAAAATTGCTTT-GAAACTTGACAAATGACGTGAATAAAATATTTGCAGAAAAGG-------AT----------AAGTTAAAATGGCT----------AAATCCATGTCAAAATGTGCAGAATAATATAATCTTATACTG-tttcacctatcaaattagcaaataattttaaaagttctattcctcat i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11403513 405 - 12463322 AACCTAGATCAAA-A-GAAGACCTTTCAAGAATCAGACAC--AGATGTGAGAGAATAATCATCTTAAATCAAGAT-GTAGAA---TTTCCCAAGTAAAATCTCAGAAAATGAA--------AAGAGAAGTATTTATAAATATTATTTTATAAACAAAAAGTTGTATGTTTAAACTTTATAGAGCAAATTAAATTAAAAACAATAACTGGAAATAACCTTCAATAATACTT-AATAAGTAACATATACCAACCAATAAAAATAGTAAAATTGCTTT-aaaacttgacaaatgacatgaataaaatatttgcagaaaagg-------at----------aagtcaaaatggct----------aaatccatgtcaaaatgtgcagaataatataatcttatactg-tttcacccatcaaattagcaaataatttaaaaagttctattcctcat i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156230436 405 + 157873769 AACCTAGATCAAA-A-GAAGACCTTTCAAGAATCAGACAC--AGATGTGAGAGAATAATAATCTTAAATCAAGAT-GTAGAA---TTTCCCAAGTAAAATCTCAGAAAATGAA--------AAGAGAAGTATTTATAAATATTACTTTATAAACAAAAAGTTGTACGTTTAAACTTTATAGAGCAAATTAAATTGAAAACAATAACTGCAAATAACCTTCAATAATACTT-AATAAGTGACATATACCAACCAATAAAAATAGTAAAATTGCTTT-AAAACTTGACAAATGACATGAATAAAATATTTGCAGAAAAGG-------AT----------AAGTCAAAATGGCT----------AAATCCAGGTCCAAATGTGCAGAATAATATAATCTTATACTG-tttcacctatcatattagcaaataattttaaaagttctattcctcat i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170256839 405 + 172585720 AACCTAGATCAAA-A-GAAGACCTTTCAAGAATCAGACAC--AGATGTGAGAGAATAATAATCTTGAATCAAGAT-GTAGAA---TTTCCCAAGTAAAATCTCAGAAAATGAA--------AAGAGAAATATTTATAAATATTATTTTATAAACAAAAAGTTGTATGTTTCAACTTCATAGAGCAAATTAAATTAAAAATGATAACTGGAAATAACCTTTAATAATACTT-AATAAGTAACATATACCAACCAATAAAAATAGTAAAATTGCTTT-AAAACTTGACAAACGACATGAATAAAATATTTGCAGACAAAG-------AT----------AAGTCAGAATGGTT----------AAATCTATGTCAAAATGTGCAGAATAATATAATCTTATACTG-tttcacctatcaaattagcaaataattttaaaagttctattcctcat i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169002450 405 - 170955103 AACCTAGATCAAA-A-GAAGACCTTTCAAGAATCAGACAC--AGATGTGAGAGAATAATAATCTTGAATCAAGAT-GTAGAA---TTTCCCAAGTAAAATCTCAGAAAATGAA--------AAGAGAAATATTTATAAATATTATTTTATAAACAAAAAGTTGTATGTTTCAACTTCATAGAGCAAATTAAATTAAAAATGATAACTGGAAATAACCTTTAATAATACTT-AATAAGTAACATATACCAACCAATAAAAATAGTAAAATTGCTTT-AAAACTTGACAAACGACATGAATAAAATATTTGCAGACAAAG-------AT----------AAGTCAGAATGGTT----------AAATCTATGTCAAAATGTGCAGAATAATATAATCTTATACTG-tttcacctatcaaattagcaaataattttaaaagttctattcctcat i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8289709 405 + 10161646 AACCTAGATCAAA-A-GAAGACCTTTCAAGAATCAGACAC--AGATGTGAGAGAATAATAATCTTGAATCAAGAT-GTAGAA---TTTCCCAAGTAAAATCTCAGAAAATGAA--------AAGAGAAATATTTATAAATATTATTTTATAAACAAAAAGTTGTATGTTTCAACTTCATAGAGCAAATTAAATTAAAAATGATAACTGGAAATAACCTTTAATAATACTT-AATAAGTAACATATACCAACCAATAAAAATAGTAAAATTGCTTT-AAAACTTGACAAACGACATGAATAAAATATTTGCAGACAAAG-------AT----------AAGTCAGAATGGTT----------AAATCTATGTCAAAATGTGCAGAATAATATAATCTTATGCTG-tttcacctatcaaattagcaaataattttaaaagttctattcctcat i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1319145 405 + 3144229 AACCTAGATCAAA-A-GAAGACCTTTCAAGAATCAGACAC--AGATGTGAGAGAATAATAATCTTGAATCAAGAT-GTAGAA---TTTCCCAAGTAAAATCTCAGAAAATGAA--------AAGAGAAATATTTATAAATATTATTTTATAAACAAAAAGTTGTATGTTTAAACTTCATAGAGAAAATTAAATTAAAAACAATAACTGGAAATAACCTTTAATGATACTT-AATAAGTAACATATACCAACCAATAAAAATAGTAAAATTGCTTT-AAAACTTGACAAATGACACGAATAAAATATTTGCAGACAAGG-------AT----------AAGTCAGAATGGTT----------AAATCCATGTCAAAATGTGCAGAATAATATAATTTTATACTG-tttcacctatcaaattatcaaataattttaaaagttctattcctcat i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96598583 404 + 98384682 AACCTAGATCAAA-A-GACGACCTTTCAAGAATCAGACAC--AGATGTGAGAGAATAATAATCTTGAATCAAGAT-GTAGAA---TTTCCCAAGT-AAATCTCAGAAAATGAA--------AAGAGAAATATTTATAAATATTATTTTATAAACAAAAAGTTGTATGTTTAAACTTCATAGAGAAAATTAAATTAAAAACAATAACTGGAAATAACCTTTAATGATACTT-AATAAGTAACATATACCAACCAATAAAAATAGTAAAATTGCTTT-AAAACTTGACAAACGAGATGAATAAAATATTTGCAGACAAGG-------AT----------AAGTCAGAATGGTT----------AAATCCGTGTCAAAATGTGCAGAATAATATAATTTTATACTG-tttcatctatcaaattatcaaataattttaaaagttctgttcctcat i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15536802 404 - 23502949 AACCTAGATCCAA-A-GAAGACCTTTCAAGAATCAGACAC--AGATGTGAGAGAATAATAATCTTGAATTAAGAT-GTAGAA---TTTTCCAAGTAAAATCTCAGAAAATGAA--------AAGAGAAATATTTACAAATATTATTTTATAAACAAAAAGTTGTATGTTTAAACTTCATAGAGCAAGTTAAATTAAAAATGATAACTGGAAATAACCTTTAATAATACTT-AATAAGTAACATATACCAACCAA-AAAAATAGTAAAATTGCTTT-aaaacttgacaaaagacatgaataaaatatttgcagaagagg-------at----------aagtcagaatggct----------aaatccatgtcaaaacgtgcagaataatataatcttatactg-tttcacctatcagattagcaaataattttaaaaattctattcctcat i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169802844 402 + 171630274 AACCTAGATCAAA-A-GAAGACCTTTAAAGAACCAGACAC--AGATGTGAGAGAATAATAATATTAAAACAAGAT-GTAGGA---TTTCCCAAGTAAAATCTCAGAAAGCAAA--------AAGAGaaatatttataaattttattttGTAAACAAAAACTTATATCTTTAAACTTTATGGAGAAAATTAAATTAAAATCAAAAACAGGAAATAACCTTCAATAATACTT-AATAAGTAACATACACCAGCCAATAAAAATAGTACAACTGCATT-AAAACTTGACAAATGGCGTGAATGAAGTGTTTGCAGAAAAGG-------A-----------AAGTCGAAATGCCT-----------AATTCATATCAAAATGCGCAGAATAATATAATCTTACGCTG-TTTCGCCT-CCAAGTTAGCAAATAATTTTACAAGCTCTAATCCTCAT i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1180094 404 - 2164891 AACCTAGATCAAA-A-GAAGACTTTTAAAGAACCAGACAC--AGATGTGAGAGAATAATGATACTAAATCAAGAT-GTAGAA---TGTCCCAAGTAAAATCTCAGAAAATAAA--------AAGAGAAACATTTATAAAAATTATTTTATAAACAAAAAGTTATATGTTTAAACTTTATAGAGCAAATTAAATTAAAAACAAAAACTGGAAATAATTTTCAATAATACTT-AATAAGTAACATACACCAACCAATAAAGATAGTACAACTGCATT-AAAACTTGACAAATGATGTGAATAAAGTATTTGCAGAAAAGG-------AT----------AAGTCGAAATGGCT----------AAATTCATATCAAAACGAGCAGAATAACATAATCTCATGCTG-TTTCACCT-CCAAGTTAGCAAATAATTTTACAAGTTCTAATCCTCAT i cebCap1.NW_016107695v1 C 0 I 518 s aotNan1.NW_018494782v1 1416510 404 - 1813869 AACCTAGATCAAA-A-GAAGACCTTTAAAGAACCAGACAC--AGATGTGAGAGAATAATAATATTAAATCAAGAT-GTAGAAT--TTTCCCAAGTAAAATCTCAGAAAATAAA--------AAGAGAAATATTTATAAACATTATTTTATAAACAAAAAGTTATATGTTTAAACTTTATAGAGCAAATTAAATTAAAAACAAAAACTGGAAATAACCTTCAATAATACTT-AATAAGTAACACACACCAACCAATAAAAATAGTACAGCTGCATT-AAAACTTGACAAATGATGTG-ATTAAGTATTTGCAGAAAAGG-------AT----------AAGTGGAAATGGCT----------ACATTCATATCAAAATGTGCAGAATAATTTAATCTTATGTTG-TTTCACCT-CCAAGTTAGCAAATAATTTTACAAGTTCTAATCCTCAT i aotNan1.NW_018494782v1 N 0 C 0 s canFam3.chr1 56097408 421 + 122678785 GGTTGAGATCAAA-AGGAAAACCTTTTAAGAATTGGACACATAAATGTGGGAGAATAAGAATCTTAAGTTGAGATAGAAAAA---CTTTGCAAGTATAAATTCAAGAAATAGT--------AAGGTAAATATTGGTCAGTTTAATTTTTTAAACAAAACATTATATATGTAAACTTTATAGAACAAGTTAAGGTGTAAA----AACTGGGAATAATGTTAACTAGTACTTCAATGAGTAACATCTAACAACCAGT-AAGCCAGTAAAATTGCATGAAAAACATGCTAATAAATGTGAGTAAAATATTCAGAAAAAATGGGCATAAAT----------GACTCCATATTGTTAAAAAAATAAAAATCAGGGTCAAATTGCTCTGAAAAATGCAATCTAATACTGCTTTTACCTAT---ATCAGCAAATAATTTAAAAAGTCAAATTCATTGG i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 482146 408 + 760995 GAATAAGATCAAAGA-GAAAACTTTATAAGAATTGGACAT--ATATGTAAGAGACTAATAGTCTTAAATCAAGAT-ATAGAAGAAATTCCCAAGCATACACTCCAGAAATAGAAGAGAAATAAGGGAAATATTGATCGATTTTGTTTTATAAGCAAAAA-TTGCGTACTTAAAGATAATAAAACAAATTAAAATGCAAAC--TAACTGGAAATAATTTTCAAT--------GATAAATGATGCACAATAGCCAATAGACATAATAAAATTACATT-aaaa-tgaacaaatgacatgaataaaatattcacagaaaagg-------acatgaataaaaaactcaaaatggct--aaaaatataaatccttattaaaatgtgaggaatattgtaa--atataatgttttcacctgtcaagtt---------------aagctgtagtcctcat i dasNov3.JH569188 C 0 C 0 e manLeu1.NW_012106474v1 8140510 1715 - 10857215 M a score=116499.000000 s hg38.chr6_KB021644v2_alt 1352 16 + 185823 agccggtgtgcatatg s panTro5.chr6 173455537 16 + 175400573 agccggtgtgcatatg i panTro5.chr6 C 0 C 0 s panPan2.chr6 171719408 16 + 173848474 agccggtgtgcatatg i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11403918 16 - 12463322 agctagtgtgcatatg i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156230841 16 + 157873769 agctggtgtgcatatg i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170257244 16 + 172585720 agctggtgtgcacatg i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169002855 16 - 170955103 atctggtgtgcacatg i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8290114 16 + 10161646 atctggtgtgcacatg i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1319550 16 + 3144229 agctgctgtgcacata i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96598987 16 + 98384682 agctggtgtgcacata i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15537206 16 - 23502949 agctgttgtgcatatg i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169803246 16 + 171630274 GGCGACTGAGCATATG i calJac3.chr4 C 0 C 0 s aotNan1.NW_018494782v1 1416914 16 - 1813869 GGCTGGTGTGCATATG i aotNan1.NW_018494782v1 C 0 I 1264 s canFam3.chr1 56097829 16 + 122678785 AGCTGGTGTGCATATA i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 482554 16 + 760995 agctggtgtgtatata i dasNov3.JH569188 C 0 C 0 e cebCap1.NW_016107695v1 1180498 518 - 2164891 I e manLeu1.NW_012106474v1 8140510 1715 - 10857215 M a score=36139.000000 s hg38.chr6_KB021644v2_alt 1368 14 + 185823 ctgagagaagtcc------t s panTro5.chr6 173455553 15 + 175400573 ctgagagaagtcc-----tt i panTro5.chr6 C 0 C 0 s panPan2.chr6 171719424 14 + 173848474 ctgagagaagtcc------t i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11403934 15 - 12463322 ctgagagaagtcc-----tt i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156230857 15 + 157873769 gtgagagaagtac-----tt i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170257260 20 + 172585720 gtgagacaagtactttactt i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169002871 20 - 170955103 gtgagacaagtactttactt i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8290130 20 + 10161646 gtgagacaagtactttactt i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1319566 20 + 3144229 gtgagacaagtactttactt i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96599003 20 + 98384682 gtgagacaagtactttactt i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15537222 20 - 23502949 gtgagacaaggactttactt i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169803262 13 + 171630274 -TGAGACAAGCTCT------ i calJac3.chr4 C 0 I 907 s canFam3.chr1 56097845 17 + 122678785 TCAAGGCAGGCATTTCT--- i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 482570 14 + 760995 gtgagataggcatt------ i dasNov3.JH569188 C 0 C 0 e aotNan1.NW_018494782v1 1416930 1264 - 1813869 I e cebCap1.NW_016107695v1 1180498 518 - 2164891 I e manLeu1.NW_012106474v1 8140510 1715 - 10857215 M a score=5634.000000 s hg38.chr6_KB021644v2_alt 1382 1 + 185823 t s panTro5.chr6 173455568 1 + 175400573 t i panTro5.chr6 C 0 C 0 s panPan2.chr6 171719438 1 + 173848474 t i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11403949 1 - 12463322 t i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156230872 1 + 157873769 t i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170257280 1 + 172585720 t i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169002891 1 - 170955103 t i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8290150 1 + 10161646 t i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1319586 1 + 3144229 t i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96599023 1 + 98384682 t i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15537242 1 - 23502949 t i colAng1.NW_012114488v1 C 0 C 0 s canFam3.chr1 56097862 1 + 122678785 T i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 482584 1 + 760995 c i dasNov3.JH569188 C 0 C 0 e aotNan1.NW_018494782v1 1416930 1264 - 1813869 I e cebCap1.NW_016107695v1 1180498 518 - 2164891 I e calJac3.chr4 169803275 907 + 171630274 I e manLeu1.NW_012106474v1 8140510 1715 - 10857215 M a score=768942.000000 s hg38.chr6_KB021644v2_alt 1383 90 + 185823 ---ttttttcct-gtggg-aagcttaattgataggaaaataattaattgaaaaataatttgacagtatgtaccaattttctttaaaatagtcata s panTro5.chr6 173455569 90 + 175400573 ---ttttttcct-gtggg-aaacttaattgataggaaaataattaattgaaaaagaatttgacaatatgtactaattttctttaagatagtcata i panTro5.chr6 C 0 C 0 s panPan2.chr6 171719439 90 + 173848474 ---ttttttcct-gtggg-aaacttaattgataggaaaataattaattgaaaaataatttgacaatatgtaccaattttctttaaaatagtcata i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11403950 90 - 12463322 ---ttttttcct-gtggg-aaacttaattgataggaaaataattaattgaaaaataatttgacaatatgtaccaattttctttaaaatagtcata i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156230873 90 + 157873769 ---tttttttct-gtggg-aaacttaattgataggaaaataattaactgaaaaataatttgacaatacgtaccaattttctttaaaatagtcata i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170257281 90 + 172585720 ---ttcttttct-gtggg-aaacttaattgataggaaaataattaattgaaaaacaatttgacaatatgtaccaattttctttaaaatagtcata i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169002892 90 - 170955103 ---ttcttttct-gtggg-aaacttaattgataggaaaataattaattgaaaaacaatttgacaatatgtaccaattttctttaaaatagtcata i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8290151 90 + 10161646 ---ttcttttct-gtggg-aaacttaattgataggaaaataattaattgaaaaacaatttgacaatatgtaccaattttctttaaaatagtcata i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1319587 90 + 3144229 ---ttcttttct-gtggg-aaacttaattgataggaaaataataaattgaaaaataatttgacaatatgtaccaattttctttaaaatagtcata i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96599024 90 + 98384682 ---ttcttttct-gtggg-aaacttaattgataggaaaataattaattgaaaaataatttgacaatatgtaccaattttctttaaaatagtcata i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15537243 90 - 23502949 ---ttcttttct-gtggg-aaacttaattgataggaaaataattaattgaaaaataatttgacaatatgtaccaattttctttaaaatagtcata i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169804182 90 + 171630274 ---TTTATTTCT-GTGGG-AAGCTTAATTGATAGAAAAATATTTAATTGAGAAATAATTTGACAATATGTACCAAGTTTCTTTAAAATTGTCATA i calJac3.chr4 I 907 C 0 s cebCap1.NW_016107695v1 1181016 90 - 2164891 ---TTTTTTTCT-GTGGG-AAGCTTAATTGATAGGAAAATAATTAATTGAAAAATAATTTGACAATACGTACCAATTTTCTTTAAAATCATCATA i cebCap1.NW_016107695v1 I 518 C 0 s aotNan1.NW_018494782v1 1418194 90 - 1813869 ---TTTTTTTCT-GTGGG-AAGCTTAATTGATAGGAAAATAATGAATTGAAAAATAATTTGACAATATGTACCAATTTTCTTTAAAATCGTCATA i aotNan1.NW_018494782v1 I 1264 C 0 s canFam3.chr1 56097863 77 + 122678785 ----CATTTTCT-GGGGGAAAACGTGATTGATATG-----CTCTTTCTGGAAAATAA--------AACGTGCCAATGTCCTTTAAAATAGTGATA i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 482585 89 + 760995 atataattttctaatgga-aaaattagttgatata-----tactttctagaaaactatttgataatatataccaatttcttttaaaatagtccta i dasNov3.JH569188 C 0 C 0 e manLeu1.NW_012106474v1 8140510 1715 - 10857215 M a score=149475.000000 s hg38.chr6_KB021644v2_alt 1473 23 + 185823 ttctgg----ctgggca---cagtggctca s panTro5.chr6 173455659 23 + 175400573 ttctgg----ctgggca---cagtggctca i panTro5.chr6 C 0 C 0 s panPan2.chr6 171719529 23 + 173848474 ttctgg----ctgggca---cagtggctca i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11404040 23 - 12463322 ttctgg----ctgggca---cagtggctca i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156230963 23 + 157873769 ttctgg----ctgggca---cagtggctca i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170257371 23 + 172585720 ttctgg----ctgggta---cagtggctca i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169002982 23 - 170955103 ttctgg----ctgggta---cagtggctca i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8290241 23 + 10161646 ttctgg----ctgggta---cagtggctca i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1319677 23 + 3144229 ttctgg----ctgggta---cagtggctca i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96599114 23 + 98384682 ttctgg----ctgggca---cagtggctca i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15537333 23 - 23502949 ttctgg----ctgggta---cagtggctca i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169804272 11 + 171630274 TTC-------------------gtggctta i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1181106 23 - 2164891 TTCTgg----cttggca---tagtgactca i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1418284 23 - 1813869 TTCTGG----CTTAGCA---TAAtggctca i aotNan1.NW_018494782v1 C 0 C 0 s canFam3.chr1 56097940 30 + 122678785 CTCAgggaacctgggtggctcagtggttga i canFam3.chr1 C 0 I 182 e dasNov3.JH569188 482674 0 + 760995 C e manLeu1.NW_012106474v1 8140510 1715 - 10857215 M a score=1640631.000000 s hg38.chr6_KB021644v2_alt 1496 251 + 185823 cgtctatactcccaacactttgggaggcctaggtgggtgaatccctttagcccaggagttggagaccagcccaggcaacatggcaaaaccctgtctctacaaaaaata--aaaaattagct----------------ggatgtggtggcatgcctgtagtcctggctactcaggaggctggggtgggaggatcgcttgaacccaggaagtcgagactgcagtgagcagtgatcacacc--------------------acggagtgagactctgtctcaaaattttttt s panTro5.chr6 173455682 251 + 175400573 cgtctatactcccaacactttgggaggcctaggtgggtgaatccctttagcccaggagttggagaccagcccgggcaacatggcaagaccctgtctctacaaaaaata--aaaaattagct----------------ggatgtggtggcacgcctgtagtcctggctcctcaggaggctgaggtgggaggatcccttgaacccaggaagtcgagactgcagtgagcagtgatcacacc--------------------acggagtgagactctgtctcaaaattttttt i panTro5.chr6 C 0 C 0 s panPan2.chr6 171719552 251 + 173848474 cgtctatactcccaacactttgggaggcctaggtgggtgaatccctttagcccaggagttggagaccagcccgggcaacatggcaaaaccctgtctctacaaaaaata--aaaaattagct----------------ggatgtggtggcacgcctgtagtcctggctcctcaggaggctgaggtgggaggatcccttgaacccaggaagtcaagactgccgtgagcagtgatcacacc--------------------acggagtgagactctgtctcaaaattttttt i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11404063 250 - 12463322 cgtctatactctcaacactttgggaggcctaggtgggtgaatccctttagcccagga-ttggagaccaggccgggcaacatggcaaaaccctgtctctacaaaaaata--aaaagttagct----------------ggatgtggtggcacgcctgtagtcctggctcctcaggaggctgaggtgggaggatcgcttgaacccaggaagtcaagactgccgtgagcagtgatcgcacc--------------------atggagtgagactctgtctcaaaattttttt i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156230986 251 + 157873769 tgtctatactcccaacactttgggaggcctaggtgggtgaatccctttagcccaggagttcgagaccagcccgggcaacatggcaaaacgctgtctttacaaaaaata--aaaaattagct----------------gggtgtggtggcatgcctgtagtcccagctactcaggaggctgaggtgggaggatagcttgaacccaggaagtcgagactgccgtgagcagtgatcacacc--------------------acggagtgagactctgtctcaaaattttttt i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170257394 268 + 172585720 agtccataatcccaacactttgggaggcccaggtgggtggatccttttagcccaggagttcgagaccagcccgggcaacatggcaaaaccctgtctctataaaaaatac-aaaaattagct----------------gggcgtggtggt--gcctgtagtcctggctactcaggaggctgaggtgagagaattgcttgcacccaggaagtcgagactgcagtgagcagtgatcataccactgcacttcagtctggatgacagagtgagactctgtctcaaaa--ttttt i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169003005 268 - 170955103 agtccataatcccaacactttgggaggcccaggtgggtggatccttttagcccaggagttcgagaccagcccgggcaacatggcaaaaccctgtctctataaaaaatac-aaaaattagct----------------gggcgtggtggt--gcctgtagtcctggctactcaggaggctgaggtgagagaattgcttgcacccaggaagtcgagactgcagtgagcagtgatcataccactgcacttcagtctggatgacagagtgagactctgtctcaaaa--ttttt i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8290264 268 + 10161646 agtccataatcccaacactttgggaggcccaggtgggtgtatccttttagcccaggagttcgagaccagcccgggcaacatggcaaaaccctgtctctataaaaaatac-aaaaattagct----------------gggcgtggtggt--gcctgtagtcctggctactcaggaggctgaggtgagagaattgcttgcacccaggaagtcgagactgcagtgagcagtgatcataccactgcacttcagtctggatgacagagtgagactctgtctcaaaa--ttttt i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1319700 268 + 3144229 agtccataatcccaatactttgggaggcctaggtgggtggatccctttagcacaggagttcgagactagcccgggcaacatggcaaaaccctgtctctataaaaaatac-aaaaattagct----------------gggcgtggtggc--gcctgtagtcctggctactcaggaggctgagatgagagaattgcttgcacccaggaagtcgagacggcagtgagcagtgatcacaccactgcacttcagtctggatgacagagtgagtctctgtctcaaaa--ttttt i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96599137 268 + 98384682 agtccataatcccaacactttgggaggcctaggtgggtggatccctttagcccaggagttcgagactagcccgggcaacatggcaaaaccctgtctctataaaaaatac-aaaaatgagct----------------aggcgtggtggc--gcctgtagtcctggctactcaggaggctgaggtgagagaattgcttgcacccaggaagtcgagactgcagtcagcagtgatcacaccactgcccttcagtctggatgacagagtgagtctctgtctcaaaa--ttttt i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15537356 268 - 23502949 agtccataatcccaacactttgggaggcctaggtgagtggatccctttagcccaggagttcgagaccagcccgggcaacatggcaaaaccctgtgcctataaaaaacac-aaaaattagct----------------gggtgtggtggc--gcctgtagtcctggctactcaggaggctgaggtgagagaattgcttgaacccaggaagtcgagactgcagtgagcagtgatcacaccactacacttcagtctggatgacagagtgagactctgtctcaaaa--ttttt i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169804283 263 + 171630274 tgcctgtaatcccaactctttggggggcccgggtgggtgaatcccttcctctcaggggtttgagacaggcccagacaatatgataaaaccctgtctctacaaaaaatacaaaacattagct----------------cggcacggtggcatgcctgtcgtcctaggtactcaggaggtggagttgggagaatcacttgaacccaggaggctgggactgcagtgaactgtggtcactcc----------attgtggattacagagcgacactctgctcaGGAATTgtttt i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1181129 277 - 2164891 ttcctgtaatcccaacactttgggaggcctgggtggaggaatccatttctctcaggggcttgagacaggccaaggtcatatgataaaaccctgtctc--ccaaatatacaaaaaattagcttggcatggtggcatggtggcatggtggcatgcctgtagtcctggctactcaggaggcagagttgggagaatcacttgaacccaggacgttgagactgcagtgagctgtgatcactcc----------agcctggattacagagtgacattctgccccagaaTTTTTtt i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1418307 262 - 1813869 tgcctgtaatcccaacactttgggcggcctgggtgggtgaatccctttctttccggagtttgagacagtcccaggtaacatgataaaaccctgtctgtacaaaaaatacaaaacattagct----------------tggcatggtggcatgcctgtagtcctggctactcaggaggcggagttgggagaatcgcttgaacccaggaagttgagactgcagtgagctgtgatcactcc----------agtctggattacagagtgacactctgccccagaaTT-TTtt i aotNan1.NW_018494782v1 C 0 C 0 e dasNov3.JH569188 482674 0 + 760995 C e canFam3.chr1 56097970 182 + 122678785 I e manLeu1.NW_012106474v1 8140510 1715 - 10857215 M a score=79306.000000 s hg38.chr6_KB021644v2_alt 1747 11 + 185823 aaaaagtcatt s panTro5.chr6 173455933 11 + 175400573 taaaagtcatt i panTro5.chr6 C 0 C 0 s panPan2.chr6 171719803 11 + 173848474 aaaaagtcatt i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11404313 11 - 12463322 aaaaagtcatt i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156231237 11 + 157873769 aaaaagtcatt i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170257662 11 + 172585720 aaaaagtcatt i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169003273 11 - 170955103 aaaaagtcatt i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8290532 11 + 10161646 aaaaagtcatt i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1319968 11 + 3144229 aaaaagtcatt i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96599405 11 + 98384682 aaaaagtcact i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15537624 11 - 23502949 aaaaagtcatt i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169804546 11 + 171630274 aaaaggtcgtt i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1181406 11 - 2164891 aaaaagttttt i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1418569 11 - 1813869 aaaaagtcatt i aotNan1.NW_018494782v1 C 0 C 0 s canFam3.chr1 56098152 9 + 122678785 aaatagtga-- i canFam3.chr1 I 182 C 0 e dasNov3.JH569188 482674 0 + 760995 C e manLeu1.NW_012106474v1 8140510 1715 - 10857215 M a score=691980.000000 s hg38.chr6_KB021644v2_alt 1758 89 + 185823 ttctttaggctaatcatctcacttttagaaacctatccaaataaaatagtgataaatgaagaaaagtatgagaatacacaaagatattc s panTro5.chr6 173455944 89 + 175400573 ttctttagcctaatcatctcacttttagaaacctatccaaataaaatagtgataaatgaagaaaagtatgagaatacacaaagatattc i panTro5.chr6 C 0 C 0 s panPan2.chr6 171719814 89 + 173848474 ttctttagcctaatcatctcacttttagaaacctatccaaataaaatagtgataaatgaagaaaagtatgagaatacacaaagatattc i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11404324 89 - 12463322 ttctttagcctaatcatctcacttttagaaacctagccaaataaaatagtgataaatgaacaaaagtatgagaatacacaaagatattc i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156231248 89 + 157873769 ttctttagcctaatcatctcacttttagaaacctatccaaataaaatagtgataaatgaagaaaagtatgagaatacacaaagatactc i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170257673 89 + 172585720 ttctttagcttaataatcttacttttagaaacctatccaaataaaatagtgataaatgaagaaaactatgagaatacacaaagatattt i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169003284 89 - 170955103 ttctttagcttaataatcttacttttagaaacctatccaaataaaatagtgataaatgaagaaaactatgagaatacacaaagatattt i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8290543 89 + 10161646 ttctttagcttaataatcttacttttagaaacctatccaaataaaatagtgataaatgaagaaaactatgagaatacacaaagatattt i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1319979 89 + 3144229 ttctttagcttaataatcttacttttagaaacctatccaaataaaatagtgacaaatgaagaaaactatgagaatacacaaagatattt i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96599416 89 + 98384682 ttctttagcttaataatcttacttttagaaacctatccaaataagatagtgataaatgaagaaaactatgagaatacacaaagatattt i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15537635 89 - 23502949 ttctttagcttaataatcttacttttagaaacctatccaaataaaatagtgataaatgaagaaaactgtgagaatacacgaagatattt i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169804557 87 + 171630274 ttctttaatgtgataatttcacttttagaaatctatccaaataaaacagtgataaatgaagaaaactgcgagaatacacagatagtt-- i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1181417 87 - 2164891 ttctttaacatgataatctcacttttagaaatctatccaaataaaatcatgataaatgaagaaaactacgagaatacacggatagat-- i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1418580 83 - 1813869 ttctttaacgtgataatctcacttttagaaatctatccaaataaaatagtgataaatgaagaaaactcgaagaatacac----agtt-- i aotNan1.NW_018494782v1 C 0 C 0 s canFam3.chr1 56098161 79 + 122678785 tactcaactctaatgatcccactcctaggaatctatcccac----------agaaatggagaaaaatatgtgtctgcgctaagatgtgt i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 482674 88 + 760995 ttctttagcttaataatcattcttctaggaaactatccaaaggaaatattgctaaatgaaaaaaaa-atatgtttgcaataagatatat i dasNov3.JH569188 C 0 C 0 e manLeu1.NW_012106474v1 8140510 1715 - 10857215 M a score=3915498.000000 s hg38.chr6_KB021644v2_alt 1847 455 + 185823 attataacattatttataatagaactaattttgagaga-atataaatgcctaaccttaggataatattaaataaattattccattttcatattattggagagagtaaatatt-aaaactgatataaacaaagaacttttaatattgtaggaacattctcatgaacataatagtaagcttaaaaagtcaagatacaaacctatacatgcagtaCAGCCTCATTTATAATAT-TGAACCAAAGAAAAGACATTCACCCAATTATCAACAGCAA--ATAAT--AGAGTCAAGAAGTGTATGCATAATCTTTATTTTCTTCTTTGCTGCTGTGTGGTTTTCTATAAGGAACATTT-TTATGCTTTTAATCAG----AAACACAGGGTGAGAGTGAGAAAGTGCTCTATGAACGTCCAGCGTCAGGCTGGGCATTGGC-------CGCTTCTCAG-------CCCTGGCAGTGCTGGGGG-TGAGCC s panTro5.chr6 173456033 455 + 175400573 attataacattatttataatagaactaattttgagaga-atataaatgcctcaccttaggagaatattaaataaattattccattttcatattattggagagagtaaatatt-gaaactgatataaacaaagaacttttaatattgtaggaacattctcatgaacataatagtaagcttaaaaagtcaagatacaaaactatacatgcagtGCAGCCTCATTTATAATAT-TGAACCAAAGAAAAGACATTCACCCAATTATCAACAGCAA--ATAAT--AGAGTCAAGAAGCATATGCATAATCTTTATTTTCTTCTTTGCTGCTGTGTGGTTTTCTATAAGGAACATTT-TTATGCTTTTAATCAG----AAACACAGGGTGAGAGTGAGAAAGTGCTCTATGAACGTCCAGCGTCAGGCCAGGCGTTGGC-------CACTTCTCAG-------CCCTGGCAGCGCTGGGGG-TGAGCC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171719903 455 + 173848474 actataacattatttataatagaactaattttgagaga-atataaatgcctcaccttaggagaatattaaataaattattccattttcatattattggagagagtaaatatt-gaaactgatataaacaaagaacttttaatattgtaggaacattctcgtgaacataatagtaagcttaaaaagtcaagatacaaaactatacatgcagtGCAGCCTCATTTATAATAT-TGAACCAAAGAAAAGACATTCACCCAATTATCAACAGCAA--ATAAT--AGAGTCAAGAAGCGTATGCGTAATCTTTATTTTCTTCTTTGCTGCTGTGTGGTTTTCTATAAGGAACATTT-TTATGCTTTTAATCAG----AAACGCAGGGTGAGAGTGAGAAAGTGCTGTATGAACGTCCAGCGTCAGGCCGGGCGTTGGC-------CGCTTCTCAG-------CCCTGGCAGCGCTGGGGG-TGAGCC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11404413 455 - 12463322 attataacattatttataatagaactaattttgagaga-atataaatgcctaaccttaggagaatattaaataaattattccattttcatattattggagagagtaaatatt-aaaactgatacatacaaagaacttttaatattgcaggaacattctcatgaacataatagtaagcttaaaaagtcaagatacaaaactatacatgcagtaCACCCTCATTTATAATAT-TGAACCAAAGAAAAGACATTCACCCAATTATCAACAGCAA--ATAAT--AGAGTCAAGAAGCGTATGCATAATCTTTATTTTCTTCTTTGCTGCTGTGTGGTTTTCTATAAGGAACATTT-TTATGCTTTTAATCAG----AAACACAGGGTGAGAGTGAGAAAGTGCTCTATGAACGTCCAGCGTCAGGCCAGGCGTTGGC-------CGCTTCTCAG-------CCCTGGCAGCGCTGGGGG-TGAGCC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156231337 454 + 157873769 attataacattacttataatagaactaattttgagaga-ctataaatgcctaaccttaggagaatattaaataaattgttccgttttcatattactggagagagtaaatatt-aaaactgatacaaacaaagaacttttaatattgtaggaacattctcatgaagataataggaagcttaaaaagtcaagatacaaaactatacatgcagtatagcctcatttATAATAT-TGAACCAAAGAAAAGACACTCAGCC-ATTATCAACAGCAA--ATAAT--GGAGTCAAGAAGTGTATGCGTAATCTTTATTTTCTTCTTTGCTGCTGTGTGCTTTTCTATAAGGAACATTT-TTATGCTTTTAATCAG----AAATGCAGGGTGAGAGTGAGAAAGTGCTCCTTGAACGTCCAGCGTTAGGCCAGGCATTGGC-------CACCTCTCAG-------CCCTGGCAGCGCTGGGGG-TGAGTC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170257762 460 + 172585720 attataatattatttataatataactaattttgagaga-atataaatgcctaaccttaggagaatattaaataaactattctgttttcatattattggagagagt-aacatt-aaagctgatatatacaaagaacttttaatattgtaggaacattctcatgaacataatagtaaggttaaaaagtcaagatacaaaactctacatgcagtatAGGCTCATTTATAATAT-TGAGCTAAAGAAAAGGCATTCACCC-ATTATCAACGGCAA--ATAAT--AGAGTCAGGAAGTGTATGCATAATCTTTATTTTCTTCTTTGCTGCTGTGTGGTTTTCTATAAGGAACATTT-TTGTACTTTTAATCAG----AAACGCAGGGTGAGATTGAGAAAGTGCTGTATGAATGTCCAGCGTCAGGCCAGGCGTTGGG-------CCCTTCTGCATCTCACTCCCTGGCAGCGCTGGGGG-TGAACC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169003373 460 - 170955103 attataatattatttataatataactaattttgagaga-atataaatgcctaaccttaggagaatattaaataaactattctgttttcatattattggagagagt-aacatt-aaagctgatatatacaaagaacttttaatattgtaggaacattctcatgaacataatagtaaggttaaaaagtcaagatacaaaactctacatgcagtatAGGCTCATTTATAATAT-TGAGCTAAAGAAAAGGCATTCACCC-ATTATCAACAGCAA--ATAAT--AGAGTCAGGAAGTGTATGCATAATCTTTATTTTCTTCTTTGCTGCTGTGTGGTTTTCTACAAGGAACATTT-TTGTACTTTTAATCAG----AAACGCAGGGTGAGATTGAGAAAGTGCTGTATGAATGTCCAGCGTCAGGCCAGGCGTTGGG-------CCCTTCTGCATCTCACTCCCTGGCAGCGCTGGGGG-TGAACC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8290632 460 + 10161646 attataatattatttataatataactaattttgagaga-atataaatgcctaaccttaggagaatattaaataaactattctgttttcatattattggagagagt-aacatt-aaagctgacatatacaaagaacttttaatattgtaggaacattctcatgaacataatagtaaggttaaaaagtcaagatacaaaactctacatgcagtatAGGCTCATTTATAATAT-TGAGCTAAAGAAAAGGCATTCACCC-ATTATCAACAGCAA--ATAAT--AGAGTCAGGAAGTGTATGCATAATCTTTATTTTCTTCTTTGCTGCTGTGTGGTTTTCTACAAGGAACATTT-TTGTACTTTTAATCAG----AAACGCAGGGTGAGATTGAGAAAGTGCTGTATGAATGTCCAGCGTCAGGCCAGGCGTTGGG-------CCCTTCTGCATCTCACTCCCTGGCAGCGCTGGGGG-TGAACC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1320068 460 + 3144229 attataatattatttataatataactaattttgagaga-atgtaaatgcctaaccttaggagaatattaaataaactattccgttttcatattattggagagagt-aacatt-aaagctgatatatacaaagaacttttaatattgtaggaacattctcatgaacataatagtaaggttaaaaagtcaagatacaaaactatacatgcagtatagcctcatttATAATAT-TGAGCTAAAGAAAAGGCATTCACCC-ATTATCAACAGCAA--CTAAT--AGAGTCAGGAAGTGTATGCGTAATCTTTATTTTCTTCTTTGCTGCTGTGTGGTTTTCTATAAGGAACATTT-TTGTACTTTTAATCAG----AAACGCAGAGTGAGATTGAGAAAGTGCTGTATGAATGTCCAGCGTCAGGCCAGGCATTGGG-------CCCTTCTGCACCTCACTCCCTGGCAGCGCTGGGGG-TGAGCC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96599505 460 + 98384682 attataacattatttataatataactaattttgagaga-atataaatgcctaaccttaggagaatattaaataaactattctgttttcatattatcagagagagt-aatatt-aaagctgatatatacaaagaaattttaatattgtaggaacattctcatgaacataatagtaaggttaaaaagtcaagatacaaaactatacatgcagtatAGCCTCGTTTATAATAC-TGAGCTAAAGAAAAGGCATTCACCC-ATGATCAACAGCAA--CTAAT--AGAGTCAGGAAGTGTATGCGTAATCTTTATTTTCTTCTTTGCTGCTGTGTGGTTTTCTGTAAGGAACATTT-TTATGCTTTTAATCAG----AAACGCAGGGTGAGAGTGAGAAAGTGCTGTATGAATGTCCAGCGTCAGGCCAGGCGTTGGG-------CCCTTCTGCACCTCACTCCCTGGCAGTGCTAGGGG-TGAGCC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8142226 460 - 10857215 attataatattatttataatataactaattttgagaga-atgtaaatgcctaaccttaggagaatattaaataaactattccgttttcatattatcggagagagt-aacatt-aaagctgatatatacaaaaaactttcaatattgtaggaacattctcatgaacataatagtaaggttaaaaagtcaagatacaaaactatacatgcagtatagcctcatttATAATAT-TGAGCTAAAGAAAAGGCATTAACCC-ATTATCAACAGCAA--CTAAT--AGAGTCAGGAAGTGTATGCATAATCTTTATTTTCTTCTTTGCTGCTGTGTGGTTTTCTATAAGGAACATTT-TTGTACTTTTAATCAG----AAACGCAGGGTGAGATTGAGAAAGTGCTGTATGAATGTCCAGCGTCAGGCCAGGACGCGGC-------ACCTTCTGCACCTCACTCCCTGGCAGCGCTGAGGA-TGAGCC i manLeu1.NW_012106474v1 M 1715 C 0 s colAng1.NW_012114488v1 15537724 460 - 23502949 attatagtattatttataatataactaattttgagaga-atataaatgcctaaccttaggagaatattaaataaactattcccttttcatattactggagagagt-aatatt-aaagctgatatatacaaagaacttttaatattgtaggaacattctcatgaacataacagtaaggttaaaaagtcaagatacaaaactatacatgcagtatagcctcatttataatat-tgagctaaataaaaggcattcaccc-attatcaacagcaa--ataat--agagtcaggaagtgtatgcgtaatctttattttcttttttgctgttgtgtggttttctataaggaacattt-ttgtacttttaatcag----aaaCGCAGGGTGAGATTGAGAAAGTGCTGTATGAATGTCCAGCGTCAGGCTAGGCGTTGGG-------CCCTTCTACATCTCACTCCCTGGCAGCGCTGGGGG-TGAGCC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169804644 411 + 171630274 attataatattatgtatcatagaattaatttcaaaaga-atgtaaatgcctaaccttaggagaatattaaagaaattattccattttcatattattggagagtgtaaatatt-aaagctgatacatacgaaaaccttttcatattgtggaaacattctcatgaacataatattaagtctcagaagtcaagatacagaactatgcatgcagGTTAGCCTTATTTATGACAT-TGAACTGAAGACAAGACATTCACCC-ATTATCAACAGAAA--ATCAT--AGAGTCAGGAAGTGCATGCACAATCTTTCTTTTCTCCTTTGCTCTGGTGTGGTTTTCTGTAAGGAACA----------TTTTAATCAG----AAAAGCAGGGTAGGAGTGAGAGAGTGCTGTATGAACA------------------------------------------------CCCTGGAAGTGCTGGGTG-TGAGCC i calJac3.chr4 C 0 I 1 s cebCap1.NW_016107695v1 1181504 454 - 2164891 attataatattatgtatcatagaattaatttcaaaaga-atgtaaatgcctaaccttaagagaatattaaagaaattattccattttcatattattatagagagtaagtatt-aaagctgatacatacaaaaaacttttgatattgtagaaacattcgcatgaacatgatattaagtctaagaagtcaagatacaaaactatacttgcagtatacccttatttATGATAT-TGAACTGAAGAGAAGACATTCACCC-ATTATCACCAGAAA--ATAAT--AGAGTCCAGAAGTGCGTGCACAATCTTCCTTTCCTCCTTTGCTGCTGTGTGGTTTTCTGTAAGGAACATTT-TTACGCTTTTAATCAG----ATAAGCAGGGTAGGAGTGAGAAAGTGCTGTATGAACGTCTGGTGTCGGGTGAGGTGTCGGC-------CGCTTCCCAT-------CCCTGGAAGTGCTGGGTG-TGAGCC i cebCap1.NW_016107695v1 C 0 I 1 s aotNan1.NW_018494782v1 1418663 454 - 1813869 attataatattctgtatcacagaatcaatttcaaaaga-atgtaaatgcctaaccttaggagaatattaaagaaattattccattttcatattactggagagagttaatatt-aaagctgatatatacaaaaaacttgtgatattgtagaaacattctcatgaacataatattaagtctaagaagtcaagatacaaaactctacatgcagtatAGCCTTATTTATGACGC-TGAACTGAAGAGAAGACGTTCACCC-ATTATCAACAGAAA--ATAAT--AGCGTCAAGAAGTGCATGCACAATCTTTCTTTTCTCCTTTGCTGTTGTGTGGTTTTCTGTAAGGAACATTT-TTACGCTTTTAATCAG----AAAAGCAGGGTAGGAGTGAGAAAGTGCTGTATGAACGTCTGATGTCGGCCGAGGAGTTGGC-------CGCTTCCCCG-------CCCTGGAAGTGCTGGGTG-TGAGCC i aotNan1.NW_018494782v1 C 0 I 10 s canFam3.chr1 56098240 375 + 122678785 gttagaacattatttacaatagagctaatttgtaaagacctatgaatgctgcacatcaggagaatgttatgtgaactttacggtatttatgttatggaagagtgtaaatatc-aaaactgatatgtacgaaTAAGTCTTCACATTGTAGG----TTCTCATGAACGTCAGGGTGAG-TGAAACAGTAAAGAAACAGAGTTGTGCACGCAG------CTCTCCTGTGACGT-TGAACTAAAGGAAGGAAATCCACCA-AATATTAACAGTAATTTTATC--AGAGT--GGAATTTGGCACA-AATCTTTGTTGTGCTCTTCACTCTTGTTTGG------------------------GTCATTACTCAG----AAAACTAGTTTAGAGATCAGAAA--ACTGTATGTCCGTTT---------------------------------------------CCCTGGCACAGT------------- i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 482762 454 + 760995 attagaacattatttataatagaagtg----tgaaagg-tgatacattcctaactttaggagaatattgaataaattatactttgttcatattatagaagagtgtaaatattaaaagtttatggtaacaaagtgtttttaataatgtagcaacatttttattaatataataataagt-----------aaatccatcaggatacatgcagtatggcctcatttatgaaatctgaagaaaagggaagagattcacca-aatattaacaggca--ttgtttcagaacagtggaatttatgggtgatctctattttcttctttaatcttttttggttttctataaaaagtattcgttatgtttttcatcagaacaaaaCATATTTTAATAATTAAAAAACA----AGGTACATATTGCTTCATGTAGGATATGTGCTTTGAATTGCTTCTCAATC-----AAATGGAATTACAGTGTGCTAAGCC i dasNov3.JH569188 C 0 C 0 a score=39893.000000 s hg38.chr6_KB021644v2_alt 2302 7 + 185823 GCGGGCT s panTro5.chr6 173456488 7 + 175400573 GCGGGCT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171720358 7 + 173848474 GCGGGCT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11404868 7 - 12463322 GCGGGCT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156231791 7 + 157873769 GCGGGCT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170258222 7 + 172585720 ACAGGCT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169003833 7 - 170955103 ACAGGCT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8291092 7 + 10161646 ACAGGCT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1320528 7 + 3144229 ACGGGCT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96599965 7 + 98384682 ACGGGCT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8142686 7 - 10857215 ACGGGCT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15538184 7 - 23502949 CCGGGCT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169805056 4 + 171630274 ---GCCT i calJac3.chr4 I 1 I 5 s cebCap1.NW_016107695v1 1181959 4 - 2164891 ---GCCT i cebCap1.NW_016107695v1 I 1 I 6 s dasNov3.JH569188 483216 4 + 760995 ---AGCT i dasNov3.JH569188 C 0 C 0 e aotNan1.NW_018494782v1 1419117 10 - 1813869 I e canFam3.chr1 56098615 0 + 122678785 C a score=281487.000000 s hg38.chr6_KB021644v2_alt 2309 34 + 185823 CCGGCCTCCACTTTCTCTGACAAATGCCTTAGTG s panTro5.chr6 173456495 34 + 175400573 CCGGCCTCCGCTTTCTCTGACAAATGCCTTAGTG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171720365 34 + 173848474 CCGGCCTCCGCTTTCTCTGACAAATGCCTTAGTG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11404875 34 - 12463322 CCGGCCTCCGCTTTCTCTGACAAATGCCTTAGTG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156231798 34 + 157873769 GTGGCCTCCACTTTCTCTGACAAATGCCTTAGTG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170258229 34 + 172585720 CTGGCCTCCACATTCTCTGACAGATGCCTTAGTG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169003840 34 - 170955103 CTGGCCTCCACATTCTCTGACAGATGCCTTAGTG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8291099 34 + 10161646 CTGGCCTCCACATTCTCTGACAGATGCCTTAGTG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1320535 34 + 3144229 CTGGCCTCCACATTCTCTGACAGATGCCTTAGTG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96599972 34 + 98384682 CTGGCCTCCACATTCTCTGACAGATGACTTAGTG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8142693 34 - 10857215 CTGGCCTCCACATTCTCTGACAGATGCCTTAGTG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15538191 34 - 23502949 CTGGCCTCCACATTCTCTGACAGATACCTTAGGG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169805065 33 + 171630274 -CCGCCTCCACCTGCCCTGACAAACGCCTTAGTT i calJac3.chr4 I 5 C 0 s cebCap1.NW_016107695v1 1181969 33 - 2164891 -CTGCCTCCACGTGCTCTGACAAATGCCTTAGTT i cebCap1.NW_016107695v1 I 6 C 0 s aotNan1.NW_018494782v1 1419127 34 - 1813869 TCTGCCTCCACCTGCTCTGACAAACGCCTTAATT i aotNan1.NW_018494782v1 I 10 C 0 s canFam3.chr1 56098615 24 + 122678785 ---GCCTTC-------CCGACGCATGTCTGAGTC i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 483220 31 + 760995 ---GTGCTCTCCTATTCTGGCAAAGACCTTAGTT i dasNov3.JH569188 C 0 C 0 a score=31005.000000 s hg38.chr6_KB021644v2_alt 2343 3 + 185823 ACt s panTro5.chr6 173456529 3 + 175400573 ACt i panTro5.chr6 C 0 C 0 s panPan2.chr6 171720399 3 + 173848474 ACt i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11404909 3 - 12463322 ACt i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156231832 3 + 157873769 ACt i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170258263 3 + 172585720 ACC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169003874 3 - 170955103 ACC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8291133 3 + 10161646 ACC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1320569 3 + 3144229 ACC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96600006 3 + 98384682 ACC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8142727 3 - 10857215 ACt i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15538225 3 - 23502949 ACT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169805098 3 + 171630274 ACT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1230065 3 - 2905041 ATt i saiBol1.JH378287 N 0 C 0 s cebCap1.NW_016107695v1 1182002 3 - 2164891 ACt i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1419161 3 - 1813869 ACt i aotNan1.NW_018494782v1 C 0 C 0 s canFam3.chr1 56098639 3 + 122678785 GCT i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 483251 3 + 760995 ACT i dasNov3.JH569188 C 0 C 0 a score=1023536.000000 s hg38.chr6_KB021644v2_alt 2346 120 + 185823 gccatgagctgcattgtgcccccc---aaaatttatg--------ttgacaccccag----------cctccagtgtttcaaagtgtgact-tatttgaagaccaag-cctcacgtagatgattacgttaaaacaaggtcctt s panTro5.chr6 173456532 120 + 175400573 gccatgagctgcattgtgcccccc---aaaatttatg--------ttgacaccccag----------cctccagtgtttcaaagtgtgact-tatttgaagaccaag-cctcacgtagatgattaagttaaaacaaggtcctt i panTro5.chr6 C 0 I 372 s panPan2.chr6 171720402 120 + 173848474 gccatgagctgcattgtgcccccc---aaaatttatg--------ttgacaccccag----------cctccagtgtttcaaagtgtgact-tatttgaagaccaag-cctcacgtagatgattaagttaaaacaaggtcctt i panPan2.chr6 C 0 I 370 s gorGor5.CYUI01015032v1 11404912 120 - 12463322 gccatgagctgcattgtgtccccc---aaaatttatg--------ttgacaccccag----------cctccagtgtttcaaagtgtgact-tatttgaagaccaag-cctcacgtagatgattaagttaaaacaaggtcctt i gorGor5.CYUI01015032v1 C 0 I 364 s nomLeu3.chr3 156231835 120 + 157873769 gccatgagctgcactgtgcccccc---aaaatttatg--------ttgacaccccag----------cccccagtgtttcaaaatgtgact-tatttggagaccaag-tctcatgtagatgattaagttaaaacaaggtcctt i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170258266 131 + 172585720 GCCatgagctgcattgtgccccccac-caaatttatgttgatgccttgataccccaa---------ccccccagtgcttcaaaatgtgact-tatttggaaaccaag-cttcccgtggatgattaagttaaaatgaggtcctg i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169003877 131 - 170955103 GCCatgagctgcattgtgccccccac-caaatttatgttgatgccttgataccccaa---------ccccccagtgcttcaaaatgtgact-tatttggaaaccaag-cttcccgtggatgattaagttaaaatgaggtcctg i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8291136 131 + 10161646 GCCatgagctgcattgtgccccccac-caaatttatgttgatgccttgataccccaa---------ccccccagtgcttcaaaatgtgact-tatttggaaaccaag-cttcccgtggatgattaagttaaaatgaggtcctg i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1320572 130 + 3144229 GCCatgagctgcattgtgccccccac-caaatttatgttgatgccttgataccccaa----------cccccagtgcttcaaaatgtgact-tatttggaaaccaag-cctcccatggatgattaagttaaaatgaggtcctg i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96600009 131 + 98384682 GCCatgagctgcactgtgccccctccgcaaatttatgttgatgccttgataccccaa----------cccccagtgcttcaaaatgtgact-tatttggaaaccaag-cctcccgtggatgattaagttaaaatgaggtcctg i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8142730 130 - 10857215 gccatgagctgcattgtgccccccac-caaatttatgttggtgccttgataccccaa----------cccccagtgcttcaaaatgtgact-tatttggaaaccaag-cctcccatggatgattaagttaaaatgaggtcctg i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15538228 129 - 23502949 GCCGtgagctgcattgtgccccct-c-caaatttatgttgatgccttgataccccaa----------tccccagtgcttcaaaatgtgact-tatttggagaccaag-cctcccgtggatgattaagttaaaatgaggtcctg i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169805101 121 + 171630274 GCCCtgagctgcactgtgcccccc---aagatttatg--------ttgatgccccaa---------cccccccgtgattcaaagtgtgact-tattcagagagcaga-cctcacataagcaattaagttcaaatgaggccctt i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1230068 130 - 2905041 gccatgagctgcactgtgcccccc---aagatttatg--------ttgacgccccaaccaccgccccccacccgtgattcaaagtgtgact-tattcggagagcaga-cctcacataggcaattaagttcaaatgaggccctt i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1182005 121 - 2164891 gccatgagctgcactgtgcccccc---aagatttatg--------ttgatgccccaa--------ccccccccgtgattcaaagtgtgact-tattcggagggcaga-cctca-ataagcaattaagttcaaatgaggccctt i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1419164 121 - 1813869 gccatgagctgcactgcgctcccc---aagatttatg--------ttgacacccaaa---------cccccccgtgattcaaagtgtgact-tattcggagagcaga-cctcacataggcagtcaagttcaaatgaggccctt i aotNan1.NW_018494782v1 C 0 C 0 s canFam3.chr1 56098642 120 + 122678785 TCTCTGGACCAGACTGTTccc------aaaactcagc------cattgaagcaccat----------ctccgaatacctctgtatgtgaccatatgtggagagaaggtctttacagaggagatgaaatc-aaacggggtcctt i canFam3.chr1 C 0 C 0 e dasNov3.JH569188 483254 0 + 760995 C a score=57224.000000 s hg38.chr6_KB021644v2_alt 2466 9 + 185823 tgagtgggt s nomLeu3.chr3 156231955 9 + 157873769 cgagtgggt i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170258397 9 + 172585720 caagtaggt i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169004008 9 - 170955103 caagtaggt i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8291267 9 + 10161646 caagtaggt i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1320702 9 + 3144229 caagtaggt i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96600140 9 + 98384682 caagtaggt i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8142860 9 - 10857215 caagtaggt i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15538357 9 - 23502949 caagtaggt i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169805222 9 + 171630274 cgagtgggt i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1230198 9 - 2905041 cgagtgggt i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1182126 9 - 2164891 cgagtgggt i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1419285 9 - 1813869 cgagtgggt i aotNan1.NW_018494782v1 C 0 C 0 s canFam3.chr1 56098762 9 + 122678785 caagtaccc i canFam3.chr1 C 0 C 0 e dasNov3.JH569188 483254 0 + 760995 C e gorGor5.CYUI01015032v1 11405032 364 - 12463322 I e panPan2.chr6 171720522 370 + 173848474 I e panTro5.chr6 173456652 372 + 175400573 I a score=32094.000000 s hg38.chr6_KB021644v2_alt 2475 4 + 185823 gcca s gorGor5.CYUI01015032v1 11405396 4 - 12463322 Gcca i gorGor5.CYUI01015032v1 I 364 C 0 s nomLeu3.chr3 156231964 4 + 157873769 gcca i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170258406 4 + 172585720 gcca i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169004017 4 - 170955103 gcca i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8291276 4 + 10161646 gcca i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1320711 4 + 3144229 gcca i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96600149 4 + 98384682 gcca i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8142869 4 - 10857215 gcca i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15538366 4 - 23502949 gcca i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169805231 4 + 171630274 gccc i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1230207 4 - 2905041 gccg i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1182135 4 - 2164891 gcca i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1419294 4 - 1813869 gccg i aotNan1.NW_018494782v1 C 0 C 0 s canFam3.chr1 56098771 4 + 122678785 ccca i canFam3.chr1 C 0 C 0 e dasNov3.JH569188 483254 0 + 760995 C e panPan2.chr6 171720522 370 + 173848474 I e panTro5.chr6 173456652 372 + 175400573 I a score=2246104.000000 s hg38.chr6_KB021644v2_alt 2479 252 + 185823 atccaatctgactggtgtccttatcagaagcggagattaggatgcacagagagaccctggattcatgtgcaccgagggatgaccatgggaaggcacagcacgaaggcaccatctgcaagccaag--gagaaccccctggaaaa---ccaacctgcccacacccaggtctcagcctccagcc-------tccgtg------------------tctgtggttaaaccatgcagtctgtggtgcttgtcaaggcagccctggcCGACC--GACGGTTTCTGTGATT s panTro5.chr6 173457024 252 + 175400573 atccaatctcaccggtgtccttatcagaagcggagattaggatgcacagagagaccctggattcacgtgcaccgagggatgaccatgggaaggcacagcacgaaggcaccatctgcaagccaag--gagaagcccctggaaaa---ccaacctgcccacacccaggtctcggcctccagcc-------tccatg------------------tctgtggttaaaccatgcagtccgtggtgcttgtcaaggcagccctggcCGACC--GACGGTTTCTGTGATT i panTro5.chr6 I 372 C 0 s panPan2.chr6 171720892 252 + 173848474 atccaatctcactggtgtccttatcagaagcggagattaggatgcacagagagaccctggattcacgtgcaccgagggatgaccatgggaaggcacagcacgaaggcaccatctgcaagccaag--gagaagcccctggaaaa---ccaacctgcccacacccaggtctcggcctccagcc-------tccatg------------------tctgtggttaaaccatgcagtccgtggtgcttgtcaaggcagccctggcCGACC--GACGGTTTCTGTGATT i panPan2.chr6 I 370 C 0 s gorGor5.CYUI01015032v1 11405400 252 - 12463322 atccaatctcactggtgtccttatcagaagcggagattaggatgcacagagataccctggattcacgtgcaccgagggatgaccacgggaaggcacagtgtgaaggcaccgtctgcaagccaag--gagaagcccctggaaaa---ccaacctgcccacacccagggctcggcctccagcc-------tccatg------------------tctgtggttaaaccatgcagtctgtggtgcttgtcaaggcagccctggcCGACC--GACGGTTTCTGTGATT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156231968 254 + 157873769 atccaatctgactgctgtccttatcagaagcagagattaggatgcacagagagaccctggattcacgtgcaccgagggatgaccacgggaaggcacaacttgaaggcaccgtctgcaagccaaggagagaggcccctggaaaa---ccaacctgcccacacccaggtctcggcctccagcc-------tccatg------------------tctgtggttcaaccatgcagtctgtggtgcttgtcaaggcagccctggccgact--gaCGGTTTCTGTGATT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170258410 260 + 172585720 atccaatctgactggtgtccttatcagacgcggagattaggacacgcagagagaccctggattcacgtgcact-ggggatgaccacaggaaggcaccgcgcgaaggcaccgtctgcaagccaaggagagaggcccccggaaaa---ccaacctgcccacacccaggtctcggcctccagcctccagcttccatg------------------tctgtggttaaaccatgtagtctgcggtgcttgtcaaggcagctctggccgact--gaCGGTTTCTGTGATT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169004021 260 - 170955103 atccaatctgactggtgtccttatcagacgcggagattaggacaggcagagagaccctggattcacgtgcact-agggatgaccacaggaaggcaccgcgcgaaggcaccgtctgcaagccaaggagagaggcccccggaaaa---ccaacctgcccacacccaggtctcggcctccagcctccagcttccatg------------------tctgtggttaaaccatgtagtctgcggtgcttgtcaaggcagctctggccgact--gaCGGTTTCTGTGATT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8291280 260 + 10161646 atccaatctgactggtgtccttatcagacgcggagattaggacaggcagagagaccctggattcacgtgcact-agggatgaccacaggaaggcaccgcgcgaaggcaccgtctgcaagccaaggagagaggcccccggaaaa---ccaacctgcccacacccaggtctcggcctccagcctccagcttccatg------------------tctgtggttaaaccatgtagtctgcggtgcttgtcaaggcagctctggccgact--gaCGGTTTCTGTGATT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1320715 259 + 3144229 atccaatctgactggtgtccttatcagacgtggagattaggacacgcagagagaccctggattcacgtgcact-agggatgaccacaagaaggcaccgcgcgaaggcaccatctgcaagccaaggagagaggcccacagaaaa---ccaacct-cccacacccaggtctcggcctccagcctccagcttccatg------------------tctgtggttaaaccatgtagtctgcggtgcttgtcaaggcagctctggccgact--gaCGGTTTCTGTGATT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96600153 259 + 98384682 atccaatctgactggtgtccttatcagaagcggagattaggacacacagagagaccctggattcacgtgcact-agggatgaccacaggaaggcaccgcccgaaggcaccgtctgcaagccgaggagagaggcccacagaaaa---ccaacct-cccacacccaggtctaggcctccagcctccagcttccatg------------------tctgtagttaaaccatgtagtctgtggtgcttgtcaaggcagctctggccgact--gacaGTTTCTGTGATT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8142873 260 - 10857215 atccaatctgactggtgtccttatcagaagcggagattaggacacgcagagagaccctggattcacgtgcact-agggatgaccacaagaaggcaccgcgcgaaggcaccatctgcaagccaaggagagaggcccacagaaaa---ccaacctgcccacacccaggtctcggcctccagcctccagcttccatg------------------tctgtggttaaaccatgtagtctgcggtgcttgtcaaggcagctctggccgact--gaCGGTTTCTGTGATT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15538370 259 - 23502949 atccagtctgactggtgtccttatcagaagcggagattaggacacacagagagaccctggattcacgtgcact-agagatgaccacaggaaggcactgtgcgaaggcaccgtctgcaaaccagggagagaggcccccggaaaa---ccagcct-gtcacacccaggtctcggcctccagcctccagcttccatg------------------tctgtggttaaaccatgtagtctgtggtgcttgtcaaggcagctctggccgact--gaCGGTTTCTGTGATT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169805235 242 + 171630274 gtccagtctgactggtgtcctcatcagcagtggagattaggacgcagggagaggccgtggattcacgtgcacagagggatgacca------------gcatgaaggtgccatgtgcaagcccaggagagaggcccccaaaaag---cccatctgcccacacccaggtcttggcctccagcc-------tccacg------------------tctgtggttaaagcatgcagtctgcagtgcttgtcagggcggccctgccagact--CACAGGTCCTGTTTTT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1230211 240 - 2905041 gtccagtccgactggtgtccttatcagaagcggagattaggtcgcagggagaggccctgggttcacgcgcacagagggatgagca------------gcatgaaggtgccatccgcaagcccaggacagaggccccc-aaaag---tctacctgcccacacccagggcttggcctccagcc-------tccacg------------------tctgtggttaaaccgtgcggtctgtggtgcttgtcagggcggccctggT-GACT--CATGGGTCCTGTTTTT i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1182139 241 - 2164891 gtccagcctgactggtgtccttgtcagaagcggagattaggacgcagggagaggccccggattcacgtgcacagagggatgacca------------gcatgaaggtgccatccgcaagcccaggagagaggccccc-gaaag---cccacctgcccacacccaggtcttggcctccagcc-------tccacg------------------tctgtggttaaaccgtgcagtctgtggtgcttgtcagggcggccctggctgact--catGGGTCCTGTTTTT i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1419298 239 - 1813869 gtctagtctgactggtgtccttatcagaagcggggattaggatgca-ggagaggccctggattcaggtgcacagagggatgacca------------gcatgaa-gtgccatctgcaggcccaggagagaggccccc-aaaag---cccacctgcccacacccaggtcttggcctccagcc-------tccacg------------------tctgtggttaaaccgtgcagtctgtggtgcttgtcagggcggccctGCCTGACT--CATGGGTCCTGTTTTT i aotNan1.NW_018494782v1 C 0 C 0 s canFam3.chr1 56098775 240 + 122678785 acctggtatactgggtgtccctgtgggaagaggcgcttag----------------------------------atggaaggccccacaaagtctcagggagcaagcaatgtctgtgcagctgg--gagagcccctcgggaaagaccagccctgcccacgcctggatctcagactccagat-------tccaggaacgtgagcgaacaaacatctgGAGGTGAAGTGGACTGTCTGCATTGTCTGTCCTGGTGGCCCAAGCGGAGTAGGACGGTTACTGTG-CT i canFam3.chr1 C 0 C 0 e dasNov3.JH569188 483254 0 + 760995 C a score=1880701.000000 s hg38.chr6_KB021644v2_alt 2731 215 + 185823 GGAATTGCTGCCTGTAAATATGAGTGAGAGCCCAGCCGATAGAGATGCATGAGGCCTGCAGAAGCTTGGCACATCG--ATGGTGCGGTGGCAGAGGTGGTGAGGGTGTTAGCCAGGAACGTGGTCTGCAAGGCAATATTCCTTCGCAAGGCGGGTATTAGAAAAAAGACTGTGCAAGTTGATGTCTACACACAGTGCTGAGCACCTTCA-CGCTGATG s panTro5.chr6 173457276 213 + 175400573 GGAATTGCTGCCTGTAAATATGAGTGAGAGCCCAGCCGATAGAGATGCATGAGGCCTGC-GAAGCTTGGCACATCG--ATGGTGCGGTGGC-GAGGTGGTGAGGGTGTTAGCCAGGAACGTGGTCTGCAAGGCAATATTCCTTCATGAGGAGGGTATTAGAAAAAAGACTGTGCAAGTTTATGTCTACACACAGTGCTGAACATCTTCA-CACTGATG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171721144 214 + 173848474 GGAATTGCTGCCTGTAAATATGAGTGAGAGCCCAGCCGATAGAGATGCATGAGGCCTGCAGAAGCTTGGCACATCG--ATGGTGCGGTGGC-GAGGTGGTGAGGGTGTTAGCCAGGAACGTGGTCTGCAAGGCAATATTCCTTCATGAGGAGGGTATTAGAAAAAAGACTGTGCAAGTTTATGTCTACACACAGTGCTGAACATCTTCA-CACTGATG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11405652 215 - 12463322 GGAATTGCTGCCTGTAAATATGAGTGAGAGCCCAGCCGATAGAGATGCATGAGGCCTGCAGAAGCTTGGCACATCG--ATGGTGCGGTGGCGGAGGTGGTGAGGGTGTTAGCCAGGAACGTAGTCTGCAAGGCAATATTCCTTCACGAGGGGGGTATTAGAAAAAAGACTGTGCAAGTTTATGCATACACACAATGCTGAACATCTTCA-CACTGATG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156232222 215 + 157873769 GGAATTGCTGCCTGTAAATATGAGTGAGAGCCCAGCCGATAGAGATGCATGAGGCCTGCAGAAGCTTGACACATCA--ATGGTGCGGTGGCGGAGGTGGTGAGGGTGTGAGCCAGGAACGTGGTCTGCAGGGCAATATTCCCTCACGAGGAGGGTATTAGAAAAAAGACTGTGCAAGTTTACATATACACACAATGCTGAACATCTTCA-CACTGATG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170258670 215 + 172585720 GGAACTGCTGCCTGTAAATATGAGTGAGAGCCCAGCCGATAGAGATGCATGAGGCCTGCCAAAGCCTGGCGCATCA--ATGGTGCCCTGGCGGAGGTGGTGAGGGTGTTAGCCAGGAACGCAGTCTGCAAGGCAATATTCCTTCGCGAGGGGGGTATTAGAAAAAAGACCGTGCAAGTTCACATGCACACGCAATGCTGAACATCTTCA-CACTGATG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169004281 215 - 170955103 GGAACTGCTGCCTGTAAATATGAGTGAGAGCCCAGCCGATAGAGATGCATGAGGCCTGCCAAAGCCTGGCGCATCA--ATGGTGCCCTGGCGGAGGTGGTGAGGGTGTTAGCCAGGAACGCAGTCTGCAAGGCAATATTCCTTCGCGAGGGGGGTATTAGAAAAAAGACCGTGCAAGTTCACATGCACACGCAATGCTGAACATCTTCA-CACTGATG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8291540 215 + 10161646 GGAACTGCTGCCTGTAAATATGAGTGAGAGCCCAGCCGATAGAGATGCATGAGGCCTGCCAAAGCCTGGCGCATCA--ATGGTGCCCTGGCGGAGGTGGTGAGGGTGTTAGCCAGGAACGCAGTCTGCAAGGCAATATTCCTTCGCGAGGGGGGTATTAGAAAAAAGACCGTGCAAGTTCACATGCACACGCAATGCTGAACATCTTCA-CACTGATG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1320974 215 + 3144229 GGAACTGCTGCCTGTAAATATGAGTGAGAGCCCAGCCGATAGAGATGCATGAGGCCTGCCGAAGCTTGGCGTATCA--ATGGTGCGGTGGTGGAGGTGGTGAGGGTGTTAGCCAGGAACGCGGTCTGCAAGGCAATAGTCCTTAGCGAGGCGGGTATTAGAAAAAAGACCGTGCAAGTTCACATGCACATGCGATGCTGAACATCTTCA-CCCTGATG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96600412 215 + 98384682 GGAATCGCTGCCTGTAAATATGAGTGAGAGCCCAGCCGATAGAGATGCATGAGGCCTGCTTAAGCTTGGCGCATCA--ATGGTGCCGTGGCGGAGGTGGTGAGGGTGTTAGCCAGGAACGCAGTCTGCAAGGCAATAGTCCTTAGCGAGGGGGGTATTAGAAAAAAGACTGTGCAAGTTCACATATGCACACAATGCTGAACATCTTCA-AACTGATG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8143133 215 - 10857215 GGAACTGCTGCCTGTAAATATGAGTGAGAGCCCAGCCGATAGAGATGCATGAGGCCTGCCGAAGCTTGGCGCATCA--ATGGTGCCATGGCGGAGGTGGTGAGGGTGTTAGCCAGGAACGCAGTCTGCAAGGCAATAGTCCTTCGCGAGGGGGGTATTAGAAAAAAGACCGTGCAAGTTCACATGCACACGCAATGCTGAACATCTTCA-CCCTGATG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15538629 215 - 23502949 GGAATTGCTGCCTGTAAATATGAGTGAGAGCCCAGCCGATAGAGATGCATGAGGCCTGCCGAAGCTTGGCGCATCA--ATGGTGCGGTGGTGGAGGTGGTGAGGGTGTTAGCCAGGAAAGCAGTCTGCAAGGCAATATTCCTTAGGGAGGAGGGTATTAGAAAAAAGACCGTGCAAGTTCACATATACACGCGATGCTGAACATCTTCA-TACTGATG i colAng1.NW_012114488v1 C 0 I 308 s calJac3.chr4 169805477 212 + 171630274 GGAATTGCTGCCCGTAAATTTGAGTGAGAGTCCAGGCAAAAGACCTGCACGAGGCCTGCGGAAGCTTGGCCCATGG--ATGGTGTGCTGGCGGA--TGGTGAACGTGCCAGCCGGGAACGCTGTCTGGAAGGCAATATTCCTTCACGAGG-GGGTGTTAGAAATGGAACTGTGCACGTTGACATATACATGCAATGCCCAGCATCCTCA-CACTGGTA i calJac3.chr4 C 0 I 2 s saiBol1.JH378287 1230451 200 - 2905041 GGAATTGCTACCCGTAAATTTGAGTGAGAGTCCAGGCGAAAGACCTGCA-----------GAAGCTGGGCGCGCGG--ATGGTGTGCTGGCGGA--TGCTG-ACGTGTTAGTCGGGAACGCTGTTTGGAAGGCGATATTCCTTCACGAGG-GAGTACTAGAAATAGAAGTGTGCAAGTTGACATATACATGCAATGCCCAGCATCCTCA-CACTGGTA i saiBol1.JH378287 C 0 I 342 s cebCap1.NW_016107695v1 1182380 212 - 2164891 GGAAGTGCTGCCTGTAAATTTGAGTGAGAGTCCAGGCGAAAGACCTGCACAAGGCCTGCGGAAGCTTGGCGCATGG--ATGGTGTGCTGCTGGA--TGGTGAACGTGTTAGCTGGGAATGCTGTCTGGAAGGCTATATTCCTTCACGAGG-GGGTATTAGAAATAGAACTGTGCAAGTTGACATGTACATGCAATGCCCAGCATCCTCA-CACTGGTA i cebCap1.NW_016107695v1 C 0 I 2 s aotNan1.NW_018494782v1 1419537 195 - 1813869 GGAATTGCTGCCTGTAAATTTGAGTGAGAGTCCAGGGGAAAGACCTGCA-----------------TGGCGCATGG--ATGGTGTGCTGGCGGA--TTGTGAATGCGTTAGCCGGGAACGCTGTCTGGAAGGCAATATTCCTTCACGAGG-TGGTGTTAGAAATAGGATCGTGCAAGCTGACATATACAAGCAATGCCCAGCATCCTCA-CACTGGTA i aotNan1.NW_018494782v1 C 0 I 2 s canFam3.chr1 56099015 180 + 122678785 GGAAGTGTTACCA------------GAGGGTACAGACCCTGTAGGTGGA------------AGCCCCATCACATTGCCACGGGGCCCATCC-------------GTATTCGTCAGGCTCACTGTCTAGAAGGTGTTACTCTTTCAAGAGGTGGG-ATTTTAAATAAGGCTGCATACGTTTGCACGTACGTGTCATGCTAAAAATGTTTAGCACTGATA i canFam3.chr1 C 0 I 2 s dasNov3.JH569188 483254 185 + 760995 GAAATTGTTTCCTGTAAATAGGGAGCAAGGTTAAGC----------------------------TTGGGCACATTA--ACAACATGTC--CTGAATTGGTGAATGAGTCACCTGGGCACACTGTCTGGATGGAATTATACTTTTAAGAGGCTAATATTTCCAATAAGACTTCGTAAGTTGATACCTATATGCAATGCTAAATTTTTAAA-AATCGATG i dasNov3.JH569188 C 0 I 2 a score=867261.000000 s hg38.chr6_KB021644v2_alt 2946 87 + 185823 AACTCTCACCATTCTTGACTGAAGAAACAGGGTGTGATGGGTAATTGGA----AAAAGCAAAAACGCTGAACAGGACATCTGTGAAGCA-TT s panTro5.chr6 173457489 87 + 175400573 AACTCTCACCATTCTTGACTGAAGAAACAGGGTGTGATGGGTAATTGGA----AAAAGCAAAAACGCTGAACATGACATCTGTGAAGCA-TT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171721358 87 + 173848474 AACTCTCACCATTCTTGACTGAAGAAACAGGGTGTGATGGGTAATTGGA----AAAAGCAAAAACGCTGAACATGACATCTGTGAAGCA-TT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11405867 87 - 12463322 AACTCTCACCATTCTTGACTGAAGAAACAGGGTGTGATGGGTAATTGGA----AAAAGCAAAAACGCTGAACACGACATCTGTGTAGCA-TT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156232437 87 + 157873769 AACTCTCACCGTTCTTGACTGAAGAAATAGGGTGTGATGGATAATTGGA----AAAAGCAAAAACGCTGAACACAACATCTGTGAAGCA-TT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170258885 84 + 172585720 AACTCTCACCATTCTTGACTGAAGAAACAGGGTGTGATGGATAATTGGA----AAGAGCAGAAACGCTGAAC---ACATCTGTGAAGCA-TT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169004496 84 - 170955103 AACTCTCACCATTCTTGACTGAAGAAACAGGGTGTGATGGATAATTGGA----AAGAGCAGAAACGCTGAAC---ACATCTGTGAAGCA-TT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8291755 84 + 10161646 AACTCTCACCATTCTTGACTGAAGAAACAGGGTGTGATGGATGATTGGA----AAGAGCAGAAACGCTGAAC---ACATCTGTGAAGCA-TT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1321189 84 + 3144229 AACTCTCACCATTCTTAACTGAAGAAACAGGGTGTGATGGATAATTGGA----AAGAGCAGAAACGCTGAAC---ACATCTGTGAAGCA-TT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96600627 84 + 98384682 AACTCTCACCATTCTTGACTGAAGAAACAGGGTGTGATGGATAATTGGA----AAGAGCAGAAACGCTGAAC---ACATCTGTGAAGCA-TT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8143348 84 - 10857215 AACTCTCACCATTCTTGACTGAAGAAATAGGGTGTGATGGATAATTGGA----AAGAGCAGAAATGCTGAAC---ACATCTGTGAAGCG-TT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15539152 85 - 23502949 AACTCTCACCATTCTTGACTGAAGAAACAGGGTGTGATGGATAATTGGA----AAGAGCAGAAATGCTGAAC---ACATCTGTGAAGCATTT i colAng1.NW_012114488v1 I 308 C 0 s calJac3.chr4 169805691 86 + 171630274 AGCTCTCACCATTCTTGACTGAAGAAACA-GGCGCGGTGGATAAATGGA----AAAAGTAAAATCATCGAGCGAGACATCTGTGAAGTG-TT i calJac3.chr4 I 2 C 0 s saiBol1.JH378287 1230993 86 - 2905041 AACTCTCACCATTCTTGACTGAAGAAACA-GGCATGATGGATATGTGCA----AAAAGTAAAAACATCGAGCGGAACATCTGTGAAGTG-TT i saiBol1.JH378287 I 342 C 0 s cebCap1.NW_016107695v1 1182594 86 - 2164891 AACTCTCACCATTCTTGACTGAAGGAACA-GGCATGATGGATAAATGGA----AAAAGTAAAAACACCGAGCGAGACATCTGTGAAGTG-TT i cebCap1.NW_016107695v1 I 2 C 0 s aotNan1.NW_018494782v1 1419734 86 - 1813869 ATCTCTCACCATTCTTGACTGAAGAAACA-GGCATGATGGATAAATGGA----AAAAGTAAAAACATCGAGCGAGACATCTGTGGAGTG-TT i aotNan1.NW_018494782v1 I 2 C 0 s canFam3.chr1 56099197 85 + 122678785 AATTTTCACCATTTTTGGCTGACAAAGCAGGGCAGGAGGGCGAGTTGGA----TAAATTACAAATGGTGAAT--GAGGTGTGTGGAGTA-TT i canFam3.chr1 I 2 C 0 s dasNov3.JH569188 483441 85 + 760995 ACTCCTCACCATTCTTGGCTGAAGAAATAGGGTAGGAT-GCTAACTGGATTTTAAAA--AAAAATACTGAAA---ACACTTGTGGAGTA-TT i dasNov3.JH569188 I 2 I 1638 a score=1295257.000000 s hg38.chr6_KB021644v2_alt 3033 125 + 185823 -GGTTTTAAAGTTGGGAAAATATGAAAAATCCAGACACACCTGTGGAAAGAACATGCCCTGAAGGTACAGGTAAGGCT------------------------AGCCCAGGGAGGGAAGGAGAGAGCCACAGGCA-GGGAGGGCGCAGCCAG s panTro5.chr6 173457576 125 + 175400573 -GGTTTTAAAGTTGGGAAAATACGAAAAATCCAGACACACCTGTGGAAAGAACATGCCCTGAAGGTACAGGTAAGGCT------------------------AGCCCAGGGAGGGAAGGAGAGAGCCACAGGCA-GGGAGGGCGCAGCCAG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171721445 125 + 173848474 -GGTTTTAAAGTTGGGAAAATACGAAAAATCCAGACACACCTGTGGAAAGAACATGCCCTGAAGGTACAGGTAAGGCT------------------------AGCCCAGGGAGGGAAGGAGAGAGCCACAGGCA-GGGAGGGCACAGCCAG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11405954 126 - 12463322 -GGTTTTAAAGTTGGGAAAATATGAAAAATCCAGACACACCTGTGGAAAGAACATGCCCTGAAGGTACAGGTAAAGCT------------------------AGCCCAGGGAGCGAAGGAGAGAGCTGCAGGCAGGGGAGGGCGCAGCCAG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156232524 126 + 157873769 -GGTTTTAAAGTTGGGAAAATATGAAAAATCCAGACACACCTGTGGAAAGAACATGCCCTAAAGGTACAGGTAAGGCT------------------------AGCCCagggagggagggagagagctgcaggcaggggagggCGCAGCCAG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170258969 150 + 172585720 -GGTTTTAAAGTTGGGAAAATGTGAAAAATCCAGACCCACCTTTGGAAAGAACATGCCCTGAAGGTACAGGTAGGGCTGAGTTTCCTGTCTGAGGAGTTGGCAGCCCAGGGAGGGAAGGAGAGAGCCGCAGGCAGGGGAGGGTGCAGCCAG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169004580 150 - 170955103 -GGTTTTAAAGTTGGGAAAATGTGAAAAATCCAGACCCACCTTTGGAAAGAACATGCCCTGAAGGTACAGGTAGGGCTGAGTTTCCTGTCTGAGGAGCTGGCAGCCCAGGGAGGGAAGGAGAGAGCCGCAGGCAGGGGAGGGTGCAGCCAG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8291839 150 + 10161646 -GGTTTTAAAGTTGGGAAAATGTGAAAAATCCAGACCCACCTTTGGAAAGAACATGCCCTGAAGGTACAGGTAGGGCTGAGTTTCCTGTCTGAGGAGTTGGCAGCCCAGGGAGGGAAGGAGAGAGCCGCAGGCAGGGGAGGGTGCAGCCAG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1321273 150 + 3144229 -GGTTTTAAAGTTGGGAAAACGTGAAAAATCCAGACCCACCTTTGGAAAGAACATGCCCTGAAGGTATAGGTAGGGCTGAGTTTCCTGTCTGAGGAGTTGGCAGCCCAGGGAGGGAAGGAGAGAGCCACAGGCAGGGGAGGGTGCAGCCAG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96600711 150 + 98384682 -GGTTTTAAAGTTGGGAAAACGTGAAAAATCCAGACACACCTTTGGAAAGAACATGCCCTGAAGGTACAGGTAGGGCTGAGTTTCCTGTCTGAGGAGTTGGCAGCCCAGGGAGGGAAGGAGAGAGCCACAGGCAGGGGAGGGTGCAGCCAG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8143432 150 - 10857215 -GGTTTTAAAATTGGGAAAACGTGAAAAATCCAGACCCACCTTTGGAAAGAACATGCCCTGAAGGTACAAGTAGGGCTGAGTTTCCTGTCTGAGGAGTTGGCAGCCCAGGGAGGGAAGGAGAGAGCCGCAGGCAGGGGAGGGTGCAGCCAG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15539237 150 - 23502949 -GGTTTTAAAGTTGGGAAAATGTGAAAAATCCAGACACAACTTTGGAAAGAACATGCCCTGAAGGTACAGGTAGGGCTGAGTTTCCTGTCTGAGGAGTTGGCAGCCCAGGGAGGGAAGGAGAGAGCCGCAGGCAGGGGAGGGTGCAGCCAG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169805777 148 + 171630274 GGGTTTTGTAGTTGGGAAAATGTGGAAAATCCAGACACAC--ATGGAAAGAAAGTTCTCTGAAGGTACAGGTGGGACTGAGTGCCCT-TCTAAAGAGTTGGCATCCCAGGGAGGGAAGGAGCAAGCCACAGGCAGGTGAGGGCACAGCCAG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1231079 148 - 2905041 GGGTTTTACAGTTGGGAAAATGTGAAAAATCCAGACACAC--GTGGAAAGAAAGTGCCCTGAAGGTACAGGTAGGGCTGAGTGCCCG-TCTAAAGAGTTGGCAGCCCAGGGAGGGAAGGAGCAAGCCACAGGCAGGTGAGGGTGCAGCGAG i saiBol1.JH378287 C 0 I 230 s cebCap1.NW_016107695v1 1182680 147 - 2164891 GGGTTTTATAGTTGGGACAATGTGAAAAATCCAGACACAC--ATGGAAAGAAAGTGCCCTGAAGGTACAGGTAGGGCTGAGTGCCCT-TCTAAAGAGTTGGCAGCCCAGGGAGGGAAGGAGCAAGCCACAGGCA-GTGAGGGCACAGCCAG i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1419820 148 - 1813869 GGGTTTCACAGTTGGGAAAATGTGAAAAATCCAGACACAC--GTGGGAACAAAGTGCCCTGAAGGTACAGGTGGGGCTGAGTGCCCT-TCTAAAGAGTTGGCGGCCCAGGGAGGGAAGGAGCGAGCCGCAGGCAGGTGAGGGTGCAGCCAG i aotNan1.NW_018494782v1 C 0 C 0 s canFam3.chr1 56099282 143 + 122678785 TAGTTTCAAATTTGGGGAAAAGTGAAAAATGCAGACACATA-CTGGACAGAAAGTGCCCTGAAGGCATAACCGTGATTGGGTTTCCTGTCTGACAAGTTCCAAACCCCAGAA------CAGACATCTGCAGGCA-GGGGGTGTGAGGTCCC i canFam3.chr1 C 0 C 0 e dasNov3.JH569188 483526 1638 + 760995 I a score=25980.000000 s hg38.chr6_KB021644v2_alt 3158 3 + 185823 CTG- s panTro5.chr6 173457701 3 + 175400573 CTG- i panTro5.chr6 C 0 C 0 s panPan2.chr6 171721570 3 + 173848474 CTG- i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11406080 3 - 12463322 CTG- i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156232650 3 + 157873769 CTG- i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170259119 3 + 172585720 CTG- i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169004730 3 - 170955103 CTG- i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8291989 3 + 10161646 CTG- i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1321423 3 + 3144229 CTG- i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96600861 3 + 98384682 CTG- i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8143582 3 - 10857215 CTG- i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15539387 3 - 23502949 CTG- i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169805925 3 + 171630274 CTT- i calJac3.chr4 C 0 I 269 s saiBol1.JH378287 1231457 3 - 2905041 CTG- i saiBol1.JH378287 I 230 C 0 s cebCap1.NW_016107695v1 1182827 3 - 2164891 CTG- i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1419968 3 - 1813869 CTG- i aotNan1.NW_018494782v1 C 0 C 0 s canFam3.chr1 56099425 4 + 122678785 CTCA i canFam3.chr1 C 0 C 0 e dasNov3.JH569188 483526 1638 + 760995 I a score=136801.000000 s hg38.chr6_KB021644v2_alt 3161 20 + 185823 CCT---------------------------------------------------------------------GTCAATCCCCCAGCCAC s panTro5.chr6 173457704 20 + 175400573 CCT---------------------------------------------------------------------GTCAATCCCCCAGCCAC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171721573 20 + 173848474 CCT---------------------------------------------------------------------GTCAATCCCCCAGCCAC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11406083 20 - 12463322 TCT---------------------------------------------------------------------GTCAATCCCCCAGCCAC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156232653 89 + 157873769 CCTGTCAATCTCCCAGCCACCTGCCTGTCAATCCCCCGGCCACCTGCCCGTCAATCCCCCAGCCACCTGCCCGTCAATCCCCCGGCCAC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170259122 20 + 172585720 CCT---------------------------------------------------------------------GTCACTCTCCCGGCCAC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169004733 20 - 170955103 CCT---------------------------------------------------------------------GTCACTCTCCCGGCCAC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8291992 20 + 10161646 CCT---------------------------------------------------------------------GTCACTCTCCCGGCCAC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1321426 20 + 3144229 CCT---------------------------------------------------------------------GTCAATCCCCCGGCCAC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96600864 20 + 98384682 CCT---------------------------------------------------------------------GTCAGTCCCCCGGCCAC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8143585 20 - 10857215 CCT---------------------------------------------------------------------GTCAATCCCCCGGCCAC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15539390 14 - 23502949 CCT---------------------------------------------------------------------GTCGATCCCCC------ i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169806197 20 + 171630274 CCC---------------------------------------------------------------------GTCAATCCTCCAGTCAT i calJac3.chr4 I 269 C 0 s saiBol1.JH378287 1231460 20 - 2905041 CCT---------------------------------------------------------------------GTCAATCCTCCAGTCAC i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1182830 20 - 2164891 CCT---------------------------------------------------------------------GTCAATCCTCTAGCCAC i cebCap1.NW_016107695v1 C 0 I 89 s aotNan1.NW_018494782v1 1419971 20 - 1813869 CCC---------------------------------------------------------------------GTCAGTCCCCCAGCCAC i aotNan1.NW_018494782v1 C 0 I 22 s canFam3.chr1 56099429 23 + 122678785 CCTGGG------------------------------------------------------------------GTAAGTCTGCAAGCCTC i canFam3.chr1 C 0 C 0 e dasNov3.JH569188 483526 1638 + 760995 I a score=111385.000000 s hg38.chr6_KB021644v2_alt 3181 22 + 185823 CTGCCCCTCTATCCCCCGGCTG s panTro5.chr6 173457724 22 + 175400573 CTGCCCCTCAATCCCCCGGCTG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171721593 22 + 173848474 CTGCCCCTCAATCCCCCGGCTG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11406103 22 - 12463322 CTGCCCCTCAATCCCCTGGCTG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156232742 22 + 157873769 CTGCCTGTCAATCCCCCGGCCA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170259142 22 + 172585720 CTGTCTGTCAATCTCCTGGCCA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169004753 22 - 170955103 CTGTCTGTCAATCTCCTGGCCA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8292012 22 + 10161646 CTGTCTGTCAATCTCCTGGCCA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1321446 22 + 3144229 CTGTCTGTCACTCCCCCGGCCA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96600884 22 + 98384682 CTGTCCGTCAATCTCCCGGCCA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8143605 22 - 10857215 CTGTCCGTCACTTCCCCGGCCA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15539404 5 - 23502949 -----------------GGCCA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169806217 22 + 171630274 CTCCCTGTCAATCTCCCAGCCA i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1231480 22 - 2905041 GTACCCGTCAATCTCCCAGCCA i saiBol1.JH378287 C 0 C 0 s aotNan1.NW_018494782v1 1420013 22 - 1813869 CTACCCATCAATCCCCCACCCA i aotNan1.NW_018494782v1 I 22 C 0 s canFam3.chr1 56099452 10 + 122678785 --------CAGGTGACCG---- i canFam3.chr1 C 0 C 0 e cebCap1.NW_016107695v1 1182850 89 - 2164891 I e dasNov3.JH569188 483526 1638 + 760995 I a score=2454356.000000 s hg38.chr6_KB021644v2_alt 3203 280 + 185823 CAAGGTGATGGACAGCTCGGTTGTCAGCATTTCCTGCGTGAGTGTTCTACAGTGTGACCTGTGAAACAGGGTTATACTTCTCCAGAGCAGGCAGATATCTGATTACAAACAACTGCAGTTGTATGCAATACTTGCAATACTCAATTACAACACA----CAATTTATTTTTAAATCACAGAAATA--TATATATGTTTTCCTACTGCTCTAACCTTCCCTGAAGGTTCTAAGTTAGCACCTTGCTTGCAGGGGTA-TGACAGAGTTTGctctctcattccctttctct s panTro5.chr6 173457746 284 + 175400573 CAAGGTGATGGACAGCTCGGTTGTCAGCATTTCCTGCGTGAGTGTTCTACAATGTGACCTGTGAAGCAGGGTTATTCTTCTCCGGAGCAGGCAGATATTTGATTATAAACAACTGCAGTTGTATGCAATACTTGCAATACTCAATTACAACACAAACTTAATTTATTTTTAAATCACAGAAATA--TATATATTTTTTCCTACTGCTCTAACCTTCCCTGAAGGTTCTAAGTTAGCACCTTGCTTGCAGGGGTA-TGACAGAGTTTGctctctcactccctttctct i panTro5.chr6 C 0 C 0 s panPan2.chr6 171721615 283 + 173848474 CAAGGTGATGGACAGCTCGGTTGTCAGCATTTCCTGCGTGAGTGTTCTACAATGTGACCTGTGAAGCAGGGTTATTCTTCTCCGGAGCAGGCAGATATTTGATTATAAACAACTGCAGTTGTATGCAATACTTGCAATACTCAATTACAACACAAACTTAATTTA-TTTTAAATCACAGAAATA--TATATTATTTTTCCTACTGCTCTAACCTTCCCTGAAGGTTCTAAGTTAGCACCTTGCTTGCAGGGGTA-TGACAGAGTTTGctctctcactccctttctct i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11406125 280 - 12463322 CAAGGTGATGGACAGCTCGGTTGTCAGCATTTCCTGCGTGAGTGTTCTACAATGTGACCTGTGAAGCAGGGTTATACTTCTCCAGAGCAGGCAGATATTTGATTATAAACAACTGCAGTTGTATGCAATACTTGCAATACTCAATTACAACACA----CAATTTATTTTTAAATCACAGACATA--TATATATTTTTTCCTACTGCTCTAACCTTCCCTGAAGGTTCTAAGTTAGCACCCTGCTTGCAGGGGTA-TGACAGAGTTTGctctctcactccctttctct i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156232764 283 + 157873769 CAAGGCGATGGACAGCTCAGGTGTCAGTG-TCCCTGCGTGAGTGCTCTACAATGTGACCTGTGAAACAGGGTTATACTTCTCCAGAGCAGGAAGATATTTGATTATAAACAACTGCAGTTGTATGCAATACTTGCAATACTCAATTACAACACACACTTAATTTATTTTTAAATCACAGAAATA--TACATATTTTTTCCTACTGCTCTAACCTTCCCTGAAGGTTCTAAGTTAGCACCTTGCTTGCAGGGGTG-TGACAGAGTTTGctctgtcactccctttctct i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170259164 274 + 172585720 CAAGGTGATGGACAGCCCGGTGGTCAGCA-TCCCTGCGTGAGTGTTCTACAATATGACCTGTGAAACAGGGTTATACTTCTCCAGAGCAGGCAGATATTTGATTATAAACAACTGCAATTGTA---------TGCAATACTCAATTACAACACACACGTAATTTATTTTTAAATCACAGAAATA--TATTTATTTTTTCCTACTGCTGTAACCTTCCCTGAAGGTTCTAAGTTAGCGCCTTGCTTGCAAGGGTA-TGACAGAGTtcgctctctcactccctttctct i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169004775 274 - 170955103 CAAGGTGATGGACAGCCCGGTGGTCAGCA-TCCCTGCGTGAGTGTTCTACAATATGACCTGTGAAACAGGGTTATACTTCTCCAGAGCAGGCAGATATTTGATTATAAACAACTGCAATTGTA---------TGCAATACTCAATTACAACACACACGTAATTTATTTTTAAATCACAGAAATA--TATTTATTTTTTCCTACTGCTGTAACCTTCCCTGAAGGTTCTAAGTTAGCGCCTTGCTTGCAAGGGTA-TGACAGAGTtcgctctctcactccctttctct i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8292034 274 + 10161646 CAAGGTGATGGACAGCCCGGTGGTCAGCA-TCCCTGCGTGAGTGTTCTACAATATGACCTGTGAAACAGGGTTATACTTCTCCAGAACAGGCAGATATTTGATTATAAACAACTGCAATTGTA---------TGCAATACTCAATTACAACACACACGTAATTTATTTTTAAATCACAGAAATA--TATTTATTTTTTCCTACTGCTGTAACCTTCCCTGAAGGTTCTAAGTTAGCGCCTTGCTTGCAAGGGTA-TGACAGAGTtcgctctctcactccctttctct i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1321468 274 + 3144229 CAAGGTGATGGACAGCCCGGTGGTCAGCA-TCCCTGCGTGAGTGTTCTACAATATGACCTGTGAAACAGGGTTATACTTCTCCAGAGCAGGCAGATATTTGATTATAAACAACTGCAATTGTA---------TGCAATACTCAATTACAACACACACGTAATTTATTTTTAAATCACAGAAATA--TATTTATCTTTTCCTACTGCTGTAACCTTCCCTGAAGGTTCTAAGTTAGCGCCTTGCTTGCAGGGGTA-TGACAGAGTtcgctctctcactccctttctct i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96600906 274 + 98384682 CAAAGTGATGGACAGCGCGGTGGTCAGCA-TCCCTGCGTGAGTGTTCTACAATATGACCTGTGAAACAGGGTTATACTTCTCCAGAGCAGGCAGATATTTGATTATAAACAACTGCAGTTGTA---------TGCAATACTCAGTTACAACACACACGTAATTTATTTTTAACTCACAGAAATA--TATTTATTTTTTCCTACTGCTGTAACCTTCCCTGAAGGTTCTAAGTTAGCGCCTTGCTTGCAGGGGTA-TGACAGAGTTTGctctctcactccctttctct i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8143627 274 - 10857215 CAAGGTGATGGACAGCCCGGTGGTCAGCA-TCCCTGCGTGAGTGTTCTACAATATGACCTGTGAAACAGGGTTATACTTCTCCAGAGCAGGCAGATATTTGATTATAAACAACTGCAATTGTA---------TGCAATACTCAATGACAACACACACGTAATTTATTTTTAAATCACAGAAATA--TATTTATCTTTTCCTACTGCTGTAACCTTCCCTGAAGGTTCTAAGTTAGAGCCTTGCTTGCAGGGGTA-TGACAGAGTtcgctctctcactccctttctct i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15539409 269 - 23502949 CAAGGTGATGGACTGCCCGGTGGTCAGCA-TCCCTGCGTGAGTGTTCTACAATGTGACA-GTATAACAGGGTTATACTTCTCCAGAGCAGGCAGATATTTGATTATAAGCAACTGCAGTTGTA---------TGCAATACTCAAGTACAACACAC----AATTTATTTTTAAATCACAGAAATATGTATTTATTTTTTCCTACTGCTCTAATCTTCCCTGAAGGTTCTAAGTTAGAGCCTTGCTTGCAGGGGTA-TGACAGAGTTTG--ctctcactccctttctct i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169806239 261 + 171630274 CAAGGTGATGGACAGCTTGGTGGTCAGCA-TCCCTACACGAGTGTTCTAAA--ATGAACTGTGAAAT-GGGTTCCCCTTCTCCAGAGTAGGCAGATATTTGATTACAAACAACTGCAGTTTTA---------TGCAAGACTCAGTTACGACACACACGTAATTTATTATTAAATCACGGGAGTA------------TTCCTACTGCTCTAGCCTTCCCCGAGGGTTCTAAGTTAGCACGCTGCTTGCAGGGGTC-TGACAGCATTTGctctctcgctccctttttct i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1231502 263 - 2905041 CAAGGTGATGGACAGCTTGGTGGTCAGCA-TCTCTGCGTGAGTGTTCTAAAATATGACCTGTGAAATAGGATTCCCCTTCTCCAGAGTAGGCAGATATTTGATTACAAACAACTGCTGTTGTA---------TGTAATACTCAGTTACAACACACACATAATTTATTATTAAATCACGGAAAGA------------TTCCTACGGCTGTAAACTTCCCTGAAGGTTCTAAGTTGGCACGGTGCTTGCAGGGGTC-TGA-AGCATTTGCTCTCTGGCTCCCTTCCTTT i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1182939 264 - 2164891 CAAGGTGATGGACAGCTTGGTGGTCAGCA-TCCCTGCATGAGTGTTCTAAACTATGACCTGTGAAATAGGGTTCCCCTTCTCCAGAGTAGGCAGACATTTGATTACAAACAACTGCAGTTGTA---------TGCAACACTCAGTTACAACACACACATAATTTATTATTAAATCACGGAAATA------------TTCCCACTACTCTAAGCTTCCCTGAAGGTTCTAAGTCAGCGCGCTGCTTGCAGGGGTC-TGACAGGGTtcgctctctcactccctctctct i cebCap1.NW_016107695v1 I 89 I 1674 s aotNan1.NW_018494782v1 1420035 264 - 1813869 CAAGGTGATGGACAGCTTGGTGGTCAGCA-TCCTTGCATGAGTGTTCTAAAATACGACCTGTGAAATAGGGTTCCCCTTCTCCAGAGGAGGCAGATATTTGATTACGAACAACTGCGGTTGTA---------TGCAATACTCAGTTACAACACACACGTAATTTATTATTAAATCACAGGAATA------------TTCCTACCGCTCTAACCTTCCCTGAAGGTTCTAAGTTAGCACGCTGCTTGCAGGGGTC-TGACAGCGtctgctctctccctccctttctct i aotNan1.NW_018494782v1 C 0 C 0 s canFam3.chr1 56099462 184 + 122678785 CGGGGAGCTGAGGAG----------AGAA------------ACGCTCTGAAATATGGCC-------------TTCCCTTCTGCAGGGAAGTC--------------------CTGTGGGTTCA---------CCCAGCACCCGGTTACCAAGCACAGGTCATTGATTATTGAGTGAAGAAAGTA------AACTCTTCTGTAAGGCTCT-----------AGGTGTCTAAGTCACCACTTGGC---CACAGACACTAGCGGAGCTTGC------------------- i canFam3.chr1 C 0 C 0 e dasNov3.JH569188 483526 1638 + 760995 I a score=5566249.000000 s hg38.chr6_KB021644v2_alt 3483 741 + 185823 cttatctctctctctctctt----tctctctctctctct----ccctctttcactctccctttccctttccctCCCTCTTCTTACGTCTTTTTTTC-CTCTCTCTCTCTTATTCACTCCTCCA--CC--CTCTCTCTCCCCTACTGCCAT---CTGAAC------tt-attaaaaattccaaacacatgtaccagtggagacc-tgtgattc------cctccatgttctcctcacctggctgcaacaattattgaggcaaggc----cagttttgtttcaccgaacgtccccacccgctGGCTCTGGTTTCATCTGCTGTC----CCTTGCCCTTG-CCCAGGTTCTCAACTCCC--CAGA-TATTTTGAAGCACATTCCTGCCCGCAGCCCACACCTCCCTAGACAGCCCCAGAAATCACCCTTTGATTTGCCGTGATGTCGCAGCTTTTCCGCAGATGAAGTTGG--------CAGTGAG-------CTGAGA--------------TTCCACCTGGTAAGTACGAGGTGGCATCCTTGGGACCTGATGCCTAGCTTCTCATTCGTCTTTTGGAAAATGTGTTGTAATTTGGCACGGTGTGACAGCAAGTGACTTAATATGATTTTAGTGGAACTGGGGTTCAGAGGGCTGAGAGGGTTTACAAAATGGGTAACTTTTCTTAAGACATGTGTACATG-TCTGTATGACAGATGAATAGTGATCTGGTATagagacagacagatgatgagagatggatggatagatatc------gagagagag------------------agagag--agTG-TGTGTGTGTGCATGGGCG----------------CACTC s panTro5.chr6 173458030 733 + 175400573 cttatctctctctctctctt----tctctctctctctct----ccctctTtcactctccctttccctttccctccctcttcttatgtctttttttc-ctctctctctc--attcactcctcca--cc--ctctctctcCCCTACTGCCAT---CTGAAC------tt-attaaaaattccaaacacatgtaccagtggagacc-tgtgattc------cctccatgttctcctcacctggctgcaacaattattgaggcaaggc----cagttttgtttcaccgaacgtccccacccactGGCTCTGGTTTCATCTGCTGTC----CCCTGCCCTTG-CCCAGGTTCTCAACTCCC--CAGA-TATTTTGAAGCACATTCCTGCCCGCAGCCCACACCTCCCTAGACAGCCCTAGAAATCACCCTTTGATTTGCCGTGATGTCGCAGCTTTCCCGCAGATGAAGTTGG--------CAGTGAG-------CTGAGA--------------TTCCACCTGGTAAGTACAAGGTGGCATCCTTGGGACCTGATGCCTAGCTTCTCATTCGTCTTTTGGAAAATGTGTTGTAATTTGGCACGGTGTGACAGCAAGTGACTTAATGTGATTTTAGTGGAACTGGGGTTCAGAGGGCTGAGAGGGTTTACAAAATGGGTAACTTTTCTTAAGAC--GTGTACATG-TCTGTATGACAGATGACTAGTGATCTGGTATagagacagacagatgatgagagatggatggatagatatc------gagagagag------------------agagag-------TGTGTGTGTGCATGTGCG----------------CACTC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171721898 729 + 173848474 cttatctctctctctctctt----tctctctctctctct----ccctctTtcactctccctttccctttccctccctcttcttatgtctttttttc-ctctctctctcttattcactcctcca--cc--ctctctctcCCCTACTGCCAT---CTGAAC------tt-attaaaaattccaaacacatgtaccagtggagacc-tgtgattc------cctccatgttctcctcacctggctgcaacaattattgaggcaaggc----cagttttgtttcaccgaacgtccccacccgctGGCTCTGGTTTCATCTGCTGTC----CCCTGCCCTTG-CCCAGGTTCTCAACTCCC--CAGA-TATTTTGAAGCACATTCCTGCCCGCAGCCCACACCTCCCTAGACAGCCCTAGAAATCACCCTTTGATTTGCCGTGATGTCGCAGCTTTCCCGCAGATGAAGTTGG--------CAGTGAG-------CTGAGA--------------TTCCACCTGGTAAGTACGAGGTGGCATCCTTGGGACCTGATGCCTAGCTTCTCATTCGTCTTTTGGAAAATGTGTTGTAATTTGGCACGGTGTGACAGCAAGTGACTTAATGTGATTTTAGTGGAACTGGGGTTCAGAGGGCTGAGAGGGTTTACAAAATGGGTAACTTTTCTTAAGAC--GTGTACATG-TCTGTATGACAGATGACTAGTGATCTGGTATAG----AGACAGATGATGAGAGATGGATGGATAGCTATC------GAGAGAGAG------------------AGTG---------TGTGTGTGTGCATGTGCG----------------CACTC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11406405 747 - 12463322 cttatctctctctctctctttttctctctctctctctct----ccctctttcactctccctctccctttccctccctcttcttatgtctttttttctctctctctctcttattcactcctcca--ca--ctctctctcCCCTACTGCCAT---CTGAAC------tt-attaaaaattccaaacacatgtaccagtggagacc-tgtgattc------cctccatgttctcctcacctggctgcaacaattattgaggcaaggc----cagttttgtttcaccgaacgtccccacccgctGGCTCTGGTTTCATCTGCTGTC----CCCTGCCCTTG-CCCAGGTTCTCAACT-CC--CAGA-TATTTTGAAGCACATTCCTGCCCGCAGCCCACACCTCCCTAGACAGCCCCAGAAATCACCCTTTGATTTGCTGTGATGTCGTAGCTTTCCCGCAGATGAAGTTGG--------CAGTGAG-------CTGAGA--------------TTCCACCTGGTAAGTACGAGGTGCCATCCTTGGGACCTGATGCCTAGCTTCTCATTCGTCTTCTGGAAAATGTGTTGTAATTTGGCACAGTGTGACAGCAAGTGACTTAATGTGATTTCAGTGGAACTGGGGTTCAGAGGGCTGAGAGGGTTTACAAAATGGGTAACTTTTCTTAAGACATGTGTACATG-TCTGTATGACAGATGAATAGTGATCTGGTATAGAGACAGACAGATGATGAGAGATGGATGGATAGGTATC------GAGAGAGAg------------------tgtgtgtgtgtg-tgtgtgtgtgcatgtgtg----------------CACTC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156233047 738 + 157873769 ct------tctctctctctt----tttctctctctctct----ccctttttccctctccctttccctttccttctctcttcttatatcttttttt--ctctctctctcttattcactcctcca--ccctctctctctcCCCTACCGCCAT---CTAAAC------tt-attaaaaattccaaacgcatgtgccagtggagacc-tgtgattc------cctccatgttctcctcacctggctgcaacaattattgaggcaaggc----cagttttgtttcaccaaatgtccccaccctctggctccGGTTTCATCTGCTGTC----CCCTGCCCTTGCCCCAGGCTCACAACACCCTATAGA-TATTTTGAAGCACATCCCCGCCCCCAGCCCATCCCTCCCTAGACAGCCCCAGAAACCACCCTTTGATTTGTGGTGATGTCGCAGCTTTCCCGCAGATGAAGTTGG--------CAGTGAG-------CTGAGA--------------TTCCACCTGGTAAGTACGAGGTGGCGTCCTTGGGACCTGACACCTAGCTTCTCATTCATCTTTTGGAAAA---GGTGTAATTTGGCATGGTGTGACAGCAAGTGACTTAATGTGATTTTAGTGGAACTGGGGTTCAGAGGGCTGAGAGGGTTTACAAAATAGGTAACCTTTCTTAAGACATGTGTACATG-TCTGTATGACAGATGAATAGTGATCTGGTATagagacagacagatgatgagagatggatggatagatatc------gagagagag------------------agagagaAAAAG-TGTGTGTGTGCATGTGCG----------------CACTC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170259438 717 + 172585720 ct------tctctct------------------ctctct----ccccctctctttctccctctccctttccctctctcttcttatctcttgttttc-------ctttcttattcACCCCTCCA--CCTTCTCTCTCTCACCTACTGCCAT---CTGaac------tt-gttaaaaattccaaacacatgtaccagtgaagaccgtgtaattc------cctccatgttctcctcaccgggctgcaacaattactgaggcaaggc----cagttttgtttcaccgaacgtccccaccACCTGGCTCGGGTTTCATCTGCTGTC----CCCTGCCCTTGCCCCAGGTTCACAACTCCC--TAGA-TATTTTGAAGCACATCCCCACCCCCAGCCCATACTTCCCTAGACAGCCCCAGAAATCACCCTTTGATTTACCGTGATGTTGCAGCTTTCCTGCAGATTAAGTTGG--------CAGTGAG-------CTGAGA--------------TTCCACCTGGTAAGTACGAGGTGGTACCCTCAGAACCTGACGCCTAGCTTCTCATTTGTCTTTTGGAAAAGGTGTTGTAATTTGGCACGGTGTGACAGCAAGTGACTTAATGTGATTTTAGTGGAACTGGGGTTCAGTGGGCTGAGAGGGTTTACAAAATGGGTAACTTTTCTTGAGACATGTGTACATG-TCTGTATgacagatgaatagtgatctagtatag----agacagatgatgagagatggatggatagataTT------gagagagag------------------agagagagagag-agagTGTGTACATGTGTG----------------CACTC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169005049 713 - 170955103 ct------tctctct------------------ctctct----ccccctctctttctccctctccctttccctctctcttcttatctcttgttttc-------ctttcttattcACCCCTCCA--CCTTCTCTCTCTCACCTACTGCCAT---CTGAAC------TT-GTTAaaaattccaaacacatgtaccagtgaagaccgtgtaattc------cctccatgttctcctcaccgggctgcaacaattactgaggcaaggc----cagttttgtttcaccgaacgtccccaccAGCTGGCTCGGGTTTCATCTGCTGTC----CCCTGCCCTTGCCCCAGGTTCACAACTCCC--TAGA-TATTTTGAAGCACATCCCCACCCCCAGCCCATACTTCCCTAGACAGCCCCAGAAATCACCCTTTGATTTACCGTGATGTTGCAGCTTTCCTGCAGATTAAGTTGG--------CAGTGAG-------CTGAGA--------------TTCCACCTGGTAAGTACGAGGTGGTACCCTCAGAACCTGACGCCTAGCTTCTCATTTGTCTTTTGGAAAAGGTGTTGTAATTTGGCACGGTGTGACAGCAAGTGACTTAATGTGATTTTAGTGGAACTGGGGTTCAGTGGGCTGAGAGGGTTTACAAAATGGGTAACTTTTCTTGAGACATGTGTACATG-TCTGTATGACAGATGAATAGTGATCTAGTATag----agacagatgatgagagatggatggatagatatt----------gagag------------------agagagagagag-agTGTGTGTACATGTGTG----------------CACTC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8292308 711 + 10161646 ct------tctctct------------------ctctct----ccccctctctttctccctctccctttccctctctcttcttatctcttgttttc-------ctttcttattcACCCCTCCA--CCTTCTCTCTCTCACCTACTGCCAT---CTGaac------tt-gttaaaaattccaaacacatgtaccagtgaagaccgtgtaattc------cctccatgttctcctcaccgggctgcaacaattactgaggcaaggc----cagttttgtttcaccgaacgtccccaccAGCTGGCTCGGGTTTCATCTGCTGTC----CCCTGCCCTTGCCCCAGGTTCACAACTCCC--TAGA-TATTTTGAAGCACATCCCCACCCCCAGCCCATACTTCCCTAGACAGCCCCAGAAATCACCCTTTGATTTACCGTGATGTTGCAGCTTTCCTGCAGATTAAGTTGG--------CAGTGAG-------CTGAGA--------------TTCCACCTGGTAAGTACGAGGTGGTACCCTCAGAACCTGACGCCTAGCTTCTCATTTGTCTTTTGGAAAAGGTGTTGTAATTTGGCACGGTGTGACAGCAAGTGACTTAATGTGATTTTAGTGGAACTGGGGTTCAGTGGGCTGAGAGGGTTTACAAAATGGGTAACTTTTCTTGAGACATGTGTACATG-TCTGTATGACAGATGAATAGTGATCTAGTATag----agacggatgatgagaggtggatggatagatatt------------gag------------------agagagagagag-agTGTGTGTACATGTGTG----------------CACTC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1321742 719 + 3144229 ct------tctctct------------------ctctct----ccctctctccctctccctctccctttccctctctcttcttatctcttgttttc-------ctctcttattcacccctcca--ccctctctctctcACCTACCGCCAT---CTGaac------tt-gttaaaaattccaaacacatgtaccagtgaagaccgtgtaattc------cctccatgttctcctcaccgggctgcaacaattactgaggcaaggc----cagttttgtttcaccgaacgtccccaccAGCTGGCTCGGGTTTCATCTGCTGTC----CCCTGCCCTTGCCCCAGGTTCACAACTCCC--TAGA-TATTTTGAAGCACATCCCCACCCCCAGCCCATACTTCCCTAGACAGCCCCAGAAATCACCCTTTGATTTACCGTGATGTCGCAGCTTTCCTGCAGATTACGTTGG--------CAGTGAG-------CTGAGA--------------TTCCACCTGGTAAGTACGAGGTGGTACCCTCAGAACCTGACGCCTAGCTTCTCATTTGTCTTTTGGAAAAGGTGTTGTAATTTGGCACGGTGTGACAGCAAGTGACTTAATGTGATTTTAGTGGAACTGGGGTTCAGTGGGCTGAGAGGGTTTACGAAATGGGTAACTTTACTTAAGACATGTGTACATG-TCTGTATGACAGATGAATAGTGATCTGGTATAG----agacagatgatgagagatggatggatagatatc----gagagagagag------------------agagagataAAG-AGTGTGTGTACATGTGTG----------------CACTC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96601180 713 + 98384682 cc------tctctct------------------ctcgct----ccctctctcactctccctctcccgttccctctctcttcttatctcttgttttc-------ctctcttattcacccctcca--ccctctctctctcACCTACCACCAT---CTGAAC------tt-attaaaaattccaaacacatgtaccagtgaagaccctgtaattc------cctccatgttctcctcaccgggctgcaacaactactgaggcaaggc----cagttttgtttcaccgaacatccccaccAGCTGGCTCGGGTTTCATCTGCTGTC----CCCTGCCCTTGCCCCAGGTTCACAACTCCC--TAGA-TATTTTGAAGCACACCCCCACCCCCAGCCCACACTTCCCTAGACAGCCCCAGAAATCACCCTTTGATTTACCGTGATGTCGCAGCTTTCCTGCAGATTAAGTTGG--------CAGTGAG-------CTGAGA--------------TTCCACCTGGTAAGTACGAGGTGGCACCCTCAGAACCTGACGCCTAGCTTCTCATTTGTCTTTTGGAAAAGGTGTTGTAATTTGGCACCGTGTGACAGCAAGTGACTTAATGTGATTTTAGTGGAACTGGGGTTCAGTGGGCTGAGAGGGTTTACAAAATGGGTAACTTTTCTTAAGACATGTGTACATG-TCTGTATGACGGATGAATAGTGATCTGGTATag----agacagatgatgagagatggatggatattga----------gagagag------------------agagagagagag-agTGTGTGTACATGTGTG----------------CACTC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8143901 715 - 10857215 ct------tctctct------------------ccctct----ccctctctccctctccctctccctttccctctctcttcttatctcttgtttcc-------ctctcttattcacccctcca--ccctctctctctcACCTACCGCCAT---CTGaac------tt-gttaaaaattccaaacacatgtaccagtgaagaccgtgtaattc------cctccatgttctcctcaccgggctgcaacaattactgaggcgaggc----cagttttgtttcaccgaaagtccccaccAGCTGGCTCGGGTTTCATCTGCTGTC----CCCTGCCCTTGCCCCAGGTTCACAACTCCC--TAGA-TATTTTGAAGCACATCCCCACCCCCAGCCCACACTTCCCTAGACAGCCCCAGAAATCACCCTTTGATTTACCGTGATGTCGCAGCTTTCCTGCAGATTAAGTTGG--------CAGTGAG-------CTGAGA--------------TTCCACCTGGTAAGTACGAGGTGGTACCCTCAGAACCTGACGCCTACCTTCTCATTTGTCTTTTGGAAAAGGTGTTGTAATTTGGCACGGTGTGACAGCAAGTGACTTAATGTGATTTTAGTGGAACTGGGGTTCAGTGGGCTGAGAGGGTTTACGAAATGGGTAACTTTACTTAAGACATGTGTACATG-TCTGTATGACGGCTGAATAGTGATCTGGTACag----agacagatgatgagaaatggatggatagatatt--------gagagag------------------agagagagagat-agTGTGTGTACATGTGTG----------------CACTC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15539678 733 - 23502949 ct------tctctctctctc----cctctctccctctct----ccctctctcactctccctctccctttccctctctcttcttatctctTGTTTTC-------CTCCCTTATTCACCCCTCCA--CCTTCTCTCTCTCACCTACCGCCAT---CTGAAC------tt-attaaaaattccaaacatatgtactggtgaagactgtgtaattc------ccttcatgttctcctcaccgggctgcaacaattactgaggcaaggccagtcagttttgtttcaccgaacgtccctaccAGCTGGCTCGGGTTTCATCTGCTGTC----CCCTGCCCTTGCCCTAAGTTCACAACTCCC--TAGA-TATTTTGAAGCACATCCCCACCCCCAGCCCACACTTCCCTATACAGCCCCAGAAATCACCCTTTGATTTGCCATGATGTCGCAGCTTTCCTGCAGATGAAGTTGG--------CAGTGAG-------CTGAGA--------------TTCCACCTGGTAAGTACGAGGTGGCACCCTCAGAACCTGACGCCTAGCTTCTCATTTGTCTTTTGGAAAAGGTGTTGTAATTTGGCATGGTGTGACAGCAAGTGACTTAATGTGATTTTAGTGGAACTGGGGTACAGTGGACTGAGAGGGTTTACGAAATGGGTAACTTTTCTTAAGAC--GTGTACATG-TCTGTATGACAGATGAACAGTGATCTGGTATag----agacagataatgagagatggatggatagatatc------gagagagag------------------agagagataaag-agTGTGTGTACATGTGTG----------------CACTC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169806500 735 + 171630274 ------------------------catctctccctgtctttctccctctcttgctctccccctc---ttccctctctcttcttatctctttttctc------tctctcttattcactcctccaccctctctctctctcCGCTACCAGCAG---CTGAAC------TT-ACTGAAAATTCC-AACACGTGTAACCGTGCAGAACGTGTGATTC------CCTCCCTGTGCTCCTCAGCTGGCTGCCAGAGTTATTGAGGCAAGTC----CTGTTTTGTTTCACTGAATGTTCCCACC------------TTTCACTGAATGTCCCCACCCTGCTCTTG-ACCAGGTCCACACCTCCC--TAGATTATTTTGAAGCACATCCCCACTCCCAGCCCCCACTTCCCTAGACATCCCCCAAAATCGCCCTTCGATTTGCCTTGATGTTGAAGCTCTCCTGCAGATGAAGTTGGCAGCTCCCCAGTAAGACTCTCCAAGGCA--------------TTCCACCTGGTAAGTACGAGGTGGCA-CCTTGGGACCTGACACCTAGCTTCTCATTTGCCTTTTGGAAAAGGTGTTGTAATCTG--ATGGTGTGATAGCAAGTGAATTCACCTGATTTTAGTGGAACTAGGGTTCCGAGGGCTGAGAGGGTTTACAAAACAGGTAACCTTTCTCAAGACATGTGTACACG-TCTGTATGAGAGATGAATGGTGGCCTGGTATAGAGACAGACAGACGGTGAGAGATGGGTGGATAGATATCCCAAGGGAGAGAGAC------------------AGAGAGAGAGAGGTGTGTGTGTGCATGTGTG----------------CACTC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1231765 764 - 2905041 ------------------------CTTACCTCCCTGTCTTTC-CCctctcttgctctccccctcccttttcctctctcttcttatctctttttctc------tctctcttattcactcctcca--ctctctctctctACCCTACCAGCAC---CTGAAC------TT-AATGAAAATTCCAAACACGTGTATCCGTGCAGAATGCGTGATTC------CCTCCCTGTGTTCCTCAGCTGGCCGCAAGAATTATTAAGGCAAGTC----CAGTTTTCTTTCACTGAATGTCCCCACCC-CTGGCTTGAGTTTCATCTGCTGTC----CCCTGCTCTTG-ACCAGGTCCACACCCCCC--TAGATTATTTTGAAGCACATCCCCGCTCCCAGCCCCCACTTCCCTAGACATCCCCAGAAATCGCCCTTTGACTTGCTGTGATGTTGCAGCTCTCCCACAGACAAAGCTGGCAGCTGCCCAGTAAGACCCTCCATGGCA--------------TTCCACCTGGTAAGTAGGAGGGGGCACCCTTGGGACCTGACACTCAGCTTCTCATTTGCCTTTTGGAGAAGGTGTTGTAATCTGGTATGGCGTGACAGCAAGTGACTTATCGTGATTTTAGTGGAACTAGGGTTCCGAGGGCTGAGAGGGTTTACAAAATGGGTAACCTTTCTCAAGACACGCGTACATG-TCTGTATGAGAAATGAGTGATGACTTGGTATAGAGACAGACAGATGGTGAGAGATGGATGGATAGATATCCTAagggagagagacagagagagagagagagagagagagagagagagagGTGTGTGCATGTGTG----------------CACTC i saiBol1.JH378287 C 0 C 0 s aotNan1.NW_018494782v1 1420299 736 - 1813869 --------------------------------cttatct----ccctctcttgctctccctctccctttccctctctcttcttatctctttttctc------tctctcttattcactcctcca--ccctctctctctcCCCTACCAGCAC---CTGAAC------TTAACTGAAAATTCCAAACACGTGTACCCGTGCAGAACGCGTGATTC------CCTCCCTGTGCTCCTCAGCTGGATGCAAGAATTATTGAGACAAGTC----TGGTTTTGTTTCGCTGAATGTCCCCACCC-CTGGCTCGGGTTTCATCTGCTGTC----CCCTGCTCTTG-ACCAGGTCCACACCTCCC--TAGATTATTTCGAAGCACATCTCCGCTCCCAGCCCCCACTTCCCTAGACATCCCCAGAAATCGCCCTTTGATTTGCCGTAATGTCACAGTTCTCCCACAGATGAAGTCGGCAGCTGCCCAGTAAGACTCTCCCAGGCA--------------TTCCACCTGGTAAGCACGAGGCGGCACCCTTGGGACCTGACACCTAGCTTCTCATTCGCCTTTTGGAGAAGGTGTTGTAATCTGGTATGGTGTGACGGCAAGTGACTTAACGTGATTTTAGTGGAACTAGGGTGCCGAGGGCTGAGGGGGTTTACAAAACGGGTAACCTTTCTCAAGACACACGTACACG-TCTGTGTGAGAGATGAATGGTGACCTGGTATAGAGACAGAC--ATGGTGAGAGACGGATGGATAGATATCCTAagggagagagac----------------agagagagagagagGTGTGTGTGTGCATGTGTG----------------CACTC i aotNan1.NW_018494782v1 C 0 C 0 s canFam3.chr1 56099646 584 + 122678785 ----------------------------------------------------------------------------------------------------------------------CTGTC--CTTCCTCTCCCTCCCCTGCCACCATTGCCTAAGCACCCTGTT-ATCAAAAATTCCAAACACACACCCTACTAAGGATA--GTAGTGCAGTGAACCCCAACGCACCCAGCACTTGGTGGTGACAATGCTTG-GCCTGGGC----CAGCTTCGTTT----------------------------------TCTGCTAAT----GCGCACCC----ACCAG--TGAGCCCTCCC--TGGATCACGGTGGAGCAC------------------------------------------TCATCCTTTGGCTTGCCTTCATGTGGTCGATTTCCTGCAGGTGAAGTTGG--------TGGAAAA-------CCCAGAAGCCTGCCCAAGGCCCCCAGCTGGTAAATGCCAGGTGACACCATTGGGACCTGACATCTACCTTCTCTCTTGGCCCTTGGAGATGGAGCTCCAATCTGTCTCCAGGTGACAGCAGATGACTTAACATGAATGCAAGCAAGGTAAGGTTCAGAGAGCTGAGAGCTTTTCCAGAACTGGTGAGCTCCCTTTAG---TGTTCTCACGATATGTATGATAGACG----GCGTCCTGAC-TAG--------AGAGGATAGTCGATCTACACACAGACTCT------AAGAAtgtg------------------tgtgtgtgtgtg-tgtgtgtgtgtgtgtgtgtgtgtatgAGAGTATATACTC i canFam3.chr1 C 0 C 0 e cebCap1.NW_016107695v1 1183203 1674 - 2164891 I e dasNov3.JH569188 483526 1638 + 760995 I a score=601828.000000 s hg38.chr6_KB021644v2_alt 4224 57 + 185823 TGCTCTAAAGGCTTTCTGTAAAATGCCTCTT-ATTAGAATTTTCTTAGGCAACCTTTT s panTro5.chr6 173458763 57 + 175400573 TGCTCTAGAGGCTTTCTATAAAATGCCTCTT-ATTAGAATTTTCTTAGGCAACCTTTT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171722627 57 + 173848474 TGCTCTAGAGGCTTTCTATAAAATGCCTCTT-ATTAGAATTTTCTTAGGCAACCTTTT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11407152 57 - 12463322 TGCTCTAGAGGCTTTCTATAAAATGCCTCTT-ATTAGAATTTTCTTAGGCAACCTTTT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156233785 58 + 157873769 TGCTCTAGAGGCTTTCTATAAAATGCCTCTTAATTATAATTTTCTTAGGCAATCTTTT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170260155 58 + 172585720 TGCTCTAGAGGCTTTCTATAAAATGTCTCTTAATTATAATTTTCTTAGGCAACCTTTT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169005762 58 - 170955103 TGCTCTAGAGGCTTTCTATAAAATGTCTCTTAATTATAATTTTCTTAGGCAACCTTTT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8293019 58 + 10161646 TGCTCTAGAGGCTTTCTATAAAATGTCTCTTAATTATAATTTTCTTAGGCAACCTTTT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1322461 58 + 3144229 TGCTCTAGAGGCTTTCTATAAAATGTCTCTTAATTATAATTTTCTTAGGCAAGCTTTT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96601893 58 + 98384682 TGCTCTAGGGGCTTTCTATAAAATGTCTCTTAATTATAATTTTCTTAGGCAACCTTTT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8144616 58 - 10857215 TGCTCTAGAGGCTTTCTATAAAATGTCTCTTAATTATAATTTTCTTAGGCAACCTTTT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15540411 58 - 23502949 TGCTCTAGAGGCTTTCTATAAAATGTCTCTTAATTATAATTTTCTTAGGCAACCTTTT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169807235 58 + 171630274 TGCTCTAGAGGCTTTCTATAAAATGTCTCTTAATTATAATTTTCTTAGGAAACCTTTT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1232529 58 - 2905041 TGCTCTAGAGGCTTTCTGTAAAATGTCTCTTAATTATAATTCTCTTAGGCAGCCTTTT i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1184877 58 - 2164891 TGCTTTAGAGGCTTTCTATAAAATGTCCTTTAATTATAATTTTCTTAGGCAACCTTTT i cebCap1.NW_016107695v1 I 1674 C 0 s aotNan1.NW_018494782v1 1421035 58 - 1813869 TGCTCCAGAGGCTTTCTATAAAATGTCTCTTAATTCTAATTTTCTTAGGCTACGTTTT i aotNan1.NW_018494782v1 C 0 I 32 s canFam3.chr1 56100230 57 + 122678785 TGCTCTGAACGCATTCTGTAAGGTATTCCTCAACTCTACGTTT-TTAGGCAGTATTTC i canFam3.chr1 C 0 C 0 e dasNov3.JH569188 483526 1638 + 760995 I a score=23115.000000 s hg38.chr6_KB021644v2_alt 4281 3 + 185823 ATA s panTro5.chr6 173458820 3 + 175400573 ATA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171722684 3 + 173848474 ATA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11407209 3 - 12463322 ATA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156233843 3 + 157873769 ATA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170260213 3 + 172585720 ATA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169005820 3 - 170955103 ATA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8293077 3 + 10161646 ATA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1322519 3 + 3144229 ATA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96601951 3 + 98384682 ATA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8144674 3 - 10857215 ATA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15540469 3 - 23502949 ATA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169807293 3 + 171630274 ACA i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1232587 3 - 2905041 ATA i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1184935 3 - 2164891 ATA i cebCap1.NW_016107695v1 C 0 I 30 s canFam3.chr1 56100287 2 + 122678785 AT- i canFam3.chr1 C 0 C 0 e aotNan1.NW_018494782v1 1421093 32 - 1813869 I e dasNov3.JH569188 483526 1638 + 760995 I a score=117987.000000 s hg38.chr6_KB021644v2_alt 4284 48 + 185823 TTTTACTTTGCCATAGCTAAGCCCTTATGTAAATATGCTTTCAAA-AAT s panTro5.chr6 173458823 48 + 175400573 TTTTACTTTGCCATAGCTAAGCCCTTATGTAAATATGCTTTCAAA-AAT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171722687 48 + 173848474 TTTTACTTTGCCATAGCTAAGCCCTTATGTAAATATGCTTTCAAA-AAT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11407212 48 - 12463322 TTTTACTTTGCCATAGCTAAGCCCTTATGTAAATATGCTTTCAAA-AAT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156233846 48 + 157873769 TTTTACTTTGCCATAGCTAAGCCCTTATGTAAATATGCTTTCAAA-AAT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170260216 30 + 172585720 TTTTACTTTGCCATAGCTCAGTCCTTATG-------------------T i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169005823 30 - 170955103 TTTTACTTTGCCATAGCTCAGTCCTTATG-------------------T i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8293080 30 + 10161646 TTTTACTTTGCCATAGCTCAGTCCTTATG-------------------T i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1322522 30 + 3144229 TTTTACTTTGCCATAGCTCAGCCCTTAAG-------------------T i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96601954 30 + 98384682 TTTTACTTTGCCATAGCTCAGCCCTTAAG-------------------T i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8144677 30 - 10857215 TTTTACTTTGCCATAACTCAGCCCTTAAG-------------------T i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15540472 30 - 23502949 TTTCACTTTGCCATAGCTCAGCCCTTGTG-------------------T i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169807296 29 + 171630274 --------------GGCAAAGTATTTTTGAAAGCATGTTTACA------ i calJac3.chr4 C 0 I 1 s saiBol1.JH378287 1232590 29 - 2905041 --------------GGCAAAGTATTTTTGAAAGCATGTTTATT------ i saiBol1.JH378287 C 0 I 1 s canFam3.chr1 56100289 49 + 122678785 CCCCCTTTTGCCCTAACTAAGCCCTTTTAAGAATATGACTTAAAACAAT i canFam3.chr1 C 0 C 0 e aotNan1.NW_018494782v1 1421093 32 - 1813869 I e cebCap1.NW_016107695v1 1184938 30 - 2164891 I e dasNov3.JH569188 483526 1638 + 760995 I a score=7098.000000 s hg38.chr6_KB021644v2_alt 4332 1 + 185823 A s panTro5.chr6 173458871 1 + 175400573 A i panTro5.chr6 C 0 C 0 s panPan2.chr6 171722735 1 + 173848474 A i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11407260 1 - 12463322 A i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156233894 1 + 157873769 A i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170260246 1 + 172585720 A i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169005853 1 - 170955103 A i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8293110 1 + 10161646 A i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1322552 1 + 3144229 A i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96601984 1 + 98384682 A i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8144707 1 - 10857215 A i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15540502 1 - 23502949 A i colAng1.NW_012114488v1 C 0 C 0 s canFam3.chr1 56100338 1 + 122678785 A i canFam3.chr1 C 0 C 0 e saiBol1.JH378287 1232619 1 - 2905041 I e aotNan1.NW_018494782v1 1421093 32 - 1813869 I e cebCap1.NW_016107695v1 1184938 30 - 2164891 I e calJac3.chr4 169807325 1 + 171630274 I e dasNov3.JH569188 483526 1638 + 760995 I a score=813136.000000 s hg38.chr6_KB021644v2_alt 4333 83 + 185823 AATATCCAGTTGATGACTTCACCATTGAGCTTGCTGTACTAAAACATGTGCTAACTCAAATTCATCAGTttttttcagctgta s panTro5.chr6 173458872 83 + 175400573 AATATCCAGTTGATGACTTCACCATTGAGCTTGCTGTACTAAAACATGTGCTAACTCAAATTCATCAGTttttttcagctgta i panTro5.chr6 C 0 C 0 s panPan2.chr6 171722736 83 + 173848474 AATATCCAGTTGATGACTTCACCATTGAGCTTGCTGTACTAAAACATGTGCTAACTCAAATTCATCAGTTTTTTCCAGCTGCA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11407261 83 - 12463322 AATATCCAGTTGATGACTTCACCATTGAGCTTGGTGTACTAAAACATGTGCTAACCCAAATTCATCAGTttttttcagctgta i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156233895 81 + 157873769 AATATCCAGTTGATGACTTCACCATTGAGCTTGGTGTACTAAAACATGTGCTAATTCAAA-TCATCAGtttttt-cagctgta i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170260247 82 + 172585720 AATATCCAGTTGATGACTTCACCATTGAGCTTGGTGTACTAAAACATGTGCCAACTCAAATTCATCAGTTTTTT-CAGCTGTA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169005854 82 - 170955103 AATATCCAGTTGATGACTTCACCATTGAGCTTGGTGTACTAAAACATGTGCCAACTCAAATTCATCAGTTTTTT-CAGCTGTA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8293111 82 + 10161646 AATATCCAGTTGATGACTTCACCATTGAGCTTGGTGTACTAAAACATGTGCCAACTCAAATTCATCAGTTTTTT-CAGCTGTA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1322553 82 + 3144229 AATATCCGGTTGATGACTTCACCATTGAACTTGGTGTACTAAAACATGTGTTAACTCAAATTCATCAGTTTTTT-CAGCTGTA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96601985 82 + 98384682 AATATCCAGTTGACGACTTCACCATTGAGCTTGGTGTACTAAAACATGTGCCAACTCAAATTCATCAGTTTTTT-CAGCTGTA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8144708 82 - 10857215 AATATCCAGTTGATGACTTCACCATTGAGCTTGGTGTACTAAAACATGTGCTAACTCAAATTCATCAGTTTTTT-CAGCTGTA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15540503 82 - 23502949 AATATCCAGTTGATGACTTCACCATTGAGCTTGGTGTACTAAAACATGTGCTAACTCAAATTCATCAGTTTTTT-CAGCTGTA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169807326 82 + 171630274 AATGTCCAGTCGATGACTTGGCCATCGAGCTTGCTGTACCGAAACATGCGCTAACTCAAATTCATCCGTTTTCT-CAGtttta i calJac3.chr4 I 1 C 0 s saiBol1.JH378287 1232620 81 - 2905041 AACATCCAGTTGATGACTTCA-CATTGAGCTTGGTGTACTGAAACATGTGCTAATTCAAATTCATCATTTTTTT-CAGtttta i saiBol1.JH378287 I 1 C 0 s cebCap1.NW_016107695v1 1184968 79 - 2164891 AATATCCAGTTGATGACTTCA-CATTGAGTTTGGGGTACTGAAAC--GTGCTAACTCAAATTCATCCGTTTTTT-CAGtttta i cebCap1.NW_016107695v1 I 30 C 0 s aotNan1.NW_018494782v1 1421125 81 - 1813869 AATATCCAGTTGATGACTTCA-CGTTGAGCTTGGTGTACTGAAACATGTGCTAACTCAAATTCATCAGCTTTTT-CCGtttta i aotNan1.NW_018494782v1 I 32 C 0 s canFam3.chr1 56100339 83 + 122678785 CATATACAGTTGATGACTTTATCTTTGGATTTGGCTGATGAAAACAGGAGCTAAGGAACATTCACAAATTTTTCATATTTTTA i canFam3.chr1 C 0 C 0 e dasNov3.JH569188 483526 1638 + 760995 I a score=10235189.000000 s hg38.chr6_KB021644v2_alt 4416 1115 + 185823 ttgaagtacaattgacaaataaaaattatatatacttataatgtacaatgcgatgttccaatacgtgtgtacattgtgaaatgattaaatcaagtgaattaacatatctatcatccatatact-atgactttgtcttgtgagaacatttaaaatattctttcttagcaattttcaaatatccaatacattattattaattatggtcaccatgctgtatggagatcacgacttactcctcctgtctcactgaaactctgttccctttgaccaacatctccccttttcccatgtagccactgccttcacccaggccct---------------actctctgcctctgagtttgac-ttttttagattccatttataagtgagattatgcagcatttgtctttctgtgcctggcttatttcgcttaacataatgtcctccaggtttgttcatattgtggcaaatgacaggatttcactcttttttaaggctgcataatatttcattgtatgtatgtactaccttttctttatccattcatctgtgatggacacttaggtggattccaggttgtggtcattgtgaacagtgttgcagtgaacatggggatgtagatatctcctcaatgcattga-tttcaattcctatggagatacatatccagaggtcaggctgtggg-actatatggtagttctagttttaa-ttttttgaggatcctccatagtgatcaccataatggctggactaacgtacagttgcatccgcagtgtg-taagagttctctttcttccatgccttcactaacatttaacttttttgagaatggtcattctgacttcagtgagatgatattttattgtggttttaatctatatgtccctaatgatgagagatgttgagtattcaaaaatgtacctgttgaccattt-----gtatatcttcttttgagaagtgtttgttcatgttctttgtccgcattttaattgggttatttgcatttttgctactgagctgATATGCC-AAAAACacaagatgaaggactaaaatcatgtgatgatcacagcagattcagaaaaagcgtttggtaaaattcaacatcctttcatgattaaaagccctcaacaacttaggtgtagaaggaa s panTro5.chr6 173458955 1131 + 175400573 ttgaagtacaattgacaaataaaaattatatatacttataatgtacaatgcgatgttccaatacgtgtgtacattgtgaaatgattaaatcaagtgaattaacatatctatcatccatatacttatgactttgtcttgtgagaacatttaaaatattctttcttagcaattttcaaatatccaatacattattattaattatggtcaccatgctgtatggagatcacgacttactcctcctgtctcactgaaacgctgttccctttgaccaacatctccccttttcccatgtagccactgccttcacccaggccctggtagccaccgtcctactctctgcctctgagtttgac-ttttttagattccatttataagtgagattatgcagcctttgtctttctgtgcctggcttatttcgcttaacataatgtcctccagatttgttcatattgtggcaaatgacaggatttcactcttttttaaggctgcataatatttcattgtatgaatgtactaccttttctttatccactcatctgtggtggacacttaggtggattccaggttgtggccattgtgaacagtgtttcagtgaacatggggatgtagatatctcctcaatgcattga-tttcaactcctttggagatacatatccagaggtcaggctgtggg-actatatggtagttctagttttaa-ttttttgaggatcctccatagtgatcatcataatggctggactaacgtacagttgcatccgcagtgcg-taagagttctctttcttccatgccttcactaacatttaacttttttgataatggtcattctgacttgagtgagatgatattttattgtggttttaatctatatgtccctaatgatgtgagatgttgagtattcaaaaatgtacctgttgaccattt-----gtatgtcttcttttgagaagtgtttgttcatgttctttgtccgctttttaattgggttatttgcatttttgctactgagctgATATGCC-AAAAATacaagatgaaggactaaaatcatgtgatgatcacagcagattcagaaaaagcgtttggtaaaattcaacatcctttcatgactacaagccctcaacaacttaggtgtagaaggaa i panTro5.chr6 C 0 C 0 s panPan2.chr6 171722819 1113 + 173848474 TTGAAGTACaattgacaaataaaaattatatatacttataatgtacaatgcgatgttccaatacgtgtgtacattgtgaaatgattaaatcaagtgaattaacatatctatcatccatatacttatgactttgtcttgtgagaacatttaaaatattctttcttagcaattttcaaatatccaatacattattattaattatggtcaccatgctgtatggagatcacgacttactcctcctgtctcactgaaacgctgttccctttga------------------ccatgtagccactgccttcacccaggccctggtagccaccgtcctactctctgcctctgagtttgac-ttttttagattccatttataagtgagattatgcagcctttgtctttctgtgcctggcttatttcgcttaacataatgtcctccagatttgttcatattgtggcaaatgacaggatttcactcttttttaaggctgcataatatttcattgtatgaatgtactaccttttctttatccactcatctgtgatggacacttaggtggattccaggttgtggccattgtgaacagtgttgcagtgaacatggggatgtagatatctcctcaatgcattga-tttcaactcctttggagatacatatccagaggtcaggctgtggg-actatatggtagttctagttttaa-ttttttgaggatcctccatagtgatcatcataatggctggactaacgtacagttgcatctgcagtgcg-taagagttctctttcttccatgccttcactaacatttaacttttttgataatggtcattctgacttgagtgagatgatattttattgtggttttaatctatatgtccctaatgatgtgagatgttgagtattcaaaaatgtacctgttgaccattt-----gtatatcttcttttgagaagtgtttgttcatgttctttgtccgcgttttaattgggttatttgcatttttgctactgagctgATATGCC-AAAAATacaagatgaaggactaaaatcatgtgatgatcacagcagattcagaaaaagcgtttggtaaaattcaacatcctttcatgactacaagccctcaacaacttaggtgtagaaggaa i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11407344 1131 - 12463322 ttgaagtacaattgacaaataaaaattatatatacttataatgtacaatgtgatgttccaatatgtgtgtacattgtgaaatgattaaatcaagtgaattaacatatctatcatccatatacttatgactttgtcttgtgagaacatttaaaatattctttcttagcaattttcaaatatccaatacattattattaattatggtcaccatgccgtatggagatcacgacttactcctcctgtctcactgaaactctgttccctttgaccaacatctccccttttcccatgtagccactgccttcacccaggccctggtagccaccgtcctactctctgcctctgagtttgac-ttttttagattccatttataagtgagattattcagcctttgtctttctgtgcctggcttatttcgcttaacataatgtcctccagatttgttcatattgtggcaaatgacaggatttcactcttttttaaggctgcataatatttcattgtatgtatgtactaccttttctttatccattcatctgtgatggacacttaggtggactccaggttgtggccattgtgaacagtgttgcagtgaacatggggatgtagatatctcctcaatgcattga-tttcaactcctttggagatacatatccagaggtcaggctgtggg-actatatggtagttctattttgaa-ttttttgaggatcctccatagtgatcaccataatggctggactaatgtacagttgcatctgcagtgcg-taagagttctctttcttccatgccttcactaacatttaactttgttgataatggtcattctgacttgagtgagatgatattttattgtggttttaatctatatgtccctaatgatgagagatgttgagtattcacaaatgtacctgttgaccgttt-----gtatatcttcttttgagaagtgtttgctcatgttctttgcccgctttttaattgggttatttgcatttttgctactgagttgATATGCC-AGAAACacaaaatgaaggactaaaatcatatgatgatcacaacagattcagaaaaagcatttggtaaaattcaacatcctttcatgattaaaagccctcaacaacttaggtgtagaaggaa i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156233976 1132 + 157873769 ttgaagtacaattgacaaatcaaaattgtatatatttataatgtacactgtgatgttccaatatgtgtgtacattgtgaaatgattaaatcaagtgaattaacatatctatcagccatatactgatgattttgtcttgtgagaacatttaaaatattctttcttagcaattttcaaatatccaatacattattattaatgatggtcaccatgctgtatggagatcacgacttactcctcctgtctcactgaaactctgttccctgtgaccaacatctcccctttccccatggagctactgccctcacccaggccctggtagccaccatcctactctctgcctctgagtttgac-ttttttagattccatttataagtgagattatgcagcctttgtctttctgtgcctggcttattttgcttaacataacgtcctccagatttgttcatattgtgccaaatgacaggatttcactcttttttaaggctgcataatatttcattgtatgtatgtactaccttttctttatccattcatctgtgatggacacttaagtggagttcatgtcgtggccattgcgaacagtgttgcagtgaacatggggatgtagatatctcctcaatgcattgattttcaattcctttgcagatacatatccagaggttaggctgtggg-actatatggtagttctatttttaa-ttttttgaggatcctccatagtgttcaccataatggctggattaacgtacagttgcatccacagtgcc-taagagttctctttcttccatgccttcactaatgtttaacttttttgataatgatcattctgacttgagtgagatgatattttattgtggttttcatctatatgtccctaatgatgagagatgttgagtattcaaaaatgtacctgttgaccattt-----gtatagcttcttttgagaaatgcctgttcatgttctttgtccactttttaattgggttatttgcatttttgctactgggttgatatgcc-aaaaaaacaaaatgaaggactaaaatcgtatgattatcacaatagattcagaaaaagcatttgacaaaattcaacatcctttcatgattaaaagccctcaacaacttaggtgtagaaggaa i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170260329 1132 + 172585720 CTGAAGTACaattgacaaataaaaattatatatatttataatgtataatgcgacgttccaatatgtgtgtacattgtggaatgattaaatcaagtgaatcaacatatctatcatccatatacttattattttgtcttgtgagaacatttaaaatattctctctcagcaattttcaaatatccaatacattattattaattatggtcaccatgctttatggagatcacgacttactcctcctgtctcactgaaactctgttccctttggccaacgtctgccctttccccgtgtagctgctgccctcacccaggtcctggtagccaccaccctactctctgcctctgagtttgac-tttttaaggttccacttataagtgagattatgcagcctttgtctttctgtgcctggcttatttcgcttaacataacgtcctccagatttgttcatattgtaacaaatgacaggatttcactcttttttgaggctggatagtatttcattgtatgtatgtactaccttttctttatccattcatcggtgatggacacgtaggtggattccatgtcatggccgttgtgaattgtgttgcagtgaacatgggaatgtagatgtctcctcaatgcattga-tttcaattcct-tggagatacgtatccagaagtgaggctgtggggactatatggtggttctatttttaatttttttgaggatcttccatagtgttcaccataatggctggactaacgtacagttgcatccacagggtg-taagagttctctttcttccacgccttcactaacatttaacttttttgataatggtcattctgacttgagtgagatgacattttattgtagttttaatctataggtccctaatgatgagagatgttgaatattcaaaaatgtacctgttgactattt-----gtatatcttcttttgagaaatgtctgctcatgttctttgtccactttttaattgggttatttgcatttttgctactgagttgatatgcc-aaaaaaacaaaatgaaggactaaaatcatatgattatcacaatagattcaggaaaaacatctgacaaaattcaacatcctttcatgattaaaagccctcaacaacttaggtgtagaaggaa i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169005936 1132 - 170955103 CTGAAGTACaattgacaaataaaaattatatatatttataatgtataatgcgacgttccaatatgtgtgtacattgtggaatgattaaatcaagtgaatcaacatatctatcatccatatacttattattttgtcttgtgagaacatttaaaatattctctctcagcaattttcaaatatccaatacattattattaattatggtcaccatgctttatggagatcacgacttactcctcctgtctcactgaaactctgttccctttggccaacgtctcccctttccccgtgtagctgctgccctcacccaggtcctggtagccaccaccctactctctgcctctgagtttgac-tttttaagattccacttataagtgagattatgcagcctttgtctttctgtgcctggcttatttcgcttaacataacgtcctccagatttgttcatattgtaacaaatgacaggatttcactcttttttgaggctggataatatttcattgtatgtatgtactaccttttctttatccattcatcggtgatggacacgtaggtggattccatgtcatggccgttgtgaatagtgttgcagtgaacatgggaatgtagatgtctcctcaatgcattga-tttcaattcct-tggagatacgtatccagaagtgaggctgtggggactatatggtggttctatttttaatttttttgaggatcttccatagtgttcaccataatggctggactaacgtacagttgcatccacagtgtg-taagagttctctttcttccacgccttcactaacatttaacttttttgataatggtcattctgacttgagtgagatgacattttattgtagttttaatctataggtccctaatgatgagagatgttgaatattcaaaaatgtacctgttgactattt-----gtatatcttcttttgagaaatgtctgttcatgttctttgtccactttttaattgggttatttgcatttttgctactgagttgatatgcc-aaaaaaacaaaatgaaggactaaaatcatatgattatcacaatagattcaggaaaaacatctgacaaaattcaacatcctttcatgattaaaagccctcaacaacttaggtgtagaaggaa i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8293193 1132 + 10161646 CTGAAGTACaattgacaaataaaaattatatatatctataatgtataatgcgacgttccaatatgtgtgtacattgtggaatgattaaatcaagtgaatcaacatatctatcatccatatacttattattttgtcttgtgagaacatttaaaatattctctctcagcaattttcaaatatccaatacattattattaattatggtcaccatgctttatggagatcacgacttactcctcctgtctcactgaaactctgttccctttggccaacgtctcccctttccccgtgtagctgctgccctcacccaggtcctggtagccaccaccctactctctgcctctgagtttgac-tttttaagattccacttataagtgagattatgcagcctttgtctttctgtgcctggcttatttagcttaacataacgtcctccagatttgttcatattgtaacaaatgacaggatttcactcttttttgaggctggataatatttcattgtatgtatgtactaccttttctttatccattcatcggtgatggacacgtaggtggattccatgtcatggccgttgtgaatagtgttgcagtgaacatgggaatgtagatgtctcctcaatgcattga-tttcaattcct-tggagatacgtatccagaagtgaggctgtggggactatatggtggttctatttttaatttttttgaggatcttccatagtgttcaccataatggctggactaacgtacagttgcatccacagtgtg-taagagttctctttcttccacgccttcactaacatttaacttttttgataatggtcattctgacttgagtgagatgacattttattgtagttttaatctataggtccctaatgatgagagatgttgaatattcaaaaatgtacctgttgactattt-----gtatatcttcttttgagaaatgtctgttcatgttctttgtccactttttaattgggttatttgcatttttgctactgagttgatatgcc-aaaaaaacaaaatgaaggactaaaatcatatgattatcacaatagattcaggaaaaacatctgacaaaattcaacatcctttcatgattaaaagccctcaacaacttaggtgtagaaggaa i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1322635 1132 + 3144229 CTGAAGTACaattgacaaataaaaattgtatatatttataatgtataatgcgacgttccaatatgtgtgtatattgtggaatgattaaatcaagtgaatcaacatatctatcatccatatacttattattttgtcttgtgagaacatttaagatattctctctcagcaattttcaaatatccaatacattgttattaattatggtcaccatgctttatggagatcacgacttactcctcctgtctcactgaaactctgttccctttggccaacgtctcccctttccccgtgtacctgctgccctcacccaggtcctggtagccaccaccctcctctctgcctctgggtttgac-tttttaagattccacttataagtgagattctgcagcctttgtctttctgtgcctggcttatttcgcttaacgtaacgtcctccagatttgttcatattgtaacaaatgacaggatttcactcttttttgaggctggataatatttcattgtatgtatgtaccaccttgtctttatccattcatcggtgatggacgcgtaggtggattccatgtcatggccgttgtgaatagtgttgcagtgaacatgggaatgtagatgtctcctcagtgcattga-tttcaatgcct-cggagatacgtatccagaagtgaggctgtggggactatatggtggctctgtttttaatttttttgaggctgctccacagtgttcaccataatggctggactaacgtagagttgcatccacagtgtg-taagagctctctttcttccacgccttcactagcatttaacttttttgataatggtcgttctgacttgagtgagatgatattttatggtggttttaatctatacatccctaatgatgagagttgctgaatattcaaaaatgtacctgttgactattt-----gtatatcttcttttgagaaatgtctgttcgtgttctttgtccactttttaattgggttatttgcatttttgctactgagttgatatgcc-aaaaaaacaaaatgaaggactaaaatcatatgattattacaatagattcaggaaaaacatttgacaaaattcaacatcctttcatgattaaaagccctcaacaacttaggtgtagaaggaa i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96602067 1131 + 98384682 CTGAAGTACaattgacaaataaaaattatatatatttataatgtataatgcgacgttccaatatgtgtgtacattgtggaatgattaaatcaagtgaatcaacatatctatcatccatatacttattattttgtcttgtgagaacatttaaaatattctatctcagcaattttcaaatatccaatacattattattaattatggtcaccatgctttatggagatcacgacttactcctcctgtctcactgaaactctgttccctttggccaacatgtcccctttccccatgtagctgctgccctcacccaggtcctggtagccaccaccctactctctgcctctgagtttgac-tttttaagattccacttataagtgagattatgcagcctttgtctttctgtgcctggcttatttcgcttaacataacgtcctccagatttgttcatattgttacaaatgacaggatctcactcttttttgaggctggataatatttcattgtatgtatgtaccaccttgtctttatccattcatcgttgatggacacttaggtggattccatgtcatggccgttgtgaatagtgttgcagtgaacatgggaatgtagacgtctcttcaatgcattga-tttcaattcct-tggagatgcgtatccagaagtgaggctgtgggaactatatggtggttctattgttaatttttttgaggatcctccatagtgttcaccataatagctggactaacgtacagttgcatccacagtgtg-taagagttctctttcttccacgccttcactaacatttaacttttttgataatggtcattctgacttgagtgagatgatattttattgtggttttaatctatacatccctaatgatgagagatgttgaatattcaaaaatgtacctgttgactattt-----gtatatcttcttttgagaaatgtctgttcatgttctttgtccactttttaattgggttatttgcatttttgctactgagttgatatgcc-aaaaaaacaaaatgaaggactaaaatcatatgattattacaatagattcagaaaaaa-atttgacaaaattcaacatcctttcatgattaaaagccctcaacaacttaggtgtagaaggaa i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8144790 1098 - 10857215 CTGAAGTACaattgaaaaataaaaattatatatatttataatgtataatgcgacgttccaatatgtgtgtacattgtggaatgattaaatcaagtgaatcaacatatctatcatccatatacttattattttgtcttgtgagaacatttaaaatattctctctcagcaattttcaaatatccaatacattgttattaattatggtcaccatgctttatggagatcaggacttactcctcctgtctcactgaaactctgttccctttggccaacatctcccctttccccgtgtagctgctgccctcacctaggtcctggtagccaccaccctactctctgcctctgggtttgac-tttttaagattccacttataagtgagattatgcagcctttatctttctgtgcctggcttatttcgcttaacgtaacgtcctccagatttgttcatattgttacaaatgacaggatttcactcttttttgagactggataatatttcattgtatgtatgtaccaccttgtctttatcccttcatcggtgatggacacgtaggtggattccatgtcatggccgttgtgaatagtgttgcagtgaacatgggaatgtagatgtctcctcagtgcattga-tttcaatgcct-cggagatacgtatccagaagtgaggctgtggggactatatagtggttctgtttttaatttttttgaggctcctccacagtgttcaccataatggctggactaacgtacagttgcatccacagtgtg-taagagttctctttcttccacgccttcactagcatttaacttttttgataatggtcattctgacttgagtgagatgatattttattgtagttttaatctataggtccctaatgatgagagatgttgaatattcaaaaatgtacctgttgactattt-----gtataccttcttttgagaaatgtctgttcatgttctttgtccactttttaattgggttatttgcatttttgctactgagttgatatgcc-aaaaaaacaaaatgaaggactaaaatcatatgattattacaatagattcag----------------------------------gattaaaagccctcaacaacttaggtgtagaaggaa i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15540585 1110 - 23502949 CTGAAGTACaattgacaaataaaaattgtatatatttataatgtacaatgcagtgttccaatatgtgtgtacattgtggaatgattaaatcaagtgaatcaacatatctatcatccatatacttattattttgtcttatgagaacatttaacatattctctcttagcaattttcaaatatccaatacattattattaattatggtcaccatgctttatggagatcacgacttactcctcctgtctcactgaaactctgttccctttggccaacatctcccctttccccatgtagccactgccctcacccaggtcctggtagccaccaccctactctctgcctctgagtttgac-tttttaagattccacttataagtgagattatgcagcctttgtctttctgtgcctggcttattttgcttaacgtaacgtcctccagatttgttcatattgttacaaatgataggatttcactcttttttgaggctggataatgtttcattgtatgtatgtactaccttttctttatccattcatcggtgatggacacttaggtgggttccatgtcatggccatcgtgaattg-----------------------agatgtctcctcaacgcattga-tttcaattcct-tggagatacgtatccagaagtgagactgtggggactatatggtggttctatttttaatttttttgaggctcctccatagtgttcaccataatggctggactaacgtacagttgcatcctcagtgtg-taagagttctctttcttccacgccttcactaacatttaacttttttgataatggtcattctgacttgagtgagatgatattttattgtggttttaatctatatgtccctaacgatgagagatgttgaatattcaaaaatatacctgttgactcttt-----gtatatcttcttttgagaaatgtctgttcatgttctttgtccactttttaattgggttatttgcatttttgctactgagttgATATGCCAAAAAAaacaaaataaaggactaaaatcatatgattatcacaatagattcagaaaaaacatttgacaaaattcaacatcctttcatgattaaaagccctcaacaacttaggtgtagaaggaa i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169807408 1111 + 171630274 ttgaagtataattgacaaataaaaattgtatctattcat-atgtacaatgagatgttccaatatgtgtgtaccacgtgaaatgattaaatcaggtggattaacatatctaccattcatatgcttattattttgtactgtgagaacatttcaaatattccttcttagcaattttcaaacatccaatacattattattaattatggtcagcacgctgtacagagatcacgacttactcctctgctctgcctgaagctccattccctttaaccagcatc-cccccgtccccatgtggcccctgccctcacccagggcctggtagcctccattctactctgtgcctctgagtttgactttttttagattccacttataagtgagactatgtagcctttgtctttctgtgccatacttatttcacctaacgtaacatcccccaggtctggccatgttgttgcaaatgacaggacttcattcttctttaaggttgcatagtatttcattgtattcacatcctgcatctgctctatccactcatctgtgatggacagtcagggtgattccgtgccttggccgttgtgaacagtgtttcagtgaacacgggaacgtcgacat---ctccctgtattga-tttcaattcctttggagatactgatccagaagtgagactgtggg-g-tgtacggcagttcta-ttttaa-tattttgagggaccttcatagagttcac-----------------tgtgcgcttacatctgcggcg---taggagagctcttcctcccacgccatcactaacagctgacttttttgataaccgtcgttctgacttgagtgagatgatagtttattgtggttttgatttgtatttccctaaagatgagagaagttgaatatttaaaaatgtacttcttgaccatttgcactgtatgtcttctttttagaaatgtctgttcatgttctttgtccactttttaattgggttatttgcattgttgctactgagttgacatgcc-aaattaacaaaattaaggacaaaagtcctgtgattatcacaatagattcagaaaaagcacccaacaaaatttcacatcgtttcattattaaaaaccctcaacaacttaggggtagaaggaa i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1232701 1115 - 2905041 ttgaattataattgacaaataaaaattgtatctattcataatgtacaatgagatgttccaatatgtgtgtacagtgtgaaatgatttaattgggtgggttaacatatcta-cattcatatgcttattattttgtattgtgagaatatttcaaatattccttcttagcaattttcaaacatccaatac---attattaattatggtcaccatgctgtatggagatcacgacttactcttccgctctgcctgaagctccattccctttaaccagcatctcccctttccccatgtggcccctgccctcacccagggcctggtaccctccattctactctctgcctctgagtttgac-ttttttagattacacttataagtgagattatgtagcatttgtctttctgtgccatacttattttgcctaagataacatcctccgggtctggccatattgttgcaaatgacaggatttcattctttttaaaggttgcataatatttccttgtatgcatgtactacatctgctctatccattcatctgtgatgaagagttaggttgattccgtgtcttgaccattgtgaacagtgtttcagtgaacatgggaacatagatattgcctcactgtattga-tttcaattcctttggagatatttatccagaagtgagactctggg-actatacagcagttcgatttttaa-tattttgaggagtctttatagtgtttac-----------------tgtagagttacatctgcggggcgttaagagttctctttcttccacatcttcactaacagctaactttttttataaccgtcattctgacttgagttagatgatattttattgtggttttaatttgtatttccctaataatgagaaaagttgaatatttaaaaatgtacttgttgtccatttgtactgtatgccttcttttcagaaatgtctcttcatcttctttgtccactttttaattgggttatttgcatttttgctactgagttgatatgcc-aaattgacaaaattaaggacaatagttatatgattatcacaataaattcagaaaaagcactcgacaaaattccacatcctttcatgattaaaaaccctcaacaactt-ggggtagaaggaa i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1185047 1112 - 2164891 ttgaaatataattgacaaataaaaattgtatctattcataatgtacaatgagatgttccagtatgtgtgtacatcgtgaaatgattaaatcgggtggattaacatatcta-cattcatatgcttattattttgtattgtgagaacattttaaatattccttctaagtaattttcaaacatccaatacattattattaattatggtcaccatgctgtatggagatcacgacttact------ctctacctgaagctccattccctttaaccagcatgtcctctttccccatgtggcctctgccctcacccagggcctggtagcctccattctactctctgcttctgagtttgac--tttttagattccacttataagcgagattatgtagcctttatctttctgtgccatacttattttgtgtaacataacatcctccgggtctggccatattgttgcaaatgacaggatttcattcttttttaaggttgcataatatttcattgtgtgcatgtactacatcggctctatccattcgtctgtgatggacggttaggttaattccatgtcttggccattgtgaacagggtttcagtgaacacgggaacgtagatatctcctcactgtattga-tttcaattcctttggagatatttatccagaagtgagactatggg-gctctatggcagttctatttttaa-tattttgaggagtctttatagtgtttac-----------------tgtacagttacatctgcagggcgttaagtgttctctttcttcctcaccttcactagcagctaacttttttgataatcgtcattctgacttgagtgagatgatattttattgtggttttaatttgtatttccctaatgatgagagaagttgaatattcaaaaatatacttgttgaccatttgtactgtatgtcttctttttagaaatgcctggtcatgttctttgtccactttttaattgggttatttgcatttttgccgctgagttgatatgcc-aaattaacaaaattaaggacaaaagtcatatgattatcacaatagattcagaaaaatcacccgacaaaattccacatcctttcatgattaaaaaccctcaacaacttaggggtagaaggaa i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1421206 1111 - 1813869 ttgaagtataattgacaaataaaaattgtatctattcataatgtacaatgagatgttccaatacgtgtgtacagtgtgaaatgattaaatcgggtggataaacatatctaccagtcatatgcttattattttgtattgtgagaacatttcaaatattccttcttagcaattttcaaacttccaatacattattattaattatggtcaccacgctgtacggagatcgcgacttactcctccgctctacctgaagctccattccctttaaccagcatctcccctttccccatgcggcctctgccctcacccagggcctggtcacctccattctactctctgcctctgagtttgac-ttttttagattccacttacgagtgagattatgtagcctttgtctttctgtgccgtacttactttgcctaacataacatcctccgggtctggccatattgttgcaaatgacgggatttcattcttttt-aaggttgcataatatttcattgtatgcatgtacta-atctgctctatccattcgtctgtgatggacagttaggttgattccgtgtcttggccattgtga--agtgtttcagtgaacacgggaacatagatatctcctcactgtgttga-tttcaattcctttggagatatttatccagaagtgagactgtggg-aatgcatggcagttctatttttca-tattttgaggagtctttatagggtttac----------------------agttacacctgcagggcgttaagagttctctttcttccacaccttcactaacagctaacttttttgataattgtctttctgacttaagtgagatgacattttattgtggtttcaatttgtatttccctaatgatgagatacgttgaatatttaaaaatgtacttgttgaccatctgtaccgtatgtcgtcttttgagaaatgtctgttcatgttctttgtccactttgtaactgggttatttgcatttttgctactgagtcgatatacc-aaattaacaaaattaaggacaaaagtcatatgattatcacaatagattcagaaaaagcacccgacaaaattccacatcctttcatgattaaaaaccctcaacaacttaggggtagaaggaa i aotNan1.NW_018494782v1 C 0 I 1493 e dasNov3.JH569188 483526 1638 + 760995 I e canFam3.chr1 56100422 0 + 122678785 C a score=5793866.000000 s hg38.chr6_KB021644v2_alt 5531 790 + 185823 tgcacctcaacacaataaagaccatattaacaaacacttggataacatgacgttcatccatgaaaagctgatggactttcctctaagatcaggaataagacaagaatccccacactcaccacatctactcaacacagcattggaagtcctagccaaaacaattaggcaagaaaaaggaattaatgaaacccaaattgag-aaaaaagatgttacattgtctctgtttgcccatggcataatcttatatgtagaaaacccta---aagactctgtcaaaaacctgctataaataataaacaaatttggtaagtttgcaagatagaaaatcaacatgtagaaatcagtctagccaca-aaagaaattaaggaaacaatcccagttacaatagcaaaaattaaaaatattttgaaataaatttaaccaagaaggtgaaagttttatgcactgaaactataaaac-actgattaa----aaaaaa--tcaaagttggaaatcaatgaaaagatagcttacattcatgtattagaaaaaatgctattttaaaaaagtccatactacccaaaggaacttatagatttaatgcaatgtttatcaaaagcccaatgatgtgttttcacaa-aaatataaaaaaggaatcttaaaattcctatggaactacaaaaaaagtcccacatagctaaagttgaatctgagcaagaagaa---caaagctggagtcatcacactgcctgatttcaacatgtgctagacagccactgccatccaaacagcatggtgctggcataaaaacagacgcattgac s panTro5.chr6 173460086 792 + 175400573 tgcacctcaacacaataaagaccatattaacaaacacttggataacatgatgttcatccatgaaaagctgatggactttcctctaagatcaggaataagacaagaatccccacactcaccacatctactcaacgcagcattggaagtcctagccaaaacaattaggcaagaaaaaggaattaatggaacccaaattgag-aaaaaagacgttacattgtctctgtttgcccatggcataatcttatatgtagaaaacccta---aagactccgtcaaaaaactgctataaataataaacaaatttagtaagtttgcaagatagaaaatcaacatgtagaaatcagtctagccaca-aaagaaattaaggaaacaatcccagttacaatagcaaaaattaaaaatattttgaaataaatttaaccaagaaggtgaaagttttatgcactgaaactataaaac-actgattaa----aaaaaaaatcaaagttggaaatcaatgaaaagatagcttacattcatgtattagaaaaaatgctattttaaaaaagtccatactacccaaaggaacctatagatttaatgcaatgtttatcaaaagcccaatgatgtgttttcacaa-aaatataaaaaaggaatcttaaaattcctatggaactacaaaaaaaatcccacatagctaaaggtgaatctgagcaagaagaa---caaagctggagtcatcacactgcctgatttcaacatgtgctagacagccactgccatccaaacagcgtggtgctggcataaaaacagacgcattgat i panTro5.chr6 C 0 C 0 s panPan2.chr6 171723932 792 + 173848474 tgcacctcaacacaataaagaccatattaacaaacacttggataacatgatgttcatccatgaaaagctgatggactttcctctaagatcaggaataagacaagaatccccacactcaccacatctactcaacgcagcattggaagtcctagccaaaacaattaggcaagaaaaaggaattaatggaacccaaattgag-aaaaaagacgttacattgtctctgtttgcccatggcataatcttatatgtagaaaacccta---aagactccgtcaaaaaactgctataaataataaacaaatttagtaagtttgcaagatagaaaatcaacatgtagaaatcagtctagccaca-aaagaaattaaggaaacaatcccagttacaatagcaaaaattaaaaatattttgaaataaatttaaccaagaaggtgaaagttttatgcactgaaactataaaac-actgattaa----aaaaaatatcaaagttggaaatcaatgaaaagatagcttacattcatgtattagaaaaaatgctattttaaaaaagtccatactacccaaaggaacctatagatttaatgcaatgtttatcaaaagcccaatgatgtgttttcacaa-aaatataaaaaaggaatcttaaaattcctatggaacgacaaaaaaaatcccacatagctaaaggtgaatctgagcaagaagaa---caaagctggagtcatcacactgcctgatttcaacatgtgctagacagccgctgccatccaaacagcgtggtgctggcataaaaacagacgcattgac i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11408475 790 - 12463322 tgcacctcaacacaataaagaccatgttaacaaacacctggataacatgacgttcat-catgaaaagctgatggactttcctctaagatcaggaataagacaagaatccccacactcaccacatctactcaacgcagcattggaagtcctagccaaaacaattaggcaaggaaaaggaattaatgaaacccaaattgag-aaaaaagatgttacattgtctctgtttgcccatggcgtaatcttatatgtagaaaacccta---aagactccgtcaaaaaactgctataaataataaacaaatttagtaagtttgcaagatagaaaatcaacatgtagaaatcagtctagccaca-aaagaaattaaggaaacaatcccagttacaatagcaaaaattaaaaatattttgaaataaatttaaccaagaaggtgaaagttttatgcactgaaactataaaac-actgattta----aaaaaa-atcaaagttggaaatcaatgaaaagatagcttacattcatgtattagaaaaaatgctattttaaaaaagtccatactacccaaaggaacctatagatttaatgcaatgcttatcaaaagcccaatgatgtgttttcacaa-aaatataaaaaaggaatcttaaaattcctatggaactacaaaaaaaatcccacatagctaaagttgaatctgagcaagaagaa---caaagctggagtcatcacactgcctgatttcaacatgtgctagacagccactgtcatccaaacaccgtggtgctggcataaaaacagacgcattgag i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156235108 789 + 157873769 tgcacctcaacacaatacagaccatattaacaaatacttggataacatgatgttcatctgtgaaaagctgatggactttcctgtaagatcaggagtaagacaagaatccccacactcaccacatctactcaacacagcattggaagacctatccaaagcaattaggcaagaaaaaggaattaatgaaacccaaattgggaaaaaaagatgttacattctctctgttcgccgatggcataatcttatatgtagaaaacccta---aagactaggtcaaaaaactgctataaataatcaacaaatttagtaagtttgcaagatagaaaatcaacatgtagaaatgaatctagccaca-aaagaaatcaagaaaacaatcccagttacaatagcaaaaattaaaaatattttgaaataaatttaaccaagaaggtgaaagttttatacactgaaactataaaac-actgattta----aaaaa---ttgaagttggaacttaatgaaaagatagcttacattcgtgcattagaaaaaatacaatttttaaaaagtccacactacctaaaggaacctatagatttaatgcaatgtttatcaaaagcccaatgatgtgttttcacaa-aaatataaaaaaggaatcttaaaattcctatggaattacaaaaaaa-ccccacatagctaaagttgaatctgagcaagaagaa---caaaactggcgtcatcacactgcctgatttcaacatgtgctagatagccactgtcatccaagcagcatggtgctggcatgaaaacagacacattgac i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170261461 723 + 172585720 tgcacctcaacacaataaagaccatgttaacaaacacttgggtaacatcatgttcatctgtgaaaagctgacagactttcctctaagatcaggaataagacaagaatccccactctcaccacatctactcaacacagtattggaagtcctagccaaaacgactaggcaagaaaaaagagttaatgaaacccaaattggg-aaaaaagatgttacattgtctctgtttgctgatggcataatcttatatgtagaaaatccta---aagactccatcaaaaagctgctataaataataaacaaatttagtaagtttgcaagatagaaaatcaacatgtagaaatcagtctagccaca-aaagaaattaagaaagcaatcccagctgcaatagcaaaaattaaaaatattttgaactgtatttaaccaagaaggtgaaagttttgtacactgaaactataaaac-actgattta----aaaaaa--ttgaagttggaaatcaatg---------------------------------------------------------------aggaatctatagatttaatgcaatgtttttcaaaagcccaattatgtgttttcacaa-aaatataaaaaaggaatcttaaaattcctatggaactacaaaaaaa-tcccacatagctaaagttgaatccgagc---aagaa---caaaactggagtcatcacactgcctgatttcaacgtgtgctaaatagccaccgtcatccaaacagcatggtactggcattaaaacagatgcattgac i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169007068 723 - 170955103 tgcacctcaacacaataaagaccatgttaacaaacacttgggtaacatcatgttcatctgtgaaaagctgacagactttcctctaagatcaggaataagacaagaatccccactctcaccacatctactcaacacagtattggaagtcctagccaaaacaattaggcaagaaaaaagaattaatgaaacccaaattggg-aaaaaagatgttacattgtctctgtttgctgatggcataatcttatatgtagaaaatccta---aagactccatcaaaaagcggctataaataataaacaaatttagtaagtttgcaagatagaaaatcaacatgtagaaatcagtctagccaca-aaagaaattaagaaaacaatcccagctgcaatagcaaaaattaaaaatattttgaactatatttaaccaagaaggtgaaagttttgtacactgaaactataaaac-actgattta----aaaaaa--ttgaagTTGGAAATCAATG---------------------------------------------------------------aggaatctatagatttaatgcaatgtttatcaaaagcccaattatgtgttttcacaa-aaatataaaaaaggaatcttaaaattcctatggaactacaaaaaaa-tcccacatagctaaagttgaatccgagc---aagaa---caaaactggagtcatcacactgcctgatttcaacgtgtgctaaatagccaccgtcatccaaacagcatggtactggcattaaaacagatgcattgac i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8294325 722 + 10161646 tgcacctcaacacaataaagaccatgttaacaaacacttgggtaacatcatgttcatctgtgaaaagctgacagactttcctctaagatcaggaataagacaagaatccccactctcaccacatctactcaacacagtattggaagtcctagccaaaacaattaggcacgaaaaaagaattaatgaaacccaaattggg-aaaaaagatgttacattgtctctgtttgctgatggcataatcttatatgtagaaaatccta---aagactccatcaaaaagctgctataaataataaacaaatttagtaagtttgcaagatagaaaatcaacatgtagaaatcagtctagccaca-aaagaaattaagaaaacaatcccagctgcaatagcaaaaattaaaaatattttgaactatatttaaccaagaaggtgaaagttttgtacactgaaactataaaac-actga-tta----aaaaaa--tcgaagttggaaatcaatg---------------------------------------------------------------aggaatctatagatttaatgcaatgtttatcaaaagcccaattatgtgttttcacaa-aaatataaaaaaggaatcttaaaattcctatggaactacaaaaaaa-tcccacatagctaaagttgaatccgagc---aagaa---caaaactggagtcatcacactgcctgatttcaacgtgtgctaaatagccaccgtcatccaaacagcatggtactggcattaaaacagatgcattgac i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1323767 726 + 3144229 tgcacctcaacacaataaagaccatgttaacaaatacttgggtaacatcatgttcatctgtgaaaagctgacagactttcctctaagatcaggaataagacaagaatccccactctcaccacatctactcaacacagtactggaagtcctagccaaaacaattaggcaagaaaaaagaattaatgaaacccaaattggg-aaaaaagatgttacattgtctctgtttgccaatggcataatcttatatgtagaaaatccta---aagactccatcaaaaagctgctataaataataaacaaatttagtaagtttgcaagatagaaaatcaacatgtagaaatcagtctagccaca-aaagaaattaagaaaacaatcccagctgcaatagcaaaaattaaaaatattttgaactatatttaaccaagaaggtgaaagttttgtacactgaaactataaaac-actgattaa----aaaaaa--ttaaagTTGGAAATCAATG---------------------------------------------------------------aggaatctatagatttaatgcaatgtttatcaaaagcccaattatgtgttttcacaa-aaatataaaaaaagaatcttaaaattcctatggaactacaaaaaaa-tcccacgtagctaaagttgaatctgagc---aagaagagcaaaactggagtcatcacactgcctgatttcaacatgtgctagatagccaccgtcatccaaacagcgtggtactggcattaaaacagacgcattgac i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96603198 723 + 98384682 tgcacctcaacacaataaagaccatgttaacaaatacttgggtagcatcatgttcatctgtgaaaaactgacagactttcctctaagatcaggaataagacaagaatccccactctcaccacatctactcaacacagtattggaagtcctagccaaaacaattaggcaagaaaaagcaattaatgaaacccagattggg-aaaaaagatgttacattgtctctgtttgctgatggcataatcttatacgtagaaaacccta---aagacaccatc---aagctgctataaataataaacaaatttagtaagtttgcaagatagaaaatcaacatgtagaaatcagtctagccaca-aaagaaattaagaaaacaatcccagctgcaatagcaaaaattaaaaatattttgaactaaatttaaccaagaaagtgaaagttttgtacactgaaactataaaac-actgattaa----aaaaaa--ttgaagTTGGAAATCAATG---------------------------------------------------------------aggaatctatagatttaatgcaatgtttatcaaaagcccaattatgtgttttcacaa-aaatataaaaaaggaatcttaaaattcctatggaactacaaaaaaa-tcccacgtagctaaagttgaatccgagcaagaagaa---caaaactggagtcatcacactgcctgatttcaacatgtgctagatagccaccgtcatccaaaaagcatggtactggcattaaaacagatgcattgac i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8145888 723 - 10857215 tgcacctcaacacaataaagaccatgttaacaaatacttgggtaacatcatgttcatctgtgaaaagctgacagactttcctctaagatcaggaataagacaagaatccccactctcaccacatctactcaacacagtattggaagtcctagccaaaacaattaggcaagaaaaaagaattaatgaaacccaaattggg-aaaaaagatgttacattgtctctgtttgccgatggcataatcttatatgtagaaaatccta---aagactccatcaaaaagctgctataaataataaacaaatttagtaagtttgcaagatagaaaatcaacatgtagaaatcagtctagccaca-aaagaaattaagaaaacaatcacagctgcaatagcaaaaattaaaaatattttgaactatatttaaccaagaaggtgaaagttttgtacactgaaactataaaac-actgattaa----aaaaaa--ttgaagttggaaatcaatg---------------------------------------------------------------aggaatctatagatttaatgcaatgtttatcaaaagcccaattatgtgttttcacaa-aaatataaaaaaggaatcttaaaattcctatggaactacaaaaaaa-tcccacgtagctaaagttgaatccaagc---aagaa---caaaactggagtcatcacactgcctgatttcaacatgtgctagatagccaccgtcatccaaacagcatggtactggcattaaaacagacgcattgac i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15541695 684 - 23502949 tgcaccccaacacaataaagaccatgttaacaaacacctgg------------------------------------------taacatcaggaataagacaagaatccccactctcaccacatctactcaacacagtactggaagtcctagccaaaacaattaggcaagaaaaaagaattaatgaaacccaaattggg-gaaaaagatgttacattgtctctgtttgctgatggcataatcttacatgtagaaaacccta---aagactccatcaaaaagctgctataaataataaacaaatttagtaagtttgcaagatagaaaatcaacatgtagaaatcagtctagccaca-aaagaaattaagaaaacaatctcagttgcaatagcaaaaattaaaaatactttgaactaaatttaaccaagaaggtgaaagttttgtatactgaaactataaaac-actaattta----aaaaaa--ttgaagttggaaatcaatg---------------------------------------------------------------aggaatctatagatttaatgcaatgtttatcaaaagcccaattatgtgttttcacaa-aaatataaaaaaggaatcttaaaattcctatggaactacaaaaaaa-tcccacgtagctaaagttgaatccgagcaagaagaa---caaaactggagtcatcacactgcctgatttcaacatgtgctagatagccaccgtcatccaaacagcatggtactggcattaaaacagatgcattgac i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169808519 760 + 171630274 -caaccttgagacaaaaaagatcatattaacaaacacatggacaacgtcaggttccactgtgaaaagctgatgggctttcctctaagagcaggaacaagacaaagatgcccactctcaccacatctactcaacacagcactggaggtcccagccaaagcaattgggcaagaaaaagaaactaaaggaatccaaattggg-aagaaggatgttgcattgcctctgcttgccaatagcatgatgttatatgtagaaaactctaaagaagactccatcaaaaaatggttataaataataaacaaatttagtaagattg-------------caacatgtagaaatcagtctagccaca-aaagaaattaagaa------------------agcaaaaacttaaaatattttgaattaaatttaaccaagaaggtacaaattttgcacactgaaactataaaaagactgattt-----taaaaa--tcgcagatggaaatcaatgaaaagatagctcacattcatgtattagaaaaattactatttttaaaaagtccatactacccaaaggactctacagatgtaataaaacctttatcaaaatctcaatgttgtcttttcacaaaaaatagaaaaaagaaatcttaaaattcctatgtaactacaaaaaaa-tcccacatagctaaag-tgaatctgagcaagaagaa---caaaactggaggtgtcacactgcctggtttcaacatgtgctggatagccgctgtcagcaaaacagcatggtcctgacatgaaaacagacacattgac i calJac3.chr4 C 0 I 431 s saiBol1.JH378287 1233816 740 - 2905041 -caacctcaacacaataaagaccgttttaacaaacacatggataacattgggttccactgtgaaaagctgacaaactttcctctcagatcaggaataagacaagaatgtctgctctcaccacatctactcaacacagcactggaggtcctagccaaagcaattaggcgagaaaaaggaattaaagaaatccaaattgga-aagaaggatgttacgttgcctctgcttgccaatggcataatcttatatgtagaaaactcta---aagactccatcaaaaaactgttataaataataaacaaatttagtaaggttg-------------cagcatgtagaaatcagtctagccacacacaaaaattaagaa------------------agcaaaaattaaaaatattttgaatgaaatttaaccaagaaggtacaagttttgcacactgaaactttgaaac-actgatttaaaaaaaaaaa--tcaaagatggaaatcaatgaaaagatagctcacattcatgtattagaaaaattaccatttttaaaaagtccatactacccaaaggactctacagatttaatacaatctttatcaaaatctcaatgttgtcttttcacaagaaatagaaaaaagaaatcttaaaattctgatggaactacaaacaaa-tcccacatggctaaag-tgaatctgagcaagaagaa---caaaactggaggcatcacactgcctgatttcagcatgtgccggatagccactgtcaat----------------------gaaacagacgcatccac i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1186159 733 - 2164891 -caacctcaacacaataaatagcatattaacaaacacatggatagcatcaggttccactgtgaaaaactgatggactttcctctaagatcaggaataagacaagaatgcccactctcaccacatctactcaacacagtactggaggttctagccaaagcaattaggcaagaaaaaggaattaaagaaatccaaattggg-aagaaggatgttatgttgcctctgcttgccaatggcataatcttatatgtagaaaacttta---aagactccatcaaaaaactgttataaataataaacaaatttagtaaggttg-------------caacatgcagaaatcagtctggccaca-aaagaaattaagaa------------------agcaaaaatttaaaatattttgaatgaaatttaaccaataaggtacaagttttgcacactgaaactataaaac-actgata------aaaaaa--tcgcagatggaaatcaatgaaaggatagctcacattcatgtattagaaaaattactatttttaaaaagtccatactacccaaaggactctacagatttaatacaatctttatcaaaatcccaatgttgtcttttcacaaaaaatagaaaaaagaaatgttaaaattcctatggaactacaaaaaag-tcccacctatctaacg-tgaatctgagcaagaagaa---caaaactggaggcattacaatgcctgatttcaatatatgctggatagccactgtcaac----------------------aaaacagacgcattgac i cebCap1.NW_016107695v1 C 0 C 0 e aotNan1.NW_018494782v1 1422317 1493 - 1813869 I e dasNov3.JH569188 483526 1638 + 760995 I e canFam3.chr1 56100422 0 + 122678785 C a score=398881.000000 s hg38.chr6_KB021644v2_alt 6321 50 + 185823 cactggagcagtgtagggagcccagaaataaatccacatttttatggtca s panTro5.chr6 173460878 50 + 175400573 cactggagcagtgtagggagcccagaaataaatccacatttttatggtca i panTro5.chr6 C 0 C 0 s panPan2.chr6 171724724 50 + 173848474 cactggagcagtgtagggagcccagaaataaatccacagttttatggtca i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11409265 50 - 12463322 cactggagcagtgtagggagcccagaaaaaaatccacatttttatggtca i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156235897 50 + 157873769 cactggagcagtgtagggagcccagaaataaatccacatttttatggtca i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170262184 50 + 172585720 caatggagcgatgtagggagcccagaaataaatccacatttttatggtca i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169007791 50 - 170955103 caatggagcgatgtagggagcccagaaataaatccacatttttatggtca i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8295047 50 + 10161646 caatggagcgatgtagggagcccagaaataaatccacatttttatggtca i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1324493 50 + 3144229 caatggagcggtgtagggagcccagaaataaatccacatttttatggtca i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96603921 50 + 98384682 caatggagcggtgtagggagcccagaaataaatccacatttttatggtca i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8146611 50 - 10857215 caatggagcggtgtagggagcccagaaataaattcacatttttatggtca i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15542379 50 - 23502949 caatgcagtggtgtagggagcccagaaataaatccacatttttatggtca i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169809710 49 + 171630274 cagtgcagcagggtggggagtccagaaatcagtccacg-ttttacagtcc i calJac3.chr4 I 431 C 0 s saiBol1.JH378287 1234556 49 - 2905041 caatgcagcagtgtagggagtccagacatcagtccaca-ttttatgttca i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1186892 49 - 2164891 caatgtagcagtggagggagtccagaaatcagtccaca-ttttatggtca i cebCap1.NW_016107695v1 C 0 C 0 e aotNan1.NW_018494782v1 1422317 1493 - 1813869 I e dasNov3.JH569188 483526 1638 + 760995 I e canFam3.chr1 56100422 0 + 122678785 C a score=522281.000000 s hg38.chr6_KB021644v2_alt 6371 58 + 185823 gttgatctttgagaaattgctaagaatacacaatggagaaatgatagtttcctcaat-----a s panTro5.chr6 173460928 58 + 175400573 gttgatctttgagaaattgctaagaatacacaatggagaaatgatagtttcctcaat-----a i panTro5.chr6 C 0 C 0 s panPan2.chr6 171724774 56 + 173848474 gttgatctttgagaaattgctaagaatacacaatggagaaatg--agtttcctcaat-----a i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11409315 58 - 12463322 gttgatctttgagaaattgctaagaatacacaatggagaaatgatagtttcctcaat-----a i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156235947 58 + 157873769 gttgatctttgagaaattgctaagaatacacaatggagaaatgatagtttcctcaat-----a i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170262234 62 + 172585720 gtagatctttgagaaattgctaagactacacaatggagaaatgatagtttcctcaat-aaata i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169007841 62 - 170955103 gtagatctttgagaaattgctaagactacacaatggagaaatgatagtttcctcaat-aaata i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8295097 62 + 10161646 gtagatctttgagaaattgctaagactacacaatggagcaatgatagtttcctcaat-aaaga i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1324543 62 + 3144229 gtagatctttgagaaattgctaagactacacaatggagaaatgatagtttcctcaat-aaata i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96603971 62 + 98384682 gttgatctttgagaagttgctaagactacacaatggagaaatgatagtttcctcaat-aaata i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8146661 62 - 10857215 gtagatctctgagaaattgctaagactacacaatggagaaatgatagtttcctcaat-aaata i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15542429 63 - 23502949 gttgatctttgagaaattgctaagactacacaatggagaaatgatagtttcctcaataaaata i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169809759 58 + 171630274 gttggtctttgccaaattgctaagaacacacagtggagaaataatcgtaccctcaat-----a i calJac3.chr4 C 0 I 4 s saiBol1.JH378287 1234605 58 - 2905041 gttgatctttgtcaaattgctaagaaaacacaatggagaaatgatagttccctcaat-----a i saiBol1.JH378287 C 0 I 4 s cebCap1.NW_016107695v1 1186941 58 - 2164891 gttgatctttgtcatattgctaagaaaacacaatggagacatgatagttccctcaat-----a i cebCap1.NW_016107695v1 C 0 I 4 s aotNan1.NW_018494782v1 1423810 58 - 1813869 gttgatctttgtcaaattgctaagaagacgcaatgcagaaatgatagttccctcaat-----a i aotNan1.NW_018494782v1 I 1493 I 19 e dasNov3.JH569188 483526 1638 + 760995 I e canFam3.chr1 56100422 0 + 122678785 C a score=96439.000000 s hg38.chr6_KB021644v2_alt 6429 12 + 185823 gtgttgggcaac s panTro5.chr6 173460986 12 + 175400573 atgttgggcaac i panTro5.chr6 C 0 C 0 s panPan2.chr6 171724830 12 + 173848474 gttttgggcaac i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11409373 12 - 12463322 gtgttgggcaac i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156236005 12 + 157873769 gtgttgggcaac i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170262296 12 + 172585720 gtgttgggcaac i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169007903 12 - 170955103 gtgttgggcagc i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8295159 12 + 10161646 gtgttgggcaac i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1324605 12 + 3144229 gtgttgggcaac i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96604033 12 + 98384682 atgttgggcaac i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8146723 12 - 10857215 gtgttgggcaac i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15542492 12 - 23502949 gtgttgggcaac i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169809821 12 + 171630274 gtgctgggcacc i calJac3.chr4 I 4 C 0 s saiBol1.JH378287 1234667 12 - 2905041 gtgctgggcagc i saiBol1.JH378287 I 4 C 0 s cebCap1.NW_016107695v1 1187003 12 - 2164891 gtgctgggcccg i cebCap1.NW_016107695v1 I 4 C 0 e aotNan1.NW_018494782v1 1423868 19 - 1813869 I e dasNov3.JH569188 483526 1638 + 760995 I e canFam3.chr1 56100422 0 + 122678785 C a score=2700924.000000 s hg38.chr6_KB021644v2_alt 6441 290 + 185823 tggatgtccatggcaggagagtaggagtggatgcca-atctcacactagatacaaaattagcttgaagtgtatcagtgacttaaacgtaagacctgccaatgtaaaactcctagaaaaaaacaagggaaaaagcttcat-gacattgctc-tgggca--gagtctttgaatatgac-cccaaaagacaggcaacaaaag-caaaaatagacaaatggaattgcatccaaattaaaagcttcttcacagcaaagggaacaagtaaagaatgaagagacagcctatagagtgggagata s panTro5.chr6 173460998 290 + 175400573 tggatgtccatggcaggagagtaggagtggatgcca-atctcacagtagatacaaaattagcttgaagtgtatcagtgacttaaacgtaagacctgccaatgtaaaactcctagaaaaaaacaagggaaaaagcttcat-gacattgctc-tgggca--gagtctttgaatatgac-cccaaaagacaggcaacaaaag-caaaaatagacaaatggaattgcatccaaattaaaagcttcttcacaacaaagggaacaagtaaagaatgaagagacagcctatagagtgggagata i panTro5.chr6 C 0 C 0 s panPan2.chr6 171724842 290 + 173848474 tggatgtccatggcaggagagtaggagtggatgcca-atctcacactagatacaaaattagcttgaagtgtatcagtgacttaaacgtaagacctgccaatgtaaaactcctagaaaaaaacaagggaaaaagcttcat-gacattgctc-tgggca--gagtctttgaatatgag-cccaaaagacaggcaacaaaag-caaaaatagacaaatggaatcgcatccaaattaaaagcttcttcacaacaaagggaacaagtaaagaatgaagagacagcctatagagtgggagata i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11409385 290 - 12463322 tggatgtccatggcaggagagtaggagtggatacca-atctcacactagatacaaaattagcttgaagtgtatcagtgacttaaacgtaagacctgccaatgtaaaactcctagaaaaaaacaagggaaaaagcttcat-gacattgctc-tgggca--gagtctttgaatatgac-tccaaaagacaggcaacaaaag-caaaaatagacaaatggaattgcatccaaattaaaagcttcttcacaacaaagggaacaagtaaagaatgaagagacagcctacagagtgggagata i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156236017 288 + 157873769 tggatgtccatggcaggagagtaggagtggatgcca-atctcacactagatacaaaattagcttaaagtgtatcagtgacttaaacgtaagacctgccaatgtaaaactcctggaaaaaaacaagggaaaaagcttcat-gccattgctc-tgggc----agtctttcaatatgac-cccaaaagacaggcatcaaaag-caaaaatagacaaatggaattgcatccaaattaaaagcttcttcacaacaaagggaacaagcaaagaatgaagagacagcctatagagtgggagata i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170262308 290 + 172585720 tggatgtccatggcaggagagtaggagtggacgcca-atctcacactagacacaaaattagcttaaagtgtatcagtgacttaaatgcaagacctgccaatgtaaaactcctag-aaaaaacaagggaaaaagcttcat-gacattagtc-tgggca--gagtctttgaatatgac-cccaaaagataggcaacaaaagaaaaaagaagacaaatggaattgcatccaaattaaaagcttcttcacaacaaagggaacaagtaaagactgaaaagacagcctatggagtgggagata i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169007915 290 - 170955103 tggatgtccatggcaggagagtaggagtggacgcca-atctcacactagacacaaaattagcttaaagtgtatcagtgacttaaatgcaagacctgccaatgtaaaactcctag-aaaaaacaagggaaaaagcttcat-gacattagtc-tgggca--gagtctttgaatatgac-cccaaaagataggcaacaaaagaaaaaagaagacaaatggaattgcatccaaattaaaagcttcttcacaacaaagggaacaagtaaagactgaaaagacagcctatggagtgggagata i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8295171 290 + 10161646 tggatgtccatggcaggagagtaggagtggacgcca-atctcacactagacacaaaattagcttaaagtgtatcagtgacttaaatgcaagacctgccaatgtaaaactcctag-aaaaaacaagggaaaaagcttcat-gacattagtc-tgggca--gagtctttgaatatgac-cccaaaagataggcaacaaaagaaaaaaaaagacaaatggaattgcatccaaattaaaagcttcttcacaacaaagggaacaagtaaagactgaaaagacagcctatggagtgggagata i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1324617 290 + 3144229 tggatgtccatggcaggagagtaggagtagatgcca-atctcacactagacacaaaattagcttaaaatgtatcagtgacttaaatgcaagacctgccaatgtaaaactcctag-aaaaaacaagggaaaaagcttcat-gacattggtc-tgggca--gagtctttgaatatgac-cccaaaagataggcaacaaaagaaaaaaaaagacaaatggaattgcatccaaattaaaagcttcttcacaacaaagggagcaagtaaagactgaaaagacagcctatggagtgggagata i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96604045 288 + 98384682 tggatgtcaatggcaggagagtaggagtggacgcca-atctcacactagatacaaaattagcttaaagtgtatcagtgacttaaatgcaagacctgccaatgtaaaactcctag-aaaaaacaagggaaaaagcttcat-ggcattggtg-tgggca--gagtctttgaatatgac-cccaaaagataggcaacaaaag--aaaaaaagacaaatgcaattgcgtccaaattaaaagcttcttcacaacaaagggaacaagtaaagactgaaaagacagcctatggagtgggagata i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8146735 290 - 10857215 tggatgtccatggcaggagagtaggagtagatgcca-atctcacactagacacaaaattagcttaaaatgtatcagtgacttaaatgcaagacctgccaatgtaaaactcctag-aaaaaacaagggaaaaagcttcat-gacattggtc-tgggca--gagccttggaatatgac-cccaaaagataggcaacaaaagaaaaaaaaagaccaatggaattgcatccaaattaaaagcttcttcacaacaaagggagcaagtaaagactgaaaagacagcctatggagtgggagata i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15542504 289 - 23502949 tggatgtccatggcaggagagtaggagtggatgcca-atctcacactagatacaaaattaactgaaagtgtatcagtagcttaaatgtaagacctgccaatgtaaaactcctag-aaaaaacaagggaaaaagcttcat-gacatcgttc-tgggca--gagtctttgaatatgac-cccaaaagataggcaacaaaag-aaaaaaaagacaaatggaattgcatccaaattaaaagcttcttgacaacaaagggaacaagtaaagaatgaaaagacagcctatggagtgggagata i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169809833 287 + 171630274 tgaatgtccacgacaggagagtaagagtggacgtcg-attttacgctagatacaaaattagcttaaagtgtatccgtgacttaaatataagacctgcaaatataaaactccgag-aagaaacaa-gggagaagtttcat-gacactggtc-tgggcaaggagtttttgaacatgat-cccaaaacacaggcaacaa----caaaaatagagaaatggaattgcatcggaatgaaaagcttctccacaacaaagggaagaagtaaggagtggagagacggccgctggggcgggcgatg i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1234679 292 - 2905041 tgaatgtccatggcaggagagtaagtgtggacgtca-attttatgctagatacaaaattagcttgaagtgtatcagtgacttaaatgtaaggcctgcaaatgtaaaactcctag-aaaaaagaaggggagaagttttat-gacactggtc-tgggcaaggagtttttgaatatgatccccaagacacagacaacaaaag-caaaaatagacaaatggaattgcatccaaattaaaagcttctccacaacaaagggaacaagtaaggaatgaagagacagcctatggggtgggcaata i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1187015 292 - 2164891 tgaatgtccatggcaggagagtaagcatggatgtca-attttacgctagatgcaaaattagcttaaaatatatcagtgacttcaatgtaaggcctgcaaatataaaactcctag-gaaaaacaaggggagaagtttcac-gacactggtc-tgggaaaggagtttttgaatatgatccacaaaacacaggcaacaaaag-caaaaatagacaaatggaattgcatccaaattaaaagcttctccacaacaaagggaacaagtaaggaatgaagagacagcctatggggtgggcgata i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1423887 295 - 1813869 tgaatgtccatggcaggagagtaagagtggacgtcgcattttacgctagatacaaaattagcttaaagcgtatcagtgacttaactgtaagacctgaaattgtaaaactcctag-aaaaaacaaggggagaagtttcatggacactggtcttgggcaaggattttttgaatatgatcccccaaacacaggcaacgaaag-caaaaatagacaagtggatttgcatccaaattaaaagcttctccacaacaaagggaacaagtaaggaatgcagagacagcctatggggtgggcgata i aotNan1.NW_018494782v1 I 19 I 82 e dasNov3.JH569188 483526 1638 + 760995 I e canFam3.chr1 56100422 0 + 122678785 C a score=631229.000000 s hg38.chr6_KB021644v2_alt 6731 78 + 185823 -tttgaagccatacatctgatagggggttcatatccaaaatagacaaggaattcgatctactcaatagcaagaacacca s panTro5.chr6 173461288 78 + 175400573 -tttgaagccatacatctgatagggggttcatatccaacatagacaaggaatttgatctactcaatagcaagaacacca i panTro5.chr6 C 0 C 0 s panPan2.chr6 171725132 78 + 173848474 -tttgaagccatacatctgatagggggttcatatccaaaatagacaaggaatttgatctactcaatagcaagaacacca i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11409675 78 - 12463322 -tttgaagccatacatctgatagggggtccatatccaaaatagacaaggaattcgatctactcaatagcaagaacacca i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156236305 78 + 157873769 -tttgaagccatacatctgatagggggttcatatccaaaatagacaaggaattcaatctactcaatagcaagaacacca i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170262598 78 + 172585720 -tttgaagccatacagctgatagggggttcatatccaaaatagacaaggaattctatctacttaatagcaagaacacca i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169008205 78 - 170955103 -tttgaagccatacagctgatagggggttcatatccaaaatagacaaggaattctatctacttaatagcaagaacacca i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8295461 78 + 10161646 -tttgaagccatacagctgatagggggttcatatccaaaatagacaaggaattctatctacttaatagcaagaacacca i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1324907 78 + 3144229 -tttgaagccatacatctgatagggggttcatatccaaaatagacaaggaattcaatctacttaatagcaagaacacca i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96604333 78 + 98384682 -tttgaagccatacgtctgatagggggttcatatccaaaatagacaaggaattcaatctactcaatagcaagaacacca i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8147025 78 - 10857215 -tttgaagccatacatctgatagggggttcatatccaaaatagacaaggaattcaatctacttaatagcaagaacacca i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15542793 78 - 23502949 -tttgaagccatacatctaatagggagttcatatccaaaatagacaaggagttcaatctactcaatagcaagaacacca i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169810120 78 + 171630274 tgtgcaggccacacatccgatagggacgtcctctccaaagtgcacaaggaatcc-atctgccgaatagcaagaacacaa i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1234971 79 - 2905041 tttgcaagccacacatctgatagggacttcctctccaaactggacaaggaattcaatctgctgaatagcaagaacacaa i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1187307 79 - 2164891 cttgcaagccacacatccgacagggacttcctctccaaagtggacaaggaattcaatctgctgaatagcaagaacacaa i cebCap1.NW_016107695v1 C 0 C 0 e aotNan1.NW_018494782v1 1424182 82 - 1813869 I e dasNov3.JH569188 483526 1638 + 760995 I e canFam3.chr1 56100422 0 + 122678785 C a score=736682.000000 s hg38.chr6_KB021644v2_alt 6809 80 + 185823 cccaattaataagtgtgcgaataatctgaataatcattGATTTTAAGTGTTTTCAATGCCTAGCATTTACTAATAA-TCTG s panTro5.chr6 173461366 80 + 175400573 cccaattaataagtgtgcgaataatctgaataatcattGATTTTAAGTGTTTTCAATGCCTAGCATTTACTAATAA-TCTG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171725210 80 + 173848474 cccaattaataagtgtgcgaataatctgaataatcattGATTTTAAGTGTTTTCAATGCCTAGCATTTACTAATAA-TCTG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11409753 80 - 12463322 cccaattaataagtgtgcaaataatctgaataatcattGATTTTAAGTGTTTTCAATGCCTAGCATTTACTAATAA-TCTG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156236383 80 + 157873769 cccaattaataagtgtgcaaataatctgaataatcattGATTTTAGGTGTTTTCAATGCCTAGCATTTACTAATAA-TCTG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170262676 80 + 172585720 cccaattaataagtgagcaaataatctgaatTATCATTGATTTTATGTGTTTTCAATGCCTAGCATTTACTAATAA-TCTG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169008283 80 - 170955103 cccaattaataagtgagcaaataatctgaatTATCATTGATTTTATGTGTTTTCAATGCCTAGCATTTACTAATAA-TCTG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8295539 80 + 10161646 cccaattaataagtgagcaaataatctgaatTATCATTGATTTTATGTGTTTTCAATGCCTAGCATTTACTAATAA-TCTG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1324985 80 + 3144229 cccaattaataagtgagcaaataatctgaatTATCATTGATTTTATGTGTTTTCAATGCCTAGCATTTACTAATAA-TCTG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96604411 80 + 98384682 cccaattaataagtgagcaaataatctgaatTATCATTGATTTTATGTGTTTTCAATGCCTAGCATTTACTAATAA-TCTG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8147103 80 - 10857215 cccaattaataagtgagcaaataatctgaatTATCATTGATTTTATGTGTTTTCAATGCCTAGCATTTACTAATAA-TCTG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15542871 80 - 23502949 cccaattaataagtgagcaaataatctgaatTATCATTGATTTTATGTATTTTCAGTGCCTAGCATTTACTAATAA-TCTG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169810198 81 + 171630274 cccaatcaataagtcagcaaaaactctgaataatcattgatttcaaGCCTTTTCAGGGCCTAGTATTTACTAATAACCCTG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1235050 81 - 2905041 cccaattaataaatgagcaaagactctgaaaaatcattGATTTCAAGTGCTTTCAATGCCTAGCATTTACTAATAACCCTG i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1187386 80 - 2164891 cccaattaataagtgagcaaagactctgaataatcattGATTTCAAGTGTTTTCAATGCCTAGCATTTACTAA-AACCCTG i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1424264 78 - 1813869 cccaattaataagtgaacaaagactctgaataatcattgatttcaaGTG-TTTCGATGCCT-GCGTTTA-TAATAACCCTG i aotNan1.NW_018494782v1 I 82 C 0 e dasNov3.JH569188 483526 1638 + 760995 I e canFam3.chr1 56100422 0 + 122678785 C a score=1476454.000000 s hg38.chr6_KB021644v2_alt 6889 169 + 185823 TGACACAGGAATAGAGCCACA-CCCTCAAATTTACGCTTTTA-TGAATTACCTAAAGGAAGTTTCGATCAACTGTCAACTGAAGGATCGGACTA----TGATTACAGATTTCTCAGTATTCTTCCTGCCTCTCACCTCCCCCCCGCCCCAAGTCCCCTG-CACACCATGCACACCC s panTro5.chr6 173461446 169 + 175400573 TGACGCAGGAATAGAGCCACA-CCCTCAAATTTACGCTTTTA-TGAATTACCTAAAGGAAGTTTCGATCAACTGTCAACTGAAGGATTGGACTA----TGATTACAGATTTCTCAGTATTCTTCCTGCCTCTCACCTCCCCTCCGCCCCAAGTCCCCTG-CACACCATGCACACCC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171725290 169 + 173848474 TGACGCAGGAATAGAGCCACA-CCCTCAAATTCACGCTTTTA-TGAATTACCTAAAGGAAGTTTCGATCAACTGTCAACTGAAGGATTGGACTA----TGATTACAGATTTCTCAGTATTCTTCCTGCCTCTCACCTCCCCTCCGCCCCAACTCCCCTG-CACACCATGCACACCC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11409833 173 - 12463322 TGACGCAGGAATAGAGCCACA-CCCTCAAATTTATGCTTTTA-TGAATTACCTAAAGGAAGTTTCGATCAACTGTCAACTGAAGGATCGGACTATGATTGATTACAGATTTCTCAGTATTCTTCCTGCCTCTCACCTCCCCCCCACCCCAAGTCCCCTG-CACACCATGCACACCC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156236463 169 + 157873769 TGATGCAGGAGTAGAGCCACA-CCCTCAAATTTATGCTTTTA-TGAATTACCTGAAGGAAGTTTCGGTCAACTGTCAACTCAAGGATCGGACTC----TGATTACAGATTTCTCAGTATTCTTCCTGCCTCTCACCTCCCCCCTCCCCAAGCCCCCCTG-CACACCATGCACACCC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170262756 169 + 172585720 TGATGCAGGAATACAGCCACA-CCCTCAAATTTACGCTTTTA-TGAATTACCTGAGGGAAGTTTTGGTCAACTGTCAACTCAAGGATCGGACTA----TGATTACAGATTACTCATTATTCTTCCTGCCTTTCACCTCCCACCGCCCCAGTTCCCCCTG-AATACCATGCACACCC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169008363 169 - 170955103 TGATGCAGGAATAGAGCCACA-CCCTCAAATTTACGCTTTTA-TGAATTACCTGAGGGAAGTTTTGGTCAACTGTCAACTCAAGGATCGGACTA----TGATTACAGATTACTCAGTATTCTTCCTGCCTTTCACCTCCCACCGCCCCAGTTCCCCCTG-AATACCATGCACACCC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8295619 169 + 10161646 TGATGCAGGAATAGAGCCACA-CCCTCAAATTTACGCTTTTA-TGAATTACCTGAGGGAAGTTTTGGTCAACTGTCAACTCAAGGATCGGACTA----TGATTACAGATTACTCAGTATTCTTCCTGCCTTTCACCTCCCACCGCCCCAGTTCCCCCTG-AATACCATGCACACCC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1325065 169 + 3144229 TGATGCAGGAATAGAGCCGCA-CCCTCAAATTTACGCTTTTA-TGAATTACCTGAAGGAAGTTTTGGTCAACTGTCAACTCAAGGATCGGACTA----TGATTACAGATTACTCAGTATTCTTCCTGCCTCTCACCTCCCACCGCCCCAGTTCCCCCTG-AATACCATGTGCACCC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96604491 169 + 98384682 TGATGCAGGAATAGAGCCACA-CCCTCAAATTTACGCTTTTA-TGAATTACCTAAAGGAAGTTTTGGTCAACTGTCAACTCAAGGATCGGACTA----TGATTACAGATTACTCAGTATTCTTCCTGCCTCTCACCTCCCACCGCCCCAGTTCCCCCTG-AATACCATGCGCACCC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8147183 169 - 10857215 TGATGCAGGAATAGAGCCGCA-TCCTCAAATTTACGCTTTTA-TGAATTACCTGAAGGAAGTTTTGGTCAACTGTCAACTCAAGGATCGGACTA----TGATTACAGATTACCCAGTATTCTTCCTGCCTCTCACCTCCCACCGCCCCAGTTCCCCCTG-AATACCATGCACACCC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15542951 169 - 23502949 TGATGCAGGAATAGAGCCACA-CCCTCAAATTTACGCTTTTA-TGAATTACCTGAAGGAAGTTTTGGTCAACTGTCAACTCAAGGATCGGACTA----TGATTACAGATTACTCAGTATTCTTCCTGCCTCTCACCTCCCACCGCCCCAACTCTCCCTG-AATACCATGCACATCC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169810279 150 + 171630274 TGATGCGTGACTACAGCTACA-CCTCTGAACTGACACTTTTA-TGAATTGCCTAAAGCAAG--TCACTCACCTGTGCAGTCAAGGATTGCACTG----CGATCACAGAGTTCTCCGTGTTCTTCCTGCCTCTCACCTCC-----------------CTG-CACCCCATGCACACCC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1235131 169 - 2905041 TGGTGCAGAAATGGAGCTATA-CCCCTGAACTGACACTTTTA-TGAGTTGCTTAAAGCAAGTTTCACTCACCTGTCCAGTCAAGGATTGGACTA----TGACCACAGATTTCTCAGTGTTCTTCCTGCCTCTCACCTCCCCGCGCCCCACGCCCTTCTG-CACCCCATGCACACCC i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1187466 169 - 2164891 TGATGCAGGAATAGAGCTATA-CTCCTGAACTGACACTTTTA-TGAATTGCTTAAAGCAAGTTTTACTCAGCCGTCCAGTCAAGGATTGGACTA----TGATCACAGATTTCTCAGTGTTATTCCTGCCTCTCACCTCCCTGCACCCCAAACCCTCCTG-CACCCCATGCATAGCC i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1424342 170 - 1813869 TGATGCAGGA-CAGAGCTACACCCCCCGAACTGACACTTTTATTGAATTGCTTAAAGCAAGTTTCA-TCACCTGTCCAGTCGAGGATGGGACTA----CGATCACAGATTTCTCAGTGTTCCTCCTGCCTCTCACCTCCCCGCGCCCCACGCCCTCCTGCCACCCCATGCACACCC i aotNan1.NW_018494782v1 C 0 I 17 s canFam3.chr1 56100422 166 + 122678785 TGATGTAGATATAGATCCATA-CGCTT-ACTTTTTGATATTA-TAAGTCACTTACAGCAAATTGCAACCAAATGGCAAGTCAAGGATTTGACTG----TTCTAACAGATTCCCAGTAATTCCGTCTGTCTGCCACCAATCCTCCTTCCACGCCCTCCTA---CTTCACACTCACCC i canFam3.chr1 C 0 C 0 e dasNov3.JH569188 483526 1638 + 760995 I a score=185526.000000 s hg38.chr6_KB021644v2_alt 7058 30 + 185823 ACGGGTCTTCTCAAAACTGTGGATTTTGTC s panTro5.chr6 173461615 30 + 175400573 ACGGATCTTCTCAAAACTGTGGATTTTGTC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171725459 30 + 173848474 ACGGATCTTCTCAAAACTGTGGATTTTGTC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11410006 30 - 12463322 ACGGGTCTTCTCGAAACTGTGGATTTTGTC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156236632 30 + 157873769 ACGTGTCTTCTCAAAACTGTGGATTTTGTC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170262925 30 + 172585720 ACGTGTCTTCTCAAAACTGTGGATTTTGTC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169008532 30 - 170955103 ACGTGTCTTCTCAAAACTGTGGATTTTGTC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8295788 30 + 10161646 ACATGTCTTCTCAAAACTGTGGATTTTGTC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1325234 30 + 3144229 ACGTGTCTTCTCAAAACTGTGGATTTTGTC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96604660 28 + 98384682 ACGTGTCTTCTCAAAAC--TGAATTTTGTC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8147352 30 - 10857215 ACGTGTCTTCTCAAAACTGTGGATTTTGTC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15543120 30 - 23502949 ACGTGTCTTCTCAAAACTGTGGATTTTGTC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169810429 15 + 171630274 ACGTGTCTTC--AAGTC------------- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1235300 17 - 2905041 ACGTGTCTTCTTAAGTC------------- i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1187635 17 - 2164891 ACGTGTCTTCTTAAGTC------------- i cebCap1.NW_016107695v1 C 0 C 0 s canFam3.chr1 56100588 29 + 122678785 ACACGTTTTCCTAAAGA-GTGGATTTTATC i canFam3.chr1 C 0 C 0 e aotNan1.NW_018494782v1 1424512 17 - 1813869 I e dasNov3.JH569188 483526 1638 + 760995 I a score=500195.000000 s hg38.chr6_KB021644v2_alt 7088 51 + 185823 TTGCCAGCCCTACTGCGATATTTCACTGGCTTCGTGTTGCTTTTGTGAGAC- s panTro5.chr6 173461645 51 + 175400573 TTGCCAGCCCTACTGCGATATTTCACTGGCTTCGTGTTGCTTTTGTGAGAC- i panTro5.chr6 C 0 C 0 s panPan2.chr6 171725489 51 + 173848474 TTGCCAGCCCTACTGCGATATTTCACTGGCTTCGTGTTGCTTTTGTGAGAC- i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11410036 50 - 12463322 TTGCCAGCCCTACTGAGATATTTCACTGGCTTC-TGTTGCTTTTGTGAGAC- i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156236662 51 + 157873769 TTGCCATCCCTACTGAGATATTTCACTTGCTTCGTGTTGTTTTTGTGAGAT- i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170262955 51 + 172585720 TTGCCAGCCCTACTGAGGTATTTCACTGGCTTTGTGTTGTTTTTGTGAGAC- i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169008562 51 - 170955103 TTGCCAGCCCTACTGAGGTATTTCACTGGCTTTGTGTTGTTTTTGTGAGAC- i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8295818 51 + 10161646 TTGCCAGCCCTACTGAGGTATTTCACTGGCTTTGTGTTGTTTTTGTGAGAC- i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1325264 51 + 3144229 TTGCCAGCCCTACTGAGGTATTTCACTGGCTTTGTGTTGTTTTTGTGAGAC- i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96604688 51 + 98384682 TTGCCAGCCCTACTGAGGTATTTCACTGGTTTTGTGTTGTTTTTGTGAGAC- i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8147382 51 - 10857215 TTGCCAGCCCTACTGAGGTATTTCACTGGCTTTGTGTTGTTTTTGTGAGAC- i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15543150 51 - 23502949 TTGCCAGCCCTACTGAGGTATTTCACTGGCTTTGTGTTGTTTTTGTGAGAC- i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169810444 51 + 171630274 TTGCCAGCCCTACTGAGATGTTTCACCAGCTTCGTGTTGTTTTTGTGAGAC- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1235317 51 - 2905041 TTGCCAGCCCTACTGAGATGTTTCACTGGCTTCCTGTTGTTTTTGTGAGAC- i saiBol1.JH378287 C 0 I 346 s cebCap1.NW_016107695v1 1187652 51 - 2164891 TTGCCAGCCCTACTGAGATGTTTCACCGGCTTTGTGTTGTTTTTCTGAGAG- i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1424529 50 - 1813869 TTGCCAGCCCTACTGAGATGTTTCACTGGCTTCGTGTGGTTTTTG-GAGAC- i aotNan1.NW_018494782v1 I 17 C 0 s canFam3.chr1 56100617 36 + 122678785 ACGCCAGCCCAAGTCATGCATTTCGGTGG----------------TGAGAAT i canFam3.chr1 C 0 C 0 e dasNov3.JH569188 483526 1638 + 760995 I a score=96083.000000 s hg38.chr6_KB021644v2_alt 7139 13 + 185823 GTAAACCTTCACA s panTro5.chr6 173461696 13 + 175400573 GTAAACCTTCACA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171725540 13 + 173848474 GTAAACCTTCACA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11410086 13 - 12463322 GTAAACCTTCACA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156236713 13 + 157873769 GTAAACCTTCACA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170263006 13 + 172585720 ATAAACCTTCACA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169008613 13 - 170955103 ATAAACCTTCACA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8295869 13 + 10161646 ATAAACCTTCACA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1325315 13 + 3144229 ATAAACCTTCACA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96604739 13 + 98384682 GTAAACCTTCACA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8147433 13 - 10857215 ATAAACCTTCACA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15543201 13 - 23502949 GTAAACCTTCACA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169810495 13 + 171630274 ATGGACCTTCACG i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1187703 13 - 2164891 GTGGGCCTTCATG i cebCap1.NW_016107695v1 C 0 I 6 s aotNan1.NW_018494782v1 1424579 13 - 1813869 GTGGACCTTCACG i aotNan1.NW_018494782v1 C 0 C 0 s canFam3.chr1 56100653 9 + 122678785 GCAGACAGG---- i canFam3.chr1 C 0 C 0 e saiBol1.JH378287 1235368 346 - 2905041 I e dasNov3.JH569188 483526 1638 + 760995 I a score=2816447.000000 s hg38.chr6_KB021644v2_alt 7152 309 + 185823 GTGGGTGTGGGTGTG-------GCACACTCGCGCTGACTTTGCTTCGCATGCGCCCTGACCTGGCCTGGTGCAGTGCTGTCTCCTGTCTCCACTCCCCATCCTCCAAGGAAGCCCAGGCTTCACGGGAAGAGTGCCCTAAATACCACTTTCCCTTCTCTGGGACCCCAACCCTGCCGTCTTCAT---CTCCCTCTG-TACCT-ATGGA-AAATGACT--GCAATTTCAACAGTTCTTTCTAGAGGCTGGGTTTGGGCACCTCGATTAGACTATGAACTTGTAGGTGTCAGGAGTCACACATCTTTCTTTTCTGTCACCTTC---CCG s panTro5.chr6 173461709 310 + 175400573 GTGGGTGTGCGTGTG-------GCGCACTCGCGCTGACTTTGCTTCGCGTGCGCCCTGACCTGGCCTGGTGCAGCGC-GTCTCCTGTCTCCACTCCCCATCCTCCAAGGAAGCCCAGGCTTCATGGGAAGAGTGCCCTAAATACCACTTTCCCTTCTCTGGGACCCCAACCCTGCCGTCTTCAT---CTCCCTCTG-TACCT-ATGGA-AAATGACTCTGCAATTTCAACAGTTCTTTCTAGAGGCTGGGTTTGGGCACCTCGATTAGACTATGAACTTGTAGGTGTCAGGAGTCACACATCTTTCTTTTCTGTCACCTTC---CCG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171725553 311 + 173848474 GTGGGTGTGCGTGTG-------GCGCACTCGCGCTGACTTTGCTTCGCATGCGCCCTGACCTGGCCTGGTGCAGCGCTGTCTCCTGTCTCCACTCCCCATCCTCCAAGGAAGCCCAGGCTTCATGGGAAGAGTGCCCTAAATACCACTTTCCCTTCTCTGGGACCCCAACCCTGCCGTCTTCAT---CTCCCTCTG-TACCT-ATGGA-AAATGACTGTGCAATTTCAACAGTTCTTTCTAGAGGCTGGGTTTGGGCACCTCGATTAGACTATGAACTTGTAGGTGTCAGGAGTCACACATCTTTCTTTTCTGTCACCTTC---CCG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11410099 311 - 12463322 GTGGGTGTGGGTGTG-------GCACACTCGCACTGACTTTGCTTCGCATGCACCCTGACCTGGCCTGGTGCAGCGCTGTCTCCTGTCTCCACTCCCCATCCTCCAAGGAAGCCCAGGCTTCATGGGAAGAGTGCCCTAAATACAACTTTCCCTTCTCTGGGACCCCAACCCTGCCGTCTTCAT---CTCCCTCTG-TACCT-ATGGA-AAATGACTCTGCAATTTCAACAGTTCTTTCTAGAGGCTGGGTTTGGGCACCTCGATTAGACTATGAACTTGTAGGTGTCAGGGGTCACACATCTTTCTTTTCTGTCACCTTC---CCG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156236726 314 + 157873769 GTGGTTGTGGGTGTG-------GCACACTCGCGCTGACTTTGCTTCACATTCGCCCTGACCTGGCCTGGTGCAGTGCTGTCTCCTGTCTCCACTCCCCATCCTCCAAAGATGCCCAGGCTTCATGGGAAATGTGCCCTAAATACCACTTTCCCTTTTCTGGGACCCCAACCCTGCCGTCTTCATCTCCTCCCTCTG-TACCT-ATGGA-AAATGACTCTGCATTTTCAACAGTTCTTTCTAGAGGCTGGGTTTGGGCACCTCGATTAGACTGTGAACTTGTAGGTGTCAGGGGTCACACATCTTTCTTTTCTGTCACTTTC---CCA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170263019 310 + 172585720 GTGGGTGTGGGTGTG-------GCACTCTCGCACTGACTTT-CTTTGCATTCGCCCTGACCTGGCCTGGTGCAGCGCTGTCTCCTGTCTCCACTCCCTATCCTCCAAGGAGGCCCAGGCTTCATGGGAAGCGTGCCCTAAATACCGCTTTCCCTTCTCTGGGACCCTAGCCCTGCTGTCTTCGT---CTCCCTCTG-TACCT-ACGGA-AAAGGACTCTGCAATTTCAACAGTCCTTTCTAGAGGCTGAGTTTGGGCACCTTGATTAGACTGTGAACTTGTAGGTGTCAGGGGTCACACATCTTTCTTTTCTGTCGCCTTC---CTG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169008626 310 - 170955103 GTGGGTGTGGGTGTG-------GCACTCTCGCACTGACTTT-CTTTGCATTCGCCCTGACCTGGCCTGGTGCAGCGCTGTCTCCTGTCTCCACTCCCCATCCTCCAAGGAGGCCCAGGCTTCATGGGAAGCGTGCCCTAAATACCGCTTTCCCTTCTCTGGGACCCTAGCCCTGCTGTCTTTGT---CTCCCTCTG-TACCT-ACGGA-AAAGGACTCTGCAATTTCAACAGTCCTTTCTAGAGGCTGAGTTTGGGCACCTTGATTAGACTGTGAACTTGTAGGTGTCAGGGGTCACACATCTTTCTTTTCTGTCACCTTC---CTG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8295882 310 + 10161646 GTGGGTGTGGGTGTG-------GCACTCTCGCACTGACTTT-CTTTGCATTCGCCCTGACCTGGCCTGGTGCAGCGCTGTCTCCTGTCTCCACTCCCCATCCTCCAAGGAGGCCCAGGCTTCATGGGAAGCGTGCCCTAAATACCGCTTTCCCTTCTCTGGGACCCTAGCCCTGCTGTCTTCGT---CTCCCTCTG-TACCT-ATGGA-AAAGGACTCTGCAATTTCAACAGTCCTTTCTAGAGGCTGAGTTTGGGCACCTTGATTAGACTGTGAACTTGTAGGTGTCAGGGGTCACACATCTTTCTTTTCTGTCACCTTC---CTG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1325328 310 + 3144229 GTGGGTGTGGGTGTG-------GCACTCTCGCACTGACTTT-CTTTGCATTCGCCCTGACCTGGCCTGGTGCAGCGCTGTCTCCTGTCTCCACTCCCCATCCTCCAAGGAAGCCCAGGCTTCATGGGAAGTGTACCCTAAATACCGCTTTCCCTTCTCTGGGACCCTAGCCCTGCTGTCTTCGT---CTCCCTCTG-TACCT-ACGGA-AAAGGACTCTGCAATTTCAACAGTCCTTTCTAGAGGCTGAGTTTGGGCACCTCGATTAGACTGTGAACTCCTAGGTGTCAGGGGTCACACATCTTTCTTTTCTGTCATCTTC---CTG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96604752 310 + 98384682 GTGGGTGTGGGTGTG-------GCACTCTCACACTGATTGT-CTTCGCATTCGCCCTGACCTGGCCTGGTGCAGCGCTGTCTCCTGTCTCCACTCCCCGTCCTCCAAGGAAGCCCAGGCTTCACGGGAAGTGTGCCCTAAATACCGCTTTCCCTTCTCTGGGACCCTAGCCCTGCTGTCTTCGT---CTCCCTCTG-TACCT-ACGGA-AAATGACTCTGCAATTTCAACAGTCCTTTCTAGAGGCTGGGTTTGGGCACCTCGATTAGTCTGTGAACTTGTAGGTGTCAGGGCTCACACATCTTTCTTTTCTGTCACCTTC---CTG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8147446 310 - 10857215 GTGGGTGTGGGTGTG-------GCACTCTCGCACTGACTTT-CTTTGCATTCGCCGTGACCTGGCCTGGTGCAGCGCTGTCTCCTGTCTCCACTCCCCATCCTCCAAGGAAGCCCAGGCTTCATGGGAAGTGTGCCCTAAATACCGCTTTCCCTTCTCTGGGACCCTAGCCCTGCTGTCTTCGT---CTCCCTCTG-TACCT-ACGGA-AAAGGACTCTGCAATTTCAACAGTCCTTTCTAGAGGCTGAGTTTGGGCACCTCGATTAGACTGTGAACTTGTAGGTGTCAGGGGTCACACATCTTTCTTTTCTGTCACCTTC---CTG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15543214 309 - 23502949 GTGGGTGTGGGTGTG-------GCACTCTCACACTGACTTT-CTTTGCATTCGCCCTGATCTGGCCTGGTGCAGCGCTGTCTCCTGTCTCCACTCCC-ATCCTCCAAGGAAGCCCAGGCTTCATGGGATGTGTGCCCTAAATACTGCTTGCCCTTCTCTAGGACCCTAGCCATGACATCTTCGT---CTCCCTCTG-TACCT-ACGGA-AAATGATTCTGCAATTTCAACAGTCCTTTCTAGAGGCTGGGTTTGGGCACCTCGATTAGACTGTGAACTGGTAGGTGTCAGGGGTCACACATCTTTCTTTTCTGTCACCTTC---CTG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169810508 302 + 171630274 GTGGGTATGGGTCTG---------CCACCTGCAC-AGCTCTGCTCCACGTTCTCCCTGGCCTGGCCTGGCGCTGTGGCATCTCCAGTCTCCACTC---ACCCTCCAGGGAAACCCAGGCTTCACGGGAAGTGTGCCCTGAAAACTGCTTTCCTTGCTCTGGGGCCCCAGCCCTGCTGAGTTCAC---CACCCTCTG-TACCC-ACGGA-AAACGACTCTGCAATTTGAACCGTCCTTTCTAGAAGCTGGGTTTTGGCACCCCAATTAGACTGTGAACTTGGAGGTGTCACAGGTCACACATCTTTCTTTTCTGTCACCTTC------ i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1235714 304 - 2905041 gtgggtgtgggtgCG-------GCACACCTGCGC-AACTCTGCTCTGCGTTCTCCTTGGCCGGGCCTGGCTCTGCGGTGTCTTCTGTCTCCACTC---ATCCTCCAGAGAAGCCCAGGTTTCATGGGAAGTCTGACCTAAAAACTGCTTTCCTTGTTCTGGGACCCCAGCCCTGCTGAGTTCAC---CACCCTCTG-CACCT-ACGGA-AAACGACTCTGCAATTTCAACTGTCCTTTCTAGAAGTTGGATTTTGGCACCCCAATTAGACTGTGAACTTGGAGGTGTCACAGGTCACACATCTTTCTTTTCTGTCACCTTC------ i saiBol1.JH378287 I 346 C 0 s cebCap1.NW_016107695v1 1187722 304 - 2164891 GTGGGTGTGGGTGTG-------GCACACCTGCGC-AACTCTGCCCTGAGTTCTCCCTGGCCTGGCCTGGTGCTGCAGTGTCACCTGTCTCCACTC---ATCCTCCAGGGAAGCCCAGGCTTCATGGGAAGTGTGGTCTAAAAACCGCTTTCCCTGCTCTGGGACCCCAGCCCTGCTGAGTTCAC---CACCCTCTG-TACCT-ACGGA-AAACAACTCTGCAATTTCAACCGTCCTTTCTAGAAGCTGGGTTTTGGCACCCCAATTAGGCTGTGACCTTGGAGGTGTCACAGGTCACACATCTTTCTTTTCAGTTACCTTG------ i cebCap1.NW_016107695v1 I 6 C 0 s aotNan1.NW_018494782v1 1424592 314 - 1813869 GTGGGTGTGGGTGTGGATTGTGGCACACCTGCAC-GACTCTGCTCCGCGTTCTCCCTGGCCTGGCCTGGTGCTGTGGTGTCTCCTGTCCCCACTC---ATCCTCCAGGGAAGCCCAGGGTTCACGGGAAGTGTGCCCTAAAAACCGCTTTCTCTGCTCGGGGACCCCAGCCCTGCTGAGTTCAC---CACCCTCCGCTACCT-ACGG--AAACGACTCTGCAATTTCAACCGTCCTTTCTAGAAGCTGGGTTTTGGCACCCCAATTAGACTGTGAACTTGGAGGTGTCACAGGTCACACATCTTTCTTTTCTGTCACCTTCCCC--- i aotNan1.NW_018494782v1 C 0 I 74 s canFam3.chr1 56100662 228 + 122678785 GTCAGAGCAGAGGTG------------CACGTGCTGACCCA-TCCCACACTCACC-------------------------------TCCCCAAACCC-ACCTTCC---------------------------------------------TCTTTCCCTGACCTTCCAGTCCTGCTGCCTTCAT-TATACATTTTG-TTCTTAATGGATAACGGGGTCTGCATTTTC--TGGTCTTTTCTAGGATCCAGATCTCGACACCTCTGGTAGACTACAAACTTCTTGGTATCAAGGATCATGTTTCCCTCTTTTC--TCACCTCC---CTT i canFam3.chr1 C 0 C 0 e dasNov3.JH569188 483526 1638 + 760995 I a score=596128.000000 s hg38.chr6_KB021644v2_alt 7461 91 + 185823 --CCAGTCGGTTTCTGCAACCAACACACACGGTTCGTC-GCTGTGAGTCAGCCTGTGGACTGGAAAGGCGGG----GCATGGCACACAGGGACAGCGC s panTro5.chr6 173462019 91 + 175400573 --CCAGTCGGTTTTTGCAACCAACACACACGGTTCATC-GCTGTGAGTCAGCCTGTGGACTGGAAAGGCGGG----GCATGGCACTCAGGGACAGCGC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171725864 91 + 173848474 --CCAGTCGGTTTTTGCAACCAACACACACGGTTCATC-GCTGTGAGTCAGCCTGTGGACTGGAAAGGCGGG----GCATGGCACACAGGGACAGCGC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11410410 91 - 12463322 --CCAGTCGGTTTCTGCAACCAACACACACGGTTCATC-GCTGTGAGTCAGCCTGTGGACTGGAAAGGCGGG----GCATGGCACACAGGGACAGCGC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156237040 91 + 157873769 --CCAGTCGGTTTCTGCAACCAACACACACGGTTCATC-GCTGTGAGTCAGCCTGTGGACTGGAAAGGCAGG----GCATGGCGCACAGGGACAGCGT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170263329 91 + 172585720 --CCAGTCGGTTTCTGCAACCAACATACGTGGTTCATT-GCCGCGAGTCAGCCTGTGGACTGGGAAGGTGGG----ACATGGCACACGGGGACAGCAC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169008936 91 - 170955103 --CCAGTCGGTTTCTGCAACCAACATACGTGGTTCATT-GCCGCGAGTCAGCCTGTGGACTGGGAAGGTGGG----ACATGGCACACGGGGACAGCAC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8296192 91 + 10161646 --CCAGTCGGTTTCTGCAACCAACATACGTGGTTCATT-GCCGCGAGTCAGCCTGTGGACTGGAAAGGTGGG----ACATGGCACACGGGGACAGCAC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1325638 91 + 3144229 --CCAATCGGTTTCTGCAACCAACATACGTGGTTCATT-GCCGTGAGTCAGCCTGTGGACTGGAAAGGTGGG----ACATGGCACACGGGGACAGCAC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96605062 91 + 98384682 --CCAGTCGGTTTCTGCAACCAACATACGTGGTTCATT-GCCGTGAGTCAGCCTGTGGACTGGAAAGGTGGG----ACATGGCACACGGGGACAGCAC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8147756 91 - 10857215 --CCAGTCGGTTTCTGCAACCAACATACGTGGTTCATT-GCCGTGAGTCAGCCTGTGGACCAGAAAGGTGGG----ACATGGCACACGGGGACAGCAC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15543523 77 - 23502949 --CCAGTCGGTTTCTGCAACCAACATATGAG---------------GTCAGCCTGTGGACTGGAAAGGTGGG----ACATGGCACACGGGGACAGCAC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169810810 76 + 171630274 -------------------CCCACACCCGCGGTTCATC-ACCAGGAGTCAGCCTGTGGACTGGGGGGGCGGGCCCGGTCTGGCACACGGGGTCAGC-- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1236018 76 - 2905041 -------------------TCTGCACCCGCAGTTCATC-ACCAGGAGTCAGCCCGTGCACTGGAGGGGCGGGTCCAGCATGGCATGCAGGGTCAGC-- i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1188026 76 - 2164891 -------------------CCCACACCCGTGGTTCATC-ACCAGGAGTCAGCCTGTGTACTGGAGGGGCGGGCCTGGCATGGCATGCGGGGTCAGC-- i cebCap1.NW_016107695v1 C 0 C 0 s canFam3.chr1 56100890 78 + 122678785 CCACAGGGAATTTGTTCAATCAGCACATGTGGTTCATCTGCTCTAAATGAGCAGGTGTACTAGGAAATTGTG-------TGGTGC------------- i canFam3.chr1 C 0 C 0 e aotNan1.NW_018494782v1 1424906 74 - 1813869 I e dasNov3.JH569188 483526 1638 + 760995 I a score=332916.000000 s hg38.chr6_KB021644v2_alt 7552 38 + 185823 TGAAC-TTTCCAAACCACAGGAAGAAATCAGCATTTTTG s panTro5.chr6 173462110 38 + 175400573 TGAAC-TTTCCAAACCACAGGAAGAAATCAGCATTTTTG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171725955 38 + 173848474 TGAAC-TTTCCAAACCACAGGAAGAAATCAGCATTTTTG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11410501 38 - 12463322 TGAAC-TTTCCAAACCACAGGAAGAAATCAGCATTTTTG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156237131 38 + 157873769 TGAAC-TTTCCAAACCGCAGAAAGAAATCAGCATTTTTG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170263420 37 + 172585720 TGCAC-TTCCCAAACCACAGAAGGAAATCAGCA-TTTTG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169009027 37 - 170955103 TGCAC-TTCCCAAACCACAGAAGGAAATCAGCA-TTTTG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8296283 37 + 10161646 TGCAC-TTCCCAAACCACAGAAGGAAATCAGCA-TTTTG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1325729 37 + 3144229 TGCAC-TTCCCAAACCACAGAAGGAAATCAGCA-TTTTG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96605153 37 + 98384682 TGAAC-TTCCCAAACCACAGAAGGAAATCAGCA-TTTTG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8147847 37 - 10857215 TGCAC-TTCCCAAACCACAGAAGGAAATCAGCA-TTTTG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15543600 37 - 23502949 TGAAC-TTCCCAAACCACAGAAGGAAATCAGCA-TTTTG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169810886 38 + 171630274 TGAAC-TTCCCAAACCACAGAAGGAAACTGGAGTTTTTG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1236094 38 - 2905041 TGAAC-TTCCCAAACCGCAGAAAGAAATTGGCATTCTTG i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1188102 38 - 2164891 TGAAC-TTCCCAAACCGCAGAAGGAAATTGGCGTTTTTG i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1424980 37 - 1813869 TGAAC-TTCCC-AACCGCAGAAGGAAATCGGCGTTTTTG i aotNan1.NW_018494782v1 I 74 I 16 s canFam3.chr1 56100968 39 + 122678785 TAAACATTTCCCAATGCTAGAGTGGAATAAAGACTTTTC i canFam3.chr1 C 0 C 0 e dasNov3.JH569188 483526 1638 + 760995 I a score=158061.000000 s hg38.chr6_KB021644v2_alt 7590 16 + 185823 GAAGAACAAGTGAGTG s panTro5.chr6 173462148 16 + 175400573 GAAGAACAAGTGAGTG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171725993 16 + 173848474 GAAGAACAAGTGAGTG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11410539 16 - 12463322 GAAGAACAAGTGAGTG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156237169 16 + 157873769 GAAGAACAAGTGAGTG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170263457 16 + 172585720 GAAGAACAAGTGAGTG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169009064 16 - 170955103 GAAGAACAAGTGAGTG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8296320 16 + 10161646 GAAGAACAAGTGAGTG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1325766 16 + 3144229 GAAGAACAAGTGAGTG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96605190 16 + 98384682 GAAGAACAAGTGGGTG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8147884 16 - 10857215 GAAGAACAAGTGAGTG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15543637 16 - 23502949 GAAGAACAAGTGAGTG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169810924 16 + 171630274 GAGGAACACGTGAGTG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1236132 16 - 2905041 GAGGAACACGTGAGTG i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1188140 16 - 2164891 GAGGAACACGTGAGTG i cebCap1.NW_016107695v1 C 0 C 0 s canFam3.chr1 56101007 16 + 122678785 AAAGAATGAATGAATG i canFam3.chr1 C 0 C 0 e aotNan1.NW_018494782v1 1425017 16 - 1813869 I e dasNov3.JH569188 483526 1638 + 760995 I a score=1893213.000000 s hg38.chr6_KB021644v2_alt 7606 204 + 185823 GATGAATGAAT--------------GCCGTCGAGATGGCTGAGAAAACAGTTGCATGGAAGGG--------------------AGGAGAAATTCTTCTGGTTGTGGGGGAGG-------TGATTTgggattaggaaaagcttcatgg--aagaattgacatctgttctgggATGAGATTTTGATGTTTGGAGACAATGCAGAACA----TTTCATGAACAAGGAATAAAACGCATGGTTTTCTGAGAaaaa s panTro5.chr6 173462164 204 + 175400573 GATGAATGAAT--------------GCCGTCAAGATGGCTGAGAAGACAGTCGCATGGAAGGG--------------------AGGAGAAATTCTTCTGGTTGTGGGGGAGG-------TGATTTgggattaggaaaagcttcatgg--aagaattgacatctgttctgggATGAGATTTTGATGTTTGGAGACAATGCAGAACA----TTTCATGAACAAGGAATAAAACGCATGGTTTTCTGAGAaaaa i panTro5.chr6 C 0 C 0 s panPan2.chr6 171726009 204 + 173848474 GATGAATGAAT--------------GCCGTCAAGATGGCTGAGAAGACAGTCGCATGGAAGGG--------------------AGGAGAAATTCTTCTGGTTGTGGGGGAGG-------TGATTTgggattaggaaaagcttcatgg--aagaattgacatctgttctgggATGAGATTTTGATGTTTGGAGACAATGCAGAACA----TTTCATGAACAAGGAATAAAACGCATGGTTTTCTGAGAaaaa i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11410555 203 - 12463322 GATGAATGAAT--------------GCCATCGAGATGGCTGAGAAGACAGTCACATGGAAGGG--------------------AGGAGAAATTCTTCTGGTTGT-GGGGAGG-------TGATTTgggattaggaaaagcttcatgg--aagaattgacatctgttctgggATGAGATTTTGATGTTTGGAGACAATGCAGAACA----TTTCATGAACAAGGAATAAAACGCATGGTTTTCTGAGAaaaa i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156237185 204 + 157873769 GATGAATGAAT--------------GCCATCGAGATGGCTGAGAAGACAGTCACATGGGAGGG--------------------AGGAGAAATTCTTCTGGTTGTGGGGGAGG-------TGATTTgggattagggaaagcttcatgg--aagaattgacatctgttctgggATGAGATTTTGATGTTTGGAGACAATGCAGAACA----TTTCATGAACAAGGAATAAAACTCATGGTTTTCTGAGAAAAA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170263473 203 + 172585720 GATGAATGAAT--------------GCGGTTGAAATGGCTGAGAAGACAGTCGCATGGGAGGG--------------------AGGACAAATTCTTCTGGTTGTGGGGGAGG-------TGATTCGGGATAAGG-AAAACTTCGTGG--AAGAATTGACATCTGTTCTGGGATGAGATTTTGATGTTTGGAGACATTGCAGAACA----TTTCATGAACAAGGAATAAAATGCATGGTTTTCTGAGAAAAA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169009080 203 - 170955103 GATGAATGAAT--------------GCGGTTGAAATGGCTGAGAAGACAGTCGCATGGGAGGG--------------------AGGACAAATTCTTCTGGTTGTGGGGGAGG-------TGATTCGGGATAAGG-AAAACTTCGTGG--AAGAATTGACATCTGTTCTGGGATGAGATTTTGATGTTTGGAGACATTGCAGAACA----TTTCATGAACAAGGAATAAAATGCATGGTTTTCTGAGAAAAA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8296336 203 + 10161646 GATGAATGAAT--------------GCGGTTGAAATGGCTGAGAAGACAGTCGCATGGGAGGG--------------------AGGACAAATTCTTCTGGTTGTGGGGGAGG-------TGATTCGGGATAAGG-AAAACTTCGTGG--AAGAATTGACATCTGTTCTGGGATGAGATTTTGATGTTTGGAGACATTGCAGAACA----TTTCATGAACAAGGAATAAAATGCATGGTTTTCTGAGAAAAA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1325782 203 + 3144229 GATGAATGAAT--------------GCGGTTGAAATGGCTGAGAAGACAGTCGCATGGGAGGG--------------------AGGACAAATTCTTCTGGTTGTGGGGGAGG-------TGATTTGGGATAAGG-AAAACTTCGTGG--AAGAATTGACATCTGTTCTGGGATGAGATTTTGATGTTTGGAGACAATGCAGAACA----TTTCATGAACAAGGAATAAAATGCATGGTTTTCTGAGAAAAA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96605206 204 + 98384682 GATGAATGAAT--------------GCAGTTGAAATGGCTGAGAAGACAGTTGCATGGGAAGG--------------------AGGACAAATTCTTCTGGTTGTGGGGGAGG-------TGATTTGGGTTTAGGAAAAACTTCATGG--AAGAATTGACATCTGTTCTGGGATGAGATTTGGATGTTTGGAGACAATGCAGAACA----TTTCATGAACAAAGAATAAAATGCATGGGTTTCTGAGAAAAA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8147900 203 - 10857215 GATGAATGAAT--------------GCGGTTGAAATGGCTGAGAAGACAGTCGCATGGGAGGG--------------------AGGACAAATTCTTCTGGTTGTAGGGGAGG-------TGATTTGGGATAAGG-AAAACTTCATGG--AAGAATTGACATCTGTTCTGGGATGAGATTTTGATGTTTGGAGACAATGCAGAACA----TTTCATGAACAAGGAATAAAATGCATGGTTTTCTGAGAAAAT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15543653 204 - 23502949 GATGAATGAAC--------------GCCGTTGAAATGGCTGAGAAGACAGTCACATGGGAGGG--------------------AGGACAAATTCTTCTGGTTGAGGGGGAGG-------TGAtgtgggattaggaaaagcttcatgg--aagaattgacatttgttctgggaTGAGATTTTGATGTCTGGAGACAATGCAGAACA----TTTCATGAACAAGGAATAAAATGCATGGTTTTCTGAGAAAAA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169810940 204 + 171630274 GAC-AAGGACT--------------GCCGTGGACATGACAGAGAAGACAG-TGCAT-GCAGGG--------------------AGGAGAGATTCTTCTGGATTCGGGGGAGG-------TGGTTTGGGATTAGGAAA-GCTTCATGG--GAGAATTGACATTTGTTCTGGGGTGAGATTTTGATGTTTGGAGACAATGCAGAATGTTATTTTCATGAACAAGGAGTAAAATGTATGGTTTTCTTAGGAAAA i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1236148 206 - 2905041 GAC-AAGGACC--------------GCCATGGACGTGACCGAGAAGACAG-CGCATAGCAGGG--------------------AGGAGAGATTCTTCTGGTTGCGGGGGAGG-------TGGTTTGGGATTAGCACATGCTTCATGG--GAGAATTGACATTTGTTCTGCGGTGAGATTTTGATGTTTGGAGACAATGCAGAATGTTATTTTCATGAATAAGGAATAAAATGTATGGTTTTCTCAGGAAAA i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1188156 206 - 2164891 GAC-AAGGACT--------------GCCGTGGACATGACGGAGAAGAGAG-CGCATAGCAGGG--------------------AGGAGAGATTCTTCTGTCTGCAGGGGAGG-------TGGTTCGGGATTAGGAAAAGCTTCATGG--GAGAATTGACATTTGTTCTGGCGTGAGATTTTGATGTTTGGAGACAATGCAGAATGCTATTTTCATGAACGAGGAACAAAAGGTATGGTTTTCTCAGGAAAA i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1425033 207 - 1813869 GACGAAGGACT--------------GCCGTGGACATGACCGAGAAGACAG-CGCATAGCAGGG--------------------AGGAGAGAGTCTTCTGGTTGCGAGGGAGG-------TGGTTTGGGATTAGGAAAAGCTTCATGG--GAGAATTGACATTTGTTCTGGGGTGAGATTTGGATGTTTGGAGACGATGCAGAATGTTATTTTCATGAACAAGGAATAAAATGTGTGGTTTTCTCAGGAAAA i aotNan1.NW_018494782v1 I 16 C 0 s canFam3.chr1 56101023 251 + 122678785 GCTAAGGGGATCAGAGACATGGCTGGAAGGTGACATTGCTGAGGGGTCGGCTGCCTAGGAAGGCTTTCTGTCCCAGGTAGGATGGGGCACCTGTCCTGGGCTGGAAGGGACACATGTCCCAGGCTGGGATGGGACACCTGTTCTGGGCTGGGATTGGGCACCTGTCCTGGGATGAGATTTTGATTATTGGAGAAAATGTGAAATTCTGTATCAATGAACAAGAAATAAAACACACAATTTTCTATGGAAAA i canFam3.chr1 C 0 I 12 e dasNov3.JH569188 483526 1638 + 760995 I a score=2341531.000000 s hg38.chr6_KB021644v2_alt 7810 328 + 185823 agtaaataatctgggccaggtgcagcagctcacgcctgtcatcccagcacgttgggaggttgaggagggaggatcacttgagcccaggagttcaaaaccagccaggagaacatagggagactcccatatctacaaaataaaaataaaaataaaaattagctaggcatTATTATATTA-TAAAAAC-AAAAATAAAAAAATATTTTATAAAATAATATTA------AAATAAAAATtagctcatgcctgtggtctcagctactcagtaggctgaggtgggaggatcacttgagcccaggaggccaaggctgcagaaagctgtgattgtgcccctcac s panTro5.chr6 173462368 328 + 175400573 agtaaataatctgggccaggtgcagcagctcacgcctgtcatcccagcacgttgggaggtcgaggagggaggatcacttgagcccaggaattcaaaaccagccaggagaacatagggagactcccatatctacaaaataaaaataaaaataaaaattagctaggcatTATTATATTA-TAAAAAC-AAAAATAAAAAAATATTTTATAAAATAATATTA------AAATAAAAATtagctcacgcctgtggtcccagctactcagtaggctgaggtgggaggatcacttgagcccaggaggccaaggctgcagaaagctgtgattgtgcccctcac i panTro5.chr6 C 0 C 0 s panPan2.chr6 171726213 328 + 173848474 agtaaataatctgggccaggtgcagcagctcacgcctgtcatcccagcacgttgggaggtcgaggagggaggatcacttgagcccaggaattcaaaaccagccaggagaacatacggagactcccatatctacaaaataaaaataaaaataaaaattagctaggcatTATTATATTA-TAAAAACAAAAAATAAAAAAATATTTTATAAAATAATATT-------AAATAAAAATtagctcacgcctgtggtcccagctactcagtaggctgaggtgggaggatcacttgagcccaggaggccaaggctgcagaaagctgtgattgtgcccctcac i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11410758 327 - 12463322 agtaaagaatctgggccaggtgcagcagctcacgcctgtcatcccagcacgttgggaggtcgaggagggaggatcacttgagcccaggagttcaaaaccagccaggagaacatagggagactcccatatctacaaaacaaaaataaaaataaaaattagctaggcatTATTATATTA-TAAAAAC-Aaaaat-aaaaaatattttataaaataatatta------aaataaaaATtagctcacgcctgtggtcccagctactcagtaggctgaggtgggaggatcacttgagcccaggaggccaaggctgcagaaagctgtgattgtgcccctcac i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156237389 321 + 157873769 AGTAAATAATCTGggcaggatgcagcagctcacgcctgtcatcccagcatgttgggaggcccaggagggaggatcgcttgagcccaggagttcaagaccagccaggggaacatagggagactcccatctctac------aaaataaaaataaaaattagccaggcatTATTATATTA-TAAAAAC-Aaaaat-aaaaaatattttataaaataatatta------aaataaaaATtagctcacgcctgtggtcccagctactcagcaggctgaggtgggaggatcacttgagcccaggaggccaaggctacagagagctgtgatcgtgcccctcac i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170263676 251 + 172585720 AGTAAATAATCTGggccgggtgcagcagctcacgcttgtcatcctagcactctgggaggccaaggcaggaggatcgcttgagcccaggagttcaagaccagccaagggaacatagggagactcccatctctac-----------------------------------------------aaaat-aaaaat-------------------------------------aaaaattagctcacgcctgtggtcccagctactcagtaggctgaggtgggaggatcacttgagcccaggaggccaaggctgcagagagctgtgactgtgcccctcac i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169009283 251 - 170955103 AGTAAATAATCTGggccgggtgcagcagctcacgcttgtcatcctagcactctgggaggccaaggcaggaggatagcttgagcccaggagttcaagaccagccaagggaacatagggagactcccatctctac-----------------------------------------------aaaat-aaaaat-------------------------------------aaaaattagctcacgcctgtggtcccagctactcagtaggctgaggtgggaggatcacttgagcccaggaggccaaggctgcagagagctgtgactgtgcccctcac i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8296539 251 + 10161646 AGTAAATAATCTGggccgggtgcagcagctcacgcttgtcatcctagcactctgggaggccaaggcaggaggatcgcttgagcccaggagttcaagaccagccaagggaacatagggagactcccatctctac-----------------------------------------------aaaat-aaaaat-------------------------------------aaaaattagctcacgcctgtggtcccagctactcagtaggctgaggtgggaggatcacttgagcccaggaggccaaggctgcagagagctgtgactgtgcccctcac i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1325985 234 + 3144229 AGTAAATAATCTGggctgggtgcagcagctcacgcctgtcatcctagcactctgggaggccgaggcaggaggatcgcttgagcccaggagttcaagaccagccaggggaacacagggagactccc-----------------------------------------------------------------at-------------------------------------aaaaattagctcacgcctgtggtcccagctactcagtaggctgaggtggaaggatcacttgagcccaggaggccaaggctgcagagagctgtgactgtgcccctcac i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96605410 251 + 98384682 AGTAAATAATCTGggccaggtgcagcagctcacgcctgtcatcctagcactctgggaggccaaggcaggaggatcgcttgagcccaggagttcaagaccagccaggggaacacagggagactcccatctctac-----------------------------------------------aaaat-aaaaat-------------------------------------aaaaattagctcaagcctgtggtcccagctactcagtaggctgaggtgggaggatcacttgagcccaggaggccaaggctgcagagagctgtgactgtgcccctcac i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8148103 251 - 10857215 AGTAAATAATCTGggccgggtgcagcagctcacgcctgtcatcctagcactctgggaggccaaggcaggaggatcgcttgagcccaggagttcaagaccagccaggggaacacagggagactcccatctctac-----------------------------------------------aaaat-aaaaat-------------------------------------aaaaattagctcacgcctgtggtcccagctactcagtaggctgaggtgggaggatcactggagcccaggaggccaaggctgcagagagctgtgactgtgcccctcac i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15543857 251 - 23502949 GGTAAATAATCTGggccgggtgcagcagctcacgcctgtcatcctagcactttgggaggccgaggcaggaggatcgcttgagcccaggagttcaagaccagccaggggaacatagggagactcccatctctac-----------------------------------------------aaaat-aaaaat-------------------------------------aaaaattagctcacgcctgtggtcccagctactcagtcggctgaggtgggaggatcacttgagcccaggaggccaaggctgcagagacctgtgactgtgcccctcac i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169811144 325 + 171630274 AGTAAATAATCTGggctgggtgcagcagtccacacgtgtcattctggcacattggaaggttgaggcggggtgattgcttcagcccaggggttcaagtccagccgtggccacacagggagattcccttctctac------aaaataaaaataaaaaTTAGCCA-GCATTGTTATAGTATtaaaaac-aaaaat-aaaaaa-gtcttataaaataaaattaaaatataaataaaaatgagctcacgcctgtggtcccagctactcagtaggctgaggtgggaggatcacttgggcccacgaggttgaggctgcagagagctgtgactgca-ccctcac i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1236354 325 - 2905041 GGTAAATAATCTGggctgggcgcagcagtccacacctgtcattccagcactttggaaggttgaggcgggg-aattgctttagcccaggagttcaagtccagccatggcaacacagggagactcccatctctac------aaaataaaaacaagaattagcca-gCATTGTTAAAGTA-TACAAAC-AGAAAT-AAAAAGCATCTTATAAAATAGCATTAAAATATAAATAAAAATtagctcatgcctgtggtcccagctactcagtaggctgaggtgggaagatcacttgagcccttgacgtcaaggctgcagagagctgtgattgcacccctcac i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1188362 325 - 2164891 GGTAAATAATCTGggctgggcacagcagtccacacctgtcattccagcgctttggaagg-tgaggcaaggggatcgcttcaacccaggagttcaagtccagccatggcaacacagggagactcccatctctac------aaaataaaaataaaaattagcca-gCATTGTTCTAGTa-taaaaac-aaaaat-aaaaaacgtctaataaaataacattagaatgtaaataaaaATtagctcacacctgtggtcccagctactcagtaggctgaggtgggaagatcacttaagcccacgaggtcgaggctgcagagagctgtgattgcacccctcac i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1425240 326 - 1813869 GGTAACTAATCTGggccgggtgcagcagtccacacctgtcattccagcactttggaaggttgaggtggggggatcgcttcagcccaggagttcaagtccagccatggcaacgcagggagactcccatctctac------aaaataaaaataaaaattagcca-gCATTGTTATAGTA-TAAAAAC-Aaaaat-aaaaaacatcttatagaataacattaaaatataaataaaaATtagctcacgcctgtggtctcagctactcagtaggctgaggtgggaggatcacttgagcccacgaggtcgaggctgcagagagctgggattgcacccctcac i aotNan1.NW_018494782v1 C 0 C 0 e dasNov3.JH569188 483526 1638 + 760995 I e canFam3.chr1 56101274 12 + 122678785 I a score=2680252.000000 s hg38.chr6_KB021644v2_alt 8138 263 + 185823 ttcagcTATAAAGGGACAGCTGAGTTTCT-AACAAAGCTTAATTCATCAAAGCAGTATGTTTCAATGACATACAAGAGACTAGCTTTAGAGAGTTTAT------------CAAAGTAA--CTTCCCACAAGTATTTTAATAATA----AATATTCTAAGTAGCTTTAAGCTGCATTTATGTACAGTGAAATCATAATTGTGTTGATTTTAAAAAAAGAACCAAAAAGCCCCCTAAAAGCTTCTGTTGTCTTTCATTCTGCATACCCGGGTGCCTGGGACTCC s panTro5.chr6 173462696 263 + 175400573 ttcagcTATAAAGGGACAGCTGAGTTTCT-AACAAAGCTTAATTCATCAAAGCAATATGTTTCAATGACATACAAGAGACTAGCTTTAGAGAGTTTAT------------CAAAGTAA--CTTCCCACAAGTATTTTAATAATA----AATATTCTAAGTAGCTTTAAGCTGCATTTATGTACAGTGAAATCATAATTGTGTTGATTTTTAAAAAAGACACAAAAAGCCCCCTAAAAGCTTCTGTTGTCTTTCATTCTGCATACCCGGGTGCCTGGGACTCC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171726541 263 + 173848474 ttcagcTATAAAGGGACAGCTGAGTTTCT-AACAAAGCTTAATTCATCAAAGCAATATGTTTCAATGACATACAAGAGACTAGCTTTAGAGAGTTTAT------------CAAAGTAA--CTTCCCACAAGTATTTTAATAATA----AATATTCTAAGTAGCTTTAAGCTGCATTTATGTACAGTGAAATCATAATTGTGTTGATTTTTTAAAAATACCCAAAAAGCCCCCTAAAAGCTTCTGTTGTCTTTCATTCTGCATACCCGGGTGCCTGGGACTCC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11411085 263 - 12463322 ttcagcTACAAAGGGACAGCTGAGTTTCT-AACAAAGCTTAATTCATCAAAGCAATATGTTTCAATGACATACAAGAGACTAGCTTTAGAGAGTTTAT------------CAAAGTAA--CTTCCCACAAGTATTTTAATAATA----AATATTCTAAGTAGCTTTAAGCTGCATTTATGTACAGTGAAATCATAATTGTGTTGATTTTTTAAAAAGACCCAAAAAGCCCCCTAAAAGCTTCTGTTGTCTTTCATTCTGCATACCCGGGTGCCTGGGACTCC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156237710 260 + 157873769 ttcagcTATAAAGGGTCAGCTGAGTTTCT-AAAAAAGCTTAATTCATCAAAGCA--ATGTTTCAATGACATACAAGAGACTAGCTTTAGAGAGTTTAT------------CAAAGTAA--CTTCCCACAAGTATTATAATAATA----AATATTCTAAGTAGCTTTAAGCTGCATTTGTGTACAGTGAAATCATAATTGTGTTGATTTT-AAAAAAGAACCAAAAAGCCCCCTAAAAGCTTCTGTTGTCTTTCATTCTGCATACCCGGGTGCCTGGGACTCC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170263927 262 + 172585720 ttcagcTATAAACGGACAGCTGAGTTTCT-AATAAAGCTGAATTCATCACAGCAATATGTTTCAATGAGATGAAAGAGACTAGCTTTAGAGAGTTTAT------------CAAAGTAA--CTTCCCACAAGTATTTTAATAATA----AATATTCTAAGTAGCTTTAAGCTGCATTTATGCACAGTGAAATCATAATTGTGTTGATTTT-AAAAAAGAACCAAAATGCCCCCTGAAAGCTTCTGTTGTCTTTCATTCTGCATACCCAAGTGCCTGGGACTCC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169009534 262 - 170955103 ttcagcTATAAACGGACAGCTGAGTTTCT-AATAAAGCTGAATTCATCACAGCAATATGTTTCAATGAGATGAAAGAGACTAGCTTTAGAGAGTTTAT------------CAAAGTAA--CTTCCCACAAGTATTTTAATAATA----AATATTCTAAGTAGCTTTAAGCTGCATTTATGCACAGTGAAATCATAATTGTGTTGATTTT-AAAAAAGAACCAAAAAGCCCCCTGAAAGCTTCTGTTGTCTTTCATTCTGCATACCCAAGTGCCTGGGACTCC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8296790 262 + 10161646 ttcagcTATAAACGGACAGCTGAGTTTCT-AATAAAGCTTAATTCTTCACAGCAATATGTTTCAATGAGATGAAAGAGACTAGCTTTAGAGAGTTTAT------------CAAAGTAA--CTTCCCACAAGTATTTTAATAATA----AATATTCTAAGTAGCTTTAAGCTGCATTTATGCACAGTGAAATCATAATTGTGTTGATTTT-AAAAAAGAACCAAAAAGCCCCCTGAAAGCTTCTGTTGTCTTTCATTCTGCATACCCAAGTGCCTGGGACTCC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1326219 262 + 3144229 ttcagcTATAAACAGACAGCTGAGTTTCT-AATAAAGCTTAATTCATCACAGCAATATGTTTCAATGAGATGAAAGAGACTAGCTTTAGAGAGTTTAT------------CAAAGTAA--CTTCCCACAAGTATTTTAATAATA----AATATTCTAAGTAGCTTTAAGCTGCATTTATGCACAGTGAAATCATCATTGTGTTGATTTT-TAAAAAGAACCAAAAAGCCCCCTGAAAGCTTCTGTTGTCTTTTGTTCTGCATACCCGAGTGCCTGGGACTCC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96605661 262 + 98384682 ttcagcTATAAACGGACAGCTGAGTTTCT-AATAAAGCTTAATTCATCACAGCAATATGTTTCAATGAGATGAAAGAGACTAGCTTTAGAGAGTTTAT------------CAAAGTAA--CTTCCCACAAGTATTTTAATAATA----AATACTCTAAGTAGCTTTAAGCTGCATTTATGCACAGTGAAATCATAATTGTGTTGATTTT-TAAAAAGAACCGAAAAGCCCCCTGAAAGCTTCTGTTGTCTCTCGTTCTGCATACTTGAGTGCCTGGGACTCC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8148354 262 - 10857215 ttcagcTATAAACGGACAGCTGAGTTTCT-AATAAAGCTTAATTCATCACAGCAATATGTTTCAATGAGATGAAAGAGACTAGCTTTAGAGAGTTTAT------------CAAAGTAA--CTTCCCACAAGTATTTTAATAATA----AATATTCTAAGTAGCTTTAAGCTGCATTTATGCACAGTGAAATCATAATTGTGTTGATTTT-AAAAAAGAACCAAAAAGCCCCCTGAAAGCTTCTGTTGTCTTTCGTTCTGCATACCCGAGTGCCTGGGACTCC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15544108 262 - 23502949 ttcagcTATAAACGGACAGCTGAGTTTCT-AACAAGGCTTAATTCATCACAGCAGTATGTTTCAATGAGATGAAAGAGACTAGCTTTAGAGAGTTTAT------------CAAAGTAA--CTTCCCACAAGTATTTTAATAATA----AATATTCTAAGTAGCTTTAAGCTGCATTTATGCACAGTGAAATCATAATTGTGTTGATTTT-AAAAAAGAACCAAAAAGCCCCCTGAAAGCTTCTGTTGTCTTTCATTCTGCATACCCGAGTGCCTGGGACTCC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169811469 261 + 171630274 ttcagcTACAAAGGGACAGCTGAGTTTCT-AACCAAGCTTAATTTATCAAAGCAGTATGTTTCAA-----------AGACTAGCTTTAGAGAGTTTATAACAGGCAAAAACAAAGTAA--TTTCCCACAAGTATTTTAACAATA----AATA-TCTAAGAAGCTTTAAGCTGCATTTATGCACACTGAAATAATAACTGTGTTGATTTT-AAAGAAGGGCCAAAAAG-CCCCTAAAAGCTTCTGTTGTCTATCATCCTGCATGCCCGGGTGCCTGGGATGCT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1236679 273 - 2905041 ttcagcTATAAAGGGACAGCTGAGTTTCT-AACAAAGCTTAATTCATCAAGGCAATGTGTTTCAATGAGATAAAAGAGACTAGCTTTAGAGAGTTTATCACAGGCAAAAACAAAGTAA--TTTCCCACAAGTATTTTAGCAACA----AATA-TCTAAGTAGCTTTAAGCTGCATTTATGCACACTGAAATAGTAATTGTGTTGATTTT-AAAGAAGGACTACAAGGCCCCCTAAAAGCTTCTGTTGTCTATCATCCTGCATACCCGGGTGCCTGGGACTCT i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1188687 273 - 2164891 ttcagcTGTAAAAGGACAGCCGAGTTTCT-AACAAAGCTTAATTCACCAAAGCAATGTGTTTCAATGAGATAAAAGAGACTAGCTTTAGAGAGTTTATCACATGCAAAAACAAAGTAA--TTTCCCACAAGTATTTTAACAATA----AATA-TCTAAGTAGCTTTAAGCTGCATTTATGCACACTGAAATAATAATTGTGTTGATTTT-AAAGAAGGACCAAAAAGCCCCCTAAAAGCTTCTGTTGTCTATCATCCTGCATACCCGGGAGCCTGGGACTCT i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1425566 272 - 1813869 ttcagcTATAAAGGGACAGCTGAGTTTCT-AACAAAGCTTAATTCATCAGAGCAATATGTTTCAAGGAGATAAAAGAGACTAGCTTTAGAGAGTTTATCACAGGCAAAAACAAAGTAA--TTTCCCACAAGTATTTTAACAATA----AATA-TCTAAGTAGCTTTAAGCTGCATTTATGCACACTGAAATAATAATTGTGTTGATTTT-AAAGAAGGCCCAAAAAG-CCCCCAAAAGCTTCTGTTGTCTGTCATCCTGCATACCCGGGTGCCTGGGACTCT i aotNan1.NW_018494782v1 C 0 C 0 s canFam3.chr1 56101286 247 + 122678785 TTCTGCTATAAAA----ATCTGAGTTCCCAAACAAAGCTTAATTCATCAAAACAGTA-GTTTCCATAAAATAAAAGAGGCTAGCTTTGGAAAATTTATGAAAGACAATAACAAAGTCATTTTTCTTCTAGGTATTTTAATAATATTTTAACATTTTATGTAGTTTTGAGCTGCATGTGTACACTCTGAAATAATAACTTTGTTAAT----AAGAATGGACCCAAAA----CCCTAAAGCTTCT----------------------CAGGTGCCTGAGATTCC i canFam3.chr1 I 12 I 9 e dasNov3.JH569188 483526 1638 + 760995 I a score=4422453.000000 s hg38.chr6_KB021644v2_alt 8401 456 + 185823 T--GCTATTTTTGACCTTGACCTTGCAAGTTTACTGCAGAAGAATTCACAAATTCCAGTGGTAAACAAAAGAAGAAAAGAACCAGATGGCACCAGATAGCTGTTCTCTC-AA--AAAAGGAGCTCTGCGAACCCTGTCTTTTCCACTTCA-------------------------GCTTTCCAACACAATGGAGTTTGTaccatataattatttccatcaaaccaggatactttcaaaactggaaaaaggattgttactgtgggaccacaggcctcaatcaggagtttcccgggcaaaGGTGGATGAATGTCAAATGCCAGTCGTGTTCTCTAATCAATTAATCATGCTTTGCTGAATTTGAGTGATGGAAACTTGTACCATACAAGAAATGTCAGTACTCAACTGTGGATAAAGCGTCGTCTTCAGGAGGTGAAATCCATGAGGTTGGGAGTAGGTTAAATTGTGAAGGCCTGTGGATACTATTA s panTro5.chr6 173462959 458 + 175400573 TCTGCTATTTTTGATCTTGACCTTGCAAGTTTACTGCAGAAGAATTCACAAATTCCAGTGGTAAACAAAAGAAGAAAAGAACCAGATGGCACCAGATAGCTGTTCTCTC-AA--AAAAGGAGCTCTGCAAACCCTGTCTTTTCCACTTCA-------------------------GCTTTCCAACACAATGGAGTTTGTaccacataattatttccatcaaaccaggatactttcaaaaatggaaaaaggattgttactctgggaccacaggcctcaatcaggagtttcccaggcaaaTGTGGATGAATGTCAAATGCCAGTCATGTTCTCTAATCAATTAATCATGCTTTGCTGAATTTGAGTGATGGAAACTTGTACCATACAAGAAATGTCAGTACTCAACTGTGGATAAAGCGTCGTCTTCAGGAGGTGAAATCCATGAGGTTGGGAGTAGGTTAAATTGTGAAGGCCTGTGGATACTATTA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171726804 458 + 173848474 TCTGCTATTTTTGACCTTGACCTTGCAAGTTTACTGCAGAAGAATTCACAAATTCCAGTGGTAAACAAAAGAAGAAAAGAACCAGATGGCACCAGATAGCTGTTCTCTC-AA--AAAAGGAGCTCTGCAAACCCTGTCTTTTCCACTTCA-------------------------GCTTTCCAACACAATGGAGTTTGTaccacataattatttccatcaaaccaggatactttcaaaaatggaaaaaggattgttactctgggaccacaggcctcaatcaggagtttcccaggcaaaTGTGGATGAATGTCAAATGCCAGTCATGTTCTCTAATCAATTAATCATGCTTTGCTGATTTTGAGTGATGGAAACTTGTACCATACAAGAAATGTCAGTACTCAACTGTGGATAAAGCGTCGTCTTCAGGAGGTGAAATCCATGAGGTTGGGAGTAGGTTAAATTGTGAAGGCCTGTGGATACTATTA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11411348 458 - 12463322 TCTGCTATTTTTGACCTTGACCTTGCAAGTTTACTGCAGAAGAATTCACAAATTCCAGTGGTAAACAAAAGAAGAAAAGAACCAGATGGCACCAGATAGCTGTTCTCTC-AA--AAAAGGAGCTATGCGAACCCTGTCTTTTCCACTTCA-------------------------GCTTTCCAACACAATGGAGTTTGTaccatataattatttccatcaaaccaggatactttcaaaaatggaaaaaggattgttactctgggaccacaggcctcaatcaggagtttcccaggcaaaTGTGGATGAATGTCAAATGCCAGTCATGTTCTCTAATCAATTAATCATGCTTTGCTGAATTTGAGTGATGGAAACTTGTACCATAAAAGAAACGTCAGTACTCAACTGTGGATAAAGCGTCGTCTTCAGGAGGTGAAATCCATGAGGCTGGGAGTAGGTTAAATTGTGAAGGCCTGTGGATACTATTA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156237970 458 + 157873769 TCTGCTATTTTTGACCTTGACCTTGCAAGTTTACTGCAGAAGAATTCAGAAATTCCAGTGGTAAACAAAAGAAGAAAAGAACCAGATGGCACCAGATAGCTGTTGTCTCAAA--AAAAGGAGCTCTGCGAACCCTGTCTTTTCCACTTCA-------------------------GCTTTCCAACACAATGGAGTTTGTaccatataattatttccatcaaaccaaaatgctttcaaaaatggaaaaaggattattactctgggaccacaggcctcaatcaggagtttcccaggcaaaTGTGGATGGGTATCAAATGCCAGTCATGTTCTCTAATCAATTAATCATGTTTTGCTGAATTTGAGTGATGGAAACTTGTACCATACAAGAAATGTCAGTACTCAACTGTGGAGAAAGCGTCGTCTTCAGGAGGTGAAATCCATGAGGTTGGGAGTAGGTTAAATTGTGAAGGCC-GTGGATACTATTA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170264189 456 + 172585720 TCTGCTATTTTTGACCTTGACCTTGCAAGTTTACTGCAGAAGAATTCACAAATTCCAGCGGTAAACAAAAGAAGAAAAGAACCAGATGGCACCAGATAGCCGTTCTCTC-AA--GAAAGGAGCTCTGCGAACCCTGTCTTTTGCACTTCA-------------------------GCTTTCCAACACAGTGGAGTTTGTACATtataattatttccatcaaaccaggatgctttcaaaaatggaaaaaggattgttactctgggaccacaggcctcagtcaggagtttcccaggcaaaTGTGGATGAATATCAAGTGCCAGTCATGTTCTCTAATTAATTAATCATGCTTTGCTGAATTTGAGTGATGGAAACTTGTATCATATAAGAAATACCGGTACTCGAC--TGAATAAAGCGTTGTCTTCAGGAGGTGAAATCCATGAGGTTAGGAGTAAGTTAAATTGTGAAGGCCTGTGGATACTATTA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169009796 458 - 170955103 TCTGCTATTTTTGACCTTGACCTTGCAAGTTTACTGCAGAAGAATTCACAAATTCCAGCGGTAAACAAAAGAAGAAAAGAACCAGATGGCACCAGATAGCCGTTCTCTC-AA--GAAAGGAGCTCTGCGAACCCTGTCTTTTGCACTTCA-------------------------GCTTTCCAACACAGTGGAGTTTGTACATtataattatttccatcaaaccaggatgctttcaaaaatggaaaaaggattgttactctgggaccacaggcctcagtcaggagtttcccaggcaaaTGTGGATGAATATCAAGTGCCAGTCATGTTCTCTAATTAATTAATCATGCTTTGCTGAATTTGAGTGATGGAAACTTGTATCATATAAGAAATACCGGTACTCGACTGTGAATAAAGCGTTGTCTTCAGGAGGTGAAATCCATGAGGTTAGGAGTAAGTTAAATTGTGAAGGCCTGTGGATACTATTA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8297052 458 + 10161646 TCTGCTATTTTTGACCTTGACCTTGCAAGTTTACTGCAGAAGAATTCACAAATCCCAGTGGTAAACAAAAGAAGAAAAGAACCAGATGGCACCAGATAGCTGTTCTCTC-AA--GAAAGGAGCTCTGCGAACCCTGTCTTTTGCACTTCA-------------------------GCTTTCCAACACAGTGGAGTTTGTACATtataattatttccatcaaaccaggatgctttcaaaaatggaaaaaggattgttactctgggaccacaggcctcagtcaggagtttcccaggcaaatgtggacGAATATCAAGTGCCAGTCATGTTCTCTAATTAATTAATCATGCTTTGCTGAATTTGAGTGATGGAAACTTGTATCATATAAGAAATACCGGTACTCGACTGTGAATAAAGCGTTGTCTTCAGGAGGTGAAATCCATGAGGTTAGGAGTAAGTTAAATTGTGAAGGCCTGTGGATACTATTA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1326481 458 + 3144229 TCTGCTATTTTTGACCTTGACCTTGTAAGTTTACTGCAGAAGAATTCACAAATTCCAGTGGTAAACAAAAGAAGAAAAGAACCAGATGGCACCAGATAGCCGTTCTCTC-AG--AAAAGGAGCTCTGCGAAGCCTGTCTTTTGCACTTCA-------------------------GCTTTCCAACACAGTGGAGTTTGTACGTtataattatttccatcaaaccaggatgctttcaaaaatggaaaaaggattgttactctgggaccacaggcctcagtcaggagtttcccaggcaaatgtggacGAATATCAAGTGCCAGTCATGTTCTCTAATTAACTAATCATGCTTTGCTGAATTTGAATGATGGAAACTTGGACCATATAAGAAATATCAGTACTCAACTGTGAATAAAGCGTTGTCTTCAGGAGGTGAAATCCATGAGGTTGGGAGTAGGTTAAATTGTGAAGGCCTGTGGATACTATTA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96605923 458 + 98384682 TCTGCTATTTTTGACCTTGACCTTGCAAGTTTACTGCAGAAGAATTCACAAATTCCAGTGGTAAACAAAAGAAGAAAAGAACCAGATGGCACCAGATAGCCATTCTCTC-AA--GAAAGGAGCTCTGTGAACCCTGTCTTTTGCACTTCA-------------------------GCTTTCCAACACAGTGGAGTTTGTACATtataattatttccatcaaaccaggatgctttcaaaagtggaaaaaggattgttactctgggaccacaggcctcagtcaggagttttccaggcaaatgtggacGAATATCAACTGCCAGTTGTGTTCTCTAATTAATTAATCATGCTTTGCTGAATTTCAGTGATGGAAACTTGTACCATATAAGAAATGTCAGTACTCGACTGTGAATAAAGCGTTGTCTTCAGGAGGTGAAATCCATGAGGTTGGGAGTAGGTTAAATTGTGAAGGCCTGTGGATACTATTA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8148616 458 - 10857215 TCTGCTATTTTTGACCTTGACCTTGCAAGTTTACTGCAGAAGAATTCACAAATTCCAGTGGTAAACAAAAGAAGAAAAGAACCAGATGGCACCAGATGGCCGTTCTCTC-AA--AAAAGGAGCTCTGTGAAGCCTGTCTTTTGCACTTCA-------------------------GCTTTCCAACACAGTGGAGTTTGTACGTtataattatttccatcaaaccaggatgctttcaaaaatggaaaaaggattgttactctgggaccacaggcctcagtcaggaatttcccaggcaaatgtggacGAATATCAAGTGCCAGTCATGTTCTCTAATTAATTAATCATGCTTTGCTGAATTTGAGTGATGGAAACTTGGACCATATAAGAAATACCAGTACTCGACTGTGAATAAAGCGTTGTCTTCAGGAGGTGAAATCCGTGAGGTTGGGAGTAGGTTAAATTGTGAAGGCCTGTGGATACTATTA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15544370 458 - 23502949 TCTGCTATTTTTGACCTTGACCTTGCAAGTTTACTGCAGAAGAATTCACAAATTCCAGTGGTAAACAAAAGAAGAAAAGAACCAGATGGCACCAGATAGCTGTTCTCTC-AA--AAAAAGAGCTCTGCGAACCCTGTCTTTTGCACTTCA-------------------------GCTTTCCAACACAATGGAGTTTGTatcatataattatttccatcaaaccaggatgctttcaaaaatggaaaaaggattgttactctggcaccacaggcctcagtcaggagtttcccaggcaaaTGTGGATGAATATCAAGTGCCAGTCATGTTCTTTAATTAATTAATCATGCTTTGCTGAATTTGAGTGATGGAAACTTGTACCATATAAGAAATGTCAGTACTCGACTGTGGATAAAGCGTCGTCTTCAGGAGGTGAAATCCATGAGGTTTGGGGTAGGTTAAATTGTGAAGGCCTGTGGATACTATTA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169811730 483 + 171630274 TCTGCTAGTTTTGACCTTGACCTTGCAAGTTTACTGAAGAAGAATTCACAAATTCCAGTGATAAACAAAAGGAGAAAAGAACCAGATGGCACTGGATAGCTGTTCTCTC-AAA-AAAAGGCGCTCTGTGAACACTGTCTTTTGCACTTCAGTTCCCTCGGGCTTTCTCGGTGCATGCTCTCCAACACAACGGAGTTTGTaccacatagttttttcaatcaaaccaggatcctttcaaaaatggaaaaaggattgctactctgggatgacaggcctcactcaggaatttcccaggcaaaTGTGGGTGAATCTCAAGTGCCAGTCATATTCTCTAATCAATTACTCATGCTTTGCTAAATCTGAGTAATGAAAACTTGCACCATAAAAGAAGTGTCAGTACTCAGCT-CAGAGAAAGCATGGACTTCAGGAGGTGACATCCATGAGGTTGGGAGTAGGTTAAATTGTGAAGTCCTATGGATACTGTTA i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1236952 476 - 2905041 TCTGCTATTTTTGACCTTGACCTTGCAAGTTTACTGCAGAAGAATTCACAAATTCCAGTGATAAACAAAAGAAGAAAAGAACCAGATGGCACCGGATAGCTGTGCTCTC-AAAGAAAAGGAGCTCTGCATACCCTGTCTCTTGCATTTCAGTTCCCTCCGACCTTCCCGGTGCCTGCTCTCCAACACAATGGAGTTTGTaccatataatttttttgatcaaaccaggatactttgaaaaatggaaaaaggattgttactctgggatgacaggcctcactcaggaatttcccaggcaaaTGTGGATGAATATCAAGTGCCAGTCATATTCTCTAATCAATTACTCATGCTTTGCTAAATCTGAGTCATGAAAACTTGCAGCATAAAGGAAGTGTCAG--------C-TTGGGAAAGCGTGGACTTCAGGAGGTGAGATCCATGAGGTTGGGAGTAGGTTACATTGCGAAGTCCTGTGGATACTGTTA i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1188960 483 - 2164891 TCTGCTATTTTTGACCTTGACCTTGCAAGTTTCCTGCAGAAGAATTCACAAATTCCAGTGATAAACAAAAGAAGAAAAGAACCAGATGGCACTGGATAGCTCTGCTCTC-AAA-AACAGGAGCTCTGCGAACCCTGTCTTTTGCACTTCAATTCCCTCCGACTTTCTCGGTGCGTGCTCTCCAACACAATGGAGTTTGTaccatataatttttttgatcaaaccaggatacgttcagaaatggaaaaaggattgttactctgggatgacaggcctcactcaggaatttcccaggtaaaTATGGGTGAATATCAAGTGCCAGTCATATTCTTTAATCAATTACTCATGCTTTGCTAAATCTGAGTAATGAAAACTTGCAGCATAAAAGAAGTGTCAGTGCTGAGCT-TGGAGAAAGTGTGGCCTTCAGGAGGTGAAATCCATGAGGTTGGCAGTAGGTTAAATTGTGAAGTCCTGTGGATACTGTTA i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1425838 465 - 1813869 TCTGCTATTTTTGACCTTGACCTTGCAAGTTTACTGCGGAAGAATTCACAAATTCCAGTGATAAACAAAAGAAGAAAAGAACCAGATGGCACCGGATAGCTGTTTTCTC-AAA-AAAAGGAGCTCTGCTAACCCTGTCTTTTGCACTTCAATTCCCTCCGACTTTCTCGGTGCGTGCTCTCCAACACAATGGAGTTTGTACCA---------TTTGATcaaaccaggatactttcaaaactggaaaaaggattgttactctgggatgacaggcctcactcaggaatttcccaggcaaaTGTGGGTGAAT---------CAGTCATATTCTCTAATCAATTACTCATGCTTTGCTAAATCTGAGTAATGAAAACTTGCACCATAAAAGAAGTGTCAGTACTCAGCT-TGGAGAAAGTGTGGACTTCAGGAGGTGAAATCCATGAGGTTGGGAGTAGGTTAAATTGTGAAGTCCTGAGGATACTGTTA i aotNan1.NW_018494782v1 C 0 C 0 e dasNov3.JH569188 483526 1638 + 760995 I e canFam3.chr1 56101533 9 + 122678785 I a score=265703.000000 s hg38.chr6_KB021644v2_alt 8857 27 + 185823 TATGAGCATATTAATCTTTTAAATGAT s panTro5.chr6 173463417 27 + 175400573 TATGAGCATATTAATCTTTTAAATGAT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171727262 27 + 173848474 TATGAGCATATTAATCTTTTAAATGAT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11411806 27 - 12463322 TATGAGCATATTAATCTTTTAAATGAT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156238428 27 + 157873769 TATGAGCATATTAATCTTTTAAATAAT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170264645 27 + 172585720 TATGAGCATATTAATCTTTTAAATAAT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169010254 27 - 170955103 TATGAGCATATTAATCTTTTAAATAAT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8297510 27 + 10161646 TATGAGCATATTAATCTTTTAAATAAT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1326939 27 + 3144229 TATGAGCATATTAATCTTTTAAAGAAT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96606381 27 + 98384682 TATGAGCATATTAATCTTTTAAATGAT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8149074 27 - 10857215 TATGAACATATTAATCTTTTAAATAAT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15544828 27 - 23502949 TATGAGCATATTAATCTTTTAAATGAT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169812213 27 + 171630274 TATGAGCATATTAATCCTTTAGGTAAT i calJac3.chr4 C 0 I 350 s saiBol1.JH378287 1237428 27 - 2905041 TAGGAGCATATTAATCCTTTAGGTAAT i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1189443 27 - 2164891 TATGAACATGTTAATCCTTTAGGTAAT i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1426303 27 - 1813869 TATGAGCATATTAATCCTTTAGGTAAT i aotNan1.NW_018494782v1 C 0 C 0 s canFam3.chr1 56101542 23 + 122678785 TATGATCGTATTCACATTGTGGG---- i canFam3.chr1 I 9 C 0 e dasNov3.JH569188 483526 1638 + 760995 I a score=5445410.000000 s hg38.chr6_KB021644v2_alt 8884 611 + 185823 TAATTTATTGATAATCTGATAGATAATTtgcatgatcttatttggatcttctgcttaggcattattatactggtcgtgtaagcaaggaaac--atccagaaaggtggggtaccttccctgagatcacagcgc-tagtgctggtggagaaaccggatggaagccaggtcgctctgatcccagctgtagtcatcccccgtgctgctacatactgGTCTGCAGGTGTGTGATTTATTTTATTAGAAGCAGAGAGCCATTCAAGTTATTAAATCTGGTGATCACGCTGACACTTCTGTCTTGAAAGAATAATTCTGGTTAAGAAGTAAAAGATGGACTGATGGGAGAGGACCTAGAGGCAGGGAAACAAGCTGCTGAATTATCACACTAAGAGTCTGAAATGGAGCAGGTGCAGTAGAAATAGAACGG-CACGATGTGTAGAGGACGGAAAGGCAGAAGGAAGCAGAGGGAAGAGACAGAGCTTCTCAGTGTAAT---TGGCTGTGTATGTGGTAATA-----ACAGAACAGTAGAAAGAAATAGACA----------------------------------A-------------AGT--------------------------------------------------------GAGGTGAGCTCTAAGCTAGATACACATTCATCATGTTCATACTGGCAATGGTCCGAGCTACGGTGCAGAGG-AGTC-- s panTro5.chr6 173463444 611 + 175400573 TAATTTATTGATAATCTGATAGATAATTTGCATGATCTTATTGGGATCTTCTGCTtaggcattattatactggtcgtgtaagcaaggaaac--atccagaaaggtggggtaccttccccgagatcacagcgc-tagtgctggtggagaaaccggatggaagccaggtctctctgatcccaGCTGTAGTCATCCCCCGTGCTGCTACGTACTGGTCTGCAGGTGTGTGATTTATTTTATTAGAAGCAGAGAGCCATTCAAGTTATCAAATCTGGTGATCACGCTGACACTTCTGTCTTGAAAGAATAATTCTGGTTAAAAAGTAAAAGATGGACTGATGGGAGAAGACCTAGAGGCAGGGAAACAAGCTGCTGAATTATCACACTAAGAGTCTGAAATGGAGCAGGTGCAGTAGAAATAGAATGG-CACGATGTGTAGAGGACGGAAAGGCAGAAGGAAGCAGAGGGAAGAGACAGAGCTTCTCAGTGTAAT---TGGCTGTGTATGTGGTAATA-----ACAGAACAGTAGAAAGAAATAGACA----------------------------------A-------------AGT--------------------------------------------------------GAGGTGAGCTCTAAGCTAGATACACATTCATCATGTTCATACTGGCAATGGTCCGAGCTACGGTGCAGAGG-AGAC-- i panTro5.chr6 C 0 C 0 s panPan2.chr6 171727289 611 + 173848474 TAATTTATTGATAATCTGATAGATAATTTGCATGATCTTATTGGGATCTTCTGCTtaggcattattatactggtcgtgtaagcaaggaaac--atccagaaaggtggggtaccttccccgagatcacagcgc-tagtgctggtggagaaaccggatggaagccaggtctctctgatcccaGCTGTAGTCATCCCCCGTGCTGCTACGTACTGGTCTGCAGGTGTGTGATTTATTTTATTAGAAGCAGAGAGCCATTCAAGTTATCAAATCTGGTGATCACGCTGACACTTCTGTCTTGAAAGAATAATTCTGGTTAAGAAGTAAAAGATGGACTGATGGGAGAGGACCTAGAGGCAGGGAAACAAGCTGCTGAATTATCACACTAAGAGTCTGAAATGGAGCAGGCGCAGTAGAAATAGAACGG-CACGATGTGTAGAGGACGGAAAGGCAGAAGGAAGCAGAGGGAAGAGACAGAGCTTCTCAGTGTAAT---TGGCTGTGTATGTGGTAATA-----ACAGAACAGTAGAAAGAAATAGACA----------------------------------A-------------AGT--------------------------------------------------------GAGGTGAGCTCTAAGCTAGATACACATTCATCATGTTCATACTGGCAATGGTCCGAGCTACGGTGCAGAGG-AGAC-- i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11411833 611 - 12463322 TAATTTATTGATAATCTGATAGATAATTtgcatgatcttatttggatcttctgcttaggcattattatactggtcgtgtaagcaaggaaac--atccagaaaggtggggtaccttccccgagatcacagcgc-tagtgccggtggagaaaccggatggaagccaggtctctctgatcctaGCTGTAGTCATCCGCCGTGCTGCTACGTACTGGTCTGCAGGTGTGTGATTTATTTTACTAGAAGCAGAGAGCCATTCAAGTTATCAAATCTGGTGATCACGCTGACACTTCTGTCTTGAAAGAATAATTCTGGTTAAGAAGTAAAAGATGGACTGATGGGAGATTACCTAGAGGCAGGGAAACAAGCTGCTGAATTATCACACTAAGAGTCTGAAATGGAGCAGGTGCAGTAGAAATAGAACGG-CACGATGTGTAGAGGACGGAAAGGCAGAAGGAAGCAGAGGGAAGAGACAGAGCTTCTCAGTGTAAT---TGGCTGTGTATGTGGTAATA-----ACAGAACAGTAGAAAGAAATAGACA----------------------------------A-------------AGT--------------------------------------------------------GAGGTGAGCTCTAAGCTAGATACACATTAATCATGTTCATACTGGCAATAGTCCGAGCTACGGTGCAGAGG-AGAC-- i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156238455 610 + 157873769 TAATTTATTGATGATCTGATAGATAATTTGCATGACCTTATTTGGATCTTCTGCTtaggaattattatactggttgtgtaagcaaggaaac--attcagaaaggtggggtaccttccccgagatcacagcac-tagtgctggtggagaaacgggatggaagccaggtctctctgatcccaGCTGTAGTCATCCCCCGTGCTGTTACGTACTGGTCTGCAGGTGTGTGATTTATTTTATTAGAAGCCGGGAGCCATTCAAGTTATCAAATCTGGTGATCACGCTGACACTTCTGTCTTGAAAGAATAATTCTGGTTAACAAG-AAAAGATGGAGTGAAGGGAGAGGACCTAGAGGCAGGGAAACAAGCTGCTGAATTATCACACTAAGAGTCTGAAATGGAGCAGGTGCAGTAGAAATAGAACGG-CATGATGTGTAGAGAACGGAAAGGCAGAAGGAAGCAGAGGGAAGAGACAGAGCTTCTCAGTGTAAT---TGGCTGTGTATTTGGTAATA-----ATAGAACAGTAGAAAGAAATAGACA----------------------------------A-------------AGT--------------------------------------------------------GAGGTGAGCTCTAAGCTAGATACACATTAATCATGTTCACACTGGCAATAGTCCGAGCTACGGTGCAGAGG-AGAC-- i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170264672 692 + 172585720 TAATTTACTGATAATCTGATAGATAATTtgcatgatcttatttggatcttctgcttaggcattattatactggtcgtgtaagcaaggaaac--attcagaaaggtggggtatcttccctgagatcacagcgc-tagtgctggtggagaaacgggacggaagccaggtctctctgatcccaGCTGTAGTCATCCCCCGTGCTGTTACATAGTGGTCTGCAGGTGTGTAATTTATTTTATTAGAAGCAGGGAGCCTTTCAAGTTATCAAATCTGGTGATCACGCTGACACTTCTGTCTTGAAAGAATAATTCTGGCTAACAAGTAAAAGATGGACTAATGGGAGAGGACCTAGAGGCAGGAAAACAAGCTGCTGAATTATCACACTGAGAGTTTGAAATGGAGCAGGTGCAGTAGAAATAGAACAG-CAAGATGTGTAGAGGACGGAAAGGCAGAAGGAAGCAGAGGGAAGAAACAGAGCTTCTCAGTGTAAT---TGGCTGTGTATGTGGTAATA-----ATAGAACAGTAGAAAGAAATAGACAGTAAAAAGAAATAGA-------------------ACagaagtaga---agtagtagaaagaaatagaagtagtagAAAGAAATAGAACAGTAGAAAGAAATAGGAGTGAGGTGAGCTCTAAATTAGATACACATTAATCATGTTCATACTGGCAGGAGTCTGAGCTACGGTGCAGACG-AGAC-- i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169010281 692 - 170955103 TAATTTACTGATAATCTGATAGATAATTTGCATGATCTTATTTGGATCTTCTGCTTaggcattattatactggtcgtgtaagcaaggaaac--attcagaaaggtggggtatcttccctgagatcacagcgc-tagtgctggtggagaaacgggacggaagccaggtctctctgatcccaGCTGTAGTCATCCCCCGTGCTGTTACATAGTGGTCTGCAGGTGTGTAATTTATTTTATTAGAAGCAGGGAGCCTTTCAAGTTATCAAATCTGGTGATCACGCTGACACTTCTGTCTTGAAAGAATAATTCTGGCTAACAAGTAAAAGATGGACTAATGGGAGAGGACCTAGAGGCAGGAAAACAAGCTGCTGAATTATCACACTGAGAGTTTGAAATGGAGCAGGTGCAGTAGAAATAGAACAG-CAAGATGTGTAGAGGACGGAAAGGCAGAAGGAAGCAGAGGGAAGAAACAGAGCTTCTCAGTGTAAT---TGGCTGTGTATGTGGTAATA-----ATAGAACAGTAGAAAGAAATAGACAGTAGAAAGAAATAGA-------------------ACAGAAGTAGA---AGTAGTAGAAAGAAATAGAAGTAGTAGAAAGAAATAGAACAGTAGAAAGAAATAGAAGTGAGGTGAGCTCTAAATTAGATACACATTAATCATGTTCATACTGGCAGGAGTCTGAGCTACGGTGCAGACG-AGAC-- i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8297537 692 + 10161646 TAATTTACTGATAATCTGATAGATAATTtgcatgatcttatttggatcttctgcttaggcattattatactggtcgtgtaagcaaggaaac--attcagaaaggtggggtatcttccctgagatcacagcgc-tagtgctggtggagaaacgggacggaagccaggtctctctgatcccaGCTGTAGTCATCCCCCGTGCTGTTACATAGTGGTCTGCAGGTGTGTAATTTATTTTATTAGAAGCAGGGAGCCTTTCAAGTTATCAAATCTGGTGATCACGCTGACACTTCTGTCTTGAAAGAATAATTCTGGCTAGCAAGTAAAAGATGGACTAATGGGAGAGGACCTAGAGGCAGGAAAACAAGCTGCTGAATTATCACACTGAGAGTTTGAAATGGAGCAGGTGCAGTAGAAATAGAACAG-CAAGATGTGTAGAGGACGGAAAGGCAGAAGGAAGCAGAGGGAAGAAACAGAGCTTCTCAGTGTAAT---TGGCTGTGTATGTGGTAATA-----ATAGAACAGTAGAAAGAAATAGACAGTAGAAAGAAATAGA-------------------ACAGAAATAGA---AGTAGTAGAAAGAAATAGAAGTAGTAGAAAGAAATAGAACAGTAGAAAGAAATAGAAGTGAGGTGAGCTCTAAATTAGATACACATTAATCATGTTCATACTGGCAGGAGTCTGAGCTACGGTGCAGATG-AGAC-- i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1326966 692 + 3144229 TAATTTTTTGATAATCTGATAGATAATTtgcatgatcttatttggatcttctgcttaggcattattatactggtcgtgtaagcaaggaaac--attcagaaaggtggggtatcttccctgagatcacagcgc-tagtgctggtggagaaacgggacggaagccaggtctctctgatcccaGCTGTAGTCATCCCCCATGCTGTTACATAGTGGTCTGCAGGTATGTGATTTATTTTATTAGAAGCAGGGAGCCTTTCAAGTTATCAAATCTGGTGATCACGCTGACACTTCTGTCTTGAAAGAATAATTCTAGTTAACAAGTAAAAGATGGACTAATGGGAGAGGACCTAGAGGCAGGAAAACAAGCTGCTGAATTATCACACTGAGAGTTTGAAATGGAGCAGGTGCAGTAGAAATAGAACGG-CACGATGTGTAGAGGACAGAAAGGCAGAAGGAAGCAGAGGGAAGAAGCAGAGTTTCTCAGTGTAAT---TGGCTGTGTATGTGATAATC-----ATAGAACAGTAGAAAGAAATAGACAGTAGAAAGAAATAGA-------------------ACAGAAATAGA---AGTAGTAGAAAGAAATAGAAGTAGTAGAAAGAAATAGAACAGTAGAAAGAAATAGAAGTGAGGTGAGCTCTAAATTAGATACACATTAATCATGTTCATACTGGCAGGAGTCCGAGCTATGGTGCAGACG-AGAC-- i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96606408 656 + 98384682 TAAATTATTGATAATCTGATAGATAATTTGCATGATCTTATTTGGATTTTCTGCTTaggcgttattatactggtcgtgtaagcaaggaaac--attcagaaaggtggggtaccttccctgagatcacagcgc-tagtgctggtggagaaacgggacggaagccaggtctctctgatcccaGCTGTAGTCATCCCGCATGCTGTTACATAGTGGTCTGCAGGTGTGTGATTTATTTTATTAGAAGCAGGGAGCCTTTCAAGTTATCACATCTGGTGATCACCCTGACACTTCTGTCTTGAAAGAATAATTCCGGTTAACAAGTAAAAGATGGACTAATGGGAGAGGACCTAGAGGCAGGAAAACAGGCTGCTGAATTATCACACTGAGAGTTTGAAATGGAGCAGGTGCAGTAGAAATAGAACGG-CATGATGTGTAGAGGACGGAAAGGCAGAAGGAAGCAGAGGGAAGAAACAGAGCTTCTCAGTGTAAT---TGGCCGTGTATGTGGTAATA-----ATAGAACAGTAGAAAGAAATAGA------------------------------------ACAGAAATAGAAGTAGT----------------------AGAAAGAAATAGAACAGTAGAAAGAAATAGAAGTGAGGTGAGCTCTAAATTAGATACACATTAATCATGTTCATACTGGCAGGAGTCCGAGCTACGGTGCAGACG-AGAC-- i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8149101 692 - 10857215 TAATTTTTTGATAATCTGATAGATAATTtgcatgatcttatttggatcttctgcttaggcattattatactggtcgtgtaagcaaggaaac--attcagaaaggtggggtatcttccctgagatcacagcgc-tagtgctggtggagaaacaggacggaagccaggtctctctgatcccaGCTGTAGTCATCCCCCATGCTGTTACATAGTGGTCTGCAGGTATGTGATTTATTTTATTAGAAGCAGGGAGCCTTTCAAGTTATCAAATCTGGTGATCACACTGACACTTCTGTCTTGAAAGAATAATTCTAGTTAACAAGTAAAAGATGGACTAATGGGAGAGGACCTAGAGGCAGGAAAACAAGCTGCTGAATTATCACACTGAGAGTTTGAAATGGAGCAGGTGCAGTAGAAATAGAACGG-CACGATGTGTAGAGGACAGAAAGGCAGAAGGAAGCAGAGGGAAGAAGCAGAGTTTCTCAGTGTAAT---TGGCTGTGTATGTGATAATC-----ATAGAACAGTAGAAAGAAATAGACAGTAGAAAGAAATAGAACAGAAATAGAAGTAGTAGAAAGAAATAGAAGTAGT----------------------AGAAAGAAATAGAACAGTAGAAAGAAACAGAAGTGAGGTGAGCTCTAAATTAGATACACATTAATCATGTTCATACTGGCAGGAGTCCGAGCTATGGTGCAGACG-AGAC-- i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15544855 606 - 23502949 TAATTTATTGATAATCTGATAGATAGTTtgcatgatcttatttggatcttctgcttaggcattattatactggttgtgtaagcaaggaaac--attcagaaaggtggggtaccttccctgagattacagcgc-tagtgctggtggagaaacgggacagaagccaggtctctctgatcccaGCTGTAGTCATCCCCCGTGCTGTTACATAGTGGTCTGCAGGTGTGTGGTTTATTTTATTACAAGCAGGGAGCCTTTCAAGTTATCAGATCTGGTGATCACGCTGACACTTCTGTCTTGAAAGAATAATTCTGGTTAACAAGTAAAAGATGGACTCATGGGAGAGGACCTAGAGGCAGGAAAACAAGCTGCTGAATTATCACACTAAGAGTCTGAAATGGAGCAGGTGCAGTAGAAATAGAATGA-CATGATGTGTAGAGGACGGAAAGGCAGAAGGAAGCAGAGGGAAGAAACAGAGCTTCTCAGTGTCAT---TGGCTGTGTATGTGGTAATA-----ATAGAACAGTAGAAAGAAATAGACA----------------------------------A-------------AGT-------------------------------------------------------------GAGCTCAAAGCTAGATACACATGAATCATGTTCATACTGGCAGGAGTCCAAGCTACAGTGCAGAGG-AGAC-- i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169812590 588 + 171630274 TAATTTATTGATAATCTGATAGATGATTtgcatgatcttatttggaccttctgcttaggcattagtat-tctgtcctgtaag-aaggaaac--attcagaaagctggagtgacttctccaatctcccagcgctaagtgc---tggagaaacgggatggaagccaggtttctctgaACC-AGCAGTCATCACCCT-----------CAGGCTGGTCTGCAGGTGTGTGAC--ATTTTATTAGGAGTAGGGGGCCATTCAAGCTATCAGACCTGgtgattatgctgagacctctgtcttggaagaataattctggctaacaagttaaaaatggactgat-ggagaggacccagaagcagagaaacaagGGGCTGAATTATCACGTGGAGAACTGGAAATGGAGCAGGTGCAGTAGAAACAGAACAG-CAGGATGTGTAGAGGACCGAAGGGCAGAATGAAGCAGAGGGAAGAGCCAGAGCTGCTCAGTGCAAT-------TGCGTGTGTGGTAACG-----ATAGAACAGTAGAAAGGAATACACA----------------------------------G-------------AGC--------------------------------------------------------GAGGAGAGCTCTAAGCTGGATATACATGAACTGTGTTCATACTGGCGACAGCCCAGGCCAC-GTGCGGATGGAGAC-- i calJac3.chr4 I 350 C 0 s saiBol1.JH378287 1237455 590 - 2905041 TGATTTCTTGATAATCTGATAGATGATTTGCATGATCTTATTTGGGTCTTCTGCTTAGGCATTAGTAT-TCGGTCCTGTAAG-AAGCAAAC--ATTCAGAAAGGTGGGGTAACCTCCCCAAGCTCCCAGCGC-GAGTGCTGGTGGAGAAACAGGACGGAAGCCA-GTTTCTCTGATCC-AGCCGTCATCACCCC-----------CATGCTGGTCTGCAGGCGTATGACTGATTTTATTAGGAGTAAGGAGCCATTCAAGCTATCAGACCTGGTGATCCTGCTGAGACCTCTGTCTTGGAAGAATAATTCTGGCTAACAAGTTAAAGATGGACTGTT-GGAGAGGACCCAGAAGGAGGAAAACGAGGGGCTGAAT--TTGCGTGGAGAATTGGAAATGGAGCAGGTGCAGTAGAAACAGAACAG-CAGGATGTATAGAGGACTGAAGGGCAGAATGAAGCAGAGGGAAGAGCCGGAGCTTCTCAGTGCAAT-------TGCGTGTGTGCTAATA-----ATAGAGCAACAGAAAGGAATAGACC----------------------------------A-------------AGT--------------------------------------------------------GAGGCGAGATCTAAGCCGGATATACATGCGTTGCGTTCATACTGGCGGTAGTCTGCGCTACAGTGCAGATGGAGAC-- i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1189470 587 - 2164891 TAATTTATTGATAATCTGATAGATAATTTGCCTGATCTTATTTGGATCTTCTGCTTAGGCATTAGTAT-TTGGTCCTGTAAG-Aaggaaac--actcagaaatgtggggtaacttctccaagctcccagcgc-tcgtgctggtggagaaacgggatggaagccaggtttctctgacGC-AGCCGTCGTCACCCC-----------CATGCTGGTCTGCAGGTGTATGACTTATTGCATTAGGAGTAGGGAGCCATTCAGGCTGGCAGACCTGGTGATCATGCTGAGACCTCTGTCTTGGAAGAATAATTCTGGCTAACAAATTAAAGACGGACTGAT-GGAGAGGACCCAGAAGCAGGAAAACAAGGGGCTGAATTATCG-GCAGAGAATTGGAAATGGAGCAGGTGCAGTAGAAAC-GAACAG-CACGTTGTGTAGAGGACTGAAGGGCAGAATGAAGCGGCAGGAAGAGCCAGAGCTTCTCAGTGCAA--------TGCGTGTGTGGTAATA-----ATAGAAC---AGAAAGGAACAGACA----------------------------------A-------------AGT--------------------------------------------------------GAGGCGAGCTCTAAGCCGGATATACATGAATTGCGTTCATACTGGCGATAGTCCGAGCCACATTGCAGACGGAGAC-- i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1426330 546 - 1813869 TAATTTATTGATAATCTGATAGATAATTTGCATGATCTTATTTGGATCTTCTGCTTAGGCATTAGTAT-TCGGTCCTGTAAG-AAGGAAAC--ATTCAGAAAGGTGG---------------------------------------------GGATGGAAGCCAGGTTTCTCTGATCC-AGCCGTCATCACCCC-----------CATGCTGGACCGCAGGTGTATGACTTATTTTATTAGGAGTAGGGAGCCAGTCAAGCTATCAGACCTGgtgatcatgctgagacctctgtcttggaagaataattttggctaacaagttaaagatggactgat-ggagaggacccagaagcaggaacacaagGGGCTGAATTATCGCGCGGAGAACTGGAAATGGAGCAGGTGCAGTAGAAAGAGAACAG-CAGGATGTGTAGAGGACTGAAGGGCAGAATGACGCAGAGGGAAGAGCCAGAGCTT---AGTGCAAT-------TGCGTGTGTGGTAATG-----ATAGAACAATAGAAAGGAATAGACC----------------------------------A-------------AGT--------------------------------------------------------GAGGCGAGCTCTAAGCTGGATATATGTGAATTGTGTTCATACTGGCGATAGTCGGAGCTACGGTGCAGATGCAGAC-- i aotNan1.NW_018494782v1 C 0 C 0 s canFam3.chr1 56101565 536 + 122678785 TAATTTAGCAATTACCTGCTAGACCCTTGGCATCATTT--TTTGGATCTTCTAC-------TCCTTATACCAGTTGCCTAAAGAATGAAGCAGACTCGGAAAGGGAAGATAACT---CAGGGAGCCTGGTGG-GGGAACCCATGCAGGGAGAGGGTTGATGCCAGGCATGT-GGGTGCAAGTCGCAGT--GTCCCCGGGCTG---GGGGCTGGGCTGCA----------------------------------------------------TGTGGTAATGCAAGGACCTCAGGCTTGGCAGAGTCACTCTGGTTAAAGAGCAAATGATGCTCTGGAGGGAGAGA--TGGGAGGCAGGGGGACGAGCTGCCCTGTTATCAGACTGAGAATCTGAAATAAAACAGCTGTCAGAAAAATAGAGCAGATGGGATTTGT---TGGCAAAGTGGCCAAAGGAGGCAGAGGGAGGAGACAGAGCTTCCTGACCTGATGATGGATCATGTATGTGGAAACAGAGAGACAGGAAAGCAGAGGGAGATGGAGA----------------------------------C-------------AGT--------------------------------------------------------GAGGTGGGCTCTGAGC-GGTGGCACAGTAATCAC----------AAGATGGTCCAAGTGTGGGCATAGA---AGGCTT i canFam3.chr1 C 0 I 29 e dasNov3.JH569188 483526 1638 + 760995 I a score=169919.000000 s hg38.chr6_KB021644v2_alt 9495 23 + 185823 ACTGTGCCCGTCCAGTGCACTGC s panTro5.chr6 173464055 23 + 175400573 ACTGTGCCCGTCCAGTGCACTGC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171727900 23 + 173848474 ACTGTGCCCGTCCAGTGCACTGC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11412444 23 - 12463322 ACTGTGCCTGTCCAGTGGACTGC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156239065 23 + 157873769 ACTGTGCCCGTCCAGTGCACTGT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170265364 23 + 172585720 ACTGTGCCCGTCCAGTGCACTGT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169010973 23 - 170955103 ACTGTGCCCGTCCAGTGCACTGC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8298229 23 + 10161646 ACTGTGCCCGTCCAGTGCACTGC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1327658 23 + 3144229 ACTGTGCCCGTCCAGTGCACTGC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96607064 23 + 98384682 ACTGTGCCCGTCCAGTGCACTGC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8149793 23 - 10857215 ACTGTGCCCGTCCAGTGCACTGC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15545461 23 - 23502949 ACTGTGCCCATCCAGTGCACTGC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169813178 23 + 171630274 CCTGCACCGGAACGGTGCGCTTC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1238045 23 - 2905041 GCTGTGCCAGTACAGTGCGTGGC i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1190057 5 - 2164891 GCTA------------------C i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1426876 23 - 1813869 GCTGCGCCAGTACAGTGCGCTGC i aotNan1.NW_018494782v1 C 0 C 0 e dasNov3.JH569188 483526 1638 + 760995 I e canFam3.chr1 56102101 29 + 122678785 I a score=740335.000000 s hg38.chr6_KB021644v2_alt 9518 86 + 185823 ACCATTATTTACGGGTAAA----------------TAGAAAAGTCTTAGTTTATTTAATGTTTA-AATATTTCCTTTTGTTCATTGGATTATTTGACATTATT s panTro5.chr6 173464078 86 + 175400573 ACCATTATTTACGGGTAAA----------------TAGAAAAGTCTTAGTTTATTTAATGTTTA-AATATTTCCTTTTGTTCATTGGATTATTTGACATTATT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171727923 86 + 173848474 ACCATTATTTACGGGTAAA----------------TAGAAAAGTCTTAGTTTATTTAATGTTTA-AATATTTCCTTTTGTTCATTGGATTATTTGACATTATT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11412467 86 - 12463322 ACCATTATTTACGGGTAAA----------------TAAAAAAGTCTTAGTTTATTTAATGTTTA-AACATTTCCTTTTGTTCATTGGATTATTTGACATTATT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156239088 86 + 157873769 ACCATTATTTACAGGTAAA----------------TAGGAAAGTCTTAGTTTATTTAATATTTA-AATATTTCCTTTTGTTCATTGGATTATTTGACATTATT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170265387 86 + 172585720 ACCGTTATTTACAGGTAAC----------------TAGAAAAGTCTTAGTTTATTTAATGTTTA-AATATTTCCTTTTGTTCATTGGATTATTTGACATTATT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169010996 86 - 170955103 ACCGTTATTTACAGGTAAC----------------TAGAAAAGTCTTAGTTTATTTAATGTTTA-AATATTTCCTTTTGTTCATTGGATTATTTGACATTATT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8298252 86 + 10161646 ACCGTTATTTACAGGTAAC----------------TAGAAAAGTCTTAGTTTATTTAATGTTTA-AATATTTCCTTTTGTTCACTGGATTATTTGACATTATT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1327681 86 + 3144229 ACCATTATTTACAGGTAAC----------------TAGAAAAGTCTTAGTTTATTTAATGTTTA-AATATTTCCTTTTGTTCATTGGATTATTTGACATTATT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96607087 86 + 98384682 ACCGTTATTTACAGGTAAC----------------TAGAAAAGTCTTAGTTTATTTAATGTTTA-AATATTTCCTTTTGTTCATTGGATTATTTGACATTATT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8149816 86 - 10857215 ACCATTATTTACAGGTAAC----------------TAGAAAAGTCTTAGTTTATTTAATGTTTA-AATATTTCCTTTTGTTCATTGGATTATTTGACATTATT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15545484 86 - 23502949 ACCATTATTTACAGGTAAA----------------TAGAAAAGTCTCAGTTTATTTAATGTTTA-AATATTTCCTTTTGTTCATTGGATGATTTGACATGATT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169813201 76 + 171630274 ACCACTATTTACAGGTAAA----------------TCTAAGAGTCTTAGTGT-TTTAGTGTTTA-GATATTTCCGTTTGTTCA---------TTGACATTATT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1238068 75 - 2905041 ACCGCTATTTACAGGGAAA----------------TCTAAGAATCTTAGTGTATTTCGTGTTTA-AATATTTCC--TTTTTTA---------TTGACATTTTT i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1190062 77 - 2164891 ACCGTTATTTACAGGAAAA----------------CCTAAGCGTCTTCATGTATTTCATGTTTA-AATATTTCCTTTTGTTCA---------TTGACATCATT i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1426899 77 - 1813869 ACCGTTACTCACGGGTAAA----------------TCGAAGAGTCTTAGTGTATTTAGTGTTTA-AATATTTCCTTTTGTTCA---------TTGACATTATT i aotNan1.NW_018494782v1 C 0 C 0 s canFam3.chr1 56102130 102 + 122678785 ACCAAGTCTTACTGGTAGATTTTGAGTATCATCCTTAGGGTAGAGTCAGTGAAAACATTTCTTATAATACCCCCTTCTCATCATGGGAT-ATTTGAAGATATT i canFam3.chr1 I 29 I 197 e dasNov3.JH569188 483526 1638 + 760995 I a score=1681564.000000 s hg38.chr6_KB021644v2_alt 9604 175 + 185823 CTTTTTGACATCTTGATGTGTTAGTAACTTTACATTATATATTAGGGTCATTTGCAATAGCTTAATGGAGAATCAAGTGTTTCTCACATTTTTGGaaccttattaagatata---------ccacaaaatgcaccatttgaggtggtcag-ttcagggatattttagttcattcacagacttaca s panTro5.chr6 173464164 175 + 175400573 CTTTTTGACATCTTGATGTGTTAGTAACTTTACATTATATATTAGGGTCATTTGCAATAGCTTAATGGAGAATCAAGTGTTTCTCACATTTTTGGaaccttattaagatata---------ccacaaaatgcaccatttgaggtggtcag-ttcagggatattttagttcattcacagacttaca i panTro5.chr6 C 0 C 0 s panPan2.chr6 171728009 175 + 173848474 CTTTTTGACATCTTGATGTGTTAGTAACTTTACATTATATATTAGGGTCATTTGCAATAGCTTAATGGAGAATCAAGTGTTTCTCACATTTTTGGaaccttattaagatata---------ccacaaaatgcaccatttgaggtggtcag-ttcagggatattttagttcattcacagacttaca i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11412553 175 - 12463322 CTTTTTGACATCTTGATGTGTTAGTAACTTTACATTATATATTAGGGTCATTTGCAATAGCTTAATGGAGAATCAAGTGTTTCTCACATTTTTGGaaccttattaagatata---------ccacaaaatgcaccatttgaggtggtcag-ttcagggatattttagttcattcacagacttacg i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156239174 175 + 157873769 CTTTTTGACATCTTGATGTGTTAGTAACTTTACATTATATATTAGGGTCATTTGCAATAGCTTAATGGAGAATCGAGTGTTTCTCACATTTTTGGaaccttattaagatata---------ccataaaatgcaccatttcagatggtcag-ttcagggatattttagttcattcacagacttaca i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170265473 176 + 172585720 CTTTTTGACATCTTGATGTGTTAGTAACCTGACATTGTATATTAGGATCATTTGCAATAGCTTAATGGAGAATCAAGTGTTTCTCACATTTTTGGAACCTTGTTAAGatata---------ccataaagtgcaccatttcaggtggtcagtttcagggatgttttagttcattcacagatttaca i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169011082 176 - 170955103 CTTTTTGACATCTTGATGTGTTAGTAACCTGACATTGTATATTAGGATCATTTGCAATAGCTTAATGGAGAATCAAGTGTTTCTCACATTTTTGGaactttgttaagatata---------ccataaagtgcaccatttcaggtggtcagtttcagggatgttttagttcattcacagatttaca i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8298338 176 + 10161646 CTTTTTGACATCTTGATGTGTTAGTAACCTGACATTGTATATTAGGATCATTTGCAATAGCTTAATGGAGAATCAAGTGTTTCTCACATTTTTGGAACCTTGTTAAGatata---------ccataaagtgcaccatttcaggtggtcagtttcagggatgttttagttcattcacagatttaca i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1327767 176 + 3144229 CTTTTTGACATCTTGATGTGTTAGTAACCTGACATTGTATATTAGGATCATTTGCAATAACTTAATGGAGAATCAAGTGTTTCTCACATTTTTGGAACCTCGTTAAGATATA---------TCATAAAATGCACCATTTCAGGTGGTCAGTTTCAGGGATGTTTTAGTTCGTTCACAGACTTaca i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96607173 176 + 98384682 CTTTTTGATATCTTGATGTGTTAGTAACTTGACATTATATATTAGGGTCATTTGCAATAGCTTAATGGAGAATCAAGTGTTTCTCACATTTTTGGAACCTTGTTAAGatata---------ccataaaatgcaccatttcaggtggtcagtttcagggatgttttagttcattcacagacttaca i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8149902 176 - 10857215 CTTTTTGACATCTTGATGTGTTAGTAACCTGACATTGTATATTAGGATCATTTGCAATAACTTAATGGAGAATCAAGTGTTTCTCACATTTTTGGAACCTCATTAAGatata---------ccataaagtgcaccatttcaggtggtcagtttcagggatgttttagttcgttcacagacttaca i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15545570 176 - 23502949 CTTTTTGACATCTTGATGTGTTAGTAACTTGACATTATATATTAGGGTCATTTGCAATAGCTTAATGGAGAATCAAGTGTTTCTCACATTTTCGGAACCTTGTTAAGatata---------ccataaaatgcaccatttcaggtggtcagtttcagggatgttttagttcattcacagacttaca i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169813277 183 + 171630274 CCTTCTGACATCTTGATGTTTCAGTAACTTTACATTATATATTAGGGCCATTTGCAATAGCTTAATGGAGAATCAAGTGTTTCTCACAtttttcaaagcttattaagataca-tttacacaccataaaactcaccatttcaagtgctcag-ttcaggggtgttctagttcattcacaggcgtata i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1238143 184 - 2905041 CTTTCTGACATCTTGATGTATCACTAACTTTACATTATATATTAGGGTCATTTGCAATAGCTTAATGGAGAATCAAGTGTTTCTCACATTTTTCAAAGCttattaagatatattttacacaccataaaattcatcatttcaagtgctcag-ttcaggggtgttttacttcattcacaggcgtaca i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1190139 184 - 2164891 CTTTCCAACATCTTGATGTATCAGTAACTTTACATTATATATTAGGGTCATTTGCAATAGCTTAATGGAGAATCAAGTGTTTCTCACAtttttcaaagcttattaagatatattttacacaccataaaattcaccatttcaagtgctcag-ttcagggatgttttagttcattcatgggcgtaca i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1426976 183 - 1813869 CGTTCTGACATCTTGATGTATCAGTAACTTTACATTATATATTAGGGTCATTTGCAATACCTTAATGGAGAATCAAGTG-TTCTCACATTTTTCAAAGCttattaagatatattttacacaccataaaattcaccatttcaagtgctcag-ttcagggatgttttcgttcattcacaggcgtaca i aotNan1.NW_018494782v1 C 0 C 0 e dasNov3.JH569188 483526 1638 + 760995 I e canFam3.chr1 56102232 197 + 122678785 I a score=1366774.000000 s hg38.chr6_KB021644v2_alt 9779 150 + 185823 ctttcagcaccccagta-------agaagcctcacacccattag----------ggtcc-----acca--tggctgctctccccaccgacttcaggcctggcagcca--atgatctgctccatgtctctctggattcgtcttctctgagcattccacacacatagccctgcagtgt s panTro5.chr6 173464339 150 + 175400573 ctttcagcaccccagta-------agaagcctcacacccattag----------ggtcc-----acca--tggctgcactccccaccgacttcaggcctggcagcca--atgatctgctccatgtctctctggattcgtcttctctgagcattccacacacatagccctgcagtgt i panTro5.chr6 C 0 C 0 s panPan2.chr6 171728184 150 + 173848474 ctttcagcaccccagta-------agaagcctcacacccattag----------ggtcc-----acca--tggctgctctccccaccgacttcaggcctggcagcca--atgatctgctccatgtctctctggattcgtcttctctgagcattccacacacatagccctgcagtgt i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11412728 150 - 12463322 ctttcagcaccccagta-------agaagcctcatacccattag----------ggtcc-----acca--tggctgctctccccaccgacttcaggcctggcagcca--atgatctgctccatgtctctctggattcgtcttctctgagcattccacacacatagccctacagtgt i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156239349 150 + 157873769 ctttccgcaccccagta-------agaagcctcacacccattag----------ggtcc-----gcca--tggctgctccctccacccactccaggcctggcagcca--atgatctgttccatgtctctctggattcatcttctctgagcattccacacacacagccctgcagtgt i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170265649 148 + 172585720 ctttcagcaccccagta-------agaagcctcacgccccttag----------ggtct-----gcca--tggctgctctccccacccaccccaggcccagcagcca--atgatctgttccatgtctctctggattcgtcttctctgagcattccacacac--agccctgcagcgt i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169011258 148 - 170955103 ctttcagcaccccagta-------agaagcctcacgccccttag----------ggtct-----gcca--tggctgctctccccacccaccccaggcccagcagcca--atgatctgttccatgtctctctggattcgtcttctctgagcattccacacac--agccctgcagcgt i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8298514 148 + 10161646 ctttcagcaccccagta-------agaagcctcacgccccttag----------ggtct-----gcca--tggctgctctccccacccaccccaggcccagcagcca--atgatctgttccatgtctctctggattcgtcttctctgagcattccacacac--agccctgcagcgt i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1327943 148 + 3144229 ctttcagcaccccagta-------agaagcctcacgcccgttag----------ggtct-----gcca--tggctgctttccccacccaccccaggcccagcagcca--atgatctgttccatgtctctctggattcgtcttctctgagcattccacacac--agccctgcagcgt i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96607349 148 + 98384682 ctttcagcaccccagta-------agaagcctcacgcccattag----------ggtct-----gcca--tggctgctctccccacccaccccaggcccagcagcca--atgatctgttccctgtctctctggcttcgtcttctctgagcgttccacactc--agccatgcagtgt i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8150078 148 - 10857215 ctttcagcaccccagta-------agaagcctcacgcccattag----------ggtct-----gcca--tggctgctctccccacccaccccaggcccagcagcca--atgatctgttccatgtctctctggattcgtcttctctgagcattccacacac--agccctgcagcgt i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15545746 147 - 23502949 ctttcagcaccccagta-------agaagcctcacacccatta-----------ggtct-----gcca--tggctgctctccccacccaccccaggcccagcagcca--atgatctgttccatgtctctctgaattcgtcttctctaagcattccacacac--agccctgcagtgt i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169813460 145 + 171630274 ctttcagtgccccagta-------agaagccccatacccgttag----------ggtcc------cca--tggctgctcccctcacccactgcaggcctggcagcca--gcgatctgttccacgtgtgtctggattcgtcctctcctggcatttcatCCTC----TCCTGCAGTGT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1238327 149 - 2905041 ctttcagcaccccagta-------agaagcctcatacccgttag----------ggtcc------cca--aggctgttctcctcacccaccccaggcccggcagcca--gcgatctgttccatgtgtgtctggattcatcttctcctggcatttcatatgcagagccatgcagtgc i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1190323 149 - 2164891 ctttcagcaccccagta-------agaagccccataccccttag----------ggtcc------cca--tggctgctctcctcacccaccccaggcccggcagcca--gagatctgttccatgtgtgtctggattcgtcttctcctggcatttcatatacagagccatgcagtgt i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1427159 149 - 1813869 ctttcagcaccccagta-------agaagccccatacccgttag----------ggccc------cca--cggctgttctcctcacccaccctgggcccggcagcca--gcgatctgatccatgtgtgtctggattcgtcttcgcctggcgtttcacatacagagccatgcagtgt i aotNan1.NW_018494782v1 C 0 C 0 s canFam3.chr1 56102429 161 + 122678785 CCTTCAGCACCTCCGCATGTTAGTAGGACCATGTTGCCCATCGGTCACGGGAATGGTCTAAGGAGCCAACAGAGTGTTTTCCTCACATACTTCacaat-----gtcattatgatatatttcacattccaagaaattcacccatttcaaggatc----------agttcagtgggtt i canFam3.chr1 I 197 C 0 e dasNov3.JH569188 483526 1638 + 760995 I a score=51748.000000 s hg38.chr6_KB021644v2_alt 9929 8 + 185823 gagac--------ttt--------- s panTro5.chr6 173464489 8 + 175400573 gagac--------ttt--------- i panTro5.chr6 C 0 C 0 s panPan2.chr6 171728334 8 + 173848474 gagac--------ttt--------- i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11412878 8 - 12463322 gagac--------ttt--------- i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156239499 8 + 157873769 gagac--------ttt--------- i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170265797 8 + 172585720 gagac--------ttt--------- i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169011406 8 - 170955103 gagac--------ttt--------- i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8298662 8 + 10161646 gagac--------ttt--------- i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1328091 8 + 3144229 gagac--------ttt--------- i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96607497 9 + 98384682 gagact-------ttt--------- i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8150226 8 - 10857215 gagac--------ttt--------- i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15545893 16 - 23502949 gagactttttttattt--------- i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169813605 8 + 171630274 GAGAA--------TTT--------- i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1190472 8 - 2164891 gagac--------ttt--------- i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1427308 8 - 1813869 gagac--------ttt--------- i aotNan1.NW_018494782v1 C 0 C 0 s canFam3.chr1 56102590 17 + 122678785 tagat--------catccatgggtt i canFam3.chr1 C 0 C 0 e saiBol1.JH378287 1238476 0 - 2905041 C e dasNov3.JH569188 483526 1638 + 760995 I a score=314027.000000 s hg38.chr6_KB021644v2_alt 9937 68 + 185823 ttt-attttttaattt-----tttgagacagaatctcactcttgtcacccaggctggaatgcaatggatgcaat s panTro5.chr6 173464497 68 + 175400573 ttt-attttttaattt-----tttgagacagaatctcactcttgtcacccaggctggaatgcaatggatgcaat i panTro5.chr6 C 0 C 0 s panPan2.chr6 171728342 68 + 173848474 ttt-atgttttaattt-----tttgagacagaatctcactcttgtcacccaggctggaatgcaatggatgcaat i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11412886 68 - 12463322 ttt-attttttaattt-----tttgagacagaatctcactcttgtcacccaggctggaatgcaatggatgcaat i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156239507 67 + 157873769 tttaattttttaattt-----tttgagac--aatttcactctcgtcacccaggctggaatgcaatggatgcaat i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170265805 61 + 172585720 ttt--------tattt-----tttgagacagaatctcactcttgtcacccaggttggaatgtagtggttgcaat i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169011414 61 - 170955103 ttt--------tattt-----tttgagacagaatctcactcttgtcacccaggttggaatgtagtggttgcaat i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8298670 61 + 10161646 ttt--------tattt-----tttgagacagaatctcactcttgtcacccaggttggaatgtagtggttgcaat i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1328099 61 + 3144229 ttt--------tattt-----tttgagacagaatctcactcttgtcacccaggttggaatgtagtggttgcaat i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96607506 61 + 98384682 ttt--------ttttt-----ttttagacagaatctcactcttctcacccaggttggaatgtagtggttgcaat i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8150234 61 - 10857215 ttt--------tattt-----tttgagacagaatctcactcttgtcacccaggttggaatgtagtggttgcaat i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15545909 61 - 23502949 ttt--------tattt-----tttgagacagaatctcactcttgtcacccaggttggaatgtagtggttgcaat i colAng1.NW_012114488v1 C 0 C 0 s canFam3.chr1 56102607 68 + 122678785 ------tagatcatccacaggtttgtgaagccccctcaaccctagcccccaacttgagatgccatgcatgtggt i canFam3.chr1 C 0 I 196 e saiBol1.JH378287 1238476 0 - 2905041 C e aotNan1.NW_018494782v1 1427316 0 - 1813869 C e cebCap1.NW_016107695v1 1190480 0 - 2164891 C e calJac3.chr4 169813613 0 + 171630274 C e dasNov3.JH569188 483526 1638 + 760995 I a score=839869.000000 s hg38.chr6_KB021644v2_alt 10005 152 + 185823 ggtgcaat-----ctcggttcaccgcaacctccgcctcacgggttcaagtgattcttctgcctcagcctcccgagtagctgggactacaggagcccaccaccacgcctagctaatttttttgtatttttagtagagacggggtttcaccgtgttagc s panTro5.chr6 173464565 152 + 175400573 ggtgcaat-----ctcggttcaccgcaacctccgcctcacgggttcaagtgattcttctgcctcagcctcccgagtagctgggactacaggagcccaccaccatgcctggctgatttttttgtatttttagtagagacggggtttcaccgtgttagc i panTro5.chr6 C 0 C 0 s panPan2.chr6 171728410 152 + 173848474 ggtgcaat-----ctcggttcaccgcaacctccgcctcacgggttcaagtgattcttctgcctcagcctcccgagtagctgggactacaggagcccaccaccatgcctggctgatttttttctatttttagtagagacggggtttcaccgtgttagc i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11412954 152 - 12463322 ggtgcaat-----ctcggttcaccgcaacctccgcctcaccggttcaagtgattcttctgccttagcctcccgagtagctgggactacaggagcccaccaccacgcctggctgatttttttgtatttttagtagagacggggtttcaccatgttagc i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156239574 151 + 157873769 ggtgcaat-----ctcggctcactgcaacctccacctccctggttcaagcgattcttctgcctcagcctcccgagtagctgggactacaggagcccgccaccacgcctggctaa-ttttttgtatttttagtacagacggggtttcaccgtgttagc i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170265866 157 + 172585720 tgtgcaatctcagctcagctcactgcaacctccacctcccaggttcaagtgattcttctgcctcagcttcccgagtagctgggactacaggcgcccgccaccacgcctggataattttttggtatttttagtagagacggggtttcaccgtgttagc i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169011475 157 - 170955103 tgtgcaatctcagctcagctcactgcaacctccacctcccaggttcaagtgattcttctgcctcagcttcccgagtagctgggactacaggcgcccgccaccacgcctggataattttttggtatttttagtagagacggggtttcaccgtgttagc i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8298731 157 + 10161646 tgtgcaatctcagctcagctcactgcaacctccacctcccaggttcaagcgattcttctgcctcagcttcccgagtagctgggactacaggcgcccgccaccacgcctggataattttttggtatttttagtagagacggggtttcaccgtgttagc i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1328160 152 + 3144229 tgtgcaat-----ctcagctcactgcaacctccacctcccaggttcaagcgattcttctgcctcagcttcccgagtagctgggactacaggtgcccgccaccacgcctggctaattttttggtatttttagtagagacggggtttcaccgtggtagc i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96607567 152 + 98384682 cgtgcaat-----ctcagctcactgcaacctccgcctcccaggttcaagcgattcttctgcctcagcttcccgagtagctgggactacaggtgcctgccaccacgcctggctaattttttagtatttttagtagagacggggtttcaccatgttagc i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8150295 152 - 10857215 tgtgcaat-----ctcagctcactgcaacctccacctcccaggttcaagcgattcttctgcctcagcttcccgagtagctgggactacaggtgcctgccaccacgcctggctaattttttggtatttttagtagagacggggtttcaccgtgttagc i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15545970 152 - 23502949 catgcaat-----ctcagctcactgcaacttccgcctcccaggttcaagcgattcttctgcctcagcttcccgagtagctgggactacaggtgcccgccaccacgcctggctaatttttttgtatttttggtagagacggggtttcactgtgttagc i colAng1.NW_012114488v1 C 0 C 0 e saiBol1.JH378287 1238476 0 - 2905041 C e aotNan1.NW_018494782v1 1427316 0 - 1813869 C e cebCap1.NW_016107695v1 1190480 0 - 2164891 C e calJac3.chr4 169813613 0 + 171630274 C e dasNov3.JH569188 483526 1638 + 760995 I e canFam3.chr1 56102675 196 + 122678785 I a score=335963.000000 s hg38.chr6_KB021644v2_alt 10157 62 + 185823 cagggtggtctcgatctcctgacctcgtgatcca---------ccagcctcggcctcccaaagtgctggga s panTro5.chr6 173464717 62 + 175400573 cagggtggtctcgatctcctgaccttgtgatcca---------ccagcctcggcctcccaaagtgcgggga i panTro5.chr6 C 0 C 0 s panPan2.chr6 171728562 62 + 173848474 cagggtggtctcgatctcctgacctcgtgatccg---------ccagcctcggcctcccaaagtgctggga i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11413106 62 - 12463322 cagggtggtctcgatctcctgacctcgtgatccg---------ccagcctcggcctcccaaagcgctggga i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156239725 62 + 157873769 cagggtggtctcgatctcctgacctcatgatcca---------cccacctcggcctcccaaagtgctgggt i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170266023 62 + 172585720 tggggtggtctcgatctcctgacctcacgatctg---------cccaccttggcctcccaatgtgctggga i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169011632 62 - 170955103 tggggtggtctcgatctcctgacctcacgatctg---------cccaccttggcctcccaatgtgctggga i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8298888 62 + 10161646 tggggtggtctcgatctcctgacctcacgatctg---------cccaccttggcctcccaatgtgctggga i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1328312 62 + 3144229 tggggtggtctcgatctcctgacctcacgatctg---------cccgccttggcctcccaacatgctggga i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96607719 62 + 98384682 tggggtggtctcgatctcctgacctcactatgtg---------cccacctcggcctcccaacgtgctggga i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8150447 62 - 10857215 tggggtggtctccatctcctgacctcacgatctg---------cccgccttggcctcccaacgtgctggga i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15546122 62 - 23502949 tggggtggtcttgatctcctgacctcacgatctg---------cccgccttggcctcccagtgtgctggga i colAng1.NW_012114488v1 C 0 C 0 s canFam3.chr1 56102871 55 + 122678785 caggg------------catgatctcaggatctgggatcgagtcccacatcgggctccc----tgcaggga i canFam3.chr1 I 196 I 133 e saiBol1.JH378287 1238476 0 - 2905041 C e aotNan1.NW_018494782v1 1427316 0 - 1813869 C e cebCap1.NW_016107695v1 1190480 0 - 2164891 C e calJac3.chr4 169813613 0 + 171630274 C e dasNov3.JH569188 483526 1638 + 760995 I a score=145719.000000 s hg38.chr6_KB021644v2_alt 10219 28 + 185823 --tcacaggcgtgagccaccgcccccggct s panTro5.chr6 173464779 28 + 175400573 --tcacaggcgtgagccaccgcccccggct i panTro5.chr6 C 0 C 0 s panPan2.chr6 171728624 28 + 173848474 --tcacaggcgtgagccaccgcccccggct i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11413168 28 - 12463322 --tcacaggcgtgagccaccgcgcccggct i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156239787 28 + 157873769 --tcacaggcgtgagccaccacccctggct i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170266085 30 + 172585720 ttttataggcatgagctaccgcacccgacc i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169011694 30 - 170955103 ttttacaggcatgagctaccgcacccgacc i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8298950 30 + 10161646 ttttacaggcatgagctaccgcacccgacc i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1328374 30 + 3144229 ttttacaggcgtgagccaccgcacccggcc i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96607781 30 + 98384682 ttttacaggcgtgagccaccgcgcccgacc i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8150509 30 - 10857215 ttttacaggcgtgagccaccgcacccggct i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15546184 30 - 23502949 ttttacaggtgtgagccaccgcgcccagcc i colAng1.NW_012114488v1 C 0 C 0 e saiBol1.JH378287 1238476 0 - 2905041 C e aotNan1.NW_018494782v1 1427316 0 - 1813869 C e cebCap1.NW_016107695v1 1190480 0 - 2164891 C e calJac3.chr4 169813613 0 + 171630274 C e dasNov3.JH569188 483526 1638 + 760995 I e canFam3.chr1 56102926 133 + 122678785 I a score=44235.000000 s hg38.chr6_KB021644v2_alt 10247 8 + 185823 gagacttc s panTro5.chr6 173464807 8 + 175400573 gagacttc i panTro5.chr6 C 0 C 0 s panPan2.chr6 171728652 8 + 173848474 gagacttc i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11413196 7 - 12463322 gaga-ttt i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156239815 8 + 157873769 gagacttt i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170266115 8 + 172585720 aagacttt i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169011724 8 - 170955103 aagacttt i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8298980 8 + 10161646 aagacttt i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1328404 8 + 3144229 gagacttt i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96607811 8 + 98384682 gagacttt i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8150539 8 - 10857215 gagacttt i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15546214 8 - 23502949 gagacttt i colAng1.NW_012114488v1 C 0 C 0 s saiBol1.JH378287 1238476 8 - 2905041 gagacttc i saiBol1.JH378287 C 0 C 0 e aotNan1.NW_018494782v1 1427316 0 - 1813869 C e cebCap1.NW_016107695v1 1190480 0 - 2164891 C e calJac3.chr4 169813613 0 + 171630274 C e dasNov3.JH569188 483526 1638 + 760995 I e canFam3.chr1 56102926 133 + 122678785 I a score=468785.000000 s hg38.chr6_KB021644v2_alt 10255 57 + 185823 tgtgactcagcatcatctttcgagtgtca-------tccccacagccgcatacagcagaacctg s panTro5.chr6 173464815 57 + 175400573 tgtgactcagcatcatctttccagtgtca-------tccccacagctgcgtacagcagaatgtg i panTro5.chr6 C 0 C 0 s panPan2.chr6 171728660 57 + 173848474 tgtgactcagcatcatctttccagtgtca-------tccccacagccgcatacagcagaacatg i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11413203 57 - 12463322 tgtgactcagaatcatctttcgagtgtca-------tccccacagccgcatacagcagaacctg i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156239823 57 + 157873769 tgtgactcagcatcatctttcgagtctca-------tccccacagccgcatacagcagagcctt i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170266123 57 + 172585720 tgtgactcaacatcatctttcgagtctcg-------tccccacagtcgcatacagcagagcctt i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169011732 57 - 170955103 tgtgactcaacatcatctttcgagtctca-------tccccacagtcgcatacagcagagcctt i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8298988 57 + 10161646 tgtgactcaacatcatctttcgagtctcg-------tccccacagttgcatacagcagagcctt i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1328412 57 + 3144229 tgtgactcaacattatctttcgagtctcg-------tccccacagccgcatacagcagagcctt i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96607819 57 + 98384682 tgtgactcaatctcatcttttgagtctcg-------tccccacagccgcatacagcagagcctt i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8150547 57 - 10857215 tgtgactcaacattatctttcgagtctcg-------tccccacagccgcatacagcagagcctt i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15546222 57 - 23502949 tgcgactcaacatcatctttcaagtctcg-------tccccacagccgcatacagcagagcctt i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169813613 52 + 171630274 TGTGACTCGGCTTAACCTTCTGAGTCTCG-------TTCCTTCAGAGGCATACAGCAGA----- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1238484 64 - 2905041 tgtgactcaggaaaaccttttgagtctcgttcccacttcctacagaggcatacagcagaacctt i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1190480 57 - 2164891 tgtgactcagcataaccttttgagtctcg-------ttccctcagaggcatacagcagaacctt i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1427316 57 - 1813869 tgtgactcggcacaagcttttgagtctcg-------tcccctgagaggcatacagcagagcctt i aotNan1.NW_018494782v1 C 0 C 0 e dasNov3.JH569188 483526 1638 + 760995 I e canFam3.chr1 56102926 133 + 122678785 I a score=8955897.000000 s hg38.chr6_KB021644v2_alt 10312 996 + 185823 ctattttatcggtggataacattctgtggtagggatataccatgt--ttttttacctatttaccagctgatgcacgttgggcccttttgccagtcaggcctgtcatgagtaatggtgctaggaaccttcatgcac-----aaggttttttcagaacatatgcacccagttctctcggatacacaagcaggtgtgaaagtgctcatc--------aactttgtgttcggccgtttgaggaactgctcaactgttttcccacaaggctgtaacattttacatttccccaaatgaagtg--caaggttccaaattctccacctcctcgccagc-tcctactattgtctgactttttaattttgtccatcctggcgagtgtgaaagggtatttcactgcagtttcggtttgtatttccccagga--cagtgacatagcacatcttccaatgtgcttattgagcatttgcatattttctttggagaaacgttcattcaaatcatttgcccatttttgagattaggatttt-tttta---attgagttt-aaattgagttatctttatgtgttctagatacaagtatcttactggtgtgatttgcaaatattttgtcccattctgtggatagatactgtctttttacttttttgatggtgtcccttgaagcacaaagtttct----aaattttagtaaaatccaaattatctattta-----------ttgtca--ctgtgcttcag-tgctgtacctaagaaaccattatctaactccagattatgaaggtttacccatgtgttttctcctgtgagtttttccagcttcagtgcttacatttaggtctattatccattcttggctactttttgatgcatgatgaggtagggatatcc----cttcattctttcacat-tagtagtcgaattttcccagcactatttgttagaaaagacaattctttgctcattgaa--ttttcttggcccccttgttgaaaatc-----gtcataaatacgaggatttatttctggactgtcaagtatattctatt s panTro5.chr6 173464872 995 + 175400573 ctattttatcggtggataacattctgtggtagggatataccatgt--ttttt-acctatttaccagttgatgcacgttgggcccttttgccattcaggcctgtcatgagtaattgtgctaggaaccttcatgcac-----aaggttttttgagaacatatgcacccagttctctcggatacacacgcaggtgtgaaagtgctcatc--------aactttgtgttcggccatttgaggaactgctcaactgttttcccacaaggctgtaacattttacatttccccaaatgaagtg--caaggttccaaatccttcgcctcctcgctagc-tcctactattgtctgactttttaattttgtccatcctggcgagtgtgaaagggtatttcattgcagtttcggtttgtatttccccagga--cagtgtcatagcacatcttccaatgtgcttattgagcatttgcatattttctttggagaaacgttcattcaaatcatttgcccatttttgagattaggatttt-tttta---attgaattt-aaattgagttatctttatgtgttctagatacaagtatcttactggtgtgatttgcaaatattttgtcccattctgtggatagatactgtctttttacttttttgatggtgtcccttgaagcacaaagtttct----aaattttagtaaaatccaaattatctattta-----------ttgtca--ctgtgcttcag-tgctgtacctaagaaaccattatctaactccagattatgaaggtttacccatgtgttttctcctgtgagtttttccagcttcagtgcttacatttaggtctattatccattcttggctactttttgatgcgtgatgaggtagggatatcc----cttcattctttcacat-tagtagtcgaattttcccagcactatttgttagaaaagacaattctttgctcattgaa--ttttcttggcccccttgttgaaaatc-----gtcataaatacgaggatttatttctggactgtcaagtatattctatt i panTro5.chr6 C 0 C 0 s panPan2.chr6 171728717 995 + 173848474 ctattttatcggtggataacattctgtggtagggatataccatgt--ttttt-acctatttaccagctgatgcacgttgggcccttttgccagtcaggcctgtcatgagtaatggtgctaggaaccttcatgcac-----aaggttttttgagaacatatgcacccagttctctcggatacacacgcaggcgtgaacgtgctcatc--------aactttgtgttcggccgtttgaggaactgctcaactgttttcccacaaggctgtaacattttacatttccccaaatgaagtg--caagtttccaaattctccgcctcctcgccagc-tcctactattgtctgactttttaattttgtccatcctggcgaatgtgaaagggtatttcattgcagtttcggtttgtatttccccagga--cagtgacatagcacatcttccaatgtgcttattgagcatttgcatattttctttggagaaacgttcattcaaatcatttgcccatttttgagattaggatttt-tttaa---attgaattt-aaattgagttatctttatgtgttctagatacaagtatcttactggtgtgatttgcaaatattttgtcccattccgtggatagatactgtctttttactttttcgatggtgtcccttgaagcacaaagtttct----aaattttagtaaaatccaaattatctattta-----------ttgtca--ctgtgcttcag-tgctgtacctaagaaaccattatctaactccagattatgaagttttacccatgtgttttctcctgtgagtttttccagcttcagtgcttacatttaggtctattatccattcttggctactttttgatgcatgatgaggtagggatatcc----cttcattctttcacat-tagtagtcgaattttcccagcactatttgttagaaaagacaattctttgctcattgaa--ttttcttggcccccttgttgaaaatc-----atcataaatacgaggatttatttctggactgtcaagtatattctatt i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11413260 994 - 12463322 ctattttatcggtggataacattctgtggtagggatataccatgt--ttttt-acctatttaccagctgatgcacgttgggcccttttgccagtcaggcctgtcatgagtaacggtgctaggaacattcatgcac-----aaggttttctcagaacatatgcacccagttctctcggatacacacgcaggcgtgaacgtgctcatc--------aactttgtgttcggccgtttgaggaactgctcaactgttttcccacaaggctgtaacattttacatttccccaaatgaagtg--caaggttccaaattctccgcctcctcaccagc-tcctactattgtctgactttttaattttgtccatcctggcgtgtgtgaaagggtatttcattgcagtttcggtttgtatttccccagga--cagtgacatagcacatcttccaatgtgcttattgagcatttgcatattttctttggagaaacgttcattcaaatcatttgcccatttttgagattaggatttt-tttta---attgagttt-aaattgagttatctttatgtgttctagatacaagtatcttactggtgtgatttgcaaatattttgtcccattctgtggatagatactgtctttttacttttttgatggtgtcccttgaagcacaaagtttct----aaattttagtaaaatccaaattatctattta-----------ttgtca--ctgtgcttcag-tgctgtacctaagaaaccattatctaactccagattatgaaggtttacctatgtgttttctcctgtgag-ttttccagcttcagtgcttacatttaggtctattatccattcttggctactttttgatgcatgatgaggtagggatatcc----cttcattctttcacat-tggtagtcgaatttttccagcactatttgttagaaaagacaattctttgctcattgaa--ttttcttggcccccttgttgaaaatc-----gtcataaatacgaggatttatttctggactgtcaagtatattctatt i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156239880 994 + 157873769 ctatttcatcggtggataacattctgtggtagggatataccacat--ttttt-acccatttctcagctgatggacgttgggcccttttgccagtcatgactgtcatgagtaatggtgctacaaaccttcatgcac-----aaggttttttcagaatgtatgcacccagttctctcggatacacacgcagatatgaatgtgctcgtc--------aactttgtgttcggccatttgaggaactcctcaactgttttcccacaaggctttaacattttacatttccccaaatgaagtg--caaggttccaaattctccgcctcctcaccagcgccctactattgtctgactttcaaattttgtccatcctggcgtgtgtgaaagggtatttcattgcggttgcagtttgtatttccccagga--cagtgatacagcacatcttccaatgtgcttactgagcatttgcatattttctttggagaaacgttcattcaaatcatttgcccatttttgagattaggatttt-tttta---attgagttt-aaattgagttatctttatgtgttctagatacaagtatcttactggtgtgatttgcaaatattttgtcccattctgtggatagacactgtctttttacttttttgatggtgtcccttgaagtacaaagtttct----aaattttaat-aaatcaaaattatctattta-----------ctgtca--ctgggcttcag-tgctgtgtctaagaaaccattgcctaactccagattatgaaggtttactcatctgttttctcctgtgag-ttttccagcttccgtgcttacatttaggtctatgatccattcttggctactttttgatgcatgatgaggtagggatatcc----cttcattctttcacat-tggtagtcgaattgtcccagcacaatctgttagaaaagactgttctttgctcattgaa--ttttattggcccccttgttgaaaatc-----gtcataaatatgaggatttatttctggactgtcaagtatattccact i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170266180 983 + 172585720 ctattttattggtggataacattctatggtaaggatataccatgt--ttttt-acccatttatcaactgatggacattgggccattt---------tgcctgttatgagtaatggtgctacgaacctccgtgcac-----aagatttt-tcagaacgtgtgcactcagttctctcagatacacacgcaggcgtgaaagtgctagtc--------aactttgtgttcggccgttggaggagctgctcaactgttttcccacaaggctgtaacattttacattcatccaaatgaagtg--caagtttccaaattctccgcctcctcaccggt-gcctgctgttgtctgactttttaatattgtccgtcctggcatgtgtaaaagggtatttcattgta-tttcggtttgtatttgcccagga--cagtgacacagcacatcttccaatgtgcttattaagcatttgcatattttctttggagaaatgttcattcaaatcatttgcctatttttgagatccgttttttctttta---attgagttt-aaattgagttatctttatgtgttctagataaaagtattttactggtgtgatttgcaaatattttgtcccattctgtggatagatactgtctgtttacttttttgatggtgtcccttgaagcacaaagtttct----gaattttaataaaatccaaatgatctattta-----------ttgtca--ctgtgcttcag-tgctgtatctgagaaaccattgtctaactccagattatgaaggtttactcatgtgttttctcctgtgag-ttttccagcttcagcgcttacgtttaggtctatgatccactcttggttactttttggtgcatgatgaggtagggataccc----cttcattcttctgcac-tgggagtcgggttgtcccagcacactttgtgagaaaagacgattcctcgctcattgaa--ttgtattgg-ccccttgttgaaaatc-----atcacacatatgaggatttatttctggactgtcaagaatattccact i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169011789 983 - 170955103 ctattttattggtggataacattctatggtaaggatataccatgt--ttttt-acccatttatcaactgatggacattgggccattt---------tgcctgttatgagtaatggtgctacgaacctccgtgcac-----aagatttt-tcagaacgtgtgcactcagttctctcagatacacacgcaggcgtgaaagtgctagtc--------aactttgtgttcggccgttggaggagctgctcaactgttttcccacaaggctgtaacattttacattcatccaaatgaagtg--caagtttccaaattctccgcctcctcaccggt-gcctgctgttgtctgactttttaatattgtccgtcctggcatgtgtaaaagggtatttcattgta-tttcggtttgtatttgcccagga--cagtgacacagcacatcttccaatgtgcttattaagcatttgtgtattttctttggagaaatgttcattcaaatcatttgcctatttttgagattcgttttttctttta---attgagttt-aaattgagttatctttatgtgttctagataaaagtattttactggtgtgatttgcaaatattttgtcccattctgtggatagatactgtctgtttacttttttgatggtgtcccttgaagcacaaagtttct----gaattttactaaaatccaaatgatctattta-----------ttgtca--ctgtgcttcag-tgccgtatctgagaaaccattgtctaactccagattatgaaggtttactcatgtgttttctcctgtgag-ttttccagcttcagcgcttacgtttaggtctatgatccactcttggttactttttggtgcatgatgaggtagggataccc----cttcattcttctgcac-tgggagtcgggttgtcccagcacactttgtgagaaaagacgattcctcgctcattgaa--ttgtattgg-ccccttgttgaaaatc-----atcacacatatgaggatttatttctggactgtcaagaatattccatt i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8299045 983 + 10161646 ctattttattggtggataacattctatggtaaggatataccatgt--ttttt-acccatttatcaactgatggacattgggccgttt---------tgcctgttatgagtaatggtgctacgaacctccgtgcac-----aagatttt-tcagaacgtgtgcactcagttctctcagatacacacgcaggcgtgaaagtgctagtc--------aactttgtgttcggccgttggaggagctgctcaactgttttcccacaaggctgtaacattttacattcatccaaatgaagtg--caagtttccaaattctccgcctcctcaccggt-gcctgctgttgtctgactttttaatattgtccgtcctggcatgtgtaaaagggtatttcattgta-tttcggtttgtatttgcccagga--cagtgacacagcacatcttccaatgtgcttattaagcatttgcgtattttctttggagaaatgttcattcaaatcatttgcctatttttgagattcgttttttctttta---attgagttt-aaattgagttatctttaggtgttctagataaaagtattttactggtgtgatttgcaaatattttgtcccattctgtggatagatactgtctgtttacttttttgatggtgtcccttgaagcacaaagtttct----gaattttaataaaatccaaatgatctatttg-----------ttgtca--ctgtgcttcag-tgccgtatctgagaaaccattgtctaactccagattatgaaggtttactcatgtgttttctcctgtgag-ttttccagcttcagcacttacatttaggtctatgatccactcttggttactttttggtgcatgatgaggtagggataccc----attcattcttctgcac-tgggagtcgggttgtcccagcacactttgtgagaaaagacgattcctcgctcattgaa--ttgtattgg-ccccttgttgaaaatc-----atcacacatatgaggatttatttctggactgtcaagaatattccatt i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1328469 992 + 3144229 ctattttattggtggataacattctatggtaaggatataccatgt--ttttt-acccatttatcaaccgatggacattgggccgttttgcctgtcatgcctgtcatgagtaatggtgctacgaacctccgtgcac-----aagatttt-tcagaacgtgtgcactcagttctctcggatacacatgcaggcgtgaaagtgctagtc--------aactttgtgttcggccgtttgaggagctgctcaactgttttcccacaaggctgtaacattttacattcatccaaatgaagtg--caagtttccaaattctccgcctcctcaccggt-gcctgctgttgtctgattttttaatattgtccatcctggcatgtgtaaaagggtatttcattgta-tttcggtttgtatttccccagga--cagtgacacagcacatcttccaatgtgcttattgagcatttgcatattttctttggagaaatgttcatttaaatcatttgcccatttttgagattagttttttctttta---attgagttt-aaattgagttatctttatgtgttctagataaaagtattttactggtgtgatttgcaaatattttgtcccattctgtggatagatactgtctgtttacttttttgatggtgccccttgaagcacaaagtttct----gaattttaataaaatccaaatgatctattta-----------ttgtca--ctgtgcttcag-tgctgtatctgagaaaccactgtctaattccagattatgaaggtttactcatgtgttttctcctgtgag-ttttccagtttcagcgcttacgtttaggtctatgatccattcttggttactttttgatgcatgatgaggtaaggataccc----cttcattcttctgcac-tgggagtcgggttgtcccagcacactttgttagaaaagacgattcctcgctcattgaa--ttgtattgg-ccccttgttgaagatc-----atcacaaatatgaggatttatttctggactgtcaagaatattccatt i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96607876 986 + 98384682 ctattttattggtggataacattctatggtaaggatataccatgt--ttctt-acccatttatcgactgatggacagtgggccgttttgcctatcatgcctgtcatgagtcatggtgctacgaacctccgtgcac-----aagatttt-tcagaacgtgtacactcagttctctcggatacacacgcaggcgtgaaagtgctagtc--------aactttgtgttcggccgtttgaggagctgctcaactgttttcccacaaggctgtaacatttaacattcatccaaatgaagtg--caagtttccaaattctccgcctcctcaccggt-gcctgctgttgtctgactttttaatattgtccatcctggcatgtgtgaaagggtatttcattgca-ttttggtttgtatttccccagga--cagtgacacagctcatcttccaatgtgcttattgagcatttgcatattttctttggagaaatgttcattcaaatcatttgcctatttttgagattcgttttttctttta---attgagttt-aaattgagttatctttatgtgttctagataaaagtattttactggtgtgatttgcaaatattttgtcccattctgtggatagatactgtctgtttacttttttgatgatgtcccttgaaccacaaagtttct----gaattgtaataaaatccaaatgatctattta-----------ttgtca--ctgtgcttcag-tgctgtatctgagaaaccattgtctaactccagattatgaaggtttactcatgtgttttctcctgtgag-ttttccagcttcagcacttacgtttaggtctatgatccactcttggttactttttgatgcatggtgaggtaggga----------ttcattcttctgcac-tgggagtcgggttgtcccagcgcactttgttagaaaagactattccttgctcattgaa--ttgtattgg-ccccttgttgaaaatc-----atcacacatatgaggatttatttctggactgtcaagaatattccatt i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8150604 992 - 10857215 ctattttattggtggataacattctatgataaggatataccatgt--ttttt-acccatttatcaactgatggacattgggccgttttgcctgtcatgcctgtcatgagtaatggtgctacgaacctccgtgcac-----aagatttt-tcagaacgtgtgcactcagttctgtcggatacacatgcaggcgtgaaagtgctagtc--------aactttgtgttcggccgtttgagaagctgctcaactgttttcccacaaggctgtaacattttacattcatccaaatgaagtg--caagtttccaaattctccgcctcctcaccggt-gcctgctgttgtctgattttttaatattgtccatcctggcatgtgtaaaagggtatttcattgta-tttcggtttgtatttccccagga--cagtgacacagcacatcttccaatgtgcttattgagcatttgcatattttctttggagaaatgttcatttaaatcatttgcccatttttgagattagttttttctttta---attgagttt-aaattgagttatctttatgtgttctagataaaagtattttactggtgtgatttgcaaatattttgtcccattctgtggatagatactgtctgtttacttttttgatagtgcctcttgaagcacaaagtttct----gaattttaataaaatccaaatgatctgttta-----------ttgtca--ctgtgcttcag-tgctgtatctgagaaaccatcgtctaattccagattatgaaggtttactcatgtgttttctcctgtgag-ttttccagtttcagcgcttatgtttaggtctatgatccattcttggttactttttgatgcatgatgaggtaaggataccc----cttcattcctctgcac-tgggagtcgggttgtcccagcacactttgttagaaaagacgattcctcgctcattgaa--ttgtattgg-ccccttgttgaaaatc-----atcacaaataagaggatttatttctggactgtcaagaatattccatt i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15546279 988 - 23502949 ctattttattggtggataacattctatggtaaggatataccgtgt--tgttt-acccatttatcaactgatggacattgggccgttttgcctgtcatgcctgtcatgagtaatggtgctacgaacctccgtgcac-----aagatttt-tcagaacgcgtgcactcagttctctcggatgcacacacaggcgtgaaagtgctagtc--------aactttgtgttcggccgtttgaggagctgctcaactgttttcccacaaggctgtaacattttacattcatccaaatgaagtg--caagtttccaaattctccgcctcctcaccggc-gcctgctgttgtctgactttttaatattgtccatccgggcatgtgtgaaagggtatttcattgta-tttcggtttgtatttccccagga--cagtgacacagcacatcttccaatctgcttattgagcattggcgtattttctttggaggaatgttcattcaaatcatttgcccatttttgagatcagttttttctttta---attgagttt-aaattgagttgtctttatgtgttctagataaaagtattttactggtgtgatttgcaaatattttgtcccattctgtggatagata----ctgtttacttttttgatggtgtcccttgaagcacaaagtttct----gaattttaatcaaatccaaataatctactta-----------ttgcca--ctgtgcttcag-tgctgtatctgagaagccattgtctaattccagattatgaaggtttactcatgtgttttctcctgtgag-ttttccagcttcagcacttacgtttaggactgtgatccattcttggttactttttgatgcatgatgaggtagggataccc----cttcattcttctgcac-tgggagtcgggttgtcccagcacactttgttagaaaagactattccttgctcattgaa--ttgtattga-ccccttgttgaaaatc-----atcacaaatatgaggatttatttctggactatcaagaatattccatt i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169813665 956 + 171630274 ------------------ACACTGTGTGgtagggatacaccacgt--ttttt-acctgtgtatcagttgatggacgtttggtccctt---------tgcctgtcatgagtagtggtgctacacac-ttcatgcacaagtgaagtgtttttcagcatgtgtgcatgcagttctctcagatacacgctcgggcatgaaagcgctagtc--------aacttcgtgttcagcagtttgaggaaccgctcaactgttttcccacgaggcagtaacatttcacactc-accaaatgaagtg--caaggttccaaattc-ccccctcctcaccagt-gcttgctgttgtctgactttttagttctgtccgttctggtgtgtgtgaaa--gtctttcactgcagttgtggtttgtatttccctgggg--cagtgacacagcacaacttcgcacgtgcttgt----tatttgtgtattttctttggagaaatgttcattcaaatcatttgcccatttttgggattaggtttct-tttaa---gttcagttttaaactgagtta--attgagtgtgatagatacaacaatcttattggtgtgatttgcaaatattttgttccattctgtgaatagaaattgt-tttttactttttcgatggtgtcccttgaagcacaaagtctct----aaattttaatgaaatctaagttatctattt-------------tgtta--ctgagcttcag-tgctgtatctaggaaaccactgtctaactccagatgatgaaggtttgctcacgtgttttctcctgcggg-tttttccacatcagcacttccatttgggcctatgatccattcctgatgacctttttgtgcatgacgaggtagggataccc----ctttgttctttggcct-tcgtggtccagttgtcccagcacaatttgtcagaaaagactgttctttgcccattgaa--ttgtagtgg-ccccttgttg-aaacc-----ctcatacctaagaggatttagttct-gactgtcaagtgcattccact i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1238548 963 - 2905041 ctattttactgatggatgacattatatggtagggatataccatgt--ttttt-acctgtttatcagttgatggacgtttggtccttt---------tgcctgtcataagtaatggtgctacgaac-ttcacgcac-----aagtgtttttcagtgcgtgtgcacgcagttctctcggatacacacccgggcgtgaaagcgctagtc--------aacttcgtgttcggcaggtggaggaaccgctcaactgttttcccatgaggcagtcacgtttcacattc-cccaaatgaagtg--caaggttccaaattctccccctcctcaccagt-gcttgctgttgtctgac--tttaattctgtccattctggtgtgtgtgaaa--gtctttcattgcagggttgatttgtatttccctagaa--cagtgacacagcacaacttctcacgtgcttattgagtatttgcatattttctttggagaaatgtccattcaaatcatttgcccgtttttgggattaggtttct-tttaa---attcagtttaaaactgagttatctttatgtgtgatagatacaagaatcttattggtgtg----------attttgtcccattctgtggatagaaattgtctttttactttttcgatggtgtcccttgaagcacaaagtttct----aaattttaatgaaatccaagttatgtattt-------------tgtta--ctgtgctccag-tgctgtatctgggaaaccactgtctaactccaggtgacgaagatttgctcatgtgttttctcctgtagg-ttttcccactt---cgcttctgtttaggcctgtgatccattgctggtcacttttttgtgcatgacaagatagggataccc----ctttgctctctggcct-tggtggtccagttgtcccagcacaatttgttagaaaagactgttctttgcccattgaa--ttgtcatgg-ccccttgttgaaaacc-----ttcataaataagaggatttagttct-gactgccaagtgtattccact i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1190537 977 - 2164891 ctattttactgatggctaaca---tatggtagggatagaccacgt--ttttt-acctatttgtc-gttgatgggcgtttggtccttt---------tgcctcttatgagtaatggtgctacgaac-ttcatgcac-----aagcgtttttcagcacatgtgcacgcagttctctcggatacacactcgggcatgaaagtgctagtc--------aacttcgtgtttggcagtttgaggaactgctcaactgttttcccacgaggcagtaacgtttcacagtc-cccaaatgaagtg--caaggttccaaactctccccctcctcaccagt-gcttgctgttgtctgactttttaattctgtccattctggtgtatgtgaaa--gtctttcattgcagttttggtttgtagttccctagga--cagtgacacagcacaacttctcacgtgattattgagtatttgcatattttatttggagaaatgttcattcaaatcatttgcccgtttttggtattaggtttct-tttaa---attcagtttcaaactgagttatctttatgtgttattgatacaagaatcttattggtgtgatttgcaaatattttgtcccattctgtggatagaaattgtctttttactttttcgatggtgtcccttgaagcacaaagtttct----aaattttagtgaaatccaagttatctattt-------------tgtta--ctgtgcttcag-tgctgtatctaggaaaccaccgtctaactccagatgatgaaggtttgctcacgagttttcccctgtggg--tttcccacttcagcacttccatttaggcctatgatccattcctggttacttttttgtgcatgacgaggtagggatacccctttctttgctctttggcct-tggtggtccagttgtcccagcacgatttgttagaaaagactgttctttgcccattgaa--ttgtcgtgg-ccccttgttgaaagcc-----ctcataaataagaggatttagttct-gaccttcaagtgtattccact i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1427373 959 - 1813869 ctgttttactgatggataacattatatggtagggatataccactt--ttttt-acctgtttatcagctgatgga-atttggtccttt---------tgcctgtcgtgagtaatgttgctacgagc-ttcatgcac-----aagtgtttttcagcacgtgtgcacgcagttctctcggatacacactcgggcgtgaaagcgccagtc--------agcttcgtgttcggcagtttgaggaactgctcaactgttttcccacgaggcagcaacggttcacattc-cccagatgaagcg--caaggttccaaattctccccctcctcgccggt-gcttgctgttgtctgac--tttaattctgtccattctgctgtgtgggaaa--gcctttcattgcagctttggttcgtatctccctggga--cagtgacacagcacaa---cgcacgtgcttattgagtatttgcatattttctttggagaaatgttcattcaaatcgtttgcccattttggggattagatttct-tttaa---attcagtttaaaactgagttatctttatgtattatagatataagaatcttatcggtgtgatttgcaaatattttgtcccattctgtggatagaaattgtctttttactttttcgatggtgtcccttgaagcacaaagtttct----aagttttaatgaaatcccagttatctgttt-------------tgtta--ctgtgcttcag-tgctgtatctgggaagccactgtctaactccagatgacgaagg-------------tttctcctgtggg-ttttcccacttcagcacttccgtttaggcctgtgatccattcctggtgacttttttgtgcatgacgaggaagggatacgc----ctttgatctctggcct-tggtggtccagttgtcccggcacaatttgttagaaaagactgttctttgcctgttgaa--ttgtcgtgg-ccccttgttgaaaacc-----ctcagaaatacgaggatttagttct-gactgtcaagtgtattccact i aotNan1.NW_018494782v1 C 0 C 0 s canFam3.chr1 56103059 952 + 122678785 ttttttgattgatcagtaatgctccattatatggatataccacatactatct-atccattgatccactgatggaca-taagtagttt---------------------------gcactttgaacac---tgttc-----aagt-----tcgggttctgtg---------ctcttggacatacacttcagagtggacttgctaaatcatatggaaactttatgtctagaactttgaggaaccacctcactgtttccccaagtggctttgacactt-gcattc--ccattggcagtggataagcttccaaatttccagtgtcctcattcac-acttgttactg--tgctgttttcatttgagctgcctcagtgcatgcaaaaggagagcttg-tgtggcttcgatttgtatttcctgaacatttaatgctgtagcacctctt---gcgtgcttattagtaactcatatattttctttggagaaatgtctattcagataatttgcccattttctgaagtaaaattgtatctcacgtattaagttg-taagagattt---tagacgtctttcggatacaagtatctttccagtatgatttgcaaatattttg-cctattgtgtggactgggattctctttgcactttctccatagtgtgtcttgaaagaggaggctttttaaaaaattctggtaacatccaatttatctatatatatttttttcttttccagtttctgcttctgatgccgcatctcatcaaccagtgcagagctcaaggtcatgaagatttacccaaatgtattattctgtggg-t---------------------tccgggtctctgacctaa----gtagagtgttatgtagattgtacagaagggtt--cc----cttcattcatctgcacaaggtgacctagttgtcccagctgcatttgtta-aaaggactatcctttgtccattgaaattttttttgacatcactgttgaaaatcaatttatcataaatgtgaggacttatttctggcctctcaattgtattccact i canFam3.chr1 I 133 I 5641 e dasNov3.JH569188 483526 1638 + 760995 I a score=9669009.000000 s hg38.chr6_KB021644v2_alt 11308 1026 + 185823 catgtttttctgcgggtgtctgagtgtctgttatttttc-cttcattcttttcttctttctgctcctaaaatgagatactacgtgttgacttaaatgcaagttctccagttttttcttctactgactcagatctgttgttaagaccctctagggatgttttatttcacctatcacagttttcaactcactccagaacttctatttgattctttt-aaaacagtttctatttattaatgttctctttttggaaatatatcattgtaatcttttaaaaattctttagacagagtttcttttggtgctcgtacatatttataataactgctgtaaagcctgtgcctatttagtctaaaatctgggtgcatttagaaacattttctgttggctgctttttatcctctgtgtgtggcata--ctcctgtttatttacatatcttgtaaa-ttttattgaaaactgaacatttcagataataatatattgaggcgattctagtatcagatttctctacacac-------acccaaatgtttcttgctgttgcagagttttgctgtgttgttagatttgttttcatttcctttgtggctagttgtctgtttagtgacttggcctgactacttttgcagagctctaa-cccctgccacgggtgtctaacctttgggcttccctgagccacacataaaatacacgaatactagccatagctgatgagc-tta---aaaaaaatggtttgtgcatgattttcatgatatccaccaccgcaaataagcaaacaagtccttatattcaaagggttggacatccgtgcctacagcatgtggacactgagctcccagccttttgttaaagcttttcatttcatttttaagcttggctttctaagatttatatctaggccagtgtaatttagtgatcaatcaacgatgggtcagttttctggcatg-------acttccatgtacatttgggccatctctgcgagaaggctttgccttccattgtcaggcagtttatgagacagcctttgcttttaccttctgct s panTro5.chr6 173465867 1026 + 175400573 catgtttttctgcgggtgtctgagtatctgttatttttc-cttcattcttttcttctttctgctcctaaaatgagatactatgtgttgacttaaatgcaagttctccagttttttcttctactgactcagatctgttgttaagaccctctagggatgttttatttcacctatcacagttttcaactcactccagaacttctatttgattctttt-aaaacagtttctatttattaatgttctctttttggaaatatatcattgtaatcttttaaaaattctttagacagagtttcttttggtgctcgtacatatttataataactgctgtaaagcctgtgcctatttagtctaaaatctgggtgcatttaggaacattttctgttggctgctttttatcctctgtgtgtggcata--ctcctgtttatttacatatcttgtaaa-ttttattgaaaactgaacatttcagataataatatattgaggcgattctagtatcagatttctctacacac-------acccaaatgtttcttgctgttgcagagttttgctgtgttgttagatttgttttcatttcctttgtggctagttgtctgtttagtgacttggcctgactacttttgcagagctctaa-cccctgccacgggtgtctaacctttgggcttccctgagccacacataaaatacacgaatactagccatagctgatgagc-ttt---aaaaaaatggtttgtgcatgattttcatgatatccaccaccgcaaataagcaaacaagtccttatattcaaagggttggacatccgtgcctacagcatgtggacactgagctcccagccttttgttaaagctttttatttcatttttaagcttggctttctaagatttatatctaggccagtgtaatttagtgatcaatcaacaatgggtcagttttctggcatg-------acttccatgtacatttgggccatctctgcgagaaggctttgccttccattgtcaggcagtttatgagacagcctttgcttttaccttctgct i panTro5.chr6 C 0 C 0 s panPan2.chr6 171729712 1026 + 173848474 catgtttttctgcgggtgtctgagtgtctgttatttttc-cttcattcttttcttctttctgctcctaaaatgagatactatgtgttgacttaaatgcaagttctccagttttttcttctactgactcagatctgttgttaagaccctctagggatgttttatttcacctatcacagttttcaactcactccagaacttctatttgattctttt-aaaacagtttctatttattaatgttctctttttggaaatatatcattgtaatcttttaaaaattctttagacagagtttcttttggtgctcgtacatatttataataactgctgtaaagcctgtgcctatttagtctaaaatctgggtgcatttaggaacattttctgttggctgctttttatcctctgtgtgtggcata--ctcctgtttattcacatatcttgtaaa-ttttattgaaaactgaacatttcagataataatatattgaggcgattctagtatcagatttctctacacac-------acccaaatgtttcttgctgttgcagagttttgctgtgttgttagatttgttttcatttcctttgtggctagttgtctgtttagtgacttggcctgactacttttgcagagctctaa-cccctgccacgggtgtctaacctttgggcttccctgagccacacataaaatacacgaatactagccatagctgatgagc-ttt---aaaaaaatggtttgtgcatgattttcatgatatccaccaccgcaaataagcaaacaagtccttatattcaaagggttggacatccgtgcctacagcatgtggacactgagctcccaaccttttgttaaagctttttatttcatttttaagcttggctttctaagatttatatctaggccagtgtaatttagtgatcaatcaacgatgggtcagttttctggcatg-------acttccatgtacatttgggccatctctgcgagaaggctttgccttccattgtcaggcagtttatgagacagcctttgcttttaccttctgct i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11414254 1025 - 12463322 catgtttttctgcgggtgtctgagtgtctgttatttttc-cttcattcttttcttctttctgctcctaaaatgagatactatgtgttgacttaaatgcaagttctccagttttttcttctactgactcagatctgttgttaagaccctctagggatgttttatttcacctatcacagttttcaactcactccagaacttctatttgattctttt-aaaacagtttctatttattaatgttctctttttggaaatatatcattgtaatcttttaaaaattctttagacagagtttcttttggtgctcgtacatatttataataactgctgtaaagcctgtgcctatttagtctaaaatctgggtgcatttaggaacattttctgttggctgctttttatcctctgtgtgtggcata--ctcctgtttatttacatatcttgtaaa-ttttattgaaaactgaacatttcagataataatatattgaggcgattctagtatcagatttctctacacac-------acccaaatgtttcttgctgttgcagagttttgctgtgttgttagatttgttttcatttcctttgtggctagttgtctgtttagtgacttggcctgactacttctgcagagctctaa-cccctgccacgggtgtctaacctttgggcttccctgagccacacataaaatacacgaatactagccatagctgatgagc-tt----aaaaaaatggtttgtgcatgattttcatgatatccaccaccgcaaataagcaaacaagtccttatattcaaagggttggacatccgtgcctacagcatgtggacactgagctcccagccttttgttaaagcttttcatttcatttttaagcttggctttctaagatttatatctaggccagtgtaatttagtgatcaatcaacgatgggtcagttttctggcgtg-------acttccatgtacatttgggccatctctgcgagaaggctttgccttccgttgtcaggcagtttatgagacagcctttgctttcaccttctgct i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156240874 1036 + 157873769 catgttgttctgcgggtatctgagtgtctgttatttttt-cttcattcttttcttctttctgctcctaaaatgagatactgtgtgttgacttaaatgcaagttctccagttttttcttctactgactcagatctgttgttaagaccctctagggatgttttatttcacctatcacacttttcaactcactccagaacttctatttgattctttt-gaaacagtttctatttattaatgttcgctttttggaaatatatcattgtaatcttttaaaaattctttagacagagtttctttcggtgctcgtacacatttataataactgctgtaaagcctgtgcctatttagtctaaaatctgggtgcatttaggaacattttctgttggctgctttttatcctctgtgtgtggcatactctcctgtttgtttacatatcttgtaactttttattgaaaactgaacatttcggataataatatattgaggcgattctagtatcagatttctctacacccccgccctcccgaaacgtttcttgctgttgcagagttttgttgtgttgttagatttgttttcatttcctttgtggctagttgtctgtttagtgacttggcctgactacttctgcagagctctaa-cccctgccacggatgtccaacctttgggcttccccgagccacacataaaatacacggatactaaccatagctgatgagc-tta---aaaaaagtggtttgtgcttgatttccatgatatccaccaccacacataagcaaacaaatccttatattcaaagggttgcacatccgtgcctacggcgtgtggacacggagctcccaggcttttgttaaagcttttcatttcatttttaagcttggctttctaagatttatatctaggccagtgtaatttagtgatcaatcaacgatgggtcagTTTTCTGGCGTG-------ACTTCCCTGTACATTTGGGCCATCTCTTCGAGAAGACTTTGCCTTCCATTgtcaagcagtttacgagacagcctttgcttctaccttctgtt i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170267163 1027 + 172585720 catgttgttccatgggtgtctgagtgtctgttagttctt-cttcattcttttcttctttctgctcctcaaatgagatcctctgtgttgacttacctgccagttctccagttttttcttctcctgactcagctctgttgttaagaccctctagggatgttttatttcacctctcacacttttcaactcactccgggacttctatttgattctttt-aaaatagtttctatttattaatgttctctttttggaaacatatcattgtcatcttttaaaaattctttagacagggtttcttttggtgcttgtacacatttataataactgctgtaaaacctgtgcctatttagtctaaaatctgggcgcatttaggaacattttctgttggctgctttttatcctctgtgtgtggcatactctcctgtttatttacatatcttgtaactttttattgaaaactgaacatttcagataataatatattgaggcgattctagtatcggatttctctgcaccc-------ccctaaacgtttcttgctgttgcagagtttggttgtgttgttagatttgttttcatttcctttgtggctagttgtctgtttagtgacttggcctgactccttctgctgagccctaa-cccctgccacgggtgtccaacttttgggcttccctgagccacacataaaatacacgcacactaaccacagctgatgagc-tt-----aaaaaatggtttgtgcatgattttcgtggtatccaccaccacaaataagcaaacaagtccttgtattcagaggattggacatccgtgcctacagcatgtggacactgagctcccagccttttgttaaagcttttcatttcatttttaagcttggctttctaagatttatatctaggccagtgtaatttagtgatcaatcaatgaagggtcggttttccggcgtg-------acctccctgtacatttgggccatctctgagagaaggttttgccttccattatcaagcaatttatgagacagcctttgcttttaccttttgct i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169012772 1027 - 170955103 catgttgttccatgggtgtctgagtgtctgttagttctt-cttcattcttttcttctttctgctcctcaaatgagatcctctgtgttgacttacctgccagttctccagttttttcttctcctgactcagctctgttgttaagaccctctagggatgttttatttcacctctcacacttttcaactcactccgggacttctatttgattctttt-aaaatagtttctatttattaatgttctctttttggaaacatatcattgtcatcttttaaaaattctttagacagggtttcttttggtgcttgtacacatttataataactgctgtaaaacctgtgcctatttagtctaaaatctgggcgcatttaggaacattttctgttggctgctttttatcctctgtgtgtggcatactctcctgtttatttacatatcttgtaactttttattgaaaactgaacatttcagataataatatattgaggcgattctagtatcggatttctctgcaccc-------ccctaaacgtttcttgctgttgcagagtttggttgtgttgttagatttgttttcatttcctttgtggctagttgtctgtttagtgacttggcctgactccttctgctgagccctaa-cccctgccacgggtgtccaacttttgggcttccctgagccacacataaaatacacgcacactaaccacagctgatgagc-tt-----aaaaaatggtttgtgcatgattttcgtggtatccaccaccacaaataagcaaacaagtccttgtattcagaggattggacatccgtgcctacagcatgtggacactgagctcccagccttttgttaaagcttttcatttcatttttaagcttggctttctaagatttatatctaggccagtgtaatttagtgatcaatcaatgaagggtcggTTTTCCGGCGTG-------ACCTCCCTGTACATTTGGGCCATCTCTGAGAGAAGGTTTTGCCTTCCATTgtcaagcaatttatgagacagcctttgcttttaccttttgct i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8300028 1027 + 10161646 catgttgtcccatgggtgtctgagtgtctgttagttctt-cttcattcttttcttctttctgctcctcaaatgagatcctctgtgttgacttacctgccagttctccagttttttcttctcctgactcagctctgttgttaagaccctctagggatgttttatttcacctctcacacttttcaactcactctgggacttctatttgattctttt-aaaatagtttctatttattaatgttctctttttggaaacatatcattgtcatcttttaaaaattctttagacagggtttcttttggtgcttgtacacatttataataactgctgtaaaacctgtgcctatttagtctaaaatctgggcgcatttaggaacattttctgttggctgctttttatcctctgtgtgtggcatactctcctgtttatttacatatcttgtaactttttattgaaaactgaacatttcagataataatatattgaggcaattctagtatcggatttctctgcaccc-------ccctaaatgtttcttgctgttgcagagtttggttgtgttgttagatttgttttcatttcctttgtggctagttgtctgtttagtgacttggcctgactccttctgctgagccctaa-cccctgccacgggtgtccaacttttgggcttccctgagccacacataaaatacacgcacactaaccacagctgatgagc-tt-----aaaaaatggtttgtgcatgattttcgtggtatccaccaccacaaataagcaaacaagtccttgtattcagaggattggacatccgtgcctacagcatgtggacactgagctcccagccttttgttaaagcttttcatttcatttttaagcttggctttctaagatttatatctaggccagagtaatttagtgatcaatcaatgaagggtcggttttccgccgtg-------acctccctgtacatttgggccatctctgagagaaggttttgccttccattgtcaagcaatttatgagacagcctttgcttttaccttttgct i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1329461 1027 + 3144229 catgttgttccacaggtgtctgagtgtctgttagttttt-cttcattcttttcttctttctgctcctcaaatgagatcctctgtgttgacttacctgccagttctccagttttttcttctcctgactcagatctgttgttaagaccctctagggatgttttatttcacctctcacacttttcaactcactccgggacttctatttgattctttt-aaaatagtttctatttattaatgttctctttttggaaacatatcattgtaatcttttacaaattctttagacagagtttcttttggtgctcgtacacatttgtaataactgctgtaaagcctgtgcctatttagtctaaaatctgggcgcatttaggaacattttctgttggctgctttttatcctctgtgtgtggcatactctcctgtttatttacatatcttgtaactttttattgaaaactgaacatttcagataataatatattgaggcgattctagtatcggatttctctgcaccc-------ccctaaacgtttcttgctgttgcagagtttggttgtgttgttagatttgttttcatttcctttgtggctagttgtctgtttagtgacttggcctgactccttctgccgagccctaa-cccctgccacgggtgtccaacttttgggcttccctgagccacacataaaatacacgcacactaaccacagctgatgagc-tt-----aaaaaatggtttgtgtatgattttcgtggtatccaccaccacaaataagcaaacaagtccttgtattcagaggattggatatccgtgcctacagcatgtggacactgagctcccagccttttgttaaagcttttcatttcatttttaagcttggctttctaagatttatatctaggccagtgtaatttagtgatcaatcaacgatgggtcggTTTTCCGGCGTG-------ACCTCCCTGTACATTTGGGCCATCTCTGTGAGAAGGTTTTGCCTTCCATTgtcaagcagtttatgagacagcctttgcttttaccttttgct i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96608862 1027 + 98384682 catgttgttccacgggtgtctgagtgtctgttagttttt-cttcattcttttcttctttctgctcctaaaatgagatcctctgtgttgacttacctgccagttctccagtgttttcttctcctgactcagatctgttgttaagaccctctaggaatgttttatttcacctctcacacttttcaactcactccgggacttctatttgattctttt-aaaatagtttctatttattaatgttctcttttaggaaacatatcattgtaatcttttaaaaattctttagacagggtttcttttggtgctcgtacacatttataataactgctgtaaagtctgtgcctatttagtctaaaatctgggcgcatttaggaacattttctgttggctgcttttcatcctctgtgtgtggcatactctcctgtttatttacatatcttgtaactttttattgaaaaccgaacatttcagataataatatattgaggcgattctagtattggatttctctgcaccc-------ccctaaacgtttcttgctgttgcagagtttggttgtgttgttagatttgttttcatttcctctgtggctagttgtctgtttagtgacttggcctgactccttctgccgagccctaa-cccctgccatgggtgtccaacttttgggcttccctgagccacacataaaatacacgcacactaaccacagctgatgagc-tt-----aaaaaatggtttgtgcatggttttcgtggtatccaccaccacaaataagcaaacaagtccttgtattcagaggattggacatccgtgcctacagcatgtggacactgagctcccagccttttgttaaagcttttcatttcatttttaagcttggctttctaagatttatatctaggtcagtgtaatttagtgatcaatcaatgaagggtcggTTTTCCAGCGTG-------ACCTCCCTGTACATTTGGGCCATCTCTGAGAGAAGGTTTTGCCTTCCATTgtcaagcaatttatgagacagcctttgcttttaccttttgct i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8151596 1027 - 10857215 catgttgttccacaggtgtctgagtgtctgttagttttt-cttcattcttttcttctttctgctcctcaaatgagatcctctgtgttgactgacctgccagttctccagttttttcttctcctgactcagatctgctgttaagaccctctagggatgttttatttcacctctcacacttttcaactcactccgggacttctatttgattctttt-aaaatagtttctatttattaatgttctctttttggaaacatatcattgtaatcttttacaaattctttagacagagtttcttttggtgctcgtacacatttgtaataactgctgtaaagcctgtgcctatttagtctaaaatctgggcgcatttaggaacattttctgctggctgctttttatcctctgtgtgtggcatgctctcctgtttatttacatatcttgtaactttttattgaaaactgaacatttcagataataatatattgaggcgattctagtatcggatttctctgcaccc-------ccctaaacgtttcttgctgttgcagagtttggttgtgttgttggatttgttttcatttcctttgtggctagttgtctgtttagtgacttggcctgactccttctgctgagccctaa-cccctgccacgggtgtccaacttttgggcttccctgagccacacataaaatacacgcacactaaccacagctgatgagc-tt-----aaaaaatggtttgtgcatgattttcgtggtatccaccaccacaaataagcaaacaagtccttgtgttcagaggattggatatccgtgcccacagcatgtggacactgagctcccagccttttgttaaagcttttcatttcatttttaagcttggctttctaagatttatacctaggccagtgtaatttagtgatcaatcaacgatgggtcggttttccggcgtg-------acctccctgtacatttgggccatctctgtgagaaggttttgccttccattgtcaagcaatttatgagacagcctttgcttttaccttttgct i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15547267 1026 - 23502949 catgttgttccatgggtgtctgagtgtctgttagtttttccttcattcttttcttctttctgctcctaaaatgagatcctctgtgttgacttacctgccagttctccagttttttcttctcctgactcagatctgttgttaagaccctctagggacgttttatttcacctctcacacttttcaactcgctccaggacttctatttgattctttt-aaaatagtttctatttattaatgttctctttttggaaacatatcattgtaatcttttaaaaattctttagacagagtttctttgggtgctcgtacacatttataataactgctgtaaagcctgtgcctatttagtctaaaatctgggcgcatttaggaacattttctgttggctgctttttatcctctgtgtgtggcatactctcctgtttatttacatatcttgtaactttttattgaaaactgaacatttcagataataatatattgaggcgattctagtatcggatttctctgcaccc-------ccctaagcgtttcttgctgttgcagagtttggttgtgttgttagatttgtttCCATTTCCTTTGTGGCTAGTTGTCTGTTTAGTGACTTGGCCTGACTCCTTCTGCTGAGCCCTAA-CCCCTGCTacgggtgtccaacttttgggcttccctgagccacacataaaatactcgcacactaaccatagctgatgagc-tt------aaaaatggtttgtgcatgattttcgtggtatccaccaccacaaataagcaaacaagtccttgtattcagagggttagacaTGTGTGcctacagcatgtggacactgagctgccagccttttgttaaagcttttcatgtcatttttaagcttggctttctaagatttatatctaggccagtgtaatttagtgatcaatcaacgatgggtcggttttccggcgtg-------acctccctgtacatttgggccatctctgcgagaaggttttgcctt-cattgtcaagcagtttatgagacagcctttgcttttacctgctgct i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169814621 1030 + 171630274 CACGTtgttcgaaaggtgtctgagtgcctgctatttttt-cttca----ttttttctttctgctcctgaaatgagatactgtgtgttaacttacctgcaagttctccagttttttcttctgctgactcaaatctgttgttaagaccctctagagatgttctatttcacctatggcacttttcaactcactccagaacttctatttggttctttt-aaaatcatttctacttattaatgttctctttttggaaatatactcttgtagtcttgttaaaatgctttaggcagagtttcttttggtgcttgtacacacttataataactgatataaagcctgtgtcttttcaggctaaagtctgggcccatttaggagcattttccgttggctgctttctatcctccgtgtgtggcttactctcttgtttatttacatatcttgtaactttttattgaaaactcaacatttcagataataatacatggaggtgattctagtatcggatttctccaca-cc-------ccc--agtgtttgttgtCGTTGCAGAGTTTCGCTGTGTCGTTAGATTTGTTGCCATTTCCTGTGTGGCTGGTTGTCTGTTGAGTGACTTGACCCGACTACTTTGGCAGAGCCCTGATCCCCTCCcgcaggtgtccaacctttcagcctccccgagccacacgtaaattacagtaacactaaccatagctgatgagcttta---aaaaaaaagatttctgcctgattttcatgatatctgccaccacaaataagcaagcaagtgtttatattcaaagggctaaacatcTGTGCCTACAGCACGTGGACATGGAGGTCCC-GCCTTTTGTTAAAGCTCTTTACTTTATTTTTAAGCTTGGCTTTCTAAGATTTATATCTAGGCCAGTGTCATTTAGTGATCGAGGAATGATGGGTTGGTTTTCTGGCGTGTTTTAACGTTTCCCTGGACACTTGGGCCATCTCTGTGAGAATGCTTTGCCTTCGATTgtcaggcagtttacgagacagcctttgctttgactttctgct i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1239511 998 - 2905041 catgttgttccaccagtgactgagtgcctgttatttttt-cttca----ttttttctttctgctcctaaaatgagatactatgtgttgactttcctgcaagttctccagatttttcttctgccgactcaaatctgttgttaagaccctctagagatgttttatttcacctattgcactttccaactcactccagatcttctatttggttcttttaaaaatcatttctacttattactgtcctctttttggaaataccctcttgtagtcttgttaaaattctttaggcagagtttcttttggtgcctgtacacatttataataactgatgtaaagcctgtgcctatttagtctaaagtctgggcccatttaggagcattttccgttggctgctttctgtcctctgtgtgtggcttactctcttgtttatttacatatcttgtaactttttattgaaaactcaacatttcagataataatatattgaggcgattctagtatcgtatttctctacagcc-------ccc--aaagtttgttgtc------------------------------tttgccatttcctgtgtggctgg-tgcccatttagtgacttgacccgactacttctgcagagccctga--cccccctgcaggtgtccaacctctcggcttccccgagccacacataaaatacgctaacactcaccacagctgaggagc-tta---aaaacagagatttgtgcctgattttcaggatatccgccaccacaaataagcaaacaactgtttatattcaaagggctgaacacctgagcctacagcatgtggacatggaagtccc-gccttttgttaaagctcttcattttatttttaagcttggctttctaagatctatatctaggccagtgtaatttagtgatagaggaatgacgggctgattttctggcatgttttaatgttttcctgtatatttgggccatctttgtgagaacgctttgccttcgattgtcgggcggtttatgagacagcctttgcttttactttctgct i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1191514 1025 - 2164891 Cacgttgttccacaggtgtctgagtgcctgttatttttt-cttcg----ttttttctttctgctcctaaagtgagatactgtgtgttgacttacctgcaagttctccagttttttcttctgctgactcaaatctgttgttaagaccctctagagatgttttatttcacctattgcacttttcaactcactccagaacttctatttggttatttt-aaaatcatttctacttattaatgttctctttttggaaatacactcttgtagtcttattaaagttctttaggc--agttccttttggtgcttgtacacatttataataactgatgtaaagcctgttcctatttagtctgaagtctgggcccatttaggagcattttccattggcagctttctatcctccgtgtgtggcttactctcttgtttatttacatatctcgtaactttttattgaaaactcaacatttcagataataatatattgaggcgattttagtatcggatttctctacagcc-------ccc--aatgtttgttgtcattgcagagtttcactttgtcgttagatttgttgacatttc---tgtggctggttgtctgtttagtgacttgacccgaccacttctgcagagccctgatcccctctcgcaggtgtgcaacctttcggcctcccggagccacacataaaatacactaacactaaccatagctgatgagc-tta---aaaaaaaagatttgtgcctgattttcatgatatccaccaccacaaataagcaaacaagtgtttatattcaaagggttgaacatctgtgcctacggcacatggacatgaaggtccc-gccttttgttaaagctctttattttatttttaagcttggctttctaagatttatatctaggccaatgtaatttagtgatcacggaatgatgggttggttttctgttgtgttttaatgtttccctgtacatttgggccatctctgtgagaatgctttgcctttgattgtcaggcagtttatgagacaggctttgcttttactttctgct i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1428332 1031 - 1813869 CGtgttgctccacaggtgtctgagtgcctgctatttttt-cttca----ttttttctttctgctcctaaaatgagatactatgcgttgacttacctgcaagttctccagttttttcttctgctgactctaatctgttgttgagatcctctagagatgttttatttcacctattgcacttttcaactcactccagaacttctatttggttctttt-aaaatcatttctacttattaatgttctctttttggaaatacactcttgtagtcttgtaaaaactctttaggcagagtttcttttggtgc-tgtacacattcacaataaccgacgtaaagcctgtgcctgttcagtctaaagtctgggtccatttaggagcattttccgttggccgctttctctcctccatgtgtggcttactctcctgtttatttacatatcttgtaactttttattgaaaactcaacatttcagataataatatattgaggcgattctagtatcggatttctccacaccc-------ccc--gatgtttgttgtcgttgcagag-ttcactgtgttgttagatttgttgccatttcctgtgtggctggttgtctgtttagtgacttgacccgactactcctgcagagccctgatcccctcccgcaggtgtccaacctttcggcctccccgagccacacacaaaatacactaacacttaccatagctgaagagc-ttaaagaaaaaaaagatttgttcctgattttcatgatatccaccaccacaaataagcaaacaagtgtttatattcaaagggctgaacatctgtgcctacagcacgtggacatggaggtcct-gccttttgttaaagctctttattttatttttaagcttggctttctaagatttatatctaggccagtgtaatttagtgatcaaggaacgatgggttggttttctggcgtgtgttaatgtttccctgtacatttgggccatctctgtgagaatgctttgccttcgattgtcaggcagtttatgagactgcctttgcttttactttctgct i aotNan1.NW_018494782v1 C 0 C 0 e dasNov3.JH569188 483526 1638 + 760995 I e canFam3.chr1 56104011 5641 + 122678785 I a score=3682065.000000 s hg38.chr6_KB021644v2_alt 12334 373 + 185823 tgcacagggcctcgaggtcagccaggggtgaggggctcctgccttcttcctccccagagctgtcctaggagtgcccgcagtctggcagacatgctcggcct---tgcaggca---------cccagctctcctatgttcatac--gtatccagg-atttccctttaaatttctggtcagtttaaatttctgctctcagtttgccccaacTGAAGT------------------------------CTATTTCTATTGCTTTGGTAATGCTTTTAGGTTCTCCATTCTGTCCTCTCAACCCCAGACACCCCCAACTGAGCTAAGAGTCAAGTGTAACAGCCCCACACTGAATATAGAGATTTCCCAGGGAGCTGCAAGTTCCTGTGAAATATTGACTATGTTCTGGGCATGTTGTTTTT s panTro5.chr6 173466893 375 + 175400573 tgcacagggcctcgaggtcagccaggggtgaggggctcctgccttcttcctccccagagctgtcctaggagtgcccgcagtctggcagacatgctcggcct---tgcaggca---------cccagctctcctatgttcatacaggtatccagg-atttccctttaaatttctggtcagtttaaatttctgctctcagtttgccccaacTGAAGT------------------------------CTATTTCTATTGCTTTGGTAATGCTTTTAGGTTCTCCATTCTGTCCTCTCAACCCCAGACACCCCCAACTGAGCTAAGAGTCAAGTGTAACAGCCCCACACTGAATATAGAGATTTCCCAGGGAGCTGCAAGTTCCTGTGAAATATTGACTATGTTCTGGGCATGTTGTTTTT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171730738 375 + 173848474 tgcacagggcctcgaggtcagccaggggtgaggggctcctgccttcttcctccccagagctgtcctaggagtgcccgcagtctggcagacatgctcggcct---tgcaggca---------cccagctctcctatgttcatacaggtatccagg-atttccctttaaatttctggtcagtttaaatttctgctctcagtttgccccaacTGAAGT------------------------------CTATTTCTATTGCTTTGGTAATGCTTTTAGGTTCTCCATTCTGTCCTCTCAACCCCAGACACCCCCAACTGAGCTAAGAGTCAAGTGTAACAGCCCCACACTGAATATAGAGATTTCCCAGGGAGCTGCAAGTTCCTGTGAAATATTGACTATGTTCTGGGCATGTTGTTTTT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11415279 374 - 12463322 tgcacagggcctcgaggtcagccaggggtgaggggctcctgcctccttcctccccagggctgtcctaggagtgccc-cagtccggcagacatgctcggcct---tgcaggca---------cccagctctcctatgttcatacaggtatccagg-atttccctttaaatttctggtcagtttaaatttctgctctcagtttgccccaacTGAAGT------------------------------CTATTTCTATTGCTTTGGTAATGCTTTTAGGTTCTCCATTCTGTCCTCTCAACCCCAGACACCCCCAGCTGAGCTAAGAGTCAAGTGTAACAGCCCCACACTGAATATAGAGATTTCCCAGGGAGCTGCAAGTTCCTGTGAAATATTGACTATGTTCTGGGAATGTTGTTTTT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156241910 375 + 157873769 tgtacagggcctcgaggtcagccaggggtgagggactcctgcctccttcctccccagggtcgtcctaggagtgcccgcagtccagcagacatgctcggcct---tgcaggca---------ctcagctctcctgtgttcatccaggtatccagg-atttccctttaaatttctggtcagtttaaatttctgctctcagcttgccccaactgAAGT------------------------------CTATTTCTATTGTTTTGGTAATGCTTTTAGGTTCTCCATTCTGTCCTCTCAACCCCAGACACCTCCAACTGAGCTAAGAGTCAAGTGTAACAGCCCCACACTGAATATAGAGATTTCCCAGGGAGCTGCAAGTTCCTGTGAAATATTGACTATGTTCTGGGAATGTTGTTTTT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170268190 375 + 172585720 tgcacagggcctcgaggtcagccaggggtgaggggctcctgcctccttcctccccagagctgtccgaggagtgcccgtagtccagcacacacgcttagcct---tgcaggca---------cccagctctcctatgttcatccaggtatccagg-atttccctttaaatttctgggcagcttaaatttctgttctcagtttgccccaactgatgt------------------------------ctaTTTCTATTGTTTTGGTAATGCTTTTAGGTTCTCCATTCTGTCCTCCCAACCCCAGACACCCCCAACTGAGCTAAGAGTCAAGTGTAATAGCCCCACACTGAATATAGAGATTTCCCTGGGAGCTGCAAGTTCCTGTGAAATACTGACTATGTTCTGGGAATGTTGTTTTT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169013799 375 - 170955103 tgcacagggcctcgaggtcagccaggggtgaggggctcctgcctccttcctccccagagctgtccgaggagtgcccgtagtccagcacacacgcttagcct---tgcaggca---------cccagctctcctatgttcatccaggtatccagg-atttccctttaaatttctgggcagcttaaatttctgttctcagtttgccccaactgatgt------------------------------ctaTTTCTATTGTTTTGGTAATGCTTTTAGGTTCTCCATTCTGTCCTCCCAACCCCAGACACCCCCAACTGAGCTAAGAGTCAAGTGTAATAGCCCCACACTGAATATAGAGATTTCCCTGGGAGCTGCAAGTTCCTGTGAAATACTGACTATGTTCTGGGAATGTTGTTTTT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8301055 375 + 10161646 tgcacagggcctcgaggtcagccaggggtgaggggctcctgcctccttcctccccagagctgtccgaggagtgcccgtagtccagcacacacgcttagcct---tgcaggca---------cccagctctcctatgttcatccaggtatccagg-atttccctttaaatttctgggcagcttaaatttctgttctcagtttgccccaactgAGGT------------------------------CTATTTCTATTGTTTTGGTAATGCTTTTAGGTTCTCCATTCTGTCCTCCCAACCCCAGACACCCCCAACTGAGCTAAGAGTCAAGTGTAATAGCCCCACACTGAATATAGAGATTTCCCTGGGAGCTGCAAGTTCCTGTGAAATACTGACTATGTTCTGGGAATGTTGTTTTT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1330488 374 + 3144229 tgcacagggcttcgaggtcagccaggggtgaggggctcctgcctccttcctccccagagctgtcctaggagtgcccgtagtccagcacacacgcttagcct---tgcaggca---------cccagctctcctatgttcatccaggtatccagg-atttccctttaaacttctgggcagcttaaa-ttctgttctcagtttgccccaactgAGGT------------------------------CTATTTCTATTGTTTTGGTAATGCTTTTAGGTTCTCCATTCTGTCCTCCCAACCCCAGACACCCCCAACTGAGCTAAGAGTCAAGTGTAATAGCCCCACACTGAATATAGAGATTTCCCTGGGAGCTGCAAGTTCCTGTGAAATACTGACTATGTTCTGAGAATGTTGTTTTT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96609889 375 + 98384682 tgcacagggcctcgaggtcagccaggggtgaggggctcctgcctccttcctccccagagctgtcctaggagtgcccgtagtccagcacacacgcttagcct---tgcaggca---------cccaCCTCTCCTATGTTCATCCAGGTATCCAGG-ATTTCCCTTTAAATTTCTGGGCAGCTTAAATTTCTGTTCTCAGTTTGCCCCAAATGAGGT------------------------------CTATTTCTATTGTTTTGGTAGTGCTTTTAGGTTCTCCATTCTGTCCTCCCAACCCCAGACACCCCCAACCGAGCTAAGAGTCAAGTGTAATAGCCCCACACTGAATATAGAGATTTCCCTGGGAGCTGCAAGTTCCTGTGAAATACTGACTATGTTCTGGGAATGTTGTTTTT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8152623 374 - 10857215 tgcacagggcctcgaggtcagccaggggtgaggggctcctgcctccttcctccccagagctgtcctaggagtgcccgtagtccagcacacacgcttagcct---tgcaggca---------cccagctctcctatgttcatccaggtatccagg-atttccctttaaatttctgggcagcttaaa-ttctgttctcagtttgccccaactgAGGT------------------------------CTATTTCTATTGTTTTGGTAATGCTTTCAGGTTCTCCATTCTGTCCTCCCAACCCCAGACACCCCCAACTGAGCTAAGAGTCAAGTGTAATAGCCCCACACTGAATACAGAGATTTCCCTGGGAGCTGCAAGTTCCTGTGAAATACTGACTATGTTCTGGGAATGTTGTTTTT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15548293 375 - 23502949 ggcacagggccttgaggtcagccaggggtgaggggctcctgcctccttcctccccagagctgtcctaggagtgcccgtagtccagcacacacgcttagcct---tgcaggca---------cccagctctcctatgttcatccaggtatccagg-atttccctttaaatttctggtcagcttaaatttctgctctcagtttgccccaactgAAGT------------------------------CTATTTCTATTGTTTTGGTAATGCTTTTAGGTTCTCCATTCTGTCCTCCCAACCCTAGACACCCCCAACTGAGCTAAGAGTCAAGTGTAATAGCCCCACACTCAATATAGAAATTTCCCTGGGAGCTGCAAGTTCCTGTGAAATACTGACTATGTTCTGGGAATGTTGTTTTT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169815651 363 + 171630274 tgcacagggcctcggggtcagcca-ggggcaggggctgcagcctccttCCTCCCCAGGGATTTCTCAGGAGTGCTCACAGTCCCACAGACATGCTCAGCCC---TGCAGGCA---------CCCAGCTCTCCTCTGTCCATCCAGGTGTCCAGGAATTTCCCTTTACATTTCTGGTCAA-----------GCTCTCAG-GTTGCCCAGCTGAAGT------------------------------CAATTTCTACTGATGTGGTAATGCTCTTAGCTTCTCCATTCTGTCCTCCCAACCCCAGACACCCCCAACTGAGCTAAGAGTCAACTGCAATAGACAAACTCTGAAGAGAGAGATTTCCCAGGGAGCTGCAAGTTCCTGTGGAATATTGAGGATGTTGTGGGAACGTTGTTTTT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1240509 363 - 2905041 tgcacagggcctcgaggtcagcca-gggtgaggggctccagcctccttcctccccagggatttcttaggagtgcttgcagtcccgcagacgtgctcagcct---tgcaggca---------cccagctctcctatgctcatccaggtatccaggaatttccctttacatttctggtaaa-----------gctctcag-ttgccccagctgAAGT------------------------------CAATTTCTATTGTTTTGGTAATGCTCTTAGGTTCTGCATTCTGTCCTCCCAACCCCAGGCACCCCCAACTGAGCCAAGAATCAAGTCCAATAGGCATACACTGAATAGAGAGATTTCCCAGGGAGCTGTAAGTTCCCTTGGAATATTGAGAATGTTGTGGGAATGTTGTTTTT i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1192539 362 - 2164891 tgcacagggcctcaaggtcagcca-gggtgaggggctccagcctccttcctccccagggatttcgtaggagtgctcgaagtcccgcagacatgctcagcct---tgtaggaa---------cccagctctcctatgttcat--aggtatccaggaatttccctttaaatttctggtaaa-----------gctctcagtttgccccagcTGAAGT------------------------------CAATTTCTATTGTTTTGGTAATGCTTTTAGGTTCTCCATTCTGTCCTCCCAACCCCAGATACCCCCAACTGAGCTAAGAGTCAAGCTCAATAGACATACACTGAATAGAGAGATTTCCCAGGGAGCTGCAAGTTCCTGTGGAATATTGAGGATGTTGTGGGAATGCTATTTTT i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1429363 364 - 1813869 tgcacagggcctcgagttcggccg-gggtgagggtctccagcctccttcctgcccagggatttcttacgagtgctcgcagtcccgcagatatgctcagcct---tgcaggca---------cccagctctcctatgttcatccaggtatccaggaatttccctttaaatttctggtcaa-----------gctctcagtttgccccagcTGAAGT------------------------------CAATTTCTATTGTTTTGGTAATGCTGTTAGGTTCTCCACTCTGTCCTCCCAACCCCAGACACCCCCAACTGAGCTAAGAGTCAAGTCCAATAGACATACACTGAATAGAGAGATTTCCCAGGGAGCTGCAAGTTCCTGTGGAATACTGAGGCTGTCGTGGGAATGTTGTTTTT i aotNan1.NW_018494782v1 C 0 C 0 s canFam3.chr1 56109652 346 + 122678785 tatacagggcctcaaggtcagctagaggagaatgactcctgccctcttctt-cccaactctttcctaggcatgcacgcg--tctgcagacatacatagtctatacacagccaggaatatgtttaagcttccct-tgttcatctagtgttccagg-attt-cctttaactttcatgtaa------------gttctcagttt-ccccagctgaaatcagagcctgaggcagctgagatACTGCCAGCAGGTGCTATTGTTCTGGTAATGTCCTGAGCTTC--AGTTTTGTCCCTT------------CTCCCAACTGAG---------------------------------------ACTTCCCAGACAGACGCAAGTCCACACATAACGCTCACTGTGTTCTGGGGGTGATGCTTTT i canFam3.chr1 I 5641 I 343 e dasNov3.JH569188 483526 1638 + 760995 I a score=957247.000000 s hg38.chr6_KB021644v2_alt 12707 96 + 185823 AATGGAATATTGAAATTGGTAACATTTCTTTACCAGCTTTTGACTACCACAAATGGGCTAAGGAGGGAGGAAAAATGAATGTAGCCCCAAATTAAA s panTro5.chr6 173467268 96 + 175400573 AATGGAATATTGAAATTGGTAACATTTCTTTACCAGCTTTTGACTACCACGAATGGGCTAAGGAGGGAGGAAAAATGAATGTAGCCCCAAATTAAA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171731113 96 + 173848474 AATGGAATATTGAAATTGGTAACATTTCTTTACCAGCTTTTGACTACCACGAATGGGCTAAGGAGGGAGGAAAAATGAATGTAGCCCCAAATTAAA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11415653 96 - 12463322 AATGGCATATTGAAATTGGTAACATTTCTTTACCAGCTTTTGACTACCACAAATGGGCTAAGGAGGGAGGAAAAATGAACGTAGCCCCAAATTAAA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156242285 96 + 157873769 AATGGAACATTGAAATTGGTAACATTTCTTTACCAGCTTTTGGTTACCACAAATGAGCTAAAGAGGGAGGAAAAATGAATGTAGCCCCAAATTAAA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170268565 96 + 172585720 AATGGAATATTGAAATTGGTAAAATTTCTTTGCCAGCTTTTGGCTACCACACATGAGCTAAGGAGGATGGAAAAATGAATGTAGCCCCCAATTAAA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169014174 96 - 170955103 AATGGAATATTGAAATTGGTAAAATTTCTTTGCCAGCTTTTGGCTACCACACATGAGCTAAGGAGGATGGAAAAATGAATGTAGCCCCCAATTAAA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8301430 96 + 10161646 AATGGAATATTGAAATTGGTAAAATTTCTTTGCCAGCTTTTGGCTACCACACATGAGCTAAGGAGGGTGGAAAAATGAATGTAGCCCCCAATTAAA i macNem1.NW_012011000v1 C 0 I 18 s cerAty1.NW_012002071v1 1330862 96 + 3144229 AATGGAATATTGAAATTGGTAAAATTTCTTTGCCAGCTTTTGGCTACCACACATGAGCTAAGGAGGGTGGAAAAATGAATGTAGCCCCCAATTAAA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96610264 96 + 98384682 AATGGAATATTGAAATTGGTAAAATTTCTTTGCCAGCTTTTGGCTACCACACATGAGCTAAGGAGGGTGGAAAAATGAATGTAGCCCCCAATTAAA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8152997 96 - 10857215 AATGGAATACTGAAATTGGTAAAATTTCTTTGCCAGCTTTTGGCTACCACACATGAGCTAAGGAGGGTGGAAAAATGAATGTAGCCCCCAATTAAA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15548668 96 - 23502949 AATGGAATATTGAAATTGGTAAAATTTCTTTGCGAGCTTTTGGCTACCACACATGAGCTAAGGAAGGTGGAAAAATGAATGTAGCCCCCAATTAAA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169816014 96 + 171630274 AATGGAACATTGAAGTTGGTAAAATCTCTTTACCAGCTTTTGGCTCCCACAAATGAGCTAAGGAGGAAGGAAAAATGAATGTGGCCCCAAAGTAAA i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1240872 96 - 2905041 AATGGAATATTGAAATTGATAAAATCTATTTACCAGCTTTTGGCTACCACAAATGAGCTAAGGAGGGAGGAAAAATGCATGTAGCCCCAAATTAAA i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1192901 96 - 2164891 AATGGAATATTGAAATTGATAAAATCTCTTTACCAGCTTTTGGCTACCACAAATGAGCTAAGGAGGGAGGAAAAATGAATGTAGCCCCAAATTAAA i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1429727 96 - 1813869 AATGGAATATTGAAATTGATAAAATCTCTTTACCAGCTTTTGGCTATCACAAATGAGCTAAGGAGGGAGGAAAAATGAATGTAGCCCCAAATTAAA i aotNan1.NW_018494782v1 C 0 C 0 e dasNov3.JH569188 483526 1638 + 760995 I e canFam3.chr1 56109998 343 + 122678785 I a score=42312.000000 s hg38.chr6_KB021644v2_alt 12803 5 + 185823 GTTCT s panTro5.chr6 173467364 5 + 175400573 GTTCT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171731209 5 + 173848474 GTTCT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11415749 5 - 12463322 GTTCt i gorGor5.CYUI01015032v1 C 0 I 11 s nomLeu3.chr3 156242381 5 + 157873769 GTTCT i nomLeu3.chr3 C 0 I 11 s rheMac8.chr4 170268661 5 + 172585720 GTTCT i rheMac8.chr4 C 0 I 11 s macFas5.chr4 169014270 5 - 170955103 GTTCT i macFas5.chr4 C 0 I 11 s cerAty1.NW_012002071v1 1330958 5 + 3144229 GTTCT i cerAty1.NW_012002071v1 C 0 I 11 s chlSab2.chr13 96610360 5 + 98384682 GTTCT i chlSab2.chr13 C 0 I 11 s manLeu1.NW_012106474v1 8153093 5 - 10857215 GTTCT i manLeu1.NW_012106474v1 C 0 I 11 s colAng1.NW_012114488v1 15548764 5 - 23502949 GTTCT i colAng1.NW_012114488v1 C 0 I 11 s calJac3.chr4 169816110 5 + 171630274 GTGCt i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1240968 5 - 2905041 GTGCt i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1192997 5 - 2164891 GTGCt i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1429823 5 - 1813869 GTTCt i aotNan1.NW_018494782v1 C 0 C 0 e dasNov3.JH569188 483526 1638 + 760995 I e canFam3.chr1 56109998 343 + 122678785 I e macNem1.NW_012011000v1 8301526 18 + 10161646 I a score=3356439.000000 s hg38.chr6_KB021644v2_alt 12808 372 + 185823 ----------ggggtcctgatccagaccccaggagagggttcttggatctcacacaagaaggaattcagggtgagtccacagtgcagagtaaaaa-aggatgag--------ttcatgtcctttgcagagacatggatgaagctggaaaccatcattctcagcaaactaacacaggaacaaaaaaccaaacaccgcatgttctcactcataaacgggagttgaacaatgagaacacatggacacaaggaggggaacatcacacactggggcctgtca-cagggtg------gggagctaggggagggagagcattaggagaaatacctaatgtagatgacgggttgatgggt-cagcaaaccaccatggcacgtgtatacctatgtaacaaacctgcac s panTro5.chr6 173467369 371 + 175400573 ----------ggggtcctgatccagaccccaggagagggttcttggatctcacgcaagaaggaattcagggtgagtccacagtgcagagtaaaaa-aggatgag--------ttcatgtcctttgcagagacatggatgaagctggacaccatcattctcagcaaactagcacaggaacagaaaaccaaacgccgcatgttctcactcataaatgggagttgaacaatgagaacacatggacacaagg-ggggaacatcacacactggggcctgtca-gagggtg------gggcgctaggggagggagagcattagaagaaatacctaatgtagatgacgggttgatgggt-cagcaaaccgccatggcacgtgtatacctacgtaacaaacctgcac i panTro5.chr6 C 0 C 0 s panPan2.chr6 171731214 371 + 173848474 ----------ggggtcctgatccagaccccaggagagggttcttggatctcacgcaagaaggaattcaggttgagtccacagtgcagagtaaaaa-aggatgag--------ttcatgtcctttgtagagacatggatgaagctggacaccatcattctctgcaaactaacacaggaacagaaaaccaaacgccgcatgttctcactcataaatgggagttgaacaatgagaacacatggacacaacg-ggggaacatcacacactggggcctgtca-gagggtg------gggagctaggggagggagagcattagaagaaatacctaatgtagatgacgggttgatgggt-cagcaaaccgccatggcacgtgtatacctatgtaacaaacctgcac i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11415765 372 - 12463322 ----------ggggtcctgatccagaccccaggagagggttcttggatctcacgcaagaaggaattcagggtgagtccacagtgcagagtaaaaa-aggatgag--------ttcatgtcctttgcagagacacggatgaagctggaaaccatcattctcagcaaacaaacacaggaacagaaaaccaaacaccgcatgttctcactcataaacgggagttgaataatgagaacacgtggacacagggaggggaacatcacacactggggcctgtca-gagggtg------gggagctaggggagggagagcattaggagaaatacctaatgtagatgacgggttgatgggt-cagcaaaccgccatggcacgtgtatacctatgtaacaaacctgcac i gorGor5.CYUI01015032v1 I 11 C 0 s nomLeu3.chr3 156242397 372 + 157873769 ----------ggggtcccaatccagaccccaagagaggcttcttggatcttacgcaagaaggaattcagggtgagtccacagtgcagagtaaaaa-tggatgag--------ttcatgtcctttgcagggacatggatgaagctggaaaccatcattctcagcaaactaacacaggaacagaaaaccaaagactgcatgttctcactcataagcgggagttgaacaatgagaacacacggacacagggaggggaacatcacacaccagggcctgtca-gagggtg------gggagctaggggagggagagcattaggagaaatatgtaatgtagatgatgggttgatgggt-cagcaaaccaccatggcacttgtatacctatgtaacaaacctgcac i nomLeu3.chr3 I 11 C 0 s rheMac8.chr4 170268677 357 + 172585720 ----------ggggtcccgatccaga--------------ttttggatctcacgcaagaaggaattccgggtgagtccacagtgcagagtaaaaa-aggatgag--------ttcatgtcctttgtagggacatggatgaagctggaaaccatcattctcagcaaactaacacaggaacagaaaaccaaacactgcatgttctcactcataagtgggagttgaacgatgagaacacatggatacagggaggggaacatcacacactggggcctgtca-tgaggt-------gggagct-ggggagcgacagcagtaggagaaatatctaatgtagatgacaggttgatgggtgtagcaaaccaccatggcatgtgtatacctatgtaacaaacctgcac i rheMac8.chr4 I 11 C 0 s macFas5.chr4 169014286 357 - 170955103 ----------ggggtcccgatccaga--------------ttttggatctcacgcaagaaggaattccgggtgagtccacagtgcagagtaaaaa-aggatgag--------ttcatgtcctttgtagggacatggatgaagctggaaaccatcattctcagcaaactaacacaggaacagaaaaccaaacactgcatgttctcactcataagtgggagttgaacgatgagaacacatggatacagggaggggaacatcacacactggggcctgtca-tgaggt-------gggagct-ggggagcgacagcagtaggagaaatatctaatgtagatgacaggttgatgggtgtagcaaaccaccatggcatgtgtatacctatgtaacaaacctgcac i macFas5.chr4 I 11 C 0 s macNem1.NW_012011000v1 8301544 331 + 10161646 ----------ggggtcccgatccaga--------------ttttggatctcacgcaagaaggaattccgggtgagtccacagtgcagagtaaaaa-aggatgag--------ttcatgtcctttgtagggacatggatgaagctggaaaccatcattctcagcaaactaacacaggaacagaaaaccaaacactgcatgttctcactcataagtgggag--------------------------gggaggggaacatcacacactggggcctgtca-tgaggt-------gggagct-ggggagcgacagcagtaggagaaatatctaatgtagatgacaggttgatgggtgtagcaaaccaccatggcatgtgtatacctatgtaacaaacctgcac i macNem1.NW_012011000v1 I 18 C 0 s cerAty1.NW_012002071v1 1330974 358 + 3144229 ----------ggggtcccaatccaga--------------ttttggatctcacgcaagaaggaattccgggtgagtccacagtgcagagtaaaaa-aggatgag--------ttcatgtcctttgcagggacatggatgaagctggaaaccatcattctcagcaaactagcacaggaacagaaaaccaaacactgcatgttctcactcataagtgggagttgaacgatgagaacacatggacacagggaggggaacatcacacactggggcctgtca-tgaggt-------gggagctaggggagggacagcagtaggagaaatatctaatgtagatgacaagttgatgggtgtagcaaaccaccatggcatgtgtatacctatgtaacaaacctgcac i cerAty1.NW_012002071v1 I 11 C 0 s chlSab2.chr13 96610376 358 + 98384682 ----------ggggtcccgatccaga--------------ttttggatctcacgcaagaaggaattctgggtgagtccacagtgcagagtaaaaa-aggatgag--------ttcatgtcctttgcagggacatggatgaagctggaaaccatcattctcagcaaactaacacagtaacagaaaaccaaacactgcatgttctcactcataagtgggagttgaatgatgagaacacatggacacagggaggggaacatcacacactggagcctgtca-tggggt-------gggagctaggggagggacagcagtaggagaaatatctaatgtagatgacaggttgatgggtgtagcaaaccaccatggcacgtgtatacctttgtaacaaacctgcac i chlSab2.chr13 I 11 C 0 s manLeu1.NW_012106474v1 8153109 365 - 10857215 ----------ggggtcccgatccaga--------------ttttggatctcacgcaagaaggaattccgggtgagtccacagtgcagagtaaaaa-aggatgag--------ttcatgtcctttgcagggacatggatgaagctggaaaccatcattctcagcaaactaacacaggaacagaaaaccaaacactgcatgttctcactcataggtgggaattgaacaatgagaacacttggacacagggaggggaacatcacacactggggcctgtca-tgaggtgggaggagggagctaggggagggacagcagtaggagaaatatctaatgtagatgacaggttgatgggtgcagcaaaccaccatggcatgtgtatacctatgtaacaaacctgcac i manLeu1.NW_012106474v1 I 11 C 0 s colAng1.NW_012114488v1 15548780 358 - 23502949 ----------ggggtcctgatccaga--------------tcttggatctcacgcaagaaggaattcagggtgagtccacagtgcagagtaaaaa-agaatgag--------ttcatgtcctttgtagggacatggatgaagctggaaaccatcattctcagcaaactaacacaggaacagaaaaccaaacaccgcatgttctcactcgtaagtgggagttgaacgatgagaacacatggacacagggaggggaacatcacataatggggcctgtca-tggggt-------gggagttaggggagggacagcagtaggagaaatatctaatgtagatgacaggttgatgggtgtagcaaaccaccatggcacgtgtataactatgtaacaaacctgcac i colAng1.NW_012114488v1 I 11 M 380 s calJac3.chr4 169816115 383 + 171630274 gtaacgggaaacggtcccgatccagaccccaagggagggttcttggacttcacgtaagaaagaattcagggtgagtccacagttcagaggaaaaagaaaatgag--------ttcatgtcctttgcagggacatggatgaagctggaaaccatcattctcagcaaactaacacaggaacagaaaaccaagcaccgcacgttctcactcatgagtgggagttgaacggtgagaacacatggactcagggaggagaacatcacacactgggg-ctgtcg-gggggtg------agggcctgggggagggagagcatctggagaaatacctaatgtagatgacaggttgatgggtgcagcaaaccactgtggcatgtgtatacttatgtaataaacctgcac i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1240973 387 - 2905041 gtaacaggaaagggtcccgatccagaccccaagagagggttcttggacttcatgtaagaaagaattcagggcgagtccgc-gtgcagagtaaaaagaaaatgagtttCTGTCTTTCtgtcctttgcagggacatggatgaagctggaaaccatcattctcagaaaactaacacaggaaccgaaaaccaaacaccgcatgttctcactcacaagtgggagttgaacaatgagaacacacggacacagggaggggagcgtcacacaccagggcctgttg-ggggata------ggggcctgggggagggagagcatcaggacaaatacctaatgtagacgacgggttgacgggtgcagcaaacccctgtggcatgtgtatacctatgtaataaTTTT---- i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1193002 384 - 2164891 gtaacaggaaagggtcctgatccagaccccaagagagggttcttggacttcacataagaaagaactcagggtgagtccgaagtgcagagtaaaaagaaaatgag--------tttatgtcctttgcagggacatggatgaagctggaaaccatcattctcagcaaactaacacaggaacagaaaaccaagcaccgcatgttctcactcataagagggagttgaacaatgagaacgcatggacacagggaggggaacatcacacaccggggcctgtcg-gtgggta------ggggcctgagggagggatagcatcaggagaaatacctaatgcagatgacgggttgatgggtgccccaaaccactgtggcatgtgtatacctatgtaataaacctgcat i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1429828 385 - 1813869 gtgagaggaaagggtcccgatccagacctcaagagagggttcttggacttcacgtaagaaagaattcagggtgagtccgcagtgcagagtaaaaaggaaatgag--------tctatggcctttgcaggcacatggatgaagctggaaaccaccattctcagcaaactaacacaggaacagaaaaccaaacaccacatgttctcactcataagtgggagttgaacaatgagaacacgtggacacagggaggggaacatcacacaccggggcctgtcacggggggt------gggacctgggggagggatagcatcaggagaaatacctaatgtagatgacgggttgatgggtgcagcaaaccaccgtggcatgtgtatacttatgtaataaacctgcac i aotNan1.NW_018494782v1 C 0 C 0 e dasNov3.JH569188 483526 1638 + 760995 I e canFam3.chr1 56109998 343 + 122678785 I a score=205161.000000 s hg38.chr6_KB021644v2_alt 13180 38 + 185823 gttctgcacatgtatcctggaacttaaagtatTataat------ s panTro5.chr6 173467740 32 + 175400573 gttctgcacatgtatcctggaacttaaagtat------------ i panTro5.chr6 C 0 C 0 s panPan2.chr6 171731585 32 + 173848474 gttctgcacatgtatcctggaacttaaagtat------------ i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11416137 32 - 12463322 gttctgcacatgtatcctggaacttaaagtat------------ i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156242769 32 + 157873769 attctgcacatgtatcctggaacttaaagtat------------ i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170269034 32 + 172585720 gttctgcacatgcatcttggaacttaaagtat------------ i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169014643 32 - 170955103 gttctgcacatgcatcctggaacttaaagtat------------ i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8301875 32 + 10161646 gttctgcacatgcatcctggaacttaaagtat------------ i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1331332 32 + 3144229 gttctgcacatgcatcctggaacttaaagtat------------ i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96610734 32 + 98384682 gttctgcacatgcatcctggaacttaaagtat------------ i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8153474 32 - 10857215 gttctgcacatgcatcctggaacttaaagtat------------ i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169816498 38 + 171630274 attctgcacttgtatcccagaactcaaagtat------aataat i calJac3.chr4 C 0 I 305 s saiBol1.JH378287 1241360 4 - 2905041 -----------------------TTAA----------------- i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1193386 38 - 2164891 gttctgcacgtgtatcccagaactcaaagtat------aataat i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1430213 38 - 1813869 gttctgcatgtgtatcccagaactcaaagtat------aataat i aotNan1.NW_018494782v1 C 0 C 0 e dasNov3.JH569188 483526 1638 + 760995 I e colAng1.NW_012114488v1 15549138 380 - 23502949 M e canFam3.chr1 56109998 343 + 122678785 I a score=9019.000000 s hg38.chr6_KB021644v2_alt 13218 26 + 185823 aataataataataa------------taataataataa s panTro5.chr6 173467772 17 + 175400573 ---------aataa------------taataataataa i panTro5.chr6 C 0 C 0 s panPan2.chr6 171731617 14 + 173848474 ------------aa------------taataataataa i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11416169 14 - 12463322 ------------aa------------caataataataa i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156242801 11 + 157873769 ---------------------------aataataataa i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170269066 17 + 172585720 ---------aatag------------taataataataa i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169014675 17 - 170955103 ---------aatag------------taataataataa i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8301907 20 + 10161646 ---------aatag---------taataataataataa i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1331364 29 + 3144229 ---------aatagtaataataataataataataataa i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96610766 20 + 98384682 ---------aataa---------tgatgatgataataa i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8153506 14 - 10857215 ---------aata---------------gtaataataa i manLeu1.NW_012106474v1 C 0 C 0 s aotNan1.NW_018494782v1 1430251 3 - 1813869 ------------------------ttt----------- i aotNan1.NW_018494782v1 C 0 C 0 e saiBol1.JH378287 1241364 0 - 2905041 C e cebCap1.NW_016107695v1 1193424 0 - 2164891 C e calJac3.chr4 169816536 305 + 171630274 I e dasNov3.JH569188 483526 1638 + 760995 I e colAng1.NW_012114488v1 15549138 380 - 23502949 M e canFam3.chr1 56109998 343 + 122678785 I a score=234771.000000 s hg38.chr6_KB021644v2_alt 13244 29 + 185823 taataataaagcaagtttatgaagaaagt s panTro5.chr6 173467789 29 + 175400573 taataataaagcaagtttatgaagaaagt i panTro5.chr6 C 0 C 0 s panPan2.chr6 171731631 29 + 173848474 taataataaagcaagtttatgaagaaagt i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11416183 29 - 12463322 taataataaagcaagtttatgaagaaagt i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156242812 29 + 157873769 taataataaagcaagtttatgaagaaagt i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170269083 29 + 172585720 taataataaagcaagtttatgaagaaagt i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169014692 29 - 170955103 taataataaagcaagtttatgaagaaagt i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8301927 29 + 10161646 taataataaagcaagtttatgaagaaagt i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1331393 29 + 3144229 taataataaagcaagtttatgaagaaagt i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96610786 29 + 98384682 taataataaagcaagtttatgaagaaagt i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8153520 29 - 10857215 taataataaagcaagtttatgaagaaagt i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169816841 29 + 171630274 tttttaaaaagcaagtttattaagaaagt i calJac3.chr4 I 305 C 0 s saiBol1.JH378287 1241364 22 - 2905041 -------aaagcaagtttattaagaaagt i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1193424 29 - 2164891 ttcttaaaaagcaagtttattaagaaagt i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1430254 26 - 1813869 ---taaaaaagcaagtttattaagaaagt i aotNan1.NW_018494782v1 C 0 C 0 e dasNov3.JH569188 483526 1638 + 760995 I e colAng1.NW_012114488v1 15549138 380 - 23502949 M e canFam3.chr1 56109998 343 + 122678785 I a score=4242854.000000 s hg38.chr6_KB021644v2_alt 13273 470 + 185823 aaaggaataaaagaatggctactccatagacagagcagccccaagagctgctggttgcccatttttatggctatttcttgatgatatgctaaacaaggggtggattattcctatctcctctttttaaaccat-tagggtaacttcctgacattgtcatggtacttgtaaact--------gtcatggcgctggtgggagtgtagcagtgaggacagccagaggtcactcttgttgccattttggatttggtgggttttggccggctcctttactgcaacctgttttatcagcaaggtctttgtggtctgtattttgtgctgacctcttatttcatcctgtgacttagaatgccttcaccatctgggaatgcagcccagtaggtctcagcctcgttttacccagctcctatttaagatggagttgctcaggttcacacgcctctgacaGTGCCACCTATCTATTTCACC-----AGCCTCCTGGT s panTro5.chr6 173467818 478 + 175400573 aaaggaataaaagaatggctactccatagacagagcagccccaagagctgctggttgcccatttttatggttatttcttgatgataggctaaacaaggggtggattattcctatctcctctttttaaaccat-tagggtaacttcctgacattgtcatggtacttgtaaacttgtaaactgtcatggcgctggtgggagtgtagcagtgaggacagccagaggtcactcttgttgccattttggatttggtgggttttggccggctcctttactgcaacctgttttatcagcaaggtctttgtggcctgtattttgtgctgacctcttatttcatcctgtgacttagaaagccttcaccatctgggaatgcagcccagtaggtctcagccttgttttacccagctcctatttaagatggagttgctctggttcacacgcctctgacaGTGCCACCCGTCTATTTCACC-----AGCCTCCTGGT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171731660 478 + 173848474 aaaggaataaaagaatggctactccatagacagagcagccccaagagctgctggttgcccatttttatggttatttcttgatgatatgctaaacaaggggtggattattcctatctcctctttttaaaccat-tagggtaacttcctgacattgtcatggtacttgtaaacttgtaaactgtcatggcgctggtgggagtgtagcagtgaggacagccagaggtcactcttgttgccattttggatttggtgggttttggccggctcctttactgcaacctgttttatcagcaaggtctttgtggcctgtattttgtgctgacctcttatttcatcctgtgacttagaaagccttcaccatctgggaatgcagcccagtaggtctcagcctcgttttacccagctcctatttaagatggagttgctttggttcacacgcctctgacaGTGCCACCCGTCTATTTCACC-----AGCCTCCTGGT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11416212 470 - 12463322 aaaggaataaaagaatggctactccatagacagagcagccccaagagctgctggttgcccatttttatggttatttcttgatgatatgctaaacaaggggtggattattcctatctcctcttttgaaaccat-tagggtaacttcctgacattgtcgtggtacttgtaaact--------gtcatggcgctggtgggagtgtagcagtgaggacagccagaggtcactcttgttgccattttggatttggtgggttttggccggctcctttactgcaacctgttttatcagcaaggtctttgtggcctgtattttgtgctgacctcttatttcatcctgtgacttagaatgccttaaccatctgggaatgcagcccagtaggtctcagcctcgttttacccagctcctatttaaggtggagttgctctggttcacacgcctctgacaGTGCCACCTATCTATTTCACC-----AGCCTCCAGGT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156242841 463 + 157873769 gaaggaataaaagaatggctactccat----agagcagccccaagagctgctggttgcccatttttatggttatttctttatagtatgctgaacgaggggtggattattcatatctcccctttttagaccatatagggtaacttcctgacattgtcctggtacttgtaaact--------gtcatggcactggtaggagtgtagcagtgaggacagccagaggtcactcttgtcgccattttggttttggtggggtttggccggctcttttactgcgacctgttttatcagcgaggtcttcgtggcctgtattttgtgctgacctcttatttcatcctgtgacttagaatgccttaaccatctgggaatgcagcccagtaggtctcagcctcgttctacccagctgctatttaagatggagttgctgtggttcgcgtgcctctgacaGTGCCAC----CTATTTCACC-----AGCCTCCGGGT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170269112 476 + 172585720 aaaggaataaaagaatggctgctccatagacacagcagccccaagggctgctcgttgcccatttttatggctatttcttgatgatatgttaaacaagggatggattattcgtatctcctctttttagaccatatagggtaatgttccgacattgtcatggtgcttgtaaact--------gtcatggcgctgctgggagtgtagcagtgaggtcagccagaggtcactcttgttgccatcttggttttggtggattttggcctgctcctttactgcaccctgttttatcagcaaggtctttaggacctctattttgtgctgacctcctgtctcattctgtgactgagaatgccttcaccatctgggaatgccgcccaggaggtcgcagccttgttttacccaggtcctgtttaagacggagttgctctggttcacacgcctctggcaGTGCCACCTATCTATTTCACCAGACTAGACTCCAGGT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169014721 476 - 170955103 aaaggaataaaagaatggctgctccatagacacagcagccccaagggctgctcgttgcccatttttatggctatttcttgatgatatgttaaacaagggatggattattcgtatctcctctttttagaccatatagggtaatgttccgacattgtcatggtgcttgtaaact--------gtcatggcgctgctgggagtgtagcagtgaggtcagccagaggtcactcttgttgccatcttggttttggtggattttggcctgctcctttactgcaccctgttttatcagcaaggtctttaggacctctattttgtgctgacctcctgtctcattctgtgactgagaatgccttcaccatctgggaatgccgcccaggaggtcgcagccttgttttacccaggtcctgtttaagacggagttgctctggttcacacgcctctggcaGTGCCACCTATCTATTTCACCAGACTAGACTCCAGGT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8301956 476 + 10161646 aaaggaataaaagaatggctgctccatagacacagcagccccaagggctgctcgttgcccatttttatggctatttcttgatgatatgttaaacaagggatggattattcgtatctcctctttttagaccatatagggtaatgttccgacattgtcacggtgcttgtaaact--------gtcatggcgctgctgggagtgtagcagtgaggtcagccagaggtcactcttgttgccatcttggttttggtggattttggcctgctcctttactgcaccctgttttatcagcaaggtctttaggacctctattttgtgctgacctcctgtctcattctgtgactgagaatgccttcaccatctgggaatgccgcccaggaggtcgcagccttgttttacccaggtcctgtttaagacggagttgctctggttcacacgcctctggcaGTGCCACCTATCTATTTCACCAGACTAGACTCCAGGT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1331422 476 + 3144229 aaaggaataaaagaatggttgctccatagacacagcagccccaagggctgctcgttgcccatttttatggctatttcttgatgatatgttaaacaagggatggattattcgtatctcctctttttagaccatatagggtaatgttccgacattgtcatggtgcttgtaaact--------gtcatggcgcagctgggagtgtagcagtgaggtcagtcagaggtcactcttgttgccatcttggttttggtggatttgggcctgcttctttactgcaccctgttttatcagcaaagtctttaggacctctattttgtgctgacctcctgtctcatcctgtgactgagaatgccttcatcatctgggaacgccgcccagtaggtcgcagcctcgttttacccgggtcctgtttaagatggagttgctctggttcgcatgcctctggcaGTGCCACCTATCTATTTCACCAGACTAGACTCCAGAT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96610815 476 + 98384682 aaaggaattaaagaatagctactccatagacacagcaaccccaagggttgctcgttacccatttttatgcctatttcttgatgatatgttaaacaaaggatggattattcgtatctcctctttttagaccatatagggtaatgtcccgacattgtcatggtgcttgtaaact--------gtcatggcactgctgggagtgtagcagtgaggtcagccggagatcactcttgttgccatcttggttttggtggattttggccggctcctttactgcaccctgttttatcagcaaggtctttaggacctctattttgtgctgacctcctgtctcatcctgtgactgagaatgccttcaccatctgggtacgccgcccagtaggtcgcagcctcgttttacccagctcctgtttaagacggagttgctctggttcacatgcctctggcaGTGCCACCTATCTATTTCACCAGACTAGACTCCAGGT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8153549 476 - 10857215 aaaggaataaaagaatggttgctccatagacacagcagccccaagggctgctcgttgcccatttttatggctatttcttgatgatatgttaaacaagggatggattattcgtatctcctctttttagaccagatagggtaatgttccgacattgtcatggtgcttgtaaact--------gtcatggcgcagctgggagtgcagcagtgaggtcagccagaggtcactcttgttgccatcttggttttggtggatttgggcctgctcctttactgcaccctgttttatcagcaaagtctttaggacctctattttgtgctgacctcctgtctcatcctgtgactgagaatgccttcatcatctgggaacgccgcccagtaggtcgcagcctcgttttacccaggtcctgtttaagatggagttgctctggttcgcatgcctctggcaGTGCCACCTATCTATTTCACCAGACTAGACTCCAGAT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15549518 471 - 23502949 aaaggaataaaagaatggctactccatagacacagcaaccccaagcgctgcttgttgcccatttttatggcaatttcttggtgatatgttaaacaaggggtggattattcgtatctcctctttttagaccatatagggtaatgttccaacattgtcatggtgcttgtaaact--------gtcatggcgctgctgggagtgtagcagtgaggtcagccagaagtcactcttgttgccatcttggtttcggtggattttggccggctcctttactgcaccctgttttatcagcaaggtctttaggacctctattttgtgctgacctcctgtctcatcctgtgactgagaatgccttcaccatctggggatgccgcccaggaggtcgcagccttgttttacccagttcctgtttaagatggagttgctctggttcacacgcctctggcaGTGCCACCTATCTATTTCACC-----AGACTCCAGGT i colAng1.NW_012114488v1 M 380 C 0 s calJac3.chr4 169816870 458 + 171630274 aaaggaataaaagagtggccactccatagacagagcagcccggagggcccctggctgcccatttttctggctatttcttggtcatacgctaaacaa--ggtggattattcacaccttttctttttagaccatataagg-aacttcctgacattgccatggcgtttgtaaact--------gtcatggcactgaggggagggcagcagtgaggacagccagaggtcaccctcgtagccattttggttttggtgg--ttttgccggctccttgcctgcagcctgttttatcagcaaggtctttatgacctg-atcttgtgctgacctcctgtctcatcccgtgacttagaatgccttaaccatctgcaagtgtagcctagtaagtctcagtctca-tttacc------ctgttcaagatggagtcgctgtggttcacatgcctctgacaGTGCCACCCACCTATTTCACC-----AGATTTCAGGT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1241386 462 - 2905041 aaaggaataaaagactggccactccatagacagagcagcccagagcgcccctgcctgcccgtttttat-gttatttcttggtgatatgctaaacaaggggtggattattcacgcctcccctttttaagccgtataagg-aacttcctgacgttgccatggcatttgtaaact--------gtcatggcgctggggggagtgcagcagtgaggacagccagaggtcactctcgtcgccattttggttttggtgggttttggccggctcctttactgcagactgttttatcagcaaggtctttatgacctgtatcttgtgctgacctcctgtctcatcctgtgacttagaatgccttaaccatctggaa-tgtaggctagtagatcccagcctcattttacc------ccgttcaagatggagtcgctgtggttcacatgcctctgacaGTGCCAcccacctatttcacc-----agatttcaggt i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1193453 464 - 2164891 aaaggaataaaagagcggccactccatagacagagcagcctggagggcccctggctgcccgtttttatggttattttttggtgatatgctaaacaaggggtggattattcacacctcccctttttagactgtataagg-aacttcctgacgttgccatggcatttgtaacct--------gtcatggcactggggggagtgcagcagtgaggacagccataggtcactctcgtcgccattttggttttggtggtttttggccggcccctttactactgcgtgttttatcagcaaggtctttatgacctgtatcttgtgctgacctcctgtctcatcctgtgacttaaaatgccttaaccatctgttagtgtagcctaggaggtctcagcctcacgttacc------ctgttcaagatggagttgctgtggttcacatgcctctgacaGTGCCAcccacctatttcacc-----agatttcaggt i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1430280 464 - 1813869 aaaggaataaaaaagtggccactccatagacagagcagcctggagggcccctggctgcccatttttatggttatttcttggtgatatgctaaacaaggggtggatcattcacacctcctctttttagaccatacaagg-aacttcctgacgttgccatggcatttgtaaacc--------gtcacggcgctgatgggagtgcagcagtgaggacagccagagggcgctcgcgtcgccatcttggttttggtgggttttggcgggctcctttactgcagcctgttttatcagcaaggtctttgtgacctgtatcttgtgctgacctcctgtctcatcctgtggctgagaatgccttcaccgtctggaagtgtagcctagtaggtctcagcctcattttacc------ctgttcaagatggagtcgctgtggttcacatgcctctgacaGTGCCACCCACCTAGTTCACC-----AGATTTCAGGT i aotNan1.NW_018494782v1 C 0 C 0 e dasNov3.JH569188 483526 1638 + 760995 I e canFam3.chr1 56109998 343 + 122678785 I a score=2654367.000000 s hg38.chr6_KB021644v2_alt 13743 258 + 185823 TTCCTTTGGATAGAGAATTTTCAGCGCATTCT-TTGCTTTGGTGAATTACCAGAATTCTGAACTGGCTTATTTTAGTTGTTTTGCAAGTATTTTCACTGTTTTCGTTGGAAAGCAAGCTCACTGAGG-------TCTCACGTTCCAGAAG-----CCAGTCTCTTTCAATGGTATTTGGTGATTGCTAATCTAGAGATAACAATTAGAAAACAAACCCAACCTGGTGTATT-----TAAAAAAATACTCAGTGCATTCTAGG-AAACTTCTGGGAAT s panTro5.chr6 173468296 258 + 175400573 TTCCTTTGGATAGAGAATCTTCAGCGCATTCT-TTGctttggtgaattaccagaattctgaactggctcattttagttgttttgcaagtattttcactgttttcgttggaaagcaagctcactgagg-------tcTCGCGTTCCAGAAG-----CCAGTCTCTTTCAATGGTATTTGGTGATTGCTAATCTAGAGATAACAATTAGAAAACAAACCCAACCTGGTGTATT-----TAAAAAAATACTCAGTGCATTCTAGG-AAACTTCTGGGAAT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171732138 258 + 173848474 TTCCTTTGGATAGAGAATCTTCAGCGCATTCT-TTGctttggtgaattaccagaattctgaactggctcattttagttgttttgcaagtattttcactgttttcgttggaaagcaagctcactgagg-------tcTCGCGTTCCAGAAG-----CCAGTCTCTTTCAATGGTATTTGGTGATTGCTAATCTAGAGATAACAATTAGAAAACAAACCCAACCTGGTGTATT-----TAAAAAAATACTCAGTGCATTCTAGG-AAACTTCTGGGAAT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11416682 258 - 12463322 TTCCTTTGGATAGAGAATTTTCAGCGCAGTCT-TTGCTATGGTGAATTACCAGAATTCTGAACTGGCTTATTTTAGTTGTTTTGCAATTATTTTCACTGTTTTCGTTAGAAAGCAAGCTCACTGAGG-------TCTCGCGTTCCAGAAG-----CCAGTCTCTTTCAATGGTATTTGGTGATTGCTAATCTAGAGAGAACAATTAGAAAACAAACCCAACCTGGTGTATT-----TAAAAAAATACTCAGTGCATTCTAGG-AAACTTCTGGGAAT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156243304 254 + 157873769 TTCCTTTGGATGGAGAATTTTCAGCGCATTCT-TTGctttggtgaattaccagaattctgaactggcttattttagttgttttgcaagtattttcactgttttcgttggaaagcaagctcactgagg-------tctcgcactccAGAAG-----CCAGTCTCTTTCAGTGGTATTTGGCGATTGCTAATCTAGAGATAACAATTAGAAAACAAACCCAACCTGGTGTATT-----TAAAAAAAT----AGTGCATTCTAGG-AAACTTCTGGGAAT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170269588 259 + 172585720 TGCTTTCGGATAGAAAAGTTTCAGCTCATTCT-TTGCTTTGGTGAATTGCCAGAATTCTGAACTGGTGTATTTGAGTTGTTTTGCAAGTATTTTCACTGTTTTAGTTGGAAGGCAAGCTCACTGAGG-------CCTTGCGTTCCAGAAA-----CCAGTCTCTTCCAATGGTATTTGGCGATTGCTGGTCTAGACATAACAATTAGAAAAGAAGCCCAACCTGGTGCATT----AAAAAAAAATACTCAGTGCATTCTAGG-AAACTTCTGGGAAT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169015197 259 - 170955103 TGCTTTCGGATAGAAAAGTTTCAGCTCATTCT-TTGCTTTGGTGAATTGCCAGAATTCTGAACTGGTTTATTTGAGTTGTTTTGCAAGTATTTTCACTGTTTTAGTTGGAAAGCAAGCTCACTGAGG-------CCTTGCGTTCCAGAAG-----CCAGTCTCTTTCAATGGTATTTGGCGATTGCTAGTCTAGACATAACAATTAGAAAAGAAACCCAACCTGGTGTATT----AAAAAAAAATACTCAGTGCATTCTAGG-AAACTTCTGGGAAT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8302432 260 + 10161646 TGCTTTCGGATAGAAAAGTTTCAGCTCATTCT-TTGCTTTGGTGAATTGCCAGAATTCTGAACTGGTTTATTTTAGTTGTTTTGCAAGTATTTTCACTGTTTTAGTTGGAAAGCAAGCTCACTGAGG-------CCTTGCGTTCCAGAAG-----CCAGTCTCTTTCAATGGTATTTGGCGATTGCTAGTCTAGACATAACAATTAGAAAAGAAGCCCAACCTGGTATATT---AAAAAAAAAATACTCAGTGCATTCTAGG-AAACTTCTGGGAAT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1331898 263 + 3144229 TGCTTTCGGATAGAAAATTTTCAGCTCATTCT-TTGCTTTGGTGAGTTGCCAGAATTCTGAACTGGTTTATTTTAGTTGTTTTGCAAGTATTTTCACTGTTTTAGTTGGAAAGCAAGCTCACTGAGG-------CCTTGCGTTCCAGAAG-----CCAGTCTCTTTCAATGGTATTTGGCGATTGCTAGTCTAGAGATAACAATTAGAAAAGAAACCCAACCTGGTGTATTAAAAAAAAAAAAAAACTCAGTGCATTCTAGG-AAACTTCTGGGAAT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96611291 260 + 98384682 TGCTTTCGGATAGAAAAGTTTCAGCTCATTCT-TTGCTTTGGTGAATTGCCAGAATTCTGAACTGGTTTATTTTAGTTGTTTTGCAAGTATTTTCACTGTTTTAGTTGGAAAGCAAGCTCACTGAGG-------CCTTGTGTTCCAGAAA-----CCAGTCTCTTTCAATGGTATTTGGCGATTGCTAGTCTAGAGATAACAATTAGAAAAGAAACCCAATCTGGTGTATT---AAAAAAAAAATACTCAGTGCATTCTAGG-AAACTTCTGGGAAT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8154025 263 - 10857215 TGCTTTCGGATAGAAAATTTTCAGCTCATTCT-TTGCTTTGGTGAATTGCCAGAATTCTGAACTGGTTTATTTTAGTTGTTTTGCAAGTATTTTCACTGTTTTAGTTGGAAAGCAAGCTCACTGAGG-------CCTTGCGTTCCAGAAG-----CCAGTCTCTTTCAATGGTATTTGGCGATTGCTAGTCTAGAGATAACAATTAGAAAAGAAACCCAACCTGGTGTATTAAAAAAAAAAAAATACTCAGTGCATTCTAGG-AAACTTCTGGGAAT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15549989 261 - 23502949 TGCTTTCGGATAGAAAATTTTCAGCTCATTCT-TTGCTTTGGTGAATTGCCAGAATTCTGAACTGGTTTATTTTAGTTGTTTTGCAAGTATTTTCACTGTTTTAGTTGGAAAGCAAGCTCACTGAGG-------CCTTGCATTCCAGAAG-----TCAGTCTCTTTCAATGGTATTTGGTGATTGCTAGTCTAGAGAAAACAATTAGAAAAGAAACCCAATCTGGTGTATT--AAAAAAAAAAATACTCAGTGCATTCTAGG-AAACTTCTGGGAAT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169817328 260 + 171630274 TTCTTTTGGATAGAAAATTTTCAGCTCATTCT-TTGCTTTGGTGAACGGCCAGAATTCTGAACTGGTTTATTTTAGTTGCTTTGCAAGTATTTTCACTGTTTGAGTTGGA----AAGCTCACTGAGG-------TCTTGCATTCCAGAAGAATGTCTTGTCTCTTTCAGTGGTATTTGGCAGCTGCTAATCTAGAGATAACCATGAGAAAACAAACCCAACATGGTATATT----TTTAAAAAATACTCAGTGCATTCGAGG-AAACTTCTGGGAGT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1241848 258 - 2905041 ttcttttggatagaaaatttccagctcattct-ttgctttggtgaatggccagaattctgaactggtttattttagttgctttgcaagtgttttcattgttttagttggaaagcaagctcactgagg-------tcttgcattccAGAAG-----CCTGTCTCTGTCAATGGTATCTGGCAGCTGCTAATCTAGAGATAACCATTAGAAAAC-AACCCAACATGATATGTT----TTTAAAAAATACTCGGTGCATTCTAGG-AAACATCTGGGAAT i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1193917 259 - 2164891 ttcttttggatagaaaattttcagctcattct-ttgctttggtgaatggccagaattctgaactggtttattttagttgctttgcaagtattttcattgttttagttggaaagcaagctcactgagg-------tcttgcattccAGAAG-----CCTGTCTCTTTCAATGGTATTTAGCAGCTGCTAATCTAGAGATAACCATTAGAAAACAAACCCAACATGGTATATT----TTTAAAAAATACTCAGTGCATTCTAGG-AAACTTCTGGGAAT i cebCap1.NW_016107695v1 C 0 I 170 s aotNan1.NW_018494782v1 1430744 258 - 1813869 TTCTTTTGGATAGAAAATTTTCAGCTCATTCT-TTGCTTTGGTGAATGGCCAGAATTCTGAACTGGTTTGTTTTAGTTGCTTTGCAAGTATTTTCTTTGTTTTAGTTGGAAAGCAAGCTCACTGAGG-------TCTTACATTCCAGAAG-----CCTGTCTCTTTCAATGGTATTTGGCAGCTGCTAATCTAGAGATAACCATTAGAAAACAAACCCAACATGGTATA-T----TTTAAAAAATACTCAGTGCATTCTAGG-AAACTTCTGGGAAT i aotNan1.NW_018494782v1 C 0 C 0 s canFam3.chr1 56110341 257 + 122678785 ttctcgtagatagacaattttcagctcattctcttgctttgattaatcaccagaattccgaaatggtttattttaatcattttgccagtatttttattgttttggaggggaagcaagttcactgagacattcactctggcattccagaag-----ccaatct----cagcagtattttGTGATTACTCATCAAGAGACAACCATTAGGAGAA------AACATTGTGTGTT-----CAAAGTACCATTTAATGCATTATGGGAAAACTTCCGGGAAT i canFam3.chr1 I 343 C 0 e dasNov3.JH569188 483526 1638 + 760995 I a score=3626475.000000 s hg38.chr6_KB021644v2_alt 14001 425 + 185823 GTTATATTATTTAAAA-----TTT-ATATTATGCTGTAAACTGCAAAGAACATTATTTCCTTATAGTTTTGGGTGCATTGTCATTAATATATATGGAACAAAATAATCTGAAGATATTCTAA--TAT-ACATATATA--TTT--TTACTCATACACTATAATACTGAAAATAATAAATGAGGTACAATCATTTTACATACCTCATTATTGTTATTACTTCTTTTTAAAATAACCTCTTTGAGTTATTATT-CACAAATTGAAATGGGAGCATCAC-AAAAATCCTCAGAATTCTCTGG----AATTGCTCAGCTAGGGTGCTGCAAGCATCCACACTCTGGACTCACAGGACTTAATGGAAATCAGAGTAATTAAAACAAAG-ACATAAAACGACATTATCGATTAAGTGTAGCAGGG-AAAAAT-CGAACACTGCATATTGTGGCT s panTro5.chr6 173468554 425 + 175400573 GTTATATTATTTAAAA-----TTT-ATATTATGCTGTAAACTGCAAAGAACATTATTTCCTTATAGTTTTGAGTGCATTGTCATTAATATATATGGAACAAAATAATCTGAAGATATTCTAA--TAT-ACATATATA--TTT--TTACTCGTACACTATAATACTGAAAATAATAAATGAGGTACAATCATTTTACATACCTCATTATTGTTATTACTTCTTTTTAAAATAACCTCTTTGAGTTATTATT-CACAAATTGAAATGGGAGCATCAT-AAAAATCCTCAGAATTCTCTGG----AATTGCTCAGCTAGGGTGCTGCAAGCATCCACACTCTGGACTCACAGGACTTAATGGAAATCAGAGTAATTAAAACAAAG-ACATAAAACGACATTATCGATTAAGTGTAGCAGGG-AAAAAT-CGAACACTGCATATTGTAGCT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171732396 425 + 173848474 GTTATATTATTTAAAA-----TTT-ATATTATGCTGTAAACTGCAAAGAACATTATTTCCTTATAGTTTTGAGTGCATTGTCATTAATATATATGGAACAAAATAATCTGAAGATATTCTAA--TAT-ACATATATA--TTT--TTACTCGTACACTATAATACTGAAAATAATAAATGAGGTACAATCATTTTACATACCTCATTATTGTTATTACTTCTTTTTAAAATAACCTCTTTGAGTTATTATT-CACAAATTGAAATGGGAGCATCAT-AAAAATCCTCAGAATTCTCTGG----AATTGCTCAGCTAGGGTGCTGCAAGCATCCACACTCTGGACTCACAGGACTTAATGGAAATCAGAGTAATTAAAACAAAG-ACATAAAACGACATTATCGATTAAGTGTAGCAGGG-AAAAAT-CGAACACTGCATATTGTAGCT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11416940 423 - 12463322 GTTATATTATTTAAAA-----TTT-ATATTATGCTGTAAACTGCGAAGAATATTATTTCCTTATGGTTTTGGGTGCATTGTCATTAATATATATGGAACAAAATAATCTGAAAGTATTCTAA--TATAATATATATA--TTT--TTACTCATACACTATAATACTGAAAATAATAAATGAGGTACAACCATTTTACATACCTCATTATTGTTATTA---CTTTTTAAAATAACCTCTTTGAGTTATTATT-CACAAATTGAAATGGGAGCATCAT-AAAAATCCTCAGAATTCTCTGG----AATTGCTCAGCTAGGGTGCTGCAAGCATCCACACTCTGGACTCACAGGACTTAATGGAAATCAGAGTAATTAAAACAAAG-ACATAAAACGACATTATCGATTAAGTGTAGCAGGG-AAAAAT-CGAACACTGCATATTGTGGCT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156243558 428 + 157873769 GTTATATTATTTAAAATTTACTTT-ATATTATACTGTAAACTGCAAAGAACGTTATTTCCTTATAGTTTTGGGTGCATTGTCATTAATATATATGGAACAAAATAATCTGAAGGTATTCTAA--TAT-ACATATATA--TTT--TTACTCATATGCTATAATACTGAAAATAATAAATGAGGTACAATCATTTTACATACCTGATTATTGTTATTA---CTTTTTGAAATAACCTCTTTGAGTTATTATT-CACAATTTGAAATGGGAGCATCAT-ACAAATCCTCAGAATTCTCTGG----AATTGCTCAGTTAGGGTGCTGCAAGCATCCACACTCTGGACTCACAGGACTTGATGGAAATCAGAGTAATTAAAACAAAGTAATTAAAACGACATTATCGATTAAGTGTAGCAGGG-AAAAAA-TGAACACTGCATATTGTGGCT i nomLeu3.chr3 C 0 I 108 s rheMac8.chr4 170269847 428 + 172585720 GTTATATTATTTAAAATTTACTTT-ATATTATGCTGTAAACTGCAAAGAACATTATTTCCCTATGGTTTTGGGTGCATTGTCGTTAATATATATGGAACAAAATAATCTGAAGGTATTCTAA--TAT-ACATATATA--TTG--TTACTCATACACTATCATACTGAAAATAGTAAATGAGGTACACTCGTTTTACATACCTGATTATTGTTATTA---CTTTTTAAAATAACCTCTTTGAGTTATTATT-CACAAATTGAAAAGGGAGCATTAT-AAAAATCCTCAGAATTCTCTGG----AATGGCTGAGTTAGGGTGCTGCAAGCGTCCACACTCTGGACTCACAGGACTTAATGGAAATCAGAGCAATTAACACAAAG-ACATAAAATGAAAATATCGATTAAGTGTAGCAGGG-AAAAAAACTAACAGTGCATATTGTGGCT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169015456 428 - 170955103 GTTATATTATTTAAAATTTACTTT-ATATTATGCTGTAAACTGCAAAGAACATTATTTCCCTATGGTTTTGGGTGCATTGTCATTAATATATATGGAACAAAATAATCTGAAGGTATTCTAA--TAT-ACATATATA--TTG--TTACTCATACACTATCATACTGAAAATAGTAAATGAGGTACACTCGTTTTACATACCTGATTATTGTTATTA---CTTTTTAAAATAACCTCTTTGAGTTATTATT-CACAAATTGAAAAGGGAGCATTAT-AAAAATCCTCAGAATTCTCTGG----AATGGCTGAGTTAGGGTGCTGCAAGCGTCCACACTCTGGACTCACAGGACTTAATGGAAATCAGAGCAATTAACACAAAG-ACATAAAATGAAAATATCGATTAAGTGTAGCAGGG-AAAAAAACTAACAGTGCATATTGTGGCT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8302692 428 + 10161646 GTTATATTATTTAAAATTTACTTT-ATATTATGCTGTAAACTGCAAAGAACATTATTTCCCTATGGTTTTGGGTGCATTGTCATTAATATATATGGAACAAAATAATCTGAAGGTATTCTAA--TAT-ACATATATA--TTG--TTACTCATACACTATCATACTGAAAATAGTAAATGAGGTACACTCGTTTTACATACCTGATTATTGTTATTA---CTTTTTAAAATAATCTCTTTGAGTTATTATT-CACAAATTGAAAAGGGAGCATTAT-AAAAATCCTCAGAATTCTCTGG----AATGGCTGAGTTAGGGTGCTGCAAGCGTCCACACTCTGGACTCACAGGACTTAATGGAAATCAGAGCAATTAACACAAAG-ACATAAAATGAAAATATCGATTAAGTGTAGCAGGG-AAAAAAACTAACAGTGCATATTGTGGCT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1332161 428 + 3144229 GTTATATTATTTAAAATTTACTTT-ATATTATGCTGTAAACTGCAAAGAACATTATTTCCCTACGGTTTTGGGTGCATTGTCATTAATATATATGGAACAAAATAATCTGAAGGTATTCTAA--TAT-ACATATATA--TTG--TTACTCATACACTATCATACTGAAAATAATAAATGAGGTACAATCGTTTTACATACCTGATTATTGTTATTA---CTTTTTAAAATAACCTCTTTGAGTTATTATT-CACAAATTGAAAAGGGTGCATTAT-AAAAATCCTCAGAATTCTCTGG----AATGGCTCAGTTAGGGTGCTGCAAGCGTCCACACTCTGGACTCACAGGACTTAATGGAAATCAGAGCAATTAACACAAAG-ACATAAAATGAAAATATCGATTAAGTGTAGCAGGG-AAAAAAACTAACAGTGCCTATTGTGGCT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96611551 429 + 98384682 GTTATATTATTTAAAATTTAGTTT-ATATTATGCTGTAAACTGCAAAGAACATTATTTCCCTATGGTTTTAGGTGCATTGTCATTAATATATATGGAACAAAATAATCTGAAGGTATTCTAA--TAA-ACATATATA--TTG--TTACTCATACACTCTCATACTGAAAATAATAAATGAGGTACAATGATTTTACATACCTGATTATTGTTATTA---CTTTTTAAAATAACCTCTTTGAGTTATTATT-CACAAATTGAAATGGGAGCATTATAAAAAATCCTCAGAATTCTCTGG----AATGGCTCAGTTAGGGTGCTGCAAGCGTCCACACTCTGGACTCACAGGACTTAATGGAAATCAGAGCAGTTAAAACAAAG-ACATAAAATGACATTATCGATTAAGTGTAGCAGGG-AAAAAAACTAAAAGTGCATATTGTGGCT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8154288 428 - 10857215 GTTATATTATTTAAAATTTACTTT-ATATTATGCTGTAAACTGCAAAGAACATTATTTCCCTACGGTTTTGGGTACATTGTCATTAATATATATGGAACAAAATAATCTGAAGGTATTCTAA--TAT-ACATATATA--TTG--TTACTCATACACTATCATACTGAAAATAATAAATGAGGTACAATCGTTTTACATACCTGATTATTGTTATTA---CTTTTTAAAATAACCTCTTTGAGTTATTATT-CACAGATTGAAAAGGGTGCATTAT-AAAAATCCTCAGAATTCTCTGG----AATGGCTCAGTTAGGGTGCTGCAAGCGTCCACACTCTGGACTCACAGGACTTAATGGAAATCAGAGCAATTAACACAAAG-ACATAAAATGAAAATATCGATTAAGTGTAGCAGGG-AAAAAAACTAACAGTGCATATTGTGGCT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15550250 428 - 23502949 GTTATATTATTTAAAATTTACTTT-ATATTATGCTGTAAACTGCAAAGAACATTACTTCCCTATGGTTTTGGGTGCATTGTCATTAATATATATGGAACAAAATAACCTGAAGGTATTCTAA--TAA-ACATATACA--TAG--TTACTCATACACTATCATACTGAAAATAATAAATGAGGTACAATCATTTTACATACCTGATTATTGTTACTA---CTTTTTAAAATAACCTCTTTGAGTTATTATT-CACAAATTGAAATGGGAGCATTAT-AAAAATCCTCAGAATTCTCTGG----AATGGCTCAGTTAGGGTGCTGCAAGCGTCCACACTCTGGACTCACAGGACTTAATGGAAATCAGAGCAATTAAAACAAAG-ACATAAAATGACATCATCGATTAAGTGTAGCAGGG-AAAAAAGCTAACAGTGCATATTGTGGCT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169817588 420 + 171630274 TTTCTACTAATTGAAATTTGCTTT-GTATTATGCAGTAAACTGCAAAGAACATTATTTCCTTATAGATTTGAGTGCATTGTCATTAATGTATATGGAACAAACTGATCTGAAGGTATTCTAT--CAT-ACATATATA--TTT--TTCCTCGTACAACATAATACTGAAAATAATGAATGGGGTGCAATCATTTTACAAACCTGATTA---TTATTA---CTTTTTAAAATAACCTCTTTGAGTTATTACT-CACAAATTGAAATGGGAGCATCAT-AAAAACCCTCAGCATTCTGTGG----AATTGTTCAG-TAGGGTGTGCCAAGCAT--CCACCCCGAACTCACAGGACTTAATGGAAATCAGAGTAATTAAAACAAAG-ACATAAAATGACATTATCGATTAAATGTAGCAAGG-AGAGAA--CCGCATTGAATACCATGGCT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1242106 424 - 2905041 TTTCTGCTACTTAAAATTTACTGT-GTATTATGCTGTAAACTGCAAAGAACATTATTTCCTTATAGATTTGAGTGCATTGTCATTAATATATATGGAACAAACTAATCTGAAGGTATCCTAA--TAT-ACATATATATTTTT--TTTCTCATACAATGTAACACTTAAAATAATGAATGAGGTACAATCATTTTACAAACCTGATCA---TTATTA---CTTTTTAAAATAACCTCTTTGAGTGATTACT-CACAAATTGAAATGGCAGCATCAT-AAAAACCCTCAGAATTCTGTGG----AATTGTTCAG-TAGGGTGTGCCAAGCATACACACTCTGAACTCACAGGACTTAATGAAAATCAGAGTAATTAAAACAAAG-ACATAAAATGACATTATTGATTAAATGTAGCAAGG-AAAAAA--TCACATTGAATATTATGGCT i saiBol1.JH378287 C 0 C 0 s aotNan1.NW_018494782v1 1431002 427 - 1813869 TTTCTACGACTTAAGATTTACTTT-GTGTTATGCTGTAAACTGCAAAGAGCATTATTTCCTTATAGATTTGGGTGCATTGTCATTAATATATAGGGAACAAACTAATCTGAAGATATTCTAA--TAT-ACATATATA--TTT--TTTCTCACACAATGTAATACTGAAAATAAGGAATGAGGTACAATCATTTTACAAACCTGATCA---TAATTA---CTTTTTCAAATAACCTCTTTGAGTTATTCCT-CACAAATTGAAATGGGAGCATCAT-GAAAACCCTCAGAATTCTGTGGAATTAATTGTTCAG-TAGGGTGTGTCAAGCATCCACACTCCTAACTCACAGGACTTAATGGAAATCAGAGTAATTAAAACAAAG-ACATAAAATGACATTATCGATTAAATGTAGCAAGGAAAAAAA--TCACATTGAATATTACGGCC i aotNan1.NW_018494782v1 C 0 C 0 s canFam3.chr1 56110598 414 + 122678785 TTTGTATTATTTAAATTTTGCTTTCATATTATGCTGTAAACCTCAAAGAAAAAAAATT--TTATAGATTAAACT-CAATGTTATTAACATATGCATAATAAAGTGGGCTGAAAGGATTATAAGGCAC-ACATACATA--TTTCATTTCTTATACAACGGAATATTGAATGTAATAAA---AGTACA-CCATTT---GTAGCTGATTCTAATTAGTGCTGTTTTTTAAAAGGACATTTTTGAGTTATCATTAAATGAACTGGGAAGCAAGCTTCAT-GGGAAGCCTCAGCATTCCAGGG----ATTTACGCAGCCACAGCACTGAAAGCTTCCACACCCAGAACTTAGAGGACTTAATGAAAATCAGAACAATTAGAACAAAG-GAAGGAAACCACACTATCGAT------TAGCAGAG-CAATTTTTCAA------ATCCTGGGGC- i canFam3.chr1 C 0 C 0 e cebCap1.NW_016107695v1 1194176 170 - 2164891 I e dasNov3.JH569188 483526 1638 + 760995 I a score=3071788.000000 s hg38.chr6_KB021644v2_alt 14426 368 + 185823 TGAATGGTG-AAGTCTT-GCTGCAGCAGATGCTTTACTGACCTAACGGTATCCTCTCCGTTTTCCCAAGTGACATGCTTGTAGCTTCCTATGAAATAAAAAGCACTTGGGAA-AAGTTATATGGTCT-GGCTATGTGAATTATTAAGTTTGGAGCA-ACCAAGAACTCATAGACTTCTTCTGGGACATTCATTCAAATTAAATTTATATAGGTTTGAATAGTTGCAGAAAATTTCAATGTATCCATTATTGATA--TTTTTTGTGAAAAACCTTGAAACAAATAGAGTTTATATGTTAATACTTTACACATTCTTTTTAGATTTTTTAAATAGTGAATCAAAATATTCAACCTTCTTATGCCTTTTGTGTAATCT s panTro5.chr6 173468979 368 + 175400573 TGAATGGTG-AAGTCTT-GCTGCAGCAGATGCTTTACTGACCTAACGGTATCCGCTCCGTTTTCCCAAGTGACATGCTTGTAGCTTCCTATGAAATAAAAAGCACTTGGGAA-AAGTTATATGGTCT-GGCTATGTGAATTATTAAGTTTGGAGCA-ACCAAGAACTCATAGACTTCTTCTGGGACATTCATTCAAATTAAATTTATATAGGTTTGAATAGTTGCAGAAAATTTCAATGTATCCATTATTGATA--TTTTTTGTGAAAAACCTTGAAACAAATAGAGTTTATATGTTAATACTTTACACATTCTTTTTAGATTTATTAAATATTGAATCAAAATATTCAACCTTCTTATGCCTTTTGTGTAATCT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171732821 368 + 173848474 TGAATGGTG-AAGTCTT-GCTGCAGCAGATGCTTTACTGACCTAACGGTATCCGCTCCGTTTTCCCAAGTGACATGCTTGTAGCTTCCTATGAAATAAAAAGCACTTGGGAA-AAGTTATATGGTCT-GGCTATGTGAATTATTAAGTTTGGAGCA-ACCAAGAACTCATAGACTTCTTCTGGGACATTCATTCAAATTAAATTTATATAGGTTTGAATAGTTGCAGAAAATTTCAATGTATCCATTATTGATA--TTTTTTGTGAAAAACCTTGAAACAAATAGAGTTTATATGTTAATACTTTACACATTCTTTTTAGATTTATTAAATATTGAATCAAAATATTCAACCTTCTTATGCCTTTTGTGTAATCT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11417363 368 - 12463322 TGAATGGTG-AAGTCCT-GCTGCAGCAGATGCTTTACTGACCTAACGGTATCCGCTCCGTTTTCCCAAGTGACATGCTTGTAGCTTCCTATGAAATAAAAAGCACTTGGGAA-AAGTTATGTGGTCT-GGCTATGTGAATTATTAAGTTTGGAGCA-ACCAAGAACTCATAGACTTCTTCTGGGACATTCATTCAAATTAAATTTATATAGGTTTGAATAGTTGCAGAAATTTTCAATGTATTCATTATTGATA--TTTTTTGTGAAAAGCCTTGAAACAAATAGAGTTTATATGTTAATACTTTACACATTCTTTTTAGATTTTTTACATATTGAATCAAAATATTCAACCTTCTTATGCCTTTTGTGTAATCT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156244094 368 + 157873769 TGAATGGTG-AAGTCTT-GCTGCAGCAGATGCTTTACTGACCTAATGGTATCCTCTCCATTTTCCCAAGTGACATGCTTGCAGCTTCCTATGAAATAAAAAGCACTTGGGAA-AAGTTAGATGGTCT-GGTT-TGTGAATTATTAAGTTTGGAGCA-ACCAAGAACTCAAAGACTTCTTCTGGGACATTCATTCAAATTAAATTTATATAGGTTTGAATAGTTGCAGAAAATCTCAATGTATCCATTATTGATA-TTTTTTTGTGAAAAACCTTGAAACAAATAGAGTTTATATATTAATACTTTACACATTCTTTTTAGATTTTTTAAATATTGAATCAAAATATTCAACCTTCTTATGCCTTTGGTGTAATCT i nomLeu3.chr3 I 108 C 0 s rheMac8.chr4 170270275 368 + 172585720 TGAATGGTG-AAGTCTTCGCTGCAGCAGATG-TTTACTGACCTAACGTTATCCTCTCCGTTTTCCCAAGTGATGTACTTGTAGCTTCCCATGAAATAAAAAGCACTTGGGAA-AAGTTAGATGGTCG-GGCTATGTGAATTACTAAGTTTGGAGCA-ACCAGGAACTCATAGACTTCTTCTGGGACAATCATTCAAATTAAACTTATATGGGTTAGAATAGTTACAGAAAATCTCAGTGTATCCATTATTGACA--TTTTTTGTAAAAAACCTTGAAACAAATAGAGTTTACACATTAATACTTTACACATTCTTTTTAGATTTTTAAAATATTGAATCAAAATATTCAACCTTCTTATGTCTTTTGTGTAACCT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169015884 368 - 170955103 TGAATGGTG-AAGTCTTCGCTGCAGCAGATG-TTTACCGACCTAACGTTATCCTCTCCGTTTTCCCAAGTGATGTACTTGTAGCTTCCCATGAAATAAAAAGCACTTGGGAA-AAGTTAGATGGTCG-GGCTATGTGAATTACTAAGTTTGGAGCA-ACCAGGAACTCATAGACTTCTTCTGGGACAATCATTCAAATTAAACTTATATGGGTTAGAATAGTTACAGAAAATCTCAGTGTATCCATTATTGACA--TTTTTTGTAAAAAACCTTGAAACAAATAGAGTTTACACATTAATACTTTACACATTCTTTTTAGATTTTTTAAATATTGAATCAAAATATTCAACCTTCTTATGTCTTTTGTGTAACCT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8303120 368 + 10161646 TGAATGGTG-AAGTCTTCGCTGCAGCGGATG-TTTACCGACCTAACGTTATCCTCTCTGTTTTCCCAAGTGATGTACTTGTAGCTTCCCATGAAATAAAAAGCACTTGGGAA-AAGTTAGATGGTCG-GGCTATGTGAATTACTAAGTTTGGAGCA-ACCAGGAACTCATAGACTTCTTCTGGGACAATCATTCAAATTAAACTTATATGGGTTAGAATAGTTACAGAAAATCTCAGTGTATCCATTATTGACA--TTTTTTGTAAAAAACCTTGAAACAAATAGAGTTTACACATTAATACTTTACACGTTCTTTTTAGATTTTTTAAATATTGAATCAAAATATTCAACCTTCTTATGTCTTTTGTGTAACCT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1332589 367 + 3144229 TGAATGGTG-AAGTCTT-GCTGCAGCAGATG-TTTACCGACCTAACGTTATCCTCTCCGTTTTCCCAAGTGATGTGCTTGTAGCTTCCCATGAAATAAAAAGCACTTGGGAA-AAGTTAGATGGTCG-GGCTATGTGAATTACTAAGTTTGGAGCA-ACCAGGAACTCATAGACTTCTTCTGGGACAATCATTCAAATTAAACTTACATGGATTTGAATAGTTACAGAAAATCTCAGTGTATCCATTATTGATA--TTTTTTGTAAAAAACCTTGAAACAAATAGAGTTTACACGTTAATACTTTACACATTCTTTTCAGATTTTTTAAATATTGAATCAAAATATTCAACCTTCTTATGTCTTTTGTGTAACCT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96611980 368 + 98384682 TGAATGATG-AAGTCTT-GCGGCAGCAGATGCTTTACTGACCTAATGTTATCCTCTCCATTTTCCCAAGTGATGTGCTTGTAGCTTCCCATGAAAT-CAAAGCACTTGGGAA-AAGTTAGATGGCCG-GGCTATGTGAATTACTAAATTTGGAGCG-ACCAGGAACTCATAGACTTCTTCTGGGACATCCATTCAAATTAAATTTATATAGGTTTGAATAGTTACAGAAAATCTCAGTGTATCCATTATTGATA-TTTTTTTGTAAAAAACCTTGAAACAAATAGAGTTTACACATTAATACTTTACACATTCTTTTTAGATTTTTTAAATATTGAATCAAAATATTCAACCTTCTTATGCCTTTTGTGTAACCT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8154716 367 - 10857215 TGAATGGTG-AAGTCTT-GCTGCAGCAGATG-TTTACCGACCTAACGTTATCCTCTCCGTTTTCCCAAGTGATGTGCTTGTAGCTTCCCATGAAATAAAAAGCACTTGGGAA-AAGTTAGATGGTCG-GGCTATGTGAATTACTAAGTTTGGAGCA-ACCAGGAACTCATAGACTTCTTCTGGGACAATCATTCAAATTAAACTTATATGGGTTTGAATAGTTACAGAAAATCTCAGTGTATCCATTATTGATA--TTTTTTGTAAAAAACCTTGAAACAAATAGAGtttacacgttaacactttacacattctttttagattttTTAAATATTGAATCAAAATATTCTACCTTCTTATGTCTTTTGTGTAACCT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15550678 368 - 23502949 TGAATGGTG-AAGTCTT-GCTGCAGCAGATGCTTTACTGACCTAACGTTATCCTCTCCATTTTCCCAAGTGATGTGCTTGTAGCTTCCCATGAAATAAAAAGCACTTGGGAA-AAGTTAGATGGTCA-GGCTATGTGAATTATTAAGTTTGGAGCA-ACCAGGAATTCATAGACTTCTTCTGGGACATTCATTCAAATTAAATTTATACAGGTTTGAATAGTTTCAGAAAATCTCAGTGTATCCATTATTGATA--TTTTTTGTAAAAAACCTTGAAACAAATAGAGTTTACACATTAATACTTTACACATTCTTTTTAGATTTTTTAAATATTGAATCGAAATATTCAACCTTCTTATGCCTTTTGTGTAATCT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169818008 349 + 171630274 TGAATGGTG-GAGTCTT-CGTGCAGGAAATGCTTTGCAGACCTAACGTTGCCCTATCCATT-TTCCAAGTAACATGCT-GTGGG-TCCTATCAAATGCAAAGCCCTTGGG-A-AAGTGAGATGGTCT-GACTACGTGAATTCATAAGTTTGGTACA-ACCAAGGACTCAT--CCTTCTTCTGGGACATTCACTCAGACTGAGCTTAAATACGTTTCAATCATTACAGAAAATCTCGGGGTATCCATTATTGACA--TTTTTTGTAAAAAACTTTGAAATAAATATAGGTTACATATTAATA-------------TTTTAGATTTTTGAAATATTGAATCAAAATATTCAGCCTTTTAAAGGCTTTTGTGTAGTCT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1242530 364 - 2905041 TCAATGGTG-AAGTCTT-GGTGCAGGAAATGCTTTGCTGACCTAACATTACCATATCCATTGTTCCAAGTGACGTGCTCGTAGGTTCCTATCAAATAAAAAGCACTTGGG-A-AAGTTAGATGGTCT-GGCTATGTGAATTCTTAAGTTGGGCACA-ACCAAGGACTCATAGACTTCTTCTGGGACATTCATTAAAATTAAATTTAAATAGGTTTGAATCATTACAGAAAATCTCAGTGTATCCATTATTGACA--TTTT---TAAAAAACTTTGAAACAAATATAGTTTACATATTAATATTTTACACCTCCTTTTTAGATTTTTGAAATATTGAATCAAAATATGCAACCTTTTAAAGGCTTTTGTGTAATCT i saiBol1.JH378287 C 0 C 0 s aotNan1.NW_018494782v1 1431429 367 - 1813869 TGAATGGTG-AAGTCTT-CGTGCAGGAAATGCTTTGCTGATCTAACATTACCCTATCCATTTTTCCAAGTGACATGCTCGTAGGTTCCTATCAAAAAAAAAGCACTTGGG-A-ACGTTAGATGGTCT-GGCGATGTGAATTCTTAAGTTTGGCACA-ACCAAGGACTCATAGACTTCTTGTGGGACATTCGTTCAAATTAAATTTAAGTAGGTTTGAATCATTACAGAAAATCTCAGTGTATCCAATGTTGACA--TTTTTTGTAAAAAACTTTGAAACAAATATAGTTTACATATTAATATTTTACACATTCTTTTTAGATTTTTGAAATATTGAATCAAAATATTCAACCTTTTAAAGGCTTTTGTGTAATCT i aotNan1.NW_018494782v1 C 0 I 8994 s canFam3.chr1 56111012 346 + 122678785 AGAACAGTGAAAGTCAT-AGTCCGGTAGGTACTTTAAAGCTCTAACATTGTCTTACTCGTTTTTGTCAGTGAAATGTTTGTTGTTTCCTGTGAAATAAAAAACAGATGAAAAGAAGTCAGATGGTCTCAACTATGTGGATTATTAAGTCTGGAGTAGAGCAAGAA------------------------CATTGCAGCTAGCTCTATGCAGTTTTACAAAGTTGTGGAAAACCCCTGCGTATCTATCACTGACAGTTTTTTTATGGAAACCTTTGAATCAGATGTATCTTACACACAAATGCTTTACACGT---ATTTGGAATTTCC-CATCCTGGATGGACCCAGCCACCCTTCCTCTGCCTGTCACACAACAC i canFam3.chr1 C 0 C 0 e cebCap1.NW_016107695v1 1194176 170 - 2164891 I e dasNov3.JH569188 483526 1638 + 760995 I a score=256875.000000 s hg38.chr6_KB021644v2_alt 14794 44 + 185823 CAGAATAC----------------TTGCCTGGACTCTGCAGGGAGAGCCCAGAA----GTG--GCT s panTro5.chr6 173469347 44 + 175400573 CGGAATAC----------------TTGCCTGGACTCTGCAGGGAGAGCCCAGAA----CTG--GCT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171733189 44 + 173848474 CGGAATAC----------------TTGCCTGGACTCTGCAGGGAGAGCCCAGAA----CTG--GCT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11417731 44 - 12463322 CGGAATAC----------------TTGCCTGGACTCTGCAGGAAGAGCCCAGAA----CTG--GCT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156244462 44 + 157873769 CGGAATAC----------------TTGCCTGGACTCTGCAGGGAGAGCCCGGAA----CTG--GCT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170270643 45 + 172585720 CGGAAAAC----------------TTGCCTGGACCCCGCAGGGAGAGCCCGGAA----CTGT-GCT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169016252 45 - 170955103 CGGAAAAC----------------TTGCCTGGACCCCGCAGGGAGAGCCCGGAA----CTGT-GCT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8303488 45 + 10161646 CGGAAAAC----------------TTGCCTGGACCCCGCAGGGAGAGCCCGGAA----CTGT-GCT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1332956 45 + 3144229 CGGAAAAC----------------TTGCCTGGACTCTGCAGAGAGAGCCCGGAA----CTGT-GCT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96612348 45 + 98384682 TGGAATAC----------------TTGCCTGGACTCCGCAGGGAGAGCCTGGAA----CTGT-GCT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8155083 45 - 10857215 CGGAAAAC----------------TTGCCTGGACTCTGCAGAGAGAGCCCGGAA----CTGT-GCT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15551046 45 - 23502949 CGGAATAC----------------TTGCCAGGACTCCGCAGGGAGAGCCCGGAA----CTGT-GCT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169818357 46 + 171630274 GGGAATGT----------------TCGGGAGAGCTGTGGAGCAAGAGCCTGGGA----CTGTAGCT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1242894 46 - 2905041 GGGAATGT----------------TCGACAGGGCTGTGGAGGGACAGCCTGGGA----CTGCAGCT i saiBol1.JH378287 C 0 I 318 s canFam3.chr1 56111358 64 + 122678785 CAGCATCCTGAGAGTGGTGTGGGATGGTCCAGGCTCTGATATGAAGTCCAGGGGGCTCCTG--GTT i canFam3.chr1 C 0 C 0 e aotNan1.NW_018494782v1 1431796 8994 - 1813869 I e cebCap1.NW_016107695v1 1194176 170 - 2164891 I e dasNov3.JH569188 483526 1638 + 760995 I a score=147800.000000 s hg38.chr6_KB021644v2_alt 14838 25 + 185823 ------TCATGTTCTCTGACTTTGT-------GCTGCG s panTro5.chr6 173469391 25 + 175400573 ------TCATGCTCTCTGACTTTGT-------GCTGCG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171733233 25 + 173848474 ------TCATGCTCTCTGACTTTGT-------GCTGCG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11417775 25 - 12463322 ------TCATGTTCTCTGACTTTGT-------GCTGTG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156244506 25 + 157873769 ------TCATGTTCTCTGACTTTGT-------GATGTG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170270688 25 + 172585720 ------TCATGTTCCCTGACTTTGT-------GTTGCC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169016297 25 - 170955103 ------TCATGTTCCCTGACTTTGT-------GCTGCC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8303533 25 + 10161646 ------TCATGTTCCCTGACTTTGT-------GTTGCC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1333001 25 + 3144229 ------TCAAGTTCCCTGACTTTGT-------GCTGCC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96612393 25 + 98384682 ------TCGTGTTCTCTGACTTTGT-------GCTGCC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8155128 25 - 10857215 ------TCATGTTCCCTGACTTTGT-------GCTGCC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15551091 25 - 23502949 ------TCATGTTCTCTGACTTTGT-------GCTGCC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169818403 24 + 171630274 -------CCTGTGCTCTGAGGTTGT-------GCTGAG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1243258 25 - 2905041 ------TCACGTGCTCTGATGTTGT-------GTTGGC i saiBol1.JH378287 I 318 C 0 s canFam3.chr1 56111422 38 + 122678785 TGCTCAGCAGGCTCCCCTCCAATGCTAGGAGGGCTGTC i canFam3.chr1 C 0 C 0 e aotNan1.NW_018494782v1 1431796 8994 - 1813869 I e cebCap1.NW_016107695v1 1194176 170 - 2164891 I e dasNov3.JH569188 483526 1638 + 760995 I a score=44060.000000 s hg38.chr6_KB021644v2_alt 14863 5 + 185823 TTTTC s panTro5.chr6 173469416 5 + 175400573 TTTTC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171733258 5 + 173848474 TTTTC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11417800 5 - 12463322 TTTTC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156244531 5 + 157873769 TTTTC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170270713 5 + 172585720 TCTTC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169016322 5 - 170955103 TCTTC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8303558 5 + 10161646 TCTTC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1333026 5 + 3144229 TCTTC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96612418 5 + 98384682 TCTTC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8155153 5 - 10857215 TCTTC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15551116 5 - 23502949 TCTTC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169818427 5 + 171630274 TACTC i calJac3.chr4 C 0 I 1071 s saiBol1.JH378287 1243283 5 - 2905041 TTTTC i saiBol1.JH378287 C 0 C 0 s aotNan1.NW_018494782v1 1440790 5 - 1813869 TTTTC i aotNan1.NW_018494782v1 I 8994 C 0 s canFam3.chr1 56111460 5 + 122678785 TTTTC i canFam3.chr1 C 0 C 0 e cebCap1.NW_016107695v1 1194176 170 - 2164891 I e dasNov3.JH569188 483526 1638 + 760995 I a score=118772.000000 s hg38.chr6_KB021644v2_alt 14868 22 + 185823 AGCTGCAGATATGTCACAG-ATT s panTro5.chr6 173469421 22 + 175400573 GGATGCAGATATGTCACAG-ATT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171733263 22 + 173848474 GGCTGCAGATATGTCACAG-ATT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11417805 22 - 12463322 AGCTGCAGATATGTCACAG-ATT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156244536 22 + 157873769 AGCTGCGGATATGTCACGG-ATT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170270718 23 + 172585720 AGCTGCAGACAGGTCACAGAATT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169016327 23 - 170955103 AGCTGCAGACAGGTCACAGAATT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8303563 23 + 10161646 AGCTGCAGACAGGTCACAGAATT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1333031 23 + 3144229 CGCTGCAGACAGGTCACAGAATT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96612423 23 + 98384682 AGCTGCAGACATGTCACAGAATT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8155158 23 - 10857215 AGCTGCAGACAAGTCACAGAATT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15551121 23 - 23502949 AGCTGCAGACAGGTCACAGAATT i colAng1.NW_012114488v1 C 0 C 0 s saiBol1.JH378287 1243288 20 - 2905041 AGCTGCAGAT--ATCACAGAAT- i saiBol1.JH378287 C 0 I 1 s aotNan1.NW_018494782v1 1440795 20 - 1813869 AGCTGCAGAT--GTCACAGAAT- i aotNan1.NW_018494782v1 C 0 I 1 s canFam3.chr1 56111465 22 + 122678785 AGGCTCAGATGTTTCAGAGAAC- i canFam3.chr1 C 0 C 0 e cebCap1.NW_016107695v1 1194176 170 - 2164891 I e calJac3.chr4 169818432 1071 + 171630274 I e dasNov3.JH569188 483526 1638 + 760995 I a score=2987183.000000 s hg38.chr6_KB021644v2_alt 14890 349 + 185823 TTGG--TGAAAGTAATTCCTTTGGCACTTAATCAT--GCATTAGTAGATTTATATTGAAAGATTTTATTGCTGTTTAACTTCCCATATGTTTTCTTTTCTTTTTACTATCACTCTCAACTATATTGTGAGTACTTT-AAAGAC--AAAAAACAATATTATCCTCTAAAAAATAGTTCTATACTGGCCAGGACTTTGCCTTCTAATTAGTATAATGGCATTTATAA-ATGTTATTAAGTAAAACTTATGCAACTATCTAAGCAGTATCACCCTT---AATAAAGTAAAGTGAATCTGAGGTCCCAGAAGACTGGAAGAAAAA--------GAGAA-----CAAACTTA----AAC-----TAAAGCACAAAATGACTGCTTTA s panTro5.chr6 173469443 348 + 175400573 TTGG--TGAAAGTAATTCCTTTGGCACTTAATCAT--GCATTGGTAGATTTATATTGAAAGATTTTATTGCTGTTTAACTTCCCATATGTTTTCTTTTCTTTTTACTATCACTCTCCACCATATTGTGAGTACTTT-AAAGAC--AACAAACAATATTATCCTCTAAAAAATAGTTCTATACTGGCCAGGACTTTGCCTTCTAATTAGTATAATGGCATTTATAA-ATGTTATTAAGTAAAACTTATGCAACTATCTAAGCAGTATCACCCTT---AATAAAGTAAAGTGAATCTGAGGTCCCAGAAGACTGGAAGAAAAA--------GAGAA-----AAAAGTT-----CTC-----TAAAGCACAAAATGACTGCTTTA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171733285 348 + 173848474 TTGG--TGAAAGTAATTCCTTTGGCACTTAATCAT--GCATTGGTAGATTTATATTGAAATATTTTATTGCTGTTTAACTTCCCATATGTTTTCTTTTCTTTTTAATATCACTCTCAACCATATTGTGAGTACTTT-AAAGAC--AACAAACAATATTATCCTCTAAAAAATAGTTCTATACTGGCCAGGACTTTGCCTTCTAATTAGTATAATGGCATTTATAA-ATGTTATTAAGTAAAACTTATGCAACTATCTAAGCAGTATCACCCTT---AATAAAGTAAAGTGAATCTGAGGTCCCAGAAGACTGGAAGAAAAA--------GAGAA-----AAAAGTT-----CTC-----TAAAGCACAAAATGACTGCTTTA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11417827 348 - 12463322 TTGG--TGAAAGTAATTCCTTTGGCACTTAATCAT--GCATTGGTAGATTTATATTGAAAGATTTTATTGCTGTTTAACTTGCCATATGTTTTCTTTTCTTTTTACTATCACTCTCAACTATATTGTGAGTACTTT-AAAGAC--AAAAAACAATATTATCCTCTAAAAAATAGTTCTATACTGGCCAGGACTTTGCCTTCTAATTAGTATAATGGCATTTATAA-ATGTTATTAAGTAAAACTTATGCAACTATCTAAGCAGTATCACCCTT---AATAAAATAAAGTGAATCTGAGGTCCCAGAAGACTGGAAGAAAAA--------GAGAA-----TAAACTT-----AAC-----TAAAGCACAAAATGACTGCTTTA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156244558 354 + 157873769 TTGG--TGTAAATAATTCCTTTGGCACTTAATCAA--GCATTGGTAGACTTATATTGAAAGATTTTATTGCTGTTTAACTTCCCATATGTTTTCTTTTCTTTTTACTATCACTCTCAACTATATTGTGAGTACTTTAAAAGAC--AAAAAACAATATTATCCTCTAAAAAATAGTTCTATACTGGCCAGGACTTTGCCTTCTAATTAGTATAATGGCATTTATAA-ATGTTATTAAGTAAAACTTATGAAACTTTCTAAGCAGTTTTGCCCTT---AATAAAATAAAGCGAATCTGAGGTCCCTGAAGACTGGAAGAAAAG--------GAGAA-----TAAACTT-----AACTAAAGTAAAGCACAAAATGACTGCTTTA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170270741 348 + 172585720 TTGG--tgtcagtaattcctttggcacttaatcat--gcattggtagacttatattgaaatattttattgctgtttaacttcccatatgttttcttttctttttattgtcactctcaactatactgtgagtacttt-aaagac--agaaaacaatattatcctCTAAAAAATAGTTTTATACTGGCCAGGACTTTGCCTTCTAATTAGTATAATGGCATTTATAC-ATTTTATTAAGTAAAACTTATGCAACTTTCTAAGCAGTATCACCCTT---AAAAAAATAAAGTTAATCTGAGGTCCCTGAAGGCTGGAAGAAAAA--------GAGAA-----TGAACTG-----AGG-----TAAAGCACAAAATGACTGCTTTC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169016350 348 - 170955103 TTGG--TGTAAGTAATTCCTTTGGCACTTAATCAT--GCATTGGTAGACTTATATTGAAATATTTTATTGCTGTTTAACTTCCCATATGTTTTCTTTTCTTTTTATTGTCACTCTCAACTATACTGTGAGTACTTT-AAAGAC--AGAAAACAATATTATCCTCTAAAAAATAGTTTTATACTGGCCAGGACTTTGCCTTCTAATTAGTATAATGGCATTTATAC-ATTTTATTAAGTAAAACTTATGCAACTTTCTAAGCAGTATCACCCTT---AAAAAAATAAAGTTAATCTGAGGTCCCTGAAGGCTGGAAGAAAAA--------GAGAA-----TGAACTG-----AGG-----TAAAGCACAAAATGACTGCTTTC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8303586 348 + 10161646 CTGG--TGTAAGTAATTCCTTTGGCACTTAATCAT--GCATTGGTAGACTTAtattgaaatattttattgctgtttaacttcccatatgttttcttttctttttattgtcactctcaactatactgtgagtacttt-aaagac--agaaaacaatattatcctCTAAAAAATAGTTTTATACTGGCCAGGACTTTGCCTTCTAATTAGTATAATGGCATTTATAC-ATTTTATTAAGTAAAACTTATGCAGCTTTCTAAGCAGTATCACCCTT---AAAAAAATAAAGTTAATCTGAGGTCCCTGAAGGCTGGAAGAAAAA--------GAGAA-----TGAACTG-----AGG-----TAAAGCACAAAATGACTGCTTTC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1333054 348 + 3144229 TTGG--TGTAAGTAATTCCTTTGGCACTTAATCAT--GCATTGGTAGATTTACATTGAAATATTTTATTGCTGTTTAACTTCCCGTATGTTTTCTTTTCTTTTTATTGTCACTCTCAACTATACTGTGAGTACTTT-AAAGAC--AGAAAACAATATTATCCTCTAAAAAATAGTTTTATACTGGCCAGGACTTTGCCTTCTAATTACTATAATGGCATTTATAT-ATTTTATTAAGTAAAACTCATGCAACTTTCTAAGCAGTATCGCCCTT---AAAAAAATAAGGTTAATCTGGGGTCCCTGAAGGCTGGAAGAAAAA--------GAGAA-----TAAACTG-----AAG-----TAAAGCACAAAATGACTGCTTTC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96612446 353 + 98384682 TTGG--TGTAAGTAATTCCTTTGGCACTTAATCAT--GCATTGGTAGACTTATATTGAAATATTTTATTGCTATTTAACTTCCCATATGTTTTCTTTTCTTTTTATTGTCACTCTCAACTGTACTGTGAGTACTTT-AAAGAC--AAAAAACAATATTATCCTCTAAAAAATAGTTTTATACTGGCCAGGACTTTGCCTTCTAATTAGTATAATGGCATTTACAC-ATTTTATTAAGTAAAACTCATGCAACTTTCTAAGCAGTATCGCCCTT---AAAAAAATAAAGTTAATCTGGGGTCCCTGAAGGCTGGAAGAAAAA--------GAGAATAAACTAAACTG-----AAG-----TAAAGCACAAAATGACTGCTTTC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8155181 348 - 10857215 TTGG--TGTAAGTAATTCCTTTGGCACTTAATCAT--GCTTTGGTAGATTTATATTGAAACATTTTATTGCTGTTTAACTTCCCGTATGTTTTCTTTTCTTTTTATTGTCACTCTCAACTATACTGTGAGTACTTT-AAAGAC--AGAAAACAATATTATCCTCTAAAAAATAGTTTTATACTGGCCAGGACTTTGCCTTCTAATTACTATAATGGCATTTATAT-ATTTTATTAAGTAAAACTCATGCAACTTTCTAAGCAGTATCGCCCTT---AAAAAAATAAAGTTAATCTGGGGTCCCTGAAGGCTGGAAGAAAAA--------GAGAA-----TAAACTG-----AGG-----TAAAGCACAAAATGACTGCTTTC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15551144 350 - 23502949 TTGG--TGTAAGTAATTCCTTTGGCATTTAATCAT--GCATTGGTAGACTTATATTGAAATATTTTATTGCTGTTTAACTTCCCATATGTTTTCTTTTCTTTTTATTGTCACTCTCAACTATACTGTGAGTACTTT-AAAGACAAAAAAAACAATATTATCCTCTAAAAAATAGTTTTATACTGGCCAGGACTTTGCCTTCTAATTAGTATAATGGCATTTATAC-ATTTTATTAAGTAAAACTTATGCAACTTTCTAAGCAGTATCGCCCTT---AAAAAAATAAAGTTAATCTGGGGTCCCTGAAGCCTGGAAGAAAAA--------GAGAA-----TGAACTG-----AAG-----TAAAGTACAAAATGACTGCTTTC i colAng1.NW_012114488v1 C 0 C 0 s saiBol1.JH378287 1243309 350 - 2905041 TCGG--TGAAAGTCATTCATCTGGCAGTTAATCAT--ACACTGGTAGACTTATATTGAAAGATTTTATTGCTGTTTAATTTCCC--ATGTTTTCTTTTCTTTTTACTGTCACTCTCAACTATATTGTTGGTACTTT-GAAGAC--TAAAACCAATATTATTCTCACAAAAG-ACATTTATACTGGCCAGGACTTTGCCTTCTGATTAGTATAATAGCATTTATGA-ATTTTATTAAGTAAAATTTATGCAATTTTCTAAGCAGTATCACTCTT---AAAAAAATAAAGTTAATTTGAGGTCCTTGAAGGCTGGAAGAAAAA--------GAGAA-----TAAACCTAATTTAAC-----TAAAGCACAAAATGACTGTTTTC i saiBol1.JH378287 I 1 C 0 s cebCap1.NW_016107695v1 1194346 342 - 2164891 TTGG--TGAAAGTCATTCATTTGGCAGGTAATCAT--ACACTGGAAGACTTATATTGAAAGATTTTATTGCCGTTTAATTTCCCATATGTTTTCTTTTCTTTTTACTGTCACTCTCAACTATATTGTCAGTACTTT-GAAGAC--TAAAACCAATATTATCCTCGAAAAAG-ACATTTATACTGGCCAGGACTTTGCCTTCTGATTAGTATAATAGCA----------TTTATTAAGTAAAATTTATGCAAGTTTCTAAGCAGTATCACCCTC----AAAAAATAAAGTTAATTTGAAGTCCCTGAAGGCTGTAAGAAAAA--------CAGAA-----TGAACTTAATTTAAC-----TAAAGCACAAAATGACTGTTTTC i cebCap1.NW_016107695v1 I 170 C 0 s aotNan1.NW_018494782v1 1440816 350 - 1813869 TTGG--TGAAAGTCATTCACTTGGC-GTTAATCAT--ACACTGGTAGACTTAT-TTGAAAGACTTTATTGCTGTTTAATTTCCCATATGTTTTCTTTTCTTTTTACTATCACTCTCAACTATATTGTCAGTACTTT-GAAGAC--TGAAACCAATATTATCCTATAAAAAG-ACATTTATACTGGCCAGGACTTTGCCTTCTAATTAGTATAATAGCATTTATGA-ATTTTATTAAGTAAAATTTATGCAACTTTCTAAGCAGTATCACTCTT---AAAAAAATAAAGTTAATTTGATGTCCCTGAAGGCTGGAAGAAAAA--------GAGAA-----TAAACTTAATTTAAC-----TAAAGCACAAAATGACTATTTTC i aotNan1.NW_018494782v1 I 1 C 0 s canFam3.chr1 56111487 347 + 122678785 -TGGGCTCTATGTAATCCATTTGACACTTAATCACAGGCATCTG-GGACTTATATCGAAAAGCTTCA---CTATGTAACTTCCCACATTTCTGC----------ACTCTGTCCCGCAAGCACTCCGTGAGAACTTT-AAGGAC--AAAGA--GGTCTCACCCTTTAAAGACTAGCTCCCTGCTGGCCAGCTTCTTGCCTTCCAATCAACACAACAGTATTTCTGTGATTTGATTAAACAAAGGCTGTGCCATTTTCTAAGCAATATCATCCTGTTAAAAATAATAAAGTTAACCTGAGGTCCTGAAGGCTTGAAAGAAGAGAATGATCTGAAAA-----TTGACTC-----CAT-----GAAAGCTCAAAATGACTATTTTA i canFam3.chr1 C 0 C 0 e calJac3.chr4 169818432 1071 + 171630274 I e dasNov3.JH569188 483526 1638 + 760995 I a score=69234.000000 s hg38.chr6_KB021644v2_alt 15239 9 + 185823 CCTGAGTGT s panTro5.chr6 173469791 9 + 175400573 CCTGAGTGT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171733633 9 + 173848474 CCTGAGTGT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11418175 9 - 12463322 CCTGAGTGT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156244912 9 + 157873769 CCTGAGTGT i nomLeu3.chr3 C 0 I 3 s rheMac8.chr4 170271089 9 + 172585720 CCTGAGTAT i rheMac8.chr4 C 0 C 0 s macNem1.NW_012011000v1 8303934 9 + 10161646 CCTGAGTAT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1333402 9 + 3144229 CCTGAGTAT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96612799 9 + 98384682 CCTGAGTAT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8155529 9 - 10857215 CCTGAGTGT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15551494 9 - 23502949 CCTGAGTAT i colAng1.NW_012114488v1 C 0 C 0 s cebCap1.NW_016107695v1 1194688 9 - 2164891 CCTGAGTAT i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1441166 9 - 1813869 CCTGAGTAT i aotNan1.NW_018494782v1 C 0 C 0 s canFam3.chr1 56111834 9 + 122678785 CCTGAGAGT i canFam3.chr1 C 0 C 0 e saiBol1.JH378287 1243659 0 - 2905041 C e calJac3.chr4 169818432 1071 + 171630274 I e dasNov3.JH569188 483526 1638 + 760995 I e macFas5.chr4 169016698 0 - 170955103 C a score=17658.000000 s hg38.chr6_KB021644v2_alt 15248 3 + 185823 CAC s panTro5.chr6 173469800 3 + 175400573 CAC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171733642 3 + 173848474 CAC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11418184 3 - 12463322 CAT i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170271098 3 + 172585720 CAT i rheMac8.chr4 C 0 C 0 s macNem1.NW_012011000v1 8303943 3 + 10161646 CAT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1333411 3 + 3144229 CAT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96612808 3 + 98384682 CAT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8155538 3 - 10857215 CAT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15551503 3 - 23502949 CAC i colAng1.NW_012114488v1 C 0 C 0 s cebCap1.NW_016107695v1 1194697 3 - 2164891 CAT i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1441175 3 - 1813869 CAT i aotNan1.NW_018494782v1 C 0 C 0 s canFam3.chr1 56111843 3 + 122678785 CAT i canFam3.chr1 C 0 C 0 e saiBol1.JH378287 1243659 0 - 2905041 C e calJac3.chr4 169818432 1071 + 171630274 I e dasNov3.JH569188 483526 1638 + 760995 I e nomLeu3.chr3 156244921 3 + 157873769 I e macFas5.chr4 169016698 0 - 170955103 C a score=48295.000000 s hg38.chr6_KB021644v2_alt 15251 8 + 185823 TACTAAGG s panTro5.chr6 173469803 8 + 175400573 TACTAAGG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171733645 8 + 173848474 TACTAAGG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11418187 8 - 12463322 TACTAAGG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156244924 8 + 157873769 TACTAAAG i nomLeu3.chr3 I 3 C 0 s rheMac8.chr4 170271101 8 + 172585720 TACTAAGG i rheMac8.chr4 C 0 C 0 s macNem1.NW_012011000v1 8303946 8 + 10161646 TACTAAGG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1333414 8 + 3144229 TACTAAGG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96612811 8 + 98384682 TACTAAGG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8155541 8 - 10857215 TACTAAGG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15551506 8 - 23502949 TACTAAGG i colAng1.NW_012114488v1 C 0 C 0 s cebCap1.NW_016107695v1 1194700 8 - 2164891 TACTAAAG i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1441178 8 - 1813869 TGCTAAAG i aotNan1.NW_018494782v1 C 0 C 0 s canFam3.chr1 56111846 2 + 122678785 ----AA-- i canFam3.chr1 C 0 C 0 e saiBol1.JH378287 1243659 0 - 2905041 C e calJac3.chr4 169818432 1071 + 171630274 I e dasNov3.JH569188 483526 1638 + 760995 I e macFas5.chr4 169016698 0 - 170955103 C a score=75671.000000 s hg38.chr6_KB021644v2_alt 15259 36 + 185823 CCATCTCTGTTCTGTGGGTGGCGGTGTGGGATCTTC s panTro5.chr6 173469811 36 + 175400573 CCATCTCTGTTCTGTGGGTGGAGGTGTGGGATCTGC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171733653 36 + 173848474 CCATCTCTGTTCTGTGGGTGGCGGTGTGGGATCTGC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11418195 36 - 12463322 CCATCTCTGTTCTGTGGGTGGAGGTGTGGGATCTGC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156244932 36 + 157873769 CCATCTCTGTTCTGTTGGTGAAGGTGTGGGATCTGC i nomLeu3.chr3 C 0 C 0 s chlSab2.chr13 96612819 36 + 98384682 CCATTTCTCTTCTGTTGGTGTAGGTGTGGGATCTTC i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15551514 36 - 23502949 CCATTTCTCTTCTGTTGGTGGAGGTGGGGGATCTTC i colAng1.NW_012114488v1 C 0 C 0 s aotNan1.NW_018494782v1 1441186 36 - 1813869 CCATTTCTGTTCTGTTGATGGAGGTGTGGGATCTTC i aotNan1.NW_018494782v1 C 0 I 27 s canFam3.chr1 56111848 11 + 122678785 -----------------------GTGTGGGCTCT-- i canFam3.chr1 C 0 C 0 e saiBol1.JH378287 1243659 0 - 2905041 C e cebCap1.NW_016107695v1 1194708 0 - 2164891 C e calJac3.chr4 169818432 1071 + 171630274 I e dasNov3.JH569188 483526 1638 + 760995 I e cerAty1.NW_012002071v1 1333422 0 + 3144229 C e manLeu1.NW_012106474v1 8155549 0 - 10857215 C e macNem1.NW_012011000v1 8303954 0 + 10161646 C e rheMac8.chr4 170271109 0 + 172585720 C e macFas5.chr4 169016698 0 - 170955103 C a score=15939.000000 s hg38.chr6_KB021644v2_alt 15295 9 + 185823 TGCTTCAGA s panTro5.chr6 173469847 9 + 175400573 TGCTTCAGA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171733689 9 + 173848474 TGCTGCAAA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11418231 9 - 12463322 TGCTTCAGA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156244968 9 + 157873769 TGCTTCAGA i nomLeu3.chr3 C 0 C 0 s chlSab2.chr13 96612855 9 + 98384682 TGCTTCAGA i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15551550 9 - 23502949 TGCTTCAGA i colAng1.NW_012114488v1 C 0 C 0 e saiBol1.JH378287 1243659 0 - 2905041 C e aotNan1.NW_018494782v1 1441222 27 - 1813869 I e cebCap1.NW_016107695v1 1194708 0 - 2164891 C e calJac3.chr4 169818432 1071 + 171630274 I e dasNov3.JH569188 483526 1638 + 760995 I e canFam3.chr1 56111859 0 + 122678785 C e cerAty1.NW_012002071v1 1333422 0 + 3144229 C e manLeu1.NW_012106474v1 8155549 0 - 10857215 C e macNem1.NW_012011000v1 8303954 0 + 10161646 C e rheMac8.chr4 170271109 0 + 172585720 C e macFas5.chr4 169016698 0 - 170955103 C a score=2100.000000 s hg38.chr6_KB021644v2_alt 15304 1 + 185823 C s panTro5.chr6 173469856 1 + 175400573 C i panTro5.chr6 C 0 C 0 s panPan2.chr6 171733698 1 + 173848474 C i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11418240 1 - 12463322 C i gorGor5.CYUI01015032v1 C 0 C 0 s macFas5.chr4 169016698 1 - 170955103 C i macFas5.chr4 C 0 C 0 s chlSab2.chr13 96612864 1 + 98384682 C i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15551559 1 - 23502949 C i colAng1.NW_012114488v1 C 0 C 0 e saiBol1.JH378287 1243659 0 - 2905041 C e aotNan1.NW_018494782v1 1441222 27 - 1813869 I e cebCap1.NW_016107695v1 1194708 0 - 2164891 C e calJac3.chr4 169818432 1071 + 171630274 I e dasNov3.JH569188 483526 1638 + 760995 I e canFam3.chr1 56111859 0 + 122678785 C e cerAty1.NW_012002071v1 1333422 0 + 3144229 C e nomLeu3.chr3 156244977 0 + 157873769 C e manLeu1.NW_012106474v1 8155549 0 - 10857215 C e macNem1.NW_012011000v1 8303954 0 + 10161646 C e rheMac8.chr4 170271109 0 + 172585720 C a score=10805.000000 s hg38.chr6_KB021644v2_alt 15305 8 + 185823 CTGAGTGT s panTro5.chr6 173469857 8 + 175400573 CTGAGTGT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171733699 8 + 173848474 CTGAGTGT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11418241 8 - 12463322 CTGAGTGT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156244977 8 + 157873769 CTGAGTGT i nomLeu3.chr3 C 0 T 64 s macFas5.chr4 169016699 8 - 170955103 CTGAGTAT i macFas5.chr4 C 0 C 0 e saiBol1.JH378287 1243659 0 - 2905041 C e aotNan1.NW_018494782v1 1441222 27 - 1813869 I e cebCap1.NW_016107695v1 1194708 0 - 2164891 C e calJac3.chr4 169818432 1071 + 171630274 I e dasNov3.JH569188 483526 1638 + 760995 I e colAng1.NW_012114488v1 15551560 0 - 23502949 C e canFam3.chr1 56111859 0 + 122678785 C e chlSab2.chr13 96612865 0 + 98384682 C e cerAty1.NW_012002071v1 1333422 0 + 3144229 C e manLeu1.NW_012106474v1 8155549 0 - 10857215 C e macNem1.NW_012011000v1 8303954 0 + 10161646 C e rheMac8.chr4 170271109 0 + 172585720 C a score=30618.000000 s hg38.chr6_KB021644v2_alt 15313 24 + 185823 CATTACTAAGACCATCTCTGTTCT s panTro5.chr6 173469865 24 + 175400573 CATTACTAAGGCCATCTCTGTTCT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171733707 24 + 173848474 CATTACTAAGACCATCTCTGTTCT i panPan2.chr6 C 0 I 65 s gorGor5.CYUI01015032v1 11418249 24 - 12463322 CATTACTAAGGCCATCTCTGTTCT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156244921 24 + 157873769 CATTACTAAAGCCATCTCTGTTCT i nomLeu3.chr3 T 64 C 0 s macFas5.chr4 169016707 24 - 170955103 CATTACTAAGGCCATTTCTCTTCT i macFas5.chr4 C 0 C 0 e saiBol1.JH378287 1243659 0 - 2905041 C e aotNan1.NW_018494782v1 1441222 27 - 1813869 I e cebCap1.NW_016107695v1 1194708 0 - 2164891 C e calJac3.chr4 169818432 1071 + 171630274 I e dasNov3.JH569188 483526 1638 + 760995 I e colAng1.NW_012114488v1 15551560 0 - 23502949 C e canFam3.chr1 56111859 0 + 122678785 C e chlSab2.chr13 96612865 0 + 98384682 C e cerAty1.NW_012002071v1 1333422 0 + 3144229 C e manLeu1.NW_012106474v1 8155549 0 - 10857215 C e macNem1.NW_012011000v1 8303954 0 + 10161646 C e rheMac8.chr4 170271109 0 + 172585720 C a score=37684.000000 s hg38.chr6_KB021644v2_alt 15337 31 + 185823 CTTGGTGGCGATGTGGGATCTTCTGCTTCAG s panTro5.chr6 173469889 31 + 175400573 CTTGGTGGCGGTGTGGGATCTTCTGCTTCAG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171733796 31 + 173848474 GTGGGTGGCGGTGTGGGATCTGCTGCTTCAG i panPan2.chr6 I 65 T 195 s gorGor5.CYUI01015032v1 11418273 31 - 12463322 CTTGGTGGCGTTGTGGGATCTTCTGCTTTAG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156244945 31 + 157873769 GTTGGTGAAGGTGTGGGATCTGCTGCTTCAG i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169016731 31 - 170955103 GTTGGTGGAGGTGTAGGATCTTCTGCTTCAG i macFas5.chr4 C 0 C 0 s canFam3.chr1 56111859 13 + 122678785 ------------------TCTTCTGCTCCAG i canFam3.chr1 C 0 C 0 e saiBol1.JH378287 1243659 0 - 2905041 C e aotNan1.NW_018494782v1 1441222 27 - 1813869 I e cebCap1.NW_016107695v1 1194708 0 - 2164891 C e calJac3.chr4 169818432 1071 + 171630274 I e dasNov3.JH569188 483526 1638 + 760995 I e colAng1.NW_012114488v1 15551560 0 - 23502949 C e chlSab2.chr13 96612865 0 + 98384682 C e cerAty1.NW_012002071v1 1333422 0 + 3144229 C e manLeu1.NW_012106474v1 8155549 0 - 10857215 C e macNem1.NW_012011000v1 8303954 0 + 10161646 C e rheMac8.chr4 170271109 0 + 172585720 C a score=1365.000000 s hg38.chr6_KB021644v2_alt 15368 1 + 185823 A s panTro5.chr6 173469920 1 + 175400573 A i panTro5.chr6 C 0 C 0 s panPan2.chr6 171733632 1 + 173848474 A i panPan2.chr6 T 195 C 0 s gorGor5.CYUI01015032v1 11418304 1 - 12463322 A i gorGor5.CYUI01015032v1 C 0 C 0 s macFas5.chr4 169016762 1 - 170955103 A i macFas5.chr4 C 0 T 65 s canFam3.chr1 56111872 1 + 122678785 A i canFam3.chr1 C 0 C 0 e saiBol1.JH378287 1243659 0 - 2905041 C e aotNan1.NW_018494782v1 1441222 27 - 1813869 I e cebCap1.NW_016107695v1 1194708 0 - 2164891 C e calJac3.chr4 169818432 1071 + 171630274 I e dasNov3.JH569188 483526 1638 + 760995 I e colAng1.NW_012114488v1 15551560 0 - 23502949 C e chlSab2.chr13 96612865 0 + 98384682 C e cerAty1.NW_012002071v1 1333422 0 + 3144229 C e nomLeu3.chr3 156244976 0 + 157873769 C e manLeu1.NW_012106474v1 8155549 0 - 10857215 C e macNem1.NW_012011000v1 8303954 0 + 10161646 C e rheMac8.chr4 170271109 0 + 172585720 C a score=26903.000000 s hg38.chr6_KB021644v2_alt 15369 20 + 185823 CCTGAGTGTCATTACTAAGG s panTro5.chr6 173469921 20 + 175400573 CCTGAGTGTCATTACTAAGG i panTro5.chr6 C 0 I 13414 s panPan2.chr6 171733633 20 + 173848474 CCTGAGTGTCACTACTAAGG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11418305 20 - 12463322 CTTCAGTGTCATTACTAAGA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156244976 20 + 157873769 ACTGAGTGTCATTACTAAGG i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169016698 20 - 170955103 CCTGAGTATCATTACTAAGG i macFas5.chr4 T 65 C 0 s saiBol1.JH378287 1243659 20 - 2905041 CCTGAGTATCGTTACTAAAG i saiBol1.JH378287 C 0 C 0 s canFam3.chr1 56111873 2 + 122678785 --------TC---------- i canFam3.chr1 C 0 C 0 e aotNan1.NW_018494782v1 1441222 27 - 1813869 I e cebCap1.NW_016107695v1 1194708 0 - 2164891 C e calJac3.chr4 169818432 1071 + 171630274 I e dasNov3.JH569188 483526 1638 + 760995 I e colAng1.NW_012114488v1 15551560 0 - 23502949 C e chlSab2.chr13 96612865 0 + 98384682 C e cerAty1.NW_012002071v1 1333422 0 + 3144229 C e manLeu1.NW_012106474v1 8155549 0 - 10857215 C e macNem1.NW_012011000v1 8303954 0 + 10161646 C e rheMac8.chr4 170271109 0 + 172585720 C a score=23308.000000 s hg38.chr6_KB021644v2_alt 15389 13 + 185823 CCATCTCTGTTCT s panTro5.chr6 173483355 13 + 175400573 CCATCTCTGTTCT i panTro5.chr6 I 13414 C 0 s panPan2.chr6 171733653 13 + 173848474 CCATCTCTGTTCT i panPan2.chr6 C 0 I 65 s gorGor5.CYUI01015032v1 11418325 13 - 12463322 CCATCTCTGTTCT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156244996 13 + 157873769 CCATCTCTGTTCT i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169016718 13 - 170955103 CCATTTCTCTTCT i macFas5.chr4 C 0 C 0 s saiBol1.JH378287 1243679 13 - 2905041 CCATTTCTGTTCT i saiBol1.JH378287 C 0 C 0 e aotNan1.NW_018494782v1 1441222 27 - 1813869 I e cebCap1.NW_016107695v1 1194708 0 - 2164891 C e calJac3.chr4 169818432 1071 + 171630274 I e dasNov3.JH569188 483526 1638 + 760995 I e colAng1.NW_012114488v1 15551560 0 - 23502949 C e canFam3.chr1 56111875 0 + 122678785 C e chlSab2.chr13 96612865 0 + 98384682 C e cerAty1.NW_012002071v1 1333422 0 + 3144229 C e manLeu1.NW_012106474v1 8155549 0 - 10857215 C e macNem1.NW_012011000v1 8303954 0 + 10161646 C e rheMac8.chr4 170271109 0 + 172585720 C a score=14943.000000 s hg38.chr6_KB021644v2_alt 15402 10 + 185823 GTGGGTGGAG s panTro5.chr6 173483368 10 + 175400573 GTGGGTGGAG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171733731 10 + 173848474 GTGGGTGGAG i panPan2.chr6 I 65 C 0 s gorGor5.CYUI01015032v1 11418338 10 - 12463322 CTTGGTGGAG i gorGor5.CYUI01015032v1 C 0 I 521 s nomLeu3.chr3 156245009 10 + 157873769 GTTGGTGGAG i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169016731 10 - 170955103 GTTGGTGGAG i macFas5.chr4 C 0 C 0 s saiBol1.JH378287 1243692 10 - 2905041 GCTGGTAGAG i saiBol1.JH378287 C 0 C 0 e aotNan1.NW_018494782v1 1441222 27 - 1813869 I e cebCap1.NW_016107695v1 1194708 0 - 2164891 C e calJac3.chr4 169818432 1071 + 171630274 I e dasNov3.JH569188 483526 1638 + 760995 I e colAng1.NW_012114488v1 15551560 0 - 23502949 C e canFam3.chr1 56111875 0 + 122678785 C e chlSab2.chr13 96612865 0 + 98384682 C e cerAty1.NW_012002071v1 1333422 0 + 3144229 C e manLeu1.NW_012106474v1 8155549 0 - 10857215 C e macNem1.NW_012011000v1 8303954 0 + 10161646 C e rheMac8.chr4 170271109 0 + 172585720 C a score=34359.000000 s hg38.chr6_KB021644v2_alt 15412 22 + 185823 GTGTGGGATCTTCTGCTGCAGA s panTro5.chr6 173483378 22 + 175400573 GTGTGCGATCTGCTGCTTCAGA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171733741 22 + 173848474 GTGTGCGATCTGCTGCTTCAGA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11418869 22 - 12463322 GTGTGGGATCTGCTGCTTCAGA i gorGor5.CYUI01015032v1 I 521 C 0 s nomLeu3.chr3 156245019 22 + 157873769 GTGTGGGATCTGCTGCTTTAGA i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169016741 22 - 170955103 GTGTAGGATCTTCTGCTTCAGA i macFas5.chr4 C 0 T 65 s saiBol1.JH378287 1243702 22 - 2905041 GTGTGGGATCTTCCATTTCAGA i saiBol1.JH378287 C 0 T 65 e aotNan1.NW_018494782v1 1441222 27 - 1813869 I e cebCap1.NW_016107695v1 1194708 0 - 2164891 C e calJac3.chr4 169818432 1071 + 171630274 I e dasNov3.JH569188 483526 1638 + 760995 I e colAng1.NW_012114488v1 15551560 0 - 23502949 C e canFam3.chr1 56111875 0 + 122678785 C e chlSab2.chr13 96612865 0 + 98384682 C e cerAty1.NW_012002071v1 1333422 0 + 3144229 C e manLeu1.NW_012106474v1 8155549 0 - 10857215 C e macNem1.NW_012011000v1 8303954 0 + 10161646 C e rheMac8.chr4 170271109 0 + 172585720 C a score=34402.000000 s hg38.chr6_KB021644v2_alt 15434 20 + 185823 CCTGAGTGTCATTACTAAGA s panTro5.chr6 173483400 20 + 175400573 CCTGAGTGTCATTACTAAGG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171733763 20 + 173848474 CCTGAGTGTCATTACTAAGG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11418891 20 - 12463322 CCTGAGTGTCATTACTAAGA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156245041 19 + 157873769 -CTGAGTGTCATTACTAAGG i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169016698 20 - 170955103 CCTGAGTATCATTACTAAGG i macFas5.chr4 T 65 C 0 s saiBol1.JH378287 1243659 20 - 2905041 CCTGAGTATCGTTACTAAAG i saiBol1.JH378287 T 65 C 0 s canFam3.chr1 56111875 14 + 122678785 CCTGAGTGCTGTGT------ i canFam3.chr1 C 0 C 0 e aotNan1.NW_018494782v1 1441222 27 - 1813869 I e cebCap1.NW_016107695v1 1194708 0 - 2164891 C e calJac3.chr4 169818432 1071 + 171630274 I e dasNov3.JH569188 483526 1638 + 760995 I e colAng1.NW_012114488v1 15551560 0 - 23502949 C e chlSab2.chr13 96612865 0 + 98384682 C e cerAty1.NW_012002071v1 1333422 0 + 3144229 C e manLeu1.NW_012106474v1 8155549 0 - 10857215 C e macNem1.NW_012011000v1 8303954 0 + 10161646 C e rheMac8.chr4 170271109 0 + 172585720 C a score=116936.000000 s hg38.chr6_KB021644v2_alt 15454 23 + 185823 CCATCTCTGTTCTGTGGGTGGAG s panTro5.chr6 173483420 23 + 175400573 CCATCTCTGTTCTGTGGGTGGCG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171733783 23 + 173848474 CCATCTCTGTTCTGTGGGTGGCG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11418911 23 - 12463322 CCATCTCTGTTCTGTGGGTGGAG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156245060 23 + 157873769 CCATCTCTGTTCTGTTGGTGGAG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170271109 23 + 172585720 CCATTTCTCTTCTGTTGGTGGAG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169016718 23 - 170955103 CCATTTCTCTTCTGTTGGTGGAG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8303954 23 + 10161646 CCATTTCTCTTCTGTTGGTGGAG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1333422 23 + 3144229 CCATTTCTCTTCTGTTGGTGGAG i cerAty1.NW_012002071v1 C 0 C 0 s manLeu1.NW_012106474v1 8155549 23 - 10857215 CCATTTCTCTTCTGTTGGTGGAG i manLeu1.NW_012106474v1 C 0 C 0 s saiBol1.JH378287 1243679 23 - 2905041 CCATTTCTGTTCTGCTGGTAGAG i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1194708 23 - 2164891 CCATTTCTGTTCTGTTGGTGGAG i cebCap1.NW_016107695v1 C 0 C 0 s canFam3.chr1 56111889 18 + 122678785 CTACCTATGTTTCAGGGG----- i canFam3.chr1 C 0 C 0 e aotNan1.NW_018494782v1 1441222 27 - 1813869 I e calJac3.chr4 169818432 1071 + 171630274 I e dasNov3.JH569188 483526 1638 + 760995 I e colAng1.NW_012114488v1 15551560 0 - 23502949 C e chlSab2.chr13 96612865 0 + 98384682 C a score=132575.000000 s hg38.chr6_KB021644v2_alt 15477 23 + 185823 GTGTGGGATCTGCTGCTTCAGAG s panTro5.chr6 173483443 23 + 175400573 GTGTGGGATCTGCTGCTTCAGAG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171733806 23 + 173848474 GTGTGGGATCTGCTGCTTCAGAG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11418934 23 - 12463322 GTGCGGGATCTGCTGCTTCAGAG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156245083 23 + 157873769 GTGTGGGATCTGCTGCTTCAGAG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170271132 23 + 172585720 GTGTAGGATCTTCTGCTTCAGAT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169016741 23 - 170955103 GTGTAGGATCTTCTGCTTCAGAT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8303977 23 + 10161646 GTGTAGGATCTTCTGCTTCAGAT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1333445 23 + 3144229 GTGTGGGGTCTTCTGCTTCAGAT i cerAty1.NW_012002071v1 C 0 C 0 s manLeu1.NW_012106474v1 8155572 23 - 10857215 GTGTGGGGTCTTCTGCTTCAGAT i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169819503 23 + 171630274 GTGTGGGATCTTCCATTTCAGAG i calJac3.chr4 I 1071 C 0 s saiBol1.JH378287 1243702 23 - 2905041 GTGTGGGATCTTCCATTTCAGAG i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1194731 23 - 2164891 GTGTGGGATCTTCCATTTGAGAG i cebCap1.NW_016107695v1 C 0 C 0 e aotNan1.NW_018494782v1 1441222 27 - 1813869 I e dasNov3.JH569188 483526 1638 + 760995 I e colAng1.NW_012114488v1 15551560 0 - 23502949 C e canFam3.chr1 56111907 0 + 122678785 C e chlSab2.chr13 96612865 0 + 98384682 C a score=360315.000000 s hg38.chr6_KB021644v2_alt 15500 46 + 185823 ACTTTCGCATTACTTTCCATATAGTACTTTTATATAATTGATTCTT s panTro5.chr6 173483466 46 + 175400573 ACTTTCGCATTACTCTCCATATAGTACTTTTATATAATTGATTCTT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171733829 46 + 173848474 ACTTTCGCATTACTCTCCATATAGTACTTTTATATAATTGATTCTT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11418957 46 - 12463322 ACTTTTGCATTACTTTCCATATAGTACTTTTATATAATTGATTCTT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156245106 46 + 157873769 ACTTTAGCATTACTTTCCATATAGCACTTTTATATAATTGATTCTA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170271155 46 + 172585720 ACTTTAGCATTCCTTTCCATGTAGCATTTTTACATAATTGATTCTA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169016764 46 - 170955103 ACTTTAGCATTCCTTTCCATGTAGCATTTTTACATAATTGATTCTA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8304000 46 + 10161646 ACTTTAGCATTCCTTTCCATGTAGCATTTTTACATAATTGATTCTA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1333468 46 + 3144229 ACTTTAGCATTCCTTTCCATGTAGCATTTTTACATAATTGATTCTA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96612865 46 + 98384682 ACTTTAGCATTCCTTTCCATGTAGCATTTTTACATAATTGATTCTA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8155595 46 - 10857215 ACTTTAGCATTCCTTTCCATGTAGCATTTTTACATAGTTGATTCTA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15551560 46 - 23502949 ACTTTAGCATTACTTTCCATGTAGCATTTTTACATAATTGATTCTA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169819526 46 + 171630274 ACTTCAGCATTAATTTCCATGTAACACTTTTAAGTAATTGATTCTA i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1243725 46 - 2905041 ACTTTAGCATTATTTTCCATATAGCACTTTTATGTAATTGATTCTA i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1194754 46 - 2164891 ACTTTAGCATTATTTTCCATTTAGCACTTTTATGTAATTGATTCTA i cebCap1.NW_016107695v1 C 0 C 0 s canFam3.chr1 56111907 10 + 122678785 ------------------------------------ACAGATTTTA i canFam3.chr1 C 0 C 0 e aotNan1.NW_018494782v1 1441222 27 - 1813869 I e dasNov3.JH569188 483526 1638 + 760995 I a score=3765964.000000 s hg38.chr6_KB021644v2_alt 15546 397 + 185823 CATATTGAAGTTATTTATGTGGATTTAAATGTTAAAATTGAATTATGA---ATTTTATTTCTTAGGTTGCGATGTTTTAATGCTTCA-TTTTTTAA-TCTGTAAAACGTTTAGGATTTAACACCTAAAGTGAGTTTCATCCTTG--------------TGTTGTTTTGTTTTAAGTTTCATTATTTCCCTTTAAGGAA-AAATGTAGTTTACATTTCGCTTTGGTGGT-----TACAAAGCACAAAGCATGCCTCTAAACCGTAAGTAAATTAACAGTAAGAAATCCAAGA-----------------AAACCCAGCAAGGATGGTAAAGGCATTGCAAAAGTG----TAGGGAAAGTCAGTGTAACGACACCATGATGGCCATTTCTAGATGAAACATATTTTAGCTCTTTCTTTTTAATTTATTCTCTGCTGAA-AAACATA s panTro5.chr6 173483512 397 + 175400573 CATATTGAAGTTATTTATGTGGATTTAAATGTTAAAATTGAATTATGA---ATTTTATTTCTTAGGTTGTGATGTTTTAATGCTTCA-TTTTTTAA-TCTGTAAAACGTTTAGGATTTAACACCTAAAGTGAGTTTCATCCTTG--------------TGTTGTTTTGTTTTAAGTTTCATTATTTCCCTTTAAGGAA-AAATGTAGTTTACATTTCGCTTTGGTGGT-----TACAAAGCACAAAGCATGCCTCTAAACCATAAGTAAATTAACAGTAAGAAATCCAAGA-----------------AAACCCAGCAAGGATGGTAAAGGCATTGCAAAAGTG----TAGGGAAAATCAGTGTAACGACACCATGATGGCCATTTCTAGATGAAACATATTTTAGGTCTTTCTTTTTAATTTATTCTCTGCTGAA-AAACATA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171733875 397 + 173848474 CATATTGAAGTTATTTATGTGGATTTAAATGTTAAAATTGAATTATGA---ATTTTATTTCTTAGGTTGTGATGTTTTAATGCTTCA-TTTTTTAA-TCTGTAAAACGTTTAGGATTTAACACCTAAAGTGAGTTTCATCCTTG--------------TGTTGTTTTGTTTTAAGTTTCATTATTTCCCTTTAAGGAA-AAATGTAGTTTACATTTCGCTTTGGTGGT-----TACAAAGCACAAAGCATGCCTCTAAACCATAAGTAAATTAACAGTAAGAAATCCAAGA-----------------AAACCCAGCAAGGATGGTAAAGGCATTGCAGAAGTG----TAGGGAAAATCAGTGTAACGACACCATGATGGCCATTTCTAGATGAAACATATTTTAGGTCTTTCTTTTTAATTTATTCTCTGCTGAA-AAACATA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11419003 397 - 12463322 CATATTGAAGTTATTTATGTGGATTTAAATGTTAAAATTGAATTATGA---ATTTTATTTCTTAGGTTGTGATGTTTTAATGCTTCA-CTTTTTAA-TCAGTAAAACGTTTAGGATTTAACACCTAAAGTGAGTTTCATCCTTG--------------TGTTGTTTTGTCTTAAGTTTCATTATTTCCCTTTAAGGAA-AAATGTAGTTTACATTTCGCTTTGGTGGT-----TACAAAGCACAAAGCATGCCTCTAAACCATAAGTAAATTAACAGTAAGAAATCCAAGA-----------------AAACCCAGCAAGGATGGTAAAGGCATTGCAAAAGTG----TAGGGAAAATCAGTGTAACGACACCATGATGGCCATTTCTAGATGAAACATATTTTAGGTCTTTCTTTTTAATTTATTCTCTGCTGAA-AAACATA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156245152 390 + 157873769 CATATTGAAGTTATTTATGAGGATTTAAATGTTAAAATTGAATTATGA---ATTTTATTTCTTAGCTAGTGACGTTTTAATGCTTCA-TTTTTTAA-TCAGTAAAACGTTTAGGATTTAACACCTAAAGTGGGTTTCATTCTTC--------------TGTTGTTTTGTTTTAAGTTTCATTATTTCCCTGTAAGGAA-AAATGTAGTTTACATTTCACTTTGGTGGT-----TACAAAGCACAAAGCATGCCTCAAAACCATGAGTAAATGAACAGTAAGAAATCCAAGA-----------------AAACCCAGCAAAGATTGTAAAG-----GCAAAAGTG----TGGGGAAA-TCAGTGTAATGACAACATGATGGCCATGTCTAGATGAAACGTATTTTAGGTCTTTC-TTTTAATTTATTCTCTGGTGAA-AAACATA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170271201 396 + 172585720 CATTTTGAAGTGATTTATGTGCATTTAAATGTTAAAATTGAATTATGA---ATTTTATTTCTTAGCTAGTGACGTTTTAATGCTTCA-TTTTTTAATTCAGTAAAATGTTTAGGATTTAACACCTAAAGTGGGTTTCATTCTTG--------------TGTTGTTTTGTTTTAAGGTTCATTATTTCCCTATAAGGAA-AAATGTAGTTTACATTTCACTTCGGTGGT-----TACAAAGCA-AAAGCATGCCTCAAAACCATAAGTAAATTAACAGTAAGAAATCCAAAA-----------------CAACCCAGCAAGGATTGTAAAGGCATTGCAAAAGTG----TAGGGAAAATAAGTGTAACGACAACATGATGGGCATTTCTAGATGAAACATATTATAGGACTCTC-TTTTAATATATTCTCTAGGGAA-AAACATA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169016810 396 - 170955103 CATTTTGAAGTGATTTATGTGCATTTAAATGTTAAAATTGAATTATGA---ATTTTATTTCTTAGCTAGTGACGTTTTAATGCTTCA-TTTTTTAATTCAGTAAAATGTTTAGGATTTAACACCTAAAGTGGGTTTCATTCTTG--------------TGTTGTTTTGTTTTAAGGTTCATTATTTCCCTGTAAGGAA-AAATGTAGTTTACATTTCACTTTGGTGGT-----TACAAAGCA-AAAGCATGCCTCAAAACCATAAGTAAATTAACAGTAAGAAATCCAAAA-----------------CAACCCAGCAAGGATTGTAAAGGCATTGCAAAAGTG----TAGGGAAAATAAGTGTAACGACAACATGATGGGCATTTCTAGATGAAACATATTATAGGACTTTC-TTTTAATATATTCTCTAGGGAA-AAACATA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8304046 396 + 10161646 CATTTTGAAGTGATTTATGTGCATTTAAATGTTAAAATTGAATTATGA---ATTTTATTTCTTAGCTAGTGACATTTTAATGCTTCA-TTTTTTAATTCAGTAAAATGTTTAGGATTTAACACCTAAAGTGGGTTTCATTCTTG--------------TGTTGTTTTGTTTTAAGGTTCATTATTTCCCTGTAAGGAA-AAATGTAGTTTACATTTCACTTTGGTGGT-----TACAAAGCA-AAAGCATGCCTCAAAACCATAAGTAAATTAACAGTAAGAAATCCAAAA-----------------CAACCCAGCAAGGATTGTAAAGGCATTGCAAAAGTG----TAGGGAAAATAAGTGTAACGACAACATGATGGGCATTTCTAGATGAAACATATTATAGGACTTTC-TTTTAATATATTCTCTAGGGAA-AAACATA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1333514 396 + 3144229 CATATTGAAGTGATTTATGTGCATTTAAATGTTAAAATTGAATTATGA---ATTTCATTTCTTAGCTAGTGACGTTTTAATGCTTCA-TTTTTTAATTCAGTAAAATGTTTAGGATTTAACACCTAAAGTGGGTTTCCTTCTTG--------------TGTTGTTTTGTTTTAAGGTTCATTATTTCCCTGTAAGGAA-AAATGTAGTTTACATTTCACTTTGGTGGT-----TACAAAGCA-AAAGCATGCCTCAAAACCATAAGTAAATTAACAGTAAGAAATCCAAAA-----------------CAACCCAGCAAGGATTGTAAAGGCATTGCAAAAGTG----TAGGGAAAATAAGTGTAATGACAACATGATGGGCATTTCTAGATGAAACATATTATAGGACTTTC-TTTTAATATATTCTCTAGGGAA-AAACATA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96612911 396 + 98384682 CATATTGAAGTGATTTATGTGCATTTAAATGTTAAAATTGAATTATGA---ATTTTATTTCTTAGCTAGTGATGTTTTAATGCTTCATTTTTTTAATTCAGTAAAATGTTTAGGATTTAACACCTAAAGTGGGCTTCATTCTTG--------------TGTTGTTTTGTTTGAAGGTTCATTATTTCCCTGTAAGGAA-AAATGTAGTTTACTTTTCACTTTGGTGGT-----TACAAAGCA-AAA-TATGCCTCAAAACCATAAGTAAATTAACAGTAAGAAATCCAAAA-----------------CAACCCAGCAAGGATTGTAAAGGCATTGCAAAAGTG----TAGGGAAAATAAATGTAATGACAACATGATGGGCATTTCTAGATGAAACATATCATAGGACTTTC-TTTTAATGTATTCTCTAGGGAA-AAACATA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8155641 396 - 10857215 CATATTGAAGTGATTTATGTGCATTTAAATGTTAAAATTGAATTATGA---ATTTTATTTCTTAGCTAGTGACGTTTTAATGCTTCA-TTTTTTAATTCAGTAAAACGTTTAGGATTTAACACCTAAAGTGGGTTTCATTCTTG--------------TGTTGTTTTGTTTTAAGGTTCATTATTTCCCTGTAAGGAA-AAATGTAGTTTACATTTCACTTTGGTGGT-----TACAAAGCA-AAAGCATGCCTCAAAACCATAAGTAAATTAACAGTAAGAAATCCAAAA-----------------CAACCCAGCAAGGATTGTGAAGGCATTGCAAAAGTG----TAGGGAAAATAAGTGTAATGACAACATGATGGGCATTTCTAGATGAAACATATTATAGGACTTTC-TTTTAATATATTCTCTAGGGAA-AAACATA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15551606 397 - 23502949 CATATTGAAGTTATTTATGTGCATTTCAATGTTAAAATTGAATTATGA---ATTTTATTTCTTAGCTAGTGACATTTTAATGCTTCA-TTTTTTAATTCAGTAAAATGTTTAGGATTTAACACCTAAAGTGGGTTTCATTCTTG--------------TGTTGTTTTGTTTTAAGGTTCATTATTTCCCCGTAAGGAA-AAATGTAGTTTACGTTTCACTTTGGTGGT-----TACAAAGCACAAAGCATGCCTCAAAATCATAAGTAAATTAACAGTAAGAAATCCAAAA-----------------CAACCCAGCAAGGATTGTAAAGGCATTGCAAAAGTG----TAGGGAAAATAAGTGTAATGACAACATGATGGGCATTTCTAGATGAAACATATTATAGGGCTTTC-TTTTAATATATTCTCTAGGGAA-AAACATA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169819572 408 + 171630274 CATATTGAAGTTATTTATGTGAATTTAAAGGTTAAAACTGAATTATGA---ATTTCATTTCTTAGCTAGTGACTTTTTAATGCTTCG-TCTTTTAATTCAGCAAAACGTATCGGATTTAACACCTAAAGTGCGTTTCACTTTTG--------------TGTCGTGTTGTTTTAAGGTTCATTATTTCCCTGTAAGAAACAAATGTAGTTTACACTTCACTTTGCTGGT-----TACAAAACACAAAACATGTCTCAAAACGATAAGTAAATTAACAGTAAGAAATGCAAAAAAAAAAAAAA------CAAAACCAGCAGGAATTGTAAACGCATTGCAGAAGTA----TAGAGCAAATAAGCTTAATGGCAACAAGATGGGCATTTCTAGATGAAACATAGC-TAGGTCTTTC-TTTTAGTTCATTCTCTAGTGAA-AATCATC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1243771 388 - 2905041 CATATTAAAGTTATTTATGTGAATTTAAAGGTTAAAATTGAATTATGA---ATTTCGTTTCTTAGCTAGTGACTTTTTAATGCTTCA-TCTTTTAATTCAGCAAAACGCATAGGATTTAACACCTAAAGTGCGTTTTATTCTTG--------------TGTTGTTTTGTTTTAAGTTTCATTATTTCCCTGTAAGAAAAAAATGTAGTTTACGTTTCACTTTGTTGGT-----TACAAAGTACAAAACATGTCTCAAAACCACAAGTAAATTAACAGTAACAAATGCAAAAAAA--------------AAATCCAGCAGGGATTGTAAACGCATT-----------------GCAAATAAGCTGAATGGCAACAAGATGGGCATTTCTAGATGAAACATATCATAGGTCTTTC-TTTTAATTTATTCTCTAGTGAA-AAACATC i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1194800 400 - 2164891 CATATTGAAGTTATTTATGTGAATTTAAAGGTTAAAATTGAATTATGA---ATTTCAATTCTTAGCTAGTGACTTTTTAATGCTTCA-TCTTTTAATTCAGCAAAACATATAGGATTTAACACCTAAAGTGTGTTTCATTCTTG--------------TGTTGTTTTGTTTTAAGGTTCATTATTTCCCTGTGAGAAAAAAATGTAGTTTACGTTTCACTTTCCTGGT-----TACAAAGCACAAAACATGTCTCAAAACCATAAGTAAATTAACAGTAAGAAATGCAAAAAA---------------AACTCCAGCAGGGATTGTAAACGCATTAAAAAAGTA----TAGTGCAAATAAGCTTAATGGCAACAAGATGGGCATTTCTAGATGAAACATATCATAGGTCTTTC-TTTTAATTTATTCGTTAGCGAA-AAACATC i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1441249 414 - 1813869 CATGTTGAAGTTATTTATGTGAATTTAAAGGTTAAAATTGAATTATGA---ATTTCATTTCTTATCTAGTGACTTTTTAATGCTTCA-TCTTTTAATTCAGCAAAACGTATAGGATTTAACATCTAAAATGCATTTCCTTCTTG--------------TGTTGTTTTGTTTTAAGGTTCATTATTTCCCTGTAAGAAA-AAATGTAGTTTACGTTTCACTTTGCTGGT-----TACAAAGCAGAAAACAAGTCTCAAAACCATAAGTAAATTAACAGTAAGAAATGCaaaaaaaaaaaaaaacaaagaaaaCCCAGCAGGGATTGTAAATGCATTGCAAAACTA----TAGTGCAAATAAGCTTAATGGCAACAAGATGGGCATTTCTAGAAGAAACATATCATAGGTCTTTC-TTTTAATTTATTCTCTAGTGAA-AAACGTC i aotNan1.NW_018494782v1 I 27 C 0 s canFam3.chr1 56111917 407 + 122678785 AATCATGAAGACACACACACACATTCACA-ACTAAAATTGAATTATTAATCATTGTCTTACCTAAACAGTGACTTTCT-ATGCTTCC-TCTTTTGATTCACTAAAATATTTCAGACCTAACATCTAAGATAGGTTTCTTTCTAGTTATTTTTTGTTGTTGTTGTTTCGTTTTAGGGTTTATTATTT-CCTGTGAAGAA-AACTGTAATTTTGACCTCACTTTGCTCGTTCATGTGCAAAACACAGATCATTCCTCAAAATCATCAGTAAATTAAAAATGAGAAATCAGGAA-----------------G-----AGCAAAGAGTGTAAATGCACTGCAAAAGAAGTACCAGTGAAGATAGGCTTAGTGGCAACAAGAATGGCAATTTTA---------ttttatttactattt-ttaaaatttaaattctagctaattaacata i canFam3.chr1 C 0 I 3611 e dasNov3.JH569188 483526 1638 + 760995 I a score=3914561.000000 s hg38.chr6_KB021644v2_alt 15943 417 + 185823 ATTTTTAAACTTTGTTCTCCATTTTGCATGTATACAATATTAGATGAATGTACAAATATGTTGTTTAAGTATCTTAGAAACTTAAGAATATGGAAAATAAAACCACTTTTGGGGTTGGGGTTTCCTCAAGCCATTCTTATTTACTGAGTCGGTTGCCTCTGGAAACTTTTAGCTCATGTAACTAAACATCGTTCACTGCCCTGTTCTTTATGCATCTCAGTAAGTTCCACCTGCAGAATGGTGAAATTTTGAAGTGGAAAGGACCTTGATCATAAATTAGTTCAATCTCTATAGATGGTTAAAAGGCACAATTAGGTAAGTAagatctgccatttattaaggacccagtaggcatttggtgtt---------ttgcatgcattatttctcatgtttatacaaacccaaaaagatattctcccctc-t s panTro5.chr6 173483909 417 + 175400573 ATTTTTAAACTTTGTTCTCCATTTTGCATGTATACAATATTAGATGAATGTACAAATATGTTGTTTAAGTATCTTAGAAACTTAAGAATATGGAAAATAAAACCACTTTTGGGGTTGGAGTTTCCTCAAGCCATTCTTATTTATTGAGTCAGTTGCCTCTGGAAAATTTTAGCTCATGTGACTAAACATCGTTCACTGCCCTGTTCTTTATGCATCTCAGTAAGTTCCACCTGCAGAATGGTGAAATTTTGAAGTGGAAAGGACCTTGATCATAAATTAGTTCAATCTCTATAGATGGTTAAAAGGCACAATTAGGTAAGTAagagctgccatttattaaggacccagtaggcatttggtgtt---------ttgcatgcattatttctcatgtttatacaaacccaaaaagatattctcccctc-t i panTro5.chr6 C 0 C 0 s panPan2.chr6 171734272 417 + 173848474 ATTTTTAAACTTTGTTCTCCATTTTGCATGTATACAATATTAGATGAATGTACAAATATGTTGTTTAAGTATCTTAGAAACTTAAGAATATGGAAAATAAAACCACTTTTGGGGTTGGAGTTTCCTCAAGCCATTCTTATTTATTGAGTCAGTTGCCTCTGGAAAATTTTAGCTCATGTGACTAAACATCGTTCACTGCCCTGTTCTTTATGCATCTCAGTAAGTTCCACCTGCAGAATGGTGAAATTTTGAAGTGGAAAGGACCTTGATCATAAATTAGTTCAATCTCTATAGATGGTTAAAAGGCACAATTAGGTAAGTAagagctgccatttattaaggacccagtaggcatttggtgtt---------ttgcatgcattatttctcatgtttatacaaacccaaaaagatattctcccctc-t i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11419400 417 - 12463322 ATTTTTAAACTTTATTCTCCATTTTGCATGTATACAATATTAGATGAATGTACAAATATGTTGTTTAAGTATCTTAGAAACTTAAGAATATGGAAAATAAAACCACTTTTGGGGTTGGAGTTTCCTCAAGACATTCTTATTTATTGAGTCGGTTGCCTCTGGAAAATTTTAGCTCATGTGACTAAACATCATTCACTGCCCTGTTCTTTATGCATCTCAATAAGTTCCACCTGCAGAATGGTGAAATTTTGAAGTGGAAATGACCTTGATCATAAATTAGTTCAATCTCTATAGATGGTTAAAAGGCACAATTAGGTAAGTAagagctgccatttatgaaggacccagtaggcatttggtgtt---------ttgcatgcattatttctcatgtttatacaaacccaaaaagatattctcccctc-t i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156245542 417 + 157873769 ATTTTTAAACTTTGTTCTCCATTTTGCATGTATACAATATTAGATGAATGTACAAGTATGTTATTTAAGTATCTTAGAAACTTAAGAATATGGAAAATAAAACCATTTTTTGGGTTGGAGTTTCCTCAAGCCATTCTTATTTATTGAGTCGGTTGCCTCTGGAAAATTTTAGCTCAGGTGACTAAACATCATTCACTGCCCTGTTCTTTATGCATCTCAATAAGTTCCACCTGCAGAACGGTGAAATTTTGAAGTGGAAAGGACCTTGATCATAAATTAGTTCAATCTCTATAGATGGTTAAAAGGCACAATTAGATAAGTAagagctgccatttattaaggacccagtaggcatttggtgtt---------ttgcatgcattatttctcatgtttatacaaacccaaaaagatattctcccctc-t i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170271597 415 + 172585720 ATTTTTAAACTTTGTTCTCCATTTTGTATGTATATAATATTAGCTGAATATTTGTATATGTTGTTTAAGTATCTTAGAAACTTAAGAATATGGCAAATAAAACTATTTTTTGGGTTGGAGTTTCCTCAAGCCATTCTTATTTATTGAGTCAGTTGCC-CCGGAAAATTTTAGCTCATGTGACTAAACGTGATTCACTGCCCTATTCTTTATGCATCTCAGTAAGTTCCAACTGCAGAATGGTGAAATTTTGAAGTGGAAAGGACCTTGGTCATAAATTAGTTCAATCTCTATAGATGGTTAAAAGGCACAATTAGGTAAGTAagagctaccatttattaaggacccagtaggcatttggtgtt---------ttgcatgcattatttctcatgtttatacaaacccaaaaagatactct-ccctc-t i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169017206 415 - 170955103 ATTTTTAAACTTTGTTCTCCATTTTGTATGTATATAATATTAGCTGAATGTACAAATATGTTGTTTAAGTATCTTAGAAACTTAAGAATATGGCAAATAAAACTATTTTTTGGGTTGGAGTTTCCTCAAGCCATTCTTATTTATTGAGTCAGTTGCC-CTGGAAAATTTTAGCTCATGTGACTAAACGTGATTCACTGCCCTATTCTTTATGCATCTCAGTAAGTTCCAACTGCAGAATGGTGAAATTTTGAAGTGGAAAGGACCTTGGTCATAAATTAGTTCAATCTCTATAGATGGTTAAAAGGCACAATTAGGTAAGTAagagctaccatttattaaggacccagtaggcatttggtgtt---------ttgcatgcattatttctcatgtttatacaaacccaaaaagatactct-ccctc-t i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8304442 415 + 10161646 ATTTTTAAACTTTGTTCTCCATTTTGTATGTATATAATATTAGCTGAATGTACAAATATGTTGTTTAAGTATCTTAGAAACTTAAGAATATGGCAAATAAAACTATTTTTTGGGTTGGAGTTTCCTCAAGTCATTCTTATTTATTGAGTCAGTTGCC-CCGGAAAATTTTAGCTCATGTGACTAAACGTGATTCACTGCCCTATTCTTTATGCATCTCAGTAAGTTCCAACTGCAGAATGGTGAAATTTTGAAGTGGAAAGGACCTTGGTCATAAATTAGTTCAATCTCTATAGATGGTTAAAAGGCACAATTAGGTAAGTAagagctaccatttattaaggacccagtaggcatttggtgtt---------ttgcgtgcattatttctcatgtttatacaaacccaaaaagatactct-ccctc-t i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1333910 415 + 3144229 ATTTTTAAACTTTGTTCTCCATTTTGTACGTATATAATATTAGCTGAATGTACAAATATGTTGTTTAAGTATCTTAGAAACTTAAGAATATGGCAAATAAAACTATTTTTTGGGTTGGAGTTTCCTCAAGCCATTCTTATTTATTGAGTCAGTTGCC-CCGGAAAATTTTAGCTCATGTGACTAAACGTGATTCACTGCCCTATTCTTTATGCATCTCAGTAAGTTCCAACTGCAGAATGGTGAAATTTTGAAGTGGAAAGGACCTTGGTCATAAATTAGTTCAATCTCTATAGATGGTTAAAAGGCACAATTAGGTAAGTGCgagctaccatttattaaggacccagtaggcatttggtgtt---------ttgcatgcattatttctcatgtttatacaaacccaaaaaaatactct-ccctc-t i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96613307 415 + 98384682 ATTTTTAAACTTTGTTCTCCATTTTGCATGTATACAATATTATCTGAATGTACAAATACGTTGTTTAAGTACTTTATAAACTTAAGAATATGGCAAATAAAACTATTTTTTGGGTTGGAGTTTCCTCAAGCCGTTCTTATTTATTGAGTCAGTTGCC-CCGGAAAATTTTAGCTCATGTGACTAAACATCATTCACTGTCCTATTCTTTATGCCTCTCAGTAAGTTCCAACTGCAGAATGGTGAAATTTTGAAGTGGAAAGGACCTTGATCATAAATTAGTTCAATCTCTATAGATAGTTAAAAGGCACAATTAGGTAAGTAAGAGCTGCTGTTTATTAAGGACCCAGTAGGCATTTGGTGTT---------TTGCATGCATTATTTCTCATGTTTATACAAACCCAAAAAGATACTCT-CCCTC-T i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8156037 415 - 10857215 ATTTTTAAACTTTGTTCTCCATTTTGTACATATATAATATTAGCTGAATGTACAAATATGTTGTTTAAGTATCTTAGAAACTTAAGAATATGGCAAATAAAACTATTTTTTGGGTTGGAGTTTCCTCAAGCCATTCTTATTTATTGAGTCAGTTGCC-CCGGAAAATTTTAGCTCATGTGACTAAACGTGATTCACTGCCCTATTCTTTATGCATCTCAGTAAGTTCCAACTGCAGAATGGTGAAATTTTGAAGTGGAAAGGACCTTGGTCATAAATTAGTTCAATCTCTATAGATGGTTAAAAGGCACAATTAGGTAAGTAagagctaccatttattaaggacccagtaggcatttggtgtt---------ttgcatgcattatttctcatgtttatacaaacccaaaaagatactct-ccctc-t i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15552003 423 - 23502949 ATTTTTAAACTTTGTTTTCCATTTTGCATGTATACAATATTAGCTGAATGTACA-ATATGTTGTTTAAGTATCTTAGAAACTTAAGAATACAGCAAATAAAACTATTTTTTGGGTTGGAGTTTCCTCAAGCCATTCTTATTCATTGAGTCAGTTGCC-CTGGAAAATTTTAGCTCATGTGACTAAACGTCATTCACTGCCCTATTCTTTATGCATCTCAGTAAGTTCCAGCTGCAGAATGGTGAAATTTTGAAGTGGAAAGGACCTTGATCATAAATTAGTTCAATCTCTATAGATGGTTAAAAGGCACAATTAGGTAAGTGagagctgccgtttattaaggacccagtaggcatttggtgtttttcatgcatttcatgcattatttctcatgtttatacaaacccaaaaagatactct-ccctc-t i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169819980 415 + 171630274 ATTCTTAAACTGTGTTCTCCGTTTGGCATATATGAAATATCTGATGGATGTAGAAATACGTTGTCTAAGTGTCTCAGAAATTTGAGAATGTGGCAAATAAAAGTGTTTTTTGAGTTA-GGTTTCCTCAAGCCATTCTTCCTTATTGAGTCAGTTGCCTCTGGAAGGTTTTAGCTCATGTGACTGAGCATCCTTCCCTGCCCTATTCTTTGTGCATCTCAGTAAGTTCCAGCTGTGGGATGGTGAAATTGTGAAGTGGAAAGGACCTTGATCACAAAAGAGTTCAACCTCTACAGGTGGTTAAAAGGCACAATTACGTAAGTAagagcggccatttattaaggacccagtagtcacttggtgtt---------ttgcatacattatgtcttatgtctttgcaaacccaaaaagatactctcccctc-- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1244159 410 - 2905041 ATTTTTAAACTGTGTTCTCCATTTGGCATATATAAAATATTAGATGAATGTAGAAATACGTTGTCTAAGTATCTTAGAAATGTAAGAATGTGACAAATAAAAGTATTTTTTGAGCTATGGTTTCCTCAAGCCATTCTTCCTTATTGAGTCAGTTGCCCCTGGAAAACCTGAGCTCCTGTGACTAAACATTCTTCACTGCCCTGTTCTTTGTGC-CCTCAGTAGGTTCCAGCTGCACGATGGTGAAATTGTGAAGTGGAAAGGA-CTTGATCACAAATTAGTTCAATCTCTATAGATGGTTAAAAGGCACAATTAC----ATAAGAGAGGCcatttattaaggacccagtagtcacttggtgat---------ttgtatacattatttcttatgttaatgcaaacccaaagagatagtctcccctt-- i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1195200 411 - 2164891 ATTTTTAAACTGTGTTCTCCATTTGGCATGTATAAAATATTAGATGAATGTAGAAATATGCTGTCTAAGTATCTTAGAAATTTAAGAATGTGGCAAACTAAAGTATTTTTTGAGTTAGGGTTTCCT-----CATTCTTCCTTATAGAGTCAGTTGCCCCTGGAAAACTTTAGCTCATGTGACTAAACATCCTTCACTGCCCTATTCTTTGTGCATCTCAATAAGTTCCAGCTGCAGGATGGTGAAACTGTGAAGTGGAAAGGACCTTGATGACAAATTAGTTCAATCTCTATAGATGGTTAAAAGGCACAATTACATAAGTAAGAGCGGCCATTTATTAACGACCCAGTAGTCACTTGGTGTT---------TTGCATACGTTATTTCTTATGTTTATGCAAACCCAAAGAGATACTCTCCCCTC-- i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1441663 416 - 1813869 ATTTTAAAACTGTGTTCTCCATTTGGCATGTGTAAAATATTAGATGAATGCAGAAATACTTTGTCTAAGTATCTTAGAAATTTAAGAATGTGGCAAATAAAAGTATTTTTTGAGTTAGGGTTTCGTCAAGCCATTCTTCCTTGTTGAGTCAGTTGCCCCTGGAAAATTTTAGCTCATGTGACTAAACATCCTTCACTGCCCTATTCTTTGTGCATCTCAATAAGTTCCAGCTGCAGGATGATGAAATTGTGAAGTGGAAAGGACCCTGATCACAAATTAGTTCAATGTCTATAGATGGTT-AAAGTCACAATTACATAAGTAagagcggccatctgttaaggacccagtagtcacttggtgtt---------ttgcatacattatttcctatgtttatgcaaacccaaaaagatactctctcctcc- i aotNan1.NW_018494782v1 C 0 I 287 e dasNov3.JH569188 483526 1638 + 760995 I e canFam3.chr1 56112324 3611 + 122678785 I a score=2626389.000000 s hg38.chr6_KB021644v2_alt 16360 281 + 185823 tttttaaaagaagacattaagatgtagaaaagttatttgccctagcaaaaactagtggcacagattcaagtccaggttagcctgtctccagttcatcct-------------------------------------------------------------------------------------------cctGTTCTCCAGTCC--------------TTGTTGCTTTCTCTTGAAATTAGATTCTAGATTCTTGGATTCCTCCTCCAAAGCTTTTCCTATCCTAGCACTATCTCCAATATCACAAAAGGATTTGGAAATATATTGCTTCTATATCCCTAATATACAATAGGGATCTATTGCATTTCTGAAATAATGTTAGTTC--T s panTro5.chr6 173484326 281 + 175400573 tttttaaaagaagacattaagatgtagaaaagttatttgccctagcaaaaactggtggcacagattcaagtccaggttagcctgtctccagttcatcct-------------------------------------------------------------------------------------------cctGTTCTCCAGTCC--------------TTGTTGCTTTCTCTTGAAATTAGATTCTAGATTCTTGGATTCCTCCTCCAAAGCTTTTCCCATCCTAGCACTATCTCCAATATCACAAAAGGATTTGGAAATATATTGCTTCTATATCCCTAATATACAACAGGGATCTATTGCATTTCTGAAATAATGTTAGTTC--t i panTro5.chr6 C 0 C 0 s panPan2.chr6 171734689 281 + 173848474 tttttaaaagaagacattaagatgtagaaaagttatttgccctagcaaaaactggtggcacagattcaagtccaggttagcctgtctccagttcatcct-------------------------------------------------------------------------------------------cctGTTCTCCAGTCC--------------TTGTTGCTTTCTCTTGAAATTAGATTCTAGATTCTTGGATTCCTCCTCCAAAGCTTTTCCCATCCTAGCACTATCTCCAATATCACAAAAGGATTTGGAAATATATTGCTTCTATATCCCTAATATACAACAGGGATCTATTGCATTTCTGAAATAATGTTAGTTC--t i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11419817 281 - 12463322 tttttaaaagaagacattaagatgcagaaaagttatttgccctagcaaaaactggtggcacagattcaagtccaggttagcctgtctccaGTTTATCCT-------------------------------------------------------------------------------------------CCTGTTCTCCAGTCC--------------TTGTTGCTTTCTCTTGAAATTAGATTCTAGATTCTTGGATTCCTCCTCCAAAGCTTTTCCCATCCTAGCACTATCTCCAATATCGCAAAAGGATTTGGAAATATATTGCTTCTATATCCCTAATATACAATAGGGATCTATTGCATTTCTGAAATAATGTTAGTTC--t i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156245959 281 + 157873769 tttttaaaagaagacagtaaggtgtagaaaagttatttgccctagcaaaaactggtggcacagattcaagtccaggttagcctgtctccagttcgtcct-------------------------------------------------------------------------------------------cctGTTCTCCAGTCC--------------TTGTTGCTTTCTCTTGAAATCAGATTCTAGATTCTTGGATTCCTCCTCCAATGCTTTTCCCATCCTAGCACTATCTCCAATATCACAAAAGGATTTGGAAATATATTGCTTCTATATCCCTAATATACAATAGGGATGTATTGCATTTCTGAAATAATGTTAGTTC--T i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170272012 280 + 172585720 tttttgaaagaagacattaagatgtagaaaagttatttgccctagcaaaaaccggtggcacagattcgagtccaggttagcctgtctccagttcatcct-------------------------------------------------------------------------------------------cctGTTCTTCAGTCC--------------TTGTTGCTTTCTCTTGAGATTAGATTCTAGATTCTTGGATTCCTCCTCCAATGCTTTTCCCAT-CTAGCACTATTTCTGATAACACAAAAGGATTTGGAAATATATTGTTTCAATATCCCTAATATATAATAGGGATCTATTGCATTTCTGAAATAATGTTAGTTC--t i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169017621 280 - 170955103 tttttgaaagaagacattaagatgtagaaaagttatttgccctagcaaaaaccggtggcacagattcgagtccaggttagcctgtctccagttcatcct-------------------------------------------------------------------------------------------cctGTTCTTCAGTCC--------------TTGTTGCTTTCTCTTGAGATTAGATTCTAGATTCTTGGATTCCTCCTCCAATGCTTTTCCCAT-CTAGCACTATTTCTGATAACACAAAAGGATTTGGAAATATATTGTTTCAATATCCCTAATATATAATAGGGATCTATTGCATTTCTGAAATAATGTTAGTTC--t i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8304857 280 + 10161646 tttttgaaagaagacattaagatgtagaaaagttatttgccctagcaaaaaccggtggcacagattcgagtccaggttagcctgtctccagttcatcct-------------------------------------------------------------------------------------------cctGTTCTTCAGTCC--------------TTGTTGCTTTCTCTTGAGATTAGATTCTAGATTCTTGGATTCCTCCTCCAATGCTTTTCCCAT-CTAGCACTATTTCTGATAACACAAAAGGATTTGGAAATATATTGTTTCAATATCCCTAATATATAATAGGGATCTATTGCATTTCTGAAATAATGTTAGTTC--t i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1334325 371 + 3144229 tttttaaaagaagacattaagatgtagaaaagtcatttgccctagcaaaaaccggtggcacagattcaagtccaggttagcctgtctccagttcatcctcctGTTCTTCAGTTCATCCTCCTGTTCTCCAGTTCATCCTCCTGTTCTTCAGTTCATCCTCCTGTTCTTCAGTTCATCCTCCTGTTCTTCACCTGTTCTTCAGTCC--------------TTGTTGCTTTCTCTTGAGATTAGATTCTAGATTCTTGGATTCCTCCTCTAATGCTTTTCCCAT-CTAGCACTATCTCTGATAACACAGAAGGATTTGGAAATATATTGTTTCAATATCCCTAATATACAATAGGGATCTATTGCATTTCTGAAATAATGTTAGTTC--t i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96613722 280 + 98384682 TTTTTAAAAGAAGACATTAAGATGTAGAAAAGTTATTTGCCCTAGCAAAAATCGGTGGCACAGATTCGAGTCCAGGTTAGCCTGTCTCCAGTTCATCCT-------------------------------------------------------------------------------------------CCTGTTCTTCAGTCC--------------TTGTTACTTTCTCTTGAGATTAGATTCTAGATTCTTGGATTCCTCCTCCAATGCTTTTCCCAT-CTAGCACTATCTCTGATAACACAAAAGGATTTGGAAATATATTGTTTCAATATCCCTAATATATAATAGGGATCTATTGCATTTCTGAAATAATGTTAGTTC--t i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8156452 280 - 10857215 tttttaaaagaagacattaagatgtagaaaagttatttgccctagcaaaaaccggtggcacagattcgagtccaggttagcctgtctccagttcatcct-------------------------------------------------------------------------------------------cctGTTCTTCAGTCC--------------TTGTTGCTTTCTCTTGAGATTAGATTCTAGATTCTTGGATTCCTCCTCTAATGCTTTTCCCAT-CTAGCACTATCTCTGATAACACAGAAGGATTTGGAAATATATTGTTTCAATATCCCTAATATACAATAGGGATCTATTGCATTTCTGAAATAATGTTAGTTC--t i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15552426 279 - 23502949 tttttaaaagaagacattaagatgtagaaaagttatttgccctagcaaaaaccggtggcacagattcgagtccaggttagcctgtctccagttcatcct-------------------------------------------------------------------------------------------cctGTTCTTCAGTCC--------------TCGTTGCTTTCTCTTGAGATTAGATTCTAGATTCTTGGATTCCTCCTCCAAAGCTTTTCCCAT-ATAGCACTATCTC-GATAACACAAAAGGATTTGGAAATATATTGTTTCAATATCCCTAATATACAATAGGGATCTATTGCATTTCTGAAATAATGTTAGTTC--t i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169820395 294 + 171630274 tttttaaaaaaagacattaagatgttgaaaagctatttgccctagcaagcactggtggcatagattcagctccagctcagtctgtctccaCTTCGTCCT-------------------------------------------------------------------------------------------CCTGTTCTCCAGTCCTCTGCAGCCACACCTCGTTGCTGTCTCTGGAAATTAGATCCTCGATTCTTGGAGTCCGCCTCCAGTGCTTTTCCCATCCTAGCACTATCTCTGATAACACCAAAGGACTTGGAAATACTTCGCTTCAATATCCCTAATATACAATAGTGATCCATTGCATTTCTGAAATAATGTTAGTTC--- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1244569 294 - 2905041 tttttaaaagaagacaataagatgtagaaaaattatttgccctagcaaccactggtagcatagattcagctccggctcagtctgtctccagTTCACCCT-------------------------------------------------------------------------------------------CCCGTTCACCAGTCCTCCACAGCCACACGTTGTTGCTGTCTCTGGAAATTAGATCCTAGATTCTTGGATTCTTCCTCCAATGCTTTTCCCATCCTAGCGCTATCTCTGATAACACCAAAGAATTTGGAAATACTTTGCTTCAATATCCCTAATATACAATAGTGATCCATTGCATTTCTGAAATAATGTTAGTTC--- i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1195611 295 - 2164891 TTTTTAAAAGAAGACATTAAGATGTAGAAAAGTTATTTGCCCTAGCAAACACTGGTGGCATAGGTTCATCTCCAGCTCGGTGGGTCTCCAGTTCGTCCT-------------------------------------------------------------------------------------------CCTGCCCTCTAGTCCTCCGCAGCCACACCTCATTGCTGTCTCTGGAAATTAGATCCTAGATTCTTGGATTCTTCCTCTAGTGCTTTTCCTGTCCTAGTGCTCTCTCTGATAACACCAAAGGATTTGGAAATACTTTGCTTCAATATCCCTAATATACAATTGTGATCCATTGCATTTCTGAAATAATGTTAGTTCT-- i cebCap1.NW_016107695v1 C 0 I 7 s aotNan1.NW_018494782v1 1442366 295 - 1813869 tttttaaaagaagacattaagatgtagaaaaattatttgccctagcgaacactggtggcatagatccagctccagctcagtccgtctccagtccgtcct-------------------------------------------------------------------------------------------cctgtcctccagtcctccgcagccacacctcCTTGCTGTCTCTGGAAATTAGATCCTAGATTCTTGGATTCCTCCTCCAATGCTTTTCCCATCCTAGCGCTATCTCTGATAACACCAAAGCATTTGGAAATACTTTGCTTCAATATCCCCGATATACAATAGTGATCTGTTGCATTTCTGAAATAATGTCAGTTC-T- i aotNan1.NW_018494782v1 I 287 I 7 e dasNov3.JH569188 483526 1638 + 760995 I e canFam3.chr1 56112324 3611 + 122678785 I a score=210658.000000 s hg38.chr6_KB021644v2_alt 16641 54 + 185823 ATTAA--TTTTTTATTAAATTTAATAGAAATTTCTTTTAAA-ATTTTTATTAAATCT s panTro5.chr6 173484607 54 + 175400573 attaa--ttttttattaaatttaatagaaatttcttttaaa-atttttattaaatct i panTro5.chr6 C 0 C 0 s panPan2.chr6 171734970 54 + 173848474 attaa--ttttttattaaatttaatagaaatttcttttaaa-atttttattaaatct i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11420098 54 - 12463322 attaa--ttttttattaaatttaatagaaatttctttgaaa-atttttattaaatct i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156246240 52 + 157873769 ATTAA--TTTTTTATTAAATTTAACAGAAATTTCTTTTAAA-ATTTTTATTAAAT-- i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170272292 55 + 172585720 attaaa-tttttaattaaatttaatagaaatttcttttaaa-ttttttattaaaatt i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169017901 55 - 170955103 attaaa-tttttaattaaatttaatagaaatttcttttaaa-ttttttattaaaatt i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8305137 55 + 10161646 attaaa-tttttaattaaatttaatagaaatttcttttaaa-ttttttattaaaatt i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1334696 56 + 3144229 attaaa-ttttttattaaatttaatagaaatttcttttaaatttttttattaaaatt i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96614002 54 + 98384682 attaaa-ttttttattaaatttaatagacattt-tttcaaa-atttttattaaaatt i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8156732 55 - 10857215 attaaa-ttttttattaaatttaatagaaatttcttttaaa-ttttttattaaaatt i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15552705 56 - 23502949 attaaatttttttattaaatttaatagaaatttcttttaaa-ttttttattaaaata i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169820689 8 + 171630274 ------------------------------TTTCTTTC------------------- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1244863 8 - 2905041 ------------------------------TTTCTCTC------------------- i saiBol1.JH378287 C 0 C 0 e aotNan1.NW_018494782v1 1442661 7 - 1813869 I e cebCap1.NW_016107695v1 1195906 7 - 2164891 I e dasNov3.JH569188 483526 1638 + 760995 I e canFam3.chr1 56112324 3611 + 122678785 I a score=336463.000000 s hg38.chr6_KB021644v2_alt 16695 39 + 185823 TTTTTATTAA-AA-TTTTTTCAGCTCCTTGCTCTTTACTTT s panTro5.chr6 173484661 39 + 175400573 tttttattaa-at-tttttTCAGCTCCTTGCTCTTTACTTT i panTro5.chr6 C 0 I 320 s panPan2.chr6 171735024 39 + 173848474 tttttattaa-at-tttttTCAGCTCCTTGCTCTTTACTTT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11420152 39 - 12463322 tttttattaa-at-tttttTCAGCTCCTTGCTCTTTACTTT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156246292 27 + 157873769 --------------TTTTTTCAGCTCCTTGCTCTTTACTTT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170272347 39 + 172585720 tttttattaa-at-tttttTCAGCTCCTTGCTCATTACTTT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169017956 39 - 170955103 tttttattaa-at-tttttTCAGCTCCTTGCTCATTACTTT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8305192 39 + 10161646 tttttattaa-at-tttttTCAGCTCCTTGCTCATTACTTT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1334752 40 + 3144229 ttttTACTAATTT-TTTTTTCAGCTTCTTGCTCATTACTTT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96614056 40 + 98384682 tttttattaa-attttttTTCAGCTCCTTGCTCATTACTTT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8156787 40 - 10857215 tttttattat-atattttttCAGCTTCTTGCTCATTACTTT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15552761 40 - 23502949 tttttattaa-attttttTTCAGCTCCTTGCTCATTACTTT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169820697 39 + 171630274 TTTTTATTAG-TT-TTTGTCCGGCTCCTTGCTCTTTACTTT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1244871 39 - 2905041 TTTTTATTAA-TT-TTTTTTCAGCTCCTTGCTCTTTACTTT i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1195913 39 - 2164891 TTTTTATTAA-TT-TTTTTCCAGCTCCTTGCTCTTTACTTT i cebCap1.NW_016107695v1 I 7 C 0 s aotNan1.NW_018494782v1 1442668 39 - 1813869 TTTTTATTAA-TT-TTTTTCCAGCTCCTTGCTCTTTACTAT i aotNan1.NW_018494782v1 I 7 C 0 e dasNov3.JH569188 483526 1638 + 760995 I e canFam3.chr1 56112324 3611 + 122678785 I a score=558492.000000 s hg38.chr6_KB021644v2_alt 16734 59 + 185823 AAAACTGTTTTTCCTTTGTCTTCCAACACATCAACAAAAGGACTtatccaggatggg--tg- s panTro5.chr6 173485020 59 + 175400573 aaaacTGTTTTTCCTTTGTCTTCCAACACATCAACAAAAGGACTtatccaggatggg--tg- i panTro5.chr6 I 320 C 0 s panPan2.chr6 171735063 59 + 173848474 AAAACTGTTTTTCCTTTGTCTTCCAACACATCAACAAAAGGACTtatccaggatggg--tg- i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11420191 60 - 12463322 AAAACTGTTTTTCCTTTGTCTTCCAACACATCAACAAAAGGACTtatccaggatggg--tga i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156246319 59 + 157873769 AAAGCTGTTTTTCCTTTGTCTTCCAACACATCAACAAAAGGACTtatccaggatggg--tg- i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170272386 59 + 172585720 AAAACTGTTTTTCCTTTGTCTTCCAACACATCAACAAAAGGACTtatccaggatggt--tg- i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169017995 59 - 170955103 AAAACTGTTTTTCCTTTGTCTTCCAACACATCAACAAAAGAACTtatccaggatggt--tg- i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8305231 59 + 10161646 AAAACTGTTTTTCCTTTGTCTTCCAACACATCAACAAAACGACTtatccaggatggt--tg- i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1334792 59 + 3144229 AAAACTGTTTTTCCTTTGTCTTCCAACACATCAACAAAAGGACTtatccaggatggg--tg- i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96614096 59 + 98384682 AAAACTGTTTTTCCTTTGTCTTCTGACACATCAACAAAAGGACTtatccaggatggt--tg- i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8156827 58 - 10857215 AAAACTGTTTTTCCTTTGTCTTCCAACACATCAACAAAAGGACTTAT-CAGGATGGG--TG- i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15552801 58 - 23502949 AAAACTG-TTTTCCTTTGTCTTCCAACACATCAACAAAAGGACTtatccaggatggg--tg- i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169820736 59 + 171630274 AAAACATTTTTGCCTTTGTCTTCCAACGTATTAACAAAAGGACTtatccaggatggg--ga- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1244910 61 - 2905041 AAAACATTTTTGCCTTTGTCTTCCAACACATCAACAAAAGGACTtatccaggatgggttaa- i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1195952 60 - 2164891 AAAACATTTTTGCCTTTGTCTTCCAACACATCAACAAAAGGACTtatccaggatggg-taa- i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1442707 59 - 1813869 AAAACATTTTTGCCTTTGTCTTCCAACACATCAACAAAAGGGCTtatccaggatggt--ta- i aotNan1.NW_018494782v1 C 0 C 0 e dasNov3.JH569188 483526 1638 + 760995 I e canFam3.chr1 56112324 3611 + 122678785 I a score=7295525.000000 s hg38.chr6_KB021644v2_alt 16793 751 + 185823 aaaaa--aatcacacagcaaaagaataagaagacagaacaaccaacaaagaagagaaaaatttaaacaaatgat---ttatgacagaagatatataaatggaaaataaccac-atgaaatcaacagcatt----atttaccaggaaaat-gcaaatatgaaagcacaatgatatatcacctcaaaccaaccacaa--tggataatagt-aaaaaaccctgacaattctaagtgtcggtgtag----ttataataagcaactaaaattttcattcattcctagtaagaatgtaaattagtgcaaacactttggaaattatgttggcagtttattacagagtgaaaaatacacctaaaatatgacccagccatggcattcctacatctttaatcaacagaaatgaaagcaagatccatccaaagatgtgtatagaaatacccacatcagctttgttgatatgagttaaattggaagcagcccaatgcccatcaacagttgaatggataaataaattgtgttggagtaaaagaatggaatactattcaaaaggatgaacaatatattgatacatagaacaacctcaatacttttggaaatcatcataacgaccaaaagaagcaagatggaaatgaaaa-----------------------gtaatactcaaagaaggtcaactctaatctgttgtgacataaatagtatcagtggtttcctgggccaagagaatagaatgaggattgactgtgaagaggcagaggggaaattctta-tttttgaggcaatcgaaa- s panTro5.chr6 173485079 751 + 175400573 aaaaa--aatcacacagcaaaagaataagaagacagaacaaccaacaaagaagagaaaaatttaaacaaatgat---ttatgagagaagatatataaatggaaaataagcac-atgaaatcaacagcatt----atttaccaggaaaat-gcaaatatgaaagcacaatgagatatcacctcaaaccaaccacaa--tggataatagt-aaaaaaccctgacaattctaagtgttggtgtag----ttataataagcaactaaaattttcattcattcctagtaagaatgtaaattagtgcaaacactttggaaattatgttggcagtttattacaaagtgaaaaatacacctaaaatatgacccagccatggcattcctacatctttaatcaacagaaatgaaagcaagatccatccaaagatgtgtatagaaatacccacatcagctttgttgatatgaggtaaattggaagcagcccaatgcccatcaacagttgaatggataaataaattgtgttggagtaaaagaatggaatactagtcaaaaggatgaacaatatattgatacatagaacaacctcaatacttttggaaatcatcataatgatcaaaagaagcaagatggaaatgaaaa-----------------------gtaatactcaaagaaggtcaactctaatctgttgtgacataaataatatcagtggtttcctgggccaagagaatagaatgaggattgactgtgaagaggcagatgggaaattctta-tttttgaggcaatcgaaa- i panTro5.chr6 C 0 C 0 s panPan2.chr6 171735122 751 + 173848474 aaaaa--aatcacacagcaaaagaataagaagacagaacaaccaacaaagaagagaaaaatttaaacgaatgat---ttatgagagaagatatataaatggaaaataagcac-atgaaatcaacagcatt----atttaccaggaaaat-gcaaatatgaaagcacaatgagatatcacctcaaaccaaccacaa--tggataatagt-aaaaaaccctgacaattctaagtgttggtgtag----ttataataagcaactaaaattttcattcattcctagtaagaatgtaaattagtgcaaacactttggaaattatgttggcagtttattacaaagtgaaaaatacacctaaaatatgacccagccatggcattcctacatctttaatcaacagaaatgaaagcaagatccatccaaagatgtgtatagaaatacccacatcagctttgttgatatgaggtaaattggaagcagcccaatgcccatcaacagttgaatggataaataaattgtgttgcagtaaaagaatggaatactagtcaaaaggatgaacaatatattgatacatagaacaacctcaatacttttggaaatcatcataatgaccaaaagaagcaagatggaaatgaaaa-----------------------gtaatactcaaagaaggtcaactctaatctgttgtgacataaataatatcagtggtttcctgggccaagagaatagaatgaggattgactgtgaagaggcagatgggaaattctta-tttttgaggcaatcgaaa- i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11420251 750 - 12463322 aaaaa--aatcacacagcaaaagaataagaagacagaacaaccaacaaagaagag-aaaatttaaacaaatgat---ttatgagagaagatatataaatggaaaataagcac-atgaaatcaacagcatt----atttaccaggaaaat-gcaaatatgaaagcacaatgagatatcacctcaaaccaaccacaa--tggataatagt-aaaaaaccctgacaattctaagtgttggtgtag----ttataataagcaactaaaattttcattcattcctagtaagaatgtaaattagtgcaaacactttggaaattatgtgggcagtttattacagagtgaaaaatacacctaaaatatgacccagccatggcattcctacatctttgatcaacagaaatgaaagcaagatccatccaaagaagtgtatagaaataccgacatcagctttgttgatatgagttaaattggaagcagcccaatgcccatcaacagttgaatggataaataaattgtgttggagtaaaagaatggaatactagtcaaaaggatgaacaatatattgatacatagaacaacctcagtacttttggaaatcatcataatgaccaaaagaaccaagaaggaaatgaaaa-----------------------gtaatactcaaagaaggtcaactctaatctgttgtgacataaataatatcagtggtttcctgggccaagagaatagaatgaggattgactgtgaagaggcagaggggaaattctta-tttttgaggcaatcgaaa- i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156246378 751 + 157873769 aaaaa--aatcacacagcaaaagaataagaagacagaacaaccaacaaagaagagaaaaatttaaacaaatgat---ttgtgagagaagatatataaatggaaaataagcac-atgaaatcaacagcatt----atttaccaggaaaat-gcaaatatgaaagcacaatgagataccagttcaaaccaaccacaa--tggataatagt-aaaaaaccctgacaattctaagtgttggtgtag----ttataataagcaactaaaattttcattcattcctagtaagaatgtaaattagtgcaaacactttggaaattatgttggcagtttattacagagtgaaaaatacacctaaaatatgacccagccatggcatccctacatctttaatcaacagaaatgaaagcaagatccatccaaagatgtgtatagaaatacccacatcagctttgttgatatgagttaaactggaagtagcccaatgcccatcaacagttgaatggataaataaattgtgttggagtcaaagaatggaatactagtcaaaggaatgaacaatatattgatacatagaacaacttcaatacttttggaaatcatcataatgaccaaaagaagcaagatggaaatgaaaa-----------------------gtaacacacaaagaaggtcaactctaatctgttgtgacataaataatatcagtggtttcctgggccaagagaatagaatgaggattgactgtgaagaggcagaggagaaattctta-cttttgaggcaatcaata- i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170272445 771 + 172585720 aaaaa--aatcactcaacaaaagaataagaagacagaacaaccaacgaagaagagaaatatttaaacaaatgat---ttaggagagaagatatataaaaggaaaataagcgt-atgaaatcaacagcatt----attcaccaggaaaat-gcaaatatgaaagcacagtgagatatcacttcaaaccaaccacaaagtggttggt-----aaaaaccctgacaattctaagtgttggtgtag----ttataatgagcaactaaaattttcattcattcctagtaagaatgcaaattagtgcaaacactttggaaattatgctggtagtttattacaaagtgaaaaatacacctacaatatgacccagcaatggcattcctacatctttaatcaatagaaatgaaagcaagatccatccaaagatgtatgtagaaatgcccacatcagctttattgatataagttaaattggaaacagcccaatgcccaccaacagttaaatggataaataaattgtatgagattcaaagaatggaatactagtcaaaagaatgaacaatatattgatacattgaacaacctcaatacttttggaaatcataataatgaccaaaagaagcaagatgg-aatgaagacacacccataacatttgacttacgtaatactcaaagaaggtcaactccaatctgttgtgacataaataatattagtggtttcctgggccaagaaaatagaatggggattgactgtgaagaggcagaggggaaattctta-tttctgaggcaatggaaa- i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169018054 771 - 170955103 aaaaa--aatcactcaacaaaagaataagaagacagaacaaccaacagagaagagaaatatttaaacaaatgat---ttaggagaaaagatatataaaaggaaaataagcgt-atgaaatcaacagcatt----attcaccaggaaaat-gcaaatatgaaagcacagtgagatatcacttcaaaccaaccacaaagtggttggt-----aaaaaccctgacaattctaagtgttggtgtag----ttataatgagcaactaaaattttcattcattcctagtaagaatgcaaattagtgcaaacactttggaaattatgctggtagtttattacaaagtgaaaaatacacctacaatatgacccagcaatggcattcctacatctttaatcaatagaaatgaaagcaagatccatccaaagatgtatgtagaaatgcccacatcagctttattgatataagttaaattggaaacagcccaatgcccaccaacagttaaatggataaataaattgtatgagattcaaagaatggaatactagtcaaaagaatgaacaatatattgatacattgaacaacctcaatacttttggaaatcataataatgaccaaaagaagcaagatgg-aatgaagacacacccataacatttgacttacgtaatactcaaagaaggtcaactccaatctgttgtgacataaataatattagtggtttcctgggccaagaaaatagaatggggattgactgtgaagaggcagaggggaaattctta-tttctgaggcaatggaaa- i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8305290 772 + 10161646 aaaaa--aatcactcaacaaaagaataagaagacagaacaaccaacaaagaagataaatatttaaacaaatgat---ttaggagagaagatatataaaaggaaaataagcat-atgaaatcaacagcatt----attcaccaggaaaat-gcaaatatgaaagcacagtgagatatcacttcaaaccaaccacaaagtggttggt-----aaaaaccctgacaattctaagtgttggtgtag----ttataatgagcaactaaaattttcattcattcctagtaagaatgcaaattagtgcaaacactttggaaattatgctggtagtttattacaaagtgaaaaatacacctacaatatgacccagcaatggcattcctacatctttaatcaatagaaatgaaagcaagatccatccaaagatgtatgtagaaatgcccacatcagctttattgatatgagttaaattggaaacagcccaatgcccaccaacagttaaatggataaataaattgtatgagattcaaagaatggaatactagtcaaaagaatgaacaatatattgatacattgaacaacctcaatacttttggaaatcataataatgaccaaaagaagcaagatgg-aatgaagacacacccataacatttgacttacgtaatactcaaagaaggtcaactccaatctgttgtgacataaataatattagtggtttcctgggccaagaaaatagaatggggattgactgtgaagaggcagaggggaaattctta-tttctgaggcaatggaaat i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1334851 773 + 3144229 aaaaa-gaatcacataacaaaagaataagaagacagaacaaccaacaaagaagagaaatatttaaacaaatgat---ttaggagagaagatatataaaaggaaaataagcgt-atgaaatcaacagcatt----atttaccaggaaaat-gcaaatatgaaagcacagtgagatatcacttcaaaccaatcacaaagtggttggt-----aaaaaccctgacaattctaagtgttagtgtag----ttataatgagcagctaaaattttcattcgttcctagtaagaatgcaaattagtgcaaacactttggaaattatgctggcagtttattacaaagtgaaaaatacacctacaatatgacccagcaatggcattcctacatctttaatcaatagaaatgaaagtaagatccatccgaagatgtatgtagaaatgcccacatcagctttattgatatgagttaaattggaagcagtccaatgcccaccaacagttgaatgggtaaataaattgtgtgagattcaaataatggaatactagtcaaaagaatgaacaatatattgatacactgaacaacctcaatacttttggaaatcataataatgaccaaaagaagcgagatggaaatgaagacacacccataacatttgacttatgtaatactcaaagaaggtcaactctaatctgttgtgacatacataatattagtggtttcctgggccaagaaaatagaatggggattgactgtgaagagacagaggagaaattctta-tttttgaggcaatggaaa- i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96614155 766 + 98384682 aaaaa--actcacacaacaaaagaataagaagacagaacaaccaataaagaagagaaatatttaaacaaatgat---ttaggagagaagatacataaaaggaaaataagcgt-atgaaatcaacagcatt----atttaccaggaaaat-gcaaatatgaaagcacagtgagatatcacttcaaaccaaccacaaagtggttggt----aaaaaaccctgacaattctaagtgttggtgtag----ttataatgagcagctaaaattttcattcattcctagtaagaatgcaaattagtgcaaacac--tggaaattatgctggcagtttattacaaaatgaaaaatacacctacaatatgacccagcaatggcattcctacatctttaatcaatagaaatgaaagtaagatccatccaaagatgtatgtagaaatgcccacatcagctttattgatacaagttaaactggaaacagcccaatgcccaccaacagttaaatgg----ataaattgtgtgagattcaaagaatggaatactagtcaaaagaatgaacaatatattgatacattgaacaacctcaatacttttggaaatcataataatgaccaaaagaagcaagatggaaatgaagacacacccataacatttgacttacgtaatactcaaagaaggtcaactctaatctgttgtgacataaataatattagtggtttcctgggccaagacaatagaatggggattgactgtgaagaggcaga-gggaaattctta-tttttgaggcaatggaaa- i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8156885 773 - 10857215 AAaaa-gaatcacataacaaaagaataagaagacagaacaaccaacaaagaagagaaatatttaaacaaatgat---ttaggagagaagatatataaaaggaaaataagcgt-atgaaatcaacagcatt----atttaccaggaaaat-gcaaatatgaaagcacagtgagatatcacttcaaaccaaccacaaagtggttggt-----aaaaaccctgacaattctaagtgttagtgtag----ttataatgagcagctaaaattttcattcgttcctagtaagaatgcaaattagtgcaaacactttggaaattatgctggcagtttattacaaagtgaaaaatacaccgacaatatgacccagcaatggcattcctacatctttaatcaatagaaatgaaagtaagatccattcaaagatgtatgtagaaatgcccacatcagctttattgatatgagttaaattggaagcagtccaatgcccaccaacagttgaatggataaataaattgtgtgagattcaaagaatggaatactagtcaaaagaatgaacaatatattgatacactgaacaacctcaatacttttggaaatcataataatgaccaaaagaagcaagatggaaatgaagacacacccataacatttgacttatgtaatactcaaagaaggtcaactctaatctgttgtgacataaataatattagtggtttcctgggccaagaaaatagaatggggattgactgtgaagagacagaggggaaattctta-tttttgaggcaatggaaa- i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15552859 771 - 23502949 aaaaaaaaatcacacaacgaaagaataacaa---agaacaaccaacaaagaagagaaatatttaaacaaaaggt---ttaggagagaagatatataaaaggaaaataagcac-atgaaatcaacagcatt----atttaccaggaaaat-gcaaatatgaaagcacagtgagatatcacttcaaaccaaccacaaagtggttggt-----aaaaaccctgacaattctaagtgttggtgtag----ttataataagcaactaaaattttcattcatccctagtaagaatgcaaattagtgcaaacactttggaaattatgctggcagttttctacaaagtgaaaagtacacctacaatatgacccagcaatggcattcctacatctttaatcaatagaaatgaaagcaagatccatccaaagatgtatgtagaaatatccacatcagctttattgatatgagttaaattggaagcagtccaatgcccaccaacagttgaatggataaataaattgtgtgagattcaaagaatggaatactagtcaaaagaatgaacaatatattgatacattgaacaacctcaatacttttggaaatcataataatgaccaaaagaagcaagatggaaatgaagacacacccataacatttgacttacataatactcaaagaaggtcaactctaatctgttgtgacataaataatattagtggtttcctgggccaagaaaatagaatggggattgactgtgaagaggcagaggggaaattctta-tttttgaggcaatggaaa- i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169820795 762 + 171630274 aaaaa--aatcacacaacaaaacaataagaagacagagcagccaacaaagaggaaaaatagtgaaacaaacgct---ttatgagagaagatacatagatggaaaacaagcacaatggaatccacagcgtt----actcaccaggaaaat-gcaaatacg-gagc-caaggagatatcacttcaaaccacctacaa--tggataacagt-gaaaaaccctgacaattctatttgttcgtatag----ttacaataagcaactacaattttcattcattcctagtaagaatgtaagttggtacaagcactttgaaaattaggttggcagtttattacaaagtgaaaaacacacctagcataggacccaccaatggcatttctagatcttcagtcaatggaaatgagagtgagatccatctaaagatgtgtctacaaatgcccacgtcagctttattgat--gagctaaattggaaacagcccaatgcccac---cagctgaatagataaataaattgtgttggattcacacaacagaataccagtcaaaagagtgaacaatatattaatacacagaacaacctcagtactttcggaaatcataataatggtcaaaagaagcaagatgcagaagaagagacaccaataaaatttgacttacataatactccaagaaggtcagctctaatctgttgtgacataaatcctgtcactggtttcctgggacaagagcat------aggattgactgtgaggccacagagggaaaatcctta-ttttgggggcaatggaaa- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1244971 767 - 2905041 aaaaa--agtcacacaacaaaagaataagaagacagaacaaccaacaaagaggagaaatatttaaacaaatgtt---ttatgagagaagatatatacatggaaaataagcac-gtgaaatcaacaacatt----acttaccaggaaaac-gcaaatgtgaaagc-caatgagatctcacttcaaaccaactagaa--tggataatagt-gaaaaaccctgacaattcactttgttggtgtag----ttataataagcaactgaaattttcattcattcctagtaagaatgtaaattggtacaagccctttgaaaattaagttggtagtttattacaaagtgaaaaatacacctagcatatgacccaccaatggcatttctagatcttcagtcaatagaaatgaaagtaagatccatctaaaaatgtgtttacaaatgcccacatcaactttattggt--gagttaaattggaaacagcccaaagcccgt---cagctgaatagataaataaattgtgttggattcacacaacagaatactagtcaaaagaatgaacaatatattgatacatagaacaacctcagtacttttggaaa-cataataatggtcaaaagaagcaagatgcagaagaagagacatccataaaatttgacttacataatactcaaagaaggtcagctctaatccgttgtgacataaatcatatcagtggtttcctgggccaagagaatagaatgaggattgactgttaggcagcagagggaagattctta-tttttgaggcaatggaaa- i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1196012 765 - 2164891 aaaaa--aatcacacagttaaagaataagaagacagaacaaccaacaaagaggagaaatatttaaacaaatgct---ttatgagagaagatatat--atggaaaaaaggcac-atgagatcaacagcatt----acttaccaggaaaac-acaaatatgaaagc-caatgagatatcacttcaaaccaactagaa--tggataatagt-g-aaatccctgacaattctatttgttggtgtag----ttataataagcaactaaaattttcattcattcctagtaagaatgtaaattggtacaagcactttgaaaattaggttagcagtttattacaaagtgaaaaatacacctagcatatggcccaccaatggcatttctagatcttcagtcaatagaaatgaaagtaagatccatctaaaaatgtgtttataaatgcccacatcagctttattgat--gagttaaattggaaacggcccaaagcccat---tagctgagtagataaataaattgcgttggattcacacagaagaatactagtcaaaagaatgaacaatatattgatacatagaacaacctcagtacttttggaaatcataataatggtcaaaagaagcaagatgcagaagaagggacacccataaaatttgacttacgtgatactcaaagaaggtcagctctaatctgttgtggcataaatcatgtcagtggtttcctaggccaagagaatagaatgaggattgactgtaaggcggcagagggaaaattctaa-tttttgaggcaatggaaa- i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1442766 769 - 1813869 aaaaa--aatcacacaacaaaagaataagaagacagaacaaccaacaaagaggagaaatatttaaacaaacgct---gtatgagagaagatatatagatggaaaataagcac-atgaaatcaacagcatt----acttaccaggaaaat-gcaaatatgaaaga-caatgagacatcaattcaaaccaactagaa--tggataatagt-gaaaaactccgacaattctatttgttggtgtgg----ttataataagcagctaaaattttcattcattcctagtaagaatgtaaattggtacaagcactttgaaaattaggttggcagtttattacaaagtgaaaaatacacctagcatatgacccaccaatggcatttctagatcttcagtcaatagaaatcaaagtaagatccacctaaagatgtgtccacaaatgcacacatcagctttgttgat--gagttaaattggaaacagcccaatgcccat---cagctgaatagataaataaattgtgttggattcacacaacagaatcctagtcaaaagaatgaacaatatattggtacacagaacaacctcagtacttttggaaatcataataatggtcaaaagaagcaagatgcagaagaagagatacccataaaatttgacttatgtaatactcaaagaaggtcagctctaatctgctgtgacataaatcatatcagtggtttcctgggccaagagaatagaatgaggattgactgtgaggtggcagagggaaaattcttattttttgaggcaatggaaa- i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10912012 696 - 12073884 aaaaa--aa------aAaaaaaaaaaaaaacaacaacaaaacaaaaaaagtggagaaagatttgaacaaacactgtatcatcacaagagatgaat-----ggaaatgagtac-ataaaaatggttgtattcttaatgtatcaggaaaacaaaaaatataaaagcacagtgagaacctgcttcatagcaaccatga--tgggtcacagtaaaagaaaattggcaataccaagtttgggtgaggtttattataataagtaattagaattttcttgcattcccagtaagaatgtaaattagtacaaccaccttggaaattagcttggaagtttcttactaagttaaaaatacaactaaaatatgatcc---------------------ttattcaacagaaataaaagtggtgaccataccgaggtttttccatgaatgtcaacaccggcttcattcataagag-----ctggagaagacccagtgtcctttgacagA-GAGTAGGC--ACAAGCTGCGTGCCTT------------GTCCAGCTCAGGACAGGGAAGGTTGTG-TGATGCAGAGAACAGCTGGGCTGAGTGTGCAGATCACAGTGATGACCAGAAGGAG----------------------------------AGCCACATGCTGCTC-AGGAAGGTCAGCTctaatctgtggtgatggaaatcacaccagcagcttcct-ggccatgagtgtggagaggggatggccagggaagagggccagggggact--tga-gtttcgagcctgtgaaga- i otoGar3.GL873575 N 0 C 0 e dasNov3.JH569188 483526 1638 + 760995 I e canFam3.chr1 56112324 3611 + 122678785 I a score=1779920.000000 s hg38.chr6_KB021644v2_alt 17544 186 + 185823 ttttttc-tatcttaattgtgttggaggttacatatacgcatcatttgtcaagacatgtcaaactctgta-tttaaaatgaaagcattgt-------actgtatgcacattctccctcaGTAATGTTGATTTAAAAACAATATGG-GAAGATgagataataatgcctatgttgcattactgttgtgagaattcaag s panTro5.chr6 173485830 186 + 175400573 ttttttc-tatcttaattgtgttggaggttacatatacgcatcatttgtcaagacacgtcaaactctgca-tttaaaatgaaagcattgt-------actgtatgcacattctccctcagtaatgttgttttaaaaaCAATATGG-GAAGATgagataataatgcctatgttgcattactgttgtgagaattcaag i panTro5.chr6 C 0 C 0 s panPan2.chr6 171735873 186 + 173848474 ttttttc-tatcttaattgtgttggaggttacatatacgcatcatttgtcaagacacgtcaaactctgca-tttaaaatgaaagcattgt-------actgtatgcacattctccctcagtaatgttgatttaaaaaCAATATGG-GAAGATgagataataatgcctatgttgcattactgttgtgagaattcaag i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11421001 186 - 12463322 ttttttc-tatcttaattgtgttggaggttacatatacgcatcatttgtcaagacatgtcaaactctgta-tttaaaatgaaagcattgt-------actgtatgcacattctccctcaGTAATGTTGATTTAAAAACAATATGG-GAAGATgagataataatgcctatgttgcattactgttgtgagaattcaag i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156247129 186 + 157873769 ttttttc-tatcttaattgtgatgggggttacatatacgcatcatttgtcaagacatgtcaaactctgta-tttaaaatgaaagcattgt-------actgtacactcattctccatcagtaatactgatttaaaaaCAATATGG-GAAGATGAGATAATAATGCCTATGTTGCATTACTGTTGTGAGAATTCGAG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170273216 181 + 172585720 ttttttc-tatcttaattgtgatggaggttacatatacgcatcatttgtcaagacatgtcaaactct--a-tttaaaatgaaagcatttt-------attgtatgcacattctccctcagtaatgttgatctaaaaaCAATATGG-AAAGACGAG---ATAATGCCCATGTTGCAATACTGTTGTGAGAAGTCAAG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169018825 181 - 170955103 ttttttc-tatcttaattgtgatggaggttacatatacgcatcatttgtcaagacatgtcaaactct--a-tttaaaatgaaagcatttt-------attgtatgcacattctccctcaGTAATGTTGATCTAAAAACAATATGG-AAAGACGAG---ATAATGCCCATGTTGCAATACTGTTGTGAGAAGTCAAG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8306062 181 + 10161646 ttttttc-tatcttaattgtgatggaggttacatatacgcatcatttgtcaagacatgtcaaactct--a-tttaaaatgaaagcatttt-------attgtatgcacattctccctcagtaatgttgatctaaaaaCAATATGG-AAAGACGAG---ATAATGCCCATGTTGCAATACTGTTGTGAGAAGTCAAG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1335624 184 + 3144229 ttttttc-tatcttaattgtgatggaggttacatatacacatcatttgtcaagacatgtcaaactct--a-tttaaaatgaatgcatttt-------attgtatgcacattctccctcaGTAATGTTGATCTAAAAACAATATGG-AAAGACGAGATAATAATGCCCATGTTGCAATACTGTTATGAGAAGTCAAG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96614921 184 + 98384682 ttttttc-tatcttaattgtgatggaggttacatatatacatcacttgtcaagacatgtcaaactct--a-tttaaaatgaatgcatttt-------attgtatgcacattctccctcaGTAATGTTGATCTAAAAACAATATGG-AAAGATGAGATAATAATGCCCATGTTGTAATACTGTTGTGAGAAGTCAAG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8157658 184 - 10857215 ttttttc-taacttaattgtgatggaggttacatatacgcatcatttgtcaagacatgtcaaactct--a-tttaaaatgaatacatttt-------attgtatgcacattctccctcagtaatgttgatctaaaaaCAATATGG-AAAGACGAGATAATAATGCCCATGCTGCAATACTGTTGTGAGAAGTCAAG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15553630 184 - 23502949 ttttttc-tatcttaattgtgatggaggttacatatacgcatcatttgtcaagacatgtcaaactct--a-tttaaaatgaatgcatttt-------attgtatgcacattccccctcagtaatgttgatctaaaaaCAATATGG-AAAGACGAGATAATAATGCCCATGTTGGAATACTGTTGTGAGAAGTCAAG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169821557 194 + 171630274 tgttctc-tatcttaatcgtaatggaggttacatatatgcatcctttgccaaaacatgtcaaactttgta-tttaaaatgagtgcatctAAAATACAATAGCATTCACATTCTCCCTCAGTAATGTTGATTTAAAAACAATGTGGAAAAGATGAGCTGAGCATGCCGATGCTGCATGACTATTGTGGGAATTCGAG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1245738 196 - 2905041 ttttctcttatcttaattgtaatggaggttacatgtgtgcatcatttgccaaaacgtgtcaaactttgtattttaaaatgaatgcattttaaatacaatagtatgcacattctccctcagtagtgttgatttaagaaCAatgtggaaaagatgagttgataatgcctgtgtcgcatgactattgtgagaattcgag i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1196777 189 - 2164891 ttttctc-tatcttaattgtaat----gttacatacatgcatcatttgccaaaacatgtcaaactttgta-tttaaaatgaatgtattttaaatacaatagtatgcacattctccctcaGTAATGTTGATGTAAAAACGATGTGG-AAAGATGAGCTAATAATGCCTATACTGCATGACTATTGTGAGAACTAGAG i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1443535 194 - 1813869 ttttctc-tatcttaattgtgatggaggttacatatatgcatcatttgtcaaaacatgtcaaactttgta-tttaaaatgaatgcattttaaatacaatagtatgcacattctccctcagtaatgttgatttaaaaaCAGTGTGGAAAAGATGAGCTAATCATGCCTATGTTGCATGAGTATTGTGAGAATTCGGG i aotNan1.NW_018494782v1 C 0 I 21 s otoGar3.GL873575 10912708 155 - 12073884 -ttcctc-tatcttgactgtgctgg-ggtcacgtgtatacat-acctgtcaaagcacaccaaac-----A-T-------------------------GCCGTGTTC----TGTGCCTCAGTGATGCTGGTTGTGAAGGGACCTAG-GAAGATGAGACGGTGACAGCCATGCTGCTCT-CTGTTGTGAGGTTTCAAA i otoGar3.GL873575 C 0 C 0 s dasNov3.JH569188 485164 160 + 760995 ttttcgt-tttcttgattgtgctgg-------------------------AAAATACATCAAATTCTATA-CTCAAAATAGGTATGTTTT-------ATCATATGCATTTTAAACCACAATAATGTTGACTTAAAAAAAAGA-AG-AACTatggggcaataatacccacattgcattattattgtgagaatttgat i dasNov3.JH569188 I 1638 C 0 e canFam3.chr1 56112324 3611 + 122678785 I a score=394011.000000 s hg38.chr6_KB021644v2_alt 17730 51 + 185823 gag-----gtGGCCCTATGTGAAAATACCTACCATCTTGCAACTATTTAGTAACTA s panTro5.chr6 173486016 51 + 175400573 gag-----gtGGCCCTATGTGAAAATACCTACCATCTTGCAACTATTTAGTAACTA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171736059 51 + 173848474 gag-----gtGGCCCTATGTGAAAATACCTACCATCTTGCAACTATTTAGTAACTA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11421187 51 - 12463322 gag-----gtGGCCCTATGTGACAATACCTACCATCTTGCAACTATTTAGTAACTA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156247315 51 + 157873769 GAG-----GTGGCCCTATGTGAAAATACCTACCATCTTGCAACTATTTAGTAACTA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170273397 51 + 172585720 TAG-----GTGGCCCTATGTGAAAATACCTACCATCTTGCAGCTATTTAGTAACTA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169019006 51 - 170955103 TAG-----GTGGCCCTATGTGAAAATACCTACCATCTTGCAGCTATTTAGTAACTA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8306243 51 + 10161646 GAG-----GTGGCCCTATGTGAAAATACCTACCATCTTGCAGCTATTTAGTAACTA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1335808 51 + 3144229 TAG-----GTGGCCCTATGTGAAAATACCTACCATCTTGCAGCTATTTAGTAACTA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96615105 51 + 98384682 TAG-----GTGGCCCTATGTGAAAATACCTACCATTTTGCAGCTATTTAGTAACTA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8157842 51 - 10857215 TAG-----GTGGCCCTATGTGAAAATACCTACCATCTTGCAGCTATTTAGTAACTA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15553814 51 - 23502949 TAG-----GTGGCCCTGTGTGAAAATACCTACCATCTTGCAGCTATTTAGTAACTA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169821751 55 + 171630274 AAGGCGGCGTGA-TGCGTGTGACAACACCCACCACCTTGCAACGATTTAGTGACTA i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1245934 47 - 2905041 --------gtgg-catatgtgataaccctcatcaccttgcAACGGTTTAGTAACTA i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1196966 50 - 2164891 AAG-----GTGG-CCTATGTGACAACACCCCCCACCTTGCAACCATTTAGTAACTA i cebCap1.NW_016107695v1 C 0 C 0 s otoGar3.GL873575 10912863 40 - 12073884 GAG-----ATGG-CCTATGTGAGACTGCCTCCCGACTCATGCCCGG---------- i otoGar3.GL873575 C 0 C 0 s dasNov3.JH569188 485324 36 + 760995 gag-----atag-cacatgcaaaattactgacaacatggcga-------------- i dasNov3.JH569188 C 0 C 0 e aotNan1.NW_018494782v1 1443729 21 - 1813869 I e canFam3.chr1 56112324 3611 + 122678785 I a score=815837.000000 s hg38.chr6_KB021644v2_alt 17781 79 + 185823 GCCACAATGA-TTACTCTTGCTCTGTTCT---TTCTTTTTCT-TGTTAGATGTTGTGTCCATTTCAACGTAGCTAATGATATAA s panTro5.chr6 173486067 79 + 175400573 GCCACAATGA-TTACTCTTGCTCTGTTCT---TTCTTTTTCT-TGTTAGATGTTGTGTCCATTTCAACCTAGCTAATGATATAA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171736110 79 + 173848474 GCCACAATGA-TTACTCTTGCTCTGTTCT---TTCTTTTTCT-TGTTAGATGTTGTGTCCATTTCAACCTAGCTAATGATATAA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11421238 79 - 12463322 GCCACAATGA-TTACTCTTGCTCTGTTCT---TTCTTTTTCT-TGGTAGATGTTGTGTCCATTTCAACCTAGCTAGTGATATAA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156247366 79 + 157873769 GCCACAACGA-TTACTCTTGCTCTGTTCT---TTCTTTTTCT-TGTTAGATGTTGTGTCCATTTCAACCTAGCTAATGACATAA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170273448 82 + 172585720 GCCACAATGA-TTACTCTTGCTCTGTTCTTCATTCTTTCTCT-TGTTAGATGTTGTGTCCATTTCAACCTAGCTGGTGATATAA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169019057 82 - 170955103 GCCACAATGA-TTACTCTTGCTCTGTTCTTCATTCTTTCTCT-TGTTAGATGTTGTGTCCATTTCAACCTAGCTGGTGATATAA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8306294 82 + 10161646 GCCACAATGA-TTACTCTTGCTCTGTTCTTCATTCTTTCTCT-TGTTAGATGTTGTGTCCATTTCAACCTAGCTGGTGATATAA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1335859 82 + 3144229 GCCACAATGA-TTACTCTTGCTCTGTTCTTCATTCTTTCTCT-TGTTAGATGTTGTGTCCATTTCAACCTAGCTGGTGATATAA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96615156 82 + 98384682 GTCACAATGA-TGACTCTTGCTCTGTTCTTCATTCTTTCCCT-TGTCAGATGTTGTGTCCATTTCAACCTAGCTGGTGATATAA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8157893 82 - 10857215 GCCACAATGA-TTACTCTTGCTCTGTTCTTCATTCTTTCTCT-TGTTAGATGTTGTGTCCATTTCAACCTAGCTGGTGATATAA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15553865 82 - 23502949 GGCACAAGGA-TTACTCTTGCTCTGTTCTTCATTCTTTCTCT-TGTTAGATGTTGTGTCCATTTCAACCTAGCTGGTGATATAA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169821806 82 + 171630274 GCCGCAGTTG-CCACTCTCGCTCTGTTCTTCATTCTTTTTCT-TCCTAGACGTTGTGTCCATTTCAGCCTCGTTAGTGACATCA i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1245981 82 - 2905041 GCCGCAGTTA-TGACTCTGGCTCTGTTCTTCATTCTTTTTCT-TGCTAGATGTTGTGTCCATTTCAACCTAGCTAATGACGTAA i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1197016 82 - 2164891 GCCGCAGTTA-TTACCCTTGCTCTGTTCTTCATTCTTTTTCT-TGCTAGATGTTGTGTCCATTTCAACCTAGCTCATGACATAA i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1443750 82 - 1813869 GCCTCAGTTA-TCACTCTCGCTCTGTTCTTCATTCTTTTTCT-TGCTAGATGTTGTGTCCATGTCAACCTAGCTAATGACATAA i aotNan1.NW_018494782v1 I 21 C 0 s otoGar3.GL873575 10912903 78 - 12073884 CCCTCCATGACCCACTCCTGCTCATGACT---CACAGCGTCC-TGC-AGACGCCAGGTGTGTCTCAGCCTGACTAAGGG-ATGA i otoGar3.GL873575 C 0 C 0 s dasNov3.JH569188 485360 80 + 760995 ---gcaATTG-TTATTCTTGCTCTATTCTTTATTCCTTCACTGGGTTAGATTTTGGGTTCATTTGATTCTAGTTAATGATATAA i dasNov3.JH569188 C 0 C 0 e canFam3.chr1 56112324 3611 + 122678785 I a score=63325.000000 s hg38.chr6_KB021644v2_alt 17860 5 + 185823 TCTTG s panTro5.chr6 173486146 5 + 175400573 TCTTG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171736189 5 + 173848474 TCTTG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11421317 5 - 12463322 TCTTG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156247445 5 + 157873769 TCTTG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170273530 5 + 172585720 TCTTG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169019139 5 - 170955103 TCTTG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8306376 5 + 10161646 TCTTG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1335941 5 + 3144229 TCTTG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96615238 5 + 98384682 TCTCG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8157975 5 - 10857215 TCTTG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15553947 5 - 23502949 TCTTG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169821888 5 + 171630274 CCTTG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1246063 5 - 2905041 CCTTG i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1197098 5 - 2164891 CCTTA i cebCap1.NW_016107695v1 C 0 I 54 s aotNan1.NW_018494782v1 1443832 5 - 1813869 CCTTG i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10912981 5 - 12073884 CCCTG i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56115935 5 + 122678785 TTTTG i canFam3.chr1 I 3611 C 0 s dasNov3.JH569188 485440 5 + 760995 TCTTG i dasNov3.JH569188 C 0 C 0 a score=302938.000000 s hg38.chr6_KB021644v2_alt 17865 29 + 185823 AATAAGACTTTAGTTA----CTCCAGTGAGATA s panTro5.chr6 173486151 29 + 175400573 AATAAGACTTTAGTTA----CTCCAGTGAGATA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171736194 29 + 173848474 AATAAGACTTTAGTTA----CTCCAGTGAGATA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11421322 29 - 12463322 AATAAGACTTTAGTTA----CTCCAGTGAGATG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156247450 29 + 157873769 AATAAGACTTGAGTTA----CTCCAGTGAGATA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170273535 29 + 172585720 AGCAAGACTTTAGTTA----CTCCAGTGAGATA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169019144 29 - 170955103 AGCAAGACTTTAGTTA----CTCCAGTGAGATA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8306381 29 + 10161646 AGCAAGTCTTTAGTTA----CTCCAGTGAGATA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1335946 29 + 3144229 AGCAAGACTTTAGTTA----CTCCAGTGAGATA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96615243 29 + 98384682 AGCAAGACCTTGGTTA----CTCCAGTGAGATA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8157980 29 - 10857215 AGCAAGACTTTAGTTA----CTCCAGTGAGATA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15553952 29 - 23502949 AGCAAGACTTTAGTTA----CTCCATTGAGATA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169821893 29 + 171630274 AACAAGACTTTCGTGA----CTCCGGTGAGATA i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1246068 29 - 2905041 AATAAGACTTTCATTA----CTCCAGTGAGATA i saiBol1.JH378287 C 0 C 0 s aotNan1.NW_018494782v1 1443837 29 - 1813869 AATAAGACTTTCGTTA----CTCCAGTGAGATA i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10912986 29 - 12073884 AGTGAGACCCAAGTCC----CTCCAGTGGGGTG i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56115940 33 + 122678785 AGAAAGATTTTAGTTGCTTTCTTTCATGGAATA i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 485445 29 + 760995 AGCAAGACGTTAGTTA----CTCTAATGGGGTA i dasNov3.JH569188 C 0 C 0 e cebCap1.NW_016107695v1 1197103 54 - 2164891 I a score=9955055.000000 s hg38.chr6_KB021644v2_alt 17894 895 + 185823 TGACTTACTGTGATCCAGTT-CCATCTACATGTGGAAGCTTGGACTTTTCCTTCCAACCCACCACCCACTTGGTTTC-AAGATCTC--CAGCATC-TTCGGAGGGCAAAGCACACTAATGGCATGAGATGTATAAAAAGATTGAATAACCAGATGGAACTGTGTAAAGTCATTTTATAA-TATACAAATTGGAGGAAACAATTCTTGAAATAAA----TTGAGCCATTGTTACCGACATGGTTGAAATGTTAATTAAAT------TAATTTGTTAGAGTCAATGGTTCATCCATGAAATTGGCATC--------------------TTCCTG-TGCCTGGATGCATGTGTTCTCTAACTTGGT-ATTCCCTTA-ACATTTTA---TTTGCAAA-TAATTTTGAAGTTTATTAAGCTGTTTGACAAACACTGCATCTTGAAATAATCATTTCATTGCCAAATTTTGGATGACTGCTTCTTTCTCATTCTAT-ACATTTGTTT----CTCTCAG----TTTAGC------------AACTGACATTGTTCCTCTTCAATAGTCTTTTTTATGATGTTGACCATGGAATTAGCAGTAATGAAATTGCATAAGCACTGGCAAATTAT-ACTTAAATCATAACATTTTAATA---TGTGG---AAAGATGGAT----------TCTTCTTTGCATTTTGTTTTCTATTTTCACAAG--------TTAAACGTTGAATTTAAAAA--ATGA-GAA--TAGAATTTTGATAGCAGGTCTCATTCAAAAATTTCTGATTTTTCTACTTCATGCTTATGTTCTTATCTGGCAGCTAGAACAAATCTATTGAACTTACACAAAG--AGATGAAGACTACATAG-TCTTTCTTTTTT----CTCT------GTCAGTAAACTGTCAGTGGGC--AAAAAGTACTTATGTTATTTTATGGAAGTAATAATTACTGATTTGGTCACTGAAAAATTGACTCAATCCATCACAAATAGC s panTro5.chr6 173486180 895 + 175400573 TGACTTACTGTGATCCAGTT-CCATCTACATGTGGAAGCTTGGACTTTTCCTTCCAACCCACCACCCACTTGGTTTC-AAGATCTC--CAGCATC-TTCGGAGGGCAAAGCACACTAATGGCATGAGATGTATAAAAAGATTGAATAACCAGATGGAACTGTGTAAAGTCATTTTATAA-TATACAAATTGGAGGAAACAATTCTTGAAATAAA----TTGAGCCATTGTTACCGACATGGTTGAAATGTTAATTAAAT------TAATTTGTTAGAGTCAACGGTTCATCCATGAAATTGGCATC--------------------TTCCTG-TGCCTGGATGCATGTGTTCTCTAACTTGGT-ATTCCCTTA-ACATTTTA---TTTGCAAA-TAATTTTGAAGTTTATTAAGCTGTTTGACAAACACTGCATCTTGAAATAATCATTTCATTGCCAAATTTTGGATGACTGCTTCTTTCTCATTCTAT-ACATTTGCTT----CTCTCAG----TTTAGC------------AACTGACATTGTTCCTCTTCAATAGTCTTTTTTATGATGTTGACCATGGAATTAGCAGTAATGAAATTGCATAAGCACTGGCAAATTAT-ACTTAAATCATAACATTTTAATA---TGTGG---AAAGATGGAT----------TCTGCTTTGCATTTTGTTTTCTATTTTCACAAG--------TTAAACGTTGAATTTAAAAA--ATGA-GAA--TAGAATTTTGACAGCAGGTCTCATTCAAAAATTTCTGATCTTTCTACTTCATGCTTATGTTCTTATCTGGCAGCTAGAACAAATCTATTGAACTTACACAAAG--AGATGAAGACTACATAG-TCTTTCTTTTTT----CTCT------GTCGGTAAACTGTCAGTGGGC--AAAAAGTACTTATGTTATTTTATGGAAGTAATAATTACTGATTTGGTCACTGAAAAATCGACTCAATCCATCACAAATAGC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171736223 895 + 173848474 TGACTTACTGTGATCCAGTT-CCATCTACATGTGGAAGCTTGGACTTTTCCTTCCAACCCACCACCCACTTGGTTTC-AAGATCTC--CAGCATC-TTCGGAGGGCAAAGCACACTAATGGCATGAGATGTATAAAAAGATTGAATAACCAGATGGAACTGTGTAAAGTCATTTTATAA-TATACAAATTGGAGGAAACAATTCTTGAAATAAA----TTGAGCCATTGTTACCGACATGGTTGAAATGTTAATTAAAT------TAATTTGTTAGAGTCAACGGTTCATCCATGAAATTGGCATC--------------------TTCCTG-TGCCTGGATGCATGTGTTCTCTAACTTGGT-ATTCCCTTA-ACATTTTA---TTTGCAAA-TAATTTTGAAGTTTATTAAGCTGTTTGACAAACACTGCATCTTGAAATAATCATTTCATTGCCAAATTTTGGATGACTGCTTCTTTCTCATTCTAT-ACATTTGCTT----CTCTCAG----TTTAGC------------AACTGACATTGTTCCTCTTCAATAGTCTTTTTTATGATGTTGACCATGGAATTAGCAGTAATGAAATTGCATAAGCACTGGCAAATTAT-ACTTAAATCATAACATTTTAATA---TGTGG---AAAGATGGAT----------TCTGCTTTGCATTTTGTTTTCTATTTTCACAAG--------TTAAACGTTGAATTTAAAAA--ATGA-GAA--TAGAATTTTGACAGCAGGTCTCATTCAAAAATTTCTGATCTTTCTACTTCATGCTTATGTTCTTATCTGGCAGCTAGAACAAATCTATTGAACTTACACAAAG--AGATGAAGACTACGTAG-TCTTTCTTTTTT----CTCT------GTCGGTAAACTGTCAGTGGGC--AAAAAGTACTTATGTTATTTTATGGAAGTAATAATTACTGATTTGGTCACTGAAAAATCGACTCAATCCATCACAAATAGC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11421351 895 - 12463322 TGACTGACTGTGAGCCAGTT-CCATCTACGGGTGGAAGCTTGGACTTTTCCTTCCAACCCACCACCCACTTGGTTTC-AAGATCTC--CAGCATC-TTCGGAGGGCAAAGCACACTAATGGCATGAGATGTATAAAAAGACTGAATAACCAGATGGAACTGTGTAAAGTCATTTTATAA-TATACAAATTGGAGGAAACAATTCTTGAAATAAA----CTGAGCGATTGTTACCGACATGGTTGAAATGTTAATTAAGT------TAATTTGTTAGAGTCAACGGTTCATCCATTAAATTGGCATC--------------------TTCCTG-TGCCTGGATGCATGTGTTCTCTAACTTGGT-ATTCCCTTA-ACATTTTA---TTTGCAAA-TAATTTTGAAGTTTATTAAGTTCTTTGACTAACACTGCATCTTGAAATAATCATTTCATTGCCAAATTTTGGATGACTGCTTCTTTCTCATTCTAT-ACATTTGTTT----CTCTCAG----TTTAGT------------GACTGACATTGTTCCTCTTCAATAGTCTTTTTTATGATGTTGACCATGGAATTAGCAGTAATGAAATTGCATAAGCACTGGCAAATTAT-ACTTAAATCATAACATTTTAATA---TGTGG---AAAGATGGAT----------TCTGCTTTGCATTTTGTTTTCTATTTTCACAAG--------TTAAATGTTGAATTTAAAAA--ATGA-GAA--TAGAATTTTGACAGCAGGTCTCATTCAAAAATTTCTGATCTTTCTACTTCATGCTTATGTTCTTATCTGGCAGCTAGAACAAATCTATTGAACTTACACAAAG--AGATGAAGACTACATAG-TCTTTCTCTTTT----CTCT------GTCGGTAAACTGTCAGTGGGC--AAAAAGTACTTCTGTTATTTTATGGAAGTAATAATTACTGATTTGGTCACTGAAAAATCTACTCAATCCATCACAAATAGC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156247479 893 + 157873769 TGACTCACTGTGATCCAGTT-CCATCTACATGTGGAAGCTTGGACTTTTCCTTCCAACCCACCACCCACTTGGTTTC-AAGATCTC--CAGCATC-TTCGGAGGGCAAAGCACACTAATAGCATGAGATGTATAAAAAGATTGAATAACCAGATGGAACTGTGTAAAGTCATTTTATAA-TACACAAATTGGAGGAAACAATTCTTGAAATAAA----TTGAGCCATTGTTACCGACATAGCTGAAATTTTAACTAAA-----------TTGTTAGAGTCAATGGTTCATCCATGAAATTGGCATC--------------------TTCCTA-TGCCCGTATGCACGTGTTCTCCAACTTGGT-ATTCCCTTA-ACATTTTA---TTTGCAAA-TAATTTTGAAGTTTATTAAGCTCTTTGACAAACACTACATCTTGAAATAATCATTTCATTGCCAAATTTTGGATGACTGCTTCTTTCTCATTCTAT-ACATTTGTTT----CTCTCAG----TTTAGCT-----------GACTGACGTTGTTTCTCTTCAATGGTCTTTTTTATGATGTTGACCATGGAATTAGCAGTAATGAAATTACATAAGCACTGGCAAATTAT-ACTTAAATCATAACATTTTACAA---TGTGG---AAAGATGGAT----------TCTGCTTTGCATTTTGTTTTCTATTTTCACAAG--------TTAAACGTTGAATTTAAAAA--ATGA-GAA--TAGAATTTTGACAGCAGGTCTCATTCAAAAATTTCTG-TCTTTCTACTTCATGGTTATGTTCTTATCTGGCAGCTAGAACAGATCTATTGAACTTACACAAAG--AGATGAAGAATATATAG-TCTTTCTTTTTT----CTCT---GTCGTCGGTAAACTGTCAGTGGGC--AAAAAGTACTTCTGTTATTTTATGGAAGTAACAATTACTGATTTGGTCACTAAAAAATCGACTCCATCCATCAAAAATAGC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170273564 904 + 172585720 TGACTTGCTGTGATCCAGTT-CCATCTACATGTGGAAGCTTGGGCTTTTCCTTCCAA-CCACCACCCACTTGGTTTC-AAGATCTC--CAGCATC-TTCGGAGGGCAAAGCACACTAACAGCATAAGATGTAGAAAAAGATTGAATAACCAGATGGAACTGTGTAAAGTCATTTTATAA-TATACAAACTGGAGGAAACAATTCTTGAAATAAA----TTGAGCCATTGTTACTGACATGGTTGAAATTTTAACTGAATGAAAGATAATTTGTTAGAGTAAATGGTTCATCCATGAAATTGGCATC--------------------TTTCTA-TGCCCGTATGCACGTGTTCTCTAACTTGGT-ACTCCCTTA-ACATTTTA---TTTGCAAA-TAATTTTGAAGTTTATTAGGCTCTTTGACAAACACTACATCTTGAAATAATCATTTCATTGCCAAATTTTGGATGACTGCTTCTTTCTCATTCTAT-ACATTTTTCT----CTCTTAG----TTTAGCT-----------GACTGACATTGTTTCTCTTCAATAGTCTTTTTTATGATGTTGACTGTGGAATTAACAGTAATGAAATTACATAAGCACTGACAAATTAT-ACTTAAATCATAACATTTTAATA---TGTGG---AGAGATGGAT----------TCTGCTTGGCATTTTGTTTTCTATTTTCACAAG--------TTAAATGCTGAATTAAAAAA--ATGA-GAA--TAGAATTTTGACAGCAGGTCTCATTCAAAAATTTCTGATTTTTCTACTTGGTGGTTATGTTTTTATCTGGCAGCTAGAACAAATCTATTGAACTTACACAAAG--AGATGAAGACTACATAG-TCTTTCTTTTTT----CTCT---GTCATCGGTAAACTGTCAGTCGGC--AAAAAGTACTTCTGTTATTTTATGGAAGTAATAATTACTGATTTGGTCACTGAAAAATCAACTCTATCCATCATAAATAGC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169019173 904 - 170955103 TGACTTGCTGTGATCCAGTT-CCATCTACATGTGGAAGCTTGGGCTTTTCCTTCCAA-CCACCACCCACTTGGTTTC-AAGATCTC--CAGCATC-TTCGGAGGGCAAAGCACACTAACAGCATAAGATGTAGAAAAAGATTGAATAACCAGATGGAACTGTGTAAAGTCATTTTATAA-TATACAAACTGGAGGAAACAATTCTTGAAATAAA----TTGAGCCATTGTTACTGACATGGTTGAAATTTTAACTGAATGAAAGATAATTTGTTAGAGTCAATGGTTCATCCATGAAATTGGCATC--------------------TTTCTA-TGCCCGTATGCACGTGTTCTCTAACTTGGT-ACTCCCTTA-ACATTTTA---TTTGCAAA-TAATTTTGAAGTTTATTAGGCTCTTTGACAAACACTACATCTTGAAATAATCATTTCATTGCCAAATTTTGGATGACTGCTTCTTTCTCATTCTAT-ACATTTTTCT----CTCTTAG----TTTAGCT-----------GACTGACATTGTTTCTCTTCAATAGTCTTTTTTATGATGTTGACTGTGGAATTAACAGTAATGAAATTACATAAGCACTGACAAATTAT-ACTTAAATCATAACATTTTAATA---TGTGG---AGAGATGGAT----------TCTGCTTGGCATTTTGTTTTCTATTTTCACAAG--------TTAAATGCTGAATTAAAAAA--ATGA-GAA--TAGAATTTTGACAGCAGGTCTCATTCAAAAATTTCTGATTTTTCTACTTGGTGGTTATGTTTTTATCTGGCAGCTAGAACAAATCTATTGAACTTACACAAAG--AGATGAAGACTACATAG-TCTTTCTTTTTT----CTCT---GTCATCGGTAAACTGTCAGTCGGC--AAAAAGTACTTCTGTTATTTTATGGAAGTAATAATTACTGATTTGGTCACTGAAAAATCAACTCTATCCATCATAAATAGC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8306410 904 + 10161646 TGACTTGCTGTGATCCAGTT-CCATCTACATGTGGAAGCTTGGGCTTTTCCTTCCAA-CCACCACCCACTTGGTTTC-AAGATCTC--CAGCATC-TTCGGAGGGCAAAGCACACTAACAGCATAAGATGTAGAAAAAGATTGAATAACCAGATGGAACTGTGTAAAGTCATTTTATAA-TATACAAACTGGAGGAAACAATTCTTGAAATAAA----TTGAGCCATTGTTACTGACATGGTTGAAATTTTAACTGAATGAAAGATAATTTGTTAGAGTCAATGGTTCATCCATGAAATTGGCATC--------------------TTTCTA-TGCCCGTATGCACGTGTTCTCTAACTTGGT-ACTCCCTTA-ACATTTTA---TTTGCAAA-TAATTTTGAAGTTTATTAGGCTCTTTGACAAACACTACATCTTGAAATAATCATTTCATTGCCAAATTTTGGATGACTGCTTCTTTCTCATTCTAT-ACATTTGTCT----CTCTTAG----TTTAGCT-----------GACTGACATTGTTTCTCTTCAATAGTCTTTTTTATGATGTTGACTGTGGAATTAACAGTAATGAAATTACATAAGCACTGACAAATTAT-ACTTAAATCATAACATTTTAATA---TGTGG---AGAGATGGAT----------TCTGCTTGGCATTTTGTTTTCTATTTTCACAAG--------TTAAATGCTGAATTTAAAAA--ATGA-GAA--TAGAATTTTGATAGCAGGTCTCATTCAAAAATTTCTGATTTTTCTACTTGGTGGTTATGTTTTTATCTGGCAGCTAGAACAAATCTATTGAACTTACACAAAG--AGATGAAGACTACATAG-TCTTTCTTTTTT----CTCT---GTCATCGGTAAACTGTCAGTCGGC--AAAAAGTACTTCTGTTATTTTATGGAAGTAATAATTACTGATTTGGTCACTGAAAAATCAACTCTATCCATCATAAATAGC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1335975 904 + 3144229 TGACTTGCTGTGATCCAGTT-CCATCTACATGTGGAAGCTTGGGCTTTTCCTTCCAA-CCACCACCCACTTGGTTTC-AAGATCTC--CAGCATC-TTCAGAGGGCAAAGCACACTAATGGCATAAGATGCAGAAAAAGATTGAATAACCAGATGGAACTGTGTAAAGTCATTTTATAA-TATACAAATTGGAGGAAACAATTCTTGAAATAAA----TTGAGCCATTGTTACTGACATGGTTGAAATTTTAACTGAATTAAAGATAATTTGTTAGAGTCAATGGTTCATCCATGAAATTGGCATC--------------------TTTCTA-TGCCCGTATGCACGTGTTCTCTGACTTGGT-ACTCCCTTA-ACATTTTA---TTTGCAAA-TAATTTTGAAGTTTATTAGGCTCTTTGACAAACACTACATCTTGAAATAATCATTTCATTGCCAAATTTTGGATGACTGCTTCTTTCTCATTCTAT-ACATTTGTCT----CTCTTAG----TTTAGCT-----------GACTGACATTGTTTCTCTTCAATAGTCTTTTTTATGATGTTGACTGTGGAATTAACAGTAATGAAATTACATAAGCACTGACAAATTAT-ACTTAAATCCTAACATTTTAATA---TGTGG---AGAGATGGAT----------TCTGCTTTGCATTTTGTTTTCTATTTTCACAAG--------TTAAATGCTGAATTAAAAAA--ATGA-GAA--TAGAATTTTGACAGCAGGTCTCATTCAAACATTTCTGATTTTTCTACTTGGTGGTTATGTTTTTATCTGGCAGCTAGAACAAATCTATTGAACTTACAAAAAG--AGATGAAGACTACATAG-TCTTTCTTTTTT----CTCT---GTCATCAGTAAACTGTCAGTCGGC--AAAAAGTACTTCTGTTATTTTATGGAAGTAATAATTACTGATTTGGTCACTGAAAAATCAACTCTATCCATCATAAATAGC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96615272 904 + 98384682 TGACTGGCTGTGATCCAGTT-CCATCTACATGTGGAAGCCTGGGATTTTCCTTCCAA-CCACCACCCACTTGGTTTC-AAGATCTC--CAGCATC-TTCGGAGGGCAAAGCACACTAACGGCATAAGATGTAGAAAAAGATTGAATAACCAGAAGGAACTGTGTAAAGTCATTTTATAA-TCTACAAATTGGAGGAAACAATTCTTGAAATAAA----TTGAGCTGTTGTTACTGACATGGTTGAAATTTTAACTAAATTAAAGATAATTTGTTACAGTCAATGGTTCATCCATGAAATTGGCATC--------------------TTTCTA-TGCCCGTATGCCCGTGTTCTCTAACGTGGT-ACTCCCTTA-ACATTTTA---TTTGCAAA-TAATTTTGAAGTTTATTAAGCTCTTTGACAAACACTACATCTTGAAATAATCATTTTGTTGCCAAATTTTGGATGACTGCTTCTTTCTCATTCTAT-ACATTTGTCT----CTCTTAG----TTTAGCT-----------GACTGACATTGTTTCTCTTCAATAGTCTTTTTTATGATGTTGACCGTGGAATTAACACTAATGAAATTACATAAGCACTGACAAATTAT-ACTTAAATCATAACATTTTAATA---TGTGG---AGAGATGGAT----------TCTGCTTTGCATTTTGTTTTCTATTTTCACAAG--------TTAAATGCTGAATTAAAAAA--ATGA-GAA--TAGAATTTTGACAGCAGGTCTCATTTAAAAATTTCTGATCTTTCTACTTCGTGGTTATGTTTTTATCTGGCAGCTAGAACAAATCTATTGAACTTACACAAAG--AGATGAATACTACATAG-TCTTTCTTTTAT----CTCT---GTCATTGGTAACCTGTCAGTCGGC--AAAAAGTACTTCTGTTATTTTATGGAAGTAATAATTACTGATTTGGTTACTGAAAAATCAGCTCCATCCGTCATAAATAGC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8158009 904 - 10857215 TGACTTGCTGTGATCCAGTT-CCATCTACATGTGGAAGCTTGGGCTTTTCCTTCCAA-CCACCACCCACTTGGTTTC-AAGATCTC--CAGCATC-TTCAGAGGGCAAAGCACACTAATGGCATAAGATGTAGAAAAAGATTGAATAACCAGATGGAACTGTGTAAAGTCATTTTATAA-TATACAAATTGGAGGAAACAATTCTTGAAATAAA----TTGAGCCATTGTTACTGACATGGTTGAAATTTTAACTGAATTAAAGATAATTTGTTAGAGTCAATGGTTCATCCATGAAATTGGCATC--------------------TTTCTA-TGCCCGTATGCACGTGTTCTCTAACTTGGT-ACTCCCTTA-ACATTTTA---TTTGCAAA-TAATTTTGAAGTTTATTAGGCTCTTTGACAAACACTACATCTTGAAATAATCATTTCATTGCCAAATTTTGGATGACTGCTTCTTTCTCATTCTAT-ACATTTGTCT----CTCTTAG----TTTAGCT-----------GACTGACATTGTTTCTCTTCAATAGTCTTTTTTATGATGTTGACTGTGGAATTAACAGTAATGAAATTACATAAGCACTGACAAATTGT-ACTTAAATCATAACATTTTAATA---TGTGG---AGAGATGGAT----------TCTGCTTTGTATTTTGTTTTCTATTTTCACAAG--------TTAAATGCTGAATTGAAAAA--ATGA-GAA--TAGAATTTTGACAGCAGGTCTCATTCAAAAATTTCTGATTTTTCTACTTGGTGGTTATGTTTTTATCTGGCAGCTAGAACAAATCTATTGAACTTACAAAAAG--AGATGAAGACTACATAG-TCTTTCTTTTTT----CTCT---GTCATCGGTAAACTGTCAGTTGGC--AAAAAGTACTTCTGTTATTTTATGGAAGTAATAATTACTGATTTGGTCACTGGAAAATCAACTCTATCCATCATAAATAGC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15553981 898 - 23502949 TGACCTGCTGTGATCCAGTT-CCATCTACATGTGGAAGCTTGGGCTTTTCCTTCCAA-CCACCACCCACTTGGTTTC-AAGATCTC--CAGCATC-TTCGGAGGGCAAAGCACACTAACGTCATGAGATGTAGAAAAAGATTGAATAACCAGATGGAACTGTGTAAAGTCATTTTATAA-TATACGAATTGGAGGAAACAATTTTCAAAATAAA----TTGAGGCATTGTTACTGACATGGTTGAAATTTTAACTAAATTAAAGATAATTTGTTAGAGTCAATGGTTCATCCATGAAATTGGCATC--------------------TTTCTA-TGCCCGTATGCACGTGTTCTCTAACTTGGT-ACTCCCTTA-ACATTTTA---TTTGCAAA-TAATTTTGAAGTTTATTAAGCTCTTTGACAAACACTACATCTTGAAATAATCATTTCATTGCCAAATTTTGGATGACTGCTTCTTTCTCATTCTAT-ACATTTGTCT----CTCTTAG----TTTAGCT-----------GACTGACATTGTTTCTCTTCAATAGTCTTTTTTATGATATTGACTGTGGAATTAACAGTAATGAAATTATATAAGCACTGACAAA-------TTAAATCATAACATTTTAGTA---TGTGG---AGAGATGGAT----------TCTGATTTGCATTTTGTTTTCTATTTTCACAAG--------TTAAATGCTGAATTAAAAAA--ATGA-GAA--TAGAATTTTGACAGCAGGTCTCATTCAAAAATTTCTGATCTTTCTACTTTGTGGTTATGTTTTTATCTGGCAGCTAGAACAAATCTATTGAACTTACACAAAG--AGATGAAGACTACATAG-TCTTTCTTTTTT----CTCT---GTCATTGGTAAACTGTCAGCGGGC--AAAAAGTACTTCTGTTATTTTATGGAAGTAATAATTACTAATTTGGTCACTGAAAAATCAGCTCCATCCATCATAAATAGC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169821922 892 + 171630274 TGACTTTCTGTGGTCCAGTT-CCATCTACGTGTGGAAGCCCGGGACTTTCCCTCCAGCCCACTA--CACTTGGTTTC-GAGATCTC--CAGCCTC-TTCGGAGGGCAAAGCACACTAGTGGCATGACAGGTATAAAAAGATGGAACAACCAGATGGAACTGTGTAAAGTCATTTTACAA-TACACAAATTGGAGGAAACAATTATCGAAATAAATTGCTTGAGCCATTGTTACTGAGATGGTTGAGGCGTTAACCAAATTAAAGATAATTTGTTAGACTTAATGGTACATCCGTGAAATTGGCATC------------------CTTTCCTG-TGCCTGCATGCACGTGTTCTCTAACTGGGT-ATTCCCCTA-ACGTTTTA---TTTGCAAA-TAATTTTGAAGTTTATTAAGCTCCCTGACAAACACTACATCTTGAAATAATCATCCGATTGCCAAATTTTGGATGACTGCTTCTTTCTCATTCTAT-ACATTTGTCT----C----AG----TGTAGTT-----------GACTGACATTGCTTCTCTTCAGTCGTCTCCTTTATGATGTTGACTGTGGAATTAACCGTAATGAAATTACGTAAGCACTGGAAAA------------TCATAACATTTTAATA---TGTGG---AAAAATGGAT----------CGTGCTGTGCATTTTGCTTTCTATTTTCACAGG--------TTAAACATTGAATTAAAAAA-----A-GAA--TAGGATTTTGATAGCTGGTCTCATTCGAAAATGTCTGATCTTTCGGTGTCATGCTTACATTCTTATTTAGCAGCTGGAGCAAATCTATTGAACTTACCCAAAG--AGACGAAGGTTACATAG-TCTGTCTTTTCTT---CTCT---GCCATAGGTAAACTGCCAGTGGGC--AAAAATTACTTCTGTTATTTTATAAAACTAATAACTACTGATTTGTTCACTGAAAAATCAACTCCATCTATCATAAATAGC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1246097 893 - 2905041 TGACTTTCTGTGATTCAGTT-TCATCTGCATGTGGAAGCTTGGGGCTTTCCTTCCAGCCCACTA--CGCTTGGTTTC-AAGATCTC--CAGCCTC-TTCAGAGGACAAAGCACACTAATGGCATGAGAGGTAGAAAAAGATTGAACAACCAGATGGAACTGTGTAAAGTCATTTTACAA-TATATAAACTGAAAGAAACAATTATTGAAATACATTGTTTGAGCCA-TGTTACTGACATGGTTGAGGCTTT----AAATTAAAGATAATTTGTTAGAGTTAATGGTACATCCATGAAATTGGTGTT------------------CTTTCCTG-TGCCTGTGTGTGGGTGTTCTCTAACTGGGT-ATTCCCCTA-ACATTTTA---TTTGCAAA-TTATTTTGAAGTTTATTAAGTTCTCTGACAAACTCCACATCTTGAAATAATCATCCCATTGCCAAATTTTGGATTACTGCTTCTTTCTTATTCTAT-ACATTTGTCT----CTCTTAG----TTTAGCT-----------GACTGACATTGTTTCTCTTCAATAGTCTTCTTTATGATGTTGACTGTGGAATTAATGGTAATGAAATTACATAAGCACTGGAAAA------------TCATCACATTTTAATG---TGTAG-AAAAAAACAGAC----------CCTGCTGTGAATTTTGCTTTCTATTTTCAGAAG--------TTAAACATTGAA-TAAAAAA-----A-GAA--TAGAATTTTGACAGCTGGTCTCATTCAAAAATTTCTGATCTTTCTATGTTGTG-GTATGTTCTTATTTGGCAGCTGGAACAAATCTATTGAACTTACCCAAAG--AGATGAAGGCTACAT-G-TCTGTCTTTTTTTTTCCTCT---GCCATCAGTAAACTGCCAGTGGGC--GAAAAGTACTTCTGTTATTTTATAAAAGTAATAACTACTGATTTGTTCACTGAAAAATCAGCTCTATCCATCATAAATAGC i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1197157 897 - 2164891 TGACTTTCTGTGATCCAGTT-CCATGTAAATGTGGAAGCTTGGGGCTTTCCTTCCAGCCCACCA--TGCTTGGTTTC-AAGATCTC--CAGCCTC-TTCAGAGGGCAAAGCACACTAATGGCATGAGAGGTATAAAAAGATTGAACAACCAGATGGAGCTGTGTAAAGTCATTTTACAG-TGTACAAACTGGAGGAAACAATTATTGAAATAAATTTTTTGAGCCATTGTTACTGACATGGTTGAGGCTTTAACTAAATTAAAGATAATTTGTTAGAGTTAATGGTACATCCATGAAATTGGCATT------------------CTTTCTTG-TGCCTGTATGCACGTGTTCTCTAATTGGGT-ATTCCCCTA-ACATTTTA---TTTGCAAA-TAATTTTGAAGTTTATTAAGCTCTCTGACAAACTCTACATCTTGAAATAATCATCCCATTGCCAAATTTTGGATGACTACTTTTTTCTCATTCTAT-ACCTTTGTCT----CTCTTAG----TTTAGCT-----------GACTGACATTGTTTATCTTCAATAGTCTTCTTTATGATGTTGACTGTGGAATTAACGGTAATGAAATTACATAAGCACTGGAAAA------------TCATAACATTTTAATA---TGTGG--AAAAAGTGGAT----------TCTGCTGTGCATTTTGCTATCTATTTTCACAAG--------TTAAACATTGAA-TAAAAAA-----A-GAA--TAGAATTTTGACAGCTGGTCTCATTCAAAAATTTCTGATCTTTCTATGTCATGGTTACTTTCTTATTTGGCAGCTGGAACAAATCTATTGAACTTACCCAAAG--AGATGAAGGCTACATAG-TCTGTCTTTTTTTT--CTCT---GCCATCAGTAAACTGCCAGTGGGC--AAAAAGTACTCCTGTTATTTTATAAAAGTAATGACTACTGATTTGTTCACTGAAAAATCAACTCCATCCATCATAAATAGC i cebCap1.NW_016107695v1 I 54 C 0 s aotNan1.NW_018494782v1 1443866 892 - 1813869 TGACTTGCTGTGATCCAGTT-CCATCTCCATGTGGAAGCCTGGGGCTTTCCTTCCAGCCCAGTA--CACTCGGTTTC-AAGATCTC--CAGCCTC-TTCGGAGGGCAAAGCACACTAATGGCATGAGAGGTATAAAAAGATTGAACAACCAGATGGAACTGTGTAAAGTCATTTTACAA-TATACAAATTGGAGGAAACAATTATTGAAATAAATTGTTTGAGCCATTGTTACTGACATGATTGAGGCTTTAACTAAATTAAAGATAATTTGTTAGTGTTCATGGTACAT-CGTGAAATTGGCATG------------------CTTTCCTG-TGCCTGTATGCAAGTGTGCTCTGACTGGGT-ATTCCCCTA-ACATTTTA---TTTGCAAA-TAATTTTGAAGTTTATTAAGCTCTCTGACAAACACTACATCTTGAAATAATCATCCCATTGCAAGATTTTGGACGACTGCTCCTTTCTCATTCTAT-ACATTTGTCT----CTCTCAG----TTTAGCT-----------GACTGACATTGTTTCTCTTCAATAGTCT-CTTTATGATGCTGACTGTGGAATTAACAGTAATGAAATTACAT-AGCACTGGAAAA------------TCATAACATTCTAATA---TGTGG--AGAAAATGGAT----------TCTGCTGGGCATTTTGCTTTCTATTTTCACCAG--------TTAAACATTTAATTTAAAAA-----A-GAA--TAAAATTTTGACAGCTGGTCTCATTCAAAAATTTCTGATCTTTCTATGTCATGGTTACGTTCTTATTTGGCAGCTGGAACAAATCTATTGAACCTACCCAAAG--AGGTGAAGGCTACGTAG-TCTGCCTTTTT-----CTCT---GCCATCAGTAAACTGCCAGTGGGC--AAAAAGTACTTCCGTTATTTTATAAAAGTAATAACTACTGATTTGTTCACTGAAAAATCAACACCATCCATCATAAATAGC i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10913015 852 - 12073884 GGTCTCACTCTGACCCAGCT-CCATCT-------GGAACCTTGACTTTCCCTGCCAGCCCACAGTCCACCTGGATTC-AAGATCTC--TGCCTTC-TGTAG-GGACAAAGCTTACTAATATTATGAGGTGTTTAAACAGATTGGATAATCTGATGGATCTGTGCAAAGTCTC--------TGCACAAATTAGAGGGCATAGTCATTGAAAGAAATTGTTTAAGACATTCTTACTGACATGGTTGATGCTTTAATTAAGTCAAAAATACTTGGTCAGAATTAACGGCCCACCCGTGAAATCAACATTCTCCGCGAAATCAACATTCTTTCCTACTGTCTGTGTGCCTATGTTCTCTAAATTTGTGATTGTCTTA-AAATTTTA---TTTGCAAA-AGATTTTCACGTTTATTGAGCTTGTTGACGAACTCCCCATCTTGATGGAATCATCCACCTGC-AGATCTTGGATGGCCGCTTCTCTCTCACTCTAG-ACACTTGTCT---------------------------------GATTGGCATTTTTTC----------------------------------------------TGGACTCACATATGTGCCTGTGAATTAT-ACTTCAGTCATGATGTTTTAACA---TGTGG--AAAAAGGGGGA----------TCTGCTTTGCATTTTATCTTCTGTTTACGCAAG--------TTAAACATTGTGTTCAAAATGTATGA-AAA--TAGAGTTTTGGCAGCATATCTCATTCAAAAATCTCTGATCTTTCTACTTTATA-------TCTTATCTAAAAACTAGACTGAATCTCTTGAACTCGCACA-----AGATGAAGACGATGTAGCTCTCTCTCCCTT----CTTTTCAATCATCAATAAACTTTCAGTGGGC--AGAGCACATTTCTGTAATTTTATGGAGGTGATAATTATCCTTCTAGTCACTGAAAAATTAACTCTACACACCATTAATGGC i otoGar3.GL873575 C 0 I 1567 s canFam3.chr1 56115973 891 + 122678785 TGATTTACTGTGATCCAATT-TCATCCAAGTATGGAAGCTTGGGCTTTTCCTTCCAACCTACCACCCACTTGGATAG-AAGATCTT--CAGCCTCTTTTTGGGGGCAAAGCATACGAATACATTGAGATGTTTGGA-AGATTGGATAATCAGAAGGAGCTCTGAGAAGGGTCTGTGCAA-TATCCACATGAGAGAAAAGAACGTTTGAAATAAATTGCCAGAGACATCATTACTGACGT-GTCGAAGCTTTAACtaaattaaagataattttttagaattaattataaatGCATGAAATTAGCCTT------------------CTTTTCTA---------TGCACGCGATTTATGACTTGATGATTCCCTTGCAAACTTCA---TTTGCAAA-ATATTTTAAAGTTTATTAAGCCCTTTGACAAATACTGTGTCTTGATATAATCATTTCATTACCAAATTTTGGATGTCTGCTTGTCCCTCATTCTCTCACAT----CT----CCCTGAG----TCTAGTT-----------GACTGGTGTGCTTCC--TTTAGAAATCTTTGCAATGATGTTTATTGTGACATTAACTGTAAGGAAATAACCAAAGCAGAAACAGAATATGGCTCCAGACATGACATTTTAACATGCTGTGG---AAAATTGTCTTTGTATTTTATTTGGTTTGCATTTTATTTGCTATTTTCAAAAG--------TTAAATACCACATTAAAAAA--ATGAGGAA--GAGAATTTTGACAA--------GTATAAACATCTCTGACCTTTCTACTTAATAGTTATATTCCCATCTGGCCA-GGGAGAAAATCTATTGAATACATATGAATTCAGA-GAAGATTCTGTGG-GGTGTCTCTC------CTTG---GTCATCAGTGAACAGCCAGTGGGC--GACAGGTGCT--CGTCATTCCATGGAGATA-----------CTTAGTCTCCAAAGAGTTCACTCCATTCATTGTAAAGCAC i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 485474 920 + 760995 TGATTTACTGTGATTCATTTGCCATCCAAATATGGGAACCTGGGTTTTCCCATGAATTACACTGCCCACTTGTTTTTGAAGATCTCTGCATTTTG-TTTTTTGAGCAAGGTAT--------TTTGTGCAGTGTTTAAAGATTGGATAATCAGATGGAGTTGTGCAAAATATCTTTATAATTATCCACATTGGAGTAAATAATTCTTGAAATAAATTGTTTGAGACATCATTACTGGCGTGGTTGAAACCTTAACTAAATTAAAGGTTATTTGTTAGAAGTGATTGAATATCCATGAAATAAGCATT------------------CTTTCCTG-TATCTGTATACACATGTCCAGTAAGTTGGT-GATTCCTTT-ACAAACTGGATTTTGCAAAGTATTTTTAAAATGTATTATGTTCTTTGAGAAAAATTATGCCTTAATAGAATTATTCCTTCACCAAAGA-TGGAAAACTGTTGTCCTCACATTCTAT-TCATTTCTCTTTCACTCTTGGATATTTTAGTCTTTTAGGAAAATATTAACATTCTTTTT-TCCATCAGTCT-TTTTATCATGTTTACTGTGAAA-------TAATGAAATTATGTAAGCATAGACAAATTGTAGTTTCAATCATAAAATTTCAATA---TGTGGCAAAAGAATGGAT----------TGTGCTATGCattttattta--attttcaaaaaaataattttCAAGCACTGCATTTTTTAA--ATGA-GAAATCACAGTTATGACAGCAGAAGTAACTAAAATATCTCTGACCTTTCTACTTCTTGGCTGTATTCTTGTCTTGCAAATAG-CCAAATCTATTGAATATATACAAAG--AAAGGAAGAGTATGCAG----------CTT----TACT---GTCCTCAGTAGCCTATTA-TGGGCAAAAAAAGTCTTCCCATAATTCCATGGTAGTAATAACTA----TTCAGTCACTGAAAAATTAGATCCTTACCTCATAAATAGT i dasNov3.JH569188 C 0 C 0 a score=5303454.000000 s hg38.chr6_KB021644v2_alt 18789 539 + 185823 TAATA-------------GGAACAGGTATGCTATTTAAGTCA-TT-TGCACTTGTGTGTGTTTGTAAGAACTTACGTATAAAATG---TTCCTAGTAGATTTTAAAAATGATATTATTTTAATATGAAATTGGCTAGTGAAGTTCTAGAGAATTAATGTTTACATTTTGACAACCAAATTCCTTATGTACTTTACATGTGTTTACTTAAAAGTCTTACAAAATAGAATTTGCCCTTCTTATGCTTTTT-AAATTGAAGGCATGAAAA-TAATTTGGTCCTT-TTCATGGAGATTTGGGATGAATCTGAACACTTATTCTTGCACTGTGCTG-CACC-CACATTCTGCTCTCATTTGCTCTTCACGTTTTCAGATCGCTGTTCCTGTCTCTGCACTTGAATTAACTGTAGAGAGTGAGGCAGTCTCCAAAACCTTCCCACCACCCTGTTATTC--TGTTGTTTTTCTGTTTCTGTGATTTGAGAAGTCCTGGAACTAAGCTTTATGCTGAGTCTATGTTACACAACTGT-------GTGTGGAATGAACTCTCATCAAGACCTCC--------------------------------------CGTGAAG s panTro5.chr6 173487075 539 + 175400573 TAATA-------------GGAAGAGGTATGCTATTTAAGTCA-TT-TGCACTTGTGTGTGTTTGTAAGAACTTACGTATAAAATG---TTCCTAGTAGATTTTAAAAATGATATTATTTTAATATGAAATTGGCTAATGAAGTTCTAGAGAATTAATGTTTACATTTTGACAACCAAATTCCTTATGTACTTTACATGTGTTTACTTAAAAGTCTTACAAAATAGAATTTGCCCTTCTTATGCTTTTT-AAATTGAAGGCATGAAAA-TAATTTGGTCCTT-TTCATGGAGATTTGGGATGAATCTGAACGCTTATTCTTGCACTGTGCTG-CACC-CACATTCTGCTCTCATTTGCTCTTCACGTTTTCAGATCCCAGTTCCTGTCTCTGCACTTGAATTAACTGTAGAGAGTGAGGCAGTCTCCAAAACCTTCCCACCACCCTGTTATTC--TGTTGTTTTTCTGTTTCTGTGATTTGAGAAGTCCTGGAACTAAGCTTTATGCTGAGTCTATGTTACACAACTGT-------GTGTGGAATGAACTCTCATCAAGACCTCC--------------------------------------CGTGAAG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171737118 539 + 173848474 TAATA-------------GGAACAGGTATGCTATTTAAGTCA-TT-TGCACTTGTGTGTGTTTGTAAGAACTTACGTATAAAATG---TTCCTAGTAGATTTTAAAAATGATATTATTTTAATATGAAATTGGCTAATGAAGTTCTAGAGAATTAATGTTTACATTTTGACAACCAAATTCCTTATGTACTTTACATGTGTTTACTTAAAAGTCTTACAAAATAGAATTTGCCCTTCTTATGCTTTTT-AAATTGAAGGCATGAAAA-TAATTTGGTCCTT-TTCATGGAGATTTGGGATGAATCTGAACGCTTATTCTTGCACTGTGCTG-CACC-CACATTCTGCTCTCATTTGCTCTTCACGTTTTCAGATCCCAGTTCCTGTCTCTGCACTTGAATTAACTGTAGAGAGTGAGGCAGTCTCCAAAACCTTCCCACCACCCTGTTATTC--TGTTGTTTTTCTGTTTCTGTGATTTGAGAAGTCCTGGAACTAAGCTTTATGCTGAGTCTATGTTACACAACTGT-------GTGTGGAATGAACTCTCATCAAGACCTCC--------------------------------------CGTGAAG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11422246 539 - 12463322 TAATA-------------GGAACAGGTATGCTATTTAAGTCA-TT-TGCACTTGTGTGTGTTTGTAAGAACTTACGTATAAAATG---TTCCTAGTAGATTTTAAAAATGATATTATTTTAATATGAAATTGGCTAATGAAGTTCTAGAGAATTAGTATTTACATTTTGACAACCAAATTCCTTATGTACTTTACATGTGTTTACTTAAAAGTCTTACAAAATAGAATTTGCCCTTCTTATGCTTTTT-AAATTGAAGGCATGAAAA-TAATTTGGTCCTT-TTCATGGAGATTTGGGATGAATCTGAACGTTTATTCTTGCACTGTGCTG-CACC-CACATTCTGCTCTCATTTGCTCTTCACGTTTTCAGATCCCTGTTCCTGTCTCTGCACTTGAATTAACTGTAGAGAGTGAGGCAGTCTCCAAAACCTTCCCACCACCCTGTTATTC--TGTTGTTTTTCTGTTTCTGTGATTTGAAAAGTCCTGGAACTAAGCTTTATGCTGAGTCTATGTTACACAACTGT-------GTGTGGAATGAACTCTCATCAAGACCTCC--------------------------------------CGTGAAG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156248372 538 + 157873769 TAATG-------------GGAACAGGTATGCTATTTAAGTCA-TT-TGCACTTGTGTGTGTTTGTAAGAACTGACGTATAAAATG---TTCCTAGTAGATTTCAAAAATGATATTATTTTAATATGAAATTGGCTAATGAAGTTCTAGAGAATTAATATTTACATTTTGACGACCAAATTCCTTATGTACTTTACATGTGTTTACTTAAAAGTCTTACAAAATAGAATTTGCCCTTCTTATGCTTTTT-AAATTGAAGGCATGAAAA-TAATTTGGTCCTT-TTCATGGAGATTTGGGATGAATCTGCACGCTTATTCTTGCACTGTGCTG-CACC-CACATTCTGCTCTCATTTGCTCTTCATGTTTTCAGATCCTTGTTCCTGTCTCTGCACTTGAATTAACCATAGAGAGTGAGGCAGTCACCAAAACCTTCCCACCACCCTGTTTTTC--TGTTGCTTTTCTGTTTCTGTGATTTGAGAAGTCCTGGAACTAAGCTTTATGCTGAGTCTATGTTACACAACTGT-------GTGTGGAATGAACTCTCATCAAGACCTCC--------------------------------------CGTGAA- i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170274468 538 + 172585720 TAATG-------------GGAACAGGTATGCGATTTAAGTCA-TT-TGCACTTGTGTGTGTTTGTAACAACTTATGTATAAAATG---TTCCTACTAGAGTTCAAAAATGATATTATTTTAATGTGAAATTGGCTAGTGAAGTTCTAGAGAATTAATATTTACATTTTGACAACCAAATTCCTTATGTACTTTACATGTGTTTACTTAAAAGCATTACAAAATAGAATTTGCCCTTCTTATGCTTTTT-AAATTGAAGGCATGAAAA-TAATTTGGTCCCT-TTCATGGAGATTTGGCATGAATCTGAATCCTTATTCTTGTGCTGTGCTG-CACC-CACATTCTGCTCCCATTTGCTCTTCACGTTTTCAGATCCCTGTTCCTGTCTCTTCACTTGAATTAACTGTAGAGAGTGAGACAGTCTCCAAAACCTTCCCACCACCCTGTTATTC--TGTTGCTTTTCTGTTTCTGTGATTTGAGAAGTCCTCGAACTAAGCTACGTGCTGAGTCTATGTTACACAACTGT-------GTGTGGGATGAACTCTCATCAAGACCTCC--------------------------------------CGTGGG- i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169020077 538 - 170955103 TAATG-------------GGAACAGGTATGCGATTTAAGTCA-TT-TGCACTTGTGTGTGTTTGTAACAACTTATGTATAAAATG---TTCCTACTAGAGTTCAAAAATGATATTATTTTAATGTGAAATTGGCTAATGAAGTTCTAGAGAATTAATATTTACATTTTGACAACCAAATTCCTTATGTACTTTACATGTGTTTACTTAAAAGCATTACAAAATAGAATTTGCCCTTCTTATGCTTTTT-AAATTGAAGGCATGAAAA-TAATTTGGTCCCT-TTCATGGAGATTTGGCATGAATCTGAATCCTTATTCTTGTGCTGTGCTG-CACC-CACATTCTGCTCCCATTTGCTCTTCACGTTTTCAGATCCCTGTTCCTGTCTCTTCACTTGAATTAACTGTAGAGAGTGAGACAGTCTCCAAAACCTTCCCACCACCCTGTTATTC--TGTTGCTTTTCTGTTTCTGTGATTTGAGAAGTCCTCGAACTAAGCTACGTGCTGAGTCTATGTTACACAACTGT-------GTGTGGGATGAACTCTCATCAAGACCTCC--------------------------------------CGTGGG- i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8307314 538 + 10161646 TAATG-------------GGAACAGGTATGCGATTTAAGTCA-TT-TGCACTTGTGTGTGTTTGTAACAACTTATGTATAAAATG---TTCCTCCTAGAGTTCAAAAATGATATTATTTTAATGTGAAATTGGCTAATGAAGTTCTAGAGAATTAATATTTACATTTTGACAACCAAATTCCTTATGTACTTTACATGTGTTTACTTAAAAGCATTACAAAATAGAATTTGCCCTTCTTATGCTTTTT-AAATTGAAGGCATGAAAA-TAATTTGGTCCCT-TTCATGGAGATTTGGCATGAATCTGAATCCTTATTCTTGTGCTGTGCTG-CACC-CACATTCTGCTCCCATTTGCTCTTCACGTTTTCAGATCCCTGTTCCTGTCTCTTCACTTGAATTGACTGTAGAGAGTGAGACAGTCTCCAAAACCTTCCCACCACCCTGTTATTC--TGTTGCTTTTCTGTTTCTGTGATTTGAGAAGTCCTCGAACTAAGCTACGTGCTGAGTCTATGTTACACAACTGT-------GTGTGGGATGAACTCTCATCAAGACCTCC--------------------------------------CGTGGG- i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1336879 535 + 3144229 TAATG-------------AGAACAGGTATATGATTTAAGTCA-TT-TGCACTTGTGTGTGTTTGTAACAACTTATGTATAAAATG---TTCCTACTAGAGTTCAAAAATGATATTATTTTAATGTGAAATTGGCTAATGAAGTTCTAGAGAATTAATATTTACATTTTGACAACCAAATTCCTTATGTACTTTACATGTGTTTACTTAAAAGCATTACAAAATAGAATTTGCCCTTCTTATGCTTTTT-AAATTGAAGGCATGAAAA-TAATGTGGTCCCT-TTCATGGAGATTTGGCATGAATCTGAATCCTTATTCTTGTGCTGTGCTG-CACC-CACA--CTGCTCCCATTTGCTCTTCACGTTTTCAGATCCCTGTTCCTGTCTCTTCACTTGAATTAACCGTAGAGAGTGAGACAGTCTCCAGAACCTTCCCACCA-CCTGTTACTC--TGTTGCTTTTCTGTTTCTGTGATTTGAGAAGTCCTTGAACTAAGCTACGTGCTGAGTCTATGTTACACAACTGT-------TTGTGGAATGAACTCTCATCAAGACCTCC--------------------------------------CGTGGG- i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96616176 535 + 98384682 TAATG-------------GGAACAGGTATGCGATTTAAGTCA-TT-TGCACTTGTGTGTGTTTGTAAGAACCTATGTATAAAATG---TTCCTACTAGATTTCAAAAATGATATTATTTTAATACAAAATTGGCTAATGAAGTTCTAGAGAATTAATATTTACATTTTGACAACCAAATTCCTTATGTACTTTACATGTGTTTACTTAAAAGCATTACAAAATAGAATTTGCC---CTTATGCTTTTT-AAATTGAAGTCATGAAAA-TAATTTGGTCCTT-TTCATGGAGATTTGGCATGAATCTGAATCCTTATTCTTGTGCTGTGCTG-CACC-CACATTCTGCTCCCATTTGCTCTTCACGTTTTCAGATCCCTGTTCCTGTCTCTTCACTTGAATTAACTGTAGAGAGTGAGACAGTCTCCAAAACCTTCCCACCACCCTGTTATTC--CGTTGCTTTTCTGTTTCTGTGATTTGAGAAGTCCTTGAACTAAGCTACGTGCTGCGTCTATGTTACACAACTGT-------GTGTGGAATGAACTCTCATCACGACCTCC--------------------------------------CATGGG- i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8158913 537 - 10857215 TAATG-------------GGAACAGGTATGTGATTTAAGTCA-TT-TGCACTTGTGTGTGTTTGTAACAACTTATGTATAAAATG---TTCCTACTAGAGTTCAAAAATGATATTATTTTAATGTGAAATTGGCTAATGAAGTTCTAGAGAATTAATATTTACATTTTGACAACCAAATTCCTTATGTACTTTACATGTGTTTACTTAAAAGCATTACAAAATAGAATTTGCCCTTCTTATGCTTTTT-AAATTGAAGGCGTGAAAA-TAATTTGGTCCCT-TTCATGGAGATTTGGCATGAATCTGAATCCTTATTCTTGTGCTGTGCTG-CACC-CACATTCTGCTCCCATTTGCTCTTCACGTTTTCAGATCCCTGTTCCTGTCTCTTCACTTGAATTAACCGTAGAGAGTGAGACAGTCTCCAGAACCTTCCCACCA-CCTGTTACTC--TGTTGCTTTTCTGTTTCTGTGATTTGAGAAGTCCTTGAACTAAGCTACGTGCTGAGTCTATGTTACACAACTGT-------GTGTGGAATGAACTCTCATCAAGACCTCC--------------------------------------CGTGGG- i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15554879 538 - 23502949 TAATG-------------GGAACAGGTATGCTATTTAAGTCA-TT-TGCACTTGTGTGTGTTTGTAAGAACTTATGTATAAAATG---TTCCTACTAGATTTCAAAAATGATATTATTTTAATATGAAATTGGCTAATGAAGTTCTAGAGAATTAATATTTACATTTTGACAACCAAATTCCTTATGTACTTTACATGTGTTTACTTAAAAGCGTTACAAAATAGAATTTGCCCTTCTTATGCTTTTT-AAATTGAAGGCATGAAAA-TAATTTGGTCCTT-TTCATGGAGATTTGGCATGAATCTGAATCCTTATTCTTGTGCTGTGCTG-CACC-CACATTCTGCTCCCATTTGCTCTTCACATTTTCAGATCCCTGTTCCTGTCTCTTCACTTGAATTAACCATAGAGAGTGAGACAGTCTCCAAAACCTTCCCACCACCCTGTTATTC--TGTTGCTTTTCTGTTTCTGTGATTTGAGAAGTCCTCGAACTAAGCTATCTGCTGAGCGTATGTTACACAACTGT-------GTGTGGAATGAACTCTCATCAAGACCTCC--------------------------------------CGTGGG- i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169822814 551 + 171630274 TAACG-------------GGAACAGGTATGTGATTTAAGTCA-TT-TGCACTTGTGTGTGTTTGCAAGAACTTACGTAGAAAATG---TTCCTACCAGATTTCAAAAATGATATTATTTTAATATGAAACTGGCAAATGAAGCTCTAGGGAATTAATAGTTACCTTCTGACTACCAAATTCCTTCTATACTTTACATGTGTTTACCTAAAAACATTATAAAATAGACTTTGCCCTTCTTATGCTTTTT-AAATTGAAGGCATGAGGA-TAATGCGGTCCTT-TTCATGGAGATTTGGGATGAACCTGAACCCTCATTGTTGAGCTGTGTGG-CACC---CAGTCTGCTCTCTTTTGCTCC-------------TCCCTGTTTCTGCCTCTGC------CTTAACCGTAGCGAGTGAGGCAGTCTCCACAACCTTCCCACCACGCTGTTATTC--TCTGGCTTTCCTGTTTCCGTGATTTGAGAAGTCCTGGAA-TAATCTATACGCTGTGTCTACGTTACACAACTAT-------GTGTGGAATGAACTC---TCAAGACCTCCCGTGGGCCTGGAGGTGGCATGTGGGACTGGAGGTGGCACGTAGG- i calJac3.chr4 C 0 I 3 s saiBol1.JH378287 1246990 507 - 2905041 TAACG-------------GTAACAGGTATGCTATTTAAGTCA-TT-TGCACTTGTGTGTGCTTGTAAGAACTTAGATATAAAATG---TTCCTACGAGATTTCAAAAATGATATTATTTTAATATGAAACTGGCAAATGAAGCTCTAGAGAATCAGTAGTTACATTTTGACTACCAAATTCCTTATATACTTTACATGTGTTTACTTAAAAGCATTACAAAATAGACTTTGCCCTTCTTACCCTTTTT-AAATTGAAGGCGTGAGAA-TAAT--GGTCATT-TTCATGGGGACTTGGGGTGAGCCTGAGCCCTCATTCCCTTGCTGTGCTG-CACC-CACAGGCTGCTCTCTTCTGCTCT-------------TCCCTGTTTCTGTCTCTGC------CTTCACTGTAGCGAGTGACACAGTCTCCACAACCTTCCCACCACCCTGTCACTC--TGCTGCTTTCTTGTTTCCGTGATTTGAGAAGTGCTGGAA-TAATCTATATGCTGTGTCTACGTTACACAACTGT-------GTGTGGAACGAACTC---TCAAGACCTCC--------------------------------------------- i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1198054 515 - 2164891 TAACA-------------GGAACAGGTATGCTATTTAAGTCA-TT-TGCACTTGTGTGTGTTTGTAAGAACTTACGTATAAAATG---TTCCTACTAGATTTCAAAAATGATATTATTTTAATATGAAACTGGCAAACGAAGCTCTAGAGAATTAATGGTTACCTTTTGACTATCAAATTCCTTATATACTTTACATGTGTTGACTTAAAAGCATTACAAAATAGTCTTTGCCCTTCTTATGCTTTTT-AAATTGAAGGCGTGAGAA-TAATGTGGTCCTT-TTCATGGAGACTTGGGATGAACCTGAAGCCTCGTTCCTGCGCTGTGCTG-CACC-CACAGTCTGCTCTCTTTTGCTCT-------------TCCCTGTTTCTGTCTCTGC------CTTAACCGTAGAGAGTGACGCAGTCTCCACAACCTTCCCACCACCCTGTTATTC--TGTTGCTTTCCTGTTTCCGTGATTTGAGAAGTCCTGGAA-TAATCTGTAAGCCGCATCTGTGTTACACAACTGT-------GTGTAGAACGAACTC---TCAAGACCTCC--------------------------------------CGTGGG- i cebCap1.NW_016107695v1 C 0 I 3 s aotNan1.NW_018494782v1 1444758 508 - 1813869 TAACG-------------GGAACAGGTATGCTATTTAAGTCA-TT-TGCACTTGTGTGTGTTTGTAAGAACTTACGTATAAAATG---TTCCTACTAGATTTCAAAAATGATATTATTTTAATATGAAACTGGCAAATGAAGCTCTAGAGAATTAATAGTTACCTTTTGACTACCAAATTCCTTATA-----TACATGTGTTTACTTAAAAGCATTACAAAATAGACTTTGCCCTTCTTATGCTTTTT-AAATTGAAGGCATGGGAA-TAATGTGGTCCTT-TTCATGGAGATTTGGGATGAAGCTGAACGCTCATTCTTGCGCTGTGCTG-CACC---CAGTCTGCTCTCTTTTGCTCT-------------TCCCTGTTTCTGTCTCTGC------CTTAACCGTAGAGAGCGAGGCCGTCTCCACAACCCTCCCACCACCCTGTCATTC--TGCTGCTTTCCTGTTTCCGTGATTTGAGAAGTCCTGGAA-TCATCTATGCGCCGCGTCTATGTTACACAACCGT-------GCGTGGAAGGAACTC---TCAAGACCTCC--------------------------------------CGTGGG- i aotNan1.NW_018494782v1 C 0 I 33 s canFam3.chr1 56116864 497 + 122678785 TAATA-------------GCAGCAAAT-----ATTGCAGTCGTTT-TGCACTTCTTTCTACCTGTAACAGCTTACATATAAGGTA---TTCCTATTAGATTTCATAAATGACATCAG--------AAGAATTGCAAGTACCATTCGGGGGGACCAATATTTCCGTTTTCACTACC-AACCCCATGTATACTTTAACTATGTTTGCTTAAAAGCATTA-ACAATGCAATGTCCTCTTCTTGCACTTTTA-AAATCGAAGGCCTCAAAG-TAATAAATCTGTT-TTCATGGATGTTTG---TAACTGCGAACAGCCGTTCTCATGTGATGCTGTCACA-CACGATCTGTTGTCTTCTCTGGTTTACTTTTTCAGATTTCTGGTTCTGCTGTTGGGAC---CTCAGCTGTTCGGAGTGAGGCTGCCTCTAAAATCCT-----CACCTCGTTTCTCTTTGTTGTGTCTCAGTTTCTGTGATTTGAGAAAGTCT-GAACCAAGCTCCGTGGCCGATCCCTGAGTCAGGTCCGT-------TCGGGGAG-----------------CTCC--------------------------------------ACTGA-- i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 486394 455 + 760995 TACTAGACACAGGCATGTGAAGCAGGCATGCTATTGAAATAA-TTGTATACTGATAAATATCTATACTAGCTTACATATAATATGATATTCCTATTAGATTTCAAAAA----------------------------------------------------TAGATTTCAACTATCACATCCCttatatattttaaatacattttattaaaaGCATTCAAATATATAGTGCACTCTTCTCATGCCTTTTAAAATTTAAGGCATCAAAATTAATTTAATCCCTCTTCAAGGAGATTTAGGATAACTTTGAAAAACCATTCTTGCACTGTGGTT-TAAAATCCATTTTGTTTTCATTTTCCTTTTAGTTTTTCAGATTCCTACTTCTGAC----------------------------------------------CACCATTACCCTTTCAGTT--TGTTGCTTTTCAATGTCTGGTATTCGAGAAATTCT-GAACTAAGCTCAACACCAAATCTATGTTATGTAACTGTCCCAGCAGCTCTGTGTAAGAGTTTGTCAAG--------------------------------------------------- i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10913867 1567 - 12073884 I a score=96719.000000 s hg38.chr6_KB021644v2_alt 19328 34 + 185823 GGAGGTGG--AGTGCCCCTGGTGGTGGCACGTGGAC s panTro5.chr6 173487614 34 + 175400573 GGAGGTGG--AGTGCCCCTGGTGGTGGCACACGGAC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171737657 34 + 173848474 GGAGGTGG--AGTGCCCCTGGTGGTGGCACACGGAC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11422785 34 - 12463322 GGAGGTGG--AGTACCCCTGGAGGTGGCACGCGGAC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156248910 20 + 157873769 ----------------CCTGGAGGTGGCACGCGGAG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170275006 20 + 172585720 ----------------CCTGGAGGTGGCAAGCGGAC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169020615 20 - 170955103 ----------------CCTGGAGGTGGCACGCGGAC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8307852 20 + 10161646 ----------------CCTGGAGGTGGCACGCGGAC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1337414 20 + 3144229 ----------------CCTGGAGGTGGCACGCGGAC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96616711 20 + 98384682 ----------------CCTGGAGGTGGCACGCGGAC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8159450 20 - 10857215 ----------------CCTGGAGGTGGCACGCGGAC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15555417 20 - 23502949 ----------------CCTGGAGGGGGCACGCGGAC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169823368 30 + 171630274 GCAGGTGGCACGTGGGCCTGGAGGTGGCAC------ i calJac3.chr4 I 3 C 0 s saiBol1.JH378287 1247497 20 - 2905041 ----------CCTGGGCCTGCAGGTGGCAC------ i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1198572 30 - 2164891 GCAGGTGGCACGTGGGCCTGGAGGTGGCAC------ i cebCap1.NW_016107695v1 I 3 C 0 s canFam3.chr1 56117361 34 + 122678785 GGAGTTGT--CGCAGGCCTGGCCTTCGCACGGGGAC i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 486849 22 + 760995 --------------GGACCAGCTAGACCACGTGAAA i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10913867 1567 - 12073884 I e aotNan1.NW_018494782v1 1445266 33 - 1813869 I a score=5553184.000000 s hg38.chr6_KB021644v2_alt 19362 570 + 185823 TCAGTGGTGTGCCAACTCAAGGGTGCCCAGGTATTT-----CCCATC-----GTTCAGGGCTGGGTCTCTGCTGGAAGAGTTGAAGTGATGGGAAAGCTGGCTTCCAGAAAAA-GAGGGAATTGTAATGTCACGCCATCCACATTCTCCTT-GTTTCTTCTAATCGC-TTGCAGTCCCAGCTCCATGACAAGGTTTGTGACACCAGCGTTTGCTTTAATGTTGAATA-ACATGAAATACTTACAATAGCAAACCTTATGTTATTCTGGCTTACATTACAGTTTCATGTGGCTTTAtatttattcttatttatttaatttatttgatcataaattatcaattgatttTAATATTCTAAATTTCTCTTCCTCCACCCTTCGTTAAATAATTAGTGAACAAGT-AAAGGATATGGAAATGTAATGGGTGGTTTACTACCTTAGAGATATTTCTTTA--CTCT---GAGTTCCTCATTTATTTTACCAGTTTGA-TCTTAACACACTGAGG-TTTTTTAAAGGAATATAACTTTAATCCTAAATGCTTTCTGTAATATTAGG----TAGCAGAAATAAAGACCTA-tgtttatgtgtg----ta--------------t s panTro5.chr6 173487648 570 + 175400573 TCAGTGGTGTGCCCACTCAAGGGTGCCCAGGTATTT-----CCCATC-----GTTCAGGGCTGGGTCTCTGCTGGAAGAGTTGAAGTGATGGGAAAGCTGGCTTCCAGAAAAA-GAGGGAATTGTAATGTCACGCCATCCACATTCTCCTT-GTTTCTTCTAATCGC-TTGCAGTCCCAGCTCCATGACAAGGTTTGTGACACCAGCGTTTGCTTTAATGTTGAATA-ACATGAAATACTTACAATAGCAAACCTTATGTTATTCTGGCTTACATTACAGTTTCATGTGGCTTCAtatttattattatttatttaatttatttgatcataaattatcaattgatttTAATATTCTAAATTTCTCTTCCTCCACCCTTCGTTAAATAATTAGTGAACAAGT-AAAGGATATGGAAATGTAATGGGTGGTTTACTACCTTATAGATATTTCTTTA--CTCT---GAGTTCCTCATTTATTTTACCAGTTTGA-TCTTAACACACTGAGG-TTTTTTAAAGGAATATAACTTTAATCCTAAATGCTTTCTGTAATATTAGG----TAGCAGAAATAAAGACCTA-tgtttatgtgtg----tg--------------t i panTro5.chr6 C 0 C 0 s panPan2.chr6 171737691 570 + 173848474 TCAGTGGTGTGCCCACTCAAGGGTGCCCAGGTATTT-----CCCATC-----GTTCAGGGCTGGGTCTCTGCTGGAAGAGTTGAAGTGATGGGAAAGCTGGCTTCCAGAAAAA-GAGGGAATTGTAATGTCACGCCATCCACATTCTCCTT-GTTTCTTCTAATCGC-TTGCAGTCCCAGCTCCATGACAAGGTTTGTGACACCAGCGTTTGCTTTAATGTTGAATA-ACATGAAATACTTACAATAGCAAACCTTATGTTATTCTGGCTTACATTACAGTTTCATGTGGCTTCAtatttattattatttatttaatttatttgatcataaattatcaattgatttTAATATTCTAAATTTCTCTTCCTCCACCCTTCGTTAAATAATTAGTGAACAAGT-AAAGGATATGGAAATGTAATGGGTGGTTTACTACCTTATAGATATTTCTTTA--CTCT---GAGTTCCTCATTTATTTTACCAGTTTGA-TCTTAACACACTGAGG-TTTTTTAAAGGAATATAACTTTAATCCTAAATGCTTTCTGTAATATTAGG----TAGCAGAAATAAAGACCTA-tgtttatgtgtg----tg--------------t i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11422819 570 - 12463322 TCAGTGGTGTGCCCACTCAAGGGTGCCCAGGTATTT-----CCCATC-----GTTCAGGGCTGGGTCTCTGCTGGAAGAGTTGAAGTGATGGGGAAGCTGGCTTCCAGAAAAA-GAGGGAATTGTAATGTCACGCCATCCACATTCTCCTT-GTTTCTTCTAATCGC-TTGCAGTCCCAGCTCCATGACAAGGTTTGTGACACCAGCGTTTGCTTTAATGTTGAATA-ACATGAAATACTTACAATAGCAAACCTTATGTTATTCTGGCTTACGTTACAGTTTCATGTGGCTTTAtatttattcttatttatttaatttatttgatcataaattatcaattgatttTAATATTCTAAATTTCTCTTCCTCCACCCTTCGTTAAATAATTAGTGAACAAGT-AAAGGATATGGAAATGTAATGGGTGGTTTACTACCTTATAGATATTTCTTTA--CTCT---GAGTTCCTCATTTATTTTACCAGTTTGA-TTTTAACACACTGAGG-TTTTTTAAAGGAATATAACTTTAATCCTAAATGCTTTCTGTAATATTAGG----TAGCAGAAATAAAGACCTA-TGTTTAtgtgtg----tg--------------t i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156248930 571 + 157873769 TCAGTGGTGTGCCAACTCAAGGGTGCCCAGGTATTT-----CCCATC-----GTTCAGGGCTGGGTCTCTGCTGGAAGAGTTGAAGTGATGGGAAAGCTGGCTTCCAGAAAAA-GAGGGAATTGTAATGTCACGCCATCCACATTCTCCTT-GTTTCTTCTAAGCGC-TCGCAGTCCCAGCTCCATGACAAGGTTTGTGACACCAGAGTTTGCTTTAATGTTGAATA-ACATGAAATACTTAAAATAGCAAACCTTATGTTATTCTGGCTTACATTACAGTTTCATATGGCTTTAtatttattcttatttatttaatttatttgatcataagttatcaattgatttTAATATTCTAAATTTCTCTTCCTCCACCCTTCGTTAAATAATTAGTGAACAAGT-AAAGGATATAGAAATGTAATGGGTGGTTTACTACCTTATAGATATTTCTTTA--CTCT---GAGTTCCTCATTTATTTTACCAGTTTGA-TTTTAACACACTGAGGTTTTTTTTAAGGAATATAAGTTTAATCCTAAATGCTTTCTGTAATATTAGG----TAGCAGAAATAAAGACCTA-TTTTTAtgtgtg----tg--------------t i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170275026 566 + 172585720 TCAGTGTTGTGCCAACTCAAGGGTGCCCAGGTGTTT-----CCCATC-----GTTCAGGGCTGGATCTCTGCTGGAAGAGTTGAAGTGATGGGAAAGCTGGCTTCCAGAAGAA-GAAGAAATTCTAGTGTCACACCATCCGTATTCTCCTT-GTTTCTTCTAATCGC-TCACTGTCCCAGCTCCATGACAAGGTTTGTGACACCAGTGTTTGCTTTAATGTGGAATA-ACATGAAATACTTAAAATAGCAAACCTTACGTTATTCTGGCTTACATTACAGTTTCATGTGGCTTTATATTTATTCTT----ATTTAATTTATTTGATCATAAATTATCAATTAATTTTAACATTCTAAATTTCTCTTTCTCCATCCTTCGTTAAATAATTACTGAACAAGT-AAAGGATATAGAAATGTAATGGATGGTTTACTACTTTATAGATATTTCTTTA--CTCT---GAGTTCCTCGTTTATTTTGCCAGTTTGA-TTTTAACACATTGAGG-TTTTCTCAAGGAATATAACTTCAATTCTAAATGCTTTCTGTAATATTAGG----TAGCAGAAATAAAGACCTA-TTTTTAtgtgtg----tg--------------t i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169020635 566 - 170955103 TCAGTGTTGTGCCAACTCAAGGGTGCCCAGGTGTTT-----CCCATC-----GTTCAGGGCTGGATCTCTGCTGGAAGAGTTGAAGTGATGGGAAAGCTGGCTTCCAGAAGAA-GAAGGAATTCTAGTGTCACACCATCCGTATTCTCCTT-GTTTCTTCTAATCGC-TCGCTGTCCCAGCTCCATGACAAGGTTTGTGACACCAGTGTTTGCTTTAATGTGGAATA-ACATGAAATACTTAAAATAGCAAACCTTACGTTATTCTGGCTTACATTACAGTTTCATGTGGCTTTATATTTATTCTT----ATTTAATTTATTTGATCATAAATTATCAATTAATTTTAACATTCTAAATTTCTCTTTCTCCATCCTTCGTTAAATAATTACTGAACAAGT-AAAGGATATAGAAATGTAATGGATGGTTTACTACTTTATAGATATTTCTTTA--CTCT---GAGTTCCTCGTTTATTTTGCCAGTTTGA-TTTTAACACATTGAGG-TTTTCTCAAGGAATATAACTTCAATCCTAAATGCTTTCTGTAATATTAGG----TAGCAGAAATAAAGACCTA-TTTTTAtgtgtg----tg--------------t i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8307872 566 + 10161646 TCAGTGTTGTGCCAACTCAAGGGTGCCCAGGTGTTT-----CCCATT-----GTTCAGGGCTGGATCTCTGCTGGAAGAGTTGAAGTGATGGGAAAGCTGGCTTCCAGAAGAA-GAAGGAATTCTAGTGTCACACCATCCGTATTCTCCTT-GTTTCTTCTAATCGC-TCACTGTCCCAGCTCCATGACAAGGTTTGTGACACCAGTGTTTGCTTTAATGTGGAATA-ACATGAAATACTTAAAATAGCAAACCTTACGTTATTCTGGCTTACATTACAGTTTCATGTGGCTTTATATTTATTCTT----ATTTAATTTATTTGATCATAAATTATCAATTAATTTTAACATTCTAAATTTCTCTTTCTCCATCCTTCGTTAAATAATTACTGAACAAGT-AAAGGATATAGAAATGTAATGGATGGTTTACTACTTTATAGATATTTCTTTA--CTCT---GAGTTCCTCGTTTATTTTGCCAGTTTGA-TTTTAACACATTGAGG-TTTTCTCAAGGAATATAACTTCAATCCTAAATGCTTTCTGTAATATTAGG----TAGCAGAAATAAAGACCTA-TTTTTAtgtgtg----tg--------------t i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1337434 561 + 3144229 TTAGTGTTGTGCCAACTCAAGGGTGCCCAGGTGTTT-----CCCATC-----GTTCAGGGCTGGATCTCTGCTGGAAGAGTTGAAGTGATGGGAAAGCTGGCTTCCAGAAGAA-GAAGGAATACTAGTGTCACACTATCCGTATTCTCCTT-GTTTCTTCTAATCGC-TCACGGTCCCAGCTCCATGACAAGGTTTGTGACACCAGCGTTTGCTTTAATGTGGAATA-ACATGAAATACTTAAAATAGCAAACCTTACGTTATTCTGGCTTACATTACAGTTTCATGTGGCTTTATATTTATTCTT---------ATTTATTTGATCATAAATTGTCAATTAATTTTAACATTCTAAATTTCTCTTTCTCCATCCTTCGTTAAATAATTACTGAACAAGT-AAAGGATATAGAAATGTAATGGATGGTTTACTACTTTATAGATATTTCTTTA--CTCT---GAGTTCCTCGTTTATTTTGCCAGTTTGA-TTTTAACACATTGAGG-TTTTCTCAAGGAATATAACTTCAATCCTAAATGCTTTCTGTAATATTAGG----TAGCAGAAATAAAGACCTA-Tttttatgtgtg----tg--------------t i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96616731 560 + 98384682 TCAGTGTTGTGCCAACTCAAGGGTGCCCAGGTGTTT-----CCCATA-----GTTCAGGGCTGGGTCTCTGCTGGAAGAGGTGAAGTGATGGGAAAGCTGGCTTCTAGAAAAA-GAAGGAATCGTAGTGTCACACCATCCGTATTCTGCTT-GTTTCTTCTAATCAC-TCACGGTCCCAGCTCCATGGCAAGGTTTGTGACACCAGTGTTTGCTTTAATGTGGAACA-ACATGAAATTCTTAAAATAGCAAACCTGGCGTTATTCTGGCTTACATTACAGTTTCATGTGGTTTTATATTTATTCTT----ATTTAATTTATTTGATCATAAATTACCAATTAATTTTAACATTCTAAATTTCTCTTTCTCTATCCTTCGTTAAATAATTAGGGAACAAGT-AACGGATATAGAAATGTTACGGATGGTTTACTACCTTATAGATATTTCTTTA--CTCT---GAGTTCCTCGTTTATTTTGCCAGCTTGA-TTTTAACACATTGAGG-TTTTCTCAAGGAATATAACTTCAATCCTAAATGCTTTCTGTAATATTAGG----TAGCAGAAATAAAGACCTA-TTTT------TA----Ag--------------t i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8159470 565 - 10857215 TCAGTGTTGTGCCAGCTCAAGGGTGCCCAGGTGTTT-----CCCATC-----GTTCAGGGCTGGATCTCTGCTGGAGGAGTTGAAGTGATGGGAAAGCTGGCTTCCAGAAGAA-GAAGGAATTCTAGTGTCACACCATCTGTATTCTCCTT-GTTTCTTCTAATCGC-TCACGGTCCCAGCTCCATGACAAGGTTTGTGACACCAGCGTTTGCTTTAATGTGGAATA-ACATGAAATACTTAAAATAGCAAACCTTACGTTATTCTGGCTTACATTACAGTTTCATGTGGCTTTATATTTATTCTT----ATTTAATTTATTTGATCATAAATTGTCAATTAATTTTAACATTCTAAATTTCTCTTTCTCCATCCTTCGTTAAATAATTACTGAACAAGT-AAAGGATATAGAAATGTAATGGATGGTTTACTACTTTATAGATATTTCTTTA--CTCT---GAGTTCCTCGTTTATTTTGCCAGTTTGA-TTTTAACACATTGAGG-TTTTCTCAAGGAATATAACTTCAATCCTAAATGCTTTCTGTAATATTAGG----TAGCAGAAATAAAGACCta-tttt-atgtgtg----tg--------------t i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15555437 574 - 23502949 T-AGTGTTGTGCCAACTCAAGGGTGCCCAGGTGTTT-----CCCATC-----GTTCAGGGCTGGGTCTCTGCTGGAAGAGTTGAAGTGATGGGAAAGCTGGCTTCCAGAAAAA-GAAGGAATTGTAGTGTCACACCATCCACATTCTCCTT-GTTTCTTCTAATCGC-TCACGGTCCCAGCTCTATGACAAGGTTTGTGACACCAGTGTTCGCTTTAATGTGGAATA-ACATGAAATTCTTAAAATAGCAAACCTTGCGTTATTCTGGCTTACATTACAGTTTCATGTGGCTTTATATTTATTCTT---------ATTTATTTGATCATAAATTATCAATTAATTTTAACATTCTAAATTTCTCTTTCTCCATCCTTTGTTAAATAATTACTGAACAAGT-AAAGGATGTAGAAATGTAATGAATTGTTTACTACCTTATAGATATTTCTTTA--CTCT---GAGTTCCTCGTTTATTTTGCCAGTTTGA-TTTTAACACATTGAGG-TATTCTCAAGGAATATAACTTCAATCCTAAATGCTTTCTGTAGTATTACG----TAGCAGAAATAAAGACCTA-TTTTTAtgtgtg----tgtgtgtgtgtatgtat i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169823398 550 + 171630274 TCGGTGGTGTGCCATTTCAAGGGTGCTGAGGTATTT-----CCCATT-----GTTGAGACCTGGGCCTCTGCTGGAAGAGTTGAAGTGATGGGAAAGCCAACTTCCAGAAGAA-GAGGGAAAC-TAATGTTACAGCAGCCACATTCGCCTCGGTTTCTTCTAACCACTTCACAGTCCCATGTCCATGACAAAGTTGGTGACACCAGCATTTGCTTTCGTCTTGAATA-ACGTAACATATTTAAAGTAGCAAACCTTATAATATTCTGGCTTACATTAGAGTTTTATATAGCTTTATATTTATTCTT---------ATCTATTTGAGCACAAACTGTCAATTGATTTGAATATTCCAAATTTCTCTTCCTC-TTCTTTCATTAAATGATTAGAGAACAAGT-AAGGGATATGGAAAAGTAATGGGTGGTTTACTACCTCACAGA-AGTTCTTTA---------------CTCATTTATTTTACCAGATAGAGTTTTAACACATTGAGGTTTTTTTTAAGGAATATAACTTTAATCCTAAATCCTTTCTGTGATATTAAG----TAGCAGAAATAAAGACCTATTTTTTATGTGTG--------------------- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1247517 558 - 2905041 TCGGTGGTGTGCCAGCTCAAGGGTGCTGAGGTGTCT-----CCCATT-----GTTGAGAGCTGGGTCTCTGCTGCAAGAGTTGAAGTAATGGAAAAGCCAACTTTCAGAAAAA-GAGGGAACTGTGATGTCACCCCAGCCACATTCCCCTCGGTTTCTTCTGATCACTTCACAGTCCCCTTTCCATGACAAAGTCTGTGACACCAGCGTTTGCTTTCATCTTGAATA-ACATAAAATATTTAAAGTAGCAAACCTTATGTTATTCTGGCTTACATTACAGTTTCATATAGCTTTATATTGATTCTT---------ATTTATTTGATCACAAATTATCAATTGATTTTAATATTCTAAATTTCTCTTCCTC-ATCTTTCATTAAATAATTAGTGAACAA-T-AAAGGATATAGAAAGGTGATGGGTGGTTTACTACCTTAGAGACACTTCTTTA---------------CTCGTTTATTTTACCACGTAGAGTTTTAACACATTGAGGTTTTTTTTAAGGAATATCACTTTAATCCTAAATCCTTTCTGTAATTTTAAG----TAGCAGAAATAAAGACTTATTTTTTTtatgtgtgtgtg--------------t i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1198602 551 - 2164891 TCAGTGGTGTGCCAACTCAAGGGTGCTGAGGTATTT-----CCCATT-----GTTGAGAGCTGGGTCTCTGCTGGAAGAGTTGAAGTGATGGGAAAGCCGACTTCCAGAAAAA-GAGGGAACTGTAATGTCACACCAGCCACATTCCCCTTGGTTTCTTCTGATCACTTCACAGTCCCATCTTCATGACAAAGTTTGTGACACCAGCGTTTGATTTCATCTTGAATA-ACATAAAATATTTAAAGTAGCAAACCTTATATTATTCTGCCTTACATTACAGTTTCATATAGCTTTATATTTATTCTT---------ATCTATTTGATCACAAATTATCAATTGATTTTAATATTCTAAATTTCTCTTCCTC-ATCTTTCATTAAATAATTAGTGAACAAGT-AAAAGATAT-GAAAGGTGATGGGTGGTTTACTACCTTATACATACTTCTTTA---------------TTCATCTATTTTACCAGATAGAGTTTTAACACATTGAGGTTTTTTTTAAGGAATATAAGTTTAATCCTAAATCCTTTCTGTAATTTTAAG----TAGCAGAAATAAAGACCTA-TTTTTAtgtgtg--------------------t i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1445299 546 - 1813869 TCAGTGGTGTGCCAACTCAAGGGTGCTGAGGTATTT-----CCCATT-----GTTGGGAGCTGGGTCTCTGCTGGAAGAGTTGAAGTGATGGGAAAGCCGACTTCCAGAAAAA-GAGGGAACTGTAACGTCACATCAGCCACATTCCCCTTGGTTTCTTGTAATCACTTCACAGTCCCATCTCCATGACAAAGTTTGTGACACCAGCGTTTGCTTTCATCTTGAATA-ACATAAAATATTTAAAGTAGCCAACCTTATATTATTCTGGCTTACATTACAGTTTCACATGCCTTTATACTTATTCTT---------ATTTATTTGAGCACAAATTATCAATTGATTTTAATATTCTAAATTTCTCTTCCTC-ATCTTTCTTTAAATAATTAGTGAACAAGT-AAAGGATATAGAAA-------GGTGGTTTACTACCTTATAGATA-TTCTTTA---------------CTCATTTATTTTACCAGATAGAGTTTTAACACATTGAGG-TTTTTTAAAGGAATATAACTTTAATCCTAAATCCTTTCTGTAATTTTAAG----TAGCAGAAATAAAAACCTATTTTTTAtgtgtg----tg--------------t i aotNan1.NW_018494782v1 I 33 C 0 s canFam3.chr1 56117395 542 + 122678785 ----TGTGTCACCTGTTTCAGGGCACAGACGCGCTC-----CGCTTCCTGGGGTTCGGACTTGAGTCTCT--TGGTGAGACTCCCTTGTTGGACAACTTG----CTCGGGGGC-GAGGGGTCTGCAAAGTTGTGGCACCTAAAG--CCCTG-GTTTCCCCTCATTGTTTCTCCATCCCGGCTCCGGGACGGGTTTTGTGACACTACTATGCACTTTAACGCTGGACACACAGGAAAAACTCAAAATATCCAGTC--ATGGTATTTTTGCTTCCATGACAGTGTCATGTGGTTTTATATTCATTTTT---------TATTAACTTCTCATAAATTATCCATTGATTCTAATATTCCAAACTGCCCTTCCTC-ACCCTCCGCTGCACCA------------T-GAAAGACACGGCA--------GGTGGATTACTACTTTGAGGGTATTTCTTTA--AATTCAGGGGTTCCTCGGTTCTTTTACGAGACCAAATTTTCATACAGTGAGGTTTTCTTCTAAGAGTATAACTTTGATCCTAAATACTTTCTCTAATGTTAGGTACCTACCAGAATTAAGGACCTA-TTTGTATATAGA----GG--------------G i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 486871 565 + 760995 TTGATTGTGT-CTTTTTTAGGGATGAAGAGATTTTTCTTTCCCTATT-----GTT-AGATTCATGGCTCTTATGTAAAGTCTGCAATTACTGGAAGACAGAGCTCCAGAAAAATGGAGTTGTTGAAATGTCACTGTGTCTACATTCCCCTTGATTTCTTCTAGTCATTTGGCAATCTCAATTCCACAATAAGTTTTGTGAT-TTAGTATTTGCTTTGAACTTGGATAAACATGAACTATTTAAAATATTTAATCTTACATGATTTTTGGCTAAGTTGCAGTTTTATGTTGCATTGTATATATTTAT----------TTTCCTTTTCTATAAATTATAAAGTACTTCTAATATTTTTAATTGCTTTGTCTC---CTTAAATTAAATAATTAATGAACATATAAAAGGCTATATAAATATTATGCATGGTTTACTATCTTACAAGTATTATTCTAAACTCT---TGGTTATTCATTTCTTTTATGAGTCTGAAATGCAGTACATTGAACTTTTTTTTTAAGAGTGTAACTTTTATCTTAAATGCTTTCTCTAATTTTAGA----TACCAGAATT-AGGACATA-TTTGTGTATAAA----T---------------- i dasNov3.JH569188 C 0 I 1392 e otoGar3.GL873575 10913867 1567 - 12073884 I a score=74442.000000 s hg38.chr6_KB021644v2_alt 19932 26 + 185823 gtgtatatgtgtgtgtatctgtgtgt s panTro5.chr6 173488218 26 + 175400573 gtgtatatgtgtgtgtatctgtgtgt i panTro5.chr6 C 0 C 0 s panPan2.chr6 171738261 26 + 173848474 gtgtatatgtgtgtgtatctgtgtgt i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11423389 24 - 12463322 gtg--tatgtgtgtgtgtctgtgtgt i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156249501 14 + 157873769 gtg------------tgtctgtgtgt i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170275592 18 + 172585720 gtg--------tgtatgtatgtgtgt i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169021201 18 - 170955103 gtg--------tgtatgtatgtgtgt i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8308438 18 + 10161646 gtg--------tgtatgtatgtgtgt i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1337995 18 + 3144229 gtg--------tgtatgtatgtgtgt i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96617291 18 + 98384682 gtg--------tgtgtgtgtgtgtgt i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8160035 18 - 10857215 gtg--------tgtatgtatgtgtgt i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15556011 18 - 23502949 gtg--------tgtgtgtatgtgtgt i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169823948 7 + 171630274 -------------------TGTGTGT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1248075 26 - 2905041 gtataggtgttggtgtatatgtgtgt i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1199153 26 - 2164891 gtataggtgtgtgtgtgtatgtgtgt i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1445845 18 - 1813869 gtatacgtgtg--------tgtgcgt i aotNan1.NW_018494782v1 C 0 C 0 s canFam3.chr1 56117937 9 + 122678785 GGA--------TTTAAA--------- i canFam3.chr1 C 0 C 0 e otoGar3.GL873575 10913867 1567 - 12073884 I e dasNov3.JH569188 487436 1392 + 760995 I a score=1933187.000000 s hg38.chr6_KB021644v2_alt 19958 191 + 185823 gtatctCACACTTGTTTGGCCTTTCCTATATTTGTTTTAGGGAATTTTCTTTCTTCTGACTTTTATTGCCTTTGCTGACTTCTTCCTTTTCAGGTTAATATAA--TGTACA-AAATGCAGAGTAACCAAGTTCAAGTGTATATAACAATTTATTGCATCATTTA--AAAAGTATAATAATCTACAATTGATAAGAA s panTro5.chr6 173488244 191 + 175400573 gtatctCACACTTGTTTGGCCTTTCCTATATTTGTTTTAGGGAATTTTCTTTCTTCTGACTTTTATTGCCTTTGCTGACTTCTTCCTTTTCAGGTTAATATAA--TGTACA-AAATGCAGAGTAACCAAGTTCAAGTGTATATAACAATTTATTGCATCATTTA--AAAAGTGTAATAATCTACAATTGATAAGAA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171738287 191 + 173848474 gtatctCACACTTGTTTGGCCTTTCCTATATTTGTTTTAGGGAATTTTCTTTCTTCTGACTTTTATTGCCTTTGCTGACTTCTTCCTTTTCAGGTTAATATAA--TGTACA-AAATGCAGAGTAACCAAGTTCAAGTGTATATAACAATTTATTGCATCATTTA--AAAAGTGTAATAATCTACAATTGATAAGAA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11423413 191 - 12463322 gtATCTCACACTTGTTTGGCCTTTCCTATATTTGTTTTAGGGAATTTTCTTTCTTCTGACTTTTATTGCCTTTGCTGACTTCTTCCTTTTCAGGTTAATATAA--TGTACA-AAATGCAGAGTAACCAAGTTCAAGTGTATATAACAATTTATTGCATCATTTA--AAAAGTGTAATAATCTACAATTGATAAGAA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156249515 186 + 157873769 gtATCTCACACTTGTTTGGCCTTTCCTATATTTGTTTTAGGGAATTTTCTTTCTTCTGACTTTTATTGCCTTTGCTGACTTCTTCTTTTTCAAGTTAATA-------TACA-AAATGCAGAGTAACCAAGTTCAAGTGTATATAACAATTTATTGCATCGTTTA--AAAAGTGCAATAATCTATAATTGATAATAA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170275610 189 + 172585720 gtgtgtCGCACCTGTTTGGCCTTTCCTATATTTATTTTAGGGAATTTTCTTTCTTCTGACTTTTATTGTCTTTGCCGACTTCTTC-TTTTCAGGTTAATATAA--TGTATA-AAATGCAGAGTAACCAAGTTCAAGTGTATATAACAATTTATTGTATCA-TTA--AAAAGGGCAATAATCTACAATTGATAATAA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169021219 189 - 170955103 gtgtgtCACACCTGTTTGGCCTTTCCTATATTTATTTTAGGGAATTTTCTTTCTTCTGACTTTTATTGTCTTTGCCGACTTCTTC-TTTTCAGGTTAATATAA--TGTATA-AAATGCAGAGTAACCAAGTTCAAGTGTATATAACAATTTATTGTATCA-TTA--AAAAGGGCAATAATCTACAATTGATAATAA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8308456 189 + 10161646 gtgtgtCACACCTGTTTGGCCTTTCCTATATTTATTTTAGGGAATTTTCTTTCTTCTGACTTTTATTGTCTTTGCCGACTTCTTC-TTTTCAGGTTAATATAA--TGTATA-AAATGCAGAGTAACCAAGTTCAAGTGTATATAACAATTTATTGTATCA-TTA--AAAAGGGCAATAATCTACAATTGATAATAA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1338013 189 + 3144229 gtgtgtcacgcctgtttgacctttcctatatTTATTTTAGGGAATTTTCTTTCTTCTGACTTTTATTGTCTTTGCCGACTTCTTC-TTTTCAGGTTAATATAA--TGTATA-AAATGCAGAGTAACCAAGTTCAAGTGTATATAACAATTTATTGTATCA-TTA--AAAAGGGCAATAATCTACAATTGATAGTAA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96617309 191 + 98384682 gtgtCTCACACCTGTTTGACCTTTCCTATATTTGTTTTAGGGAGTTTTATTTCTTCTGACTTTTATTGTTTTTGCTGACTTCTTC-TTTTCAGGTTAATATAATGTGTATA-AAATGCAGAGTAACCAAGTTCAAGTGTATATAACAATTTATTGTATCA-TTA--AAAAGGGCAATAATCTACAATTGATAATAA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8160053 189 - 10857215 gtgtgtcacacctgtttgacctttcctatatTTATTTTAGGGAATTTTCTTTCTTCTGACTTTTATTGTCTTTGCCGACTTCTTC-TTTTCAGGTTAATATAA--TGTATA-AAATGCAGAGTAACCAAGTTCAAGTGTATATAACAATTTATTGTATCA-TTA--AAAAGGGCAATAATCTACAATTGATAGTAA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15556029 190 - 23502949 gtgtCTCACATCTCTTTGACCTTTCCTATATTTATTTTAGGAAATTTTCTTTCTTCTGATTTTTATTGTCTTTGCTGACTTCTTC-TTTTCAGGTTAATATAA--TGTATA-AAATGCAGAGTAACCAAGTTCAAGTGTATATAACAATTTATTGTATCATTTA--AAAAGGGCAATAATCTACAATTGATAATAA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169823955 188 + 171630274 GTATCTCACACCTGTTTGACCTTTCCTGTATTTATTTTGGAGAATTTTCTTTCTTCTGACTTTTACTGCCGTTGATGACTTCTTCCTTTTCAGGTTAATAGAA--TGTACA-AAATGCAGAGCAACCAGGTTCGAGTGTATTTAACAATTGATTGTATCATTTA--AAAAGTGA---AATCTACAATTGATAATAA i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1248101 188 - 2905041 gtatCTCATGCCTGTTTGAACTTTACTATGTTTATTTTAGATAATTTTCTTTTTTCTGACTTGTATTGCCTTTGATGACTTCTTCCTTTTCAGGTTGATAGAA--GGTACA-AAATGCAGAGTAACCAGGTTCAAGTGTATATAACAATTTATTGTATCATTTA--AAAAGTGA---AATCCACAGTTGATAATAA i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1199179 188 - 2164891 gtATCTCACACCTGTTTGACCTTTCCTATATTTATTTTACAGAATTTTCTTTCTTCTGACTTTTATTGCCTTTGATGACTTCTTCCTTTTCAGGTTGATAGAA--TGTACA-AAATGCAGAGTAACTAGGTTCAAGTGTATATAACAATTTATTGTATCATTTA--AAGAGTGA---AATCTACAGTTGATAATAA i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1445863 188 - 1813869 gtATCTCACACCTGTTTGACGTTTCCTATATTTATTTTAGAGAACTTTCTTTCTTCTGACTTTTATTGCCGTTGATGACTTCTTCCTTTTCAGGTTAATAGAA--TGCACA-AAATGCAGAGTAACCAGGTTCAAGTGTATATAACAATTTATTATGTCATTTA--AAAAGTGA---AATCTACAGTTGATGATAA i aotNan1.NW_018494782v1 C 0 C 0 s canFam3.chr1 56117946 188 + 122678785 ATGTCTCTCAGCTGTTTGAAGTTTCCTGTGTTTATTTTAGAAAGTCTCCTGTCGATGGACTTTCATTGCCTTTGCCAGCTTCCTTCTGTTTAGTCTAATAGAG---GTGAA-AAATACAAATTAACCAAGTTCAAGGGTGTATCGCAATCCGTCATATAA-CAAGTAAAAGTGA---CATCTCCAATtgacgaggg i canFam3.chr1 C 0 I 451 s dasNov3.JH569188 488828 183 + 760995 GCATCCCAGAGTTGATAAGCCTTTCCTATACTTCTATTAGAAAGTCTCCATTCAACTGACTTCCATTGCCTTTGTAGGATTCCCTGCTTTTAGTCT-ATAGAA--AGCATATAAATAAAAATGAACAAGGTGTAAGTGTATAT--TGATTCACCATACAAT-----AAAACCGA---AATTTCCAATAAGTGAGAA i dasNov3.JH569188 I 1392 C 0 e otoGar3.GL873575 10913867 1567 - 12073884 I a score=1296613.000000 s hg38.chr6_KB021644v2_alt 20149 145 + 185823 ATGAATGGTTTGAGATGATAATAGATTTAGAGTTCTAGCTCACGCC-AACACTAAAATAA---CCATATGAGATAAAA------------------TAACA-----TTTTCTTTTTCCAGCAAAGCGAAAAA----------------ACCTGATTAATCCTACCACT--AAAAAAAAAAC--------ACTAAAATT s panTro5.chr6 173488435 144 + 175400573 ATGAATGGTTTGAGATGATAATAGATTTAGAGTTCTAGCTCACGCC-AACACTAAAATAA---CCATATGAGATAAAA------------------TAACA-----TTTTCTTTTTCCAGCAAAGCGATAAA----------------ACCTGATTAATCCTACCACT---AAAAAAAAAC--------ACTAAAATT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171738478 144 + 173848474 ATGAATGGTTTGAGATGATAATAGATTTAGAGTTCTAGCTCACGCC-AACACTAAAATAA---CCATATGAGATAAAA------------------TAACA-----TTTTCTTTTTCCAGCAAAGCGATAAA----------------ACCTGATTAATCCTACCACT---AAAAAAAACC--------ACTAAAATT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11423604 144 - 12463322 ATGAATGGTTTGAGATGATAATAGATTTAGAACTCTAGCTCACGCC-AACCCTAAAATAA---CCATATGAGATAAAA------------------TAACA-----TTTTCTTTTTCCAGCAAAGCAATAAA----------------ACCTGGTTAATCCTACCACT---AAAAAAAAAC--------ACTAAAATT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156249701 142 + 157873769 ATGAATGGTTTGAGATGATAATAGATTTAGAGCTCTAGCTCATGCC-AACACTAAAATAA---CCATATAAGATAAAA------------------TAACA-----TTTTCTTTTTCCAGCAAAGTGATAAA----------------GCCTGATTAATCCTACCACT---AAAAAAAAC----------CTAAAATT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170275799 148 + 172585720 ATGAATGGTTTGAGATGATAATAGAGTTAGAGCTCTAGCTCACGCC-AACACTAAAATAA---CCATATGAGATAAAA------------------TAACG-----TTTTCTTTTTCCGGCAAAGCAATAAA----------------ACCTGATTGATCCTACCACT--AAAAAAAAAAC-----AAAACTAAAATT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169021408 148 - 170955103 ATGAATGGTTTGAGATGATAATAGAGTTAGAGCTCTAGCTCACGCC-AACACTAAAATAA---CCATATGAGATAAAA------------------TAACG-----TTTTCTTTTTCCGGCAAAGCAATAAA----------------ACCTGATTGATCCTACCACT--AAAAAAAAAAC-----AAAACTAAAATT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8308645 150 + 10161646 ATGAATGGTTTGAGATGATAATAGAGTTAGAGCTCTAGCTCACGCC-AACACTAAAATAA---CCATATGAGATAAAA------------------TAACG-----TTTTCTTTTTCCGGCAAAGCAATAAA----------------ACCTGATTGATCCTACCACTAAAAAAAAAAAAC-----AAAACTAAAATT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1338202 152 + 3144229 ATGAATGGTTTGAGATGATAATAGAGTTAGAGCTCTAGCTCACCCC-AACACTAAAATAA---CCATATGAGATAAAA------------------TAACA-----TTTTCTTTTTCCGGCAAAGTGATAAA----------------ACCTGATTGATACTACCACT--AAAAAAAAAACA-CAAAAAACTAAAATT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96617500 151 + 98384682 ATGAATGGTTTGAGATGATAATAGAGTTAGAGCTCTAGCTTACGCC-AACACTAAAATAA---CCATATGAGATAAAA------------------TAACA-----TTTTCTTTTTCTGGCAAAGTGATAAA----------------ACCTGATTGATCCTACCACT--aaaaaaaaaacaaaaaaaaaacaaaa-- i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8160242 153 - 10857215 ATGAATGGTTTGAGATGATAATAGAGTTAGAGCTCTAGCTCACCCC-AACACTAAAATAA---CCATATGAGATAAAA------------------TAACA-----TTTTCTTTTTCCAGCAAAGTGATAAA----------------ACCTGATTGATCCTACCACT--AAAAAAAAAAAACCAAAAAACTAAAATT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15556219 147 - 23502949 ATGAATGGTTTGAGATGATAATAGAGTTAGAGCTCTAGCTCACGCC-AACACTAAAATAA---CCATATGAGATAAAA------------------TAACA-----TTTTCTTTGTCCAGCAAAGCAATAAA----------------ACCTGATTGATCCTACCACT---AAAAAAACCC-----AAAACTTAAATT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169824143 159 + 171630274 AGGGATGGGTTGAGATGATAACAGATTTAGAGCTCTAGCTCACAAC-AACACTAAAATAA---TCATATCAGATAAAATACACAAACGTTAAAAACTAACG-----TTTACTTTTTCAGACAATGTGATAAA----------------CCTTGATTGATCATACCAGT-------AAAAAC-------AAGTAAAATT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1248289 159 - 2905041 ACGGATGGTTTGAGATGATAATAGATTTAGAGCTCTAGCTCACAAC-AACACTAAAATAA---TCATATGAGATAAAATATACAAACATTAAAAACTAACA-----TTTACTTTTTCAGGCAATGTGATAAA----------------CCCTGATTGATCCTAGCAGT-------AAAAAC-------AACTAAAGTT i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1199367 159 - 2164891 ACAGATCGTTTGAGATGATAATAGATTTAGAGCTCTAGCTCACAAC-AACACTAAAATAA---TCATATGAGATTAAATATACAAACGTTAAAAACTAACG-----TTTACTTTTTCAGGCAATGTGATAAA----------------CCCTGATTGATCCTACCAGT-------AAAAAC-------AACTAAAATT i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1446051 159 - 1813869 ACGGATGGTTTAAGATGGTAATAGATTTAGAGCTCTAGCTCACAAC-AACACTAAAATAA---TCATATCAGATAAAATATACAAACGTTAAAAACTAACG-----TTTACTTTTTCAGGCAATGTGATAAA----------------CCCTGATCGATCCTACCAGT-------AAAAAC-------AACTGAAATT i aotNan1.NW_018494782v1 C 0 C 0 s canFam3.chr1 56118585 178 + 122678785 ATGAGTGGTTTGGGATGATGGTAAATTCAGAGCCATACCTCATAGT-GTCACTGAAATAAATTTCATAGGAGAGTAAATGTATACATGTTAAAAAGCATCC-----CCCACCCTTGCTCCCAATGTGGTAGATTAGAGAGATCAGATGCCCTGGGTGAGTCTGAGATT-------ATAATC-------AGCTAGATAT i canFam3.chr1 I 451 C 0 s dasNov3.JH569188 489011 178 + 760995 ATGGATGGGTGAGGATGATTATAAATTTAGAGCTCTAACTCACACTAAACACTGAAATAAATTCCAGAAGAAAGTAAGTATAAGCATCATAAAAAGAAACATGTATTTTTCTTTTTCTGGAAATATGACATATTAGATA---------CCCTGATT-ATCCTACCACA--CACACACACAT--------ACAGAGATT i dasNov3.JH569188 C 0 I 2516 e otoGar3.GL873575 10913867 1567 - 12073884 I a score=89697.000000 s hg38.chr6_KB021644v2_alt 20294 16 + 185823 ACTGGAATacacacac s panTro5.chr6 173488579 16 + 175400573 ACTGGAATacacacac i panTro5.chr6 C 0 C 0 s panPan2.chr6 171738622 16 + 173848474 ACTGGAATacacacac i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11423748 16 - 12463322 ACTGGAATacacacac i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156249843 16 + 157873769 ACTGGAATacacacac i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170275947 16 + 172585720 ACTGGAATacacacac i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169021556 16 - 170955103 ACTGGAATacacacac i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8308795 16 + 10161646 ACTGGAATacacacac i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1338354 16 + 3144229 ACTGGAATacacacac i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96617651 10 + 98384682 ----aaaaaaacac-- i chlSab2.chr13 C 0 I 31 s manLeu1.NW_012106474v1 8160395 16 - 10857215 ACTGGAATacacacac i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15556366 16 - 23502949 ACTGGAATacacacac i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169824302 5 + 171630274 -CTAGA---------- i calJac3.chr4 C 0 I 2 s saiBol1.JH378287 1248448 16 - 2905041 ACTGGAATacacccac i saiBol1.JH378287 C 0 I 20 s cebCap1.NW_016107695v1 1199526 8 - 2164891 ACTGGA--------AT i cebCap1.NW_016107695v1 C 0 I 20 s aotNan1.NW_018494782v1 1446210 6 - 1813869 ACTGGA---------- i aotNan1.NW_018494782v1 C 0 I 14 s canFam3.chr1 56118763 15 + 122678785 TCTGGA-TACATAGAC i canFam3.chr1 C 0 C 0 e otoGar3.GL873575 10913867 1567 - 12073884 I e dasNov3.JH569188 489189 2516 + 760995 I a score=26243.000000 s hg38.chr6_KB021644v2_alt 20310 36 + 185823 --------------------------------acacacacacacacac--acacacacacacatatacgt s panTro5.chr6 173488595 24 + 175400573 --------------------------------acacacacacacacac--ac------------aTACGt i panTro5.chr6 C 0 C 0 s panPan2.chr6 171738638 34 + 173848474 --------------------------------acacacacacacacac--acacacacacac--aTACGt i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11423764 30 - 12463322 --------------------------------acacacacacacacac--acacGtat------atacat i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156249859 22 + 157873769 --------------------------------acacacacacacatac----------------atacat i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170275963 14 + 172585720 ----------------------------------acatacacacacat---------------------- i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169021572 14 - 170955103 ----------------------------------acatacacacacat---------------------- i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8308811 14 + 10161646 ----------------------------------acatacacacacat---------------------- i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1338370 10 + 3144229 ----------------------------------acacacacac-------------------------- i cerAty1.NW_012002071v1 C 0 C 0 s manLeu1.NW_012106474v1 8160411 8 - 10857215 ------------------------------------acacacac-------------------------- i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15556382 18 - 23502949 --------------------------------acacacacacacacatat-------------------- i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169824309 16 + 171630274 --------------------------------ACACACACACGCACAC---------------------- i calJac3.chr4 I 2 C 0 s saiBol1.JH378287 1248484 16 - 2905041 --------------------------------acacacacacacacac---------------------- i saiBol1.JH378287 I 20 C 0 s cebCap1.NW_016107695v1 1199554 16 - 2164891 --------------------------------acacacacacacacac---------------------- i cebCap1.NW_016107695v1 I 20 C 0 s aotNan1.NW_018494782v1 1446230 16 - 1813869 --------------------------------acacacacacacacac---------------------- i aotNan1.NW_018494782v1 I 14 C 0 s canFam3.chr1 56118778 48 + 122678785 ACACATTTGCTCACATTcacatacacacacacacacacacacacacac---------------------- i canFam3.chr1 C 0 C 0 e otoGar3.GL873575 10913867 1567 - 12073884 I e dasNov3.JH569188 489189 2516 + 760995 I e chlSab2.chr13 96617661 31 + 98384682 I a score=110829.000000 s hg38.chr6_KB021644v2_alt 20346 12 + 185823 acatatctatac s panTro5.chr6 173488619 12 + 175400573 acatatctatac i panTro5.chr6 C 0 C 0 s panPan2.chr6 171738672 12 + 173848474 acatatctatac i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11423794 12 - 12463322 acatatctatac i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156249881 12 + 157873769 acatatctatac i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170275977 12 + 172585720 acatatctatac i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169021586 12 - 170955103 acatatctatac i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8308825 12 + 10161646 acatatctatat i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1338380 8 + 3144229 ----aTCTATAC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96617692 12 + 98384682 acatatctatac i chlSab2.chr13 I 31 C 0 s manLeu1.NW_012106474v1 8160419 8 - 10857215 ----atctatac i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15556400 12 - 23502949 acatatctatac i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169824325 12 + 171630274 ACACCCCTATAC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1248500 12 - 2905041 acacCCCtatac i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1199570 12 - 2164891 acacaTCTATAC i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1446246 12 - 1813869 acacaTCTATAC i aotNan1.NW_018494782v1 C 0 C 0 s canFam3.chr1 56118826 12 + 122678785 acGTGTGTACAC i canFam3.chr1 C 0 I 15999 e otoGar3.GL873575 10913867 1567 - 12073884 I e dasNov3.JH569188 489189 2516 + 760995 I a score=15685270.000000 s hg38.chr6_KB021644v2_alt 20358 1719 + 185823 tgag-atatgtgtatgcacatatatgtatagagacgt--aagtgtgtgta------tgta--tgtgcgtgtgtatatagatataagatataggtatagagagagatTGTAGGGACCAAGAGGGGATACGGGTAGAAGGATTAGAAAGCTGTTATGATGTGGGTGGGAAGTGATGGACACAAATCAAAATGGAGGCTTTACTGTGAGCACTTAAATGGTTTTCAAAGAATCTACAGAGAAAGGGTGATAAAAGTTCTGTGATGAAAAAAGAAATTAAGCAAATAATATGATAAATATTTGAATGTATCTAGTCAAACACCATAAATAATGTTTTAGGGGGCCAGAAAAGATAGAACGAATAGACCCAAGATTAGCTTGTAATTTGGGAGATGGGATAACGTAAGTTTGTTGAGAAATTTTAGTTCCGGAACCTTGCTAAATAGAATATATGACTTTAAGTACTGATGTATTAAATTTTGCAGtggttgattttgagtgccagtctgactggatt-aggggtgccctgatagctggtaaagcgttcactttcctcagcgcatcagcagactctgagcctatcctcctccccctgcaagggaaacccaggtgaactggccctggattggaaagactgggctgccccaggtgtgtccgtgagggtgtttctggagac-tggtgtgtgacttgggggactgagtggggaacatcctcctcagtgt----gggtgggcaccatcaaatcgagtgggagtccagatggaagacaaaggcagagcgaggccgcatttttgctctctcacttctgggacacccttct-ttgcccttgcaaaccagaattccaagctctctggcttttggaatctgagactcacacaagcagtggtcaggctcttgagtcttcagacgtggactgagagttacatcattacttccttggtcctgaggccttcaggcttgga--ttgagccaggagcctggcattcctaattcttaagcttgcagataaacctacagcctattgttggtctcagccttcataatcaagggagccaattcccacaataaacctcttctctctggagaattctgactaaaacCttaagatctataatacaaccacagaaataataaaaatcagtata-gtacctctaaactattagagaaa--aaagtaaatttaaaaacatgaaacagacaataaaagagaaaaaaggtatgggaaa-t-gggacaaat-aaaaatattaagtaatacagaaataactcaaatatatcaataattacaataaatgcaaatgcattaaattttacatttaaaagacaaaggttttgacactggatATTTCTAAAAATCCATATGAAATAATC-TTAAAATACATGATGTTTTAGACAAATTTAACAggaaattggccttcagatagaactatataagaaggaagttactgggcagtgctcttatgaacag-catctgtaagagaattagggaagcaagattgggcaaagaaagaagtaaaaatgggatgcagttgcaagtgaggcatcagctcgtcccactgggtttctggacctgagatggatcctcagaatttccctaacttgagaaagggggctgtgtcttatactcttacattgcccagtttcaaatagggactgcttcctggataggagtgtga-ctttggcaagccaattctctttgttagaggaaaatttcttaggaaagacttagcataaagctgtAA-TTTTT- s panTro5.chr6 173488631 1719 + 175400573 tgag-atatgtgtatgcacatatatgtatagagacgt--aagtgtgtgta------tgta--tgtgtgtgtgtatatagatataagatataggtgtagagagagatTGTAGGGACCAAGAGGGGATACGGGTAGAAGGATTAGAAAGCTGTTATGATGTGGGTGGGAAGTGATGGACACAAATCAAAATGGAGGCTTTACTGTGAGCACTTAAATGGTTTTCAAAGAATCTACAGAGAAAGGGTGATAAAAGTTCTGTGATGAAAAAAGAAATTAAGCAAATAATATGATAAATATTTGAATATATCTAGTCAAACAACATAAATAATGTTTCAGGGGGCCAGAAAAGATAGAACGAATAGACCCAAGATTAGCTTGTAATTTGGGAGATGGGATAACATAAGTTTGTTGAGAAATTTTAGTTCCAGAACCTTGCTACATAGAATATATGACTTTAAGTACTGATGTATTAAATTTTGCAGtggttgattttgagtgccagtctgactggatt-aggggtgccctgatagctggtaaagcgttcactttcctcagcgcatcagcagactctgagcccatcctcctccccctgcaagggaaacccaggtgaactggccctggattggaaagactgggctgccccaggtgtgtccgcgagggtgtttctggagac-tggtgtgtgagttgggggactgagtggggaacatcctccccattgt----gggtgggcaccatcaaattgagtgggagtccagatggaagacaaaggcagagcgaggccgcatttttgctctctcacttctgggacacccttct-ttgcccttgcaaaccagaattccaagctctctggcttttggaatctgagactcacacaagcagtggtcaggctcttgagtcttcagacgtggactgagagttacatcattacttccttggtcctgaggccttcaggcttgga--ttgagccaggagcctggcattcctagttcttaagcttgcagataaacctacagcctattgttggtctcagccttcataatcaagggagccaattcccacaataaacctcttctctctggagaattctgactaaaacCttaagatctataatacaaccacagaaataataaaaatcagtata-gtacctctaaactattagagaaa--aaagtaaatttaaaaacatgaaacagacaataaaagagaaaaaagatatgggaaa-t-gggacaaat-aaaaatattaaataatacagaaataactcaaatatatcaataattacaataaatgcaaatgcattaaattttacatttaaaagacaaaggttttgacactggatatttttaaaaaTCCATATGAAATAATC-TTAAAATACATGATGTTTTAGACAAATTTAACAggaaattggccttcagacagaactatataagaaggaagttactgggcagtgctcttatgaacag-catccgtaagagaattagggaagcaagactgggcaaagaaagaagtaaaaatgtgatgcagttgcaagtgaggcatcagctcgtcccactgggtttctggacctgagatggatcctcagaattgccctaacttgagaaagggggctgtgtcttatactcttacattacccagtttcaaatagggactgcttcctggataggagtgtga-ctttggcaagccaattctctttgttagaggaaaatttcttaggaaagacttagcataaagctgtAT-TTTTT- i panTro5.chr6 C 0 C 0 s panPan2.chr6 171738684 1719 + 173848474 tgag-atatgtgtatgcacatatatgtatagagacgt--aagtgtgtgta------tgta--tgtgtgtgtgtatatagatataagatataggtgtagagagagatTGTAGGGACCAAGAGGGGATACGGGTAGAAGGATTAGAAAGCTGTTATGATGTGGGTGGGAAGTGATGGACACAAATCAAAATGGAGGCTTTACTGTGAGCACTTAAATGGTTTTCAAAGAATCTACAGAGAAAGGGTGATAAAAGTTCTGTGATGAAAAAAGAAATTAAGCAAATAATATGATAAATATTTGAATATATCTAGTCAAACAACATAAATAATGTTTCAGGGGGCCAGAAAAGATAGAACGAATAGACCCAAGATTAGCTTGTAATTTGGGAGATGGGATAACATAAGTTTGTTGAGAAATTTTAGTTCCAGAACCTTGCTACATAGAATATATGACTTTAAGTACTGATGTATTAAATTTTGCAGtggttgattttgagtgccagtctgactggatt-aggggtgccctgatagctggtaaagcgttcactttcctcagcgcatcagcagactctgagcccatcctcctccccctgcaagggaaacccaggtgaactggccctggattggaaagactgggctgccccaggtgtgtccgtgagggtgtttctggagac-tggtgtgtgagttgggggactgagtggggaacatcctccccattgt----gggtgggcaccatcaaattgagtgggagtccagatggaagacaaaggcagagcgaggccgcatttttgctctctcacttctgggacacccttct-ttgcccttgcaaaccagaattccaagctctctggcttttggaatctgagactcacacaagcagtggtcaggctcttgagtcttcagacgtggactgagagttacatcattacttccttggtcctgaggccttcaggcttgga--ttgagccaggagcctggcattcctagttcttaagcttgcagataaacctacagcctattgttggtctcagccttcataatcaagggagccaattcccacaataaacctcttctctctggagaattctgactaaaacCttaagatctataatacaaccacagaaataataaaaatcagtata-gtacctctaaactattagagaaa--aaagtaaatttaaaaacatgaaacagacaataaaagagaaaaaagatatgggaaa-t-gggacaaat-aaaaatattaaataatacagaaataactcaaatatatcaataattacaataaatgcaaatgcattaaattttacatttaaaagacaaaggttttgacactggatatttttaaaaaTCCATATGAAATAATC-TTAAAATACATGATGTTTTAGACAAATTTAACAggaaattggccttcagatagaactatataagaaggaagttactgggcagtgctcttatgaacag-catccgtaagagaattagggaagcaagactgggcaaagaaagaagtaaaaatgtgatgcagttgcaagtgaggcatcagctcgtcccactgggtttctggacctgagatggatcctcagaattgccctaacttgagaaagggggctgtgtcttatactcttacattacccagtttcaaatagggactgcttcctggataggagtgtga-ctttggcaagccaattctctttgttagaggaaaatttcttaggaaagacttagcataaagctgtAA-TTTTT- i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11423806 1715 - 12463322 tgat-atatgtgtatgcacatatatgtatagagacat--aagtgtgtgta------tgta--tgtgtgtgtgtatatagatataagatataggtatagagagagatTGTAGGGACCGAGAGGGGATACGGGTAGAAGGATTAGAAAGCTGTTATGATGTGGGTGGGAAGTGACGGACACAAATCAAAATGGAGGCTTTACTGTGAGCACTTAAATGGTTTTCAAAGAATCTACAGAGAAAGGGTGATAAAAGTTCTGTGATGAAAAAAGAAACTAAGCAAATAATATGATAAATATTTGAATATATCTAGTCAAACAACATAAATAATGTTTTAGGGGGCCAGAAAAGATAGAACGAATAGACCCAAGATTAGCTTGTAATTTGGGAGATGGGATAACGTAAGTTTGTTGAGAAATTTTAGTTCCGGAACCTTGCTAAATAGAATATATGACTTTAAGTACTGACGTATTAAATTTTGCAGtggttgattttgagtgccagtctgactggatt-aggggtgccctgatagctggtaaagcgctcactttcctcaccgcatcagcagactctgagcccgtcctcctccccc-gcaagggaaacccaggtgaa-tggccctggattggaaagactgggctgccccaggtgtgcccatgagggtgtttctggagac-tggtgtgtgagttgggggactgagtggggaacatcctccccagtgt----gggtgggcaccatcaaatcgagtgggagtccagatggaagacaaaggcagagcgaggccgcatttttgctctctcacttctgggacacccttct-ttgcccttgcaaaccagaattccaagctctctggcttttggaatctgagactcacacaagcagtggtcaggctcttgagtcttcagacgtggactgagagttacatcattacttccttggtcctgaggccttcaggcttgga--ttgagccaggagcctggcattcctagttcttaagcttgcagataaacctacagcctattgttggtctcagccttcataatcaagggagccaattcccacaataaacctcttctctctggagaattctgactaaaacCttaagatctataatacaaccacagaaataataaaaatcaatata-ttatctctaaactgttagagaaa--aaagtaaatttaaaaacatgaaacagacaataaaagagaaaaaagatatgggaaa-t-gggacaaat-aaaaatattaaataatacagaaataactcaaatatatcaataattacaataaatgcaaatgcattaaattttacatttaaaagacaaaggttttgacactggatATTTCTAAAAATCCATATGAAATAATC-TTAAAATACATGATGTTTTAGACAAATTTAACAggaaattggccttcagatagaactatataagaaggaagttactgggcagtgctcttatgaacag-catctgtaagaggataagggaagcaagattgggcaaagaaagaagtaaaaatgtgatgcagttgcaagtgaggcatcacctcgt-ccactgggtttctggacctgagatggatcctcagaattgccctaacttcagaaagggggctgtgtcttatactcttac-ttgcccagtttcaaatagggactgcttcctggataggagtgtga-ctttggcaagccaattctctttgttagaggaaaatttcttaggaaagacttagcataaagctgtAA-TTTTT- i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156249893 1707 + 157873769 cgat-atatgtgtatgcacctatatgtatagagacat--aagtgtgtgta------tgta--tgcgtgtgtgtatatagatataGGATACAGGTATAGAGAGAGATTGTAGGGACCAAGAGGGGATACGGGTAGAAGGATTAGAAAGCTGTTATGATGTGGGTGGGAAGTGATGGACACAAATCAAAATGGAGGCTTTACTGTGAGCACTTAAATGGTTTTCAAAGAACCTACAGAGAAAGTGTGATAAAAGTTCTGAGATGAAAAAAGAAATTAAGCAAATAATATGATAAATATTTGAATACATCTAGTCAAACAACATAAATAACGTTTTAGGGGGCCAGAAAAGATGGAACGAATAGACCCAAGATTAGCTTGTAATCTGGGAGATGGGATAACGTAAGTTTGTTGAGAAAGTTTAGTTCTGGAACCTTGCTAAATAGAATATAGGACTTTAAGTACTGATGTATTAAATTTTGCAGtggttgattttgagtgccagtctaactggatt-aggggtgtcctgatagctggtaaagcgttaactttcctcagcgcatcagcagactctgagcctgtcct----cccctg-aagggaaactcaggtgaactggccctggattggaaagactgggctgccccaggtgtgcccgtgagggtgtttttggagac-tggtgtgtgagtggggggactgagtgaagaacatcctccccagtgt----gggtgggcaccatcaaacggagtgggagtt--gatggaagacaagggcagagcgaggccacgtttttgctctctcacttctgggacacccttttcttgcccttgcaaaccacagttccaagctctctggcttttggaatctgagact--cacaagcagtggtcaggctcttgagtcttcagacgtggactgagagttacatcattacttcctgggtcctgaggccttcaggcttgga--ttgagccaggagcctggcattcctagttcttcagcttgcagataaacctacagcctattgttggtctcagccttcataatcaagggagccaattcccacaataaacctcttctctctggagaattctgactaaaacCTTAAGATCTATAATacaaccacagaaataataaaaatcagtata-ttacttctaaactattagagaaa--aaagtacatttaaaaacatgaaacagac----aaagagaaaaaagatatgggaaa-t-gggacaaat-aaaaatattaaataatgcagaaataactcaaatatatcaataattacaataaatgcaaatgcattaaattttacatttaaaagacaaacgttttgacactggatatttttaaaaatccatatgaaattatC-TTAAAATATGTGATGTTTTAGACAAATTTAACAggaaattggccttcagatagaactatataagaaggaagttactgggcagtgctcttatgaacag-catctgtaagagaataagggaagcaagattgggcaaagaaagaagtcaaaatgtgatgcaactgcaagtgaggcatcagttcgtcccactgggtttctggccctgagatggatcctcagaattgccctaacttgagaaagggggctgtgtcttgtactcttatattgcccagtttcaaatagggactgcttcctggataggagtgtga-ctttggcaagccaattctctttgttagaggaaaatttcttaggaaagacttagcataaagctgtAA-TTTTT- i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170275989 1704 + 172585720 tgac-atatgcatatgcacatATATGTGTGGAGACAT--AAgtgtgtgta------tgta--tgtgtgtgtgtgtatagatgtaggatata----tAGAGAGAGATTATAGGGACCAAGAGAGGATACGGGTAGAAGGATTAGAAAGCTGTTATGATGTAGGTGGGAAGTGATGGACACAAATC-AAATGGAGGCTTTACTGTGAGCACTTAAATGGTTTTCAAAGAACCTACAGAGAAAGTGTGATAAAAGTTCTGAGATGCAAaaagaaattaagcaaataatatgataaatatgtaaatacatctagtcaaacaatataaataaTATTTTAGGGGGCCAAAAAAGGTAGAACCAATAGACCCAAAATTAGCTTGTAATTTGGGAGATGGGATAATGTAAGTTTGTTGAGAAATTTTAGTTCTGGAACCTTGCTAAATAGAATGTAGGAGTTTAAGTGCTGATGTATTAAATTTTGCAGtggttgattttgagtaccagtctgactggattaagggatgccctgatagctggtaaagtgttaactttcctcagtgcatcagcagactctaagccggtcatcctccccctgcaagggaaactcaggtgaactggcccttgattggaaagactgggctgccccaggtgtgcctgtgagggtatttctggagac-tggtgtgtgagttgggggactgagtggggaacaccctccccaatgt----gggtgggcaccatcaaatagggtgggagtctagatggaagacaaaggcagagtgaggccgcatttttgctctctcacttctgggacacccttctcttgcccttgcaaaccagaattccaagctctctggcttttggaatctgagactcacacaagcagtggccaggc-------tcttcagacgtggactgagagttacatcatcgcttccttggtcctaaggccttcaggcttgga--ttgagccaagagcctggcgttcctagttcctcagcttgcagataaacctacagcctattgtgggtctcagccttcaaaatcaagggagccaattcccacaataaacctcttctctctggagaattctgactaaAatcttaagatctataatacaaccacagaaataataaaaatcagtata-ttgcttctaaactattagagaaa--aaagtaaatttaaaaacatgaaacgggcaataaaagagaaaacagatatgggaaa-g-gggacaaat-aaaaatattaaataatacagaaataactcaaatatatcagtaattacaataaatgcaaatgcattaaactttacatttaaaagacaaaggttttgacactggatatttttaaaaaTCCGTATGAAATCATC-TTAAAATATATGATGTTTTAGACAAATTTAACAggaaattggccttcagatagaactatataagaaggaagttactgggcagtgctgttatgaacag-catctgtaagagaataagggaagcaagactgggcaaagaaagaagtcaacatgtgatgcagttgcaagtgaggcatcagctggtcccactggctgt------ctgagatggatcctcagaattgccctaacttgagaaagggggctgtgacttacactcttatattgcccagtttcgaatagggactgcttcctggataggagtgtgg-ctttggcaagccaactctctttgtcagagggaaatttcttaggaaagacttagcataaagctgtAA-TTTTTA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169021598 1704 - 170955103 tgac-atatgcatatgcacataTATGTGTGGAGACAT--AAGTGTGTGTA------TGTA--TGTGTGTGTGTGTATAGATGTAGGATATA----TATAGAGAGATTATAGGGACCAAGAGAGGATACGGGTAGAAGGATTAGAAAGCTGTTATGATGTAGGTGGGAAGTGATGGACACAAATC-AAATGGAGGCTTTACTGTGAGCACTTAAATGGTTTTCAAAGAACCTACAGAGAAAGTGTGATAAAAGTTctgagatgcaaaaagaaattaagcaaataatatgataaatatgtaaatacatctagtcaaacaatataaataatattttagggggccaaaaaaggtagaaccaatagacccaaaattagcttgtaatttgggagatgggataatgtaagttTGTTGAGAAATTTTAGTTCTGGAACCTTGCTAAATAGAATGTAGGAGTTTAAGTGCTGATGTATTAAATTTTGCAGtggttgattttgagtaccagtctgactggattaagggatgccctgatagctggtaaagtgttaactttcctcagtgcctcagcagactctgagccggtcatcctccccctgcaagggaaactcaggtgaactggcccttgattggaaagactgggctgccccaggtgtgcctgtgagggtatttctggagac-tggtgtgtgagttgggggactgagtggggaacaccctccccaatgt----gggtgggcaccatcaaatagggtgggagtctagatggaagacaaaggcagagtgaggccgcatttttgctctctcacttctgggacacccttctcttgcccttgcaaaccagaattccaagctctctggcttttggaatctgagactcacacaagcagtggccaggc-------tcttcagacgtggactgagagttacatcatcgcttccttggtcctaaggccttcaggcttgga--ttgagccaagagcctggcgttcctagttcttcagcttgcagataaacctacagcctattgtgggtctcagccttcaaaatcaagggagccaattcccacaataaacctcttctcTCTGGAGAATTCTGACTAAAatcttaagatctataatacaaccacagaaataataaaaatcagtata-ttgcttctaaactattagagaaa--aaagtaaatttaaaaacatgaaacgggcaataaaagagaaaacagatatgggaaa-g-gggacaaat-aaaaatattaaataatacagaaataactcaaatatatcagtaattacaataaatgcaaatgcattaaactttacatttaaaagacaaaggttttgacactggatatttttaaaaaTCCGTATGAAATCATC-TTAAAATATATGATGTTCTAGACAAATTTAACAggaaattggccttcagatagaactatataagaaggaagttactgggcagtgctgttatgaacag-catctgtaagagaataagggaagcaagactgggcaaagaaagaagtcaacatgtgatgcagttgcaagtgaggcatcagctggtcccactggctgt------ctgagatggatcctcagaattgccctaacttgagaaagggggctgtgacttacactcttatattgcccagtttcgaatagggactgcttcctggataggagtgtgg-ctttggcaagccaactctctttgtcagagggaaatttcttaggaaagacttagcataaagctgtAA-TTTTTA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8308837 1704 + 10161646 tgac-atatgcatatgcacatatatgtgtggagacat--aagtgtgtgta------tgta--tgtgtgtgtgtgtatagatgtaggatata----tatagagagattataGGGACCAAGAGAGGATACGGGTAGAAGGATTAGAAAGCTGTTATGATGTAGGTGGGAAGTGATGGACACAAATC-AAATGGAGGCTTTACTGTGAGCACTTAAATGGTTTTCAAAGAACCTACAGAGAAAGTGTGATAAAAGTTCTGAGATGCAAaaagaaattaagcaaataatatgataaatatgtaaatacatctagtcaaacaatataaataaTATTTTAGGGGGCCAAAAAAGGTAGAACCAATAGACCCAAAATTAGCTTGTAATTTGGGAGATGGGATAATGTAAGTTTGTTGAGAAATTTTAGTTCTGGAACCTTGCTAAATAGAATGTAGGAGTTTAAATGCTGATGTATTAAATTTTGCAGtggttgattttgagtaccagtctgactggattaagggatgccctgatagctggtaaagtgttaactttcctcagtgcatcagcagactctgagccggtcatcctccccctgcaagggaaactcaggtgaactggcccttgattggaaagactgggctgccccaggtgtgcctgtgagggtatttctggagac-tggtgtgtgagttgggggactgagtggggaacaccctccccaatgt----gggtgggcaccatcaaatagggtgggagtctagatggaagacaaaggcagagtgaggccgcatttttgctctctcacttctgggacacccttctcttgcccttgcaaaccagaattccaagctctctggcttttggaatctgagactcacacaagcagtggccaggc-------tcttcagacgtggactgagagttacatcatcgcttccttggtcctaaggccttcaggcttgga--ttgagccaagagcctggcgttcctagttcttcagcttgcagataaacctacagcctattgtgggtctcagccttcaaaatcaagggagccaattcccacaataaacctcttctctctggagaattctgactaaAatcttaagatctataatacaaccacagaaataataaaaatcagtata-ttgcttctaaactattagagaaa--aaagtaaatttaaaaacatgaaacgggcaataaaagagaaaacagatatgggaaa-g-gggacaaat-aaaaatattaaataatacagaaataactcaaatatatcagtaattacaataaatgcaaatgcattaaactttacatttaaaagacaaaggttttgacactggatatttttaaaaaTCCGTATGAAATCATC-TTAAAATATATGATGTTTTAGACAAATTTAACAggaaattggccttcagatagaactatataagaaggaagttactgggcagtgctgttatgaacag-catctgtaagagaataagggaagcaagactgggcaaagaaagaagtcaacatgtgatgcagttgcaagtgaggcatcagctggtcccactggctgt------ctgagatggatcctcagaattgccctaacttgagaaagggggctgtgacttacactcttatattgcccagtttcgaatagggactgcttcctggataggagtgtgg-ctttggcaagccaactctctttgtcagagggaaatttcttaggaaagacttagcataaagctgtAA-TTTTTA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1338388 1710 + 3144229 TGAT-ATATGTATATGCACATATATGTGTGGAGACAT--AAGTGTGTGTA------TGTATGTGTGTGTGTGTGTATAGATGTAGGATATA----TAGAGAGAGATTATAGGGACCAAGAGAGGATACGGGTGGAAGGATTAGAAAGCTGTTATGATGTAGGTGGGAAGTGATGGACACAGATC-AAATGGAGGCTTTGCTGTGAGCACTTAAATGGTTTTCAAAGAACCTACAGAGAAAGTGTGATAAAAGT--TGAGATGCAAAAAGAAATTAAGCAAATAATATGATAAATATGTCAATACATCTAGTCAAACAATATAAATAATATTTTAGGGGGCCAAAAAAGGTAGAACCAATAGACCCAAAATTAGCTTGTAATTTGAGAGATGGGATAATATAAGTTTGTGGAGAAATTTTAGTTCTGGAACCTTGCTAAATAGAATGTAGGAGTTTAAGTGCTGATGTATTAAATTTTGCAGtggttgattttgagtaccagtctgactggattaagggatgccctgatagctggtaaagtgttaactttcctcagtgcatcagcagactctgagccggtcgtcctccccctgcaagggaaactcaggtgaactggcccttgattggaaagactgggctgccccaggtgtgcctgtgagggtatttctggagac-tggtgtgtgagttgggggactgagtgaggaacaccctccccaatgt----gggtgggcaccatcaaatagggtgggagtccagatggaagacaaaggcagagtgaggccgcatttttgctctctcacttctgggacacccttctcttgcccttgcaaaccagaattccaagctctctggcttttggaatctgagactcacacaagcagtggccaggt-------tcttcagatgtggactgagagttacatcgtcgcttccttggtcctaaggccttcaggcttgga--ttgagccaagagcctggcgttcctagttcttcagcttgcagataaacctacagcctattgtgggtctcagccttcaaaatcaagggaaccaattcccacaataagcctcttctctctggagaattctgactaaAatcttaagatctataatacaaccacagaaataataaaaatcagtata-ttgcttctaaactattagagaaa--aaagtaaatttaaatacatgaaacaggcaataaaagagaaaatagatatgggaaa-g-gtgacaaat-aaaaatattaaatattacggaaataactcaaatatatcagtaattacgataaatgcaaatgcattaaactttacatttaaaagacaaaggttttgacactggatatttttaaaaatccatatgaaatcatC-TTAAAATATATGATGTTTTAGACAAATTTAACAggaaattggccttcagatagaattatataagaaggaagttactgggcagtgctgttatgaacag-catctgtaagagaataagggaagcaagactgggcaaagaaagaagtcaatatgtgatgcagttgcaagtgaggcatcagctggtcccactgggtgtctggacctgagatggatccaaagaattgccctaacttgagaaagggggctgtgacttatgctcttacattgcccagtttcggatagggactgcttcctggataggagtgtga-ctttggcaagccaactccctttgtcagagggaaatttcttaggaaagacttagcataaagctgtAA-TTTTTT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96617704 1718 + 98384682 tgataatatgtatatgcacatatatgtatggagacat--aagtgtgtgtatgtgtgtgtg--tgtgtgtgtgtgtatagatgtaggatata----tatagagagattataGGGACCAAGAGAGGATACGGGTAGAAGGATTAGAAAGCTGTTATGATGTAGGTGGGAAGTGATGGACACAAATC-AAATGAAGGCTTTACTGTGAGCACTTAAATGGTTTTCAAAGAACCTACAGAGAAAGTGTGATAAAAGTTctgagatgcaaaaagaaattaagcaagtaatatgataaatatgtaaatacatctagtcaaacaatataaataatattttagggggccaaaaaaggtagaaccaatagacccaaaattagcttgtaatttgggagatgggataatgtaagttTGTTGAGAAATTTTAGTTCTGGAACCTTGCTAAATAGAATGTATGAGTTTAAGTGCTGATGTATTAAATTTTGCAGtggttgattttgagtaccagtctgaccggattaagggatgccctgatagctggtaaagtgttaactttcctcagtgcatcagcagactctgagcccgtcgtcctccccctgcaagggaaactcaggtgaactggcccttgattggaaagactgggctgccccaggtgtgcctgtgagggtatttctggagac-tggtgtgtgagttgggggactgagcagggagcaccctccccaatgt----gggtgggcaccatcaaatagggtgggagtccagatggaagacaaaggcagagtgaggccgcatttttgctctctcacttctgggacacccttctcttgcccttgcaaaccagaattccaagctctctggcttctggaatctgagactcacacaagcagtggccaggc-------tcttcagacgtggactgagagttacatcatcgcttccttggtcctaaggccttcaggcttgga--ttgagccaagagcctggcgttcctagttcttcagcttgcagataaacctacagcctattgtgggtctcagccttcaaaatcaagggagccaattcccacaataaacgtcttctcTCTGGAGAATTCTGACTAAAatcttaagatctataatacaaccacagaaataataaaaatcggtata-ttgcttctaaactattagataaa--aaagtaaatttaaaaacatgaaatgggctaaaaaagagaaaacagatatgggaaagg-gggacaaat-aaaaatattaaataatacagaaataactcaaatatatcagtaattacaataaatgcaaatgcattaaactttacatttaaaaggcaaaggttttgacactggatattttaaaaaATCCATATGAAATAGTC-TTAAAATATATGATGTTTTAGACAAATTTAACAggaaattggccttcagatagaactatataagaaggaagtcactgggcagtgctgttatgaacag-catctgtaagagaataagggaagcaagactgggcaaagaaagaagtcaacatgtgatgcagttgcaagtgaggcatcagctggtcccactgggtgtctggacctgagatgggtcctcagaattgccctaacttgagaaagggggctgtgacttatactcttatattgcccagtttcgaatagggactgcttcctggataggagtgtga-ctttggcaagccaactctctttgtcagagggaaatttcttaggaaagacttagcataaagctgtAA-TTTTTT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8160427 1706 - 10857215 tgat-atatgtatatgcacatatatgtgtggagacat--aagtgtgtgta--------tg--tatgtgtgtgtgtatagatgtaggatata----tatagagagattataGGGACCAAGAGAGGATACGGGTGGAAGGATTAGAAAGCTGTTATGATGTAGGTGGGAAGTGATGGACACAGATC-AAATGGAGGCTTTACTGTGAGCACTTAAATGGTTTTCAAAGAACCTACAGAGAAAGTGTGATAAAAGT--TGAGATGCAAAAAGAAATTAAGCAAATAATATGATAAATATGTCAATACATCTAGTCAAACAATATAAATAATATTTTAGGGGGCCAAAAAAGGTAGAACCAATAGACCCAAAATTAGCTTGTAATTTGAGAGATGGGATAATATAAGTTTGTGGAGAAATTTTAGTTCTGGAACCTTGCTAAATAGAATGTAGGAGTTTAAGTGCTGATGTATTAAATTTTGCAGtggttgattttgagtaccagtctgactggattaagggatgccctgatagctggtaaagtgttaactttcctcagtgcatcagcagactctgagccggtcgtcctccccctgcaagggaaactcaggtgaactggcccttgattggaaagactgggctgccccaggtgtgcctgtgagggtatttctggagac-tggtgtgtgagttgggggactgagtgaggaacaccctccccaatgt----gggtgggcaccatcaaatagggtgggagtccagatggaagacaaaggcagagtgaggccgcatttttgctttctcacttctgagacacccttctcttgcccttgcaaaccagaattccaagctctctggcttttggaatctgagactcacacaagcagtggccaggt-------tcttcagacgtggactgagagttacatcgtcgcttccttggtcctaaggccttcaggcttgga--ttgagccaagagcctggcgttcctagttcttcagcttgcagataaacctacagcctattgtgggtatcagccttcaaaatcaagggagccaattcccacaataaacctcttctctctggagaattctgactaaAatcttaagatctataatacaaccacagaaataataaaaatcagtata-ttgcttctaaactattagagaaa--aaagtaaatttaaaaacatgaaatgggcaataaaagagaaaacagatatgggaaa-g-gggacaaat-aaaaatgttaaataatacagaaataactcaaatatatcagtaattacaataaatgcaaatgcattaaactttacatttaaaagacaaaggttttgacactggatatttttaaaaatctgtatgaaatcatc-ttaaaatatatgatgttttagacacatttaaCAggaaattggccttcagatagaactatataagaaggaagttactgggcagtgctgttatgaacag-catctgtaagagaataagggaagcaagactgggcaaagaaagaagtcaatatgtgatgcagttgcaagtgaggcatcagctggtcccactgggtgtctggacctgagatggatcctcagaattgccctaacttgagaaaggtggctgtgacttatactcttatattgcccagtttcgaatagggactgcttcctggataggagtgtga-ctttggcaagccaactctctttgtcagagggaaatttcttaggaaagacttagcataaagctgtAA-TTTTTT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15556412 1708 - 23502949 tgat-atatgtatctgcatatatatgtatggaaacat--aagtgtgtgca--------tg--tatgtgtgtgtgtatagatgtaggatata----tagagagagattataGGGACCAAGAGAGGATACGGGTAGAAGGATTAGAAAGCTGTTATGATGTAGGTGGGAAGTGATTGACACAAATC-AAATGGAGGCTTTACTGTGAGCACTTAAATGGTTTTCAAAGAACCTACAGAGAAAGTGTGATAAAAGTTctgagatgcaaaaagaaattaagcaaataatatgataaatatgtaaatacatctagtcaaacaatataaataatattttagggggccaaaaaaggtagaaccaatagacccaaaattagcttgtaatttgggagatgggataatgtaagttTGTTGAGAAATTTTAGTTCTGGAACCGTGCTAAATAGAATGTATGAGTTTAAGTGCTGATGTATTAAATTTTGCAGtggttgattttgagtaccagtctgactggattaagggatgccctgatagctggtaaagcgttaactttcctcagtgcatcagcagacgctgagcccgtcgtcctccccctacaaggaaaactcaggtgaactggcccttgactggaaagactgggctgccccaggtgcacctgtgagggtgtttctagagac-tgatgtgtgagttggggaactgagtggggaacaccctccccaatgt----gggtgggcaccatcaaatagggtgggagtccagatggaagacaaaggcagagtgaggcggcatttttgctctctcacttctgtgacacccttctcttgcccttgcaaaccagaattccaagctctctagcttttggtgtctgagactcacacaagcagtggccaggc-------tcttcagacgtggactgagagttacatcatcgcttccttggtcctaaggccttcagacttgga--ttgagccaggagcctggcgttcctagttcttcagcttgcagataaacctacagcctattgtgggtctcagccttcaaaatcaagggagcgaattcccacaataaacctcttctctctggagaattctgactaaAatcttaagatctataatacaaccacagaaataataaaaatcagtata-ttgcttctaaactattagagaaa--aaagtaaatttaaaaacatgaaacaggcaataaaagagaaaacagatatgggaaa-g-gggacaaat-aaaaatattaaataatacagaaaaaactcgaatatatcagtaattacaataaatgcaaatgcattaaactttacatttaaaagacaaagcttttgacactggatatttttaaaaaTCCATATGAAATAGTC-TTAAAATATATGATGTTTTAGACAAATTTAACAggaaattggccttcagatagaactatgtaagaaggaagttactgggcagtgctgttatgaacag-cgtctgtaagagaataagggaagcaagattgggcaaagaaagaagtcaacatgtgatgcagttgcaagtgaggcatcagctggtcccactgggtttctggacctgagatggatcctcagaattgccctaacttgagaaagggggctgtggcttatactcttatattgcccattttcgaatagggactgcttcctggataggagtgtga-ctttggcaagccaactctctttgttagaggaaaatttcttaggaaagacttagcataaagctgtAA-TTTTTC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169824337 1676 + 171630274 AGAt-atatgtatatgcac--------------------acgtgtgtgta------tgta--tatgtgtgtgtgtatGG------GATACAGATGTGTAGG-AGATTGTAGGGAGAAAG-AGGGGTGCAGGCAGAAGGATTAGAAAGCTGTGATGATGTAGGGGGGGCGTGATGAGCATAAATCAAAATGGAGAC-TCACCGCGAGCACTgaaatga-tttcaaagaacgtacagaaagagtgtgataagagttatgaggtgtaaaaagaaattaagcaggtaacatgataaatattcgactgcatctagtcgaacaacataaataatattttgcagggctgaaaaagatagaaccaatagacccaaaatcagcttgtaagttggcagacaggataatgtaagttTGTTAAGAAACTTCAGTTCTGCAACCTTGCTAAATG-AATGTATGGCTTTAATTCCTGATGCGTTGAATTTTGCAGTTgttaattctgggtgccaatctgactggattaaggggtgccctcctagctggcaaagcattacctttcctcagtgtatcagcagtctctgagcctgtcctcctc---ctgcaagggaaaccca--------ggcctttgactggcgagacggggctgccccaggtgtgcccatgaaggtgtttccagagac-cggtgtgtgacttgggggactgagtggggaacatcctccccagtgt----gcgtgggcactatcaaatcgagccggagtccagattgaagacaaagacagagtgaggatgaatttgtactctctctcttctgggacacacttctccagcccttgcacaccaggatgccaagctctctgggttttggaatctgagactcacttaa-----ggccaggctcttgggtcttcacatgtgaactgagagttataccatcgcttccttggtcctgagacctttggtcctgagacctgagccaggagcctggcatccctagttcttcagcttgtagat-ggcctacagcctattgtgggtctcagccttcataatca-gggagccacgtcccacaataaacctcttctcTTCCAAGAATTCTGACTAGGACCTTAGGATTTATAATACAGCCACAGAAATAATAGAAATCAATATA-TTACTTCTAAATGCTTAGAGAAAAGAAAGCAAATTTaaaaacattaaataggcaataaaagagaaaaaagataagggaaa-gagggacaaataaaaaataataaataatacagaaataactcaaacatatcagtaattacaagaaatgcaaatgtattacattttacatttaaaagacaaaggttttaacactggataTTTTT-AAAATCCATATGAAATTGTC-TTAAAACATATGATATTTTAGACAAGTTTAACAggaaattggctttgaggtagaaatctgtaagaaggaagtttctgggcagtgctcttacgaacaa-aatctgtaagagaataaggaaagcaacattaagcaaagaaagaagtcaaaaagtggtgcaggggtca-tgaggcatcagccggtcctactgggcgttt-gacctgagatgcaccctcagaatcgccctgactggagaaa--gggccgcatcttacagtcctgtattgcccggttttgaatgggaactgcttcccagataggagtgtgacctttggcaagccagttctcttggttagaggaaaatttcttgggaaagacATGGTATGAAACTGTAA-TTTTT- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1248512 1718 - 2905041 agat-atatgcatatgcacatatatgtattgagagctatatgtgtgtgtg------tgta--tatgtgggtatatatag------gatgtagatgtgtagatagatTGTAGGGAGAAAG-AGGGCTACAGGTAGAAAGATTAGAAAGCTGTAATGACGTAGGTGGGAAGTGATGAGCATTAATCAAAACGGAGACTTCACTGTGAGCACTGAAATGATTTTCAAAAAACCTACAGAAAGAGTGTGATAAAAGTTCTGAGATGCAAAAGGAAATTAAGCAAATAATATGATAAATATTTGACTACATCTAGTCAAACAACGTAAATAATATTTTGTGGGGCTGAAAAAGATAGAACCAATAGACCCAAAATCAGGTTGTAAGTTGGCAAATGGGATAATGTAAGTTTGTTACGAAATTTCAGTTCTGCAACTGCGCTAAATACAATGTATGGCTTTAAGTCCTGATGTATTAAATTTTGCAGTTAttaattctgggtgccaagctggct-gattaagggatgtcctaagagctggcaaagcgttagctgtcctcattgtatcagcagtctctgtgcctgtcctgctc-cgctgcaggggaagcccaggtgatctggcctttgactggcaagactgggctgccccagatgtacccctgagggtgtttccagagac-cggcttgtgagttgggggactgagtggggaacgtcctccccagtgtgggggggggggcaccatcaaatcgagcgggagtccagatagaagacaaagacagagtgaggctgaatttttgctctggctcttctgggacatgcttctcctgtcctggcacaccagaattccaagctctctcgcttttggaatctgagactcacataagtagtggacaggctcttgggtctttaaatgtgaactgagagtttcaccatcgcttccttggtcctgagacctttggacttgga--ttgagccaggagcctggcgtccctagttcttcagcttgtagat-ggcctacaacttattgtgggtctcagccttcataatcaggggagccacatcccacaataaacctcttctcTTCAGAGAATTCTGACTAAAACCttaagatttataatacaaccacagaaataataaaaatcagtgta-ttacttctaaactcttagagaaa--aaagtcaatttaaaaacatgaaacaggcaataaaagagaaaaaagatatggggaa-gagggacaaataaaaaatattaaataatacaaaaataactcaaacatatcagtaattacaagaaatgtaaatgtattaaattttgcatttgaaagacaaagattttaacactggatATTTTT-AAGATCCATATAAAATTGTC-TTAAAATATATGATATTTTAGACAAGTTTAACAggaaattggctttgagttagaaatatacaagaaggaagttactgggcagtgctcttatgaacag-catctgtaagagaataaggaaagcaagactaagcaaagaacgaagtcaaaatggggtgcagtggcaa-tg-ggcgtcagctggtcccactgggtatttggacctgagatggatcctcagaattgccctaactggagaaagggggctgcgtcttacagtcctataacacccagtttcaaataggaactgcttcctggataggagtgtgacctttggcaagacaattctctttgttagaggaaaatttcttggaaaagacttagcctgaagctgtAATTTTTT- i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1199582 1686 - 2164891 AGAT-ATAT-TATATGCACATATATGTATTAAGACCTACGTGCGTGTGTA------TGTT--TATGTGTGTATATGTAG------GAT----------------ATCGTAGGGAGAAAG-AGGGGCACAGGTAGAAGGATTAGAAAGCTGTAATGATGTAGGTGGGAAGTGATGAGCGTAAATCAAAACGGAGACTTCACTGTGAGCACTGAAATGATTTTCAAAGGACCTACAGAAAGAGTTTGATAAAAATTctgagatgcaaaaagaaattaagcaaataatatgataaacatttgactacatctagtcaaacaACATAAATAATATTTTGCGGGGCTGAAAAAGATAGAATCAATAGACCCAAAATCAGCTTGTAAGTTGGCAAATGGGATAACGTAAGTTTGTTAAGAAATTTCAGTTCTGCAACCTTGGTAAATATAATGCATGACTTTAAGTACTGATGTATTAAATTTTGCAGTTgttaattctgggtgcgaatctgactggattaagggatgccctaatc-ttggcaaagcgttagctttcctcagtgtatcagcaatctctgagcctgtcctcctc-tgctgcaagggaaactcaggtgaactgtcctttgactggcaagactgggctgccccaggtgtgcccatgagggtgtttccagacac-cggcgtgtgagttgagggactgagtggggaatgtcctccccagtgt-----ggggggcaccatcaaatcgagccggagtccacatagaaaacaaagacagagtgaggccgaatttttgctctctctcttctgggacatgcttctcctgcccttgcacaccagaattccaagctctctggcttttggaatctgagacccgcataaatagtggccaggctcttgggtcttcaaacgtgaactgagagttacaccgtcacttccttggacctgagacctttggacttgga--ttgagccaggagcctggcgtccctagttcttcagcttgtagat-ggcctacaacctcttatgggtctcagcctt-atcatcaggggagccacatcccacaataaacctcttctcTTCAGAGAATTCTCACTAAAACCttaagatttataatacaaccacagaaataataaaaatcagtctt-ctacttctaaactcttagagaaaa-aaagtaaatttaaaaacatgaaac--gcaataaaagggaaaaaagagatgtgaaa-gaggggcaaataaaaaacattaaataatacaaaaataactcaaacatatcagtaattacaagaaatgcaaatgtattaaattttacatttaaaagacaaagattttaacagtggatATTTTT-AAGATCCATATGAAATTGTC-TTAAAATATGTGATATTTTAGACAAGTTTGACAggaaattggctttgagatagaaatatataagaaggaagttactgggcagtgctcttacgaatag-catctg--------taaagaaaggaagattaagcaaagaaagaagtcaaaatgtggtgcagtggcaa-tgaagcctcagctggtcccactgggtatttggacctgagatggatcctcagaattgccctaactggagaaagggggctgcatcttacagtcctatattgcccagtttcaaataggaactgcttcctggataggagtgtgacctttggcaagtcaattctctttgttagaggaaaatttcttggaaaagacttagcatgaagctgtAA-TTTTT- i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1446258 1643 - 1813869 AGAT-ATATGTATATGCACATATATGCATTGAGACCT--ACgtgtgtgta------tgta--tatgtgtgtatgtatag------gatgtagatgtgtaGAGAGATTGTAGGGAGAAAGAAGGGATACAGGCAGAAGGATTAGAAAGCTGTAATGATGTAGGTGGGAAGTGATGAGCAGAAATCAAAATGGAGGCTTCACTGTGAGCACTGAAATGATTTTCAAAGAACCTACAGAAAGAGTGTGATAAAAATTCTGAGATGCAAAAAGAAATTAAGCAAAGAATATGACAAATATTTGACTGCATCTAGTCAAACAACGTAAATAATGTTTTACAGGGCTGAAAAAGATAGGACCAATAGACCCAAAATCAGCTTGTAAATTGGCAAATGGGATAATGTAAGTTTGTTCAGAAATTTCAGTTCTGCAACCTTGCTAAATAGAATGTATGACTTTAAGTACTGATGTATTAAATTTTGCAGTTgttaattctgggtgccagtctgact-gattaagggatgccctaatagctggcaaagcgctaactttcctcagtgtatcagcagtctctgagcctgtcctccac-cgctgcaagggaaacccaggtgaactggcctttgactggcaagactgggctgccccagctgtgcccatgagggtgcttcaggagacgcggtgt-tgagttg-gggactgagtgcagaacgtcctccccagcgc-----ggcgggcaccatcaaatcgagcgggagtccagatagaacacaaagacagagtgaggccgaagttttgctccctctcttctgggacacgcttctcctgcccttgcacaccagaattccaagctctctggcttttggaatctgagactcacataagtagtggcc-gcctcttgggtcttcaaatgtgaa-tgagagtcacagcatcgcttccttggtcctgcgaccttt-gacttgga--ttgagccgaggagctggtgtcccgagttcttcagcttgcag-t-ggcctacaacccattgtgggtctcagccttcataatcg-gggagccacatcccacaagaaatctcttctcTTCAGAGAATTCTGACTAAGACCTTAAGATTTATTATACAACCACAGAAATAATAAAAATCAGTATATTTACTTCTAAACTCTCAGAGAA---AAAGCAAATTTTAAAACATAAAACaggcaataaaagagaaaaaagataagggaaa-gaggga-----aaaaaatattaaataatacagaaataactcaaatatatccgtaattacaagaaatgcaaatgta-taaattttacatttaaaagacaaagattttaacactggctaTTTTT-AAGAGCCATATGAAATTGTCTTTAAAATATGTGATATTT--AACAAGTTTAACAggaaattggctttgagatagaaatatataagaaggaagttactgggcagt-ctcttatgaacagccatctgtaagagaa-------------------------------------------------------gaggcatcagtccgtcccactgggtgtctggacctggagtggatcctcagaactg-cctaactggggaaagggggctgcatctgacagtcctgtattgctcagtttcgaataggaactgcttcctggataggagtatgacctttggcaagccaattctctttcttagaggaaaaattc-tgggaaagacttagcatgaagctgtAA-TTTTT- i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10913867 1567 - 12073884 I e dasNov3.JH569188 489189 2516 + 760995 I e canFam3.chr1 56118838 15999 + 122678785 I a score=131398.000000 s hg38.chr6_KB021644v2_alt 22077 12 + 185823 AAAAAAGAAGAC- s panTro5.chr6 173490350 12 + 175400573 AAAAAAGAAGAC- i panTro5.chr6 C 0 C 0 s panPan2.chr6 171740403 12 + 173848474 AAAAAAGAAGAC- i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11425521 12 - 12463322 AAAAAAGAAGAC- i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156251600 12 + 157873769 AAAAAAGAAGAC- i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170277693 12 + 172585720 AAAAAAGAAGAC- i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169023302 12 - 170955103 AAAAAAGAAGAC- i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8310541 12 + 10161646 AAAAAAGAAGAC- i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1340098 12 + 3144229 AAAAAAGAAGAC- i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96619422 12 + 98384682 AAAAAAGAAGAC- i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8162133 12 - 10857215 AAAAAAGAAGAC- i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15558120 12 - 23502949 AAAAAAGAAGAC- i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169826013 12 + 171630274 AAAAAAGAAGGC- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1250230 12 - 2905041 AAAAAAGAAGGC- i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1201268 13 - 2164891 AAAAAAGAAGGCA i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1447901 12 - 1813869 AAAAAAGAAGGC- i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10915434 12 - 12073884 aaaaaaaaaaaa- i otoGar3.GL873575 I 1567 C 0 e dasNov3.JH569188 489189 2516 + 760995 I e canFam3.chr1 56118838 15999 + 122678785 I a score=975336.000000 s hg38.chr6_KB021644v2_alt 22089 93 + 185823 AAAAT-CAAAGCAGTA----CCTAGGAATTAATATACAAAAAATGTGCAAAACTTTTATGCAGGAAATTATTATAGCAAAGTATTGGTATAGGACAAG s panTro5.chr6 173490362 93 + 175400573 AAAAT-CAAAGCAGTA----CCTAGGAATTAATATACAAAAAATGTGCAAAACTTTTATGCAGGAAATTATTACAGCAAAGTATTGGTATAGAACAAG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171740415 93 + 173848474 AAAAT-CAAAGCAGTA----CCTAGGAATTAATATACAAAAAATGTGCAAAACTTTTATGCAGGAAATTATTACAGCAAAGTATTGGTATAGAACAAG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11425533 93 - 12463322 AAAAT-CAAAGCGGTA----CCTAGGAATTAAAATACAAAAAGTGTGCAAAACTTTTATGCAGGAAATTATTACAGCAAAGTATTGGTATAGGACAAG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156251612 93 + 157873769 AAAAT-CAAAGCAGTA----CGTAGGAATTAATATACAAAAAATGTGCAAAACTTTTATGCAGAAAATTATTACAGCAAAGTATTGGTATAGGACAAT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170277705 93 + 172585720 AACAT-CGAAGCAGTA----CCTAGGGACTAATATACAAAAAGTGTGCGAAAGTTTTATGCAGGAaattattacagcgaagtattgatataggacaag i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169023314 93 - 170955103 AACAT-CGAAGCAGTA----CCTAGGGACTAATATACAAAAAGTGTGCGAAAGTTTTATGCAGGAaattattacagcgaagtattgatataggacaag i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8310553 93 + 10161646 AACAT-CGAAGCAGTA----CCTAGGGACTAATATACAAAAAGTGTGCGAAAGTTTTATGCAGGAaattattacggcgaagtattgatataggacaag i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1340110 93 + 3144229 AACAT-CGAAGCAGTA----CCTAGGGACTAATATACAAAAAGTGTGCAAAAGTTTTATGCAGGAaattattacagcaaagtattgatataggacaag i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96619434 93 + 98384682 AACAT-CGAAGCAGTA----CCTAGGGACTAATATACAAAAAGTGTGCAAAAGTTTTATGCAGGAaattattacagcaaagtattgatataggacaag i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8162145 93 - 10857215 AACAT-CGAAGCAGTA----CCTAGGGACTAATATACAAAAAGTGTGCAAAAGTTTTATGCAGGAaattattacagcaaagtattgatataggacaag i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15558132 93 - 23502949 AACAT-CAAAGCAGTA----ACTAGCGACTAATATACAAAAAGTGTGcaaaacttttatgcaggaaattattacagcaaagtattggtatagaacaag i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169826025 93 + 171630274 AAAAT-CAAAGCCGTA----CCTAGAAATTAATATACAGAAAGTGTGCAAAAGTTTCACGCAGGAGattgcggcagcaaagcactggcatagggcaag i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1250242 93 - 2905041 AAAAT-CAAAGCCATA----CCTAGAAATTAATATACAAAAAGTGTGCAAAAGTTTTATGCAGGAGATTGCTacagcaaagcactggcataggacaag i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1201281 93 - 2164891 AAAAT-CAAAGCCGTA----CCTAGAAATTAATATACAAAAAGTGTGCAAAAGTTTTATTCAGGAGATTGTTACAGCAAAGCACTGTCATAGGACAAG i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1447913 94 - 1813869 AAAATCCGAAGCTATA----CCTAGAAATTAATATACAAAAAGTGTGCAAAGGTTGTACACGGGAGATTGCTGCAGCAAAGCACTGGCATAGGACAAG i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10915446 91 - 12073884 AAAAT-CAAAGCAATA----CCTATAAATAAATATGCCAAACGTGTGCAAAACTTTTATGGAGAAAAATATTacagtatagagtgagcatagggaa-- i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56134837 95 + 122678785 AAAAC-AAAAGCAATAATTTTCTAGGAATAGATATAATAAAAGTGTGCAAAACTTGCAAGCA--Aaattattatagcacgatgttgttatagggagag i canFam3.chr1 I 15999 C 0 e dasNov3.JH569188 489189 2516 + 760995 I a score=8491276.000000 s hg38.chr6_KB021644v2_alt 22182 957 + 185823 TAAAATCAACTAATGCAAAACAAGAAAA----ACTTCAGAAACAGACTCAGGGCATTATGGAAGTATTA----TTTAAGACAGAattaactttgcagatcagtgggggaaaggatggacttcaacaaatagcagtg----agacacttggttagccctaggaaaaaatacaGtgaaattctatccttcctttgaactatacacaataattaagataatcaaagtgaaagacagaatacactattag-aacataatttggaatttatatttatggcctcagaaaagggaacggcttattaaacaggag----ataaagaa--acagagaaaagattgatatatgcaactacaatgaaattcataacttccattcactaaaagacaccataa-agacagtgaaataaacgaggcacaaaa----------------------------ggagataaaa------tatttaccacacatgtaactgacatagattggaat-cataatacctaaattagtcctacaaaaagccaaagacaagctcatac--aaaatgggcataaaatttgaatatgaactta---aaggcaaaaatggataatccaataaacacatgaaaatgtttgccaattgaaatcatagaaataaaaacaaaaaccacagtgagatactacttcacatccatcagactgccaaaatgtgcaacgtctgacaatacttggagttataaaggatgtggaacaaga-aaacacttgtgtgctgtgggtgggagaggaaatctgcacacttgac-tacagcacagggtggccg--------------------------------------------catctcctaacacttg-ga-ggacctggactttgatgtagccattgcactccaagctgtgggacctagagaaactattgcaggcgagcgtgaggtgacaggtacaatatcacagaaacagagtttgtaaaaatacataagtggaaacaaccaaaatgtgcatgg--agtagaatggatgaatcaattcccgtatattagcataacaaaatacta s panTro5.chr6 173490455 957 + 175400573 TAAAATCAACTAATGCAAAACAAGAAAA----ACTTCAGAAACAGACTCAGGGCATTATGGAAGTATTA----TTTAAGACAGAattaactttgcagatcagtgggggaaaggatggacttcaacaaatagcagtg----agacacttggttagccctagg-aaaaaTACagtgaaattctatccttcctttgaactatacacaataattaagacaatcaaagtgaaagacagaatacactattag-aacataatttggaatttatatttatggcctcagaaaagggaatggcttattaaacaggag----ataaagaa--acagagaaaagattgatatatgcaactacaatgaaattcataacttccattcactaaaagacaccataa-agacagtgaaataaacgaggcacaaaa----------------------------ggagataaaa------tatttaccgcacatgtaactgacatagattggaat-cataatacctaaattagtcctacaaaaagccaaagacaagctcatac--aaaatgggcataaaatttgaatatgaactta---aaggcaaaaatggataatccaataaacacatgaaaatgtttgccaattgaaatcatagaaataaaaacaaaaaccacagtgagatactacttcacatcaatcagactgccagaacgtgcaacgtctgacaatactgggagttataaaggatgtggaacaaga-aaacacttgtgtgctgtgggcgggagaggaaatctgcacacttgac-tagagcacagggtggcca--------------------------------------------catctcctaacactcgaga-ggacctggactttgacatagccattgcactccaagctgtgggacctagagaaattattgcaggcgagcgtgaggtgacaggtacaatatcacagaaacagagtttgtaaaaatacataagtggaaacaaccaaaatgtgcatgg--agtagaatggatgaatcaattcccatatattagcataacaaaatacta i panTro5.chr6 C 0 C 0 s panPan2.chr6 171740508 957 + 173848474 TAAAATCAACTAATGCAAAACAAGAAAA----ACTTCAGAAACAGACTCAGGGCATTATGGAAGTATTA----TTTAAGACAGAattaactttgcagatcagtgggggaaaggatggacttcaacaaatagcagtg----agacacttggttagccctagg-aaaaaTACagtgaaattctatccttcctttgaactatacacaataattaagacaatcaaagtgaaagacagaatacactattag-aacataatttggaatttatatttatggcctcataaaagggaatggcttattaaacaggag----ataaagaa--acagagaaaagattgatatatgcaactacaatgaaattcataacttccattcactaaaagacaccataa-agacagtgaaataaacgaggcacaaaa----------------------------ggagataaaa------tatttaccgcacatgtaactgacatagattggaat-cataatacctaaattagtcctacaaaaagccaaagacaagctcatac--aaaatgggcataaaatttgaatatgaactta---aaggcaaaaatggataatccaataaacacatgaaaatgtttgccaattgaaatcatagaaataaaaacaaaaaccacagtgagatactacttcacatcaatcagactgccagaacgtgcaacgtctgacaatactgggagttataaaggatgtggaacaaga-aaacacttgtgtgctgtgggcgggagaggaaatctgcacacttgac-tagagcacagggtggcca--------------------------------------------catctcctaacactcgaga-ggacctggactttgacatagccattgcactccaagctgtgggacctagagaaattattgcaggcgagcgtgaggtgacaggtacaatatcacagaaacagagtttgtaaaaatacataagtggaaacaaccaaaatgtgcatgg--agtagaatggatgaatcaattcccatatattagcataacaaaatacta i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11425626 958 - 12463322 TAAAATCAACTAATGCAAAACAAGAAAA----ACTTTAGAAACAGACTCAGGGCATTATGGAAGTATTA----TTTAAGACAGAattaactttgcagatcagtgggggaaaggatggacttcaacaaatagcagtg----agacacttggttagccctaggaaaaaatacaGtgaaattctatccttcctttgaactatacacaataattaagataatcaaagtgaaagacagaatacactattag-aacataatttggaatttatatttatggcctcagaaaagggaatggcttattaaacaggag----ataaagaa--acagaaaaaagattgatatacgcaactataatgaaattcataacttccattcactaaaagacaccataa-agacagtgaaataaacgaggcacaaaa----------------------------ggagataaaa------tatttaccacacatgtaactgacatagattggaat-cataatacctaaattagtcctacaaaaagccaaagacaagctcatac--aaaatgggcataaaatttgaatatgaactta---aaggcaaaaatggataatccaataaacacatgaaaatgtttgccaattgaaatcatagaaataaaagcaaaaaccacagtgagatactacttcacatccatcggactgccaaaatgtgcaacgtctgacaatactgggagttataaaggatgtggaacaaga-aaacacttgtgtgctgtgggtgggagaggaaatctgcacacttgac-tagagcacagggtggccg--------------------------------------------catctcctaacactcgaga-ggacctggactttgacgtagccattgcacttcaagctgtgggacctagagaaactattgcaggtgagcgtgaggtgacaggtacaatatcacagaaacagagtttgtaaaaatacataagtggaaacaaccaaaatgtgcacgg--agtagaatggatgaatcaattcccgtatattagcataacaaaatacta i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170277798 1000 + 172585720 taaaatcaactaatgcaaaacaagaaaa----gcttcagaaacagactcagggcattatggaagtatta----ttttagacacaattaactttgcagatcagtgggggaaaggatgaacttcaacgaagagcagtg----agacacttggttagccccaggaaaaaacacagtgaaattctatccttcctttgaactatacacaataattaagacaatcaaagtgaa----agaatacactattag-aacataatttggaatttatatttatggcctcagaaaagggaatggctaattaaataggac----ataaagaaacacagagaaaagattgatatacgcagctacaatgaaattcgtaacttccgttcactaaaagacaccataa-agacagtgaaataaacaaggcacaaaa----------------------------ggagataaag------tatttgctacacatgtaactgacagagattggaat-cataatacataagttagtcctacaaaaagccaaagacaagctcatac--aaaatgtgcataaaatttgaatacaaactta---aaggcaaaaatggataatccaataaggatatgaaaatatttgccaattgaaatcatagaaataaaaacaaaaaccacaatgagatactacttaacgtccatcagactgccaaaatgtgcaatgtctgacaatactgggagttataaaggatgtggaacaaga-aaacacttgtgtgctgtgggcgggaaaataaatctgcacacttgac-tagagcacagggtggctgcatctcctaatactcgagaggacctggattttgacgtatggctgcatctcctaacactcgaga-ggacctggattttgacatagccattgcactccaagctgtgggacctagagaaactattgcacatgagcgcgaggtgacaggtacaatatcacagaaacagagtttataaaaatacacaaggggaaacaaccaaaatgtgcatcg--agtagaacggatgaattgattcccatatatcagcataacagaatacta i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169023407 1000 - 170955103 taaaatcaactaatgcaaaacaagaaaa----gcttcagaaacagactcagggcattatggaagtatta----ttttagacacaattaactttgcagatcagtgggggaaaggatgaacttcaacgaagagcagtg----agacacttggttagccccaggaaaaaacacagtgaaattctatccttcctttgaactatacacaataattaagacaatcaaagtgaa----agaatacactattag-aacataatttggaatttatatttatggcctcagaaaagggaatggcttattaaataggac----ataaagaaacacagagaaaagattgatatacgcagctacaatgaaattcgtaacttccgttcactaaaagacaccataa-agacagtgaaataaacaaggcacaaaa----------------------------ggagataaag------tatttgctacacatgtaactgacagagattggaat-cataatacataagttagtcctacaaaaagccaaagacaagctcatac--aaaatgtgcataaaatttgaatacaaactta---aaggcaaaaatggataatccaataaggatatgaaaatatttgccaattgaaatcatagaaataaaaacaaaaaccacaatgagatactacttaacgtccatcagactgccaaaatgtgcaatgtctgacaatactgggagttataaaggatgtggaacaaga-aaacacttgtgtgctgtgggcgggaaaataaatctgcacacttgac-tagagcacagggtggctgcatctcctaaTACTCGAGAGGACCTGGATTTTGACGTATGGCTGCATCTCCTAACACTCGAGA-GGACCTGGATTTTgacatagccattgtactccaagctgtgggacctagagaaactattgcacatgaacgcgaggtgacaggtacaatatcacagaaacagagtttataaaaatacacaaggggaaacaaccaaaatgtgcatcg--agtagaacggatgaattgattcccatatatcagcataacagaatacta i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8310646 1000 + 10161646 taaaatcaactaatgcaaaacaagaaaa----gcttcagaaacagactcagggcattatggaagtatta----ttttagacacaattaactttgcagatcagtgggggaaaggatgaacttcaacgaagagcagtg----agacacttggttagccccaggaaaaaacacagtgaaattctatccttcctttgaactatacacaataattaagacaatcaaagtgaa----agaatacactattag-aacataatttggaatttatatttatggcctcagaaaagggaatggcttattaaataggac----ataaagaaacacagagaaaagattgatatacgcagctacagtgaaattcgtaacttccgttcactaaaagacaccataa-agacagtgaaataaacaaggcacaaaa----------------------------ggagataaag------tatttgctacacatgtaactgacagagattggaat-cataatacataagttagtcctacaaaaagccaaagacaagctcatac--aaaatgtgcatgaaatttgaatacaaactta---aaggcaaaaatggataatccaataaggatatgaaaatatttgccaattgaaatcatagaaataaaaacaaaaaccacaatgagatactacttaacgtccatcagactgccaaaatgtgcaatgtctgacaatactgggagttataaaggatgtggaacaaga-aaacacttgtgtgctgtgggcgggaaaataaatctgcacacttgac-tagagcacagggtggctgcatctcctaacactcgagaggacctggattttgacgtatggctgcatctcctaacactcgaga-ggacctggattttgacatagccattgtactccaagctgtgggacctagagaaactattgcacatgaacgcgaggtgacaggtacaatatcacagaaacagagtttataaaaatacacaaggggaaacaaccaaaatgtgcatcg--agtagaacggatgaattgattcccatatatcagcataacagaatacta i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1340203 1000 + 3144229 taaaatcaactaatgcaaaacaagaaaa----gcttcagaaacagactcagggcattatggaagtatta----ttttagacacaattaactttgcagatcagtgggggaaaggatgaacttcaacaaagagcagtg----agacacttggttagccccaggaaaaaacacagtgaaattctatccttcctttgaactatacacaataattaagacaatcaaagtgaa----agaatacactattag-aacataatttggaatttatatttatggcctcagaaaagggaatggcttattaaataggac----ataaagaaacacagagaaaagattgatatacgcggctacaatgaaattcgtaacttccgttcactaaaagacaccataa-agacagtgaaataaacaaggcacaaaa----------------------------ggagataaag------tatttgctacacatgtaactgacagagattggaat-cataatacataagttagtcctacaaaaagccaaagacaagctcatac--aaaatgtgcataaaatttgaatacaaactta---aaggcaaaaatggataatccaataagcatatgaaaatatttgccaattgaaatcatagaaataaaaacaaaaaccacaatgagatactacttaacgtccatcagactgccaaaatgtgcaatgtctgacaatactgggagttatagaggatgtggaacaaga-aaacacttgtgtgctgtgggcgggagaataaatctgcacacttgac-tagagcacagggtggccgcatctcctaatactcgagaggacctggattttgacgtatggctgcatctcctaacactcgaga-ggacctggattttgacgtagccgttgtactccaagctgtgggacctagagaaactattgcacacgagcgcgaggtgacaggtacagtatcacagaaacagactttataaaaatacacaaggggaaacaaccaaaatgtgcatcg--agtagaacggatgaatcgattcccatatatcggcataacagaatacta i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96619527 955 + 98384682 taaaatcaactaatgcaaaacaagaaaa----gcttcagaaacagactcagggcattatggaagtatta----ttttagacacaattaactttgcagatcagtgggggaaagaatgaacttcaacaaagagcagtg----agacacttggttagccccaggaaaaaacacagtgaaattctatccttcctttgaactatacacaataattaagacaatcaaagtgaa----agaatacactattag-aacataatttggaatttatatttatggcctcaggaaagggaatggcttattaaacaggac----ataaagaaacacagagaaaagattgatatacgcagctacaacaaaattcgtaacttccgttcactaaaagacaccataa-agacagtgaaataaacaaggcacaaaa----------------------------ggagataaag------tatttgctacacatgtaactgacagagattggaat-cataatacataaattagtcctacaaaaagccaaagacaagctcatac--aaaatgtgcataaaatttgaatatgaactta---aaggtaaaaatggttaatccaataaacatatgaaaatgtttgccaattgaaatcatagaaataaaaacaaaaaccacagtgagatgctacttcacatccatcagactgccaaaacgtgcaatgtctgacaatactgggagttataaaggatgtggaacaaga-aaacacttgtgtgctgtgggcgggagaataaatctgcacacttgac-tagagcacagggtggctg--------------------------------------------catctcctaacactccaga-ggacctggattttgacatagccgttgcactccaagctgtgggacctagagaaactattgcacatgagcgcgaggtgacaggtacaatatcacagaaacagagtttataaaaatacacaaggggaaacaaccaaaatgtgcatcg--agtagaatggatgaatcgattcccatat-tcagcataacagaatacta i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8162238 996 - 10857215 taaaatcaactaatgcaaaacaagaaaa----gcttcagaagcagactcagggcattatggaagtatta----ttttagacacaattaactttgcagatcagtgggggaaaggatgaacttcaacaaagagcagtg----agacacttggtcagccccaggaaaaaacacagtgaaattctatccttcctttgaactatacacaataattaagacaatcaaagtgaa----agaatacactattag-aacataatttggaatttatatttatggcctcagaaaagggaatggcttattaaataggac----ataaggaaacacagag-aaagattgatatacgcggctacaatgaaattcgtaacttccgttcactgaaagacaccatag-agacagtgaagta---aaggcacaaaa----------------------------ggaggtaaag------tatttgctacacatgtaactgacagagattggaat-cataatacataagttagtcctactaaaagccaaagacaagctcatac--aaaatgtgcataaaatttgaatacaaactta---aaggcaaaaatggataatgcaataagcatatgaaaatatttgccaattgaaatcatagaaataaaaacaaaaaccacaatgagatactacttaacgtccatcagactgccaaaatgtgcaatgtctgacaatactgagagttataaaggatgtggaacaaga-aaacacttgtgtgctgtgggcgggagaataaatctgcacacttgac-tagagcacagggtggccgcatctcctaatactcgagaggacctggattttgacgtatggccacatctcctaatactcgaga-ggacctggattttgacgtagccgttgtactccaagctatgggacctagagaaactattgcacacgagcgcgaggtgacaggtacagtatcacagaaacagactttataaaaatacacaagggtaaacaaccaaaatgtgcatcg--agtagaatggatgaatcgattcccatatatcagcataacagaatacta i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15558225 1000 - 23502949 taaaatcaactaatgcgaaacaagaaaa----gcttcagaaacagactcagggcattatggaagcatta----ttttagacacaattaactttgcagatcagtgggagaaaggatgaacttcaacaaagagcagtg----agacacttggttagccccaggaaaaaatacagtgaaattctatccttcctttgaactatacacaataattaagacaatcaaagtgaa----agaatacactattag-aacataatttggaatttatatttatggcctcagaaaagggaatggcttattaaacagggc----ataaagaaacacagagaaaagactgatatacgcagctacaatgaaattcgtaacttccgttcactaaaagacaccataa-agacagtgaaataaacaaggcacaaaa----------------------------ggagataaag------tatttgctacacatgtaactgacagagattggaat-cataatacataaattagtcctacaaaaagccaaaaacaagctcatac--aaaatgtgcataaaatttgaatacgaactta---aaggcaaaaatggataatccaataaacatatgaaaatgtttgccaattgaaatcatagaaataaaaacaaaaaccacagtgagatactacttcacgtccatcagattgccaaaacgtgcaatgtctgacaatactgggagttataaaggatgtggcacaaga-aaacacttgtgtgctgtgggcgggagagtaaatctgcacacttgac-tagagcacagggtggccgcctctcctaatcctcgagaggacctggattttgatgtatggccgcatctcctaacactcgaga-ggacctggattttgacatagctgttgcactccaagctgtgggacctagagaacctattgcgcgtgagcgtgaggtgacaggtacaatatcacagaaacagagttcgtaaaaatacacaagtggaaacaaccaaaatgtgcattg--agtagaagggatgaattgattcccatatatcagcataacagaatacta i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169826118 940 + 171630274 taaaatcaacagacgcagaacaagaaaa----actc-agaaacgcactcagggcattaaggaagtatta----tgtaagacagaattcactttgcagatcagtggggaaaaggatggatatcaacaaatagacgtg----aaacccttggttagccccagggaaaaatacagtgaaattcgagctttcgtttgaactacacacagtaactaagacaatccaagtgaaagacagaatacgctattag-aacataatttggaatttatatttatggcctcagaaaagggaatggcttattaaataggac-----ataaaaaacacagagaaaagattgatatatgcaactgcaatgagatttataacttctgttcact-aaaaacaccacag-----agtgaaataaataaggcacaaaa----------------------------tgagataaag----------tgtcacacacgtaactgacgtagattggaatccataatacataaattattcctacaaaaagccaaaggccagctcatat--gaaatgagcataaaatttaaatgtgaactta---aaaagaagaatggatgctccaaaaaacatatgaaaatgtttgccaatttaaatcatagaaatataaacagaaaccacaatgagatgcaactccacacctgtcagactgccaaaacctacagtgtctgacaatcctgggccttataaaggatgtggagcagtg-aaacacgcgtgtgctgtaggcaggagagtgaatctgcacc--tgac-tagagcacgatgtggccg--------------------------------------------cacctgctaa-gctcgaga-ggacctagacttcgacgcagcagtggcactccaagctatgggacacagagaagctacagcacatgcgtgtgaggtgacagacacagtattgcagaaacagagtttgtaaaaacagacaactggaaacaactgaaatgcgcctcg--actggaataaatgaataaattgccgtgaatgag-------gactacta i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1250335 947 - 2905041 taaaatcaactgatgcaaaacaagaaaa----actt-agaaacacactcagggcattaaggaagtatta----tttaagacagaattaacttcgcaggtccgtggggaaaaggatggatttcaacaaatagaattg----aaacacttggttagcccc-ggggaaaatacagtgaaatttgagcctccgtttgaactatacacaataactaagacaatcaaagtgaaagacagaatacactattag-aacataatttggaatttatatttacagcctcagaaaagggaatggcttattaaataggacaaaaaaaaaaaaaaacagagaaaagattgatatatgcaactacaatgaaatttataacttctgtttactaaaaaacaccatag-----agtgaaataaataaggcacaaaa----------------------------tgagataaag------catttgtcacacatgtaactgacatagtttggaatccgcaatacataaattattcctacaaaaagccaaaggcaagctgatac--taaatgtgcataaaatttaaatgcgaactta---aaaagaagaatggctgatccaataaacatacgaaaatgtttgccaattgaaatcatagacatataaacagaaaccacagtgagatgcgactccacgtccgtcagactgctgaaacct--agtgtctgacgatcctgggagttataaaggatgtggaacagt--aaacacgtgtgtgctgtgggcagcagagtgaacctgcatg--tgac-cagagcacagtgtggctg--------------------------------------------cacttcctaa-gctcaaga-ggacctagacgcccacgtggcactggcactcccagc--tgggacgcagagaagctgcagtaca--agtgtgaggtgacgggcacagtattgcagaaac--agtttgtaaaaacagacaagtggaaacaaccaaagtgtgcctcc--actgggatggatgaataaattgccgtgaattagcataacagaatacta i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1201374 946 - 2164891 TAaaatcaactgatgaaaaacaagaaaa----actt-agaaacacactcagggcattaaggaagtatta----tttaagacagaattaactttgcagatcggtggggaaaaggatggatttcaacaaatagaagtg----aaacacttggttagccccagggaaaaatacagtgaaattcgagccttcatttgaactatacacaataactaagacaatcaaagtgaa----agaatatgctattag-aacgtaatttggaatttatatatacggcctcagaaaagggaacagcttattaaataggac----ataaaaaaacacagagaaaagattgatatatacaactacaataaaatttataacttctgttcactaaaaaacaccatag-----agtgaaataaataaggcacaaaa----------------------------tgagataaag------tatttgtcacacatgtaactgacatagattggaatccgcaatatgtaagttattcctacaaaaagccaaaggcaagctcataa--gaaatgtgcgtaaaatttaaatgtgaactta---aaaagaagaatggctgatccaataaacatatgaaaatgtttgccaattgaaatcatagaaatataaacagaagccacagtgagatgcgactccacatccgtcagacggccaaagcctacaaagtctgacaatcctgggagttac-aaggatgtggaacggta-aaacacgtgtgtgctgtgggcaggagagtgaatctgcacg--tgac-tagcgcacaatgtggctg--------------------------------------------cacctcctaa-gctcgaga-ggacctagacttcgatggagcactggcactccaagctgtgggacgcagagaagctacagcacg--agtgtgaggtgacggggacagtattgcagaaaccgagtttgtaaaaacagacaagcggaaacaaccaaaatgtgcctgg--actggaacggatgaataacttgccgggaattagcataaaagaatacta i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1448007 938 - 1813869 TAGAATCAACAGATGCAAAACAAGAAAA---GACTT-AGGAA--CAACCAGGGCGTTAAGGAAA-ATTA----TTTAAGACAGAATTAACTTTGCAGTTCA-TGGGGAAAAGGATGGATTTCAACAAACAGAAGTGAAAAAAACACTTGGTTAGCCC--AGGAAAAATACAGGTAAATTAGAGCCTTCATTTGAACTATACACAATAACTAAGACAATCaaagtgaaagacagaatacgctattagaaacataatttgggatttatatttacggcctcagaaaagggaatggcttattaaataggac----ataaagaaacacagagaaaagattgatatatgcaagtacaatgaaatttataacttctgttcactgaaaaacaccgtgg-----agtgaaatcaataaggcacaaaa----------------------------tgagataaag------tatttgtcacacatataactgacgtagattggaatccgtaatacataaattattcctacagaaagccaaaggcgagctcatac--gaaatgtgcataaaacttaaatgtgagctta---aaaagaagaatggatgatccaataaacatatgcaaatgtttgccaattgaaatcatagaaatataaacagaaaccacggcgagctgcgactccacatccgtcagactgccgacacctccaacggctgaccaccctgggagttataaaggatgtggaacagta-aagcatgcgtgtgctgtgggcaggagagtgaatctgcacg--tgac-tagagcaccgtgtggccg--------------------------------------------cacctcctaa-gctccaga-ggacctggacgtcgacgtagcagtggcactccaagctgtgggacgcagggaggctacggcacacgagtgtgaggagacgggcacagtattgcagaaac---------------agacaagtggaaacaaccaaaatgcgcctgg--actggaacggatgaataaattgccgtggattggcgtaacagaatacta i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10915537 891 - 12073884 -aaaatcagctaatggaagacaataata----aactcagaaacagaatt--ggaattatggctgtataa----ttgaagacagaattaacttttcagattagtgggagaaatgttgaacttcaaccaataatgctg----aaacagttggttacccctgggggaaatta-agtgaaattcaatctaccccttgaactgcacacaataattaaaacaataaaagtgaaagacaaaatataccattag-tgtataatttgggatttatatttatggcctcaggaaagtgaatgctttattaaacaggac----ataaa-aaccatcgagaaaagattgatacactcaactacagtaaaattaataacttctgttcactaaaaggcaccgcaa-agagagagaaataaacaaggcacgaaataccttttcctcttaaatatttaaatattaatacaaaatattgatattttccacacatgtaactgacatagagtggaatccgtaatatgtaaattatccctataaaaa-------ataagccaacac--aaaatgtgcataaaatttcaatatggatttaaagaagatgaaaatgaaggatccaataaacatacaaaaacatttgcaatctaaaatcatggaaataaaaattaaaaccacaatgagacgctgtttcacatccgtcaggctgatcaaactcacaatgtctgaccgcattaggagcgg-gaaggccgtgcagcggtaccaacccttgcac-ccgtgggtgggagggtgagt---------------------CAGAGGAGATG--------------------------------------------CAC-----------------AGAC--------TGATGCAG------------AAACTGCGGGA---AGAG--------------GAGCCTGGGGGCACAGGTGCAATTCCACAGGAATGTGATTTGTGGAAACAGAC-GCTGGAAACAA-------GAGTGTCC--ACCAGGAGTGAAAAGGCAATCGCTGTGTGTTAGCA------------- i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56134932 948 + 122678785 aaaacttaacttatggaagctaataaaaaagaaatccagaaacagactcatagaatcagggaagtgctggtgtgttaagatagaatgaactttgcagattagtggaggaaaggatggactccagcagagagggctg----aaacaatcggccatcctcagggaattaaagggagaaaatctatcc----cttgtgccatgaacagcaatttaaacaatgaatgtgaaagacggaattcactagtag-aagataattcggaa-tcacattcatggcctcagggaaggaaatggtttatccaatgggac----agagacac-cattgacataaagtgaatgtactcaactacagtgagattagtgacttctgttcactaagagacaccaaaaaaaagagtaaaataaataaggaataaaa----------------------------tgggacagaa------tatttgccacatatgtaagagacatccactggaatccttaataggtaaatcattcctacacaaagtaaaagccaagtcaataccaaaaaagtacataatgttccaatagaaatttaaagaagatgacactggattgtccaagtcacatgtgaaggtatttacaacctacaatcatagaaataaaaatt-aaaccacaatgaaatactgttttaaattcctcaaattggcaaaacttacaac-tgcgacaatactgagagctgagaagaatacggagcaatagaaacatttgtgtgctgtgtgggggacagcaaattaacacaatcaccacagaacacaatgcgactc--------------------------------------------catctagtaacctttgagatgggcatggactttgatttagcggacacacttgcaggtaaggaac--agagaaaccatcttgca--aacgtg------------cattatcgtggaagcactgcttgtgaaatcaaac--ctggaaacaacaaaaaggttcactgaaagcagaacagcc-aacaaatctc--tatgttaacacaacagaata--- i canFam3.chr1 C 0 C 0 e dasNov3.JH569188 489189 2516 + 760995 I e nomLeu3.chr3 156251705 0 + 157873769 C a score=237544.000000 s hg38.chr6_KB021644v2_alt 23139 31 + 185823 tcatgcagtaaaaattaatgaattacagtga s panTro5.chr6 173491412 31 + 175400573 tcatgcagtaaaaattaatgaattacagtga i panTro5.chr6 C 0 C 0 s panPan2.chr6 171741465 31 + 173848474 tcatgcagtaaaaattaatgaattacagtga i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11426584 31 - 12463322 tcatgcagtaaaaattaatgaattacagtga i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170278798 31 + 172585720 tcatgcagtaaaaattaatgaattacagtga i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169024407 31 - 170955103 tcatgcagtaaaaattaatgaattacagtga i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8311646 31 + 10161646 tcatgcagtaaaaattaatgaattacagtga i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1341203 31 + 3144229 tcatgaagtaaaaattaatgaattacagtga i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96620482 31 + 98384682 tcatgcagtaaaaattaatgaattacagtga i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8163234 31 - 10857215 tcatgaagtaaaaattaatgaattacagtga i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15559225 31 - 23502949 tcatgcagtaaaaattgatgaattacagtga i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169827058 31 + 171630274 cagggcagtaacaatccgtgaattgtagTGA i calJac3.chr4 C 0 I 1342 s cebCap1.NW_016107695v1 1202320 31 - 2164891 aagtgcagtaaaaatcagtgaattacagtga i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1448945 31 - 1813869 cagtgcagtaacaatccgtgaattacagtga i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10916428 25 - 12073884 ------AGTCAATCTTaatgggttccagcta i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56135880 31 + 122678785 tgaggcaatgaacattaatgagtcccagctc i canFam3.chr1 C 0 C 0 e saiBol1.JH378287 1251282 0 - 2905041 C e dasNov3.JH569188 489189 2516 + 760995 I e nomLeu3.chr3 156251705 0 + 157873769 C a score=915490.000000 s hg38.chr6_KB021644v2_alt 23170 124 + 185823 cccagagcaacatgaatgaatctgtgggatataatgtttagtcaaaagcaaattgcca----acaattacactataattatgcagcataactccattcacatgcaatttaaaaatataaaacaccaag s panTro5.chr6 173491443 124 + 175400573 cccagagcaacatgaatgaatctgtgggatataatgtttagtcaaaagctaattgcca----acaattacactataattatgcagcataactccattcacatgcaatttaaaaatataaaacaccaag i panTro5.chr6 C 0 C 0 s panPan2.chr6 171741496 124 + 173848474 cccagagcaacatgaatgaatctgtgggatataatgtttagtcaaaagcaaattgcca----acaattacactataattatgcagcataactccattcacatgcaatttaaaaatataaaacaccaag i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11426615 124 - 12463322 cccagagcaacatgaatgaatctgtgggatataatgtttagtcaaaagcaaattgcca----acaattacactataattatgcagcataactccatttacatgcaatttaaaaatataaaacaccaag i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170278829 124 + 172585720 cccagagcaacatgaatgaatctgtgggacataatgtttagtcaaaagcaaattgcca----acaattacattgtaattacgcagtatgagtccatttacatgcaatttaaaaatataaaacaccaaa i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169024438 124 - 170955103 cccagagcaacatgaatgaatctgtgggacataatgtttagtcaaaagcaaattgcca----acaattacattgtaattacgcagtatgagtccatttacatgcaatttaaaaatataaaacaccaaa i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8311677 124 + 10161646 cccagagcaacatgaatgaatctgtgggacataatgtttagtcaaaagcaaattgcca----acaattacattgtaattacgcagtatgagtccatttacatgcaatttaaaaatataaaacaccaaa i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1341234 124 + 3144229 cccagagcaacatgaatgaatctgtgggatataatgttcagtcaaaagcaaattgcca----acaattacattgtaattatgcagtacgagtccatttacatgcaatttaaaaatataaaacaccaaa i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96620513 124 + 98384682 cccagagcaacatgaatgaatctatgggatataatgttcagtcaaaagcaaattgcca----acaattacattgtaattatgcagtacaagtccatttacatgcaatttaaaaatataaaacatcaaa i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8163265 124 - 10857215 cccagagcaacatgaatgaatctgtgggatataatgttcagtcaaaagcaaattgcca----acaattacattgtaattatgcagtacgagtccatttacatgcaatttaaaaatataaaacaccaaa i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15559256 124 - 23502949 cccagagcaacatgaatgcatctgtgggacataatgtttagtcaaaagcaaattgcca----acaattacgtaataattatgccgtatgagtccatttacatgcaatttaaaaatataaaacaccaaa i colAng1.NW_012114488v1 C 0 C 0 s cebCap1.NW_016107695v1 1202351 123 - 2164891 -ccagagcagcatgagtgaatctgtggaatacactgttcaatcaaaagcaaattgcca----acaactacattacaattatgcagtatgactccgtttacatacaatttaaaaacataaaataccaaa i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1448976 123 - 1813869 -ccagagcagcatgagtgaatctgtggaataccgtgtttaatcaaaagcaaattgcca----acaattacattacagttatgcagtatgactccgtttacatacaatttaaaaatataaaataccaaa i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10916453 127 - 12073884 cactgagcagcacagatgaatcc-tagaacacaatgtttagttaaaagcaagtcgacaaagcataattacattataattatacagcatgattacatttatacaaaatttaaaagcatgaaacatctaa i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56135911 116 + 122678785 tacaaaaccacaccgaggaatcc-tgggatgtgacattcagtcaaaagcgagttgtcaa---acccttcca--------acacagtgctgctctgggtatattaaacttaaaaacacgatacaccggg i canFam3.chr1 C 0 I 2466 e saiBol1.JH378287 1251282 0 - 2905041 C e calJac3.chr4 169827089 1342 + 171630274 I e dasNov3.JH569188 489189 2516 + 760995 I e nomLeu3.chr3 156251705 0 + 157873769 C a score=2240715.000000 s hg38.chr6_KB021644v2_alt 23294 330 + 185823 tcatacattACTAATAATAAGTGGTGCCAatcataatccctaaagacaaaatcctgaatgccataatcccaaatgttgaaatcttgaaagattaaaattcctaaagtc---------------taaattctaaaagtctaaaatccctaacatctaattgaatctccaaatcataatgacagatttgaaattaggtgtgatcaaagcctttaaaagcaaattttaaggggtgaccaataaagtttgttttttatgttcagtccagtgcattgggctggaaagccagctgagtggat--tggccacatgatacggcaatga-ggaaacttcactttaaaaatgcgtcat s panTro5.chr6 173491567 324 + 175400573 tcatacattACTAATAATAAGTGGTGCCAatcataatccctaaagacaaaatcctgaatgccataatcccaaatgttgaaatcttgaaagattaaaattcctaaagtc---------------taaattctaaaagtctaaaatccctaacatctaattgaatctccaaatcataatgacagatttgaaattaggtgtgatcgaagcctttaaaagtaaattttaaggggcgaccaataaagtttgttttttgcgttcagtccagtgcattgggctggaaagccagctgagtggat--tggccacgtgatatggcaatga-ggaaacttcactttaaaaatg------ i panTro5.chr6 C 0 C 0 s panPan2.chr6 171741620 324 + 173848474 tcatacattACTAATAATAAGTGGTGCCAatcataatccctaaagacaaaatcctgaatgccataatcccaaatgttgaaatcttgaaagattaaaattcctaaagtc---------------taaattctaaaagtctaaaatccctaacatctaattgaatctccaaatcataatgacagatttgaaattaggtgtgatcgaagcctttaaaagtaaattttaaggggtgaccaataaagtttgttttttgcattcagtccagtgcattgggctggaaagccagctgagtggat--tggccacgtgatatggcaatga-ggaaacttcactttaaaaatg------ i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11426739 345 - 12463322 tcatacattACTAATGATAAGTGGTGCCAatcataatccctaaagacaaaatcctgaatgccataatcccaaatgttgaaatcttgaaagattaaaattcctaaagtctaaattctaaaagtgtaaattctaaaagtctaaaatccctaacatctaattgaatctccaaatcataatgacagatttgaaattaggtgtgatcaaagcctttaaaagtaaattttaaggggtgaccaataaagtttgttttttacgttcagtccagtgcattgggctggaaagccagctgagtggat--tggccacgtgatatggcaatga-ggaaacttcactttaaaaatgcgtcat i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170278953 329 + 172585720 tcatacattACTAATAATAAGTGGTGCCAatcgtaatccctaaagacaaaatcctgaatgccataacc-caaatgttgaaatcttgaaagattaaaattcctaaagtc---------------taaattctaaaagtggaaaatccctaacatttgattgaatctccaaatcataatgacagattggaaattaggtgtgatcaagacctttaaaagtaaattttaaggagtgaccaataaagtttgttttttatgttcagtccagtgcattgggctggaaagtcaactgagtggat--tggccacgtgatatggcaatga-ggaaacttcactttaaaaatgtgtcat i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169024562 329 - 170955103 tcatacattACTAATAATAAGTGGTGCCAatcgtaatccctaaagacaaaatcctgaatgccataacc-caaatgttgaaatcttgaaagattaaaattcctaaagtc---------------taaattctaaaagtggaaaatccctaacatttgattgaatctccaaatcataatgacagattggaaattaggtgtgatcaagacctttaaaagtaaattttaaggagtgaccaataaagtttgttttttatgttcagtccagtgcattgggctggaaagtcaactgagtggat--tggccacgtgatatggcaatga-ggaaacttcactttaaaaatatgtcat i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8311801 329 + 10161646 tcatacattACTAATAATAAGTGGTGCCAatcgtaatccctaaagacaaaatcctgaatgccataacc-caaatgttgaaatcttgaaagattaaaattcctaaagtc---------------taaattctaaaagtggaaaatccctaacatttgattgaatctctaaatcataatgacagattggaaattaggtgtgatcaagacctttaaaagtaaattttaaggagtgaccaataaagtttgtttttcatgttcagtccagtgcattgggctggaaagtcaactgagtggat--tggccacgtgatatggcaatga-ggaaacttcactttaaaaatatgtcat i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1341358 329 + 3144229 tcatacattACTAATAATAAGTGGTGCCgatcataatccctaaaggcaaaatcctgaatgccataacc-caaatgttgaaatcttgaaagattaaaattcctaaagtc---------------taaattctaaaagtggaaaatccctaacatttgattgaatctccaaatcataatgacagatttgaaattaggtgtgatcaagacctttaaaagtaaattttaaggagtgaccaataaagtttgttttttatgttcagtccagtgcattgggctggaaagtcaactgagtggat--tggccacgtgatatggcaatga-ggaaacttcactataaaaatgtgtcat i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96620637 330 + 98384682 tcatacattACTAATAATAAGTGGTGCCggtcataatccctaaagacaaaatcctgaatgccataacctcaaatgttggaatcttgaaagattaaaattcctaaagtc---------------taaattctaaaagtcgaaaatccctaacatctgattgaatctccaaatcataatgacagatttgaaattaggtgtgatcaagacctttaaaagtacattttaaggaatgaccaataaggtttgttttttacattcagtccagtgcattgggctggaaagccagttgagtggat--tggccacgtgatacggcactga-ggaaacttcactttaaaaatgggtgat i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8163389 329 - 10857215 tcatacattACTAATAATAAGTGGTGCCgatcataatccctaaagacaaaatcctgaatgccataacc-caaatgttgaaatcttgaaagattaaaattcctaaagtc---------------taaattctaaaagtggaaaatccctaacatttgattgaatctccaaatcataatgacagatttgaaattaggtgtgatcaagacctttaaaagtaaattttaaggagtgaccaataaagtttgttttttatgttcagtccagtgcattgggctggaaagtcaactgagtggat--tggccacgtgatatggcaatga-ggaaacttcactataaaaatgtgtcat i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15559380 330 - 23502949 tcatacattACTAATAATAAGTGGTGCCgatcataatccctaaagacaaaatcctgaatgccataacctcaaatgttgaaatcttgaaagattaaaattcctaaagtc---------------taaattctaaaagtcgaaaatccctaacatctgattgaatctccaaatcataatgacagatttgaaattaggtgtgatcaagacctttaaaagtaagttttaaggagtgaccaataaagtttgttttttatgttcagtccagtgcattgggctggaaagccagctgagtggat--tggccacgtgatatggcaatga-ggaaacttcactttaaaaatgtgtgat i colAng1.NW_012114488v1 C 0 C 0 s cebCap1.NW_016107695v1 1202474 326 - 2164891 gcatacattAC---TAACAAATGGTGCTgatcataatccctatagac-aaatcctgactcccataatccttgatgttgaaattctgaaagaccaaaattcctaaggtc---------------taaattctaaaagtctaaaatccctgacatctgattgaatctccaaatcgtaaggacagatttgaaattaggtgtgatcaagacttctaaaagtgaattttaaggggcagccgatacaatttgttttttatgttcagtccagcgcactgggctggaaaggcagattcgtggat--aggccacatgatacggcaatga-tgaagcttcgcattaaaaacacgtcat i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1449099 330 - 1813869 tcgtacattACTAATAATAAAgggtgctgatcataatccctaaagacaaaatcctgactgccacaatcctcaatgttgaaatctcgaaagatcaaaattcctaaagtc---------------taaattctaaaagtctaaaatccctgacatccggttgaatctccaaatcataatgacagatttgaaattaggcgtgatcaagacttctaaaagtgaattttaaggtgtgaccgataaaatttattttttacgttcagtccagcgcactgggctggaaacccagattagtggat--aggccacatgatacggcagtga-tgaagcttcgcgttaaaaacacgtcat i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10916580 312 - 12073884 tgatatattattgataacacgtggtaCTgaccgtaatcctgaaacacaaaattctgaaggccataatt-tgaatgttgaaatttggagtgatcaaaatccccaaaatc---------------taaatcttgcaagtctaaaatctctaacatctaaCTGAGTTTC-AGGTCCCagtgatgtatttagtatttggtgcaaccaaggcttccaaaagtggctttcaaggtgtcgc------accttgttttttccattcagccca-------------gaaatttagatatgtggattctgagcacgtgacatggcgctggcaaaaactccagtgcaaggatgtgtcat i otoGar3.GL873575 C 0 C 0 e saiBol1.JH378287 1251282 0 - 2905041 C e calJac3.chr4 169827089 1342 + 171630274 I e dasNov3.JH569188 489189 2516 + 760995 I e canFam3.chr1 56136027 2466 + 122678785 I e nomLeu3.chr3 156251705 0 + 157873769 C a score=83562.000000 s hg38.chr6_KB021644v2_alt 23624 30 + 185823 ttgcctgcgttggcattccttccagccagt s gorGor5.CYUI01015032v1 11427084 30 - 12463322 ttgcctgcattggcattccttccagcCAGT i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170279282 30 + 172585720 ttgcctgcattggcatttcttccagcCAGT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169024891 30 - 170955103 ttgcctgcattggcatttcttccagcCAGT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8312130 30 + 10161646 ttgcctgcattggcatttcttccagcCAGT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1341687 30 + 3144229 ttgcctgcattggcatttcttccagcCAGT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96620967 9 + 98384682 ttgcctgca--------------------- i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8163718 30 - 10857215 ttgcctgcattggcatttcttccagcCAGT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15559710 9 - 23502949 ttgtctgca--------------------- i colAng1.NW_012114488v1 C 0 C 0 s cebCap1.NW_016107695v1 1202800 30 - 2164891 ctgccagcaccgccgttccttccagccagt i cebCap1.NW_016107695v1 C 0 I 562 s aotNan1.NW_018494782v1 1449429 30 - 1813869 ctgcctgcattggtgatccttccagccagt i aotNan1.NW_018494782v1 C 0 I 868 e otoGar3.GL873575 10916892 0 - 12073884 C e saiBol1.JH378287 1251282 0 - 2905041 C e calJac3.chr4 169827089 1342 + 171630274 I e dasNov3.JH569188 489189 2516 + 760995 I e canFam3.chr1 56136027 2466 + 122678785 I e nomLeu3.chr3 156251705 0 + 157873769 C e panPan2.chr6 171741944 0 + 173848474 C e panTro5.chr6 173491891 0 + 175400573 C a score=123581.000000 s hg38.chr6_KB021644v2_alt 23654 37 + 185823 cgtcatttgcctgca------------------------------------------------------------------------ttggcgttccttccagccagtc s panTro5.chr6 173491891 37 + 175400573 cgtcatttgcctgca------------------------------------------------------------------------ttggcgttccttccagccagtc i panTro5.chr6 C 0 C 0 s panPan2.chr6 171741944 37 + 173848474 cgtcatttgcctgca------------------------------------------------------------------------ttggcgttccttccagccagtc i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11427114 37 - 12463322 cgtcatttgcctgca------------------------------------------------------------------------ttggcgttccttccagcCAGTC i gorGor5.CYUI01015032v1 C 0 I 107 s rheMac8.chr4 170279312 37 + 172585720 CGTCATTTGCCTGAG------------------------------------------------------------------------TTGGCGTTCCTTCCAGCCAGTC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169024921 37 - 170955103 CGTCATTTGCCTGAG------------------------------------------------------------------------TTGGCGTTCCTTCCAGCCAGTC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8312160 37 + 10161646 CGTCATTTGCCTGAG------------------------------------------------------------------------TTGGCGTTCCTTCCAGCCAGTC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1341717 37 + 3144229 CGTCATTTGCCTGAG------------------------------------------------------------------------TTGGCGTTCCTTCCAGCCAGTC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96620976 22 + 98384682 ---------------------------------------------------------------------------------------ttggggttccttccagccagtc i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8163748 109 - 10857215 CGTCATTTGCCTGAGTTGGCGTTCCTTCCAGCCAGTCATCATTTGCCTGAGTTGGCATTCCTTCCAGCCAGTCATCACTTACCTGCGTTGGTGTTCCTTCCAGCCAGTc i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15559719 22 - 23502949 ---------------------------------------------------------------------------------------ttggggttccttccagccagtc i colAng1.NW_012114488v1 C 0 C 0 e otoGar3.GL873575 10916892 0 - 12073884 C e saiBol1.JH378287 1251282 0 - 2905041 C e aotNan1.NW_018494782v1 1449459 868 - 1813869 I e cebCap1.NW_016107695v1 1202830 562 - 2164891 I e calJac3.chr4 169827089 1342 + 171630274 I e dasNov3.JH569188 489189 2516 + 760995 I e canFam3.chr1 56136027 2466 + 122678785 I e nomLeu3.chr3 156251705 0 + 157873769 C a score=101257.000000 s hg38.chr6_KB021644v2_alt 23691 56 + 185823 g------------------------------------------------------------------------tcatttgcctgcattggcgttccttccagccagtcatcat-------------------------------------------------------ttgcctgcattggcg s panTro5.chr6 173491928 56 + 175400573 g------------------------------------------------------------------------tcatttgcctgcattggcgttccttccagccagtcgtcat-------------------------------------------------------ttgcctgcattggtg i panTro5.chr6 C 0 C 0 s panPan2.chr6 171741981 56 + 173848474 g------------------------------------------------------------------------tcatttgcctgcattggcgttccttccagccagtcgtcat-------------------------------------------------------ttgcctgcattggtg i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11427258 56 - 12463322 G------------------------------------------------------------------------TCATTTGCCTGCATTGGCGTTCCTTCCAGCCAGTTgtcat-------------------------------------------------------ttgcctgcattggcg i gorGor5.CYUI01015032v1 I 107 C 0 s rheMac8.chr4 170279349 92 + 172585720 A------------------------------------------------------------------------TCATTTGCCTGCATTGGCGTTCATTCCAGCCAGTCGTCAGTTACCTGTGTT------GGCGTTCCTTCCAGCCAGTcatcat-------------ttacccgtgttggcg i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169024958 92 - 170955103 A------------------------------------------------------------------------TCATTTGCCTGCATTGGCGTTCATTCCAGCCAGTCGTCATTTAC------CTGTGTTGGCGTTCCTTCCAGCCAGTcatcat-------------ttacccgtgttggcg i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8312197 92 + 10161646 A------------------------------------------------------------------------TCATTTGCCTGCATTGGCGTTCATTCCAGCCAGTCGTCATTTAC------------CTGCGTT-------GGCGTTCCTTCCAGCCAGTcatcatttacccgtgttggcg i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1341754 128 + 3144229 ATCATTTGCCTGAGTTGGCATTCCTTCCAGCCAGTCATCACTTACCTGCGTTGGTGTTCCTTCCAGCCAGTcgtcatttacctgcattggcattccttccagcCAGTcgtcat-------------------------------------------------------ttacctgcgtgggcg i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96620998 34 + 98384682 g------------------------------------------------------------------------tcatttgcctgcgttggcattccttccagccag----------------------------------------------------------------------------- i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8163857 56 - 10857215 g------------------------------------------------------------------------tcatttacctgcattggcattccttccagcCAGTcgtcat-------------------------------------------------------ttacctgcgtgggcg i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15559741 20 - 23502949 a------------------------------------------------------------------------------------------------------------tcat-------------------------------------------------------ttgcctgcgtgggcg i colAng1.NW_012114488v1 C 0 C 0 e otoGar3.GL873575 10916892 0 - 12073884 C e saiBol1.JH378287 1251282 0 - 2905041 C e aotNan1.NW_018494782v1 1449459 868 - 1813869 I e cebCap1.NW_016107695v1 1202830 562 - 2164891 I e calJac3.chr4 169827089 1342 + 171630274 I e dasNov3.JH569188 489189 2516 + 760995 I e canFam3.chr1 56136027 2466 + 122678785 I e nomLeu3.chr3 156251705 0 + 157873769 C a score=2832934.000000 s hg38.chr6_KB021644v2_alt 23747 582 + 185823 ttctttccagccaatgacactccaggagctcttcatgaattaaagccacatttgcctgcagaagccagtgaagttaccaactggctcaaaaataatcatattcagggtagggtgagaggatgctta-cataatgatgctgctgtttgatcaatagcattgtttccaccaaatctgcggcctgtagatga-gtgcaggcatcatggatgtccaggtatccaaagcaatgtaaaagcatgggacagaaga---tgggaaaatttaataggggattttcatgtcagtgaacgtcgaatcata---ggatttcaaaaagagcagtgccacataga-aaatgaatgtgaacatattctccaaggagagccatgtcctaaaagcaaaaagcagccactcattgagatgcaagacttcaaaacacagctcatggccctgaaagtcagccagatctaatgggttgtctccatgcaattgcccattgcccattcctgtcatatgctttttcatgtgt--caatttatttttagtttttccgtttttgtttctatgtttagt---tttcttttcccactctctttggttgtctgcattatttatta s panTro5.chr6 173491984 582 + 175400573 ttctttccagccaatgacactccaggagctcttcatgaattaaagccacatttgcctgcagaagccagtgaagttaccaactggctcaaaaataatcatattcagggtagggtgagaggatgctta-cataatgatgccgctgtttgatcaatagtattgtttccaccaaatctgcggcctgtagatga-gtgcaggcatcatggatgtccaggtatccaaagcaatgtaaaagcatgggacagaaga---tgggaaaatttaataggggattttcatgtcagtgaatgttgaatcata---ggatttcaaaaagagcagtgccacataga-aaatgaatgtgaacatattctccaaggagagacatgtcctaaaagcaaaaagcagccactcattgagatgcaagatttcaaaacacagctcatggccctgaaagtcagccagatctaatgggttgtctccatgcaattgcccattgcccattcctgtcatatgctttttcatgtgt--caatttatttttagtttttccgtttttgtttctatgtttagt---tttcttttcccactctctttggttgtctgcattatttatta i panTro5.chr6 C 0 C 0 s panPan2.chr6 171742037 582 + 173848474 ttctttccagccaatgacactccaggagctcttcatgaattaaagccacatttgcctgcagaagccagtgaagttaccaactggctcaaaaataatcatattcagggtagggtgagaggatgctta-cataatgatgccgctgtttgatcaatagtattgtttccaccaaatctgcggcctgtagatga-gtgcaggcatcatggatgtccaggtatccaaagcaatgtaaaagcatgggacagaaga---tgggaaaatttaataggggattttcatgtcagtgaacgttgaatcata---ggatttcaaaaagagcagtgccacataga-aaatgaatgtgaacatattctccaaggagagacatgtcctaaaagcaaaaagcagccactcattgagatgcaagatttcaaaacacagctcatggccctgaaagtcagccagatctaatgggttgtctccatgcaattgcccattgcccattcctgtcatatgctttttcatgtgt--caatttatttttagtttttccgtttttgtttctatgtttagt---tttcttttcccactctcttttgttgtctgcattatttatta i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11427314 582 - 12463322 ttctttctagccaatgacactccaggagctcttcatgaattaaagccacatttgcctgcagaagccagtgaagttaccaactggctcaaaaataatcatattcagggtagggtgagaggatgctta--ataatgatgctgctgtttgatcaatagttttgtttccaccaaatctgcagcctgtagatgaggtgcaggcaccatggatgtccaggtatccaaagcaatgtaaaagcatgggacagaaga---tgggaaaatttaataggggattttcatgtcagtgaacgtcgaatcata---ggatttcaaaaagagcagtgccacataga-aaacgaatgtgaacatattctccaaggagagccatgttctaaaagcaaaaagcagccactcattgcgatgcaagacttcaaaacacagctcatgaccctgaaagtcagccagatctaatgggttgtctccatgcaattgcccattgcccattcctgtcatatgctttttcatatgt--caatttatttttagtttttccgtttttgtttctatatttagt---tttcttttcccactctctttggttgtctgcattatttatta i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170279441 580 + 172585720 ttccttccggccaatgacactccaggagctcttcatgaattaaagccacgtttgcctgcagaagccagtgaagttgccaactggctcaaaaacaatcatgttcagggtagggtgagaagatgctta-cacaacgctgctgctgttctgtcagcagtattgtttccaccaaatctgcggcctgttgatga-gtgcaggcatcatggatgtccaggtatccaaagcaacgtaaaagcatgggacagaaga---tgggaaaatgtaataggggattttcatgtcagtgcacgttgaatcaca---ggatttcaaaaagagcagcagcacaaaga-aaatgaatgtgaacgtattcttcaaggagagccatgtcctaaaagcaaaaagcagccactcattgcgatgcaagacttcaaaataccgttcatggccctgaaagtcagccagatctaatgggctatctccatgcaattgcccattgcccattcctgtcatatgcattttcgtatgt--caatttatttttagtttttccattgt--tttctatgtttagt---tttcttttcccactatctttggttgtcagcattatttatta i rheMac8.chr4 C 0 I 10 s macFas5.chr4 169025050 580 - 170955103 ttccttccggccaatgacactccaggagctcttcatgaattaaagccacgtttgcctgcagaagccagtgaagttgccaactggctcaaaaacaatcatgttcagggtagggtgagaagatgctta-cacaacggtgctgctgttctgtcagcagtattgtttccaccaaatctgcggcctgttgatga-gtgcaggcatcatggatgtccaggtatccaaagcaacgtaaaagcatgggacagaaga---tgggaaaatgtaataggggattttcatgtcagtgcacgttgaatcaca---ggatttcaaaaagagcagcagcacaaaga-aaatgaatgtgaacgtattcttcaaggagagccatgtcctaaaagcaaaaagcagccactcattgcgatgcaagacttcaaaataccgttcatggccctgaaagtcagccagatctaatgggctatctccatgcaattgcccattgcccattcctgtcatatgcattttcgtatgt--caatttatttttagtttttccattgt--tttctatgtttagt---tttcttttcccactatctttggttgtcagcattatttatta i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8312289 580 + 10161646 ttccttccggccactgacactccaggagctcttcatgaattaaagccacgtttgcctgcagaagccagtgaagttgccaactggctcaaaaacaatcatgttcagggtagggtgagaagatgctta-cacaacggtgctgctgttctgtcagcagtattgtttccaccaaatctgcggcctgttgatga-gtgcaggcatcatggatgtccaggtatccaaagcaacgtaaaagcatgggacagaaga---tgggaaaatgtaataggggattttcatgtcagtgcacgttgaatcaca---ggatttcaaaaagagcagcagcacaaaga-aaattaatgtgaacgtattcttcaaggagagccatgtcctaaaagcaaaaagcagccactcattgcgatgcaagacttcaaaataccgttcatggcgctgaaagtcagccagatctaatgggctatctccatgcaattgcccattgcccattcctgtcacatgcattttcatatgt--caatttatttttagtttttccattgt--tttctatgtttagt---tttcttttcccactatctttggttgtcagcattatttatta i macNem1.NW_012011000v1 C 0 I 10 s cerAty1.NW_012002071v1 1341882 579 + 3144229 ttccttccagccaatgacactccaggagctcttcatgaattaaagccacgtttgcctgcagaagccagtgaagttaccaactggctcaaaaacaatcatgttcagggtagggtgagaagttgctta-cacaacggtgctgctgttctgtcagcagtattgtttccaccaaatctgcggcctgttgatga-gtgcaggcatcatggatgtccaggtatccaaagcaacgtaaaagcatgggacag-aga---tgggaaaatgtaataggggattttcatgtcagtgcacactgaatcaca---ggatttcaaaaagagcagcaccacataga-aaatgaatgtgaacgtattcttcaaggacagccatgtcctaaaagcaaaaagcagccactcattgcgatgcaagacttcaaaatacagttcatggccctgaaagtcagccagatctaacgggttgtctccatgcaattgcccattgcccgttcctgtgatatgcgtttttgtatgt--caatttatttttagtttttccattgt--tttctatgtttagt---tttcttttcccactatctttggttgtcagcgttatttatta i cerAty1.NW_012002071v1 C 0 I 10 s chlSab2.chr13 96621032 566 + 98384682 --------------tgacactccaggagctcttcatgaattaaagccacatttgcctgcagaagccagtgaagttaccaactggctcaaaaacaatcatgttcagggtaggataagaagatgctta-cacaacggtgctgctgttctatcagcagtattgtttccaccaaatctgcggcctgttgatga-gtgcaggcatcatggatgtccaggtatccaaagcaacgtaaaagcatgggacagaaga---tgggaaaatgtaataggggattttcatgtcagtgcacgttgaatcaca---ggatttcaaaaagagcagcaccacgtaga-aaatgaatgtgaacgtattcttcaaggacagccatgtcctaaaagcaaaaagcagccactcattgcgatgtaagacttcaaaatacagttcatggccctgaaagtcagccagatctaacgcgttgtctccatgcaattgcccattgcccgttcctgtgatatgcatttttgtatgt--caatttatttttagtttttccatttt--tttctatgtttagt---ttccttttcccactatctttggttgtcagcgttatttatta i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8163913 579 - 10857215 ttccttccagccaatgacactccaggagctcttcatgaattaaagccacgtttgcctgcagaagccagtgaagttgccaactggctcaaaaacaatcatgttcagggtagggtgagaagatgctta-cacaatggtgctgctgttctgtcagcagtattgtttccaccaaatctgcggcctgttgatga-gtgcaggcatcatggatgtccaggtatccaaagcaacgtaaaagcatgggacag-aga---tgggaaaatgtaataggggattttcatgtcagtgcacgccgaatcaca---ggatttcaaaaagagcagcaccacatgga-aaatgaatgtgaacgtattcttcaaggacagccatgtcctaaaagcaaaaagcagccactcattgcgatgcaagacttcaaaatacagttcatggccctgaaagtcagccagatctaatgggttgtctccatgcaattgcccattgcccgttcctgtgatatgcgttttcgtatgt--caatttatttttagtttttccattgt--tttctatgtttagt---tttcttttcccactatctttggttgtcagcattatttatta i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15559761 580 - 23502949 ttccttccagccaatgacactccaggagttcttcatgaattaaagccacagttgcctgcagaagccagtgaagttaccagctggctcaaaaataatcatgttcagggtagggtgagaagatgctta-cacaacggtgctgctgttctatccgtagtattgtttccactaaatctgcggcctgttgatga-gtgcaggcatcatggatgtccaggtatccaaagcaacgtaaaagcatgggacagaaga---tgggaaaatttaataggggattttcatgtcagtgcacgttgaatcaca---ggatttcaaaaagagcagcaccacataga-aaatgaatgtgaacgtattctttaaggagagccatgtgctaaaagcaaaaagcagccactcattgcgatgcaagacttcaaaatacagttcatggccctgaaagtcagccagatctagtgcactgtctccatgcaattgcccattgcccattcctgtcatatgcgttttcgtatgt--caatttatttttagtttttccatttt--tttctatgtttagt---tttcttttcccactatctttggttgtcagcattatttgtta i colAng1.NW_012114488v1 C 0 C 0 s otoGar3.GL873575 10916892 533 - 12073884 ttctatc---ctaatgaagtctcaggagcttttaatgaatttaagccttgtttgcct---gaagccagtgaactcattgaccagatcaaaaacgactacatgctgggtaggatgaggagacgcgtggcagagcggc-ctg--gtctgatcaccagggctgctcctgccaaatctgcggtcctggtagga-gcgtgtgcaggatggattt----------------atgtgtggaaatgacacagaagctcttggggacgcttactgagaaacactcacgttgatgtacacggaatcacagaggaatttc--acagagcagcaccgtgtaggcacaggcacgtgcctgtgttccctggagacagccgcgtcctggagaaaaaaCGCAGCTGTTGCTCATGATGCAGAACTTGAGAGCA----TCGTGACCCTGAGAGGCG--CAGCGCC---------------tgcaggtg-ctgtagtctagctctgtgatgcactttctcatgtactgtattttctttttagttttagc-------tttggaggttcattacgtgtcttttttttctgtc-----ttatca-cattatttttca i otoGar3.GL873575 C 0 C 0 e saiBol1.JH378287 1251282 0 - 2905041 C e aotNan1.NW_018494782v1 1449459 868 - 1813869 I e cebCap1.NW_016107695v1 1202830 562 - 2164891 I e calJac3.chr4 169827089 1342 + 171630274 I e dasNov3.JH569188 489189 2516 + 760995 I e canFam3.chr1 56136027 2466 + 122678785 I e nomLeu3.chr3 156251705 0 + 157873769 C a score=15738.000000 s hg38.chr6_KB021644v2_alt 24329 7 + 185823 gaattta s panTro5.chr6 173492566 7 + 175400573 gaattta i panTro5.chr6 C 0 C 0 s panPan2.chr6 171742619 7 + 173848474 gaattta i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11427896 7 - 12463322 gaattta i gorGor5.CYUI01015032v1 C 0 C 0 s macFas5.chr4 169025630 7 - 170955103 tcattta i macFas5.chr4 C 0 C 0 s chlSab2.chr13 96621598 7 + 98384682 taattta i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8164492 7 - 10857215 taattta i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15560341 7 - 23502949 taattta i colAng1.NW_012114488v1 C 0 C 0 s otoGar3.GL873575 10917425 7 - 12073884 caattca i otoGar3.GL873575 C 0 C 0 e saiBol1.JH378287 1251282 0 - 2905041 C e aotNan1.NW_018494782v1 1449459 868 - 1813869 I e cebCap1.NW_016107695v1 1202830 562 - 2164891 I e calJac3.chr4 169827089 1342 + 171630274 I e dasNov3.JH569188 489189 2516 + 760995 I e canFam3.chr1 56136027 2466 + 122678785 I e cerAty1.NW_012002071v1 1342461 10 + 3144229 I e nomLeu3.chr3 156251705 0 + 157873769 C e macNem1.NW_012011000v1 8312869 10 + 10161646 I e rheMac8.chr4 170280021 10 + 172585720 I a score=5348.000000 s hg38.chr6_KB021644v2_alt 24336 2 + 185823 ct s panTro5.chr6 173492573 2 + 175400573 ct i panTro5.chr6 C 0 C 0 s panPan2.chr6 171742626 2 + 173848474 ct i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11427903 2 - 12463322 ct i gorGor5.CYUI01015032v1 C 0 C 0 s chlSab2.chr13 96621605 2 + 98384682 ct i chlSab2.chr13 C 0 I 1 s manLeu1.NW_012106474v1 8164499 2 - 10857215 ct i manLeu1.NW_012106474v1 C 0 I 1 s colAng1.NW_012114488v1 15560348 2 - 23502949 ct i colAng1.NW_012114488v1 C 0 I 1 s otoGar3.GL873575 10917432 2 - 12073884 ct i otoGar3.GL873575 C 0 C 0 e saiBol1.JH378287 1251282 0 - 2905041 C e aotNan1.NW_018494782v1 1449459 868 - 1813869 I e cebCap1.NW_016107695v1 1202830 562 - 2164891 I e calJac3.chr4 169827089 1342 + 171630274 I e dasNov3.JH569188 489189 2516 + 760995 I e canFam3.chr1 56136027 2466 + 122678785 I e cerAty1.NW_012002071v1 1342461 10 + 3144229 I e nomLeu3.chr3 156251705 0 + 157873769 C e macNem1.NW_012011000v1 8312869 10 + 10161646 I e rheMac8.chr4 170280021 10 + 172585720 I e macFas5.chr4 169025637 0 - 170955103 C a score=3007.000000 s hg38.chr6_KB021644v2_alt 24338 4 + 185823 atgc s panTro5.chr6 173492575 4 + 175400573 atgT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171742628 4 + 173848474 atgT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11427905 4 - 12463322 atgt i gorGor5.CYUI01015032v1 C 0 C 0 s otoGar3.GL873575 10917434 4 - 12073884 atgc i otoGar3.GL873575 C 0 I 1940 e saiBol1.JH378287 1251282 0 - 2905041 C e aotNan1.NW_018494782v1 1449459 868 - 1813869 I e cebCap1.NW_016107695v1 1202830 562 - 2164891 I e calJac3.chr4 169827089 1342 + 171630274 I e dasNov3.JH569188 489189 2516 + 760995 I e colAng1.NW_012114488v1 15560350 1 - 23502949 I e canFam3.chr1 56136027 2466 + 122678785 I e chlSab2.chr13 96621607 1 + 98384682 I e cerAty1.NW_012002071v1 1342461 10 + 3144229 I e nomLeu3.chr3 156251705 0 + 157873769 C e manLeu1.NW_012106474v1 8164501 1 - 10857215 I e macNem1.NW_012011000v1 8312869 10 + 10161646 I e rheMac8.chr4 170280021 10 + 172585720 I e macFas5.chr4 169025637 0 - 170955103 C a score=166076.000000 s hg38.chr6_KB021644v2_alt 24342 295 + 185823 attgaggctgggcgcggtggctcacgcctgtaatcccagcactttgggaggccgaggcgggtggatcacgaggtcaagagatcgagaccatcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaaaatagctgggcatggtggtggacgcctgtagtcccagctgcttgggaggctgaggcaggagaatggcatgaacctgggaggcagagcttgcaatgagccgagatggcaccactgcactccagcctgggcaacagagcgagactctgtctcaaaaaaaaa s panTro5.chr6 173492579 295 + 175400573 ATTGAggctgggcacggtggctcacgcctgtaatcccagcactttgggaggccgaggtgggtggatcacgaggtcaagagatcgagaccatcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaaaatagctgggcatggtggtggacgcctgtagtcccagctgcttgggaggctgaggcaggagaatggcatgaacctgggaggcggagcttgcagtgagccgagatggcaccactgcactccagcctgggcaacagagcgagactctgtctcaaaaaaaaa i panTro5.chr6 C 0 I 2 s panPan2.chr6 171742632 295 + 173848474 ATTGAggctgggcacggtggctcacgcctgtaatcccagcactttgggaggccgaggtgggtggatcacgaggtcaagagatcgagaccatcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaaaatagctgggcatggtggtggacgcctgtagtcccagctgcttgggaggctgaggcaggagaatggcatgaacctgggaggcggagcttgcagtgagccgagatggcaccactgcactccagcctgggcaacagagcgagactctgtctcaaaaaaaaa i panPan2.chr6 C 0 I 2 s gorGor5.CYUI01015032v1 11427909 295 - 12463322 attgaggctgggcgcagtggctcacgcctgtaatcccagcactttgggaggccgaggcgggtggatcacgaggtcaaaagattgagaccatcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaaaatagctgggcatggtggtggacgcctgtagtcccagctgcctgggaggctgaggcaggagaatggcatgaacctgggaggcggagcttgcagtgagccgagatggcaccactgcactccagcctgggcaacagagcgagactctgtctccaaaaaaaa i gorGor5.CYUI01015032v1 C 0 C 0 e otoGar3.GL873575 10917438 1940 - 12073884 I e saiBol1.JH378287 1251282 0 - 2905041 C e aotNan1.NW_018494782v1 1449459 868 - 1813869 I e cebCap1.NW_016107695v1 1202830 562 - 2164891 I e calJac3.chr4 169827089 1342 + 171630274 I e dasNov3.JH569188 489189 2516 + 760995 I e colAng1.NW_012114488v1 15560350 1 - 23502949 I e canFam3.chr1 56136027 2466 + 122678785 I e chlSab2.chr13 96621607 1 + 98384682 I e cerAty1.NW_012002071v1 1342461 10 + 3144229 I e nomLeu3.chr3 156251705 0 + 157873769 C e manLeu1.NW_012106474v1 8164501 1 - 10857215 I e macNem1.NW_012011000v1 8312869 10 + 10161646 I e rheMac8.chr4 170280021 10 + 172585720 I e macFas5.chr4 169025637 0 - 170955103 C a score=389.000000 s hg38.chr6_KB021644v2_alt 24637 10 + 185823 aaaaaaaaaa s gorGor5.CYUI01015032v1 11428204 9 - 12463322 aaaaaaaaa- i gorGor5.CYUI01015032v1 C 0 C 0 e otoGar3.GL873575 10917438 1940 - 12073884 I e saiBol1.JH378287 1251282 0 - 2905041 C e aotNan1.NW_018494782v1 1449459 868 - 1813869 I e cebCap1.NW_016107695v1 1202830 562 - 2164891 I e calJac3.chr4 169827089 1342 + 171630274 I e dasNov3.JH569188 489189 2516 + 760995 I e colAng1.NW_012114488v1 15560350 1 - 23502949 I e canFam3.chr1 56136027 2466 + 122678785 I e chlSab2.chr13 96621607 1 + 98384682 I e cerAty1.NW_012002071v1 1342461 10 + 3144229 I e nomLeu3.chr3 156251705 0 + 157873769 C e manLeu1.NW_012106474v1 8164501 1 - 10857215 I e macNem1.NW_012011000v1 8312869 10 + 10161646 I e rheMac8.chr4 170280021 10 + 172585720 I e macFas5.chr4 169025637 0 - 170955103 C e panPan2.chr6 171742927 2 + 173848474 I e panTro5.chr6 173492874 2 + 175400573 I a score=6385.000000 s hg38.chr6_KB021644v2_alt 24647 18 + 185823 agaatttactaagtattt s gorGor5.CYUI01015032v1 11428213 17 - 12463322 -gaatttactaagtattt i gorGor5.CYUI01015032v1 C 0 C 0 s calJac3.chr4 169828431 18 + 171630274 agaacgtactgtctattt i calJac3.chr4 I 1342 C 0 s cebCap1.NW_016107695v1 1203392 18 - 2164891 agaacttactatatattt i cebCap1.NW_016107695v1 I 562 C 0 e otoGar3.GL873575 10917438 1940 - 12073884 I e saiBol1.JH378287 1251282 0 - 2905041 C e aotNan1.NW_018494782v1 1449459 868 - 1813869 I e dasNov3.JH569188 489189 2516 + 760995 I e colAng1.NW_012114488v1 15560350 1 - 23502949 I e canFam3.chr1 56136027 2466 + 122678785 I e chlSab2.chr13 96621607 1 + 98384682 I e cerAty1.NW_012002071v1 1342461 10 + 3144229 I e nomLeu3.chr3 156251705 0 + 157873769 C e manLeu1.NW_012106474v1 8164501 1 - 10857215 I e macNem1.NW_012011000v1 8312869 10 + 10161646 I e rheMac8.chr4 170280021 10 + 172585720 I e macFas5.chr4 169025637 0 - 170955103 C e panPan2.chr6 171742927 2 + 173848474 I e panTro5.chr6 173492874 2 + 175400573 I a score=2332.000000 s hg38.chr6_KB021644v2_alt 24665 3 + 185823 ctt s gorGor5.CYUI01015032v1 11428230 3 - 12463322 ctt i gorGor5.CYUI01015032v1 C 0 C 0 s macFas5.chr4 169025637 3 - 170955103 ctc i macFas5.chr4 C 0 C 0 s calJac3.chr4 169828449 3 + 171630274 ctt i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1203410 3 - 2164891 ctt i cebCap1.NW_016107695v1 C 0 C 0 e otoGar3.GL873575 10917438 1940 - 12073884 I e saiBol1.JH378287 1251282 0 - 2905041 C e aotNan1.NW_018494782v1 1449459 868 - 1813869 I e dasNov3.JH569188 489189 2516 + 760995 I e colAng1.NW_012114488v1 15560350 1 - 23502949 I e canFam3.chr1 56136027 2466 + 122678785 I e chlSab2.chr13 96621607 1 + 98384682 I e cerAty1.NW_012002071v1 1342461 10 + 3144229 I e nomLeu3.chr3 156251705 0 + 157873769 C e manLeu1.NW_012106474v1 8164501 1 - 10857215 I e macNem1.NW_012011000v1 8312869 10 + 10161646 I e rheMac8.chr4 170280021 10 + 172585720 I e panPan2.chr6 171742927 2 + 173848474 I e panTro5.chr6 173492874 2 + 175400573 I a score=1297357.000000 s hg38.chr6_KB021644v2_alt 24668 326 + 185823 cttcacatcatttctaatactggaggtataaattgtgtgaagacttctaattcatattatgccg-tttttgcaaatttgactccacaaaactgcattcctgcaacattgacttagtgtacaagcatcgtgctgtatggaaaggtgttgaaacttcctgaataaataaggagatgtcctttgtgtacatctgcatttgtgagagagaaactttctggagatctcagctctttgggcagctgcatgtgagctggtggtgacccgttgctgttctgatctcctcaacacacttgggttgtccctcacggtgttccagatgcccacaaatg s gorGor5.CYUI01015032v1 11428233 326 - 12463322 cttcacatcatttctaatactggaggtataaattgtgtgaagacttctaattcatattatgccg-tttttgcaaatttgactccacaaaactgcattactgcaacattgacttagtgtacaagcattgtgctgtatgggaaggtgttgaaacttcctgaataaataaggagatgtcctttatgtacatctgcatttgtgagagagaaactttctggagatctcagctctttgggcagctgcatgtgagctggtggtgacccgttgcagttctgatctcctcaacacacttgggttgtccctcacagtgttccagatgcccacaggtg i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170280031 321 + 172585720 cttcacatcatttctaatactggaggtatccattgtgtaaagacttctaattcatattatgcta-tttttgcaaatttgactccaaaaaatt-cattactacaacactgacttagtgtgtaaggattgtgctgtatgggaaagcattgaaacttccttcataaataaggaga-gtcctttttgtacatctgcatctgtgacagagaaactttctggagatctcagctctttgggcagctgcatgtgagctggtggtgacccgttgcagttctgat---ctcaacacactcgggttgtccctcatggtgttccagacgcctacaggtg i rheMac8.chr4 I 10 C 0 s macFas5.chr4 169025640 321 - 170955103 cttcacatcatttctaatactggaggtatccattgtgtaaagacttctaattcatattatgcta-tttttgcaaatttgactccaaaaaatt-cattactacaacattgacttagtgtgtaaggattgtgctgtatgggaaagcattgaaacttccttcataaataaggaga-gtcctttttgtacatctgcatctgtgacagagaaactttctggagatctcagctctttgggcagctgcatgtgagctggtggtgacccgttgcagttctgat---ctcaacacactcgggttgtccctcatggtgttccagacgcctacaggtg i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8312879 321 + 10161646 cttcacatcatttctaatactggaggtatccattgtgtaaagacttctaattcatattatgcta-gttttgcaaatttgactccaaaaaatt-cattactacaacattgacttcgtgtgtaaggattgtgctgtatgggaaagcattgaaatttccttcataaataaggaga-gtcctttttgtacatctgcatctgtgacagagaaactttctggagatctcagctctttgggcagctgcatgtgagctggtggtgacccgttgcagttctgat---ctcaacacactcgggttgtccctcatggtgttccagacgcctacaggtg i macNem1.NW_012011000v1 I 10 C 0 s cerAty1.NW_012002071v1 1342471 324 + 3144229 cttcacatcatttctaatactggaggtatccattgtgtaaagacttctaattcatattatgcta-tttttgcaaatttgactccaaaaaatt-cattactacaacattgacttagtgcgtaaggattgtgctgtatgggaaagcgttgaaacttccttcataaataaggata-gtcctttttgtacatctgcatttgtgacagagaaactttctggggatctcagctctttgggcagctgcatgtgagctggtggtgacccgttgcagttctgatctcctcagcacactcgggttgtccctcatggtgttctagacgcccacaggtg i cerAty1.NW_012002071v1 I 10 C 0 s chlSab2.chr13 96621608 325 + 98384682 cttcacatcatttctaatactggaggtatccattgtgtaaagacttctaattcatattatgctattttttgcaaatttgactccaaaaaatt-cattactacaacattgacttagtgtgtaaggattgtgctgtatgggaaagcattgaaacttccttaataaataaggaga-gtcctttttgtacatctgcatttgtgacagagaaactttctggagatctcagctctttgggcatctgcatgtgagctggtggtgacccgttgcagttctgatctcctcaacacactcgggttgtccctcatggtgttccagacgcctacaggtg i chlSab2.chr13 I 1 C 0 s manLeu1.NW_012106474v1 8164502 324 - 10857215 cttcacatcatttctaatactggaggtatccattgtgtaaagacttctaattcatattatgcta-tttttgcaaatttgactccaaaaaatt-cattactacaacattgacttagtgcgtaaggattgtgctgtatgggaaagcgttgaaacttccttcataaataaggata-gtcctttttgtacatctgcatttgtgacagagaaactttctggagatctcagctctttgggcagctgcatgtgagctggtggtgacccgttgcagttctgatctcctcagcacactcgggttgtccctcatggtgttccggacgcccacaggtg i manLeu1.NW_012106474v1 I 1 C 0 s colAng1.NW_012114488v1 15560351 324 - 23502949 cttcacatcatttctaatattggaggtatccattgtgtaaagacttctaattcatattatgcta-tttttgcaaatttgactccaaaaaatt-cattaacacaacactgacttagtgtgtaaggattgtgctgtatgggaaagcattgaaacttccttaataaataaggaga-gtcctttttgtatatctgcatttgtgacagagaaactttctggagatctcagctctttgggcagctgcatgtgagctggtggtgacccgttgcagttctgatctcctcaacacactcgggtcgtccctcacggtgttccagatgcccacaggtg i colAng1.NW_012114488v1 I 1 C 0 s calJac3.chr4 169828452 284 + 171630274 cttcacatca-ctctgataccgcaggtgcaaattg--cggagacttctaattcacagtaggcgg-tgtttgcaaatctgactccacaaaaccgcatgactcccatacagactcagtgtgtgagcattgtgctgcatgggaaag-accgaaatctccttaataaagaaggggacgtcctttatctacatctgcatttgtgagagagaaactttctcgagagctcagctctttgggcggctgca-------------------------gttctgatctcctcagcaccctcgg-------------gcgttccagacgaccacgggcg i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1203413 288 - 2164891 cttcacatcatctctgataccataggtataaattgtttaaaggcttctaattcacagtatgcgg-tttttgcaaatttgactccacaaaatcacattactcccatatagactcagtgtgtaagcattgtgctgcatgggaaagcactgaaatctccttaataaagaaggagatgtcctttttgtacatctgcatttgtgagagagaaactttctcgagatctcagctctttggacagctgca-------------------------GTTCTGATCTCCTCAGCACCCTCGg-------------gcgttccagacaaccacgggtg i cebCap1.NW_016107695v1 C 0 C 0 e otoGar3.GL873575 10917438 1940 - 12073884 I e saiBol1.JH378287 1251282 0 - 2905041 C e aotNan1.NW_018494782v1 1449459 868 - 1813869 I e dasNov3.JH569188 489189 2516 + 760995 I e canFam3.chr1 56136027 2466 + 122678785 I e nomLeu3.chr3 156251705 0 + 157873769 C e panPan2.chr6 171742927 2 + 173848474 I e panTro5.chr6 173492874 2 + 175400573 I a score=714406.000000 s hg38.chr6_KB021644v2_alt 24994 161 + 185823 tagagctgggtgcccacacaatcaccaacctcggcgctatgcatttacacagttcccttttgaccgattcctttatgaacactctttgtctgttcataCACCTGCTCATAGCTGTTTTACCTGTGTATAAGCAATAGTGCGTGA-TATAATTTCAAAGGAAG s gorGor5.CYUI01015032v1 11428559 159 - 12463322 tagagctgggtgcccaca--atcaccagcctcggcgctatgcatttacacagttcccttttgaccgattcctttatgaatactctttgtctgtacatacacctgctcatagctgttttacctgtgtgTAAGCAATAGTGCGTGA-TATAATTTCAAAGGAAG i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170280352 155 + 172585720 tacagctgggtgcccaca--atcactagcctcagcgttatgcatttacacagttctcttttgaccgttt-ctttatgagtacactt----tgttcataagcctgcttatagccgttatacctgtgGATAAGCAACAGTGCATGATTATAATTTCAAAGGGAG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169025961 155 - 170955103 tacagctgggtgcccaca--atcactagcctcagcgttatgcatttacacagttctcttttgaccgttt-ctttatgagtacactt----tgttcatacgcctgcttatagccgttatacctgtgGATAAGCAACAGTGCATGATTATAATTTCAAAGGGAG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8313200 155 + 10161646 tgcagctgggtgcccaca--atcactagcctcagcgttatgcatttacacagttctcttttgaccgttt-ctttgtgagtgcactt----tgttcatacgcctgcttatagccgttatacctgtgGATACGCAACAGTGCATGATTATAATTTCAAAGGGAG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1342795 159 + 3144229 tacagctgggcgcccaca--atcactagcctcagcgttatgcatttacacagttctcttttgaccgttt-ctttatgagtacactttgtctgttcatacgcctgctcatagctgttatacctgtgGATAAGCAACAGTGCATGATTATAATTTCAAAGGGAG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96621933 159 + 98384682 tacagctgggtgcccaca--atcaccagcctcagcgttatgcatttacacagttcccttttgaccgatt-ctttatgagtacactttgtctgttcatacacctgctcatagctgttataccTGTAGATAAGCAACAGTGCATGATTATAATTTCAAAGGACG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8164826 159 - 10857215 tacagctgggcgcccaca--atcactagcctcagcgttatgcatttacacagttctcttttgaccgttt-ctttatgagtacactttgtctgttcatacgcctgctcatagctgttatacctgtgGATAAGCAACAGTGCATGATTATAATTTCAAAGGGAG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15560675 159 - 23502949 tacagctgggtgcccaca--atcaccagcctcagcgttatgcatttacacagttctcttttgaccgatt-ctttatgagtacacttcatctgttcatacgcctgctcatagctgttatacctgtgGATAAGCAACAGTGCATGATTATAATTTCAAAGGGAG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169828736 157 + 171630274 tagagctgggtgcccaca--atcaccaagctcagcgctgtgcgttcactcagttccttt-tgacccatttctttaggaatacactttgtctgttGACACGCCTGCG-GTGACTGTTTCACCTGTGTATAAGCAATGGTCTGTGA-CATAATTTAAAAGGAAG i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1203701 158 - 2164891 tagagctgggtgcccaca--accaccaacctcggcaatgtgtgtt-actcagttcccttatgacccatttctttatgaatacactttgactgttgatacgcctcctcgtaactgtcttacctgcgTATAAGCAATGGTCTGAGA-CATAATTTAAAAGGAAG i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1450327 158 - 1813869 tagagccgggtgcccaca--gtcaccaacctcagcgctgtgcgtttactcagttccctttcgacccatttctttatgaatacactttgtctgttcatacgcctgctcgtaactgttttacctgtgT-TAAGCAATGATCTGTGA-CATAATTTAAAAGGAAG i aotNan1.NW_018494782v1 I 868 C 0 e otoGar3.GL873575 10917438 1940 - 12073884 I e saiBol1.JH378287 1251282 0 - 2905041 C e dasNov3.JH569188 489189 2516 + 760995 I e canFam3.chr1 56136027 2466 + 122678785 I e nomLeu3.chr3 156251705 0 + 157873769 C e panPan2.chr6 171742927 2 + 173848474 I e panTro5.chr6 173492874 2 + 175400573 I a score=325298.000000 s hg38.chr6_KB021644v2_alt 25155 61 + 185823 ACATTTTGAGTAGTGAATACAAGCAGGTTACAGAGAATACGGTGCAGTGAGATTCCATTTG s gorGor5.CYUI01015032v1 11428718 61 - 12463322 ACATTTTGAGTAGTGAATACAAGCAGGTTACAGAGAATACGGTGCAGTGAGATTCCATTTG i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170280507 61 + 172585720 ACATTTTGAGTAGTGAATACAAGCAGGTTACAGAGAATAGGGTGCAGTAAGATTCCATTTG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169026116 61 - 170955103 ACATTTTGAGTAGTGAATACAAGCAGGTTACAGAGAATAGGGTGCAGTAAGATTCCATTTG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8313355 61 + 10161646 ACATTTTGAGTAGTGAATACAAGCAGGTTACAGAGAATAGGGTGCAGTAAGATTCCATTTG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1342954 61 + 3144229 ACATTTTGAGTAGTGAATACAAGCAGGTTACAGAGAATAAGGTGCAGTAAGATTCCATTTG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96622092 61 + 98384682 ACATTTTGAGTAGTGAAATCAAGCAGGTTACAGAGAATCGGGTGCAGTAAGATTCCATTTG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8164985 61 - 10857215 ACATTTTGAGTAGTGAATACAAGCAGGTTACAGAGAATAGGGTGCAGTAAGATTCCATTTG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15560834 61 - 23502949 ACATTTTCAGTAGTGAATCCAAGCAGGTTACAGAGAATAGAGTGCAGTAATATTCCATTTG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169828893 61 + 171630274 ACATTTTGAGCACTGAGTACACACTGGCTTCAGTGGACGGGGTGCAGTCGGATTCCATTTC i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1203859 60 - 2164891 AGATTTTGAGTAGTGAATACACACTGGTTACAGAAAACAGGGTGCAGTCAGATT-CATTTC i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1450485 61 - 1813869 ACATTTTGAGTAGTGAATACACATTGGTTACAGAGAACGGGGTGCAGTCAGATTCCATTTC i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10919378 61 - 12073884 ACACATTTGATAGTGGATAAGAGTGGCTCATAGAGAATGAGGGACAGTGAGAGTCCTTTTT i otoGar3.GL873575 I 1940 C 0 e saiBol1.JH378287 1251282 0 - 2905041 C e dasNov3.JH569188 489189 2516 + 760995 I e canFam3.chr1 56136027 2466 + 122678785 I e nomLeu3.chr3 156251705 0 + 157873769 C e panPan2.chr6 171742927 2 + 173848474 I e panTro5.chr6 173492874 2 + 175400573 I a score=1363576.000000 s hg38.chr6_KB021644v2_alt 25216 250 + 185823 ATATAAAAATGTAAATATATGTACGGAAAGGTTgagaaggagagaaat-gaaacagaaagggagagaaagagagaaacggacagatgaagaccaggataaaggagaaCCGGAGAGGACTGAAAACATAGTTCTATTCCCGGCAGGGTCTCTGGGTGGTGGAATTGAGAAAACAATTGTTTCCGCTAGTTGCTCGTTTTGAAATTAGTAATTCACAGGTTTTTCTCAGTTATCTCCTATTAAAAGTTTTAAT s gorGor5.CYUI01015032v1 11428779 250 - 12463322 ATATAAAAATGTAAATATATGTATGGAAAGGTTGAGAAGGagagaaac-aaaacagaaagggagagaaagagagaaacggacggatgaagaccaggataaaggagaaCCGGAGAGGACTGAAAACATAGTTCTATTCCCGGCAGGGTCTCTGGGTGGTGGAATTAAGAAAACAATTGTTTCTGCTAGTTGCTCATTTTGAAATTAGTAATTCACAGGTTTTTCTCAGTTATCTCCTATTAAAAGTTTTAAT i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170280568 250 + 172585720 ATATAAAAATGTAAATATGTGTATGGAAAGGTTGAGAAGGAGAGAAAT-GAAACAGAAAGAGAGAGAAAGAGAGAAACGGACAGATGAAGACCAGGATAAAGGAGAACTGGAGAGGACTGAAACTATAGTTCTACTCCCAGCAGGGTCTCTGGGTGGTGGAATTGAGAAAACAATTGTCCCCACTAGTTGCTCATTTTGAAATTAGTAATTCACAGATTTTTATCAATTATCTCCTATTAAAAGTTTTCAT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169026177 250 - 170955103 ATATAAAAATGTAAATATGTGTATGGAAAGGTTgagaaggagagaaat-gaaacagaaagagagagaaagagagaaacggacagatgaagaccaggataaaggagaactagagagGACTGAAACTATAGTTCTACTCCCAGCAGGGTCTCTGGGTGGTGGAATTGAGAAAACAATTGTCCCCACTAGTTGCTCATTTTGAAATTAGTAATTCACAGATTTTTATCAATTATCTCCTATTAAAAGTTTTCAT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8313416 250 + 10161646 ATATAAAAATGTAAATATGTGTATGGAAAGGTTGAGAAGGAGAGAAAT-GAAACAGAAAGAGAGAGAAAGAGAGAAACGGACAGATGAAGACCAGGATAAAGGAGAACTGGAGAGGACTGAAACTATAGTTCTACTCCCAGCAGGGTCTCTGGGTGGTGGAATTGAGAAAACAATTGTCCCCACTAGTTGCTCATTTTGAAATTAGTAATTCACAGATTTTTATCAATTATCTCCTATTAAAAGTTTTCAT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1343015 250 + 3144229 ATATAAAAATGTAAATATGTGTATGGAAAGGTTGAGAAGGAGAGAAAT-GAAACAGAAAGGGAGAGAAAGAGAGAAACGGACAGATGAAGACCAGGATAAAGGAGAAGTGGAGAGGACTGAAAATATAGTTCTACTCCCAGCAGGGTCTCTGGGTGGTGGAATTGAGAAAACAATTGTCCCCACTAGTTGCTCATTTTGAAATTAGTAATTCACAGATTTTTGTCAATTATCTCCTATTAAAAGTTTTCAT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96622153 247 + 98384682 ATATAAAAATGTAAATATGTGTATGGAAAGGTTG---AGGagagaaat-gaaacagaaagggagagaaagagagaaacggacagatgaagaccaggataaaggagaGTTGGAGAGGACTGAAAACATAGTTCTACTCCCAGCAGGGTCTCTGGGTAGTGGAATTGAGAAAACAATTGTCCCCACTAGTTGCTCGTTTTGAAATTAGTAATTCACAGATTTTTATCAATTATCTCCTATTAAAAGTTTTAAT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8165046 250 - 10857215 ATATAAAAATGTAAATATGTGTATGGAAAGGTTgagaaggagagaaat-gaaacagaaagggagagaaagagagaaacggacagatgaagaccaggataaaggagaaCTGGAGAGGACTGAAAACATAGTTCTACTCCCAGCAGGGTCTCTGGGTGGTGGAATTGAGAAAACAATTGTCCCCACTAGTTGCTCATTTTGAAATTAGTAATTCACAGATTTTTGTCAATTATCTCCTATTAAAAGTTTTCAT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15560895 232 - 23502949 ATATAAAAATGTAGATATGTGTATGGAAAGGTTG---AGGagagaaat-gaaacagaaagggagagaaagagagaaacggacagatgaagaccaggataaaggagaaccagagagGAC---------------ACTCCCAGCAGGGTCTCTGGGTGGTGGAATTGAGAAAACAATTATCCCCACTAGTTGCTCATCTTGAAATTAGTAATTCACAGATTTTTATCAATTATCTCCTATTAAAAGTTTGAAT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169828954 249 + 171630274 ATATAAACATGGAAATATATGTAT-GAAAGATTGAGCAGGAGAGACATAGGAGCAGAAAGGGAGAGGAAGAGAGAAATGGACAGATGAAGACCAGGATAAAGGAGAGTGGGAGTGGGCTGAGAACATAGTTCTGTTACCAACAGGGTCTCCGGGTGGTGGGATTGAGAAAGCAATTGTCCCTGCTGGTTGCTCGTTCTTTAGTCAGTAATTCACAGATTTTTCTCAAGTATCTCCTATC-AAAGGTTTAAT i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1203919 251 - 2164891 ATATAAAAATGTAAATATATGTATGGAAAGATTGAGAAGGAGAGAAATAGGAGCGGAAAGGGAGAGGAAGAGAGAAATGGACAGATGAAGACCAGGATAAAGGAGAATAGGAGGGGGCAGAGAACACAGTTCTGTTATCAGCAGGGGTTCCAGGTGGTGGAATTGAGAAAACAATTGTCCCAGCTGGTTCCTTGTTTTTAAGTTAGTAATTCACAGATTTTTCTCAAGTATCTCCTATTAAAAGGTTGAAT i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1450546 250 - 1813869 GTATAAAAATGTAAATATATGCATGGAAAGATTGAGAAGGAGAGAAATAGGAGCAGAAAGGGAGAGGAAGAGAGAAACGGACTGATGAAGACCAGGAAGAAGGAGAACAGGAGTGGACTGAGAACACAGTTCTGTTACCAACGGGGTCTCCGGGTGGTGGAACTGGGGAAACAATTGTCCCTGCTGGTTGCTCATT-TTAAGTTAGTAATTCACAGATTTTTCTCAAGTATCTCTTATTAAAAGGTTTAAT i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10919439 171 - 12073884 ATGTAAAAATGTAACTATAGGTGTGGAAAGGTTG---GGGAGAGAAAC------------------------AGAATCTGGCA---------CAGGGCTGAGAAAGACAGAAGAG--CTGAGA--------------------------------GAAAAAATTG--------ACTCGCCCCACCACCT-CTTGTAATTTAATTTGCAATTCATA-ATTTTTTACAGTTATCTCGTGCTAGAAGTTTTAAT i otoGar3.GL873575 C 0 C 0 s dasNov3.JH569188 491705 221 + 760995 atatatatatatatatatTTGTACCAAAAGATTG---AGGAGTGAAAT------------AGAGAAAAAGAAAGAAATACAGACAGGAGGACAATGGGAAAAAAGGGATGGCCAGAATGATACACATGGGCATGTTAATAGAAGAATCTCTGGGTAGTAGAATTAAGAAAATAATTTTCCTCTCTTTCTTCCCACTTAAAAAAAAATTG---------------CAATCATTTCCTACTGCAAATTTTAAT i dasNov3.JH569188 I 2516 I 191 e saiBol1.JH378287 1251282 0 - 2905041 C e canFam3.chr1 56136027 2466 + 122678785 I e nomLeu3.chr3 156251705 0 + 157873769 C e panPan2.chr6 171742927 2 + 173848474 I e panTro5.chr6 173492874 2 + 175400573 I a score=45601.000000 s hg38.chr6_KB021644v2_alt 25466 9 + 185823 GGggctggg s gorGor5.CYUI01015032v1 11429029 9 - 12463322 GGggctggg i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170280818 9 + 172585720 GGggctggg i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169026427 9 - 170955103 GGggctggg i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8313666 9 + 10161646 GGggctggg i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1343265 9 + 3144229 GGggctggg i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96622400 9 + 98384682 GGggctgga i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8165296 9 - 10857215 GGggctggg i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15561127 9 - 23502949 GGggctgag i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169829203 9 + 171630274 GGgaccagg i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1204170 9 - 2164891 GGGACCAAG i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1450796 9 - 1813869 GGGACCAGG i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10919610 9 - 12073884 AAGGAAGGG i otoGar3.GL873575 C 0 I 152 e saiBol1.JH378287 1251282 0 - 2905041 C e dasNov3.JH569188 491926 191 + 760995 I e canFam3.chr1 56136027 2466 + 122678785 I e nomLeu3.chr3 156251705 0 + 157873769 C e panPan2.chr6 171742927 2 + 173848474 I e panTro5.chr6 173492874 2 + 175400573 I a score=1256918.000000 s hg38.chr6_KB021644v2_alt 25475 268 + 185823 tatggtggctcatgcctataatcccagcactttgggaggctgaggcgggtgggtcatttgaggtcagaagtttgagatctgtctgaccaacatggtgggactccatctctact-aaaatacaaaaattagccaggcattgtacctcacgcctgtaatcccagctcctcaggaagctga-ggcaggagaatcacttgaacccgggagacagaggttgcagtgagccaggatcacaccactgcactctggcctgggcgaccgagtgag------------------------------------------------------------------------------------------------------agtg s gorGor5.CYUI01015032v1 11429038 268 - 12463322 tatggtggctcatgcctataatcccagcactttgggaggctgaggcgggtgggtcatttgaggtcagaagtttgagatctgtctgaccaacatggtgggactccatctctact-aaaatacaaaaattagctgggcattgtacctcacgcctgtaatcccagctcctcaggaagctga-ggcaggagaatcacttgaacccgggagacagaggttgcagtgagccaggatcacaccactgcactccggcctgggcgaccgagtgag------------------------------------------------------------------------------------------------------agtg i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170280827 335 + 172585720 cgtggtggctcatgcctgtaatcccagcactttgggagactgaggcgggtgggtcatttgagctcagaagtttgagatcagcctgaccaacatggtgggactccgtctctactgaaaatacaaaaattagccgggcattgtgcctcatgtccgtaatcccagctcctcaggaagcaga-ggcaggagaatcacttgaacctgagaaacagaggttgcagtgagccaggatcacaccaccgcactccagcctgggcgactgagtgagactctatctc--------------aaaaaaaaaaaaaaaaGTTTTAACAAGG----------------------AAAAGAGCATAACAAAGctgggtgacctagtg i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169026436 330 - 170955103 cgtggtggctcatgcctgtaatcccagcactttgggagactgaggcgggtgggtcatttgagctcagaagtttgagatcagcctgaccaacatggtgggactccgtctctactgaaaatacaaaaattagccgggcattgtgcctcatgtccgtaatcccagctcctcaggaagcaga-ggcaggagaatcacttgaacctgagaaacagaggttgcagtgagccaggatcacaccaccgcactccagcctgggcgactgagtgagactctatctc-------------------aaaaaaaaaaaGTTTTAACAAGG----------------------AAAAGAGCATAACAAAGctgggtgacctagtg i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8313675 349 + 10161646 cgtggtggctcatgcctgtaatcccagcactttgggagactgaggcgggtgggtcatttgagctcagaagtttgagatcagcctgaccaacatggtgggactccgtctctactgaaaatacaaaaattagccgggcattgtgcctcatgtccgtaatcccagctcctcaggaagcaga-ggcaggagaatcacttgaacctgagaagcagaggttgcagtgagccaggatcacaccaccgcactccagcctgggcgactgagtgagactctatctcaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaGTTTTAACAAGG----------------------AAAAGAGCATAACAAAGctgggtgacctagtg i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1343274 340 + 3144229 cgtggtggctcatgcctgtaattccagcactttgggagactgaggcgggtgggtcttttgcactcagaagtttgagatcagcctgactaacatggtgggactccgtctctactgaaaatataaaaattagccgggcgttgtgcctcacgtccgtaatcccagctcctcaggaagctgagggcaggagaattgcttgaacccaggaggcggagctcgcagtgagccaggatcacgccactgcactccagcctgggtgactgagtgagactccatctc--------------aaaaaaaaaaaaaaaaa-------aaaGTTTTAACAAAG-----------AATAGAGCATAACAAAGctgggtgacctagtg i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96622409 341 + 98384682 cgtggtggctcatgcctgtaatcccagcactttgggagactgaggcgggtgggtcatttgagcttagaagtttgagatcagcctgaccaacatggtggggctccgtctctactgaaaatacaaaaattagcctggcgttgtgcctcaagtctgtaatcccagctcctcaggaagcgga-ggcaggagaatcacttgaa-ctgagaaacagaggttgcagtgagccaggatcatgccactgcactccagcctgggtgactgagtgagactccatctc-------aaaaaaaaaaaaaaaaaaaaaaaGTTTTTACAAGG----------------------AATAGAGCACAACAAAGGtgggtgacctagtg i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8165305 338 - 10857215 catggtggctcatgcctgtaattccagcactttgggagactgaggcaggtgggtcttttgcactcagaagtttgagatcagcctgactaacatggtgggactccgtctctactgcaaatataaaaattagccgggcattgtgcctcacgtccgtaatcccagctcctcaggaagtgga-ggcaggagaatcacttgaacctgagagacagaggttgcagtgagccaggatcacgccactgcactccagcctgggtgactgagtgagactctatct-----------aaaaaaaaaaaaaaaaaaaaGTTTTAACAAAG----------------------AATAGAGCATAACAAAGctgggtgacctagtg i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15561136 338 - 23502949 catggtggctcatgcctgtaatcccagcactttgggagactgaggcgggtgggtcatttgcgctcagaagtttgagatcagcctgaacaacatggtgggactccgtctctactgaaaatacaaaaattagccgggcgttgtgcctcatgtctgtaatcccagctcctcaggaagctga-ggcaggagaatcacttgaacctgagagacagaggttgcagtgagccaggattacgccactgcactccagcctaggtgactgagtgagaccccatctc--------------aaaaaaaaaaaaaaaa--------aaaG-----------TTTTGATAAGGAATAGAGCATAACAAAGctgggtgacctagtg i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169829212 244 + 171630274 cacggtggctc------------ccagcagtttgggaggccgaggtgggcagatcatttgaggtcaggagcttgagaccagcctgaccaacatggtaaga--ccgtctctact---aatac-aaaattagctgggtgtggtggct-aagcctgttatcccacctactcaggaggctga-ggcaagagaatcacttgaatccaggaggcggatgttgcagtgagctggaattgagccactgcactccagcctgggcaaccgagtg------------------------------------------------------------------------------------------------------------ i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1204179 253 - 2164891 CATGGCGGCGc------------ccagcattttgggaggccgaggtgggcagatcatttgaggtcaggagtttgagaccagcctgaccaacatggtaagactctgtctctact---aatac-aaaattagctgggtgtggtggctcacgcctgtaatcccagctactcaggaggctga-ggcaagagaatcacttcaacccaggaggcggatgttgcggtgagctggaattgcgccactgccctccagcctgggcaactgagtgagactc------------------------------------------------------------------------------------------------------ i cebCap1.NW_016107695v1 C 0 I 12 s aotNan1.NW_018494782v1 1450805 253 - 1813869 CATGGTGGCtc------------ccagcattttgggaggccgaggtgggcagatcatttgaggtcaggagtttgagaccagcctgaccaacatggtaagactctgtctctact---aatac-aaaactagctgggtgtggtggctcacgcctgtaatcccagctactcaggaggctga-ggcaagagaatcacttgaatccaggaggcggatgtcgcagtgagctggaattgcaccactgcactccagcctgggcaaccgagtgagactc------------------------------------------------------------------------------------------------------ i aotNan1.NW_018494782v1 C 0 I 17 e otoGar3.GL873575 10919619 152 - 12073884 I e saiBol1.JH378287 1251282 0 - 2905041 C e dasNov3.JH569188 491926 191 + 760995 I e canFam3.chr1 56136027 2466 + 122678785 I e nomLeu3.chr3 156251705 0 + 157873769 C e panPan2.chr6 171742927 2 + 173848474 I e panTro5.chr6 173492874 2 + 175400573 I a score=52285.000000 s hg38.chr6_KB021644v2_alt 25743 21 + 185823 agactcctc------aaaaaaaaaaag s gorGor5.CYUI01015032v1 11429306 27 - 12463322 agactccttctcaaaaaaaaaaaaaaa i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170281162 20 + 172585720 agactccatctc-------aaaaagaa i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169026766 20 - 170955103 agactccatctc-------aaaaagaa i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8314024 20 + 10161646 agactccatctc-------aaaaagaa i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1343614 20 + 3144229 agactccatctc-------aaaaagaa i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96622750 20 + 98384682 agactccatctc-------aaaaagaa i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8165643 20 - 10857215 agactccatctc-------aaaaagaa i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15561474 20 - 23502949 agactccatctc-------aaaaagaa i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169829456 19 + 171630274 agactccatctc-------acacaaa- i calJac3.chr4 C 0 C 0 e otoGar3.GL873575 10919619 152 - 12073884 I e saiBol1.JH378287 1251282 0 - 2905041 C e aotNan1.NW_018494782v1 1451058 17 - 1813869 I e cebCap1.NW_016107695v1 1204432 12 - 2164891 I e dasNov3.JH569188 491926 191 + 760995 I e canFam3.chr1 56136027 2466 + 122678785 I e nomLeu3.chr3 156251705 0 + 157873769 C e panPan2.chr6 171742927 2 + 173848474 I e panTro5.chr6 173492874 2 + 175400573 I a score=10614.000000 s hg38.chr6_KB021644v2_alt 25764 4 + 185823 aaaa s gorGor5.CYUI01015032v1 11429333 4 - 12463322 aaaa i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170281182 4 + 172585720 aaaT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169026786 4 - 170955103 aaaT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8314044 4 + 10161646 aaaT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1343634 4 + 3144229 aaaa i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96622770 4 + 98384682 aaaC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8165663 4 - 10857215 aaaa i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15561494 4 - 23502949 aaaa i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169829475 4 + 171630274 aaCC i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1204444 4 - 2164891 aaaC i cebCap1.NW_016107695v1 I 12 C 0 e otoGar3.GL873575 10919619 152 - 12073884 I e saiBol1.JH378287 1251282 0 - 2905041 C e aotNan1.NW_018494782v1 1451058 17 - 1813869 I e dasNov3.JH569188 491926 191 + 760995 I e canFam3.chr1 56136027 2466 + 122678785 I e nomLeu3.chr3 156251705 0 + 157873769 C e panPan2.chr6 171742927 2 + 173848474 I e panTro5.chr6 173492874 2 + 175400573 I a score=623107.000000 s hg38.chr6_KB021644v2_alt 25768 142 + 185823 aGTTTTAATAAGGAATAGAGCATAACAAAGCAG-GAGCTAAGTGAGTGAGAACTGTTTCCACT---------------------------GGAAG-------------------------------------CCCAGCATCGTC----------------AGCAGCAAGTGCCTCTTTAGGAGGCAAAGTTCCAGCCAAAGTCAGGGCCAAAGGTAACAGCAG s gorGor5.CYUI01015032v1 11429337 142 - 12463322 aGTTTTAATAAGGAATAGAGCATAACAAAGCAG-GAGCTAAGTGAGTGAGAACTCTTTCCACT---------------------------GGAAG-------------------------------------CCCAGCATCGTC----------------AGCAGCAAGTGCCTCTTTAGGAGGCAAAGTTCCAGCCAAAGTCAGGGCCAAAGGTAACAGCAG i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170281186 136 + 172585720 AGTTTTAACAAGGAATAGAGCATGACAAAGCAG-G-GCTAAGTAAGTGAGAACCATCTCCACT---------------------------GGA------------------------------------------AGCATCGTC----------------AGCAGCAAGTGCTTCTTCAGGAGACAAAGTTCCAGCCAAAGTCAGGGCCAAAGGTAACAGCAG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169026790 136 - 170955103 AGTTTTAACAAGGAATAGAGCATGACAAAGCAG-G-GCTAAGTAAGTGAGAACCGTCTCCACT---------------------------GGA------------------------------------------AGCATCGTC----------------AGCAGCAAGTGCTTCTTTAGGAGACAAAGTTCCAGCCAAAGTCAGGGCCAAAGGTAACAGCAG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8314048 136 + 10161646 AGTTTTAACAAGGAATAGAGCATGACAAAGCAG-G-GCTAAGTAAGTGAGAACCGTCTCCACT---------------------------GGA------------------------------------------AGCATCGTC----------------AGCAGCAAGTGCTTCTTTAGGAGACAAAGTTCCAGCCAAAGTCAGGGCCAAAGGTAACAGCAG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1343638 136 + 3144229 aGTTTTAATAAGGAATAGAGCGTGACAAAGCAG-G-GCGAAGTAAATGAGAACTGTCTCCACT---------------------------GGA------------------------------------------AGCATCGTC----------------AGCAGCAAGTGCTTCTTTGGGAGACAAAGTTCCAGCCAAAGTCAGGGCCAAAGGTAACAGCAG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96622774 136 + 98384682 AGTTTTAATAAAGAATAGAGCATGACAAAGCAG-G-GCTAAGTAAGTGAGAACCCTCTCCACT---------------------------GGA------------------------------------------GGCATCGTC----------------AGCAGCAAGTGCTTCTTTAGGAGACAAAGTTCCAGCCAAAGTCAGGGCCAAAGGTAACGGCAG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8165667 136 - 10857215 aGTTTTAATAAGGAATAGAGCGTGACAAAGCAG-G-GCTAAGTAAATGAGAACTGTCTCCACT---------------------------GGA------------------------------------------AGCATCGTC----------------AGCAGCAAGTGCTTCTTTGGGAGACAAAGTTCCAGCCAAAGTCAGGGCCAAAGGTAACAGCAG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15561498 136 - 23502949 aGTTTTAATAAGGAACAGAGCATAACCAAGCAG-G-GCTAAGTAAGTGAGAACTGTCTCCACT---------------------------GGA------------------------------------------AGCATCGTC----------------AGCAGCAAGTGCTTCTTTAGGAGACGAAGTTCCAGCCAAAGTCAGGGCCAAAGGTAACAGCAG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169829479 140 + 171630274 AGTTGTAATAAGGAATACAGCATAACACAGCAGTG-GCTGAGTGCGTG-AAACTATTCCCAGT---------------------------GGAAA-------------------------------------CCCAGCATCTTC----------------AGCAAC-AGCGACTCTTTAGGAGGCAAAGTTCCAGCCGAGGTCAGGGCCAAAGGTACCAGCAG i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1204448 222 - 2164891 AGTTTTAATAAGGAATAGAGTAGAACACAGCAGTG-GCTAAGTGAGTGAAAACTGTTCCCAGCATCGTCAGCAACAGTGTCTCTTTAGGAGGCAAAGTTCCAGCCAAGGTCAGGGTCAAAGGTACCAGCTGCCCCTGCATCCTATGTGATTTTAAATCTGAGCAACAAGTGCCGCTTTAGGAGGCAAAGTTCTAGTCAAGGTCAGGGCCAAAGGTACCAGCTG i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1451075 141 - 1813869 AGTTTTAATAAGGAATAGAGTATAACACAGCAGTG-GCTAAATGATTGAAAACTGTTCCCAGT---------------------------GGAAA-------------------------------------CCCAGCACCGTC----------------AGCAAC-AGTGTCTCTTTAGGAGGCAAAGTTCCAGCCAAGGTCAGGGCCAAAGGTACCAGCAG i aotNan1.NW_018494782v1 I 17 M 3395 e otoGar3.GL873575 10919619 152 - 12073884 I e saiBol1.JH378287 1251282 0 - 2905041 C e dasNov3.JH569188 491926 191 + 760995 I e canFam3.chr1 56136027 2466 + 122678785 I e nomLeu3.chr3 156251705 0 + 157873769 C e panPan2.chr6 171742927 2 + 173848474 I e panTro5.chr6 173492874 2 + 175400573 I a score=752777.000000 s hg38.chr6_KB021644v2_alt 25910 206 + 185823 ACCTGGCATACTATGTGATTTTTAAGCTGTTTGTTGTCTCTC--ATCTCTCTTTATCCAATAGGAGATACAAGTGTTTTTTGTTTGTTTGtttttaaattttt-ttaa-----------------------------------------------------------------------------------aaagtagagatggagttttgt-catgttgctcagtctgg-------------------------------tcttgaaatcctggacttaagtga-tcatcctgtctcagcctccaaaagtgctgagattacagg s gorGor5.CYUI01015032v1 11429479 208 - 12463322 ACCCGGCATACTATGTGATTTTTAAGCTGTTTGTTGTCTCTCTCATCTCTCTTTATCCAATAGGAGATACAAGTGTTTTTTGTTTGTTTGtttttaaattttt-ttaa-----------------------------------------------------------------------------------aaagtagagatggagttttgt-catgttgctcagtctgg-------------------------------tcttgaaatcctggacttaagtga-tcatcctgtctcagcctccaaaagtgctgagattacagg i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170281322 209 + 172585720 ACTTTGCGTACTATGTGATTTTTAAGCTGTTTGTCATCTCTCTCATCTCTCTTTATCCAATAGGAGATACAAGTGATTTTTGTTTGTTTGCttttaaattttttttaa-----------------------------------------------------------------------------------aaagtagagatggagttttgc-catgttgctcagtctgg-------------------------------tcttgaactcctggacttaagtga-tcatcctgtctcagcctccaaaagtgctgagattatagg i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169026926 209 - 170955103 ACTCTGCGTACTATGTGATTTTTAAGCTGTTTGTCATCTCTCTCATCTCTCTTTATCCAATAGGAGATACAAGTGATTTTTGTTTGTTTGCTTTAAAATTTTTTTTAA-----------------------------------------------------------------------------------AAAgtagagatggagttttgc-catgttgctcagtctgg-------------------------------tcttgaactcctggacttaagtga-tcatcctgtctcagcctccaaaagtgctgagattatagg i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8314184 209 + 10161646 ACTCTGCGTACTATGTGATTTTTAAGCTGTTTGTCATCTCTCTCATCTCTCTTTATCCAATAGGAGATACAAGTGATTTTTGTTTGTTTGCttttaaattttttttaa-----------------------------------------------------------------------------------aaagtagagatggagttttgc-catgttgctcagtctgg-------------------------------tcttgaactcctggacttaagtga-tcatcctgtctcagcctccaaaagtgctgagattatagg i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1343774 266 + 3144229 ACTCTGTGTACTATGTGATTTTTAAGCTGTTTGTCATCTCTCTGGTTTCTCTTTATCCA-------ATACAAATGTTTTTTGTTTGTTTGCTTTTAAATTTTTGTTAAAATTAAAAAAATTTTAAAATAAAAAT-----------A-------ATTAAAATAAAAAATTAAAAATTAAtttttttttttttaaagtagagatggagttttgc-catgttgctcagtctgg-------------------------------tcttgaactcctggac-taagtga-tcatcctgtctcagcctccaaaagtgctgagattacagg i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96622910 268 + 98384682 ACTCTGCGTACTATGTGATTTTTAAGCTGTTTGTCGTCTCTCTCATCTCTCTTTATCCA-------ATACAAGTGTTTTTTGTTTGTTTGCTTTTAAATTTTTTTT-AAATTAAAaaaattttaaaataaaaat-----------aattaaaattaaaaattaaaaattaaa-----tttttttttttttaaaagtagagatggagtttttc-catgttgctcagtctgg-------------------------------tcttgaactcctggacttaagtga-tcatcctgtctcagcctccaaaagtgctgagattacagg i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8165803 267 - 10857215 ACTCTGCGTACTATGTGATTTTTAAGCTGTTTGTCGTCTCTCTCGTTTCTCTTTATCCA-------ATACAAGTGTTTTTTGTTTGTTTGCTTTTAAATTTTTGTTAAAATTTAAAAAATTTTAAAATAAAAATAATTAAAATAAA-----------AAATTAAAAATTAAA------ttttttttttttaaaagtagagatggagttttgc-catgttgctcagtctgg-------------------------------tcttgaactcctggac-taagtga-tcatcctgtctcagcctccaaaagtgctgagattacagg i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15561634 207 - 23502949 ACTCTGCGTACTATGTGATTTTTAAGCTGTTTGTCGTTTCTCTCCTCTCTCTTTATCCAATAGG--AGACAAGTGCTTTTTGTTTGTTTGCttttaaattttttttaa-----------------------------------------------------------------------------------aaagtagagatggagttttgc-catgttgctcagtctgg-------------------------------tcttgaactcctggacttaagtga-tcatcctgtctcagcctccaaaagtgctgagattacagg i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169829619 232 + 171630274 CCCCTGCATCCTATGTGATTTTAAAGCTGTTTGTCACCGCTCTCATCTCTCTTTATCCAACAGGAGATACAAGTGttttttgtttgtttatttta----ttttatt-----------------------------------------------------------------------------------------ttgagacggagtttcactcttgttaccaaggctggagtgcaatggcgcgatctcggctcaccgaaacctctgcctcctgggttcaggcaatttctcctgcctcagcctcctgagtagctgggattacagg i calJac3.chr4 C 0 I 926 s cebCap1.NW_016107695v1 1204670 209 - 2164891 CCCCTGCATCCTATGTGATTTTAAAGCTATTTGTCGTCTCTCTCATCTCTCTTTATCCAACAGGAGATACAAGtgttttttgtttgtttg----------tttattAAAAAAAAAAAA-------------------------------------------------------------------------AAAAtagagatagagttttgc-catgttgctcagtctgg-------------------------------tcttgaactcctggacttaagtga-tcatcctgtctcagcctctgaaagtggtgggattgcggg i cebCap1.NW_016107695v1 C 0 C 0 e otoGar3.GL873575 10919619 152 - 12073884 I e saiBol1.JH378287 1251282 0 - 2905041 C e aotNan1.NW_018494782v1 1451216 3395 - 1813869 M e dasNov3.JH569188 491926 191 + 760995 I e canFam3.chr1 56136027 2466 + 122678785 I e nomLeu3.chr3 156251705 0 + 157873769 C e panPan2.chr6 171742927 2 + 173848474 I e panTro5.chr6 173492874 2 + 175400573 I a score=61631.000000 s hg38.chr6_KB021644v2_alt 26116 17 + 185823 cgtgagacactgcgtct s gorGor5.CYUI01015032v1 11429687 17 - 12463322 catgagacactgcgtct i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170281531 17 + 172585720 cgtgaggcactgcgtct i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169027135 17 - 170955103 cgtgaggcactgcgtct i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8314393 17 + 10161646 cgtgaggcactgcgtct i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1344040 17 + 3144229 cgtgaggcactgcgtct i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96623178 17 + 98384682 cgtgaggcactacgtct i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8166070 17 - 10857215 cgtgaggcactgcgtct i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15561841 17 - 23502949 cgtgaggcactatgtct i colAng1.NW_012114488v1 C 0 C 0 s cebCap1.NW_016107695v1 1204879 17 - 2164891 catgagccagtgcatct i cebCap1.NW_016107695v1 C 0 C 0 e otoGar3.GL873575 10919619 152 - 12073884 I e saiBol1.JH378287 1251282 0 - 2905041 C e aotNan1.NW_018494782v1 1451216 3395 - 1813869 M e calJac3.chr4 169829851 926 + 171630274 I e dasNov3.JH569188 491926 191 + 760995 I e canFam3.chr1 56136027 2466 + 122678785 I e nomLeu3.chr3 156251705 0 + 157873769 C e panPan2.chr6 171742927 2 + 173848474 I e panTro5.chr6 173492874 2 + 175400573 I a score=41752.000000 s hg38.chr6_KB021644v2_alt 26133 10 + 185823 ggccCCAGAA s gorGor5.CYUI01015032v1 11429704 10 - 12463322 ggccCCAGAA i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170281548 10 + 172585720 ggccCCAGAA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169027152 10 - 170955103 ggccCCAGAA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8314410 10 + 10161646 ggccCCAGAA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1344057 10 + 3144229 ggccCCAGAA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96623195 10 + 98384682 ggccCCAGAA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8166087 10 - 10857215 ggccCCAGAA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15561858 10 - 23502949 ggccCCAGAA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169830777 10 + 171630274 GGCCAGAGAT i calJac3.chr4 I 926 C 0 s cebCap1.NW_016107695v1 1204896 10 - 2164891 ggccAGAGAT i cebCap1.NW_016107695v1 C 0 C 0 e otoGar3.GL873575 10919619 152 - 12073884 I e saiBol1.JH378287 1251282 0 - 2905041 C e aotNan1.NW_018494782v1 1451216 3395 - 1813869 M e dasNov3.JH569188 491926 191 + 760995 I e canFam3.chr1 56136027 2466 + 122678785 I e nomLeu3.chr3 156251705 0 + 157873769 C e panPan2.chr6 171742927 2 + 173848474 I e panTro5.chr6 173492874 2 + 175400573 I a score=37555.000000 s hg38.chr6_KB021644v2_alt 26143 8 + 185823 ACAAGTGC s gorGor5.CYUI01015032v1 11429714 8 - 12463322 ACAAGTGC i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170281558 8 + 172585720 ACAAGTGC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169027162 8 - 170955103 ACAAGTGC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8314420 8 + 10161646 ACAAGTGC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1344067 8 + 3144229 ACAAGTGC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96623205 8 + 98384682 ACAAGTGC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8166097 8 - 10857215 ACAAGTGC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15561868 8 - 23502949 ACAAGTGC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169830787 8 + 171630274 ACCAGCGT i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1204906 8 - 2164891 ACCAGCGT i cebCap1.NW_016107695v1 C 0 C 0 s otoGar3.GL873575 10919771 8 - 12073884 ACAGATGT i otoGar3.GL873575 I 152 C 0 e saiBol1.JH378287 1251282 0 - 2905041 C e aotNan1.NW_018494782v1 1451216 3395 - 1813869 M e dasNov3.JH569188 491926 191 + 760995 I e canFam3.chr1 56136027 2466 + 122678785 I e nomLeu3.chr3 156251705 0 + 157873769 C e panPan2.chr6 171742927 2 + 173848474 I e panTro5.chr6 173492874 2 + 175400573 I a score=41245.000000 s hg38.chr6_KB021644v2_alt 26151 6 + 185823 TGGGCA s panTro5.chr6 173492876 6 + 175400573 TGGGCA i panTro5.chr6 I 2 C 0 s panPan2.chr6 171742929 6 + 173848474 TGGGCA i panPan2.chr6 I 2 C 0 s gorGor5.CYUI01015032v1 11429722 6 - 12463322 TGAGCA i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170281566 6 + 172585720 TGAGCA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169027170 6 - 170955103 TGAGCA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8314428 6 + 10161646 TGAGCA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1344075 6 + 3144229 TGAGCA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96623213 6 + 98384682 TGAGCA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8166105 6 - 10857215 TGAGCA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15561876 6 - 23502949 TGAGCA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169830795 6 + 171630274 TGAGTG i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1204914 6 - 2164891 TGAGTG i cebCap1.NW_016107695v1 C 0 C 0 s otoGar3.GL873575 10919779 6 - 12073884 TGGGCA i otoGar3.GL873575 C 0 C 0 e saiBol1.JH378287 1251282 0 - 2905041 C e aotNan1.NW_018494782v1 1451216 3395 - 1813869 M e dasNov3.JH569188 491926 191 + 760995 I e canFam3.chr1 56136027 2466 + 122678785 I e nomLeu3.chr3 156251705 0 + 157873769 C a score=2328938.000000 s hg38.chr6_KB021644v2_alt 26157 362 + 185823 CAGTGGAATGGCACGCCAAGGTGTGGAGGCC----GGAGGTCAGTATCCATCTGCACAGGTTTAGGGGAAAGTTGCCCAACACACTAAAGGCCA-CTGCACAAGACAACTGTCTCTT--TATGGTCC-------------CAGCAA-------------CTTTATGGCTCCAGCTGACCTGCATGGCCATGTGTCATGTTACACATTACGGCTGGCATGACCCCTCCACAGCCATGTT-TAGTCA-GGACTGGAGAGCATGGATTCCCT--CCAGCACCCAGTTGA--GTCTTGTTT-GTATCAACACA--GATGTGCATGCTGGAGA-CAGCCCCT-ACTTTCTTAACAGTCCCAGCA-GCTGGGCACAGATCCAGACA-TCAG-CACTGCTGGGAACGGCAGGCCAA s panTro5.chr6 173492882 362 + 175400573 CAGTGGAATGGCACGCCAAGGTGTGGAGGCC----GGAGGTCAGCATCCATCTGCACAGGTTTAGGGGAAAGTTGCCCAACACACCAAAGGCCA-CTGCACAAGACAACTGTCTCTT--TATGGTCC-------------CAGCAA-------------CTTTATGGCTCCAGCTGACCTGCACGGCCATGTGTCATGTTACACATTACGGCTGGCATGACCCCTCCGCAGCCATGTT-TAGTCA-GGACTAGAGAGCATGGATTCCCT--CCAGCACCCAGTTGA--GTCTTGTTT-GTATCAACACA--GATGTGCATGCTGGAGA-CAGCCCCT-ACTTTCTTAACAGTCCCAGCA-GCTGGGCACAGATCCAGACA-TCAG-CACTGCTGGGAACGGCAGGCCAA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171742935 362 + 173848474 CAGTGGAATGGCACGCCAAGGTGTGGAGGCC----GGAGGTCAGCATCCATCTGCACAGGTTTAGGGGAAAGTTGCCCAACACACCAAAGGCCA-CTGCACAAGACAACTGTCTCTT--TATGGTCC-------------CAGCAA-------------CTTTATGGCTCCAGCTGACCTGCACGGCCATGTGTCATGTTACACATTACGGCTGGCATGACCCCTCCGCAGCCATGTT-TAGTCA-GCACTAGAGAGCATGGATTCCCT--CCAGCACCCAGTTGA--GTCTTGTTT-GTATCAACACA--GATGTGCATGCTGGAGA-CAGCCCCT-ACTTTCTTAACAGTCCCAGCA-GCTGGGCACAGATCCAGACA-TCAG-CACTGCTGGGAACGGCAGGCCAA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11429728 362 - 12463322 CAGCGGAATGGCACGCCAAGGTGTGGAGGCC----GGAGGTCAGTATCCGTCTGCACAGGTTTAGGGGAAAGTTGCCCAACACACCAAAGGCCA-CTGCACAAGACAACTGTCTCTT--TATGGTCC-------------CTGCAA-------------CTTTATGGCTCCAGCTGACCTGCACGGCCATGTGTCATGTTACACATTACGGCTGGCATGACCCCTCCGCAGCCATGTT-TAGTCA-GGACTGGAGAGCATGGATTCCCT--CCAGCACCCAGTTGA--GTCTTGTTT-GTATCAACACA--GATGTGCATGCTGGAGA-CAGCCCCT-ACTTTCTTAACAGTCCCAGCA-GCTGAGCACAGATCCAGACA-CCAG-CACTGCTGGGAACGGCAGGCCAA i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170281572 365 + 172585720 CAGTGGAATGGCATGCCAAGGTGTGGGGGCCA-GAGGAGGTCAGTATCCTCCTGCACAGGTTTAGGGGAAAGTTGCCCAACACACCAAAGGCCA-CTGCACAAGACAACTGTCTCTT--TATGATCC-------------CAGCAA-------------CAttatgactgcagctgacctgcacggccatgtgttatgttatacatcagggctggcatgagccctctgcagctgtgtt-tagtca-ggactagagagcatggtttcact--ccagcacccagttga--gtcttgttt-gtatcaataca--gatgtgcatgctggaga-cagcccct-actttcttatcagcctcagca-cctgggcacagatccagaca-tcag-cgctgttgggaacagcaggccaa i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169027176 365 - 170955103 CAGTGGAATGGCATGCCAAGGTGTGGGGGCCA-GAGGAGGTCAGTATCCTCCTGCACAGGTTTAGGGGAAAGTTGCCCAACACACCAAAGGCCA-CTGCACAAGACAACTGTCTCTT--TATGATCC-------------CAGCAA-------------CATTATGACTGCAGCTGACCTGCACGGCCATGTGTTATGTTATACATCAGGGCTGGCATGAGCCCTCTGCAGCTGTGTT-TAGTCA-GGACTAGAGAGCATGGTTTCACT--CCAGCACCCAGTTGA--GTCTTGTTT-GTATCAATACA--GATGTGCATGCTGGAGA-CAGCCCCT-ACTTTCTTATCAGCCTCAGCA-CCTGGGCACAGATCCAGACA-TCAG-CGCTGTTGGGAACAGCAGGCCAA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8314434 365 + 10161646 CAGTGGAATGGCATGCCAAGGTGTGGGGGCCA-GAGGAGGTCAGTATCCTCCTGCACAGGTTTAGGGGAAAGTTGCCCAACACACCAAAGGCCA-CTGCACAAGACAACTGTCTCTT--TATGATCC-------------CAGCAA-------------CATTATGACTGCAGCTGACCTGCACGGCCATGTGTTATGTTATACATCAGGGCTGGCATGAGCCCTCTGCAGCTGTGTT-TAGTCA-GGACTAGAGAGCATGGTTTCACT--CCAGCACCCAGTTGA--GTCTTATTT-GTATCAATACA--GATGTGCATGCTGGAGA-CAGCCCCT-ACTTTCTTATCAGCCTCAGCA-CCTGGGCACAGATCCAGACA-TCAG-CGCTGTTGGGCACAGCAGGCCAA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1344081 365 + 3144229 CAGTGGAATGGCATGCCAAGGTGTGGGGGCCG-GAGGAGATCAGTATCCTCTTGCACAGGTTTAGGTGAAAGTTGCCCAACACACCAAAGGCCA-CTGCACAAGGCAACTGTCTCTT--TATGATCC-------------CAGCAA-------------CATTATGACTGCAGCTGACCTGCACGGCCATGTGTTATATTATACATCAGGGCTGGCATGAGCCCTCTGCAGCTGTGTT-TAGTCA-GGACTAGAGAACATGGTTTCACT--CCAGCACCCAGTTGA--GTCTTGTTT-GTATCAATACA--GATGTGCATGCTAGAGA-CAGCCCCT-ACTTTCTTATCAGCCCCAGCA-CCTGGGCACAGATCCAGACA-TCAG-CACGGCTGGGAACAGCAGGCCAA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96623219 365 + 98384682 CAGTGGAATGGCATGCCAAGGTGTGCGGGCCA-GAGGAGGTCAGTATCCACCTGCACAGGTTTAGGGGAAAGTTGCCCAACACACCAAAGGCCG-CTGCACAAGACAACTGTCTCTT--TATGGTCC-------------CAGCAA-------------CATTATGACTGCAGCTGACCTGCACGGCCACGTGTTATGTTATACATCAGGGCTGGCATGAGCCTTCTGCAGCTGTGTT-TAGTCA-GGACTAGAGAGCATGGTTTCACT--CCAGCACCCAGTTGA--GTCTTATTT-GTATCAATACA--GATGTGCATCCTGGAGA-CAGCCCCT-GCTTTCTTATCAGCCCCAGCA-CCTGGGCACAGATCCAGACA-TCGG-CACGGCTGGGAACAGCAGGACAA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8166111 365 - 10857215 CAGTGGAATGGCATGCCAAGGTGTGGGGGCCA-GAGGAGGTCAGTATCCTCCTGCACAGGTTTAGGTGAAAGTTGCCCAACACACCAAAGGCCA-CTGCACAAGACAACTGTCTCTT--TATGGTCC-------------CAGCAA-------------CATTATGACTGCCGCTGACCTGCACGACCATGTGTTATGTTATACATCAGGGCTGGCATGAGCCCTCTGCAGCTGTGTT-TAGTCA-GGACTAGAGAACATGGTTTCACT--CCAGCACCCAGTTGA--GTCTTGTTT-GTATCAATACA--GTTGTGCATGCTGAAGA-CAGCCCCT-ACTTTCTTATCAGCCCCAGCA-CCTGGGCACAGATCCAGACA-TCAG-CACGGCTGGGAACAGCAGGCCAA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15561882 365 - 23502949 CAGTGGAATGGCATGCCAAGGTGTGGGGGCCA-GAGGAGGTCAGTATCCACCTGTACAGGTTTAGGGGAGAGTTGCCCAACACACCAAAGGCCA-CCGCACAAGACAGCTGTCTCTT--CATGGTCC-------------CAGCAA-------------CAttatgactgcagctgacctgcacggccatgtgttatgttacacatcagggctggcaggagccctctgcagctgtgtt-tagtca-ggactagagagcatggtttcact--ccagcacccagttga--gtcttgttt-gtatcaataca--gatgtgcatgctggaga-cagcccct-actttcttgtcagccccagca-cctgggcacagatccagaca-tcag-cactgctgggaacagcaggccaa i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169830801 355 + 171630274 GAGTGGAAGGGCACGCCAAGGTGGGGAGGCCG---GGTGGTCAGGATCCACCTGCACAGGTTCCGGAGAAAGTGGTCCAACACACCAATGGCCG-CTGCACAAGACAACTGTCTCT----AAGGTCC-------------CAGCAC-------------CTTGATGGCTCCAGCTGACCTGCACGGCCATGTGTCACATGACA--TCAGCGCTGGCATGACCCCTCTGCATCCATGTG-GAGTGA-GGACAGGAGAGCATGGACCCACT--CCCGCACCTGGTGGA--GTCTTGTCT-G--TCAGCACC--AACGTGGACCCTGAAGA-TGGCCCCT-GCTTTCCGATCTG--CCGACG-TCTGGGCACAGATCCAGGCC-TCAG-CACTGCTGGGAACCGCAGACCGC i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1204920 359 - 2164891 GAGTGGAGGGGCATGCCAAGGCGCTGAGGCCG---GGTGGTCAGGAACCACCTGCACAGGTTCCAGGGAATGTGGTCCAACACACCAAAGGCCG-CTGCACAAGACAACTGTCTCT----AAGGTGC-------------CAGCAA-------------CTTGATGGCTCCAGCTGACCTGCACGGCCATGTGTCACGTGACATGTCAGCGCTGGCATGACCCCTCTGCATCCATGTG-GAGCGA-GGACAGGACAGCATGGATCCACT--CCTGCCCCCAGTGGA--GTCTTGTTT-GTATCAGCACA--GATGCGTACCCTGAAGA-CGGCCCCT-GCTTTCCTATCCG--CCGGTG-TCTGGGCACAGGTCCAGACA-TCAG-CACTGCTGGAAACTGCAGACCAT i cebCap1.NW_016107695v1 C 0 C 0 s otoGar3.GL873575 10919785 343 - 12073884 CAGTAAAGTGACATGACGAGATGCAGGGACCG-GGGCAGGTCATTATCCCTCTGCACAG------------------------ACCCAAGGCCACCTGTGAAGGACGGCTGCCTTTTAATACCATTC-------------CCACAAAGTCCTGCGTGAGCTCGACGGCTCCTACTGACCCACGTGGCAGAGGGTGACACTGCACGTTGGGGCTGACATGGACC-TGTCTAGC--TGCC-TGGTCA-GGGCAGGAGCGTGTATGGCCC--------TGTCCAACTGT--GTCATCAGG-GCAGGAGCACATGGGTGTGCA---TGGAGC-CAGCCTAG-CATGTGCCCTCGGCCACA-CA-GCTG-GTGCACATCCAGCCA--CAG-CCCTGCTGGGCACC-TGGGTCCA i otoGar3.GL873575 C 0 C 0 s dasNov3.JH569188 492117 386 + 760995 CGGTGAAGTACTATGTCAAGAAGTGGACACCAGGAGAAGTTAATTTTCCATCAGCACAGGTT-AGGAGAAAATTGCCCAACATACCGGAGGCCT-CTGCGAAGGACGGTTGTCATTTAATAGGGTGTGCAGCAAATCATACATCAA-------------CTTTAGGGTCCCAGCTGACCCGTGTGGCTGTGCGTAATATCACACGTGGAGGCTGGGACGACTCTTTGGCAGCTGTGTCAAAGCCACGGGCAGAAGAAAATGCATTCACTTACAACCAACCAGGTAAAGGCCTTCTTTCGCGTCACCCAA--GATGTG--TGCTGGGAATCAACGTCTGGATTTCATTTCAGCCTCAGCAGCCTGGGAAAAGATCCAGCCAATCAGAAACTGC----AATTGCAGGCCAA i dasNov3.JH569188 I 191 I 211 e saiBol1.JH378287 1251282 0 - 2905041 C e aotNan1.NW_018494782v1 1451216 3395 - 1813869 M e canFam3.chr1 56136027 2466 + 122678785 I e nomLeu3.chr3 156251705 0 + 157873769 C a score=814484.000000 s hg38.chr6_KB021644v2_alt 26519 131 + 185823 GCCGGGCACGCAGTAGG--GCCTGTGCCTTGCTCTGGGTGTCCTGTCGTGCG--GTGGAGGG--TAGCCTCCAGG--CAGATCGCCATCCTT---GGCACGACCACTGCAGGTCATTTCACACTGGGGCCCCTGTGGTCTTG s panTro5.chr6 173493244 131 + 175400573 GCCGGGCACGCAGTAGG--GCCTGTGCCTTGCTCTGGGTGTCCTGTCGTGCG--GTGGAGGG--TAGCCTCCAGG--CAGATCGCCATCCTT---GGCACGACCACTGCAGGTCATTTCACACTGGGGCCCCTGTGGTCTTG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171743297 131 + 173848474 GCCGGGCACGCAGTAGG--GCCTGTGCCTTGCTCTGGGTGTCCTGTCGTGCG--GTGGAGGG--TAGCCTCCAGG--CAGATCGCCATCCTT---GGCACGACCACAGCAGGTCATTTCACACTGGGGCCCCTGTGGTCTTG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11430090 131 - 12463322 GCCGGGCACGCAGTAGG--GCCTGTGCCTTGCTCTGGGTGTCCTGTCGTGCG--GTGGAGGG--TAGCCTCCAGG--CAGATCGCCATCCTT---GGCACGACCACTGCAGGTCATTTCACACTGGGGCCCCTGTGGTCTTG i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170281937 131 + 172585720 gccaggCACGCAGTGGG--GCCTGTGCCTCACTCTAGGTGTCCTGTCGTGCG--GTGGAGGG--TAGCCTCCAAG--CAGACCACCATCCTG---GATGCGACCACTGCAGGTCATTTCACACTGGGATCCCTGTGGTCTTG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169027541 131 - 170955103 GCCAGGCACGCAGTGGG--GCCTGTGCCTCACTCTAGGTGTCCTGTCGTGCG--GTGGAGGG--TAGCCTCCAAG--CAGACCACCATCCTG---GATGCGACCACTGCAGGTCATTTCACACTGGGATCCCTGTGGTCTTG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8314799 131 + 10161646 GCCAGGCACGCAGTGGG--GCCTGTGCCTCACTCTAGGTGTCCTGTCGTGCG--GTGGAGGG--TAGCCTCCAAG--CAGACCACCATCCTG---GATGCGACCACTGCAGGTCATTTCACACTGGGATCCCTGTGGTCTTG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1344446 131 + 3144229 GCCAGGCACGCAGTGGG--GCCTGTGCCTCACTCTAGGTGTCCTGTCGTGTG--GTGCAGGG--TAGCCTCCAAG--CAGATCACCATCCTG---GATGCGACCACTGCAGGTCATTTCACACTGGGGTCCCTGTGGTCTTG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96623584 131 + 98384682 GCCAGGCACGCAGTGGG--GCCTGTGCCTCACTCTAGGTGTCTTGTCGTGCG--GTGGAGGG--TAGCCTCCAAG--CAGACCACCATCCTG---GATGGGACCACTGCAGGTCATTTCACACTGGGGTCCTTGTGGTCTTG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8166476 131 - 10857215 GCCAGGCACGCAGTGGG--GCCTGTGCCTCACTCTAGGTGTCCTGTCGTGCG--GTGGAGGG--TAGCCTCCAAG--CAGATCACCATCCTG---GATGCGACCACTGCAGGTCATTTCACACTGGGGTCCCTGTGGTCTTG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15562247 131 - 23502949 gccaggCACGCAGTGGG--GCCTGTGCCTCACTCTAGGTGTCCTGTGGTGCA--GTGGAGGG--TAGCCTCTGAG--CAGATCACCATCCTG---GATGCGACCACTGCAGGTCATTTCACACTGGGGTCCCTGTGGTCTTG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169831156 130 + 171630274 GCTGGACACGGAGTA-G--GGCTGTGCC-GGCTCTGGATGTCCCCGAGTGTGGTGTGGAGGG--CAGCCCCC-AG--CAGATGGCCATCCTT---GGCACGGCCACTGCAGGTCATTTCTCACGGGGGTCTCTGTGGTCTTG i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1205279 131 - 2164891 GCTGGACACGGAGCAGG--GGCTGTGCCGGGCTCTGGATGTCCCAGAGCGTGGTGTGGAGGG--CAGCCCCCGAG--CAGATGGCCCTCCTT---GGCACGGCCACT-CAGGTCATTTCACACTGGGATCTCTGTGGT-TTG i cebCap1.NW_016107695v1 C 0 C 0 s otoGar3.GL873575 10920128 140 - 12073884 GCCCAGCATGGGGAGAGCTCCCCTTGGCTCACTCCTGGGTGCCTGCTGTGCT--GTGGGGGGGCTGGCCTCAGGGCACAGATTACAGTCCTTGGAGATGCAGCCCTTGTAGGGCGTTTCACACACACTCCCCTGAGGTTGTG i otoGar3.GL873575 C 0 I 77 e saiBol1.JH378287 1251282 0 - 2905041 C e aotNan1.NW_018494782v1 1451216 3395 - 1813869 M e dasNov3.JH569188 492503 211 + 760995 I e canFam3.chr1 56136027 2466 + 122678785 I e nomLeu3.chr3 156251705 0 + 157873769 C a score=251538.000000 s hg38.chr6_KB021644v2_alt 26650 40 + 185823 CATTTCCTCTCCCATCTTTGAGCACATTATAAAAAGTTCT s panTro5.chr6 173493375 40 + 175400573 CATTTCCTCTCCCATCTTTGAGCACATTATAAAAAGTTCT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171743428 40 + 173848474 CATTTCCTCTCCCATCTTTGAGCACATTATAAAAAGTTCT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11430221 40 - 12463322 CATTTCCTCTCCCATCTTTGAGCACATTATAAAAAGTTCT i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170282068 40 + 172585720 CATTTCCTCTCCCATCTTTGAGCACATGTTAAAAAGTTAT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169027672 40 - 170955103 CATTTCCTCTCCCATCTTTGAGCACATGTTAAAAAGTTAT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8314930 40 + 10161646 CATTTCCTCTCCCATCTTTGAGCACATGTTAAAAAGTTAT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1344577 40 + 3144229 CATTTCCTCTCCCATCTTTGAGCACATGTTAAAAAGTTAT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96623715 40 + 98384682 CATTTCCTCTCCCATCTTTGAGCACATGTTAAAAAGTTAT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8166607 40 - 10857215 CATTTCCTTTCCCATCTTTGAGCACATGTTAAAAAGTTAT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15562378 40 - 23502949 CATTTCCTCTCCCATCTTTGACCACATGTTAAAACGTTAT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169831286 40 + 171630274 CATTTCTTCTCCCATCTTTTAGCACATTTTAAAAAGTTCT i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1205410 40 - 2164891 CATTTCTTCTCCCATCTTTTAGCACATTTAAAAAAGTTCT i cebCap1.NW_016107695v1 C 0 C 0 e otoGar3.GL873575 10920268 77 - 12073884 I e saiBol1.JH378287 1251282 0 - 2905041 C e aotNan1.NW_018494782v1 1451216 3395 - 1813869 M e dasNov3.JH569188 492503 211 + 760995 I e canFam3.chr1 56136027 2466 + 122678785 I e nomLeu3.chr3 156251705 0 + 157873769 C a score=20361.000000 s hg38.chr6_KB021644v2_alt 26690 4 + 185823 TTGT s panTro5.chr6 173493415 4 + 175400573 TTGT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171743468 4 + 173848474 TTGT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11430261 4 - 12463322 TTGT i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170282108 4 + 172585720 CTGT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169027712 4 - 170955103 CTGT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8314970 4 + 10161646 CTGT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1344617 4 + 3144229 CTGT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96623755 4 + 98384682 CTGT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8166647 4 - 10857215 CTGT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15562418 4 - 23502949 TTGT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169831326 4 + 171630274 TTGT i calJac3.chr4 C 0 C 0 e otoGar3.GL873575 10920268 77 - 12073884 I e saiBol1.JH378287 1251282 0 - 2905041 C e aotNan1.NW_018494782v1 1451216 3395 - 1813869 M e cebCap1.NW_016107695v1 1205450 0 - 2164891 C e dasNov3.JH569188 492503 211 + 760995 I e canFam3.chr1 56136027 2466 + 122678785 I e nomLeu3.chr3 156251705 0 + 157873769 C a score=1029072.000000 s hg38.chr6_KB021644v2_alt 26694 223 + 185823 Tggccgggcacagtggctcatgcctgtaatcccagaactttgggaggccaaggtgggtggatcatgaggtcaagcattcaaaaccagcctggccaacatagtgaaaccccgtctctact--aaaaaaacttaca----aaaaattagctgggcgtggtggtgggtgcctgtaatcccagctacttgagaggctgaggcaggagaatcacttgaacctgggaggtggagg s panTro5.chr6 173493419 223 + 175400573 Tggccaggcacagtggctcacgcctgtaatcccagaactttgggaggccaaggtgggtggatcatgaggtcaagcattcaaaaccagcctggccaacatagtgaaaccccgtctctact--aaaaaaacataca----aaaaattagctgggcgtggtggtgggtgcctgtaatcccagctacttgagaggctgaggcaggagaatcacttgaacctgggaggtggagg i panTro5.chr6 C 0 C 0 s panPan2.chr6 171743472 223 + 173848474 Tggccgggcacagtggctcacgcctgtaatcccagaactttgggaggccaaggtgggtggatcatgaggtcaagcattcaaaaccagcctggccaacatagtgaaaccccgtctctact--aaaaaaacataca----aaaaattagctgggcgtggtggtgggtgcctgtaatcccagctacttgagaggctgaggcaggagaatcacttgaacctgggaggtggagg i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11430265 223 - 12463322 Tggccgggcacagtggctcacgcctgtaatcccagaactttgggaggccaaggtgggtggatcatgaggtcaagcattcaaaaccagcctggccaacatagtgaaaccccgtctctact--aaaaaaacataca----aaaaattagctgggcgtggtggtgggtgcctgtaatcccagctacttgagaggctgaggcaggagaatcacttgaacctgggaggtggagg i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170282112 223 + 172585720 Tggccaggcacagtggctcacacctgtaatcccagcactttgggaggctgaagcgggtggatcacaaggtcaagcattcaagaccagcctggccaacatagcgaaatcccgtctctact--aaaaaaaaataca----aaaaattagctaggcatggttgtgggtgcctataatcccagctactcgggaagctgaggcaggagaatcacttgaacctgggaggtggagg i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169027716 223 - 170955103 Tggccaggcacagtggctcacacctgtaatcccagcactttgggaggctgaagcaggtggatcacaaggtcaagcattcaagaccagcctggccaacatagcgaaatcccgtctctact--aaaaaaaaataca----aaaaattagctaggcatggttgtgggcgcctataatcccagctactcgggaagctgaggcaggagaatcacttgaacctgggaggtggagg i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8314974 225 + 10161646 Tggccaggcacagtggctcacacctgtaatcccagcactttgggaggctgaagcgggtggatcacaaggtcaagcattcaagaccagcctggccaacatagcgaaatcccgtctctactaaaaaaaaaaataca----aaaaattagctaggcatggttgtgggcgcctataatcccagctactcgggaagctgaggcaggagaatcacttgaacctgggaggtggagg i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1344621 220 + 3144229 Tggccgggcacagtggctcacacctgtaatcccagcactttgggaggctgaagcgggtggatcacgaggtcaagcattcaagaccagcctggccaacataacgaaatcccatctctact--aaaaaaaaa---a----aaaaattagctaggcgtgattgtgggcacctgtaatcccagctactcgggaggctgaggcaggagaatcacttgagcctgggaagtggagg i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96623759 224 + 98384682 Tggccgggcacagtggctcacacctgtaatcccagcactttgggaggctgaagcggttggatcacgaggtcaagcattcaagaccagcctggccaacatagcaaaatcctgtctctact--aaaaaaaaagatac---aaaatttagctaggcatggttgtgggcacctgtaatcccagctactcgggaggctgaggcaggagaatcacttgaacctgggaggtggagg i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8166651 227 - 10857215 Tggccgggcacagtggctcacacctgtaatcccagcactttgggaggctgaagcgggtggatcacgaggtcaagcattcaagaccagcctggccaacataacgaaatcccatctctact--aaaaaaaaaaaaatacaaaaaattagctaggcgtgattgtgggcacctgtaatcccagctactcgggaggctgaggcaggagaatcacttgaacctgggaagtggagg i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15562422 225 - 23502949 Tggccaggcacagtggctctcacctgtaatcccagcactttgggaggctgaagcgggtggatcacaaggtcaagcattcaagaccagcctggccaacatagtgaaatcctgtctctactaaaaaaaaaaataca----aaaaattagctaggcgtggttgtgggcacctgtaatctcagctactcgggagactgaggcaggagaatcacttgaacctgggaagtggagg i colAng1.NW_012114488v1 C 0 C 0 e otoGar3.GL873575 10920268 77 - 12073884 I e saiBol1.JH378287 1251282 0 - 2905041 C e aotNan1.NW_018494782v1 1451216 3395 - 1813869 M e cebCap1.NW_016107695v1 1205450 0 - 2164891 C e calJac3.chr4 169831330 0 + 171630274 C e dasNov3.JH569188 492503 211 + 760995 I e canFam3.chr1 56136027 2466 + 122678785 I e nomLeu3.chr3 156251705 0 + 157873769 C a score=66955.000000 s hg38.chr6_KB021644v2_alt 26917 58 + 185823 ttgcagcgagccgtgattgcgccactgcactccagcccagatgacagtgcgagactct s panTro5.chr6 173493642 58 + 175400573 ttgcagcgagctgtgattgtgccactgcactccagcccagatgacagtgcgagactct i panTro5.chr6 C 0 C 0 s panPan2.chr6 171743695 58 + 173848474 ttgcagcgagctgtgattgtgccactgcactccagcccagatgacagtgcgagactct i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11430488 58 - 12463322 ttgcagcgagccgtgattgcgccactgcactccagcccagatgacagtgcgagactct i gorGor5.CYUI01015032v1 C 0 C 0 s cerAty1.NW_012002071v1 1344841 58 + 3144229 ttgcagtgagccaagatcacgccactgcactccagtctggatgataaagcaagactct i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96623983 58 + 98384682 ttgcagtgagccaagatcatgccactgcactccagtctggacgataaagtgagactct i chlSab2.chr13 C 0 C 0 e otoGar3.GL873575 10920268 77 - 12073884 I e saiBol1.JH378287 1251282 0 - 2905041 C e aotNan1.NW_018494782v1 1451216 3395 - 1813869 M e cebCap1.NW_016107695v1 1205450 0 - 2164891 C e calJac3.chr4 169831330 0 + 171630274 C e dasNov3.JH569188 492503 211 + 760995 I e colAng1.NW_012114488v1 15562647 0 - 23502949 C e canFam3.chr1 56136027 2466 + 122678785 I e nomLeu3.chr3 156251705 0 + 157873769 C e manLeu1.NW_012106474v1 8166878 0 - 10857215 C e macNem1.NW_012011000v1 8315199 0 + 10161646 C e rheMac8.chr4 170282335 0 + 172585720 C e macFas5.chr4 169027939 0 - 170955103 C a score=2292.000000 s hg38.chr6_KB021644v2_alt 26975 4 + 185823 gtct s panPan2.chr6 171743753 4 + 173848474 gtct i panPan2.chr6 C 0 C 0 s cerAty1.NW_012002071v1 1344899 4 + 3144229 gtct i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96624041 4 + 98384682 gtct i chlSab2.chr13 C 0 C 0 e otoGar3.GL873575 10920268 77 - 12073884 I e saiBol1.JH378287 1251282 0 - 2905041 C e aotNan1.NW_018494782v1 1451216 3395 - 1813869 M e cebCap1.NW_016107695v1 1205450 0 - 2164891 C e calJac3.chr4 169831330 0 + 171630274 C e dasNov3.JH569188 492503 211 + 760995 I e colAng1.NW_012114488v1 15562647 0 - 23502949 C e canFam3.chr1 56136027 2466 + 122678785 I e nomLeu3.chr3 156251705 0 + 157873769 C e manLeu1.NW_012106474v1 8166878 0 - 10857215 C e macNem1.NW_012011000v1 8315199 0 + 10161646 C e rheMac8.chr4 170282335 0 + 172585720 C e gorGor5.CYUI01015032v1 11430546 0 - 12463322 C e macFas5.chr4 169027939 0 - 170955103 C e panTro5.chr6 173493700 0 + 175400573 C a score=3878.000000 s hg38.chr6_KB021644v2_alt 26979 15 + 185823 caaaaaaaaaaaaaa s cerAty1.NW_012002071v1 1344903 15 + 3144229 caaaaaaaagaaaaa i cerAty1.NW_012002071v1 C 0 I 6 s chlSab2.chr13 96624045 15 + 98384682 caaaaaaaaaaaaaa i chlSab2.chr13 C 0 I 5 e otoGar3.GL873575 10920268 77 - 12073884 I e saiBol1.JH378287 1251282 0 - 2905041 C e aotNan1.NW_018494782v1 1451216 3395 - 1813869 M e cebCap1.NW_016107695v1 1205450 0 - 2164891 C e calJac3.chr4 169831330 0 + 171630274 C e dasNov3.JH569188 492503 211 + 760995 I e colAng1.NW_012114488v1 15562647 0 - 23502949 C e canFam3.chr1 56136027 2466 + 122678785 I e nomLeu3.chr3 156251705 0 + 157873769 C e manLeu1.NW_012106474v1 8166878 0 - 10857215 C e macNem1.NW_012011000v1 8315199 0 + 10161646 C e rheMac8.chr4 170282335 0 + 172585720 C e gorGor5.CYUI01015032v1 11430546 0 - 12463322 C e macFas5.chr4 169027939 0 - 170955103 C e panPan2.chr6 171743757 0 + 173848474 C e panTro5.chr6 173493700 0 + 175400573 C a score=0.000000 s hg38.chr6_KB021644v2_alt 26994 189 + 185823 ccagcactttgggaggccgaggcgggcggatcacgaggtcaggagatcgagaccatcccggctaaaacggtgaaaccccgtctctactaaaaaatacaaaaaattagccgggcgtagtggcgggcgcctgtggtcccagctacttgggaggctgaggcaggagaatggcgtgaacccgggaggcggagc e otoGar3.GL873575 10920268 77 - 12073884 I e saiBol1.JH378287 1251282 0 - 2905041 C e aotNan1.NW_018494782v1 1451216 3395 - 1813869 M e cebCap1.NW_016107695v1 1205450 0 - 2164891 C e calJac3.chr4 169831330 0 + 171630274 C e dasNov3.JH569188 492503 211 + 760995 I e colAng1.NW_012114488v1 15562647 0 - 23502949 C e canFam3.chr1 56136027 2466 + 122678785 I e chlSab2.chr13 96624060 5 + 98384682 I e cerAty1.NW_012002071v1 1344918 6 + 3144229 I e nomLeu3.chr3 156251705 0 + 157873769 C e manLeu1.NW_012106474v1 8166878 0 - 10857215 C e macNem1.NW_012011000v1 8315199 0 + 10161646 C e rheMac8.chr4 170282335 0 + 172585720 C e gorGor5.CYUI01015032v1 11430546 0 - 12463322 C e macFas5.chr4 169027939 0 - 170955103 C e panPan2.chr6 171743757 0 + 173848474 C e panTro5.chr6 173493700 0 + 175400573 C a score=76258.000000 s hg38.chr6_KB021644v2_alt 27183 58 + 185823 ttgcagtgagccgagatcccgccactgcactccagcctgggcgacagagcgagactcc s rheMac8.chr4 170282335 58 + 172585720 ttgcagtgagccaagatcacgccactgcactccagtctggacgataaagcaagactct i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169027939 58 - 170955103 ttgcagtgagccaagatcacgccactgcactccagtctggacgataaagcaagactct i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8315199 58 + 10161646 ttgcagtgagccaagatcacgccactgcactccagtctggacgataaagcaagactct i macNem1.NW_012011000v1 C 0 C 0 s manLeu1.NW_012106474v1 8166878 58 - 10857215 ttgcagtgagccaagatcacaccactgcactccagtctggacgataaagcaagactct i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15562647 58 - 23502949 ttgcagtgagccaagatcacgccactgcactccagtctggatgataaagcgagactct i colAng1.NW_012114488v1 C 0 C 0 e otoGar3.GL873575 10920268 77 - 12073884 I e saiBol1.JH378287 1251282 0 - 2905041 C e aotNan1.NW_018494782v1 1451216 3395 - 1813869 M e cebCap1.NW_016107695v1 1205450 0 - 2164891 C e calJac3.chr4 169831330 0 + 171630274 C e dasNov3.JH569188 492503 211 + 760995 I e canFam3.chr1 56136027 2466 + 122678785 I e chlSab2.chr13 96624060 5 + 98384682 I e cerAty1.NW_012002071v1 1344918 6 + 3144229 I e nomLeu3.chr3 156251705 0 + 157873769 C e gorGor5.CYUI01015032v1 11430546 0 - 12463322 C e panPan2.chr6 171743757 0 + 173848474 C e panTro5.chr6 173493700 0 + 175400573 C a score=47705.000000 s hg38.chr6_KB021644v2_alt 27241 21 + 185823 gtctcaaaaaaaaaaaaaaaa s panTro5.chr6 173493700 21 + 175400573 gtctcaaaaaaaaaaaaagaa i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11430546 21 - 12463322 gtctcaaaaaaaaaaaaaaaa i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170282393 21 + 172585720 gtctcaaaaaacaaaaagaaa i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169027997 21 - 170955103 gtctcaaaaaacaaaaagaaa i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8315257 21 + 10161646 gtctcaaaaaacaaaaagaaa i macNem1.NW_012011000v1 C 0 C 0 s manLeu1.NW_012106474v1 8166936 21 - 10857215 gtctcaaaaaaaagaaaaaaa i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15562705 21 - 23502949 gtctcaaaaaaaaaaaaaaaa i colAng1.NW_012114488v1 C 0 C 0 e otoGar3.GL873575 10920268 77 - 12073884 I e saiBol1.JH378287 1251282 0 - 2905041 C e aotNan1.NW_018494782v1 1451216 3395 - 1813869 M e cebCap1.NW_016107695v1 1205450 0 - 2164891 C e calJac3.chr4 169831330 0 + 171630274 C e dasNov3.JH569188 492503 211 + 760995 I e canFam3.chr1 56136027 2466 + 122678785 I e chlSab2.chr13 96624060 5 + 98384682 I e cerAty1.NW_012002071v1 1344918 6 + 3144229 I e nomLeu3.chr3 156251705 0 + 157873769 C e panPan2.chr6 171743757 0 + 173848474 C a score=1106.000000 s hg38.chr6_KB021644v2_alt 27262 20 + 185823 aaaaaaaaaaaaaaaaaaaa s panTro5.chr6 173493721 5 + 175400573 aaaaa--------------- i panTro5.chr6 C 0 C 0 s panPan2.chr6 171743757 20 + 173848474 acaaaaaaaaaaaaagaaaa i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11430567 14 - 12463322 ------aagaaagaaaaaaa i gorGor5.CYUI01015032v1 C 0 C 0 e otoGar3.GL873575 10920268 77 - 12073884 I e saiBol1.JH378287 1251282 0 - 2905041 C e aotNan1.NW_018494782v1 1451216 3395 - 1813869 M e cebCap1.NW_016107695v1 1205450 0 - 2164891 C e calJac3.chr4 169831330 0 + 171630274 C e dasNov3.JH569188 492503 211 + 760995 I e colAng1.NW_012114488v1 15562726 0 - 23502949 C e canFam3.chr1 56136027 2466 + 122678785 I e chlSab2.chr13 96624060 5 + 98384682 I e cerAty1.NW_012002071v1 1344918 6 + 3144229 I e nomLeu3.chr3 156251705 0 + 157873769 C e manLeu1.NW_012106474v1 8166957 0 - 10857215 C e macNem1.NW_012011000v1 8315278 0 + 10161646 C e rheMac8.chr4 170282414 0 + 172585720 C e macFas5.chr4 169028018 0 - 170955103 C a score=2246.000000 s hg38.chr6_KB021644v2_alt 27282 2 + 185823 aa s panPan2.chr6 171743777 2 + 173848474 aa i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11430581 2 - 12463322 AA i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170282414 1 + 172585720 -a i rheMac8.chr4 C 0 I 4 s macFas5.chr4 169028018 1 - 170955103 -a i macFas5.chr4 C 0 I 4 s macNem1.NW_012011000v1 8315278 1 + 10161646 -a i macNem1.NW_012011000v1 C 0 I 4 s manLeu1.NW_012106474v1 8166957 1 - 10857215 -G i manLeu1.NW_012106474v1 C 0 I 3 s colAng1.NW_012114488v1 15562726 1 - 23502949 -a i colAng1.NW_012114488v1 C 0 I 8 s otoGar3.GL873575 10920345 2 - 12073884 AA i otoGar3.GL873575 I 77 C 0 e saiBol1.JH378287 1251282 0 - 2905041 C e aotNan1.NW_018494782v1 1451216 3395 - 1813869 M e cebCap1.NW_016107695v1 1205450 0 - 2164891 C e calJac3.chr4 169831330 0 + 171630274 C e dasNov3.JH569188 492503 211 + 760995 I e canFam3.chr1 56136027 2466 + 122678785 I e chlSab2.chr13 96624060 5 + 98384682 I e cerAty1.NW_012002071v1 1344918 6 + 3144229 I e nomLeu3.chr3 156251705 0 + 157873769 C e panTro5.chr6 173493726 0 + 175400573 C a score=-1079.000000 s hg38.chr6_KB021644v2_alt 27284 1 + 185823 G s panTro5.chr6 173493726 1 + 175400573 G i panTro5.chr6 C 0 C 0 s panPan2.chr6 171743779 1 + 173848474 G i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11430583 1 - 12463322 G i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170282419 1 + 172585720 T i rheMac8.chr4 I 4 C 0 s macFas5.chr4 169028023 1 - 170955103 T i macFas5.chr4 I 4 C 0 s macNem1.NW_012011000v1 8315283 1 + 10161646 T i macNem1.NW_012011000v1 I 4 C 0 s cerAty1.NW_012002071v1 1344924 1 + 3144229 T i cerAty1.NW_012002071v1 I 6 C 0 s chlSab2.chr13 96624065 1 + 98384682 T i chlSab2.chr13 I 5 C 0 s manLeu1.NW_012106474v1 8166961 1 - 10857215 T i manLeu1.NW_012106474v1 I 3 C 0 s colAng1.NW_012114488v1 15562735 1 - 23502949 T i colAng1.NW_012114488v1 I 8 C 0 s otoGar3.GL873575 10920347 1 - 12073884 G i otoGar3.GL873575 C 0 I 1 e saiBol1.JH378287 1251282 0 - 2905041 C e aotNan1.NW_018494782v1 1451216 3395 - 1813869 M e cebCap1.NW_016107695v1 1205450 0 - 2164891 C e calJac3.chr4 169831330 0 + 171630274 C e dasNov3.JH569188 492503 211 + 760995 I e canFam3.chr1 56136027 2466 + 122678785 I e nomLeu3.chr3 156251705 0 + 157873769 C a score=5577.000000 s hg38.chr6_KB021644v2_alt 27285 3 + 185823 -TTG s panTro5.chr6 173493727 3 + 175400573 -TTG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171743780 3 + 173848474 -TTG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11430584 3 - 12463322 -TTG i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170282420 3 + 172585720 -TCA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169028024 3 - 170955103 -TCA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8315284 3 + 10161646 -TCA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1344925 3 + 3144229 -TTA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96624066 3 + 98384682 -TTA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8166962 3 - 10857215 -TTA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15562736 3 - 23502949 -TTA i colAng1.NW_012114488v1 C 0 C 0 s cebCap1.NW_016107695v1 1205450 3 - 2164891 -TTG i cebCap1.NW_016107695v1 C 0 C 0 s otoGar3.GL873575 10920349 3 - 12073884 -TCT i otoGar3.GL873575 I 1 C 0 s dasNov3.JH569188 492714 3 + 760995 TTC- i dasNov3.JH569188 I 211 C 0 e saiBol1.JH378287 1251282 0 - 2905041 C e aotNan1.NW_018494782v1 1451216 3395 - 1813869 M e calJac3.chr4 169831330 0 + 171630274 C e canFam3.chr1 56136027 2466 + 122678785 I e nomLeu3.chr3 156251705 0 + 157873769 C a score=20730.000000 s hg38.chr6_KB021644v2_alt 27288 3 + 185823 TCT s panTro5.chr6 173493730 3 + 175400573 TCT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171743783 3 + 173848474 TCT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11430587 3 - 12463322 TCT i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170282423 3 + 172585720 TCT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169028027 3 - 170955103 TCT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8315287 3 + 10161646 TCT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1344928 3 + 3144229 TCT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96624069 3 + 98384682 TCT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8166965 3 - 10857215 TCT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15562739 3 - 23502949 TCT i colAng1.NW_012114488v1 C 0 C 0 s cebCap1.NW_016107695v1 1205453 3 - 2164891 TCT i cebCap1.NW_016107695v1 C 0 C 0 s otoGar3.GL873575 10920352 2 - 12073884 TC- i otoGar3.GL873575 C 0 I 5 s canFam3.chr1 56138493 3 + 122678785 TCC i canFam3.chr1 I 2466 C 0 s dasNov3.JH569188 492717 3 + 760995 TCT i dasNov3.JH569188 C 0 C 0 e saiBol1.JH378287 1251282 0 - 2905041 C e aotNan1.NW_018494782v1 1451216 3395 - 1813869 M e calJac3.chr4 169831330 0 + 171630274 C e nomLeu3.chr3 156251705 0 + 157873769 C a score=752588.000000 s hg38.chr6_KB021644v2_alt 27291 100 + 185823 CTCTTGTATTTTCCA---CTATT---GAATAGAGTGTGCTTAGGATGAAAATGA----CAGAGAATGCGATTTTCATTTCTTGATCCGTCAATATTTTACTATGTGTCTG s panTro5.chr6 173493733 100 + 175400573 CTCTTGTATTTTCCA---CTATT---GAATAGAGTGTGCTTAGGATGAAAATGA----CAGATAATGCGATTTTTATTTCTTGATCCGTCAATATTTTACTATGTGTCTG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171743786 100 + 173848474 CTCTTGTATTTTCCA---CTATT---GAATAGAGTGTGCTTAGGATGAAAATGA----CAGATAATGTGATTTGTATTTCTTGATCCGTCAATATTTTACGATGTGTCTG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11430590 100 - 12463322 CTCTTGTATTTTCCA---CTATT---GAATAGAGTGTGCTTAGGATGAAAATGA----CAGAGAATGCGATTTTCATTTCTTGATCCGTCAATATTTTACTATGTGTCTG i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170282426 104 + 172585720 CTCTTGTATTTTCCA---CTATT---GAATAGAGTGTGCTTAGAATGAAAATGACAGTCAGAGAATATGATTTTTATTTCTTGATCCATCAATATTTTACTATGTGTCTG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169028030 104 - 170955103 CTCTTGTATTTTCCA---CTATT---GAATAGAGTGTGCTTAGAATGAAAATGACAGTCAGAGAATATGATTTTTATTTCTTGATCCATCAATATTTTACTATGTGTCTG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8315290 104 + 10161646 CTCTTGTATTTTCCA---CTATT---GAATAGAGTGTGCTTAGAATGAAAATGACAGTCAGAGAATATGATTTTTATTTCTTGATCCATCAATATTTTACTATGTGTCTG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1344931 104 + 3144229 CTTTTGTATTTTCCA---CTACT---GAATAGAGTGTACTTAGAATGAAAATGACAGTCAGATAATATGATTTTTATTTCTTGATCCGTCAATATTTTACTATGTGTCTG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96624072 104 + 98384682 CTTTTGTATTTTCCA---CTATT---GAATAGAGTGTGCTTGGAATGAAAATGACTGTCAGATAATACGATTTTTATTTCTTGATCCGTCAATATTTTACTATGTGTCTG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8166968 104 - 10857215 CTTTTGTATTTTCCA---CTACT---GAATAGAGTGTACTTAGAATGAAAATGACAGTCAGATAATATGATTTTTATTTCTTGATCCGTCAATATTTTACTATGTGTCTG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15562742 104 - 23502949 CTCTTGTATTTTCCA---CTATT---GAATAGAGTGTGCTTAGAGTGAAAATTACAGTCAGGTAATACGATTTTTATTTCTTGATCCGTCAATATTTTACTATGTGTCTG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169831330 104 + 171630274 CTCTTGTATTTCCCA---GTATT---GAACAGAGTGTGCTTAGGATGAAAATGACAGTCAGATAATATGAGTTTTAATTCTCAATCTGTCAGTATTTTACTATGTGTCTG i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1205456 104 - 2164891 CTCTTGTATTTTCCA---GTATT---GAATAGAGTGTGTTTAGAATGAAAATGACAGTCAGATAATATGATTTTTATTTCTCAATCTGTCAATATTTTACTATGTATCTG i cebCap1.NW_016107695v1 C 0 C 0 s otoGar3.GL873575 10920359 105 - 12073884 TCCTTACACTTTTTA---ATAATGTGGAATAGCGTGTGCTCAGGAGGAGAGAAACAGGGAGAGAGTGGGATTTGTGTACCTTCACCTGTCAATATTTCAC--TGTCTCTG i otoGar3.GL873575 I 5 C 0 s canFam3.chr1 56138496 86 + 122678785 TTCTTGTGTTTCCCG---GTTGT---G------------CTCGGAGGACAGCAGCAGACAG--AAGGTGACTCCTGTCC----GTCTTCCAGCTCTGGGCTCTGGCTCTG i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 492720 107 + 760995 CTCCTACAGTTTCTGATTATATT---GAATATGGCGAGCTCAGGAAGAGAGCAATAGCCAGAGAATATGATTTCTCTTCCTTGATCCATCAATATTTTTCTATGTTTCTG i dasNov3.JH569188 C 0 C 0 e saiBol1.JH378287 1251282 0 - 2905041 C e aotNan1.NW_018494782v1 1451216 3395 - 1813869 M e nomLeu3.chr3 156251705 0 + 157873769 C a score=509834.000000 s hg38.chr6_KB021644v2_alt 27391 74 + 185823 GGATGAAGCACTAATTACCTTAAAACTGTAATTAACTTGTCAAATGTCTTTCCTCCAAGAATCCTGCAAAGGTC s panTro5.chr6 173493833 74 + 175400573 GGATGAAGCACTAATTACCTTAAACCTGTAATTAACTTGTCAAATGTCTTTCCTCCAAGAATCCTGCAAAGGTC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171743886 74 + 173848474 GGATGAAGCACTAATTACCTTAAACCTGTAATTAACTTGTCAAATGTCTTTCCTCCAAGAATCCTGCAAAGGTC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11430690 74 - 12463322 GGATGAAGCACTAATTACCTTAAACCTGTAATTAACTTGTCAAATGTCTTTCCTCCAAGAATGCTGCAAAGGTC i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170282530 74 + 172585720 GGATGAAGCACTAATCACCTTAAACTGGTAACTAACTTGTCAAACATCTTTCCTCCAAGAATCCTGCAAAGGTC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169028134 74 - 170955103 GGATGAAGCACTAATCACCTTAAACTGGTAACTAACTTGTCAAACATCTTTCCTCCAAGAATCCTGCAAAGGTC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8315394 74 + 10161646 GGATGAAGCACTAATCACCTTAAACTGGTAACTAACTTGTCAAACATCTTTCCTCCAAGAATCCTGCAAAGGTC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1345035 74 + 3144229 GGATGAAGCACTAATCACCTCAAACTGGTAACTAACTTGTCAAACGTCTTTCCTCCAAGAATCCTGCAAAGGTC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96624176 74 + 98384682 GGATGAAGCACTAATCACCTCAAACTGGTAACTAACTTGTCAAACGTCTTTCCTCCAAGAATCCTGCAAAGGTC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8167072 74 - 10857215 GGATGAAGCACTAATCACCTCAAACTGGCAACTAACTTGTCAAACGTCTTTCCTCCAAGAATCCTGCAAAGGTC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15562846 74 - 23502949 GGATGAAGCACTAATCACCTTAAACTGGTAACTAACTTGTCAAACATTTTTCCTCCAAGAATCCTGCAAAGGTC i colAng1.NW_012114488v1 C 0 C 0 s cebCap1.NW_016107695v1 1205560 68 - 2164891 GGACAAAGTACTCATTACCTTAAACCTGTAATTAACTTGTCAAGTGTTTTTCCCCCAGGAATCCTGCA------ i cebCap1.NW_016107695v1 C 0 C 0 s otoGar3.GL873575 10920464 71 - 12073884 ---GGAAGCACTAGTGACTTTAAACCTGCAATTAAGTTGCCAACTATCTCTCCTGCAGGGAACTAGCAAAGGTA i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56138582 68 + 122678785 TGAAGTAGCCCTGGCTGCTTTGCATCTGCAGTGACCCCCTCAGATAACGTTCCTTCAAGAATCTCGCA------ i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 492827 74 + 760995 AAAAGAAGCACCGATTCCCTTAAACCTGTAATTGACTTGTCATATATCTTTTCCCCAAGAATCTTGCAAGGATC i dasNov3.JH569188 C 0 I 251 e saiBol1.JH378287 1251282 0 - 2905041 C e aotNan1.NW_018494782v1 1451216 3395 - 1813869 M e calJac3.chr4 169831434 0 + 171630274 C e nomLeu3.chr3 156251705 0 + 157873769 C a score=267532.000000 s hg38.chr6_KB021644v2_alt 27465 54 + 185823 --------TTAAA------------------GGTCTT--------------AAAGGGTGAGTAAGTAATAGTCTGTGATATAATTTAAAAGGAA s panTro5.chr6 173493907 54 + 175400573 --------TTAAA------------------GGTCTT--------------AAAGGGTGAGTAAGTAATAGTCTGTGATATAATTTAAAAGGAA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171743960 54 + 173848474 --------TTAAA------------------GGTCTT--------------AAAGGGTGAGTAAGTAATAGTCTGTGATATAATTTAAAAGGAA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11430764 54 - 12463322 --------TTAAA------------------GGTCTT--------------AAAGGGTGAGTAAGTAATAGTCTGTGATATAATTTAAAAGGAA i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170282604 54 + 172585720 --------CTAAA------------------GGTCTT--------------AAAGAGTGAATAAGTAATAGTCTGTAAAATAATTTAAAAGGAA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169028208 54 - 170955103 --------CTAAA------------------GGTCTT--------------AAAGAGTGAATAAGTAATAGTCTGTAAAATAATTTAAAAGGAA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8315468 54 + 10161646 --------CTAAA------------------GGTCTT--------------AAAGAGTGAATAAGTAATAGTCTGTAAAATAATTTAAAAGGAA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1345109 54 + 3144229 --------CTAAA------------------GGTCTT--------------AAAGAGTGAATAACTAATAGTCTGTAAAATAATTTAAAAGGAA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96624250 54 + 98384682 --------CTTAA------------------GGTCTT--------------AAAGAGTGAATAAGTAATAGTCTGTAATATAATTTAAAAGGAA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8167146 54 - 10857215 --------CTAAA------------------GGTCTT--------------AAAGAGTGAATAACTAATAGTCTGTAAAATAATTTAAAAGGAA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15562920 54 - 23502949 --------TTAAA------------------GGTCTT--------------AAAGAGTGAATAAGTAATAGTCTGTAATATAATTTAAAAGGAA i colAng1.NW_012114488v1 C 0 C 0 s cebCap1.NW_016107695v1 1205628 51 - 2164891 -----------AA------------------AGTCTT--------------AAAGGGTGGGTAAGTAATAATCCCTGATACAATTTAAAAGGAA i cebCap1.NW_016107695v1 C 0 C 0 s otoGar3.GL873575 10920535 29 - 12073884 --------TTA-------------------------------------------------------GATGGGCTGTGCTGTGACTCCGGCAG-- i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56138650 29 + 122678785 -----------GA------------------GGTTTT--------------ATAGGGTGAATATGCAATGGT---------------------- i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 493152 94 + 760995 ttaaaaaaTTAAAAAAAAAAGATCAGCAAGGGGTCTCATCCATAAAAATAAAAAGGATGGATAAACAATAGTTTGCGATAGAGCTTAAAAAGAA i dasNov3.JH569188 I 251 C 0 e saiBol1.JH378287 1251282 0 - 2905041 C e aotNan1.NW_018494782v1 1451216 3395 - 1813869 M e calJac3.chr4 169831434 0 + 171630274 C e nomLeu3.chr3 156251705 0 + 157873769 C a score=2158436.000000 s hg38.chr6_KB021644v2_alt 27519 326 + 185823 GGCCACAAACCACTTTTTCTGTTTTTCTTTGATTTCATGGAATAGTCTTCATTCTTTTCTCCTGTCCTCCTATTTGGATACATGTGGCTGCC-GTGAGCCT---CTAGACGC--CCT--CCCCCACTTCCAGCACTTGGCTGA--CGG------ATTTGCTGGTCT---GTGACCCCTGCCAGAGGCCTGAAAATCTTCGCAGTTTATGCAAAGCCAAGAGAGGCTGCGTGCAAGGCAGCTGAGGGGAGCCCTCCAA-----TACGCC---------AGCATAGGATTT----------------G-GAGCTTTGGAA--GGTC----AGTGGGGCT-AAGTCCTTTTCAAGCAAGACAAAGCTGAGGAAAC-ACA-GGCTCAGG- s panTro5.chr6 173493961 326 + 175400573 GGCCACAAACCACTTTTTCTGTTTTTCTTTGATTTCATGGAATAGTCTTCATTCTTTTCTCCTGTCCTCCTATTTGGATACATGTGGCTGCC-GTGAGCCT---CTAGACGC--CCT--CCCCCACTTCCAGCACTTGGCTGA--CGG------ATTTGCTGGTCT---GTGACCCCTGCCAGAGGCCTGAAAATCTTTGCAGTTTATGCAAAGCCAAGAGAGGCTGTGTGCAAGGCAGCTGAGGGGGGCCCTCCAA-----TACGCC---------AGCATAGGATTT----------------G-GAGCTTTGGAA--GGTC----AGTGGGGCT-AAGTCCTTTTCAAGCAAGACAAAGCTGAGGAAAC-ACA-GGCTCAGG- i panTro5.chr6 C 0 C 0 s panPan2.chr6 171744014 326 + 173848474 GGCCACAAACCACTTTTTCTGTTTTTCTTTGATTTCATGGAATAGTCTTCATTCTTTTCTCCTGTCCTCCTATTTGGATACATGTGGCTGCC-GTGAGCCT---CTAGACGC--CCT--CCCCCACTTCCAGCACTTGGCTGA--CGG------ATTTGCTGGTCT---GTGACCCCTGCCAGAGGCCTGAAAATCTTTGCAGTTTATGCAAAGCCAAGAGAGGCTGTGTGCAAGGCAGCTGAGGGGGGCCCTCCAA-----TACGCC---------AGCATAGGATTT----------------G-GAGCTTTGGAA--GGTC----AGTGGGGCT-AAGTCCTTTTCAAGCAAGACAAAGCTGAGGAAAC-ACA-GGCTCAGG- i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11430818 325 - 12463322 GGCCACAAACCACTTTTCCTGCTTTTCTTTGATTTCATGGAATAGTCTTCATTCTTTTCTCCTGTCCTCCTATTTGGATACATGTGGCTGCC-GTGAGCCT---CTAGACGC--CCT---CCCCACTTCCAGCACTTGGCTGA--TGG------ATTTGCTGGTCT---GTGACCCCTGCCAGAGGCCTGAAAATCTTCGCAGTTTATGCACAGCCAAGAGAGGCTGTGTGCAAGGCAGCCGAGGGGAGCCCTCCAA-----TACGCC---------AGCATAGGATTT----------------G-GAGCTTTGGAA--GGTC----AGTGGGGCT-AAGTCCTTTTCAAGCAAGACAAAGCTGAGGAAAC-ACA-GGCTCAGG- i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170282658 325 + 172585720 GGCCACAAACCACTTTTTCTGTTTTTCTTTGATTTCATGGAAGAGTCTTCATTCTTTTCTCCTGTCCTCCTATTTGGATACATGTAGCTACC-ATGAGCCT---CCAGACAC--CCT--CCCCCACTTCCGGCACTTGGTTGA--CAG------ATTTTCTGGTCT---GTGACCCCTGTCAGAGGTCTGAAAATCTTAGCAGTTTATGCAAAGCTGAGAGAGGCTCTGTGCAAGGCAGCTGAGGAGAGCCCTCCAA-----TACGCC---------AGCATAGGATTT----------------G-GAGCTTTGGAA--GGTC----AGTGAGGCT-AAGTCCTTTTCAAGCAAGAC-AGGCTGAGAAAAT-ACA-GGCTCAGG- i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169028262 325 - 170955103 GGCCACAAACCACTTTTTCTGTTTTTCTTTGATTTCATGGAAGAGTCTTCATTCTTTTCTCCTGTCCTCCTATTTGGATACATGTAGCTACC-ATGAGCCT---CCAGACAC--CCT--CCCCCACTTCCGGCACTTGGTTGA--CAG------ATTTTCTGGTCT---GTGACCCCTGTCAGAGGTCTGAAAATCTTAGCAGTTTATGCAAAGCTGAGAGAGGCTCTGTGCAAGGCAGCTGAGGAGAGCCCTCCAA-----TACGCC---------AGCATAGGATTT----------------G-GAGCTTTGGAA--GGTC----AGTGAGGCT-AAGTCCTTTTCAAGCAAGAC-AGGCTGAGAAAAT-ACA-GGCTCAGG- i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8315522 325 + 10161646 GGCCACAAACCACGTTTTCTGTTTTTCTTTGATTTCATGGAAGAGTCTTCATTCTTTTCTCCTGTCCTCCTATTTGGATACATGTAGCTACC-ATGAGCCT---CCAGACAC--CCT--CCCCCACTTCCGGCACTTGGTTGA--CAG------ATTTTCTGGTCT---GTGACCCCTGTCAGAGGTCTGAAAATCTTAGCAGTTTATGCAAAGCTGAGAGAGGCTCTGTGCAAGGCAGCTGAGGAGAGCCCTCCAA-----TACGCC---------AGCATAGGATTT----------------G-GAGCTTTGGAA--GGTC----AGTGAGGCT-AAGTCCTTTTCAAGCAAGAC-AGGCTGAGAAAAT-ACA-GGCTCAGG- i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1345163 326 + 3144229 GGCCACAAACCACTTTTTCTGTTTTTCTTTGATTTCATGGAAGAGTCTTCATTCTTTTCTCCTGTCCTCCTATTTGGATACATGTAGCTACC-ATGAGCCT---CCAGACAC--CCT--CCCCCACTTCCGGCACTTAGTTGA--CAG------ATTTTCTGGTCT---GTGACCCCTGTCAGAGGTCTGAAAATCTTAGCAGTTTATGCAAAGCCAAGAGAGGTTTTGTGCAAGGCAGCTGAGGAGAGCCCTCTAA-----TACGCC---------AGCATAGGATTT----------------G-GCGCTTTGGAA--GGTC----AGTGAGGCT-AAGTCCTTTTCAAGCAAGACAAGGCTGAGGAAAT-ACA-GGCTCAGG- i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96624304 326 + 98384682 GGCCACAAACCACTTCTTCTGTTTTTCTTTGATTTCATGGAAGAGTCTTCATTCTTTTCTCCTGTCCTCCTATTTGGATACATGTAGCTACC-ATGAGCCT---CTAGACAC--CCT--CCCCCACTTCCGGCACTTGGTTGA--CAG------ATTTGCTGGTCT---GTGACCCCTGTCAGAGGTCTGAAAATCTTAGCAGTTTATGCAAAGCCAAGAGAGGCTCTGTGCAAGGCATCTGAGGAGAGCCCTCCAA-----TACGCC---------AGCGTAGAATTT----------------G-GAGCTTTGGAA--GGTC----AGTGAGGCT-AAATCCTTTTCAAGCAAGACAAGGCTGAGGAAAC-ACA-GGCTCAGG- i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8167200 326 - 10857215 GGCCACAAACCACTTTTTCTGTTTTTCTTTGATTTCATGGAAGAGTCTTCATTCTTTTCTCCTGTCCTCCTATTTGGATACATGTAGCTACC-ATGAGCCT---CCAGACAC--CCT--CCCCCACTTCCGGCACTTAGTTGA--CAG------ATTTTCTGGTCT---GTGACCCCTGTCAGAGGTCTGAAAATCTTAGCAGTTTATGCAAAGCCAAGAGAGGTTTTGTGCAAGGCAGCTGAGGAGAGCCCTCCAA-----TACGCC---------AGCATAGGATTT----------------G-GAGCTTTGGAA--GGTC----AGTGAGGCT-AAGTCCTTTTCAAGCAAGACAAGGCTGAGGAAAT-ACA-GGCTCAGG- i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15562974 326 - 23502949 GGTCACAAACCACTTTTTCTGTTTTTCTTTGATTTCATGGAAGAGTCTTCATTCTTTTCTCCTGTCCTCCTATTTGGATATATGTAGCTGCC-ATGTGCCT---CCAGACAC--CCT--TCCACACTTCCAGCACTTGGCTGA--CAG------ATTTGCTGGTCT---GTGACCCCTGCCAGAGGTCTGAAAATCTTAGCAGTTTATGCAAAGCCAGGAGAGGCTCTGTGCAAGGCAGCTGAGGAGAGTCCTCCAA-----TACGCC---------AGCATAGGATTT----------------G-GAGCTTTGGAA--GGTC----AGCAGGGCT-AAGTCCTTTTCAAGCAAGACAAGGCTGAGGAAAC-ACA-GGCTCAGG- i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169831434 326 + 171630274 GGCCACAAAGCCCTTTTTCTGCTTTTCTCTGATTTCATGCGGTAGCCTTCATTCTTTCCTCCTGTCCTTTCATTTGCTTACATGGGGCTGCC-ATGAGCCG---GCAGGCAC--CCT--CCCCCACTCCCAGCACGTGGCTGACTCGG-------TTTGCTGGTCT---GTGACCCCCGTCAGAGGTCTGGAAATCTGGGCGGCTTATGCAGAGCCAGGACAGGCTGTGTGCGAGTAAGCCCGGGAGAGGCCCCCAG-----GGCGCC---------AGCACAGGATTT----------------G-GAATGGTGA-G--GGTC----AGAGGGGCT-AAGCGCTTTTCAAGCAAGACAAGGCTGAGGAAAC-ACA-GGCGCAGG- i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1205679 326 - 2164891 GGCCACGAACCCCGTTTTCTGCTTTTCTTTGATTTCATGGTGTAGCCTTCATTCTTTCCTCCTGTCCTTTCCTTTGCATACCCGCGGCTG-C-ATGAGCCT---TCAGACAC--CCT--CCCCCACTCCCAGCATGTGGCTGACTCGG------ACTTGCTGGTCT---GTGACCCCCGTCAGAGGTCTGGAAATCTTGGCAGCTTATGCAGAGCCAAGACAGGCTGTGTGCAAGTAAGCCTAGGAGAGCCCTCCAG-----CATGCC---------AGCGCAGGATTT----------------G-GAGCTTTGG-A--GGTC----AGAGGGGCT-AAGCGCTTTTCAAGCAAGACAAGGCTGAGGAAAC-ACA-GGCTCAGG- i cebCap1.NW_016107695v1 C 0 C 0 s otoGar3.GL873575 10920564 226 - 12073884 -------------------------------------TGATAGGGC-------CCTGCCTCAGGCCCTCCCCTTTGGATGGATCTGGTAGCT-GAGAGTCT---GCAGCCCC--CATGGCCCTCACGCTGGGCA---GGCCG---CAG----------------------------------------CAAACATCGCAG-GGTCTGTGCCAAGCCACGGCGGG-TGTGAGCAAGGCAGCTGCGAAGGGCCCAACAG-----TGT----------------CAGAACCT----------------C-AGCCTCCAG------------AGGAGGGCT---GTCCCTTTCAGG------ATAGCTGAGGGAGG-GAA-GGCCCAGG- i otoGar3.GL873575 C 0 I 1072 s canFam3.chr1 56138679 285 + 122678785 -------------TCCATCCGTTTCTCT-------------------------GTTTTCTCGTGTCCT---GTTTGGATACCTCGGGTGACCTGCGGGACT---GCAGACTCTGCTC--TCTTGCCCTCCAGCACTTGGCCAC--CGG----------------CT---GTAGTTCCTTCCAG-GGTCTGGAAATCTTGGCTGTTTCTGTGACCCCAGGATAAGCCACGTGTAAGGAAGCAGAAAACAGT-CTCCA-----------C---------ATCGTGGATCTTGTTAGAGTCCGTAGTGG-AGGCTTCAGGATTTGAC----AAAAGACCT-AAGTCCCTCTTGGG----ACAAGGCAGAGGAAAT-GCAGGGCCCCGG- i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 493246 357 + 760995 GTTTGCAAATAACTTTTTCTGTTTTTCTCCAGTTTAATTGGAGAAATTTAGTCCTTTTCTCTTGTGCTCATATTTGGATATATTTGGTTGAT-GCAGGCGTTTCTCAGATTC--CTC--CCTTGTCTTCTGGCACTTGGCTGG--CAGGAAAGCACTGGCTGAGCTTAAATGATCCATATCAGGGTTCTGGAAGTCTTGGCAGTTTATTCAAAGACAAGACAAACTGCGCATCAAGCAGCAGAGAACAGTCCTCCGAAATTGTATATCTTGGATCAGAGTGTATGAGTT----------------GAAAGCCTCAAAA--TGTCAGATAGAGGGGCTCAAATCATTTCCAGG---ATCAAGACTGAGGGGATAACA-GACTTTAGG i dasNov3.JH569188 C 0 C 0 e saiBol1.JH378287 1251282 0 - 2905041 C e aotNan1.NW_018494782v1 1451216 3395 - 1813869 M e nomLeu3.chr3 156251705 0 + 157873769 C a score=184513.000000 s hg38.chr6_KB021644v2_alt 27845 29 + 185823 CCCAACGTCCACAAGTACACATTGCTCCA-- s panTro5.chr6 173494287 29 + 175400573 CCCAACGTCCACAAGTACACGTTGCTCCA-- i panTro5.chr6 C 0 C 0 s panPan2.chr6 171744340 29 + 173848474 CCCAACGTCCACAAGTACACGTTGCTCCA-- i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11431143 29 - 12463322 CCCAACGTCCACAAGTACACGTTGCTCCA-- i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170282983 29 + 172585720 CCCAACGTCCACAAGTCCATGTAGCTCCA-- i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169028587 29 - 170955103 CCCAACGTCCACAAGTCCATGTAGCTCCA-- i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8315847 29 + 10161646 CCCAACGTCCAGAAGTCCATGTAGCTCCA-- i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1345489 29 + 3144229 CCCAACGTCCACAGGTCCACGTAGCTCCA-- i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96624630 29 + 98384682 CCCAACGTCCACAAGTCCATGTAGCTCCA-- i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8167526 29 - 10857215 CCCAACGTCCACAGGTCCATGTAGCTCCA-- i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15563300 29 - 23502949 CCCAACGTCCACAAGTACATGTAGCTCCA-- i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169831760 29 + 171630274 CCCAATGTCCAGAAGTACACGTAGCTCCG-- i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1206005 29 - 2164891 CCCAACGTCCAGAAGTACACGTAGCTCCC-- i cebCap1.NW_016107695v1 C 0 C 0 s canFam3.chr1 56138964 26 + 122678785 CCCCACTTGCTAAG---CACGCAGCTCCA-- i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 493603 29 + 760995 CTCAATATCCC--AGCGTACTGAGCTTCACT i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10920790 1072 - 12073884 I e saiBol1.JH378287 1251282 0 - 2905041 C e aotNan1.NW_018494782v1 1451216 3395 - 1813869 M e nomLeu3.chr3 156251705 0 + 157873769 C a score=333484.000000 s hg38.chr6_KB021644v2_alt 27874 45 + 185823 GAGAGGAGCTGGAGTTCT---GGGACCGGCATTTAGTGGAGGACACCC-- s panTro5.chr6 173494316 45 + 175400573 GAGAGGAGCTGGAGTTCT---GGGACCGGCATTTAGTGGAGGAGACCC-- i panTro5.chr6 C 0 C 0 s panPan2.chr6 171744369 45 + 173848474 GAGAGGAGCTGGAGTTCT---GGGACCGGCATTTAGTGGAGGAGACCC-- i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11431172 44 - 12463322 GAGAGGAGCTGGAGTTCT---GGGACCGGCATTTAGTGGAGGACA-CC-- i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170283012 45 + 172585720 GAGAGGAGCTGGAGTTCT---GGGACTGGCATTTAGTGGAGGACACCC-- i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169028616 45 - 170955103 GAGAGGAGCTGGAGTTCT---GGGACTGGCATTTAGTGGAGGACACCC-- i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8315876 45 + 10161646 GAGAGGAGCTGGAGTTCT---GGGACTGGCATTTAGTGGAGGACACCC-- i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1345518 45 + 3144229 AAGAGGAGCTGGAGTTCT---GGGACTGGCATTTAGTGGAGGACACCC-- i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96624659 45 + 98384682 GAGAGGAGCTGGCGTTCT---GGGACTGGCATTTAGTGGAGGACACCC-- i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8167555 45 - 10857215 GAGAGGAGCTGGAGTTCT---GGGACTGGCATTTAGTGGAGGACACCC-- i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15563329 45 - 23502949 GAGAGGAGCTGGAGTTCT---GGGACTGGCATTTAGTGGAGGACACCC-- i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169831789 42 + 171630274 -TTGG-AGCTGGAGTTCT---GGGACTTGTGTTTACTGGAGGACA-CC-- i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1206034 44 - 2164891 -AGGGAAGCTGGAGTTCT---GGGACTTTCGTTTAATGGAGGACACCC-- i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1454657 45 - 1813869 GAGAGGGGCTGGAGTTGT---GGGACTTGCGTTTAATGGAGGACACCC-- i aotNan1.NW_018494782v1 M 3395 C 0 s canFam3.chr1 56138990 45 + 122678785 GCAGGAAGGCTCAGAACC---CGGATCTGCATTCAGTGCCGAATGCCC-- i canFam3.chr1 C 0 I 807 s dasNov3.JH569188 493632 50 + 760995 TAGGGGAGATAGAGAACCCTGGAGATCTGGATATAACGTAGGATGCCCAC i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10920790 1072 - 12073884 I e saiBol1.JH378287 1251282 0 - 2905041 C e nomLeu3.chr3 156251705 0 + 157873769 C a score=499040.000000 s hg38.chr6_KB021644v2_alt 27919 67 + 185823 CAGAGCCCACGAGGAGGGAACTGGAGGGAGAATTCAGCCAGTGCTAGCCATAACATCACTCAGCC-AC s panTro5.chr6 173494361 68 + 175400573 CAGAGCCCACGAGGAGGGAGCTGGATGGAGAATTCAGCCAGTGCTAGCCACAGCATCACTCAGCCCAC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171744414 68 + 173848474 CAGAGCCCACGAGGAGGGAGCTGGATGGAGAATTCAGCCAGTGCTAGCCACAGCATCACTCAGCCCAC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11431216 68 - 12463322 CAGAGCCCACGACGAGGGAGCTGGATGGAGAATTCAGCCAGTGCTAGCCACAGCATCACTCAGCCCAC i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170283057 68 + 172585720 CAGAGCCCACGAGGAGGGAGCTGGATGGAGAATTCAGCCAGTGCTAGCCACAGCATCACTCAGCCCAC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169028661 68 - 170955103 CAGAGCCCACGAGGAGGGAGCTGGATGGAGAATTCAGCCAGTGCTAGCCACAGCATCACTCAGCCCAC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8315921 68 + 10161646 CAGAGCCCACGAGGAGGGAGCTGGATGGAGAATTCAGCCAATGCTAGCCACAGCATCACTCAGCCCAC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1345563 68 + 3144229 CAGAGCCCAGGAGGAGGGAGCTGGATGGAGAATTCAGCCGGTGCTAGCCACAGCCTCACTCAGCCCAC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96624704 68 + 98384682 CAGAGCCCATGAGGAGGGAGCTGGATGGAAAATTCAGCCAGTGCTAGCCACAGCATCGCTCAGCCCAC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8167600 68 - 10857215 CAGAGCCCATGAGGAGGGAGCTGGATGGAGAATTCAGCCAGTGCTAGCCACAGCCTCACTCAGCCCAC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15563374 68 - 23502949 CAGAGCCCACGAGGAGGGAGCTGGATGGAGGATTCAGCCAGTGCTAGCCACAGCATCACTCAGCCCAC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169831831 58 + 171630274 CAGAGCCCACGAGGAGGGAGCTGGACGGAGAATTCAGCCAGTG----------CATCGCTCAGCCCAC i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1206078 58 - 2164891 CAGAGCCCACGAGGAAAGAGCTGGACGGAGAATTCAGCCAGTG----------CATCGCTCAGCGCAC i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1454702 58 - 1813869 CAGAGCCCACGAGGAGGGAGCTGGACGGAGAATTCAGCCAGTG----------CATCTCTCAGCCCAC i aotNan1.NW_018494782v1 C 0 C 0 s dasNov3.JH569188 493682 64 + 760995 AAGGATCAGTGAGAGAAGAGTTGGAATGAAATTTCAGCAAGCATTATCATCAGCATTCATCTAC---- i dasNov3.JH569188 C 0 I 42 e otoGar3.GL873575 10920790 1072 - 12073884 I e saiBol1.JH378287 1251282 0 - 2905041 C e canFam3.chr1 56139035 807 + 122678785 I e nomLeu3.chr3 156251705 0 + 157873769 C a score=2587071.000000 s hg38.chr6_KB021644v2_alt 27986 361 + 185823 AGTGAGCCATGGCTGGGCCTGCCCCTGTGAGGCACAGACACCTTGCTtttttttt-gttttgctttgctttgttttttgagacggagtctcactctcttgcccaggctggagtgcaatggtgccatctcagctcactgcagcctctgctccccagattcaagcgattctcccacctcagcctctcaagtagctgggattacaggcacctgccacaatgcctgtctaatttttgtattgttagtagagatggggtttcaccatgttgaccaggctggtctcgaactcctgacctcag----------------gtgatctgcccaccttggcttcccaaagtgctgggattacaggcatgagccactgtgccctgccCA s panTro5.chr6 173494429 362 + 175400573 AGTGAGCCATGGCTGGGCCTGCCCCTGTGAGGCACAGACACCTTGCttttttttttcttttgctttgctttgttttctgagacggagtctctctctcttgcccaggctggagtgcaatggtgccatctcagctcactgcagcctctgctccccagattcaagcgattctcccacctcagcctctcaagtagctgggattacaggcacctgccacaatgcctggctaatttttgtattgttagtagagatggggtttcaccatgttgaccaggctggtctcgaactcctgacctcag----------------gtgatctgcccaccttggcttcccaaagtgctgggattacaggcatgagccactgtgccctgccCA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171744482 360 + 173848474 AGTGAGCCATGGCTGGGCCTGCCCCTGTGAGGCACAGACACCTTGCtttttttt--cttttgctttgctttgttttctgagacggagtctctctctcttgcccaggctggagtgcaatggtgccatctcagctcactgcagcctctgctccccagattcaagcgattctcccacctcagcctctcaagtagctgggattacaggcacctgccacaatgcctggctaatttttgtattgttagtagagatggggtttcaccattttgaccaggctggtctcgaactcctgacctcag----------------gtgatctgcccaccttggcttcccaaagtgctgggattacaggcatgagccactgtgccctgccCA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11431284 360 - 12463322 AGTGAGCCATGGCTGGGCCTG-CCCTGTGAGGCACAGACACCTTGCTtttttgtt-gttttgctttgctttgttttttgagacggagtctcactctcttgcccaggctggagtgccatggtgccatctcagctcactgcagcctctgctccccagattcaagcgattctcccacctcagcctctcaagtagctgggattacaggcacctgccacaatgcctggctaatttttgtattgttagtagagatggggtttcatcgtgttgaccaggctggtctcgaactcctgacctcag----------------gtgatctgcccaccttggcttcccaaagtgctgggattacaggcacgagccactgtgccctgccCA i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170283125 358 + 172585720 AGTGAGCCATGGCTGGGCCTG-CCCCGTGAGGCACAGACACCTTGCtttttgttttgttttgctttactttattttttgaaacagagtctcactctattgcccaggctggagtgcaacggctccatctcagctcactgcagcctctgcttcctggattcaagtggttctcccacctcagcctcccaagtagctgggattacaggcatctgccacaatgcctggctagtttttgtattgttagtagagatggggtttcaccatgttgactaggctggttttgaa---ctgacctcag----------------gtgagccgcccaccttggcctcccaaagtgctgggattacaggcatgagccactgtgcccagccCA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169028729 358 - 170955103 AGTGAGCCATGGCTGGGCCTG-CCCCGTGAGGCACAGACACCTTGCtttttgttttgttttgctttactttattttttgaaacagagtctcactctattgcccaggctggagtgcaacggctccatctcagctcactgcagcctctgcttcctggattcaagtggttctcccacctcagcctcccaagtagctgggattacaggcatctgccacaatgcctggctaatttttgtattgttagtagagatggggtttcaccatgttgactaggctggttttgaa---ctgacctcag----------------gtgagccgcccaccttggcctcccaaagtgctgggattacaggcatgagccactgtgcccagccCA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8315989 358 + 10161646 AGTGAGCCATGGCTGGGCCTG-CCCCATGAGGCACAGACACCTTGCtttttgttttgttttgctttactttattttttgaaacagagtctcactctattgcccaggctggagtgcaacggctccatctcagctcactgcagcctctgcttcctggattcaagtggttctcccacctcagcctcctaagtagctgggattacaggcatctgccacaatgcctggctaatttttgtattgttagtagagatggggtttcaccatgttgactaggctggttttgaa---ctgacctcag----------------gtgagccgcccaccttggcctcccaaagtgctgggattacaggcatgagccactgtgcccagccCA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1345631 358 + 3144229 AGTGAACCATGGCTGGGCCTG-CCCCGTGAGGCACAGACACCTTGCtttttgttttgttttgctttgctttgttttttgaaacagagtctcactctattgcccaggctggagtgcaacggctccatctcagctcactgcagcctctgcttcctggattcaagtggttctcccacctcagcctcccaagtagctgggattacaggcatctgccacaatgcctggctaatttttgtattgttagtagagatggggtttcaccatgttgaccaggctggttttgaa---ctgacctcag----------------gtgaactgcccaccttggtctccccaagtgctgggattacaggcatgagccgctgtgcccagccCA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96624772 372 + 98384682 AGTGAACCATGGCTGGGCCTG--CCCGTGAGGCACAGACACCTTGCtttttgttttgttttgttttgctttgttttttgaaacagagtctcactctattgcccaggctggagtgcaaccgctccacctcagctcactgcagcctctgcttcccggattcaagtggttctcccacctcagcctcccaagtagctgggattacaggcatctgccacaatgcctggctaatttttgtattgttagtagagatggggtttcaccatgttgaccaggctggttttgaa---ctga-ctcaggtgaaccgcccaccttgtgaaccgcccaccttggcctcccaaagtgctgggattacaggcatgagccactgtgcccagccCA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8167668 358 - 10857215 AGTGAACCATGGCTGGGCCTG-CCCCGTGAGGCACAGACACCTTGCtttttgttttgttttgctttgctttgttttttgaaacagagtctcactctattgcccaggctggagtgcaacggctccatctcagctcactgcagcctctgcttcctggatccaagtggttctcccacctcagcctcccaagtagctgggattacaggcatctgccacaacgcctggctaatttttgtattgttagtagagatggggtttcaccatgttgaccaggctggttttgaa---ctgacctcag----------------gtgaaccgcccaccttggtctcccaaagtgctgggattacaggcatgagccgctgtgcccagccCA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15563442 358 - 23502949 AGTGAACCATGGCTGGGCCTG-CCCTGTGAGGCACAGACACCTTGCtttttgttttgttttgctttgctttgttttttgaaacagagtcttactctattgcccaggctggagtgcaacggctccatctcagctcactgcagcctctgctttctggattcaagtggttctcccacctcagcctcccaagtagctgggattacaggcatctgccacaatgcctgactaatttttgtattgttagtagagatggggtttcaccatcttgaccaggctggttttgaa---ctgacctcag----------------gtgaactgcccaccttggcctcccaaagtgctgggattacaggcatgagccactgtgcccagccCA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169831889 350 + 171630274 AGTGAGCCGCGGCTGGGCCTGCCCCTGCCAGGCGCAGACACCttgtttttcattttgttttg------------tttcaagttggattctcactctgttgcccgggctggagtgcaatggtgccatctcggctcactgtgacctctgcttcccaggttcaagtgcttttcccacctcagcctcccaagtagctgggattacaagcacctgccccagtgcctggctaatttctgtattgttagtagagatggggtttccccacgttgaccaggctggtcttgaacttctgacctcac----------------atgatctgccagccttggcctcccaaagcgctgggatcacaggcacgagccaccatgcccggcTCA i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1206136 357 - 2164891 AGTGAGCCATGGCTGGGCCTGCCCCTGCGAGGCGCAGACACCTTGttttttattttgttttgt-----tttgttttttgagttggattctcactctgttgcccaggctggagtgcaatggcaccagctcggctcactgtgacctctgcttcccaggttcaagtgcttttcccccctcagcctcccaagtagctgggattacaagcacctgccgcaatgcctagctaattttcgtattgttaatagagatggggtttccccatgttgcccaggctggtcttgaacttctgacctcat----------------gtgatctgcctgccttggcctcccaaagcactggaattacaagcatgagccaccatgcccagccCA i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1454760 356 - 1813869 AGTGAGCCACGGCTGAGGCTGCCCCTGCGAGGTGCAGACA-CTTGttttttattttgttttgt-----tttgttttttgagttggattctcactctgttgcccaggctggagtgcaatggcaccatctcggctcactgtgacctctgcttcccaggttcaagtgctcttcccacctcagcctcccaagtagctgggattacaagctcctgccccaatgcctggctaatttttgtattgttagtagagatggggtttcctcatgctgaccaggctggtcttgaacttccgacctcac----------------gtgatctgccggccttggcctcccaaagcactgggattacaggcatgagccaccatgcccggccCA i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10920790 1072 - 12073884 I e saiBol1.JH378287 1251282 0 - 2905041 C e dasNov3.JH569188 493746 42 + 760995 I e canFam3.chr1 56139035 807 + 122678785 I e nomLeu3.chr3 156251705 0 + 157873769 C a score=311705.000000 s hg38.chr6_KB021644v2_alt 28347 43 + 185823 CCCTTGTTTTAAGGTTG---GAATTAATACATAGATGAAAGAACAG s panTro5.chr6 173494791 43 + 175400573 CCCTTGTTTTAAGGGTG---GAATTAATACACAGATGAAAGAACAG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171744842 43 + 173848474 CCCTTGTTTTAAGGGTG---GAATTAATACACAGATGAAAGAACAG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11431644 43 - 12463322 CCCTTCTTTTAAGGGTG---GAATTAATACACAGATGAAAGAACAG i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170283483 43 + 172585720 CCCTTGTTTTAAGGGTG---GAATTCATACACAGATGAGAGAACAG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169029087 43 - 170955103 CCCTTGTTTTAAGGGTG---GAATTCATACACAGATGAGAGAACAG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8316347 43 + 10161646 CCCTTGTTTTAAGGGTG---GAATTAATACACAGATGAGAGAACAG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1345989 43 + 3144229 CCCTTGTTTTAAGGGTG---GAATTAATACACAGATGAGAGAACAG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96625144 43 + 98384682 CCCTTGTTTTAAGGGCG---GAATTAATACACAGATGAGAGAACAG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8168026 43 - 10857215 CCCTTGTTTTAAGGGTG---GAATTAATACACAGATGAGAGAACAG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15563800 43 - 23502949 CCCTTGTTTTAAGGGTG---GAATTAATACACAGATGAGAGAACAG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169832239 29 + 171630274 CCCTCT-----------------TTAACACATAGAGGAAGGAAGAG i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1206493 43 - 2164891 CCCTTGCTTTAAGGGAG---GAATTAATACATAGAGGAAGGAAGAG i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1455116 43 - 1813869 CCCTTGTTTTAAGGGTG---GAATTAATACATAGAGGAAGGAAGAG i aotNan1.NW_018494782v1 C 0 C 0 s dasNov3.JH569188 493788 46 + 760995 CCCTTGTTTTAAGGAGGACAGAATTAATACATTAAGGAAAGACTAA i dasNov3.JH569188 I 42 C 0 e otoGar3.GL873575 10920790 1072 - 12073884 I e saiBol1.JH378287 1251282 0 - 2905041 C e canFam3.chr1 56139035 807 + 122678785 I e nomLeu3.chr3 156251705 0 + 157873769 C a score=584663.000000 s hg38.chr6_KB021644v2_alt 28390 80 + 185823 TGGAAACCGGTGTAATAAAACTCTTCGGCCACACACTCA-TTTCATCCCCTCCATCTTCCTACAACTGCCTTGATTTTGTT s panTro5.chr6 173494834 80 + 175400573 TGGAAACCGGTGTAATAAAACTCTTTGGCCACACACTCA-TTTCATCCCCTCCGTCTTCCTACAACTGCCTTGATTTTGTT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171744885 80 + 173848474 TGGAAACCGGTGTAATAAAACTCTTTGGCCACACACTCA-TTTCATCCCCTCCGTCTTCCTACAACTGCCTTGATTTTGTT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11431687 81 - 12463322 TGGAAACCGGTGTAATAAAACTCTTTGGCCACACACTGATTTTCATCCCCTCCGTCTTCCTACAACTGCCTTGATTTTGTT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156251705 81 + 157873769 TGGAAACCGGTGTAATAAACCTCTTTGGCCATACACTCATTTTCATCCCCTCCGTCTTCCTACAACTGCCTTGATTTTGTT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170283526 81 + 172585720 TGGAAACCAGTGTAATAAACCTCTTTGGCCACACGTTCATTTTCATTCCCTCCTTTTTCCTACAACTGTCTTGATTTTGTT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169029130 81 - 170955103 TGGAAACCAGTGTAATAAACCTCTTTGGCCACACGTTCATTTTCATTCCCTCCTTTTTCCTACAACTGTCTTGATTTTGTT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8316390 81 + 10161646 TGGAAACCAGTGTAATAAACCTCTTTGGCCACACGTTCATTTTCATTCCCTCCTTTTTCCTACAACTGTCTTGATTTTGTT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1346032 81 + 3144229 TGGAAACCAGTGTAATAAACCTCTTTGGCCACACATTCATTTTCATTCCCTCCTTTTTCCTACAACTGTCTTGATTTTGTT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96625187 81 + 98384682 TGGAAACCAGTGTATTAAACCTCTTTGGCCACACATTCATTTTCATTCCCTACTTTTTCCTACAACTGTCTTGATTTTGTT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8168069 81 - 10857215 TGGAAACCAGTGTAATAAACCTCTTTGGCCACACATTCATTTTCATTCCCTCCTTTTTCCTACAACTGTCTTGATTTTGTT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15563843 81 - 23502949 CAGAAACCAGTGTAATAAACCTCTTTGGCCACACATTCATCTTCATTCCCTCCTTTCTCCTACAACTGTCTTGATTTTGTT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169832268 65 + 171630274 TGGAAAGCAGTGTAATAAACCTC---------------ATTTTCATCTCCCCCTTCTTCCTACAACCA-ATTGGTTTTATT i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1206536 65 - 2164891 TGGAAAGCAGTGTAATAAACCTC---------------ATTTTCATCTCCCCCTTCTTCCTACAACCG-ATTGGTTTTATT i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1455159 64 - 1813869 TGGAAAGCAGTGTAATAAACCTC---------------ATTCTCATC-CCCTCTTCCTCCTACAACCG-ATTGGTTTTATT i aotNan1.NW_018494782v1 C 0 C 0 s dasNov3.JH569188 493834 80 + 760995 TACAAAATGGCATAATAAATAT-TTTGGTTGCATACCTGGCATTATCCCCTTTTTCTTTCTGAGAGTCTCTTGGTTTTGTT i dasNov3.JH569188 C 0 I 1032 e otoGar3.GL873575 10920790 1072 - 12073884 I e saiBol1.JH378287 1251282 0 - 2905041 C e canFam3.chr1 56139035 807 + 122678785 I a score=3353712.000000 s hg38.chr6_KB021644v2_alt 28470 410 + 185823 GATG-----------------------TCGATCTCAGAGGAATCTGGCCCCACTGACTGTTTTAATAATGATTCCATTCCCCTTCCTGGTGACTGTCAGTGAGTGGGTGTTGgaaagtgactgtatttggacagggcctttgaagaggtgatcaagttacaacaaggccacgagggtgcctaatccagtctaacgatgtccttctacgaagaggagatttggacacacagagatactggggatttgtgtgcctagagggacgaccgcgcgaggacatagccagcagccgc-gtctcaagacaaagaggcggcccctgagaaaccaccctgcctgtacctcgaccttcgccttccaaccccgagaaagacaaggacatagatgtctgtggttactacccgggct-ctggtgttagggcagcTGAACCGGCTGAGAC s panTro5.chr6 173494914 410 + 175400573 GATG-----------------------TCGATCTCAGAGGAATCTGGCCCCACTGACTGTTTTAATAATGATTCCATTCCCCTTCCTGGTGACTGTCAGTGAGTGGGTGTTGgaaagtgactgtatttggacagggcctttgaagaggtgatgaagttaaaacgaggccacgagggtgcctaatccagtccaacgatgtccttctacgaagaggagatttggacacacagagatactggggatttgtgtgcctagagggacgaccgcgcgaggacatagccagcagccgc-gtctcaagacaaagaggcggcccctgagaaaccaccctgcctgtacctcgaccttcgccttccaaccccgagaaagacaaggacatagatgtctgtggttactatccgggct-ctggtgttagggcagcTGAGCCGGCTGAGAC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171744965 410 + 173848474 GATG-----------------------TCGATCTCAGAGGAATCTGGCCCCACTGACTGTTTTAATAATGATTCCATTCCCCTTCCTGGTGACTGTCAGTGAGTGGGTGTTGgaaagtgactgtatttggacagggcctttgaagaggtgatgaagttaaaacgaggccacgagggtgcctaatccagtccaacgatgtccttctacgaagaggagatttggacacacagagatactggggatttgtgtgcctagagggacgaccgcgcgaggacatagccagcagccgc-gtctcaagacaaagaggcggcccctgagaaaccaccctgcctgtacctcgaccttcgccttccaaccccgagaaagacaaggacatagatgtctgtggttactatccgggct-ctggtgttagggcagcTGAGCCGGCTGAGAC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11431768 408 - 12463322 GATG-----------------------TCGATCTCAGAGGAATCTGGCCCCACCGACTGTTTGAATAATGATTCCATTCCCCTTCCTGGTGACTGTCAGTGAGTGAGTGTTGgaaagtgactgtatttggacagggcctttgaagaggtgacggagttaaaacgaggccacgagggtgcctaatccagtctaacgatgtccttctacgaagaggagatttggacacacagagatactggggatttgtgtgcctagagggacgacc-cgcgaggacatagct-gcagccgc-gtctcaagacaaagaggcggcccctgagaaaccaccctgcctgtacctcgaccttcgccttccaaccccgagaaagacaaggacatagatgtctgtggttactacccgggct-ctggtgttagggcagcTGAGCCGGCTGAGAC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156251786 407 + 157873769 GATG-----------------------TCAATCTCAGAGGAATCTGGCCCCACTGACTGTTT---TAATGATTCCATTCCCCTTCCTGGTGACTCTCAGTGAGTGGGTGTTGgaaagtgactgtatttggacagggcctttgaagaggtgatgaagttaaaacgaggccacgagggtgcctaatccagtctaacgatgtccttctaggaagaggagatttggacacacagagataccggggggttgtgtgcctagagggaccaccgcgcgagaacacagctagcagccgc-atctcaagacaaagaggcggcccctgagaaaccaccctgcctgtacctcgaccttcgccctccaaccctgagaaagacaaggacatagatgtctgtggctactactcgggct-ctggtgttagggcagcTGAGCGGGCTGAGAC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170283607 411 + 172585720 GATG-----------------------TTGATCTCAGAGGAATTTGGCCCCACTGATTGTTTTAATAATGATTCCATTCCCCTTCCTGGTGACTGTCAGTGAGTGGGTGTTGgaaagtgactgtatttggacagggcctttgaagaggtgatgaagttaaaacaaggccacgagggtgcctaatccagtctaacgatgtccttctaaaaagaggacatttggacgcacagagatactggggatttatgtgcacagagggatgactgtgcaaggacacagccagcagccgt-gtctcaagacaaagaggcggtccctgagaaaccaccccgcctgcacctcgaccttggccctccatccccgagaaagacaaggacatagacgtctgtggttaccacccaggctgttggtgttagggcagcTGAGCCGGCTGAGAC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169029211 411 - 170955103 GATG-----------------------TTGATCTCAGAGGAATTTGGCCCCACTGATTGTTTTAATAATGATTCCATTCCCCTTCCTGGTGACTGTCAGTGAGTGGGTGTTGGGAAgtgactgtatttggacagggcctttgaagaggtgatgaagttaaaacaaggccacgagggtgcctaatccagtctaacgatgtccttctaaaaagaggacatttggacgcacagagatactggggatttatgtgcacagagggatgactgtgcaaggacacagccagcagccgt-gtctcaagacaaagaggtggtccctgagaaaccaccccgcctgcacctcgaccttggccctccatccccgagaaagacaaggacatagacgtctgtggttaccacccaggctgttggtgttagggcagcTGAGCCGGCTGAGAC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8316471 411 + 10161646 GATG-----------------------TTGATCTCAGAGGAATTTGGCCCCACTGATTGTTTTAATAATGATTCCATTCCCCTTCCTGGTGACTGTCAGTGAGTGGGTGTTGGGAAgtgactgtatttggacagggcctttgaagaggtgatgaagttaaaacaaggccacgagggtgcctaatccagtctaacgatgtccttctaaaaagagggcatttggacacacagagatactggggatttatgtgcacagagggatgactgtgcaaggatacagccagcagccgt-gtctcaagacaaagaggcggtccctgagaaaccaccccgcctgcacctcgaccttggccctccatccccgagaaagacaaggacatagacgtctgtggttaccacccaggctgttggtgttagggcagcTGAGCCGGCTGAGAC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1346113 411 + 3144229 GATG-----------------------TTGATCTCAGAGGAATCTGGCCCCACTGATTGTTTTAATAATGATTCCATTCCCCTTCCTGGTGACTGTCAGTGAGTGGGTGTTGgaaagtgactgtatttggacagggcctttgaagaggtgataaagttaaaacaaggccacgagggtgcctaatccagtctaacgatgtccttctaaaaagaggagatttggacccatagagataccagggatttatgtgaacagagggatgactgcgcaaggacacagccagcagccat-gtctcaagacaaagaggcggtccctgagaaaccaccctgcctgcacctcgaccttggccctccatccccgagaaagataaggacatagacgtctgtggttaccacccaggctgttggtgttagggcagcTGAGCCGGCTGAGAC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96625268 411 + 98384682 GATG-----------------------TTGATGTCAGAGGAATCTGGCCCCACCCATTGTTTTAATAATGATTCCATTCCCCTTCCTGGTGACTGTCAGTGAGTGGGTGTTGgaaagtgactgtatttggacagggcctttgaagaggtgatgaagttaaaacaaggccacgagggtgcctaatccagtctaacgatgtccttctaaaaagaggagatttggacgcacagagattctggggatttatgtgcacagagggatgactgtgcaaggacacagccagcagccat-gtctcaagacaaagaggcggtccctgagaaaccaccctgcctgcacctcaaccttagacctccatccctgagaaagacaaggacatagacgtctgtggttaccacccgggctgttggtgtcagggcagcTGAGCCGGCTGAGAC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8168150 411 - 10857215 GATG-----------------------TTGATCTCAGAGGAATCTGGCCCCACTGATTGTTTTAATAATGATTCCATTCCCCTTCCTGGTGACTGTCAGTGAGTGGGTGTTGgaaagtgactgtatttggacagggcctttgaagaggtgataaagttaaaacaaagccatgagggtgcttaattcagtctaacgacgtccttctaaaaagaggagatttggacccacagagaaaccagggatttatgtgaacagagggatgactgtgcaaggacacagccagcagccgt-gtctcaagacaaagaggcggtccctgagaaaccaccctgcctgcacctcgaccttggccctccatccccgagaaagacaaggacatagacgtctatggttaccacccaggctgttggtgttagggcagcTGAGCCGGCTGAGAC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15563924 411 - 23502949 GTTG-----------------------TGGATCTCAGAGGAATCTGGCCCCACTGATTGTTTTAATAATGATTCCATTCCCCTTCCTGGTGACTGTCAGTGAGTGGGTGTTGgaaagtgactgtatttggacagggcctttgaagaggtgatgaagttaaaacaaggccacgagggtgcctaatccagtctaacgatgtccttctaaaaagaggagatttggacgcacagagatactagggatttatgtgcacagagggatgactgcgcaaggacacagccagcagccgt-gtctcaagacgaagaggcggtccctgaaaaaccaccctgcctgcacctcgaccttggccctccaacccccagaaagccaaggacatagacgtctgtggttaccaccccggctgttggtgttagggctgcTGAGCCGGCTGACAC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169832333 433 + 171630274 GATGCATCTACTCCTCCCCCAGTTCCATTGGTGTCAGAGGAATCTGGCCCCACTGAGTGTTTGAATAATGATTCCATTCCTCTTCCTGGTGGCTGTCAGTGAGTGGGTGTTGgaaagtgtctctatttggacagggtctttgaagaagtg-gtaagttaaactgaggccgcgagggtgcctcatccaggctgaggatgtccttccaagaagaggagatttggacacgcagagacaccagggatttgtgtgcacggagggatgaccacgggaggacacggagagcatctgctgtctccagccaaagacggggcccctgagaaaccacccagccggccccttgaccttggacctccagtccccagaaagacaaggacacagacggctgtggttaccacctggggg-gtggtgttagggcagccAAGACAGCTGAGGC i calJac3.chr4 C 0 I 226 s cebCap1.NW_016107695v1 1206601 433 - 2164891 GATGTATCTACCCCTCCCCCAATTCCATTGGTCTCAGAGGAATCTGGCCCCACTGAGTGTTTGGATAATGATATCATTCCTCCTCCTGGTGGCTGTCAGTGAGAGGGTGGTagaaagtggctatatttggacagggtctttgaagaggtg-ttaagttaaaccgaggccacgagggtgtctcatccagcctgaggatgtccttccaagaagaggagatttggacacgcagagacaccagggatttgcgtgcacagagggatgaccacgggaggacgcagcgaccatctgctgtctcaggccaaagagggggcccctgagaaaccacccagccggcaccttggccttggacctccagtccctagagagacaaggacatagacgtctgtggttaccacctggggt-gtgttgttagggcagccTAGATGGCTTAGGC i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1455223 434 - 1813869 GATGTATCTACCCCTCCCCCAATTCCATTGATCTCAGAGGAATCTGGCCCCACTGAGTGTTTGAATAATGATTCCATTTCTCTTCCTGGTGGCTGTCAGTGAACGGGTGttagaaagtggctatatttggacagggtctttgaagaggtgtttaagttaaaccaaggccacaagggtgtctcatccaggctgaggatgtccttccaagaagaggagatttggacacgcagagacgccagggatttgtgtgcacagaggggtgaccacaggaggacacagcgagcatctgtggtctcaagccaaagagggggcccctgagaaaccacccagccggcaccttgaccttggacctccagtcccaagaaagacaaggacatagatgtctgtggttaccacctggggt-gtgttgtcagggcagccAAGACGGCTGAGGC i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10920790 1072 - 12073884 I e saiBol1.JH378287 1251282 0 - 2905041 C e dasNov3.JH569188 493914 1032 + 760995 I e canFam3.chr1 56139035 807 + 122678785 I a score=6006.000000 s hg38.chr6_KB021644v2_alt 28880 1 + 185823 T s panTro5.chr6 173495324 1 + 175400573 T i panTro5.chr6 C 0 C 0 s panPan2.chr6 171745375 1 + 173848474 T i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11432176 1 - 12463322 T i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156252193 1 + 157873769 T i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170284018 1 + 172585720 T i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169029622 1 - 170955103 T i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8316882 1 + 10161646 T i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1346524 1 + 3144229 T i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96625679 1 + 98384682 T i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8168561 1 - 10857215 T i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15564335 1 - 23502949 T i colAng1.NW_012114488v1 C 0 C 0 e otoGar3.GL873575 10920790 1072 - 12073884 I e saiBol1.JH378287 1251282 0 - 2905041 C e aotNan1.NW_018494782v1 1455657 0 - 1813869 C e cebCap1.NW_016107695v1 1207034 0 - 2164891 C e calJac3.chr4 169832766 226 + 171630274 I e dasNov3.JH569188 493914 1032 + 760995 I e canFam3.chr1 56139035 807 + 122678785 I a score=69227.000000 s hg38.chr6_KB021644v2_alt 28881 8 + 185823 AGGGGCCC s panTro5.chr6 173495325 8 + 175400573 GGGGGCCC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171745376 8 + 173848474 GGGGGCCC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11432177 8 - 12463322 GGGGGCCC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156252194 8 + 157873769 GGGGGCCC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170284019 8 + 172585720 GGGGGCCC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169029623 8 - 170955103 GGGGGCCC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8316883 8 + 10161646 GGGGGCCC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1346525 8 + 3144229 GGGGGCCC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96625680 8 + 98384682 GGGGGCCC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8168562 8 - 10857215 GGGGGCCC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15564336 8 - 23502949 GGGGGCCT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169832992 8 + 171630274 AGGGGCCC i calJac3.chr4 I 226 C 0 s cebCap1.NW_016107695v1 1207034 8 - 2164891 GGGGTCCC i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1455657 6 - 1813869 --GGGGCC i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10920790 1072 - 12073884 I e saiBol1.JH378287 1251282 0 - 2905041 C e dasNov3.JH569188 493914 1032 + 760995 I e canFam3.chr1 56139035 807 + 122678785 I a score=440047.000000 s hg38.chr6_KB021644v2_alt 28889 56 + 185823 TGGACCTGGGACCCTGTCCCCATCCTCCCTCCCTTGTGGTGACATCTTCTGCATAT s panTro5.chr6 173495333 56 + 175400573 TGGACCTGGGACCCTGTCCCCATCCTCCCTCCCTCGTGGTGACATCTTCTGCATAT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171745384 56 + 173848474 TGGACCTGGGACCCTGTCCCCATCCTCCCTCCCTCGTGGTGACATCTTCTGCATAT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11432185 55 - 12463322 TGGACCTGGGACCCTGTCCCCATCC-CCCTCCCTCGTGGTGACATCTTCTGCATAT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156252202 56 + 157873769 TGGACCTGGGACACTGTCCCCATCCCCCCTCCCTCGTGGTGCCATCTTCTGCCCAT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170284027 56 + 172585720 TGCACCTGGGACCCTGTTCCTGTCCCCCCTCCCTCGTGGTGCCATCTTCTGCCCAT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169029631 56 - 170955103 TGCACCTGGGACCCTGTTCCTGTCCCCCCTCCCTCGTGGTGCCATCTTCTGCCCAT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8316891 53 + 10161646 TGCACCTGGGACCCTGTTCCTGTCCCCCCTCCCTCGTGGTGCCATCTTCTGCC--- i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1346533 56 + 3144229 TGCACCTGGGACCCTGTTCCTGTCCCCCCTCCCTCGTGGTGCCATCTTCTGCCCAT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96625688 56 + 98384682 TGCACCTGGGACCCTGTTCCCATCCCCCCTCCCTGGTGGTGCCATCTTCAGCCCAT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8168570 56 - 10857215 TGCACCTGGGACCCTGTTCCCGTCCCCCCTCCCTCGTGGTGCCATCTTCTGCCCAT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15564344 55 - 23502949 TGCACCTGGGACCCTGTTCCCAT-CCCCCTCCCTCGTGGTGCCATCTTCTGCCCAT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169833000 55 + 171630274 TGGACCTGGGACTCTGTCCCCATGCCCCTTCCCCTGTGGTGCTGTCTTCTGCCCA- i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1207042 56 - 2164891 TGGACCTGGGACTCTGTCCCCATTCCCCTTCCCCGGTGGTGCTGTCTTCTGCCCAC i cebCap1.NW_016107695v1 C 0 I 14 s aotNan1.NW_018494782v1 1455663 55 - 1813869 TGGACC-GGGACTCTGTCCCCATCCCCCTTCCCGTGTGGTGCTGTCTTCTGCCCAC i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10921862 52 - 12073884 TGGGCCTGG--CCCTGTGACTGTC--TCCTCCCACATGATACCCTCTGTTCTCCAT i otoGar3.GL873575 I 1072 C 0 e saiBol1.JH378287 1251282 0 - 2905041 C e dasNov3.JH569188 493914 1032 + 760995 I e canFam3.chr1 56139035 807 + 122678785 I a score=105026.000000 s hg38.chr6_KB021644v2_alt 28945 17 + 185823 GCAAAGCGCAGGACCTG s panTro5.chr6 173495389 17 + 175400573 GCAAAGAGCAGGACCTG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171745440 17 + 173848474 GCAAAGAGCAGGACCTG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11432240 17 - 12463322 GCAAAGAGCAGGACCTG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156252258 17 + 157873769 GCAAAGAGCCGGACCTA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170284083 17 + 172585720 TCAAAGAGCCGGAACTA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169029687 17 - 170955103 TCAAAGAGCCGGAACTA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8316944 16 + 10161646 -CAAAGAGCCGGAACTA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1346589 17 + 3144229 GCAAAGAGCCGGAACTA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96625744 17 + 98384682 GCAAAGAGCCGGAACTA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8168626 17 - 10857215 GCAAAGAGCCGAAACTA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15564399 17 - 23502949 GCAAAGAGCCAGAACTA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169833055 17 + 171630274 GCAGAGAGCCAGAGTGT i calJac3.chr4 C 0 C 0 s aotNan1.NW_018494782v1 1455718 16 - 1813869 -CAGAGAGCCGGAGTGT i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10921914 17 - 12073884 GGAAGGAGCCAGAACTA i otoGar3.GL873575 C 0 C 0 e saiBol1.JH378287 1251282 0 - 2905041 C e cebCap1.NW_016107695v1 1207098 14 - 2164891 I e dasNov3.JH569188 493914 1032 + 760995 I e canFam3.chr1 56139035 807 + 122678785 I a score=948464.000000 s hg38.chr6_KB021644v2_alt 28962 122 + 185823 GAATGAAGCTGCCGTTTGGGCCACAGGAGATAAGGAATTTCCTTTTGATTTCAGCGTGTTTGGGCCAATTTCTTT--CTCCTCCTGCCACCTGAAGCTGAA-GCGTCCTGTTAGTA--------TCATCACTA s panTro5.chr6 173495406 122 + 175400573 GAATGAAGCTGCCGTTTGGGCCACAGGAGATAAGGAATTTCCTTTTGATTTCAGCGTGTTTGGGCCAATGTCTTT--CTCCCCCTGCCACCTGAAGCTGAA-GAGTCCTGTTAGTA--------TCATCACTA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171745457 122 + 173848474 GAATGAAGCTGCCGTTTGGGCCACAGGAGATAAGGAATTTCCTTTTGATTTCAGCGTGTTTGGGCCAATTTCTTT--CTCCCCCTGCCACCTGAAGCTGAA-GCGTCCTGTTAGTA--------TCATCACTA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11432257 122 - 12463322 GAATGAAGCTGCCGTTTGGGCCACAGGAGATAAGGAATTTCCTTTTGATTTCAGCGTGTTTGGGCCAATTTCTTT--CTCCCCCTGCCACCTGAAGCTGAA-GCGTCCTGTTAGCA--------TCATCACTA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156252275 119 + 157873769 GAATGAAGCTGCCGTTTGGGCCACATGAGATAAGGAATTTCCTTTTGATTTCAGCGTGTTTGGGCCAATTTATTT--CTCCCCCTGCCACCTGAAGCTGAA-GCGTCCTGTTAGT-----------ATCACTA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170284100 119 + 172585720 GAATGAAGCTGCCGTTTGGGCCACATGAAATAAGGAATTTCCTTTTTATTTCAGCTTGTTTGGGCCAATTTCTTT--CTCCCCCTGCTACCTGAAGCTGAA-GCATCGTGTTAGT-----------ATCATTG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169029704 119 - 170955103 GAATGAAGCTGCCATTTGGGCCACATGAAATAAGGAATTTCCTTTTTATTTCAGCTTGTTTGGGCCAATTTCTTT--CTCCCCCTGCTACCTGAAGCTGAA-GCATCGTGTTAGT-----------ATCATTG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8316960 119 + 10161646 GAATGAAGCTGCCGTTTGGGCCACATGAAATAAGGAATTTCCTTTTTATTTCAGCTTGTTTGGGCCAATTTCTTT--CTCCCCCTGCTACCTGAAGCTGAA-GCATCGTGTTAGT-----------ATCATTG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1346606 119 + 3144229 GAATGAAGCTGCCGTTTGGGCCACATGAAATAAGGAATTTCCTTTTTATTTCAGCTTGTTTGGGCCAATTTGTTT--CTCCCCCTGCTACCTGAAGCTGAA-GCATCGTGTTAGT-----------ATCATTG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96625761 119 + 98384682 GAATGAAGCTGCCGTTTGGGCCACATGAAATAAGGAATTTCCTTTTTATTTCAGCTTGTTTGGGCCAATTTCTTT--CTCTCCCTGCTACCTGAAGCTGAA-GCATCGTGTTAGT-----------ATCATTG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8168643 119 - 10857215 GAATGAAGCTGCCGTTTGGGCCACATGAAATAAGGAATTTCCTTTTTATTTCAGCTTGTTTGGGCCAATTTGTTT--CTCCCCCTGCTACCTGAAGCTGAA-GCATCGTGTTAGT-----------ATCATTG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15564416 119 - 23502949 GAATGAAGCTGCCGTTTGGGCCACATTAAATAAGGAATTTCCTTTTTATTTCAGCTTGTTTGGGCCAATTTCTTT--CTCCCCCTGCTACCTGAAGCTGAA-GCATCCTGTTAGT-----------ATCACTG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169833072 109 + 171630274 GACTGCACCTGCTGTTTTGGCCACGTGAGATAAGCAATTTTCTTCGGCTTTCAGCTTGTTGGGGCCAGTTTCTTT--CT-CCCCTGCTACCTGAAGCTGAA-GCAT--------------------GATAGTA i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1207112 109 - 2164891 GAATGAAGCTGCTGTTTTGGCCCTGGGGGATAAGCAATTTCCTTT-GCTTTCAGCTTGTTCGGGCCAATTTCTTT--CTCCCCCTGCTACCTGAAGCTGAA-GCCT--------------------GATACTA i cebCap1.NW_016107695v1 I 14 C 0 s aotNan1.NW_018494782v1 1455734 110 - 1813869 GAATGAAGCTGCTGTTTGGGCCGTGTGAGATAAGCAATTTCTTTTGGCTTTCAGCTTGTTTGGGCCAATTTCTTT--CTCCCCCTGCTACCTGAAGCTGAA-GTAT--------------------GATACTA i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10921931 133 - 12073884 GAATATGGCTGTTCTTCCTGTTACATGTGGTAAGAAGTTTCCTTTTGATTTAAGCATGTTGGGACCAGTTTGCTCTGTTTCCCCTGCTGCCTGTAGCTGAACCCACCCCATTCATACCTTACTGTCACCACTA i otoGar3.GL873575 C 0 I 178 e saiBol1.JH378287 1251282 0 - 2905041 C e dasNov3.JH569188 493914 1032 + 760995 I e canFam3.chr1 56139035 807 + 122678785 I a score=492109.000000 s hg38.chr6_KB021644v2_alt 29084 55 + 185823 ACAGGATatgcctgtaatctcagcactttaggaggccaaggtgggcagatcacat s panTro5.chr6 173495528 55 + 175400573 ACTGGATatgcctgtaatctcagcactttaggaggccaaggtgggcagatcacat i panTro5.chr6 C 0 C 0 s panPan2.chr6 171745579 55 + 173848474 ACTGGATatgcctgtaatctcagcactttaggaggccaaggtgggcagatcacat i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11432379 55 - 12463322 ACAGGATatgcctgtaatcccagcacttcaggaggccaaggtgggcagatcacat i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156252394 55 + 157873769 ACAGGATatgcctgtaatcccagcactttaggaggccaagttgggcagatcacgt i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170284219 55 + 172585720 ACAGGATacgcctgtaatcccagcactttaggaggccaaggtgggcagatcacgt i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169029823 55 - 170955103 ACAGGATacgcctgtaatcccagcactttaggaggccaaggtgggcagatcacgt i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8317079 55 + 10161646 ACAGGATacgcctgtaatcccagcactttaggaggccaaggtgggcagatcacgt i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1346725 55 + 3144229 ACAGGATacgcctgtaatcccagcactttaggaggccaaggtgggcagatcatgt i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96625880 55 + 98384682 ACAGGATGcacctgtaatcccagcactttaggaggccaaggtgggcagatcacgt i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8168762 55 - 10857215 ACAGGATacgcctgtaatcccagcactttaggaggccaaggtgggcagatcacat i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15564535 55 - 23502949 ACAGGATacacctgtaatcccagcactttaggaggccaaggtgggcagatcacgt i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169833181 55 + 171630274 ACAGGATGTgcctctaatcccagcactttgggaggccaaggcgggcagatcaggt i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1207221 55 - 2164891 ACAGGATGTgcctctaatcccagcacttggggaggccaaggcgggcagatcacat i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1455844 55 - 1813869 ACAGGATGTgcctctaatcccagcactttgggaggccaaggtgggcagatcacgt i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10922064 178 - 12073884 I e saiBol1.JH378287 1251282 0 - 2905041 C e dasNov3.JH569188 493914 1032 + 760995 I e canFam3.chr1 56139035 807 + 122678785 I a score=520129.000000 s hg38.chr6_KB021644v2_alt 29139 54 + 185823 gaggtcaggagtttgagaccagcctgg-----tcaacatagcgaaaccccatctctaca s panTro5.chr6 173495583 54 + 175400573 gaggtcaggagtttgagaccagcctgg-----tcaacatagtgaaaccccatctctact i panTro5.chr6 C 0 C 0 s panPan2.chr6 171745634 54 + 173848474 gaggtcaggagtttgagaccagcctgg-----tcaacatagtgaaaccccatctctact i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11432434 53 - 12463322 gaggtcaggagtttgagaccagcccgg-----tcaacatagtgaaa-cccatctctact i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156252449 54 + 157873769 gaggtcaggagtttgagaccagcctgg-----tcaacatagtgaaaccccatctctact i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170284274 54 + 172585720 gaggtcaggagttcgagaccagcctgg-----tcaacatagtgaaaccccatctctact i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169029878 54 - 170955103 gaggtcaggagttcgagaccagcctgg-----tcaacatagtgaaaccccatctctact i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8317134 54 + 10161646 gaggttaggagttcgagaccagcctgg-----tcaacatagtgaaaccccatctctact i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1346780 54 + 3144229 gaggtcaggagtttgagaccagcctgg-----tcaacagagtgaaatcccatctctact i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96625935 54 + 98384682 gaggtcaggagttcgagaccagcctgg-----tcaacatagtgaaaccccatctctact i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8168817 54 - 10857215 gaggtcaggagtttgagatcagcctgg-----tcaacatagtgaaatcccatctctact i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15564590 54 - 23502949 gaggtcaggagttcgagaccagcctgg-----tcaacatagtgaaacctcatctctact i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169833236 58 + 171630274 -gagtcaggagttcaagaccagcctggtggtctcaacatggtgaaaccccatctctaca i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1251282 58 - 2905041 Aaggtcaggagttcaagaccagcctggtggtctcaacatggtgaaa-cccacccctaca i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1207276 59 - 2164891 gaggtcaggagttcaagaccagcctagtggtctcaacatggtgaaaccccatctctaca i cebCap1.NW_016107695v1 C 0 I 234 s aotNan1.NW_018494782v1 1455899 59 - 1813869 gaggtcaggagttcaagaccagcctggtggtctcaacatggtgaaaccccatctctaca i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10922064 178 - 12073884 I e dasNov3.JH569188 493914 1032 + 760995 I e canFam3.chr1 56139035 807 + 122678785 I a score=1231115.000000 s hg38.chr6_KB021644v2_alt 29193 173 + 185823 aacaatataaaaattagccgggcgtggtggcaggtgcctgtaatcccagctactcgagaggctgaggtgggagaatcggttgaacct-ggaggcagagattgcagtgagccgagatggcaccattgcactccagcttgggcaacagagggcgactctgtctcaaaaaacaaagc s panTro5.chr6 173495637 173 + 175400573 aacaatataaaaattagccgggcatggtggcaggtgcctgtaatcccagctactcgagaggctgaggtgggagaatcggttgaacct-ggaggcagagattgcagtgagccgagatggcaccattgcactccagcttgggcaacagagggcgactctgcctcaaaaaacaaagc i panTro5.chr6 C 0 C 0 s panPan2.chr6 171745688 173 + 173848474 aacgatataaaaattagccgggcgtggtggcaggtgcctgtaatcccagctactcgagaggctgaggtgggagaatcggttgaacct-ggaggcagagattgtagtgagccgagatggcaccattgcactccagcttgggcaacagagggcgactctgcctcaaaaaacaaagc i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11432487 172 - 12463322 aacaatataaaaattagccgggcgtggtggcaggtgcctgtaatcccagctactc-agaggctgaggtgggagaatcggttgaacct-ggaggcagagattgcagtgagccgagatggcaccattgcactccagcttgggcaacagagggcgactctgtctcaaaaaacaaagc i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156252503 173 + 157873769 aacaatataaaaattagccgggcgtggtggcagctgcctgtaatcccagctactcgggaggctgaggtgggagaatcggttgaacct-ggaggcagaggttgcagtgagccgtgacggcaccattgcactccagcttgggcaacagagggagactctgtctcaaaaaacaaagc i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170284328 173 + 172585720 aacaatgcaaaaattagctgggcatgatggcagatgcctgtaattccagccactcagaaggctgaggtggaagaatcagttgaacct-ggagacagaggttgcagtgagcccagaccgcaccattgcaccccagcttgagtaacagagggagactctgtctcaaaaaacaaagc i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169029932 173 - 170955103 aacaatgcaaaaattagctgggcatgatggcagatgcctgtaattccagccactcagaaggctgaggtggaagaatcagttgaacct-ggaggcagaggttgcagtgagcccagaccgcaccattgcaccccagcttgagtaacagagggagactctgtctcaaaaaacaaagc i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8317188 173 + 10161646 aacaatgcaaaaattagctgggcatgatggcagatgcctgtaattccagccactcagaaggctgaggtggaagaatcagttgaacct-ggaggcggaggttgcagtgagcccagaccgcaccattgcaccccagcttgagtaacagagggagactctgtctcaaaaagcaaagc i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1346834 173 + 3144229 aacaatacaaaaattaactgggcgtggtggcagatgcctgtaatcccagccactcagaaggctgaggtggaataatcagttgaacct-ggaggcagaggttgcagtgagccgagatggcaccattgcaccccagcttgagtaacagagggagactctgtctcaaaaaacaaagc i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96625989 173 + 98384682 aacaatacaaaaattagctgggcctggtggcagacgcctgtaagcccagccactcagaaggctgaggtggaagaatcggttgaaact-ggaggcagaggttgcagtgagccgagatggcaccattgcaccccagcttgagtaacagagggagactctgtctcagaaaacaaagc i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8168871 173 - 10857215 aacaatacaaaaattaactgggcgtggtggcagatgcctgtaatcccagccactcagaaggctgaggtggaataatcgattgaacct-ggaggcagtggttgcagtgagccaagatggcaccattgcaccccagcttgagtaacagagggagactctgtctcaaaaaacaaagc i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15564644 173 - 23502949 aacaatacaaaaatcagctgggcgtggtggctggtgcctgtaatcccagccactcagaaggctgaggtggaagaatcagttgaacct-ggaggcagaggttgcagtgagccgagatggcaccattgcaccccagcttgagtaacagagggagactctgtctcaaaaaacaaagc i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169833294 129 + 171630274 ------------------tgagtgtggtggcgggtgcctgtaatcccagcaacttgggagtccgaggtgggagactggcttgaacctgggaagcggaggtcgc---------agaggacgccactgccctcca-cctgggcaacag--------acagtctcaaa--------- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1251340 152 - 2905041 ------------------tgagcgtggtggc-cgtgcctgtaatcccagcaacttgggagtcccaggtgggagactcgcttgaacccaggaagtggaggttgcagtgagccgagaggccgccactgccctccagcctgggcaacag--ggtgacactgtctcaaaaaacaaaG- i saiBol1.JH378287 C 0 C 0 s aotNan1.NW_018494782v1 1455958 154 - 1813869 ------------------tgagcgtggtggcgggtgcctgtaatcccagcaacttgggagtccgaggtgggagactcgcttgaacccgggaagcggaggttgcggtgagtcgagagggcgccactgccctccagcctgggcaacag--ggtgagactgtctcaaaaaacaaaGC i aotNan1.NW_018494782v1 C 0 I 83 e otoGar3.GL873575 10922064 178 - 12073884 I e cebCap1.NW_016107695v1 1207335 234 - 2164891 I e dasNov3.JH569188 493914 1032 + 760995 I e canFam3.chr1 56139035 807 + 122678785 I a score=654534.000000 s hg38.chr6_KB021644v2_alt 29366 129 + 185823 aaaacgaaagaaaCAGGACGTCCTGTTTCTGTGTTTAGTATAGTATCTGTGTTAGTATCCACTCTTGCTGTGCCCCCGCTGGCCGGCCTGTCCTGGTCAAACCCTGGCCCTGGGCCTGATGCTCCTCTA s panTro5.chr6 173495810 124 + 175400573 gaaacgaaagaaaCAGGACGTCCTGTTTCTGTGTTTAGTAT-----CCGTGTTAGTATCCACTCTTGCTGTGCCCCCACTGGCCGGCCTGTCCTGGTCAAGCCCTGGCCCTGGGCCTGATGCTCCTCTA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171745861 124 + 173848474 gaaacgaaagaaaCCGGACGTCCTGTTTCTGTGTTTAGTAT-----CCGTGTTAGTATCCACTCTTGCTGTGCCCCCACTGGCCGGCCTGTCCTGGTCAAGCCCTGGCCCTGGGCCTGATGCTCCTCTA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11432659 122 - 12463322 aaaaggaaagaaaC-GGACGTCCTGTTTCTGTGTTTAGTAT-----CTGTGTTAGTATCCACTCTTGCTGTGCCCCCACTGGCCGGCCTGTCC-GGTCAAGCCCTGGCCCTGGGCCTGATGCTCCTCTA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156252676 115 + 157873769 aaaacaaaagaaaCAGGACGTGCTG---------TTAGTAT-----CTGTGTTAGTATCCGCTCTTGCTGCGCCCCCACTGGCCGGCCTGTCCTGGTCAAGCCCTGGCCCTGGGCCTGATGCTCCTCTA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170284501 115 + 172585720 aaaacaaaagaaaCAGGACGTTCTC---------TTAGTAT-----CTCTGTTAGTATCCACTCTTGCTGCTCCCCCACTGGCCGGCCTGTCCTGGTCAAGCCCTGGCCCTGGGCCTGATGCTCCTCTA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169030105 115 - 170955103 aaaacaaaagaaaCAGGACGTTCTC---------TTAGTAT-----CTCTGTCAGTATCCACTCTTGCTGCTCCCCCActggccggcctgtcctggtcaagccctggccctgggcctgATGCTCCTCTA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8317361 115 + 10161646 aaaacaaaagaaaCAGGACGTTCTC---------TTAGTAT-----CTCTGTTAGTATCCACTCTTGCTGCTCCCCCACTGGCCGGCCTGTCCTGGTCAAGCCCTGGCCCTGGGCCTGATGCTCCTCTA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1347007 114 + 3144229 aaaacaagagaaaCAGGACGTTCTC---------TTAGTAT-----CTCTGTTAGTATCCACTCTTGCTGCTCCCCc-ctggccggcctgtcctggtcaagtcctggccctgggcctgATGCTCCTCTA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96626162 115 + 98384682 aaaacaaaagaaaTAGGACGTTCTC---------TTAGTAT-----CTCTGTTAGTATCCACTCTTGCTGCTCCCCCACTGGCCGGCCTGTCCTGGTCAAGCCCTGGCCCTGGGCCTGATGCTCCTCTA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8169044 115 - 10857215 aaaacaagagaaaCAGGACGTTCTC---------TTAGTAT-----CTCTGTTAGTATCCACTCTTGCTGCTCCCTccctggccggcctgtcctggtcaagccctggccctgggcctgATGCTCCTCTA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15564817 115 - 23502949 aaaacaaaagaaaCAGGACGTTCTC---------TTAGTAT-----CTCTGTTAGTATCCACTCTTGCTCCTCCCCCACTGGCCAGCGTGTCCTGGTCAAACCCTGGCCCTGGGCCTGATGCTCCTCTA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169833423 78 + 171630274 ----------aaaCAGGATGTCCGG---------CCGGTGT-----CACTGTTGGCGTCCGCTGTTGCTGCAGCTCAAT---------------------------GCCCTGGGCCTGGCACCACCCTC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1251492 82 - 2905041 ----CGAACGAAACAGGACGTCGGG---------TTGGCAT-----CACTGCTGG-GTCCGCTACTGCTGCAGCTCAAC---------------------------GCCCTGGGCCT-GCGCGGCCCTC i saiBol1.JH378287 C 0 C 0 e otoGar3.GL873575 10922064 178 - 12073884 I e aotNan1.NW_018494782v1 1456112 83 - 1813869 I e cebCap1.NW_016107695v1 1207335 234 - 2164891 I e dasNov3.JH569188 493914 1032 + 760995 I e canFam3.chr1 56139035 807 + 122678785 I a score=53525.000000 s hg38.chr6_KB021644v2_alt 29495 6 + 185823 AGAATC s panTro5.chr6 173495934 6 + 175400573 AGAATC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171745985 6 + 173848474 AGAATC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11432781 6 - 12463322 AGAATC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156252791 6 + 157873769 AGAATC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170284616 6 + 172585720 AGAACC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169030220 6 - 170955103 AGAACC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8317476 6 + 10161646 AGAACC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1347121 6 + 3144229 AGAACC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96626277 6 + 98384682 AGAACC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8169159 6 - 10857215 AGAACC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15564932 6 - 23502949 AGAACC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169833501 6 + 171630274 AGAACC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1251574 6 - 2905041 AGAACC i saiBol1.JH378287 C 0 C 0 s aotNan1.NW_018494782v1 1456195 6 - 1813869 AGAACC i aotNan1.NW_018494782v1 I 83 C 0 e otoGar3.GL873575 10922064 178 - 12073884 I e cebCap1.NW_016107695v1 1207335 234 - 2164891 I e dasNov3.JH569188 493914 1032 + 760995 I e canFam3.chr1 56139035 807 + 122678785 I a score=1289040.000000 s hg38.chr6_KB021644v2_alt 29501 143 + 185823 GCCGCTCTCCC------CAGT--CAGAGTCCTCATGGCAGCCCCAC------GGTCAGCAGAGCCACGGGCCACCCTCACCCCGAGTCCCGCTGGAAGCCACTCGCCAAGCAGCCTCTCAGGTACCGCCCTCTGT-----GATAAACAGGGCACCATGTCCA s panTro5.chr6 173495940 143 + 175400573 GCCGCTCTCCC------CAGT--CAGAGTCCTCATGGCAGCCCCAC------GGTCAGCAGAGCCACGGGCCACCCTCACCCCGAGTCCCGCTGGAAGCCACTCGCCAAGCAGCCTCTCCGGTACCGCCCTCTGT-----GATAAACAGGGCACCATGTCCA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171745991 143 + 173848474 GCCGCTCTCCC------CAGT--CAGAGTCCTCATGGCAGCCCCAC------GGTCAGCAGAGCCACGGGCCACCCTCACCCCGAGTCCCGCTGGAAGCCACTCGCCAAGCAGCCTCTCCGGTACCGCCCTCTGT-----GATAAACAGGGCACCATGTCCA i panPan2.chr6 C 0 M 529 s gorGor5.CYUI01015032v1 11432787 143 - 12463322 GCCGCTCTCCC------CAGT--CAGAGTCCTCATGGCAGCCCCAC------GGTCAGCAGAGCCACAGGCCACCCTCACCCCGAGTCCCGCTGGAAGCCACTCGCCAAGCAGCCTCTCCGGTACCGCCCTCTGT-----GATAAACAGGGCACCATGTCCA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156252797 151 + 157873769 GCCGCTCTCCC------CAGTCACAGAGTCCTCATGGCAGCCCCACGGTCAGGGTCAGCAGAGCCACGGGCCACCCTCGCCCCGAGTCCCGCTGGAAGCCACTCGCCAAGCAGCCTCTCCGGTACCGCCCTCTGT-----GATAAACAGGGCACCATGTCCA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170284622 145 + 172585720 GCAGCTCTCCC------CAGTCATAGAGTCCTCATGGCAGCCCCGT------GGTCAGCAGAGCCATGGGCCACCCTCACCCCGAGTCCTGCTGGAAGCCACTCGCCAAGCAGCCTCTCTGGTGCCGCCCTCTGT-----GATAGACAGGACACTATTCCCG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169030226 145 - 170955103 GCAGCTCTCCC------CAGTCATAGAGTCCTCATGGCAGCCCCGT------GGTCAGCAGAGCCATGGGCCACCCTCACCCCGAGTCCTGCTGGAAGCCACTCGCCAAGCAGCCTCTCTGGTGCCGCCCTCTGT-----GATAGACAGGACACTATTCCCG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8317482 145 + 10161646 GCAGCTCTCCC------CAGTCATAGAGTCCTCATGGCAGCCCCGT------GGTCAGCAGAGCCATGGGCCACCCTCACCCCGAGTCCTGCTGGAAGCCACTCGCCAAGCAGCCTCTCTGGTGCCGCCCTCTGT-----GACAGACAGGACACTATTCCCG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1347127 145 + 3144229 GCAGCTCTCCC------CAGTCATAGAGTCCTCATGGCAGCCCCGT------GGTCAGCAGAGCCATGGGCCACCCTTACCCCGAGTCCTGCTGGAAGCCACTCGCCAAGCAGCCTCTCTGGTACCGCCCTCTGT-----GATAGACAGGACACTATTCCCG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96626283 145 + 98384682 GCAGCTCTCCC------CAGTCACAGAGTCCTCATGGCAGCCCCGT------GGTCAGCAGAGCCATGGGCCACCCTCACCCCGAGTCCCGCTGGAAGCCATTCGCCAAGCAGCCACTCTGGTACCGCCCTCTGT-----GATAGATAGGACAGCATGTCCA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8169165 145 - 10857215 GCAGCTCTCCC------CAGTCATAGAGTCCTCATGGCAGCCCCGT------GGTCAGCAGAGCCATGGGCCACCCTTACCCCGAGTCCTGCTGGAAGCCACTCGCCAAGCAGCCTCTCTGGTACCGCCCTCTGT-----GACAGACAGGACACTATTCCCG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15564938 145 - 23502949 GCAGCTCTCCC------CAGTCACAGAGTCCTCATGGCAGCCCCGT------GGTCAGCAGAGCCATGGGCCACCCTCATCCCGAGTCCTGCTGGAAGCCACTCGCCAAGCAGCCTCTCTGGTACCGCCCTCTGT-----GATAGACAGGACACCATGTCCA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169833507 149 + 171630274 GCCGCTCTTCC------TGGTCACGGGATCCTCGTGGCAGCCCCAT------GGTCAGCAGGGCCGCTGGTCACCCTCACCCCGAGTCCCGC-GGAAGCCACTCGCGGAGCAGCCTCTCCGGTACCACCCTTTGCTGATGGATGAACAGGGCACCGTGTGCA i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1251580 155 - 2905041 TCCGCCCTCCCCGGTCACGGTCACGGGATCCTCGTGGCAGCCCCGC------AGTCAGCAGGGCCACTGGGCACCGTCACCCCGAGTCCCGC-GGAAGCCGCTCGCGGGGCAGCCTCTCTGGTGCCGCCCTTTGCTGACGGATGAACAGGGCACCCTGCGCG i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1207569 147 - 2164891 GCCGCTCTCCC------CGGTCATGGGATCCTCGTGGCAGCCCCAC------GGTCAGCAGGGCCGCTGGTCACCCTCACCACGAGTCCCGC-GGAAGCCACTCGCGGAGCAGCCTCGC-GGTACTGCCCTTTGCTGACGGATGAACAGGGCACC-TGTGCG i cebCap1.NW_016107695v1 I 234 C 0 s aotNan1.NW_018494782v1 1456201 149 - 1813869 GCCGCTCTCCC------CAGTCACGGGATCCTCGTGGCAGCCCCAC------GGTCAGCAGGGCCGCTGGTCACCCTCACCCTGAGTCCCGC-GGAAGCCACTCGCGGAGCAGCCTCTCCGGTACCGCCCTGTGCTGATGGATGAACAGGGCACCGTGTGCG i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10922064 178 - 12073884 I e dasNov3.JH569188 493914 1032 + 760995 I e canFam3.chr1 56139035 807 + 122678785 I a score=213855.000000 s hg38.chr6_KB021644v2_alt 29644 30 + 185823 GGCCAGGAGCCTCCACGAGAGAAAGGTCAG s panTro5.chr6 173496083 30 + 175400573 GGCCAGGAGCCTCCACGAGAGAAAGGTCAG i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11432930 27 - 12463322 GGCCAGGAGCCT---CGAGAGAAAGGTCAG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156252948 30 + 157873769 GACCAGGAGCCTCCACGAGGGAAAGGTCAG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170284767 30 + 172585720 GGCCAGGAGCCTCCACGAGGGAACGGTCAG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169030371 30 - 170955103 GGCCAGGAGCCTCCACGAGGGAACGGTCAG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8317627 30 + 10161646 GGCCAGGAGCCTCCACGAGGGAATGGTCAG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1347272 30 + 3144229 GGCCAGGAGCCTCCACGAGGGAATGGTCAG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96626428 30 + 98384682 GGCCAGGAGCCTCCACGAGGGAATGGTCAG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8169310 30 - 10857215 GGCCAGGAGCCTCCACGAGGGAATGGTCAG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15565083 30 - 23502949 GGCCAGGAGCCTCCACGAGGGAATGGTCAG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169833656 30 + 171630274 GGCCAGGGGCCTCCACCAGAGAAAGGTCAG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1251735 17 - 2905041 GGC------------CCAGAGAACGATCA- i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1207716 30 - 2164891 GGCCAGGGGCCGCCACCAGAGAAAGGTCAG i cebCap1.NW_016107695v1 C 0 I 348 s aotNan1.NW_018494782v1 1456350 30 - 1813869 GGCGAGGGGCCTCCACCATAGAAAGGTCAG i aotNan1.NW_018494782v1 C 0 I 1091 e otoGar3.GL873575 10922064 178 - 12073884 I e dasNov3.JH569188 493914 1032 + 760995 I e canFam3.chr1 56139035 807 + 122678785 I e panPan2.chr6 171746134 529 + 173848474 M a score=44961.000000 s hg38.chr6_KB021644v2_alt 29674 9 + 185823 GGGGACGGA s panTro5.chr6 173496113 9 + 175400573 GGGGACGGA i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11432957 9 - 12463322 GGGGACGGA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156252978 9 + 157873769 GGGGACGAA i nomLeu3.chr3 C 0 I 511 s rheMac8.chr4 170284797 9 + 172585720 GGGGATGGA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169030401 9 - 170955103 GGGGATGGA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8317657 9 + 10161646 GGGGATGGA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1347302 9 + 3144229 GGGGATGGA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96626458 9 + 98384682 GGGGATGGA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8169340 9 - 10857215 GGGGATGGA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15565113 9 - 23502949 GGAGACAGA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169833686 9 + 171630274 AGGGTTGGA i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1251752 2 - 2905041 -------GA i saiBol1.JH378287 C 0 C 0 e otoGar3.GL873575 10922064 178 - 12073884 I e aotNan1.NW_018494782v1 1456380 1091 - 1813869 I e cebCap1.NW_016107695v1 1207746 348 - 2164891 I e dasNov3.JH569188 493914 1032 + 760995 I e canFam3.chr1 56139035 807 + 122678785 I e panPan2.chr6 171746134 529 + 173848474 M a score=96497.000000 s hg38.chr6_KB021644v2_alt 29683 32 + 185823 GCGTGGGGGGGACCGCGTGCACGAGGCGGGGA s panTro5.chr6 173496122 31 + 175400573 GCGTGGGGGGG-CCGCGTGCACAAGGCGGGCA i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11432966 28 - 12463322 GC--GGGGGGG-CCGCGTGCACGAGGCGGG-A i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170284806 32 + 172585720 GCACGGGGGGTGCCGCGAGCAGGAGGCGGGGA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169030410 32 - 170955103 GCACGGGGGGTGCCGCGAGCAGGAGGCGGGGA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8317666 32 + 10161646 GCACGGGGGGTGCCGCGAGCAGGAGGCGGGGA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1347311 32 + 3144229 GCACGGGGGGTGCCCCGAGCAGGAGGCGGGGA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96626467 32 + 98384682 GCACGGGAGGTGCCGCGAGCACGAGGCGGGGA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8169349 32 - 10857215 GCATGGGGGGTGCCGCGAGCAGGAGGCGGGGA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15565122 32 - 23502949 GCGCGGGGGGTACCGCGAGCACGAGGCGGGGA i colAng1.NW_012114488v1 C 0 I 51 s calJac3.chr4 169833695 29 + 171630274 GCTCGGGGTGA-CCACGTggtgggggggga-- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1251754 28 - 2905041 GCGCGGGGTGA-CCCAGTGGTGAGGGCGG--- i saiBol1.JH378287 C 0 C 0 e otoGar3.GL873575 10922064 178 - 12073884 I e aotNan1.NW_018494782v1 1456380 1091 - 1813869 I e cebCap1.NW_016107695v1 1207746 348 - 2164891 I e dasNov3.JH569188 493914 1032 + 760995 I e canFam3.chr1 56139035 807 + 122678785 I e nomLeu3.chr3 156252987 511 + 157873769 I e panPan2.chr6 171746134 529 + 173848474 M a score=18315.000000 s hg38.chr6_KB021644v2_alt 29715 5 + 185823 CAGAG s panTro5.chr6 173496153 5 + 175400573 CGGAG i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11432994 5 - 12463322 CGGAG i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170284838 5 + 172585720 TGGAG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169030442 5 - 170955103 TGGAG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8317698 5 + 10161646 TGGAG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1347343 5 + 3144229 CGGAG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96626499 5 + 98384682 CGGAG i chlSab2.chr13 C 0 I 229 s manLeu1.NW_012106474v1 8169381 5 - 10857215 CGGAG i manLeu1.NW_012106474v1 C 0 M 1821 s calJac3.chr4 169833724 5 + 171630274 tggag i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1251782 5 - 2905041 TGTGG i saiBol1.JH378287 C 0 C 0 e otoGar3.GL873575 10922064 178 - 12073884 I e aotNan1.NW_018494782v1 1456380 1091 - 1813869 I e cebCap1.NW_016107695v1 1207746 348 - 2164891 I e dasNov3.JH569188 493914 1032 + 760995 I e colAng1.NW_012114488v1 15565154 51 - 23502949 I e canFam3.chr1 56139035 807 + 122678785 I e nomLeu3.chr3 156252987 511 + 157873769 I e panPan2.chr6 171746134 529 + 173848474 M a score=-29221.000000 s hg38.chr6_KB021644v2_alt 29720 50 + 185823 GGTCG----------------------------------------G----GGGGAC-GCGTGCACGA------GGCAGGGA--TGGAGCCTGGGGCGGGGGGA- s panTro5.chr6 173496158 46 + 175400573 GGTCG----------------------------------------G----GGGGACCGCGTGCACGA------GGCAGGGG--CGGAGC-----GCGGGGGGA- i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11432999 51 - 12463322 GGC------------------------------------------G----GGGGACCGCGTGCACGA------GGCGGGGATCCGGGGCGGGGAGGGGGGGGG- i gorGor5.CYUI01015032v1 C 0 I 5 s rheMac8.chr4 170284843 42 + 172585720 ---TGCA--------------------------------------G----GGAGATCCTGTGTAGGA------GGCTGGGA--CTGAGT--------GTGGGG- i rheMac8.chr4 C 0 I 4 s macFas5.chr4 169030447 45 - 170955103 ---TGCA--------------------------------------G----GGAGATCCTGTGTAGGAGGCTGGGACTGAGT--GTGGGG-----------GGA- i macFas5.chr4 C 0 I 1 s macNem1.NW_012011000v1 8317703 45 + 10161646 ---TGTA--------------------------------------G----GGGGATCCTGTGTAGGA------GGCTGGGA--CTGAGT-----GTGGGGGGA- i macNem1.NW_012011000v1 C 0 I 1 s cerAty1.NW_012002071v1 1347348 46 + 3144229 ---TGCAGGGGGATCCTGTGTAGGAGGCTGGGACGGAGTGTGGGGG---------------------------GAC---------------------------- i cerAty1.NW_012002071v1 C 0 C 0 s calJac3.chr4 169833729 39 + 171630274 ---------------------------------------------gggctggtgaccgcgtg-gcga------ggg--------ggggt-----gtggggtgac i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1251787 44 - 2905041 ---------------------------------------------G----GGTGACCGCGTGCACTG------GGGGAAAGAGTGGGGT-----GTGGGGTGTC i saiBol1.JH378287 C 0 C 0 e otoGar3.GL873575 10922064 178 - 12073884 I e aotNan1.NW_018494782v1 1456380 1091 - 1813869 I e cebCap1.NW_016107695v1 1207746 348 - 2164891 I e dasNov3.JH569188 493914 1032 + 760995 I e colAng1.NW_012114488v1 15565154 51 - 23502949 I e canFam3.chr1 56139035 807 + 122678785 I e chlSab2.chr13 96626504 229 + 98384682 I e nomLeu3.chr3 156252987 511 + 157873769 I e manLeu1.NW_012106474v1 8169386 1821 - 10857215 M e panPan2.chr6 171746134 529 + 173848474 M a score=69700.000000 s hg38.chr6_KB021644v2_alt 29770 48 + 185823 C-GCGTGCACGAGGCGGGGATGGAGCCTGGGGC-GGGGGGAC-GCGTGCAC s panTro5.chr6 173496204 45 + 175400573 CCGCGTGCACGAGGCAGGGGCGGAG-----AGC-GGGGGGACCGCGTGCAC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171746685 48 + 173848474 -CGCGTGCACGAGGCGGGGACGCAGCCTGGGGC-GGGGGGAC-GCGTGCAC i panPan2.chr6 M 529 C 0 s gorGor5.CYUI01015032v1 11433055 27 - 12463322 -CGCGTGCACGAGGCGGGGG--------------GGGGGGGC--------- i gorGor5.CYUI01015032v1 I 5 C 0 s rheMac8.chr4 170284889 44 + 172585720 -CGAGTGCATGAGGCGGGGACAGAG-----CGC-AGGGGGCTTGTGTGCAC i rheMac8.chr4 I 4 C 0 s macFas5.chr4 169030493 44 - 170955103 -CGAGTGCATGAGGCGGGGACAGAG-----CGC-AGGGGGCTTGTGTGCAC i macFas5.chr4 I 1 C 0 s macNem1.NW_012011000v1 8317749 44 + 10161646 -CGAGTGCATGAGGCGGGGACAGAG-----CGC-AGGGGGCTTGTGTGCAC i macNem1.NW_012011000v1 I 1 C 0 s cerAty1.NW_012002071v1 1347394 44 + 3144229 -CGAGTGCATGAGGCGGGGACAGAG-----CGC-AGGGGGGTTGTGTGCAC i cerAty1.NW_012002071v1 C 0 C 0 s calJac3.chr4 169833768 46 + 171630274 -cgtgtgcac--agaggggatggagtggggtgt-ggggtgacc-cgtgcgc i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1251831 47 - 2905041 -CGCGTGCAC---GGGGGGATGGAGTGGGGTGTGGGGGTGACCACGTGCAC i saiBol1.JH378287 C 0 C 0 e otoGar3.GL873575 10922064 178 - 12073884 I e aotNan1.NW_018494782v1 1456380 1091 - 1813869 I e cebCap1.NW_016107695v1 1207746 348 - 2164891 I e dasNov3.JH569188 493914 1032 + 760995 I e colAng1.NW_012114488v1 15565154 51 - 23502949 I e canFam3.chr1 56139035 807 + 122678785 I e chlSab2.chr13 96626504 229 + 98384682 I e nomLeu3.chr3 156252987 511 + 157873769 I e manLeu1.NW_012106474v1 8169386 1821 - 10857215 M a score=45913.000000 s hg38.chr6_KB021644v2_alt 29818 74 + 185823 --GAGGCGGGGACG------------------------------------------------------------------------GAGCGTGGGGG-GACCGCG--AGCACGAGGC-GGGGACGCAGCGCGGGGGG-ACCGCGTGCATGAGG s panTro5.chr6 173496249 60 + 175400573 --GAGGCAGGGGCG------------------------------------------------------------------------GAGCGCGGGGGCGACCGCGTCAGCACGAGGC-GGGGATGGAGCCTGGGG------------------ i panTro5.chr6 C 0 C 0 s panPan2.chr6 171746733 75 + 173848474 --GAGGCGGGGACG------------------------------------------------------------------------GAGCGTCGGGGGGACCGTG--TGCAGGAGGC-GGGGACTGAACGTGGGGGG-ACCGCGAGCACGAGG i panPan2.chr6 C 0 T 123 s gorGor5.CYUI01015032v1 11433082 62 - 12463322 ---AGAGGGGGACG------------------------------------------------------------------------GG--GTCGGGGGGGCCGCG--TGCACGAGGCAGGGGATGGAGCCCGGGG------------TTGGGG i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170284933 145 + 172585720 --GAGGCGGAGACGGAGCGTGGGGAGACCATGTGCATGAGGCGGGGACAGAACTC--GAGGGGACCACGTGCACGAGGCGGGGACGGAGCGTGGGGG-GATCCTG--TGTATGAGGC-TGGGACGGAGTGTGGGGGGGACCGAGTGCATGAGG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169030537 109 - 170955103 --GAGGCGGAGACGGAGCGTGGGGAGACCACGTGCATGAGGCGGGGACA-------------------------------------GAACTCGAGGG-GACCACG--TGCACGAGGC-GGGGACGGAGCGTGGGGGGATCCT-GTGTATGAGG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8317793 145 + 10161646 --GAGGCGGAGACGGAGCGTGGGGAGACCATGTGCATGAGGCGGGGACAGAA--CTCGAGGGGACCACGTGCACGAGGCGGGGACGGAGCGTGGGGG-GATCCTG--TGTATGAGGC-TGGGACAGAGTGTGGGGGGGACCGAGTGCATGAGG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1347438 74 + 3144229 --GAGGCGGGGACG------------------------------------------------------------------------GAGCGTGGGGG-GACCGAG--TGCACGAGGT-GGGGACAGAGCGTGGGGGG-ACCGCGTGCATGAGG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96626733 74 + 98384682 --GAGGCTGGGACG------------------------------------------------------------------------GAGTGTGGGGG-AACCGAG--TGCATGAAGT-GGGGACGGAGCATGGGGGG-ACCGCGTGCACAAGG i chlSab2.chr13 I 229 C 0 s calJac3.chr4 169833814 39 + 171630274 gggaggacggggtg------------------------------------------------------------------------gggtgtggggatgacc-ca--tgtgcgg--------------------------------------- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1251878 39 - 2905041 AGGGGGACGGAG-G------------------------------------------------------------------------AAATGTGGGGGTGACCGCA--TGCACGG--------------------------------------- i saiBol1.JH378287 C 0 C 0 e otoGar3.GL873575 10922064 178 - 12073884 I e aotNan1.NW_018494782v1 1456380 1091 - 1813869 I e cebCap1.NW_016107695v1 1207746 348 - 2164891 I e dasNov3.JH569188 493914 1032 + 760995 I e colAng1.NW_012114488v1 15565154 51 - 23502949 I e canFam3.chr1 56139035 807 + 122678785 I e nomLeu3.chr3 156252987 511 + 157873769 I e manLeu1.NW_012106474v1 8169386 1821 - 10857215 M a score=10856.000000 s hg38.chr6_KB021644v2_alt 29892 22 + 185823 C-GGGGACAGAG-----GGTCGGG------------------------------------GGGA s panTro5.chr6 173496309 8 + 175400573 --------------------CGGG------------------------------------GGGA i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11433144 19 - 12463322 ----GGGGGGGG-----GGACGGG------------------------------------GGGC i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170285078 22 + 172585720 T-GGGGACGGAG-----CGTGGGG------------------------------------GGAC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169030646 58 - 170955103 C-TGGGACAGAG-----TGTGGGGGGGACCGAGTGCATGAGGCGGGGACGGAGCGTGGGGGGAC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8317938 22 + 10161646 C-GGGGACGGAG-----CGTGGGG------------------------------------GGAC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1347512 22 + 3144229 C-GGAGACGGAG-----TGTGGGG------------------------------------GGAC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96626807 23 + 98384682 TGGGGGATGGAG-----TGTGGGG------------------------------------GGAC i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169833853 26 + 171630274 --ggggacagagtggggtgtgggg------------------------------------gTGA i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1251917 25 - 2905041 --GGGGACGGAG-GGGATGTGGGG------------------------------------GTGA i saiBol1.JH378287 C 0 C 0 e otoGar3.GL873575 10922064 178 - 12073884 I e aotNan1.NW_018494782v1 1456380 1091 - 1813869 I e cebCap1.NW_016107695v1 1207746 348 - 2164891 I e dasNov3.JH569188 493914 1032 + 760995 I e colAng1.NW_012114488v1 15565154 51 - 23502949 I e canFam3.chr1 56139035 807 + 122678785 I e nomLeu3.chr3 156252987 511 + 157873769 I e manLeu1.NW_012106474v1 8169386 1821 - 10857215 M e panPan2.chr6 171746808 123 + 173848474 T a score=47472.000000 s hg38.chr6_KB021644v2_alt 29914 39 + 185823 C-GCGTGCACGAGGCGGGGATGGAGCC-TGGGGCGGGGGGA s panTro5.chr6 173496317 40 + 175400573 CCGCGTGCACGAGGCGGGGATGGAGCC-TGGGGCGGGGGGA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171746685 39 + 173848474 -CGCGTGCACGAGGCGGGGACGCAGCC-TGGGGCGGGGGGA i panPan2.chr6 T 123 C 0 s gorGor5.CYUI01015032v1 11433163 39 - 12463322 -CGCGTGCACGAGGC-GGGATGGAGCCGTGGGGGGGGGGGC i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170285100 34 + 172585720 -CGCGTGCATGAGGCAGGCACGGAGCT------CGAGGGGA i rheMac8.chr4 C 0 I 1 s macFas5.chr4 169030704 34 - 170955103 -CGCGTGCATGAGGCAGGCACGGAGCT------CGAGGGGA i macFas5.chr4 C 0 I 1 s macNem1.NW_012011000v1 8317960 34 + 10161646 -CGTGTGCATGAGGCGGGGACGGAGCT------CGAGGGGA i macNem1.NW_012011000v1 C 0 I 1 s cerAty1.NW_012002071v1 1347534 9 + 3144229 -CGAGTGCAC------------------------------- i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96626830 34 + 98384682 -CGTGTGCATGAGGCGGGCACGGAGCT------CGAGGGGA i chlSab2.chr13 C 0 I 1 s calJac3.chr4 169833879 40 + 171630274 CC-CGTGCATGAGGGGGGGACGGAGTGGCATGTGGGGGTGA i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1251942 11 - 2905041 CCACGTGCACG------------------------------ i saiBol1.JH378287 C 0 C 0 e otoGar3.GL873575 10922064 178 - 12073884 I e aotNan1.NW_018494782v1 1456380 1091 - 1813869 I e cebCap1.NW_016107695v1 1207746 348 - 2164891 I e dasNov3.JH569188 493914 1032 + 760995 I e colAng1.NW_012114488v1 15565154 51 - 23502949 I e canFam3.chr1 56139035 807 + 122678785 I e nomLeu3.chr3 156252987 511 + 157873769 I e manLeu1.NW_012106474v1 8169386 1821 - 10857215 M a score=131323.000000 s hg38.chr6_KB021644v2_alt 29953 59 + 185823 C---GCGTGCATGAGGCGGGGACGGAGCG-CGGGGGGAC-GCGTGCACGAGGCGGGGACGGAGC s panTro5.chr6 173496357 61 + 175400573 CC--GCGTGCACGAGGCGGGGACGGAGCG-TGGGGGGACCGTGTGCAGGAGGTGGGGACTGAAC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171746724 61 + 173848474 C---GCGTGCACGAGGCGGGGACGGAGCGTCGGGGGGACCGTGTGCAGGAGGCGGGGACTGAAC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11433202 24 - 12463322 C---GCGTGCACGAGGC-------------------------------------GGGACTGAGC i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170285135 60 + 172585720 C---GCGGGCAGGAGGTGGGGACGGAGCG-TGGGGGGATCCTGTGTACGAGGCTGGGACGGAGT i rheMac8.chr4 I 1 C 0 s macFas5.chr4 169030739 60 - 170955103 C---GCGGGCAGGAGGTGGGGACGGAGCG-TGGGGGGATCCTGTGTACGAGGCTGGGACGGAGT i macFas5.chr4 I 1 C 0 s macNem1.NW_012011000v1 8317995 60 + 10161646 C---GCGTGCAGGAGGTGGGGACGGAGCG-TGGGGGGATCCTGTGTATGAGGCTGGGACGGAGT i macNem1.NW_012011000v1 I 1 C 0 s cerAty1.NW_012002071v1 1347543 51 + 3144229 ------------CAGGTGGGGACGGAGCG-TGGGGGGACCGCGTGCATGAGGCGGGGACGGAGG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96626865 60 + 98384682 C---GCGTGCACGAGGTGGGGATGGAGCG-TGGGGGAATCCTGTGTACGAGGCTGGGACGGAGC i chlSab2.chr13 I 1 C 0 s colAng1.NW_012114488v1 15565205 59 - 23502949 C---GCGTGCATGAGGTGGGGACAGAGCG-CAGGGGGGTCGTGTGCACGAGGC-GGGACGGAGC i colAng1.NW_012114488v1 I 51 C 0 s calJac3.chr4 169833919 59 + 171630274 -CCCGTGCGTGGGGGGACGGAGTGGGGTG-TGGGGGTGACCCGTGCGTGGG---GGGACGGAGT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1251953 29 - 2905041 ----------GGGGGGACGGAGTGGGGTG-CGGGGGTGTC------------------------ i saiBol1.JH378287 C 0 C 0 e otoGar3.GL873575 10922064 178 - 12073884 I e aotNan1.NW_018494782v1 1456380 1091 - 1813869 I e cebCap1.NW_016107695v1 1207746 348 - 2164891 I e dasNov3.JH569188 493914 1032 + 760995 I e canFam3.chr1 56139035 807 + 122678785 I e nomLeu3.chr3 156252987 511 + 157873769 I e manLeu1.NW_012106474v1 8169386 1821 - 10857215 M a score=36025.000000 s hg38.chr6_KB021644v2_alt 30012 7 + 185823 GTGGGGG--- s panTro5.chr6 173496418 7 + 175400573 GTGGGGG--- i panTro5.chr6 C 0 C 0 s panPan2.chr6 171746785 7 + 173848474 GTGGGGG--- i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11433226 7 - 12463322 GTGGGGG--- i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170285195 7 + 172585720 GTGGGGG--- i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169030799 7 - 170955103 GTGGGGG--- i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8318055 7 + 10161646 GTGGGGG--- i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1347594 7 + 3144229 GTGGGGG--- i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96626925 7 + 98384682 GTGGGGG--- i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8171255 7 - 10857215 GTGGGGG--- i manLeu1.NW_012106474v1 M 1821 C 0 s colAng1.NW_012114488v1 15565264 7 - 23502949 GTGGGGG--- i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169833978 7 + 171630274 ---GGGGTGT i calJac3.chr4 C 0 I 6 e otoGar3.GL873575 10922064 178 - 12073884 I e saiBol1.JH378287 1251982 0 - 2905041 C e aotNan1.NW_018494782v1 1456380 1091 - 1813869 I e cebCap1.NW_016107695v1 1207746 348 - 2164891 I e dasNov3.JH569188 493914 1032 + 760995 I e canFam3.chr1 56139035 807 + 122678785 I e nomLeu3.chr3 156252987 511 + 157873769 I a score=266103.000000 s hg38.chr6_KB021644v2_alt 30019 38 + 185823 GACCGCGAGCACGAGGGCGTCGGCTGCTGGGATTTGAA s panTro5.chr6 173496425 38 + 175400573 GACCGCGAGCACGAGGGCGTCGGCTACTGGGATTTGAA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171746792 38 + 173848474 GACCGCGAGCACGAGGGCGTCGGCTGCTGGGATTTGAA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11433233 38 - 12463322 GACCGCGAGCACGAGGGCGTCGGCTGCTGGGATTTGAA i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170285202 38 + 172585720 GACCACGTGCACGAGGGCGACGGCTGCTGGGATTTGAA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169030806 38 - 170955103 GACCACGTGCACGAGGGCGACGGCTGCTGGGATTTGAA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8318062 38 + 10161646 GACCACGTGCACGAGGGCGACTGCTGCTGGGATTTGAA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1347601 38 + 3144229 GACCGCGTGCACGAGGGCGACGGCTGCTGGGATTTGAA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96626932 38 + 98384682 CACCCCGTGCACAAGGGCAATGGCTGCTGGGATTTGAA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8171262 38 - 10857215 GGCCGCGTGCACGAGGGCGACGGCTGCTGGGATTTGAA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15565271 38 - 23502949 GACCGCGTGCACGAGGGCGACGGCTGCTGGGATTTGAA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169833991 38 + 171630274 TGACCCGTGCACAGGGGTGCCGGCTATTGGGATTTGAA i calJac3.chr4 I 6 C 0 s saiBol1.JH378287 1251982 35 - 2905041 ---CGCGTGCACGGGGGAGACGGATGCTGGGATTTGAA i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1208094 38 - 2164891 GACCGCGTGCACGGGGGCGCCGGCTGCTGGGATTTGAA i cebCap1.NW_016107695v1 I 348 I 172 e otoGar3.GL873575 10922064 178 - 12073884 I e aotNan1.NW_018494782v1 1456380 1091 - 1813869 I e dasNov3.JH569188 493914 1032 + 760995 I e canFam3.chr1 56139035 807 + 122678785 I e nomLeu3.chr3 156252987 511 + 157873769 I a score=483644.000000 s hg38.chr6_KB021644v2_alt 30057 86 + 185823 GGAAGCTCTATAAAGCGAGGGAGC--AGGGACCC-----CCGTTCCTGCCGGGGGTGCCGGGGTGGGGAAAGCACAGAATCTTCTTGAGGCCC s panTro5.chr6 173496463 86 + 175400573 GGAAGCTCTATAGAGCGAGGGAGC--AGGGACCC-----CCGTTCCTGCCGGGGGTGCCGGGGTGGGGAAAGCACAGAATCTTCTTGAGGCCC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171746830 86 + 173848474 GGAAGCTCTATAGAGCGAGGGAGC--AGGGACCC-----CCGTTCCTGCCGGGGGTGCCGGGGTGGGGAAAGCACAGAATCTTCTTGAGGGCC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11433271 86 - 12463322 GGAAGCTCTATAAAGCGAGGGAGC--AGGGACCC-----CCGTTCCTGCCGGGGGTGCCGGGGTGGGGAAAGCACAGAATCTTCTTGAGGCCC i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170285240 86 + 172585720 GGAAGCCCTATAGAGCGAGGGAGC--AGGGACCC-----CCTTTCCTGCCAGGGGTGCCAGGGTGGGGAAAGCACAGAACCTTCGTGAGGCCC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169030844 86 - 170955103 GGAAGCCCTATAGAGCGAGGGAGC--AGGGACCC-----CCTTTCCTGCCAGGGGTGCCAGGGTGGGGAAAGCACAGAACCTTCGTGAGGCCC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8318100 86 + 10161646 GGAAGCCCTATAGAGCGAGGGAGC--AGGGACCC-----CCTTTCCTGCCAGGGGTGCCGGGGTGGGGAAAGCACAGAACCTTCGTGAGGCCC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1347639 86 + 3144229 GGAAGCCCTATAGAGCGAGGGAGC--AGGGACCC-----CCTTTCCTGCCAGGGGTGCCAGGGTGGGGAAAGCACAGAACCTTCGTGAGGCCC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96626970 86 + 98384682 GGAAGCCCTATAGAGCGAGGGAGC--AGGGACCC-----CCTTTCCTGCCAGGGATGCCAGGGTGGGGAAAGCACAGAACCTTCGTGAGGCCC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8171300 85 - 10857215 GGAAGCCCTATAGAGCGAGGGAGC--AGGGACCC-----CCTTTCCTGCCAGGGGTGCCAGGGTGGGGAAAGCACAGAACCTT-GTGAGGCCC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15565309 88 - 23502949 GGTAGCCCTATAGAGTGAGGGAGCAGAGGGACCC-----CCTTTCCTGCCAGGGGTGCCAGGGTGGGGAAAGCACAGAACCTTCGTGAGGCCC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169834029 88 + 171630274 GGAGACAGGATAGGGTGAGGG-GT--ATGGACCCCCATTCCGTTCCTGCCCGAGGGGATGGGGTGGGG--AGCACACGCCCTTTGTGGGGCAC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1252017 87 - 2905041 GGAGACACTATAGGGCGAGGG-GC--ACGGACCTCAGTTCCGTTCCTGCCCGAGGAGAC-AGGTGGGG--AGCACACGCCCTTCGTGGGGCCC i saiBol1.JH378287 C 0 C 0 e otoGar3.GL873575 10922064 178 - 12073884 I e aotNan1.NW_018494782v1 1456380 1091 - 1813869 I e cebCap1.NW_016107695v1 1208132 172 - 2164891 I e dasNov3.JH569188 493914 1032 + 760995 I e canFam3.chr1 56139035 807 + 122678785 I e nomLeu3.chr3 156252987 511 + 157873769 I a score=231337.000000 s hg38.chr6_KB021644v2_alt 30143 39 + 185823 TGGGCTGAGTGAGGGGC--------GCACAGGAGGCGGGAGCTGCAC--- s panTro5.chr6 173496549 39 + 175400573 TGGGCTGAGTGAGGGGC--------GCACAGGAGGCGGGAGCTGCAG--- i panTro5.chr6 C 0 C 0 s panPan2.chr6 171746916 39 + 173848474 TGGGCTGAGTGAGGGGC--------GCACAGGAGGCGGGAGCTGCAG--- i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11433357 39 - 12463322 TGGGCTGAGTGAGGGGC--------GCACAGGAGGCAGGAGCTGCAG--- i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170285326 39 + 172585720 TGGACTGAGTGAGGGGC--------GCACAGGAGGCGGGAGCTGCAG--- i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169030930 39 - 170955103 TGGACTGAGTGAGGGGC--------GCACAGGAGGCGGGAGCTGCAG--- i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8318186 39 + 10161646 TGGACTGAGTGAGGGGC--------GCACAGGAGGCGGGAGCTGCAG--- i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1347725 39 + 3144229 TGGGCTGAGTGAGGGGC--------GCACAGGAGGCGGGAGCTGCAG--- i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96627056 39 + 98384682 TGGGCTTAGTGAGGGGC--------GCACAGGAGGCGGGAGCTGCAG--- i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8171385 39 - 10857215 TGGGCTGAGTGAGGGGC--------GCACAGGAGGCGGGAGCTGCAG--- i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15565397 39 - 23502949 TGGGCTGAGTGAGGGGC--------GCACAGGAGGCGGGAGCTGCAG--- i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169834117 33 + 171630274 TGGGCTG-----CAGGT--------GCACA-GCGTGGGGCGCTGCGG--- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1252104 34 - 2905041 TGGGCTG-----GGGGC--------TCACAGGCGTCGGGCGCTGCGG--- i saiBol1.JH378287 C 0 C 0 s otoGar3.GL873575 10922242 47 - 12073884 tgggctgagagaggggaggtgggtggcaga-gagaagggag--gcaggtg i otoGar3.GL873575 I 178 C 0 e aotNan1.NW_018494782v1 1456380 1091 - 1813869 I e cebCap1.NW_016107695v1 1208132 172 - 2164891 I e dasNov3.JH569188 493914 1032 + 760995 I e canFam3.chr1 56139035 807 + 122678785 I e nomLeu3.chr3 156252987 511 + 157873769 I a score=258113.000000 s hg38.chr6_KB021644v2_alt 30182 48 + 185823 GGGTGACTGT-GGGGTGGCGGCC------------GTGGCCAGAGCGCAGGGAGGGAGACG----------- s panTro5.chr6 173496588 48 + 175400573 GGGTGACCGT-GGGGTGGCGGCC------------GTGGCCAGAGCGCAGGGAGGGAGACG----------- i panTro5.chr6 C 0 C 0 s panPan2.chr6 171746955 48 + 173848474 GGGTGACCGT-GGGGTGGCGGCC------------GTGGCCAGAGCGCAGGGAGGGAGACG----------- i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11433396 48 - 12463322 GGGTGACCGT-GGGGTGGCGGTC------------GTGGCCAGAGCGCAGGGAGGGAGACG----------- i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156253498 47 + 157873769 GGGTGACCCT-GGGA-AGCGGCC------------GTGGCCAGAGCGCAGGGAGGGAGACG----------- i nomLeu3.chr3 I 511 C 0 s rheMac8.chr4 170285365 48 + 172585720 CGGTGACCGT-GGAGAGGCGGCC------------CTGGCCAGAGCGCAGGGAGGGACAGG----------- i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169030969 48 - 170955103 CGGTGACCGT-GGAGAGGCGGCC------------CTGGCCAGAGCGCAGGGAGGGACAGG----------- i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8318225 48 + 10161646 CGGGGACCGT-GGAGAGGCGGCC------------CTGGCCAGAGCGCAGGGAGGGACAGG----------- i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1347764 48 + 3144229 CGGTGACCGT-GGAGAGGCGGCC------------CTGGCCAGAGCGCAGGGAGGGACAGG----------- i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96627095 48 + 98384682 CCGTGACCGT-GGAGAGGCGGCC------------CTGGCCAGAGCGCAGGGAGGGACAGG----------- i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8171424 48 - 10857215 CGGTGACCGT-GGAGAGGCGGCC------------CTGGCCGGAGCGCAGGGAGGGACAGG----------- i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15565436 48 - 23502949 CGGTGACCGT-GGAGAGGCGGCC------------CTGGCCAGAGCGCAGGGAGGGACAGG----------- i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169834150 44 + 171630274 GGGCAGCCGT--GGGAGACGCAG------------GTGTCTGGAGCGCAGGGAGGAGC-------------- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1252138 58 - 2905041 GGGCGTCCTCCGGGGAGACCCCGCGGTGGCCCGTCGTGTCCGGAGTGCAGGGAGGAGC-------------- i saiBol1.JH378287 C 0 C 0 s otoGar3.GL873575 10922289 57 - 12073884 ggctgagaga-ggggaggtgg--------------gtgggctgagagaggggaggtaggtggcagagagaag i otoGar3.GL873575 C 0 C 0 e aotNan1.NW_018494782v1 1456380 1091 - 1813869 I e cebCap1.NW_016107695v1 1208132 172 - 2164891 I e dasNov3.JH569188 493914 1032 + 760995 I e canFam3.chr1 56139035 807 + 122678785 I a score=336367.000000 s hg38.chr6_KB021644v2_alt 30230 38 + 185823 GGAGGCCACCCGGCTG-CCGGGTTTCCTCCTGGAGGCTC s panTro5.chr6 173496636 38 + 175400573 GGAGGCCACCCGGCTG-CCGGGTTTCCTCCTGGAGGCTC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171747003 38 + 173848474 GGAGGCCACCCGGCTG-CCGGGTTTCCTCCTGGAGGCTC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11433444 38 - 12463322 GGAGGCCACCTGGCTG-CCGGGTTTCCTCCTGGAGGCTC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156253545 38 + 157873769 GGAGGCAGCCCGGCTG-CCGGGTTTCCTCCTGGAGGCTC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170285413 37 + 172585720 GGAGGCCGCCCGGCTG--CGGGTTTCCTCCTGGAGGCTC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169031017 37 - 170955103 GGAGGCCGCCCGGCTG--CGGGTTTCCTCCTGGAGGCTC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8318273 37 + 10161646 GGAGGCCGCCCGGCTG--CGGGTTTCCTCCTGGAGGCTC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1347812 37 + 3144229 GGAGGCCGCCCGGCTG--CGGGTTTCCTCCTGGAGGCTC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96627143 37 + 98384682 GGAGGCCGCCCGGCTT--CGGGTTTCCTCCTGGAGGCTC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8171472 37 - 10857215 GGAGGCCGCCCGGCTG--CGGGTTTCCTCCTGGAGGCTC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15565484 37 - 23502949 GGAGGCCGCCCGGCTG--CGGGTTTCCTCCTGGAGGCTC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169834194 38 + 171630274 GGAGGCCGCCCGGCTG-CGGAGTTTCCTCTTGGGTGCGC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1252196 39 - 2905041 GGAGGCCGCCCGGTTGCCAGGGTTTCCTCCTGGACGCCC i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1208304 39 - 2164891 GGAGGCCGCCCGGCTGCCAGGGTTTCCTCCTGGGCGCCC i cebCap1.NW_016107695v1 I 172 C 0 s aotNan1.NW_018494782v1 1457471 39 - 1813869 GGAGGCCGCCGGGCTGCCAGGGTTTCCTCTTGGGCGCCC i aotNan1.NW_018494782v1 I 1091 C 0 s otoGar3.GL873575 10922346 22 - 12073884 ggaggc-----aggTG-CCTGGGTCCCT----------- i otoGar3.GL873575 C 0 C 0 e dasNov3.JH569188 493914 1032 + 760995 I e canFam3.chr1 56139035 807 + 122678785 I a score=803328.000000 s hg38.chr6_KB021644v2_alt 30268 91 + 185823 CGTGGCCATTTTCCTGAGCTAGAAAACGGGCCCACGCC----ATCAAGGTGGGGACAGGCCCGGGCTCCCTTCTTGTTTTGAATAAAGACCATGT s panTro5.chr6 173496674 91 + 175400573 CGTGGCCATTTTCCTGAGCTAGAAAACCGGCCCACGCC----ATCAAGGTGGGGACAGGCCCGGGCTCCCTTCTTGTTTTGAATAAAGACCATGT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171747041 91 + 173848474 CGTGGCCATTTTCCTGAGCTAGAAAACCGGCCCACGCC----ATCAAGGTGGGGACAGGCCCGGGCTCCCTTCTTGTTTTGAATAAAGACCATGC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11433482 91 - 12463322 CGTGGCCATTTTCCTGAGCTAGAAAACCGGCCCACGCC----ATCAAGGTGGGGACAGGCCCGGGCTCCCTCCTGGTTTTGAATAAAGACCATGT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156253583 89 + 157873769 CGTGGCCG-TTTCCTGAGCTAGAAAAC-GGCCCACGCC----TTCAAGGTGGGGACAGGCCCGGGCTCCCTTCTTTTTTTGAAAAAAGACCATGT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170285450 91 + 172585720 CGTGGGCATTTTCCTGAGCTGGAAAACGGACCCGCGCC----ATCAAGGTGGGGACAGGCCCGGGTTCCCTTCTTTTTTTGAATAAAGACCATGT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169031054 91 - 170955103 CGTGGGCATTTTCCTGAGCTGGAAAACGGACCCGCGCC----ATCAAGGTGGGGACAGGCCCGGGTTCCCTTCTTTTTTTGAATAAAGGCCATGT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8318310 91 + 10161646 CGTGGGCATTTTCCTGAGCTGGAAAACGGACCCGCGCC----ATCAAGGTGGGGACAGGCCCGGGTTCCCTTCTTTTTTTGAATAAAGACTATGT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1347849 91 + 3144229 CGTGGGCATTTCCCTGAGCTGGAAAACGGACCCACGCC----ATCAAGGTGGGGACAGGCCCGGGCTCCCTTCTTTTTTTGAATAAAGACCATGT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96627180 91 + 98384682 CGTGGGCATTTTCCTGAGCTGGAAAACGGACCCGCACC----ATCAAGGTGGGGACAGGCCCGGGCTCCCTTCTTTTTTTGAATAAAGACCATGT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8171509 91 - 10857215 CGTGGGCATTTTCCTGAGCTGGAAAACGGACCCACACC----ATCAAGGTGGGGACAGGCCCGGGCTCCCCTCTTTTTTTGAATGAAGACCATGT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15565521 91 - 23502949 CGTGGGCATTTTCCTGAGCTGGAAAACGGACCCGCGCC----ATCAAGGTGGGGACAGGCCCGGGCTCTCTTCTTTTTTTGAATAAAGACCATGT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169834232 89 + 171630274 TGTGGGCATCTTCCTGGGCTAG-AAACGGGGCCACACC----ATGGAGGTGGGGACGGG-CCGGGCTCCCTTCTTTTTCTGGAAAAAGACCATGT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1252235 88 - 2905041 TGCGGGCATTTTCCTGGGC--G-AAACGGGGCCACGCC----ATGGAGGTGGGGACAGGCCCGGGCTCCCTTCTTTTTCTGGAGAAAGACCCTGC i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1208343 88 - 2164891 TGT-GGCATTTTCCTGGGCTGG-AAACGGGGCCACGCC----ATTGAGGTGGGGACAGG-CCGGGCTCCCTTCTTTTTCTGGGTAAAGACCATGT i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1457510 90 - 1813869 TGTGCGCATTTTCCTGGGCTGG-AAACGGGGCCACGCC----ATGGAGGTGGGGACAGGCCCGGGCTCCCTTCTTTTCCTGGATAAAGAGCATGT i aotNan1.NW_018494782v1 C 0 I 53 s otoGar3.GL873575 10922368 47 - 12073884 -----------------GCAGGGGAAC----------------------TGAGGACAGTTAGGGGCATCCC---------GAGTGAAACCTGCAC i otoGar3.GL873575 C 0 C 0 s dasNov3.JH569188 494946 88 + 760995 CATAGGCATTCTTCTAACCATGAAAA---ATCAGCACCTCAAATTGAGTTGAGGACTGGTCTGGGG---CTTATTTCTTTGGGTAAAAACTATT- i dasNov3.JH569188 I 1032 C 0 e canFam3.chr1 56139035 807 + 122678785 I a score=45660.000000 s hg38.chr6_KB021644v2_alt 30359 5 + 185823 TTTCC s panTro5.chr6 173496765 5 + 175400573 TTTCC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171747132 5 + 173848474 TTTCC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11433573 5 - 12463322 TTTCC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156253672 5 + 157873769 TTTCC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170285541 5 + 172585720 TTTCC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169031145 5 - 170955103 TTTCC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8318401 5 + 10161646 TTTCC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1347940 5 + 3144229 TTTCC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96627271 5 + 98384682 TTTTC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8171600 5 - 10857215 TTTCC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15565612 5 - 23502949 TTTCC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169834321 5 + 171630274 ACTCC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1252323 5 - 2905041 ACTCC i saiBol1.JH378287 C 0 I 6 s cebCap1.NW_016107695v1 1208431 5 - 2164891 ACTCC i cebCap1.NW_016107695v1 C 0 I 29 s otoGar3.GL873575 10922415 4 - 12073884 -CTCC i otoGar3.GL873575 C 0 I 4 s dasNov3.JH569188 495034 5 + 760995 TTTCC i dasNov3.JH569188 C 0 C 0 e aotNan1.NW_018494782v1 1457600 53 - 1813869 I e canFam3.chr1 56139035 807 + 122678785 I a score=205199.000000 s hg38.chr6_KB021644v2_alt 30364 33 + 185823 ACGT-GGCGTAAGACATGGCGTGATGACACTTAA s panTro5.chr6 173496770 33 + 175400573 ACGT-GGCATAAGACATGGCGTGATGACACTTAA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171747137 33 + 173848474 ACGT-GGCATAAGACATGGCGTGATGACACTTAA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11433578 33 - 12463322 ACGT-GGCATAAGACATGGCGCGATGACACTTAA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156253677 34 + 157873769 ACGTGGGCATAAGACATGACGTGATGACGCTTAA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170285546 33 + 172585720 ACGC-GGCACAAAACATGGCGTGATGACACTTAA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169031150 33 - 170955103 ACGC-GGCACAAAACATGGCGTGATGACACTTAA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8318406 33 + 10161646 ACGC-GGCACAAAACATGGCGTGATGACACTTAA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1347945 33 + 3144229 ACGC-GGCACAAAACATGGCGTGATGACACTTAA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96627276 33 + 98384682 ACGC-GGCACAAAACATGGCCTGATGACACTTAA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8171605 33 - 10857215 ACGC-GGCACAAAACATGGCGTGATGACACTTAA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15565617 33 - 23502949 ACGC-GGCACAAAACATGGCGTGATGACACTTGA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169834326 29 + 171630274 CCGC-AGCGTAAGGAATGGC--GGTGACGCTT-- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1252334 29 - 2905041 CCGC-AGCGTGAGGAACGGC--GACGAGGCTT-- i saiBol1.JH378287 I 6 C 0 s otoGar3.GL873575 10922423 33 - 12073884 CTGT-GAGGAGAGGAAAGGCATGCTAACATTTAC i otoGar3.GL873575 I 4 C 0 s dasNov3.JH569188 495039 33 + 760995 CTGT-TGCTGAAGGAAGGGCATGATGCCATTTTA i dasNov3.JH569188 C 0 C 0 e aotNan1.NW_018494782v1 1457600 53 - 1813869 I e cebCap1.NW_016107695v1 1208436 29 - 2164891 I e canFam3.chr1 56139035 807 + 122678785 I a score=162014.000000 s hg38.chr6_KB021644v2_alt 30397 21 + 185823 CTTCGCACTACTAAAAATACC s panTro5.chr6 173496803 21 + 175400573 CTTCGCACTACTAAAAATACC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171747170 21 + 173848474 CTTCGCACTACTAAAAATACC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11433611 21 - 12463322 CTTCGCACTACTAAAAATACC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156253711 21 + 157873769 CTTCGCACTACTAAAAATACC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170285579 21 + 172585720 CTTCGCACTACTAAAAATACT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169031183 21 - 170955103 CTTCGCACTACTAAAAATACT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8318439 21 + 10161646 CTTCGCACTACTAAAAATACT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1347978 21 + 3144229 CTTCGCACTACTAAAAATACT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96627309 21 + 98384682 CTTCGCACTACTAAAGATACT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8171638 21 - 10857215 CTTCGCACTACTAAAAATACT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15565650 21 - 23502949 CTTCGCGCTACTAAAAATACT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169834355 19 + 171630274 -CCCGCGC-ACTGACAGTGCT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1252363 15 - 2905041 -CCCGCA-----GTAAGTGCT i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1208465 18 - 2164891 --CTGCGC-ACTAACAGTGCT i cebCap1.NW_016107695v1 I 29 C 0 s otoGar3.GL873575 10922456 21 - 12073884 CTCCACACTGCTGAGAACACT i otoGar3.GL873575 C 0 C 0 s dasNov3.JH569188 495072 21 + 760995 TTTTGCACTACTGAAAGCACT i dasNov3.JH569188 C 0 C 0 e aotNan1.NW_018494782v1 1457600 53 - 1813869 I e canFam3.chr1 56139035 807 + 122678785 I a score=1090472.000000 s hg38.chr6_KB021644v2_alt 30418 110 + 185823 TTAAGAGATACTTATCTTGTTTAAATAATTTGGAATTATGGCTCCACA-TTAAAGAAAACAAACTCCAAGCAACAGCTTTTCTTTCTCTCCTTCCCTTGTGAGGTCCGCCG s panTro5.chr6 173496824 110 + 175400573 TTAAGAGATACTTATCTTGTTTAAATAATTTGGAATTATGGGTCCACA-TTGAAGAAAACAAACTCCAAGCTACAGCTTTTCTTTCTCCCCTACCCTTGTGAGGTCCGCCG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171747191 110 + 173848474 TTAAGAGATACTTATCTTGTTTAAATAACTTGGAATTATGGGTCCACA-TTAAAGAAAACAAACTCCAAGCAACAGCTTTTCTTTCTCCCCTACCCTTGTGAGGTCCGCCG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11433632 110 - 12463322 TTAAGAGATACTTATCTTGTTTAAATAATTTGGAATTATGGGTCCACA-TTAAAGAAAACAAACTCCAAGCAACAGCTTTTCTTTCTCCCCTACCCTTGTGAGGTCCGCCG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156253732 110 + 157873769 TTAAGAGATACTTATCTTGTTTAAATAATTTGGAATTATGGGTCCACA-GTAAAGAAAACAGACTCCAAGCAACAGCTTTTCTTTCGCCCCTACCCTTGTGAGGTCCGCCG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170285600 110 + 172585720 TGAAGAGATACTTATCTTGTTTAAATAATTTGGAATTATGGGTCCACA-TTAAAGAAAACAGACTCTAAACAACAGCTTTTCTTTCTCCTCTACCCTTGTGAGGTCAACCG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169031204 110 - 170955103 TGAAGAGATACTTATCTTGTTTAAATAATTTGGAATTATGGGTCCACA-TTAAAGAAAACAGACTCTAAACAACAGCTTTTCTTTCTCCTCTACCCTTGTGAGGTCAACCG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8318460 110 + 10161646 TGAAGAGATACTTATCTTGTTTAAATAATTTGGAATTATGGGTCCACA-TTAAAGAAAACAGACTCTAAACAACAGCTTTTCTTTCTCCTCTACCCTTGTGAGGTCAACCG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1347999 110 + 3144229 TGAAGAGATACTTATCTTGTTTAAATAATTTGGAATTATGGGTCCACA-TTAAAGAAAATAGACTCTAAACAACAGCTTTTCTTTCTCCTCTACCCTTGTGAGGTCAACCG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96627330 110 + 98384682 TTAAGAGATACTTATCTTGTTTAAATAATTTGGAATTATGGGTCCACA-TTAAAGAAAACAGACTCTAAGCAACAGCTTTTCTTTCTCCTCTACCCTTGTGAGGTCAACCG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8171659 109 - 10857215 TGAAGAGATACTTATCTTGTTTAAATAATTTGGAATTATGGGTCCACA-TTAAAGAAAACAGACTCTAAACAACAGCTTTTCTTTCTCCTCTACCCTTGTGAGGTCAA-CG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15565671 110 - 23502949 TTAAGAGATACTTATCTTGTTTAAATAATTTGGAATTATGGGTCCACA-TGAAAGAAAACAGACTCTAAGCAACAGCTTTTCTTTCTCCTCTACCCTTGTGAGGTCAACCG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169834374 110 + 171630274 TTGGGAGATGCTTACCTTGTTTAAATAATTAGGAATTTCGGGTCCTCA-TTAAAGAAAACAGACTCCAGGCAACAGCTTTTCTTTCCCTCCCGCCCGGGTGAGGTCAGCGG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1252378 106 - 2905041 TTAGGAGATGCTTCTCTTGTTTAAATAATTAGGAATGACGCGTCCACA-GGAAAGAAAACAGGCTCCAGGCCACAGCTTTCCTTTCTCTCCGGCCCTTGCGAGGTC----G i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1208483 109 - 2164891 TTAGGAGATGCTTATCTT-TTTAAATAATTAGGAATTAGGGGTCCACA-TTAAAGAAAACAGGCTCCAGGCAACAGCTTTTCTTTCTCTCCCGCCCTTGTGAGGTCAGCCG i cebCap1.NW_016107695v1 C 0 I 184 s aotNan1.NW_018494782v1 1457653 109 - 1813869 TTAGGAGATGCTTATCTCGTTTAAATAATGAGGAATTACGGGTCCACA-TTAAAGAAAAGAGACTCCAGGCAACAGCTTTTCTTTCTCTCCCGCCCTTGTGAGGTCAGCG- i aotNan1.NW_018494782v1 I 53 C 0 s otoGar3.GL873575 10922477 77 - 12073884 ---------------------TTCATACCTGGAGATTACTGGTCTACA-CTGAAGAAAGGGGGCTCCCAGC------------TTCCCCTCCCCACCCCTAAGACCAGCCA i otoGar3.GL873575 C 0 C 0 s dasNov3.JH569188 495093 104 + 760995 TTGAGATA-------CTTGTTTAAGTGATTTAAAATTCCCGGTCCACATTTAGAGAAAACAGACTCAAGGAAAATTCTTTTCCTCTGCCTCCACCCTTACGCGGTCAGCCA i dasNov3.JH569188 C 0 C 0 e canFam3.chr1 56139035 807 + 122678785 I a score=712088.000000 s hg38.chr6_KB021644v2_alt 30528 111 + 185823 GCAAACCACCAATGTTTCCGTATTCAAGGCCAAAATACCCTAGGGAGGGACCGGACTCCTTTTATTCTTTAC----ATAGCATTGTCAGTGTTTGGGGACATTGGAAGGAAGCTA s panTro5.chr6 173496934 111 + 175400573 GCAAACCACCAATGTTTCTGTATTCAAGGCCAAAATACCCTAGGGAGGGACCGGACTCCTTTTATTCTTTAC----ATAGCATTGTCAGTGTTTGGGGACATTGGAAGGAAGCTA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171747301 111 + 173848474 GCAAACCACCAATGTTTCTGTATTCAAGGCCAAAATACCCTAGGGAGGGACCGGACTCCTTTTATTCTTTAC----ATAGCATTGTCAGTGTTTGGGGACATTGGAAGGAAGCTA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11433742 111 - 12463322 GCAAACCACCAATGTTTCCGTATTCAAGGCCAAAATACCCTAGGGAGGGACCGGACTCCTTTTATTCTTTAC----ATAGCATTGTCAGTGTTTGGGGACATTGGAAGGAAGCTA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156253842 102 + 157873769 GCAAACCACCAATGTTTCTGTATTCAAGGCCAAAATACCCTAGGGAGGGACCGGACCCCTTTTATTCTTTAC----ATAGCATTGTCAGTGTTTGGGGACCTTAG---------A i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170285710 102 + 172585720 GCAAACCACCAAGGTTACTGTATTCAAGGTCAAAATACCCTAGGGAGGGACCGAAGTCCTTGTATTCTTTAC----ATAGCATTGTCAGTGTTTGGGGACCTTGG---------A i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169031314 102 - 170955103 GCAAACCACCAAGGTTACTGTATTCAAGGTCAAAATACCCTAGGGAGGGACCGAAGTCCTTGTATTCTTTAC----ACAGCATTGTCAGTGTTTGGGGACCTTGG---------A i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8318570 102 + 10161646 GCAAACCACCAAGGTTACTGTATTCAAGGTCAAAATACCCTAGGGAGGGACCGAAGTCCTTGTATTCTTTAC----ATAGCATTGTCAGTGTTTGGGGACCTTGG---------A i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1348109 102 + 3144229 GCGAACCACCAAGGTTACTGTATTCAAGGTCAAAATACCCTAGGGAGGGACCGAAGTCCTTGTATTCTTTAC----ATAGCATTGTCAGTGTTTGGGGACCTTGG---------A i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96627440 102 + 98384682 GCAAACCACCAAGGTTTCTGTATTGAAGGTCAAAATACCCTAGGGAGGGACCGAAGTCCTTTTATTCTTTAC----ATAGCATTGTCAGTGTTTGGGGACCTTGG---------A i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8171768 102 - 10857215 GCAAGCCACCAAGGTTACTGAATTCAAGGTCAAAATACCCTAGGGAGGGACCAAAGTCCTTGTATTCTTCAC----ATAGCATTGTCAGTGTTTGGGGACCTTGG---------A i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15565781 102 - 23502949 GCTAACCGCCAAGGTTTCTGTATTCAAGGTCAAAATGCCCTAGGGAGGGACCGAAGTCCTTTTATTCTTTGC----ATAGCATTGTCAGTGTTTGGGGACCTTGG---------A i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169834484 97 + 171630274 GCAAACGGCCAGCGTTTCTGTATTCA---CCAGAACGCCCCAGGGAGGGCC--GAGGCCTTCCATTCTTTGC----ATAGTATTGTGAGTGTCTGGGGGCCCTGG---------A i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1252484 49 - 2905041 GCAAAC-----------------------------CGCCC--------------AGTCCTTCCTTTCTCTGC----AGAGTA-TGTGAGTGTCTGGG------------------ i saiBol1.JH378287 C 0 C 0 s aotNan1.NW_018494782v1 1457762 99 - 1813869 GCAAACCGCCAGCGTTTCTGTATTCAAGGCCAGAATACCC-AGGGAGGGAC--AAGTCCTTCCATTCTTTGC----ATAGTATTGTGAGTGTCTGGGGGCCTGGG---------G i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10922554 81 - 12073884 GCAGCC--CTGGTGTTGCTGTGTTTGCAGCTGAAACCCC---AGAAAAGACTGGGCCC-------------C----GTGGCACCCTCGGTGTCTGGGGTGTC------------A i otoGar3.GL873575 C 0 C 0 s dasNov3.JH569188 495197 115 + 760995 GCACCCCACAAATGTTGCCATATTTGGGGCCAAAAGACTCTAGGAAGTATGGGACTTCTCTTGATACTTTGCTTCTGTAATATTTTCAGTGGTTGGGGATGTTAGAAGAAAACTG i dasNov3.JH569188 C 0 C 0 e cebCap1.NW_016107695v1 1208592 184 - 2164891 I e canFam3.chr1 56139035 807 + 122678785 I a score=350150.000000 s hg38.chr6_KB021644v2_alt 30639 94 + 185823 AGGAAGCTATAGTGACAAACTCCT-GCCACTCTCGCGTT--CAGAGGTCTGCAGGACAGCAGGCT-CGTGA----------------------GCCGGG-GAGCGGGC------TGCATC---------------CCAAAGA s panTro5.chr6 173497045 94 + 175400573 AGGAAGCTATAGTGACAAACCCGT-GCCACTCTCGCATT--CAGAGGTCTGCAGGACAGCAGGCT-TGTGA----------------------GCCGGG-GAGCGGGC------TGCATC---------------CCAAAGA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171747412 94 + 173848474 AGGAAGCTATAGTGACAAACTCCT-GCCACTCTCGCATT--CAGAGGTCTGCAGGACAGCAGGCT-TGTGA----------------------GCCGGG-GAGCGGGC------TGCATC---------------CCAAAGA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11433853 94 - 12463322 AGGAAGCTATAGTGACAAACTCCT-GCCACTCTCGCGTT--CAGAGGTCTGCAGGACAGCAGGCT-TGTGA----------------------GCCGGG-GAGCGGGC------TGCATC---------------CCAAAGA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156253944 89 + 157873769 AGAAAGCTATAGTGA------------CACCCTCGCGTT--CGGAGGTCTGCAGGACAGCAGGCT-TGTGA----------------------GCCGGG-GAGGGAGCGGGCTGTGCTGC---------------TTGGAGA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170285812 85 + 172585720 AGGAAGCTATAGTGACAAACCCCG-GCCACCCTCGCCTT--CGGAGTTCTGCAGGACAACAG----------------------------------AAG-GAGCAGGC----TGTGCTGC---------------TTTGAGA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169031416 85 - 170955103 AGGAAGCTATAGTGACAAACCCCG-GCCACCCTCGCCTT--CGGAGTTCTGCAGGACAACAG----------------------------------AAG-GAGCAGGC----TGTGCTGC---------------TTTGAGA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8318672 85 + 10161646 AGGAAGCTATAGTGACAAACCCCG-GCCACCCTCGCCTT--CGGAGTTCTGCAGGACAACAG----------------------------------AAG-GAGCAGGC----TGTGCTGC---------------TTTGAGA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1348211 85 + 3144229 AGGAAGCTATAGTGACAAACCCCT-GCCACCCTCGCCTT--TGGAGTTCTGCAGGACAACAG----------------------------------AAG-GAGCAGGC----TGTGCTGC---------------TTTGAGA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96627542 96 + 98384682 AGGAAGCTATAGTGACAAACCCCT-GCCACCCTCGCCTT--CGGAGTTCTGCAGGACAGCAGGCT-TGTGA----------------------GCCGGG-GAGCAGGC----TGTGCTGC---------------TTTGAGA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8171870 85 - 10857215 AGGAAGCTATAGTGACAAACCCCT-GCCACCCTCGCCTT--TGGAGTTCTGCAGGACAACAG----------------------------------AAG-GAGCAGGC----TGTGCTGC---------------TTTGAGA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15565883 96 - 23502949 AGGAGGCTGTAGTGATAAACCCCT-GCCACCCTCGCCTT--CGGAGTTCTGCAGGACAGCAGGCT-TGTGA----------------------GCCGGG-GAGCAGGC----TATGCTGC---------------TTTGAGA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169834581 83 + 171630274 CGGAAGCCCTAGTGACAAACTCC--AGCATCCCA-----------GGTCTGCAGGGCGGCAGGCT-TGTGAG-------------------GCGACAGG-GAGCCGCC---------TTC---------------CCACAG- i calJac3.chr4 C 0 I 15 s saiBol1.JH378287 1252533 79 - 2905041 -----GCCCTAGTGACAAACTCCT-GGCACCCGG-----------GGTCTGCAGGACCGCAGGCT-TGTGAG-------------------GCGACAGG-GAGCCGCT---------TTC---------------CCATAG- i saiBol1.JH378287 C 0 I 14 s aotNan1.NW_018494782v1 1457861 86 - 1813869 CGGAAGCCCTAGTGACAAACTCCT-GGCACCCCG----------AGGTCTGCAGGACGGCAGGCT-TGGGAG-------------------GCGACAGGCGAGCCGCT---------TTC---------------CCACAG- i aotNan1.NW_018494782v1 C 0 I 15 s otoGar3.GL873575 10922635 90 - 12073884 GGAGAGCTGCGGGTTCAGGCCCAG-GCCTCCTTCACCTT--CTGGAGGCGGCAGGACAGCAGACTGTGAGC-------------------------AGG-GAGCCGAG------GGCGCC---------------CCAGA-- i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56139842 95 + 122678785 AGGAAGCTGAGGGGACATGTCCCTGGCTGCCCTTGCCCT--GGGAGACCTTGGGGACAGCAGGCTTTGTAAGCG----------------TGGAACTGT-GGGGATGC------TATGGC---------------------- i canFam3.chr1 I 807 I 5 s dasNov3.JH569188 495312 124 + 760995 ---------TAGTGACAAATTCCT-GGCTGCCTTTTCTTTATGGAGTTATTGAGGACAGCAGTAATTGGGAGCAATAGCTGTGGTTAAGCTACACCTGT-CACTAGCT------TGCCACTGAATTGCAGGACAGCTAAAG- i dasNov3.JH569188 C 0 C 0 e cebCap1.NW_016107695v1 1208592 184 - 2164891 I a score=411215.000000 s hg38.chr6_KB021644v2_alt 30733 44 + 185823 TGCCCAGGCTTCCA---------GGTGCCTGAAACCTGCAGGGATCAGTCTAA s panTro5.chr6 173497139 44 + 175400573 TGCCCAGGCTTCCA---------GGTGCCTGAAACCTGCAGGGATCAGTCTAA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171747506 44 + 173848474 TGCCCAGGCTTCCA---------GGTGCCTGAAACCTGCAGGGATCAGTCTAA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11433947 44 - 12463322 TGCCCAGGCTTCCA---------GGTGCCTGAAACCTGCAGGGATCAGTCTAA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156254033 44 + 157873769 TGCCCAGCCTTCCA---------GGTGCCTGAAACCTGCAGGGATCAGTCTAA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170285897 44 + 172585720 TGCCCAGCCTTCCA---------GGTGCCTGAAACCTGCCGGGATCAGTGTAA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169031501 44 - 170955103 TGCCCAGCCTTCCA---------GGTGCCTGAAACCTGCCGGGATCAGTGTAA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8318757 44 + 10161646 TGCCCAGCCTTCCA---------GGTGCCTGAAACCTGCCGGGATCAGTGTAA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1348296 44 + 3144229 TGCCCAGCCTTCCA---------GGTGCCTGAAACCTGCCGGGATCAGTGTAA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96627638 44 + 98384682 TGCCCAGCCTTCCA---------GGTGCCTGAAACCTGCCGGGATCAGTGTAA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8171955 44 - 10857215 TGCCCAGCCTTCCA---------GGTACCTGAAACCTGCCGGGATCAGTGTAA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15565979 44 - 23502949 TGCCCAGCCTTCCA---------GGTGCTTGAAACCTGCTGGGATCAGTGTAA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169834679 44 + 171630274 TGCCGGGGCCTCCA---------GCGGCCCGAGGCCTGCAGGGACCAGCCTAA i calJac3.chr4 I 15 C 0 s saiBol1.JH378287 1252626 40 - 2905041 TGCCCAGGCCTCCA---------GCGGCCTGAAGCCTGCAGGGACCAGT---- i saiBol1.JH378287 I 14 C 0 s cebCap1.NW_016107695v1 1208776 44 - 2164891 TGCCCAGGCCTCCA---------GCGGCCTGAAGCCTGCAGGGATCAGCCTAA i cebCap1.NW_016107695v1 I 184 I 159 s aotNan1.NW_018494782v1 1457962 44 - 1813869 TGCCCAGGCCTCCA---------GCGGCCTGAAGCCTGCAGGGACCAGTCTAA i aotNan1.NW_018494782v1 I 15 C 0 s otoGar3.GL873575 10922725 18 - 12073884 -----------------------------------CTGCGGGGTTCATTCTCA i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56139942 53 + 122678785 TGCCCGTCCCTGGAAGGTGGGATGGCTCCCAAGATATATAGGGACCAGGCCAA i canFam3.chr1 I 5 C 0 s dasNov3.JH569188 495436 44 + 760995 CACAGAAGCTTTTA---------GCTACCCCAAGTGAGTGGTGACCAGTATAA i dasNov3.JH569188 C 0 C 0 a score=1350565.000000 s hg38.chr6_KB021644v2_alt 30777 160 + 185823 TTGCCTTTCTCCACGATACCATTGCTCTTAAGAAGTGTT---------TTGGCAATGACTTTTAACAATAGGACGATGGCTGAGTTCCCAGATCTGCATTACGGAGGCATTTTAAAAGCCCACATCT------TCCTCAGCTACACCGAGTCTC--TCTCCTGATGTCAGTGCTGTG s panTro5.chr6 173497183 160 + 175400573 TTGCCTTTCTCCACGATACCATTGCTCTTAAGAAGTGTT---------TTGGCAATGGCTTTTAACAATAGGACGATGGCTGAGTTCCCAGCTCTGCATTACGGAGGCATTTTAAAAGCCCACATCT------TCCTCAGCTACACGGAGTCTC--TTTCCTGATATCAGTGCTGTG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171747550 160 + 173848474 TTGCCTTTCTCCACGATACCATTGCTCTTACGAAGTGTT---------TTGGCAATGACTTTTAACAATAGGACGATGGCTGAGTTCCCAGCTCTGCATTACGGAGGCATTTTAAAAGCCCACATCT------TCCTCAGCTACACCGAGTCTC--TTTCCTGATGTCAGTGCTGTG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11433991 160 - 12463322 TTGCCTTTCTCCACAATACCATTGCTCTTACGAAGTGTT---------TTGGCAATGACTTTTAACAATAGGACGATGGCTGAGTTCCCAGCTCTGCATTACAGAGGCATTTTAAAAGCCCACGTCT------TCCTCAGCTACACCGAGTCTC--TTTCCTGATGTCAGTGCTGTG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156254077 162 + 157873769 CTGCCTTTCTCCATGATACCATTGCTCTTACGAAGTGTT---------TTGGCAATGACTTTTAACAATAGGACGATGGCTGAGTTCCCAGGTCTGCATTACGGAGGCATTTTAAAAGCCCACATCT------TCCTCAGCTACACTGAGTCTCTTTTTCCTGCTGTCAGTGCTGTG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170285941 162 + 172585720 TTGCCTTTCTCCAGGATACCATTGCTCTTATGAAGTGTT---------TTGGCAATGACTTTTAACAATAGGACGATGGCTGAGTTCCCAGGTCTGCATTACGGAGGCATTTTAAAAGCCCACATCT------TCCTCAGCTACACCGAGCCTCTTTTTCAGGCTGTCAGTGTGGTG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169031545 162 - 170955103 TTGCCTTTCTCCAGGATACCATTGCTCTTATGAAGTGTT---------TTGGCAATGACTTTTAACAATAGGACGATGGCTGAGTTCCCAGGTCTGCATTACGGAGGCATTTTAAAAGCCCACATCT------TCCTCAGCTACACCGAGCCTCTTTTTCAGGCTGTCAGTGTGGTG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8318801 162 + 10161646 TTGCCTTTCTCCAGGATACCATTGCTCTTATGAAGTGTT---------TTGGCAATGACTTTTAACAATAGGACGATGGCTGAGTTCCCAGGTCTGCATTACGGAGGCATTTTAAAAGCCCACATCT------TCCTCAGCTACACCGAGCCTCTTTTTCAGGCTGTCAGTGTGGTG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1348340 161 + 3144229 TTGCCTTTCTCCAGGATACCATTGCTCTTACGAAGTGTT---------TTGGCAATGACTTTTAACAATAGGACGATGGCTGAGTTCCCAGGTCTGCATTACTGAGGCATTTTAAAAGCCCACATCT------TCCTCAGCTACACCGAGCCTCTTTTTCA-GCTGTCAGTGCGGTG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96627682 162 + 98384682 TTGCCTTTCTCCACCATACCATTGCTCTTATGAAGTGTT---------TTGGCAATGACTTTTAACAATAGGACGATGGCTGAGTTCCCAGGTCTGCATTACTGAGGCATTTTAAAAGCCCACATCT------TCCTCAGCTACACCGAGCCTCTTTTTCAGGCTGTCAGTGCGGTG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8171999 162 - 10857215 TTGCCTTTCTCCAGGATACCATTGCTCTTATGAAGTGTT---------TTGGCAATGACTTTTAACAATAGGACGATGGCTGAGTTCCCAGGTCTGCATTACTGAGGCATTTTAAAAGCCCACATCT------TCCTCAGCTACACCGAGCCTCTTTTTCAGGCTGTCAGTGCGGTG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15566023 162 - 23502949 TTGCCTTTCTCCATGATACCATTGCTCTTATGAAGTGTT---------TTGGCAATGACTTTTAACAATAGGACGATGGCTGAGTTCCCAGGTCTGCATTACTGAGGTATTTGAAAAGCCCACATCT------TCCTCAGCTACACCGAGCCTCTTTTTCAGGCTATCAGTGCGGTG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169834723 158 + 171630274 CCGCCCTTCTAAGCGATGCCATTGCTCTTGCAAAGCA-T---------TTGGCCATGATTTTTAACAGTGGA--GACGGCCGAGCTCCCAGGTCTGCATTTCGCTGTCATGTTAAAAGGCCACATCT------TCCGTAGCTAAGCC-AGCCTCTTTTCCCTCCTGTCAGTGCGTCC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1252666 156 - 2905041 ---CCCTTCTAAGCGACACCATTGCTCTTAGGACGCATT---------TTGGCAATGATTTTTAACAATGGG--GATGGCGGAGCTCCCAGCTCTGCATTTCACAGTCATGTTAAAAGGCCGCATCC------TCCTTAGCTAAGCC-AGCCTCGTTTCCCTCCTCTCAGTGCGTCC i saiBol1.JH378287 C 0 C 0 s aotNan1.NW_018494782v1 1458006 159 - 1813869 CCGCCCTTCTAAGCGATACCATTGCTCTTACAAAGCATT---------TTGGCAATGATTTTTAACAATGGA--GATGGCGGAGCTCCCAGGTCTGCATTTTGCAGTCCTGTTGAAAGGCCACATCT------TCCTTAACTAAGCC-AGCCTCTTTTCCCTCCTGTCAGTGCGTCC i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10922743 156 - 12073884 CTGCCTTTCTCCACGATCCTGTCACTCCCACTAAGAATT---------TTGGAAACAATTTTTGAAAATGGGAAAATGGCTGAATCCCTGGTTCAGCATCAC-----CCGCTGGAAAAGCCGGATCTCCTGCCTCCTCAGA-------AGCTCCTTCTCCATCATGTCTTTGCCTCA i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56139995 156 + 122678785 TTACATCTCTCCAGGACATGGCTGGTCTTACGAGTGATTGTAAGACAATTGGCAATGATTTTGTGAAATGGGATGACTGCTCTGTCCTCAGTCCTATATGCTGCTAGCGGCTTGGAAAGCTCGATTT------TCTGTAGCTAC---------------CCAATTGTTACTGTTTAG i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 495480 151 + 760995 TTACATCTATCTAGTATAATACTGCTTTTACAAAGTGTT---------TTGGCAACACTTTCATAAAATGGGGTAATGACTAAGTTCCCAATTCTGTCACAC-CAGACACTTGCAAAGACTGAATCT------TCATCAGGT----------TCTTTTTCAAAAAGTCGTTGCTTTG i dasNov3.JH569188 C 0 C 0 e cebCap1.NW_016107695v1 1208820 159 - 2164891 I a score=268539.000000 s hg38.chr6_KB021644v2_alt 30937 22 + 185823 TGGCTGAAAATCAGCTTTTTTA s panTro5.chr6 173497343 22 + 175400573 TGGCTGAAAATCAGCTTTTTTA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171747710 22 + 173848474 TGGCTGAAAATCAGCTTTTTTA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11434151 22 - 12463322 TGGCTGAAAATCAGCTTTTTTA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156254239 22 + 157873769 TGGCTGAAAATCAGCTTTTTTA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170286103 22 + 172585720 TGGCTGAAAATCAGCTTTTTTA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169031707 22 - 170955103 TGGCTGAAAATCAGCTTTTTTA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8318963 22 + 10161646 TGGCTGAAAATCAGCTTTTTTA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1348501 22 + 3144229 TAGCTGAAAATCAGCTTTTTTA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96627844 22 + 98384682 TGGCTGAAAATCAGCTTTTTTA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8172161 22 - 10857215 TGGCTGAAAATCAGCTTTTTTA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15566185 22 - 23502949 TGGCTGAAAACCAGCTTTTTTA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169834881 22 + 171630274 TGGCTGAAAATTAGCTTTTATA i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1252822 22 - 2905041 TGGCTGAAAATTAGCTTTCATA i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1208979 22 - 2164891 TGGCTGAAAATTAGCTTTTATA i cebCap1.NW_016107695v1 I 159 C 0 s aotNan1.NW_018494782v1 1458165 22 - 1813869 TGGCTGAAAACTAGCTTTTATA i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10922899 20 - 12073884 CTGCTGAAAATTAGCTTCTT-- i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56140151 20 + 122678785 CACTTGAAAATTAGCATTT--A i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 495631 22 + 760995 CAGCTGAAAATTAGCCTTTTCA i dasNov3.JH569188 C 0 I 997 a score=13073.000000 s hg38.chr6_KB021644v2_alt 30959 1 + 185823 G s panTro5.chr6 173497365 1 + 175400573 G i panTro5.chr6 C 0 C 0 s panPan2.chr6 171747732 1 + 173848474 G i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11434173 1 - 12463322 G i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156254261 1 + 157873769 G i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170286125 1 + 172585720 G i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169031729 1 - 170955103 G i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8318985 1 + 10161646 G i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1348523 1 + 3144229 G i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96627866 1 + 98384682 G i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8172183 1 - 10857215 G i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15566207 1 - 23502949 G i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169834903 1 + 171630274 G i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1252844 1 - 2905041 G i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1209001 1 - 2164891 G i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1458187 1 - 1813869 G i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10922919 1 - 12073884 A i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56140171 1 + 122678785 G i canFam3.chr1 C 0 C 0 e dasNov3.JH569188 495653 997 + 760995 I a score=4782124.000000 s hg38.chr6_KB021644v2_alt 30960 390 + 185823 AAGGCCGTTTAATGTAGAGATTTATAGGGCCGCATGAACGCTGCATTTAAGAAGAATTTTTTT---AAAACTATAAAGTATGACATATTTAATGGGGATGGGGCAATGTGATATGATGGCTAAGGCTTTGTAAAACTTTTAAATAAAATTAACACACATAACTTTTAATGCCCCCATGTCAAAGCATCTTAACATTATAAGAAGTAAACACATAAAATCCCATCCCCTTTCAAAGCCGCACTCAAGTTTGGATTCTTAGCTCAGTTTATCAAACGCTTTTTATAAGCCTGGAATGATCACAGAGATGATACTTTTTAATGATGCTAACGTTCTGGTTTGATGTTTTTAATCCAAAGAGGTTAGGAGGTGAAATCTGTACTAACCctattactt s panTro5.chr6 173497366 389 + 175400573 AAGGCCGTTTAATGTAGAGATTTATAGGGCCGCATGAACACTGCATTTAAGA-GAATTTTTTT---AAAACTATAAAGTATGACATATTTAATGGGGACGGGGCAATGTGATATGATGGCTAAGGCTTTGTAAAACTTTTAAATAAAATTAACACACATAACTTTTAATGCACCCATGTCAAAGTATCTTAAAATTATAAGAAGTAAACACATAAAATCCCATCCCCTTTCAAAGCCGCACTGAAGTTTGGATTCTTAGCTCAGTTTATCAAACGCTTTTTATAAGCCTGGAATGATCACAGAGATGATACTTTTTAATGATGCTAACGTTCTGGTTTGATGTTTTTAATCCAAAGAGGTTAGGAGGTGAAATCTGTACTAACCctattactt i panTro5.chr6 C 0 C 0 s panPan2.chr6 171747733 389 + 173848474 AAGGCCGTTTAATGTAGAGATTTATAGGGCCGCATGAACACTGCATTTAAGA-GAATTTTTTT---AAAACTATAAAGTATGACATATTTAATGGGGACGGGGCAATGTGATATGATGGCTAAGGCTTTGTAAAACTTTTAAATAAAATTAACACACATAACTTTTAATGCACCCATGTCAAAGCATCTTAAAATTATAAGAAGTAAACACATAAAATCCCATCCCCTTTCAAAGCCACACTCAAGTTTGGATTCTTAGCTCAGTTTATCAAACGCTTTTTATAAGCCTGGAATGATCACAGAGATGATACTTTTTAATGATGCTAACGTTCTGGTTTGATGTTTTTAATCCAAAGAGGTTAGGAGGTGAAATCTGTACTAACCctattactt i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11434174 390 - 12463322 AAGGCCGTTTAATGTAGAGATTTATAGGGCCGCATGAACACTGCATTTAAGAAGAATTTTTTT---AAAACTATAAAGTATGACATATTTAATGGGGATGGGGCAATGTGATATGATGGCTAAGGCTTTGTAAAACTTTTAAATAAAATTAACACACATAACTTTTAATGCACCCATGTCAAAGCATCTTAAAATTATAAGAAGTAAACACATAAAATCCCATCCCCTTTCAAAGCCGCACTCAAGTTTGGATTCTTAGCTCAGTTTATCAAACGCTTTTTATAAGCCTGGAATGATCACAGAGATGATACTTTTTGATGATGCTAACGTTCTGGTTTGATGTTTTTAATCCAAAGAGGTTAGGAGGTGAAATCTGTACTAGCCctattactt i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156254262 387 + 157873769 AAGGCCGTTTAATGTAGAGATTTATAGGGCCGTGTAAATACTGCATTTAAGAAGAATTTTTTT---AAAACTATAAAGTATGACATATTTAATGGGG-TGGGGCAATGTGATATGATGGCTAAGGCTTTGTAAAACTTTTAAATAAAATTA--ACACATAACTTTTAATGCACCCATGTCAAAGCATCTTAAAATTATAAGAAGTAAACACATAAAATCCCATCCCCTTTCAAAGCCTCACTCAAGTTTGGATTCTTAGCTTAGTTTATCAAACGCTTTTTATAAGCCTGGAATGATCACAGAGATGATACTTTTTAATGATGCTAACGTTCTAGTTTGATATTTTTAATCCAAAGAGGTTAGGAGGTAAAATCTGTACTAACCctattactt i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170286126 391 + 172585720 AAGGCCGTTTAATGTAGTTATTTATAGGGCTGCATAAACACTGCATTTAAGAAGAATTTTTTA-AAAAAACTATAAAGTATGACATATTTAATAGGGATGGGGCAATGCGATATGATTGCTAAGGCTTTGTAAAACTTTTAAATAAAATTAACACACATAAC-TTTAATGCACCCATGCCACAGCATCTTAAAATCATAAGAAGTAAACACATAAAATCCCATCCCCTTTCAAAGCCGCACTCAAGTTTGGATTCTTAGCTCAGTTTATCAAACGCTTTTTATAAGCCTGGAATGATCACAGAGATGGTAGTTTTTAGTGATGCTAACATTCTGGTTTGATGTTTTTAATCCAGAGAGGTTAGGAGGTGAAATCTGTACTAACCctattactt i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169031730 391 - 170955103 AAGGCCGTTTAATGTAGTTATTTATAGGGCTGCATAAACACTGCATTTAAGAAGAATTTTTTA-AAAAAACTATAAAGTATGACATATTTAATAGGGATGGGGCAATGCGATATGATTGCTAAGGCTTTGTAAAACTTTTAAATAAAATTAACACACATAAC-TTTAATGCACCCATGCCACAGCATCTTAAAATCATAAGAAGTAAACACATAAAATCCCATCCCCTTTCAAAGCCGCACTCAAGTTTGGATTCTTAGCTCAGTTTATCAAACGCTTTTTATAAGCCTGGAATGATCACAGAGATGGTAGTTTTTAGTGATGCTAACATTCTGGTTTGATGTTTTTAATCCAGAGAGGTTAGGAGGTGAAATCTGTACTAACCctattactt i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8318986 391 + 10161646 AAGGCCGTTTAATGTAGTTATTTATAGGGCTGCATAAACACTGCATTTAAGAAGAATTTTTTT-AAAAAACTATAAAGTATGACATATTTAATAGGGATGGGGCAATGCGATATGATTGCTAAGGCTTTGTAAAACTTTTAAATAAAATTAACACACATAAC-TTTAATGCACCCATGCCACAGCATCTTAAAATCATAAGAAGTAAACACATAAAATCCCATCCCCTTTCAAAGCCGCACTCAAGTTTGGATTCTTAGCTCAGTTTATCAAACGCTTTTTATAAGCCTGGAATGATCACAGAGATGGTAGTTTTTAGTGATGCTAACATTCTGGTTTGATGTTTTTAATCCAGAGAGGTTAGGAGGTGAAATCTGTACTAACCctattactt i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1348524 390 + 3144229 AAGGCCGTTTAATGTAGTTATTTATAGGGCTGCATAAACACTGCAATTAAGAAGAATTTTTTT---AAAACTATAAAGTACGACATATTTAATAGGGATGGGGCAATGTGATATGATTGCTAAGGCTTTGTAAAACTTTTAAATGAAATTAACACACATAACTTTTAATGCACCCATGCCACAGCATCTTAAAATCATAAGAAGTAAACACATAAAATCCCATCCCCTTTCAAAGCCGCACTCAAGTTTGGATTCTTAGCTCAGTTTATCAAACGCTTTTTATAAGCCTGGAATGATCACAGAGATGGTAGTTTTTAGTGATGCTAACATTCTGGTTTGATGTTTTTAATCCAGAGAGGTTAAGAGGTGAAATCTGTACTAACCctattactt i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96627867 393 + 98384682 AAGGCCGTTTAATGTAGTTATTTATAGGGCTGCATAAACACTGCATTTAAGAAGATTTTTTTTAAAAAAACTATAAAGTATGGCATATTTAATAGGGATGGGGCAATGTGATATGATTGCTAAGGCTTTGTAAAACTTTTAAATAAAATTAACACACATAACTTTTAATGCACCCATGCCACAGCATCTTAAAATCATAAGAAGTAAACACATAAAATCCCATCCCCTTTCAAAGCCGCACTCAAGTTTGGATTCTTAGCTCAGTTTATCAAACGCTTTTTATAAGCCTGGAATGATCACAGAGATGGTACTTTTTAGTGATGCTAACGTTCTGGTTTGATGTTTTTAATCCAGAGAGGTTAGGAGGTGAAATCTGTACCAACCctattactt i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8172184 390 - 10857215 AAGGCCGTTTAATGTAGTTATTTATAGGGCTGCATAAACACTGCATTTAAGAAGAATTTTTTT---AAAACTATAAAGTACGACATATTTAATAGGGATGGGGCAATGCGATATGATTGCTAAGGCTTTGTAAAACTTTTAAATGAAATTAACACACATAACTTCTAATGCACCCATGCCACAGCATCTTAAAATCATAAGAAGTAAACACATAAAATCCCATCCCCTTTCAAAGCCGCACTCAAGTTTGGATTCTTAGCTCAGTTTATCAAACGCTTTTTATAAGCCTGGAATGATCACAGAGATGGTAGTTTTTAGTGATGCTAACATTCTGGTTTGATGTTTTTAATCCAGAGAGGTTAGGAGGTGAAATCTGTACTAACCctattactt i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15566208 390 - 23502949 AAGGCCGTTTAATGTAGTTATTTATAGGGCGGCATAAACACTGCATTTAAGAAGAATTTTTTT---AAAACTATAAAGTATGACATATTTAATAGGGATGGGGCAATGTGATATGATTGCTAAGGCTTTGTAAAACTTTTAAATAAAATTAACACACATAACTTTTAATGCACCCATGCCACAGTATCTTAAAATTATAAGAAGTAAACACATAAAATCCCATCCCCTTTCAAAGCCGCACTCAAGTTTGGATTCTTAGCTCAGTTTATCAAACGCTTTTTATAAGCCTGGAATGATCACAGAGATGGTACTTTTTAATGATGCTAACGTTCTGGTTTGATGTTTTTAATCCAGAGAGGTTAGGAGGTGAAATCTGTACTAACCctattactt i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169834904 378 + 171630274 ACGGCTGGTTAATGTACTGATTTATAGGGCTGCATAAACACTGCATTTAAGAAGAA-AGTTTA---AAAACCATAAAGTATAACATATTTAATGGGGATGGGGCAAACTGATATGATTGCTAGGGCTTTGTAAAACTTTTAAATAAAATGAACACACATAACTTTTAATGCACCCCTGTCAAAGCATCTTAAAATCAT---AAGTAAACACATAAAATCCCA-CCCCTTTCAAAGCTGCACTCAAGTTTAGATTCTTAGCTCAGTTTATCAAAGGCTTTTTGTAAGCTTGGAATGATCACAGAAA---TGCTTTTTAATGACGCTAACGTTCTGGTTTGATG-TTTTAATCC--GGAGGTTAGAAGGTGACCTCTCTGCTAACCctgtt-ctt i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1252845 385 - 2905041 AAGGCTGGTTAATGTATTGATTTATAGGGCTGCGTAAACAC-GCATTTAAGAAGAA-AGTTTA---AAAACTATAAAGTATGACATGTTTAATGGGGATGGGGCAAAGTGATAAGATTGCTAAGGCTTTGTAAAACTTTTAAATAAAATTAACACACGTAACTTTTAATGGACCCCTGTCAAAGCATCTTAAAATCATAAGAAGTAAACATATAAAATCCCGTCCCCTTTCAAAGCTGCACTCAAGTTTAGATTCTTAGCTCAGTTTATCAAACGCTTTTTATAAGCCTGGAATGATCACAGAGA---TACTTTTTAATGATGCTAACGTTCCGGTTTGATGTTTTTAATCCAGAGAGGTTAGCAGGTGACATCTCTTCTAACCCTGTTACTT i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1209002 386 - 2164891 AAGCCTGGTTAATGTATTGATTTATAGGGCTGCATAAACACTGCATTTAAGAAGAA-AGTTTA---AAAACTATAAAGTATGACATATTTAATCGGGATGGGGCAAAGTGATATGATTGCTAAGGCTTTGTAAAACTTTTAAATAAAATTAACACACGTAACTTTTAATGCACCTTTGTCAAAGCATCTTAAAATCATAAGAAGTAAACATATAAAATCCCATCCCCTTTCAAAGCTGCACTCAAGTTTAGATTCTTAGCTCAGTTTATCAAACGCTTTTTATAAGCCTGGAATGATCACAGAGA---TACTTTTTAATGATGCTAACGTTCTGGTTTGATGTTTTTAATCCAGAGAGGTTAGAAGGTGACATCTGTGCTAACCCAGTTACTT i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1458188 386 - 1813869 AAGGCTGGTTAATGTATTGATTTATAGGGCTGCATAAACACTGCATTTAAGAAGAA-AGTTTA---AAAACTATAAAGTATGACATATTTAATGGGGATAGGGCAAAGTGGTATGATTGCTAAGGCTTTGTAAAACTTTTAAATAAAATTAACACACGTAACTTTCAATGCACCCCTGTCAAAGCATCTTAAAATCATAAGAAGTAAACATATAAAATCCCATCCCCTTTCAAAGCTGCACTCAAGTTTAGATTCTTAGCTCAGTTTATCAAACGCTTTTTATAAGCCTGGAATGATCACAGAGA---TATTTTTTAATGATGCTAACGTTCTGGTTTGATGTTTTTAATCCAGAGAGGTTAGAAGGTGACATCTCTGCTAACCCTGTTACTT i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10922920 384 - 12073884 GAGGCCATTTAATGCCGTGATTTATGGGGTTGCATAAACACTGCATTAAAAAAGAA--ATTTA---AAAACGTTCAAGTATGACATGTTTAATGGAGATGGGGAGATGTGATAT-ATCTCTAAGGATTCATAAAAC-TTTAAATAAAATTAACACACATCACTTTTAATACACTTATCTGAAAGCATCTTAAAACTATAAGAAATAAACACATAAAACTTAG--CCCTTTTAAAGCAGCACTAAAGTTTGGATTCTTAGTTTAATTCAGCAAACACTTTTTAGAAGCCTGGAAGGATCATAGAGATAGTATGTTTTTGTGATACTGATGTTCTGGTTTGATGGTTTTAGTCTTGAATAGTTAGGAGGGGAAATCTCCACaaactctgttcctt i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56140172 383 + 122678785 AAGGTCATTTAGTATCGTTATTTATGGAGAAGAATAAACAGTGCACTTAAAA--AATTTTCTA---AAAACTATAAA-TATGACA--TTTAACAGGGATGGAGCAATGAGATGGGATTGCCAAGGCTTCATAAAAC-TTTACATAAAATTAACACACATAGCTTTTAATACACCCCTGGCAAAGCGTCTTAAAATTATAAGAAATAAACACATACAGTCTCAGCCCCTTTTAAAGCTGCAATAAAGCTTGTGTTCTTATCTCAGTTTATCAAATGCCTTTTATAAGCCTGGAATGATCTCAGAGATTGTATGTTTTAATAATACTAATGTTCTTGTTTGATGTTTTCCATCTAAAGAGACCAGAA-GTGAAATCTCTACAAAGTAAATGACTt i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 496650 370 + 760995 AAGGCAATTTTATATGACTATTTATGAGGTCGAATAAACACTGCATTTACAAAGAAATTTATA---AAAACTACAAAGTGTGATGTATTAAATGGAGACGGGG-AATGTGATATGATCATTAA-CCTTCATAAAACT-----------TGAACAAATGTAACATTTAATACACCCATGTCAGGGTGTCTTAAAGTTGTAAGAAATAAGTACATAAAATGTCAGCCCCTTTGAAACCTACACTAGAGTTTCAATTCTTATCCAAGTTTATCAAATGATTTTTATAAACCTGGAACGATTATAAAGA-------TATGGTTAATACTAACATTCTCATTTGACGTTTTCAATCTACTGCAGCTAGAAGGTGAATGCTCTACAAAATATATTTCTT i dasNov3.JH569188 I 997 I 7099 a score=3686165.000000 s hg38.chr6_KB021644v2_alt 31350 399 + 185823 ctgatacgagctcagccgctctggctcggttataagcattgtttgcatggtctgtct-tttcatccttttactctcaacttgt-ttgtgtctttcatcctaaa------gA------CATCCTGCCTCCTcccgttccatgctcacatgtgaccaaatgaagcagacaaaacccgaggctgcttatgaggctgattgcaaagccacagtgcagccaggct-ccctgccccg--agcgtctctgtgctgggacaggctccaggcccctcgagtctgctaagc----ccttccccaagctttagccctgtttcttgtatcactttaattccatttc-ttatctcgacatcttcagcagggaaggctgatttacc--agagaga-gagggagag--agacaggacatgagaacactgTTGCCTGGGGTT s panTro5.chr6 173497755 399 + 175400573 ctgatacgagctcagccgctctggctcggttataagcattgtttgcatggtctgtct-tttcatccttttactctcaacttgt-ttgtgtctttgatcctaaa------gA------CATCCTGCCTCCTcccgttccatgctcacatgtgaccaaatgaagcagacaaaacccgaggctgcttatgaggctgattgcaaagccacagtgcagccaggct-tcctgacccg--agcgtctctgtgctgggacaggctccaggcccctcgagtctgctaagc----ccttccccaagctttagccctgtttcttgtatcactttaattccatttc-ttatctcgacatcttcagcagggaaggctgatttacc--agagaga-gagggagag--agacgggacatgagaacactgttgcctggggtt i panTro5.chr6 C 0 C 0 s panPan2.chr6 171748122 401 + 173848474 ctgatacgagctcagccgctctggctcggttataagcattgtttgcatggtctgtct-tttcatccttttactctcaacttgt-ttgtgtctttgatcctaaa------gA------CATCCTGCCTCCTcccgttccatgctcacatgtgaccaaatgaagcagacaaaacccaaggctgcttatgaggctgattgcaaagccacagtgcagccaggct-ccctgccccg--agcgtctctgtgctgggacaggctccaggcccctcgagtctgctaagc----ccttccccaagctttagccctgtttcttgtatcactttaattccatttc-ttatctcgacatcttcagcagggaaggctgatttaccagagagaga-gagggagag--agacaagacatgagaacactgTTGCCTGGGGTT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11434564 398 - 12463322 ctgatacgagctcagccgctctggctcggttataagcattgtttgcatggtctgtct-tttcatccttttactctcaacttgt-ttgtgtctttgatcctaaa------gA------CATCCTGCCTCCTcccgttccatgctcacatgtgaccaaatgaagcagacaaaacccgaggctgcttatgaggctgattgcaaagccacagtgcagccagtct-ccctgccccg--agcgtctctgtgctgggacaggctccagg-ccctcgagtctgctaagc----ccttccccaagctttagccctgtttcttgtatcactttaattccacttc-ttatctcgacatcttcagcagggaaggctgatttacc--agagaga-gagggagag--agacaggacatgagaacactgttgcctggggtt i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156254649 399 + 157873769 ctgctacgagctcagccgctctggctcggttataaggattgcttgcacggtctgtct-tttcatccttttactctcaacttgt-ttgtgtctttgaacctaaa------AA------CATCCTGCCTTGTcccgttccatgctcacatgtgcccaaaggaagcagacaaaacccgaggctgcttatgaggctgattgcaaagccacggtgccgtcaggct-ccctgccccg--agcctctctgtgctgggacaggctccaggcccctcgagtctgctaagc----ccttccccaagctttagccctgtttcttgtttcactttaattccatttc-ttatctcgacatcttcagcagggaaggccgatttacc--agagaga-gagggagag--agacaggacatgagaacaccgttgcctggggtt i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170286517 399 + 172585720 ctgatatgagctcagccgctctggcttggttataagcattgtttgcatgggctgact-tttcattctcttattcacaacttgt-ttgtgtctttcaacctaaa------gA------CACCCTGTCTCACCCTGTTCCATGCTCACATGTGACCAAACGAAGCAGACAAAACCCGAGGCTGCTTATGAGGCTGATTGCAAAGCCACAGTGCAGCCAGGCT-CCCTGCCCCA--AGCCTCTCTGTGCTGGGACAGGTTCCAGGCCCCTGGAGCCTGCTAAGC----TCTTCCCCAAGCTTTAGCCCTGTTTCTTGTATCactttaattccatttc-ttatctcgacatcttcagcggggcaggccgatttacc--agagagg-gagggaggg--agataggacatgagaacactgtcgcctggggtt i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169032121 399 - 170955103 ctgatatgagctcagccgctctggcttggttataagcattgtttgcatgggctgact-tttcattctcttattcacaacttgt-ttgtgtctttcaacctaaa------gA------CACCCTGTCTCACCCTGTTCCATGCTCACATGtgaccaaacgaagcagacaaaacccgaggctgcttatgaggctgattgcaaagccacagtgcagccaggct-ccctgcccca--agcctctctgtgctgggacaggttccaggcccctggagcctgctaagc----tcttccccaagctttagccctgtttcttgtatcactttaattccatttc-ttatctcgacatcttcagcggggcaggccgatttacc--agagagg-gagggaggg--agataggacatgagaacactgtcgcctggggtt i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8319377 399 + 10161646 ctgatatgagctcagccgctctggcttggttataagcattgtttgcatgggctgact-tttcattctcttattcacaacttgt-ttgtgtctttcaacctaaa------gA------CACCCTGTCTCACCCTGTTCCATGCTCACATGTGACCAAACGAAGCAGACAAAACCCGAGGCTGCTTATGAGGCTGATTGCAAAGCCACAGTGCAGCCAGGCT-CCCTGCCCCA--AGCCTCTCTGTGCTGGGACAGGTTCCAGGCCCCTGGAGCCTGCTAAGC----TCTTCCCCAAGCTTTAGCCCTGTTTCTTGTATCactttaattccatttc-ttatctcgacatcttcagcggggcaggccgatttacc--agagagg-gagggaggg--agataggacatgagaacactgtcgcctggggtt i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1348914 399 + 3144229 ctgatatgagctcagccgctctggcttggttataagcattgtttgcatgggctgact-tttcattctcttattcacaacttgt-ttgtgtctttcaacctaaa------gA------CACCCTGTCTCACCCCGTTCCATGCTCACATGTGACCAAACGAAGCAGACAAAACCCGAGGCTGCTTATGAGGCTGATTGCAAAGCCACAGTGCAGCCAGGCT-CCCTGCCCCA--AGCCTCTCTGTGCCGGGACAGGTTCCAGGCCCCTGGAGCCTGCTAAGC----TCTTCCCCAAGCTTTAGCCCTGTTTCTTGTATCactttaattccatttc-ttatctcaacatcgtcagcggggtaggccgatttacc--agagaga-gagggaggg--agataggacatgagaacactgtcgcctggggtt i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96628260 399 + 98384682 ctgatacaagctcagccgctctggcttggttataagcattgtttgcatggtctgact-tttcattctcttagtctcaacttgt-ttgtgtctttcaacctaaa------gA------CACCCTGTCTCACCCCGTTCCATGCTCACATGTGACCATATGAAgcagacaaaacccgaggctgcttatgaggctgattgcaaagccacagagcagccaggct-ccctgcccca--agcctctctgtgctgggacaggttccagggccctggagcctgctaagc----tcttccccaagctttagccctgtttcttgtatcactttaattccatttc-ttatctccacatcttcagcggggcaggccgatttacc--agagaga-gagggaggg--agataggacatgagaacactgttgcctggggtt i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8172574 399 - 10857215 ctgatatgagctcagccgctctggcttggttataagcattgtttgcatgggctgact-tttcattctcttattcacaacttgt-ttgtgtctttcaacctaaa------gA------CACCCTGTCTCACCCCGTTCCATGCTCACATGTGACCAAACGAAGCAGACAAAACCCGAGGCTGCTTATGAGGCTGATTGCAAAGCCACAGTGCAGCCAGGCT-CCCTGCCCCA--AGCCTCTCTGTGCCGGGACAGGTTCCAGGCCCCTGGAGCCTGCTAAGC----TCTTCCCCAAGCTTTAGCCCTGTTTCTTGTATCactttaattccatttc-ttatctcaacatcgtcagcggggtaggccgatttacc--agagaga-gagggaggg--agataggacatgagaacactgtcgcctggggtt i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15566598 399 - 23502949 ctgatatgagcttagctgctctggcttggttataagcattgtttgcatggtctgact-tttcattctcttattctcaacttgt-ttgtgtctttcaacctaaa------gA------CACCCTGCCTCATcccgttccatgctcacatgtgaccaaacgaagcagacaaaacccgaggctgcttatgaggctgattgcaaagccacagtgcagccaggct-gcctgcccca--agcctctctgtgctggggcaggttccaggcccctggagcctactaagc----tcttccccaagctttagccctgtttcttctatcactttaattccgtttc-ttatctcgacatcttcagcagggtaggctgatttacc--agagaga-gagggaggg--agataggacatgagaatactgTTGCCTGGAGTT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169835282 386 + 171630274 ctgatagcagctcagccgctgcggctgggttgtaagcactgtgtgcacggcctgtctcttccatcctttgactctcaacttgt-ttgtgtctttgaacctaaa------gA------C--CCTGCCTCCTCCCATTCCATGCTCACAT--------GAGAAGCAGAGAAAACGGGGGGCTGCTTATGAGGCTCATTGCAAAGGTCGGGTGCAGCCAGGCT-CCCTGCCCGG--AAC--CTCTGTGCTGGGACAGGCTCCAGG-CCCTCCAGCCTGCTAATAA-TCCTTTCTCCAAGCTTTAGCCCTGTTTCTTGTA-----TTAATTTCATTTC-TTATTTCAATCTCTTCAGCAGGGAAGGCTGATTTAGC--AGAGAGAGGAGAGAGAG--ACACAGGACGCGAGAACTCTGTTGCCTCGTGTT i calJac3.chr4 C 0 I 35 s saiBol1.JH378287 1253230 383 - 2905041 CCGATGGGAGATCGGCCGCTGTGGCTGGGTTATAAGCactgtttgcatggcctgcctcttccatcc-ttgactctcagcttgtcttgggtctttgaacccaaa------gG------C--CCTGCCTCCTCTCATTCCAtgctcaca---------gggaagcagacaagaccgggggctgcttatgaggctgactgcaaaggcc-ggtgcagccaggct-ccttgccccc--agc--ctctgtgctgggacaggctccagg-ccctgcagcctgctaagg-----cctccccaggctttagccctgtttcttgtatcactttagttccatttc-ttatttcaacatcttcagcagggaaggctgatttagc--agcgagaggagagagag----acaggaTGCGAGAACTCTGTTGCCTGGTGTT i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1209388 309 - 2164891 CTGATAGGAGCTCAGCAGCTGTGGCTGGGTTATGAGCactgtttgcatggcctgtctcttccatcctttgactctctacttgt-ttgtgtctttgaacccaaa------gG------C--CCTGCCTCCTCCCATTCCATGCTCACA---------TGGAAGCAGACAAAATGGGGGGCTGCTTCTGAGGCTGATTGCAAAGGCC-GGTGCAGCCAGGCT-CCCTGCCCCC--AGC--CTCTGCAGTGGGACAGG---------------------------------------------AG--------------------------------------TCAacatcttcagcagggaaggctgatttagc--agagagaggagagagag--agataggacatgagaactctgttgcctggtgtt i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1458574 391 - 1813869 CTGACAGGAGCTCAGCCGCTGTGGCTGGGTCATAAGCactgtttgcatggcctgtctcttccatcctttgactctcaacttgt-ttgtgtctttgaacctaag------gG------C--CCTGCCTCCTCCCATTCCATGCTCACAT--------GGGAAgcagacaaaaccgggggctgcttgtgaggctgattgcaaaggccgagtgcagccaggct-ccctgccccg--agc--ctctgtgctgggacaggctccagg-ccctccagcctgctaagc----ccttccccaagctttagccctgtttcttgtatcactctaattccattttgttatttcaacatcttcagcagggaaggctgatttagc--agagagaggagagagagagagacaggacgtgagaactctgttgcctggtgtt i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10923304 382 - 12073884 ctgatgtgaggtcagctgctcag--ttggttttagac----tctgtgtgatctatct-ttccatcctttcacttttgactcat-atgcgtctttgaatcccaa------gagtgtGCCATCCTGCACTGTCCAGTTCCATTCCTCTGCGTGTCTGAGGAAAGCAGACAAAACCCATCACAGTTTATTAGCCTGGGC-CAGAGTCACAG-GCAGCCA-------TTGCCCCACCAGC--TGTTGTGCTGGGACGGGCTTCTGA----TGGCGCCCCCTGAACAGCCCCCTCCTCAAACACGAGGCCTGTTTCTTGCCTCACTTTAATTCTGTTTC-TTGTGTCAACATCTT---TGGAGAAAGCTGATGT-----AGGGGGC-AAGGGAGAG--AGAGAAGGTG---AAACACTGGTGGCCGGGGGC i otoGar3.GL873575 C 0 I 1 s canFam3.chr1 56140555 365 + 122678785 ctgatagtgatttcaccgctgcttctctgttgtgggcact-tttgcatatttt-----ctccatcc-ttcactttcaatctgt-ttgtatctctgaatctcaagtgtTTGA------CATCCAGTATTATCTTATTTCATTcctacgtgtgcc---aagaa--aaacagcacgcacagctgcttatcaggttctctgc--agctgcaggatggccaggccaccccgccccg--ggt--ctctgcacggtggtcagccccaggcctct-acgtctgccgagc-------------------acccttgtttcttgca-cagcttgactttgtcat-ctgtgacagcaccatcagagggtgagggtgatggagc--agagaga------------gacccacacacgggacagacattgcccggggct i canFam3.chr1 C 0 C 0 e dasNov3.JH569188 497020 7099 + 760995 I a score=4593298.000000 s hg38.chr6_KB021644v2_alt 31749 551 + 185823 G-AAAAAACAGTTTTTTTTTCCTGTGTATTTGTACTCCATTTTTTTGTTTTGACAGATTTTGGGGAGTC-----taatttacataacat-aaaattcaccttttttaagtgtgcaattcaatga-ttttcttgtaaatgtaccgcattgt--aa-ccactaccacagtacaattttggaacatttctaccacccgagatgatctctcgcacgcagttgcaggcaatcctcatttccacct-aaggcctggctaacctctcctctaggttttacctccacaa-atgtcttttctggagatttcctatcaacaggatgctgtaaattgtcttctatttttagcttcattcactgagcacagtgct-ttgaggttcaaccccattgtagcacatagtgccttcatctttgttactgaatggcattccatcgcgtggatataccac-agtcatttatggagtcacagg-ggatgagcatttgggttgcttccacttcttagttatgatggctaatggcactatgaacactactgtgcaagtctttatgtggacagaaggttttatttAttt s panTro5.chr6 173498154 551 + 175400573 c-aAAAAATAGTTTTTTTTTCCTGTGTATTTGTACCCCATTTTTTTGTTTTGACAGATTTTGGGGAGTC-----taatttacataacat-aaaattcaccttttttaagtgtgcaattccatga-ttttcttgtaaatgtaccgcattgt--aa-ccactaccacagtacaattttggaacatttctaccacccgagatgatctctcgcacacagttgcaggcaatcctcatttccacct-aaggcctggctaacctctcctctaggttttacctccacaa-atgtcttttctggagatttcctatcaacaggatgccgtaaattgtcttctgtttttagcttcattcactcagcacagtgct-ttgaggttcaaccccattgtagcacatagtgccttcatctttgttactgaatggcattccatcgtgtggatataccac-agtcatttacggagtcacagg-ggatgagcatttgggttgcttccacttcttagttatgatggctaatggcacaatgaacactactgtgcaagtctttatgtggacagaaggttttatttAttt i panTro5.chr6 C 0 C 0 s panPan2.chr6 171748523 550 + 173848474 G-AAAAAATAG-TTTTTTTTCCTGTGTATTTGTACCCCATTTTTTTGTTTTGACAGATTTTGGGGAGTC-----taatttacataacat-aaaattcaccttttttaagtgtgcaattcaatga-ttttcttgtaaatgtaccgcattgt--aa-ccactaccacagtacaattttggaacatttctaccacccgagatgatctctcgcacgcagttgcaggcaatcctcatttccacct-aaggcctggctaacctctcctctaggttttacctccacaa-atgtcttttctggagatttcctatcaacaggatgctgtaaattgtcttctgtttttagcttcattcactcagcacagtgct-ttgaggttcaaccccattgtagcacatagtgccttcatctttgttactgaatggcattccatcgtgtggatataccac-agtcatttacggagtcacagg-ggatgagcatttgggttgcttccactgcttagttatgatggctaatggcactatgaacactactgtgcaagtctttatgtggacagaaggttttatttAttt i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11434962 550 - 12463322 c-aAAAAATAG-TTTTTTTTCCTGTGTATTTGTACCCCATTTTTTTGTTTTGACAGATTTTGGGGAGTC-----taatttacataacat-aaaattcacctgttttaagtgtgcaattcaatga-ttttcttgtaaatgtacagccttgt--aa-ccgctaccacagtacaattttggaacatttctaccatccgagatgatctctcacacccagttgcaggcaatcctcatttccacct-aaggcccggctaacctctcctctaggttttacctccacaa-atgtcttttctggagatttcctatcaacagggtgccgtaaattgtcttctgtttttagcttcattcactcagcacagtgct-ttgaggttcaaccccattgtagcacatggtgccttcatctttgttactgaatggcattccatcgcgtggatataccac-agtcatttacggagtcacagg-ggatgagcatttgggttgcttccacttcttagttatgatggctaatggcactatgaacactactgtgcaagtctttatgtggacagaaggttttatttAttt i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156255048 556 + 157873769 c-aAAAAATAGTTTTTTTTTCCTGTGTATTTGTACCCCATTTTTTTGTTTTGACAGTTTTTGGGGAGTCTAatttaatttacataacat-aaaattcaccttttttaagtgtgcaattcaatga-ttttcttgtaaatgtacagcattgt--ag-ccactaccacagtacaattttagaacatttctaccgcccgggatgatctctcgcatccagttgcaggcaatccgcatttccacct-aagacccggctaacctctcctctaggctttacctccacca-atgtcttttctggagatttcctatcaacaggatgccgtaaattgtcttctgtttttagcttcattcactcagcacagtgct-ttgaggttcaaccccattgtagcacatagtgccttcgtctttgttactgaatgtcactccatcgtgtggctataccac-agtcatttacggagtcccagg-ggatgagcatttgggttgcttccacttcttagttatgatggctaacggcactattaacactactgtgcaagtctttatgtggacagaaggttttatttAttt i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170286916 550 + 172585720 c-aaaaaatag-gtttttcttctgtgtatttgtaccccatttttttgtgttgacAGATTTTGGGGAGTC-----taatttacataacat-aaaattcacctttttaaagtgtgcaattcaataa-ttttcttgtaaatgtacagcgttgt--aa-ccactaccaccgtacaattttagaagatttctaccacccgaggtgatctctcacacccagttacaggcaatcctcatttccacct-aagacccgactaacctctcctctaggttttacctccacaa-atgtcttttctggagatttcctatcaacaggatgccgtacattgtcttctgttgttagcttcattcactcagcacagtgct-ttgaggttcaaccccattgtatcacatagttccttcatttttgttactgaatagcattccatcacggggatataccac-agtcatttatggagtcacggg-ggatgaccctttgggttacttctacttcttagttatgatggctagtggcgctatgaacactactgtgcaagtctttatgtggacagaaggttttatttagtt i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169032520 550 - 170955103 c-aaaaaatag-gtttttcttctgtgtatttgtaccccatttttttgtgttgacAGATTTTGGGGAGTC-----taatttacataacat-aaaattcacctttttaaagtgtgcaattcaataa-ttttcttgtaaatgtacagcgttgt--aa-ccactaccaccgtacaattttagaagatttctaccacccgaggtgatctctcacacccagttacaggcaatcctcatttccacct-aagacccgactaacctctcctctaggttttacctccacaa-atgtcttttctggagatttcctatcaacaggatgccgtacattgtcttctgttgttagcttcattcactcagcacagtgct-ttgaggttcaaccccattgtatcacatagttccttcatttttgttactgaatagcattccatcacggggatataccac-agtcatttatggagtcacggg-ggatgaccctttgggttacttctacttcttagttatgatggctagtggcgctatgaacactactgtgcaagtctttatgtggacagaaggttttatttagtt i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8319776 550 + 10161646 c-aaaaaatag-gttttttttctgtgtatttgtaccccatttttttgtgttgacAGATTTTGGGGAGTC-----taatttacataacat-aaaattcacctttttaaagtgtgcaattcaataa-ttttcttgtaaatgtacagcgttgt--aa-ccactaccaccgtacaattttagaagatttctaccacccgaggtgatctctcacacccagttacaggcaatcctcatttccacct-aagacccggctaacctctcctctaggttttacctccacaa-atgtcttttctggagatttcctatcaacaggatgccgtacattgtcttctgttgttagcttcattcactcagcacagtgct-ttgaggttcaaccccattgtatcacatagttccttcatttttgttactgaatagcattccatcacggggatataccac-agtcatttatggagtcacggg-ggatgaccctttgggttacttctgcttcttagttatgatggctagtggcgctatgaacactactgtgcaagtctttatgtggacagaaggttttatttagtt i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1349313 550 + 3144229 c-aAAAAATAGTTTTTTTTTTCTGTGTATTTGTACCCCATTTTTTTGTGTTGACAGATTTTGGGGAGTC-----taatttacataacat-aaaattcacctttttaaaatgtgcaattcaataa-ttttcttataaatgtacagcattgt--aa-ccactaccaccgtacaattttagaagatttctaccacccgaggtgatctctcacacccagttacaggcaatcctcattgccacct-aagacccggctaacctctcctctaggttttacctccacag-atgtcttttccggagatttcctatcaacaggatgctgtacattgtcttctgttgttagcttcattcactcagcacagtgct-ttgaggttcaaccctattgtgtcacatggttccttcatttttgttactggatagcattccatcac-gggatataccac-agtcatttacggagtcacggg-ggatgaccctttgggttacttctacttcttagttatgatggctagtggcgctatgaacactactgtgcaagtctttatgtggacagaaggttttatttagtt i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96628659 551 + 98384682 caAAAAAATAG-TTTTTTTTTCTGTGTATTTGTACCCCATTTTTTTGTGTTGACAGATTTTGGGGAGTC-----taatttacataacat-aaaattcacctttttaaagtgtgcaattcaataa-ttttcttgtaaatgtacagcgttgt--aa-ctactaccacagtacaattttagaagatttctaccacccgaggtgatctctcacacccagttacaggcaatcctcatttccacct-aagacccggctaacctctcctctaggttttacctccacaa-atgtcttttctggagatttcctatcaacaggatgccgtacactgtcttgtgttgttagcttcattcactcagcacagtgct-ttgaggttcaaccccattgtgtcacatagttccttcatttttgttactgaatagcattccatcacggggatataccac-agtcatttacggagtcatggg-ggatgaccctctgggttacttctacttcttagttatgatggctagtggcgctatgaacactactgtgcaagtctttatgtggatagaagattttatttAGtt i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8172973 550 - 10857215 c-aAAAAATAG-TTTTTTTTTCTGTGTATTTGTACCCCATTTTTTTGTGTTGACAGATTTTGGGGAGTC-----taatttacataacat-aaaattcacctctttaaagtgtgcaattcaataa-ttttcttgtaaatgtacagcgttgt--aa-ccactaccaccgtacaattttagaagatttctaccacccgaggtgatctctcacacccagttacaggcaatcctcattgccacct-aagacccggctaacctctcctctaggttttacctccacag-atgtcttttccggagatttcctatcaacaggatgctgtacattgtcttctgttgttagcttcattcactcagcacagtgct-ttgaggttcaaccctattgtgtcacatggttccttcatttttgttactggatagcattccatcacagggatataccac-agtcatttatggagtcacggg-ggatgaccctttgggttacttctacttcttagttatgatggctagtggcgctatgaacactactgtgcaagtctttatgtggacagaaggttttatttagtt i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15566997 549 - 23502949 C-AAAAAATAG--TTTTTTTTCTGTGTATTTGTACCCCATTTTTTTGTTTtgacagattttggggagtc-----taatttgcataacat-aaaattcacctttttaaagtatgcaattcaataa-ttttcttgtaaatgtacagcgttgt--aa-ccactaccacagtacaattttagaagatttctaccacccgaggtgatctctcacacccagttacaggcaatcctcatttccacct-aagatccggctaacctctcctctaggttttacctccacaa-atgtcttttctggagattgcctgtcaacaggatgcagtacattgtcttctgttgttagcttcattcactcagcacagtgct-ttgaggctcaatcccattgtgtcacatagttccttcatttttgttactgaatagctttccatcacagggatataccgc-agtcatttacggagtcacggg-ggatgacactttgggttacttccacttcttagttatgatggctagtggcgctatgaacactactgtgcaagtctttatgtggacagaaggttttatttagtt i colAng1.NW_012114488v1 C 0 C 0 s saiBol1.JH378287 1253613 547 - 2905041 C-AGGAAATAG--GCTTTTTTCTATTTGTTTGTTTCTCAATATTTTTGTTtgacagcttttggggagtc-----taatttacataacat-aaaattcaccttttttaagcgtgcaattcaatggttttttttataagtgaacagcatggt--aaaccgctaccacaatacaattttagaacatttctaccacccgagaccatctttcacacc--gttacaggcgatcctcatttccacct-aaaacccggctaacctcttctctaagttttaccccaacac-gtgtcatttctggaggtttcctatc-gcaggatgtggtgaattgtcttttgtttttatcttcagtccctcagcaccgtgct-ttagtgttcgaccccactgcagcacacgatgccggcgtcttcgttacagaacagcgttctgtctcctggataaaccac-ggttgttcacggaatcacagg-ggatgagcatttgggctgtttccacttcttagttgttacggctcatggcactatgaacactactgtgcacgtctttatgtgggcat-aggttttatttattt i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1209697 546 - 2164891 c-aggaaatgG--TTTTTTTTCTATTTATTTGTATCTCAATATTTTTGTTTGAcagcttttggggagtc-----taatttacatcacat-aaaattcaccttttttaagcgtgcaattcaatga-ttttcttgtaagcaaacagcatggt--aaactgctaccacaatacaattttagaacatttctaccacccgagacgatctctcgcacccggctacaggcaatcctcatttccacct-aaagcccggctaacctcttctctgagttttactccaacaa-atgccatttctgga-atttcctatc-acaggatgcggtaaattgccttttgttgtt-tcttcattctctcagcactgtgct-ctagggttcgaccccattgccgcacacaatgcctgcgtcttcgttactgaacagcgttctgtctcctggataagccac-agttgttcatggaatcacaag-ggatgggcatttgggctgtttccacttcttagttattatggctcatggcactatgaacactactgtgcacgtctttatgtggacat-aggttttatttAttt i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1458965 543 - 1813869 c-aggaaatag--gtttctttcTATTTATTTGTATCTCAATATTTTTGTTtgacagcttttggggagtc-----taatttacataac---aaaattcacc-tttttaagcgtgcaattcaatga-ttttcttgtaagtgaacagcgtggt--aagccgctaccacggtacaattttagaacatttctaccacccgagacgat-tctcgctcccagttacaggcaatcgtcacttccacgt-agaacctggctaacctcttctctcaggttgaccccaacaa-atgtcgtttctggaggtttcctacc-acagcatgtggtaagttgtcttttgtttttatcttcattcactcagcacggtgct-tgagggttccaccccattgcagcacacaacgcctgcgtcttccttactgaatcgca-tctgtctcctggataaaccac-agttgtcgatggaatcacagg-ggatgagcatctgggctgtttccacgtcttagctattatggctcatggcactatgaacactactgtgcacgtctttatgtggacat-aggttttATTTAttt i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10923687 306 - 12073884 C-AGGGAATGA--TCTCTTTCTATTCTTTTTGTA-CCCAtcttttt------atagcttt--gggggtc-----taatttatataacatgaaaattcacctcttctaagtgtgcaattcaatga--tttgtagtaaatgtgctgttgtac--aa-gccctcccaca-----------------------------CGTTGATCTCTTACACCCGGTTAC---------------------------------------------------------------------CCTCTGGA-------------------GCCGT--------------------------------------GCGCC-TTG---------------------------------------------------------------------------------CCTGTGGGGTCATGGGCCGAGGAACACTTGAGCTGACTTTGGT--TTATTTGTGGTGGGTGATGCCACTGTGAACATTAATATGCATGTCTCTAAGTGGGTACATATTTTCATTTATTC i otoGar3.GL873575 I 1 C 0 s canFam3.chr1 56140920 515 + 122678785 c-aggtaacgg--gctctttcctct-catttgca-ccTGGAATTTTGTTTGaacagctcttttgaggtc-----ggatttacataacgt-aaaattcacctcttttaaacgtacagttcaaagg-atttttaataaatgtattgagttgtgcaa-ccatcaccactatcca----------------accacccaaaatgatctcacgtacctacatttccgc---cctcatttccacctgaagccccaagcaaccacatatctactttttgtctctataatttgccttttctggacatttcatgcaaataggacacagcatattgtcttttgcatttagcttcattcgtttagcgtagaactattcaagttcacc----------cacatggtttatttgtttttattcctgaatagtattccactgtacgggcgtcccatgacttgtttatccattcacaagctggtgaacatttcagttgtttccatgtttgtgttattatgttcaa----------agccctgaggagagagtcttcatgtgagtgtctgtttttactgcttt i canFam3.chr1 C 0 I 1862 e calJac3.chr4 169835668 35 + 171630274 I e dasNov3.JH569188 497020 7099 + 760995 I a score=2281434.000000 s hg38.chr6_KB021644v2_alt 32300 265 + 185823 aattttatttcatagtgaactatacttgacataacacacgtatacaattattatatatg-------tatattt-------tatcagtattgataaaat-------taacacccacaca---gcccatgtcagcatctcaaggttgagaaatgaatcattttcagta-tacaaaacacctctgcataagccatccatgattctatcctcttcattcccaaacagaagtagccattatcctgcttctgggatcataatttccttgcttttctttatggtttattgtacgtgc s panTro5.chr6 173498705 265 + 175400573 aatttcatttcatagtgaactatacttgacataatacatgtatacaattattatatatg-------tatattt-------tatcagtattgataaaat-------taacacccacaca---gcccatgtcagcatctcaaggttgagaaatgaatcattttcagta-tacaaaacacctctgcataaaccatccatcattctgtcctcttcattcccaaacagaagtagccattatcctgcttctgggatcataatttccttgcttttctttatggtttattgtacgtgc i panTro5.chr6 C 0 C 0 s panPan2.chr6 171749073 264 + 173848474 aattttatttcatagtgaactacacttgacataatacacgtatacaattattatatatg-------tatattt-------tatcagtattgataaaat-------taacacccacgca---gcccatgtcagcatctcaaggttgagaaatgaat-attttcagta-tacaaaacacctctgcataaaccatccatcattctatcctcttcattcccaaacagaagtagccattatcctgcttctgggatcataatttccttgcttttctttatggtttattgtacgtgc i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11435512 265 - 12463322 aatttcatttcatagtgaactatacttgacataatacacgtatacaattattatatatg-------tatattt-------tatcagtattgataaaat-------taacacccacgca---gcccatgtcagcatctcaaggttgagaaatgaatcattttcagta-tacaaaacacctctgcataagccatccatgattctatcctcttcattcccaaacagaagtagccattatcctacttctgggatcataatttccttgcttttctttatggtttattgtacgtgc i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156255604 265 + 157873769 aattttatttcatagtgaactatacttgacgtaatacacgtatacaattattatacatg-------tatattt-------tatcagtattgataaaat-------taacacccacgca---gcccatgtcaccatctcaaggttgagaaatgaataattttcagta-tacaaaacacccctgcataagccatccatgattctatcctccgcattcccaaacagaagtagccattatcctgcttctgggatcacaatttccttgcttttctttatggtttattgtatgtgc i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170287466 267 + 172585720 aattttatttcatagtgaactatacttgacataatacatgtataaaattattctatgtgt------tatattt-------tatcagtattgataaaat-------taacacccaagca---gcccatgtcaccatctcaaggttgagaaatgaatcatcttcagtactacaaaacacctctgcataaaccatccatgattctatcctcttccttcccaaacagaactagccattatcctacttctgggatcataaattcctttcttttctttatagtttattgtacatgc i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169033070 267 - 170955103 aattttatttcatagtgaactatacttgacataatacatgtataaaattattctatgtgt------tatattt-------tatcagtattgataaaat-------taacacccaagca---gcccatgtcaccatctcaaggttgagaaatgaatcattttcagtactacaaaacacctctgcataaaccatccatgattctatcctcttccttcccaaacagaactagccattatcctacttctgggatcataaattcctttcttttctttatagtttattgtacatgc i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8320326 267 + 10161646 aattttatttcatagtgaactatacttgacataatacatgtataaaattattctatgtgt------tatattt-------tatcagtattgataaaat-------taacacccaagca---gcccatgtcaccatctcaaggttgagaaatgaatcattttcagtactacaaaacacctctgcataaaccatccatgattctatcctcttccttcccaaacagaactagccattatcctacttctgggatcataaattcctttcttttctttatagtttattgtacatgc i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1349863 267 + 3144229 aattttatttcatagtgaactatacttgacataatacatgtataaaattattctatgtgt------tatattt-------tatcagtattgataaaat-------taacacccacgca---gcccatgtcaccatctcaaggttgagaaatgaatcattttcagtactacaaaacacctctgcataaaccatccaggattctattctcttccttcccaaacagaagtagccattatcctacttctgggatcataatttcctgtcttttctttatagtttattgtacatgc i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96629210 266 + 98384682 aattttatttcatagtgaactatactagacataatacatgtataaaattattctatgtg-------tatgttt-------tatcagtattgataaaat-------taacacccacgca---gcccatgtcaccatctcaaggttgagaaatgaatcattttcagtactacaaaacacctctgcataaaccatccatgattctatcctcttccttcccaaacagacgtagccattatcctacttctgggatcataatttcctttcttttctttatagtttattgtacatgc i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8173523 267 - 10857215 aattttatttcatagtgaactatacttgacataatacatgtataaaattattctatgtgt------tatattt-------tatcagtattgataaaat-------taacacccacgca---gcccatgtcaccatctcaaggttgagaaatgaatcattttcagtactacaaaacacctctgcataaaccatccatgattctatcctcttccttcccaaacagaagtagccattatcctacttctgggatcataatttcctttcttttctttatagtttattgtacatgc i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15567546 266 - 23502949 aattttacttcatagtgaactatacttgacataatacatgtataaaattattctatgtg-------tatattt-------tatcagtattgataaaat-------taacacccacgca---gcccttgtcaccatctcaaggttgagaaatgaatcgttttcagtactacaaaacacctctgcataaaccatccatgattctatcctcttccttcccaaacagaagtagccattatcctacctctgggatcataatttcctttcttttctttgtagtttattgtacatgc i colAng1.NW_012114488v1 C 0 C 0 s saiBol1.JH378287 1254160 264 - 2905041 tatt--attttatggtgaaatattttcaatgtaatacacgtataaaactattctatatg-------tatattt-------cattagtattgataaaat-------taacacccataca---gcccatgtcaccatctcaaagttgataaatgaatcattttcagtactacaaaacatctctgcataaaccatccatgattctgccctcttcattcccaaacagaagtagccattattctacttttggggtaataatttccttgattttctttatagtttgttgaacatgc i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1210243 263 - 2164891 aatt--attttatggtgaaatattttcgatgtaatacacgtataaaactattctatatg-------tgtattt-------cattagtactgataaaat-------taacacccatata---gcccatgtcaccatttcaaggttgataaatgaatcattttcagtactacaaaacacctctgcataaaccatccatgattctaccctc-tcattcccaaacggaagtagccattaccccacttttgggataataatttccttgatgttctttatagtttattgtacatgc i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1459508 263 - 1813869 aatt--a-cttgtggtgaaatattctcgatgtaatacacgtataaaactattctatatg-------tatattt-------ctttagtattgataaaat-------taacacccataca---gcccatgccaccatttcaaggttgataaatgaatcattttcagtactacaaaacacctctgcataaaccgtccatgactctaccctcttcattcccaaacagaagtagccattatccgactttggggataataatttccttgattttctttatagttcattgtacatgc i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10923993 247 - 12073884 AATTTTATTT----ATGAAATGTATTTGAC-----ACATTTATAAAATTATAATACGTATTACATATATGTTTATGTCTGTGCAAGAAACCCTGAAATCTCACCGTACCACCCATGCAGCTGCCCATG----------------GAGAACTGAGTGGTGCTCGGCACTACAGACGGCCTCC-TGCAAACCTTCCACAATCCGATTCTCTTCATTCACAA---------------GTCCCACGTT--GGAGCATCACTCCCTTGCTTTCCTTTATAGTTTACTGTATGTGC i otoGar3.GL873575 C 0 I 3001 e calJac3.chr4 169835668 35 + 171630274 I e dasNov3.JH569188 497020 7099 + 760995 I e canFam3.chr1 56141435 1862 + 122678785 I a score=1673961.000000 s hg38.chr6_KB021644v2_alt 32565 214 + 185823 atccacagaagaatatctggtaagttttacttg---tttttgtagtctgtaagtaaaatgatattgtatacatctttagtggtgtctttctatcccatcactgtgccatttatccagatacatgcatgtagataggatttgttcacttttactgttgtatagttttcaaatatataaataaatcacaattttagaacaaacctgccctgttgttgat s panTro5.chr6 173498970 209 + 175400573 atccacagaagaatatctggtaagttttacttg---tttttgtagtctgtaagtaaaatgacattgtatacatctttagtggtgtctttc----ccatcactgtgccatttatccagatacatgcatgtagataggatttgttcacttttactgttgtatagttttcaaatatataaataaatcacaattttagaacaaacctgccctgttgttg-t i panTro5.chr6 C 0 C 0 s panPan2.chr6 171749337 210 + 173848474 atccacagaagaatatctggtaagttttacttg---tttttgtagtctgtaagtaaaatgatattgtatacatctttagtggtgtctttc----ccatcactgtgccattgatccagatacatgcgtgtagataggatttgttcacttttactgttgtatagttttcaagtatataaataaatcacaattttagaacaaacctgccctgttgttgat i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11435777 214 - 12463322 atccacagaagaatatctggtaagttttacttg---tttttgtagtctgtaagtaaaataatattgtgtacgtctttaatggtgtctttctatcccatcactgtgccatttatccagatacatgcatgtagataggatttgttcacttttactgttgtatagttttcaagcatataaataaatcacaattttagaacaaacctgccctgttgttgat i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156255869 212 + 157873769 atccacagaagaatatctggtaagttttacttg---tttttgtagtctgtaagtaaaataatattgtagacatctttagtggtttctcta--tcccatcactgtgccatttatccaaatacatgcatgtaggtgggatttgttcacttttactgtcgtatagttttcaagtatataaataaatcacaattttagaacaaacctgccctgttgttgat i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170287733 213 + 172585720 atccacagaaaaatatctggtaacttttacttg---tttttgtagcctgtaagtaaaataatattgtatacatctttagtggtttctttctaacccatcacggtgccatttatccaaatacacgcatgtaagtaggatttgttcacttttactgttgtatattttgc-attatataaacaaatcacaattttagaacaaacctgccctgttgttgat i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169033337 213 - 170955103 atccacagaaaaatatctggtaagttttacttg---tttttgtagcctgtaagtaaaataatattgtatacatctttagtggtttctttctaacccatcacggtgccatttatccaaatacacgcatgtaagtaggatttgttcacttttactgttgtatattttgc-attatataaacaaatcacaattttagaacaaacctgccctgttgttgat i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8320593 213 + 10161646 atccacagaaaaatatctggtaagttttacttg---tttttgtagcctgtaagtaaaataatattgtatacatctttagtggtttctttctaacccatcacggtgccatttatccaaatacacgcatgtaagtaggatttgttcacttttactgttgtatattttgc-attatataaacaaatcacaattttagaacaaacctgccctgttgttgat i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1350130 213 + 3144229 atccacagaaaaatatctgctaagttttacttg---tttttgtagcctgtaagtaaaataatattgtatacatctttagtggtttctttctatcccatcacggtgccatttatccaaatacatgcatgtaagtaggatttgttcacttttactgctgtatattttgc-attatataaacaaatcacagttttagaacaaacctgccctgttgttgat i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96629476 213 + 98384682 atccacagaaaaatatctggtaagttttacttg---tttttgtagcctgtaagtaaaataatattgtatacatctttagtggtttctttctaacccatcacagtgccatttatccaaatacatgcatgtaagtgggatttgttcacttttactgttgtatattttgc-attatataaacaaatcacaattttagaacaaacctgccctgttgttgat i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8173790 213 - 10857215 atccacagaaaaatatctggtaagttttacttg---tttttgtagcctgtaagtaaaataatattgtatacatctttagtggtttctttctaacctgtcacggtgccatttatacaaatacatgcatgtaagtaggatttgttcactttcactgctgtatattttgc-attatataaacaaatcacagttttagaacaaacctgccctgttgttgat i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15567812 199 - 23502949 atccacagaaaaatatctggtaagttttacttg---tttttgtagcctggaagtaaaatgatattgtatacatctttagtg--------------tatcactgtgccatttatccaaatacatgcatgtaagtaggatttgttcacttttactgttgtatattttgc-attatataaataaatcacaattttagaataaacctgccctgttgttgat i colAng1.NW_012114488v1 C 0 C 0 s saiBol1.JH378287 1254424 213 - 2905041 atccctggaaaa----ctagtaagttttacttgttttttttgtagtctgtaagtaaaataaaactgtatacgtctttagtggtttctttttatcctagcacggtgccatttatccaaataaatgcatgtaggtatgatttgttcatttttactgttgtaaaattttccatcatataaataaatcacaatttTAGAACAAACCTGCCCTGTTGTTAAT i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1210506 204 - 2164891 atccctggaaaa----ctcataagttttacttg--ttttttgtagtctgtaagtaaaatagtactgtatacatctttagtggtttctttttatcctagcacggtaccatttatccaaataaatgcatgtaggtatgatttgttcatttttactgtggtataattttccac-------ataaatcacaatttTAGAACAAACCTGCCCTGTTGTTGAT i cebCap1.NW_016107695v1 C 0 I 1179 s aotNan1.NW_018494782v1 1459771 211 - 1813869 atccctggaaaa----ctagaaagttttacttg--ttttctgtagtctgtaagtaaaataacactgtatacgtctttagtggtttctttttatccgagcatggtgccatctatccacataaatgcatgtaggtatgatttgttcatttttactgttgtataattttccattgtataaataaatcacaatttTAGAACAAACCTGCCCTGTTGTTGAT i aotNan1.NW_018494782v1 C 0 I 2287 e otoGar3.GL873575 10924240 3001 - 12073884 I e calJac3.chr4 169835668 35 + 171630274 I e dasNov3.JH569188 497020 7099 + 760995 I e canFam3.chr1 56141435 1862 + 122678785 I a score=7800.000000 s hg38.chr6_KB021644v2_alt 32779 1 + 185823 g s panTro5.chr6 173499179 1 + 175400573 g i panTro5.chr6 C 0 C 0 s panPan2.chr6 171749547 1 + 173848474 g i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11435991 1 - 12463322 g i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156256081 1 + 157873769 g i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170287946 1 + 172585720 g i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169033550 1 - 170955103 g i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8320806 1 + 10161646 g i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1350343 1 + 3144229 g i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96629689 1 + 98384682 g i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8174003 1 - 10857215 g i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15568011 1 - 23502949 g i colAng1.NW_012114488v1 C 0 C 0 s saiBol1.JH378287 1254637 1 - 2905041 G i saiBol1.JH378287 C 0 I 1077 e otoGar3.GL873575 10924240 3001 - 12073884 I e aotNan1.NW_018494782v1 1459982 2287 - 1813869 I e cebCap1.NW_016107695v1 1210710 1179 - 2164891 I e calJac3.chr4 169835668 35 + 171630274 I e dasNov3.JH569188 497020 7099 + 760995 I e canFam3.chr1 56141435 1862 + 122678785 I a score=10480101.000000 s hg38.chr6_KB021644v2_alt 32780 1881 + 185823 gacttagggtggatttcagtttctggctgtgctgctgtggactttcttgtatttatct--tctgaatgtcatgtatttatcatgtgcctgtcaaaagcttcctggagtgtattcctaggagaattgctagttcttaggatattttcattttctactttgtaagtaatggcaaacattcccaaagtgaaaataatgattcacacccgcaccaacaatgtaagcattcctgtggtttcaccttaaccttcactctgtattggttga-tttttt-acttttttctatttggccggaaggtaaaaatatctaattttggttttatttacatttctttgatttctaataagattgagcaattttttgttgttgtttttggacattttgttttgctgtttagcaaaatgtccagtcaggacttctgcccatttttcttttggaatttctcattttGCAGAATTGTTCAAGATTTTATTATGCTCAGGAAGCCACGTTGTATGGAGGAGAGTCAATACTAAGATTTGAGTTGGCTCCAAAGATGGGATTTCCTTTCAGCTTGGCGCAGGGGttttactaacacataatagatggacatatttggggggtacatgtgacaacctaatgcgttcgtataatttgtaaagatcaaatcagtgtacttgggatttctatcaccttaaatatttgtc---ttttTatgatttttaaaaatcaattttattgaggtatactcacac-aaagagtacataatgtatgattctggttttttgaaatgctaggaaaggcaaaactctaagtgaccgaaagcccagcagtgtttgcccacttgtagggattggaagcattggctgccaaggggcatgaaggaactttcagggatcataaaatatcctgtgttgtggacgtggttgtggttgcatatttttatttctttt-gggtagatagctt-ggataaaattactgggtctactgggtaacttcataaactttttaagaaactcaactattttccaaaatggctaggccattgcacactccagtcaacactgtgtgagggttcccactttcaccaacatttgccatcgtctgccttagtgttacagctagtttcatgagtgggaagtggcatgcagtgttgttttaattaacatttccttaatcataaatgatat---acatctttccatgtatatattcttctctgacttcccttgataaaatgtctattatatctttgtacatttttt-aaaaagattgtctatcttaattggtttgtaag--ttctttgtatattatgaatacaattctttgtaagaaataagatttgcaagtattttttgtaaatttatggcttgacattttattctttttatggtgtcttttgaagcacaaaaattttagattttgataaagttca----attttt---ttt-attttatggattttgcatttggtgttatatctaagaatatttgcataaccatttcaaaattttcttctg-tttttttaaatagctttttatagctttagctcttaaatttagac-aatgatccatcccgagatac-tttttatgtgtaatgtaagacacggtctgaattcaatttgtttgaacattaataaatagaaattatttaaaaagaaccaaatagaaattctggagtgagttgagaagtgcgataggtgaaataaaacatcgctagaggatcttaacaacagattcgagtcagta-----gaagaaaaaaccggagaacttgcaggtaagtcaacacatagtatctcattttaggagcagaaagaaaaaaa-gaatggagaaaaattaatagaaagtcaacttgtttgcctacagatatccaattgtcccatacgatttattgcaaagtatagcacttcataattgaattttcctg s panTro5.chr6 173499180 1889 + 175400573 gacttagggtggatttcagtttctggctgtgctgctgtggactttcttatatttatct--tctgcatgtcatgtatttatcatgtgcctgtcaaaagcttcctggagtgtattcctaggagaattgctagttcttaggatattttcattttctactttgtaagtaatggcaaacattcccaaagtgaaaataatgattcacacccccaccaacaatgtaagcattcctgtggtttcatcttaaccttcactctgtattggttga-tttttttacttttttctatttggccggaaggtaaagatatctaattttggttttatttacatttctttgatttctaataagattgagcaattttttgttgttggttttggacattttgttttgctgtttagcaaaatgtccagtcaggacttctgcccatttttcttttggaatttctcattttGCAGAATTGTTCAAGATTTTATTATGCTCAGGAAGCCACGTTGTATGGAGGAGAGTCAATACTAAGATTTGAGTTGGCTCCAAAGATGGGATTTCCTTTCAGCTTGGCGCAGGGGttttactaacacataatagatggacatatttggggggtacatgtgacaacctaatgcgttcgtataatttgtaaagataaaatcagtgtacttgggatttctatcaccttaaatatttgtc---ttttTatgatttttaaaaatcaattttattgaggtatactcacac-aaagagtacataatgtatgattatggttttttgaaatgctaggaaaggcaaaactctaagtgaccaaaagcccagcagtgtttgccCACTTGTAgggattggaagcattggctgccaaggggcatgaaggaactttcagggatcataaaacatcctgtgttgtggacgtggttgtggttgcatatttttatttctttt-gggtagatagctt-ggataaaattactgggtctactgggtaacttcataaactttttaagaaactcaactattttccaaaatggctaggccattgcacactccagtcaacactgtgtgagggttcccgctttcaccaacatttgccatcgtctgccttagtgttacagccagtttcatgagtgggaagtggcatgcagtgttgttttaattaacatttccttaatcataaatgatatcgaacatctttccatgtatatattcttctctgacttcccttgataaaatgtctattatatctttgtacattttta-aaaaagattgtctatcttaattggtttgtaagagttctttgtatattatgaatacaattctttgtaagaaataagatttgcaagtattttttgtaaatttatggcttgacattttattctttttatggtgtcttttgaagcacaaaaattttagattttgataaagttca----attttt---ttttattttatggattttgcatttggtgttatatctaagaatatttgcctagccatttcaaaattttcttctg-ttttttaaaatagctttttatagctttagctcttaaatttagaccaatgatccatcctgagatac-tttttatgtgtaatgtaagacatggtctgaattcaatttgtttgaacattaataaatagaaattatttaaaaagaaccaaatagaaattctggagtgagttgagaagtgcgataggtgaaataaagcatctctagaggatcttaacaacagatttgagtcagta-----gaagaaaaaactggagaacttgcaggtaagtcaacacatagtatctcattttaggagcagaaagaaaaaaa-gaatggagaaaaattaatagaaagtcaacttgtttgcctacagatatccaattgttctataccatttattacaaagtatagcacttcataattgaattttcctg i panTro5.chr6 C 0 C 0 s panPan2.chr6 171749548 1884 + 173848474 gacttagggtggatttcagtttctggctgtgctgctgtggactttcttgtatttatct--tctgcatgtcatgtatttatcatgtgcctgtcaaaagcttcctggagtgtattcctaggagaattgctagttcttaggatattttcattttctactttgtaagtaatggcaaacattcccaaagtgaaaataatgattcatacccccaccaacaatgtaagcattcctgtggtttcatctta------actctgtattggttga-tttttttacttttttctatttggccggaaggtaaagagatctaattttggttttatttacatttctttgatttctaataagattgagcaattttttgttgttgtttttggacattttgttttgctgtttagcaaaatgtccagtcaggacttctgcccatttttcttttggaatttctcattttGCAGAATTGTTCAAGATTTTGTTATGCTCAGGAAGCCACGTTGTATGGATGAGAGTCAATACTAAGATTTGAGTTGGCTCCAAAGATGGGATTTCCTTTCAGCTTGGCGCAGGGGttttactaacacataatagatggacatatttggggggtacatgtgacaacctaatgcgttcgtataatttgtaaagatcaaatcagtgtacttgggatttctatcaccttaaatatttgtc--ttttttatgATTTTTAAAAATCAATTTTATTGAGGTATACTCacac-aaagagtacataatgtatgattctggttttttgaaatgctaggaaaggcaaaaccctaagtgaccgaaagcccagcagtgtttgccctcttgtagggattggaagcattggctgccgaggggcatgaaggaactttccaggatcataaaatatcctgtgttgtggacgtggttgtggttgcatatttttatttctttt-gggtagatagcttgggataaaattactgggtctactgggtaacttcataaactttttaagaaactcaactattttccaaaatggctaggccattgcacactccagtcaacactgtgtgagggttcccactttcaccaacatttgccatcatctgccttagtgttacagccagtttcatgagtgggaagtggcatgcagtgttgttttaattaacatttacttaatcataaatgatatcgaacatctttccatgtatatattcttctctgacttcccttgataaaatgtctatcatatctttgtacattttta-aaaaagattgtctatcataattggtttgtaagagctctttgtatattatgaatacaattctttgtaagaaataagatttgcaagtattttttgtaaatttatggcttgacattttattctttttatggtgtcttttgaagcacaaaaattttagattttgataaagttca----attttt---ttt-attttatggattttgcatttggtgttatatctaagaatatttgcatagccatttcaaaattttcttctg-ttttttaaaatagctttttatagctttagctcttaaatttagaccaatgatccatcctgagatac-tttttatgtgtaatgtaagacatggtctgaattcaatttgtttgaacattaataaatagaaattatttaaaaagaaccaaatagaaattctggagtgagttgagaagtgcgataggtgaaataaagcatctctagaggatcttaacaatagatttgagtcagta-----gaagaaaaaactggagaacttgcaggtaagtcaacacatagtatctcattttaggagcagaaagaaaaaaa-gaatggagaaaaattaatagaAAGTCAACTTGtttgcctacagatatccaattgttctataccatttattacaaagtatagcacttcataattgaattttcctg i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11435992 1851 - 12463322 gacttagggtggatttcagtttctggctgtgctgctgtggactttcttgtatttatct--tctgcatgtcatgtatttatcatgtgcctgtcaaaagcttcctggaatgtattcctaggagaattgctagttcttaggatattttcattttctactttgtaagtaatggcaaacattcccaaagtgaaaataatgattcacaccc-caccaacaatgtaagcattcctgtggtttcaccttaaccttcactctgtattggttga-tttttttacttttttctatttggccggaaggtaaagttatctaattttggttttatttacatttctttgatttctaataagattgagcaattttttgttgttggttttggacattttgttttgctgtttagcaaactgtcctgtcaggacttctgcccatttttcttttggaatttctcattttGCAGAATTGTTCAAGATTTTATTATGCTCAGGAAGCCACGTTGTATGGATGAGAGTCAATACTAAGATTTGAGTTGGCTCCAAAGATGGGATTTCCTTTCAGCTTGGCGCAGGGGttttactaacacataatagatggacatatttggggggtacatgtgaaaacctaatgcgttcgtataatttgtaaagatcaaatcagtgtacttgggatttctatcaccttaaatatttgtc--ttttttgtgATTTTTAAAAATCAATTTTATTGAGGTATACTTacac-aaagagtacataatgtatgattctggttttttgaaatgctaggaaaggcaaaactctaagtgactgaaagcccagcagtgtttgcccacttgtagggattggaagcattggctgccaaggggcatgaaggaactttcagggatcataaaatatcctgtgttgtggacgtggttgtggttgcatatttttatttctttt-gggtaggtagcttgggataaaattactgggtctactgggtaacttcataaactttttaagaaactcaactattttccaaaatggctaggccattgcacactccagtcaacactgtgtgagggttcccactttcaccaa-atttgccgtcgtctgccttagtgttacagccagtttcatgagtgggaagtggcatgcagtgttgttttaattaacatttccttaatcataaatgatatcgaacatc-----------------------------------taaaatgtctattatatctttgtacatttttt-aaaaagattgtctatcttaattggtttgtaagagttctttgtatattatgaatacaattctttgtaagaaataagatttgcaagtattttttgtaaatttatggcttgactttttattctttttatggtgtcttttgaagcacaaaaattttagattttgataaagttca----agtttt---ttt-attttatggattttgcatttggtgttatatctaagaatatttgcataaccatttcaaaattttcttctg-tttttt--aatagctttttatagctttagctcttaaatttagaccaatgatccatcccgagatac-tttttatgtgcaatgtaagacacggtctgaattcaatttgtttgaacattaataaatagaaattatttaaaaagaaccaaatagaaattctggagtgagttgagaagtgcaataggtgaaataaaacatctctagaggatcttgacaacagattcgagtcagta-----gaagaaaaaaccggagaacttgcaggtcagtcaacacatagtatctcattttaggagcagaaagaaaaaaa-gaatggagaaaaattaatagaaagtcaacttgtttgcctacagatatccaattgtcccatacgatttattgcaaagtatagcacttcataattgaattttcctg i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156256082 1892 + 157873769 gacttagggtggatttcagtttctggctgtgctgctgtggactttcttgtatttatct--tgtgcatgtcatgtatttatcatgtgcctgtcaaaagcttcttggagtgtattcctaggagaattgctagttcttaggatattttcattttctactttgtaagtaacggcaaacgttcccaaagtgaaaataatggttcacacccccaccaataatgtaagcattcctgtgctttcatcttaaccttcactctgtattggttga-tttttt-acttttttctatttggtcggaaggtaaaaatatctaattttggatttatttgcatttcttttatttctaataagattgagcaatttttt-ttgttgtttttggacattttgttttgctgtttagcaaaatgtccagtcaggacttctgcccatttttctttcagaatttatctttttgcagaattgttcaagattttattatgctcaggaAGCCACGTTGTATGGATGAGAGTCGATACTAAGATTTGAGCTGGCTCCCAAGACGGGATCTCCTTTCAGCCTGGCGCGGGGGttttactaacacataatagatggacatatttggggggtacatgtgccaacctaatgcgttcctataatttgtaaagatcaaatcggtgtacttgggatttctatcaccttaaatatttgtc--ttttttatgATTTTTAAAAATCAATTTTATTGAGGTATACTCacac-aaagagtacataatgtatgattctggttttttgaaatgctaggaaaggcaaaactctaagtgacagaaagcccagcagtgtttgcccacttgtagggattggaagcattggctgccaaggggcacgaaggaactttcagggatcataaaatatcctgtgttgtggacgtggttgtggttgcatatttttatttctttt-gggtagatagcttgggataaaattactgggtctactgggtaacttcataaactttttaagaaactcaactattttcc-aaatggctaggccataccgcactctagtcaacaatgcgtgagggttctcactttcaccaacatttgccatcgtctgccttagtgttacagccagtctcatgagtgggaaggggcttgcagtgttgttttaatcaacatctccttaatcataaattatgttgaacatctttccacgtatatgttcttctctgacttcccttgataaaatgtcaattatatctttgtacatttttt-aaaaagattgtctatcttaattggtttgtaagagttctttgtgtattatgaaaacaattctttgtaagaaataagatttgcaggtattttttgtaaatgtatggcttgactttttgttctttttatggtgtcttttgaagcacaaaagttttagatttt-ataaagttcaatgtattttt---ttt-attttatgaattttgcatttggtgttgtatctaagaatatttgcataaccatttcaaaattttcttcttctttttttaaatagctttttatagctttagctcttaaatttagaccaatgatccatcccaagatac-tttttatgtataatgtaagacatggtctgaattcaatttgtttgaacattaataaatagaaactatttaaaaagaaccgaatagaaactctggagtgagctgagaagtgcaatagacgaaataaaacatctctagaggatcttatcaacagatttgagtcagta-----gaagaaaaaaccggagaacttgcaggtaagtcaacacatagtatctcattttaggagcagaaagaaaaaaaggaatggagaaaaattaacagaAAGTCAACTTGtttgcctatagatatccaatttccccataccatttattgcaaagtatagcacttcataattgaattttcctg i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170287947 1900 + 172585720 gacttagggtggatttcagtttctggctgtgctgctgtggacgttcttgtatttatct--tgtgtgtgtcatgtatttatcatgtgtctgtcgaaagctgcttgcagtgtatttccaggagaattgccagttcttagggtattttcattttctactttgtaagtaatggcaaacattcccaaagtgaaaataatgattcacacccccaccaacaatgtaagcattcttgtggtttcatcttaaccttcactctgacttggtcga-tttttt-gcttttttctatttggtcagaaggcaaacatatctaattttggttttatttacatttctttgatttctaataagattgagcaattttt--ttgttgtttttggacattttgttttgctgtttagcaaaatgtccagtcaggatttctgcccatttttcttttggaatttctctttttGCAGAATTGTTCAAGATTTTATTATGCTCAGGAAGCCAAGTTGTATGGATGAGAGTCAATTCTAAGATTTGAATTGGCTCCAAAGGTGGGATTTACTTTCAGCTTGGTGCAGGGGttttactaatacataacagatgggcgtatttggggggtacatgtgacaacctaaggcattcctgtaatttgtaaagatcaaatcagtgtacttgggatttctatcgccttaaatatttgtgttttctttAAGATTTTTAAAAATCAATTTTATTGAGGTATACTCGcacaaaagagtacataatgtatgattctggttttttgaaatgctaggaaaggcaaaactctaagtgaccgaaagcccagcagcgttcgcctactggtagggattgaaagcattggctgccagggggcatgaaggaactttcagggctcataaaatatcatgtgttgtggacgcggttgtggttgcatatttttatttcttttggggtatatagcttgggataaaattactgggtctactgggtaacttcataaactttttaagaaactcaactattttccataatggctaggccattgcacactctggccaacactgtgtaagggttcccactttcaccaacatttgccattgtctgcctcagtgttacagccagtctcatgagcgggaagtggcatgcagtgctgttttaattagcatttccttcatcataaatgatgttgaacatctttccatgtatatattcttctctgacttcccttgataaaaagtctattatatctttgtacatttttttaaaaagattgtccatcttaattggtttgtaagagttctttgtatattatgaataaaattctttgtaagaaataagatttgcaaatatttttcgtgaatttatggcttgactttttatcctttttatggtgtcttttgaagcacagaagttttagattttgataaagttca----atttttttcttt-attttatggattttgcatttggtgttgtatctaagaatatttgcctaaccatttcaaaattttcttctg-ttttttaaaatagctttttatgcctttagctcttaaatttagaccaatggtccatcctgagatac-tttttgtgtgtgatgtaagacacggtctgaattcaatttgtttgaactttaataaatagaaactatttaaaaagaaccaaatagaaattctggggtgagttgaaaagtgcaataggtgaaatgaaacatctctagagggtcttaacaacagatttgagtcagtcaaaaaaaaaaaaaaactggagaacttgcaggtaagtcaacacatagtatctcattttaggagcagaaagaaaaaaa-gaatggagaaaaattaacagaaactcaacttgtttgcctacagatatccaattgccccataccatttattgcaaagtatagcacttcgtaattgaattttcctg i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169033551 1898 - 170955103 gacttagggtggatttcagtttctggctgtgctgctgtggacgttcttgtatttatct--tgtgtgtgtcatgtatttatcatgtgtctgtcgaaagctgcttgcagtgtatttccaggagaattgccagttcttagggtattttcattttctactttgtaagtaatggcaaacattcccaaagtgaaaataatgattcacacccccaccaacaatgtaagcattcttgtggtttcatcttaaccttcactctgacttggtcga-tttttt-gcttttttctatttggtcagaaggcaaacatatctaattttggttttatttacatttctttgatttctaataagattgagcaattttt--ttgttgtttttggacattttgttttgctgtttagcaaaatgtccagtcaggatttctgcccatttttcttttggaatttctctttttGCAGAATTGTTCAAGATTTTATTATGCTCAGGAAGCCAAGTTGTATGGATGAGAGTCAATTCTAAGATTTGAATTGGCTCCAAAGGTGGGATTTACTTTCAGCTTGGTGCAGGGGttttactaatacataacagatgggcgtatttggggggtacatgtgacaacctaaggcattcctgtaatttgtaaagatcaaatcagtgtacttgggatttctatcgccttaaatatttgtgttttctttAAGATTTTTAAAAATCAATTTTATTGAGGTATACTCGcacaaaagagtacataatgtatgattctggttttttgaaatgctaggaaaggcaaaactctaagtgaccgaaagcccagcagcgttcgcctactggtagggattgaaagcattggctgccagggggcatgaaggaactttcagggctcataaaatatcatgtgttgtggacgcggttgtggttgcatatttttatttcttttggggtatatagcttgggataaaattactgggtctactgggtaacttcataaactttttaagaaactcaactattttccataatggctaggccattgcacactccggtcaacactgtgtaagggttcccactttcaccaacatttgccattgtctgcctcagtgttacagccagtctcatgagcgggaagtggcatgcagtgctgttttaattaacatttccttcatcataaatgatgttgaacatctttccatgtatatattcttctctgacttcccttgataaaaagtctattatatctttgtacatttttttaaaaagattgtccatcttaattggtttgtaagagttctttgtatattatgaataaaattctttgtaagaaataagatttgcaaatattttttgtgaatttatggcttgactttttatcctttttatggtgtcttttgaagcacagaagttttagattttgataaagttca----atttttttcttt-attttatggattttgcatttggtgttgtatctaagaatatttgcctaaccatttcaaaattttcttctg-ttttttaaaatagctttttatgcctttagctcttaaatttagaccaatggtccatcctgagatac-tttttgtgtgtgatgtaagacacggtctgaattcaatttgtttgAACTTTaataaatagaaactatttaaaaagaaccaaatagaaattctggggtgagttgaaaagtgcaataggtgaaatgaaacatctctagagggtcttaacaacagatttgagtcagtc--aaaaaaaaaaaaactggagaacttgcaggtaagtcaacacatagtatctcattttaggagcagaaagaaaaaaa-gaatggagaaaaattaacagaaactcaacttgtttgcctacagatatccaattgccccataccatttattgcaaagtatagcacttcgtaattgaattttcctg i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8320807 1896 + 10161646 gacttagggtggatttcagtttctggctgtgctgctgtgaacgttctcgtatttatct--tgtgtgtgtcgtgtatttatcatgtgtctgtcgaaagctgcttgcagtgtatttccaggagaattgccagttcttagggtattttcattttctactttgtaagtaatggcaaacattcccaaagtgaaaataatgattcacacccccaccaacaatgtaagcattcttgtggtttcatcttaaccttcactctgacttggtcga-tttttt-gcttttttctatttggtcagaaggcaaacatatctaattttggttttatttacatttctttgatttctaataagattgagcaattttt--ttgttgtttttggacattttgttttgctgtttagcaaaatgtccagtcaggatttctgcccatttttcttttggaatttctctttttGCAGAATTGTTCAAGATTTTATTATGCTCAGGAAGCCAAGTTGTATGGATGAGAGTCAATTCTAAGATTTGAATTGGCTCCAAAGATGGGATTTACTTTCAGCTTGGTGCAGGGGttttactaatacataacagatgggcgtatttggggggtacatgtgacaacctaaggcattcctgtaatttgtaaagatcaaatcagtgtacttgggatttctatcgccttaaatatttgtgttttctttAAGATTTTTAAAAATCAATTTTATTGAGGTATACTCGcacaaaagagtacataatgtatgattctggttttttgaaatgctaggaaaggcaaaactctaagtgaccgaaagcccagcagcgttcgcctactggtagggattgaaagcattggctgccagggggcatgaaggaactttcagggctcataaaatatcatgtgttgtggacgcggttgtggttgcatatttttatttcttttggggtatatagcttgggataaaattactgggtctactgggtaacttcataaactttttaagaagctcaactgttttccataatggctaggccattgcacactccggtcaacactgtgtaagggttcccactttcaccaacatttgccattgtctgcctcagtgttacagccagtctcatgagcgggaagtggcatgcagtgctgttttaattaacatttccttcatcataaatgatgttgaacatctttccatgtatatattcttctctgacttcccttgataaaaagtctattacatctttgtacatttttttaaaaagattgtccatcttaattggtttgtaagagttctttgtatattatgaataaaattctttgtaagaaataagatttgcaaatattttttgtgaatttatggcttgactttttatcctttttatggtgtcttttgaagcacagaagttttagattttgataaagttca----atttttttcttt-attttatggattttgcatttggtgttgtatctaagaatatttgcctaaccatttcaaaattttcttctg-ttttttaaaatagctttttatgcctttagctcttaaatttagaccaatggtccatcccgagatac-tttttgtgtgtgatgtaagacacggtctgaattcaatttgtttgAACTTTaataaatagaaactatttaaaaagaaccaaatagaaattctggggtgagttgaaaagtgcaataggtgaaatgaaacatctctagagggtcttaacaacagatttgagtcagtc----aaaaaaaaaaactggagaacttgcaggtaagtcaacacatagtatctcattttaggagcagaaagaaaaaaa-gaatggagaaaaattaacagaaactcaacttgtttgcctacagatatccaattgccccataccatttattgcaaagtatagcacttcgtaattgaattttcctg i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1350344 1894 + 3144229 gacttagggtggatttccgtttctggctgtgccgctgtggacgttcttgtatttatct--tgtgtgtgtcatgtatttatcatgtgcctgtcgaaagctgcttgcagtgtatttccaggagaattgccagttcttagggtattttcattttctactttgtaagtaatggcaaacattcccaaagtgaaaataatgattcacacccccaccaacaatgtaagcattcttgtggtttcatcttaaccttcactctgtcttggtcga-tttttt-gcttttttctatttggtcggaaggcaaacatatctaattttggttttatttacatttctttgatttctaataagattgagcaattttt--ttgttgtttttggacattttgttttgctgtttagcaaaatgtccagtcaggatttctgcccatttttcttttggaatttctctttttGCAGAATTGTTCAAGATTTTATTATGCTCAGGAAGCCAAGTTGTATGGATGAGAGTCAATTCTAAGATTTGAGTTGGCTCCAAAGATGGGATTTACTTTCAGCTTGGTGCAGGGGttttactaatacat-acagatgggcgtatttggggggtacatgtgacaacctaaggcattcctgtaatttgtaaagatcaaatcagtttacgtgggatttctatcgccttaaatatttgtgttttctttAAGATTTTTAAAAATCAATTTTATTGAGGTATACTCGcacaaaagagtacataatgtatgattctggttttttgaaatgctaggaaaggcaaaactctaagtgaccgaaagcccagcagcgttcgcctactggtagggattgaaagcattggctgccagggggcatgaaggaactttcagggctcataaaatatcatgtgttgtggacgcggttgtggttgcatatttttatttctttt-gggtatatagcttgggataaaattactgggtctactgggtaacttcataaactttttaagaaactcaactattttccataatggctaggccattgcacactccggtcaacactgcgtaagggttcccactttcaccaacatttgccattgtctgcctcagtgttacagccagtctcatgagtgggaagtgacatgcagtgctgttttaattaacatttccttcatcataaatgatgttgaacatctttccatgtatatattcttctctgacttcccttgataaaaagtctattatagctttgtacatttttttaaaaagattgtcagtcttaattggtttgtaagagttctttgtatattatgaatacaattctttgtaagaaataagatttgcaagtattttttgcgaatttatggcttgactttgtatcctttttatggtgtcttctgaagcacagaagttttagattttgataaagttca----atttttttcttt-attttatggattttgcatttggtgttgtatctaagaatatttgcctaaccatttcaaaattttcttctg-ttctttaaaatagctttttatgcctttagctcttaaatttagatcagtggtccatcccgagatacttttttgtgtgtgatgtaagacacggtctgaattcaatttgtttgAACTTTaataaatagaaactatttaaaaagaaccaaatagaaattctggggtgagttgaaaagtgcaattggtgaaatgaaacatctctagagggtcttaacaacagatttgagtcagtc-----aaaaaaaaaactggagaacttgcaggtaagtcaacacatagtatctcattttaggagcagaaagaaaaaaa-gaatggagaaaaagtaacagaaactcaacttgtttgcctacagatatccaattgccccataccatttattgcaaagcatagcacttcgtaattgaattttcctg i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96629690 1857 + 98384682 gacttagggtggatttcagtttctggctgtgccgctgtggacgttct------------------------tgtatttatcatgtgcctgtcgaaagctgcttgcagtgtattcccaggagaattgccagttcttagggtattttcattttctactttgtaagtaatggcaaacattcccaaagtgaaaataatgattcacacccccaccaacaatgtaagcattcttgtggtttcatcttaaccttcactctgtattggtcga-tttttt-gcttttttctatttggtcggaaggcaaacatatctaattttggttttatttacatttctttgatttctaataagattgagcaatttct--ttgttgtttttggacattttgttttgctgtttagcaaaatgtccagtcaggatttctgcccatttttcttttggaatttctctttttGCAGAATTGTTCAAGATTTTATTATGCTCAGGAAGCCAAGTTGTATGGATGAGAGTCAATACTAAGATTTGAGTTGGCTCCAAAGATGGGATTTACTTTCAGCTTGGTGCAGGGGttttactaatacataacagacgggcatattt--ggggtacatgtgacaacctaaggcattcctgtaatttgtaaagatcaaatcagtgtacttgggatttctatcaccttaaatatttgtcttttctttAAGATTTTTAAAAACCAATTTTATTGAGGTATACTCacacaaaagagtacataatgtatgattctggttttttgaaatgctaggaaaggcaaaactctaagtgactgaaag-ccagcagcgttcacctaccggtagggattggaagcattggctgccaaggggcatgaaggaactttcagggctcataaaatatcatgtgttgtggacgcggttgtggttgcatatttttatttctttt-gggtatatagcttgggataaaattactgggtctactgggtaactttataaactttttaagaaactcaactattttccataatggctaggccattgcacactccagtcaacactgtgtgagggttcccactttcaccaacatttgccattgtctgccttagtgttacaaccagtctcatgagcgggaagtggcatgcagtgttgttttaattaacatttctttaatcacaaatgatgttgaacatctttccatgtatatattcttctctgacttcccttgataaaaagtctattatatctttgtacattttttaaaaaagattgtctatcttaattgatttgtaagagttctttgtatattatgaatacaattctttgtaagaaataagatttgcaagtattttttgcaaatttatggcttgactttttatccttttt-tggtgtcttttgaagcacagaag---------ttgataaagttca----aatttttt-ttt-attttatggattttgcatttggtgttgtatctaagaatatttgcctaaccatttcaaaattttcttctg-tttttttaaatagctttttatgcctttagctcttcaatttagaccaatggtccatcccgagatac-tttttgtgtgtgatgtaagacatggtctgaattcaatttgtttgaactttaataaatagaaactatttaaaaagaaccaaatagaaattctggggtgagttgaaaagtacaataggtgaaatgaaacatctctagagggtcttaacaacagatttgagtcagtc------aaaaaaaaactggagaacttgcaggtaagtcaacacacagtatctcattttaggagcagaaagaaaaaaa-gaacggagaaaatttaacagaaactcaacttgtttgcctacagatatccaattgccccataccatttattgcaacgtatagcacttcgtaattgaatttttctg i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8174004 1892 - 10857215 gacttagggtggatttccgtttctggctgtgccgctgtggacgttcttgtgtttatct--tgtgtgtgtcatgtatttatcatgtgcctgtcgaaagctgcttgcagtgtatttccaggagaattgccagttcttagggtattttcattttctactttgtaagtaatggcaaacattcccaaagtgaaaataatgattcacacccccaccaacaatgtaagcattcttgtggtttcatcttaaccttcactctgtcttggtcga-tttttt-gcttttttctatttggttggaaggcaaacatatctaattttggttttatttacatttctttgatttctaataagattgagcaattttt--ttgttgtttttggacattttgttttgctgtttagcaaaatttccagtcaggatttctgcccatttttcttttggaatttctctttttGCAGAATTGTTCAAGATTTTATTATGCTCAGGAAGCCAAGTTGTATGGATGAGAGTCAGTTCTAAGATTTGAGTTGGCTCCAAAGATGGGATTTACTCTCAGCTTGGTGCAGGGGttttactaatacataacagatgggcgtatttggggggtacatgtgacaacc-aaggcattcctgtaatttgtaaagatcaaatcagtgtacttgggatttctatcgccttaaatatttgtgttttctttAAGATTTTTAAAAATCAATTTTATTGAGGTATACTCGcacaaaagagtacataatgtatgattctggttttttgaaatgctaggaaaggcaaaactctaagtgaccgaaagcccagcagcgttcgcctactggtagggattgaaagcattggctgccagggggcatgaaggaactttcagggctcataaaatatcatgtgttgtggacgcggttgtggttgcatatttttatttctttt-gggtatatagcttgggataaaattactgggtctactgggtaacttcataaactttttaagaaactcaactattttccataatggctaggccattgcacactccggtcaacactgcgtaagggttcccactttcaccaacatttgccattgtctgcctcagtgttacagccagtctcatgagcgggaagtggcatgcagggctgttttaattaacatttccttcatcataaatgatgttgaacatctttgcatgtatatattcttctctgacttcccttgataaaaagtctattatatctttgtacatttttttaaaaagattgtccatcttaattggtttgtaagagttctttgtatattatgaatacaattctttgtaagaaataagatttgcaagtattttttgcaaatttatggcttgactttttatcctttttatggtgtcttctgaagcacagaagttttagattttgataaagttca----atttttttcttt-attttatggattttgcatttggtgttgtatctaagaatatttgcctaaccatttcaaaattttcttctg-ttttttaaaatagctttttatgcctttagctcttaaatttagaccaatggtccatcccgagatac-tttttgtgtgtgatgtaagacacggtctgaattcaatttgtttgAACTTTaataaatagaaactagttaaaaagaaccaaatagaaattctggggtgagttgaaaagtgcaatagatgaaatgaaacatctctcgagggtcttaacaacagatttgagtcagtc-----aaaaaaaaaactggggaacttgcaggtaagtcaatacatagtgtctcattttaggagcagaaagaaaaaaa-gaatggagaaaaagtaacagaaactcaacttgtttgcctgcagatat-caattgccccataccatttattgcaaagcatagcgcttcgtaattgaattttcctg i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15568012 1892 - 23502949 gacttaggatggatttcagtttctggctatgctgctgtggacgttcttgtatttatcttgtgtgtgtgtcacgtatttatcatgtgcctgtcgaaagctgcttgcagtgtattcccaggagaattgccagttcttagggtattttcattttctactttgtaagtaatggcaaacatttccaaagtgaaaataatgattcacacccccaccaacaatgtaagcattcttgtggtttcatcttaaccttcactctgtattggtcgattttttt-gcttttttctatttggtgggaaggcaaacatatctaattttggctttatttacatttctttgatttctaataagattgagcaaatttt--ttgttgtttttggacattttgttttgctgtttagcaaaatgtccagtcaggatttctgcccatttttcttttggaatttctctttttGCAGAATTGTTCAAGATTTTATTATGCTCAGGAAGCCAAGTTGTATGGATGAGAGTCAATACTAAGATTTGAGTTGGCTCCAAAGATGGGATCTACTTTCAGCTTGGTGCAGGGGttttactaatacataacacatgggcatatttggggggtacatgtgacaacctaaggcattcctgtaatttgtaaagatcaaatcagtgtacttgggatttctatcgccttaaatatttgtcttttctttAAgatttttaaaaaccaattttattgaggtacactcacacaaaagagcacataatgtatgattctggttttttgaaatgctaggaaaggcaaaactctaagtgaccaaaagcccagcagtgttcgcccactggtagggattggaggcattggctgccaaggggcatgaaggaactttcagggctcataaaatatcatgtgttgtggacacggttgtggttgcatatttttatttctttt-ggatatatagcttgggataaaattacagggtctactgggtaacttcacaaactttttaagaaactcaactattttccataatggctaggccattgcacactccggtcaacactgcgtgagggttcccactttcaccaacatttgccattgtctgccttagtgttacagccagtctcatgagcggaaagtggcatgcagtgctgttttaattaacatttcctgaatcataaatgatgttgaacatctttccatgtatatattcttctctgacttcccttgataaaaagtctattatatctttgtacatttttttaaaaagattgtctatcttaattggtttgtaagagttctttgtatattatgaatacaattctttgtaagaaataagatttgccagtattttttgcaaatttatggcttgactttttatcctttttatggtgtcttttgaagcacagaaattttagattttgataaagttca----attttt---ttt-attttatggatgttgcatttggtattgtatctaagaatatttgcctaaccatttcaaaattttcttttg-ttttttcaaatagctttttgtgcctttag-tcttaaatttagacaaatggtccatcccgagatac-tttttgtgtgtgatgtaagacatggtctgaattcaatttgtttgaactttaataaatagaaactatttaaaaagaaccaaatagaaattctggggtgagttgaaaagtgcaataggtgaaatgaaacatctctagagggtcttaacaacagatttgagtcagtc-----aaagaaaaaactggagaacttgcaggtaagtcaccacatagtatctcattttaggagcagaaag-aaaaaa-gaatggagaaaaattaacagaaacttaacttgtttgcctacagatatccaattgccccataccatttattgcaaagtatagcacttcgtaattgaattttcctg i colAng1.NW_012114488v1 C 0 C 0 e otoGar3.GL873575 10924240 3001 - 12073884 I e saiBol1.JH378287 1254638 1077 - 2905041 I e aotNan1.NW_018494782v1 1459982 2287 - 1813869 I e cebCap1.NW_016107695v1 1210710 1179 - 2164891 I e calJac3.chr4 169835668 35 + 171630274 I e dasNov3.JH569188 497020 7099 + 760995 I e canFam3.chr1 56141435 1862 + 122678785 I a score=2274995.000000 s hg38.chr6_KB021644v2_alt 34661 399 + 185823 gcatctttgtggaaaaacaatcgactgtaagccttagtgtttatctgtttatctgtgggatttttcaattatactccattgatctatatgtatacatctatctcaatatcacaatcttttgatttagtggagcttccgaata-agttttaaaaatgggaagtg----------aaattcctcca--tttgtttttcaga-tgttttgactatgttgggtctacgcattttcatgtaaa-tgttaggaacagcttgtcagttgccacaaaaagcttgctggaatttttacaggtgttgaattgaatatatgtatcaatttcacatgaattttcatctttaaaatattgacttttccaactcatacacatggattgtttctctatttaatatgatcatcattcattgctttcagca s panTro5.chr6 173501069 390 + 175400573 gcatctttgtggaaaaacaatcaactgtaagccttagtgtttatctgt--------gggatttt-cagttatactccattgatctatatgtatacatttatctcaatatcacaatcttttgatttagtggagctaacgaata-agttttaaaaatgggaagtg----------aaattcctcca--tttgtttttcaga-tgttttgactatgttgggtctatgcattttcatgtaaa-ttttaggaacagtttgtcaattgccacaaaaagcttgctggaatttttacaggtgttgaattgaatatatgtatcaatttcacatgaattttcatctttaaaatattgacttttccaactcatacacatggattgtttctctatttaatatgatcatcattcattgctttcagca i panTro5.chr6 C 0 C 0 s panPan2.chr6 171751432 390 + 173848474 gcatctttgtggaaaaacaatcaactgtaagccttagtgtttatctgt--------gggatttt-cagttatactccattgatctatatgtatacatttatctcaatatcacaatcttttgatttagtggagctaacgaata-agttttaaaaatgggaagtg----------aaattcctcca--tttgtttttcaga-tgttttgactatgttgggtctacgcattttcatgtaaa-ttttaggaacagtttgtcaattgccacaaaaagcttgctggaatttttacaggtgttgaattgaatatatgtatcaatttcacatgaattttcatctttaaaatattgacttttccaactcatacacatggattgtttctctatttaatatgatcatcattcattgctttcagca i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11437843 390 - 12463322 gcatctttgtggaaaaacaatcgactgtaagccttagtgtttatctgt--------gggatttt-caattatactccattgatctatatgtatacatttatctcaatatcacaatcttttgatttagtggaacttccgaata-agttttaaaaatgggaagtg----------aaattcctcca--tttgtttttcaga-tgttttgactatgttgggtctacgcattttcatgtaaa-ttttaggaacagcttgtcaattgcaacaaaaagcttgctggaatttttacaggtgttgaattgaatatatgtatcaatttcacatgaattttcatctttaaaatattgacttttccaactcatacacatggattgtttctctatttaatatgatcatcattcattgctttcagca i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156257974 389 + 157873769 gcatctttgtggaatagcaatcggctgtaagccttagtgttta-ctgt--------gggacttt-caattatactccattgatctatatgtatatatttatctcagtatcagaatcttttgatttagtggagcttccgagta-agttttaaaaatgggaagta----------aaattcctcca--cttgtttttcaga-tgttttgactatgttgggtcttcgcattttcatgtaaa-ttttaggaacagcttgtcaattgccacaaaaaacttgctggaatttttacaggtgttgaattgaatgtatgtaccaatttcacatgaattttcgtctttaaaatattgacttttccaactcatacacatggattgtttctctatttaatatgatcatcattcatttctttcagca i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170289847 394 + 172585720 gcatctttgtggataaacaattgactgtaagccttagggtttatctgt--------gggacttt-caattatactgcattgatctatatgtgtttgtttatctcagtatcacaatcttttgatttagtggagcttccgaggagggttttaaaactgggaagtg----------aaattcctccaattttttttttaagattgttttgactatattgggtctttgcattttcatgtaaa-ttttaggaacagcttgtcaattgccacaaaaagcttgctggaatttttacaggtgttgaattgaatgtatgtatcaatttcacatgaattttcatctttaaaatgttgacttttccaaagcatacacgtggattgtttctctatttagtatgatcaccattcatttctttcagca i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169035449 394 - 170955103 gcatctttgtggataaacaattgactgtaagccttagtgtttatctgt--------gggacttt-caattatactgcattgatctatatgtgtttgtttatctcagtatcacaatcttttgatttagtggagcttccgaggagggttttaaaactgggaagtg----------aaattcctccaattttttttttaagattgttttgactatattgggtctttgcattttcatgtaaa-ttttaggaacagcttgtcaattgccacaaaaagcttgctggaatttttacaggtgttgaattgaatgtatgtatcaatttcacatgaattttcatctttaaaatgttgacttttccaaagcatacacgtggattgtttctctatttagtatgatcaccattcatttctttcagca i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8322703 394 + 10161646 gcatctttgtggataaacaattgactgtaagccttagtgtttatctgt--------gggacttt-caattatactgcattgatctatatgtgtttgtttatctcagtatcacaatcttttgatttagtggagcttctgaggagggttttaaaaatgggaagtg----------aaattcctccaattttttttttaagattgttttgactatattgggtctttgcattttcatgtaaa-ttttaggaacagcttgtcaattgccacaaagagcttgctggaatttttacaggtgttgaattgaatgtatgtatcaatttcacatgaattttcatctttaaaatattgacttttccaaagcatacacgtggattgtttctttatttagtatgatcaccattcatttctttcagca i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1352238 393 + 3144229 gcatctttgtggataaacaattgactgtaagccttagtgtttatctgt--------gggacttt-caattatactgcattgatctatatgtgtttgtttatctcagtatcacaatcttttgatttagtggagcttctgagta-agttttaaaaatgggaagtg----------aaattcctccaattttttttttaagattgttttgactatattgggtctttgcattttcatgtaaa-ttttaggaacagcttgtcaattgccacaaaaagcttgctggaatttttacaggtgttgaattgaatgtatgtatcaatttcacatgaattttcatctttaaaatattgacttttccaaagcatacacgtgggttgtttctctatttagcatgatcactattcatttctttcagca i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96631547 391 + 98384682 gcatctttgtggataaacaattgactgtaagccttagtgtttatctgt--------gggatttt-caattatactccattgatctatatgtgtttgtttatctcagtatcacaatc--ttgatttagtggagcttctgagta-agttttaaaaatgggaagtg----------aaattcctccaa-tttttttttaagattgttttgactatattgggtctttacattttcatgtaaatttttaggaacagcttgtcaattgccacaaaaagtttgctggaatttttataggtgttgaattgaatgtatgtatcaatttcacaggaattttcatctttaaaatattgacttttccaacgcatacacgtggattgtttctctatttagtatgatcaccattcatttctttaagca i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8175896 393 - 10857215 gcatctttgtggataaacaattgactgtaagccttagtgtttatctgt--------gggacttt-caattatactacattgatctatatgtgtttgtttatctcagtatcacaatcttttgatttagtggagcttctgagta-agttttaaaaatgggaagtg----------aaattcctccaattttttttttaagattgttttgactatattgggtctttgcattttcatgtaaa-ttttaggaacaacttgtcaattgccacaaaaagcttgctggaatttttacaggtgttgaattgaatgtatgtatcaatttcacatgaattttcatctttaaaatattgacttttccaaagcatacacgtgggttgtttctctatttactatgatcactattcatttctttcagca i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15569904 391 - 23502949 gcatctttgtagaaaaacaattgactgtaagccttagtgtttatctgt--------gggatgtc-caattataccccattgatctatatgtgtttgtttatctcagtatcacaatcttttgatttagtggagcttccgagtc-agttctaaaaatgggaagtg----------aaattcctccaa-tttttttttaagattgttttgactatatcgggtctttgcattttcatgtaaa-ttttaggaacagcttgtcaattgccacaaaaagcttgcc-gaatttttacaggtgttgaattgaatgtatgtatcaatttcacatgaattttcatctttaaaatattgacttttccaatgcatacacgtggattgtttctctatttaatatgatcaccattcatttctttcagca i colAng1.NW_012114488v1 C 0 C 0 s dasNov3.JH569188 504119 386 + 760995 GTGcctttgtagaaaatctattgaccataa---ttagtgtctgtttct--------agactctt-ga--tgtgttccattcatccttatgtctatctttataccagtatcattttctcataatttattaaagctgcagagta-agtttggaaaatgggaaatggacgatctccaaattttttca--tcttttttgagagtttttttgaccatttcagatatttggatttccatataaa-ttttgggatcaacttttcaattgtcacaaaaagtt-----gaaattttacaagt-----atttcatctatgtaacaatttgatgagaatttctatcttaataatattgaactttccaagccacgagcatgggatgcctgtgcattgattgtaatctctaggaatttttgtcagca i dasNov3.JH569188 I 7099 I 521 e otoGar3.GL873575 10924240 3001 - 12073884 I e saiBol1.JH378287 1254638 1077 - 2905041 I e aotNan1.NW_018494782v1 1459982 2287 - 1813869 I e cebCap1.NW_016107695v1 1210710 1179 - 2164891 I e calJac3.chr4 169835668 35 + 171630274 I e canFam3.chr1 56141435 1862 + 122678785 I a score=3675907.000000 s hg38.chr6_KB021644v2_alt 35060 700 + 185823 tattctacagcaagctcgtccaacccacggcctgaaagtcacatgcggcccaggacagcattgaatgcagcccaatgcaaatttgcaaactgtcttaaaacatag---------attttttttttttgc--------ga------------ttttttttttttaaagctcatcagctattggtagtgttagtgtattttatgtgtagcccaagacaattctttttccagtgtggcacagggaagtcaaaatattagacacccttgttctataggtttcaatgtaaacatcttaccttctttcgaaagtttatttctaagtattttatcctttttaatgtgaatggaatagttttctgaatttcatttttggaccattcattgatagtatgtagaagtgaaattgTCATTGTTATCGCCATCttctt------ttttatattattttattatttttttgagatggactttctctcttgtcacccaggctggagtgcaatggctcgatctctggtcaccacaacc-ctgcctgcctggttcaagtgattctccagcctcagcctcccaagtagttgggattacaggtgcgcgccatcacgcccagctaatttttgtatttttagtagagacagggtttcactatgttggccagactggtctgaaactccagacctcaagtgatccacccaccatggcctcccaaagtgctggga-----ttaccggcgtgagccaccgcgccc s panTro5.chr6 173501459 704 + 175400573 tattctacagcaagcttgttcaacccacggcctgaaagtcacatgcggcccaggacagctttgaatgcagcccaatgcaaatttgcaaactgtcttaaaacatagg--------agattttttttttcc--------ga------------tttttttttt---aagctcatcagctgttgttagtgttagtgtattttatgtgtagcccaagacaattctttttccagtgtggcacagggaagtcaaaatattagacacccttgttctataggtttcagtgtaaacatcttaccttcttttgaaagtttatttctaagtattttatcctttttaatgtgaatggaatcgttttctgaatttcatttttggaccattcattgatagtatgtagaagtgaaattgtcattgttatcaccatcttcttcttcttttttttattatttttttacttttttgagatggactttctctcttgtcacacaggctggagtgcaatggctccatctttggtcaccacaccc-ctgcctgcctggttcaagtgattctccagcctcagcctcccaagtagttgggattacaggtgcccgccatcacgcccagctaatttttgtatttttagtagagacggggtttcagtatgttggccagactggtctgaaactccagacctcaagtgatccgcccaccatggcctcccaaagtgctggga-----ttaccgacgtgagccaccgcgccc i panTro5.chr6 C 0 C 0 s panPan2.chr6 171751822 703 + 173848474 tattctacagcaagcttgtccaacccacggcctgaaagtcacatgcggcccaggacagctttgaatgcagcccaatgcaaatttgcaaactgtcttaaaacatag---------gagatttttttttcc--------ga------------tttttttttt---aagctcatcagctattgttagtgttagtgtattttatgtgtagcccaagacaattctttttccagtgtggcacagggaagtcaaaatattagacacccttgttctataggtttcaatgtaaacatcttaccttctttcgaaagtttatttctaagtattttatcctttttaatgtgaatggaatcgttttctgaatttcatttttggatcattcattgatagtatgtagaagtgaaattgTCATTGTTATCACCATCTTCTTCttcttttttttattatttttttactattttgagatggactttctctcttgtcacacaggctggagtgcaatggctccatctttggtcaccacaccc-ctgcctgcctggttcaagtgattctccagcctcagcctcctaagtagttgggattacaggtgcccaccatcacgcccagctaatttttgtatttttagtagagacggggtttcagtatgttggccagactggtctgaaactccagacctcaagtgatccgcccaccatggcctcgcaaattgctggga-----ttacaggcacgagccaccgcgccc i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11438233 707 - 12463322 tattctacagcaagcttgtccaacccacggcctgaaagtcacatgcggcccaggacagctttgaatgtagcccaatgcaaatttgcaaactgtcttaaaacatagga-------gatttttttttttcc--------ga------------tttttttttttt-aagctcatcagctattgttagtgttagtgtattttatgtgtagcccaagacaattctttttccagtgtggcacagggaagtcaaaatattagacacccttgttctataggtttcaatgtaaacatcttaccttctttcgaaagtttatttctaagtattttatcctttttaatgtgaatggaatagttttctgaatttcatttttggaccattcattgatagtatgtagaagtgaaattgtcattgttatcaccatcttcttcttcttttttttattattttttaattcttttgagatggtctttctctcttgtcacacaggctggagtgcaatggctcgatctctggtcaccacaccc-cttcctgcctggttcaactgattctccagcctcagcctcccaagtagttgggattacaggtgcccgccatcacacccagctaatttttgtatttttagtagagacagggtttcactatgttggccagactggtctgaaactccagacctcaagtgatccgcccaccatggcctcccaaagtgctggga-----ttacaggcgtgagccaccgcgccc i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156258363 697 + 157873769 tattctatagcaagcttgtccaacccatgtcctgaaagtcac------------acaactttgaatgcagcccaatgcaaatttgcaaactgtcttaaaacatgagatttttttgtttgttttttgttt--------gt------------ttgtttgttttt-tagctcatcagctattgttagtgttagtgtattttatgtgtggcccaagacaattcttcttccagtgtggcacagggaagtcaaaatattagacacccttgttctataggtttcaatgtgaacatcttatctcgttttgaaagtttatttctaagtattttatcctttttaatgtgaatggaatcgttttctgaatttcatttttggaccattcattgatagtatgtagtagtgaaattgTCATTGTTATCACCATCTTCttcttcttttttt--ttatttttttatt-tcttgagatggtgtttctctc--atcacacaggctggagtgcaatggcttgatctccggtcactgcaccctccacctcccaggttcaactgattctccagcctcagcctcccaagtagtttggattacaggcgcctaccaccacacccagctaatttttgta-ttttggtagagacagggtttcaccatgttggccagactggtctcaaactcctgacctcaggtgatccgcccaccttggcctcccaaagtgctggga-----ttacaggcatgagccaccacgacc i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170290241 697 + 172585720 cattctacagcaagcttgtccag-ccatggcctgaaagtcacatgcggcccaggacagctttgaatgcagcccaatgcaaatttgtgaactgtcttacaacataa---------gagatttttcttggc--------ga------------ttttttttttct-tagctcatcagctcttgttagtgttaatgtattttatgtgtggcccaagacaattcttattccaatgtggcacagagaagtcaaaatattagacacccttgttctataggtttcaatgtaaacatcttaccttcttttgaaagtttatttctaagtattttatcctttttaatgtgaacggaatacttttctgaatttcatttttggactattcattgatagtatgtagaagtgaaattgtcattgttatcaccatcttcttcttcttcattt------------atttttttgagatggagtttctc-cttgtcacccaggctggagtgcaatggctcgatctccggtcaccacaccctctgcctcccaggttcaagtgattctccagcctcagcctcccaagtagttgggattgcaggtgcctgccaccatgcccggctaatttttgtatttgtagtagagacggggtttcaccatgttggccaagctggtcttgaactccctacctcaggtgatccgcccaccttggcctcccaaagtgctgggagtaagttacaggcatgagacaccgctccc i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169035843 697 - 170955103 cattctacagcaagcttgtccag-ccatggcctgaaagtcacatgcggcccaggacagctttgaatgcagcccaatgcaaatttgtgaactgtcttacaacataa---------gagatttttcttggc--------ga------------ttttttttttct-tagctcatcagctcttgttagtgttaatgtattttatgtgtggcccaagacaattcttattccaatgtggcacagagaagtcaaaatattagacacccttgttctataggtttcaatgtaaacatcttaccttcttttgaaagtttatttctaagtattttatcctttttaatgtgaacggaatacttttctgaatttcatttttggactattcattgatagtatgtagaagtgaaattgTCATTGTTATCACCATCttcttcttcttcattt------------atttttttgagatggagtttctc-cttgtcacccaggctggagtgcaatggctcgatctccggtcaccacaccctctgcctcccaggttccagtgattctccagcctcagcctcccaagtagttgggattgcaggtgcctgccaccatgcccggctaatttttgtatttgtagtagagacggggtttcaccatgttggccaagctggtcttgaactccctacctcaggtgatccgcccaccttggcctcccaaagtgctgggagtaagttacaggcatgagacaccgctccc i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8323097 697 + 10161646 cattctacagcaagcttgtccag-ccatggcctgaaagtcacatgcggcccaggacagctttgaatgcagcccaatgcaaatttgtgaactgtcttacaacataa---------gagatttttcttggc--------ga------------tttttttttttt-tagctcatcagctgttgttagtgttaatgtattttatgtgtggcccaagacaattcttattccaatgtggcacagagaagtcaaaatattagacacccttgttctataggtttcaatgtaaacatcttaccttcttttgaaagtttatttctaagtattttatcctttttaatgtgaacggaatacttttctgaatttcatttttggactattcattgatagtatgtagaagtgaaattgTCATTGTTATCACCATCttcttcttcttcattt------------atttttttgagatggagtttctc-cttgtcacccaggctggagtgcaatggctcgatctccggtcaccacaccctctgcctcccaggttcaagtgattctccagcctcagcctcccaagtagttgggattgcaggtgcctgccaccatgcccggctaatttttgtatttgtagtagagatggggtttcaccatgttggccaagctggtcttgaactccctacctcaggagatccacccaccttggcctcccaaagtgctgggagtaagttacaggcatgagacaccgctccc i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1352631 704 + 3144229 cattctacagcaagcttgtccag-ccacggcctgaaagtcacatgcggcccaggacagctttgaatgcagcccagtgcaaatttgtgaactgtcttacaacatag---------gagatttttcttggc--------ga-----ttttttttttttttttttt-tagctcatcagctgttgttagtgttaatgtattttatgtgtggcccaagacaattcttattccaatgtggcacagagaagtcaaaatattagacacccttgttctataggtttcaatgtaaacatcttaccttcttttgaaagtttatttctaagtattttatcctttttaatgtgaacggaatactttcctgaatttcatttttggactattcattgataatatgtagaagtgaaattgtcattgttatcaccatcttcttcttcttttttt------------atttttttgagatggagtttctc-cttgtcacccaggctggagtgcaatggctcgatctccggtcaccacaccctctgcctcccaggttcaagtgattctccagcctcagcctcccaagtagttgggattgcaggtgcctgccaccacgtccagctaatttttgtatttgtagtagagacggggtttcaccatgttggccaggctggtcttgaactccctacctcaggtgatccgcccaccttggcctcccaaagtgctgggagtaagttacaggcatgagacaccgctccc i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96631938 708 + 98384682 tattccacagcaaacttgtccag-ccacggcctgaaagtcacatgcggcccaggacagctttcaatgcagcccagtgcaaatctgtgaactgtcttacaacatag---------gagatttttcttggccttttttttt---------ttttttttttttttt-tagctcatcagctgttgttagtgttaatgtattctatgtgtggcccaagacaattcttcttccaatgtggcacagggaagtcaaaatattagacacccttgttctataggtttcaatgtaaacatcttaccttcttttgaaagtttatttctaagtattttatcctttttaatgtgaatggaatacttttctgaatttcatttttggactattcattgatagtatgtagaagtgaaattgTCATTGTTATCACCATCttcttcctctttttta------------atttttttgagatggagtttctc-cttgtcacccaggctggagtgcaatggctcgatctctggtcaccacacactctgcctcccaggttcaagtgattctccagcctcagcctcccaagtagttgggatcgcaggtgcctgccaccacacccagctaatttttgtatttgtagtagagacggggtttcaccatgttggccaggctggtcttgaactccctacctcaggtgatccacccaccttggcctcctaacgtgctgggagtagattccaggcgtgagacaccactccc i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8176289 700 - 10857215 cattctacagcaagcttgtccag-ccacggcctgaaagtcacatgcggcccaggacagctttgaatgcagcccagtgcaaatttgtgaactgtcttacaacatag---------gagatttttcttggc--------ga---------ttttttttttttttt-tagctcatcagctgttgttagtgttaatgtattttatgtgtggcccaagacaattcttattccaatgtggcacagagaagtcaaaatattagacacccttgttctataggtttcaatgtaaacatcttaccttcttttgaaagtttatttctaagtattttatcctttttaatgtgaacggaatacttttctgaatttcatttttggactattcattgatagtatgtagaagtgaaattgTCATTGTTATCACCATCttcttcttcttttttt------------atttttttgagatggagtttctc-cttgtcacccaggctggagtgcaatggctcgatctctggtcaccacaccctctgcctcccaggttcaagtgattctccagcctcagcctcccaagtagttgggattgcaggtgcctgccaccacgcccggctaatttttgtatttgtagtagagacggggtttcaccatgttggccaggctggtcttgaactccctacctcaggtgatccgcccaccttggcctcccaaagtgctgggagtaagttacaggcatgagacaccgctccc i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15570295 710 - 23502949 tattctacagcaagcttgtccag-ccacggcctgaaagtcacatgcggcccaggacagctttgaatgcagcccaatgcaaatttgtgaactgtcttacaacatag---------gagatttttcttggc--------gattttttttttttttttttttttgt-tagctcatcagctattgttagtgttagtgtattttatgagtggcccaagacaattcttcttccagtgtggcacagggaagtcaaaatattagacacccttgttctataggtttcaatgtaaacaccttaccttcttttgaaagtttatttctaagtattttatcctttttaatgtgaatggaatacttttctggatttcatttttggactattcattgatagtatgtagaagtgaaattgTCATTGTTACCACCATCttcttcttcttttttt------------atttctttgagatggagtttctctcttgtcacccaggctggagtgcaatggctggatctccagtcaccacaccctctgcctcccaggttcaagtgattctccagcctcagcctcccaagtagttgggattgcaggtgcctgccaccacgcccagctaatttttgtatttgtagtagagatggtgtttcaccatgttggtcaggctggtcttgaaccccctacctcaggtgatctgcccaccttggcctcccaaagtgctaggattagattacaggtgtgagacaccgctccc i colAng1.NW_012114488v1 C 0 C 0 e otoGar3.GL873575 10924240 3001 - 12073884 I e saiBol1.JH378287 1254638 1077 - 2905041 I e aotNan1.NW_018494782v1 1459982 2287 - 1813869 I e cebCap1.NW_016107695v1 1210710 1179 - 2164891 I e calJac3.chr4 169835668 35 + 171630274 I e dasNov3.JH569188 504505 521 + 760995 I e canFam3.chr1 56141435 1862 + 122678785 I a score=-2373.000000 s hg38.chr6_KB021644v2_alt 35760 2 + 185823 A-T s panTro5.chr6 173502163 2 + 175400573 a-c i panTro5.chr6 C 0 C 0 s panPan2.chr6 171752525 2 + 173848474 A-C i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11438940 2 - 12463322 a-c i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156259060 3 + 157873769 agc i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170290938 3 + 172585720 agc i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169036540 3 - 170955103 agc i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8323794 3 + 10161646 agc i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1353335 3 + 3144229 agc i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96632646 3 + 98384682 agc i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8176989 3 - 10857215 agc i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15571005 3 - 23502949 agc i colAng1.NW_012114488v1 C 0 C 0 s cebCap1.NW_016107695v1 1211889 2 - 2164891 -AT i cebCap1.NW_016107695v1 I 1179 C 0 e otoGar3.GL873575 10924240 3001 - 12073884 I e saiBol1.JH378287 1254638 1077 - 2905041 I e aotNan1.NW_018494782v1 1459982 2287 - 1813869 I e calJac3.chr4 169835668 35 + 171630274 I e dasNov3.JH569188 504505 521 + 760995 I e canFam3.chr1 56141435 1862 + 122678785 I a score=146778.000000 s hg38.chr6_KB021644v2_alt 35762 21 + 185823 CACCGTCTTCTTCTTGATTGG s panTro5.chr6 173502165 21 + 175400573 caccaacttcttcttgattgg i panTro5.chr6 C 0 C 0 s panPan2.chr6 171752527 21 + 173848474 CACCAACTTCTTCTTGATTGG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11438942 18 - 12463322 caccaa---cttcttgtttgg i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156259063 21 + 157873769 cACCATCTTCTTCTTGATTGG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170290941 21 + 172585720 caccatcttcttctggattgg i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169036543 21 - 170955103 cACCATCTTCTTCTGGATTGG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8323797 21 + 10161646 cACCATCTTCTTCTGGATTGG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1353338 21 + 3144229 caccatcttcttctggattgg i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96632649 21 + 98384682 cACCATCTTCTTCTGGATTGG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8176992 21 - 10857215 cACCATCTTCTTCTGGATTGG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15571008 21 - 23502949 cACCATCTTCTTCTGGATTGG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169835703 21 + 171630274 CGCCATCTTCTTCTTGACTGG i calJac3.chr4 I 35 C 0 s cebCap1.NW_016107695v1 1211891 21 - 2164891 CACCATCTTCTTCTTGATTGG i cebCap1.NW_016107695v1 C 0 C 0 e otoGar3.GL873575 10924240 3001 - 12073884 I e saiBol1.JH378287 1254638 1077 - 2905041 I e aotNan1.NW_018494782v1 1459982 2287 - 1813869 I e dasNov3.JH569188 504505 521 + 760995 I e canFam3.chr1 56141435 1862 + 122678785 I a score=120795.000000 s hg38.chr6_KB021644v2_alt 35783 15 + 185823 CCTTGTATGTAAAT-G s panTro5.chr6 173502186 15 + 175400573 ccttgtatgtaaat-g i panTro5.chr6 C 0 C 0 s panPan2.chr6 171752548 15 + 173848474 CCTTGTATGTAAAT-G i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11438960 15 - 12463322 ccttgtatgtaaat-g i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156259084 16 + 157873769 CCttgaatataaatgg i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170290962 15 + 172585720 ccttgtatataaat-g i rheMac8.chr4 C 0 I 1 s macFas5.chr4 169036564 15 - 170955103 CCttgtatataaat-g i macFas5.chr4 C 0 I 1 s macNem1.NW_012011000v1 8323818 15 + 10161646 CCTTGTATATAAAT-G i macNem1.NW_012011000v1 C 0 I 11 s cerAty1.NW_012002071v1 1353359 15 + 3144229 ccttgtatataaat-g i cerAty1.NW_012002071v1 C 0 I 1 s chlSab2.chr13 96632670 15 + 98384682 CCttgtatataaat-g i chlSab2.chr13 C 0 I 1 s manLeu1.NW_012106474v1 8177013 15 - 10857215 CCttgtatataaat-g i manLeu1.NW_012106474v1 C 0 I 1 s colAng1.NW_012114488v1 15571029 15 - 23502949 CCttgtatataaat-g i colAng1.NW_012114488v1 C 0 I 1 s calJac3.chr4 169835724 15 + 171630274 CCTTGTAGATAAAT-G i calJac3.chr4 C 0 I 1 s cebCap1.NW_016107695v1 1211912 15 - 2164891 CAttgtatataaat-g i cebCap1.NW_016107695v1 C 0 I 1 s dasNov3.JH569188 505026 15 + 760995 ttttgaatataaat-g i dasNov3.JH569188 I 521 C 0 e otoGar3.GL873575 10924240 3001 - 12073884 I e saiBol1.JH378287 1254638 1077 - 2905041 I e aotNan1.NW_018494782v1 1459982 2287 - 1813869 I e canFam3.chr1 56141435 1862 + 122678785 I a score=80189.000000 s hg38.chr6_KB021644v2_alt 35798 12 + 185823 AAAGCCtgggta s panTro5.chr6 173502201 12 + 175400573 aaagcctgggta i panTro5.chr6 C 0 C 0 s panPan2.chr6 171752563 12 + 173848474 AAAGCCtgggta i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11438975 12 - 12463322 aaagcctgggta i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156259100 12 + 157873769 aaagcctgggta i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170290978 12 + 172585720 aaagcctgggta i rheMac8.chr4 I 1 C 0 s macFas5.chr4 169036580 12 - 170955103 aaagccggggta i macFas5.chr4 I 1 C 0 s cerAty1.NW_012002071v1 1353375 12 + 3144229 aaagcctgggta i cerAty1.NW_012002071v1 I 1 C 0 s chlSab2.chr13 96632686 12 + 98384682 aaagcctgggta i chlSab2.chr13 I 1 C 0 s manLeu1.NW_012106474v1 8177029 12 - 10857215 aaagcctgggta i manLeu1.NW_012106474v1 I 1 C 0 s colAng1.NW_012114488v1 15571045 12 - 23502949 aaaacctgggta i colAng1.NW_012114488v1 I 1 C 0 s calJac3.chr4 169835740 12 + 171630274 AAAGCCtgggta i calJac3.chr4 I 1 I 3 s cebCap1.NW_016107695v1 1211928 12 - 2164891 aaagcctgggta i cebCap1.NW_016107695v1 I 1 I 3 s dasNov3.JH569188 505041 9 + 760995 gcatccttg--- i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10924240 3001 - 12073884 I e saiBol1.JH378287 1254638 1077 - 2905041 I e aotNan1.NW_018494782v1 1459982 2287 - 1813869 I e canFam3.chr1 56141435 1862 + 122678785 I e macNem1.NW_012011000v1 8323833 11 + 10161646 I a score=13031.000000 s hg38.chr6_KB021644v2_alt 35810 2 + 185823 tc s panTro5.chr6 173502213 2 + 175400573 tc i panTro5.chr6 C 0 C 0 s panPan2.chr6 171752575 2 + 173848474 tc i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11438987 2 - 12463322 tc i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156259112 2 + 157873769 tc i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170290990 2 + 172585720 tc i rheMac8.chr4 C 0 I 3 s macFas5.chr4 169036592 2 - 170955103 tc i macFas5.chr4 C 0 I 3 s cerAty1.NW_012002071v1 1353387 2 + 3144229 tc i cerAty1.NW_012002071v1 C 0 I 3 s chlSab2.chr13 96632698 2 + 98384682 tc i chlSab2.chr13 C 0 I 3 s manLeu1.NW_012106474v1 8177041 2 - 10857215 tc i manLeu1.NW_012106474v1 C 0 I 3 s colAng1.NW_012114488v1 15571057 2 - 23502949 tc i colAng1.NW_012114488v1 C 0 I 3 s calJac3.chr4 169835755 2 + 171630274 tt i calJac3.chr4 I 3 C 0 s saiBol1.JH378287 1255715 2 - 2905041 tt i saiBol1.JH378287 I 1077 C 0 s cebCap1.NW_016107695v1 1211943 2 - 2164891 tt i cebCap1.NW_016107695v1 I 3 C 0 e otoGar3.GL873575 10924240 3001 - 12073884 I e aotNan1.NW_018494782v1 1459982 2287 - 1813869 I e dasNov3.JH569188 505050 0 + 760995 C e canFam3.chr1 56141435 1862 + 122678785 I e macNem1.NW_012011000v1 8323833 11 + 10161646 I a score=6499573.000000 s hg38.chr6_KB021644v2_alt 35812 802 + 185823 ctcctgctcctgatttta-gggggaa--cattctgcttttctccgttaagcatgctgttaaccgtgggtttttcacagatacgttttatcacattggggaagttgtct-cctattactagtttgttgagaatttattccctgagtggatgttg-aattttgtcaaatgc-tttttt---ttt-gtcattcattgagataatcatgt-atttttgtcctttattaaaatgctgtattacattacttgatatttggatgttgtaccaaccttgcagtcctgatttaa-atcctactaagttatgatatatcatatttttatatgttgccaagttcagttt-tctagtattttgttgagaattttttgcatatgggttcaca----ggaaacattggtctatggttttcttttttcatgatatttttctctggctttgatatcagaataatactggctttatagaatgagttgggaagtattcttttctcttctacattctaaaataattttgtgaagaattagtatta---gttctttaagtctttggtagaatttgtcc-tgaagccatctgtgcctcagatttcctttgtgggttggaagatttttcattattaattc----tttttatttcccatagaaatattctgag---tttttttgttttgagtcattttcggtaatttgcatggccagaaatttgttcatttttatctaaa-----tatct-atttgttggcctaaatgtgtt-----------------------------------------ctgtttttcctcattattcttttggcttctataaggtgggtagtcatgtttacttttttattcctgattttggtaatttttttcttt-- s panTro5.chr6 173502215 802 + 175400573 ctcctgctcctgatttta-gggggaa--cattctgcttttctccgttaagcatgctgttaaccatgggtttttcacagatacgttttatcatattggggaagttgtct-cctattactagtttgttgagaatttattccgtgagtggatgttg-aattttgtcaaatgc-tttttt---ttt-gtcattcattgagataatcatgt-gtttttgtcctttattaaaatgctgtattacattacttgatatttggatgttgcaccaaccttgcagtcctgatttaa-atcctactaagttatgatataccatatttttatatgttgccaagttcagttt-tctagtattttgttgagaattttttgcatctgggttcaca----ggaaacattggtctatggttttcatttttcatgatatttttctctggttttgatatcagaataatactggctttatagaataagttgggaagtattcttttctcttctacattctaaaataattttgtgaagaattagtatta---cttctttaagtctttggtagaatttgtcc-tgaagccatctgtgcctcagatttcctttgtgggttggaagatttttcattattaattc----tttttatttctcatagaaatattctgag---tttttttgttttgagtcattttcggtaatttgcgtggccagaaatttgttcatttttatctaaa-----tatct-acttgttggcctaaatgtgtt-----------------------------------------ctgtttttcctcattattcttttggcttctataaggtgggtagtcatgtttacttttttattcctgattttggtaatttttttcttt-- i panTro5.chr6 C 0 C 0 s panPan2.chr6 171752577 801 + 173848474 ctcctgctcctgatttta-gggggaa--cattctgcttttctccattaagcatgctgttaaccatgggtttttcacagatacgttttatcatattggggaagttgtct-cctattactagtttgttgagaatttattccgtgagtggatgttg-aattttgtcaaatgc--ttttt---ttt-gtcattcattgagataatcatgt-gtttttgtcctttattaaaatgctgtattacattacttgatatttggatgttgcaccaaccttgcagtcctgatttaa-atcctactaagttatgatataccatatttttatatgttgccaagttcagttt-tctagtattttgttgagaattttttgcatctgggttcaca----ggaaacattggtctatggttttcatttttcatgatatttttctctggttttgatatcagaataatactggctttatagaataagttgggaagtattcttttctcttctacattctaaaataattttgtgaagaattagtatta---cttctttaagtctttggtagaatttgtcc-tgaagccatctgtgcctcagatttcctttgtgggttggaagatttttcattattaattc----tttttatttctcatagaaatattctgag---tttttttgttttgagtcattttcggtaatttgcgtggccagaaatttgttcatttttatctaaa-----tatct-acttgttggcctaaatgtgtt-----------------------------------------ctgtttttcctcattattcttttggcttctataaggtgggtagtcatgtttacttttttattcctgattttggtaatttttttcttt-- i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11438989 796 - 12463322 ctcctgctcctgatttta--ggggaa--cattctgcttttctccattaagcatgctgttaaccatgggtttttcacagatacgttttgtcacattggggaagttgtct-cctgttactagtttgttgagaatttattccgtgagtggatgttg-aattttgtcaaatgc-tttttt---ttt-gtcattcattgagataatcatgt-atttttgtcctttattaaaatgctgtattacattacttgatatttggatgttgcaccaaccttgcagtcctgatttaa-atcctactaagttgtgatatatcatatttttatatgttgccgagttcagttt-tctggtattttgttgagaattttttgcatctgggttcaca----ggaaacattggtctatggttttcttttttcatgatatttttctctggttttgatatcagaataatactggctttatagaatgagttgggaagtattcttttctcttctacattctaaaataatttggtgaagaattagtatta---cttctttaagtctttggtagaatttgtcc-tgaagccatctgtgcctcagatttcctttgtgggttggaagatttttcattattaattc----tttttatttctcatagaaatattctgag---tttttttgttttgagtcattttcggtaatttgcgtggccagaaatttgttcatttttatctaaa-----tatct-acttgttggcctaaatatgtt-----------------------------------------ctgtttttcctcattattcttttggcttctataaggtgggtagtcatgtttacttttttattcctgattttggtaattt-----ttt-- i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156259114 800 + 157873769 ctt---ctcctgatttta-gggggaa-ccattctgcttttctctgttaagtacgctgttaactgtgggtttttcacagatgcgttttatcacattggggaagttgtct-cctattactagtttgttgagaatttattccatgagtggatgttg-aatttcgtcaaatgc-tttttt---tttggtcattcattgagataatcatgt-atttttgtcctttattaaaatgctgcattatattacttgatatttggatgttgcaccaaccttgcagtcctaatctaa-atcctactaagtgatgatatatcatatttttatatgttgccgaattcagttt-tctagtattttgttgagaattttttgcacctgggttcaca----agaaacattggtctatggttttcttttttcatgatatttttctctggttttgatatcagaataatactggctttatagaatgagttgggaagtattcttttctcttctacgttctaaaagagttttgtgaagaattagtatta---cttctttaagtctttggtagaatttgtct-tgaagccacctatgcctcagatttcctttgtgggttggaagatttttcattattaattc----tttttgtttctcatagaaatattctgag----ttttttgttttgagtcatttttggtaatttgtgttgccagaaatttgttcatttttatttaaa-----tatct-acttgttggcctaaatgtgtt-----------------------------------------ctgtttctcttcattattcttttggcttccataaggtgggtagtcatgtttactttcttattcccgattttggtaatttttttcttt-- i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170290995 778 + 172585720 ctcctgttcctgatttta-ggggggaatcattctgcttttctctgttaagtatgctgttaaccgtgggtttttcacagatacattttatcacattggggaagttgtct-cctattactagcttgttgagaatttattccatgagtggatgttg-aattttgtcaaatgc-ttttct--tttt-ttcattcattgagataatcatgt-atttttgtccttcattaaaatgctgtattacattacttgacatttggatgttgcagcaaccttgcagtcctaatctaa-atcctgctaagttatgatatatcgtatttttatatgttgccgagttcagttt-tctagtattttgttgataattttttgcatctggg------------------------------ttcttttttcatgacttttttttctggttttggtatcagaataatactggctttatagaatgagttgggaagtattcttttctcttctatgttctaaaataattttgtgaagaattagtatta---cttccttcagtctttggtagaatttgtcc-caaagccatctgtgcttcagatttcctttgtggattgaaagatgtttcattgttaattc----tttttatttctcatagaaatattctgag--ctttttttgttttgagggatttttggtaatttgtgtcaccagaaatttgttcattttcatctaaa-----tatct-atttgttggcctaaatgtgtt-----------------------------------------ctgttttctctcattattcttttggcttctataaagtgggtagtcatgtttacttttttattcctgattttggtaatttttgtct---- i rheMac8.chr4 I 3 C 0 s macFas5.chr4 169036597 778 - 170955103 ctcctgttcctgatttta-ggggggaatcattctgcttttctctgttaagtatgctgttaaccgtgggtttttcacagatacattttatcacattggggaagttgtct-cctattactagcttgttgagaatttattccatgagtggatgttg-aattttgtcaaatgc-ttttct--tttt-ttcattcattgagataatcatgt-atttttgtccttcattaaaatgctgtattacattacttgacatttggatgttgcagcaaccttgcagtcctaatctaa-atcctgctaagttatgatatatcgtatttttatatgttgccgagttcagttt-tctaggattttgttgataattttttgcatctggg------------------------------ttcttttttcatgacttttttttctggttttggtatcagaataatactggctttatagaatgagttgggaagtattcttttctcttctatgttctaaaataattttgtgaagaattagtatta---cttccttcagtctttggtagaatttgtcc-caaagccatctgtgcttcagatttcctttgtggattgaaagatgtttcattgttaattc----tttttatttctcatagaaatattctgag--ctttttttgttttgagggatttttggtaatttgtgtcaccagaaatttgttcattttcatctaaa-----tatct-atttgttggcctaaatgtgtt-----------------------------------------ctgttttctctcattattcttttggcttctataaagtgggtagtcatgtttacttttttattcctgattttggtaatttttgtct---- i macFas5.chr4 I 3 C 0 s macNem1.NW_012011000v1 8323844 778 + 10161646 ctcctgttcctgatttta-ggggggaatcattctgcttttctctgttaagtatgctgttaaccgtgggtttttcacagatacattttatcacattggggaagttgtct-cctattactagcttgttgagaatttattccatgagtggatgttg-aattttgtcaaatgc-ttttct--tttt-ttcattcattgagataatcatgt-atttttgtccttcattaaaatgctgtattacattacttgacatttggatgttgcagcaaccttgcagtcctaatctaa-atcctgctaagttatgatatatcgtatttttatatgttgccgagttcagttt-tctagtattttgttgataattttttgcatctggg------------------------------ttcttttttcatgacttttttttctggttttggtatcagaataatactggctttatagaatgagttgggaagtattcttttctcttctatgttctaaaataattttgtgaagaattagtatta---cttccttcagtctttggtagaatttgtcc-caaagccatctgtgcttcagatttcctttgtggattgaaagatgtttcattgttaattc----tttttatttctcatagaaatattctgag--ctttttttgttttgagggatttttggtaatttgtgtcaccagaaatttgttcattttcatctaaa-----tatct-atttgttgacctaaatgtgtt-----------------------------------------ctgttttctctcattattcttttggcttctataaagtgggtagtcatgtttacttttttattcctgattttggtaatttttgtct---- i macNem1.NW_012011000v1 I 11 C 0 s cerAty1.NW_012002071v1 1353392 779 + 3144229 ctcctgttcctgatttta-ggggggaatcattctgcttttctctgttaagtatgctgttaaccgtgggtttttcacagatacattttatcacattggggaagttgtct-cctattactagtttgttgagaatttattctgtgagtggatgttg-aattttgtcaaatgc-ttttttaaaatt-ttcattcattgagataatcatgt-atttttgtccttcattaaaatgctgtattacattacttggcatttggatgttgcagcaaccttgcagtcctaatctaa-atcctggtaagttatgatatatcatatttttatatgttgccgagttcagttt-tctagtattttgttgagaattttttgcatctggg------------------------------ttcttttttcatgac-tttttttctggttttggtatcagaataatactggctttatagaatgagttgggaagtattcttttctcttctatgttctaaaataattttgtgaagaattagtatta---cttccttcagtctttggtagaatttgtcc-tgaagccatctgtgcttcagatttcctttgtgaattggaagacttttcattattaattc----tttttatttctcatagaaatattctgat--ttttttttgttttgagtgatttttggtaatttgtgtcaccagaaatttgttcatttttatctaaa-----tatct-atttgttggcctaaatgtgtt-----------------------------------------ctgttttccctcattattcttttggcttctgtaaagtgggtagtcatgtttacttttttattcctgattttggtaatttttgtct---- i cerAty1.NW_012002071v1 I 3 C 0 s chlSab2.chr13 96632703 781 + 98384682 ctcctgttcctgatttta-ggggggaatcattctgcttttctctgttaagtttgctgttaaccgtgggtttttcacagatacattttatcacattggggaagttgtct-cctattactagcttgttgagaatttattccatgagtggatgttg-aattttgtcaaatgcttttttttttttt-ttcattcattgagataatcatgt-atttttgtccttcattaaaatgctgtattacattacttgacatttggatgttgcagcaaccttgcagtcctaatctaa-atcctgctaagttatgatatatcgtatttttatatgttgccgagttcagttt-tctagtattttgttgagaattttttgcatctggg------------------------------ttcttttttcatgac-tttttttctggttttggtatcagaataatactggctttatagaatgagttgggaagtattcttttctcttctatgttctaaaataattttgtgaagaattagtatta---cttctttcagtctttggtagaatttgtcc-tgaagccatctgtgcttcagatttcctttgtggattggaagatgtttcattgttaattc----tttttatttctcatagaaatattctgag-tttttttttgttttgagtgatttttggtaatttgtgtcaccagaaatttgtttattttcatctaaa-----tatct-atttgttggcctaaatgtgtt-----------------------------------------ctgttttctctcattattcttttggcttctataaagtgggtagtcatgtttacttttttattcctgattttggtaatttttgtct---- i chlSab2.chr13 I 3 C 0 s manLeu1.NW_012106474v1 8177046 781 - 10857215 ctcctgttcctgatttta-ggggggaatcattctgcttttctctgttaagtatgctgttaaccgtgggtttttcacagatacattttatcacattggggaagttgtct-cctattactagtttgttgagaatttattctgtgagtggatgttg-aattttgtcaaatgc-ttttttaaaatt-ttcattcattgagataatcatgt-atttttgtccttcattaaaatgctgtattacattacttggcatttggatgttgcagcaaccttgcagtcctaatctaa-atcctgctaagttatgatttatcatatttttatatgttgctgagttcagttt-tctagtattttgttgagaattttttgcatctggg------------------------------ttcttttttcatgac-tttttttctggttttggtatcagaataatactggctttatagaatgagttgggaagtattcttttctcttctatgttctaaaataattttgtgaagaattagtatta---cttccttcagtctttggtagaatttgtcc-tgaagccatctgtgcttcagatttcctttgtgaattggaagacttttcattattaattc----tttttatttctcatagaaatattctgagttttttttttgttttgagtgatttttggtaatttgtgtcaccagaaatttgttcatttttatctaaa-----tatct-atttgttggcctaaatgtgtt-----------------------------------------ctgttttccctcattattcttttggcttctgtaaagtgggtagtcatgtttacttttttattcctgattttggtaatttttgtct---- i manLeu1.NW_012106474v1 I 3 C 0 s colAng1.NW_012114488v1 15571062 771 - 23502949 ctcctattcctgatttta-gaggggaatcattctgcttttctctgttaagtatgatgttaaccgtgggttttt--cagatacattttatcacattggggaagttgtct-cctattactagtttgttgagaatttattccatgagtggatgttg-aattttgtcaaacgc-ttttttcttttt-ttcattcattgagataatcatgt-atttttgtccctcattaaaatgctgtattacattacttgacatttggatgttgcagcaaccttgcagtcctaatctaa-atcctgctaagttatggtatatcatatttttatatgttgccgagttcagttt-tctagtattttgttgagaattttttgcatctgga------------------------------ttcttttttcatgac--ttttttctagttttggtatcagaataatactggctttatagaatgagttgggaagtattctt-----ttctatgttctaaaataattttgtgaagaattagtatta---cttccttcagtctttggtagaatttgtcc-tgaagccatctgtgcttcagatttcctttgaggattggaagatttttcattattaattc----tttttatttctcatagaaatattctgag--ttttttttgttttgagtgatttttggtaatttgtgtcaccagaaatttgttcatttttatctaaa-----tatct-atttgttggcctaaatgtgtc-----------------------------------------ctgttttccctcattattcttttggcttctataaaatgggtggtcatgtttacttttttattcctgattttggtaatatttgtct---- i colAng1.NW_012114488v1 I 3 C 0 s calJac3.chr4 169835757 793 + 171630274 cttctgttcctgatttta--ggggagaccattctgcttttcttcattgtgtatgccgttaa-tgtgggtttttcacagatccggtttatcaccttggggaagttgtctccctattactactttgttgagaattgattctatgagtggatgttg-aattttgtcaactgc-tttgtt-------ttcattcattgaggtgattgtgt-atttttgtcctctattaaaatgctgtattacattaattgatatttggatgttgtaccaacctcgcagtcctaatct-a-atcctactaagtcaccatttatcatctttttatatactgccgagttcagctt-cctagtattttgctgatga-tttttgcatttctgttcaca----agagacattggtctatggt-ttcctttttcatgatatttttctctggttttgatgtgagaataatgctggctttgtggaatgag-tgggaagcattctt-----ttctacattctaacagagttttgtgaggaattagtgtc----gtgctttaagccttcggtagaatttctca-taaagtcatcagtgtctcagatttcctttgtgggttggaagatttttcattattaaagc----tttttatttctcatagaaatattccgag---tttctatgttttgaggtatgtttggaaatttgtgttgccagaaatgtgttcatttttatcttaactgtctaaat-atttgttggcacaaatgtgtt-----------------------------------------ctgtttttccctatgactctttcagtttctgtaaggtaggtaggcatgtttgcttttt--attctgattttggtaattgttgtcttt-- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1255717 796 - 2905041 cttctgttcctgatttta-gggggggactgttctgcttttctttgtgatgtatgctgctaa-tgtgggtttttcacagataggtgttatcacgttggggaagttttct-cctattactagtttgttgagaatttattctataagtggatgttg-aattttgtcaaatgcttttttt-------ttcattcattaagatgatcatat-atctttgtcctttattcaaatgctgtattacattaattggtatttggatgttgtagcaaccttgcagtcctaatct-a-atcctgctaagtcaccatatgtcatctttttatatattgctgagttcagttt-cctagtattttgctgagga-attttgcatttgtgttcaca----agagacattggtctatggt-tttctttttcataatatttttatttggttttgatatgagaataacactggctttatagaatgagtttggaagcattctt-----ttctacattctaacagagttctgtgaggaattagtgtca---atgctttaaggcttcggtagaatttgaca-taaagtcatctgtgcctcagatttcctttgtgggttggaagatttttcattattaattc----cttttatttctcatagaaatattctgag---tttctatgttttgagtcatttttggaaatttgtgttgtcagaaatttgttcatttttaacttaactgtctaaat-atttgttggtacaaatgtgtt-----------------------------------------ctgtttttccttatgattctttcggtttctataaggtaggtagtcatgtttacttttt--attctgattttggtaatttttgtcttt-- i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1211945 784 - 2164891 cttctgttcctgattttaggagggggaccattctgcttttcttcatgatgtatgctg------------ttttcacagatacgttttatcacgttggggaagctttct-tctgttactagtttgttgagaatttattctatgagtggatgttg-aatttcgtcaaatgc-tttttt-------ttcattcattgagatgatcatat-atttttgtcctttattaaaatgctgcattatattaattgatatttggatgttgtaccaaccttgcaatcctaatcc-g-atcctactaagtcaccacatatcatctttttatatattgccaagttcagttt-cctagtattttgctgagga-tttttgcatttgtgttcaca----agagacattggtctatggt-tttctttttcat-atatttttctttggttttgatatgaaaataatactggctttatagaatgagtttggaagcattctt-----ttctacattctaacagagttttgtgaagaattagtgtca---atgctttaagccttcggtagaatttgtca-taaagtcatctgcgcctcagatttcctttgtgggttggaagatttttcagtgttaattt----cttttatttctcatagaaatattctgag---tttctatgttttgagtcatttttggaaatttgtgttgccggaaatttgttcattttgatcttaactgtctaaat-atttgttggcacatatgtgtt-----------------------------------------ctgtttttccttgtgattctttcggtttctataaggtaggtagtcatgtttacttttt--attctgattttggtaatttttgtcttt-- i cebCap1.NW_016107695v1 C 0 C 0 s dasNov3.JH569188 505050 823 + 760995 -cctagttcctgaactta-ttgggaaaacgttcagcttttcaccattaagtatggtgctatctctgtatatttcatagattcactttatcagattgaggcaattccct-tctattcctagtttgctgaggatttataccatgaactagtggtgtatttttatcaaattc-ttttaa-------tgcatctgttgagttgattttgtgatttttgtcttttaataatattatttattccatttattcatttttatagattaaacaaaacttacagccctggggaaatatccttcttgctcatagggcatagtatttttatatgttgctaaatttggtttgtttgttgttttactgagga-tttttgtgtctatattcataagagggagatactgttctgtagt-ttgtccttttatgcga----tgtctgtttttggtatgaa------------tccatagaatgaattggaaactatttcttcctcctctattttctgtgagacttttgtgaagaattaatattatttcttcttcaaatgtttggtagaattcacaagtgaagccatgtgaacctctgctttcctttttg----ggaagatctcaaattattaattcaatttatttgtttatcatagatataatcaggt---tttccttttctt--cttgtttttgataatttgtgtctccagaa---tggtttcttttatataaa----ttatctaatttgctgacataaagttattattaaatagtaaataatttgttgacagaaagctattattcattgcttttccttaaaatcctt---atttttcta------gtagtcttgtcccccacttcatgtctgatattgataatttttctca--aa i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10924240 3001 - 12073884 I e aotNan1.NW_018494782v1 1459982 2287 - 1813869 I e canFam3.chr1 56141435 1862 + 122678785 I a score=6076633.000000 s hg38.chr6_KB021644v2_alt 36614 640 + 185823 tctt--tt-ttttcttgat-agtctagctaaagcttagccaatttttttgatctctttacagaacca----acttttggtttc---atttatttct--gtattgattt--ta---ttttctatttcattgatttattatctaatctttgttatttccttcattttgcttcccttgggcttacttgatacatcttttctagcttctgaaggtgaaaactcaggtgattttattgagatctttc-ttttttccaatagag-------------------------ccatttcaagctatacttctccaac-agccactacttttcctgcatcttataaaagcta-taatgt---ctttttattttcattgaattcaaaatt----ctacctttcattgagatttcttccttgaaataatattagagtatattgtttgtatttgcgtattttctgaatttcttcctgctgttgatttttaatttaatttctctgtggttgaagaacattttttacatgacaattaattttatattgattgaggcttgttttagaacttaatatgtggtctattctggaCCTAAAGATAGATAGTGTTTGAACAAAGGTCAGTTCACCAGGAACTTGTCATAATCCAAATACGTTATATCCTCTGATCTGTTCGGCTCAGAACTGTTTATCAACAAATGCACCGCGT s panTro5.chr6 173503017 643 + 175400573 tctt--tt-ttttcttgattagtctagctaaagcttacccaatttttt-gatctctttacagaacca----acttttggtttc---atttatttct--gtattgattt--ta---ttttctatttcattgatttattatctaatctttgttatttccttcattttgcttcccttgggtttacttgatatgtcttttctagcttctgaaggtgaaaactcaggtgattttattgagatctttc-ttttttccaatagag-------------------------ccatttcaagctatacttttccaac-agccactacttttcctgcatcttataaaagcta-taatgttgtctttttattttcattgaattcaaaatt----ctacctttcattgagatttcttccttgaaataatattagagtatattgtttgtatttgcgtattttctgaatttcttcctgctattgatttttaatttaatttctctggggttgaagaacattttttacatgacaattaattttatattgattgaggcttgttttagaacttaatatatggtctattctggaCCTAAAGATAGATAGTGTTTGAACAAAGGTCAGTTCACCAGGAACTTGTCATAATCCAAGTACGTTATATCCTATGATCTGTTAGGCTCAGAACTGTTTCTCAACAAATGCACTGCGT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171753378 643 + 173848474 tctt--tt-ttttcttgat-agtctagctaaagcttacccaatttttttgatctctttacagaacca----acttttggtttc---atttatttct--gtattgattt--ta---ttttctatttcattgatttattatctaatctttgttatttccttcattttgcttcccttgggtttacttgatacgtcttttctagcttctgaaggtgaaaactcaggtgattttattgagatctttc-ttttttccaatagag-------------------------ccatttcaagctatacttttccaac-agccactacttttcctgcatcttataaaagcta-taatgttgtctttttattttcattgagttcaaaatt----ctacctttcattgagatttcttccttgaaataatattagagtatattgtttgtatttgcgtattttctgaatttcttcctgctattgatttttaatttaatttctctggggttgaagaacattttttacatgacaattaattttatgttgattgaggcttgttttagaacttaatatatggtctattctggaCCTAAAGATAGATAGTGTTTGAACAAAGGTCAGTTCACCAGGAATTTGTCATAATCCAAGTACGTTATATCCTGTGATCTGTTAGGCTCAGAACTGTTTCTCAACAAATGCACTGCGT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11439785 639 - 12463322 tctt--tt-ttttcttgattagtctagctaaagcttagccaatttttttgatctctttacagaacca----acttttggtttc---atttatttct--gtattgattt--ta---ttttctatttcattgatttattatctaatctttgttatttccttcattttgcttcccttgggtttacttgatacatcttttctagcttctgaaggtgaaaacgcaggtgattttattgagatctttc-ttttttccaatagag-------------------------ccatttcaagctatagttttccaa--agtagtgacttttcctgcatcttataaaatcta-taatgt---ctttttattttcattgaattcaaaatt----ctacctttcattgagatttcttccttgaaataatattagagtgtattgtttgtatttgtgtattttctgaatttcttcctgctattgatttttaatttaatttctctgtggttgaagaacatttttta-atgacaattaattttatattgattgaggcttgttttagaagttaatatatggtctattctggaCCTAAAGATAGATAGTGTTTGAACAAAGGTCAGTTCACCAGGAACTTGTCATAATCCAAATACGTTATATCCTATGATCTGTTAGGCTCAGAACTGTTTCTCAACAAATGCACTGCAT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156259914 644 + 157873769 tctt--tt-ttttcttgactggtctagctaaagcttagccaattttgttgatctctttacagaacca----acttttggtttc---atttatttct--gtattgattt--ta---ttttctatttcattgatttattatctaatctttgttatttccttcattttgcttcccttgggtttactttatacatcttttctagcttctgaaggtgaaaactcgggtgactttattgagatctttc-ttttttccagtagag-------------------------ccatttcaagctatacttttccaaa-agccagtacttttcctgcatcttataagagcta-taatgttgtctttttgttttcattgaattcaaaatg----ccacctttcattgagatttcttccttgaaataatattagagtatattgtttatatttgtgtgttttctgaatttcttcctgctattgatttttaatttaatttctctgtggttgaagaccattttttatatgacaattaattttatattgattgaggcttgttttagaacttaatatatggtctattctggaCCTAAAGATAGATAGTGTTTGAACAAAGGTCAGTTCACCAGGAACTTTTCATAATCCAAATACGTTATACCCTATGATCTGTTAGGCTCCGAACTGTTTCTCAAGAAATGCACTGTGT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170291773 665 + 172585720 --tt--ta-ttttcttgactagtctggctaaagctttgccaattttgttgatctctttacagaacca----gcttttggtttc---attcatttct--gtaatgattt--tc---ttttctatttcattgatttattttctaatctttgttatttccttcattttgcttcccttgggtttactttatacatcttttttagcttctgaaggtgaaaactcaggtgattttattgagatctttc-tttcttccaatacaatacagatctttcttttttcttttttccatttcaagctatacttttccaac-agccactacttttcctgcatcttataaaagtta-taatgttgtctttttattttcattgaattcaaaatg----ctaattttcgttgagatttcttccttgaaataatattagagtgtattgtttgtatttgtgtattttctgaatttcttcctgctattgattcttaatttaatttctctgtggttgaagaaca-tttttatgtgacaattaattttatattgattgaggcttg-tttagaacttaatatattgtctattctggaCCTAAAGATAGATAGTGTTTGAGCAAAGGTCAGTTCACCAGGAATTTGTCATAATTCAAATACGTTATACCCTATGATCTGTTAGGCTCAGAATCGTTTCTCAATGAACGGGCTGCGT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169037375 665 - 170955103 --tt--ta-ttttcttgactagtctggctaaagctttgccaattttgttgatctctttacagaacca----gcttttggtttc---attcatttct--gtaatgattt--tc---ttttctatttcattgatttattttctaatctttgttatttccttcattttgcttcccttgggtttactttatacatcttttttagcttctgaaggtgaaaactcaggtgattttattgagatctttc-tttcttccaatacaatacagatctttcttttttcttttttccatttcaagctatacttttccaac-agccactacttttcctgcatcttataaaagtta-taatgttgtctttttattttcattgaattcaaaatg----ctaattttcgttgagatttcttccttgaaataatattagagtgtattgtttgtatttgtgtattttctgaatttcttcctgctattgattcttaatttaatttctctgtggttgaagaaca-tttttatgtgacaattaattttatattgattgaggcttg-tttagaacttaatatattgtctattctggaCCTAAAGATAGATAGTGTTTGAACAAAGGTCAGTTCACCAGGAATTTGTCATAATTCAAATACGTTATACCCTATGATCTGTTAGGCTCAGAATCGTTTCTCAATGAACGGGCTGCGT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8324622 665 + 10161646 --tt--ta-ttttcttgactagtctggctaaagctttgccaattttgttgatctctttacagaacca----gcttttggtttc---attcatttct--gtaatgattt--tc---ttttctatttcattgatttattttctaatctttgttatttccttcattttgcttcccttgggtttactttatacatcttttttagcttctgaaggtgaaaactcaggtgattttattgagatctttc-tttcttccaatacaatacagatctttcttttttcttttttccatttcaagctatacttttccaac-agccactacttttcctgcatcttataaaagtta-taatgttgtctttttattttcattgaattcaaaatg----ctaattttcgttgagatttcttccttgaaataatattagagtgtattgtttgtatttgtgtattttctgaatttcttcctgctattgattcttaatttaatttctctgtggttgaagaaca-tttttatgtgacaattaattttatattgattgaggcttg-tttagaacttaatatattgtctattctggaCCTAAAGATAGATAGTGTTTGAACAAAAGTCAGTTCACCAGGAATTTGTCATAATTCAAATATGTTATACCCTATGATCTGTTAGGCTCAGAATCGTTTCTCAATGAACGGGCTGCGT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1354171 666 + 3144229 --tt--tt-ttttcttgactagcctggctaaagctttgccaattttgttgatctctttacagaacca----gcttttggtttc---attcatttct--gtaatgattt--tc---ttttctatttcattgatttattttctaatctttgttatttccttcattttgcttcccttgggtttactttatacatcttttttagcttctgaaggtgaagactcaggtgattttattgagatctttctttttttccaatacaatacagatctttcttttttcttttttccatttcaagctatacttttccaac-agccactacttttcctgcatcttataaaagtta-taatgttgtctttttattttcattgaattcaaaatg----ctaattttcgttgagatttcttccttgaaataatattagagtgtattgtttgtatttgtgtattttctgaatttcttcctgctattgatttttaatttaatttctctgtggttgaagaaca-tttttatgtgacaattaattttatattaattgaggcttg-tttagaacttaatatattgtctattctggaCCTAAAGATAGATAGTGTTTGAACAAAGGTCAGTTCACCAGGAATTTGTCATAATTCAAATACGTTATACCCTATGATCTGTTAGGCTCAGAATCGTTTCTCAATGAACGGACTGCGT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96633484 664 + 98384682 --tt--tt-ttttcttgactagtctggctaaagctttgccaattttgttgatctctttacagaacca----gcttttggtttc---attcatttct--gtaatgattt--tc---ttttctatttcattgatttattttctaatctttgttatttccttcattttgcttcccttgggtttactttatacatcttttttagcttctgaaggtgaaaactcaggtgattttattgagatctttc-ttttttccaatacaatacagatctttattttttcttttttccatttcaagttatacttttccaac-agccactacttttcctgcatcttataaaagtta-tagtgttgtctttttattttcattgaattc-aaatg----ctaattttcattgagatttcttccttgaaataatattagagtgtattgtttatatttgcgtattttctgaatttcttcctactattgatttttaatttaatttctatgtggttgaagaaca-ttcttatgtgacaattaattttatattaattgaggcttg-tttagaacttaatatattgtttattatggaCCTAAAGATAGATAGTGTTTGAACAAAGGTCAGTTCACCAGAAATTTGTCGTAATTCAAATACGTTATACCCTATAATCTGTTAGGCTCAGAATCGTTTCTCAATGAACGGGCTGCGT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8177827 666 - 10857215 --tt--tt-ttttcttgactagcctggctaaagctttgccaattttgttgatctctttacagaacca----gcttttggtttc---attcatttct--gtaatgattt--tc---ttttctatttcattgatttattttctaatctttgttatttccttcattttgcttccgttgggtttactttatacatcttttttagcttctgaaggtgaaaactcaggtgattttattgagatctttctttttttccaatacaatacagatctttcttttttcttttttccatttcaagctatacttttccaac-agccactacttttcctgcatcttataaaagtta-taatgttgtctttttattttcattgaattcaaaatg----ctaatttttgttgagatttcttccttgaaataatattagagtgtattgtttgtatttgtgtattttctgaatttcttcctgctatttacttttaatttaatttctctgtggttgaagaaca-tttttatgtgacaattaattttatattaattgaggcttg-tttagaacttaacatattgtctattctggaCCTAAAGATAGATAGTGTTTGAACAAAGGTCAGTTCACCAGGAATTTGTCATAATTCAAATACGTTATACCCTATGATCTGTTAGGCTCAGAATTGTTTCTCAATGAACGGGCTGCGT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15571833 665 - 23502949 --tt--tt-ttttcttgactcatctggctaaaactttgccaattttgttgatttctttacagaacca----acttttggtttc---agtcatttct--gtaatgattt--tc---ttttctatttcattgatttgttttctaatctttgttatttccttcattttgcttcccttgggtttactttatacatgttttttagcttctgaaggtgaaaactcaggtgattttattgagatctttc-ttttttccaatacaatacagatgtttcttttttcttttttccatttcaagctatacttttccaac-aaccactacttttcctgcatcttctgagagtta-taatgttgtttttttattttcattgaattcaaaatg----ctaattttcattgagatttcttccttgaaataatattagagtgtagtgtttgtatttgtgtattttctgaatttcttcctgctattgatttttaatttaatttctctgtggttaaagaaca-tttttatgtgacaattaattttatattaattgaggcttg-tttagaacttaatatattgtctattctggaCCTAAAGATAGATAGTGTTTGAACAAAGGTCAGTTCACCAGGAATTTCTTGTAATTCAAATGCATTATACCTTATGATCTGTTAGGCTCAGAATTGTTTCTCAACGAATGGGCTGCGT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169836550 636 + 171630274 ------ct-ttttcttgactagtctaggtaaagctttgccaattttgttgatacgtttactgaactg------ttttggtttc---actgatttct--gtattgattttctc---ttttctatttcattgatttattatctaatctttgttattttcttcattttgttttccttgggtttactttgtatgtcttttctagcttctgaaggtgaaaactgaggagattgtattgagatctttc-tttttgccaatagag-------------------------tcattgcaggctacacctttctaat-agccaccacgtttcctgcatcttataaatgcta-taacgctgtctttttattttcatcgagttcaaagta----ctcactttcattgagatttcttccttgaaacaatgttagagtgaattgtttatatttgtgtattttctgaa----tttctgctactgatgtttcatttaatttctctgtggttgaagaatgttttttgcgtgacaattaatttcatattgattgaggcttgttttagaacttgatatatggtctattctggaTCTAAAGATACATAGTGTTTGAACAAAGGTCAGTTCACCAGGAATTTGTGGTAATCTGAATACCTTGTACCCTATGATCTGTTAGGCTCAGAACCTTTTCTCAACGAATGCAGTGCGC i calJac3.chr4 C 0 I 575 s saiBol1.JH378287 1256513 637 - 2905041 ------tt-ttttcttga-----ctaagtaaaactttgccaattttgttgatatctttactggacca----acttttggtttc---attgatttct--gtattgattttctc---ttttctgtttcattgatttattatctaatctttgttactttcttcattttgttttgcttgggcttactttgtatgtattttctagcttctgaaggtgaaaactgaggagattgtattgagatctttc-tttttgccaatagag-------------------------tcattttaggctatacctttccaac-agccattacttttcttgcatcttataaatgcta-taacactgtctttttattttcattgagtccaaagtg----ctcactttcattgagatttcttccttgaaacaatgttagagtgaattgtttatatttgtgtattttctgaatttctttctgctactgatttttcatttaatttctctgtggttgaagaatgttttttacgtgacaattaatttcatattgattgaggcttgttttacaacttaatatacagtctattctggaTCTAAAGATAGATAGTGTCTGAACAAAGGTCAGTTCACCAGGAATGCGTGGTAATCTAAATACGTTATACCCTGTGGTCGGTTAGGCTCAGAACTGTTTCTCAACGAACGCACTGTGT i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1212729 643 - 2164891 ------ttcttttcttgactagtctaggtaaacctttgccaattttgttgatatctttactgaaccaaagtaagtttggtttc---attgatttct--gtattgattttctc---ttctttatttcattgatttattatctaatctttgtaactttcttcattttgttttccgtggatttactttgtgtgtcttttctagcttctgaaggtgaaaactgaggagattgtattgagatctttc-tttttgccaattgag-------------------------tcatttcaggctatacctttccaac-agccactacttttcctgcatcttataaatgcta-taatgctgtctttttattttcattgagttaaaagtg----gtaactttcattgagatttcttccttgaaacaatgttagaatgaattgtttatatttgtgtattttctgaatttctttctgctactgatttttcatttaatttctctgtggttgaagaatgttttttacgtgac----aatttcatattgattgaggcttgttttagaacttaatatatggtctattctggaTCTAAAGATAGATAGTGTTTGAACAAAGGTCAGTTCACCAGAAATTTGTGGTAATCCAAATATGTTATACACTATGATCTGTTAGGCTCAGAACTGTTTCTCGACGAATGTACTGCGT i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1462269 647 - 1813869 --tctttt-ttttcttgactagtctaggtaaagctttgccaattttgttgatatctttactgaacca----gcttttggtttc---attgatttct--gtatcgattttctc---ttttctgtttcattgatttattatctaatctttgttactttcttcattttgttttccttgggtttactttgtatgtctttcctggcttctgaaggtgaaaactgaggagattgtgttgagatctttc-tttttgccaatagag-------------------------tcatttcaggcgatgtctttccagc-agccactgtgtttcctgcagcttataaatgctattaactctgtctttttattttcatcgagttcaaagtg----ctaactttcattgagatttcttccttgaaacaatgttagagtccattgtttatatttgtgcattttccgaatttctttctgctactgatttttcatttaatttctctgtggttgaagaatgttttttacgtgatgattaatttcatattgattgaggcttgttttagaacttaatatatggtctattctggaTCTCAAGATAGATAGTGTTTGAACAAAGGTCAGTTCACCAGGAATTTGTGGTCATCCACAGACGTTATACCCTATGATCTGTTAGGCTCAGAACTGTTTCTCAGCGAACGCACTGCGT i aotNan1.NW_018494782v1 I 2287 C 0 s dasNov3.JH569188 505873 475 + 760995 cttt--tt-tttcctggatccatctagctaaacgtttgtcaatgttgttgattgtttcatagaacca----gcttttggtttcattattgatttttaaaaattgtttt--tctgtttttttatttcattggtttattcctcaatc-----------cttta-tttgattttcttgagtttactttggacttcttttctagattgttaaagtggaagcataggtgattgagttgaaatttttc-ttccttctaatatag-------------------------ctgtttaatgttacacttttctgtcaaataattactttagctacatttcataaattttg-taatg----catttttgtttcactgaattcaaaatactttctaattttccttgatgtttcatctttgaAGaaat------------------tatttttaaaattttcaaa--tatttatgtttct--ttttttatttatttttaCTATGGTCC--------ttttt-----------------------------------tttaaaa---------------------------aaaataaataG-----------------------------------ATCACACAAA-ACGTTATG--CTAatatttgt------------------------------------ i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10924240 3001 - 12073884 I e canFam3.chr1 56141435 1862 + 122678785 I a score=1278520.000000 s hg38.chr6_KB021644v2_alt 37254 138 + 185823 CCCTGCCCTCGGGTCCTGTCTGTGCACAGTGCGCCCAGAGTTCCTTCTCTTTTTATCCGCCCATTACCTTCCCATTCAGTTGTTGTTATTCTTTACCATTTAGACGGCATGTGTGCATGTGTGTGTATCTTTTCTCCA s panTro5.chr6 173503660 137 + 175400573 CCCTGCCCTCAGGTCCTGTCTGTGCACAGTGCGCCCAGAGTTCCTTCTCTTTTTATCTGCCCATTAC-TTCCCATTCGGTTGTTGTTATTCTTTACCATTTAGACGGCATGTGTGCATGTGTGTGTATCTTTTCTCCA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171754021 138 + 173848474 CCCTGCCCTCGGGTCCTGTCTGTGCACAGTGCGCCCAGAGTTCCTTCTCTTTTTATCCGCCCATTACCTTCCCATTCGGTTGTTGTTATTCTTTACCATTTAGACGGCATGTGTGCATGTGTGTGTATCTTTTCTCCA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11440424 138 - 12463322 CCCTGCCCTCGGGTCCTGTCTGTGCACAGTGCACCCAGAGTTCCTTCTCTTTTTATCTGCCCATTACCTTCCCGTTTGGTTGTTGTTATTCTTTACCATTTAGACGGCATGGGTGCATGTGTGTGTATCTTTTCTCCA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156260558 138 + 157873769 CCCTGCCCTCGGGTCCTGTCTGTGCACAGTGCGCCCAGAGTTCCTTCTCTTTTTATCTGCCCATTACCTTCCCATTCAGTTGTTGTTATTCTTTACCATTTAGATGGCATGTGTGCATGTGTGTGTATCTTTTCTCCA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170292438 138 + 172585720 CCCTGACCTCGGGTCCTGTGTGTGCACAGTGTGCCCAGAGTTCCTTCTCTGTTTATCTGCCCATTACCTTCCCATTCAGTTGTTATTATTCTTTACTATTTAGATGGCATATGTGCATGTGTGTGTACTTTTTCTCCA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169038040 138 - 170955103 CCCTGACCTCGGGTCCTGTGTGTGCACAGTGTGCCCAGAGTTCCTTCTCTGTTTATCTGCCCATTACCTTCCCATTCAGTTGTTATTATTCTTTACCATTTAGATGGCACATGTGCATGTGTGTGTACCTTTTCTCCA i macFas5.chr4 C 0 I 414 s macNem1.NW_012011000v1 8325287 138 + 10161646 CCCTGACCTCGGGTCCTGTGTGTGCACAGTGTGCCCAGAGTTCCTTCTCTGTTTATCTGCCCATTACCTTCCCATTCAGTTGTTATTATTCTTTACCATTTAGATGGCATATGTGCATGTGTGTGTACCTTTTCTCCG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1354837 138 + 3144229 CCCTGCCCTCGGGTCCTGTGTGTGCACAGTGCGCCCAGAGTTCCTTCTCTGTTTATCTGCCCCTTACCTTCCCATTCAGTTGTTATTATTCTTTACCATTTAGATGGCATATGTGCATGTGTGTGTACCTTTTCTCTG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96634148 138 + 98384682 CCCTGCCCTCGGGTCCTGTGTGTGCACAGTGTGCCCAGAGTTCCTTCTCTGTTTATCTGCCCATTACCTTCCCATTCACTTGTTATTATTCTTTACCATTTAGATGGCATATGTGCATGTGTGTGTACCTTTTCTCCG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8178493 138 - 10857215 CCCTGCCCTCGAGTCCTGTGTGTGCACAGTGCGCCCAGAGTTCCTTCTCTGTTTATCTGCCCATTACCTTCCCATTCAGTTGTTATTATTCTTTACCATTTAGATGGCATATGTGCATGTGTGTGTACCTTTTCTCTG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15572498 138 - 23502949 CCCTGTCCTCAGGTCCTGTCTGTGCACAGTGCACCCAGAGTTCCTTCTCTGTTTATCTGCCCATTACCTTCCCATTCAGTTGTTATTATTCTTTACCATTTAGATGGCATATGTGCATGTGTGTGTATCTTTTCTCCA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169837761 134 + 171630274 CCCCGCCCTCAGGTCCCGTCTACGTGCAGTGCGTCCAGAATTCCT--TCTGTTTATCTGCCCATTACCTTCCCACTCAGTTGTTACTGTCCTTTACCG-TTAAATGGCATATGCACACGTGTGTGTATC-TTTCTCCA i calJac3.chr4 I 575 C 0 s saiBol1.JH378287 1257150 137 - 2905041 CCCTGCCCTCAGGTCCTGTCTGCGTGCAGTGCGTCCAGCGTTCCTTCTCTGTTTATCTGCCCGTTACCTTCCCATTCAGTTGTTACTGTTCTTTACTG-TTAAATGGCACATGCATGCGTGTGTGTATCTTTTCTCCA i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1213372 137 - 2164891 CCCTGCCCTCAGGTCCTGTCTGTGTGCAGTGCGTCCACCGTTCCTTCTCTGTTTATCTGCCCATTACCTTCCCATTCAGTTGTTACTGCTCTTTACTG-TTAAATGGCATATGCACGCGTGTGTGTATCTTTTCTCGA i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1462916 137 - 1813869 CCCTGCCCTCAGGTCCTGTCTGCGTGCAGTGCGTCCAGAGTTCCTTCTCTGTTTATCTGCCCATTACCTTCCCATTCAGTTGTTACTGTTCTTTACCG-TTAAATGGCATATGCATGCGTGTGTGTATCTTATCTCCA i aotNan1.NW_018494782v1 C 0 C 0 s dasNov3.JH569188 506348 75 + 760995 ----------------------------gtgtttcttgagtttcttc-----------------------------------ctgttattgattgctaacttaattgcactgtggttggagaatatattttatgttta i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10924240 3001 - 12073884 I e canFam3.chr1 56141435 1862 + 122678785 I a score=328970.000000 s hg38.chr6_KB021644v2_alt 37392 40 + 185823 AAGGTGAGATAGTTCACTGTTAATAGTTCATTTGGATAGT s panTro5.chr6 173503797 40 + 175400573 AAGGTGAGATAGTTCACTGTTAATAGTTCATTTGGATAGT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171754159 40 + 173848474 AAGGTGAGATAGTTCACTGTTAATAGTTCATTTGGATAGT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11440562 40 - 12463322 AAGGTGAGATAGTTCACTGTTAATAGTTCATTTGGATAGT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156260696 40 + 157873769 AAGGTGAGATAGTTCACTGTTAACAGTACATTTGGATAGT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170292576 40 + 172585720 AAGGTGAGAGAGTTCACTGTTCATAGTTCATTTGGATAGT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169038592 40 - 170955103 AAGGTGAGAGAGTTCACTGTTCATAGTTCATTTGGATAGT i macFas5.chr4 I 414 C 0 s macNem1.NW_012011000v1 8325425 40 + 10161646 AAGGTGAGAGAGTTCACTGTTCATAGTTCATTTGGATAGT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1354975 40 + 3144229 AAGGTGAGAGAGTTCACTGTTCATAGTTCGTTTGGATAGT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96634286 40 + 98384682 AAGGTGAGATAGTTCACTGTTCATAGTTCATTTGGATAGT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8178631 40 - 10857215 AAGGTGAGAGAGTTCACTGTTCATAGTTCATTTGGATAGT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15572636 40 - 23502949 AAGGTGAGATAGTTCACTGTTCATAGTTCATTTGGATAGT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169837895 37 + 171630274 AAGGTGAACTCGTTCA---TTAATAGTTCATTTGGATAGT i calJac3.chr4 C 0 I 311 s saiBol1.JH378287 1257287 37 - 2905041 AAGGCGAACTCGTTCA---TTAATAGTGCATTTGGATGGT i saiBol1.JH378287 C 0 I 20 s cebCap1.NW_016107695v1 1213509 37 - 2164891 AAGGTGAACTCGTTCA---TTAATAGTTCATTTGGATAGT i cebCap1.NW_016107695v1 C 0 I 20 s aotNan1.NW_018494782v1 1463053 37 - 1813869 ACGGTGAACTCGCTCA---TTAATAGTTCATTTGGGTAGT i aotNan1.NW_018494782v1 C 0 C 0 s dasNov3.JH569188 506423 20 + 760995 ------------------aataatgttatatttatgta-- i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10924240 3001 - 12073884 I e canFam3.chr1 56141435 1862 + 122678785 I a score=40388.000000 s hg38.chr6_KB021644v2_alt 37432 5 + 185823 TACCT s panTro5.chr6 173503837 5 + 175400573 TACCT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171754199 5 + 173848474 TACCT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11440602 5 - 12463322 TACCT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156260736 5 + 157873769 TACGT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170292616 5 + 172585720 TACCT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169038632 5 - 170955103 TACCT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8325465 5 + 10161646 TACCT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1355015 5 + 3144229 TACCT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96634326 5 + 98384682 TACCT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8178671 5 - 10857215 TACCT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15572676 5 - 23502949 TACCT i colAng1.NW_012114488v1 C 0 C 0 s saiBol1.JH378287 1257344 5 - 2905041 TACTT i saiBol1.JH378287 I 20 I 7 s cebCap1.NW_016107695v1 1213566 5 - 2164891 TACTT i cebCap1.NW_016107695v1 I 20 I 7 s aotNan1.NW_018494782v1 1463090 5 - 1813869 TAACT i aotNan1.NW_018494782v1 C 0 I 41 e otoGar3.GL873575 10924240 3001 - 12073884 I e calJac3.chr4 169837932 311 + 171630274 I e dasNov3.JH569188 506443 0 + 760995 C e canFam3.chr1 56141435 1862 + 122678785 I a score=8281.000000 s hg38.chr6_KB021644v2_alt 37437 1 + 185823 T s panTro5.chr6 173503842 1 + 175400573 T i panTro5.chr6 C 0 C 0 s panPan2.chr6 171754204 1 + 173848474 T i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11440607 1 - 12463322 T i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156260741 1 + 157873769 T i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170292621 1 + 172585720 T i rheMac8.chr4 C 0 I 319 s macFas5.chr4 169038637 1 - 170955103 T i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8325470 1 + 10161646 T i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1355020 1 + 3144229 T i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96634331 1 + 98384682 T i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8178676 1 - 10857215 T i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15572681 1 - 23502949 T i colAng1.NW_012114488v1 C 0 C 0 s saiBol1.JH378287 1257356 1 - 2905041 T i saiBol1.JH378287 I 7 C 0 s cebCap1.NW_016107695v1 1213578 1 - 2164891 T i cebCap1.NW_016107695v1 I 7 C 0 e otoGar3.GL873575 10924240 3001 - 12073884 I e aotNan1.NW_018494782v1 1463095 41 - 1813869 I e calJac3.chr4 169837932 311 + 171630274 I e dasNov3.JH569188 506443 0 + 760995 C e canFam3.chr1 56141435 1862 + 122678785 I a score=38367.000000 s hg38.chr6_KB021644v2_alt 37438 5 + 185823 AAGAA s panTro5.chr6 173503843 5 + 175400573 AAGAA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171754205 5 + 173848474 AAGAA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11440608 5 - 12463322 AAGAA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156260742 5 + 157873769 AAGAA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170292941 5 + 172585720 aagaa i rheMac8.chr4 I 319 C 0 s macFas5.chr4 169038638 5 - 170955103 AAGAA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8325471 5 + 10161646 AAGAA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1355021 5 + 3144229 AAGAA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96634332 5 + 98384682 AAGAA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8178677 5 - 10857215 AAGAA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15572682 5 - 23502949 AAGAA i colAng1.NW_012114488v1 C 0 C 0 s saiBol1.JH378287 1257357 5 - 2905041 AATAA i saiBol1.JH378287 C 0 I 4 s cebCap1.NW_016107695v1 1213579 5 - 2164891 AATAA i cebCap1.NW_016107695v1 C 0 I 4 s dasNov3.JH569188 506443 2 + 760995 ---aa i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10924240 3001 - 12073884 I e aotNan1.NW_018494782v1 1463095 41 - 1813869 I e calJac3.chr4 169837932 311 + 171630274 I e canFam3.chr1 56141435 1862 + 122678785 I a score=103194.000000 s hg38.chr6_KB021644v2_alt 37443 14 + 185823 TTTGGGACTCAAAG s panTro5.chr6 173503848 14 + 175400573 TTTGGGACTCAAAG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171754210 14 + 173848474 TTTGGGACTCAAAG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11440613 14 - 12463322 TTTGAGACTCAAAG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156260747 14 + 157873769 TTTGAGACTCAAAA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170292946 14 + 172585720 TTTGAGACTCAAAG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169038643 14 - 170955103 TTTGAGACTCAAAG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8325476 14 + 10161646 TTTGAGACTCAAAG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1355026 14 + 3144229 TTTGAGACTCAAAG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96634337 14 + 98384682 TTTGAGACTCAAAG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8178682 14 - 10857215 TTTGAGACTCAAAG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15572687 14 - 23502949 TTTGAGACTCAAAG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169838243 14 + 171630274 TTAGAGACTCTAAG i calJac3.chr4 I 311 C 0 s saiBol1.JH378287 1257366 14 - 2905041 TTAGAGACTCTAAG i saiBol1.JH378287 I 4 C 0 s cebCap1.NW_016107695v1 1213588 14 - 2164891 TTAGAGACATTAAG i cebCap1.NW_016107695v1 I 4 C 0 s dasNov3.JH569188 506445 5 + 760995 -------cttat-- i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10924240 3001 - 12073884 I e aotNan1.NW_018494782v1 1463095 41 - 1813869 I e canFam3.chr1 56141435 1862 + 122678785 I a score=5430788.000000 s hg38.chr6_KB021644v2_alt 37457 578 + 185823 TTAATACTTTGATTTACAGGTCTGTGTATTTCAATAACTGTAAGACAGTGTATAAATAAACACAAAGACACACATACACACTAAGGGAAAGTACACTGGGACATTTATTCCAGGAAGACAACCTCACCAGAGTTCAGTCCACTGACATCTGGCAGCTCCTCTTTGGGGGTTCTGTTACTGAAAGAGGAAGGGGTTAGTTCTCAAGTAAACTCACCCCTAACCTGACTCAAAATCAGTACTCTGGAGGCTAGAAGTATAGCAAGGGGCCAGCCTAACAGGTCAGCAATTTCTACAGCAAGAA---AGAGTAAAACATTGGCCACATTACGTAGTGATGTT----AAAGCCAACGATATGAAATATATTATAGGAAAAGCAATATGTTATAATTTCTGAACCGAGGATGAAAATATTTCCTCGCATTTAAGCATATTCCC-AGCATCCCTGGAGAT-----A---TAAAAAGCACGATTTGCACAAAATGTGGTATGTGAAATATTTTAACAATTG-TAAGTCCATAAACAGAAATAATTGTTCGCATTTTGAATAATAAAGTAATGAACGGCTTCCAGTTGAAGGGCTACGGCCGT s panTro5.chr6 173503862 578 + 175400573 TTAATACTTTGATTTACAGGTCTGTGTATTTCAATAACTGTAAGACAGTGTATAAATAAACACAAAGACACACATACACACTAAGGGAAAGTACACTGGGACATTTATTCCAGGAAGACAACCTCACCAGAGTTCAGTCCACTGACATCTGGCAGCTCCTCTTTGGGGGTTCTGTTACTGAAAGAGGAAGGGGTTAGTTCTCAAGTAAACTCACCCCTAACCTGACTCAAAATCAGTACTCTGGAGGCTAGAAGTATAGCAAGGGGCCAGCCTAACAGGTCAGCAATTTCTACAGCAAGAA---AGAGTAAAACATTGGCCACATTACGTAGTGATGTT----AAAGCCAACGATATGAAATATATTATAGGAAAAGCAATATGTTATAATTTCTGAACCGAGGATGAAAATATTTCCTTGCATTTAAGCATATTCCC-AGCATCCCTGGAGAT-----A---TAAAAAGCACGATTTGCACAAAATGTGGTATGTGAAATATTTTAACAATTG-TAAGTCCATAAACAGAAATAATTGTTCGCATTTTTAATAATAAAGTAACGAACGGCTTCCAGTTGAAGGGCTGTGGCCGT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171754224 578 + 173848474 TTAATACTTTGGTTTACAGGTCTGTGTATTTCAATAACTGTAAGACAGTGTATAAATAAACACAAAGACACACATACACACTAAGGGAAAGTACACTGGGACATTTATTTCAGGAAGACAACCTCACCAGAGTTCAGTCCACTGACATCTGGCAGCTCCTCTTTGGGGGTTCTGTTAGTGAAAGAGGAAGGGGTTAGTTCTCAAGTACACTCACCCCTAACCTGACTCAAAATCAGTACTCTGGAGGCTAGAAGTATAGCAAGGGGCCAGCCTAACAGGTCAGCAATTTCTACAGCAAGAA---AGAGTAAAACATTGGCCACATTACGTAGTGATGTT----AAAGCCAACGATATGAAATATATTATAGGAAAAGCAATATGTTATAATTTCTGAACCGAGGATGAAAATATTTCCTTGCATTTAAGCATATTCCC-AGCATCCCTGGAGAT-----A---TAAAAAGCACGATTTGCACAAAATGTGGTATGTGAAATATTTTAACAATTG-TAAGTCCATAAACAGAAATAATTGTTCACATTTTGAATAATAAAGTAACGAACGGCTTCCAGTTGAAGGGCTGTGGCCGT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11440627 573 - 12463322 TTAATACTTTGATTTACAGGTCTGTGTATTTCAATAACTGTAAGACAGTGTATAAATAAACACAAAGACACACATACACACTAAGGGAAAGTACACTGGGACATTTATTCCAGGAAGACAACCTCACCAGAGTTCAGTCCACTGACATCTGGCAGCTCCTCTTTGGGGGTTCTGTTAGTGAAAGAGGAAGGGGTTAGTTCTCAAGTAAACTCACCCCTAACCTGACTCAAAATCAGTACTCTGGAGGCTAGAAGTATAGCAAGGGGCCAGCCTAACAGGTCAGCAATTTCTACAGCAAGAA---AGAGTAACGCATTGGCCACATTGCGTAGTGATGTT----AAAGCCAACGATATGAAA-----TATAGGAAAAGCAATATGTTATAATTTCTGAACTGAGGATGAAAATATTTCCTCGCATTTAAGCATATTCCC-AGCATCCCTGGAGAT-----A---TAAAAAGCACGATTTGCACAAAATGTGTTATGTGAAATATCTTAACAATTG-TAAGTCCATAAACAGAAATAATTGTTCGCATTTTGAATAATAAAGTAATGAACGGCTTCCAGTTGAAGGGCTGTGGCCGT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156260761 577 + 157873769 TTAATACTTTGGTTTACAGGTCTGTGTATTTCAATAACTGTAAGAGA-TGTATAAATAAACACAAAGACACACATACACACCAAGGGAAAGTACACAGGGACATTTATTCCAGGAAGACAACCTCACCAGAGTTCAGTCCACTGACATCTGGCAGCTCCTCTTTGGGGGTTCTGTTAGTGGAAGAGGAAGGGGTTAGTTATCAAGTAAACTCACCTCTAACCTGACCCAGAATCACGACTCTGGAGGCTAAAAGTGTAGCGAGGGGCCAGCCTAACAGGTCAGCAATTTCTACAGCAAGAA---AGAGTAAAACATTGGCCGCATTATGTAGTGATGTT----AAAGCCAATGATACGAAATACATTATAGGAAAAGCAATATGTTATAATTTCTGAACCGAGGATGAAAACATTTCCTTGCATTTAAGCATATTCCC-AGCATCCTTGGAGAT-----A---TAAAAAGCACGATTTGCACAAAATGTGGTGTGTGAAATATTTTAACAATTG-TAAGTCCATAAACAGAAATAATTGTTCACATTTTGAATAATAAGGTAACGAACGGCTTCCAATTGAAGGGCTGTGGCCAT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170292960 582 + 172585720 TTAATACTTGGATTTACAGGTCTGTGTATTTCAATAACTGTAGGAGAGTGTATAAATAAACTCAAAGACTCATGTACACACTAAGGGAAAGTACTCTGGGACATTTATTCCAGGAAGACAACCTCACCAGAGTTCAGTTCACTGACATCTGGCAGCTCCTGTCCAGGGATTCTGTTAGTGGAAGAGGAAGGGGTTAGTTATCAAGTAAACTCACCTCTAACCTGACCCCAAATCAGGACTCTGGAGGCTGGAAGTGTAGTGAGGGGCCAGCCTAACAGGTCAGCAGTTTCTACAGCAAGAA---GGAGTAAAACATTGGACACATTATGTAGTGATGTT----GAAACCAACAATACGAAATACATTCTAGGAAAAGCAAGATGCTAAAACTCCTGAACTGACGATGAAAATATTTCCTTGTATTTAAGCATATTCCC-AGCATCCTTGGAGAT-----AAACAAAAAAGCATGATTTGCACAAAATGTGGTGTGTGAAATATTTTAACAATTGTTAAGTCCATAAACAGAAATAATTGTTTGCATTGTGAATAATAAAGTAACGAACGGCTTCCAGTTGAAGGGCTGTGACCGT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169038657 582 - 170955103 TTAATACTTGGATTTACAGGTCTGTGTATTTCAATAACTGTAGGAGAGTGTATAAATAAACTCAAAGACTCATGTACACACTAAGGGAAAGTACTCTGGGACATTTATTCCAGGAAGACAACCTCACCAGAGTTCAGTTCACTGACATCTGGCAGCTCCTGTCCAGGGATTCTGTTAGTGGAAGAGGAAGGGGTTAGTTATCAAGTAAACTCACCTCTAACCTGACCCCAAATCAGGACTCTGGAGGCTGGAAGTGTAGTGAGGGGCCAGCCTAACAGGTCAGCAGTTTCTACAGCAAGAA---GGAGTAAAACATTGGCCACATTATGTAGTGATGTT----GAAACCAACAATACGAAATACATTCTAGGAAAAGCAAGATGCTAAAACTCCTGAACTGACGATGAAAATATTTCCTTGTATTTAAGCATATTCCC-AGCATCCTTGGAGAT-----AAACAAAAAAGCATGATTTGCACAAAATGTGGTGTGTGAAATATTTTAACAATTGTTAAGTCCATAAACAGAAATAATTGTTTGCATTGTGAATAATAAAGTAACGAACGGCTTCCAGTTGAAGGGCTGTGACCGT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8325490 582 + 10161646 TTAATACTTGGATTTACAGGTCTGTGTATTTCAATAACTGTAGGAGAGTGTATAAATAAACTCAAAGACTCATGTACACACTAAGGGAAAGTACTCTGGGACATTTATTCCAGGAAGACAACCTCACCAGAGTTCAGTTCACTGACATCCGGCAGCTCCCGTCCAGGGATTCTGTTAGTGGAAGAGGAAGGGGTTAGTTATCAAGTAAACTCACCTCTAACCTGACCCCAAATCAGGACTCTGGAGGCTGGAAGTGTAGTGAGGGGCCAGCCTAACAGGTCAGCAGTTTCTACAGCAAGAA---GGAGTAAAACATTGGCCACATTATGTAGTGATGTT----GAAACCAACAATACGAAATACATTCTAGGAAAAGCAAGATGCTAAAACTCCTGAACTGACGATGAAAATATTTCCTTGTATTTAAGCATATTCCC-AGCATCCTTGGAGAT-----AAACAAAAAAGCATGATTTGCACAAAATGTGGTGTGTGAAATATTTTAACAATTGTTAAGTCCATAAACAGAAATAATTGTTTGCATTGTGAATAATAAAGTAACGAACGGCTTCCAGTTGAAGGGCTGTGACCGT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1355040 581 + 3144229 TTAATACTTGGATTTACAGGTCTGTGTATTTCAATAACTGTAGGAGAGTGTATAAATAAACACAAAGACTCATGTACACACTAAGGGAAAGTACACCGGGACATTTATTCCAGGAAGACAACCTCACCAGAGTTCAGTTCACTGACATCTGGCAGCTCCTCTCCAGGGATTCTTTTAGAGGAAGAGGAAGGGATTAGTTATCAAGTAGACTCACCTCTAACCTGACCCCAAATCAGGACTCTGGAGGCTGAAAGTGTAGTGAGGGGCCAGCCTAACAGGTCAGCAGTTTCTACAGCAAGAA---GGAGTAAAACATTGGCCACATTATGTAGTGATGTT----GAAACCAACAATACGAAATACATTCTAGGAAAAGCAAGATGCTAAAACTCCTGAACCGACGATGAAAATATTTCCTTGTATTTAAGCACATTCCC-AGCATCCTTGGAGAT-----AAACAAAAAAGCATGATTTGCACAAAATGTGGTGTGTGAAATATTTTAACAATTG-TAAGTCCATAAATAGAAATAATTGTTTGCATTGTGAATAATAAAGTAACGAACGGCTTCCAGTTGAAGGGCTGTGACCGT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96634351 583 + 98384682 TTAATACTTTGATTTACAGGTCTGTGTATTTCAATAACTGTAGGAGAGTGTATAAATAAACACAAAGACTCATGTACACACTAAGGGAAAGTACACTGGGACATTTATTCCGGGAAGACAACCTCACCAGAGTTCAGTTCACTGACATCGGGCAGCTCCTCTCCAGGGATTCTGTTAGTGGAAGAGGAAGGGGTTAGTTATCAAGTAGACTCACCTCTAACCTGACCCCAAATCAGGACTCTGGAGGCTGAAAGTGTAGTGCGGGGCCAGCCTAACAGGTCAGCAGTTTCTACAGCAAGAA---GGAGTAAAACATTGGCCACATTATGTAGTGATGTT----GAAACCAACGATACGAAATACATTCTAGGAAAAGCAAGATGCTAAAACTCCTGCACCCAGGATGAAAATATTTCCTTGTATTTAAGCATATTCCC-AGCATCCTTGGAGAT---AAAAAAAAAAAAGCATGATTTGCACAAAATGTGGCGTGTGAAATATTTTAACAATTG-TAAGTCCATAAACAGAAACAATTGTTTGCATTGTGAATAATAAAGTAATGAACGGCTTCCAGTTGAAGGGCTGTGACCGT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8178696 581 - 10857215 TTAATACTTTGATTTACAGGTCTGTGTATTTCAATAACTGTAGGAGAGTGTATAAATAAGCACAAAGACTCATGTACACACTAAGGGAAAGTACACCGGGACATTTATTCCAGGAAGACAACCTCACCAGAGTTCAGTTCACTGACATCTGGCAGCTCCTCTCCAGGGATTCTGTTAGTGGAAGAGGAAGGGGTTAGTTATCAAGTAAACTCACCTCTAACCTGACCCCAAATCAGGACTCTGGAGGCTGGAAGTGTAGTGAGGGGCCAGCCTAACAGGTCAGCAGTTTCTACAGCAAGAA---GGAGTAAAACATTGGCCACATTATGTAGTGATGTT----GAAACCAACAATACGAAATACATTCTAGGAAAAGCAAGATGCTAAAACTCCTGAACTGACGATGAAAATATTTCCTTGTATTTAAGCATATTCCC-AGCATCCTTGGAGAT-----AAACAAAAAAGCATGATTTGCACAAAATGTGGTGTGTGAAATATTTTAACAACTG-TAAGTCCATAAATAGAAATAATTGTTTGCATTGTGAATAATAAAGTAACGAACGGCTTCCAGTTGAAGGGCTGTGACCGT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15572701 586 - 23502949 TTAATACTTTGATTTACAGGTCTGTGTATTTCAATAACTGTAGGACAGTGTATAAATAAACACAAAGACTCATGTACACACTAAGGGAAAGTACACTGGGACATTTATTCCAGGAAGACAACCTCACCAGAGTTCAGTTCACTGACATCTGGCAGCTCCTCTCCAGGGGTTCTGTTAGTGGAAGAGGAAGGGGTTAGTTATCAAGTAAACTCACCTCTAACCTGACCCCAAATCAGGACTCTGGAGGCTGGAAGTGTAGTGAGGGGCCAGCCTAACAGGTCAGCAGTTTCTACAGCAAGAA---GGAGTAAAACATTGGCCACATTATGTAGTGATGTT----GGAACCAACGATACGAAATACATTCTAGGAAAAGCAAGATGCTATAACTCCTGAAGCGAGGATGAAAATATTTCCTTGTATTTAAGCAAATTCCC-AGCATCCTTGGAGATAAAAAAAAAAAAAAAGCATGATTTGCACAAAATGTGGTGTGTGAAATATTTTAACAATTG-TAAGTCCATAAACAGAAATAATTGTTTGCATTGTGAATAATAAAGTAACGAACGGCTTCCAGTTGAAGGGCTGTGACCAT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169838257 577 + 171630274 TTAATACTTTGATTTACAGGTCTGTGTATTTCAGTAACAGTAAGAGAATGTATAAATAAACACAGAGACACGCATACCCACAAAGGAAAAGTGCAGCGGAACATTTACTCCAGGAAGGCAGTGTCACCAGAGTTTAGTCCACCGACGTCTGGCAGCTCCTCTCCAGGGGTTCTGTTAGCAGAGGAGGAAGAGGTGAGTTATCAGGTAAACTCACCTCGAACCTGACCCAAAATCAGGACTCTGGAGACTCAAGGTGTTGTGAGGAGCCATTCTGAGGGGTCAGGAATTTCTACAGCAGGAA---AGAGTAAAGGATCAGCCACATGGCGTCATGATATT----AAAGCAAATGACATCAAGTGCGTTGTAGGAAAAGCCACCTGCTGTAATTCCTGAACGGACGGTGGCAATGTTCCCTTG-ATTTAAGCATATTCCC-AGCATTCTTGGAGAT-----A---TAAAAAGCATGGATTGCACAAAATGTGGCGTGTGAAATGTTTTAACAATTG-TAAGTCTCTCGACGGAGATAATTGCTAGCATCATGAATACGACGGTAAGGGACAGCTTCCAGTTGAAGGGCTGCGGGGGC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1257380 577 - 2905041 TTAATACTTTGATTTATAGGTCTGTGTATTTCAATAACAGTAAGAGAGTGTATAAATATACACAGACACACATATACCCACGAAAGGAAAGTACAGCAGAACATTTACTCCAGAAAGACAGTGTCATCAGAGTTCAGTCCACTTACATCTGGCAGCTCCTCTCCAGGGGTTCTGTTAGCGGAGGAGGAAGAGGTGAGTTATCAGGTAAACTCACCTCTAACCTGACCCAAAATCAGAACTCTGGAGACCCAAAGTGTTGTGGGGAGCCATTCTTAGGGGTCAGCAATTTCTACAGCAAGAA---AGAGTAAACGATTGGCCACATTATGTAGTGATATT----AAAGTAAATGACACGAAATGCATTATAGGAAAAGCAGTC-GCTGTAATTCCTGAACTGAGGATGACAGTATTCCCTTGCATTTAAGCATATTCCC-AGCATTCTTGGAGAT-----A---TAAAAAGCATGAATTGCATAAAATGTGGCGTGTGAAATGTTTTAACAATTG-TAAGTCCCTCCGTGGAGATAATTGCTAGCATCATGAACACGACAGTAAGGGATAGCTTCCAGCTGAAGGGCTGCAGCGGC i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1213602 578 - 2164891 TTAATACTTTGATTTACAGGTCTGTGTATTTCAATAACACTAAGAGAGCGTATAAATAAACACAGAGACACACATACCCACGAAGGAAAAGTACAGCGGAACATTTACTCCAGGAAGACAGTGTCACCAAAGTTCAGTCCACTTACATCTGGCAGCTCCTCTCCAGGGGTTCTGTTAGCGGAGGAGGAAGACGTGAGTTATCAGGTAAACTCACCTCGAACCTGACCCAAAAGCAGGACGCTGGAGACTCAAAGTGTTGTGAGGAGCCATTCTAAGGGGTCAGCAACTTCTACAGCAAGAA---AGAGTAAAAGATTGGCCACATTATGTAGTGACATT----AAAGTAAATGACACGAAATGCATTATAGGAAAAGCTATCTGCTATAATTCCTGAACTGAGGATGACAATATTCCCTTGCATTTAAGCATATTCCC-AGCATTCTTGGAGAT-----A---TAAAAAGCATGAATTGCACAAAATGTGGCGTGTGAAATGCTTTAACAATTG-TAAGTCCCTCAACAGAGATAATTGCTAGCATCATGAATACGACAGTAAGGGATAGCTTCCAGTTGAAGGGCTGCAGTGGC i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1463136 577 - 1813869 TTAATACTTTGATTTACAGGTCTGTGTATTTCAGTAACAGTTAGAGAGCATACAAACAAACACAGAGACACGCACG-CCACGTAGGAAAAGTGCAGCGGAACAGTAACTCCAGGAAGACAGTGTCACCAGAGTTCAGTCCACCTACAGCTGGCAGCTCCTCTCCAGGGGTTCGGTTAGCGGAGGAGGACGAGGTGAGTTACCAGGTAAACTCACCTCGAACCTGACCCAAAATCAGGACTCTGGTGACTCAAAGTGTTGTGAGGAGCCATTCTAAAGGGTCAGCAATTTCTACAGCAAGAA---AGAATAAAAGATTGGCCACATTATGTGGTGATATT----AAAGCAAATGACACGAAATGCATTATAGGGAAAGCGATCTGCTGTAATTCCTGAACTGAGGATGACGGTATTCCTTTGCATTTAAGCATATTCCC-AGCATTCTTGGAGAT-----A---TAAAAAGCATGAATTGCACAAAATGTGGCGTGTGAAATGTTTTAACAATTG-TAAGTCCCTCAGCGGAGATCATTGCTAGCATCATGAACACGACAGTAAGGGACAGCTTCCAGTTGAAGGGCTGTGGCGGC i aotNan1.NW_018494782v1 I 41 C 0 s dasNov3.JH569188 506450 483 + 760995 tttatagTTTGATACTTAGAT----------------------------------------------------------------------------GGAGCATTTACTCTAGGGAAAAAAT-TGACCAGA-TTTGGGGAACAGGC--TTGGAACATTTTTCTTAGGAGGTCTGTTAACTGAAGAAGAAGA----AGTTATCAAGTAATCTTACCTCTAATCTGACCTAAGACCAGAATCCTTGAGGTCAAAATTATAGTGAAGGGCTAGCCAAGTATGTCATCAATTTCTATAGTAAGAAATGAAAGCAGGTGATTGA----ATTAGACTATGATTTTTTTAAAAGCCAACAATGAAGAATATATTCTAGGAAAAATAATATAGTTTAAATACTGAAATGAGAATGAAAAAGTTCCATTGACGCTAACCTTTTTTTCAAGCATACT--AAGAC-----A---GAAAATGGATGAATGGAACAAAATATGGCAT-TTAAACATTTTAAAAAC-A-TAAGCCCAT------AAAAGATTGTTTG-ATTATGAACAATAAAATA----ATAGCTTCAAATTCAAAGCCTGTGGTAAT i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10924240 3001 - 12073884 I e canFam3.chr1 56141435 1862 + 122678785 I a score=10551275.000000 s hg38.chr6_KB021644v2_alt 38035 1153 + 185823 -CCGTGACATTCTGTTCC------CTCCTGCCTCAAGGCCCCTGG-CACTCACACTT---GGTA-ACATCCTCCCTTTGAGTTGGGA---CAAAGTCCCCGCG---GCTCACAGCCTTGGCCTCA--------GAGC-----------CTGCACCTCCT----------------GAGGCTCAAGCTGACA-GGTA-GTGGTTCAGGTGCCC-TG-----------------------CACATTCAGAGGCCAGTTGGAGAGGAAGAG-----------------------AGCAGGAAAACCAG------------ATGTAGGAACTGCAT---GG-----AGCAGCTCC--TCTCCTCCTTC-CCCTCC-TCTCCCC-CA------------------------TCTTAGGGAAAGTGCTAACCGTGT-----------CTGCTTCACCCTGCCCAGCTGCAGGAGTCCTGATGAGT---GG-----------------GGCCCACGCCTACCCTCAGCTCTTGGCCCTGG-TCCTGACG------------GTGGTGGAGTTTTAA----ACAAGC---ATTTTGGAATAGTTTGTTGTGCACAAATACATTT-TTTTTTTTAAAAAAAC--------TGCCTTACACC-----------TGCCTGTCCCAGGAATTCTGAGGACATCTGTA------TTTT----------TTTGTTT--------GTTT---TATGATCCTTAAGAATT---AGGAA---ATTTG-----------TCCTACCCTCAGAAAG-tttttttttctttttctttttc----tttttttttGAAAGTTAATGATTACCTATACAACCACAAAGGATAAAACATGTTTTGAAATT----GTT-------AAGTATAATT-GGAAAACATTTAGTCTCTATTTTAGATTATTTTGAGTTTAAATATAGTGATAGTTGTGTGGGG---TTTTTTTCAGTGTATGTGAAGCGTGTTTGTATCTGCAGGTTAGCACTTTGGTCTTTCTGGTGTTCCTGGCTTTCAGGTAGCTAC----AGAAGCATGTGGTGTG--TCTCAGTGGGTTTGTATCTGGGAGCAGCGAAGGAATGTAAATATCAGTGATGTTACCACCAATAAAACTCTATGCCATAAAATACCTCCCTTGTTTTTCAGAGGAGATGCACAGACTCCAGCCTTGGGTAAACAACAGAGCAC---AAGCGTGGTGCCCGTTAGTCAGCTGGGCCAGAGAGTTCA-AAGCCAACCCACATACACTAGCAAAG--ATAGTCCAGGGTGAAACTGGGGATAGAGAGGCTCAGAGAGTCCCAGGAGGGAGGTTG-TATGTCTCGTTGTGTAGGAGTCCTCTTTGCAGTGGAGAAAACCTGCTCC-TGTTAACCATTCCTTTTCCGCTCCTTTTATGAAAGCCATTGTGTTTAT s panTro5.chr6 173504440 1160 + 175400573 -CCGTGACATTCTGTTCC------CTCCTGCCTCAAGGCCCCTGG-CACTCACACTT---GGTA-ACATCCTCCCTTTGAGTTGGGA---CAAAGTCCCCGCG---GCTCACAGCCTTGGCCTCA--------GAGC-----------CTGCACCTCCT----------------GAGGCCCAAGCTGACA-GGTA-GTGGTTCAGGTGCCG-TG-----------------------CACATTCAGAGGCCAGTTGGAGAGGAAGAG-----------------------AGCAGGAAAACCAG------------ATGTAGGAACTGCAT---GG-----AGCGGCTCC--TCTCCTCCTTC-CCCTCC-TCTCCCC-CA------------------------TCTTAGGGAAAGTGCTAACCGTGT-----------CTGCTTCACCCTGCCCAGCTGCAGGAGTCGTGATGAGT---GG-----------------GGCCCACGCCTACCCTCAGCTCTTGGCCCTGG-TGCTGACG------------GTGGTGGAGTTTTAA----ACAAGC---ATTTTGGAATAGTTTGTTGTGCACAAATACATTT-TTTTT----AAAAAAC--------TGCCTTACACC-----------TGCCTGTCCCAGGAATTCTGAGGACATCTGTA------TTTT------TTTGTTTGTTT--------GTTT---TATGATCCTTAAGAATT---AGGAA---ATTTG-----------TCCTACCCTCAGAAAGttttttttttctttttctttttctctttttttttttGAAAGTTAATGATTACCTATACAACCACAAAGGATAAAACATGTTTTGAAATT----GTT-------AAGTATAATT-GGAAAACATTTGGTCTCTATTTTAGATTATTTTGAGTTTAAATATAGTGATAGTTGTGTGGGG---TTTTTTTCAGTGTATGTGAAACGTGTTTGTATCTGCAGGTTAGCACTTTGGTCTTTCTGGTGTTCCTGGCTTTCAGGTAGCTAC----AGAAGCATGTGGTGTGTCTCTCAGTGGGTTTGTATCTGGGAGAAGCGAAGGAATGTAAATATCAGTGATGTTACCACCAATAAAACTCTATGCCATAAAATACCTCCCTTGTTTTTCAGAGGAAATGCACAGACTGCAGCCTTGGGTAAACAACAGAGCAC---AAGCGTGGTGCCCGTTAGTCAGCTGGGCCAGAGAGTTCA-AAGCCAACCCACATACACTAGCAAAG--ATAGTCCAGGGTGAAACTGGGGATAGAGAGGCTCAGAGAGTCCCAGGAGGGAGGTTG-TATGTCTCGTTGTGTAGGAGTCCTCTTTGCAGAGGAGAAAACCTGCTCC-TGTTAACCATTCCTTTTCCGCTCCTTTTATGAAAGCCATTGTGTTTAT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171754802 1156 + 173848474 -CCGTGACATTCTGTTCC------CTCCTGCCTCAAGGCCCCTGG-CACTCACACTT---GGTA-ACATCCTCCCTTTGAGTTGGGA---CAAAGTCCCCGCG---GCTCACAGCCTTGGCCTCA--------GAGC-----------CTGCACCTCCT----------------GAGGCCCAAGCTGACA-GGTA-GTGGTTCAGGTGCCC-TG-----------------------CACATTCAGAGGCCAGTTGGAGAGGAAGAG-----------------------AGCAGGAAAACCAG------------ATGTAGGAACTGCAT---GG-----AGCGGCTCC--TCTCCTCCTT--CCCTCC-TCTCCCC-CA------------------------TCTTAGGGAAAGTGCTAACCGTGT-----------CTGCTTCACCCTGCCCAGCTGCAGGAGTCGTGATGAGT---GG-----------------GGCCCACGCCTACCCTCAGCTCTTGGCCCTGG-TGCTGACG------------GTGGTGGAGTTTTAA----ACAAGC---ATTTTGGAATAGTTTGTTGTGCACAAATACATTT-TTTTT----AAAAAAC--------TGCCTTACACC-----------TGCCTGTCCCAGGAATTCTGAGGACATCTGTA------TTTT------TTTGTTTGTTT--------GTTT---TATGATCCTTAAGAATT---AGGAA---ATTTG-----------TCCTACCCTCAGAAAG--ttttttttctttttctttttctct-tttttttttGAAAGTTAATGATTACCTATACAACCACAAAGGATAAAACATGTTTTGAAATT----GTT-------AAGTATAATT-GGAAAACATTTGGTCTCTATTTTAGATTATTTTGAGTTTAAATATAGTGATAGTTGTGTGGGG---TTTTTTTCAGTGTATGTGAAACGTGTTTGTATCTGCAGGTTAGCACTTTGGTCTTTCTGGTGTTCCTGGCTTTCAGGTAGCTAC----AGAAGCATGTGGTGTGTCTCTCAGTGGGTTTGTATCTGGGAGAAGCGAAGGAATGTAAGTATCAGTGATGTTACCACCAATAAAACTCTATGCCATAAAATACCTCCCTTGTTTTTCAGAGGAAATGCACAGACTGCAGCCTTGGGTAAACAACAGAGCAC---AAGCGTGGTGCCCGTTAGTCAGGTGGGCCAGAGAGTTCA-AAGCCAACCCACATACACTAGCAAAG--ATAGTCCAGGGTGAAACTGGGGATAGAGAGGCTCAGAGAGTCCCAGGAGGGAGGTTG-TATGTCTCGTTGTGTAGGAGTCCTCTTTGCAGAGGAGAAAACCTGCTCC-TGTTAACCATTCCTTTTCCGCTCCTTTTATGAAAGCCATTGTGTTTAT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11441200 1153 - 12463322 -CCGTGACATTCTGTTCC------CTCCTGCCTCAAGGCCCCTGG-CACTCACACTT---GGTA-ACATCCTCCCTTTGAGTTGGGA---CAAAGTCCCCGCG---GCTCACAGCCTTGGCCTCA--------GAGC-----------CTGCACCTCCT----------------GAGGCCCAAGCTGACA-GGTA-GTGGTTCAGGTGCCC-TG-----------------------CACATTCAGAGGCCAGTTGGAGAGGAAGAA-----------------------AGCAGGAAAACCAG------------ATGTAGGAACTGCAT---GG-----AGCGGctcc--cctcctccttc-ccctcc-tctcccc-CA------------------------TCTTAGGGAAAGTGCTAACCGTGT-----------CTGCTTCACCCTGCCCAGCTGCAGGAGTCCTGATGAGT---GG-----------------GGCGCACGCCTACCCTCAGCTCTTGGCCCTGG-TGCTGACG------------GTGGTGGAGTTTTAA----ACAAGC---ATTTTGGAATAGTTTGTTGTGCACAAATACATTT-TTTTA----AAAAAAC--------TGCCTTACACC-----------TGCCTGTCCCAGGAATTCTGAGGACATCTGTA------TTTT----------TTTGTTT--------GTTT---TATGATCCTTAAGAATT---AGGAA---ATTTG-----------TCCTACCCTCAGAAAG-tttttttttctttttctttttcttt-tttttttttGAAAGTTAATGATTACCTATACAACCATAAAGGATAAAACATGTTTTGAAATT----GTT-------AAGTATAATT-GGAAAACATTTAGTCTCTATTTTAGATTATTTTGAGTTTAAATATAGTGATAGTTGTGTGGGG---TTTTTTTCAGTGTATGTGAAGCGTGTTTGTATCTGCAGGTTAGCACTTTGGTCTTTCTGGTGTTCCTGGCTTTCAGGTAGCTAC----AGAAGCATGTAGTGTGTGTCTCAGTGGGTTTGTATCTGGGAGCAGCGAAGGAATGTAAATATCAGTGACGTTACCACCAACAAAACTCTATGCCATAAAATACCTCCCTTGTTTTTCA-AGGAAATGCACAGACTCCAGCCTTGGGTAAACAACAGAGCAC---AAGTGTGGTGCCCGTTAGTCAGCTGGGCCAGAGAGTTCA-AAGCCAACCCACATACACTAGCAAAG--ATAGTCCAGGGTGAAACTGGGGATAGAGAGGCTCAGAGAGTCCCAGGAGGGAGGTTG-TATGTCTCGTTGTGTAGGAGTCCTCTTTGCAGTGGAGAAAACCTGCTCC-TGTTAACCATTCCTTTTCTGCTCCTTTTATGAAAGCCATTGTGTTTAT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156261338 1158 + 157873769 -CCATGACGTTCTGTTCC------CTCCTGCCTCAAGGCCCCTGG-CACTCACACTT---GGTA-ACATCCTCCCTTTGAGGTGGGA---CAAAGTCCCCGCG---GCTCACAGCCTTGGCCTCA--------GAGC-----------CTGCACCTCCTGCTTCCCTGATCTTGGGAGGCCTGAGCTGACA-GGTA-GTGGTTCAGGTGCCC-TG-----------------------CACATTCAGAGGCCAGCTGGAGAGGAAGAG-----------------------AGCAGGAAAACCAG------------ATATAGGAACTGCAT---GG-----AGCGGCTCC--TCTCCTCCTTC-CCTTCC-TCTCCCC-CA------------------------TCTTAGGGAAAGTGCTAACCGTGT-----------CTGCTTCATCCTGCCCAGCTGCAGGAGTCCTGATGAGC---AG-----------------GGCCCACGCCTACCCTCCGCTCTTGGCCCTGG-TGCTGACG------------GTGGTG--GTTTTAA----ACGAGC---ATTTTGGAATAGTTTGTTGTTCACAAATACATTT-TTTA-----AAAAAAC--------TGCCTTACACC-----------TGCCTGTCCCAGGAATTCTGAGGACATCTGTA------TTTT----------TTT-TTT--------GTTT---TATGATCCTTAAGAATT---AGGAA---ATTTG-----------TCCTACCCTCAGAAAG---tttttttctttttctt--------tttttttttGAAAGTTAATTATTACCTATACAACCACAAAGGATAAAACATATTTTGAAATT----GTT-------AAGTATAATT-GGAAAACATTTAGTCTCGATTTTAGATTATTTTGAGTTTAAATATAGTAATAGTTCTGTGGGG---TTTTTTTCAGTATATGTGAAACGTTTTTGTGTCTGCAGGTTAGCACTTTGGTCTTTCTGGTGTTCCTGGCTTTCAGTTAGCTAC----GAAAGCACGTGATGTGTCTCTCAGTGGGTTTATATCTGGGAGCAGTGAAGGAACGTCAATATCAGTGATA-TACCACCAATAAAACTCTATGCCAGAAAATACCTCCCTTGTTTTTCAGAGGAAATGCACAGACTCCAGCCTTGGGTAAACAACAGAGCAC---AAGCGTGGTGCCCATCAGTCAGCTGGGCCAAAGAGTTCA-AAGCCAACCCACATACACTAGCAAAGAAAAAGTCCAGGGTGAAACTGGGGATAGAGAGGCTCAGAGAGTCCCAGGAGGGAGGTCG-TATGTCTCGTGGTGTAGGAGTCCTCCTTGCGGTGGAGAAAACCTGCTCC-TGTTAACCATTCCTTTTCCGCTCCTTTTATAAAAGCCATTGTGTTTAT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170293542 1167 + 172585720 -CCGTGGCATTCTGTCCC------CTACTACCTCGAGGCCCCTGG-CACTCACACTT---GGAA-ACATCCTCCCTTTGAGTTGGGG---CAAAGTCCCTGCG---GCTCACAGCCTTGGGCTCA--------GAGC-----------CTGCACCTCCTGCTTCCCTGCTCTTGGGAAGCCTGAGCTGACA-GGTA-ATGGTTCAGGTGCCC-TG-----------------------AACATTCAGAGGCCAGGTGGAGAGGAAGAG-----------------------AGCAGGAAAACCAG------------ATGTAGGAACTGCAT---GG-----AGCGGCTCC--TCTCCTCCTTC-CCTTC---CGCCCC-CA------------------------TCTTAGGGAAGGTGCTAACCATGT-----------CTGCTTCACCCTGCCCAGTTGCAGGAGTCGTGATGAGC---GG-----------------GGCCCACACCCACCCTCAGCTCTTGGCCCTGG-TGCTGATG------------GTGCTGGAGTTTTAA----ACAAAC---GTTTTGGAATAGTTTGTTGTGCACAAATACATTTGTTTTT----AAAAAAC--------TGCCTTACACT-----------TGCCTGTCCCAGGAATTCTGAGGACATCTGCA-----TTTTT--------------------------TTT---TGTGATCCTTAAGAATT---AGGAA---ATTTG-----------TTCTACCCTCAGAAAGAtttttttctttttttcttttttctttttttttttGGAAAGTTAGTGATTACCTATACAACCACAAATGATAAAACATGTTTTGAAATT----GTT-------AAGTATAATT-GGAAAACATTTAGTCTCGATTTTAGATTA-TTTGAGTTTAAATGTAATAATAGCTGTGTGGGG--TTTTTTTTCAGTGTGTGTGAAACGTTTTTGTATCTGCAGGTTAGCCATTTGGTCTTTCTGGTGTTCCTGGCTTTGAATTAGCTAC----AAAAGCATGTGATGTGTCTCTCAGTGGGTTTATATCTGGGATCAGTGAAAGAATGTAAATATCAGTGATGTTACCACCAATAAAACTCTACGCAATAAAATACCTCCCTTGTTTTTCGAAGGAAATGCACTGACTCCAGCCTTGGGTAAACAACAGAGCACATGAAGCATGGTGCCCATTAGTCAGCTGGGCCAAAGAGTTCA-AAGCCAACCCACATACACTAGCAAGGAAATAGTCCAGGGTGAAACTGGGGATAGAGAGGCTCAGAGAGTCCCAGGAGGGGAGGTC-TATGTCTCTTGGTGTAGGAGTCCTCTTTGCAGTGGAGAAAACCTGCTCC-TGTTAACCATTCCTTTTCCACTCCTTTTATAAAACCCATTG--TTTAT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169039239 1167 - 170955103 -CCGTGGCATTCTGTCCC------CTACTACCTCGAGGCCCCTGG-CACTCACACTT---GGAA-ACATCCTCCCTTTGAGTTGGGG---CAAAGTCCCTGCG---GCTCACAGCCTTGGGCTCA--------GAGC-----------CTGCACCTCCTGCTTCCCTGCTCTTGGGAAGCCTGAGCTGACA-GGTA-ATGGTTCAGGTGCCC-TG-----------------------AACATTCAGAGGCCAGGTGGAGAGGAAGAG-----------------------AGCAGGAAAACCAG------------ATGTAGGAACTGCAT---GG-----AGCGGCTCC--TCTCCTCCTTC-CCCTC---CGCCCC-CA------------------------TCTTAGGGAAGGTGCTAACCATGT-----------CTGCTTCACCCTGCCCAGTTGCAGAAGTCGTGATGAGC---GG-----------------GGCCCACACCCACCCTCAGCTCTTGGCCCTGG-TGCTGATG------------GTGCTGGAGTTTTAA----ACAAAC---GTTTTGGAATAGTTTGTTGTGCACAAATACATTTGTTTTT----AAAAAAC--------TGCCTTACACT-----------TGCCTGTCCCAGGAATTCTGAGGACATCTGCA-----TTTTT--------------------------TTT---TGTGATCCTTAAGAATT---AGGAA---ATTTG-----------TTCTACCCTCAGAAAGAtttttttctttttttcttttttctttttttttttGGAAAGTTAGTGATTACCTATACAACCACAAATGATAAAACATGTTTTGAAATT----GTT-------AAGTATAATT-GGAAAACATTTAGTCTCGATTTTAGATTA-TTTGAGTTTAAATGTAATAATAGCTGTGTGGGG--TTTTTTTTCAGTGTGTGTGAAACGTTTTTGTATCTGCAGGTTAGCCATTTGGTCTTTCTGGTGTTCCTGGCTTTGAATTAGCTAC----AAAAGCATGTGATGTGTCTCTCAGTGGGTTTATATCTGGGATCAGTGAAAGAATGTAAATATCAGTGATGTTACCACCAATAAAACTCTACGCAATAAAATACCTCCCTTGTTTTTCGAAGGAAATGCACTGACTCCAGCCTTGGGTAAACAACAGAGCACATGAAGCATGGTGCCCATTAGTCAGCTGGGCCAAAGAGTTCA-AAGCCAACCCACATACACTAGCAAGGAAATAGTCCAGGGTGAAACTGGGGATAGAGAGGCTCAGAGAGTCCCAGGAGGGGAGGTC-TATGTCTCTTGGTGTAGGAGTCCTCTTTGCAGTGGAGAAAACCTGCTCC-TGTTAACCATTCCTTTTCCACTCCTTTTATAAAAGCCATTG--TTTAT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8326072 1164 + 10161646 -CCGTGACATTCTGTCCC------CTACTACCTCGAGGCCCCTGG-CACTCACACTT---GGAA-ACATCCTCCCTTTGAGTTGGGG---CAAAGTCCCTGCG---GCTCACAGCCTTGGGCTCA--------GAGC-----------CTGCACCTCCTGCTTCCCTGCTCTTGGGAAGCCTGAGCTGACA-GGTA-ATGGTTCAGGTGCCT-TG-----------------------AACATTCAGAGGCCAGGTGGAGAGGAAGAG-----------------------AGCAGGAAAACCAG------------ATGTAGGAACTGCAT---GG-----AGCGGCTTC--TCTCCTCCTTC-CCCTC---TGCCCC-CA------------------------TCTTAGGGAAGGTGCTAACCATGT-----------CTGCTTCACCCTGCCCAGTTGCAGGAGTCGTGATGAGC---GG-----------------GGCCCACACCCACCCTCAGCTCTTGGCCCTGG-TGCTGATG------------GTGCTGGAGTTTTAA----ACAAAC---GTTTTGGAATAGTTTGTTGTGCACAAATACATTTGTTTTT----AAAAAAC--------TGCCTTACACT-----------TGCCTGTCCCAGGAATTCTGAGGACATCTGCA------TTTT--------------------------TTT---TGTGATCCTTAAGAATT---AGGAA---ATTTG-----------TTCTACCCTCAGAAAGAtttttttctttttttcttttttc-ttttttttttGGAAAGTTAGTGATTACCTATACAACCACAAATGATAAAACATGTTTTGAAATT----GTT-------AAGTATAATT-GGAAAACATTTAGTCTCGATTTTAGATTA-TTTGAGTTTAAATGTAATAATAGCTGTGTGGGG---TTTTTTTCAGTGTGTGTGAAACGTTTTTGTATCTGCAGGTTAGCCATTTGGTCTTTCTGGTGTTCCTGGCTTTGAATTAGCTAC----AAAAGCATGTGATGTGTCTCTCAGTGGGTTTATATCTGGGATCAGTGAAAGAATGTAAATATCAGTGATGTTACCACCAATAAAACTCTACGCAATAAAATACCTCCCTTGTTTTTCGAAGGAAATGCACTGACTCCAGCCTTGGGTAAACAACAGAGCACATGAAGCATGGTGCCCATTAGTCAGCTGGGCCAAAGAGTTCA-AAGCCAACCCACATACACTACCAAGGAAATAGTCCAGGGTGAAACTGGGGATAGAGAGGCTCAGAGAGTCCCAGGAGGGGAGGTC-TATGTCTCTTGGTGTAGGAGTCCTCTTTGCAGTGGAGAAAACCTGCTCC-TGTTAACCATTCCTTTTCCACTCCTTTTATAAAAGCCATTG--TTTAT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1355621 1168 + 3144229 -CCGTGACATTCTGTCCC------CTACTACCTCGAGGCCCCTGG-CACTCACACTT---GGAA-ACATCCTCCCTTTGAGTTGGGG---CAAAGTCCCTGTG---GCTCACAGCCTTGGCCTCA--------GAGC-----------CTGCACCTCCTGCTTCCCTGCTCTTGGGAAGCCCGAGCTGACA-GGTA-ATGGTTCAGGTGCCC-TG-----------------------AACATTCAGAGGCCAGGTGGAGAGGAAGAG-----------------------AGCAGGAAAACCAG------------ATGTAGGAACTGCAT---GG-----AGCGGCTCC--TCTCCTCCTTC-CCCTC---CGCCCC-CA------------------------TCTTAGGGAAAGTGCTAACCGTGT-----------CTGCTTCATCCTGCCCAGTTGCAGGAATCGTGATGAGC---CG-----------------GGCCCACACCCACCCTCAGCTCTTGGCCCTGG-TGCTGATG------------GTGGTGGAGTTTTAA----ACAAAC---GTTTTGGAATAGTTTGTTGTGCACAAATACATTTGTTTTT----AAAAAAC--------TGCCTTACACT-----------TGCCTGTCCCAGGAATTCTGAGGACATCTGCATTTTTTTTTT--------------------------TTT---TGTGATCCTTAAGAATT---AGGAA---ATTTG-----------TTCTGTCCTCAGAAAGAtttttttcttttttccttttttc----tttttttGGGAAGTTAGTGATTACCTATATAACCACAAATGATAAAACATGTTTCGAAATT----GTT-------ACGTATAATT-GGAAAACATTTAGTCTCGATTTTAGATTA-TTTGAGTTTAAATATAATAATAGTTGTGTGGGT--TTTTTTTTCAGTGTGTGTGAAACGTTTTTGTATCTGCAGGTTAGCCCTTTGGTCTTCCTGGTGTTCCTGGCTTTGAATTAGCTAC----AAAAGCATGTGATGTGTCTCTCAGTGGGTTTATATCTGGGATCAGTGAAAGAATGTAAATATCAGTGATGTTACCACCAATAAAACTCTATGCAATAAAATACCTCCCTTGTTTTTCGAAGGAAATGCACTGACTCCAGCCTTGGGTAAACAACAGAGCACATGAAGCATGGTGCCCATTAGTCAGCTGGGCCAAAGAGTTCA-AAGCCAACCCACATACACTAGCAAGGAAATAGTCCAGGGTGAAACTGGGGATAGAGAGGCTCAGAGAGTCCCAGGAGGGGAGGTC-TATGTCTCTTGGTGTAGGAGTCCTCGTTGCAGTGGAGAAAACCTGCTCC-TGTTAACCATTCCTTTTCCACTCCTTTTATAAAAGCCATTG--TTTAT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96634934 1160 + 98384682 -CCGTGACATTCTGTTCC------CTACTACCTCGAGGCCCCTGG-CACTCACACTT---GGAA-ACATCCTCCCTTTGAGTTGGGG---CAAAGTCCCTGCG---GCTCACAGCCTTGGCCTCA--------GAGC-----------CTGCACGTCCTGCTTCCCTGCTCTTGGGAAGCCCGAGCTGACA-GGTA-ACGGTTCAGGTGCCC-TG-----------------------AACATTCAGAGGCCAGGTGGAGAGGAAGAG-----------------------AGCAGGAAAACCAG------------ATGTAGGAACTGCAT---GG-----AGCGGCTCC--TCTCCTCCTTC-CCCTC---GGCCCC-CA------------------------TCTTAGGGAAAGTGCTAACCGTGT-----------CTGCTTCACCCTGCCCAGTTGCAGGAGTTGTGATGAGC---GG-----------------GGCCCACACCCACCCTCAGCTCTTGGCCCTGG-TGCTAATG------------GTGGTGGAGTTTTAA----ACAAGC---GTTTTGGAATAGTTTGTTGTGCACAAATACATTTGTTTTT----AAAAAAC--------TGCCTTACACT-----------TGCCTGTCCCAGGAATTCTGAGGACATCTGCA------TTTT--------------------------TTT---TGTGATCCTTAAGAATT---AGGAA---ATTTG-----------TTCTACCCTCAGAAAGAG-------ttttttctttttttc----tttttttGGAAAGTTAGTGATTGCCTATACAACCACAAATGATAAAACATGTTTTGAAATT----GTT-------AAGTATAATT-GGAAAACATTTAGTCTCGATTTTAGATTA-TTTGAGTTTAAATGTAATAATAGTTGTGTGGGGTTTTTTTTTTCAGTGTGTGTGAAACATTTTTGTATCTGCAGGTTAGCCCTTTGGTCTTTCTGGTGTTCCTGGCTTTGAATTAGCTAC----AAAAGCATGTGATGTGTCTCTCAGTGGGTTTATATCTGGGATCAGTGAAAGAATGTAAATATCAGTGATGTTACCACCAATAAAACTCTACGCAATAAAATACCTCCCTTGTTTTTGGAAGGAAATGCACTGACTCCAGCCTTGGGTAAACAACAGAGCACATGAAGCATGGTGCCCATTAGTCAGCTGGGCCAAAGAGTTCA-AAGCCAACCCACATACACTAGCAAAGAAATAGTCCAGGGTGAAACTGGGGATAGAGAGGCTCAGAGAGTCCCAGGAGGGGAGGTCGTATGTCTCTTGGTGTAGGAGTCCTCTTTGCAGTGGAGAAAACCTGCTCC-TGTTAACCATTCCTTTTCCACTCCTTTTATAAAAGCCATTGTGTTTAT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8179277 1159 - 10857215 -CCGTGACATTCTGTCCC------CTACTACCTCGAGGCCCCTGG-CACTCACACTT---GGAA-ACATCCTCCCTTTGAGTTGGGG---CAAAGTCCCTGTG---GCTCACAGCCTTGGCCTCA--------GAGC-----------CTGCACCTCCTGCTTCCCTGCTCTTGGGAAGCCCGAGCTGACA-GGTA-ATGGTTCAGGTGCCT-CG-----------------------AACATTCAGAGGCCAGGTGGAGAGGAAGAG-----------------------AGCAGGAAAACCAG------------ATGTAGGAACTGCAT---GG-----AGCGGCTCC--TCTCCTCCTTC-CCCTC---CGCCCC-CA------------------------TCTTAGGGAAAGTGCTAACCGTGT-----------CTGCTTCATCCTGCCCAGTTGCAGGAATCGTGATGAGC---CG-----------------GGCCCACACCCACCCTCAGCTCTTGGCCCTGG-TGCTGATG------------GTGGTGGAGTTTTAA----ACAAAC---GTTTTGGAATAGTTTGTTGTGCACAAATACATTTGTTTTT----AAAAAAC--------TGCCTTACACT-----------TGCCTGTCCCAGGAATTCTGAGGACATCTGCA------TTTT--------------------------TTTGTGTGTGATCCTTAAGAATT---AGGAA---ATTTG-----------TTCTGTCCTCAGAttttt----ttcttttttccttttttc----tttttttGGGAAGTTAGTGATTACCTATACAACCACAAATGATAAAACATGTTTCGAAATT----GTT-------ACGTATAATT-GGAAAACATTTAGTCTCGATTTTAGATTA-TTTGAGTTTAAATGTAATAATAGTTGTGTGGGG-TTTTTTTTTCAGTGTGTGTGAAACGTTTTTGTATCTGCAGGTTAGCCCTTTGGTCTTCCTGGTGTTCCTGGCTTTGAATTAGCTAC----AAAAGCATGTGATGTGTCTCTCAGTGGGTTTATATCTGGGATCAGTGAAAGAATGTAAATATCAGTGATGTTACCACCAATAAAACTCTACGCAATAAAATACCTCCCTTGTTTTTCGAAGGAAATGCACTGACTCCAGCCTTGGGTAAACAACAGAGCACATGAAGCATGGTGCCCATTAGTCAGCTGGGCCAAAGAGTTCA-AAGCCAACCCACATACACTAGCAAGGAACTAGTCCAGGGTGACACTGGGGATAGAGAGGCTCAGAGAGTCCCAGGAGGGGAGGTC-TACGTCTCTTGGTGTAGGAGTCCTCGTTGCAGTGGAGAAAACCTGCTCC-TGTTAACCATTCCTTTTCCACTCCTTTTATAAAAGCCA-----TTTAT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15573287 1150 - 23502949 -CCGTGACATTCTGTCCC------CTACTACCTCGAGGCCCCCAG-CACTCGCACTT---GGAA-ACATCCTCCCTTTGAGTTGGGG---CAAAGTCCCTGCG---ACTCACAGCCTTGGCCTCA--------GAGC-----------CTGCACCTCCTGCTTCCCTGCTCTTGGGAAGCCCGAGCTGACA-GGTATATGGTTCAGGTGCCT-TG-----------------------AACATTCAGAGGCCAGGTGGAGAGGAAGAG-----------------------ACCAGGAAAACCAG------------ATGTAGGAACTGCAT---GG-----AGTGGctcc--tctcctccttc-ccctc---ctccCCGCA------------------------TCTCAGGGAAAGTGCTAACCATGT-----------CTGCTTCACCCTGCCGAGTTGCAGGAGTCCTGATGAGC---GG-----------------GGCCCACACCCACCCTCAGCTCTTGGCCTTGG-TGCTGATG------------GCGGTGGAGTTTTAA----ACAAGC---GTTTTGGAATAGTTTGTTGTGCACAAATACATTTATTTTT----TAAAAAC--------TGCCTTACACT-----------TGCCTGTCCCAGGAATTCTGAGGACATCTGCA------TTTT--------------------------TTT---GGTGATCCTTAAGAATT---AGGAA---ATTTG-----------TTCTACCCTCAGAAAGAT-------TTTTTTCTTATTTCC----TTTTTTTGGCAAGTTAGTGATTACCTATACAACCACAAATGATAAAACATGTTTTGAAATT----GTT-------AAGTATAATT-GGAAAACATTTAGTCTCGATTTTAGATTA-TTTGAGTTTAAATGTAATAATGGTTGTGTGGGG---TTTTTTTCGGTGTGTGTGAAACGTTTTTGTATCTGCAGGTCAGCCCTTTGGTCTTTCTGGTGTTCCTGGCTTTGAATTAGCTAT----AAAAGCATGTGATGTGTCTCTCGGTGGGTTTATATCTGGGATCAGTGAAAGAATGTAAATATTGGTGATGTTACCACCAATAAAACTCTACGCAATAAAATACTTCCCTTGTTTTTCGAAGGAAATGCACTGACTCCAGCCTTGGGTAAACAACAGAGCACATGAAGCATGGTGCCCGTTAGTCAGCTGGGCCAAAGAGCTCA-AAGCCAACCCACATACACTAGCAAAGAAATAGTCCAGGGTGAAACTGGGGATAGAAAGGCTCAGAGAGTCCCAGGAGGGGAGGTC---------TTGGTGTAGGAGTCCTCTTTGCAGGGGAGAAAACCTGCTCC-TGTTAACCATTCCTTTTCCACTCCTTTTATAAAAGCCATTATGTTTAT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169838834 1102 + 171630274 -CTGTGACCTTCTGTCCT------CTCCTGCCTCGAGGTCCCTGG-TACTCTCACCT---GGGT-ACCATCCTCCTTTGAGTCTGAG---CAAAGTCACTGTG---GCTCACAGCCTTGTCCTCC--------CAGC-----------CTGCACCTCCTGCTTCCCTGCTCTTGGGAGGCTGGAGATGACA-GGTA-ATGGGTCGGGTCCCCGCG-----------------------CACATTCAGAGGCCAGGAGGAGAGGAGGAC-----------------------AGCGGGAAAACCAG------------GTGTAGGAACTGCTT---GG-----GGCAGCTCC--TCTCCTTCTCC-C---------CCCT-CA------------------------TCTTAGGGAAAGCACTCAGTGTCT-----------GAGCTTCACCCTGCCTGGCCTCGGGCGTCGTGATGAGC---GG-----------------GACCCACGCCCACCCTCAGCTCTTGGCCCTGG-TGCTGATG------------GAGGTAGACTTTTAA----ACAAGC---A----------------------------------TTTTA----AAAGACC--------TGCCTTATACCCCCACCTCACGCCCCCATCCCAGGAATTCTGAGGAC-TCTGAG------TTTT-------------------------TTTT---AATTATCTTTAAGAATT---ATGAA---ATTTG-----------TCCTAACCTCAGAAAA-------TAGTTTTTTCTTTT-------TCTTTCTGGAAAGTTAATGATTTCCTATATAAGCACAAATGATAAAACGTGTTTTGAAATT----GTC-------AAGTCTAAGT-GGAAAACATCTAGTCTAGATTCTGGATTATTCTG------AGTGTAGTAACAGTTGCGT-GGG----TTGTTTGAGTGTATATGAAACGTTTTTGTATCTGCAGGTTTGCCCTTTGATCTCTCTGGGGTTCCTGGCTTTCAGTTAGCTGC----AAAAGCATGTGATGTGTCTCTCAGTGGGTTTGTATCTGGGAGCAGTGAAGGAATGTAAATATCGGTGATGTTACCACCAATAAAAGTCTATGCAATAAAATACCTCCCTTGTTTTTCAAAGGAAATGCACTGA-GCCAGCCTTGGGTAAA-AACAGAGCACATGAAGC-TGGTGCCCATTAGTCTGCTGGGCCAAAGAGTTCA-AAGCCAGCCCACATACACTGGCAAAGAAATAGTTCGGGGTGAAGCCGGGGATAGAGATGCC----GAGTCCT----------GTCGTATATCTCTGGGTGTAGGAGTCCTCTTCGAGGT-GGAGAAAACCACTCGGCGTTAACCCTTCCTTTCCCACTGCTTTTATAAAAGCCATCCTGTTTAC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1257957 1138 - 2905041 -CTGTGACC-TCTGTCCT------CTCCTGCCTCAAGGCCCCTGC-TACTCTCGCTT---GGGT-ACCATCCTCCTTCGAGTCTGAG---CAAAGTCACCGTG---GCTCACAGCCTTGTCCTCC--------GGGC-----------CTGCACCTCCTGCTTCCCTGCTCTTGGGAGGCTGGAGCTGACA-GGTA-ATGGTTCGGGCCCCC-CA-----------------------CACATTCAGAGGCCAGGGGGAGGGGAAGAC-----------------------AGCAGGAAAACCAG------------ATGTCGGAACTGCTT---GG-----AACGGCTCC--TCTCCTTCTCC-CCTCC--TCTCCCT-CA------------------------TCCTAGGGAGGGCACTCACTGTCT-----------CCACTTCACCCTGCCTGGCCTCAGGAGTCGTGGTGAGC---GG-----------------GGCCCACACCCACCCTCAGCTCTTGGCCCTGG-TGCTGATG------------GAGGTGGAGTTTTAA----ACAAGC---A----------------------------------TTTTA----AAAGAAC--------TGCCTTATAACCCCACCCCAGGCCCTCATCCCAGGAATTCTGAGGACGTCTACA------TTttattattattattattattattattattat---tattatCTTTAAGAATT---AAAAA---ATTTG-----------TCCTACCCTCAGAAAA-------TAGTTTTTTCTTTT-------TCTTTCTGGAAAGTTAATGATTTCCTAGATAAACACAAATGACAAAATGCGTTTTGAAATT----GTT-------AAGTCTAACT-GGAAAACATTTAGTCTACATTTTGGATTATTTTGAGTTTAAGTGTAGTAATAGTTGTGTGGGG----TTGTTTGAGTGTATATGAAACGTTTTTGTATCTGCAGGTTTGCACTTTGATCTCTCTGGGGTTCCTGGTTTTCAATTAGCTGC----AAAAGCATGTGCTGTGTCTCTCAGTGGGTTTGTATCTGGGAGCAGTGAAGGAATGTAAATATCGGTGATGTTACCACCAATAAAAGTCTATGCAATAAAATACCTCCCTTGTTTTTCAAAGGAAACGCACTGA-GCCAGCCTTGGGTAAA-AACAGAGCACACGAAGC-TGGTGCCCATTAGTCTGCTGGGCCAAAGAGTTCA-AAGCCAGCCCACATACACTGGCAAAGAAATAGTTCAGGGTGAAACTGGGGATAGACAGGCTC--AGAGTCCTGGGAGGGGAGGTCGTCTGTCTCTGGGTGTAGGAG--------------GAGAGAAGCTGCTCAGCGTTAACCCTTCCTTTTCCACT-CCTTTATAAAAGCCATTGTGTTTCC i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1214180 1144 - 2164891 -CTGTGACCTTCTGTCCT------CTCCTGCCTCCATGCCACTGG-TACTCTCGCTT---GGGT-ACCATCCTCCTTTGAGTCTGAG---CAAAGTCACCGTG---GCTCACAGCCTTGTCCTCC--------GAGC-----------CTGCACCTCCTGCTTCTCTGCTCTTGGGAGGCTGGAGCTGACA-GGTA-ATGGTTCGGGTCCCC-TG-----------------------CACATTCAGAGGCCAGGAGGAGAGGAAGAC-----------------------AGCAGGAAAACCAG------------ATGCAGGAACTGCTT---GG-----AACGGctcc--tctccttctccgcctcc--tctccct-ca------------------------tcTTAGGAAGAGCACTCATTGTCT-----------CTGCTCCACCCTGCCTGGCCTCAGGAGTCGTGATGAGC---CG-----------------GGCCCACACCCACCCTCAGCTCTTGGCCCTGG-TGCTGATG------------GAGGTGGAGTTTTGA----ACAAGC---A----------------------------------TTTTA----AAAGAAC--------TGCCTTATACCCCCACCCCAGGCCCTCATCCCAGGAATTCCGAGGACATCTGCt------ttgttttttgttttttgtttt--------tttt---AATTATCTTTAAGAATT---AGGAA---ATTTG-----------TCCTACCCTCAGAAAA-------TAGTTTTTTCTTTT-------TCTTTCTGGAAAGTTAATGATTTCCTATATAAACACAAATGATAAAACGTGCTTTTAAATT----GTT-------AAGTCTAACT-GAAAAACATTTAGTCTAGATTTTGGATTATTTTA------AGTGTAGTAATAGTTGTGTGGGG----TTGTTTGAGTGTATCTGAAAGGTTTTTGTATCTGCAGGTTTGCACTTTGATCTCTCTGGGGTTCCTGGCTTTCAATTAGCTGCAAAAAAAAGCATGTGATGTGTCTCTCAGTGGGTTTGTATCTGGGAGCAGTGAAGGAATGTAAATATCAGTGATGTTACCACCAATAAAAGTCTATGCAATAAAATACCTCCCTTGTTTTTCAAAGGAAATGCACAGA-GCCAGCCTTGGGTAAA-AACAGAGCACATGAAGC-TGGTGCCCATTAGTCTGCTGGGCCAAAGAGTTCA-AAGCCAGCCCACATACACTGGCAAAGAAATAGTTCAGGGTGAAACTGGGGATAGAGAGGCTC--AGAGTCCTGGGAGGGGAGGTCGTATATCTCTGGGTATAGGAGTCCTCCTCGCGGTGGAGAAAACCTGCTCAGCGTTAACCCTTCCTTTTCCACT-CCTTTATAAAAGCCATTGTGTTTCC i cebCap1.NW_016107695v1 C 0 I 41 s aotNan1.NW_018494782v1 1463713 1128 - 1813869 -CTGTGACCTTCTGTCCT------CTCCTGCCTCGAGGCTCCTGG-TACTCTCGCTT---GGGT-ACCAGCTGCCTTTGAGTCTGAG---CAAAGTCACCGTG---GCTCACAGCCTCGTCCTCC--------GAGC-----------CTGCACCTCCTGCTTCCCTGCTCTTGGGAGGCTGCAGCTGACA-GGTA-ATGGTTCGGGTCCCC-TG-----------------------CACA-TCAGAGGCCAGGAGGACAGGAAGAC-----------------------AGCAGGAAAAGGAG------------ATTTAGGAACTGCTT---GG-----AGCGGCTCC--TCTCCTTCTCC-CCCTC--TTTCCCT-CA------------------------TCTTAGGGGGACCGCTCATTATCT-----------CCGCTTCACCCTGCCTGGCCTCGGGAGTCGTGATGAGC---GG-----------------GGCCCACACCCACCCTCAGCTCTGGGCCCTGG-TGCTGATG------------GAGGTGGAGTTTTAA----ACAAGC---A----------------------------------CTTTA----AAAGAAC--------TGCCTTACACCCCCACCCCACCCCCCAATCCCAGGAATTCTGAGGACATCTGCA------TTTT-------------------------TTTT---TATTATCTTTAAGAATT---AGGAA---ATTTG-----------TCCTACCCTCGGAAAA-------TAGTTTTTTCTTTT-------TCTTTCTGGAAAGTCAATGATTTCCTATATAAACAGAAATGATAAAACGTGTTTTGAAATT----GTT-------AAGTCTAACT-GGAAAACATTTAGTCTAGATTTTGGATTATTTTGAGTTTAAGTGTAGTAATAGTTGTGTGGAG----TTGTTTGAGTGTATATGAAACGTTTTTGTATCTGCACGTTTGCACTTTGATCTCTCTGGGGTTCCTGGCTTTCAATTAGCTGC----AAAAGCATGTGATGTGTCTCTCAGTGGGTTTGTATCTGGGAGCAGTGAAGGAATGTAAATATCAGTGATGTTACCACCAATAAAAGTCTATGCAATAAAATACCTCCCTTGTTTTTCAAAGGAAATGCACTGA-GCCAGCCTTGGGTAAA-AACAGAGCACATGAAGC-TGGTGCCCATTAGTCTGCTGGGCCAAAGAGTTCA-AAGCCAGCCCACGTACACTGGCAAAGAAACAGTTCAGGGTGAAATTGCGGCTAGAGAGGTTC--AGAGTCCTGGGAGGGGAGGTCGTGTATCTCTGGGTATAGGAGTCCTCTTCACGGCGGAGAAAACCTGCTCAGCGTTAACCCTTCCTTTTCCACTCGTTTTATAAAGGCCATTGTGTTTAC i aotNan1.NW_018494782v1 C 0 C 0 s canFam3.chr1 56143297 1170 + 122678785 -CCGTGGCTGCTTGTTCCACAGGACCCCCGGCTTTGGGCCCCTGGCCAGTCATGCCT---GGTATGGAGGCTTAGCCTGAGTCTGGGCCTCAGGGGCATGATGCTCGCTCACGATCTTGGCATTA--------AGGCTGCCAAATAGACTCCAAGTCCTGC--------------CAGGCACCACCTGATA-GGAC------------CCCC-CG-----------------------GGCA------GGCCAGGTGGGTAGGAGGAGCCC------------------CAAGACGAGGGTCCAG--------GGTCATAGGGGAGCTGCT------------GTGGCCCCTGTTTGCCCCTTC-CCGCCA-ATGCAGG-CAGGGCAGGGCTGCTGGGAGTAGGGGTCCTGGGGGCAGAA--AGCAGCAT-----------CTCCCACAGGCGGCTTGGCTGCAGGAGCAGCGTTGAGC---TGTCCACTGAGCTATGTACTGTCCATGCGCCTCCTCAGTCCTTGACTTGggatcctgaga---agcaacaacacgctggtgtttttaagccacaaac----tttaggagcagtttgttgcgc-------------ttcca----taaaaactaaagcaATGGCTTACGCC-----------CAGCTAT-CCAGGAATCCTAAAGACCTCAGTG------ATTT----------------------------G---TATGATGCTTAAAAAAT---TGTAAGGTATTTGACCTTGGGTCATTCTCTCCTCAAAGGT------TTCTCTTTTTCTTTT-------TTCCTTTG---AGTAATAAATTATCCCTATAAATACAATTGGTAAAA-ATGCTATAGGATTATTCGTT-------AAGTAAAATG-GGTAAATATTTACCTTAGATTTCAGATTGTTATGAATTTAAGCATAAAAA-----GTATACAT---TTTTTTTTA----AAATGACACATTTTTGTTACTGGAGGTTAGAGTTTTGGGCTCGCTGGTGCTCCTGACCTTCAGCTAAATAT----GCAAGCATACAATCTGTCTCTCGGTGGGTTTGTATCTGTGAGCATCAGAGGAATGCAAACATCAGTAATGTTACCACCAATAAAACTCTACATGATAAAATAC--CCTCTGGTTTTCAGAGGAGCTGCACCAGCTCTAGCCCTGG--AATCCAATGAGCATGTGAAAGCTGGTGTGCACGTGTCAGCGG-------GAGTTCACAAGCCAGTGACAGTACGCTGG-ACAAAAGGATCTCAAGTCTAACCTGAGGCCAGGACGGGCT-----GTCGCAGGCTG--------CTTGTCT---------GGGGTTCTCTCTG-GGTGCAGAGAGGCTGTCAA-AGTGATGTGTCTCTTCTCTTCTCTTTTTGTAAAAACCAA----TTGAC i canFam3.chr1 I 1862 C 0 s dasNov3.JH569188 506933 1265 + 760995 TTGGTACAATGATGGTCC------CTGTTGAATCAATCCTCCTTG-TAGTCCAACCTTTATATA-AAATCCTTCCTTTTAGTTTGGG---TATAAATAAAATG---ATGCCAGTTTTTGTCCTCATCCTTACCAGAC-----------TGACAGCCTCTGCTTTcttgctcttggtagctctgagctgtcatggaa-gtgttccaggtaccc-tgctggggaaatgactcgaaaagaccacatggagagaccatgtggagAGGAGGAGGCCCTAAAAGTACGTGGAGGACAACTGAGAAACCCAGAAGACAGCGAGAATGCAGGAACAAGATCTAGGACTCTAGCTGAGCC--AATCCAGCTTT-CCTACAGCTTGTGC-TA------------------------CCTTCGTGAAAACCCTAGACAGATAAGTGAAGAAACTGCCTTACACATCCAGCTCCCTCCATTTGGGTAGAACActga-----------------gccccgtgttctttctgaattcttgacctgtg-ggattgtgagaagtaacaaaatgattgtactttta----aggcactaaattttggagaagtttatggtgtaccaataca----taata----aaaacCC--------TGCCTTTCATCC----------CTCCTACCCCAGGAATTC-GAGGAGTCCT---------TGTT--------------------------CTT---GATGATTCTTAAAAATTATAAGGAA---ATTTTGCCTTGGGTCACTTTACCCTCAAAAAGATCCTGTATTGTTTTTCTTTCTT-----TTTTTTCAGAAGGTTAAAGTTTACCCATATAAACATAAATGATAAAACATGTTATAAAATT----CTTTTTATGAAAGAATTTTTGGGAAAACATTTTGCTTAGATATTAAAGTGTTTTCAGTTAAAAGGGA--AATAATT-----------TGTTTTTTAGTGCG-----AAAATTTTTGTTTCTGGAGTCTAGCATTTCAATCTTTCTGGTATTCCTGGGGTT----TAACTTT----ATAAACATGTGATGTGTCTCTTGGTGGGTTTGTATCTCCAAGCAGTAAAGGAACCCAAATATCAGTAATGTTATCGCCAATAAAACTCTACATAATAAAACATCTCCCTTATTTTTCAAAGGGACTGCACCAAGTAGAATCCTGGATAAACAAAGAAGCATACGAAGAGTGGTGTCCATTAGTCAACTCGGCCAAAGAGTTCAAAAGTCAACTTGTATACATTGGAAAGTAAATATTTCAAGTTTAAACTGAGGATAGAGAAATTTAAAGTGTCCCAGAAGGGGCTGTCATATATCACTG---GTAGGAGTTCTCCTTGTGGTGAAGAAAAGCTGTTAAGTGTTAAACATTTCTTTTCCTCTC---TTATAAAAGCCAATC--TTTAT i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10924240 3001 - 12073884 I a score=380289.000000 s hg38.chr6_KB021644v2_alt 39188 62 + 185823 TTAGTTCAGCAATGCTTCACTTCA-CTGGGTTCTTCCAAGTTTTGCTGATCTGCCCACGCCAC s panTro5.chr6 173505600 62 + 175400573 TTAGTTCAGCAATGCTTCACTTCA-CTGGGTTCTTCCAAGTTTTGCTGACCTGCCCACGCCAC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171755958 62 + 173848474 TTAGTTCAGCAATGCTTCACTTCA-CTGGGTTCTTCCAAGTTTTGCTGACCTGCCCACGCCAC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11442353 62 - 12463322 TTAGTTCAGCAATGCTTCACTTCA-CTGGGTTCTTCCAAGTTTTGCTGACCTGCCCACGCCAC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156262496 62 + 157873769 CTGGTTCAGCAATGCTTCACTTCA-CTAGGTTCTTCCAAGTTTTGCCGACCTGCCCACGCCGC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170294709 62 + 172585720 TTACTTCGGCAATGATTCACTTCA-CTAGATTCTTCCAAGTTTTGTCGACCTGCCCACGCCGC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169040406 62 - 170955103 TTACTTCGGCAATGATTCACTTCA-CTAGATTCTTCCAAGTTTTATCGACCTGCCCACGCCGC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8327236 62 + 10161646 TTACTTCGGCAATGATTCACTTCA-CTAGATTCTTCCAAGTTTTGTCGACCTGCCCACGTCGC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1356789 62 + 3144229 TTACTTCGGCAATGATTCGCTTCA-CCAGATTCTTCCAAGTTTTGTTGACCTGCCCACGCCGC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96636094 62 + 98384682 TTACTTCGGCAATGATTCGCTTCA-CTAGATTCTTCCAAGTTTTGCTGACCTGCCCAAGCCGC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8180436 62 - 10857215 TTACTTCGGCAATGATTCGCTTCA-CCAGATTCTTCCAAGTTTTGTCGACCTGCCCACGCCGC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15574437 62 - 23502949 TTACTTCGGCAATGATTCGCTTCA-CTAGATTCTTCCAAGTTTTGCCAACCTGCCCAAGCCGC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169839936 40 + 171630274 ----TTCAGCCACGCTCAGCTTTG-ATAGATTCCTCCAAG--------------CCGCA---- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1259095 41 - 2905041 ----TTCAGCCACGCTTGGCTTCACCTAGGTTCCTCCAAG--------------ACACA---- i saiBol1.JH378287 C 0 C 0 s aotNan1.NW_018494782v1 1464841 40 - 1813869 ----TTCAGCCGCGCTTCACTTCG-CCAGATTCCTCCAAG--------------CCACA---- i aotNan1.NW_018494782v1 C 0 C 0 s canFam3.chr1 56144467 62 + 122678785 GTGTGTCAGTTATACATCGCATCA-GTGACTCCTCCAAACCATCGCTAACCTTCCCACACCCC i canFam3.chr1 C 0 I 19 s dasNov3.JH569188 508198 57 + 760995 TTATTTAAGTAAT-----ACATTT-GTATTTTCTCTAAAGTTGCACTAACTTTTTCAAGCCAC i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10924240 3001 - 12073884 I e cebCap1.NW_016107695v1 1215324 41 - 2164891 I a score=1481333.000000 s hg38.chr6_KB021644v2_alt 39250 143 + 185823 CTTCCTGGC--------------------------------------------ACCTGAAAGCACAGTGTTTTATTCCCTTTGGTTAAGTTTTACAATTAAAA-----------------------TTATGAATTAGGAGACGAAATCCTAAGTTCACACCAACTAG-TTTGGGATTGAAACCGAATTCAAAGATTGACCAGGTTTAAGAA s panTro5.chr6 173505662 143 + 175400573 CTTCCTGGC--------------------------------------------ACCTGAAAGCACAGTGTTTTATTCCCTTTGGTCAAGTTTTACAATTAAAA-----------------------TTATGAATTAGGAGACGAAATCCTAAGTTCACACCAACTAG-TTTGGGATTGAAACCGGATTCAACGATTGACCAGGTTTAAGAA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171756020 143 + 173848474 CTTCCTGGC--------------------------------------------ACCTGAAAGCACAGTGTTTTATTCCCTTTGGTCAAGTTTTACAATTAAAA-----------------------TTATGAATTAGGAGACGAAATCCTAAGTTCACACCAACTAG-TTTGGGATTGAAACCGAATTCAAAGATTGACCAGGTTTAAGAA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11442415 143 - 12463322 CTTCCTGGC--------------------------------------------ACCTGAAAGCACAGTGTTTTATTCCCTTTGGTTAAGTTTTACAATTAAAA-----------------------TTATGAATTAGGAGACGAAATCCTAAGTTCACACCAACTAG-TTTGGGATTGAAACCGAATTCAAAGATTGACCAGGTTTAAGAA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156262558 143 + 157873769 CTTCCTGGC--------------------------------------------ACCTGAAAGCACAGTGTTTTATTCCCTTTGGTTAAGTTTTACAATTAAAA-----------------------TTATGAATTAGGAGATGAAATCCTAAGTTCACACCAACTAG-TTTGGGATTGAAACCGGATTCAAAGATTGACCAGGTTTAAGAA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170294771 143 + 172585720 CTTCCTGGC--------------------------------------------ACCTGAAAGCACCGTGTTTTATTCCATTTGGTTAAGTTTTATAATTAAAA-----------------------TTATGAATTAGGAGATGAAATCCTCAGTTCCCACCAACTAG-TTTGGGATTGAAACCGGATTCAAAGATTGATCAGGTTTAAGCA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169040468 143 - 170955103 CTTCCTGGC--------------------------------------------ACCTGAAAGCACCGTGTTTTATTCCATTTGGTTAAGTTTTATAATTAAAA-----------------------TTATGAATTAGGAGATGAAATCCTCAGTTCCCACCAACTAG-TTTGGGATTGAAACCGGATTCAAAGATTGATCAGGTTTAAGCA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8327298 143 + 10161646 CTTCCTGGC--------------------------------------------ACCTGAAAGCACCGTGTTTTATTCCATTTGGTTAAGTTTTATAATTAAAA-----------------------TTATGAATTAGGAGATGAAATCCTCAGTTCACACCAACTAG-TTTGGGATTGAAACCGGATTCAAAGATTGATCAGGTTTAAGCA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1356851 143 + 3144229 CTTCCTGGC--------------------------------------------ACCTGAAAGCACCGTGTTTTATTCCATTTGGTTAACTTTTATAATTAAAA-----------------------TTATGAATTAGGAGATGAAATCCTCAGTTCACACCAACTAG-TTTGGGATTGAAACCGGATTCAAAGATTGATCAGGTTTAAAAA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96636156 143 + 98384682 CTTCCTGGC--------------------------------------------ACCTGAAAGCGCAGTGTTTTATTCCATTTGGTTAAGTTTTATAATTAAAA-----------------------TTATGAATTAGGAGATGAAATCCTAAGTTCACACCAACTAG-TTTGGGATTGAAACCAGATTCAAAGATTGATCAGGTTTAAGCA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8180498 143 - 10857215 CTTCCTGGC--------------------------------------------ACCTGAAAGCACCGTGTTTTATTCCATTTGGTTAACTTTTATAATTAAAA-----------------------TTATGAATTAGGAGATGAAATCCTCAGTTCACACCAACTAG-TTTGGGATTGAAACCGGATTCAAAGATTGATCAGGTTTAAGCA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15574499 143 - 23502949 CTTCCTGTC--------------------------------------------ACCTGAAAGCACAGTGTTTTATTCCATTTGGTTAAGTTTTACAATTAAAA-----------------------TTATGAATTAGGAGATGAAGTCCTAAGTTAACACCAGCTAG-TTTGGGATTGAAACCGGATTCAAAGATGGATCAGGTTTAAGAA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169839976 142 + 171630274 TTTCCCGGC--------------------------------------------ACATGAAAGCCCAGTGTTTTCCTCCTTTTGGTTAAGTTGTATGATTAAAA-----------------------TTATGAATTATGAGATGAAATCCTGGGTTCACACCAACTAG--TTGGGATTGAATCAGAATTCAAAGACTGATCAGGTTGAAGAA i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1259136 142 - 2905041 TTTCCTGGC--------------------------------------------ACATGAAAGCCCAGTGTTTTCTTTCTTTTGGTTAAGTTTTATAATTAAAA-----------------------TTATGAATTACAGGATGAAATCCTGAGTTCACACCAACTAG--TTGGGATTGAAACAGGATTCAAAGACTGATCAGGTGGAAGAA i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1215365 142 - 2164891 TTTCCTGGC--------------------------------------------ACACGAAAGCCCAGTGTTTTCTTCCTTTTGGTTAAGTTTTATGATTAAAA-----------------------TTATGAATTATGAGATGAAATCCTGAGTTCACACCAACTAG--TTGGGATTGAAACAGGATTCAAAGATTGATCAGGTTGAAGAA i cebCap1.NW_016107695v1 I 41 C 0 s aotNan1.NW_018494782v1 1464881 142 - 1813869 TTTCCCGGC--------------------------------------------ACATGGAAGCCCAGTGTTTTCTTCCTTTTGGTTAAGTTTTATGATTAAAA-----------------------TTATGAATTATGAGATGAAATCCTGAGTTCACACCAACTAG--TTGGGATTGAAACAGGATTCAAAGATTGATCAGGTTGAAGAA i aotNan1.NW_018494782v1 C 0 C 0 s canFam3.chr1 56144548 136 + 122678785 ATTTTTTAA--------------------------------------------ACTCAGGAGCCCAG-ATTTTGCTATTTTTGGTGACATTTTAGATTCAGAA-----------------------GTAAGAATTATGAGATGCAATCCTGAGTTCACGTGAGTTAATTTTGAGGTTGAGACAAGAATCACAGATGAATTTG-------AG i canFam3.chr1 I 19 C 0 s dasNov3.JH569188 508255 203 + 760995 TTTCCTGTCTCAAGACTTTAGGGTTTTTTTGTTTTTTTTGTTTTTTGTTTTCAACTTGAAAGTCCAGAGTTTTACTCATTTTGGTTAAGTTTTAGAGCTAGAAAGACTCAAAACAAGAAAGTAGAGTTGTGAATTGTGCCACAAAATCCTGAGTTTAA-------AG-TTTGGAGTTGAAACAAGATTCAAAGATCAACTAAACTCAAGGA i dasNov3.JH569188 C 0 I 24508 e otoGar3.GL873575 10924240 3001 - 12073884 I a score=234477.000000 s hg38.chr6_KB021644v2_alt 39393 34 + 185823 GCTCCAA-CCCCTCTCTGAATTCTTTTTTGATGCA s panTro5.chr6 173505805 34 + 175400573 GCTCCAA-CCCCTCTCTGAATTCTTTTTTGATGCA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171756163 34 + 173848474 GCTCCAA-CCCCTCTCTGAATTCTTTTTTGATGCA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11442558 34 - 12463322 GCTCCAA-CCCCTCTCTGAATTCTTTTTTGATCCA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156262701 34 + 157873769 GCTCCAG-CCCCTCTCTGAATTCTTTTTTGATGCA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170294914 34 + 172585720 ACTCCAA-TCCCTCTCTGGTTTCTTTTTTGATGCA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169040611 34 - 170955103 ACTCCAA-TCCCTCTCTGGTTTCTTTTTTGATGCA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8327441 34 + 10161646 ACTCCAA-TCCCTCTCTGGTTTCTTTTTTGATGCA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1356994 34 + 3144229 ACTCCAA-TCCCTCTCTGGTTTCTTTTTTGATGCA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96636299 34 + 98384682 ACTCCAA-TCCCTCTCTGGTTTATTTTTTGATGCA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8180641 34 - 10857215 ACTCCAA-TCCCGCTCTGGTTTCTTTTTTGATGCA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15574642 34 - 23502949 ACTCCGA-TCCCTCTCTGGTTTCTTTTTGGATGCA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169840118 19 + 171630274 GCTCCAG-CCCCTCTCTGG---------------A i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1259278 19 - 2905041 GCTCCAA-TCCCTCTCTGG---------------A i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1215507 19 - 2164891 GCTCCAA-TCCCTCTCTGG---------------A i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1465023 19 - 1813869 GCTCCAA-TCCCTCTCTGG---------------A i aotNan1.NW_018494782v1 C 0 C 0 s canFam3.chr1 56144684 23 + 122678785 ACTCCAAGTTCCTCTCTGG------------TGCA i canFam3.chr1 C 0 I 5148 e otoGar3.GL873575 10924240 3001 - 12073884 I e dasNov3.JH569188 508458 24508 + 760995 I a score=390113.000000 s hg38.chr6_KB021644v2_alt 39427 39 + 185823 tttttaattgatccataataattgtgcatctttatgggg s panTro5.chr6 173505839 39 + 175400573 tttttaattaatccataataattgtgcatctttatgggg i panTro5.chr6 C 0 C 0 s panPan2.chr6 171756197 39 + 173848474 tttttaattgatccataataattgtgcatctttatgggg i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11442592 39 - 12463322 tttttaattgatccataataattgtgcatctttatgggg i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156262735 39 + 157873769 tttttaatcgatccataataattgtgcatctttatgggg i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170294948 39 + 172585720 tttttaattgatccataataattgtgcatctttatgggg i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169040645 39 - 170955103 tttttaattgatccataataattgtgcatctttatgggg i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8327475 39 + 10161646 tttttaattgatccataataattgtgcatctttatgggg i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1357028 39 + 3144229 tttttaattgatctgtaataattgtgcatctttatgggg i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96636333 39 + 98384682 tttttaattgatccataataattgtgcatctttatgggg i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8180675 39 - 10857215 tttttaattgatccgtaataattgtgcatcttgatgggg i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15574676 39 - 23502949 tttgtaattgatccataataattgtgcatctttgtgggg i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169840137 39 + 171630274 tttttagttaatccataacaattgtgcatctttatgggg i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1259297 39 - 2905041 tttttagttaatccataacaattgcgcgtctttacaggg i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1215526 39 - 2164891 tttttagttaatccaaaacaattgtgcatctttatgggg i cebCap1.NW_016107695v1 C 0 I 48 s aotNan1.NW_018494782v1 1465042 39 - 1813869 tttttagttaatccgtaacaattgcgcatctttatgggg i aotNan1.NW_018494782v1 C 0 I 61 e otoGar3.GL873575 10924240 3001 - 12073884 I e dasNov3.JH569188 508458 24508 + 760995 I e canFam3.chr1 56144707 5148 + 122678785 I a score=313795.000000 s hg38.chr6_KB021644v2_alt 39466 49 + 185823 tacagggtgac-ttctcatacgtgcgtacagtgtgtaatgatcgggtcag s panTro5.chr6 173505878 50 + 175400573 tacagggtgactttctcatatgtgcgtacagtgtataatgatcgggtcag i panTro5.chr6 C 0 C 0 s panPan2.chr6 171756236 50 + 173848474 tacagggtgactttctcatatgtgcgtacagtgtgtaatgatcgggtcag i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11442631 49 - 12463322 tacagggtgac-ttctcatacgtgcgtacagtgtgtaatgatcgggtcag i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156262774 50 + 157873769 tacagggtgactttctcttacgtgcatgcggtgtgtaatgatcgggtcag i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170294987 50 + 172585720 tgcagggcgactttttcatacgtgcatacaatgtgtaataatcgggtcag i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169040684 50 - 170955103 tgcagggcgactttttcatacgtgcatacaatgtgtaataatcgggtcag i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8327514 50 + 10161646 tgcagagcgactttttcatacgtgcatacaatgtgtaataatcgggtcag i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1357067 50 + 3144229 tgcagggcgactttttcatacgtgcatacaatgtgtaataatcgggtcag i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96636372 50 + 98384682 tgcagggcgactttttcgtacgtgcatacaatgtgtaataatcgggtcag i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8180714 50 - 10857215 tgcagggcgactttttcatacgtgcatacaatgtgtaataatcgggtcag i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15574715 50 - 23502949 tgcagggcgacgttctcatacgtgcacacagtgtgtaataatcgggtcag i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169840176 48 + 171630274 -gcagcgtgatgtttccacacatgcatgcaatgtgcattggtcaagcca- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1259336 48 - 2905041 -gcagggtgacatttccacacgtgcatgcagtgtgcagtggtcaagcca- i saiBol1.JH378287 C 0 C 0 e otoGar3.GL873575 10924240 3001 - 12073884 I e aotNan1.NW_018494782v1 1465081 61 - 1813869 I e cebCap1.NW_016107695v1 1215565 48 - 2164891 I e dasNov3.JH569188 508458 24508 + 760995 I e canFam3.chr1 56144707 5148 + 122678785 I a score=88527.000000 s hg38.chr6_KB021644v2_alt 39515 15 + 185823 ggccatctcaaacac s panTro5.chr6 173505928 15 + 175400573 ggccatctcaaacac i panTro5.chr6 C 0 C 0 s panPan2.chr6 171756286 15 + 173848474 ggccatctcaaacac i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11442680 15 - 12463322 ggccatctcaaacac i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156262824 15 + 157873769 ggtcatctcaagtac i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170295037 15 + 172585720 ggtcatctcacgtac i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169040734 15 - 170955103 ggtcatctcacgtac i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8327564 15 + 10161646 ggtcatctcacgtac i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1357117 15 + 3144229 ggtcatctcacgtac i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96636422 15 + 98384682 ggtcatctcaagcac i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8180764 15 - 10857215 ggtcatctcacgtac i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15574765 15 - 23502949 ggtcatctcaagtac i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169840224 15 + 171630274 ggtgacctcagtgac i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1259384 15 - 2905041 cgtgatctcagtgat i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1215613 15 - 2164891 cataatctcagtgac i cebCap1.NW_016107695v1 I 48 C 0 e otoGar3.GL873575 10924240 3001 - 12073884 I e aotNan1.NW_018494782v1 1465081 61 - 1813869 I e dasNov3.JH569188 508458 24508 + 760995 I e canFam3.chr1 56144707 5148 + 122678785 I a score=1161338.000000 s hg38.chr6_KB021644v2_alt 39530 136 + 185823 ctcaaacacttgtcatttcctggtg-ttggtgacatttcagagcttatcttctacctgttttgaaatataaagtaaattattgttagctatagtcaccctactctg-----ctgtcaaatattagaacttattccttctatc s panTro5.chr6 173505943 131 + 175400573 ctcaaacacttgtcatttcctggtg-ttggtgacatttcagagcttatcttctacctgttttgaaata-----taaattattgttagctatagtcaccctactctg-----ctgtcaaatattagaacttattccttctatc i panTro5.chr6 C 0 C 0 s panPan2.chr6 171756301 131 + 173848474 ctcaaacacttgtcatttcctggtg-ttggtgacatttcagagcttatcttctacctgttttgaaata-----taaattattgttagctatagtcaccctactctg-----ctgtcaaatattagaacttattccttctatc i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11442695 136 - 12463322 ctcaaacacttgtcatttcctggtg-ttggcgacatttcagagcttatcttctacctgttttgaaatataaagtaaattattgttagctatagtcaccctactctg-----ctgtcaaatattagaacgtattccttctatc i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156262839 136 + 157873769 ctcaaacacttgtcatttcctggtg-tcggcaacatttcagagcttctcttctacctatttcgaaatataaagtaaattattgttagctatagtcaccctactctg-----ctatcaaatattagaacttattccttctatc i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170295052 136 + 172585720 ctcaaacactggtcattttcttgtg-ttggcaacatcctagagcttctcttctaccagttttgaaatataaagtaaattattcttagctgtagtcaccctactctg-----ctatcaaatattagaacttattccttctatc i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169040749 136 - 170955103 ctcaaacactggtcattttcttgtg-ttggcaacatcctagagcttctcttctaccagttttgaaatataaagtaaattattcttagctgtagtcaccctactctg-----ctatcaaatattagaacttattccttctatc i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8327579 136 + 10161646 ctcaaacgctggtcattttcttgtg-ttggcaacatcctagagcttctcttctaccagttttgaaatataaagtaaattattcttagctgtagtcaccctactctg-----ctatcaaatattagaacttattccttctatc i macNem1.NW_012011000v1 C 0 I 512 s cerAty1.NW_012002071v1 1357132 136 + 3144229 ctcaaacactggtcatttccttgtg-ttggcaacatcttagagcttctcttctaccagttttgaaatataaagtaaattattcttagctgtagtcaccctactctg-----ctatcaaatattagaacttattccttctata i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96636437 136 + 98384682 ttcaaacagtggtcatttccttgtg-ctggcaacatcttagagcttctcttctacctattttgaaatataaagtaaattattcttcgctatagtctccctactctg-----ctatcaaatattagaacgtattccatctatc i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8180779 136 - 10857215 cccaaacactggtcatttccttgtg-ttggcaacatcttagagcttctcttctaccagttttgaaatataaagtaaattattcttagctgtagtcaccctactctg-----ctatcaaatattagaacttattctttctatc i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15574780 133 - 23502949 ctcaaacactggtcacttccttgtg-ttggcaacatcttagagcttctcttctacctattttgaaatataaagtaaattattcttaactatagttaccctactctg-----ctatcaaatattagaacttattc---ctatc i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169840239 134 + 171630274 ctcaaacacttgtcatttccttgcgtttggtaacatttcagagcttctcttctacctattttgaaata-----taaattccggtcagctgcagtcaccctactatgctaccctgtcaaatgttagaacttactc---ctatc i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1259399 131 - 2905041 ctcaaacccttgtcatttccttgtg-ttggtaacatttcagagcttctcttctacctattctgaaata-----taaatcatagtcagctgtactcaccctaccgtg-----ctgtcaaatgttagaactgactccttctatc i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1215628 131 - 2164891 ctcaaacgcttgtcatttccttgtg-ttggtaacatttcagagcttctcttctaccaattttgaaata-----taaattatagctagctatagtcaccctactggg-----ctatcaaatgttagaacttactccttctatc i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1465142 114 - 1813869 ctcaaacacttgtcatttccttgtg-ttggtgacattccagagcttctcttctacctactttgaaata-----taaattatagttag-----------------tg-----ctatcaaatgttagaacttactccttctatc i aotNan1.NW_018494782v1 I 61 C 0 e otoGar3.GL873575 10924240 3001 - 12073884 I e dasNov3.JH569188 508458 24508 + 760995 I e canFam3.chr1 56144707 5148 + 122678785 I a score=797177.000000 s hg38.chr6_KB021644v2_alt 39666 94 + 185823 taaccgtctgtctgtgcccattaagcagcctctcttcccctccctccctgacatccttctcagccactggtaaccagcatttgatgcaccacct s panTro5.chr6 173506074 94 + 175400573 taaccgtctgtctgtgcccattaagcagcctctcttcacctccctccctgacatccttctcagccactggtaaccagcatttgatgcaccacct i panTro5.chr6 C 0 C 0 s panPan2.chr6 171756432 94 + 173848474 taatggtctgtctgtgcccattaagcagcctctcttcatctccctccctgacatccttctcagccactggtaaccagcatttgatgcaccacct i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11442831 94 - 12463322 taatggtctgtctgtgcccattaagcagcctctcttcacctccctccctgacatccttctcagcctctggtaaccagcatttgatgcaccacct i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156262975 94 + 157873769 taacggtctgtctgtgcccattaagcagcctctcttcacctccctccctgacatccttcgcagcctctggtaaccagcatttgaggcacctcct i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170295188 94 + 172585720 taacggtctgtctgtgcccattaaccagcctctcttcacctccctccctgacatccttctcagcctctggtaaccagcagttgatgcaccacct i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169040885 94 - 170955103 taacggtctgtctgtgcccattaaccagcctctcttcacctccctccctgacatccttctcagcctctggtaaccagcagttgatgcaccacct i macFas5.chr4 C 0 C 0 s cerAty1.NW_012002071v1 1357268 94 + 3144229 taacggtctgtctgtgcccattaaccagcctctcttcacctccctccctgacatccttctcagcctctggtaaccagcatttgatgcaccacct i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96636573 94 + 98384682 taacagtctgtctgtgcccaataaccagcctctcttcacctccctccctgacatccttctcagcctctggtaaccagcatttgatgcaccacct i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8180915 94 - 10857215 taacggtctgtctgtgcccattaaccagcctctcttcacctccctccctgacatccttctcagcctctggtaaccagcatttgatgcaccacct i manLeu1.NW_012106474v1 C 0 M 965 s colAng1.NW_012114488v1 15574913 94 - 23502949 taatggtctgtctgtgcccattatccaacctctcttcacctccctccctgacatccttctcagcctctggtaaccagcatttgatgcaccacct i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169840373 93 + 171630274 caac-gtatgtctgtgcccattaaccagcctctcttcacctccgtccctgacacccttctcagcctctggaaaccaccattggacgcaccacgt i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1259530 94 - 2905041 taacagcatgtctgtgccctttaactagcctctcttcacctccctccctgacacccttctcagcctctggaaaccaccacgggatgcaccacgt i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1215759 94 - 2164891 taaccgtatgtctgtgcccgttaaccagcctctcttcacctccctccctgacacccttctcagcctctggaaaccaccactgtatgcaccacgt i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1465256 94 - 1813869 taacggtttgtctgtgcccgttaaccagcctctcttcacctccctccctgacacccttctcagcccctggaaaccaccactggacgcaccacgt i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10924240 3001 - 12073884 I e dasNov3.JH569188 508458 24508 + 760995 I e canFam3.chr1 56144707 5148 + 122678785 I e macNem1.NW_012011000v1 8327715 512 + 10161646 I a score=28104.000000 s hg38.chr6_KB021644v2_alt 39760 6 + 185823 ctgtga s panTro5.chr6 173506168 6 + 175400573 ctgtga i panTro5.chr6 C 0 C 0 s panPan2.chr6 171756526 6 + 173848474 ctgtga i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11442925 6 - 12463322 ctgtga i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156263069 6 + 157873769 ctgtga i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170295282 6 + 172585720 ctgtgg i rheMac8.chr4 C 0 I 315 s macFas5.chr4 169040979 6 - 170955103 ctgtgg i macFas5.chr4 C 0 I 315 s cerAty1.NW_012002071v1 1357362 6 + 3144229 tcgtgg i cerAty1.NW_012002071v1 C 0 I 306 s chlSab2.chr13 96636667 6 + 98384682 ttgtgg i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15575007 6 - 23502949 ccatgg i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169840466 6 + 171630274 ctgagg i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1259624 6 - 2905041 ctgagg i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1215853 6 - 2164891 ctgagg i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1465350 6 - 1813869 atgagg i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10924240 3001 - 12073884 I e dasNov3.JH569188 508458 24508 + 760995 I e canFam3.chr1 56144707 5148 + 122678785 I e manLeu1.NW_012106474v1 8181009 965 - 10857215 M e macNem1.NW_012011000v1 8327715 512 + 10161646 I a score=32934.000000 s hg38.chr6_KB021644v2_alt 39766 5 + 185823 gatcc s panTro5.chr6 173506174 5 + 175400573 gatcc i panTro5.chr6 C 0 C 0 s panPan2.chr6 171756532 5 + 173848474 gatcc i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11442931 5 - 12463322 gatcc i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156263075 5 + 157873769 tatcc i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170295603 5 + 172585720 gatcc i rheMac8.chr4 I 315 C 0 s macFas5.chr4 169041300 5 - 170955103 gatcc i macFas5.chr4 I 315 C 0 s cerAty1.NW_012002071v1 1357674 5 + 3144229 gatcc i cerAty1.NW_012002071v1 I 306 C 0 s chlSab2.chr13 96636673 5 + 98384682 gatcc i chlSab2.chr13 C 0 I 315 s colAng1.NW_012114488v1 15575013 5 - 23502949 gatcc i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169840472 5 + 171630274 gctcc i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1259630 5 - 2905041 gctcc i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1215859 5 - 2164891 gctcc i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1465356 5 - 1813869 gctcc i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10924240 3001 - 12073884 I e dasNov3.JH569188 508458 24508 + 760995 I e canFam3.chr1 56144707 5148 + 122678785 I e manLeu1.NW_012106474v1 8181009 965 - 10857215 M e macNem1.NW_012011000v1 8327715 512 + 10161646 I a score=40638.000000 s hg38.chr6_KB021644v2_alt 39771 5 + 185823 acttt s panTro5.chr6 173506179 5 + 175400573 acttt i panTro5.chr6 C 0 C 0 s panPan2.chr6 171756537 5 + 173848474 acttt i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11442936 5 - 12463322 acttt i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156263080 5 + 157873769 actct i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170295608 5 + 172585720 acttt i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169041305 5 - 170955103 acttt i macFas5.chr4 C 0 C 0 s cerAty1.NW_012002071v1 1357679 5 + 3144229 acttt i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96636993 5 + 98384682 acttt i chlSab2.chr13 I 315 C 0 s colAng1.NW_012114488v1 15575018 5 - 23502949 acttt i colAng1.NW_012114488v1 C 0 I 317 s calJac3.chr4 169840477 5 + 171630274 acttt i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1259635 5 - 2905041 acttt i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1215864 5 - 2164891 acttt i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1465361 5 - 1813869 acttt i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10924240 3001 - 12073884 I e dasNov3.JH569188 508458 24508 + 760995 I e canFam3.chr1 56144707 5148 + 122678785 I e manLeu1.NW_012106474v1 8181009 965 - 10857215 M e macNem1.NW_012011000v1 8327715 512 + 10161646 I a score=38789.000000 s hg38.chr6_KB021644v2_alt 39776 6 + 185823 gtaaac s panTro5.chr6 173506184 6 + 175400573 gtaaac i panTro5.chr6 C 0 C 0 s panPan2.chr6 171756542 6 + 173848474 ttaaac i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11442941 6 - 12463322 ttaaac i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156263085 6 + 157873769 ttaaac i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170295613 6 + 172585720 ttaaac i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169041310 6 - 170955103 ttaaac i macFas5.chr4 C 0 C 0 s cerAty1.NW_012002071v1 1357684 6 + 3144229 ttaaac i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96636998 6 + 98384682 ttaaac i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169840482 6 + 171630274 ttaaac i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1259640 6 - 2905041 ttaaac i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1215869 6 - 2164891 ttaaac i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1465366 6 - 1813869 ttaaac i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10924240 3001 - 12073884 I e dasNov3.JH569188 508458 24508 + 760995 I e colAng1.NW_012114488v1 15575023 317 - 23502949 I e canFam3.chr1 56144707 5148 + 122678785 I e manLeu1.NW_012106474v1 8181009 965 - 10857215 M e macNem1.NW_012011000v1 8327715 512 + 10161646 I a score=189880.000000 s hg38.chr6_KB021644v2_alt 39782 27 + 185823 tcccacgtacgagtgagaacacgcgct s panTro5.chr6 173506190 27 + 175400573 tcccacgtacgagtgagaacacgcgct i panTro5.chr6 C 0 C 0 s panPan2.chr6 171756548 27 + 173848474 tcccacgtacgagtgagaacacgcgct i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11442947 27 - 12463322 tcccacgtacgagtgagaacacgtgct i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156263091 27 + 157873769 tcccgcgtacgagtgagaacatgcgct i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170295619 27 + 172585720 tcccacgtacgagtgagaacatacgct i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169041316 27 - 170955103 tcccacgtacgagtgagaacatacgct i macFas5.chr4 C 0 C 0 s cerAty1.NW_012002071v1 1357690 27 + 3144229 tcccacgtaggagtgagaacatacgct i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96637004 27 + 98384682 tcccatgtaggagtgagaacatggggt i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15575340 27 - 23502949 tcccacgtgtgagtgagaacatacgct i colAng1.NW_012114488v1 I 317 C 0 s calJac3.chr4 169840488 27 + 171630274 tcccacgtacaagtgagaacacgtgct i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1259646 27 - 2905041 tgccacgcaaaagtgagaacacacgct i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1215875 27 - 2164891 tcccatgtacaagtgagaacacacgct i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1465372 27 - 1813869 tcccatgtacgagtgagaacacgcgct i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10924240 3001 - 12073884 I e dasNov3.JH569188 508458 24508 + 760995 I e canFam3.chr1 56144707 5148 + 122678785 I e manLeu1.NW_012106474v1 8181009 965 - 10857215 M e macNem1.NW_012011000v1 8327715 512 + 10161646 I a score=608507.000000 s hg38.chr6_KB021644v2_alt 39809 73 + 185823 gtttgtctttctccacctggtttatttcacttcacatcgtgacctctagttccactcatgttgctgcaagtga s panTro5.chr6 173506217 73 + 175400573 gtttgtctttctccacctggtttatttcacttcacatcatgacctctagttccactcatgttgctgcaagtga i panTro5.chr6 C 0 C 0 s panPan2.chr6 171756575 73 + 173848474 gtttgtctttctccacctggtttatttcacttcacatcatgacctctagttccactcatgttgctgcaagtga i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11442974 73 - 12463322 gtttgtctctctccacctggtttatttcacttcacatcatgacctctagttccactcatgttgctgcaagtga i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156263118 73 + 157873769 gtttgtctttctccgcctggtatatttcacttcacaccatgatctctagttaaacccatgttgctgcaagtca i nomLeu3.chr3 C 0 I 5880 s rheMac8.chr4 170295646 73 + 172585720 gtttgtctttctctgcctggcttatttcacttcacatcgtgacctctagttccactcatgttgctgcgagtga i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169041343 73 - 170955103 gtttgtctttctctgcctggcttatttcacttcacatcgtgacctctagttccactcatgttgctgcgagtga i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8328227 73 + 10161646 gtttgtctttctctgcctggcttatttcacttcacatcgtgacctctagttccactcatgttgctgcgagtga i macNem1.NW_012011000v1 I 512 C 0 s cerAty1.NW_012002071v1 1357717 73 + 3144229 gtttgtctttctctgcctggcttatttcacttcacatcgtgacctctagttccactcatgttgctgcgagtga i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96637031 73 + 98384682 gtttgtctttctctgcctggcttacttcacttcacatcatgacctctagttccactcatgttgctgcgagtga i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15575367 73 - 23502949 gtttgtctttctctgcctggcttatttcacttcacatcgtgacctctagttccactcatgttgctgcgagtga i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169840515 72 + 171630274 attagtctttctctgcctggctta-ttcacttcacgtcatgacctctggttccactcccgttgctgccggtga i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1259673 72 - 2905041 ctttgtctttctctgcctggctta-ttcacttcacataatgacccctagttccactcacgctgctgcaagtga i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1215902 72 - 2164891 atttacctttctttgcctggctta-ttcatttcatgtcatgacctctagttccactcacgttgctgcaagtga i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1465399 72 - 1813869 atttgtctttctctgcctggctta-ttcacttcacgtcatgacctctagttccactcacgttgctgcaagtga i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10924240 3001 - 12073884 I e dasNov3.JH569188 508458 24508 + 760995 I e canFam3.chr1 56144707 5148 + 122678785 I e manLeu1.NW_012106474v1 8181009 965 - 10857215 M a score=2027494.000000 s hg38.chr6_KB021644v2_alt 39882 276 + 185823 caggatttcattctttttagggctgagtagtattccattgtgtctacatatacggcacattttctttatccgtccagcctttgatggacac--tagcttgattcagtatcttggctactgtgagttgtgcagcagtgaccatgggggtgcacat----acctcttccatgtaaccatttcctttcctttgggtatatgcctagcagcgggattgctggatcataggggagttctatttttagcttttcgagaagccgtcatactgttctcattagtggctgt s panTro5.chr6 173506290 276 + 175400573 caggatttcattctttttagggctgagtagtattccattgtgtctacatatatggcacattttctttatccgtccagcctttgatggacac--tagcttgattcagtatctcggctactgtgagttgtgcagcagtgaccatgggggtgcacat----acctcttccatgtaaccatttcctttcctttgggtatatgcctagcagcgggattgctggatcataggggagttctatttttagcttttcgagaagccgtcatactgttctcattagtggctgt i panTro5.chr6 C 0 C 0 s panPan2.chr6 171756648 276 + 173848474 caggatttcattctttttagggctgagtagtattccattgtgtctacatatacggcacattttctttatccgtccagcctttgatggacac--tagcgtgattcagtatcttggctactgtgagttgtgcagcagtgaccatgggggtgcacat----acctcttccatgtaaccatttcctttcctttgggtatatgcctagcagcgggattgctggatcataggggagttctatttttagcttttcgagaagccgtcatactgttctcattagtggctgt i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11443047 276 - 12463322 caggatttcattctttttagggctgagtagtattccattgtgtctacatatacggcacattttctttatccgtccagcctttgatggacac--tagcttgattcagtatcttggctactgtgagttgtgcagcagtgaccatgggggtgcacat----acctcttccatgtaaccatttcctttcctttgggtatatgcctagcagcgggattgctggatcataggggagttctatttttagcttttcgagaagccatcatactgttctcattagtggctgt i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156269071 276 + 157873769 caggatttcattcttttgagggctgagtagtattccattgtgtctacatatacggcacattttctttatccatccagcctttgatggacac--tagcttgattcagtatcttggctactgtgagttgtgcagcagtgaccatgggggtgcacat----atctttccaatgtaaccatttcttttcctttgggtatatgcctagcagcaggattgctggatcataggagagttctatttttagcttttcgagaagacatcatactgttctcattagtggctgt i nomLeu3.chr3 I 5880 C 0 s rheMac8.chr4 170295719 278 + 172585720 caggatttccttgtttttagggctgagtagtatcccggtgtgtctacatatacagcacattttctttatccatccagactttgatggacactttagcttgattcagtatcttggctaccgtgagtcgtgcagcagtgaccataggggcgcccgtt---atctcttccatgtaaccatttcctttcctttcggtatatgcctagcagcaggattgctggatcacaggggagttctagttttagctttttgaaaagccttcgtactcttct-cctagttgctgc i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169041416 278 - 170955103 caggatttccttgtttttagggctgagtagtatcccggtgtgtctacatatacagcacattttctttatccatccagactttgatggacactttagcttgattcagtatcttggctaccgtgagtcgtgcagcagtgaccataggggcgcccgtt---atctcttccatgtaaccatttcctttcctttgggtatatgcctagcagcaggattgctggatcacaggggagttctagttttagctttttgaaaagccttcgtactcttct-cctagttgctgc i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8328300 278 + 10161646 caggatttccttgtttttagggctgagtagtatccccgtgtgtctacatatacagcacattttctttatccatccagactttgatggacactttagcttgattcagtatcttggctaccgtgagtcgtgcagtagtgaccataggggcgcccgtt---atctcttccatgtaaccatttcctttcctttgggtatatgcctagcagcaggattgctggatcacaggggagttctagttttagctttttgaaaagccttcgtactcttct-cctagttgctgc i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1357790 282 + 3144229 caggatttccttgtttttagggctgagtagtatcccggtgtgtctacatacacggcacattttctttatccatccagcctttgatggacactttagcttgattcagtatcttggctaccgtgagttgtgcagcagtggccatgggggcccgtgattacatctcttccatgtaatcatttcctttcctttgggtatatgcctagcagcaggattgctggatcacaggggagttctagttttagctttttgagaagctttggtactcttctccctagtggctgc i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96637104 278 + 98384682 caggatttccttgtttttagggctgagtagtatcccagtgtgtctacatatacagcacattttctttatccctccagcctttgatggacactttagcttgattcagtatcttggctaccatgagtcatgcagcagtgaccatgggggcgcccctt---atctcttccatgtaacaatttcctttcctttgggtatatacctagcagcgggattgctggatcacaggggagttctacttttagctttttgtgaagccttcatactcttct-cctagttgctgc i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15575440 278 - 23502949 caggatttccttgtttttagggctgagtagtatcccagtgtgtctacatatatggcacattttctttatccatccagcctttgatggacactttagcttgattcagtatcttggctaccatgagtcgtgcagcagtgaccatgggggcgcccgtt---atctcttccatgtaaccatttcctcccctttgggtgtatgcctagcagcaggattgctggatcacaggggagttctagttttagctttttgagaagcttt-gtactcttctccttagtggctgc i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169840587 277 + 171630274 caggatttcattctttttagggctgagtcgtattctgctgtgtctacaaacacagcacgttttctttatccgttgagcgtttgctgcaccctttgggttgattcggtgtcatggctattgtgagtcgtgcggcagtggacgcgggggtgcacgt----ctgcattccacgtgaccagctcccttcctctgggtgtgcgccttgcagc-ggattgctggatcatagggtggttctgtttctggctgttggagaagccttcatgctgttctccgtggtggctgt i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1259745 272 - 2905041 cgggatttcattccttttacggct--gtcatattctgctgtgtctacatatacagcacattttctttacccgttgagcgtttgatggagcctttaggttgattcggtatcttggctattaggagtcgtgtggcagtgaacgcgggggtgcacgt----gtgtgttccatgtaaccacctcctttcctctgggtacacgcctagcagt-ggattgctggatcctagggtggttctgattttggctgttggagg---cttcctgctgctctccacagtggctgc i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1215974 276 - 2164891 cgggatttcatactttttatggctgagtcgtattccgc-gtgtctatatatacagcacattttctctatccgttgagcctttgatgcaccctttaggttgatttggtatcttggctattgtgagtcgtgctgcagtgaacgcgggggagcacgt----agctgttccatgtaaccacctcctttcctctgggtatacgcctagcagt-ggattgctggatcctaggttggttctgattttggccgttggagaagacttcatgctgttctccatagtggctgt i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1465471 277 - 1813869 cgggatttcactctttttatggctgagtcgtattccgctgtgtcaacatacacagcacattttctttatccgttgagcctttgatggaccctttaggttgattcggtatcttggctattgtgagttgtgcgtcagtgaacgcgggggtgcacgt----atctgttccatgtaaccacctcctttcctctgggtatacgcccagcagt-ggattgctggatcatagggtggtcctggttttggctgctggagaagccttcatgctgttctccgtgggggctgt i aotNan1.NW_018494782v1 C 0 I 60 e otoGar3.GL873575 10924240 3001 - 12073884 I e dasNov3.JH569188 508458 24508 + 760995 I e canFam3.chr1 56144707 5148 + 122678785 I e manLeu1.NW_012106474v1 8181009 965 - 10857215 M a score=361324.000000 s hg38.chr6_KB021644v2_alt 40158 70 + 185823 gctaacttacattcccagcaacagtatatgagagttccct--------------------------------------------gttctcccca--------------tctttgccagcatttgttat s panTro5.chr6 173506566 70 + 175400573 gctaacttacgttcccagcaacagtatatgagagttccct--------------------------------------------gttctccgca--------------tctttgccagcatttgttat i panTro5.chr6 C 0 C 0 s panPan2.chr6 171756924 70 + 173848474 gctaacttacgttcccagcaacagtatatgagagttccct--------------------------------------------gttctccgca--------------tctttgccagaatttgttat i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11443323 70 - 12463322 actaacttacattcccagcaacagtatatgagagttccct--------------------------------------------gttctccgca--------------tctttgccagcatttgttat i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156269347 70 + 157873769 actaacttacattcccagcagcagtatatgagagttccct--------------------------------------------gttctccaca--------------tctttgccagcatttgttat i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170295997 70 + 172585720 actaacttacattcccagagacagtatatgagagctccct--------------------------------------------gttctccgca--------------tctttgccagcatttgttat i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169041694 70 - 170955103 actaacttacattcccagagacagtatatgagagctccct--------------------------------------------gttctccgca--------------tctttgccagcatttgttat i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8328578 70 + 10161646 actaacttacattcccagagacagtatatgagagctccct--------------------------------------------gttctccgca--------------tctttgccagcatttgttat i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1358072 70 + 3144229 gctaacttccattcccagagacagtatatgagagctccct--------------------------------------------gttctctgca--------------tctttgccagcatttgttat i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96637382 70 + 98384682 actaacttccattcccagagacagtatatgagagcaccct--------------------------------------------gttctccaca--------------tctttgccagcatttgttat i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15575718 70 - 23502949 actaacttccattcccagagacagtatataagagctccct--------------------------------------------gttctcagca--------------tctttgccagcatttgttat i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169840864 118 + 171630274 ----actgacgtgcccggcagcagggtgtgag---tggctgctggagaagccttcatgctgttctccgtggtggctgtactgacgtgcccggcagcagggtgtgaggccctttgcccgcacctat--- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1260017 61 - 2905041 ----actgacatgcccaacagcggtgtgggag---cccct---------------------------------------------tgccccgca--------------cctgtgccggcatttgtta- i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1216250 61 - 2164891 ----actgacatgcccaacagcactgtatggg---tccct---------------------------------------------ttccccaca--------------cctgtgtcagcatttgtta- i cebCap1.NW_016107695v1 C 0 C 0 e otoGar3.GL873575 10924240 3001 - 12073884 I e aotNan1.NW_018494782v1 1465748 60 - 1813869 I e dasNov3.JH569188 508458 24508 + 760995 I e canFam3.chr1 56144707 5148 + 122678785 I e manLeu1.NW_012106474v1 8181009 965 - 10857215 M a score=1172506.000000 s hg38.chr6_KB021644v2_alt 40228 153 + 185823 ttttttgtcttttggataacaggcattcgaac----tggggtgagacgatgtcgcactgtggttttgatgacatcgagcatttctttgtagacttttttggccatttgtatgtcttctcttgagaaatgtttattcagatactttggtcatttttag s panTro5.chr6 173506636 153 + 175400573 ttttttgtcttttggataacaggcattcgaac----tggggtgagacgatgtcgcactgtggttttgatgacatcgagtgtttcttcgtagacttttttggccatttgtatgtcttctcttgagaaatgtttgttcagatacttcggtcatttttaa i panTro5.chr6 C 0 C 0 s panPan2.chr6 171756994 153 + 173848474 ttttttgtcttttggataacaggcattcgaac----tggggtgagacgatgtcgcactgtggttttgatgacatcgagtgtttcttcatagacttttttggccatttgtatgtcttctcttgagaaatgtttgttcagatacttcggtcatttttaa i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11443393 153 - 12463322 ttttttgtcttttggataacaggcattcgaac----tggggtgagacgatgtcactctgtggttttgatgacatcgagcatttcttcgtagacttttttggccatttgtatgtcttctcttgagaaatgtttattcagatacttcggtcatttttaa i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156269417 157 + 157873769 ttttttgtcttttggataacaggcatccgaaccgggtggggtgagatgatgtcgcactgtggttttgatgacattgagcatttcttcgtagacttttttggccatttgtatgtcttctcttgagaaatgtttactcagatactttggtcatttttaa i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170296067 153 + 172585720 ctttttgtcttttggataatagtcatcctaac----tggggtgagacgatgtcgcactgtggttttgatgacatcgagcatttcttcatagactttttgggccatttgtatgtcttctcttgagaaatgtttcttcagatactttggtcatttttaa i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169041764 153 - 170955103 ctttttgtcttttggataatagtcatcctaac----tggggtgagacgatgtcgcactgtggttttgatgacatcgagcatttcttcatagactttttgggccatttgtatgtcttctcttgagaaatgtttcttcagatactttggtcatttttaa i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8328648 153 + 10161646 ctttttgtcttttggataatagtcatcctaac----tggggtgagacgatgtcgcactgtggttttgatgacatcgagcatttcttcatagactttttgggccatttgtatgtcttctcttgagaaatgtttcttcagatactttggtcatttttaa i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1358142 153 + 3144229 ctttttgtcttttggataatagtcatcctaac----tggggtgacacgatgtcgcactgtggttttgatgacatcgagcatttcttcatagacttcttgggccatttgtatgtcttctcttgagaaatgtttcttcagatactttggtcattttaaa i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96637452 147 + 98384682 c-ttttgtcttttggataatagtcatcctaac----tggggtgagacaatgtcgcactgtggttttg-----atcgagcatttcttcatagactttttgggccatttgtgtgtcttctcttgagaaatgtttcttcagatactttggtcatttttaa i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15575788 153 - 23502949 ctttttgtcttttggataatagtcatcctaac----tggggtgagacgatgtcgcactgtggttttgatgacatcgagcatttcttcatagactttttgggccatttgtatgtcttctcttgagaaatgtttcttcagatactttggtcattgttaa i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169840982 131 + 171630274 ---------------------gtcatcctaac----cagggtgagctgatgtcgccctgtggttttggtgacgtggagcattcctctgt-gacttctttggccatttctatgtcttcgtctgagaaatgtgtactcggataccttgacgatttttag i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1260078 152 - 2905041 ctttttgtcttttggataatagtcgtcctaac----cagggtgagatgatgtcgcccggtggttttgatgacatggagcatttctctgt-gacttctttggccatttgtatgtcttcgtttgagaaatgtttactcagatagtttgatcatttttaa i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1216311 152 - 2164891 ctttttgtcttttggataatagtcatcccaac----aagggtgagatgatgccgtcctgtgggtttgatgacgtggagcatttctctgt-gacttctttagccatttgtatgtctttgtctgagaagtgtttactcagatactttgatcagttttaa i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1465808 152 - 1813869 ttttttgtcatttggataatggtcatcctaac----cagggtgagatgatgtcgccctgcgggttcgatgacgtggaacatttctctgt-gacttctttggtcatttgtgtgtcttcgtttgagaaatgtttactcagatattttgatcgtttttaa i aotNan1.NW_018494782v1 I 60 C 0 e otoGar3.GL873575 10924240 3001 - 12073884 I e dasNov3.JH569188 508458 24508 + 760995 I e canFam3.chr1 56144707 5148 + 122678785 I e manLeu1.NW_012106474v1 8181009 965 - 10857215 M a score=11275531.000000 s hg38.chr6_KB021644v2_alt 40381 1270 + 185823 atcaattttgtgtttt---gtcgttgtcattgttgctgctgttcagtggtttgagttccttgtatattctggatattagtccctcgtcagaagaatattttctcttattctagaagttgtcttttcactctgttgatag-tttcctttgctgtgcatatgattttagttcaatataactcccatttgtctatttt-----ttgttttgttgcctgtgcttttgaagttttggcaaataaatgtttgcctcgacagatatcctgaagaatttctcctatgttttcttctatcagtttccc-gttttaggtcttacattgaagtatttaatctgctttggctgtatttttgtggatggtgagagac-ggggtctagttttgttctcttgcacatgaatatccagttttcccagcaccatttattggagagactgccctttcccattgttcgttcttggtgcctctgttgaagaagagttgctataaacacagaga-----tttacttttgggttctctattctattggtctatgtgtctgtttttatattgatacta---tttgctgGTAGAat------gc--att------ttttttc-tatttaacttcataataatgctataaagtagatgctgttatctctgtattaaagataagaaatatga-gtcctgagaggttgtgcctcggtcagtcatgtgggttagggccagactctggctggggctgtttca-ccctaaagccatgcttgtctttccCACAATGTGAAGACTGAAGGTTCTGTTGAGAAAATATTGTGAGAATTTTAAACATGTGGAGACACTGATCTAAAAACAATAGGACCAGTAGGAACAC-TTTCCTCTAGTGGAAGAAGATAAACAACAAATTCAGAAACTCAAGGGTACCATGACGAAAATACGTAAGAGTGACATGAGAGTAACTCAGAGTGCAGTGTGGGGTGAGGGCAGGACCGAGTCATCAAGACTCttagagaagagctctctgaaagggtgcctttggaatggaaatctgattaatagagaagcggctgtgagaaggtctgaaggtggatcttcccaagggggaggaataatttatgcaactgctctgaggcaagCTTGTGTACTGAAAGCCTTCATCAGCTTTCTCTAGTTATGCTCTTTGCAGCT----------GAAAT-AATCTGAAAGTATCCCCTGTCCAGAACACAGCCCTGTCTAGAGTCACTCAAGAAAGGGGCCTCAGAACCGTTGTGGCGCTTCAGCCTCCAGTC-TCATGGATGCAGTTGATCACCACCATCACCACCAGCCCA s panTro5.chr6 173506789 1271 + 175400573 atcaattttgtgtttt---gtcgttgtcgttgttgctgctgttcagtggtttgagttccttgtatattctggatattagtcccttgtcagaagaatattttctcttattctagaagttgtcttttcactctgttgatag-tttcctttgctgtgcatatgattttagttcaatataactcccatttgtctatttt-----tggttttgttgcctgtgcttttgaagttttggcaaataaatgtttgcctcgacagatgtcctgaggaatttctcctatgttttcttctatcagtttctc-gttttaggtcttacattgaagtatttaatctgctttgggtgtatttttgtggatggtgagagac-ggggtctagttttgttctcttgcacatgaatatccagttctcccagcaccatttattggagagactgccctttcccattgtttgttcttggtgcctctgttgaagaagtattgctataaacacagaga-----tttacttttgggttctctattctattggtctatgtgtctgtttttatattgatacta---tttgctgGTAGAat------gc--att------ttttttcgtatttaacttcataataatgctataaagtagatgctgttatctctgtattaaagataagaaatatga-gtcctgagaggttgtgcctcagtcagtcatgtgggttagggccagactctggctggggctgtttca-ccctaaagccatgcttgtccttcccacAATGTGAAGACTGAAGGTTCTGTTGAGAAAATATTGTGAGAATTTTAAACATGTGGAGACACTGATCTAAAAACAATAGGACCAGTAGGAACAC-TTTCCtctagtggaagaagataaacaacaaattcagaaactcaagggtaccatgaagaaaatacgtaagagtgacatgagagtaactcagagtgcagtgtggggtgagggcaggaccgagtcatcaagactcttagagaagagctctctgagagggtgcctttggaatgaaaatctgattaatagagaagcggctgtgacaaggtctgaaggcggatcttcccaagggggaggaataatttatacaactgctctgaggcaagCTTGTGTACTGAAAGCCTTCATCAGCTTTCTCCAGTTATGCTCTTTGCAGCT----------GAAAT-AATCTGAAAGTATCCCCTGTCCAGAACACAGCCCTGTCTAGAGTCACTCAAGAAAGGGGCCTCAGAACCGTTGTGGCGCTTTAGTCTCCAGTC-TCATGGATGCAGTTGATCACCACCATCACCACCAGCCCA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171757147 1271 + 173848474 atcaattttgtgtttt---gtcgttgtcgttgttgctgctgttcagtggtttgagttccttgtatattctggatattagtcccttgtcagaagaatattttcccttattctagaagttgtcttttcactctgttgatag-tttcctttgctgtgcatatgattttagttcaatataactcccatttgtctatttt-----tggttttgttgcctgtgcttttgaagttttggcaaataaatgtttgcctcgacagatgtcctgaggaatttctcctatgttttcttctatcagtttctc-gttttaggtcttacattgaagtatttaatctgctttgggtgtatttttgtggatggtgagagac-ggggtctagttttgttctcttgcacatgaatatccagttttcccagcaccatttattggagagactgccctttcccattgtttgttcttggtgcctctgttgaagaagagttgctataaacacagaga-----tttacttttgggttctctattctattggtctatgtgtctgtttttatattgatacta---tttgctgGTAGAAT------GC--ATT------TTttttcctatttaacttcattataatgctataaagtagatgctgttatctctgtattaaagataagaaatatga-gtcctgagaggttgtgcctcggtcagtcatgtgggttagggccagactctggctggggctgtttca-ccctaaagccatgcttgtccttcccacAATGTGAAGACTGAAGGTTCTGTTGAGAAAATATTGTGAGAATTTTAAACATGTGGAGACACTGATCTAAAAACAATAGGACCAGTAGGAACAC-TTTCCTCTAGTGGAAGAAGATAAACAACAAATTCAGAAACTCAAGGGTACCATGAAGAAAATACGTAAGAGTGACATGAGAGTAACTCAGAGTGCAGTGTGGGGTGAGGGCAGGACCGAGTCATCAAGACTCttagacaagagctctctgagagggtgcctttggaatgaaaatctgattaatagagaagcggctgtcagaaggcctgaaggcggatcttcccaagggggaggaataatttatgcaactgctctgaggcaagCTTGTGTACTGAAAGCCTTCATCAGCTTTCTCCAGTTATGCTCTTTGCAGCT----------GAAAT-AATCTGAAAGTATCCCCTGTCCAGAACACAGCCCTGTCTAGAGTCACTCAAGAAAGGGGCCTCAGAACCATTGTGGCGCTTTAGTCTCCAGTC-TCATGGATGCAGTTGATCACCACCATCACCACCAGCCCA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11443546 1278 - 12463322 atcaattttgtgtttt---gtcgttgttgttgttgttgctgttcagtggtttgagctccttgtatattctggatattagtcccttgccagaagaatattttctctcattctagaagttgtcttttcactctgttgatag-tttcctttgctgtgcatatgattttggttcaatataactcccatttgtctatttt-----tggttttgttgcctgtgcttttgaagttttggcaaataaatgtttgcctcgacagatgtcctgaagaatttctcctatgttttcttctatcagtttccc-gttttaggtcttacattgaagtatttaatctgctttgggtgtatttttgtggatggggagagacaggggtctagttttgttctcttgcacatgaatatccagttttcccagcaccatttattggagagactgccctttcccattgttcgttcttggtgcctctgttgaagaagagttgctataaacacagaga-----tttacttttgggttctctattctattggtctatgtgtctgttttcatactgatactattctttgctggtAGAAT------GCATATT------TTTTTTTCTatttaacttcataataatgctgtgaagtagatgctgttatctctgtattaaagataagaaatatgaggtcctgagaggttgtgcctcggtcagtcatgtgggttagggccagactctggctggggctgtttca-ccctaaagccatgcttgtccttcccacAATGTGAAGACTGAAGGTTCTGTTGAGAAAATATTGTGAGAATTTTAAACATGTGGAGACAATGATCTAAAAACAATAGGACCAGTAGGAACAC-TTTCCTCTAGTGGAAGAAGATAAACAACATTTTCAGAAACTCAAGGGTACCATGAAGAAAATACGTAAGAGTGACATGAGAGTAACTCAGAGTGCAGTGTGGGGTGAGGGCAGGACCGAGTCATCAAGACTCttagagaagagctctctgagagggtgcctttggaatgaaaatctgattaatagagaagcggctgtgagaaggtctgaaggcggatcttcccaagggggaggaataatttatgcaactgctctgaggcaagCTTGTGTACTGAAAGCCTTCATCAGCTTTCTCCAGTTATGCTCTTTGCAGCT----------GAAAT-AATCTGAAAGTATCCCCTGTCCAGAACACAGCCCTGTCTAGAGTCACTCAAGAAAGGGGCCTCAGAACCGTTGTGGCGCTTTAGCCTCCAGTC-TCATGGATGCAGTTGATCACCACCATCACCAGCAGCCCA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156269574 1275 + 157873769 atcaattttgtgttttgtcgtcgttgttgttgttgttgctgttcagttgtttgagttctttgtgta-tctggatattagtcccttgtcagaagaacattttccctcattctagagcttgtctttttactctgttgatag-tttcctttgctgtgcatatgattttagttcaatataactcccatttgtctatttt-----tggttttgttgcctgtgcttttgaagttttggcaaataaatatttgcctcagctgatgtcctgaagaatttctcctatgttttcttctatcagtttccc-gttttaggtcttacattgaagtatttaatctgctttgggtgtatctttgtggatggtgagagacaggggtctagtttcattctcttgcacatgaatatccagttttctcagcaccatttattggagagactgccctttcccattgtttgttcttggtgcctttgttgaagaagagttgctataaacacagaga-----tttacttatgggttctctattctattggtctatgtgtctgtttttatattgatgctattctttgctggtAGAAt------gc--ata------ttttttc-tatttaacttcataataatggtattaagtggatgctgttatccctgtattaaagataagaa--atga-gtcctgagaggtcgtgcctcggtcagtcatgtgggttagggccagactctggctggggctgtttca-ccctaaagtcatgcttgtccttcccacAATGTGAAGACTGAAGGTTCTGTTGATAAAATATTGTGAGAATTTTAAACATGTGGAGACACTGATCTAAAAACAATAGGACCAGTAGGAACAC-TTTCCTCTAGTGGAAGAAGATAAACAACAAATTCAGAAACTCAGGGGTACCATGAAGAAAATACGTAAAAGTGACATGAGAGTAAGTCAGAGTGCAGTAGGGGGTGAGGGCAGGACCAAGTCATCAAGACTCttagagaagggctctctgagagggtgactttggaatgaaaatctgattaatagagaagcagctgtgagaaggtctgaaggcggatcttccccagggggaggaataatttatgcaactgctctggggcaagCTTGTGTACTGAAAGCCTTCATCAGCTTTCTCCAGTTATGCTCTTTGCAGCT----------GAAATAAACCTGAAAGTATCCCCTGTCCAGAACACAGCCCTGTCTAGAGTCACTCAAGAAAGGGGCCTCAGAACAGTTGTGGCACTTTAGCCTCCAGTC-TCATGGATGCAATTGATCACCACCATCACCACCAGCCCA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170296220 1273 + 172585720 atcaattgtgtgtttt---gtcgttg---ttggtgttgctgttcagttgtttgagttccttgtatattctggatattagtcccttgtcagaagaatattttcttgcattccggaagttgtcttttcactctgttgatag-tttcctttgctgtgcatatgatttgagttcgatat-actcccatttgtctatttt-----tgcttttgttgcctgtgcttttgaagttttggaaaataaatatttgcctagactgatggcctgaagcatttctcctatgttttcttctatcattttccc-gttttaggtcttacagtgaagtgtttaatctgctttgggtttatttctgtggagggtgagagacaggggactagtttcgttctctggcacatgaatatccagttttcccagcagcgtttattggagagactgtcctttcccactgtttgttcttggtacctttgttgaagaagacttgccataaacccagaga-----tttacttttgggttctctattctgttggtctatgtgtctgtttttatattgatactattctttgctggtAGAat------gc--a-----ttttttttttctatttaacttcataataatgctattacgtggatgctgttatccctgtactaaagataagaaatatga-gccctgagaggtcgtgactcgctcagtcatgtgggttagggccagactctggctggggctgtctca-ccctaaagccatgctcgtcccTCCCACAATGTGAAGACTGAAGTTTCTATTGATAAAATATTGTGAGAATTTTAAACATGTGGAGACACTGATCTAAACACAATAGGACCAGTAGGAACAC-GTTCCtctagtggaagaagataaacaacaaattcagaaattcaggagtaccatgaagcaaatacataagagtggcatgagagaaactcagagtgcagtgtggagtgagggcaggaccga---atcaagactcttagagaagggctctctgagagggtgactttggaatgaaaatctgattcacggagaagcagctctgaga---tctgaaggcggatcttctcaagggggaggagtaatccatgcaactgctctgaggcaagCTTCTGTACCCAAAACCTTCATCAGCTTTCTCCAGTTATGCTCTTTGCAGCTCTTTGCAGCTGAAATAAATCTGAAAGTATCCCCTGTCCAGAACACAGCCCTGTCTAGAGTCATTCAAGAAAGGGGCCTCAGAACCGCTGTGGCGCTTTAGCCTCTGGTCGTTGTGGATGCAATTGATCACCACCATCACCA-----CCA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169041917 1277 - 170955103 atcaattgtgtgtttt---gtcgttg---ttggtgttgctgttcagttgtttgagttccttgtatattctggatattagtcccttgtcagaagaatattttctcgcattccggaagttgtcttttcactctgttgatag-tttcctttgctgtgcatatgatttgagttcgatat-actcccatttgtctatttt-----tgcttttgttgcctgtgcttttgaagttttggaaaataaatatttgcctagactgatggcctgaagcatttctcctatgttttcttctatcattttccc-gttttaggtcttacagtgaagtgtttaatctgctttgggtttatttctgtggagggtgagagacaggggactagtttcgttctctggcacatgaatatccagttttcccagcagcgtttattggagagactgtcctttcccactgtttgttcttggtacctttgttgaagaagacttgccataaacccagaga-----tttacttttgggttctctattctgttggtctatgtgtctgtttttatattgatactattctttgctggtAGAAT------GC--ATG-TTTTTTTTTTTTCTatttaacttcataataatgctattacgtggatgctgttatccctgtactaaagataagaaatatga-gccctgagaggtcgtgactcgctcagtcatgtgggttagggccagactctggctggggctgtctca-ccctaaagccatgctcgtcccTCCCACAATGTGAAGACTGAAGTTTCTATTGATAAAATATTGTGAGAATTTTAAACATGTGGAGACACTGATCTAAACACAATAGGACCAGTAGGAACAC-GTTCCTCTAGTGGAAGAAGATAAACAACAAATTCAGAAATTCAGGAGTACCATGAAGCAAATACATAAGAGTGGCATGAGAGAAACTCAGAGTGCAGTGTGGAGTGAGGGCAGGACCGA---ATCAAGACTCttagagaagggctctctgagagggtgactttggaatgaaaatctgattcacggagaagcggctctgaga---tctgaaggcggatcttctcaagggggaggagtaatccatgcaactgctctgaggcaagCTTCTGTACCCAAAACCTTCATCAGCTTTCTCCAGTTATGCTCTTTGCAGCTCTTTGCAGCTGAAATAAATCTGAAAGTATCCCCTGTCCAGAACACAGCCCTGTCTAGAGTCATTCAAGAAAGGGGCCTCAGAACCGCTGTGGCGCTTTAGCCTCTGGTCGTTGTGGATGCAATTGATCACCACCGTCACCA-----CCA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8328801 1276 + 10161646 atcaattgtgtgtttt---gtcgttg---ttggtgttgctgttcagttgtttgagttccttgtatattctggatattagtcccttgtcagaagaatattttctcgcattccggaagttgtcttttcactctgttgatag-tttcctttgctgtgcatatgatttgagttcgatat-actcccatttgtctatttt-----tgcttttgttgcctgtgcttttgaagttttggaaaataaatatttgcctagactgatggcctgaagcatttctcctatgttttcttctatcattttccc-gttttaggtcttacagtgaagtgtttaatctgctttgggtttatttctgtggagggtgagagacaggggactagtttcgttctctggcacatgaatatccagttttcccagcagcgtttattggagagactgtcctttcccactgtttgttcttggtacctttgttgaagaagacttgccataaacccagaga-----tttacttttgggttctctattctgttggtctatgtgtctgtttttatattgatactattctttgctggtAGAAT------GC--ATG--TTTTTTTTTTTCTatttaacttcataataatgctattacgtggatgctgttatccctgtactaaagataagaaatatga-gccctgagaggtcgtgactcgctcagtcatgtgggttagggccagactctggctggggctgtctca-ccctaaagccatgctcgtcccTCCCACAATGTGAAGACTGAAGTTTCTATTGATAAAATATTGTGAGAATTTTAAACATGTGGAGACACTGATCTAAACACAATAGGACCAGTAGGAACAC-GTTCCTCTAGTGGAAGAAGATAAACAACAAATTCAGAAATTCAGGAGTACCATGAAGCAAATACATAAGAGTGGCATGAGAGAAACTCAGAGTGCAGTGTGGAGTGAGGGCAGGACCGA---ATCAAGACTCTTAGAGAAGGGCTCTCTGAGAGGGTGACTTTGGAATGAAAATCTGATTCACGGAGAAGTGGCTCTGAGA---TCTGAAGGCGGATCTTCTCAAGGGGGAGGAGTAATCCATGCAACTGCTCTGAGGCAAGCTTCTGTACCCAAAACCTTCATCAGCTTTCTCCAGTTATGCTCTTTGCAGCTCTTTGCAGCTGAAATAAATCTGAAAGTATCCCCTGTCCAGAACACAGCCCTGTCTAGAGTCATTCAAGAAAGGGGCCTCAGAACCGTTGTGGCGCTTTAGCCTCTGGTCGTTGTGGATGCAATTGATCACCACCGTCACCA-----CCA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1358295 1279 + 3144229 atcaattgtgtgtttt---gtcgttg---ttggtgttgctgttcagttgtttgagttccttgtatattctggatattagtcccttgtcagaagaatattttctctcattccggaagttgtcttttcactctcttgatagttttcctttgctgtgcatatgatttgagttcggtat-actcccatttgtctatttt-----tgcttttgttgcctgtgcttttgaagttttggaaaataaatatttgcctagactgatggcctgaagcatttctcctatgttttcttctatcattttccc-attttaggtcttacagtgaagtatttaatctgctttgggtttatttctgtggagggtgagagacagggatctagtttcgttctctggcatatgaatatccagttttcccagcagcgtttattggagagactgtcctttcccactgcttgttcttggtacctttgttgaagaagacttgccataaacccagaga-----tttacttttgggttctctattctgtgggtctatgtgtctgtttttatattgatactattctttgctggtAGAAT------GC--ATGTTTTTTTTTTTTTCTatttaacttcataataatgctattacgtggatgctgttatccctgtactaaagataagaaatatga-gtcctgagaggtcgtgactcgctcagtcatgtgggttagggccagactctgactggggctgtctca-ccctaaagacatgctcgtcccTCCCACAATGTGAAGACTGAAGTTTCTATTGATAAAATATTGTGAGAATTTTAAACATGTGGAGACACTGATCTAAACACAATAGGACCAGTAGGAACAC-GTTCCTCTAGTGGAAGAAGATAAACAACAAATTCAGAAATTCAGGGGTACCATGAAGCAAATACATAAGAGTGGTATGAGAGAAACTCAGAGTGCAGTGTGGAGTGAGGGCAGGACCGA---ATCAAGACTCttagagaagggctctctgagagggtgactttggaatgaaaatctgattcatggagaagtggctgtgaga---tctgaaggcggatcttctcaagggggaggagtaatccatgcaactgctctgaggcaagCTTGAGTACGGAAAACCTTCATCAGCTTTCTCCAGTTATGCTCTTTGCAGCTCTTTGCAGCTGAAATAAATCTGAAAGTATCCCCTGTCCAGAACACAGCCCTGTCTAGAGTCATTCAAGAAAGCGGCTTCAGAACCGATGTGGCGCTTTAGCCTCTGGTCGTTGTGGATGCAGTTGATCACCACCGTCACCA-----CCA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96637599 1276 + 98384682 atcaattttgtgtttt---gtcgttg---ttggtgttgttgttcagttgtttgagttccttgtatattctagatattagtcccttgtcagaagaatattttctctcattccagaagttgtcttttcactctgttgatagttttcctttgctgtgcatatgatttgagttcaatat-actcccatttgtgtatttt-----tgcttttgttgcctgtgcttttgaagttttggaaaataaatatttgcctagactgatggcctgaagcatttctcctatgttttcttctatcattttccc-gttttaggtcttacactgaagtatttaatctgctttgggtgtatttttgtggagggtgagagacaggggtctagtttcgttctctggcacatgaatatccagttttcccagcagcgtttattggagagactgtcctttcccactgtttgttcttggtacctttgttgaagaagatttgccataaacccagaga-----tttac-tttgggttctctattctgttggtctatgtgtctgtttttatactgatactattctttgctggtAGAAT------GC--ATG--ATTTTTttttcctatttaacttcataataatgctattacgtggatgctgttacccgtgtactaaagataagacatatga-gtcctgagaggtcgtgcctagctcagtcatgtgggttagggccagactctggctggggctgtctca-ccctaaagccatgctcgtcccTCCCACAATGTGAAGACTGAAGTTTCTATTGATAAAATATTGTGAGAATTTTAAACATGTGGAGACACTGATCTAAACACAATAGGACCAGTAGGAACAC-GTTCCTCTAGTGGAAGAAGATAAACAACGAATTCAGAAATTCAGGGGTACCATGAAGCAAATACATAAGAGTGACTTGAGAGAAACTCAGAGTGCAGTGTGGAGTGAGGGCAGGACCGA---ATCAAGACTCttagagaagggctctctgagagggtgactttggaatgaaaatctgattcatggagaagtggctgtgaga---tctgaaggtggatcttctcaagggggaggagtaatccatgcaactgctctgaggcaagCTTGTGTACCGAAAACCTTCATCAGCTTTCTCCAGTTATGCTCTTTGCAGCTCTTTGCAGCCGAAATAAATCTGAAAGTATCCCCTGTCCAGAACACAGCCCTGTCTAGAGTCATTCAAGAAAGGGGCCTCAGAACCGACGTGGCGCTTTAGCCTCTGGTCGTTGTGGATGCAATTGATCACCACTGTCACCA-----CCA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8181980 1283 - 10857215 ATCAATTGTGTGTTTT---GTCGTTG---TTGGTGttgctgttcagttgtttgagttccttgtatattctggatattagtcccttgtcagaagaatattttctctcattccggaagttgtcttttcactctcttgatagttttcctttgctgtgcatatgatttgagttcaatat-actcccatttgtctatttt-----tgcttttgttgcctgtgcttttgaagttttggaaaataaatatttgcctagacggatggcctgaagcatttctcctatgttttcttctatcattttccc-gttttaggtcttacagtgaagtgtttaatctgctttgggtttatttctgtggagggtgagagacagggatctcgtttcgttctctggcacatcaatatccagttttcccagcagcgtttcttggagagactgtcctttcccactgtttgttcttggtacctttgttgaagaagacttgccattaacccagagatttattttat-tttgggttctctattctgttggtctatgtgtctgtttttatattgatactattctttgctggtAGAAT------GC--ATG-TTTTTTTTTTTTCTatttaacttcataataatgctattatgtggatgctgttatccctgtactaaagataagaaatatga-gtcctgagaggtcatgactcgctcagtcatgtgggttagggccagactctgactggggctgtctcacccctaaagccatgctcgtcccTCCCACAATGTGAAGACTGAAGTTTCTATTGATAAAATATTGTGAGAATTTTAAACATGTGGAGACACTGATCTAAACACAATAGGACCAGTAGGAACAC-GTTCCTCTAGTGGAAGAAGATAAACAACAAATTCAGAAATTCAGGGGTACCATGAAGCAAATACATAAGAGTGGCATGAGAGAAACTCAGAGTGCAGTGTGGAGTGAGGGCAGGACCGA---ATCAAGACTCttagagaagggctctctgagagggtgactttggaatgaaaatctgattcatggagaagcggctgtgaga---tctgaaggcggatcttctcaaggaggaggagtaatccatgcaactgctctgaggcaagCTTGAGTACCGAAAACCTTCATCAGCTTTCTCCAGTTATGCTCTTTGCAGCTCTTTGCAGCTGAAATAAATCTGAAAGTATCCCCTGTCCAGAACACAGCCCTGTCTAGAGTCATTCAAGAAAGGGGCTTCAGAACCGATGTGGCGCTTTAGCCTCTGGTCGTTGTGGATGCAATTGATCACCACCGTCACCA-----CCA i manLeu1.NW_012106474v1 M 965 C 0 s colAng1.NW_012114488v1 15575941 1281 - 23502949 atcaattttgtgtttt---gtcattg---ttggtgttgccgttcagttgtttgagttccttgtatattctggatatcagtccctcgtcagaagaatattttctctcattccagaagttgtcttttcactctgttgatag-tttcctctgctgtgcatatgatttgagttccatat-actcccatttgtctatttt-----tgcttttgttgcctgtgattttgaagttttggaaaataaatatttgcctagactgatggcctgaagcatttctcctatgttttcttctatcattttccc-gttttaggtcttacattgaagtatttaatctgctttgggtttatttttgtggagggtgagagacaggggtctagtttcgttctcttgcacatgaatatccagttttcccagcagcgtttataggagagactgtcctttcccattgtttgttcttggtacctttgttgaagaagacttgctataaacccagaga-----tttgtttttgggttctcagttctgttggtctatgtgtctgtttttatattgatactattctttgctggtGGAAT------GC--ATGTTTGTTTTtttttttatttaacttcataataatgctattacgtggatgctgttatccctgtattaaagataacaaatatga-gtcctgagaggtcgtgcctcactcaatcatgtgggttagggccagactctggctggggatgtctca-ccctaaagccatgctcgtcccTCCCACAATGTGAAGACTGAAGTTTCTATTGATAAAACATTGTGAGAATTTTAAACATGTGGAGACACTGATCTAAACGCAATAGGACCAGTAGGAACAG-GTTCCtctagtggaagaagataaacaacaaattcagaaattcaggggtaccatgaagaaaatacataagagtggcatgagagaaactcagagtgcagtgtggggtgagcgcaggaccgaatcatcaagactgttagagaagggctctctgagagggtgactttggaatgaaaatctggttcatggagaagcggctgtgaga---tctgaaggcggatcttctcaagggggaggagtaatccatgcaaccactctgaggcaagCTTGTGTACCGAAAACCTTCATCAGCTTTCTTCAGTTATGCTCTTTGCAGCTCTTTGCAGCTGAAACAAATCTGAAAGTATCCCCTGTCCAGAACACAGCCCTGTCTAGAGTCATTCAAGAAAGGGGCCTCAGAACCGTTGTGGCGCTTTAGCCTCTGGTCGTTGTGGATGCAATTGATCACCACTGTCACCA-----CCA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169841113 1261 + 171630274 ttcaactttgtgtttt---gtcg------ttgccgttcctgttcaggtgtttgagctcctcatagagtcgggatgttaattccttgtcagaagaatattttctcccattctagaagttctctcttcactctcttgacgg-tttcctttgctgtgcatgagactgtagtttcatat-actcccatttgtctattttggggtgtttttttttgcctatacttttgaagtttagtcaaataaatttttgcctagaccaatgtcctggagcatttctcctgtgttttgttccagctgcttcccagtctcaggt-ttacactgacgtgttgaacctgctttgggtttatttctgccaatggcaagagacagggatgtactttcattctgctgcacacgaacacccggttttcccagcgtcgtttactggggagaccgtcctttcccgctgtttgtacttggtgtgttt-----------gttgctctaaacgcatggg-----tttacttttgggttctctgttctgctgatccatgtgtctgtttttatgtcgatagtgttatttGCTGGTAGAATAGAAAAGA--A-A------TTCATTTCTatttaacttcccaataacactataaagtagatgctattgttctcgtattagagataagaaatttca-gcccctagagaTGGTGCCTCGGTCAGTCATGTGGGTTAGGGCCAGACTCTGGGTAGGGCTGTTTCA-CCCAAAAGTGAGGCTTGTCCTGCCCACAATGTGAAGACGGAAGATTTCATTGATAAAATACTGTGAGAATTCTATACCTGTGGGGACGCTGATCTAAAAGCGATAGGACCAGTAGGAGCTC-TTTCTTCTAGTGGAAGAAAATGAACAACAAATTCAGAAACTCAGGGATACCATGAAGGAAATACGGAAGCCTGACATGAGAGAAAGCCAGAGCGCAGTGTGGGCGGAGGGCAGGGCCCAGTCATCAAGACTCttagagaagggctctctgcgagggcgactttggtgtgaaaatctgctgaatgaagaaacggctgcgagcagttctgaaggcagatcttccccagggggaggaatgattcctgcagctgctctgagacgagCTTG-GTACCGAAGGCCTTCG-CCGCTCTCTGCAGTTACGCTCTTGGCAGCT----------GAAGTAACTTTGAAAGTATCCCCTGTCCAGAACACAGCCCTGTCTAGAGTCATTTAAGAAA-GGGCCTCAGCACGGTGGTGGCACTGCAGCCTCTGGTCCTTGCGGCTGCAATCGATCACCACCATCACCA-----CCG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1260230 1257 - 2905041 ttcaattttgtgtttt---gtca------ctgttgctcctgttcagttgtttgagttcctggtagagtctggatgttaatcccttgtcagaagaatattttctcccattctag-agttgtcttttcactctgtcagtgg-tttcctttgctgtgcgtgagactgtagtttcatac-acccccatttgtctatttc--tttttttttttttgcctatgcttttgaagttttggcaaacaaatatttgcctagaccaatgtcctgaagcatttctcctatattttattccagctgtttcc--gtttcaggt-ttacattgaagtatttaatctgc-ttgggtttatttttgtgaatggcaagagacagcgacctactttcattctctcgcacatgaatacccggttttcccagcgtcatttattggagagactgtcctttcacactgcttgtacttggtgtctttgttgagcaagagttgctataaatgcatgga-----tttgcttttgggttctctattctgctgatctatgtgtctattcttatatcgatactatTATTTGCTGGTAGAAT------GA--A-T------TTTTTTTCTATTTAACTTCCTAATAACACTATCAAGTGGATGCTATTACTCTCGTATTAAAGATAAGAAATTTCA-GCCCTTAGATATGGTGCCTCAGTCAGCCATGTGGGTTACGGTCAGACTCTGGGTAGGCCTGGTTCA-CCCAAAAGTGATGCTTGTCCCTCCCACGATGTGAACACTGAAGATTTTATTGATACAATGCTGTGAGAATTTTAAACATGTAGAGACGCTGATCTAAGAGTGACAGGACCAGTAGGAACTC-TTTCTTCTAGTGGAAGAAAATGAACAAC---TTCAGAAACTCGGCGAtaccatgaagaaaatacataagcgtgacatgagagaaagccagagcatggtgtgggctgagggcaggcccgagtcatcaagactctc-gagaagggctctctgagagggccactttggcatgaaaatctgctgaatgaagaaacggctgtgagaagctctgaaggcagatctt-cccaaggggaggagaaattcacacaactgctccgagacaggCTTGCGTACTGAAAGTCTTCA-CGACTCTCTCCAGTTATGCTCTTTGCAGCT----------GAAATAAATCTGAAAGTGTCTCCTGTCCAGAACACAGCCCTGTCTAGAGTCATTTAAGAAAGGGGCCTCAGCACCGTGGTGACGCTGTAGCCTCTGGTCCTTGCGGATGCAATCGATCACCACCATCACCA-----CCA i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1216463 1233 - 2164891 ttcaattttgtgtttt---gcca------ttgctgttcctgttcagttgtttgagttccttgt--actctgaatgttaatcccttgtcagaagaatattttctcccatcctagaagttgtcttttcactctgttgacag-tttcctttgctgtgcatgagactgtagtttcatat-actcccatttgtctatttt--------tttttttgcctatgcttttgaagttttggcaaaaaaatatttgcctagaccaatgtcctgaagcatttctcctatgttttgttccagctgtttcccagtttcaggt-ttacattgaagaatttaatctgctttgggtttatttttgtgaatagcaagagacagggatctactttcattctcttgcacatgaatacccgattatcccaggatcatttattggagagactgtcttttcccattgtttgtacttggtgtctttgttgaacaagagttgctataaatgcatgga-----tttacttttgggttctctattctgttgatctatgtgtctgtttttatatcgatactatTATTTGCTGGTAGAAT------GA--ATT------TTTTTTTCTATTTAACTTCCTAATAACACTATCAAGTAGATGGTATTACTCTCATATTAATGATAAGAAATTTCA-GCCCTTAGAGATGGTGCCTCGGTCAGTCATGTGGGTTAGGGTCAGACTCTGGGTAGGGCTGTTTCA-CCCAAAAGTGATGCTTGTCCCTCCCACAATGTGAAGACTGAAGATTTTATTGATAAAATATTGTGAGAATTTTAAA--TGTGGCGATGCTGATCTAAAAGCAACAGGACCAGTAGGAAC-----TCTTCTAGTGGAAGAAAATGAACAACTAATTTAGAAACTCAGGGATACCATGAAGAAAATATGTAAACGTGACATGAGAGAAAG-CAGAGCACGGTGTGGGCTAAGGGCAGGACCGAGTCATCAGGACTCttagagaagggctctctgagagggcggctttggcatgaaaatctgctgaatgaagaaacggctgtgagaagttctgaaggcagatcttcccaagggggaggaataattcatgcaactgctctgaCACAAGCTTGTGTAC-GAAAGCCTTCA-CAGCTTTCTCCAGTTATGCTCT----------------------------TGAAAGTATCCCCTGTCCAGAACACAGCCCCATCTAGAGTCATTTAAGAAAGGGGCCTCAGCACCGTGGTGGCACTGTAGCCTCTGGTCCTTGTGGATGCAATCGATCACCACCATCACCA-----TCA i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1465960 1252 - 1813869 ttcaattttctgtttt---gtcg------ttgccgttcctgttcagttgttcgagttcctggtagagtctggctgttaatcccttgtcagaagagtcttttccccccttctggaagctgtctttgcactccgttggtgg-tttcctttgctgtgcatgaga-tgtagtttcatat-actcccatttgtctttttt-----ttttttttttgcctatgctgttgaagttttggcaaataaatatttgcctagaccaatgtcctgaagcatttctcctatgttttgttccagctgtttcccagtttcaggt-ttccactgaagcatttaatctgctttgggtttattttcgtgaatggcaagagtcagggatctacttt-gttctcttgcacgtgaatacccgcttttcccagcatcatttatcggagagactggcctttcccattgcttgtacttggtgtcttt-ttgaacaagagctgctgtaaatgcatgga-----tttacttctgtgttctctattctgttgatctatgtgtctgtttttatatcgatactatTATTTGCTGGTAGAAT------GA--ATT------TTTTTTTCTatttaacttcctaataacactaccaagtagatgctattactctcatattaaagacaagaaatttca-gccctgagagatGGTGCCTCGGTCAGTCGTGTGGGTTAGGGTCAGACTCTGGGTAGGGCTGTTTCA-CCCAAAAGTGAAGCTTGTCCCTCCCACAACGTGAAGACTGAAGATTTTATTGATAAAATACTGTGAGAATTTTAAACATGTGGAGACGCTGATCTAAAAGTGATAGGACCAGTAGGAACTCTTTTCTTCTAGTAGAAGAAAATGAACAACAAATTCAGAAACTCAGGGATACC---------ATACATAAGCGTGACATGAGAGAAAGCCAGAGCGCGGTGTGGGCTGAGGGCAGGACCGAGTCATCAAGACTCttagagaagggctctctgagagggcgactttggcaggaaaatctgctgaatgaagaaatggctatgaggagttctgaaggcagatcctcccaagggggaggaataattcatgcaactgctctgagacaagCTTGGGTACTGAAAGCCTTCA-CAGCTTTCTCCAGTTATGCTGTTTGCAGCT----------GAAACAAATCTGAAAGTATCCCCTGTCCAGAACACAGCCCTGTCTAGAGTCATTTAAGAAAGGGGCCTCAGCACCGTGGTGGCGCCGTAGCCTCTGGTCCTTGTGGATGCAACCGATCA-CACCATCACCA-----CCA i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10924240 3001 - 12073884 I e dasNov3.JH569188 508458 24508 + 760995 I e canFam3.chr1 56144707 5148 + 122678785 I a score=282007.000000 s hg38.chr6_KB021644v2_alt 41651 26 + 185823 GCGGAGGTCAGTCCTTCCCCAGGGCT s panTro5.chr6 173508060 26 + 175400573 GCGGAGGTCAGTCCTTCCCCAGGGCT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171758418 26 + 173848474 GCGGAGGTCAGTCCTTCCCCAGGGCT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11444824 26 - 12463322 GCGGAGGTCAGTCCTTCCCCAGGGCT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156270849 26 + 157873769 GTGGAGGTCAGTCCTTCCCCAGGGCT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170297493 26 + 172585720 GCAGAGGTCAGTCCTTCCCCAGGGCT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169043194 26 - 170955103 GCAGAGGTCAGTCCTTCCCCAGGGCT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8330077 26 + 10161646 GCAGAGGTCAGTCCTTCCCCAGGGCT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1359574 26 + 3144229 GCAGAGGTCAGTCCTTCCCCAGGGCT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96638875 26 + 98384682 GCAGAGGTCAGTCCTTCCCCAGGGCT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8183263 26 - 10857215 GCAGAGGTCAGTCCTTCCCCAGGGCT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15577222 26 - 23502949 GCAGAGGTCAGTCCTTCTCCAGGGCT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169842374 26 + 171630274 GCAGATGTCAGTCCTTCCCCAGGGCT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1261487 26 - 2905041 GCAGACGTCAGTCCTTCCCCCGGGCT i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1217696 26 - 2164891 GCAGATGTCAGTCCTTCCCCAGGGCT i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1467212 26 - 1813869 GCAGACGTCAGTCCTTCCCCAGGGCT i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10927241 22 - 12073884 GTGAAAGTCTGTCCCTTTCT----CC i otoGar3.GL873575 I 3001 C 0 e dasNov3.JH569188 508458 24508 + 760995 I e canFam3.chr1 56144707 5148 + 122678785 I a score=56177.000000 s hg38.chr6_KB021644v2_alt 41677 5 + 185823 TTTCA- s panTro5.chr6 173508086 5 + 175400573 TTTCA- i panTro5.chr6 C 0 C 0 s panPan2.chr6 171758444 5 + 173848474 TTTCA- i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11444850 5 - 12463322 TTTCA- i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156270875 5 + 157873769 TTTCA- i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170297519 5 + 172585720 TTTCA- i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169043220 5 - 170955103 TTTCA- i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8330103 5 + 10161646 TTTCA- i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1359600 5 + 3144229 TTTCA- i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96638901 5 + 98384682 TTTCA- i chlSab2.chr13 C 0 I 2831 s manLeu1.NW_012106474v1 8183289 5 - 10857215 TTTCA- i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15577248 5 - 23502949 TTTCA- i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169842400 5 + 171630274 TTTCA- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1261513 5 - 2905041 TTTCA- i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1217722 5 - 2164891 TTTCA- i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1467238 5 - 1813869 TGTCA- i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10927263 5 - 12073884 TCTCA- i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56149855 5 + 122678785 -TTCAA i canFam3.chr1 I 5148 C 0 e dasNov3.JH569188 508458 24508 + 760995 I a score=13600.000000 s hg38.chr6_KB021644v2_alt 41682 1 + 185823 G s panTro5.chr6 173508091 1 + 175400573 G i panTro5.chr6 C 0 C 0 s panPan2.chr6 171758449 1 + 173848474 G i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11444855 1 - 12463322 G i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156270880 1 + 157873769 G i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170297524 1 + 172585720 G i rheMac8.chr4 C 0 I 2823 s macFas5.chr4 169043225 1 - 170955103 G i macFas5.chr4 C 0 I 2847 s macNem1.NW_012011000v1 8330108 1 + 10161646 G i macNem1.NW_012011000v1 C 0 I 2841 s cerAty1.NW_012002071v1 1359605 1 + 3144229 G i cerAty1.NW_012002071v1 C 0 I 2916 s manLeu1.NW_012106474v1 8183294 1 - 10857215 G i manLeu1.NW_012106474v1 C 0 I 2868 s colAng1.NW_012114488v1 15577253 1 - 23502949 G i colAng1.NW_012114488v1 C 0 I 3116 s calJac3.chr4 169842405 1 + 171630274 G i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1261518 1 - 2905041 G i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1217727 1 - 2164891 G i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1467243 1 - 1813869 G i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10927268 1 - 12073884 G i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56149860 1 + 122678785 G i canFam3.chr1 C 0 C 0 e dasNov3.JH569188 508458 24508 + 760995 I e chlSab2.chr13 96638906 2831 + 98384682 I a score=17100.000000 s hg38.chr6_KB021644v2_alt 41683 1 + 185823 G s panTro5.chr6 173508092 1 + 175400573 G i panTro5.chr6 C 0 C 0 s panPan2.chr6 171758450 1 + 173848474 G i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11444856 1 - 12463322 G i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156270881 1 + 157873769 G i nomLeu3.chr3 C 0 I 2627 s rheMac8.chr4 170300348 1 + 172585720 G i rheMac8.chr4 I 2823 C 0 s macFas5.chr4 169046073 1 - 170955103 G i macFas5.chr4 I 2847 C 0 s macNem1.NW_012011000v1 8332950 1 + 10161646 G i macNem1.NW_012011000v1 I 2841 C 0 s cerAty1.NW_012002071v1 1362522 1 + 3144229 G i cerAty1.NW_012002071v1 I 2916 C 0 s chlSab2.chr13 96641737 1 + 98384682 G i chlSab2.chr13 I 2831 C 0 s manLeu1.NW_012106474v1 8186163 1 - 10857215 G i manLeu1.NW_012106474v1 I 2868 C 0 s colAng1.NW_012114488v1 15580370 1 - 23502949 G i colAng1.NW_012114488v1 I 3116 C 0 s calJac3.chr4 169842406 1 + 171630274 G i calJac3.chr4 C 0 I 4162 s saiBol1.JH378287 1261519 1 - 2905041 G i saiBol1.JH378287 C 0 I 3117 s cebCap1.NW_016107695v1 1217728 1 - 2164891 G i cebCap1.NW_016107695v1 C 0 I 3828 s aotNan1.NW_018494782v1 1467244 1 - 1813869 G i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10927269 1 - 12073884 G i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56149861 1 + 122678785 G i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 532966 1 + 760995 G i dasNov3.JH569188 I 24508 C 0 a score=13923.000000 s hg38.chr6_KB021644v2_alt 41684 1 + 185823 T s panTro5.chr6 173508093 1 + 175400573 T i panTro5.chr6 C 0 C 0 s panPan2.chr6 171758451 1 + 173848474 T i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11444857 1 - 12463322 T i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156273509 1 + 157873769 T i nomLeu3.chr3 I 2627 C 0 s rheMac8.chr4 170300349 1 + 172585720 T i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169046074 1 - 170955103 T i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8332951 1 + 10161646 T i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1362523 1 + 3144229 T i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96641738 1 + 98384682 T i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8186164 1 - 10857215 T i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15580371 1 - 23502949 T i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169846569 1 + 171630274 T i calJac3.chr4 I 4162 C 0 s saiBol1.JH378287 1264637 1 - 2905041 T i saiBol1.JH378287 I 3117 C 0 s cebCap1.NW_016107695v1 1221557 1 - 2164891 T i cebCap1.NW_016107695v1 I 3828 C 0 s aotNan1.NW_018494782v1 1467245 1 - 1813869 T i aotNan1.NW_018494782v1 C 0 I 4778 s canFam3.chr1 56149862 1 + 122678785 T i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 532967 1 + 760995 T i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10927270 0 - 12073884 C a score=132574.000000 s hg38.chr6_KB021644v2_alt 41685 13 + 185823 GTTTCTGGCAGCA s panTro5.chr6 173508094 13 + 175400573 GTTTTTGGCAGCA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171758452 13 + 173848474 GTTTTTGGCAGCA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11444858 13 - 12463322 GTTTCTGGCAGCG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156273510 13 + 157873769 GTTTCGGGCAGCA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170300350 13 + 172585720 GTTTCGGGCAGCA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169046075 13 - 170955103 GTTTCGGGCAGCA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8332952 13 + 10161646 GTTTCGGGCAGCA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1362524 13 + 3144229 GTTTCGGACAGCA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96641739 13 + 98384682 GTTTCGGGCAGCA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8186165 13 - 10857215 GTTTCGGGCAGCA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15580372 13 - 23502949 GTTTCGGGCAGCA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169846570 13 + 171630274 GTTTCAGGCGGCA i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1264638 13 - 2905041 GTTTCAGGCAGCG i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1221558 13 - 2164891 GTTTCAGGCGGCA i cebCap1.NW_016107695v1 C 0 C 0 s otoGar3.GL873575 10927270 4 - 12073884 ---------AGCA i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56149863 13 + 122678785 GTTTCAACCAGCA i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 532968 13 + 760995 ATTTCAAGCAGCA i dasNov3.JH569188 C 0 C 0 e aotNan1.NW_018494782v1 1467246 4778 - 1813869 I a score=2083106.000000 s hg38.chr6_KB021644v2_alt 41698 226 + 185823 CCTGTCATGTGCTCTGCACACCCTGATGCTGTAT-GTT-TGTGTGTGCGTATCCACA--------------------CCATGCAATCACGCAATGAACAGGAACACAGTTTACATT-------AAGATTTCCC----------------------------TGGAGCT----------------CAGCACTGT-GAGGGTTGGGAGCGAGCACCGTGGCTCGATGCCTTA-TC-AGGGTGGTTGCACATC--TGCGCTAGAACAGAATTCTGCAGGCCTCAAAGTCTAT------TAAAAAATCAAAGGA s panTro5.chr6 173508107 227 + 175400573 CCTGTCATGTGCTCTGCACACCCTGATGCTGTAT-GTT-TGTGTGTGCCTATCCACA--------------------CCATGCAATCACGCACTGAACAGGAACACAGTTTACATT-------AAGATTTCCC----------------------------TGGAGCT----------------CAGCACTGT-GAGGGTTGGGAGCGAGCACCGTGGCTCGATGCCTTA-TC-AGGGTGGTTGCACATC--TGCACTAGAACAGAATTCTGCAGGCCTCAAAGTCTATA-----AAAAAAATCAAAGGA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171758465 227 + 173848474 CCTGTCATGTGCTCTGCACACCCTGATGCTGTAT-GTT-TGTGTGTGCCTATCCACA--------------------CCATGCAATCACGCACTGAACAGGAACACAGTTTACATT-------AAGATTTCCC----------------------------TGGAGCT----------------CAGCACTGT-GAGGGTTGGGAGCGAGCACCGTGGCTCGATGCCTTA-TC-AGGGTGGTTGCACATC--TGCGCTAGAACAGAATTCTGCAGGCCTCAAAGTCTATA-----AAAAAAATCAAAGGA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11444871 226 - 12463322 CCTGTCACGTGCTCTGCACACCCTGATGCTGTAC-GTT-TGTGTGTGCGTATCCACA--------------------CCATGCAGTCACGCACTGAACAGGAACACAGTTTACATT-------AAGATTTTCC----------------------------TGGAGCT----------------CAGCACTGT-GAGGGTTGGGAGTGAGCACTGTGGCTCGATGCCTTA-TC-AGGGTGGTTGCACATC--TGCGCTAGAACAGAATTCTGCAGGCCTCAAAGTCTAT------TAAAAAATCAAAGGA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156273523 227 + 157873769 CCTGTCATGTGCTCTGCACACCCTGGTGCTGTAT-GTT-TGCGTGTGCGTATCCACA--------------------CCATGCAATCATGCACTGAACAGGGACACAGTTTCCGTT-------AAGATTTCCG----------------------------TGGGGCT----------------CAGCACTGT-GAGGGTCAGGGGCGAGCACCGTGGCTCGAGGCCTTA-TC-AGGGTGGTTGCACATC--TGCGCTGGAACAGAAGTCTGCAGGCCTCAAAGTCTATT-----AAAAAAATCAAAGGA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170300363 228 + 172585720 CCTGTCATGTGCTCTGCACACCCTGATACTGTAT-GTT-TGTGTGTGCGTATCCACA--------------------CCACGCAATCACACACTGAACAGGAACGCAGTTTACGTT-------AAGATTTTTG----------------------------TGGAGCT----------------CAGCACTAT-GAGGGTTGGGAGCCAGCACTGTGGCTCAACGCCTTG-TC-AGGGTGGTTGCACATC--TGTGCTAGAACAGAATGCTGTGGGCCTCAAAGTCTATT----AAAAAAAATCAAAGCA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169046088 228 - 170955103 CCTGTCATGTGCTCTGCACACCCTGATACTGTAT-GTT-TGTGTGTGCGTATCCACA--------------------CCACGCAATCACACACTGAACAGGAACGCAGTTTACGTT-------AAGATTTTTG----------------------------TGGAGCT----------------CAGCACTAT-GAGGGTTGGGAGCCAGCACCGTGGCTCAACGCCTTG-TC-AGGGTGGTTGCACATC--TGTGCTAGAACAGAATGCTGTGGGCCTCAAAGTCTATT----AAAAAAAATCAAAGCA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8332965 228 + 10161646 CCTGTCATGTGCTCTGCACACCCTGATACTGTAT-GTT-TGTGTGTGCGTATCCACA--------------------CCACGCAATCACACACTGAACAGGAACGCAGTTTACGTT-------AAGATTTTTG----------------------------TGGAGCT----------------CAGCACTAT-GAGGGTTGGGAGCCAGCACCGTGGCTCAACGCCTTG-TC-AGGGTGGTTGCACATC--TGTGCTAGAACAGAATGCTGTGGGCCTCAAAGTCTATT----AAAAAAAATCAAAGCA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1362537 228 + 3144229 CCTGTCATGTGCTCTGCACACCCTGATACTGTAT-GTT-TGTGTGTGCGTATCCACA--------------------CCACGCAATCACGCACTGAACAGGAACACAGTTTACGTT-------AAGATTTCCA----------------------------TGGAGCT----------------CAGCACTAT-GAGGGTTGGGAGCCAGCACCGTGGCTCAACGCCTTG-TC-AGGGTGGTTGCACATC--TGTGCTAGAACAGAATGCTGCGGGCCTCAAAGTCTATT----AAAAAAAATCAAAGCA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96641752 228 + 98384682 CCTGTCAGGTGCTCTGCACACCCTGATACTGTAT-GTT-TGTGTGTGCGTATCCACA--------------------CCACGCAATCATGCACTGAACAGGAACACAGTTTACGTT-------AAGATTTCCC----------------------------TGGAGCT----------------CAGCACTAT-GAGGGTTGGGAGCCAGCACCGTGGCTCAACGCCTTG-TC-AGGGTGGTTGCACATC--TGTGCTAGAACAGAATGCTGCGGGCCTCAAAGTCTATT----AAAAAAAATCAAAGCA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8186178 228 - 10857215 CCTGTCATGTGCTCTGCACACCCTGATACTGTAT-GTT-TGTGTGTGCGTATCCACA--------------------CCACGCAATCACGCACTGAACAGGAACACAGTTTACGTT-------AAGATTTCCA----------------------------TGGAGCT----------------CAGCACTAT-GAGGGTTGGGAGCCAGCACCGTGGCTCGACGCCTTG-TC-AGGGTGGTTGCACATC--TGTGCTAGAACAGAATGCTGCGGGCCTCAAAGTCTATT----AAAAAAAATCAAAGCA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15580385 214 - 23502949 CCTGTCATGTGCTGTGCACACCCTGATACTGTAT-GTT-TGTGTGTGCGTATCCACA--------------------CCACGCAATCACGCACTGAACAGGAACACAGTTTACGTT-------AAGATTTCCG----------------------------TGGAGCT----------------CAGCACTGT-GAGGGTTGGGAGCCAGCA-------------CCTTG-TC-AGGGTGGTTGCACATC--TGTGCTAGAACAGAATGCTGCGGGCCTCAAAGTCTATT-----AAAAAAATCAAAGCA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169846583 244 + 171630274 CCTGTCATGTGCTCTGCACACCCTGATGCTGTAT-GTT-TGTGTGTGCGTGTCTACAGcacacagtcacacacagtcacacacagtcacacacTGCACAGGAACACGGTTGACTTC-------AGGAACTCCA----------------------------TGCAGCT----------------CAGCACTGT-CGGGATCGGGAGCGA--ACCACGACAT-GTGCCTTG-TC--GGGTGTCTGCACATCAAAGCGCTCGAACAGAATTCTGCAGGCCTCAAAGGGTAT------AAAAAAATCAAAGGA i calJac3.chr4 C 0 I 11 s saiBol1.JH378287 1264651 217 - 2905041 TCTGTCATGTGCTCTGCACACCCTGATGCTGTAT-GTT-TGTGTGTGGGCGTCCACA--------------------CCACACAGTCACACACTGGACAGGAACACTGTTGACCTC-------AAGAACTCCG----------------------------TGGAGCT----------------CAGCACTGT-CGGGATCGGGAGCGAG-ACTCCGGCGCGGTGCCTT--------GTGGCTGCACATC--TGTGCTCTAACAGAATTCTGCAGGCCTCAAAGTGAAT--------AAAAATCAAAGGA i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1221571 221 - 2164891 CCTGTCATGTGCTCTGCACACCCTGATGCTGTAT-GTT-TGTGTGTGCGTGCCCGCA--------------------CCACACAATCACACACTGGACAGGAACACGGTTCACTTC-------AAGAACTCCG----------------------------TGGAGCT----------------CAGCACTGT-CAGGATCAGGAGCGAG-ACCCCGGCGCGGCGCCTTG-TC--GGGTGGCTGCACATC--TGC-CTCGAACAGATTTCTGCAGGCCTCAAAGTGTAT--------AAAAATCAAAGGA i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1472024 222 - 1813869 CCTGTCATGTGCTCTGCAGACCCTGATGCTGTAT-GTC-TGTGTGTGCGTGTCCACA--------------------CCACACAATCACACACTGGACAGGAACACGCTTGACTTC-------AAGAACTCCG----------------------------TGGAGCT----------------CAGCACTGT-CGGGGCCGGGGGCGAG-ACCCCGGCACGGCGCCTTG-TC--GGGTGGCTGCACATC--TGTGTGCGAACAGAATTCTGCAGGCCTCAAAGTGTAT--------AAAAATCAAAGGA i aotNan1.NW_018494782v1 I 4778 C 0 s otoGar3.GL873575 10927274 246 - 12073884 -CCCTTTTGTGTTTTGC-CTCCATGATGCTGAGT-GTTCTGTTTCCGTGGGGTCGTG--------------------CTACATA-TCACACAGTGAACAGAAATGCTGTTTCTGATGGTAAGAAAGCTTTCCG----------AGATCGCCGGCAGC-CCAGGGAGCT----------------CAGTGCGGT-CACCAGCAGGTCCCAGCTCTGTGGCCTGACGCTCTC-TT-GGAGACCCTGCTTATC--TGTGCTAGAGCATTGTTCTGCAGGCCTCGGAGAGTGT--------AAGAATCCAAGGA i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56149876 243 + 122678785 CCTTGCACGTATTTTG-GGGCCCGGATGCTCAGTGGTC-TGCGTGGAGGTATTTCCAA-------------------CCATCTGATCTCATGCTGAGCAG-AGTGCCGTTGATTTG-------AAGGTTCTCA----------------------------GAAAACCCCTGAGACTGCTGGGGCGGCAACAT-GAGGATGAGGAGGGAG-TCCTGATCTTGACACCTGGACC-AAGGGAGACACAGATT--GGTGTGACTGCACCACGCAATAGGTCCTGGGGGATAGA-----AAAGAAATGAAAGGA i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 532981 263 + 760995 CCTTTCTTATCTTTTGCATACCTTAAGGCTAAGT-GTTCTGTGTCTATGTATTTATA--------------------TTATATAATAGCACACTGAATGGAAATGAAATTTTTTAA-------GAGACTTTCAGAAAACTCTCAGATCACTGGCCGTGTTATGGAGTT----------------TAGCAAAATCAAGAGTAAGGAGTTAATAGTTTGGCCTGACACTTTG-TCAAAGAAAGTTGTATATT--TGTTCTTTAACGAAATTCTTTAGGTCCTGAAGTATATAAAAAAaaaaaaatcaaagga i dasNov3.JH569188 C 0 C 0 a score=1843932.000000 s hg38.chr6_KB021644v2_alt 41924 188 + 185823 ATGGAAACTGTTTACCCAAACACGAAAGGGAG---GCTTTTATTCACGTGCACC-GGCGGAAGCGGCCGGTTTGTTAAACACCTGCCCCTCAGCTGTGGCTGGCCCTTCAGGCAAAGCTCTGCCACTCAAGGTGTTTGGAAAACACTGTCCAGACGAGGCCGTCATGAAACGGCTGCGCAGATGTTCAGCTG s panTro5.chr6 173508334 188 + 175400573 ATGGAAACTGTTTACCCAAACATGAAAGGGAG---GCTTTTATTCACGTGCACA-GGCGGAAGCGGCCGGTTTGTTAAACACCTGCCCCTCAGCTGTGGCTGGCCCTTCAGGCAAAGCTCTGCCACTCAAGGTGTTTGGAAAACACTGTCCAGACGAGGCCGTCATGAAACGGCTGCGCAGATGTTCAGCTG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171758692 188 + 173848474 ATGGAAACTGTTTACCCAAACATGAAAGGGAG---GCTTTTATTCACGTGCACA-GGCGGAAGCGGCCGGTTTGTTAAACACCTGCCCCTCAGCTGTGGCTGGCCCTTCAGGCAAAGCTCTGCCACTCAAGGTGTTTGGAAAACACTGTCCAGACGAGGCCGTCATGAAACGGCTGTGCAGATGTTCAGCTG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11445097 188 - 12463322 ATGGAAACTGTTTACCCAAACATGAAAGGGAG---GCTTTTATTCACGTGCACA-GGCGGAAGCGGCTGGTTTGTTAAACACCTGCCCCTCAGCTGTGGCTGGCCCTTCAGGCAAAGCTCTGCCACTCGAGGTGTTTGGAAAACACTGTCCAGACGAGGCCGTCATGAAACGGCTGCGCAGATGTTCAGCTG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156273750 186 + 157873769 ATGGAAACTGTTTACCCAAACATGAAAGGGAG---GCTTTTATTCACATGCACG-G--GGGTGCGGCCGGTTTGTGAAACACCTGCCCCTCAGCTGTGGCTCGCCCTTCAGGCAAAACCCTGCCACTCAAGGTGTTTGGAAAACACTGTCCAGACGAGGCCGTCATGAAACGGCTGTGCAGATGCTCAGCTG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170300591 188 + 172585720 ATGGAAACTGTTTACCCAAACATGAAAGGGAG---GCTTTTTTTCGTGTGCACG-GGCGGGAGCGGCTGGTTTGTTAAACACCTGCCCCTCAGCTGTGGCTCTCCCTTCAGGCAAAACTCCACCACTCAAGGTGTTTGGAAAACACTGTCCAGATGAGGCTGTCATGAAACGGCTGTGCAGATGTCCCGCTG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169046316 188 - 170955103 ATGGAAACTGTTTACCCAAACATGAAAGGGAG---GCTTTTTTTCATGTGCACG-GGCGGGAGCGGCTGGTTTGTTAAACACCTGCCCCTCAGCTGTGGCTCTCCCTTCAGGCAAAACTCCGCCACTCAAGGTGTTTGGAAAACACTGTCCAGACGAGGCTGTCATGAAACGGCTGTGCAGATGTCCCGCTG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8333193 188 + 10161646 ATGGAAACTGTTTACCCAAACATGAAAGGGAG---GCTTTTTTTCATGTGCTCG-GGCGGGAGCGGCTGGTTTGTTAAAAACCTGCCCCTCAGCTGTGGCTCTCCCTTCAGGCAAAACTCCGCCACTCAAGGTGTTTGGAAAACACTGTCCAGACGAGGCTGTCATGAAACGGCTGTGCAGATGTCCCGCTG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1362765 188 + 3144229 ATGGAAACTGTTTACCCAAACATGAAAGGGAG---GCTTTTTTTCATGTGCACG-GGCGGGAGCGGCTGGTTTGTTAAACACCTGCCCCTCAGCTGTGGCTCTCCCTTCAGGCAAAACTCCGCCACTCAAGGTGTTTGGAAAACACTGTCCAGACGAGGCTGTCATGAAACGGCTGTGCAGATGTCCCGCTG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96641980 188 + 98384682 ATGGAAACTGTTTACCCAAACATGAAAGGGAG---GCTTTTTGTCATGTGCACG-GGCGGGAGCGGCTGGTTTGTTAAACACCTGCCCCTCAGCTGTGGCTCTCCCTTCAGGCAAAACTCCCCCACTCAAGGTGTTTGGAAAACACTGTCCAGACGAGGCTGTCATGAAACGGCTGTGCAGCTGTCCCGCTG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8186406 188 - 10857215 ATGGAAACTGTTTACCCAAACATGAAAGGGAG---GCTTTTTTTCATGTGCACG-GGCGGGAGCGGCTGGTTTGTTAAACACCTGCCCCTCAGCTGTGGCTCTCCCTTCAGGCAAAACTCCGCCACTCAAGGTGTTTGGAAAACACTGTCCAGACGAGGCTGTCATGAAACGGCTGTGCAGATGTCCCGCTG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15580599 188 - 23502949 ATGGAAACTGTTTACCCAAACATAAAAGGGAG---GCTTTTTTTCATGTGCACG-GGCGGGAGCGGCTGGTTTGTTAAACACCTGCCCCTCAGCTGTGGCTCTCCCTTCAGGCAAAACTCCGCCACTCAAGGTGTTTGGAAAACACTGTCCAGACGAGGCTGTCATGAAACGGCTGTGCAGATGTCCGCCTG i colAng1.NW_012114488v1 C 0 C 0 s saiBol1.JH378287 1264868 185 - 2905041 ATGGAAACTGTTTACCCAAACATGAAAGGGAG---GC--TTTTTCATGTGCGAG-GGCAGGAGGGGCAGGTTCGTTAAGCACCTGCCTCTCAGCTGT-GCTCGCCCTTCAGGCAGAACTCTGCCACTCAAGGTGTTTGGAAAACGTTGTCCAGACCAGGCCGTCATGAAATGGCTGCCCAGATGTTCAGCTG i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1221792 186 - 2164891 ATGGAAACTGTTTACCCAAACATGAAAGGGAG---GC-TTTTTTCATGTGTGAG-GGCAGGAGTGGCAGGTTCGTTAAGCACCTGCCTCTCAGCTGT-GCTCGCCCTTCAGGCAAAACTCTGCCACTCAAGGTGTTTGGAAAATGTTGTCCAGACCAGGCCATCATGAAACGGCTGCCCAGATGTTCAGCTG i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1472246 186 - 1813869 ATGGAAACTGTTGGCCCAAACATGAAAGGGAG---GC-TTTTTTCATGTGCGAG-GGCAGGAGTGGCGGGTTCGTTAAGCACCTGCCTCTCAGCTGT-GCTCGCCCTCCAGGCAAAACTCTGCCACTCAAGGTGTTTGGAAAACGTTGTCCAGACCAGGCCGTCATGAAACGGCTGCCCAGATGTTCAGCTG i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10927520 162 - 12073884 CTGGGCACCGTGAGCCCAGGTGTGCA--GGGC---GCTGCTTCCCACCTGCT----GCTGGTGTGG--GGCTGGCTGCACCCCTG------------------TCCTTCAGGCAAA-CTCTGCCACTCGAGGTGTTTGGAAAACATTGTCTAGACTAATCTGTCACGAAACAGCTGCCCAGATATTCAGCTG i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56150119 126 + 122678785 GTGGGAACTGCTCATCCAAACCGGAGAGGGG--------------ATGCGTTTG-CTTGGGCGCCGCCGGCC-----AGCACCTGCCC-------------------TCAGGTGCAGCCTTATCTCTCACCGTGTTGGGAACTCAC-----------------CCTGCGACGGCGGCCCAGA---------- i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 533244 192 + 760995 atggaaactgtttatccaaacatgaaagggggtaaatttttaaaaatatgcctgtggctgaagtgataggcacggcaaacacctgctcttgagctgtggtttgcccttcaggcAGAACTCTACCATTCAAGGTGTTTGAAAAGCATCGTCCAGACTAATTCATCATGAAACAGCTGCCCAGATATTCAGTTG i dasNov3.JH569188 C 0 C 0 e calJac3.chr4 169846827 11 + 171630274 I a score=878792.000000 s hg38.chr6_KB021644v2_alt 42112 105 + 185823 CCTTTTAGCAGAACAG-ATGGATTTTATGATTTACAAAAGTGAA--A---CCTTT--------CGCTC-TCTTG-----------------------------------GTGT----TTTTTTGTGTGTCCTCTCTTCATCTGGGTGCACACAGGCCCC-- s panTro5.chr6 173508522 105 + 175400573 CCTTTTAGCAGAACAG-ATGGATTTTATGATTTACAAAAGTGAA--A---CCTTT--------CGCTC-TCTTG-----------------------------------GTGT----TTTTTTGTGTGTCCTCTCTTCATCTGGGTGCACACAGGCCCC-- i panTro5.chr6 C 0 C 0 s panPan2.chr6 171758880 104 + 173848474 CCTTTTAGCAGAACAG-ATGGATTTTATGATTTACAAAAGTGAA--A---CCTTT--------CGCTC-TCTTG-----------------------------------GTG-----TTTTTTGTGTGTCCTCTCTTCATCTGGGTGCACACAGGCCCC-- i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11445285 105 - 12463322 CCTTTTAGCAGAACAG-ATGGATTTTATGATTTACAAAAGTGAA--A---CCTTT--------CGCTC-TCTTG-----------------------------------GTGT----TTTTTTGTGTGTCCTCTCTTCATCTGGGTGCACACAGGCCAC-- i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156273936 105 + 157873769 CCTTTTAGCAGAACAG-ATGGATTTTATGATTTACAAAAGTCAA--A---CCTTT--------CGCTC-TCTCG-----------------------------------GTGT----TTTTTTGTGTGTCCTCTCTTCATCTGGGTGCACACAGGCCCC-- i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170300779 131 + 172585720 CCTTTTAGCAGAACAG-ACGGTTTTTATGATTTACCAAAGTCAA--A---CCTTT--------CGCTT-TCCTG---------gtgtgtgtgtgtgtgtgtgtgtgtgtgtgt----gtatgtgtgtgtCTTCTCTTCATCTGGGCGCACACAAGCCCC-- i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169046504 133 - 170955103 CCTTTTAGCAGAACAG-ACGGTTTTTATGATTTACCAAAGTCAA--A---CCTTT--------CGCTT-TCCTG-------gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt----gtatgtgtgtgtCTTCTCTTCATCTGGGCGCACACAAGCCCC-- i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8333381 135 + 10161646 CCTTTTAGCAGAACAG-ACGGTTTTTATGATTTACCAAAGTCAA--A---CCTTT--------CGCTT-TCCTGgt-----gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt----gtatgtgtgtgtCTTCTCTTCATCTGGGCGCACACAAGCCCC-- i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1362953 127 + 3144229 CCTTTTAGCAGAACAG-ACGGTTTTTATGATTTACCAAAGTCAA--A---CCTTT--------CGCTT-TCCTG-------------gtgtgtgtgtgtgtgtgtgtgtgtgt----gtgtgtgtgtgtCTTCTCTTCATCTGGGTGCACACAGGCCTC-- i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96642168 127 + 98384682 CCTTTTAGCAGAACTG-ACAGTTTTTATGGGTTACCAAAGTCAA--A---CCTTT--------CACTT-TCCTGGTGTTTC-------------tgtgtgtgtgtgtgtgtgt----gtctgtgtgtgtCTTCTCTTCATCTGGGTGCACACAGGCCCC-- i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8186594 140 - 10857215 CCTTTTAGCAGAACAG-ACGGTTTTTATGATTTACCAAAGTCAA--A---CCTTT--------CGCTT-TCCTGGTGTTTtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt----gtgtgtgtgtgtCTTCTCTTCATCTGGGTGCACACAAGCCCC-- i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15580787 138 - 23502949 CCTTTTAGCAGAACAG-ACGGTTTTTATGATTTACCAAAGTCAA--A---CCTTT--------CGCTT-TCCTGGTGTTTt--gtgtgtgtgtgtgtgtgtgtgtgtgtgtgt----gtgtgtgtgtgtCTTCTCTTCATCTGGGTGCACACAGGCCCT-- i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169846838 105 + 171630274 CCTTTTAGCAAAACAGAACGGTTTGAAAGGTTTACAAAAGTCAG--A---CCTTC--------GGCTT-TCCTG-----------------------------------GTGT-----TCTCTTCATGTCCTTTCTTCATCTGGGTGCACAGAGGACCC-- i calJac3.chr4 I 11 I 463 s saiBol1.JH378287 1265053 92 - 2905041 CCTTTTAGCAAAACAG--CGGTTTTTGTGACTTACAAAAGTCAG--A---CCTTT--------CGCTT-TCCTG-----------------------------------GTGT-----TCTC-----------TCTTCATCTGGGTGCACACAGGCCCT-- i saiBol1.JH378287 C 0 I 37 s cebCap1.NW_016107695v1 1221978 104 - 2164891 CCTTTTAGCAAAACAG-ATGGTTTTTATGATTTACGAAAGTCAG--A---CCTTT--------CGCTT-TCCTG-----------------------------------GTGT-----TCTCTTCATGTCCTGTCCTCATCTGCGTGCACACAGGCCCT-- i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1472432 93 - 1813869 CCGTTTAGCAAAACAG-ACGGTTTTTCTGATTTACAAAAGTCAG--A---CCTTT--------CGCTT-TCCTG-----------------------------------GTGT-----TCTCTCCACGTCCTCTCTTCACCTGGGTGC------------- i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10927682 105 - 12073884 CCTTTTAGCAAAACAG-ACTTTTTTTAAGATTGACAAAAGGCAAGGG---CCTTT--------CACTT-TCCCC-----------------------------------AGGTCCCATCCATAATGGGACCTTTCTTCATCGCAGCACCCATC-------- i otoGar3.GL873575 C 0 I 1 s canFam3.chr1 56150245 90 + 122678785 CCTCTCAGCAAAACAG-ACCTTTCCCGAGACTTAC-------AG--G---CCTTTCCAGAGACCTCTC-ACGTA-----------------------------------ATGT--------------------TCTCCGCCCCGGGGCAGCCAGGGCCC-- i canFam3.chr1 C 0 I 1 s dasNov3.JH569188 533436 109 + 760995 CCTTTTAGCAAAACAG-ACC-TTTCTAAGATTTACAAAAGTCAA--AGACCTTTT--------CTCTTCTCCTA-----------------------------------GCAC-----CGCTTTCATGTTCTTTCGTCATCTCAGCGCAGTGAAGTTCCCC i dasNov3.JH569188 C 0 C 0 a score=-7227.000000 s hg38.chr6_KB021644v2_alt 42217 2 + 185823 -GG s panTro5.chr6 173508627 2 + 175400573 -GG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171758984 2 + 173848474 -GG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11445390 2 - 12463322 -GG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156274041 2 + 157873769 -AG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170300910 2 + 172585720 -AG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169046637 2 - 170955103 -AG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8333516 2 + 10161646 -AA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1363080 2 + 3144229 -AG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96642295 2 + 98384682 -AG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8186734 2 - 10857215 -AG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15580925 2 - 23502949 -GG i colAng1.NW_012114488v1 C 0 C 0 s saiBol1.JH378287 1265182 2 - 2905041 -GG i saiBol1.JH378287 I 37 I 37 s cebCap1.NW_016107695v1 1222082 2 - 2164891 -GG i cebCap1.NW_016107695v1 C 0 I 4 s otoGar3.GL873575 10927788 1 - 12073884 -G- i otoGar3.GL873575 I 1 C 0 s canFam3.chr1 56150336 1 + 122678785 -G- i canFam3.chr1 I 1 I 1 s dasNov3.JH569188 533545 2 + 760995 AA- i dasNov3.JH569188 C 0 C 0 e aotNan1.NW_018494782v1 1472525 0 - 1813869 C e calJac3.chr4 169846943 463 + 171630274 I a score=794464.000000 s hg38.chr6_KB021644v2_alt 42219 102 + 185823 TGACACAGGCAATCCCA------------------------------------GAGCCCGCCCACG-GCACCCAGACCGAACACAGCCAGCGATGCCTC-CACACAGCCCA-GA--TTA-GAATTCTGGTTTCCTGGAATAAAA s panTro5.chr6 173508629 102 + 175400573 TGACACAGGCAATCCCA------------------------------------GAGCCCACCCACG-GCACCCAGACCGAACACAGCCAGCGATGCCTC-CACACAGCCCA-GA--TTA-GAATTCTGGTTTCCTGGAATAAAA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171758986 102 + 173848474 TGACACAGGCAATCCCA------------------------------------GAGCCCACCCACG-GCACCCAGACCGAACACAGCCAGCGATGCCTC-CACACAGCCCA-GA--TTA-GAATTCTGGTTTCCTGGAATAAAA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11445392 102 - 12463322 TGACACAGGCAATCCCA------------------------------------GAGCCCATCCACG-GCACCCAGACCGAACACAGCCAGCGATGCCTC-CACACAGCCCA-GA--TTA-GAATTCTGGTTTCCTGGAATAAAA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156274043 102 + 157873769 TGACACAGGCAATCCCA------------------------------------CAGCCCACCCATG-GCACCCAGATCAAACACAGCCAGTGATGCCTC-CACACACCGCA-GA--TTA-GAATTCTGGTTTCCTGGAGTAAAA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170300912 102 + 172585720 TGACACAGGCAGTCCCA------------------------------------GGGCCCACCCACG-GCACCGAGATCTAACACAGCCAGGAATACCTC-CACACAGCCCA-GA--TTA-GAATTCTGGTTAGGTGGAATAAGA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169046639 102 - 170955103 TGACACAGGCAGTCCCA------------------------------------GGGCCCACCCACG-GCACCGAGATCTAACACAGCCAGGAATGCCTC-CACACAGCCCA-GA--TTA-GAATTCTGGTTAGGTGGAATAAGA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8333518 102 + 10161646 TGACACAGGCAGTCCCA------------------------------------GGGCCCACCCACG-GCACCGAGATCTAACACAGCCAGGAATGCCTC-CACACAGCCCA-GA--TTA-GAATTCTGGTTAGGTGGAATAAGA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1363082 102 + 3144229 TGACACAGGCGGTCCCA------------------------------------GAGCCCACCCACG-GCACCGAGATCTAACACAGCCAGGAATGCCTC-CACACAGCCCG-GA--TTA-GAATTCTGGTTTGGTAGAATAAAA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96642297 102 + 98384682 TGACACAGGCAGTCCCA------------------------------------GAGCCCACCCATG-GCACCGAGATCTGACACAGCCAGGAACGCCTC-CACACAGCCCG-GA--TTA-GAATTCTGGTTTGGTGGAATAAAA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8186736 102 - 10857215 TGACACAGGCAGTCCCA------------------------------------GGGCCCACCCACG-GCACCGAGATCTAACACAGCCAGGAATGCCTC-CACACAGCCCG-GA--TTA-GAATTCTGGTTTGGTGGAATAAAA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15580927 102 - 23502949 TGACACAGGCAGTCCCA------------------------------------GAGCCCACCCATG-GCACCGAGATCTAACATAGCAAGGAATGCCTC-CACACAGCCCG-GA--TTA-GAATTCTAGTTTGGTGGCATAAAA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169847406 96 + 171630274 TAACACAG-----CCCC------------------------------------AAGCCCACCCACG-GCACCCAGAT-TAACACAGCCAGGGATGCCTC-CACGCAGCCCA-GA--TTA-GAATTCTGATTTGCTGAAGTAGGA i calJac3.chr4 I 463 C 0 s saiBol1.JH378287 1265221 132 - 2905041 TAACACGG-----CCCCGAGCCCACCCACGGCACCCAGATTTACATGGCCCCAGAGCCCACCCACG-GCACCCAGAT-TAGCACAGCCAGCGATGCCTC-CACATAGCCCA-GA--TTA-GAATTCTGCTTTGGTGGAATAGAA i saiBol1.JH378287 I 37 C 0 s cebCap1.NW_016107695v1 1222088 96 - 2164891 TCAGGTGG-----CCCT------------------------------------GAGCCCACCCACG-GCAGCCAGAT-TAACACAGCCAGTGATGCCTC-CACACAGCCTG-GA--TTA-GAATTCTGGTTTGGTGGAATTGAA i cebCap1.NW_016107695v1 I 4 C 0 s aotNan1.NW_018494782v1 1472525 59 - 1813869 --------------------------------------------------------------------------------GCACAGCCAGCGATGCCGC-CACACAGCCCG-GA--TTA-GAATTCTGGTTTGGTGGAACAGAC i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10927789 79 - 12073884 GGGCATGCACAGTCTC-------------------------------------GGGCACACCTGCA-GCACCCCAGTCGGACACCACGAG----ACTCT-CTCCCTGCCCA-GT--TGG-GGGTC------------------A i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56150338 97 + 122678785 GAGCACAG-------TT------------------------------------GTGCACATGCTCGTGCATCCAAGT--GGCACAGCTGGTGCAGCCTCATGGGCAGCCCG-GGCCTGG-GGGCTCCTGCGCCGGGGAATTAAG i canFam3.chr1 I 1 C 0 s dasNov3.JH569188 533547 101 + 760995 AGAAATAGAAAATTCCT------------------------------------TAATACATCCATA-ACATCCGAATGTAACACACTTAGTGACATCTC----ACAGTTTATGA--CTAGGAATTCTGGTTTGATGGAATGATG i dasNov3.JH569188 C 0 C 0 a score=2256917.000000 s hg38.chr6_KB021644v2_alt 42321 236 + 185823 ATCACACATTTCCCCAGGAGCTTCACTCTTATCTCTTCTTTTTCTCCCAGCATCTTTCCAATTTACTCTAATATGGTTACAG-AAATGCG--TCCAGTTCAAA----AATATTTTTAAAAACCAATCATGAACTCTCTTTAGTGTAAAGTGAAATAAAATTCTGGGTATTAGCTAAACCTTTATTTGACATCTCAAGACATATTAAAGTTGAATTCTTTTTCACTGCTCTAAAATAT-----TGTTTC s panTro5.chr6 173508731 235 + 175400573 ATCACACATTTCCCCAGGAGCTTCACTCTTATCTCTTCTTTTTCTCCCAGCATCTTTCCAATTTACTCTAATATGGTTACAG-AAATGTG--TCCAGTTCAAA----AATATTTTTAAAAACCAATCATGAACTCTCTTTAGTGTAAAGTGAAATAAAATTCTGGGTATTAGCTAAACCTTTATTTGACATCTCAAGACATATTAAAG-TGAATTCTTTTTCACTGCTCCAAAATAT-----TGTTTC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171759088 235 + 173848474 ATCACACATTTCCCCAGGAGCTTCACTCTTATCTCTTCTTTTTCTCCCAGCATCTTTCCAATTTACTCTAATATGGTTACAG-AAATGTG--TCCAGTTCAAA----AATATTTTTAAAAACCAATCATGAACTCTCTTTAGGGTAAAGTGAAATAAAATTCTGGGTATTAGCTAAACCTTTATTTGACATCTCAAGACATATTAAAG-TGAATTCTTTTTCACTGCTCTAAAATAT-----TGTTTC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11445494 235 - 12463322 ATCACACATTTCCCCAGGAGCTTCACTCTTATCTCTTCTTTTTCTCCCAGCACCTTTCCAATTTACTCTAATATGGTTACAG-AAATGTG--TCCAGTTCAAA----AATATTTTTAAAAACCAACCATGAACTCTCTTTAGTGTAAAGTGAAATACAATTCTGGGTATTAGCTAAACCTTTATTTCACATTTCAAGACATATTAAAG-TGAATTCTTTTTCACTGCTCTAAAATAT-----TGTTTC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156274145 233 + 157873769 ATCACGCATTTCCCCAGGAGCTTCACTCTTATCTCTTCTTTTTCTCCCAGCATCTTTCCAATTTACTCTAATATGGTTACAG-AAATGTG--TCCAGTTCAAA----AATATTTTTAAAAACCAACCATGAA--CTCTTTAGTGTAAAGTGAAATAAAATTCTGGATATTAGTTAAACTTTTATTTGACATCTCAAGATATATTAAAG-TGAATTCTTTTTCACTGCTGTAAAATAT-----TGTTTC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170301014 236 + 172585720 ATCATGCATTTCCCCAGGACCTTCACTCTCATCTCTTCTTTTTCTCCCAGCATCTTTCCAATTTACTCTAATATGGTTACAGTAAATGCG--TCCAGTTCAAA----AATATTTTTAAAAACCAACTATGCACTTTCTTTAGTGTAAAGTGAAATAAAATCCTAGATATTAGCTAAACCTTTATTTGACATCTCAAGATATATTAAAG-TGAATTATTTTTCACTGTTCTAAAATAT-----TGTTTC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169046741 236 - 170955103 ATCATGCATTTCCCCAGGACCTTCACTCTCATCTCTTCTTTTTCTCCCAGCATCTTTCCAATTTACTCTAATATCGTTACAGTAAATGCG--TCCAGTTCAAA----AATATTTTTAAAAACCAACTATGCACTTTCTTTAGTGTAAAGTGAAATAAAATCCTAGATATTAGCTAAACCTTTATTTGACATCTCGAGATATATTAAAG-TGAATTATTTTTCACTGCTCTAAAATAT-----TGTTTC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8333620 236 + 10161646 ATCATGCATTTCCCCAGGACCTTCACTCTCATCTCTTCTTTTTCTCCCAGCATCTTTCCAATTTACTCTAATATGGTTACAGTAAATGCG--TCCAGTTCAAA----AATATTTTTAAAAACCAACTATGCACTCTCTTTAGTGTAAAGTGAAATAAAATCCTAGATATTAGCTAAACCTTTATTTGACATCCCAAGATATATTAAAG-TGAATTATTTTTCACTGCTCTAAAATAT-----TGTTTC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1363184 236 + 3144229 ATCACGCATTTCCCCAGGACCTTCACTCTTACCTCTTCTTTTTCTCCCAGCATCTTTCCAATTTACTCTAATATGGTTACAGTAAATGTG--TCCAGTTCAAA----AATATTTTTAAAAACCAACTATGCACTCTCTTTAGTGTAAAGTGAAATAAAATCCTGGATATTAGCTAAACCTTTATTTGACATCTCAAGACATATTAAAG-TGAATTATTTTTCGCTGCTCTAAAATAT-----TGTTTC i cerAty1.NW_012002071v1 C 0 I 176 s chlSab2.chr13 96642399 236 + 98384682 ATCACGCTTTTCCCCAGGACCTTCACTCTTATCTCTTCTTTTTCTCCCAGCATCTTTCCAATTTACTCTAATATGGTTACAGTAAATGTG--TCCAGTTCAAA----AATATTTTTAAAAACCAACTATGCACTCTCTTTAGTGTAAAGTGAAATAAAATCCTGGATATTAGCTAAACCTTTATTTGACATCTCAAGACATATTAAAG-TGAATTATTTTTCACTGCTCTAAAATAT-----TGTTTC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8186838 236 - 10857215 ATCATGCATTTCCCCAGGACCTTCACTCTTACCTCTTCTTTTTCTCCCAGCATCTTTCCAGTTTACTCTAATATGGTTACAGTAAATGTG--TCCAGTTCAAA----AATATATTTAAAAACCAACTATGCACTCTCTTTAGTGTAAAGTGAAATAAAATCCTGGATATTCACTAAACCTTTATTTGACATCTCAAGACATATTAAAG-TGAATTAGTTTTCACTGCTCTAAAATAT-----TGTTTC i manLeu1.NW_012106474v1 C 0 I 167 s colAng1.NW_012114488v1 15581029 233 - 23502949 ATCATGCATTTCCCCAGGACCTTCACTCTTATC---TCTTTTTCTCCCAGCATCTTTCCAATTTACTCTAATATGGTTACAGTAAATGTG--TCCAGTTCAAA----AATATTTTTAAAAACCAACTATGCACTCTCTTTAGTGTAAAGTGAGATAAAATCCTGGATATTAGCTAAACCTTTATTTGACATCTCAAGACATATTAAAG-TGAATTATTTTTCACTGCTCTAAAATAT-----TGTTTC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169847502 229 + 171630274 ATCACACAGTGCCCCAGGAGCGTCAGTCTTA-CACTTCTTTTTCTCCCA-GCTCTTTCCAGTT-----TAATATGGTTACAGTAAATGTG--TCCAGCTCAAA----AAAACGTTTAAAGACCAGCCACGATCTCTCTTCAGTGTGAAGGGAAATAACATTCTGGATATTAGTTGAACCTTTATTTGGCATCTCAAGACACATTCAGG-TGAATTCTTTCTCGCTGCTCTAAAATAG-----CATTTC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1265353 230 - 2905041 ATCACACAGGGCCCCACAAGCGTCAGGCTTATCTCTTCTTTTTCTCTCAGGGTCTTTCCAGTT-----TAATATGGTTACAGTAAATGTG--TCCAGCTCAAA----AAAACGTTTAAAGACCAGCCATGATCTCTCTTCAGTGTGAAGTGAAATAAAATTCTGGATATTAGCTAAACCTTTATTTGACATCTC-AGACACATTCAAG-TGAATTCTTTTTCACTGCTCTAAAATAT-----CGTTTC i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1222184 227 - 2164891 ATCACACAGTGCCCCATGAGTGTCAGTCTTA---TCTCTTTTTCTCCCAGGGTCTTTCCAGTT-----TAATACGATTACAGTCAATGTG--TCCAGCTCAAA----AAAACTTTTAAAGACCAGCCATGATCTCTCTTCAGTGTGAAGTGAAATAAAATTCTGGATATTAGCTAAACC-TTATTTGACATCTCAAGACACATTCGAG-TGAATTCTTTTTCACTTCTCTAAAAAAT-----CGTTTC i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1472584 230 - 1813869 ATCACACAGTGCCCCATGAGCATCAGTCTTATCTCTCCTTTTTCTCCCAGGGTCTTTCCAGGT-----TAATATGGTTACAGTAAATGTG--TCCAGCTC-AA----AAAACTTTTAAAGACCAGCCATGATCTCTCTTCAGTGTGAAGTGAAATAAAATTCTGGATATTAGCTAGACCTTTATTTGACATCTCAAGACACATTCAAG-TGAATTCTTTTTCACTGCTCTAAAATAT-----CGTTTC i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10927868 200 - 12073884 GCTGCACATCTCCC------------TGTCACGGCTGCCTTCTGTC------TCTCCTCAGT------TGCTCTGGTAATAGTGAATGAG--CCTACAGTTAA----AGCATACTTAAGGACCAAAC---TACTCTCTTCAGTGCAAAGGAAGATGGAATTCTGGGTGTTAATTAGAGCTTTATTTGACATTTTAATAAATATTTATA-TG---------TCGCCACCCTAAAACAT-----TGTTTC i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56150435 226 + 122678785 AC--TGCATTTCCCCA------TCAGGCTTA-CTCGTCTTTTCCTC----------TTCCATTGACTGGAATACGGTTATAGTAAATGTGCATCAAATTTAAAAAATAAAAAAAGGAGAAACTAACGAT-TGCTGTCTT-GGTGTGAAGTAAAATGAAATTTTCACTGTTAATTAGAGCCTTTTTGGAAATCTCAAGAGCTGGTTAAG-TGAATTCTTTCTCCCTACCGGGAAACATAAAACAGTTTG i canFam3.chr1 C 0 C 0 e dasNov3.JH569188 533648 0 + 760995 C a score=84258.000000 s hg38.chr6_KB021644v2_alt 42557 9 + 185823 AATGC----------AAGC s panTro5.chr6 173508966 9 + 175400573 AATGC----------AAGC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171759323 9 + 173848474 AATGC----------AAGC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11445729 9 - 12463322 AATGC----------AAGC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156274378 9 + 157873769 AATGC----------AAGC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170301250 19 + 172585720 TGTGCTTTCCGCAAGAAGC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169046977 19 - 170955103 TGTGCTTTCCGCAAGAAGC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8333856 19 + 10161646 TGTGCTTTCCGCAAGAAGC i macNem1.NW_012011000v1 C 0 C 0 s chlSab2.chr13 96642635 19 + 98384682 TGTGCTTTCCGCAAGAAGC i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15581262 19 - 23502949 TGTGCTTTCTGCAAGAAGC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169847731 19 + 171630274 AATGCTTTCTGCAAGAAGC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1265583 19 - 2905041 AATGCTTTCTGCAAGAAGC i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1222411 19 - 2164891 AATGCTTTCTGCAAGAAGC i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1472814 19 - 1813869 AATGCTTTCTGCAAGAAGC i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10928068 19 - 12073884 AATGCTTTCTGCAAGGAGC i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56150661 19 + 122678785 AACATTCTTTGCAAGAAGC i canFam3.chr1 C 0 C 0 e dasNov3.JH569188 533648 0 + 760995 C e cerAty1.NW_012002071v1 1363420 176 + 3144229 I e manLeu1.NW_012106474v1 8187074 167 - 10857215 I a score=127128.000000 s hg38.chr6_KB021644v2_alt 42566 14 + 185823 AATAGGG-CCCCTAC s panTro5.chr6 173508975 14 + 175400573 AATAGGG-CCCCTAC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171759332 14 + 173848474 AATAGGG-CCCCTAC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11445738 14 - 12463322 AATAGAG-CCCCTAC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156274387 14 + 157873769 AATTGGG-CCCCTAC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170301269 14 + 172585720 AATAGGG-CCTCTAC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169046996 14 - 170955103 AATAGGG-CCTCTAC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8333875 14 + 10161646 AATAGGG-CCTCTAC i macNem1.NW_012011000v1 C 0 C 0 s chlSab2.chr13 96642654 14 + 98384682 AACAGGG-CCTCTAC i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15581281 14 - 23502949 AATAGGG-CCTCTAC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169847750 14 + 171630274 CACAGGG-CCCCTAC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1265602 14 - 2905041 AATAGGG-CCCCTAC i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1222430 14 - 2164891 AATAGGG-CCCCTAC i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1472833 14 - 1813869 AACAGGG-GCCCTAC i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10928087 13 - 12073884 AGT-GAG-TGTCTAC i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56150680 15 + 122678785 AATAGGGCCCCCTAC i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 533648 14 + 760995 AGTAGGC-CCCCTAC i dasNov3.JH569188 C 0 C 0 e cerAty1.NW_012002071v1 1363420 176 + 3144229 I e manLeu1.NW_012106474v1 8187074 167 - 10857215 I a score=3475534.000000 s hg38.chr6_KB021644v2_alt 42580 352 + 185823 TGTCCTGTTTTAATAA-A-GTGATTATTCCAAAGGAATGATCTGCTCTT---GGATGAGAAC-ATTTACATATGGCACTCTTTCTTCCAGGCAGGTA-TTTCCAACTCTGCTGTTTCTAAAAGGTCTCGAGAACTAGAGTGTTGGACGTGA--CTGAGA-TGGACTGAGAACACATTCTTCCCCTTTAAGTTATTAGATTCTCGGTGGTCCCGGGCA-AG-GATTGGGAAACGTTTCATTCAACAGGGATTGAGCC-TGTCGT------G-C----TGTTGAG--AGAAACATCAGGTGCATTTC------------------AACATCTTCTCATGGAATTTCTGGCCATCAATCACTGCAGGACTGT---AGGAGGGA----CCCTGGGGCCC------GGGCAGTT- s panTro5.chr6 173508989 352 + 175400573 TGTCCTGTTTTAATAA-A-GTGATTATTCCAAAGGAATGATCTGCTCTT---GGATGAGAAC-ATTTACATATGGCACTCTTTCTTCCAGGCAGGTA-TTTCCAACTCTGCTGTTTCTAAAAGGTCTGGAGAACTAGAGTGTTGGACGTGA--CTGAGA-TGGACTGAGAACACATTCTTCCCCTTTAAGTTATTAGATTCTCGGTGGTCCCGGGCA-AG-GATTGGGAAACATTTCATTCAACAGGGATCGAGCC-TGTCAT------G-C----TGTTGAG--AGAAACATCAGGTGCATTTC------------------AACATCTTCTCATGGAATTTCTGGCCATCAATCACTGCAGGACTGT---AGGAGGGA----CCCTGGGGCCC------GGGCAGTT- i panTro5.chr6 C 0 C 0 s panPan2.chr6 171759346 352 + 173848474 TGTCCTGTTTTAATAA-A-GTGATTATTCGAAAGGAATGATCCGCTCTT---GGATGAGAAC-GTTTACATACGGCACTCTTTCTTCCAGGCAGGTA-TGTCCAACTCTGCTGTTTCTAAAAGGTCTGGAGAACTAGAGTGTTGGACGTGA--CTGAGA-TGGACTGAGAACACATTCTTCCCCTTTAAGTTATTAGATTCTCGGTGGTCCCGGGCG-AG-GATTGGGAAACATTTCATTCAACAGGGATCGAGCC-TGTCGT------G-C----TGTTGAG--AGAAACATCAGGTGCATTTC------------------AACATCTTCTCATGGAATTTCTGGCCATCAATCACTGCAGGACTGT---AGGAGGGA----CCCTGGGGCCC------GGGCAGTT- i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11445752 352 - 12463322 TGTCCTGTTTTAATGA-A-GTGATTATTCCAGAGGAATGATCTGCTCTT---GGATGAGAAC-ATTTACATATGGTACTCTTTCTTCCAGGCAGGTA-TTTCCAACTCTGCTGTTTCTAAAAGGTCTCGAGAACCAGAGTGTTGGATGTGA--CTGAGA-TGGACTGAGAACACATTCCTCCCCTTTAAGTTATTAGATTCTCGGTGGTCCCTGGCA-AG-GATTGGGAAACATTTCATTCAACAGGGATTGAGCC-TGTCAT------G-C----TGTTGAG--AGAAACATCAGGTGCGTTTC------------------AACATCTTCTCATGGAATTTCTGGCCATCAATCACTGCAGGACTGT---AGGAGGGA----CCCTGAGGCCC------GGGCAGTT- i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156274401 352 + 157873769 ACTCCTGTTTTAATAA-A-GTGATTATTCCAAAGGAATGATCTGCTCTT---AGATGAGAACAATTTACACACGGCACTCTTTCTTCCAGGCAGATA-TTTCCAACTCTGCTGTTTCTAAAAGGTCTCGAGAACT--AGTGTTGGACGTGA--CTGAGA-TGGTCTGAGAACACATTCTTCCCGTTCAAGTTATTAGATTCTCGGTGGTCCCTGGCA-AG-GATTGGGAAACATTTCATTCAACAGGGACTGAGCCAGGTCGT------G-C----TGTTGAG--AGAAACATCAGGTGCATTTC------------------AACATCTTCTCCTGGAATTTCTGGCCATCAATCACTGCAGGACTGT---AGGAGGGA----CCCTGGGGCCC------GGGCAGTT- i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170301283 353 + 172585720 TGTCCCGTTTTAATAA-A-GTGATTATTGCAAAGGAATGATCTGCTCTT---AGATGAGAACTACTTACAGATGGCACTCTTTCTTCCAGGCAGATA-TTTCCAACTCTGCTGTTTCTACAAGGTAACGAGAACTAGAGTGTTGGACGTGA--CTGAGA-TGCACTGAGAACACATTCTTCCTCTTGAAGTTATTAGATTCTCGGTGGTCCCTGGCA-AG-GATTGGAAAACATTTCATTCAACAGGGATTGAGCCTGGTCGT------G-C----CGTTGAA--AGAAACATCAGGTGCATTTC------------------AACATCTTCTCATGGAATTTCTGGCCATCAATCACTGCAGGACTAT---AGGACCGA----CCCTGGGG-CT------GGGCAGTT- i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169047010 353 - 170955103 TGTCCCGTTTTAATAA-A-GTGATTATTGCAAAGGAATGATCTGCTCTT---AGATGAGAACTACTTACAGATGGCACTCTTTCTTCCAGGCAGATA-TTTCCAACTCTGCTGTTTCTACAAGGTAACGAGAACTAGAGTGTTGGACGTGA--CTGAGA-TGCACTGAGAACACATTCTTCCTCTTGAAGTTATTAGATTCTCGGTGGTCCCTGGCA-AG-GATTGGAAAACATTTCATTCAACAGGGATTGAGCCTGGTCGT------G-C----CGTTGAA--AGAAACATCAGGTGCATTTC------------------AACATCTTCTCATGGAATTTCTGGCCATCAATCACTGCAGGACTAT---AGGACCGA----CCCTGGGG-CT------GGGCAGTT- i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8333889 353 + 10161646 TGTCCCGTTTTAATAA-A-GTGATTATTGCAAAGGAATGATCTGCTCTT---AGATGAGAACTACTTACAGATGGCACTCTTTCTTCCAGGCAGATA-TTTCCAACTCTGCTGTTTCCACAAGGTAACGAGAACTAGAGTGTTGGACGTGA--CTGAGA-TGCACTGAGAACACATTCTTCCTCTTGAAGTTATTAGATTCTCAGTGGTCCCTGGCA-AG-GATTGGAAAACATTTCATTCAACAGGGATTGAGCCTGGTCGT------G-C----CGTTGAA--AGAAACATCAGGTGCATTTC------------------AACATCTTCTCATGGAATTTCTGGCCATCAATCACTGCAGGACTAT---AGGACCGA----CCCTGGGG-CT------GGGCAGTT- i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1363596 353 + 3144229 TGTCCCGTTTTAATAA-A-GTGATTATTGCACAGGAATGATCTGCTTTT---AGATGAGAACTGTTTACAGATGGCACTCTTTCTTCCAGGCAGATA-TTTCCAACTCTGCTGTTTCTACAAGGTAATGAGAACTAGAGTGTTGGACGTGA--CTGAGA-TGGACTGAGAACACATTCTTCCTCTTGAAGTTATTAGATTCTCGGTGGTCCCTGGCA-AG-GATTGGGAAACATTTCATTCAACAGGGATTGAACCTGGTCGT------G-C----TGTTGAA--AGAAACATCAGGTGCATTTC------------------AACATCTTCTCATGGAATTTCTGGCCGTCAATCACTGCAGGACTGT---AGGACCGA----CCCTGGGG-CC------GGGCAGTT- i cerAty1.NW_012002071v1 I 176 C 0 s chlSab2.chr13 96642668 353 + 98384682 TGTCCCGTTTTAGTAA-A-GTGATTATTGCACAGGAATGATCTGCTCTT---AGATGAGAACTACTTACAGATGGCACTCTTTCTTCCAGGCAGATA-TTTCCAACTCTGCTGTTTCTACAAGGTAACGAGAACTAGGGTGTTGGACGTGA--CTAAGA-AGGACTGAGAACACATTCTTCCTCTTGAAGTTATTAGGTTCTCGGTGGTCCCTGGCA-AG-GATTGGGAAACATTTCATTCAACAGGGATTGAGCCTGGTCAT------G-C----TGTTGAA--AGAAACATCAGGTGCATTTC------------------AACATCTTCTCATGGAATTTCTGGCCGACAATCACTGCAGGACTGT---AGGACCGA----CCCTGGGG-CT------GGGCAGTT- i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8187241 353 - 10857215 TGTCCCATTTTAATAA-A-GTGATTATTGCACAGGAATGATCTACTCTT---AGATGAGAACTGTTTACAGATGGCACTCTTTCTTCCAGGCAGATA-TTTCCAACTCCGCTGTTTCTACAAGGTAATGAGAACTAGAGTGTTGGACGTGA--CTGAGA-TGGACTGAGAACACATTCTTCCTCTTGAAGTTATTAGATTCTCGGTGGTCCCTGGCA-AG-GATTGGGAAACATTTCATTCAACAGGGATTGAGCCTGGTCGT------G-C----CGTTGAA--AGAAACATCAGGGGCATTTC------------------AACATCTTCTCATGGAATTTCTGGCCGTCAATCACTGCAGGACTGT---AGGACCGA----CCCTGGGG-CC------AGGCAGTT- i manLeu1.NW_012106474v1 I 167 C 0 s colAng1.NW_012114488v1 15581295 353 - 23502949 TGTCCCGTTTTAATAA-A-GTGATGATTGCAAAGGAATGATCTGCTCTT---AGATGAGAACTACTTACAGATGGCATTCGTTCTTCCAGGCAGATA-TTTCCAACTCTGCTGTTTCTACAAGGTAACGAGAACTAGAGTGTTGGACGTGA--CTGAGA-AGGACTGAGAACACTTTCTTCCTCTTGAAGTTATTAGACTCTTGGTGGTCCCTGGCA-AG-GATTGGGAAACATTTCATTCAGCAGGGAATGAGCCTGGTCGT------G-C----CGTTGAA--AGAAACATCAGGTCCATTTC------------------AACATCTTCTCATGGAATTTCTGGCCATCAATCACTGCAGGACTGT---AGGACCGA----CCCTGGGG-CC------GAGCAGTT- i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169847764 354 + 171630274 TGTCCAGCTTCAATAA-A-GCGATTATTCCAAAGGAACG-GCTGCTCTT---GGCTGAAAACTGCTCACATGTGGTGCTCTTTCTTCCAGGCATCTATTTTTTAACTCTGCTGTTTTCACAAGGTCACGGCAATGAGAGTGTTGGATGTGGCGCTGAGG-TGGCCCAAGAACACATTCTTCCTCTTGAAGTTATTAGATTCTTGGGGGTCCCTGGCA-AG-GATTGGGAAACCTTTCATTCACCAGGGATTGAGCCTGGCTGT------G-C----TGTTGAA--AGAAACATCAGGTGCATTTC------------------AACATCTTCTCATGGAATTTCTGGCAATCAATCACTGCAGGACGGT---AGGAGGGA-----TCTGGGC-CC------GGGCAGCT- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1265616 351 - 2905041 TGTCCAGTTTTAATAA-A-GTGATTATT-CAAAGGAATG-CCTGCTCTT---AGCTGAGAACTGTTTACATATGACACTCTTTCTTCCAGGCAGCTA-TTTTCAATTCTGTTGTTTCCACAAGGTCACAGTAATGAGAGTGTTGGATGTGGCTCTGAGG-TGGCCCAAGAACACATTCTTCCTCTTGAAGTTATTAGATTCTT-GGGGTCCCTGGCA-AG-GATTGGGAAACCTTTCATTCAACAGGGATTGAGCCTGGCCGT------G-C----TGTTGAA--AGAAACATCAGGTGCATTTC------------------AATATCTTTTCATGGAATTTCTGGCAATCAATCACTGCAGGACGGG---AGGAGGGA-----TCTGGGC-CC------GGGCAGCT- i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1222444 352 - 2164891 TGTCCAGTTTTCATAA-A-GCGATTATTCCAAAGGAATG-CCTGCTCTT---AGCT-ACGACTGTTTACATATGACACTCTTTCTTCCAGGCAGTTA-TTTTCAACCCTGCTGTTTCCACAAGGTCACAGTAACGAGAGTGTTGGATGTGGCTCTGAGG-TGGCCCAAGAACACATTCTTCCTCTTGAAGTTATTAGATTCTTGGGGGTCCCTGGCA-AG-GATTGGGAAACCTTTCATTCAACAGGGATTGAGCCTGGCTGT------G-C----TGTTGAA--AGAAACATCAGGTGCATTTC------------------AACATCTTCTCATGGAATTTCTGGCAATCAATCACTGCAGGACGGT---AGGAGGGA-----CCTGGGC-CC------GGGCAGCT- i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1472847 352 - 1813869 TGTCCAGTTTTAATAA-A-GCGATTGTTCCAAAGGAATG-CCTGCTCTT---AGCTGAGAACTGTTTACATATGGCACTCTCTCTTCCAGGAAGCTC-TTTTCAACTCTGCTGTTTCCACAAGGTCACAGTAACGAGAGTGTTGGATGTGGCTCTGAGG-TGGCCCAAGAACGCATTCTTCCTCTTGAAGTTATTAGGTTCTTGGGGGTCCCTGGCA-AG-GATTGGGAAACCTTTCATTCAACAGGGATTGAGCCTGGCTGT------G-C----TGCTGAA--AGGAACATCAGGTGCATTTC------------------AACATCTTCTCATGGAATTTCTGGCAATCAATCAC-GCAGGACAGT---AGGAGGGA-----CCTGGGC-CT------GGGCAGCT- i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10928100 359 - 12073884 TGCCCAGTTTTAACAG-A-GTAGCCGTTCAGAGAACACGATGTGTTCTT---AGACAAGAATTGTCTACACATAGCTCTGCTTGTTCCAGG-AAACA-CCTTTGAGAGTGTGGCCTCTCCAGCCTCCCAGTAGC-ACTGTGCTGGGTGGGC--CAGGAACTGGGCTCAGAGCACG-TCCTGTGCTGGAATTTGTTAGACTCCAGGTGGCCCAGGGAA-TGAGATTGGGAAA-ATCCCAGTCAGCAGGGAATGAGCCTGGTCTTGCTAGAG-C----TGTTGAATGGGGAGTCTCAGGTACCTCCC------------------A--GTGTTCCGACAGAGCTTCCCACCCTCAAAC-TTGCAGATATGTGGCAGGAGGGG----CTGTGGGC-CT------GGGGAGCT- i otoGar3.GL873575 C 0 I 3032 s canFam3.chr1 56150695 289 + 122678785 CGCCCAGTTTCAACAGCA-GTGACCCTTTC-TGGGAAAGATCTGCTCTTTTGAGTCAAGAATGACCT-----------------TTCCAGGAGAGCT-TTGTTAACCGTGCCATTTCCA--------CGGTGACCACAGTGCTGGATTTGT----------------------------TCCTCTGGATTGTGTTGGATTCTATGTGGCCCCCGGCACAG-GGCTGGGACCCATCTCATTTGAGGCGGACACAGGCTCGCGAT------GAC----TGCATAT--TCACCGATGAGCTGACTGTC------------------ATCACCAGGTC-------------------ATCACCGGGTCACTGG---AGGGGGCA----CCCAGGGC-CC------CGTGGCCT- i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 533662 386 + 760995 TGGCCAGTTTTAATGA-ACACGGTCATTCAAAGAAAGTAATCTGCTTTT---GACAAAGAACTGTGGACGTGTGGCTCTGGTTTCTCTAGGGCAATGCTTTCTAACTATGTTATTTCTA-AATGTCATCATAACTAGAACACTGGATTGGA--TTAGGA---GACAGAGAACACATTCTGTTCTCTGACTTTGTTAGATTCTAGGTGGTCCATAGTAAAG-AATTGGGAAGCATTTCACTCAACAGGGACTGAGCCTCATTTT------G-CTAGATGTTTAA--AGAGACATCAGCAACATTCCTGTGTAGCTGGAAGGAAAAACATATTCACATGGAGTACCTAACCGTCAATCATCGCAGGATTAC---AGAAGGAGGAATCAGTGGGG-ACTCAGAAAGGAAGTTT i dasNov3.JH569188 C 0 C 0 a score=4011440.000000 s hg38.chr6_KB021644v2_alt 42932 459 + 185823 CATG--AC-ACGGCCTGGAGGGAAGCA------TACC------------GGCCATGGCCTGAGTCCCAGAGCAGGACGGAGGCTGCGCCTGTCAGGGGGGCTT--GCCAGCCTGCAGAGTGTAGACAT-CGTGTAAATGTCAAGGAGTGTCACAGGACAAGCGTGTTGCTGAGAGAAGGTGTCCTgtgcgaggtgtgcaggggtg-at---agg--------------tgttgaggatgctgag---tccag---agggcagaggCCTGGGGCGGTGGGCACGTCACCAGCAGAGAGGCCGCTGGAGACCACAGAGGAAGTCGAACCCAGG-GGACAGAGCT---------------GTGTCC------------------CAGAATGAGCTGACGGTCTCCATGGCTGCTTAGGTAGAGATGACAAGGGGGAAAGAGAAAGAGGCTTGGCAGTTTCTGTCCCAGGAAGA-GGATGGTTCCACTAAAAGTAGAAGGCCCTGGCCCGCTGGGGCTTTCTCAGGGGCTGGAGGGGAATGCGAGG s panTro5.chr6 173509341 460 + 175400573 CATG--AC-ATGGCCTGGAGGGAAGCA------TACC------------GGCCATGGCTTGGGTCCCAGAGCAGGACGGAGGCTGGGCCTGTCAGGGGGGCTT-GGGCAGCTTGCAGAGTGTAGACAT-CGTGTAAATGTCAAGGAGTGTCACAGGACAAGCGTGTTGCTGAGAGAAGGTGTCCTgtgcgaggtgtgcagcggtg-at---agg--------------tgttgaggatgctgag---tccag---agggcagaggCCTGGGGCGGTGGGCACGTCACCAGCAGAGAGGCCGCTGGAGACCACAGAGGAAGTCGAACCCAGG-GGACAGAGCT---------------GTGTCC------------------AAGAATGCGCTGACGGTCTCCATGGCTGCTTAGGTAGAGATGACAAGGGGGAAAGAGAAAGAGGCTTGGCAGTTTCTGTCCCAGGAAGA-GGATGGTTCCACTAAAAGTACAAGGCCCTGGCCCGCTGGGGCTTTCTCAGGGGCTGGAGGGGAATGCGAGG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171759698 460 + 173848474 CATG--AC-ATGGCCTGGAGGGAAGCA------TACC------------GGCCATGGCTTGGGTCCCAGAGCTGGACGGAGGCTGGGCCTGTCAGGGGGGCTT-GGGCAGCTTGCAGAGTGTAGACAT-CGTGTAAATGTCAAGGAGTGTCACAGGACAAGCGTGTTGCTGAGAGAAGGTGTCCTgtgcgaggtgtgcagcggtg-at---agg--------------tgttgaggatgctgag---tccag---agggcagaggCCTGGGGCGGTGGGCACGTCACCAGCAGAGAGGCCGCTGGAGACCACAGAGGAAGTCGAACCCAGG-GGACAGAGCT---------------GTGTCC------------------AAGAATGCGCTGACGGTCTCCATGGCTGCTTAGGTAGAGATGACAAGGGGGAAAGAGAAAGAGGCTTGGCAGTTTCTGTCCCAGGAAGA-GGATGGTTCCACTAAAAGTACAAGGCCCTGGCCCGCTGGGGCTTTCTCAGGGGCTGGAGGGGAATGCGAGG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11446104 460 - 12463322 CATG--AC-ACGGCCTGGAGGGAAGCA------TACC------------GGCCATGGCTTGGGTCCCAGAGCAGGACGGAGGCTGCGCCTGTCAGGGGGGCTT-GGGCAGCTTGCAGAGTGTAGACAT-CGTGTAAATGTCAAGGAGTGTCACAGGACAAGTGTGTTGCTGAGAGAAGGTGTCCTGTGCGAGGTgtgcaggggtg-at---agg--------------tgttgaggatgctgag---tccag---agggcagaggCCTGGGGCGGTGGGCACGTCACCAGCAGAGAGGCCGCTGGAGACCACAGAGGAAGTCGAACCCAGG-GGACAGAGCT---------------GTGTCC------------------AAGAAAGAGCTGATGGTCTCTATGGCTGCTTAGGTAGAGATGACAAGGGGGAAAGAGAAAGAGGCTTGGCAGTTTCTGTCCCAGGAAGA-GGATGGTTCCACTAAAAGTAGAAGGCCCTGGCCCGCTGGGGCTTTCTCAGGGGCTGGAGGGGAATGCGAGG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156274753 464 + 157873769 CATG--AC-ACGGCCTGGAGGGAAGCG------CACT------------GGCCATGGCTTGGGTCCCAGAGCAGGACGGAGGCTGCGCCTGTCAGGAGGGCTT-GGGCAGCTTGCAGAGTGGAGACATCCGTGTAAATGTCAAGGAGCGTCACAGAACAAGCGTGTTGCTGAGAGAAGGTGTTCTGTGCGAGGCATGCAGGGGTG-ATGACAGG--------------TGTTGAGGATGCTGAG---TCCAG---AGGGCAGAGGCCTGGGGTGGTGGGCACGTCACCAGCAGAGAGGCCGCTGGAGACCACAGAGGAGGTCGAACCCAGG-GGACAGAGCT---------------GTGTCC------------------AAGAACGAGTTGATAGTCTCCATGGCTGCTTAGGTAGAGATGACAAGGGGGACAGAGAAAGAGGCTTGGCAGTTTCTGTCCCAGGAGGA-GGATGGTTCCACTAAAAGTAGAAGGCCCTGGCCTGCTGGGGCTTTCTTAGGGGCTGGAGGGGAATACAAGG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170301636 458 + 172585720 CATG--AC-ACGGCCTGGAGGGAAGCG------CACT------------GGTCATGGCTTGGGTCCCAGAGCAGGACAGAAGCTGCACCTGTCAGGAGGGCTT-GGGCAGCTCGCAGAGTGTAGACATCTGTGTAAATGTTAAGAAGCGTCACAGGACAAGTGTGTTGCTGAGAGAAGGTGTTCTGTGAGAGGCgtgcaggggtg-at---agg--------------tgttgaggatgctgag---tccag---agggcagaggcctggggcagtgggcaCGTCACTAGCAGAGAGGCTGCTGGAGACCACAGAGGAAGATGAACCCAGG-AGACA---CT---------------GTGTCT------------------AAGAACAAGCTGATGGTCTCCATGGCTGCTTAGGTAGAGATGACAAGGGGGAAAGAGAAAGAGGCTTGGTAGTTTCTGTCCCAGAAAGA-GGATGGTTCCACTAAAAGTAGAAGGCCCTGGCCCGCTGGGGCTTTCTCAGGGGTTGGAGGGGAATGCGAGG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169047363 459 - 170955103 CATG--AC-ACGGCCTGGAGGGAAGCG------CACT------------GGTCATGGCTTGGGTCCCAGAGCAGGACAGAGGCTGCACCTGTCAGGAGGGCTT-GGGCAGCTCGCAGAGTGTAGACATCTGTGTAAATGTTAAGAAGCGTCACAGGACAAGTGTGTTGCTGAGAGAAGGTGTTCTGTGAGAGGCgtgcaggggtgaat---agg--------------tgttgaggatgctgag---tccag---agggcagaggCCTGGGGCAGTGGGCACGTCACTAGCAGAGAGGCTGCTGGAGACCACAGAGGAAGATGAACCCAGG-AGACA---CT---------------GTGTCC------------------AAGAACAAGCTGATGGTCTCCATGGCTGCTTAGGTAGAGATGACAAGGGGGAAAGAGAAAGAGGCTTGGTAGTTTCTGTCCCAGAAAGA-GGATGGTTCCACTAAAAGTAGAAGGCCCTGGCCCGCTGGGGCTTTCTCAGGGGTTGGAGGGGAATGCGAGG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8334242 459 + 10161646 CATG--AC-ACGGCCTGGAGGGAAGCG------CACT------------GGTCATGGCTTGGGTCCCAGAGCAGGACAGAGGCTGCACCTGTCAGGAGGGCTT-GGGCAGCTCGCAGAGTGTAGACATCTGTGTAAATGTTAAGAAGCGTCACAGGACAAGTGTGTTGCTGAGAGAAGGTGTTCTGTGAGAGGTGTGCAGGGGTGAAT---AGG--------------TGTTGAGGATgctgag---tccag---agggcagaggcctggggcagtgggcaCGTCACTAGCAGAGAGGCTGCTGGAGACCACAGAGGAAGATGAACCCAGG-AGACA---CT---------------GTGTCC------------------AAGAACAAGCTGATGGTCTCCATGGCTGCTTAGGTAGAGATGACAAGGGGGAAAGAGAAAGAGGCTTGGTAGTTTCTGTCCCAGAAAGA-GGATGGTTCCACTAAAAGTAGAAGGCCCTGGCCCGCTGGGGCTTTCTCAGGGGTTGGAGGGGAATGCGAGG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1363949 462 + 3144229 CATG--AC-ACGGCCTGGAGGGAAGCA------CGCT------------GGTCATGGCTTGGGTCCCAGAGCAGGACGGAGGCTGCACCTGTCAGGAGGGCTT-GGGCAGCTCGCAGAGTGTAGACATCTGTGTAAATGTTAAGAAGCATCACAGGACAAGCGTGTTGCTGAGAGAAGGTGTTCTGTGAGAGGCGTGCAGGGGTGAAT---AGG--------------TGTTGAGGATgctgag---tccag---agggcagaggcctggggcggtgggcaCATCACTAGCAGAGAGGCTGCTGGAGACCACAGAGGAAGTCGAACCCAGG-GGACACAGCC---------------GTGTCC------------------AAGAACAGGCTGATGGTCTCCATGGCTGCTTAGGTAGAGATGACAAGGGGGAAAGAGAAAGAGGCTTGGTAGTTTCTGTCCCAGGAAGA-GGATGGTTCCATTAAAAGTAGAAGGCCCTGGCCCGCTGGGGCTTTCTCAGGGGTGGGAGGGGAATGCGAGG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96643021 462 + 98384682 CATG--AC-ACGGCCTGGAGGGAAGCG------CGCT------------GGCCATGGCTTGGGACCCGGAGCAGGACGGAGGCTGCACCTTTCAGGAAGGCTT-GGGCAGCTCGCAGAGTGTAGACATCTGTGTAAATGTCAAGAAGCGTCACAGGACAAGCGTGTTGCTGAGAGAAGGTGTTCTGTGAGAGGCGTGCAGGGGTGAAT---AGG--------------TGTTGAGGATGCTGAG---TCCAG---AGGACAGAGGCCTGGGGCGGTGGGCACGTCACCAGCAGACAGGCTGCTGGAAACCACAGAGGAAGTCGAACCCAGG-GGACACAGCC---------------GTGTCC------------------AAGAACAAGCTGATGGTCTCCATGGCTGCTTAGGTAGAGAAAATAAGGGGGGAAGAGAAAGAGGCTTGGTAGTTTCTGTCCCAGGAAGA-GGATGGTTCCCCTAAAAGTAGAAGGCCCTGGCCCGCTGGGGCTTTCTCAGGGGTTGGAGGGGAATGGGAGG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8187594 459 - 10857215 CATG--AC-ACGGCCTGGAGGGAAGCG------CACT------------GGTCATGGCTTGGGTCCCAGAGCAGGACGGAGGCTGCACCTGTCAGGAGGGCTT-GGGCAGCTCGCAGAGTGTAGACATCTGTGTAAATGTCAAGAAGCGTCACAGGACAAGTGTGTTGCCGAGAGAAGGTGTTCTGTGAGAGGCgtgcaggggtgaat---agg--------------tgttgaggatgctgag---tccag---agggcagaggCCTGGGGCGGTGGGCACGTCACTAGCAGAGAGGCTGCTGGAGACCACAGAGGAAGATGAACCCAGG-AGACA---CT---------------GTGTCC------------------AAGAACAGGCTGATGGTCTCCATGGCTGCTTAGGTAGAGATGACAAGGGGGAAAGAGAAAGAGGCTTGGTAGTTTCTGTCCCAGGAAGA-GGATGATCCCACTAAAAGTAGGAGGCCCTGGCCCGCTGGGGCTTTCTCAGGGGTGGGAGGGGAATGCGAGG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15581648 450 - 23502949 CATG--AC-ACGGCCTGGAGGGAAGTG------CGTT------------GGCCATGGCTTGGGTCCCAGAGCAGGACGGAGGCTGCACCTGTCAGAAGGGCTTGGGGCAGCTCGCAGAGTGTAGACATCCGTGTAAATGTCAAGAAGCGTCGCAGGACAAGTGCGTTGCTGAGAGAAGGTGTTCTGTGAGAGGCgtgcaggggtgaat---agg--------------tgttgaggctgctgag---tccag---agggcagaggCCTGGGGCGGTGGGCACGTCACCAGCAGAGAGGCTGCTGGAGACCACAGAGGAAGTCGAACCCAGG--GATACAGCT---------------GTGTCC------------------ACGAACAAGCTGATGGTCTCCGTGGCTGCTTA-GTAGAGATGACAAGGGGGACAGAGAAAGAGGCTTGGTAGTTTCTGTCCCAGGAAGA-GGATGATTCCACTAAAAGTAGAAGGCCCTGGCCCGCTG-----------GGGGTTGGAGGGGAATGTGAGG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169848118 417 + 171630274 CATG--AC-CCAGCCTGGAGGGAAGC---------TG------------GGCCATGGCTTGTGGCCCAGAGCAG---------------------------------------GAAGAGGGTAGAAATCCGTGTGAATGTCAAGGAGCACCATGGGACAAGCGTGTTGCT--GAGAAGGTGTTCTGTGCAAGGTGTACAGGGATG-GC---GAC--------------TGTTGAGGATGCTGAG---TGCAG---AGCGCAGAGGCCTGGGGTGCTGGGCACATCACCAGCAGAGAGGCCGCTGGAGCCCACAGAGGAAGGGAAACCTGGT-GGACAGAGCT---------------GTGTCC------------------GAGAATGAGCTGATGGTGCCCACCGCTGCTTAGGTAGCGATGACAAGGGGGAAGGAGAAGGAGGCTTCACAGCTTCTGCCCCAGGAAGA-AGATGGTTCCCCGAAGAGTAGAAGGCCCTCGTCC-CTGGGGCTTGCTCAAGGGCTGGAGGGGAATGTGAGG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1265967 441 - 2905041 TATG--AC-CCAGCCTGGAGGGAAGC---------CG------------GACCATGGCTTGTGGCCCAGAGCCGGAGGGAGGT--------------GGGCCT-GGGCAGCTCGAAGGGTGTGGAAATCCGTGTAAATGTCAAGGAGTGCCACGGGACAAGCGTGTTGCT--GAGAAGGCGTTCTGAGCGAGGCGTGCAGGGATG-AT---GGC--------------TGTTGAGGATGCCGAG---GGCGG---AGGGCAGAGGCCTGGGGAGGCGGGCACGTCACCAGCAGAGAGGCCACTGGAGCCCACAGAGGAAGTGAAACCTGGT-GGACTGAGCT---------------GTGTCC------------------GAGATTGAGCTGATGGTGCCCACAGCTGCTTAGGCAGCGATGACAAGGGGGAAGGAGAAAGAGGCTTCGCAGCTTCTGCCCCAGCGAGA-AGACGGTTCCCCGAAGAGTCGAAGGCCCGCGCCC-CTGGGGCTTGCTCGAGGGCTGGAGGGGAGTGTTAGG i saiBol1.JH378287 C 0 I 19 s cebCap1.NW_016107695v1 1222796 418 - 2164891 CATG--AG-CCAGCCTGGAGGGAAGC---------CG------------GGCCATGGCTTGTGGCCCAGAGCAGGAGGAAAGT--------------GGGCCT-GGGCAGCTCGAAGAGTGTAGAAATCCGTGTGAATGTCAAGGAGCGCCACGGGACAAGCGTGTTGCT--GAGAAGGTGTTCTGTGCGAGGCGAGCAGGGATG-AT---GGC--------------TGTTGAGGATGCTGAG---TGCGG---AGGGCA----------------------TCACCAGCAGAGAGGCCGCTGGAGTCCACAGAGGAAGTGAAACCTGGT-GGGCAGAGCT---------------GTGTCC------------------GAGAATGAACTGATGGTGCCCACAGCTGCTTAGGTAGCGATGACAAGGGGGAAGGAGAAAGAGGCTTCGCAGC-TCTGCCCCAGGGAGG-AGATGGTTTCCCAAAGAGTAGAAGGCCCTCGTCC-CTGGGGCTTGCTCAAGGGCTGGAGGGGAGTGTGAGG i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1473199 441 - 1813869 CATG--AC-CCAGCCTGGAGGGAAGC---------CG------------AGCCATGGCTTGTGACCCATAGCAGGAGGGAGGT--------------GGGCCT-GGGCAGCTCGCAGAGTGTTGAAATCCACGTGAATGTCAAGGAGTGCCACGCGACAAGTGTGTTGCT--GAGAAGGTGTTCTGTGCGAGGCGTGCAGGGATG-AT---GGC--------------TGTTGAGGATGCTGAG---TGTGG---AGGGCAGAGGCCTGGGGTGCTGGGCACGTCACCAGCAGAGAGGCCGCTGGAGCCCACAGAGGAAGTGAAACCTGGG-GGACAGAGCT---------------GTGTCC------------------GAGAATGAGCTGATGGTGCCCATGGCTGCTTAGGTAGCGATGACAAGGGAGCAGGAGAAAGAGGCTTCGCAGCTTCTGCCCCAGGGAGA-AGACGGTTTACCGAAGAGTAGAAGGCCCTCGTCC-CTGGGGCTTGCTCGAGGGCTGGAGGGGAATGTGAGG i aotNan1.NW_018494782v1 C 0 C 0 s canFam3.chr1 56150984 376 + 122678785 CATG--ATGGCAGGTGTTAGGAAAGTGTGGGACTGAC------------GCCAAGGGCCTGTGTCCCCGCAGTGGGAGGACGCCG---CTGTCAGAAGTCACC---GCCGACTGCAGAACAGAGAAACCCCTGTAACATTCAAGGTAAGTTGTAGGACAAG-GTGCCTCCCTGAGAGAGCCGTCTGCG-GGGTCCTGCAGA-----GC---AGG--------------CAGCGAGAA-----------CCAA---CGTCCTGAGGCC----------------------------------------ACCACAGAGGGAAGGGCACCCGAGCAGACCCAGAG---------------CCACCC------------------CAGAGCAAGCTGGT-GTGTATCTGATCACCCAGATGGAGGACAGAAAAGGGGAAGAGA----------GCATTTCTACTTTCATGAGCATGGAGGGTTT---------------GCTCT---------GGGCTTGATTGAGGGCTGGGAGGAAGCACAAGA i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 534048 515 + 760995 CATGGAAG-CAGGCTTGGAGGCTATTC------CATTGTGGTAAATGAAGGAGAGAGCTTGCATCAGGAAGCAG---GTAGATTTTACCTGCTAGGTACCCCAGGGACAGACTGCAGTGTGTTGAATTTCATATAACTTTCAAGGGATGTTATGTGATGAAAACATTGCTGAGAGAAATTAATCAGGTAGTTATGTGCAGAATAGAAT---GGAATAGTGGCTAAAACTGGTAAAGATACTGAGGGATCTAATGCAGCCTGAAGACCTGACATGAT---CTCTGCACTAGTGCAGAGGTCACTAGAATTGCTAGAAAGAGAAAGAACCAGA-TGaaaaaaacaataagaaaaaaaaagcataccaaaaaagaaaaagaaaaaaaaaaaagaaGATGGACTT--TGGACTAAAAGATGGAGATTATGAAGAAGGAAAACT-ATATGTTTGGTAGTTTCTTGAGTAGGTAGA-TGA------CATTGACAGCAGAAGAAAGTTACTCACTAGAACTTCTTTGGGGGCTGGGAAGAAACGCGAAG i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10928459 3032 - 12073884 I a score=65895.000000 s hg38.chr6_KB021644v2_alt 43391 8 + 185823 AGCTTGAT s panTro5.chr6 173509801 8 + 175400573 AGCTTGAT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171760158 8 + 173848474 AGCTTGAT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11446564 8 - 12463322 AGCTTGAT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156275217 8 + 157873769 AGCTTGAT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170302094 8 + 172585720 AGCTTGAT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169047822 8 - 170955103 AGCTTGAT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8334701 8 + 10161646 AGCTTGAT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1364411 8 + 3144229 AGCTTGAT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96643483 8 + 98384682 AGCTTGGT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8188053 8 - 10857215 AGCTTGAT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15582098 8 - 23502949 AGCTTGAC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169848535 7 + 171630274 AGC-TGAT i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1223214 7 - 2164891 AGC-TGAT i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1473640 7 - 1813869 AGC-TGAC i aotNan1.NW_018494782v1 C 0 C 0 s canFam3.chr1 56151360 8 + 122678785 GGCTGGAT i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 534563 8 + 760995 AGCTTAGT i dasNov3.JH569188 C 0 I 286 e otoGar3.GL873575 10928459 3032 - 12073884 I e saiBol1.JH378287 1266408 19 - 2905041 I a score=38870.000000 s hg38.chr6_KB021644v2_alt 43399 5 + 185823 GTTAG s panTro5.chr6 173509809 5 + 175400573 GTTAG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171760166 5 + 173848474 GTTAG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11446572 5 - 12463322 GTTAG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156275225 5 + 157873769 GTTAG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170302102 5 + 172585720 ATTAG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169047830 5 - 170955103 ATTAG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8334709 5 + 10161646 ATTAG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1364419 5 + 3144229 ATTAG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96643491 5 + 98384682 ATCAG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8188061 5 - 10857215 ATCAG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15582106 5 - 23502949 ATTAG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169848542 5 + 171630274 GTTAG i calJac3.chr4 C 0 I 10 s cebCap1.NW_016107695v1 1223221 5 - 2164891 GTTAG i cebCap1.NW_016107695v1 C 0 I 24 s aotNan1.NW_018494782v1 1473647 5 - 1813869 GTTAG i aotNan1.NW_018494782v1 C 0 I 10 s canFam3.chr1 56151368 5 + 122678785 CCTGG i canFam3.chr1 C 0 C 0 e otoGar3.GL873575 10928459 3032 - 12073884 I e saiBol1.JH378287 1266408 19 - 2905041 I e dasNov3.JH569188 534571 286 + 760995 I a score=78493.000000 s hg38.chr6_KB021644v2_alt 43404 15 + 185823 ACACGGC-----------GGCAAAGC s panTro5.chr6 173509814 15 + 175400573 ACACGGC-----------GGCAAAGC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171760171 15 + 173848474 ACACGGC-----------GGCAAAGC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11446577 15 - 12463322 ACACGGC-----------GGCAAAGC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156275230 15 + 157873769 ACACAGC-----------GGCAAAGC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170302107 26 + 172585720 ACACGGCAAGTTCTAGGTGGCAAAGC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169047835 26 - 170955103 ACACGGCAAGTTCTAGGTGGCAAAGC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8334714 26 + 10161646 ACACGGCAAGTTCTAGGTGGCAAAGC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1364424 26 + 3144229 ACACGGCAAGTTCTAGGTGGCAAAGC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96643496 26 + 98384682 ACACGGCAAGTTCTAGGTGGCAAAGC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8188066 26 - 10857215 ACACGGCAAGTTCTAGGTAGCAAAGC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15582111 26 - 23502949 ACACGGCAAGTTCTAGGTGGCAAAGC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169848557 15 + 171630274 -----------CCCCCGGGGTTAAGC i calJac3.chr4 I 10 C 0 s aotNan1.NW_018494782v1 1473662 15 - 1813869 -----------CCCCGGGGGTGAAGC i aotNan1.NW_018494782v1 I 10 C 0 s canFam3.chr1 56151373 7 + 122678785 -------------------ACTGACC i canFam3.chr1 C 0 C 0 e otoGar3.GL873575 10928459 3032 - 12073884 I e saiBol1.JH378287 1266408 19 - 2905041 I e cebCap1.NW_016107695v1 1223226 24 - 2164891 I e dasNov3.JH569188 534571 286 + 760995 I a score=98576.000000 s hg38.chr6_KB021644v2_alt 43419 11 + 185823 TAATGTAGGTG s panTro5.chr6 173509829 11 + 175400573 TAATGTAGGTG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171760186 11 + 173848474 TAATGTAGGTG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11446592 11 - 12463322 TAATGTAGGTG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156275245 11 + 157873769 TAATGTAGGTG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170302133 11 + 172585720 TAATGTAGGCG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169047861 11 - 170955103 TAATGTAGGCG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8334740 11 + 10161646 TAATGTAGGCG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1364450 11 + 3144229 TAATGTAGGCG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96643522 11 + 98384682 TAATGTAGGCA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8188092 11 - 10857215 TAATGTAGGTG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15582137 11 - 23502949 TAATGTAGGTG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169848572 11 + 171630274 TAATGTATGTG i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1223250 11 - 2164891 TAATGTACGTG i cebCap1.NW_016107695v1 I 24 C 0 s aotNan1.NW_018494782v1 1473677 11 - 1813869 TAATGTACATG i aotNan1.NW_018494782v1 C 0 C 0 s canFam3.chr1 56151380 11 + 122678785 TTATTTAGGTG i canFam3.chr1 C 0 C 0 e otoGar3.GL873575 10928459 3032 - 12073884 I e saiBol1.JH378287 1266408 19 - 2905041 I e dasNov3.JH569188 534571 286 + 760995 I a score=349565.000000 s hg38.chr6_KB021644v2_alt 43430 41 + 185823 ---------GAGATGCACCTCTCTAGATGGACAGCTGGCAATTTGCT---------GGG s panTro5.chr6 173509840 41 + 175400573 ---------GAGATGCACCTCTCTAGATGGACAGCTGGCAATTTGCT---------GGG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171760197 41 + 173848474 ---------GAGATGCACCTCTCTAGATGGACAGCTGGCAATTTGCT---------GGG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11446603 41 - 12463322 ---------GAGATGCACCTCTCTACATGGACAGCTGGAAATTTGCT---------GGG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156275256 50 + 157873769 ---------GAGATGCACCTCTCTAGATGGACAGCCGGCAGTTTGCTGGGACGTCAGGG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170302144 50 + 172585720 ---------GAGATGCACCTCTCTAGATGGACAGCCGGCAATTTGCTGGGACGTCAGGG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169047872 50 - 170955103 ---------GAGATGCACCTCTCTAGATGGACAGCCGGCAATTTGCTGGGACGTCAGGG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8334751 50 + 10161646 ---------GAGATGCACCTCTCTAGATGGACAGCTGGCAATTTGCTGGGACGTCAGGG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1364461 50 + 3144229 ---------GAGATGCACCTCTCTAGATGGACAGCCGGCAATTTGCTGGGACGTCAGGG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96643533 50 + 98384682 ---------GAGATGCACCTCTCTAGTTGGACAGCTGCCAATTTGCTGGGACGTCAGGG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8188103 50 - 10857215 ---------GAGATGCACCTCTCTAGATGGACAGCCGGCAATTTGCTGGGACGTCAGGG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15582148 49 - 23502949 ---------GAGATGCACCTCTCCAGATGAACAGCCGGCAATTTGCTGGGACGTC-GGG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169848583 41 + 171630274 ---------GAGGTGCACCTCTCTAGACCGACAGCCAGTGGTTCACT---------GGG i calJac3.chr4 C 0 I 9 s saiBol1.JH378287 1266427 41 - 2905041 ---------GAGGTGCCCCTCTCCAGACCGACAGCCAGCGCTTTGCT---------GGG i saiBol1.JH378287 I 19 I 9 s cebCap1.NW_016107695v1 1223261 41 - 2164891 ---------GAGGTGCACCTCTCTAGACCGACAGCCAGCGGTTTGCT---------GGG i cebCap1.NW_016107695v1 C 0 I 44 s aotNan1.NW_018494782v1 1473688 41 - 1813869 ---------GAGGTGCACCTCTCTAGACCGACAGCCAGCGGTTTGCT---------GGG i aotNan1.NW_018494782v1 C 0 I 9 s canFam3.chr1 56151391 41 + 122678785 CCAGTGCTTAGCATGCGC----ACAGGGGCACATCTGTCACTGAG-------------- i canFam3.chr1 C 0 C 0 e otoGar3.GL873575 10928459 3032 - 12073884 I e dasNov3.JH569188 534571 286 + 760995 I a score=156732.000000 s hg38.chr6_KB021644v2_alt 43471 36 + 185823 GCGTGGACGTCACGTTGAGTCCATTGAGACGCAGGC s panTro5.chr6 173509881 36 + 175400573 GCGTGGACGTCATGTTGAGTCCATTGAGACGCAGCC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171760238 36 + 173848474 GTGTGGACGTTATGTTGAGTCCATTGAGACGCAGCC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11446644 36 - 12463322 GTGTGGACGTCATGTTGAGTCCATTGAGACCCAGGC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156275306 36 + 157873769 GCGTGGACGTCATGTTGAGTCCACTGAGACGCAGGC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170302194 20 + 172585720 GC----------------GTCCACTGAGACGCAGTC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169047922 20 - 170955103 GC----------------GTCCACTGAGACGCAGTC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8334801 20 + 10161646 GC----------------GTCCACTGAGACGCAGTC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1364511 36 + 3144229 GCGTGGACGTCATGTTGAGTCCACTGAGACGCAGTC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96643583 36 + 98384682 GCGTGGAAGTCATGTTGAGTCCACTGAGACGCAGTC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8188153 20 - 10857215 GC----------------GTCCACTGAGACGCAGTC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15582197 36 - 23502949 GCATGGACATCATGTTGAGTCCGCTGAGACGCAGTC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169848633 35 + 171630274 ACACGGACGTCCTGTTGAGT-CACTGAGACACAGGT i calJac3.chr4 I 9 C 0 s saiBol1.JH378287 1266477 34 - 2905041 GCATGGACGTCGTGTTGAGT-CACTGAGACAT-GGT i saiBol1.JH378287 I 9 C 0 s aotNan1.NW_018494782v1 1473738 35 - 1813869 ACACGGACGTCATGTTGAGT-CACTGAGACATGGGT i aotNan1.NW_018494782v1 I 9 C 0 s canFam3.chr1 56151432 18 + 122678785 CTGTGGACG------------------GACACAAGC i canFam3.chr1 C 0 C 0 e otoGar3.GL873575 10928459 3032 - 12073884 I e cebCap1.NW_016107695v1 1223302 44 - 2164891 I e dasNov3.JH569188 534571 286 + 760995 I a score=499688.000000 s hg38.chr6_KB021644v2_alt 43507 49 + 185823 CTGC--AGGGAAGAGAAGTCGGGTCAGGGCGTTCTG-----CTCAGAGGCCTGAGG s panTro5.chr6 173509917 49 + 175400573 CTGC--AGGGAAGAGAAGTCGGGTCAGGGTGTTCTG-----CTCAgaggcctgagg i panTro5.chr6 C 0 C 0 s panPan2.chr6 171760274 49 + 173848474 CTGC--AGGGAAGAGAAGTCGGGTCAGGGCGTTCTG-----CTCAgaggcctgagg i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11446680 49 - 12463322 CTGC--AGGGAAGAGAAGTCGGGTCAGGGCGTTCTG-----CTCAGAGGCCTGAGG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156275342 49 + 157873769 CTGC--AGGGAAGAGAAGTCGGGTCAGGGCGTTCTG-----CTCAGAGGCCTGAGC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170302214 49 + 172585720 CTGC--AGGGAAGAGGGGTCGAGTCAGGGGGCTCTG-----CTCAGAGGCCTGAGG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169047942 49 - 170955103 CTGC--AGGGAAGAGGAGTCGAGTCAGGGGGCTCTG-----CTCAGAGGCCTGAGG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8334821 49 + 10161646 CTGC--AGGGAAGAGGAGTCGAGTCAGGGGGCTCTG-----CTCAGAGGCCTGAGG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1364547 49 + 3144229 CTGC--AGGGAAGAGGAGTCGAGTCAGGGGGCTCTG-----CTCAGAGGCCTGAGG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96643619 49 + 98384682 CTGC--AGGGAAGAGGAGTCGAGTCAGGGGGCTCTG-----CTCAGAGGCCTGAGG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8188173 49 - 10857215 CTGC--AGGGAAGAGGAGTCGAGTCAGGGGGCTCTG-----CTCAGAGGCCTGAGG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15582233 49 - 23502949 CTGC--AGGGAAGGGGAGTCGAGTCAGGGCGTTCTG-----CTCAGAGGCCGGAGG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169848668 49 + 171630274 CTGC--AGGGAAGAGAAGTCCGGTCAGGGTGATCTG-----CTCGGAGGCCTGAAG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1266511 49 - 2905041 CTGC--AGGGAGGAGAAGTCCGGTCAGGGTGATCTG-----CTCAGAGGCCTGAAG i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1223346 49 - 2164891 CTGC--AGGAAAGAGATATCCGGTCAGGGTGATCTG-----CTCAGAGGCCTGAAG i cebCap1.NW_016107695v1 I 44 C 0 s aotNan1.NW_018494782v1 1473773 49 - 1813869 CTGC--AGGGAGGAGAAGTCCGGTCAGGGTGATCTG-----CTCAGAGGCCTGAAG i aotNan1.NW_018494782v1 C 0 C 0 s canFam3.chr1 56151450 56 + 122678785 TTGCCGAGGGGAGGGCTGTGCTGTCAGGCTGTTCTGGGGCATTTGGGGGCCTGTGG i canFam3.chr1 C 0 I 409 e otoGar3.GL873575 10928459 3032 - 12073884 I e dasNov3.JH569188 534571 286 + 760995 I a score=71576.000000 s hg38.chr6_KB021644v2_alt 43556 9 + 185823 TGGGGAGGA s panTro5.chr6 173509966 6 + 175400573 tgggga--- i panTro5.chr6 C 0 C 0 s panPan2.chr6 171760323 6 + 173848474 tgggga--- i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11446729 9 - 12463322 TGGGGAGGA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156275391 9 + 157873769 GGGGGAGGA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170302263 9 + 172585720 TGGGGAGGA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169047991 9 - 170955103 TGGGGAGGA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8334870 9 + 10161646 TGGGGAGGA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1364596 9 + 3144229 TGGGGAGGA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96643668 8 + 98384682 T-GGGAGGA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8188222 9 - 10857215 TGGGGAGGA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15582282 9 - 23502949 TGGGGAGGA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169848717 9 + 171630274 TGGGGAGGA i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1266560 9 - 2905041 TGGGGAGGA i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1223395 9 - 2164891 TGGGGAGGA i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1473822 9 - 1813869 TGGGGAGGA i aotNan1.NW_018494782v1 C 0 M 4874 e otoGar3.GL873575 10928459 3032 - 12073884 I e dasNov3.JH569188 534571 286 + 760995 I e canFam3.chr1 56151506 409 + 122678785 I a score=19224.000000 s hg38.chr6_KB021644v2_alt 43565 5 + 185823 -AGGG--------G s gorGor5.CYUI01015032v1 11446738 5 - 12463322 -AGGG--------G i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156275400 5 + 157873769 -AGGG--------G i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170302272 13 + 172585720 -AGGGGGCTTCCAG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169048000 13 - 170955103 -AGGGGGCTTCCAG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8334879 13 + 10161646 -AGGGGGCTTCCAG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1364605 13 + 3144229 -AGGGGGCTTCCAG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96643676 13 + 98384682 -AGGGGGCTTCCAG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8188231 13 - 10857215 -AGGGGGCTTCCAG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15582291 13 - 23502949 -AGGGGGCTTCCAG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169848726 5 + 171630274 AAGGG--------- i calJac3.chr4 C 0 I 8 s saiBol1.JH378287 1266569 5 - 2905041 AAGGG--------- i saiBol1.JH378287 C 0 I 8 s cebCap1.NW_016107695v1 1223404 5 - 2164891 AAGGG--------- i cebCap1.NW_016107695v1 C 0 I 231 e otoGar3.GL873575 10928459 3032 - 12073884 I e aotNan1.NW_018494782v1 1473831 4874 - 1813869 M e dasNov3.JH569188 534571 286 + 760995 I e canFam3.chr1 56151506 409 + 122678785 I e panPan2.chr6 171760329 0 + 173848474 C e panTro5.chr6 173509972 0 + 175400573 C a score=353776.000000 s hg38.chr6_KB021644v2_alt 43570 59 + 185823 CATGGAAGGAAATGCTGGAGGTTGGAGAGTGAGTCAGGAGGAGGTTGTCTTGGGGAGCA s panTro5.chr6 173509972 56 + 175400573 ---ggaaggaagtgctggaggctggagagtgagtcgggaggAGGTTGTCTTGGGGAGCA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171760329 56 + 173848474 ---ggaaggaagtgctggaggctggagagtgagtcgggaggAGGTTGTCTTGGGGAGCA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11446743 59 - 12463322 CATGGAAGGAAATGCTGGAGGTTGGAGAGTGAGTCAGGAGGAGGTTTTCTTGGGGAGCG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156275405 59 + 157873769 CCTGGAAAGAAACGCTGGAGGCTGCAGAGTGAGTAAGGAGGAGGTTGTCTTGGGGAGCA i nomLeu3.chr3 C 0 I 45 s rheMac8.chr4 170302285 59 + 172585720 CATGGAAGGAAACGCTGGAGGCTGGAGAGTGAGTCAGGAGGAGGTTGTCTTGGGGAGCG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169048013 59 - 170955103 CATGGAAGGAAACGCTGGAGGCTGGAGAGTGAGTCAGGAGGAGGTTGTCTTGGGGGGCG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8334892 59 + 10161646 CACGGAAGGAAACGCTGGAGGCTGGAGAGTGAGTCAGGAGGAGGTTGTCTTGGGGAGCG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1364618 59 + 3144229 CATGGAAGGAAACGCTGGAGGCTGGAGAGTGAGTCAGGAGGAGGTTGTCTGGGGGAGTG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96643689 59 + 98384682 CATGGAAGGAAACGCTGGAGGCTGGAGAGTGAGTCAGGAGGAGGTTGTCTTGGGGAGTG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8188244 59 - 10857215 CATGGAAGGAAACGCTGGAGGCTGGAGAGTGAGTCAGGAGGAGGTTGTCTTGGGGAGTG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15582304 59 - 23502949 CATGGAAGGAAATGCTGGAGGCTGGAGAGTGAGTCAGGAGGAGGTTGTCTTGGGGAGTG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169848739 48 + 171630274 GAGGGAATGAAAAGCTAGA-GCTGCAGAGCGAGGCAAGAAGAGGTGGCT---------- i calJac3.chr4 I 8 C 0 s saiBol1.JH378287 1266582 46 - 2905041 GCTGGAATGAAAAGCTAGA-GCTGCAGAGCGAGGCAAG--GAGGCGTCC---------- i saiBol1.JH378287 I 8 C 0 e otoGar3.GL873575 10928459 3032 - 12073884 I e aotNan1.NW_018494782v1 1473831 4874 - 1813869 M e cebCap1.NW_016107695v1 1223409 231 - 2164891 I e dasNov3.JH569188 534571 286 + 760995 I e canFam3.chr1 56151506 409 + 122678785 I a score=82873.000000 s hg38.chr6_KB021644v2_alt 43629 18 + 185823 GTCACGGGGCCACAGGCA s panPan2.chr6 171760385 18 + 173848474 GTCACGGGGCCGCAGGCG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11446802 18 - 12463322 GTCACGGGGCCACAGGCA i gorGor5.CYUI01015032v1 C 0 I 551 s nomLeu3.chr3 156275509 18 + 157873769 GTCACGGAGCCACAGGGG i nomLeu3.chr3 I 45 C 0 s rheMac8.chr4 170302344 18 + 172585720 GTCACAGGGCCACAGGCA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169048072 18 - 170955103 GTCACAGGGCCACAGGCA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8334951 18 + 10161646 GTCACAGGGCCACAGGCA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1364677 18 + 3144229 GTCACAGGGCCACAGGCA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96643748 18 + 98384682 GTCACAGGGCCACAGGCA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8188303 18 - 10857215 GTCACAGGGCCACAGGCA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15582363 18 - 23502949 GTCATGGGGCCACAGACA i colAng1.NW_012114488v1 C 0 C 0 e otoGar3.GL873575 10928459 3032 - 12073884 I e saiBol1.JH378287 1266628 0 - 2905041 C e aotNan1.NW_018494782v1 1473831 4874 - 1813869 M e cebCap1.NW_016107695v1 1223409 231 - 2164891 I e calJac3.chr4 169848787 0 + 171630274 C e dasNov3.JH569188 534571 286 + 760995 I e canFam3.chr1 56151506 409 + 122678785 I e panTro5.chr6 173510028 0 + 175400573 C a score=239545.000000 s hg38.chr6_KB021644v2_alt 43647 52 + 185823 T---------------------------------------------CTGAGATGGGGAGCGGAGATGGGAG----------------------------------------------CGGTCACGGGGCCACAGGCATCTGAG s panPan2.chr6 171760403 52 + 173848474 T---------------------------------------------CTGAGATGGGGAGCGGAGAGGGGAG----------------------------------------------CGGTCACGGGGCCACAGGCGTCTGAG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11447371 52 - 12463322 T---------------------------------------------CTGAGATGGGGAGTGGAGAGGGGAA----------------------------------------------CGGTCACGGGGCCACAGGCGTCTGAG i gorGor5.CYUI01015032v1 I 551 C 0 s nomLeu3.chr3 156275527 52 + 157873769 T---------------------------------------------CTGAGATGGGGAGTGGAAAGGGGAG----------------------------------------------CAGTCACGGGGCCACACGCGTCTGAG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170302362 97 + 172585720 TCTGAGATGGGAATGGAGAGGGGAATGGTCACGGGGTCACACCCGCCTGAGATGGGGAGTGGAGAGGGGAG----------------------------------------------CGGTCACGGGGACACACGCATCTGAG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169048090 97 - 170955103 TCTGAGATGGGAATGGAGAGGGGAATGGTCACGGGGTCACACCCGCCTGAGATGGGGAGTGGAGAGGGGAG----------------------------------------------CGGTCACGGGGACACACGCATCTGAG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8334969 97 + 10161646 TCTgagatgggaatggagatgggaatggTCACGGGGTCACACCTGCCTGAGATGGGGAGTGGAGAGGGGAG----------------------------------------------CGGTCACGGGGACACACGCATCTGAG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1364695 143 + 3144229 TCTGAGATGGGAATGGAGAGGGGAATGGTCACGAGGCCACACCCGTCTGAGATGGGGAGTGGAGAGGGGAGCGGTCACGGGGACACACGCATCTGAGGTGGGGAGTGGAGAGGGGAACGGTCACGGGGTCACACCCGTCTGAG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96643766 52 + 98384682 T---------------------------------------------CTGAGATGGGGAGTGGAGAGGGGAG----------------------------------------------CGGTCACAGGGCCACAGGCATCTGAG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8188321 52 - 10857215 T---------------------------------------------CTGAGATGGGGAGTGGAGAGGGGAA----------------------------------------------CGGTCACGGGGTCACACCCATCTGAG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15582381 52 - 23502949 T---------------------------------------------CTGAGATGGGGAGTGGAGAGGGGAA----------------------------------------------GGGTCACGGGGCCACAGGCATCTGAG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169848787 44 + 171630274 ----------------------------------------------------TGGGGAGCGGAGAGGGG-G----------------------------------------------CGGTCGCAGGGCCACATGTGTCTGAG i calJac3.chr4 C 0 I 102 s saiBol1.JH378287 1266628 44 - 2905041 ----------------------------------------------------CGGGGAGCGGAGAGGGG-G----------------------------------------------CGGTGGCAGGGCCACAGGTGTCTGAG i saiBol1.JH378287 C 0 I 108 e otoGar3.GL873575 10928459 3032 - 12073884 I e aotNan1.NW_018494782v1 1473831 4874 - 1813869 M e cebCap1.NW_016107695v1 1223409 231 - 2164891 I e dasNov3.JH569188 534571 286 + 760995 I e canFam3.chr1 56151506 409 + 122678785 I e panTro5.chr6 173510028 0 + 175400573 C a score=79381.000000 s hg38.chr6_KB021644v2_alt 43699 19 + 185823 ATGGGAAGTGGAGAGCGGA s panPan2.chr6 171760455 19 + 173848474 ATGGGGAGCGGAGAGGGGA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11447423 18 - 12463322 ATGGGGAGTGGAGAG-GGA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156275579 19 + 157873769 ATGGGGAGCAGTGAGGGGA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170302459 19 + 172585720 GTGGGGAGTGGAGAAGGGA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169048187 19 - 170955103 GTGGGGAGTGGAGAAGGGA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8335066 19 + 10161646 GTGGGGAGTGGAGAAGGGA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1364838 19 + 3144229 ATGGGGAGTGGAGAGGGGA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96643818 19 + 98384682 ATGGGGAGTGGAGAGGGGA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8188373 19 - 10857215 ATGGGGAGTGGAGAGGGGA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15582433 19 - 23502949 ATGGGGAATGGAGAGGGGA i colAng1.NW_012114488v1 C 0 I 186 e otoGar3.GL873575 10928459 3032 - 12073884 I e saiBol1.JH378287 1266672 108 - 2905041 I e aotNan1.NW_018494782v1 1473831 4874 - 1813869 M e cebCap1.NW_016107695v1 1223409 231 - 2164891 I e calJac3.chr4 169848831 102 + 171630274 I e dasNov3.JH569188 534571 286 + 760995 I e canFam3.chr1 56151506 409 + 122678785 I e panTro5.chr6 173510028 0 + 175400573 C a score=319610.000000 s hg38.chr6_KB021644v2_alt 43718 79 + 185823 GCACTCACAGGGCCACAGGCATCTGAGATGGGGAGTGGAGAGGGGAGCGGTCAC-GGGGCCACAGGCGTCTGAGATGGGG s panPan2.chr6 171760474 80 + 173848474 GCACTCACGGGGCCACAGGCGTCTGAGATGGGGAGTGGAGAGGGGAACAGTCACAGGGGCCACAGGCGTCTGAGATGGGG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11447441 79 - 12463322 GCGGTCACGGGGCCACAGGCGTCTGAGATGGGGAGTGGAGAGGGGAGCGGTCAC-GGGGCCACAGGCCTCTGAGATGGGG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156275598 79 + 157873769 GCAGTCACAGGGCCACACGGGTCTGAGATGGGGAGTGGAGAGGGGAGTGGTCAC-AGGGCCACACGCGTCTGAGATGGGG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170302478 79 + 172585720 AGGGTCACGGGGTCACATGCGTCTCAGATGGGGAGTGGAGAGGGGAGTGGTCAC-AGGGCCACAGGCATCTGAGGTGGGG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169048206 79 - 170955103 AGGGTCACGGGGTCACATGCGTCTCAGATGGGGAGTGGAGAGGGGAGTGGTCAC-AGGGCCACAGGCATCTGAGGTGGGG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8335085 79 + 10161646 AGGGTCACGGGGTCACATGCGTCTCAGATGGGGAGTGGAGAGGGGAGTGGTCAC-AGGGCCACAGGCATCTGAGGTGGGG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1364857 79 + 3144229 ATGGTCACAGGGCCACAGGCATCTGAGATGGGGAGTGGAGAGGGGAACGGTCAC-GGGGTCACACCCGTCTGAGATGGGG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96643837 79 + 98384682 GCGGTCACAGGGTCACATCCATCTGAGATGGGGAGTGGAGAGGGGAGCGGTCAC-GGGGTCACACCCGTCTGAGATGGGG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8188392 79 - 10857215 GCGGTCACGGGGACATACGCATCTGAGGTGGGGAGTGGAGAAGGGAAGGGTCAC-GGGGTCACATGCGTCTCAGATGGAG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15582638 79 - 23502949 GCAGTCACAGGGCCACCAGCATCTGAGATGGGGAGTGGAGAGGGGAGTGGTTAC-AGGGCCACACATGTCTGAGGTGGGG i colAng1.NW_012114488v1 I 186 C 0 e otoGar3.GL873575 10928459 3032 - 12073884 I e saiBol1.JH378287 1266672 108 - 2905041 I e aotNan1.NW_018494782v1 1473831 4874 - 1813869 M e cebCap1.NW_016107695v1 1223409 231 - 2164891 I e calJac3.chr4 169848831 102 + 171630274 I e dasNov3.JH569188 534571 286 + 760995 I e canFam3.chr1 56151506 409 + 122678785 I e panTro5.chr6 173510028 0 + 175400573 C a score=75126.000000 s hg38.chr6_KB021644v2_alt 43797 16 + 185823 AGTGGAGAGGGGAACG s panPan2.chr6 171760554 16 + 173848474 AGTGGAGAGGGGAGCA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11447520 16 - 12463322 AGCGGAGAGGGGAACG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156275677 16 + 157873769 AGTGGAGAGGGGAGCG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170302557 16 + 172585720 AGTGGAGAGGGGAGCG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169048285 16 - 170955103 AGTGGAGAGGGGAGCG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8335164 16 + 10161646 AGTGGTGAGGGGAGCG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1364936 16 + 3144229 AGTGGAGAGGGGAGCG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96643916 16 + 98384682 AGTGCAGAGGGGAGCG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8188471 16 - 10857215 AGTGGAGAGGGGAGCG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15582717 16 - 23502949 AGTGGAGAGGGGAGCA i colAng1.NW_012114488v1 C 0 C 0 s dasNov3.JH569188 534857 15 + 760995 AGTGAGGAGTGTTAC- i dasNov3.JH569188 I 286 C 0 e otoGar3.GL873575 10928459 3032 - 12073884 I e saiBol1.JH378287 1266672 108 - 2905041 I e aotNan1.NW_018494782v1 1473831 4874 - 1813869 M e cebCap1.NW_016107695v1 1223409 231 - 2164891 I e calJac3.chr4 169848831 102 + 171630274 I e canFam3.chr1 56151506 409 + 122678785 I e panTro5.chr6 173510028 0 + 175400573 C a score=-10916.000000 s hg38.chr6_KB021644v2_alt 43813 7 + 185823 -----GTCACG--G s panTro5.chr6 173510028 7 + 175400573 -----GTCACG--G i panTro5.chr6 C 0 C 0 s panPan2.chr6 171760570 7 + 173848474 -----GTCACG--G i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11447536 7 - 12463322 -----GTCACG--G i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156275693 7 + 157873769 -----GTCACA--G i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170302573 6 + 172585720 -----GTCAAG--- i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169048301 6 - 170955103 -----GTCAAG--- i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8335180 6 + 10161646 -----GTCAAG--- i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1364952 7 + 3144229 -----GTCACGG-- i cerAty1.NW_012002071v1 C 0 I 183 s chlSab2.chr13 96643932 7 + 98384682 -----GTCACA-G- i chlSab2.chr13 C 0 I 92 s manLeu1.NW_012106474v1 8188487 7 - 10857215 -----GTCGCA-G- i manLeu1.NW_012106474v1 C 0 I 46 s colAng1.NW_012114488v1 15582733 6 - 23502949 -----GTCAAG--- i colAng1.NW_012114488v1 C 0 C 0 s dasNov3.JH569188 534872 6 + 760995 CTACAG-------- i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10928459 3032 - 12073884 I e saiBol1.JH378287 1266672 108 - 2905041 I e aotNan1.NW_018494782v1 1473831 4874 - 1813869 M e cebCap1.NW_016107695v1 1223409 231 - 2164891 I e calJac3.chr4 169848831 102 + 171630274 I e canFam3.chr1 56151506 409 + 122678785 I a score=92155.000000 s hg38.chr6_KB021644v2_alt 43820 18 + 185823 GGCCACAGGCGTCTGAGA s panTro5.chr6 173510035 18 + 175400573 GGCCGCAGGCGTCTGAGA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171760577 18 + 173848474 GGCCGCAGGCGTCTGAGA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11447543 18 - 12463322 GGCCACAGGCGTCTGAGA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156275700 18 + 157873769 GGCCACAGGGGTCTAAGA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170302579 18 + 172585720 CGCCACAGGTGTCTGAGA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169048307 18 - 170955103 CGCCACAGGTGTCTGAGA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8335186 18 + 10161646 CGCCACAGGTGTCTGAGA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1365142 18 + 3144229 GGCCACAGGTGTCTGAGA i cerAty1.NW_012002071v1 I 183 C 0 s chlSab2.chr13 96644031 18 + 98384682 GGTCACACGCGTCTGAGA i chlSab2.chr13 I 92 I 160 s manLeu1.NW_012106474v1 8188540 18 - 10857215 ggtcacacgcgtctgagg i manLeu1.NW_012106474v1 I 46 I 45 s colAng1.NW_012114488v1 15582739 18 - 23502949 GGCCACAGGTATCTGAGA i colAng1.NW_012114488v1 C 0 C 0 s dasNov3.JH569188 534878 18 + 760995 AGCCAAATGTTTCCATGG i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10928459 3032 - 12073884 I e saiBol1.JH378287 1266672 108 - 2905041 I e aotNan1.NW_018494782v1 1473831 4874 - 1813869 M e cebCap1.NW_016107695v1 1223409 231 - 2164891 I e calJac3.chr4 169848831 102 + 171630274 I e canFam3.chr1 56151506 409 + 122678785 I a score=48141.000000 s hg38.chr6_KB021644v2_alt 43838 10 + 185823 GACGGGGGAG s panTro5.chr6 173510053 10 + 175400573 GACGGGGGAG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171760595 10 + 173848474 GACGGGGGAG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11447561 10 - 12463322 GACGGGGGAG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156275718 7 + 157873769 ---TGGGGAG i nomLeu3.chr3 C 0 I 200 s rheMac8.chr4 170302597 10 + 172585720 GATGGGGGAG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169048325 10 - 170955103 GATGGGGGAG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8335204 10 + 10161646 GATGGGGGAG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1365160 10 + 3144229 GATGGGGGAG i cerAty1.NW_012002071v1 C 0 C 0 s manLeu1.NW_012106474v1 8188603 10 - 10857215 GATGGGGGAG i manLeu1.NW_012106474v1 I 45 C 0 s colAng1.NW_012114488v1 15582757 10 - 23502949 GATGGGGGAG i colAng1.NW_012114488v1 C 0 C 0 s dasNov3.JH569188 534896 10 + 760995 GGTCAAGGAG i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10928459 3032 - 12073884 I e saiBol1.JH378287 1266672 108 - 2905041 I e aotNan1.NW_018494782v1 1473831 4874 - 1813869 M e cebCap1.NW_016107695v1 1223409 231 - 2164891 I e calJac3.chr4 169848831 102 + 171630274 I e canFam3.chr1 56151506 409 + 122678785 I e chlSab2.chr13 96644049 160 + 98384682 I a score=42437.000000 s hg38.chr6_KB021644v2_alt 43848 14 + 185823 CACGAGGCCCAAG--A s panTro5.chr6 173510063 14 + 175400573 CACGAGGCCCGAG--A i panTro5.chr6 C 0 C 0 s panPan2.chr6 171760605 14 + 173848474 CACGAGGCCCGAG--A i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11447571 14 - 12463322 CACGAGGCCCGAG--A i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156275925 14 + 157873769 CACGAGGCCTGAG--A i nomLeu3.chr3 I 200 C 0 s rheMac8.chr4 170302607 13 + 172585720 CACGAGCCCTGAG--- i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169048335 13 - 170955103 CACGAGCCCTGAG--- i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8335214 13 + 10161646 CACGAGCCCTGAG--- i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1365170 13 + 3144229 CACGAGCCCTGAG--- i cerAty1.NW_012002071v1 C 0 C 0 s manLeu1.NW_012106474v1 8188613 14 - 10857215 CACGAGCCCTGAGA-- i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15582767 14 - 23502949 CACGAGGCCCGAG-A- i colAng1.NW_012114488v1 C 0 C 0 s dasNov3.JH569188 534906 14 + 760995 GATGAGGCCTGAG--A i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10928459 3032 - 12073884 I e saiBol1.JH378287 1266672 108 - 2905041 I e aotNan1.NW_018494782v1 1473831 4874 - 1813869 M e cebCap1.NW_016107695v1 1223409 231 - 2164891 I e calJac3.chr4 169848831 102 + 171630274 I e canFam3.chr1 56151506 409 + 122678785 I e chlSab2.chr13 96644049 160 + 98384682 I a score=415809.000000 s hg38.chr6_KB021644v2_alt 43862 72 + 185823 AGGCCGATGGGTTTAGGGTGGGAGGAGCTCCCTCTGGAGATCAGTGTTTCCACAAGGTGGTAGGGGCGGAGG s panTro5.chr6 173510077 72 + 175400573 AGGCCGACGGGTTTAGGGTGCGAGGAGCTCCCTCTGGAGATCAGTGTTTCCACAAGGTGGTAGGGGTGGAGG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171760619 72 + 173848474 AGGCCGACGGGTTTAGGGTGCGAGGAGCTCCCTCTGGAGATCAGTGTTTCCACAAGGTAGTAGGGGTGGAGG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11447585 72 - 12463322 AGGCCGACGGGTTTAGGGTGCGAGGAGCTCCCTCTGGAGATCAGTGTTTCCACAAGGTGGTAGGGGCAGAAG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156275939 72 + 157873769 AGGCCGACGGGTTTAGGGTGCAAGGAGTTCCCTCGGGAGATCAGTGTTTCCACGGGGTGGTAAGGGCGGAGG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170302620 72 + 172585720 AGGCCAATGGGTTTAGGGTGCAAGGAGTTCCCTCGGGAGCTCAGTGTTTCCACCGGGTGGTAGAGGCGGAGG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169048348 72 - 170955103 AGGCCAATGGGTTTAGGGTGCAAGGAGTTCCCTCGGGAGCTCAGTGTTTCCACCGGGTGGTAGAGGCGGAGG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8335227 72 + 10161646 AGGCCAATGGGTTTAGGGTGCAAGGAGTTCCCTCGGGAGCTCAGTGTTTCCACCGGGTGGTAGAGGCGGAGG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1365183 72 + 3144229 AGGCCGATGGGTTTAGGGTGCAAGGAGTTCCCTCGGGAGCTCAGTGTTTCCACCGGGTGGTAGAGGCAGAGG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96644209 72 + 98384682 AGGCCGATGGGTTTAGGGTGCAAGGAGTTCCCTCGGGAGCTCAGTGTTTCCACCGGGTGGTAGAGGTGGAGG i chlSab2.chr13 I 160 C 0 s manLeu1.NW_012106474v1 8188627 71 - 10857215 -GGCCGATGGGTTTAGGGTGCAAGGAGTTCCCTCGGGAGCTCAGTGTTTCCACCGGGTGGTAGAGGCGGAGG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15582781 70 - 23502949 --GGCAATGGGTTTAGGGTGCAAGGAGTTCCCTCAGGAGCTCAGTGTTTCCACTGGGTGGTAGAGGCGGAGG i colAng1.NW_012114488v1 C 0 C 0 s dasNov3.JH569188 534920 71 + 760995 GAGCCAATAGATTCAGAATTTAAGGTGTCCACTTGGGAGATATCAGTTTCCAT-AGATGTTAAGGGTAGAAG i dasNov3.JH569188 C 0 I 278 e otoGar3.GL873575 10928459 3032 - 12073884 I e saiBol1.JH378287 1266672 108 - 2905041 I e aotNan1.NW_018494782v1 1473831 4874 - 1813869 M e cebCap1.NW_016107695v1 1223409 231 - 2164891 I e calJac3.chr4 169848831 102 + 171630274 I e canFam3.chr1 56151506 409 + 122678785 I a score=9581.000000 s hg38.chr6_KB021644v2_alt 43934 2 + 185823 AA s panTro5.chr6 173510149 2 + 175400573 AG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171760691 2 + 173848474 AG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11447657 2 - 12463322 AA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156276011 2 + 157873769 AA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170302692 2 + 172585720 AA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169048420 2 - 170955103 AA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8335299 2 + 10161646 AA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1365255 2 + 3144229 AA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96644281 2 + 98384682 AA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8188698 2 - 10857215 AA i manLeu1.NW_012106474v1 C 0 I 13 s colAng1.NW_012114488v1 15582851 2 - 23502949 AA i colAng1.NW_012114488v1 C 0 C 0 e otoGar3.GL873575 10928459 3032 - 12073884 I e saiBol1.JH378287 1266672 108 - 2905041 I e aotNan1.NW_018494782v1 1473831 4874 - 1813869 M e cebCap1.NW_016107695v1 1223409 231 - 2164891 I e calJac3.chr4 169848831 102 + 171630274 I e dasNov3.JH569188 534991 278 + 760995 I e canFam3.chr1 56151506 409 + 122678785 I a score=39278.000000 s hg38.chr6_KB021644v2_alt 43936 9 + 185823 GCAGGATGG s panTro5.chr6 173510151 9 + 175400573 GCAGGATGG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171760693 9 + 173848474 GCAGGATGG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11447659 9 - 12463322 GCAGGATGG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156276013 9 + 157873769 GCAGAATGG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170302694 9 + 172585720 ACAGGGTGG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169048422 9 - 170955103 ACAGGGTGG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8335301 9 + 10161646 ACAGGGTGG i macNem1.NW_012011000v1 C 0 I 4 s cerAty1.NW_012002071v1 1365257 9 + 3144229 ACAGGATGG i cerAty1.NW_012002071v1 C 0 I 4 s chlSab2.chr13 96644283 9 + 98384682 ACAGGGTGG i chlSab2.chr13 C 0 I 4 s colAng1.NW_012114488v1 15582853 9 - 23502949 ACAGGATGG i colAng1.NW_012114488v1 C 0 C 0 e otoGar3.GL873575 10928459 3032 - 12073884 I e saiBol1.JH378287 1266672 108 - 2905041 I e aotNan1.NW_018494782v1 1473831 4874 - 1813869 M e cebCap1.NW_016107695v1 1223409 231 - 2164891 I e calJac3.chr4 169848831 102 + 171630274 I e dasNov3.JH569188 534991 278 + 760995 I e canFam3.chr1 56151506 409 + 122678785 I e manLeu1.NW_012106474v1 8188700 13 - 10857215 I a score=650.000000 s hg38.chr6_KB021644v2_alt 43945 1 + 185823 G s panTro5.chr6 173510160 1 + 175400573 G i panTro5.chr6 C 0 C 0 s panPan2.chr6 171760702 1 + 173848474 G i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11447668 1 - 12463322 G i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156276022 1 + 157873769 A i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170302703 1 + 172585720 A i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169048431 1 - 170955103 A i macFas5.chr4 C 0 C 0 s colAng1.NW_012114488v1 15582862 1 - 23502949 A i colAng1.NW_012114488v1 C 0 C 0 e otoGar3.GL873575 10928459 3032 - 12073884 I e saiBol1.JH378287 1266672 108 - 2905041 I e aotNan1.NW_018494782v1 1473831 4874 - 1813869 M e cebCap1.NW_016107695v1 1223409 231 - 2164891 I e calJac3.chr4 169848831 102 + 171630274 I e dasNov3.JH569188 534991 278 + 760995 I e canFam3.chr1 56151506 409 + 122678785 I e chlSab2.chr13 96644292 4 + 98384682 I e cerAty1.NW_012002071v1 1365266 4 + 3144229 I e manLeu1.NW_012106474v1 8188700 13 - 10857215 I e macNem1.NW_012011000v1 8335310 4 + 10161646 I a score=2565.000000 s hg38.chr6_KB021644v2_alt 43946 3 + 185823 TGC s panTro5.chr6 173510161 3 + 175400573 TGC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171760703 3 + 173848474 TGC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11447669 3 - 12463322 TGC i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170302704 3 + 172585720 TGG i rheMac8.chr4 C 0 C 0 s colAng1.NW_012114488v1 15582863 3 - 23502949 TGG i colAng1.NW_012114488v1 C 0 C 0 e otoGar3.GL873575 10928459 3032 - 12073884 I e saiBol1.JH378287 1266672 108 - 2905041 I e aotNan1.NW_018494782v1 1473831 4874 - 1813869 M e cebCap1.NW_016107695v1 1223409 231 - 2164891 I e calJac3.chr4 169848831 102 + 171630274 I e dasNov3.JH569188 534991 278 + 760995 I e canFam3.chr1 56151506 409 + 122678785 I e chlSab2.chr13 96644292 4 + 98384682 I e cerAty1.NW_012002071v1 1365266 4 + 3144229 I e nomLeu3.chr3 156276023 0 + 157873769 C e manLeu1.NW_012106474v1 8188700 13 - 10857215 I e macNem1.NW_012011000v1 8335310 4 + 10161646 I e macFas5.chr4 169048432 0 - 170955103 C a score=0.000000 s hg38.chr6_KB021644v2_alt 43949 31409 + 185823 Tgatgcggtgctgatgaggacgcggtgctgatgaggatgcggtgctgatgcggatgcggtgctgatgcggatgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgcggatgcggtgctgatgcggatgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgcggatgcggtgctgatgaggacgcggtgctgatgaggacgcggtgctgatgaggatgcggtgctgatgaggacgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgcggatgcggtgctgatgaggacgcggtgctgatgaggacgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgcggatgcggtgctgatgaggacgcggtgctgatgaggacgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgaggaagcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgaggacgcggtgctgatgaggacgcggtgctgatgaggatgcggtgctgatgaggacgcggtgctgatgaggacgcggtgctgatgaggatgcggtgctgatgaggacgcggtgctgatgaggatgcggtgctgatgcggatgcggtgctgatgaggatgcggtgctgatgcggacgcggtgctgatgcggatgcggtgctgatgaggatgcggtgctgatgcggacgcggtgctgatgaggacgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgaggacgcggtgctgatgcggacgcggtgctgatgaggatgcggtgctgatgaggacgcggtgctgatgaggacagggtgctgatgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgaggacgcggtgctgatgaggacgcggtgctgatgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgcggtgctgatgaggacgcggtgctgatgcggtgctgatgaggacgcggtgctgatgaggacgcggtgctgatgaggacgcggtgctgatgaggacgcggtgctgatgaggacgcggtgctgatgcggtgctgatgaggatgcggtgctgatgaggacgcggtgctgatgcggtgctgatgaggacgcggtgctgatgaggacgcggtgctgatgaggacgcggtgctgatgaggatgcggtgctgatgaggacgcggtgctgatgaggacgcggtgctgatgaggacgcggtgctgatgaggacgcagtgctgatgcagtgctgatgaggatgcggtgctgatgaggacgcggtgctgatgcggtgctgatgaggacgcggtgctgatgaggacgcggtgctgatgaggacgcggtgctgatgaggacgcggtgctgatgaggacgcggtgctgatgcgatgctgatgcggtgctgatgcggatgcggtgctgatgcggatgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgcggatgcggtgctgatgaggacgcggtgctgatgaggacgcggtgctgatgaggatgcggtgctgatgaggacgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgcggatgcggtgctgatgaggacgcggtgctgatgaggacgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgcggatgcggtgctgatgaggacgcggtgctgatgaggacgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgcggatgcggtgctgatgaggacgcggtgctgatgaggacgcggtgctgatgaggatgcggtgctgatgaggacgcggtgctgatgaggacgcggtgctgatgaggatgcggtgctgatgaggacgcggtgctgatgaggatgcggtgctgatgcggatgcggtgctgatgaggatgcggtgctgatgcggacgcggtgctgatgcggatgcggtgctgatgaggatgcggtgctgatgcggacgcggtgctgatgcggatgcgatgctgatgcggacccggtgctgatgcggacccggtgctgatgcggatccggtgctgatgcggatgcggtgctgatgcggacccggtgctgatgaggacgcggtgctgatgcggatgcggtgctgatgcggatgcggtgctgatgcggatgcggtgctgatgcggacgcggtgctgatgcggatgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgaggacgcggtgctgatgcggatgcggtgctgatgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgaggacgcggtgctgatgcggacgcggtgctgatgaggatgcggtgctgatgaggacgcggtgctgatgagggatgcggtgctgatgaggatgcggtgctgatgcggatgcggtgctgatgaggacgcggtgctgatgaggacgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgcggatgcggtgctgatgaggacgcggtgctgatgaggacgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgcggatgcggtgctgatgaggacgcggtgctgatgaggacgcggtgctgatgaggatgcggtgctgatgaggacgcggtgctgatgaggacgcggtgctgatgaggatgcggtgctgatgaggacgcggtgctgatgaggatgcggtgctgatgcggatgcggtgctgatgaggatgcggtgctgatgcggacgcggtgctgatgcggatgcggtgctgatgaggatgcggtgctgatgcggacgcggtgctgatgaggacgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgcggacgcggtgctgatgcggatgcggtgctgatgaggatgcggtgctgatgcggacgcggtgctgatgcggatgcggtgctgatgaggatgcggtgctgatgaggacgcggtgctgatgaggacgcggtgctgaatgaggatgcggtgctgatgaggacgcggtgctgatgaggatgcggtgctgatgcggatgcggtgctgatgaggacgcggtgctgatgcggacgcggtgctgatgcggatgcggtgctgatgaggacgcggtgctgatgaggacgcggtgctgatgaggatgcggtgctgatgaggacgcggtgctgatgcggacgcggtgctgatgcggatgcggtgctgatgaggacgcggtgctgatgcggacgcggtgctgatgcggatgcggtgctgatgaggatgcggtgctgatgcggacgcggtgctgatgaggacgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgcggacgcggtgctgatgcggatgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgcggatgccggtgctgatgaggacgcggtgctgatgagggacgccgttgctgatgaggatgccggtgctgatgaggatgcggtgctgatgagggacgcggtgctgatgaggatgcgggtgctgatgaggacgcggtgctgatgaggatgcggtgctgatgcggatgcggtgctgatgaggatgcggtgctgatgcggacgcggtgctgatgcggatgcggtgctgatgaggatgcggtgctgatgcggacgcggtgctgatgaggacgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgcggacgcggtgctgatgcggatgcggtgctgatgaggatgcggtgctgatgcggacgcggtgctgatgcggatgcggtgctgatgaggatgcggtgctgatgaggacgcggtgctgatgaggacgcggtgctgatgaggatgcggtgctgatgaggacgcggtgctgatgaggacgcggtgctgatgcggatgcggtgctgatgaggacgcggtgctgatgcggacgcggtgctgatgcggatgcggtgctgatgaggacgcggtgctgatgaggacgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgcggacgcggtgctgatgcggatgcggtgctgatgaggacgcggtgctgatgcggacgcggtgctgatgcggatgcggtgctgatgaggatgcggtgctgatgcggacgcggtgctgatgaggacgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgcggatgcggtgctgatgaggacgcggt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tgaggatgcggtgctgatgaggatgcggtgctgatgcggtgctgatgaggacgcggtgctgatgcggtgctgatgaggacgcggtgctgatgaggacgcggtgctgatgaggacgcggtgctgatgaggatgcggtgctgatgaggacgcggtgctgatgaggatgcggtgctgatgaggacgcggtgctgatgaggacgcggtgctgatgaggacgcggtgctgatgcggtgctgatgaggatgcggtgctgatgaggacgcggtgctgatgcggtgctgatgaggacgcggtgctgatgaggacgcggtgctgatgaggacgcggtgctgatgaggacgcggtgctgatgcagtgctgatgaggatgcggtgctgatgaggacgcggtgctgatgcggtgctgatgaggacgcggtgctgatgaggacgcggtgctgatgaggacgcggtgctgatgaggacgcggtgctgatgcgatgctgatgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgaggacgcggtgctgatgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgcggtgctgatgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgcggtgctgatgcggtgctgatgaggacgcggtgctgatgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgcggtgctgatgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgcggtgctgatgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgaggatgcggtgctgatgaggacgcggtgctgatgaggacgcggtgctgatgaggacgcagtgctgatgaggacgcggtgctgatgcggtgctgatgaggacgcggtgctgatgaggacgcggtgctgatgaggacgcggtgctgatgcggtgctgatgaggacgcggtgctgatgcggtgctgatgaggacgcggtgctgatgaggacgcggtgctgatgaggacgcggtgctgatgaggacgcggtgctgatgcggtgctgatgaggacgcggtgctgatgcggTGCTGATGAGGACGCGGTGCTGATGAGGACAGGGTGCTGATGAGGACGCGGTGCTGATGAGGACAGGGTGCTGATGAGGACGCGGTGCCGATGAGGACAGGGTGCTGATGAGGACGCGGTGCCGATGAGGACAGGGTGCTGATGAGGACGCGGTGCCGATGAGGACGCGGTGCTGATGAGGACAGGGTGCTGATGAGGACGCGGTGCTGATGAGGACGCGGTGCTGATGCGGTGCTGATGAGGACGCGGTGCTGATGAGGACACGGTGCTGATGAGGACAGGGTGCTGATGAGGACGCGGTGCTGATGCGGTGCTGATGAGGACAGGGTGCTGATGAGGACGCGGTGCCGATGAGGACGCGGTGCCGATGAGGACGCGGTGCCGATGAGGACGCGGTGCTGATGAGGACGCGGTGCTGATGACGCGGTGCCGATGAGGACAGGGTGCTGATGAGGACGCGGTGCCGATGAGGACGCGGTGCTGATGAGGACAGGGTGCTGATGAGGACGCGGTGCTGATGAGGACGCGGTGCTGATGCGGTGCTGATGAGGACGCGGTGCTGATGAGGACGCGGTGCTGATGAGGACAGGGTGCTGATGAGGACGCGGTGCCGATGAGGACGCGGTGCCGATGAGGACGCGGTGCCGATGAGGACGCGGTGCCGATGAGGACGCGGTGCTGATGACGCGGTGCCGATGAGGACGCGGTGCCGATGAGGACGCGGTGCCGATGAGGACGCGGTGCCGATGAGGACGCGGTGCTGATGCGGTGCTGATGAGGACGCGGTGCCGATGAGGACGCGGTGCCGATGAGGACGCGGTGCTGATGAGGACGCGGTGCTGATGAGGACGCGGTGCTGATGAGGACGCGGTGCTGATGAGGACGCGGTGCTGATGCGGTGCTGATGAGGACGCGGTGCTGATGCGGTGCTGATGAGGATGCGGTGCTGATGAGGACGCGGTGCTGATGAGGACGCGGTGCTGATGCGGATGCCGCGCTGATGAGGACGCGGTGCTGATGCGGTGCTGATGAGGACGCGGTGCTGATGAGGACGCGGTGCTGATGAGGACGCGGTGCTGATGAGGACGCGGTGCTGATGCGGTGCTGATGAGGACGCGGTGCTGATGCGGTGCTGATGAGGACGCGGTGCTGATGAGGACAGGGTGCTGATGAGGACGCGGTGCTGATGAGGACAGGGTGCTGATGAGGACGCGGTGCCGATGAGGACAGGGTGCTGATGAGGACGCGGTGCCGATGAGGACAGGGTGCTGATGAGGACGCGGTGCCGATGAGGACGCGGTGCTGATGAGGACAGGGTGCTGATGAGGACGCGGTGCTGATGAGGACGCGGTGCTGATGCGGTGCTGATGAGGACGCGGTGCTGATGAGGACGCGGTGCTGATGAGGACAGGGTGCTGATGAGGACGCGGTGCTGATGCGGTGCTGATGAGGACAGGGTGCTGATGAGGACGCGGTGCTGATGAGGACGCGGTGCTGATGAGGACGCGGTGCTGATGAGGACAGGGTGCTGATGAGGACGCGGTGCCGATGAGGACAGGGTGCTGATGAGGACGCGGTGCCGATGAGGACAGGGTGCTGATGAGGACGCGGTGCCGATGAGGACAGGGTGCCGATGAGGACGCGGTGCCGATGAGGACGCGGTGCTGATGAGGACAGGGTGCTGATGAGGACGCGGTGCTGATGAGGACGCGGTGCTGATGCGGTGCTGATGAGGACGCGGTGCTGATGAGGACGCGGTGCTGATGAGGACAGGGTGCTGATGAGGACGCGGTGCTGATGCGGTGCTGATGAGGACAGGGTGCTGATGAGGACGTGGTGCCGATGACGTGGTGCCGATGAGGACGCGGTGCCGATGAGGACGCGGTGCCGATGAGGACGCGGTGCCGATGAGGACGCGGTGCTGATGACGCGGTGCCGATGAGGACAGGGTGCTGATGAGGACGCGGTGCCGATGAGGACGCGGTGCCGATGAGGACGCGGTGCTGATGAGGACGCGGTGCTGATGAGGACGCGGTGCTGATGAGGACAGGGTGCTGATGAGGACGCGGTGCTGATGCGGTGCTGATGAGGACGCGGTGCTGATGAGGACGCGGTGCTGATGAGGACGCGGTGCTGATGAGGACGCGGTGCTGATGCGGTGCTGATGAGGACGCGGTGCTGATGCGGTGCTGATGAGGACGCGGTGCTGATGAGGACGCGGTGCTGATGACGCGGTGCTGATGAGGACAGGGTGCTGATGAGGACACGGTGCTGATGAGGACAGGGTGCCGATGAGGACGCGGTGCCGATGAGGACAGGGTGCCGATGAGGACGCGGTGCCGATGAGGACAGGGTGCCGATGAGGACGCGGTGCCGATGAGGACGCGGTGCTGATGAGGACGCGGTGCTGATGAGGACGCGGTGCTGATGAGGACGCGGTGCTGATGCGGTGCTGATGAGGACGCGGTGCTGATGCGGTGCTGATGAGGATGCGGTGCTGATGAGGACGCGGTGCTGATGAGGACGCGGTGCTGATGAGGACAGGGTGCTGATGAGGACGCGGTGCTGATGCGGTGCTGATGTGGACGCGGTCCTGATGAGGACGCGGTGCTGATGAGGACGCGGTGCTGATGAGGACGCGGTGCTGATGCGGTGCTGATGAGGACGCGGTGCTGATGCGGTGCTGATGAGGACGCGGTGCTGATGAGGACGCGGTGCTGATGAGGACGCGGTGCTGATGAGGACAGGGTGCTGATGAGGACACGGTGCTGATGAGGACAGGGTGCTGATGAGGACGCGGTGCTGATGAGGACAGGGTGCCGATGAGGACGCGGTGCCGATGAGGACAGGGTGCTGATGAGGACGCGGTGCCGATGAGGACGCGGTGCTGATGAGGACAGGGTGCTGATGAGGACGCGGTGCTGATGAGGACGCGGTGCTGATGCGGTGCTGATGAGGACGCGGTGCTGATGAGGACGCGGTGCTGATGAGGACAGGGTGCTGATGAGGACGCGGTGCTGATGCGGTGCTGATGAGGACGCGGTGCTGATGAGGAGCCGGTGCCTGATGCGGACGCGGTGCTGATGCGGATGCGGTGCTGATGAGGATGCGGTGCTGATGCGGACGCGGTGCTGATGAGGACGCGGTGCTGATGAGGATGCGGTGCTGATGAGGATGCGGTGCTGATGAGGATGCGGTGCTGATGCGGACGCGGTGCTGATGCGGATGCGGTGCTGATGAGGATGCGGTGCTGATGAGGATGCGGTGCTGATGAGGATGCGGTGCTGATGAGGATGCGGTGCTGATGAGGACGCGGTGCTGATGAGGACGGGGTGCTGATGCGGTGCTGATGAGGATGCGGTGCTGATGAGGATGCGGTGCTGATGAGGATGCGGTGCTGATGAGGATGCGGTGCTGATGAGGACGCGGTGCTGATGCGGACGCGGTGCTGATGAGGATGCGGTGCTGATGAGGACGCGGTGCTGATGAGGACAGGGTGCTGATGCGGTGCTGATGAGGATGCGGTGCTGATGAGGATGCGGTGCTGATGAGGATGCGGTGCTGATGAGGATGCGGTGCTGATGAGGACGCGGTGCTGATGAGGACGCGGTGCTGATGCGGTGCTGATGAGGATGCGGTGCTGATGAGGACGCGGTGCTGATGAGGACGCGGTGCTGATGAGGACAGGGTGCTGATGAGGACGCGGTGCTGATGCGGTGCTGATGTGGACGCGGTCCTGATGAGGACGCGGTGCTGATGAGGACGCGGTGCTGATGAGGACGCGGTGCTGATGCGGTGCTGATGAGGACGCGGTGCTGATGCGGTGCTGATGAGGACGCGGTGCTGATGAGGACGCGGTGCTGATGAGGACGCGGTGCTGATGAGGACAGGGTGCTGATGAGGACACGGTGCTGATGAGGACAGGGTGCTGATGAGGACGCGGTGCTGATGAGGACAGGGTGCCGATGAGGACGCGGTGCCGATGAGGACAGGGTGCTGATGAGGACGCGGTGCCGATGAGGACGCGGTGCTGATGAGGACAGGGTGCTGATGAGGACGCGGTGCTGATGAGGACGCGGTGCTGATGCGGTGCTGATGAGGACGCGGTGCTGATGAGGACGCGGTGCTGATGAGGACAGGGTGCTGATGAGGACGCGGTGCTGATGCGGTGCTGATGAGGACGCGGTGCTGATGAGGACGCGGTGCTGATGAGGACGCGGTGCTGATGAGGACGCGGTGCTGATGCGGTGCTGATGAGGACGCGGTGCTGATGAGGACGCGGTGCTGATGAGGACGCGGTGCTGATGAGGACGCGGTGCCGATGAGGACAGGGTGCTGATGAGGACGCGGTGCCGATGAGGACAGGGTGCTGATGAGGACGCGGTGCCGATGAGGACAGGGTGCTGATGAGGACGCGGTGCCGATGAGGACGCGGTGCTGATGAGGACAGGGTGCTGATGAGGACGCGGTGCTGATGAGGACGCGGTGCTGATGCGGTGCTGATGAGGACGCGGTGCTGATGAGGACACGGTGCTGATGAGGACAGGGTGCTGATGAGGACGCGGTGCTGATGCGGTGCTGATGAGGACAGGGTGCTGATGAGGACGCGGTGCCGATGAGGACGCGGTGCCGATGAGGACGCGGTGCCGATGAGGACGCGGTGCTGATGAGGACGCGGTGCTGATGACGCGGTGCCGATGAGGACAGGGTGCTGATGAGGACGCGGTGCCGATGAGGACGCGGTGCTGATGAGGACAGGGTGCTGATGAGGACGCGGTGCTGATGAGGACGCGGTGCTGATGCGGTGCTGATGAGGACGCGGTGCTGATGAGGACGCGGTGCTGATGAGGACAGGGTGCTGATGAGGACGCGGTGCCGATGAGGACGCGGTGCCGATGAGGACGCGGTGCCGATGAGGACGCGGTGCCGATGAGGACGCGGTGCTGATGACGCGGTGCCGATGAGGACGCGGTGCCGATGAGGACGCGGTGCCGATGAGGACGCGGTGCCGATGAGGACGCGGTGCTGATGCGGTGCTGATGAGGACGCGGTGCCGATGAGGACGCGGTGCCGATGAGGACGCGGTGCTGATGAGGACGCGGTGCTGATGACGCGGTGCCGATGAGGACGCGGTGCCGATGAGGACGCGGTGCCGATGAGGACGCGGTGCCGATGAGGACGCGGTGCCGATGAGGACGCGGTGCTGATGCGGTGCTGATGAGGACGCGGTGCTGATGAGGACGC e otoGar3.GL873575 10928459 3032 - 12073884 I e saiBol1.JH378287 1266672 108 - 2905041 I e aotNan1.NW_018494782v1 1473831 4874 - 1813869 M e cebCap1.NW_016107695v1 1223409 231 - 2164891 I e calJac3.chr4 169848831 102 + 171630274 I e dasNov3.JH569188 534991 278 + 760995 I e colAng1.NW_012114488v1 15582866 0 - 23502949 C e canFam3.chr1 56151506 409 + 122678785 I e chlSab2.chr13 96644292 4 + 98384682 I e cerAty1.NW_012002071v1 1365266 4 + 3144229 I e nomLeu3.chr3 156276023 0 + 157873769 C e manLeu1.NW_012106474v1 8188700 13 - 10857215 I e macNem1.NW_012011000v1 8335310 4 + 10161646 I e rheMac8.chr4 170302707 0 + 172585720 C e gorGor5.CYUI01015032v1 11447672 0 - 12463322 C e macFas5.chr4 169048432 0 - 170955103 C e panPan2.chr6 171760706 0 + 173848474 C e panTro5.chr6 173510164 0 + 175400573 C a score=61.000000 s hg38.chr6_KB021644v2_alt 75358 5 + 185823 GGTGC- s calJac3.chr4 169848933 6 + 171630274 GGTGCA i calJac3.chr4 I 102 C 0 e otoGar3.GL873575 10928459 3032 - 12073884 I e saiBol1.JH378287 1266672 108 - 2905041 I e aotNan1.NW_018494782v1 1473831 4874 - 1813869 M e cebCap1.NW_016107695v1 1223409 231 - 2164891 I e dasNov3.JH569188 534991 278 + 760995 I e colAng1.NW_012114488v1 15582866 0 - 23502949 C e canFam3.chr1 56151506 409 + 122678785 I e chlSab2.chr13 96644292 4 + 98384682 I e cerAty1.NW_012002071v1 1365266 4 + 3144229 I e nomLeu3.chr3 156276023 0 + 157873769 C e manLeu1.NW_012106474v1 8188700 13 - 10857215 I e macNem1.NW_012011000v1 8335310 4 + 10161646 I e rheMac8.chr4 170302707 0 + 172585720 C e gorGor5.CYUI01015032v1 11447672 0 - 12463322 C e macFas5.chr4 169048432 0 - 170955103 C e panPan2.chr6 171760706 0 + 173848474 C e panTro5.chr6 173510164 0 + 175400573 C a score=1353.000000 s hg38.chr6_KB021644v2_alt 75363 3 + 185823 TGA s nomLeu3.chr3 156276023 3 + 157873769 TGG i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169048432 3 - 170955103 TGG i macFas5.chr4 C 0 C 0 s calJac3.chr4 169848939 3 + 171630274 TGG i calJac3.chr4 C 0 C 0 e otoGar3.GL873575 10928459 3032 - 12073884 I e saiBol1.JH378287 1266672 108 - 2905041 I e aotNan1.NW_018494782v1 1473831 4874 - 1813869 M e cebCap1.NW_016107695v1 1223409 231 - 2164891 I e dasNov3.JH569188 534991 278 + 760995 I e colAng1.NW_012114488v1 15582866 0 - 23502949 C e canFam3.chr1 56151506 409 + 122678785 I e chlSab2.chr13 96644292 4 + 98384682 I e cerAty1.NW_012002071v1 1365266 4 + 3144229 I e manLeu1.NW_012106474v1 8188700 13 - 10857215 I e macNem1.NW_012011000v1 8335310 4 + 10161646 I e rheMac8.chr4 170302707 0 + 172585720 C e gorGor5.CYUI01015032v1 11447672 0 - 12463322 C e panPan2.chr6 171760706 0 + 173848474 C e panTro5.chr6 173510164 0 + 175400573 C a score=486.000000 s hg38.chr6_KB021644v2_alt 75366 1 + 185823 -T s panTro5.chr6 173510164 1 + 175400573 -T i panTro5.chr6 C 0 C 0 s panPan2.chr6 171760706 1 + 173848474 -T i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11447672 1 - 12463322 -T i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156276026 1 + 157873769 -T i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170302707 1 + 172585720 -T i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169048435 1 - 170955103 -T i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8335314 1 + 10161646 -T i macNem1.NW_012011000v1 I 4 C 0 s cerAty1.NW_012002071v1 1365270 1 + 3144229 -T i cerAty1.NW_012002071v1 I 4 C 0 s chlSab2.chr13 96644296 1 + 98384682 -T i chlSab2.chr13 I 4 C 0 s manLeu1.NW_012106474v1 8188713 1 - 10857215 -T i manLeu1.NW_012106474v1 I 13 C 0 s colAng1.NW_012114488v1 15582866 1 - 23502949 -T i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169848942 1 + 171630274 A- i calJac3.chr4 C 0 C 0 e otoGar3.GL873575 10928459 3032 - 12073884 I e saiBol1.JH378287 1266672 108 - 2905041 I e aotNan1.NW_018494782v1 1473831 4874 - 1813869 M e cebCap1.NW_016107695v1 1223409 231 - 2164891 I e dasNov3.JH569188 534991 278 + 760995 I e canFam3.chr1 56151506 409 + 122678785 I a score=185207.000000 s hg38.chr6_KB021644v2_alt 75367 31 + 185823 GAGGACGCGGTGCTGATGAGGACGGCGAAGG s panTro5.chr6 173510165 31 + 175400573 GAGGACGCGGTGCTGATGAGGACGGCGAAGG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171760707 31 + 173848474 GAGGACGCGGTGCTGATGAGGACGGCGAAGG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11447673 31 - 12463322 GAGGGCGCGGTGCTGATGAGGATGGCGAAGG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156276027 31 + 157873769 GAGGACGTGGTGCTGATGAGGACAGCGAAGG i nomLeu3.chr3 C 0 I 1 s rheMac8.chr4 170302708 31 + 172585720 GAGGACACGGTGCTGATGAGGACGGAGAAGG i rheMac8.chr4 C 0 I 1 s macFas5.chr4 169048436 31 - 170955103 GAGGACACGGTGCTGATGAGGACGGAGAAGG i macFas5.chr4 C 0 I 1 s macNem1.NW_012011000v1 8335315 31 + 10161646 GAGGACATGGTGCTGATGAGGACGGAGAAGG i macNem1.NW_012011000v1 C 0 I 1 s cerAty1.NW_012002071v1 1365271 31 + 3144229 GAGGACATGGTGCTGGTGAGGACGGTGAAGG i cerAty1.NW_012002071v1 C 0 I 1 s chlSab2.chr13 96644297 31 + 98384682 GAGGACATGGTGCTGATGAGGACAGAGGAGG i chlSab2.chr13 C 0 I 1 s manLeu1.NW_012106474v1 8188714 31 - 10857215 GAGGACACGGTGCTGATGAGGACAGAGAAGG i manLeu1.NW_012106474v1 C 0 I 1 s colAng1.NW_012114488v1 15582867 31 - 23502949 GAGGACGCGGTGCTGATGAGGACCGAGGAGG i colAng1.NW_012114488v1 C 0 I 1 s calJac3.chr4 169848943 25 + 171630274 GAGGATGCAGCGCTGATGACCACGT------ i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1266780 25 - 2905041 GAGGACGCAGTGCTGATGGCCGCGC------ i saiBol1.JH378287 I 108 C 0 e otoGar3.GL873575 10928459 3032 - 12073884 I e aotNan1.NW_018494782v1 1473831 4874 - 1813869 M e cebCap1.NW_016107695v1 1223409 231 - 2164891 I e dasNov3.JH569188 534991 278 + 760995 I e canFam3.chr1 56151506 409 + 122678785 I a score=1241376.000000 s hg38.chr6_KB021644v2_alt 75398 177 + 185823 TCAGGAAGTGCTAGTTCCGAGCGAGGAGGGAACAGGAGGTGAGCGGGCTGGGCTTTAGGGTGAGGCGAGGCTCATGAAGACTAAAGAGCCAGGGAGGCGCAGGAACCAGGGAGTCGAGGATCCAGGGCTCTGCCGAGGGGGCCTCAGC-GGGGAGGCGTGAAGCCGAACAGAACGACA s panTro5.chr6 173510196 176 + 175400573 TCAGGAAGTGCTAGTTCCGAGCGAGGAGGGAAGAGGAGGTGAGCGAGCTGGGCTTTAGGGTGAGGCGAGGCTCATGAAGACTAAAGAGCCAGG-AGGCGCAGGAACCAGGGAGTCGAGGATCCAGGGCTCCGCCAAGGGGGCCTCAGC-GGGGAGGCGTGAAGCCGAACAGAATGACA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171760738 176 + 173848474 TCAGGAAGTGCTAGTTCCGAGCGAGGAGGGAAGAGGAGGTGAGCGAGCTGGGCTTTAGGGTGAGGCGAGGCTCATGAAGACTAAAGAGCCAGG-AGGCGCAGGAACCAGGGAGTCGAGGATCCAGGGCTCCGCCAAGGGGGCCTCAGC-GGGGAGGCGTGAAGCCGAACAGAATGACA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11447704 177 - 12463322 TCAGGAAGTGCTAGTTCCGAGCGAGGAGGGAAGAGGAGGTGAGCGGGCTGGGCTTTAGGGTGAGGCGAGGCTCAGGAAGACTAAAGAGCCAGGGAGGCGCAGGAACCAGGGAGTCGAGGATCCAGGGCTCCGCCAAGGGGGCCTCAGC-GGGGAGGCGTGAAGCCGAACAGAACGACA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156276059 176 + 157873769 TCAGGAAGTGCTAGTTCCGAGGGAAGAGGGAAGAGGAGGTGAGCGGGCTGGGCTTTAGGGTGAGGCGAGGCTCATGAAGACTAAAGAGCCAGG-AGGTGCAGGAAACTGGGAGTGGAGGATCCAGGGCTCCGCCAAGGGGGCCTCAGC-GAGGAGGCATGAAGCCGAACAGAACGACA i nomLeu3.chr3 I 1 C 0 s rheMac8.chr4 170302740 167 + 172585720 TCAGGAAGTGCTAGTTCCATGGGAGGAGGGAAGAGGAGGTGACC--------CTGAAGGGTGAGGCGAGGCTTGTGAAGACTAAAGAGCCAGG-AGGCGCAGGCACCTGGGTGTGGAGGATCCAGGGCTCCGCCAA-GGGG-CTCAGCGGGGGAGGCATAAAGCCATCCAGAATGACA i rheMac8.chr4 I 1 C 0 s macFas5.chr4 169048468 168 - 170955103 TCAGGAAGTGCTAGTTCCATGGGAGGAGGGAAGAGGAGGTGACC--------CTGAAGGGTGAGGCGAGGCTTGTGAAGACTAAAGAGCCAGG-AGGCGCAGGCACCTGGGTGTGGAGGATCCAGGGCTCCGCCAAGGGGG-CTCAGCGGGGGAGGCATAAAGCCATCCAGAATGACA i macFas5.chr4 I 1 C 0 s macNem1.NW_012011000v1 8335347 168 + 10161646 TCAGGAAGTGCTAGTTCCATGGGAGGAGGGAAGAGGAGGTGACC--------CTGAAGGGTGAGGCGAGGCTTGTGAAGACTAAAGAGCCAGG-AGGCGCAGGCACCTGGGTGTGGAGGATCCAGGGCTCCGCCAAGGGGG-CTCAGCGGGGGAGGCATAAAGCCATCCAGAATGACA i macNem1.NW_012011000v1 I 1 C 0 s cerAty1.NW_012002071v1 1365303 176 + 3144229 TCAGGAAGTGCTAGTTCCGTGGGAGGAGGGAAGAGGAGGTGACCGGGCTGGGCTTCAGGGTGAGGCGAGGCTTGTGAAGACTAAAGAGCCAGG-AGGCACAGGAACCTGGGTGTGGAGGATCCAGGGCTCCGCCAAGGGGG-CTCAGCGGGGGATGCATAAAGCCATCCAGAATGACA i cerAty1.NW_012002071v1 I 1 C 0 s chlSab2.chr13 96644329 177 + 98384682 TCAGGAAGTGCTAGTTCCGTGGGAGGAGGGAAGAGGAGGTGACCGGGTTGGGCTTCAGGGTGAGGCAAGGCTCGTGAAGACTAAAGAGCCAGG-AGGCGCAGGAACCTGGGTGTGGAGGATCCAGGGCTCCACCAAGGGTGCCTCAGCGGGGGAGGCATAAAGCCATCCAGAATGACA i chlSab2.chr13 I 1 C 0 s manLeu1.NW_012106474v1 8188746 176 - 10857215 TCAGGAAGTGCTAGTTCCATGGGAGGAGGGAAGAGGAGGTGACCAGGCTGGGCTTCAGGGTGAGGCGAGGCTTGTGAAGACTAAAGAGCCAGG-AGGCGCAGGCACCTGGGTGTGGAGGATCCAGGGCTCCGCCAAGGGGG-CTCAGCGGGGGAGGCATAAAGCCATCCAGAATGACA i manLeu1.NW_012106474v1 I 1 C 0 s colAng1.NW_012114488v1 15582899 176 - 23502949 TCAGGAAGTGCTAGTTCCGTGGGAGGAGGGAAGAGGAGGTGACTAGGCTGGGCTTCAGGGTGAAGCGAAGCTCATGAAGACTAAAGAGCCAGG-AGGTGCAGGAACCTGGGTGTGGAGGATCCAGGGCTCCGCCAAGGGGG-CTCAGCGGGGGAGGCACAAAGCCATCCAGAATGACA i colAng1.NW_012114488v1 I 1 C 0 s calJac3.chr4 169848968 172 + 171630274 GCAGGAAGTGCGGGGTTCAAGGGAGGAGGGAGGAGGAGAT-AGCGGAATGGGCTTGAGGATGAGGCAAGGCTTGTGAAGAATGAAGAGCCTGA-AGGTGCA-GAACAGGGGCGTGGAGGACCCAGGGCTCCACCGAGGGGC-CTCAGC--GGGAGGCATGGAGCCTTCCAGCATGGCA i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1266805 171 - 2905041 TCAGGAAGTGCTGGGTCCAAGGGAGGAGTG-GGAGGGGGA-AGCGGGATGGGCTTCCCGGTGAGGCGAGCCCTGTGAGGAGTGAAGGTCCCGG-AGGCACAGGGACGTGGGCGTGGAGGACCCAGGGCTCCGCCGAGGGGC-CTCAGC--GGGAGGCACGGAGCCTTCTAGCACGTC- i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1223640 173 - 2164891 TCAGGAAGTGCTAGGTCCAAGGGAGGAGGGAGGAGGAGGT-AGTGGAATGGGCTTCAGGGTGAGGCGAGCCTTGTGAAGAATGAAGATCCTGA-AGGCACAGGAACGTGGGTGTGGAGGACCCAGGGCTCCACTGAGGGGC-CTCAGC--GGGAGGCATGGAGCCTTCTAGCACGGCA i cebCap1.NW_016107695v1 I 231 C 0 e otoGar3.GL873575 10928459 3032 - 12073884 I e aotNan1.NW_018494782v1 1473831 4874 - 1813869 M e dasNov3.JH569188 534991 278 + 760995 I e canFam3.chr1 56151506 409 + 122678785 I a score=1275260.000000 s hg38.chr6_KB021644v2_alt 75575 180 + 185823 GGCAGAGGTGGAGGCTGATGCTGACTGTGTGCTGAA-GCCGGCCCTGTGA-AGTAGGCAG--CCCCATCACTTGGTTCACGGACACGCAGTTCTCAAGGGCGTGCAACCTGCCAGGCGCTGCAGAGCGTCCGGGATGAAAAC------ACTAACATGGATCACTCGCAGGTCCCCCTGGAG--TCAGGAGGG- s panTro5.chr6 173510372 180 + 175400573 GGCAGAGGTGGAGGCTGATGCTGACTGTGTGCTGAA-GCCGGCCCTGTGA-AGTAGGCAG--CCCCATCACTTGGTTCACGGACACGCAGTTCTCAAGGGCGTGCAACCTGCCAGGCGCTGCAGAGCGTCCGGGATGAAAAT------ACTAACGTGGATCACTCGCAGGTCCCCCTGGAG--TCAGGAGGG- i panTro5.chr6 C 0 C 0 s panPan2.chr6 171760914 180 + 173848474 GGCAGAGGTAGAGGCTGATGCTGACTGTGTGCTGAA-GCCGGCCCTGTGA-AGTAGGCAG--CCCCATCACTTGGTTGACGGACACGCAGTTCTCAAGGGCGTGCAACCTGCCAGGCGCTGCAGAGCGTCCGGGATGAAAAT------ACTAACGTGGATCACTCGCAGGTCCCCCTGGAG--TCAGGAGGG- i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11447881 180 - 12463322 GGCAGAGGGGGAGGCTGATGCTGACTGTGTGCTGAA-GCCGGCCCTGTGA-AGTAGGGAG--CCCCATCACTTGGTTCACGGACACGCAGTTCTCAAGGGCGCGCAACCTGCCGGGCGCTGCAGAGCGTCCGGGATGAAAAC------ACTAACATGGATCACTCGCAGGTCCCCCTGGAG--TCAGGAGGG- i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156276235 180 + 157873769 GGCAGAAGTGGGAGCTGGTGCTGACTGTCTGCTGAA-GCCGGCCCTGTGA-AGTAGGCAG--CCCCATCACTCGGTTCATGGACAAGCAGTTCTCAAGGGCGTGCAACCTGCCAGGCGCTGCAGAGCCTCCGGGATGAAAAC------ACTAACATGGATCACTCTCAGGTCCCCCTGGAG--TCAGGAGAG- i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170302907 177 + 172585720 GGCAGAGGTGGCAGGTGATGCTGATAGTGTGCTAAA-GCCAGCCCTGTGA-AGTAGGCAA-CCCCCAGCACTTGGTTCAGGAACATGCAGTTCTCAAGGGTGTGCAAACTGCCAGGTGCTGCAGAGCATCTGGAATGAAAAC----------ACAGGGATCACACGCGGGTCCCCCTGGAG--TCAGGAGGG- i rheMac8.chr4 C 0 I 1 s macFas5.chr4 169048636 177 - 170955103 GGCAGAGGTGGCAGGTGATGCTGATAGTGTGCTAAA-GCCAGCCCTGTGA-AGTAGGCAA-CCCCCAGCACTTGGTTCAGGAACATGCAGTTCTCAAGGGTGTGCAAACTGCCAGGTGCTGCAGAGCATCTGGGATGAAAAC----------ACAGGGATCACACGCGGGTCCCCCTGGAG--TCAGGAGGG- i macFas5.chr4 C 0 I 1 s macNem1.NW_012011000v1 8335515 177 + 10161646 GGCAGAGGTGGCAGGTGATGCTGATAGTGTGCTAAA-GCCAGCCCTGTGA-AGTAGGCAA-CCCCCAGCACTTGGTTCAGGAACATGCAGTTCTCAAGGGTGTGCAAACTGCCAGGTGCTGCAGAGCATCTGGGATGAAAAC----------ACAGGGATCACACGCGGGTCCCCCTGGAG--TCAGGAGGG- i macNem1.NW_012011000v1 C 0 I 1 s cerAty1.NW_012002071v1 1365479 177 + 3144229 GGCAGAGGTGGCAGGTGATGCTGATAGTGTGCTAAA-GCCAGCCCTGTGA-AGTAGGCAA-CCCCCAGCACTTGGTTCAGGAACATGCAGTTCTCAAGGGTGTGCAACCTGCCAGGTGCTGCAGAGCATCTGGGATGAAAGC----------ACAGGGATCACACGCGGGTCCCCCTGGAG--TCAGGAGGG- i cerAty1.NW_012002071v1 C 0 I 1 s chlSab2.chr13 96644506 177 + 98384682 GGCAGAGGTGGCAGGTGATGCTGATTGCGTGCTAAA-GCCAGCCCTGTGA-AGTAGGCAA-CCCCCAGCACTTGGTTCAGGAACATGCAGTTCTCGAGGGTGTGCAACCTGCCAGGTGCTGCAGAGCATCTGGGATGAAAAC----------ACAGGGACCACACGCGGGTCCCCATGGAG--TCAGGAGGG- i chlSab2.chr13 C 0 I 1 s manLeu1.NW_012106474v1 8188922 177 - 10857215 GGCAGAGGTGGCAGGTGATGCTGATAGTGTGCTAAA-GCCAGCCCTGTGA-AGTAGGCAA-CCCCCAGCACTTGGTTCAGGAACATGCAGTTCTCAAGGGTGTGCAAACTGCCAGGTGCTGCAGAGCATCTGGGATGAAAAC----------ACAGGGATCACATGTGGGTCCCCCTGGAG--TCAGGAGTG- i manLeu1.NW_012106474v1 C 0 I 1 s colAng1.NW_012114488v1 15583075 178 - 23502949 GGCAGAGGTGGCAGGTGATGCTGACTGTGTGCTAAA-GCCAGCCCTGTGA-AGGAGGCAACCCCCCAGCACTTGGTTCAGGAACATGCAGTTCTCAAGGGTATGCAACCTGCCAGGTGCTGCAGAGCATCTGGGATGAAAAC----------ACAGGGATCACACGCAGGTCCCCCTGGAG--TCAGGAGGG- i colAng1.NW_012114488v1 C 0 I 1 s calJac3.chr4 169849140 177 + 171630274 GGCAGTGGTGGGGGCTGAGGCTGGCTGTGTGCCAGA-GCT-GCCCTGTTG-AGCAGGCAG--CCCCATCACCTGGTTCAAGGACACGCAGTTCTCAAGGGCATGCAGCCGGCCAGGCACCACAGAGCAT-GGGGATGAAA-T------GCTGACGCGGAGCCCGCATGGGTCCTCCTGGGG--TCAGGAGGG- i calJac3.chr4 C 0 I 1 s saiBol1.JH378287 1266976 158 - 2905041 GGCAGCGGCCGGAGC----------------CCAGA-GCC-GCCCTGTTG-AGCAGCCAG--CCCCGGCACCTGGTTCAAGGACGCGCAGTCCTCGAGGGCGTGCGGCCGGCCAGGCGCCAGTG---TC-AGGGGTGAAA-C------ACTGAGGTGGGGCCCCTGCGGGTCCTCCTGGGG--TCAGGAGGG- i saiBol1.JH378287 C 0 I 1 s cebCap1.NW_016107695v1 1223813 178 - 2164891 GGCAGCGGTGGGAGCTGAGGCTGGCTGTGTGCTAGA-GCC-ACCCTGTTG-AGCAGGCAG--CCCCATCACCTGGTTCAAGGACACGCAGTTCTCAAGGGTGTGCAGCCGGCCAGGCGCCACAGAGCACAGGGGGTGAAA-C------ACTGACGTGGAGCCCATGTGGGTCCTCCTGGGG--TCAGGAGGG- i cebCap1.NW_016107695v1 C 0 I 39 s canFam3.chr1 56151915 166 + 122678785 GGCGGTGG-GGAAACTCATTCCTGTTGTTTGCAGAAGGCTGGCCGTGTGGCCGTGTGCAG--TGTCACCGTTTGGTC-------------------GGTGTGTACAACTTGCCAGGTGCCAGAGAGCATCTGGGAAGAAAACAGGGGAAATTATGTGAAG-----GCAGGTCCTCTTGAGGGTCCAGGTGGGG i canFam3.chr1 I 409 C 0 e otoGar3.GL873575 10928459 3032 - 12073884 I e aotNan1.NW_018494782v1 1473831 4874 - 1813869 M e dasNov3.JH569188 534991 278 + 760995 I a score=233885.000000 s hg38.chr6_KB021644v2_alt 75755 41 + 185823 ATAACCCGGAAAGAGGCCCCTGTGGTGTGTGCCGCAGCCCA----- s panTro5.chr6 173510552 41 + 175400573 ATGGCCTGGAAAGAGGCCCCTGTAGTGTGTGCCGCAGCCCA----- i panTro5.chr6 C 0 C 0 s panPan2.chr6 171761094 41 + 173848474 ATGGCCTGGAAAGAGGCCCCTGTAGTGTGTGCCGCAGCCCA----- i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11448061 41 - 12463322 ATAACCCGGAAAGAGGCCCCTGTGTTGTGTGCCGCAGCCCA----- i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156276415 41 + 157873769 ATGACCTGGAAAGAGGACCCTGGAGTGTGTGCTGCAGCCTA----- i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170303085 40 + 172585720 ACGACCTGGAAAGAGGCCCCTGGAGTGTG-GCCGCAGTCCA----- i rheMac8.chr4 I 1 C 0 s macFas5.chr4 169048814 40 - 170955103 ATGACCTGGAAAGAGGCCCCTGGAGTGTG-GCCGCAGTCCA----- i macFas5.chr4 I 1 C 0 s macNem1.NW_012011000v1 8335693 40 + 10161646 ACGACCCGGAAAGAGGCCCCTGGAGTGTG-GCCGCAGTCCA----- i macNem1.NW_012011000v1 I 1 C 0 s cerAty1.NW_012002071v1 1365657 40 + 3144229 ACGACCTGGAAAGAGGCCCCTGGAGTGTG-GCCGCAGCCCA----- i cerAty1.NW_012002071v1 I 1 C 0 s chlSab2.chr13 96644684 40 + 98384682 ATGACCTGGAAAGAGGCCCCTGGAGTGTG-GCGGCAGCCCA----- i chlSab2.chr13 I 1 C 0 s manLeu1.NW_012106474v1 8189100 40 - 10857215 ACGACCTGGAAAGAGGCCCCTGGAGTGTG-GCCGCAGCCCA----- i manLeu1.NW_012106474v1 I 1 C 0 s colAng1.NW_012114488v1 15583254 40 - 23502949 ACAACCTGGAAAGAGGCCCCTGGAGTGTG-GCCGCAGCCCA----- i colAng1.NW_012114488v1 I 1 C 0 s calJac3.chr4 169849318 38 + 171630274 ACGGCCTGAGAAGCAG-CGCTGGAGTGTGTGCTGCAGCT------- i calJac3.chr4 I 1 C 0 s saiBol1.JH378287 1267135 38 - 2905041 ACGGCCTGAAAAGCGG-CTCTGGAGTGTGTGCTGCGGCC------- i saiBol1.JH378287 I 1 C 0 s canFam3.chr1 56152081 33 + 122678785 ACAGACTGTAAGGAGGA-------------GCCGCAGCACCTGCCA i canFam3.chr1 C 0 C 0 e otoGar3.GL873575 10928459 3032 - 12073884 I e aotNan1.NW_018494782v1 1473831 4874 - 1813869 M e cebCap1.NW_016107695v1 1223991 39 - 2164891 I e dasNov3.JH569188 534991 278 + 760995 I a score=1030583.000000 s hg38.chr6_KB021644v2_alt 75796 133 + 185823 CAGGGCAGTTCAGTGCCCAGCAGCACCAGGTGGCAGGAGGTGCCTAGGGCAGGCGCC---CCTGTGCAGGACGCTGGGGGACACAAGGGGTTTGGCTGCA----------------------------------------------------------------------------AGACAggagggagggatgggatggggaca-ggagaga s panTro5.chr6 173510593 133 + 175400573 CAGGGCAGTTCAGTGCCCAGCAGCACCAGGTGGCAGGAGGTGCCTAGGGCAGATGCC---CCTGTGCAGGACGCTGGGGGACACAAGGGGTTTGGCTGCG----------------------------------------------------------------------------AGACAggagggagggatgggatggggata-ggagaga i panTro5.chr6 C 0 C 0 s panPan2.chr6 171761135 133 + 173848474 CAGGGCAGTTCAGTGCCCAGCAGCACCAGGTGGCAGGAGGTGCCTAGGGCAGATGCC---CCTGTGCAGGACGCTGGGAGACACAAGGGGTTTGGCTGCG----------------------------------------------------------------------------AGACAGGAGGGAGGGATGGGATGGGGATA-GGAGAGA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11448102 133 - 12463322 CAGGGCAGTTCAGTGCCCAGCAGCACCAGGTGGCAGGAGGTACCTAGGGAAGGCGCC---CTTGTGCAGGACGCTGGGGGACACAAGGGGTTTGGCTGCG----------------------------------------------------------------------------AGACAGGAGGGAGGGATGGGATGGGGATA-GGAGAGA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156276456 209 + 157873769 CGGGGCAGTTCAGTGCCCAGCAGCACCAGGTGGCAGGAGGTGCCTAGGGCAGGCGCC---CCTGTGCACGACGCTGGGGGACATGAGGGGCTTGGCTGTGAGACAGGAGGGAGGGATGGGATGGGAAGGATAGGATGGGGACAGGAGGGAGGGATGGAGGCAGAAGGGAAGGATGAAGACAGGAGGGAGGGATGGGATGGGGACA-GGAGAAA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170303125 132 + 172585720 CAGGGCAGTTCAGTGCCCAGCAGCACCAGGTGGCAGGTGGTGCCTAGGGCAGGCACG---CCTGTGCAGGACGCTGGGGG-CACTAGGGGTTTGGCTGGG----------------------------------------------------------------------------AGACAGGAGGGAGGCATGGGCTGGGGACA-GGAGAGA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169048854 132 - 170955103 CAGGGCAGTTCAGTGCCCAGCAGCACCAGGTGGCAGGTGGTGCCTAGGGCAGGCACC---CCTGTGCAGGACGCTGGGGG-CACTAGGGGTTTGGCTGGG----------------------------------------------------------------------------AGACAGGAGGGAGGCATGGGCTGGGGACA-GGAGAGA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8335733 132 + 10161646 CAGGGCAGCTCAGTGCCCAGCAGCACCAGGTGGCAGGTGGTGCCTAGAGCAGGCACC---CCTGTGCAGGACGCTGGGGG-CACTAGGGGTTTGGCTGGG----------------------------------------------------------------------------AGACAGGAGGGAGGCATGGGCTGGGGACA-GGAGAGA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1365697 133 + 3144229 CAGGGCAGTTCAGTGCCCAGCAGCACCAGGTGGCAGGAGGTGCCTAGGGTAGGCGCC---CCTGTGCAGGACGCTGGGGGACACTAGGGGTTTGGCTGGG----------------------------------------------------------------------------TGACAGGAGGGAGGCATGGGCTGGGGACA-GGAGAGA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96644724 133 + 98384682 CAGGGCAGTTCAGTGCCCAGCAGCACGAGGTGGCAGGAGGTGCCTAGGGTAGGCGCC---CCTGTGCAGGACGCTGGGGGACACTAGGGGTTTGGCTGGG----------------------------------------------------------------------------AGAGAGGAGGGAGGGATGGGATAGGGACA-GGAGAGA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8189140 133 - 10857215 CAGGGCAGTTCAGTGCCCAGCAGCACCAGGTGGCAGGCGGTGCCTAGGGCAGGCACC---CCTGTGCAGGATGCTGGGGGACACTAGGGGTTTGGCTGGG----------------------------------------------------------------------------AGACAGGAGGGAGGCATGGGCTGGGGACA-GGAGAGA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15583294 133 - 23502949 CAGGGCAGTTCAGTGCCCAGCAGCACCAGGTGGCAGGAGGTGCCTAGGGCAGGTGCC---CCTGTGCAGGATGCTGGGGGACACTAGGGGTTTGGCTGGG----------------------------------------------------------------------------AGACAGGAGGGAGGGATGGGATGGGGACA-GGAGAGA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169849356 129 + 171630274 CAGGTCAATTCAGTGCCCAGCAGCACT-GGTAGCAGGAGGTGCTGAG-GTGGGCAC----CCTGTGTGGGATGCCGG-GG-CAGGAGGGGTTTGGCAGTG----------------------------------------------------------------------------AGACAggaggaagggatgggattgggacagggggaga i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1267173 130 - 2905041 CAGGGCAGTTCAGTGCCCAGCAGCACCGGGTGGCAGGAGGTGCCTAG-GTGGGCAC----CCTGTGCAGGACGCTGGCGG-CAggaggggtttggctggg----------------------------------------------------------------------------agacaggaggaagggatgggattggggca-ggggaga i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1224030 130 - 2164891 CAGGGCAGTTCAGTGCCCAGCAGCACCAGGTGGTAGGAGGTGCCCAG-GTGGGCAC----CCTGTGCAGGACGCTGGGGG-CAGGAGGGGTTTGGCTGTG----------------------------------------------------------------------------AGGCAGGAGGAAGGGATAGGATTGGGACG-GGGGAGA i cebCap1.NW_016107695v1 I 39 I 66 s canFam3.chr1 56152114 116 + 122678785 AAGGGCAG---AATG-ACAGGTGCAGATGGTTGCAGGAAGGCCCCACAGTAACCACCATACCTGTGCAG--TGTCTGGGAAGGTGAGCGATTT----GCA----------------------------------------------------------------------------AGACCT--AGTAGAGCTGGGATGGGGAC--------- i canFam3.chr1 C 0 C 0 e otoGar3.GL873575 10928459 3032 - 12073884 I e aotNan1.NW_018494782v1 1473831 4874 - 1813869 M e dasNov3.JH569188 534991 278 + 760995 I a score=55305.000000 s hg38.chr6_KB021644v2_alt 75929 9 + 185823 ggcacgggg s panTro5.chr6 173510726 9 + 175400573 ggcacgggg i panTro5.chr6 C 0 C 0 s panPan2.chr6 171761268 9 + 173848474 GGCACGGGG i panPan2.chr6 C 0 M 4527 s gorGor5.CYUI01015032v1 11448235 9 - 12463322 GGCACGGGG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156276665 9 + 157873769 AGCATGGGG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170303257 9 + 172585720 GGCATGGGG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169048986 9 - 170955103 GGCATGGGG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8335865 9 + 10161646 GGCATGGGG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1365830 9 + 3144229 GGCATGGGG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96644857 9 + 98384682 GGCATGGGG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8189273 9 - 10857215 GGCATGGGG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15583427 9 - 23502949 GGCATGGGG i colAng1.NW_012114488v1 C 0 C 0 s canFam3.chr1 56152230 7 + 122678785 --CTCGAGG i canFam3.chr1 C 0 C 0 e otoGar3.GL873575 10928459 3032 - 12073884 I e saiBol1.JH378287 1267303 0 - 2905041 C e aotNan1.NW_018494782v1 1473831 4874 - 1813869 M e cebCap1.NW_016107695v1 1224160 66 - 2164891 I e calJac3.chr4 169849485 0 + 171630274 C e dasNov3.JH569188 534991 278 + 760995 I a score=48411.000000 s hg38.chr6_KB021644v2_alt 75938 10 + 185823 acaggaggga-- s panTro5.chr6 173510735 10 + 175400573 acaggaggga-- i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11448244 10 - 12463322 ACAGGAGGGA-- i gorGor5.CYUI01015032v1 C 0 I 101 s nomLeu3.chr3 156276674 10 + 157873769 ACAGGAGGGA-- i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170303266 10 + 172585720 ACAGGAGGGA-- i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169048995 10 - 170955103 ACAGGAGGGA-- i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8335874 10 + 10161646 ACAGGAGGGA-- i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1365839 10 + 3144229 ACCGGAGGGA-- i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96644866 10 + 98384682 ACAGGAGGGA-- i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8189282 10 - 10857215 ACAGGAGGGA-- i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15583436 10 - 23502949 ACAGGAGGGA-- i colAng1.NW_012114488v1 C 0 C 0 s canFam3.chr1 56152237 10 + 122678785 --AGGTAGGGGA i canFam3.chr1 C 0 C 0 e otoGar3.GL873575 10928459 3032 - 12073884 I e saiBol1.JH378287 1267303 0 - 2905041 C e aotNan1.NW_018494782v1 1473831 4874 - 1813869 M e cebCap1.NW_016107695v1 1224160 66 - 2164891 I e calJac3.chr4 169849485 0 + 171630274 C e dasNov3.JH569188 534991 278 + 760995 I e panPan2.chr6 171761277 4527 + 173848474 M a score=52776.000000 s hg38.chr6_KB021644v2_alt 75948 12 + 185823 tgcgatgaggga s panTro5.chr6 173510745 12 + 175400573 tgtgatgaggga i panTro5.chr6 C 0 C 0 s nomLeu3.chr3 156276684 12 + 157873769 TGGGATGAGGGA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170303276 12 + 172585720 TTGGATGAGGGA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169049005 12 - 170955103 TTGGATGAGGGA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8335884 12 + 10161646 TTGGATGAGGGA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1365849 12 + 3144229 TTGGATGAGGGA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96644876 12 + 98384682 CTGGATGAGGGA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8189292 12 - 10857215 TTCGATGAGGGA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15583446 12 - 23502949 TTGGATGAGGGA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169849485 9 + 171630274 ---aatggagga i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1267303 9 - 2905041 ---aacggggga i saiBol1.JH378287 C 0 C 0 s canFam3.chr1 56152247 12 + 122678785 GTCCCTGAGGGA i canFam3.chr1 C 0 I 104 e otoGar3.GL873575 10928459 3032 - 12073884 I e aotNan1.NW_018494782v1 1473831 4874 - 1813869 M e cebCap1.NW_016107695v1 1224160 66 - 2164891 I e dasNov3.JH569188 534991 278 + 760995 I e gorGor5.CYUI01015032v1 11448254 101 - 12463322 I e panPan2.chr6 171761277 4527 + 173848474 M a score=41108.000000 s hg38.chr6_KB021644v2_alt 75960 11 + 185823 ccagagggatg s panTro5.chr6 173510757 11 + 175400573 ccagagggatg i panTro5.chr6 C 0 C 0 s nomLeu3.chr3 156276696 11 + 157873769 CCAGAGGGATG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170303288 11 + 172585720 TGGGAGGGATG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169049017 11 - 170955103 TGGGAGGGATG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8335896 11 + 10161646 TGGGAGGGATG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1365861 11 + 3144229 TGGGAGGGATG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96644888 11 + 98384682 CGGGAGGGATG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8189304 11 - 10857215 TGGGAAGGATG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15583458 11 - 23502949 TGGGAGGGATG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169849494 11 + 171630274 gaagagggact i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1267312 11 - 2905041 gaagcgggagg i saiBol1.JH378287 C 0 C 0 e otoGar3.GL873575 10928459 3032 - 12073884 I e aotNan1.NW_018494782v1 1473831 4874 - 1813869 M e cebCap1.NW_016107695v1 1224160 66 - 2164891 I e dasNov3.JH569188 534991 278 + 760995 I e canFam3.chr1 56152259 104 + 122678785 I e gorGor5.CYUI01015032v1 11448254 101 - 12463322 I e panPan2.chr6 171761277 4527 + 173848474 M a score=339910.000000 s hg38.chr6_KB021644v2_alt 75971 69 + 185823 aaatgggat-------------------tggggacgggagggagggatggggacagaagggagggaaatggg------atgggagggatgggat s panTro5.chr6 173510768 69 + 175400573 aaatggggt-------------------tggggatgggagggagggatggggacagaagggagagaaatggg------atgggagggatgggat i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11448355 82 - 12463322 AAATGGGATGGGAG------GGATGGGATGGGGACAGGAGGGAGGGATGGGGACAGAAGGGAGGGAAATGGG------ATGGGAGGGATGGGAT i gorGor5.CYUI01015032v1 I 101 C 0 s nomLeu3.chr3 156276707 88 + 157873769 AAATGGGACTGGGGACAGGCAGGAGGGATGGGGACAGGAGGGAGAGATGGGGACAGAAGGGAGGGAAATGGG------ATGGGAGGGATGGGAT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170303299 69 + 172585720 AAATGGGAC-------------------TGGGGACAGCAGGGAGGGATGGGGACAGGAGAGAGGGGAATGGG------ATGGGAGTGATGGGAC i rheMac8.chr4 C 0 I 1 s macFas5.chr4 169049028 69 - 170955103 AAATGGGAC-------------------TGGGGACAGGAGGGAGGGATGGGGACAGGAGAGAGGGGAATGGG------ATGGGAGTGATGGGAT i macFas5.chr4 C 0 I 306 s macNem1.NW_012011000v1 8335907 69 + 10161646 AAATGGGAC-------------------TGGGGACAGGAGGGAGGGATGGGGACAGGAGAGAGGGGAATGGG------ATGGGAGTGATGGGAT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1365872 69 + 3144229 AAATGGGAC-------------------TGGGGACAGGAGGGAGGGATGGGGACAGGAGAGAGGGGAATGGG------ATGGGAGTGATGGGAT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96644899 69 + 98384682 AAATGGGAC-------------------TGGGGACAGGAGGGAGGGATGGGGACAGGAGAGAGGGGAATGGG------ATGGGAGTGATGGGAT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8189315 69 - 10857215 AAATGGGAC-------------------TGGGGACAGGAGGGAGGGATGGGGACAGGAGAGAGGGGAATGGG------ATGGGAGTGATGGGAT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15583469 69 - 23502949 AAATGGGAC-------------------TGGGGACAGGAGGGAGGGATGGGGACAGGAGAGAGGGGAATGGG------ATGGGAGAGATGGGAT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169849505 63 + 171630274 --------------------------gatggggacaggaggaagggatggggacaggag---gagaaatgggagagaagagggagggatggg-- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1267323 37 - 2905041 --------------------------gatggggacaggaggaggggatg-----------------------------gaatgagggatggg-- i saiBol1.JH378287 C 0 C 0 e otoGar3.GL873575 10928459 3032 - 12073884 I e aotNan1.NW_018494782v1 1473831 4874 - 1813869 M e cebCap1.NW_016107695v1 1224160 66 - 2164891 I e dasNov3.JH569188 534991 278 + 760995 I e canFam3.chr1 56152259 104 + 122678785 I e panPan2.chr6 171761277 4527 + 173848474 M a score=11000.000000 s hg38.chr6_KB021644v2_alt 76040 2 + 185823 gg s panTro5.chr6 173510837 2 + 175400573 gg i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11448437 2 - 12463322 GG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156276795 2 + 157873769 GG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170303369 2 + 172585720 GG i rheMac8.chr4 I 1 C 0 s macFas5.chr4 169049403 2 - 170955103 GG i macFas5.chr4 I 306 C 0 s macNem1.NW_012011000v1 8335976 2 + 10161646 GG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1365941 2 + 3144229 GG i cerAty1.NW_012002071v1 C 0 I 199 s chlSab2.chr13 96644968 2 + 98384682 GG i chlSab2.chr13 C 0 I 256 s manLeu1.NW_012106474v1 8189384 2 - 10857215 GG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15583538 2 - 23502949 GG i colAng1.NW_012114488v1 C 0 I 127 e otoGar3.GL873575 10928459 3032 - 12073884 I e saiBol1.JH378287 1267360 0 - 2905041 C e aotNan1.NW_018494782v1 1473831 4874 - 1813869 M e cebCap1.NW_016107695v1 1224160 66 - 2164891 I e calJac3.chr4 169849568 0 + 171630274 C e dasNov3.JH569188 534991 278 + 760995 I e canFam3.chr1 56152259 104 + 122678785 I e panPan2.chr6 171761277 4527 + 173848474 M a score=1161.000000 s hg38.chr6_KB021644v2_alt 76042 2 + 185823 ag s gorGor5.CYUI01015032v1 11448439 2 - 12463322 GG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156276797 2 + 157873769 GG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170303371 1 + 172585720 -G i rheMac8.chr4 C 0 I 159 s macFas5.chr4 169049405 1 - 170955103 -A i macFas5.chr4 C 0 I 1 s macNem1.NW_012011000v1 8335978 1 + 10161646 -G i macNem1.NW_012011000v1 C 0 I 1 s manLeu1.NW_012106474v1 8189386 2 - 10857215 GG i manLeu1.NW_012106474v1 C 0 C 0 e otoGar3.GL873575 10928459 3032 - 12073884 I e saiBol1.JH378287 1267360 0 - 2905041 C e aotNan1.NW_018494782v1 1473831 4874 - 1813869 M e cebCap1.NW_016107695v1 1224160 66 - 2164891 I e calJac3.chr4 169849568 0 + 171630274 C e dasNov3.JH569188 534991 278 + 760995 I e colAng1.NW_012114488v1 15583540 127 - 23502949 I e canFam3.chr1 56152259 104 + 122678785 I e chlSab2.chr13 96644970 256 + 98384682 I e cerAty1.NW_012002071v1 1365943 199 + 3144229 I e panPan2.chr6 171761277 4527 + 173848474 M e panTro5.chr6 173510839 0 + 175400573 C a score=2865.000000 s hg38.chr6_KB021644v2_alt 76044 2 + 185823 ac s gorGor5.CYUI01015032v1 11448441 2 - 12463322 AC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156276799 2 + 157873769 AC i nomLeu3.chr3 C 0 I 46 s macFas5.chr4 169049407 2 - 170955103 AC i macFas5.chr4 I 1 I 12 s macNem1.NW_012011000v1 8335980 2 + 10161646 AC i macNem1.NW_012011000v1 I 1 I 193 s manLeu1.NW_012106474v1 8189388 2 - 10857215 AC i manLeu1.NW_012106474v1 C 0 C 0 e otoGar3.GL873575 10928459 3032 - 12073884 I e saiBol1.JH378287 1267360 0 - 2905041 C e aotNan1.NW_018494782v1 1473831 4874 - 1813869 M e cebCap1.NW_016107695v1 1224160 66 - 2164891 I e calJac3.chr4 169849568 0 + 171630274 C e dasNov3.JH569188 534991 278 + 760995 I e colAng1.NW_012114488v1 15583540 127 - 23502949 I e canFam3.chr1 56152259 104 + 122678785 I e chlSab2.chr13 96644970 256 + 98384682 I e cerAty1.NW_012002071v1 1365943 199 + 3144229 I e rheMac8.chr4 170303372 159 + 172585720 I e panPan2.chr6 171761277 4527 + 173848474 M e panTro5.chr6 173510839 0 + 175400573 C a score=2300.000000 s hg38.chr6_KB021644v2_alt 76046 1 + 185823 a s panTro5.chr6 173510839 1 + 175400573 g i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11448443 1 - 12463322 A i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156276847 1 + 157873769 A i nomLeu3.chr3 I 46 C 0 s rheMac8.chr4 170303531 1 + 172585720 A i rheMac8.chr4 I 159 C 0 s macFas5.chr4 169049421 1 - 170955103 A i macFas5.chr4 I 12 C 0 s macNem1.NW_012011000v1 8336175 1 + 10161646 A i macNem1.NW_012011000v1 I 193 C 0 s chlSab2.chr13 96645226 1 + 98384682 A i chlSab2.chr13 I 256 C 0 s manLeu1.NW_012106474v1 8189390 1 - 10857215 A i manLeu1.NW_012106474v1 C 0 I 310 e otoGar3.GL873575 10928459 3032 - 12073884 I e saiBol1.JH378287 1267360 0 - 2905041 C e aotNan1.NW_018494782v1 1473831 4874 - 1813869 M e cebCap1.NW_016107695v1 1224160 66 - 2164891 I e calJac3.chr4 169849568 0 + 171630274 C e dasNov3.JH569188 534991 278 + 760995 I e colAng1.NW_012114488v1 15583540 127 - 23502949 I e canFam3.chr1 56152259 104 + 122678785 I e cerAty1.NW_012002071v1 1365943 199 + 3144229 I e panPan2.chr6 171761277 4527 + 173848474 M a score=38412.000000 s hg38.chr6_KB021644v2_alt 76047 6 + 185823 gacagg s panTro5.chr6 173510840 6 + 175400573 gacagg i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11448444 6 - 12463322 GACAGG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156276848 6 + 157873769 GACAGG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170303532 6 + 172585720 GACAGG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169049422 6 - 170955103 GACAGG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8336176 6 + 10161646 GACAGG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1366142 6 + 3144229 GACAGG i cerAty1.NW_012002071v1 I 199 C 0 s chlSab2.chr13 96645227 6 + 98384682 GACAGG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8189701 6 - 10857215 GACAGG i manLeu1.NW_012106474v1 I 310 C 0 s colAng1.NW_012114488v1 15583667 6 - 23502949 GACAGG i colAng1.NW_012114488v1 I 127 C 0 s calJac3.chr4 169849568 6 + 171630274 gacagg i calJac3.chr4 C 0 C 0 e otoGar3.GL873575 10928459 3032 - 12073884 I e saiBol1.JH378287 1267360 0 - 2905041 C e aotNan1.NW_018494782v1 1473831 4874 - 1813869 M e cebCap1.NW_016107695v1 1224160 66 - 2164891 I e dasNov3.JH569188 534991 278 + 760995 I e canFam3.chr1 56152259 104 + 122678785 I e panPan2.chr6 171761277 4527 + 173848474 M a score=93020.000000 s hg38.chr6_KB021644v2_alt 76053 14 + 185823 agggagggatgggG s panTro5.chr6 173510846 14 + 175400573 agggagggatgggg i panTro5.chr6 C 0 I 23446 s panPan2.chr6 171765885 13 + 173848474 AGGGAGGGATGGG- i panPan2.chr6 M 4527 C 0 s gorGor5.CYUI01015032v1 11448450 14 - 12463322 AGGGAGGGATGGGG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156276854 14 + 157873769 AGGGAGGGATGGGG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170303538 14 + 172585720 AGGGAGGGATGGGG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169049428 14 - 170955103 AGGGAGGGATGGGG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8336182 14 + 10161646 AGGGAGGGATGGGG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1366148 14 + 3144229 AGGGAGGGATGGGG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96645233 14 + 98384682 AGGGAGGGATGGGG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8189707 14 - 10857215 AGGGAGGGATGGGG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15583673 14 - 23502949 AGGGAGGGATGGGG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169849574 14 + 171630274 aagaagggatggga i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1267360 6 - 2905041 ----aggggT---- i saiBol1.JH378287 C 0 C 0 e otoGar3.GL873575 10928459 3032 - 12073884 I e aotNan1.NW_018494782v1 1473831 4874 - 1813869 M e cebCap1.NW_016107695v1 1224160 66 - 2164891 I e dasNov3.JH569188 534991 278 + 760995 I e canFam3.chr1 56152259 104 + 122678785 I a score=-850.000000 s hg38.chr6_KB021644v2_alt 76067 1 + 185823 T s panTro5.chr6 1882553 1 - 175400573 T i panTro5.chr6 n 23446 C 0 s panPan2.chr6 171765898 1 + 173848474 T i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11448464 1 - 12463322 T i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156276868 1 + 157873769 G i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170303552 1 + 172585720 G i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169049442 1 - 170955103 G i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8336196 1 + 10161646 G i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1366162 1 + 3144229 G i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96645247 1 + 98384682 G i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8189721 1 - 10857215 G i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15583687 1 - 23502949 G i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169849588 1 + 171630274 T i calJac3.chr4 C 0 M 4290 e otoGar3.GL873575 10928459 3032 - 12073884 I e saiBol1.JH378287 1267366 0 - 2905041 C e aotNan1.NW_018494782v1 1473831 4874 - 1813869 M e cebCap1.NW_016107695v1 1224160 66 - 2164891 I e dasNov3.JH569188 534991 278 + 760995 I e canFam3.chr1 56152259 104 + 122678785 I a score=81294.000000 s hg38.chr6_KB021644v2_alt 76068 14 + 185823 ACAGGAGGATCTCA s panTro5.chr6 1882554 14 - 175400573 ACAGGAGGATCTCA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171765899 14 + 173848474 ACAGGAGGATCTCA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11448465 14 - 12463322 ACAGGAGGATCTCA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156276869 14 + 157873769 ACAGGAGGATCTCA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170303553 14 + 172585720 ACAGGAGGATCTCA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169049443 14 - 170955103 ACAGGAGGATCTCA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8336197 14 + 10161646 ACAGGAGGATCTCA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1366163 14 + 3144229 ACAGGAGGATCTCA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96645248 14 + 98384682 ACAGGAGGATCTCA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8189722 14 - 10857215 ACAGGAGGATCTCA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15583688 14 - 23502949 ACAGGAGGATCTCA i colAng1.NW_012114488v1 C 0 C 0 s saiBol1.JH378287 1267366 3 - 2905041 ---------TTT-- i saiBol1.JH378287 C 0 C 0 e otoGar3.GL873575 10928459 3032 - 12073884 I e aotNan1.NW_018494782v1 1473831 4874 - 1813869 M e cebCap1.NW_016107695v1 1224160 66 - 2164891 I e calJac3.chr4 169849589 4290 + 171630274 M e dasNov3.JH569188 534991 278 + 760995 I e canFam3.chr1 56152259 104 + 122678785 I a score=224354.000000 s hg38.chr6_KB021644v2_alt 76082 35 + 185823 GCTGGGGGACAGGAGGGATGAGACAGGGTAGTTGG s panTro5.chr6 1882568 35 - 175400573 GCTGGGGGACAGGAGGGATGAGACAGGGTAGTTGG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171765913 35 + 173848474 GCTGGGGGACAGGAGGGATGAGACAGGGTAGTTGG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11448479 35 - 12463322 GCTGGGGGACAGGAGGGATGAGACAGGGTATTTGG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156276883 35 + 157873769 GCTGGCGGACAGGAGGGATGAGACAGGGTAGTTGG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170303567 35 + 172585720 GCTGCAGGACAGGTGGAATGAGATGGGGTAGTTGG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169049457 35 - 170955103 GCTGCAGGACAGGTGGAATGAGATGGAGTAGTTGG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8336211 35 + 10161646 GCTGCAGGACAGGTGGAATGAGATGGGGTAGTTGG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1366177 35 + 3144229 GCTGCAGGACAGGTGGGATGAGATGGGGTAGTTGG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96645262 35 + 98384682 GCTCCAGGACAGGAGGGATGAGATGGGGTAGTTGG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8189736 35 - 10857215 GCTGCAGGACAGGTGGGATGAGATGGGGTAGTTGG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15583702 34 - 23502949 GCTGTAGGACAGGAGGGATGAG-TGGGGTAGTTGG i colAng1.NW_012114488v1 C 0 C 0 s saiBol1.JH378287 1267369 34 - 2905041 GCTGGGGGACAGGAAGGA-GGGATGGGGTAGCTGG i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1224226 34 - 2164891 GCTGGGGGACAGGAGGGA-GGGATCGTGTAGTTGG i cebCap1.NW_016107695v1 I 66 C 0 e otoGar3.GL873575 10928459 3032 - 12073884 I e aotNan1.NW_018494782v1 1473831 4874 - 1813869 M e calJac3.chr4 169849589 4290 + 171630274 M e dasNov3.JH569188 534991 278 + 760995 I e canFam3.chr1 56152259 104 + 122678785 I a score=3090540.000000 s hg38.chr6_KB021644v2_alt 76117 422 + 185823 GCTTCCAGAAAGGCCAAGGAGAGCTTCTCTGGAGTCTGTACAGAAGCAG--GAAGCTCAGTGAGGACACCCCTGGGATCCTGCTGATGAGGGAGAAGAGAGCTTTACACTCAGGCCCAGGCTGTCCCCGCTGGCTGCTGTGGCGCTCGGCTCTGGGAGAGGCCCGTGCTGCTTTTCCTGCGCGACACCAGCAGGAGTGATGTGGAGGAGAGGCTGACAGG---CTCAGAAAGTGAGGGACGGGCT-CCATCCAAATCGATGGGCAGTGAAGATTGGCATGGTGCTGAGAGCCCAGGACAGCTGCA-CAGGGACCACACTGACCACGGCACCCACTCAGCATTTTCCCTCGTGGGCCAGGATGCTTATCCTCCTCTGAAGGGAACCCTGTCAGTGCTGACCA----------TCTTTTACCAGGTATTGGAGGATGCTTA s panTro5.chr6 1882603 422 - 175400573 GCTTCCAGAAAGGCCAAGGAGAGCTTCTCTGGAGTCTGTACAGAAGCAG--GAAGCTCAGTGAGGACGCCCCTGGGATCCTGCTGATGAGGGAGAAGAGAGCTTTACGCTCAGGCCCAGGCTGTCCCCTCTGGCTGCTGTGGCGCTCGGCTCTGGGAGAGGCCCGTGCTGCTTTTCCTGCGCGATGCCAGCAGGAGTGGTGTGGAGGAGAGGCTGACAGG---CTCGGAAAGTGAGGGACGGGCT-CCATCCAAATCAATGGGCAGTGAAGATTGGCATGGGGCTGAGAGCCCAGGACAGCTGCA-CAGGGACCACACTGACCACGGCACCCACTCAGCATTTTCCCTCGTGGGCCAGGATGCTTATCCTTCTCTGAAGGGAACCCTGTCAGTGCTGACCA----------TCTTTTATCAGGTATTGAAGGATGCTTA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171765948 422 + 173848474 GCTTCCAGAGAGGCCAAGGAGAGCTTCTCTGGAGTCTGTACAGAAGCAG--GAAGCTCAGTGAGGACGCCCCTGGGATCCTGCTGATGAGGGAGAAGAGAGCTTTACGCTCAGGCCCAGGCTGTCCCCGCTGGCTGCTGTGGCGCTCGGCTCTGGGAGAGGCCCGTGCTGCTTTTCCTGCGCGATGCCAGCAGGAGTGGTGTGGAGGAGAGGCTGACAGG---CTCGGAAAGTGAGGGACGGGCT-CCATCCAAATCAATGGGCAGTGAAGATTGGCATGGGGCTGAGAGCCCAGGACAGCTGCA-CAGGGACCACACTGACCACGGCACCCACTCAGCATTTTCCCTCGTGGGCCAGGATGCTTATCCTTCTCTGAAGGGAACCCTGTCAGTGCTGACCA----------TCTTTTATCAGGTATTGAAGGATGCTTA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11448514 422 - 12463322 GCTTCCAGAAAGGCCAAGGAGAGCTTCTCTGGAGTCTGTACAGAAGCAG--GAAGCTCAGTGAGGACGCCCCTGGGATCCTGCTGATGAGGGAGAAGAGAGCTTTACACTCAGGCCCAGGCTGTCCCCGCTGGCTGCTGTGGCGCTCGGCTCTGGGAGAGGCCCCTGCTGCTTTTCCTGCACGACACCAGCAGGAGTGATGTGGAGGAGAGGCTGACAGG---CTCGGAAAGTGAGGGACAGGCT-CCATCCAAATCGATGGGCAGTGAAGATTGGCATGGGGCTGAGAGCCCAGGACAGCTGCA-CAGGGACCACACTGACCACGGCACCCACTCAGCATTTTCCCTCGTGGGCCAGGATGCTTATCCTCCTCTAGAGGGAACCCTGTCAGTGCTGACCA----------TCTTTTATCAGGTATTGAAGAATGCTTA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156276918 422 + 157873769 GTTTCCAGAAAGGCCCAGGAGAGTTTCTCTGGAGTCTGGGCAGAAGCAG--GAAGCTCAGCGAGGACACCCCTGGGATCCTGCTGATGAGGGAGAAGAGAGCTTTACACTCAGGCCCAGGCTGTCCCCGCTGGCTGCTGTGGCACTCGGCTCTGGGAGAGGCACGTGCTGCTTTTTCTGTGTGACACCAGCAGGAGTGATGTGGAGGAGAGGCTGACAGA---CTTGGAAAGTGAGGGACGGGCT-CCATCCAAATCGATGGGCAGTGAAGATTGGCATGGGGCTGAGAGCCTGGGACAGCTGCA-CGGGGACCACACTGACCACGGCACCCACTCAGCATCTTCCCTCGTGGGCCAGGATGCTTATCCTCCTCTAAAGGGAGCCCTGTCGATGCTGACCA----------TCTTTTACCAGGTATTGAATGATGCTTA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170303602 421 + 172585720 GTTTCCAGAAAGGCCAAGGAGAGCTTCTTTGGAATCTGTGCAGAAGCAG--GAAGCTCAGTGAGGATGCCCCTGGGATCCTGCTGATGAAGGAGAAGAGAGTTTTACACTCAGGCCCAAGCTGTCCCCACTGGCTGCTGTGGCACTCGACTCTGGGAGAGGCACATGCTGCTTTTCCTGCCTGACACCAGCAGGAGTGATGTGGAGGAGAGGCTGACAGA---CTCGGAAAGTGAGGGACGGGCT-CCATCCAAATCAATGGGCAGTGAAGATTGGCATGGAGCTGACAGCCCAGGACAGCTGCG-CAGGGACCACACTGACCACAGCACCCACTCAGCATCTTCCCATGTGGGCCAGGATGCTTATCCTCCTCTAAAGGGAACCCTGTCCGTGCTGACCG----------TCTTTTACT-GGTATTGAATGATGCTTA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169049492 421 - 170955103 GTTTCCAGAAAGGCCAAGGAGAGCTTCTTTGGAATCTGTGCAGAAGCAG--GAAGCTCAGTGAGGACGCCCCTGGGATCCTGCTGATGAAGGAGAAGAGAGTTTTACACTCAGGCCCAAGCTGTCCCCACTGGCTGCTGTGGCACTCGACTCTGGGAGAGGCACATGCTGCTTTTCCTGCCTGACACCAGCAGGAGTGATGTGGAGGAGAGGCTGACAGA---CTCGGAAAGTGAGGGACGGGCT-CCATCCAAATCAATGGGCAGTGAAGATTGGCATGGAGCTGAGAGCCCAGGACAGCTGCG-CAGGGACCACACTGACCACAGCACCCACTCAGCATCTTCCCATGTGGGCCAGGATGCTTATCCTCCTCTAAAGGGAACCCTGTCCGTGCTGACCG----------TCTTTTACT-GGTATTGAATGATGCTTA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8336246 421 + 10161646 GTTTCCAGAAAGGCCAAGGAGAGCTTCTTTGGAATCTGTGCAGAAGCAG--GAAGCTCAGTGAGGACGCCCCTGGGATCCTGCTGATGAAGGAGAAGAGAGTTTTACACTCAGGCCCAAGCTGTCCCCACTGGCTGCTGTGGCACTCGACTCTGGGAGAGGCACATGCTGCTTTTCCTGACTGACACCAGCAGGAGTGATGTGGAGGAGAGGCTGACAGA---CTCGGAAAGTGAGGGACGGGCT-CCATCCAAATCAATGGGCAGTGAAGATTGGCATGGAGCTGAGAGCCCAGGACAGCTGCG-CAGGGACCACATTGACCACAGCACCCACTCAGCATCTTCCCATGTGGGCCAGGATGCTTATCCTCCTCTAAAGGGAACCCTGTCCGTGCTGACCG----------TCTTTTACT-GGTATTGAATGATGCTTA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1366212 421 + 3144229 GTTTCCAGAAAGGCCAAGGAGAGCTTCTCTGGAATCTGTGCAGAAGCAG--GAAGCTCAGTGAGGACGCCCCTGGGATCCTGCTGATGAAGGAGAAGAGAGCTTTACATTCAGGCCCAGGCTGTCCCCACTGGCTGCTGTGGCACTTGACTCTGGGAGAAGCACGTGCTGCTTTTCCTGCGTGACACCAGCAGGAGTGATGTGGAGGAGAGGCTGACAGA---CTCGGAAAGTGAGGGACGGGCT-CCATCCAAATCAATGGGCAGTGAAGATTGGCGTGAAGCTGAGAGCCCAGGACAGTTGCA-CAGGGATCACACTGACCACAGCACCCACTCAGCATCTTCTCATGTGGGCCGGGATGCTTATCCTCCTCTAAAGGGAACCCTGTCCGTGCTGACCG----------TCTTTTACC-GGTATTCAATTAGGCTTA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96645297 421 + 98384682 GTTTCCAGAAAGGCCAAGGAGAGCTTCTCTGGAATCTGTGCAGAAGCAG--GAAGGTCAGTGAGGACGCCCCTGGGATCCTGCTGATGAAGGAGAAGAGAGCTTTACACTCAGACCCAGGCTGTCCCCACTGGTTGCTGTGGCACTAGACTCTGGGAGACGCACGTGCTGCTTTTCCTGCGTGACACCAGCAGCAGTGATGTGGAGGAGAGGCTGACAGA---CTCGGAAAGTGAGGGACGGGCT-CCATCCAAATCAATGGGCAGTGAAGATTGGCGTGGAGCTGAGAGCCCAGGACAGCTGTG-CAGGGACCACACTGACCACAGCACCCACTCAGCATCTTCCCATGTGGGCCGGGATGCTCATCCTCCTCTAAAGGGAACCCTGTCCGTGCTGACCG----------TCTTTTACT-GGTATTGAATGATGCTTA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8189771 418 - 10857215 GTTTCCAGAAAGGCCAAGGAGAGCTTCTTTGGAATCTGTGCAGAAGCAG--GAAGCTCAGTGAGGACGCCCCTGGGATCCTGCTGATGA---AGAAGAGAGTTTTGCACTCAGGCCCAAGCTGTCCCCACTGGCTGCTGTGGCACTCGACTCTGGGAGAGGCACGTGCTGCTTTTCCTGCCTGACACCAGCAGGAGTGATGTGGAGGAGAGGCTGACAGA---CTCGGAAAGTAAGGGACGGGCT-CCATCCAAATCAATGGGCAGTGAAGATAGGCATGGAGCTGAGAGCCCAGGACAGCTGCG-CAGGGACCACACTGACCACAGCACCCACTCAGCATCTTCCCATGTGGGCCAGGATGCTTATCCTCCTCTAAAGGGAACCCTGTCCGTGCTGACCA----------TCTTTTACC-GGTATTCAGTGATGCTTA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15583736 421 - 23502949 GTTTCCAGAAAGGCCAAGGAGAGCTTCTCTGGAGTCTGTGCAGAAGCAG--GAAGCTCAGTGAGGACACCCCTGGGATCCTGCTGATGAAGGAGAAGAGAGCTTTACACTCAGGCCCAGGCTGTCCCCACTGGCTGCTGTGGCACTCGACTCTGGGAGAGGCATGTGCTGCTTTTCCTGCATGACACCAGCAGGAGTGATGTGGAGGAGAGGCTGACAGA---CTCGGAAAGTGAGGGACGGGCT-CCATCCAAATCAATGGACAGTGAAGATTGGCATGGAGCTGAGAGCCCAGGACAGCTGCA-CAGGGACCACACTGACCACAGCACCCACTCAGCATCTTCCCATGTGGGCCAGGATGCTTATCCTCCTCTAAAGGGAACCCTGTCCGTGCTGACCG----------TCTTTTACC-GGTATTCAGTGATGCTTA i colAng1.NW_012114488v1 C 0 C 0 s saiBol1.JH378287 1267403 422 - 2905041 GTTTCCAGAAAGACCAAGGAGAGCTTCTGTGGAGTCCGCACAGAAGCAGGAGAGGCTCAGTCA-GGAGACCCTGGGACCCTGCAGGTGAGGGAGGAGAGGGCTTTACACTCAAGCCCAGGCTGTCCCCGCCCGCTGCTGTGGTACTGGGCTCTTGGGGAAGCATGTGCCGCTTTTCCTGTGTGACGGCAGCAGTTGTGATGTGGAGGAGGCGCTGCCAGA---CTTGGAAAGAGAGAGGCTGGTTCCCATCCAAATCGATGGGCAGTGAAGACTGGCATGAGCTGGAGAGCCTGGGACAGCT-CC-CAGGGACCGCGCTGACCAC-GCACCCGCTCAGCGTCTTCCCTCGTGGGCCAAGAGGCTCGTCCTCCTCTGGAGGGAGCCCTGTCGGTGCTGACCG----------TCTCTTACCAGGTGTTGAATGATACTCG i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1224260 422 - 2164891 GTTTCCAGAAAGACCAAGGAGAGCTTCTGTGGAGTCCGTGCAGAAGAAG--TAGGCTCAGTTAGGGGGACCCTGGGATCGTGCAGGTGAGGGAGGAGAGGGCTTTACACCCAAGCCCAGGCTGTGCCTGCCGGCTGCTGTGGTACTCAGCTCTTGGGGAGGCATGTGCTGCTTTTCCTGTGTGACGCCAGCAGGAGTGATGTGGAGGAGGGGCTGCCAGA---CTTGGAAAGAGAGAGGTGGGTTCCCATCCAAATCGATGGGCAGTGAAGACTTGCATGAGATGGAGAGCCTGGGACAGCTGCA-CAGGGACGATGCTGAGCAC-GCACCCGCTCAGCGTCTTCCCTCGTGGGCCAGGAGGCTCGTCCTCCTCTGAAGGGAGCCCTGTCGGTGCTGACCG----------TCTCTTACCAGGTATTGAATGATACTCG i cebCap1.NW_016107695v1 C 0 C 0 s canFam3.chr1 56152363 325 + 122678785 GTTTCCAGAAAGGTGGAGATAAGCCTGATGGACCTCAGGTCAGAGGCTG----------GTGCTGA----CCTGTGACCCCCATG---------------GCCTTGGGCTCAC----------TCCCCAGTGA-----GCGGAGCTCTCCATAAGGAGAG---TGTGCCATC------------CACCCGCACGAGC----TGGGAGAGA-GCTTGCAGGTGCCTCCAAC----AGGGACAGGCC-T------------GGGGCACCGAGGA--GGCACGA----GAGAGCTGGGGGCAGCTGCGTCACGGGTGACCCAGATC-CGAC-----CTCGGCA--------------CTGGGACGCTGACCC------AGAGAAGGCTGGGTCAGTGCCGGCTGTGCATTAGTTTGTTTTACC-AGCATTGAACAACCCCAA i canFam3.chr1 I 104 C 0 e otoGar3.GL873575 10928459 3032 - 12073884 I e aotNan1.NW_018494782v1 1473831 4874 - 1813869 M e calJac3.chr4 169849589 4290 + 171630274 M e dasNov3.JH569188 534991 278 + 760995 I a score=370756.000000 s hg38.chr6_KB021644v2_alt 76539 52 + 185823 GCAAAATCCTTTGACCAAAGGCTCGACATTCACAGATTCTAGACGTTCCTAT s panTro5.chr6 1883025 52 - 175400573 GCAAAATCCTTTGACCAAAGGCTCGACATTCACAGATTCTAGACGTTCCTAT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171766370 52 + 173848474 GCAAAATCCTTTGACCAAAGGCTCGACATTCACAGATTCTAGACGTTCCTAT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11448936 52 - 12463322 GCAAAATCCTTTGACCGAAGGCTCGACATTCACAGATTCTAGACGTTCCTAT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156277340 46 + 157873769 GCAAAATCCTTTGACCAAAGGCTCGACATTAACG---TCTA---GTTCCTAT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170304023 52 + 172585720 GCAAAATCCTTCGACCAAAGACTCGACATCAACAGATTCTAGACATTCCTAT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169049913 52 - 170955103 GCAAAATCCTTCGACCAAAGACTCGACATCAACAGATTCTAGACATTCCTAT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8336667 52 + 10161646 GCAAAATCCTTCGACCAAAGACTCGACATCAACAGATTCTAGACATTCCTAT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1366633 52 + 3144229 GCAAAATCCTTCGACCAAAGACTCGACATCAACAGATTCTAGACATTCCTAT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96645718 52 + 98384682 GCAAAATCCTTCGACCAAAGACTGGACATTAACAGATTCTAGACATTCCTAT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8190189 52 - 10857215 GCAAAATCATTCGACCAAAGACTCAACATCAACAGATTCTAGGCATTCCTAT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15584157 52 - 23502949 GCAAAATCCTTCGACCAAAGACTCAACATTAGCAGATTCTAGACATTCCTAT i colAng1.NW_012114488v1 C 0 I 317 s calJac3.chr4 169853886 47 + 171630274 GCAAAATCCTTTGACT-----CTCGACATTAACTGAGTCTAGTCATTCCTGT i calJac3.chr4 M 4290 C 0 s saiBol1.JH378287 1267825 41 - 2905041 GCAAAATCCTTTGACT-----CTCAACATTAA------CTAGACATTCCCAT i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1224682 47 - 2164891 GCAAAACCCTTTGACT-----CTCGACATTAGCTGATTCTAGACATTCCCCG i cebCap1.NW_016107695v1 C 0 C 0 s canFam3.chr1 56152688 46 + 122678785 ACAGAACCCTCAAAT------CTCTACATCAACTAGACGCCAACATCCCTGT i canFam3.chr1 C 0 C 0 e otoGar3.GL873575 10928459 3032 - 12073884 I e aotNan1.NW_018494782v1 1473831 4874 - 1813869 M e dasNov3.JH569188 534991 278 + 760995 I a score=1120433.000000 s hg38.chr6_KB021644v2_alt 76591 140 + 185823 GAAAATACCTACTTATTT---CCACTGGACTGAACTCTGATT------AAAATAAAAACAAGGACACCAGGAAAGACTACACAAAGCCTGTAT-GCCCCATAGTTGCCTCGGAGAACCCAGGAATCATGCAGGTGGGC--CTGGGGAAGCCC s panTro5.chr6 1883077 141 - 175400573 GAAAATACCTACTTATTT---CCACTGGACTGAACTCTGATT------AAAATAAAAACAAGGACACCAGGAAAAACTACGCAAAGCCTGTATTGCCCCATAGTTGCCTCGGAGAACCCAGGAACCATGCAGATGGGC--CTGGGGAAGCCC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171766422 141 + 173848474 GAAAATACCTACTTATTT---CCACTGGACTGAACTCTGATT------AAAATAAAAACAAGGACACCAGGAAAAACTACGCAAAGCCTGTATTGCCCCATAGTTGCCTCGGAGAACCCAGGAACCATGCAGATGGGC--CTGGGGAAGCCC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11448988 141 - 12463322 GAAAATACCTACTTATTT---CCACTGGACTGAACTCTGATT------AAAATAAAAACAAGGACACCAGGAAAAACTACACAAAGCCTGTATTGCCCCATAGTTGCCTCGGAGAACCCAGGAACCATGCAGATGGGC--CTGGGGAAGCCC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156277386 140 + 157873769 GAAAATACCTACTTATTT---CCATTGGACTGAACTCTGATT------AAAATAAAAACAAGGACACCAGGAAAAACTACACAAAGCCTATAT-GCCCCGTAGTTGCCTCGAAGAACCCAGGAACCGTGCAGATGGGC--CTGGGGAAGCCC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170304075 142 + 172585720 GAAAATACCTACTTATTTTAACCATGGGACTGAACTCTGATT------AAAATAAAAACAAGGACACCAGGAAAAACTACACAAAGCCTATAT-GCCCCACAGTTGCCTTGGAGAACCCAGGAACCG-GCAGATAGGC--CTGGGGGAGCCC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169049965 142 - 170955103 GAAAATACCTACTTATTTTAACCATGGGACTGAACTCTGATT------AAAATAAAAACAAGGACACCAGGAAAAACTACACAAAGCCTATAT-GCCCCACAGTTGCCTTGGAGAACCCAGGAACCG-GCAGATAGGC--CTGGGGGAGCTC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8336719 142 + 10161646 GAAAATACCTACTTATTTTAACCATGGGACTGAACTCTGATT------AAAATAAAAACAAGGACACCAGGAAAAACTACACAAAGCCTATAT-GCCCCACAGTTGCCTTGGAGAACCCAGGAACCG-GCAGATAGGC--CTGGGGGAGCCC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1366685 142 + 3144229 GAAAATACCTACTTATTTTAACCATGGGACTGAACTCTGATT------AAAATAAAAACAAGGACACCAGGAAAAACTACACAAAGCCTACAT-GCCCCACAGTTGCCTTGGAGAACCCAGGAACCG-GCAGATAGGC--CTGGGGGAGCCC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96645770 142 + 98384682 GAAAATACCTACTTATTTTAACCATAGGACTGAACTCTGATT------AAAATAAAAACAAGGACACCAGGAAAAACTACACAAAGCCTATAT-GCCCCACAGTTGCCTTGGAGAATCCAGGAACCA-GCAGATAGGC--CTGGGGGAGCCC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8190241 142 - 10857215 GAAAATACCTACTTATTTTAACCATAGGACTAAACTCTGATT------AAAATAAAAACAAGGACACCAGGAAAAACTACACAAAGCCTACAT-GCCCCACAGTTGCCTTGGAGAACCCAGGAACCG-GCAGATAGGC--CTGGGGGAGCCT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15584526 148 - 23502949 gaaaaTACCTACTTATTTTAACCATGGGACTGAACTCTGATTAAAATAAAAATAAAAACAAGGACACCAGGAAAAACTACACAAAGCCTATAT-GCCCCACAGTTGCCTTGGAGAACCCAGGAACCA-GCAGATAGGC--CTGGGGGAGCCC i colAng1.NW_012114488v1 I 317 I 46 s calJac3.chr4 169853933 115 + 171630274 GAAAATACTGACTTATTT---CCA-----TTAAACTCTTATT------AAAATAAAAACAAGGACACGAGGAAAAACTACACAGAGTC---------------------TGGAGAACCCAGGAACCGTGCAGACAGGC--CTGGGGAAGCCC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1267866 120 - 2905041 GAAAATACCGACTTATTT---CCACTGGGTTAAACTCTGATT------AAAATAAAAACAAGGACACCAGGAAAAACTACACAAAGTC---------------------CGGAGAACCCAGGAACCGTGCAGACAGGC--CTGGGGAAGCCC i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1224729 120 - 2164891 GAAAATACCGACTTATTT---CCATTGAGTTAAACTCTGATT------AAAATAAAAACAAGGACACCAGGAAAAACTACACAAAGTC---------------------CAGAGAACCCAGAAACCGTGCAGACAGAC--CTGGGGAAGCTC i cebCap1.NW_016107695v1 C 0 C 0 s canFam3.chr1 56152734 126 + 122678785 GAAAATATCTACAACTTT---CCATCCAACTAGACTTTGACt------aaaataaaataa-----------aaaaaataCACAAAATCCACAT-GCCGTGCAGGTGCCTCCAAGAGCCCAGAA-----GCATCCAAGCGGCTTGGGAATCCT i canFam3.chr1 C 0 C 0 e otoGar3.GL873575 10928459 3032 - 12073884 I e aotNan1.NW_018494782v1 1473831 4874 - 1813869 M e dasNov3.JH569188 534991 278 + 760995 I a score=7385.000000 s hg38.chr6_KB021644v2_alt 76731 2 + 185823 AA s panTro5.chr6 1883218 2 - 175400573 AA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171766563 2 + 173848474 AA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11449129 2 - 12463322 AA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156277526 2 + 157873769 CA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170304217 2 + 172585720 AA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169050107 2 - 170955103 GA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8336861 2 + 10161646 GA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1366827 2 + 3144229 GA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96645912 2 + 98384682 AA i chlSab2.chr13 C 0 I 3 s manLeu1.NW_012106474v1 8190383 2 - 10857215 GA i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169854048 2 + 171630274 GA i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1267986 2 - 2905041 GG i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1224849 2 - 2164891 GA i cebCap1.NW_016107695v1 C 0 C 0 s canFam3.chr1 56152860 2 + 122678785 GG i canFam3.chr1 C 0 C 0 e otoGar3.GL873575 10928459 3032 - 12073884 I e aotNan1.NW_018494782v1 1473831 4874 - 1813869 M e dasNov3.JH569188 534991 278 + 760995 I e colAng1.NW_012114488v1 15584674 46 - 23502949 I a score=29486.000000 s hg38.chr6_KB021644v2_alt 76733 5 + 185823 TGTGT s panTro5.chr6 1883220 5 - 175400573 TGTGT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171766565 5 + 173848474 TGTGT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11449131 5 - 12463322 TGTGT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156277528 5 + 157873769 TGTGT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170304219 5 + 172585720 CATGT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169050109 5 - 170955103 CATGT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8336863 5 + 10161646 CATGT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1366829 5 + 3144229 CATGT i cerAty1.NW_012002071v1 C 0 C 0 s manLeu1.NW_012106474v1 8190385 5 - 10857215 CATGT i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169854050 5 + 171630274 TGTGT i calJac3.chr4 C 0 I 2 s saiBol1.JH378287 1267988 5 - 2905041 TGTGT i saiBol1.JH378287 C 0 I 3 s cebCap1.NW_016107695v1 1224851 5 - 2164891 TGTGT i cebCap1.NW_016107695v1 C 0 I 2 s canFam3.chr1 56152862 5 + 122678785 TTTGT i canFam3.chr1 C 0 C 0 e otoGar3.GL873575 10928459 3032 - 12073884 I e aotNan1.NW_018494782v1 1473831 4874 - 1813869 M e dasNov3.JH569188 534991 278 + 760995 I e colAng1.NW_012114488v1 15584674 46 - 23502949 I e chlSab2.chr13 96645914 3 + 98384682 I a score=5500.000000 s hg38.chr6_KB021644v2_alt 76738 1 + 185823 G s panTro5.chr6 1883225 1 - 175400573 G i panTro5.chr6 C 0 C 0 s panPan2.chr6 171766570 1 + 173848474 G i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11449136 1 - 12463322 G i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156277533 1 + 157873769 G i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170304224 1 + 172585720 G i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169050114 1 - 170955103 G i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8336868 1 + 10161646 G i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1366834 1 + 3144229 G i cerAty1.NW_012002071v1 C 0 C 0 s manLeu1.NW_012106474v1 8190390 1 - 10857215 G i manLeu1.NW_012106474v1 C 0 C 0 s canFam3.chr1 56152867 1 + 122678785 G i canFam3.chr1 C 0 I 33 e otoGar3.GL873575 10928459 3032 - 12073884 I e saiBol1.JH378287 1267993 3 - 2905041 I e aotNan1.NW_018494782v1 1473831 4874 - 1813869 M e cebCap1.NW_016107695v1 1224856 2 - 2164891 I e calJac3.chr4 169854055 2 + 171630274 I e dasNov3.JH569188 534991 278 + 760995 I e colAng1.NW_012114488v1 15584674 46 - 23502949 I e chlSab2.chr13 96645914 3 + 98384682 I a score=5590.000000 s hg38.chr6_KB021644v2_alt 76739 3 + 185823 TGA s panTro5.chr6 1883226 3 - 175400573 TGA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171766571 3 + 173848474 TGA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11449137 3 - 12463322 TGA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156277534 3 + 157873769 TGA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170304225 3 + 172585720 TGA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169050115 3 - 170955103 TGA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8336869 3 + 10161646 TGA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1366835 3 + 3144229 TGA i cerAty1.NW_012002071v1 C 0 C 0 s manLeu1.NW_012106474v1 8190391 3 - 10857215 TGA i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169854057 1 + 171630274 -G- i calJac3.chr4 I 2 C 0 s cebCap1.NW_016107695v1 1224858 1 - 2164891 -G- i cebCap1.NW_016107695v1 I 2 C 0 e otoGar3.GL873575 10928459 3032 - 12073884 I e saiBol1.JH378287 1267993 3 - 2905041 I e aotNan1.NW_018494782v1 1473831 4874 - 1813869 M e dasNov3.JH569188 534991 278 + 760995 I e colAng1.NW_012114488v1 15584674 46 - 23502949 I e canFam3.chr1 56152868 33 + 122678785 I e chlSab2.chr13 96645914 3 + 98384682 I a score=33466.000000 s hg38.chr6_KB021644v2_alt 76742 5 + 185823 CACCA s panTro5.chr6 1883229 5 - 175400573 CACCA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171766574 5 + 173848474 CACCA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11449140 5 - 12463322 CATCA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156277537 5 + 157873769 CACCA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170304228 5 + 172585720 CACCA i rheMac8.chr4 C 0 I 264 s macFas5.chr4 169050118 5 - 170955103 CACCA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8336872 5 + 10161646 CACCA i macNem1.NW_012011000v1 C 0 I 156 s cerAty1.NW_012002071v1 1366838 5 + 3144229 CACCA i cerAty1.NW_012002071v1 C 0 C 0 s manLeu1.NW_012106474v1 8190394 5 - 10857215 CACCA i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169854058 5 + 171630274 CAGCA i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1267996 5 - 2905041 CACCA i saiBol1.JH378287 I 3 C 0 s cebCap1.NW_016107695v1 1224859 5 - 2164891 CACCA i cebCap1.NW_016107695v1 C 0 C 0 e otoGar3.GL873575 10928459 3032 - 12073884 I e aotNan1.NW_018494782v1 1473831 4874 - 1813869 M e dasNov3.JH569188 534991 278 + 760995 I e colAng1.NW_012114488v1 15584674 46 - 23502949 I e canFam3.chr1 56152868 33 + 122678785 I e chlSab2.chr13 96645914 3 + 98384682 I a score=6935.000000 s hg38.chr6_KB021644v2_alt 76747 2 + 185823 TG s panTro5.chr6 1883234 2 - 175400573 TG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171766579 2 + 173848474 TG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11449145 2 - 12463322 TG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156277542 2 + 157873769 TG i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169050123 2 - 170955103 CG i macFas5.chr4 C 0 C 0 s cerAty1.NW_012002071v1 1366843 2 + 3144229 TG i cerAty1.NW_012002071v1 C 0 C 0 s manLeu1.NW_012106474v1 8190399 2 - 10857215 CG i manLeu1.NW_012106474v1 C 0 I 108 s calJac3.chr4 169854063 2 + 171630274 CG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1268001 2 - 2905041 CG i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1224864 2 - 2164891 CG i cebCap1.NW_016107695v1 C 0 C 0 e otoGar3.GL873575 10928459 3032 - 12073884 I e aotNan1.NW_018494782v1 1473831 4874 - 1813869 M e dasNov3.JH569188 534991 278 + 760995 I e colAng1.NW_012114488v1 15584674 46 - 23502949 I e canFam3.chr1 56152868 33 + 122678785 I e chlSab2.chr13 96645914 3 + 98384682 I e macNem1.NW_012011000v1 8336877 156 + 10161646 I e rheMac8.chr4 170304233 264 + 172585720 I a score=1560.000000 s hg38.chr6_KB021644v2_alt 76749 1 + 185823 T s panTro5.chr6 1883236 1 - 175400573 T i panTro5.chr6 C 0 C 0 s panPan2.chr6 171766581 1 + 173848474 T i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11449147 1 - 12463322 T i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156277544 1 + 157873769 T i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169050125 1 - 170955103 T i macFas5.chr4 C 0 C 0 s cerAty1.NW_012002071v1 1366845 1 + 3144229 T i cerAty1.NW_012002071v1 C 0 I 694 s calJac3.chr4 169854065 1 + 171630274 C i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1268003 1 - 2905041 C i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1224866 1 - 2164891 C i cebCap1.NW_016107695v1 C 0 C 0 e otoGar3.GL873575 10928459 3032 - 12073884 I e aotNan1.NW_018494782v1 1473831 4874 - 1813869 M e dasNov3.JH569188 534991 278 + 760995 I e colAng1.NW_012114488v1 15584674 46 - 23502949 I e canFam3.chr1 56152868 33 + 122678785 I e chlSab2.chr13 96645914 3 + 98384682 I e manLeu1.NW_012106474v1 8190401 108 - 10857215 I e macNem1.NW_012011000v1 8336877 156 + 10161646 I e rheMac8.chr4 170304233 264 + 172585720 I a score=8100.000000 s hg38.chr6_KB021644v2_alt 76750 8 + 185823 -GGGGCTGG s panTro5.chr6 1883237 8 - 175400573 -GGGGCTGG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171766582 8 + 173848474 -GGGGCTGG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11449148 8 - 12463322 -GGGGCTGG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156277545 8 + 157873769 -GGGGCTGG i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169050126 7 - 170955103 --AACCCAG i macFas5.chr4 C 0 I 29 s calJac3.chr4 169854066 9 + 171630274 AGGGGCTGG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1268004 9 - 2905041 AGGGGCCGG i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1224867 1 - 2164891 A-------- i cebCap1.NW_016107695v1 C 0 C 0 e otoGar3.GL873575 10928459 3032 - 12073884 I e aotNan1.NW_018494782v1 1473831 4874 - 1813869 M e dasNov3.JH569188 534991 278 + 760995 I e colAng1.NW_012114488v1 15584674 46 - 23502949 I e canFam3.chr1 56152868 33 + 122678785 I e chlSab2.chr13 96645914 3 + 98384682 I e cerAty1.NW_012002071v1 1366846 694 + 3144229 I e manLeu1.NW_012106474v1 8190401 108 - 10857215 I e macNem1.NW_012011000v1 8336877 156 + 10161646 I e rheMac8.chr4 170304233 264 + 172585720 I a score=4362.000000 s hg38.chr6_KB021644v2_alt 76758 4 + 185823 CGCA s panTro5.chr6 1883245 4 - 175400573 CGCA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171766590 4 + 173848474 CGCA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11449156 4 - 12463322 TGCA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156277553 4 + 157873769 CGCA i nomLeu3.chr3 C 0 C 0 s calJac3.chr4 169854075 4 + 171630274 CGTG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1268013 4 - 2905041 TGTG i saiBol1.JH378287 C 0 C 0 e otoGar3.GL873575 10928459 3032 - 12073884 I e aotNan1.NW_018494782v1 1473831 4874 - 1813869 M e cebCap1.NW_016107695v1 1224868 0 - 2164891 C e dasNov3.JH569188 534991 278 + 760995 I e colAng1.NW_012114488v1 15584674 46 - 23502949 I e canFam3.chr1 56152868 33 + 122678785 I e chlSab2.chr13 96645914 3 + 98384682 I e cerAty1.NW_012002071v1 1366846 694 + 3144229 I e manLeu1.NW_012106474v1 8190401 108 - 10857215 I e macNem1.NW_012011000v1 8336877 156 + 10161646 I e rheMac8.chr4 170304233 264 + 172585720 I e macFas5.chr4 169050133 29 - 170955103 I a score=63977.000000 s hg38.chr6_KB021644v2_alt 76762 20 + 185823 TCCCTGCTCTGACATGTGTG s panTro5.chr6 1883249 18 - 175400573 TCCCTGCTGTGA--TGTGTG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171766594 18 + 173848474 TCCCTGCTGTGA--TGTGTG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11449160 18 - 12463322 TCCCTGCTGTGA--CGTGTG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156277557 20 + 157873769 TCCCTGCTGTGACTTGTGTG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170304497 20 + 172585720 TCCCTGCTGTGACACGTGTG i rheMac8.chr4 I 264 C 0 s macNem1.NW_012011000v1 8337033 20 + 10161646 TCCCTGCTGTGACACGTGTG i macNem1.NW_012011000v1 I 156 C 0 s cerAty1.NW_012002071v1 1367540 20 + 3144229 TCCCTGCTGTGACACGTGTG i cerAty1.NW_012002071v1 I 694 C 0 s calJac3.chr4 169854079 20 + 171630274 TCCCTGCTGTGAGGTGTGTG i calJac3.chr4 C 0 I 20 s saiBol1.JH378287 1268017 20 - 2905041 TCCCTGCTGTGACATGTGTG i saiBol1.JH378287 C 0 T 44 e otoGar3.GL873575 10928459 3032 - 12073884 I e aotNan1.NW_018494782v1 1473831 4874 - 1813869 M e cebCap1.NW_016107695v1 1224868 0 - 2164891 C e dasNov3.JH569188 534991 278 + 760995 I e colAng1.NW_012114488v1 15584674 46 - 23502949 I e canFam3.chr1 56152868 33 + 122678785 I e chlSab2.chr13 96645914 3 + 98384682 I e manLeu1.NW_012106474v1 8190401 108 - 10857215 I e macFas5.chr4 169050133 29 - 170955103 I a score=39687.000000 s hg38.chr6_KB021644v2_alt 76782 13 + 185823 TATCCCTGCCGTG s panTro5.chr6 1883267 13 - 175400573 TATCCCTGCTGTG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171766612 13 + 173848474 TATCCCTGCCGTG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11449178 13 - 12463322 TATCCCTGCCGTG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156277577 13 + 157873769 TATCTCTGCCGTG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170304517 13 + 172585720 TATCTCTGCCGTG i rheMac8.chr4 C 0 C 0 s macNem1.NW_012011000v1 8337053 13 + 10161646 TATCTCTGCCGTG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1367560 13 + 3144229 TATCTCTGCCGTG i cerAty1.NW_012002071v1 C 0 C 0 s calJac3.chr4 169854119 13 + 171630274 TGTCCCTGCTGTG i calJac3.chr4 I 20 I 14 e otoGar3.GL873575 10928459 3032 - 12073884 I e saiBol1.JH378287 1268037 44 - 2905041 T e aotNan1.NW_018494782v1 1473831 4874 - 1813869 M e cebCap1.NW_016107695v1 1224868 0 - 2164891 C e dasNov3.JH569188 534991 278 + 760995 I e colAng1.NW_012114488v1 15584674 46 - 23502949 I e canFam3.chr1 56152868 33 + 122678785 I e chlSab2.chr13 96645914 3 + 98384682 I e manLeu1.NW_012106474v1 8190401 108 - 10857215 I e macFas5.chr4 169050133 29 - 170955103 I a score=4095.000000 s hg38.chr6_KB021644v2_alt 76795 1 + 185823 A s panTro5.chr6 1883280 1 - 175400573 A i panTro5.chr6 C 0 C 0 s panPan2.chr6 171766625 1 + 173848474 A i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11449191 1 - 12463322 A i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156277590 1 + 157873769 A i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170304530 1 + 172585720 A i rheMac8.chr4 C 0 I 2 s macNem1.NW_012011000v1 8337066 1 + 10161646 A i macNem1.NW_012011000v1 C 0 I 16 s cerAty1.NW_012002071v1 1367573 1 + 3144229 A i cerAty1.NW_012002071v1 C 0 I 16 s calJac3.chr4 169854146 1 + 171630274 A i calJac3.chr4 I 14 C 0 s aotNan1.NW_018494782v1 1478821 1 - 1813869 A i aotNan1.NW_018494782v1 M 4874 C 0 e otoGar3.GL873575 10928459 3032 - 12073884 I e saiBol1.JH378287 1268037 44 - 2905041 T e cebCap1.NW_016107695v1 1224868 0 - 2164891 C e dasNov3.JH569188 534991 278 + 760995 I e colAng1.NW_012114488v1 15584674 46 - 23502949 I e canFam3.chr1 56152868 33 + 122678785 I e chlSab2.chr13 96645914 3 + 98384682 I e manLeu1.NW_012106474v1 8190401 108 - 10857215 I e macFas5.chr4 169050133 29 - 170955103 I a score=-7413.000000 s hg38.chr6_KB021644v2_alt 76796 11 + 185823 TGTGT----------------------------------------------------------------------------------------------GGGGCT s panTro5.chr6 1883281 11 - 175400573 TGTGT----------------------------------------------------------------------------------------------GGGGCT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171766626 10 + 173848474 TGTGT-----------------------------------------------------------------------------------------------GGGCT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11449192 11 - 12463322 TGTGT----------------------------------------------------------------------------------------------GGGGCT i gorGor5.CYUI01015032v1 C 0 I 41 s nomLeu3.chr3 156277591 105 + 157873769 TGTGTGACACCACCTGGGGCTGGTGTGTCCCTGTTGTGACGTGTGTGACACCACGTGGGGGCTGGTGTGTCTCTGCTGTGATGTGTGTAACACCGCATGGGGGCT i nomLeu3.chr3 C 0 C 0 s calJac3.chr4 169854147 10 + 171630274 TGT-G----------------------------------------------------------------------------------------------GGGGCC i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1224868 6 - 2164891 ---------------------------------------------------------------------------------------------------GGGGCC i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1478822 11 - 1813869 TGTGG----------------------------------------------------------------------------------------------GGGGCC i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10928459 3032 - 12073884 I e saiBol1.JH378287 1268037 44 - 2905041 T e dasNov3.JH569188 534991 278 + 760995 I e colAng1.NW_012114488v1 15584674 46 - 23502949 I e canFam3.chr1 56152868 33 + 122678785 I e chlSab2.chr13 96645914 3 + 98384682 I e cerAty1.NW_012002071v1 1367574 16 + 3144229 I e manLeu1.NW_012106474v1 8190401 108 - 10857215 I e macNem1.NW_012011000v1 8337067 16 + 10161646 I e rheMac8.chr4 170304531 2 + 172585720 I e macFas5.chr4 169050133 29 - 170955103 I a score=9953.000000 s hg38.chr6_KB021644v2_alt 76807 5 + 185823 GGCAC s panTro5.chr6 1883292 5 - 175400573 GGCAC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171766636 5 + 173848474 GGCAC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11449244 5 - 12463322 GGCGT i gorGor5.CYUI01015032v1 I 41 C 0 s nomLeu3.chr3 156277696 5 + 157873769 GGCGT i nomLeu3.chr3 C 0 C 0 s calJac3.chr4 169854157 5 + 171630274 GGCGT i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1224874 5 - 2164891 GGCGT i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1478833 5 - 1813869 GGCGT i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10928459 3032 - 12073884 I e saiBol1.JH378287 1268037 44 - 2905041 T e dasNov3.JH569188 534991 278 + 760995 I e colAng1.NW_012114488v1 15584674 46 - 23502949 I e canFam3.chr1 56152868 33 + 122678785 I e chlSab2.chr13 96645914 3 + 98384682 I e cerAty1.NW_012002071v1 1367574 16 + 3144229 I e manLeu1.NW_012106474v1 8190401 108 - 10857215 I e macNem1.NW_012011000v1 8337067 16 + 10161646 I e rheMac8.chr4 170304531 2 + 172585720 I e macFas5.chr4 169050133 29 - 170955103 I a score=38304.000000 s hg38.chr6_KB021644v2_alt 76812 11 + 185823 GTCCCTGCTGT s panTro5.chr6 1883297 11 - 175400573 GTCCCTGCTGT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171766641 11 + 173848474 GTCCCTGCTGT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11449249 11 - 12463322 GTCCCTGCTGT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156277701 11 + 157873769 GTCCCTGCTGT i nomLeu3.chr3 C 0 C 0 s manLeu1.NW_012106474v1 8190509 11 - 10857215 GTCCCTGCTGT i manLeu1.NW_012106474v1 I 108 C 0 s calJac3.chr4 169854162 11 + 171630274 GTCCCTGCTGT i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1224879 11 - 2164891 GTCCCTGCTGT i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1478838 11 - 1813869 GTCCCTGCTGT i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10928459 3032 - 12073884 I e saiBol1.JH378287 1268037 44 - 2905041 T e dasNov3.JH569188 534991 278 + 760995 I e colAng1.NW_012114488v1 15584674 46 - 23502949 I e canFam3.chr1 56152868 33 + 122678785 I e chlSab2.chr13 96645914 3 + 98384682 I e cerAty1.NW_012002071v1 1367574 16 + 3144229 I e macNem1.NW_012011000v1 8337067 16 + 10161646 I e rheMac8.chr4 170304531 2 + 172585720 I e macFas5.chr4 169050133 29 - 170955103 I a score=30412.000000 s hg38.chr6_KB021644v2_alt 76823 8 + 185823 GACATGTG s panTro5.chr6 1883308 8 - 175400573 GACATGTG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171766652 8 + 173848474 GACATGTG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11449260 8 - 12463322 GACATGTG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156277712 8 + 157873769 GACATGTG i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169050162 8 - 170955103 GACATGTG i macFas5.chr4 I 29 C 0 s manLeu1.NW_012106474v1 8190520 8 - 10857215 GACATGTG i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169854173 8 + 171630274 GAGGTGTG i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1224890 8 - 2164891 GACATGTG i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1478849 8 - 1813869 GACGTGTG i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10928459 3032 - 12073884 I e saiBol1.JH378287 1268037 44 - 2905041 T e dasNov3.JH569188 534991 278 + 760995 I e colAng1.NW_012114488v1 15584674 46 - 23502949 I e canFam3.chr1 56152868 33 + 122678785 I e chlSab2.chr13 96645914 3 + 98384682 I e cerAty1.NW_012002071v1 1367574 16 + 3144229 I e macNem1.NW_012011000v1 8337067 16 + 10161646 I e rheMac8.chr4 170304531 2 + 172585720 I a score=28007.000000 s hg38.chr6_KB021644v2_alt 76831 9 + 185823 TGACACCAC s panTro5.chr6 1883316 9 - 175400573 TGACACCAT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171766660 9 + 173848474 TGACACCAC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11449268 9 - 12463322 TGACACCAC i gorGor5.CYUI01015032v1 C 0 T 80 s nomLeu3.chr3 156277720 9 + 157873769 TGACACCAC i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169050170 9 - 170955103 TGACACCAC i macFas5.chr4 C 0 C 0 s manLeu1.NW_012106474v1 8190528 9 - 10857215 TAACACCAC i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169854181 9 + 171630274 TGACCCCAT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1267993 9 - 2905041 CAGCACCAC i saiBol1.JH378287 T 44 C 0 s cebCap1.NW_016107695v1 1224898 8 - 2164891 -TGACCCAT i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1478857 9 - 1813869 TGACCCCAT i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10928459 3032 - 12073884 I e dasNov3.JH569188 534991 278 + 760995 I e colAng1.NW_012114488v1 15584674 46 - 23502949 I e canFam3.chr1 56152868 33 + 122678785 I e chlSab2.chr13 96645914 3 + 98384682 I e cerAty1.NW_012002071v1 1367574 16 + 3144229 I e macNem1.NW_012011000v1 8337067 16 + 10161646 I e rheMac8.chr4 170304531 2 + 172585720 I a score=9158.000000 s hg38.chr6_KB021644v2_alt 76840 9 + 185823 GT------GGGGCCG s panTro5.chr6 1883325 9 - 175400573 GT------GGGGCTG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171766669 9 + 173848474 GT------GGGGCTG i panPan2.chr6 C 0 C 0 s nomLeu3.chr3 156277729 9 + 157873769 GT------TGGGCCA i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169050179 15 - 170955103 GTAACCCAGGAACCG i macFas5.chr4 C 0 C 0 s manLeu1.NW_012106474v1 8190537 9 - 10857215 AT------GGGGCTG i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169854190 10 + 171630274 -----GTGGGGGCTG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1268002 10 - 2905041 -----GCAGGGGCCG i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1224906 10 - 2164891 -----GTGGGGGCCG i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1478866 10 - 1813869 -----GTGGGGCCCG i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10928459 3032 - 12073884 I e dasNov3.JH569188 534991 278 + 760995 I e colAng1.NW_012114488v1 15584674 46 - 23502949 I e canFam3.chr1 56152868 33 + 122678785 I e chlSab2.chr13 96645914 3 + 98384682 I e cerAty1.NW_012002071v1 1367574 16 + 3144229 I e macNem1.NW_012011000v1 8337067 16 + 10161646 I e rheMac8.chr4 170304531 2 + 172585720 I e gorGor5.CYUI01015032v1 11449277 80 - 12463322 T a score=69854.000000 s hg38.chr6_KB021644v2_alt 76849 21 + 185823 GCGTGTCCCTGCTGTGACAAG s panTro5.chr6 1883334 21 - 175400573 GCGTGTCCCTGCTGTGACATG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171766678 21 + 173848474 GTGTGTCCCTGCTGTGACATG i panPan2.chr6 C 0 C 0 s nomLeu3.chr3 156277738 21 + 157873769 GTGTGTCCCTGCTGTGACGTG i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169050194 9 - 170955103 GCA------------GATAGG i macFas5.chr4 C 0 C 0 s chlSab2.chr13 96645917 21 + 98384682 GCGTGTCCCTGCTGTGACAAG i chlSab2.chr13 I 3 C 0 s manLeu1.NW_012106474v1 8190546 21 - 10857215 GCGTGTCCCTGCCGTGACACG i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169854200 19 + 171630274 GCGTGTCCCTGCTGTG--AGG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1268012 21 - 2905041 GTGTGTCCCTGCTGTGACATG i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1224916 21 - 2164891 GCGTGTCCCTGCTGTGACATG i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1478876 21 - 1813869 GCGTGTCCCTGCTGTGACGTG i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10928459 3032 - 12073884 I e dasNov3.JH569188 534991 278 + 760995 I e colAng1.NW_012114488v1 15584674 46 - 23502949 I e canFam3.chr1 56152868 33 + 122678785 I e cerAty1.NW_012002071v1 1367574 16 + 3144229 I e macNem1.NW_012011000v1 8337067 16 + 10161646 I e rheMac8.chr4 170304531 2 + 172585720 I e gorGor5.CYUI01015032v1 11449277 80 - 12463322 T a score=21395.000000 s hg38.chr6_KB021644v2_alt 76870 4 + 185823 TGTG s panTro5.chr6 1883355 4 - 175400573 TGTG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171766699 4 + 173848474 TGTG i panPan2.chr6 C 0 C 0 s nomLeu3.chr3 156277759 4 + 157873769 TGTG i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169050203 4 - 170955103 CCTG i macFas5.chr4 C 0 C 0 s chlSab2.chr13 96645938 4 + 98384682 TGTG i chlSab2.chr13 C 0 I 16 s manLeu1.NW_012106474v1 8190567 4 - 10857215 TGTG i manLeu1.NW_012106474v1 C 0 I 20 s colAng1.NW_012114488v1 15584720 4 - 23502949 TGTG i colAng1.NW_012114488v1 I 46 C 0 s calJac3.chr4 169854219 4 + 171630274 TGTG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1268033 4 - 2905041 TGTG i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1224937 4 - 2164891 TGTG i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1478897 4 - 1813869 TGTG i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10928459 3032 - 12073884 I e dasNov3.JH569188 534991 278 + 760995 I e canFam3.chr1 56152868 33 + 122678785 I e cerAty1.NW_012002071v1 1367574 16 + 3144229 I e macNem1.NW_012011000v1 8337067 16 + 10161646 I e rheMac8.chr4 170304531 2 + 172585720 I e gorGor5.CYUI01015032v1 11449277 80 - 12463322 T a score=29349.000000 s hg38.chr6_KB021644v2_alt 76874 10 + 185823 ACACCACGTG s panTro5.chr6 1883359 10 - 175400573 ACACCACGTG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171766703 10 + 173848474 ACACCACGTG i panPan2.chr6 C 0 C 0 s nomLeu3.chr3 156277763 10 + 157873769 ACACCACATG i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169050207 3 - 170955103 -------GGG i macFas5.chr4 C 0 C 0 s manLeu1.NW_012106474v1 8190591 10 - 10857215 ACACCACATG i manLeu1.NW_012106474v1 I 20 C 0 s colAng1.NW_012114488v1 15584724 10 - 23502949 ACACCACACG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169854223 10 + 171630274 ACTCCATGTG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1268037 10 - 2905041 ACCCCATGTG i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1224941 10 - 2164891 ACCCCATGTG i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1478901 10 - 1813869 ACCCCATGTG i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10928459 3032 - 12073884 I e dasNov3.JH569188 534991 278 + 760995 I e canFam3.chr1 56152868 33 + 122678785 I e chlSab2.chr13 96645942 16 + 98384682 I e cerAty1.NW_012002071v1 1367574 16 + 3144229 I e macNem1.NW_012011000v1 8337067 16 + 10161646 I e rheMac8.chr4 170304531 2 + 172585720 I e gorGor5.CYUI01015032v1 11449277 80 - 12463322 T a score=166814.000000 s hg38.chr6_KB021644v2_alt 76884 47 + 185823 GGGGCCGGCGTGTCCCTGCTGTGATGTGTGTGACACCATGT-------------------------------------------------------------G-GGGCC s panTro5.chr6 1883369 108 - 175400573 GGGGCCGGTGTGTCCCTGCTGTGATGTGTGTGACACCACGTGGGGGCCGGCGTGTCCCTGCTGTGATGTGTGTATCTCAGCTGTGATGTGCGACCCCACACGG-GGGCT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171766713 48 + 173848474 GGGGCCGGCGTGTCCCTGCTGTGATGTGTGTGACACCACGT------------------------------------------------------------GG-GGGCC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11449197 47 - 12463322 GGGGCTGGCACGTCCCTGCTGTGACATGTGTGACACCACGT-------------------------------------------------------------G-GGGCC i gorGor5.CYUI01015032v1 T 80 T 41 s nomLeu3.chr3 156277773 48 + 157873769 GGGGCTGGCATGTCCCTGCTGTGACGTGTGTGACACCACAT------------------------------------------------------------GG-GGGCT i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169050210 37 - 170955103 GAGCCCGACAT----------------GTGTGACACCACGT-------------------------------------------------------AACCCAG-GAACT i macFas5.chr4 C 0 C 0 s manLeu1.NW_012106474v1 8190601 47 - 10857215 GGGGCTGGCATGTCCCTGCTGTAACGGGTGTGACACCACAT-------------------------------------------------------------G-GGGCC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15584734 47 - 23502949 GGGGCCGGTGTGTCCCTGCTGTGACGAGTGTGACACCACGT-------------------------------------------------------------G-GGGCC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169854233 48 + 171630274 TGGGCCGGCGTGTCCCTGCTGTGAGGTGTGTGACCCCATGT-------------------------------------------------------------GTGGGCC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1268047 47 - 2905041 GGGGCCAGCGTGCCCCTGCTGTGACATGTGAGACACCACAT-------------------------------------------------------------G-GGCCA i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1224951 47 - 2164891 GGGGCTGGCGTGTCCCTGCTGTGACGTGTGTGACACCACGT-------------------------------------------------------------G-GGCCT i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1478911 48 - 1813869 GGGGCCGGCGTGTCCCTGCTGTGACGTGTGTGATCCCATGT-------------------------------------------------------------GGGGGCC i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10928459 3032 - 12073884 I e dasNov3.JH569188 534991 278 + 760995 I e canFam3.chr1 56152868 33 + 122678785 I e chlSab2.chr13 96645942 16 + 98384682 I e cerAty1.NW_012002071v1 1367574 16 + 3144229 I e macNem1.NW_012011000v1 8337067 16 + 10161646 I e rheMac8.chr4 170304531 2 + 172585720 I a score=17149.000000 s hg38.chr6_KB021644v2_alt 76931 4 + 185823 GGCA s panTro5.chr6 1883477 4 - 175400573 GGTG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171766761 4 + 173848474 GGCG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11449203 4 - 12463322 GGCA i gorGor5.CYUI01015032v1 T 41 C 0 s nomLeu3.chr3 156277821 4 + 157873769 GGCG i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169050247 4 - 170955103 GGCA i macFas5.chr4 C 0 I 2 s manLeu1.NW_012106474v1 8190648 4 - 10857215 AGTG i manLeu1.NW_012106474v1 C 0 T 81 s colAng1.NW_012114488v1 15584781 4 - 23502949 GGCG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169854281 4 + 171630274 GGCG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1268094 4 - 2905041 GGTA i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1224998 4 - 2164891 GGCG i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1478959 4 - 1813869 GGCG i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10928459 3032 - 12073884 I e dasNov3.JH569188 534991 278 + 760995 I e canFam3.chr1 56152868 33 + 122678785 I e chlSab2.chr13 96645942 16 + 98384682 I e cerAty1.NW_012002071v1 1367574 16 + 3144229 I e macNem1.NW_012011000v1 8337067 16 + 10161646 I e rheMac8.chr4 170304531 2 + 172585720 I a score=61214.000000 s hg38.chr6_KB021644v2_alt 76935 15 + 185823 CGTCCCTGCTG-----TGAC s panTro5.chr6 1883481 15 - 175400573 TGTCCCTGCTA-----TGAC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171766765 15 + 173848474 TGTCCCTGCTG-----TGAT i panPan2.chr6 C 0 I 124 s gorGor5.CYUI01015032v1 11449207 15 - 12463322 CGTCCCTGCTG-----TGAC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156277825 15 + 157873769 TGTCCCTGCCG-----TGAC i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169050253 20 - 170955103 TAGGCCTGGGGGAGCCCGAC i macFas5.chr4 I 2 C 0 s manLeu1.NW_012106474v1 8190571 15 - 10857215 TATCTCTGCTG-----TGAC i manLeu1.NW_012106474v1 T 81 C 0 s colAng1.NW_012114488v1 15584785 15 - 23502949 TGTCCCTGCTG-----TGAC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169854285 14 + 171630274 TGTCCCTGCTG-----TGA- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1268098 15 - 2905041 TGTCCCTGCTG-----TGAT i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1225002 15 - 2164891 TGTCCCTGCTG-----TGAC i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1478963 15 - 1813869 TGTCCCTGCTG-----TGAC i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10928459 3032 - 12073884 I e dasNov3.JH569188 534991 278 + 760995 I e canFam3.chr1 56152868 33 + 122678785 I e chlSab2.chr13 96645942 16 + 98384682 I e cerAty1.NW_012002071v1 1367574 16 + 3144229 I e macNem1.NW_012011000v1 8337067 16 + 10161646 I e rheMac8.chr4 170304531 2 + 172585720 I a score=1643.000000 s hg38.chr6_KB021644v2_alt 76950 1 + 185823 A s panTro5.chr6 1883496 1 - 175400573 G i panTro5.chr6 C 0 C 0 s panPan2.chr6 171766904 1 + 173848474 A i panPan2.chr6 I 124 C 0 s gorGor5.CYUI01015032v1 11449222 1 - 12463322 A i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156277840 1 + 157873769 G i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169050273 1 - 170955103 A i macFas5.chr4 C 0 C 0 s manLeu1.NW_012106474v1 8190586 1 - 10857215 A i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15584800 1 - 23502949 A i colAng1.NW_012114488v1 C 0 T 67 s saiBol1.JH378287 1268113 1 - 2905041 G i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1225017 1 - 2164891 A i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1478978 1 - 1813869 G i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10928459 3032 - 12073884 I e calJac3.chr4 169854299 0 + 171630274 C e dasNov3.JH569188 534991 278 + 760995 I e canFam3.chr1 56152868 33 + 122678785 I e chlSab2.chr13 96645942 16 + 98384682 I e cerAty1.NW_012002071v1 1367574 16 + 3144229 I e macNem1.NW_012011000v1 8337067 16 + 10161646 I e rheMac8.chr4 170304531 2 + 172585720 I a score=6750.000000 s hg38.chr6_KB021644v2_alt 76951 2 + 185823 TG s panTro5.chr6 1883497 2 - 175400573 TG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171766905 2 + 173848474 TG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11449223 2 - 12463322 TG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156277841 2 + 157873769 TG i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169050274 2 - 170955103 TG i macFas5.chr4 C 0 C 0 s calJac3.chr4 169854299 2 + 171630274 GG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1268114 2 - 2905041 TG i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1225018 2 - 2164891 TG i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1478979 2 - 1813869 TG i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10928459 3032 - 12073884 I e dasNov3.JH569188 534991 278 + 760995 I e colAng1.NW_012114488v1 15584801 67 - 23502949 T e canFam3.chr1 56152868 33 + 122678785 I e chlSab2.chr13 96645942 16 + 98384682 I e cerAty1.NW_012002071v1 1367574 16 + 3144229 I e manLeu1.NW_012106474v1 8190587 0 - 10857215 C e macNem1.NW_012011000v1 8337067 16 + 10161646 I e rheMac8.chr4 170304531 2 + 172585720 I a score=68541.000000 s hg38.chr6_KB021644v2_alt 76953 13 + 185823 TGTGACACCACGT s panTro5.chr6 1883499 13 - 175400573 TGTGACACCACGT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171766907 13 + 173848474 TGTGACACCATGT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11449225 13 - 12463322 TGTGACACCACGT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156277843 13 + 157873769 GGTGACACCACAT i nomLeu3.chr3 C 0 I 1 s macFas5.chr4 169050276 13 - 170955103 TGTGACACCACGT i macFas5.chr4 C 0 I 6 s chlSab2.chr13 96645958 13 + 98384682 TGTGACACCACGT i chlSab2.chr13 I 16 C 0 s manLeu1.NW_012106474v1 8190587 13 - 10857215 TGTGACACCACAT i manLeu1.NW_012106474v1 C 0 I 1 s calJac3.chr4 169854301 13 + 171630274 TGTGACTCCATGT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1268116 13 - 2905041 TGTGACACCACAT i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1225020 13 - 2164891 TGTGACCCCATGT i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1478981 13 - 1813869 TGTGACACCACGT i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10928459 3032 - 12073884 I e dasNov3.JH569188 534991 278 + 760995 I e colAng1.NW_012114488v1 15584801 67 - 23502949 T e canFam3.chr1 56152868 33 + 122678785 I e cerAty1.NW_012002071v1 1367574 16 + 3144229 I e macNem1.NW_012011000v1 8337067 16 + 10161646 I e rheMac8.chr4 170304531 2 + 172585720 I a score=249319.000000 s hg38.chr6_KB021644v2_alt 76966 42 + 185823 G-GGGCCG---------------------------GCGTGTCCCTGCTGTGACA-----------------------------------------------------------TGTGTGACACCACGTG s panTro5.chr6 1883512 101 - 175400573 G-GGGCCG---------------------------GCGTGTCCCTGCTGTGACATGTGTGTATCCCTGCCGTGACGTGTGACACCATGTGGGGCCGGCGTATCCCTGCCGTGATGTGTGACACCATGCG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171766920 40 + 173848474 G-GGGCCG---------------------------GCGTATCCCTGCCGTGA-------------------------------------------------------------TGTGTGACACCATGCG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11449238 42 - 12463322 G-GGGCCG---------------------------GCGTGTCCCTGCTGTGACA-----------------------------------------------------------TGTGTGACACCACCTG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156277857 42 + 157873769 G-GGGCTA---------------------------GCATGTCCCTGCTGTGACA-----------------------------------------------------------TGTGTGACACCACATG i nomLeu3.chr3 I 1 C 0 s macFas5.chr4 169050295 56 - 170955103 G-GAACCGGCAGATAAGCCTGGGGAAGCCCGACATGCATGTCCCTGCTGTGACA-----------------------------------------------------------CGT------------- i macFas5.chr4 I 6 C 0 s macNem1.NW_012011000v1 8337083 42 + 10161646 G-GGGCCG---------------------------ACGTGTCCCTCCTGTGACG-----------------------------------------------------------TGTGTGACACCACGTG i macNem1.NW_012011000v1 I 16 C 0 s cerAty1.NW_012002071v1 1367590 42 + 3144229 G-GGGCCG---------------------------ACGTGTCCCTCCTGTGACG-----------------------------------------------------------TGTGTGACACCACGTG i cerAty1.NW_012002071v1 I 16 C 0 s chlSab2.chr13 96645971 42 + 98384682 G-GGGCCC---------------------------GTGTGTCCCTGCTGTGATG-----------------------------------------------------------TGTGTGACACCACGTG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8190601 42 - 10857215 G-GGGCTG---------------------------GCATGTCCCTGCTGTAACG-----------------------------------------------------------GGTGTGACACCACATG i manLeu1.NW_012106474v1 I 1 C 0 s colAng1.NW_012114488v1 15584734 42 - 23502949 G-GGGCCG---------------------------GTGTGTCCCTGCTGTGACG-----------------------------------------------------------AGTGTGACACCACGTG i colAng1.NW_012114488v1 T 67 C 0 s calJac3.chr4 169854314 43 + 171630274 GTGGGCCG---------------------------GCGTGTCCCTGCTGTGAGG-----------------------------------------------------------TGTGTGACCCCATGTG i calJac3.chr4 C 0 I 1 s saiBol1.JH378287 1268129 42 - 2905041 G-GGCCTG---------------------------GCGTGTCCCTGCTGTGACA-----------------------------------------------------------TGTGTGACACCACGAG i saiBol1.JH378287 C 0 T 41 s cebCap1.NW_016107695v1 1225033 43 - 2164891 GGGGGCTG---------------------------GCGTGTCCCTGCTGTGACG-----------------------------------------------------------TGTGTGACACCACGTG i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1478994 42 - 1813869 G-GGCCTG---------------------------GTGTGTCCCTGCTGTGACA-----------------------------------------------------------TGTGTGACACCACGAG i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10928459 3032 - 12073884 I e dasNov3.JH569188 534991 278 + 760995 I e canFam3.chr1 56152868 33 + 122678785 I e rheMac8.chr4 170304531 2 + 172585720 I a score=181357.000000 s hg38.chr6_KB021644v2_alt 77008 25 + 185823 GGGCCGGCGTGTCCCTGCTGTGACA s panTro5.chr6 1883613 25 - 175400573 GGGCCGGCGTGTCCCTGCTGTGACG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171766960 25 + 173848474 GGGCCGGCGTGTCCCTGCTGTGACG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11449280 25 - 12463322 GGGCTGGCGTGTCCCTGCCGTGATG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156277899 25 + 157873769 AGACTAGTGTGTCTCTGCTGTGATG i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169050351 19 - 170955103 ------GTGTATCTCTGCCGTGACA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8337125 25 + 10161646 GGGCTGGTGTGTCCCTGCTGTGACA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1367632 25 + 3144229 GGGCTGGTGTGTCCCTGCTGTGACA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96646013 25 + 98384682 GGGCCCGTGTGTCCCTGCTGTGACA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8190643 25 - 10857215 GGGCCAGTGTGTCCCTGCTGTGACG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15584776 25 - 23502949 GGGCCGGCGTGTCCCTGCTGTGACA i colAng1.NW_012114488v1 C 0 T 81 s calJac3.chr4 169854358 25 + 171630274 GGACTGGCGTGTCCCTGCTGTGAGG i calJac3.chr4 I 1 C 0 s saiBol1.JH378287 1268130 25 - 2905041 GGCCTGGCGTGTCCCTGCTGTGACA i saiBol1.JH378287 T 41 C 0 s cebCap1.NW_016107695v1 1225076 25 - 2164891 GGCCTGGCGTATCCCTACTGTGACT i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1479036 25 - 1813869 GGCCTGGAATGCCCCTGCTGTGACG i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10928459 3032 - 12073884 I e dasNov3.JH569188 534991 278 + 760995 I e canFam3.chr1 56152868 33 + 122678785 I e rheMac8.chr4 170304531 2 + 172585720 I a score=14716.000000 s hg38.chr6_KB021644v2_alt 77033 2 + 185823 TG s panTro5.chr6 1883638 2 - 175400573 TG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171766985 2 + 173848474 TG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11449305 2 - 12463322 TG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156277924 2 + 157873769 TG i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169050370 2 - 170955103 TG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8337150 2 + 10161646 TG i macNem1.NW_012011000v1 C 0 T 83 s cerAty1.NW_012002071v1 1367657 2 + 3144229 TG i cerAty1.NW_012002071v1 C 0 T 83 s chlSab2.chr13 96646038 2 + 98384682 TG i chlSab2.chr13 C 0 T 82 s manLeu1.NW_012106474v1 8190668 2 - 10857215 GG i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169854383 2 + 171630274 TG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1268155 2 - 2905041 TG i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1225101 2 - 2164891 TG i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1479061 2 - 1813869 TG i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10928459 3032 - 12073884 I e dasNov3.JH569188 534991 278 + 760995 I e colAng1.NW_012114488v1 15584801 81 - 23502949 T e canFam3.chr1 56152868 33 + 122678785 I e rheMac8.chr4 170304531 2 + 172585720 I a score=262605.000000 s hg38.chr6_KB021644v2_alt 77035 37 + 185823 TGT------------------GACACCACGTGGGGGCCGGCGTGTCCCTGCTGTG s panTro5.chr6 1883640 55 - 175400573 TGTATCTCTGCCGTGATGTGCGACCCCACACGGGGGCTGGTGTGTCCCTGCTATG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171766987 55 + 173848474 TGTATCTCTGCCGTGATGTGCGACCCCACACGGGGGCTGGTGTGTCCCTGCTATG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11449307 34 - 12463322 T--------------------GACACCACGT-GGGGCCGGCGTGTTCCTGCTGTG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156277926 37 + 157873769 TGT------------------AACACCGCATGGGGGCTGGCGTGTCCCTGCTGTG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170304533 37 + 172585720 TGT------------------GACACCACACAGGGGCCGACGTGTCCCTCCTGTG i rheMac8.chr4 I 2 C 0 s macFas5.chr4 169050372 35 - 170955103 --T------------------GACACCACACAGGGGCCGACGTGTCCCTCCTGTG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8337069 37 + 10161646 TGT------------------GACACCACACAGGGGCCGACGTGTCCCTCCTGTG i macNem1.NW_012011000v1 T 83 C 0 s cerAty1.NW_012002071v1 1367576 37 + 3144229 TGT------------------GACACCACACAGGGGCCGACGTGTCCCTCCTGTG i cerAty1.NW_012002071v1 T 83 C 0 s chlSab2.chr13 96645958 36 + 98384682 TGT------------------GACACCACGT-GGGGCCCGTGTGTCCCTGCTGTG i chlSab2.chr13 T 82 C 0 s manLeu1.NW_012106474v1 8190670 36 - 10857215 TGT------------------GACACCACAT-GGGGCCGGTGTGTCCCTGCTGTG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15584720 37 - 23502949 TGT------------------GACACCACACGGGGGCCGGTGTGTCCCTGCTGTG i colAng1.NW_012114488v1 T 81 C 0 s calJac3.chr4 169854385 37 + 171630274 TGT------------------GACCCCATGTGGGGGCTGGCGTGTCCCTGCTGTG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1268157 37 - 2905041 TGT------------------GACACCACGAGGGTGCTGGTATGTCCTGGCCATG i saiBol1.JH378287 C 0 T 83 s cebCap1.NW_016107695v1 1225103 37 - 2164891 TGT------------------GACCCCATGTGGGGGCTGGCGTGTCCCTGCTGTG i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1479063 36 - 1813869 TGT------------------GACATCATGTGGGC-CTGGTGTGTCCCTGCTGTG i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10928459 3032 - 12073884 I e dasNov3.JH569188 534991 278 + 760995 I e canFam3.chr1 56152868 33 + 122678785 I a score=358646.000000 s hg38.chr6_KB021644v2_alt 77072 39 + 185823 ATGTGTGTGACACCACGTG-GGG-CCGGCGTGTCCCTGCTG s panTro5.chr6 1883695 40 - 175400573 ACGTGTGTGACACCACGCG-GGGGCCGGCATGTCCCTGCTG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171767042 40 + 173848474 ACGTGTGTGACACCACGCG-GGGGCCGGCATGTCCCTGCTG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11449341 39 - 12463322 ATGTGTGTGACACCATGTG-GGG-CCGGCGTGTCCCTGCTG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156277963 39 + 157873769 ACATGTGTGACACCACATG-AGA-CTAGTGTGTCCCTGCTG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170304570 39 + 172585720 ACGTGTGTGACACCACGTG-GGG-CTGGTGTGTCCCTGCTG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169050407 39 - 170955103 ACGTGTGTGACACCACGTG-GGG-CTGGTGTGTCCCTGCTG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8337106 39 + 10161646 ACGTGTGTGACACCACGTG-GGG-CTGGTGTGTCCCTGCTG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1367613 39 + 3144229 ACGTGTGTGACACCACGTG-GGG-CTGGTGTGTCCCTGCTG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96645994 39 + 98384682 ATGTGTGTGACACCACGTG-GGG-CCCGTGTGTCCCTGCTG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8190706 39 - 10857215 ACGGGTGTGACACCACGTG-GGG-TCAGTGTGTCCCTGCTG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15584757 39 - 23502949 ACGAGTGTGACACCACGTG-GGG-CCGGCGTGTCCCTGCTG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169854422 40 + 171630274 ACATGTGTGACCCCATGTGTGGG-CCAGCGTGTCCCTGCTG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1268111 39 - 2905041 ATGTGTGTGACACCACATG-GGC-CTGGCGTGTCCCTGCTG i saiBol1.JH378287 T 83 C 0 s cebCap1.NW_016107695v1 1225140 39 - 2164891 ACGTGTGTGACACCACGTG-GGC-CTGGCGTATCCCTACTG i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1479099 39 - 1813869 ATGTGTGTGACACCACGTG-GGC-CTGGTGTGTCCCTGCTG i aotNan1.NW_018494782v1 C 0 T 93 e otoGar3.GL873575 10928459 3032 - 12073884 I e dasNov3.JH569188 534991 278 + 760995 I e canFam3.chr1 56152868 33 + 122678785 I a score=25946.000000 s hg38.chr6_KB021644v2_alt 77111 11 + 185823 TGACAT---------------------------------------------------------------GTGTG s panTro5.chr6 1883735 11 - 175400573 TGACAT---------------------------------------------------------------GTGTG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171767082 11 + 173848474 TGACAT---------------------------------------------------------------GTGTG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11449380 11 - 12463322 TGACAT---------------------------------------------------------------GTGTG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156278002 11 + 157873769 TGACAT---------------------------------------------------------------GTATG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170304609 11 + 172585720 TGACAT---------------------------------------------------------------GTGTG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169050446 11 - 170955103 TGACAT---------------------------------------------------------------GTGTG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8337145 11 + 10161646 TGACAT---------------------------------------------------------------GTGTG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1367652 11 + 3144229 TGACAT---------------------------------------------------------------GTGTG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96646033 11 + 98384682 TGACAT---------------------------------------------------------------GTGTG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8190745 11 - 10857215 TGACAT---------------------------------------------------------------GTGTG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15584796 11 - 23502949 TGACAC---------------------------------------------------------------TTGTG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169854462 69 + 171630274 TGAGGTGTGACTCCATGTGTGGGCCAACGTGTCCCTGCTGTGAGGTGTGACTCCATGTGTGGGCCGGCG----- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1268150 6 - 2905041 TGACAT-------------------------------------------------------------------- i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1225179 6 - 2164891 TGACTT-------------------------------------------------------------------- i cebCap1.NW_016107695v1 C 0 C 0 e otoGar3.GL873575 10928459 3032 - 12073884 I e aotNan1.NW_018494782v1 1479138 93 - 1813869 T e dasNov3.JH569188 534991 278 + 760995 I e canFam3.chr1 56152868 33 + 122678785 I a score=169422.000000 s hg38.chr6_KB021644v2_alt 77122 25 + 185823 TATCCCTGCCGTGAT--GTGTGACACC s panTro5.chr6 1883746 25 - 175400573 TATCCCTGCCGTGAT--GTGTGACACC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171767093 25 + 173848474 TATCCCTGCCGTGAT--GTGTGACACC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11449391 25 - 12463322 TATCCCTGCCGTGAT--GTGTGACACC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156278013 25 + 157873769 TATCTCTGCCGTGAT--GTGTGACATC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170304620 25 + 172585720 TATCTCTGCCATGAC--GTGTGACACC i rheMac8.chr4 C 0 I 23 s macFas5.chr4 169050457 23 - 170955103 TATCTCTGCCATGAC--GTGTGACA-- i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8337156 25 + 10161646 TATCTCTGCCATGAC--GTGTGACACC i macNem1.NW_012011000v1 C 0 I 23 s cerAty1.NW_012002071v1 1367663 25 + 3144229 TATCTCTGCCATGAC--GTGTGACACC i cerAty1.NW_012002071v1 C 0 I 23 s chlSab2.chr13 96646044 25 + 98384682 TATCTCTGCTGTGAC--GTGTGACACC i chlSab2.chr13 C 0 I 2 s manLeu1.NW_012106474v1 8190756 25 - 10857215 TATCTCTGCCATGAC--CTGTGACACC i manLeu1.NW_012106474v1 C 0 I 2 s colAng1.NW_012114488v1 15584807 25 - 23502949 TATCTCTGCCGTGAC--GTGTGACACC i colAng1.NW_012114488v1 C 0 I 2 s calJac3.chr4 169854531 25 + 171630274 TGTCCCTGCTGTGA--GGTGTGACTCC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1268156 10 - 2905041 -----------------GTGTGACACC i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1225185 10 - 2164891 -----------------GTGTGACACC i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1479045 27 - 1813869 TGCCCCTGCTGTGACGTGTGTGACATC i aotNan1.NW_018494782v1 T 93 C 0 e otoGar3.GL873575 10928459 3032 - 12073884 I e dasNov3.JH569188 534991 278 + 760995 I e canFam3.chr1 56152868 33 + 122678785 I a score=-8684.000000 s hg38.chr6_KB021644v2_alt 77147 7 + 185823 ATGT-------------------------------------------GAG s panTro5.chr6 1883771 7 - 175400573 ATGT-------------------------------------------GAG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171767118 7 + 173848474 ATGT-------------------------------------------GAG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11449416 7 - 12463322 ATGT-------------------------------------------GGG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156278038 50 + 157873769 ACGTGGGGACCAGCGTGTCCCTGCTGTGACGTGTGTGATACTACGTGGGG i nomLeu3.chr3 C 0 C 0 s chlSab2.chr13 96646071 6 + 98384682 --------------------------------------------ACGGGG i chlSab2.chr13 I 2 C 0 s manLeu1.NW_012106474v1 8190783 6 - 10857215 --------------------------------------------ACGGGG i manLeu1.NW_012106474v1 I 2 C 0 s colAng1.NW_012114488v1 15584834 6 - 23502949 --------------------------------------------ACGGGG i colAng1.NW_012114488v1 I 2 C 0 s calJac3.chr4 169854556 7 + 171630274 ATGT-------------------------------------------GGG i calJac3.chr4 C 0 I 1 s saiBol1.JH378287 1268166 7 - 2905041 ACGA-------------------------------------------GGG i saiBol1.JH378287 C 0 T 180 s cebCap1.NW_016107695v1 1225195 7 - 2164891 ACAC-------------------------------------------AGG i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1479072 7 - 1813869 ATGT-------------------------------------------GGG i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10928459 3032 - 12073884 I e dasNov3.JH569188 534991 278 + 760995 I e canFam3.chr1 56152868 33 + 122678785 I e cerAty1.NW_012002071v1 1367688 23 + 3144229 I e macNem1.NW_012011000v1 8337181 23 + 10161646 I e rheMac8.chr4 170304645 23 + 172585720 I e macFas5.chr4 169050480 0 - 170955103 C a score=93837.000000 s hg38.chr6_KB021644v2_alt 77154 28 + 185823 GCCGGCGTGTCCCTGCTGTGAC--GTGTGT s panTro5.chr6 1883778 28 - 175400573 GCCGGTGTGTCCCTGCTGTGAC--GTGTGT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171767125 28 + 173848474 GCCGGTGTGTCCCTGCTGTGAC--GTGTGT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11449423 28 - 12463322 GCTGGTGTGTCCCTGCTGTGAT--GTATGT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156278088 30 + 157873769 GCTGGTGCGTCCCTGCTGTGACATGTGTGT i nomLeu3.chr3 C 0 C 0 s chlSab2.chr13 96646077 27 + 98384682 GCCAGCATG-CCCTGATGTGAT--GTGAGC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8190789 27 - 10857215 GCCAGCATG-CCCTGATGTGAT--GTGTGG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15584840 27 - 23502949 GCCAGCATG-CCCTGATGTGAT--GTGTGT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169854564 28 + 171630274 ACCGGCATGTCCCTGCTGTGAC--GTGTGT i calJac3.chr4 I 1 I 21 s cebCap1.NW_016107695v1 1225202 28 - 2164891 CCTGGCATGTCCCTGCTGTGAC--ATGTGT i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1479079 28 - 1813869 CCTGGTGTGTCCCTGCTGTGAT--GTGTGT i aotNan1.NW_018494782v1 C 0 I 31 e otoGar3.GL873575 10928459 3032 - 12073884 I e saiBol1.JH378287 1268173 180 - 2905041 T e dasNov3.JH569188 534991 278 + 760995 I e canFam3.chr1 56152868 33 + 122678785 I e cerAty1.NW_012002071v1 1367688 23 + 3144229 I e macNem1.NW_012011000v1 8337181 23 + 10161646 I e rheMac8.chr4 170304645 23 + 172585720 I e macFas5.chr4 169050480 0 - 170955103 C a score=18342.000000 s hg38.chr6_KB021644v2_alt 77182 17 + 185823 ATCTCAGCCATGGTGTG s panTro5.chr6 1883806 17 - 175400573 ATCTCAGCCATGGTGTG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171767153 17 + 173848474 ATCTCAGCCATGGTGTG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11449451 17 - 12463322 ATCTCTGCCGTGATGTG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156278118 17 + 157873769 ATCTCTGCCGTGATGTG i nomLeu3.chr3 C 0 C 0 s calJac3.chr4 169854613 17 + 171630274 GTCCCTGCTGTGATGTG i calJac3.chr4 I 21 I 42 e otoGar3.GL873575 10928459 3032 - 12073884 I e saiBol1.JH378287 1268173 180 - 2905041 T e aotNan1.NW_018494782v1 1479107 31 - 1813869 I e cebCap1.NW_016107695v1 1225230 0 - 2164891 C e dasNov3.JH569188 534991 278 + 760995 I e colAng1.NW_012114488v1 15584867 0 - 23502949 C e canFam3.chr1 56152868 33 + 122678785 I e chlSab2.chr13 96646104 0 + 98384682 C e cerAty1.NW_012002071v1 1367688 23 + 3144229 I e manLeu1.NW_012106474v1 8190816 0 - 10857215 C e macNem1.NW_012011000v1 8337181 23 + 10161646 I e rheMac8.chr4 170304645 23 + 172585720 I e macFas5.chr4 169050480 0 - 170955103 C a score=474.000000 s hg38.chr6_KB021644v2_alt 77199 1 + 185823 C s panTro5.chr6 1883823 1 - 175400573 T i panTro5.chr6 C 0 T 163 s panPan2.chr6 171767170 1 + 173848474 T i panPan2.chr6 C 0 T 163 s gorGor5.CYUI01015032v1 11449468 1 - 12463322 C i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156278135 1 + 157873769 T i nomLeu3.chr3 C 0 C 0 s calJac3.chr4 169854672 1 + 171630274 T i calJac3.chr4 I 42 C 0 s saiBol1.JH378287 1267993 1 - 2905041 C i saiBol1.JH378287 T 180 C 0 e otoGar3.GL873575 10928459 3032 - 12073884 I e aotNan1.NW_018494782v1 1479107 31 - 1813869 I e cebCap1.NW_016107695v1 1225230 0 - 2164891 C e dasNov3.JH569188 534991 278 + 760995 I e colAng1.NW_012114488v1 15584867 0 - 23502949 C e canFam3.chr1 56152868 33 + 122678785 I e chlSab2.chr13 96646104 0 + 98384682 C e cerAty1.NW_012002071v1 1367688 23 + 3144229 I e manLeu1.NW_012106474v1 8190816 0 - 10857215 C e macNem1.NW_012011000v1 8337181 23 + 10161646 I e rheMac8.chr4 170304645 23 + 172585720 I e macFas5.chr4 169050480 0 - 170955103 C a score=36138.000000 s hg38.chr6_KB021644v2_alt 77200 10 + 185823 GACCCCACAC s panTro5.chr6 1883661 10 - 175400573 GACCCCACAC i panTro5.chr6 T 163 C 0 s panPan2.chr6 171767008 10 + 173848474 GACCCCACAC i panPan2.chr6 T 163 C 0 s gorGor5.CYUI01015032v1 11449469 10 - 12463322 GACCCCACAC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156278136 10 + 157873769 GACACCACAT i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169050480 6 - 170955103 --CCTCAC-- i macFas5.chr4 C 0 I 19 s chlSab2.chr13 96646104 10 + 98384682 GACCCCACAC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8190816 10 - 10857215 GACCCCACAC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15584867 10 - 23502949 GACCCCACAC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169854673 10 + 171630274 GACTCCATGT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1267994 10 - 2905041 AGCACCACGC i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1225230 10 - 2164891 GACCCCATGT i cebCap1.NW_016107695v1 C 0 C 0 e otoGar3.GL873575 10928459 3032 - 12073884 I e aotNan1.NW_018494782v1 1479107 31 - 1813869 I e dasNov3.JH569188 534991 278 + 760995 I e canFam3.chr1 56152868 33 + 122678785 I e cerAty1.NW_012002071v1 1367688 23 + 3144229 I e macNem1.NW_012011000v1 8337181 23 + 10161646 I e rheMac8.chr4 170304645 23 + 172585720 I a score=191716.000000 s hg38.chr6_KB021644v2_alt 77210 22 + 185823 GGGGGCTGGTGTGTCACTGCTA s panTro5.chr6 1883671 22 - 175400573 GGGGGCTGGTGTGTCCCTGCTA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171767018 22 + 173848474 GGGGGCTGGTGTGTCCCTGCTA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11449479 22 - 12463322 GGGGGCTGGTGTGTCCCTGCTA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156278146 22 + 157873769 GGGGGCTGGCGTGTCCCTGCCG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170304668 22 + 172585720 GGGGGCTGGTGTGTCCCTGCTA i rheMac8.chr4 I 23 C 0 s macFas5.chr4 169050505 22 - 170955103 GGGGGCTGGTGTGTCCCTGCTA i macFas5.chr4 I 19 C 0 s macNem1.NW_012011000v1 8337204 22 + 10161646 GGGGGCTGGTGTGTCCCTGCTA i macNem1.NW_012011000v1 I 23 C 0 s cerAty1.NW_012002071v1 1367711 22 + 3144229 GGGGTCTGGTGTGTCCCTGCCG i cerAty1.NW_012002071v1 I 23 C 0 s chlSab2.chr13 96646114 22 + 98384682 GGGGGCTGGTGTGTCCCTGCTA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8190826 22 - 10857215 GGGGGCTGGTGTGTCCCTGCTA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15584877 22 - 23502949 GGGGGCTGGTGCGTCCCCGCTA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169854683 22 + 171630274 GTGGGCTGGCGTGTCCCTGCTC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1268004 22 - 2905041 AGGGGCCGGTGTGTCCCTGCTG i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1225240 22 - 2164891 GGGGGCCGGCGTGTCCCTGCTG i cebCap1.NW_016107695v1 C 0 C 0 e otoGar3.GL873575 10928459 3032 - 12073884 I e aotNan1.NW_018494782v1 1479107 31 - 1813869 I e dasNov3.JH569188 534991 278 + 760995 I e canFam3.chr1 56152868 33 + 122678785 I a score=94683.000000 s hg38.chr6_KB021644v2_alt 77232 10 + 185823 TGACGTGTGT s panTro5.chr6 1883693 10 - 175400573 TGACGTGTGT i panTro5.chr6 C 0 I 121 s panPan2.chr6 171767040 10 + 173848474 TGACGTGTGT i panPan2.chr6 C 0 I 121 s gorGor5.CYUI01015032v1 11449501 9 - 12463322 TGACGTGTG- i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156278168 10 + 157873769 TGATGTGCGT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170304690 10 + 172585720 TGACGTGTGT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169050527 10 - 170955103 TGACGTGTGT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8337226 10 + 10161646 TGACGTGTGT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1367733 10 + 3144229 TGACGTGTGT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96646136 10 + 98384682 TGACGTGTGT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8190848 10 - 10857215 TGATGTGTGT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15584899 10 - 23502949 TGACATGTGT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169854705 10 + 171630274 TGACGTGTGT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1268026 10 - 2905041 TGACATGTGT i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1225262 10 - 2164891 TGACATGTGT i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1479138 10 - 1813869 TGATGTGTGT i aotNan1.NW_018494782v1 I 31 C 0 e otoGar3.GL873575 10928459 3032 - 12073884 I e dasNov3.JH569188 534991 278 + 760995 I e canFam3.chr1 56152868 33 + 122678785 I a score=75194.000000 s hg38.chr6_KB021644v2_alt 77242 9 + 185823 GACACCACG s panTro5.chr6 1883824 9 - 175400573 GACACCACG i panTro5.chr6 I 121 C 0 s panPan2.chr6 171767171 9 + 173848474 GACACCACG i panPan2.chr6 I 121 C 0 s gorGor5.CYUI01015032v1 11449510 8 - 12463322 -ACACCACG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156278178 9 + 157873769 GACCCCACA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170304700 9 + 172585720 GACACTACG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169050537 9 - 170955103 GACACTACG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8337236 9 + 10161646 GACACTACG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1367743 9 + 3144229 GACACTACA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96646146 9 + 98384682 GACACTACG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8190858 9 - 10857215 GACACTACA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15584909 9 - 23502949 GACACTATG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169854715 9 + 171630274 GATACCATG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1268036 9 - 2905041 GACCCCATG i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1225272 9 - 2164891 GACACCACG i cebCap1.NW_016107695v1 C 0 I 14 s aotNan1.NW_018494782v1 1479148 9 - 1813869 GACACCATG i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10928459 3032 - 12073884 I e dasNov3.JH569188 534991 278 + 760995 I e canFam3.chr1 56152868 33 + 122678785 I a score=298387.000000 s hg38.chr6_KB021644v2_alt 77251 44 + 185823 CGGGGGCCA-----GT------------------------------------------GTGTCCCTGCTGTGACCTGTGCGACACCATGCA s panTro5.chr6 1883833 44 - 175400573 CGGGGGCCA-----GT------------------------------------------GTGTCCCTGCTGTGACCTGTGTGACACCATGCA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171767180 44 + 173848474 CGGGGGCCA-----GT------------------------------------------GTGTCCCTGCTGTGACCTGTGTGACACCATGCA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11449518 44 - 12463322 TGGGGGCCA-----GT------------------------------------------GTCTCCCTGCTGTGACCTGTGCGACACCATGCA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156278187 37 + 157873769 CGGGGGCTG-----GT------------------------------------------GTGTCCCTGCTGTGACGTGTGTGACA------- i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170304709 49 + 172585720 CGGGGGCCACGGCAGT------------------------------------------GTGTCCCTGCCGTGACCTGTGTGACACCATGCA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169050546 49 - 170955103 CGGGGGCCACGGCAGT------------------------------------------GTGTCCCTGCCGTGACCTGTGTGACACCATGCA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8337245 49 + 10161646 CGGGGGCCACGGCAGT------------------------------------------GTGTCCCTGCCGTGACCTGTGTGACACCATGCA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1367752 49 + 3144229 CGGGGGCCATGGCGAT------------------------------------------GTGTCCCTGCCGTGACCTGTGTGACACCATGCA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96646155 49 + 98384682 TGGGGGCCATGGCAGT------------------------------------------GTGTCCCTGCCGTGACCTGTGTGACACCAGGCA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8190867 49 - 10857215 CGGGGGCCATGGTGAT------------------------------------------GTGTCCCTGCCGTGACCTGTGTGACACCATGCA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15584918 91 - 23502949 CAGGGGCCACGGCAGTGTGTCCCTGCCGTGACCCGTGTGACACCATGCAGGTGCTGGCGTGTCCCTGCCGTGACCTGTGTGACACCATGCA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169854724 44 + 171630274 TGGGGCCTG-----GC------------------------------------------ATGTCCCTGCTGTGACATGTGTGATACCATGTG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1268045 44 - 2905041 TGGGGGCCA-----GC------------------------------------------GTGCCCCTGCTGTGACATGTGAGACACCACATG i saiBol1.JH378287 C 0 I 82 s aotNan1.NW_018494782v1 1479157 43 - 1813869 -TGGGCCTG-----GT------------------------------------------GTGTCCCTGCTGTGACACGTGTGACACTACGTG i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10928459 3032 - 12073884 I e cebCap1.NW_016107695v1 1225281 14 - 2164891 I e dasNov3.JH569188 534991 278 + 760995 I e canFam3.chr1 56152868 33 + 122678785 I a score=76954.000000 s hg38.chr6_KB021644v2_alt 77295 10 + 185823 GGTGCTGGCA s panTro5.chr6 1883877 10 - 175400573 GGTGCTGGCA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171767224 10 + 173848474 GGTGCTGGCA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11449562 10 - 12463322 GGTGCTGGCA i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170304758 10 + 172585720 GGTGCTGGTG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169050595 10 - 170955103 GGTGCTGGTG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8337294 10 + 10161646 GGTGCTGGTG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1367801 10 + 3144229 GGTGCTGGCG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96646204 10 + 98384682 GGTGCTGGCG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8190916 10 - 10857215 GGTGCTGGCG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15585009 10 - 23502949 GGTGCTGGCG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169854768 10 + 171630274 GGTGCTGGTG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1268171 10 - 2905041 GGTGCTGGTA i saiBol1.JH378287 I 82 C 0 s aotNan1.NW_018494782v1 1479200 10 - 1813869 GGTGCTGGTG i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10928459 3032 - 12073884 I e cebCap1.NW_016107695v1 1225281 14 - 2164891 I e dasNov3.JH569188 534991 278 + 760995 I e canFam3.chr1 56152868 33 + 122678785 I e nomLeu3.chr3 156278224 0 + 157873769 C a score=349168.000000 s hg38.chr6_KB021644v2_alt 77305 34 + 185823 TGTCCCAGCCATGTGTCAGGCCACTGCTGTCTGT s panTro5.chr6 1883887 34 - 175400573 TGTCCCAGCCATGTGTCAGGCCACTGCTGTCTGT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171767234 34 + 173848474 TGTCCCAGCCATGTGTCAGGCCACTGCTGTCTGT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11449572 34 - 12463322 TGTCCCAGCCATGTGTCAGGCCACTGCTGTCTGT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156278224 26 + 157873769 --------CCATGTGTCAGTTCACTGCTGTCTGT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170304768 34 + 172585720 TGTCCCAGCCATGTGTCAGGCCACTGCTGTCTGT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169050605 34 - 170955103 TGTCCCAGCCATGTGTCAGGCCACTGCTGTCCGT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8337304 34 + 10161646 TGTCCCAGCCATGTGTCAGGCCACTGCTGTCTGT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1367811 34 + 3144229 TGTCCCAGCCATGTGTCAGGCCACTGCTGTCTGT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96646214 34 + 98384682 TGTCCCAGCCATGTGTCAGGCCACTGCTGTCTGT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8190926 34 - 10857215 TGTCCCAGCCATGTGTCAGGCCACTGCTGTCTGT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15585019 34 - 23502949 TGTCCCAGCCATGTGTCAGGCCACTGCCGTCTGT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169854778 34 + 171630274 TGTCCTGGCCATGTATCAGGCCACTGCTGTCTGT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1268181 34 - 2905041 TGTCCTGGCCATGTGAGAGGCCACTGCTGTCTGT i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1225295 34 - 2164891 TGTCCTGGCCATGTGTCAGGCCACTGCTGTCTGT i cebCap1.NW_016107695v1 I 14 C 0 s aotNan1.NW_018494782v1 1479210 34 - 1813869 TGTCCTGGCCATGTGTCAGGCCACTGCTGTCTGT i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10928459 3032 - 12073884 I e dasNov3.JH569188 534991 278 + 760995 I e canFam3.chr1 56152868 33 + 122678785 I a score=6609747.000000 s hg38.chr6_KB021644v2_alt 77339 713 + 185823 CAGTATCACCCCAGAAGCTCAGCATGAAGACAGCATGGCTGCCTGAATTTATAGATGAGAAAATGAGGCTCAGCGTGGTGATCACCTTATGAAATCATGGGATACGATTTAAATGAGGGTTGGAGGAGGCATTTGAACAGTGTCACTGAGA-ACGTGGCATGACGCTGTGTCTGACCAGCAAATGCGAAGGTT-----------------------------TTATGTGGCTTGTGGACCCGTTTCAGGCTCTCCTGAGAGACGGTACCTGGGAGCAGTGGCCTGAAGCACCTCCTGGGGCCTCTAAGTCCCGTATCGAGTGGCCGGCGCCATGTCCCATCACTCAGGGTCTCCTTTAAGTGccgaacttcactgagtct---gcagcactgtggattcaaagacagtctgttattttatgttccactaagaaagaaaatacactgccaagtacactaaagcagaatgcttctttctgatttggaagttttatt-ttatatttatttaaagggttctttcaatgtattttgtggaatatctacatgtatatctacatacatctatctatttatacatagacttg------------------------------------------------------tattatatattattgttttgaaatcacaggaaggacagtgaaagcgaacagtcttggtgaattcgggtttctataacaagctaccattaa----ccgggtggtttat--aaaaatcagaaattcatttcc--------catagttctaggggctggaagtccaagcccaggacagca s panTro5.chr6 1883921 713 - 175400573 CAGTATCACCCCAGAAGCTCAGCATGAAGACAGCATGGCTGCCTGAATTTATAGATGAGAAAATGAGGCTCAGCGTGGTGATCACCTTATGAAATCATGGGATACGATTTAAATGAGGGTTGGAGGAGGCATTTGAACAGTGCCACTGAGA-ACGTGGCATGACGCTGTGTCTGACCAGCAAATGCGAAGGTT-----------------------------TTATGTGGCTTGTGGACCCGTTTCAGGCTCTCCTGAGAGACGGTACCTGGGAGCAGTGGCCTGAAGCACCTCCTGGGGCCTCTAAGTCCTGTATCGAGTGGCCGGCGCCATGTCCCATCACTCAGGGTCTCCTTTAAGTGccgaacttcactgagtct---gcagcactgtggattcaaagacagtctgttattttatgttccactaagaaagaaaatacactgccaagtacactaaagcagaatgcttctttctgatttggaagttttatt-ttatatttatttaaagggttctttcaatgtattttatggaatatctacatgtatatctgcatacatctatctatttatacatagacttg------------------------------------------------------tattatatattattgttttgaaatcacaggaaggacagtgaaagcgaacagtcttggtgaattcgggtttctataacaagctaccataga----ccgggtggtttag--aaaaatcagaaattcatttcc--------catagttctaggggctggaagtccaagcccaggacagca i panTro5.chr6 C 0 C 0 s panPan2.chr6 171767268 713 + 173848474 CAGTATCACCCCAGAAGCTCAGCATGAAGACAGCATGGCTGCCTGAATTTATAGATGAGAAAATGAGGCTCAGCGTGGTGATCACCTTATGAAATCATGGGATACGATTTAAATGAGGGTTGGAGGAGGCATTTGAACAGTGCCACTGAGA-ACATGGCATGACGCTGTGTCTGACCAGCAAATGCGAAGGTT-----------------------------TTATGTGGCTTGTGGACCCGTTTCAGGCTCTCCTGAGAGACGGTACCTGGGAGCAGTGGCCTGAAGCACCTCCTGGGGCCTCTAAGTCCCGTATCGAGTGGCCGGCGCCATGTCCCATCACTCAGGGTCTCCTTTAAGTGccgaacttcactgagtct---gcagcactgtggattcaaagacagtctgttattttatgttccactaagaaagaaaatacactgccaagtacactaaagcagaatgcttctttctgatttggaagttttatt-ttatatttatttaaagggttctttcaatgtattttatggaatatctacatgtatatctacatacatctatctatttatacatagacttg------------------------------------------------------tattatatattattgttttgaaatcacaggaaggacagtgaaagcgaacagtcttggtgaattcgggtttctataacaagctaccataga----ccgggtggtttag--aaaaatcagaaattcatttcc--------catagttctaggggctggaagtccaagcccaggacagca i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11449606 713 - 12463322 CAGTATCACCCCAGAAGCTCAGCATGAAGACAGCATGGCTGCCTGAATTTATAGATGAGAAAATGAGGCTCAGTGTCGTGATCACCTTATGAAATCATGGGATACGATTTAAATGAGGGTTGGAGGAGGCATTTGAATAGTGTCACTGAGA-ACGTGGCATGACGCTGTGTCTGACCAGCAAATGCGAAGGTT-----------------------------TTATGTGGCCTGTGGACCCGTTTCAGGCTCTCCTGAGAGACGGTACCTGGGAGCAGTGGCCTGAAGCACCTCCTGGGGCCTCTAAGTCCCGTATCGAGTGGCCGGCGCCACGTCCCATCACTCAGGGTCTCCTTTAAGTGccgaacttcactgagtct---gcagcactgtggattcaaagacagtctgttattttacgttccactaagaaagaaaatacactgccaagtacactaaagcagaatgctgctttctgatttggaagttttatt-ttatatttatttaaagggttctttcaatgtattttgtggaatatctacatgtatatctacatacatctatctatttatacatagacttg------------------------------------------------------tattatatattattgttctgagatcacaggaaggacagtgaaagcgaacagtcttggtgaattcggatttctataacaagctaccataga----ccgggtggtttat--aaaaatcagaaattcatttcc--------catagttctgggggctggaagtccaagcccagggcagca i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156278250 709 + 157873769 CAGTATCACCCCAGAAGCTCAGCATGAAGACAGCATGGCTGCCTGAATTTATAGATGCGAGAATGAGGCTCAGCGTGGTGATCGCCTTATGAAATCATGGGATACGACTTAAATGAGGGTTGGAGGAGGCATTTGAATGGTGTCACTGAGA-ATGTGGCATGACGCTGTGTCTGACCAGCAAATGCAAAGGTT-----------------------------TTATGTGGCCTGTGGACCTGTTTCAGGCTCTCCTGAGAGACGGTACCTGGGAGCAGGGGCCTGAAGCACCTCCTGGGGCCTCTAAGTCCTGTATCGAGTGGCCGGCGCCATGTCCCATTGCTTGGGGTCTCCTTTAAGTGccgaacttcactgagtct---gcagcactgtggatacgaagacagtctgttattttatgatccactaagaaagaaaatacactgccaagtacattaaagcagagtgcgtctttctgacttggaagttttatt-ttatacttatttaaagggttctctcaatgtattttgtggaatatctacatgtatatctacatac----atctgtttatacatagacttg------------------------------------------------------tattatatattattgttttgaaatcacaggaaggacagtgaaagcgaacagtcttagtgaatttgggtttctataacaagctaccataga----ctgggcggtttat--aaaaatcagaaattcatttcc--------catagttctgggggctggaagtccaagcccagggcagca i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170304802 712 + 172585720 CAGTATCACCCCAGAAGCTCAGCATGAAGACAGCACGGCTGCATGTATTTATAGATGAGAAAATGAGGTTCAGTGTGGTGATCACCTTATGAAATCATGGGGTATGATTTAAATGAGGGTTGGAGGAGGCATTTGAATGGTGTCACTGAGA-ATGTGGCATGATGCTGTGTCTGATTAGCAAATGCGAAGGTT-----------------------------TTCTATGGCCTGTGGGCCCGTTTCAGGCTCTCCTGAGAGACGGTACCTGGGAGCAGGGTCCTTAAGCACCTCCTGGGGCCTCTAAGCCCTGTATCGAGTGGCTGGAGCCATGTCCCATCGCTCAGGGTCTACTTTAAGTGCCAAacttcactgagtct---gcagcactgtggattcaaagacagtccgttattttatgttccactaagaaagaaaatacagtgccaagtacactaaagcagaatgcttctttctgacttgaatgttttatt-ttatatttatttaaagggttctttcagtgtattttgtggaatatctacaagtatatctacatacatctatctattcatacatagacttg------------------------------------------------------tattgtatattattgttttgaaatcacaggaagaacagtgaaagctaagcgtcttagtgagttcaggtttctataacaagataccataga----ccagatggtttat--aaaaa-cagaaattcatttcc--------catagttctgggggctggaagtccaagcccagggcagct i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169050639 712 - 170955103 CAGTATCACCCCAGAAGCTCAGCATGAAGACAGCACGGCTGCATGTATTTATAGATGAGAAAATGAGGTTCAGTGTGGTGATCACCTTATGAAATCATGGGGTATGATTTAAATGAGGGTTGGAGGAGGCATTTGAATGGTGTCACTGAGA-ATGTGGCATGATGCTGTGTCTGATTAGCAAATGCGAAGGTT-----------------------------TTCTATGGCCTGTGGGCCCTTTTCAGGCTCTCCTGAGAGACGGTACCTGGGAGCAGGGGCCTTAAGCACCTCCTGGGGCCTCTAAGCCCTGTATCGAGTGGCTGGAGCCATGTCCCATCGCTCAGGGTCTACTTTAAGTGccgaacttcactgagtca---gcagcactgtggattcaaagacagtctgttattttatgttccactaagaaagaaaatacagtgccaagtacactaaagcagaatgcttctttctgacttgaatgttttatt-ttatatttatttaaagggttctttcagTGTATTTTGTGGAATATCTACAAGTATATCTACATACATCTATCtattcatacatagacttg------------------------------------------------------tattgtatattattgttttgaaatcacaggaagaacagtgaaagctaagcgtcttagtgagttcaggtttctataacaagataccataga----ccagatggtttat--aaaaa-cagaaattcatttcc--------catagttctgggggctggaagtccaagcccagggcagct i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8337338 712 + 10161646 CAGTATCACCCCAGAAGCTCAGCATGAAGACAGCACGGCTGCATGTATTTATAGATGAGAAAATGAGGTTCAGTGTGGTGATCACCTTATGAAATCATGGGGTATGATTTAAATGAGGGTTGGAGGAGACATTTGAATGGTGTCACTGAGA-ATGTGGCATGATGCTGTGTCTGATTAGCAAATGCGAAGGTT-----------------------------TTCTATGGCCTGTGGGCCCGTTTCAGGCTCTCCTGAGAGACGGTACCTGGGAGCAGGGGCCTTAAGCACCTCCTGGGGCCTCTAAGCCCTGTATCGAGTGGCTGGAGCCATGTCCCATCGCTCAGGGTCTACTTTAAGTGccgaacttcactgagtca---gcagcactgtggattcaaagacagtctgttattttatgttccactaagaaagaaaatacagtgccaagtacactaaagcagaatgcttctttctgacttgaatgttttatt-ttatatttatttaaagggttctttcagtgtattttgtggaatatctacaagtgtatctacatacatctatctattcatacatagacttg------------------------------------------------------tattgtatattattgttttgaaatcacaggaagaacagtgaaagctaagcgtcttagtgagttcaggtttctataacaagataccataga----ccagatggtttat--aaaaa-cagaaattcatttcc--------catagttctgggggctggaagtccaagcccagggcagct i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1367845 712 + 3144229 CAGTATCACCCCAGAAGCTCAGCATGAAGGCAGCACGGCTGCATGTATTTATAGATGAGAAAATGAGGTTCAGTGTGGTGATCACCTTATGAAATCATGGGGTATGATTTAAATGAGGGTTGGAGGAGGCATTTGAATGGTGTCACTGAGA-ATGTGGCATGATGCTGTGTCTGATCAGCAAATGCGAAGGTT-----------------------------TTCTATGGCCTGTGGGCCTGTTTCAGGCTCTCCTGAGAGATGGTGCCTGGGAGTAGGGGCCTTAAGCACCTCCTGGGGCCTCTAAGCCCCATATCAAGTGGCTGGAACCATGTCCCATCGCTCAGGGTCTACTTTAAGTGccgaacttcactgagtct---gcagcactgtggattcaaagacagtccgttattttatgttccactaagaaagaaaatacagtgccaagtacactaaagcagaatgcttctttctgacttggatgttttatt-ttatatttatttaaagggttctttcagtgtattttgtggaatatctacaagtatatctacatacatctatctattcatacatagacttg------------------------------------------------------tattatatattattgttttgaaatcacaggaagaacagtgaaagctaagcgtcttagtgagttcgggtttctataacaagctaccacaga----ccaggtggtttat--aaaaa-cagaaattcatttcc--------catagctctgggggctggaagtccaagcccagggcagcc i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96646248 707 + 98384682 CAGTATCACCCCAGTAGCTCAGCATGAAGACAGCATGGCTGCATGTATTTATGGATGAGAAGATGAGGTTCGGTGTGGTGATCACCTCATGAAATCATGGGGTATGATTTAAATGAGGGTTGGGGGAGGCATTTAAATGGTGTCACTGAGA-ATGTGGCATGACGATGTGTCTGATCAGCAAATGCAAAGGTT-----------------------------TTATACTGCCTGTGGGCCCGTTTCAGGCTCTCCTGAGAGACGGTACCTAGCAGCAGGGGCCTTAAGCACCTCCTGGGGCCTCTAAGCCCCATATCGAGTGGCTGGAGCCATGTCCCATCGCTCAGGGTCTACTTTAAGTGCCAAacttcactgagtct---gcagcactgtggattcaaagacagtccgttatgttatgttccactaagaaagaaaatacagtaccaagtacactaaagcagaatgcttctttctgacttggatgttttatt-ttatttttatttaaaggattctttcaatgtattttgtggaatatctacaagtatatctacatacatctatctatttatacatagacttg-----------------------------------------------------------tatattattgttttgaaatcacaggaagaacagtgaaagctaagagtcttagtgagttcgggtttctataacaagctaccgtaga----gcaggtggtttat--aaaaa-cagaaattcatttcc--------catagttctgggggctggaagtccaagcccagggcagcc i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8190960 710 - 10857215 CAGTATCACCCCAGAAGCTCAGCATGAAGGCAGCACGGCTGCA-GTATTTATAGATGAGAAAATGAGGTTCAGTGTGGTGATCACCTTATGAAAT-ATGGGGTATGATTTAAATGAGGGTTGGAGGAGGCATTTGAATGGTGTCACTGAGG-ATGTGGCATGACGCTGTGTCTGATCAGCAAATGCGAAGGTT-----------------------------TTCTATGGCCTGTGGGCCTGTTTCAGGCTCTCCTGAGAGACAGTACCTGGGAGCAGGGGCCTTAAGCACCTCCTGGGGCCTCTAAGCCCCATATCAAGTGGCTGGAACCATGTCCCATCGCTCAGGGTCTACTTTAAGTGccgaacttcactgagtct---gcagcactgtggattcaaagacagtccgttattttatgttccactaagaaagaaaacacagtgccaagtacactaaagcagaatgcttctttctgacttggatgttttatt-ttatgtttatttaaagggttctttcagtgtattttgtggaatatctacaagtatatctacatacatctatctattcatacatagacttg------------------------------------------------------tattatatattattgttttgaaatcacaggaagaacagtgaaagctaagcgtcttagtgagttcgggtttctataacaagctaccacaga----ccaggtggtttat--aaaaa-cagaaattcatttcc--------catagctctgggggctggaagtccaagcccagggcagcc i manLeu1.NW_012106474v1 C 0 I 65 s colAng1.NW_012114488v1 15585053 769 - 23502949 CAGTATCACCCCAGAAGCTCAGCATGAAGACAGCATGGCTGCAAGTGTTTATAGATGAGAAAATGAGGTTCAGTGTGGTGATCACCTTATGAAATCATGGGGTATGATTTAAATGAGGGTTGGAGGAGGCATTTGAATGGTGTCACTGAGA-ATGTGGCATGACGCTGTGTCTGATCAGCAAATGCGAAGGTG-----------------------------TTATATGGCCTGTGGGTCTGTTTCAGGCTCTCCTGAGAGACAGTACCCGGGAGTAGGAGCCTTAAGCACCTCCTGGGGCCTCTAAGCCCTGTATCGAGTGGCTGAAACCATGTCCCATTGCTCAGGGTCTACTTTAAGTGCCAAacttcactgagtctgcggcagcactgtggattcaaagacagtccattattttatgttccactaagagagaaaatacagtaccaagtacactaaagcagaatgcttctttctgacttggatgttttatt-ttatacttatttaaagggttctttcaATGTATTTTGTGGAATATCTACAAGTATATCTACATACATCTATCTATGTATACATAGACTTGTATTGTATATTATTGTTTTGAAATCACGGGAAGAACAGTGAAAGCTtagacttgtattgtatattattgttttgaaatcacaggaagaacagtgaaagctaagagtcttagtgagttcgggtttctataacaagctaccataga----ccaggtggtttat--aaaaa-cagaaattcatttcc--------catagttctgggggctggaagtccaagcccaacgcagcc i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169854812 726 + 171630274 CAGCATCACCCCAGAAGCTCAGCATGAAGA---CATGGCTACACTAATTTACAGATGAGAAAATAAGGCTCAGCATGCTGAGCACCTGATGAAATCAGGGGATAAGGTTTAAATGAGGGTTGGAGGAGGCATTTGAATGGGGTCACTGAGA-ATGTGGCGTGGTGCTGTATCTCA-CAGCAAATGGGAAGGTTTTATGTGGGCTGTGGGCCCGTTTCAAGTCTTATGTGGGCTGTGGGCCCGTTTCAGGCTCTCCTGAGAGTCAGTACCCGGGATCAG-GGGCTGAAGCACCTCCTGGGGCCTCTGAGCCCCGAGTCGAGTGGCTGGCACAGTGTTCCATCGCTCAGGGGCTCCTTTAAGTCCCAAACTCAAGTgagtct---gcggcactattgattc--agacagtc-----tgttatgtgccagtaagaaagaaaatacactgccaggtgcgctgagacagtg--attccttgtgacttggaagttttatt-ttatacttatttaaggggttctttcagtgtattttgtggagtatctgtttgtctatctacatacatctaagtctttatac--agaatta------------------------------------------------------tattacatattattgttttgaaaccacaaaaaggacagtggaagctaagagttttagtgaattcgggtttctataaaaaactactataga----cagggaggtttat--aaaaaacagaaattcttttct--------cattgttctgggggctggaagtccgagcccagggcggca i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1268215 704 - 2905041 CAGCATCACCCCGGAAGCTCAGCGTGAAGA---CATGGCTACATGAATTTACAGATGAGAAAATAAGGCTCAGCGTGCTGATCACCTGACGAAATCATGGGATAGGATTTAAATGAGGGTTGGAGGAGGCATTTGAATGGTGTCACTGAGA-ATGTGGCACGATGCTGTGTCTCACCAGCAAATGGGAAGGTT-----------------------------TTATGTGGCCTGTGGGCCCGTTTCAGGCTCTCCTGAGAGTCAGTACCTGGGATCAG-GGCCTGAAGCAGCTCCTGGGGCCTCTGAGCCCTGAATCGAGTGGCTGGCACAGTGTTCTATAGCTCAGGGGCTCCTTTAAGTCCCAAACTCAAGTGAGTCT---GCAGCACGACTGATTC--agacagtccgtgatgttatgtgccagtaagaaagaaaatgcacggccaggtacactgagacagagt-gctccttgtgacttggaagttttagt-ttatacttatttaaggggttctttCGATGTATGTTGTGGAGTATCTATATGTCTATTTATATACATCTATCTCTTTATACATAGAGTTA------------------------------------------------------TATTATATATTATTGTTTTGAAACCACAAAAAGGACAGTGAAAGCT--GAgtcttagtgaattcgagtttcaataacaaactaccataga----cagggtggtttac--aaaaaacagaaattcttttct--------cattgttctgggggctggaagtccaagcccagggcagca i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1225329 704 - 2164891 CAGCATCACCCCAGAAGCTCAGCATGAAGA---CATGGCTACACAAATTTACAGATGAGAAAAGAAGGCTCAGCATGCTGATCACCTGATGAAATCATGGGATAGGATTTAAATGAGGGTTGGAGGAGGCATTTGAATGGTGTCACTGAGA-ATATGGCGTGACGCTGTGTCTCACCAGCAAATGGGAAGGTT-----------------------------TTATGTGGCCTGTGGGCCCGTTTCAGGCTCTCCTGAGAATCAGTACCTGGGATCAG-CGCCTGAAGCACCTCCTGGGGCCTCTGAGCCCCAAATCGAGTGGCT-GCACAGTGTTCTATCGCTCAGGGGCTCCTCTAAGTCCCAAACTCAAGTAAGTCT---GCAGcactatcgattc--agacagtccgttatgttatatgccagtaagaaagaaaatacactgccaggtacactgaaacagagtgcttccttgtgacttggaagttttatt-ttacacttatttaaggggttctttcaatgtatttgtctatatgtctatatgtctatctacatacatccatctctttgtacatagagtta------------------------------------------------------tattatatagtatcgttttgaaaccacaaaaaggacagtgaaagct--gagtcttagtgaattcgggttttgataacaaactgccataga----caaggtggtttat--aaaaaacagaaattcttttct--------catcgttctgggggctggaagtccaagcccagggcagca i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1479244 708 - 1813869 CAGCATCACCCCAGAAGCTCAGCGTGAAGA---CATGGCTACACAAATTTACAGATGAGAAAATAAGGCTCGGCATGCTGATCACCTGATGAAATCATGGGATAGGATTTAAATGGGGGTCGGAGGAGGCATTTGAATGGTGTCACTGAGA-ATGTGGCGTGACGCTGTGTCTCACCAGCAAATGGGAAGGTT-----------------------------TTCTGTGGCCTGTGGGCCCGTTTCAGGCTCTCCTGAGAGTCAGTACCTGGGATCGG-GGCCTGAAGCACTTCCTGGGGCCTCTGGGCCCCGAATCGAGTGGCTGGCACAGTGTTCTATCGCTCAGGGCCCCATTTAAGTCCCAAACTCAAGTGCGTCT---GCAGCActatcaattc--agacggtccgttatgttatgtgccagtaagaaagaaaatacactgccaggtgcgctgaggcagggtgcttccttgtgactcggaagttttatt-ttatacttatttaaggggttctttcaatgtattttgtggagtatctgtatgtctatctacatacatctctctctttatacgtagagtta------------------------------------------------------tattatatattattgttttgaaaccacaaaaaggacagtgaaagctaagagtcttagtgaattcaggtttctataacaaactaccataga----cagggtggtttataaaaaaaacagaaattcttttct--------ccttgttctgggggctggac-cacgagcccagggcagca i aotNan1.NW_018494782v1 C 0 C 0 s canFam3.chr1 56152901 617 + 122678785 CAGCCCCAGCCCAGACGCTTGGGGTGAGGACAGCATCACCGCGGGAATTCATCCCTGAGAAAATGAGGCTGGCACAGCTACAAACCTCCTAAGTCCACGGGAGTTTATAGACAGGAGGG-------------------GGTCTCATCGAGGCATGTGGCTCAGTGGCGTGTCTGCCCAGCAAACGGGGAGCTT-----------------------------TCACCGGGATGGTGGGCTCCTCTGGGGCTGTCCTG------------------CAGAGG----------CTCCCGG-----------------TC--GTGACGGGGTCTGTG-CCCATCATCCTGTTCCTGCTTC-GGTGCTT--CCCCATTGACTCC---AGGGCACCGTCAA-GCAAAGATGTGCCATCATTT--------ACAGAGATGGACACCCCA--------TAAACTAACAAAACAT-ATGTTTTATGATTTTGAATGTTTATTATTATACTTATC--AAGTGCTCT-TCAAtgtatttattgaaatatctc----tgtacctacataaacccacatatttagacatagattta------------------------------------------------------tat--attattattattttgaaaagcataaaaggacagtgtaagacatgtaagttggtgaa-----ggtcttataaaacatattcacagggcacctgggtggttcag--tggtt-gagcgtttgcctttcggctcaggcctgatcctggggtcctgggat-caagtccaag------ i canFam3.chr1 I 33 C 0 e otoGar3.GL873575 10928459 3032 - 12073884 I e dasNov3.JH569188 534991 278 + 760995 I a score=42596.000000 s hg38.chr6_KB021644v2_alt 78052 8 + 185823 gaattatg s panTro5.chr6 1884634 8 - 175400573 gcattgtg i panTro5.chr6 C 0 C 0 s panPan2.chr6 171767981 8 + 173848474 gcattgtg i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11450319 8 - 12463322 gcatcgtg i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156278959 8 + 157873769 gcgtggtg i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170305514 8 + 172585720 gcgtggtg i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169051351 8 - 170955103 gcgtggtg i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8338050 8 + 10161646 gcgtggtg i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1368557 8 + 3144229 gcggggtg i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96646955 8 + 98384682 gcctggtg i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15585822 8 - 23502949 gcgtagtg i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169855538 8 + 171630274 gcctggtg i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1268919 8 - 2905041 gcgtggtt i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1226033 8 - 2164891 gcgtggtt i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1479952 8 - 1813869 gcttggtc i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10928459 3032 - 12073884 I e dasNov3.JH569188 534991 278 + 760995 I e canFam3.chr1 56153518 0 + 122678785 C e manLeu1.NW_012106474v1 8191670 65 - 10857215 I a score=504496.000000 s hg38.chr6_KB021644v2_alt 78060 59 + 185823 gggttcttgtgaggcccctctgcgaggttgcaaatggcgccttctcactgtgtctttat s panTro5.chr6 1884642 59 - 175400573 gggttcttgtgaggcccctctgtgaggttgcaaacggcgccttctcactgtgtctttac i panTro5.chr6 C 0 C 0 s panPan2.chr6 171767989 59 + 173848474 gggttcttgtgaggcccctctgtgaggttgcaaacggcgccttctcactgtgtctttac i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11450327 59 - 12463322 gggttcttgtgaggcccctctgtgaggttgcaaacggcgccttctcactgtgtctttac i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156278967 59 + 157873769 gggttctggtgaggcccctctgcgaggttgcagacggcgccttctcactgtgtcttcac i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170305522 59 + 172585720 gggttctggtgaggcccctctgcaaggttgcagacggtggcttctcaccgtgtcttcac i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169051359 59 - 170955103 gggttctggtgaggcccctctgcaaggttgcagacggtggcttctcactgtgtcttcac i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8338058 59 + 10161646 gggttctggtgaggcccctctgcaaggttgcagacggtggcttctcactgtgtcttcac i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1368565 59 + 3144229 gggttctggtgaggcccctctgcgaggttgcagacggtggcttctcactgtgtcttcac i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96646963 59 + 98384682 gggttctggtgaagcccctctgtgaggttgcagacggccgcttctgactgtgtcttcac i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8191735 59 - 10857215 gggttctggtgaggcccctctgcgaggctgcagacggcggcttctcactgtgtcttcac i manLeu1.NW_012106474v1 I 65 C 0 s colAng1.NW_012114488v1 15585830 59 - 23502949 gggttctggtggggcccctctgcgaggttgcagacggcggcttctcactgtgtcttcac i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169855546 57 + 171630274 gggctccggtgagg-ccctctgtgagcctgcgaatggcgcc-tctcactgtgtcttcat i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1268927 57 - 2905041 ggggtccggtgagg-ccctctgtgagcttgtggagggcgcc-tctcactgtgtcttcat i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1226041 57 - 2164891 ggggtccagtgagg-ccctctgtgagcttgtggatggtgcc-tctcactttgtcttcat i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1479960 58 - 1813869 agggtctggtgagg-ccctctgtgagcttgtggatggcgccttctcactgtgtcttcat i aotNan1.NW_018494782v1 C 0 C 0 s canFam3.chr1 56153518 43 + 122678785 --------gtcagg-ctccctgcatgg-------agcctgcttctccctctgcctgtgt i canFam3.chr1 C 0 I 50 e otoGar3.GL873575 10928459 3032 - 12073884 I e dasNov3.JH569188 534991 278 + 760995 I a score=1322310.000000 s hg38.chr6_KB021644v2_alt 78119 151 + 185823 gtggtggaggggagaagatctctgaggtcccttttgtaagggcgctaaccccattcaccagggcttcactctcatgaccccatcacctccccaagaccccacctcctcgcccattgatat-ggggtgaggattttagtattgggatttgggg s panTro5.chr6 1884701 151 - 175400573 atggtggaggggagaagatctctgaggtcccttttgtaagggcgctaaccccattcaccagggcttcactctcatgaccccatcacctccccaggaccccacctcctcgcccattgatat-ggggtgaggattttagtgttgggatttgggg i panTro5.chr6 C 0 C 0 s panPan2.chr6 171768048 151 + 173848474 atggtggaggggagaagatctctgaggtcccttttgtaagggcgctaaccccattcaccagggcttcactctcatgaccccatcacctccccaggaccccacctcctcgcccattgatat-ggggtgaggattttagtgttgggatttgggg i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11450386 151 - 12463322 gtggtggaggggagaagagctctgaggtcccttttgtaagggcgctaaccccgttcaccagggcttcactctcatgaccccatcacctccccaagaccccacctcctctcccattgatat-ggggtgaggatttcagtattgggatttgggg i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156279026 151 + 157873769 gtggtggaggggagaagagctctgaggtcccttttgaaagggcgctaaccctgttcaccagggcttcactctcatgaccccatcacctccccaagaccccacctccttgcccattgatat-ggggtgaggatttcagtattgggatttgggg i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170305581 149 + 172585720 gtggtggaggggagaaga-ctcggaggttccttttataaggacacaaaccct-ctcaccagggcttcactctcatgaccctgtcacttccccaagatcccacctcctctcccattgatat-ggcatgaggatttcagtattgggatttgcgg i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169051418 149 - 170955103 gtggtggaggggagaaaa-ctcggaggttccttttataaggacacaaaccct-ctcaccagggcttcactctcatgaccctgtcacttccccaagatcccacctcctctcccattgatat-ggcatgaggatttcagtattaggatttgcgg i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8338117 149 + 10161646 gtggtggaggggagaaaa-ctcggaggttccttttataaggacacaaaccct-cttaccagggcttcactctcatgaccctgtcacttccccaagatcccacctcctctcccattgatat-ggcgtgaggatttcagtattgggatttgcgg i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1368624 150 + 3144229 gtggtggaggggagaagagctcggaggttccttttataaggacactgaccct-ctcaccagggcttcactctcatgaccccgtcacttccccaagatcccacctcctctcccgttgatat-ggcgtgaggatttcagtattgggatttgggg i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96647022 150 + 98384682 gtggtggaggggagaagagctcggaggttccttttataaggacactaaccct-ttcaccagtgcttcactctcatgaccccgtcacttccccaagatcccacctcctctcccattgagat-ggtgtgaggatttcagtattgggatttgcgg i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8191794 149 - 10857215 gtggtgca-gggagaagagctcggaggttccttttataaggacactgaccct-ctcaccagcgcttcgctctcatgaccccgtcacttccccaagatcccacctcctctcccgttgacat-ggcgtgaggatttcagtattgggatttgtgg i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15585889 150 - 23502949 gtggtggaggggagaagatctctgaggttccttttgtaaggacactaacccg-ttcaccagggcttcactctcatgaccccgtcccttccccaagatcccacctcctctcccgttgatat-ggcctgaggatttcagtattgggatttgggg i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169855603 152 + 171630274 gtggtggaaagggagagagctcagaggccccttttataagggcactaaccctgttcaccagggcctcaccctcatgacctcgtcacctgcccaagatcctacctcctgtctcattgatatgggggtgaggatgtcagtattgggatttgggg i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1268984 152 - 2905041 gtggtagaaagggagagagctcagaggccccttttataaggccactaaccctgttcaccagggcctcacccacatgacctcatcacctccccaagatcccacctcctatcccactgtcacgggggtgaggatgtcagtattgggatttgggg i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1226098 152 - 2164891 gtggtgcaaagggagagagctcagaggccccttttataagggcactaaccctgttcaccagggccccaccctcatgacctcatcacctccccaagaccccacctccaatcccattgacatgggggtgaggatgtcagtactgggatttgggg i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1480018 152 - 1813869 gtggtggagagggacagagctcagaggtccctttgataagggcactaaccctgttcacccgggcctcaccctcatgacctcatcacctccccaagaccccacctcctgtcccattgacacgggggtgaggatgtgggtattgggatttgggg i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10928459 3032 - 12073884 I e dasNov3.JH569188 534991 278 + 760995 I e canFam3.chr1 56153561 50 + 122678785 I a score=313393.000000 s hg38.chr6_KB021644v2_alt 78270 38 + 185823 gaacacaaacatgcagaccataccgttgagtgaatcca s panTro5.chr6 1884852 38 - 175400573 gaacacaaacatgcagaccataccgttgagtgaatcca i panTro5.chr6 C 0 C 0 s panPan2.chr6 171768199 38 + 173848474 gaacacaaacatgcagaccataccgttgagtgaatcca i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11450537 38 - 12463322 gaacacaaacatgcagaccataccgttgagtgaatcca i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156279177 31 + 157873769 gaacacaaacatgcagaccacac-------tgagtcca i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170305730 38 + 172585720 gaacacaaacatgctgaccataccattaagtgaatcca i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169051567 38 - 170955103 gaacacaaacatgctgaccataccattaagtgaatcca i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8338266 38 + 10161646 gaacacaaacatgctgaccataccattaagtgaatcca i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1368774 38 + 3144229 gaacacaaacatgcagaccataccattaagtgaatcca i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96647172 38 + 98384682 gaacacaaacatgcagaccataccattaagtgaatcca i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8191943 38 - 10857215 gaacacaaacatgccgaccataccattaagtgaatcca i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15586039 38 - 23502949 gaacacaaacatgccgaccataccattaagtgaatcca i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169855755 38 + 171630274 gaacacacacatgcagtccacacagctgagtgaattga i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1269136 38 - 2905041 gaacacacacatgcagtccaCCCTATTGagtgaattga i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1226250 38 - 2164891 gaacacacacatgcagtccacacaactgagtgaactga i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1480170 38 - 1813869 gaacacagacatgcagtccacacaattgagtgaattga i aotNan1.NW_018494782v1 C 0 C 0 s canFam3.chr1 56153611 11 + 122678785 aaaaaTAAACA--------------------------- i canFam3.chr1 I 50 C 0 e otoGar3.GL873575 10928459 3032 - 12073884 I e dasNov3.JH569188 534991 278 + 760995 I a score=348638.000000 s hg38.chr6_KB021644v2_alt 78308 39 + 185823 ttagggtattacgaacacacatttacattcagagtacaa s panTro5.chr6 1884890 39 - 175400573 ttagggtattacgaacacacatttacattcagagtacaa i panTro5.chr6 C 0 C 0 s panPan2.chr6 171768237 39 + 173848474 ttagggtattacgaacacacatttacattcagagtacaa i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11450575 39 - 12463322 ttagggtattacgaacacacatttacattcagagtacaa i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156279208 39 + 157873769 ttagggtattaggaaaacacgtttacattcggagtACAA i nomLeu3.chr3 C 0 I 238 s rheMac8.chr4 170305768 39 + 172585720 ttagggtattacgaaaacatatttccattcagagtacaa i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169051605 39 - 170955103 ttagggtattacgaaaacatatttccattcagagtacaa i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8338304 39 + 10161646 ttagggtattacgaaaacatatttccattcagagtacaa i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1368812 39 + 3144229 ttagggtattacgaaaacatatttccattcagagtacaa i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96647210 39 + 98384682 ttagggtattacgaaaacacatttacattcagagtacaa i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8191981 39 - 10857215 ttagggtattacgaaaacacatttccattcagagtacaa i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15586077 39 - 23502949 ttagggtattacgaaaacatatttccattcagagtacaa i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169855793 35 + 171630274 ttaggatatcaggggaacatattca----cagagcgcaa i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1269174 37 - 2905041 ttagggtattggggtaatattcaca--ttcagagtgcaa i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1226288 39 - 2164891 ttagggtattaggggaacatattcacattcagagtgcaa i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1480208 39 - 1813869 ttagggtattagggaagcatgttcacattcagggtgcaa i aotNan1.NW_018494782v1 C 0 C 0 s canFam3.chr1 56153622 24 + 122678785 ---------------AGCACATTCACATTCAGGTCCCAG i canFam3.chr1 C 0 I 19 s dasNov3.JH569188 535269 39 + 760995 ttaagggattgctaggacttatgaacactgagagttcaa i dasNov3.JH569188 I 278 C 0 e otoGar3.GL873575 10928459 3032 - 12073884 I a score=2089279.000000 s hg38.chr6_KB021644v2_alt 78347 236 + 185823 ----------------------tagtgtcatgaatgcccatggctttccaggtaaccatggctatgggccctgaaag-agcgtttaagatccagtgtttctcagcggaggagccgccactgcagctccaacatcctccccgccaccgacgccggctctgtgagtttcaatgcttcggatttctcgtgctagaagc------ag-----gcatccctttcagcaatagcgaggaatctgatgccttcctggtttgggccttggaagctttg s panTro5.chr6 1884929 236 - 175400573 ----------------------tggtgtcatgaatgcccatggctttccaggtaaccatggctatgggccctgaaag-agcgtttaagatccagtgtttctcagcggaggagccgccactgcagctccaacatcctccccgccaccgacgccggctctgtgagtttccatgcttcggatttctcgtgctagaagc------ag-----gcatccctttcagcaatagcgaggaatccgatgccttcctggtttgggccttggaagctttg i panTro5.chr6 C 0 C 0 s panPan2.chr6 171768276 236 + 173848474 ----------------------tggtgtcatgaatgcccatggctttccaggtaaccatggctatgggccctgaaag-agcgtttaagatccagtgtttctcagcggaggagccgccactgcagctccaacatcctccccgccaccgacgccggctctgtgagtttccatgcttcggatttctcgtgctagaagc------ag-----gcatccctttcagcaatagcgaggaatccgatgccttcctggtttgggccttggaagctttg i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11450614 236 - 12463322 ----------------------tggtgtcatgaatgcccatggctttccaggtaaccatggctatgggccctgaaag-agtgtttaagatccagtgtgtctcagaggaggagccgccactgcagctccaacatcctccccaccaccgacactggctctgtgagttttgatgcttcagatttctcaagctagaagc------ag-----gcatccctttcagcaatagcgaggaatccgatgccttcctggtttgggccttggaagctttg i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156279485 234 + 157873769 ----------------------TGGTgtcgtggatgcccatggctttccaggtaaccgcggctgtgggccctgaaag-agcgtttgagat-cagtgt-tctcagagcaggagctgccactgccgctccaacatcctccccgccaccgacgccggctctgtgagtttcgctgcttcggatttctcaagctagaagc------ag-----gcatccctttcagcaatagcgaggaatccgatgccttcctggtttggggcttggaagctttg i nomLeu3.chr3 I 238 C 0 s rheMac8.chr4 170305807 236 + 172585720 ----------------------tggtgtcatgaatgcccctggctttccaggtaaccgtggctacgggccgtgaaaa-agtgtttgagatccagtgtttctcagaggaggagccgccactgcggctccactgtcctcccagccaccaatgcaggctctgtaagtttcgatgcttcggatttcttaagctagaagc------ag-----gcatccatttcagcaatagcaagcaatccgatgtcttcctactttgggccttggaagctttg i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169051644 236 - 170955103 ----------------------tggtgtcatgaatgcccctggctttccaggtaaccgtggctacgggccgtgaaaa-agtgtttgagatccagtgtttctcagaggaggagccgccactgcggctccactgtcctcccagccaccaatgcaggctctgtaagtttcgatgcttcggatttcttaagctagaagc------ag-----gcatccatttcagcaatagcaagcaatccgatgtcttcctactttgggccttggaagctttg i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8338343 236 + 10161646 ----------------------tggtgtcatgaatgcccctggctttccaggtaaccgtggctacgggccgtgaaaa-agtgtttgagatccagtgtttctcagagggggagccgccactgcggctccactgtcctcccagccaccaatgcaggctctgtaagtttcgatgcttcggatttcttaagctagaagc------ag-----gcatccatttcagcaatagcaagcaatccgatgtcttcctactttgggccttggaagctttg i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1368851 236 + 3144229 ----------------------tggtgtcatgaatgcccctggctttccaggtaactgtggctacgggccgtgaaag-agtgtttgagatccagtgtttctcagaggaggagccgccactgcggctccaccgtcctcccagccaccgacgcaggctctgtaagtttcgatgcttcggatttcttaagctagaagc------ag-----gcatccatttcggcaatagcaagcaatccgatgccttcctagtttgggccttggaagctttg i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96647249 236 + 98384682 ----------------------tggtgtcatgaatgcccctggctttccaggtaaccgtggctacgggccgtgaaag-agtgtttgagatccagggtttctcagaggaggagccaccactggggctccaacatcctcccagccaccaacgcaggctctgtaagtttcgatgcttcggatttcttaagctagaagc------ag-----gcatccatttcagcaatagcaaggaatccaatcctttcctagtttgggccttggaagctttg i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8192020 241 - 10857215 ----------------------tggtgtcatgaatgcccctggctttccaggtaaccgtggctacgggccgtgaaag-agtgtttgagatccagtgtttctcagaggaggagctgccactgcggctccaccgtcctcccagccaccgacgcaggctctgtaagtttcaatgcttcggatttcttaagctagaaga------agcaggcacatccatttcagcaatagcaagcaatccgatgccttcctagtttgggccttggaagctttg i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15586116 235 - 23502949 ----------------------tggtgtcatgaatg-ccctggcttcccaggtaaccatggctacaggccctgaaag-agtgtttgagatccagtgtttctcagaggaggaaccgccactgcggctccaacatccccccagccaccgacgcaggctctgtaagtttcgatgctttggatttcttaagctagaagc------ag-----gcatccatttcagcaatagcaaggaacccaatgccttcctagtttgggccttggaagctttg i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169855828 235 + 171630274 ----------------------tggtgtcgtgaaggcccaaggctttccacataaccatggccacggagcctggaag-agcgttggagatctgctgtttgtcagc-gagtagctgccactgcagctccaacgtcctcccagacactgccacctgctctgcaagttcccatgctttggattcctcaggctagaagc------ag-----gcgtccatttcagccacagcgaggaatccgacgccttgctagtttgggcctcggaagctttg i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1269211 231 - 2905041 ----------------------tggtgtcgtgaaggcccgtggctttccacgtaaccgtgaccactgagcctggaag-agcgtttgagatctgctgtttctcagcggaggagccaccgctgcagctccaacgtcttcccagacactgccacctgctctgcaagtttccccgcttcggattcctcaggctagaagc------ag-----gcgtccatttcagccacagcgaggaatccgatgccttgctaatgtgact-----gagcttcg i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1226327 236 - 2164891 ----------------------tggtgttgtgaaggcccatggctttccacgtaactgtggccaccgagcctggaag-agcgttttagatctgctgtttctcagtggaggagccgccacttcagctccagcgtcctcccagacactgccacctcctctgcaagtttccacgcttcggattcctcaggctagaagc------ag-----gcgtccatttcagccacagcgaggaatccgatgccttgctggtttgggcctcggaagcttcg i cebCap1.NW_016107695v1 C 0 I 41 s aotNan1.NW_018494782v1 1480247 215 - 1813869 ----------------------tg--gtcgtgaaggcccatggctttccacgtaac-gtggccactgagcctggaag-agcgtttgagatctgctgtttctcagcggaggagccgccactgcagctccaacgtcctcccagacactgccacctgctctgcaagttcccacgcttcggattcctcaggctagaagc------ag-----gcgcccatttcagccacagcgaggactctgatgcc------------------gaagctgtg i aotNan1.NW_018494782v1 C 0 C 0 s canFam3.chr1 56153665 223 + 122678785 ----------------------CTGAGCCACAGAGGCCTGTG--TTTCCTGCGTACCGTGGCTGCCCTCCGTGGCGGCAGTGCCTTGGA--CAGCATTTATTAGGAGAGACTCTGCCCCTGTGGCCACAGGGTGGGCCCTGCCGCTGATGCATCCTCCGAGAGCT-CAGTGCTGCGGCTTCCCCTAGCTCACAGCCGTCGAGG-----GGATTCCTCGAAGC---------------GCTGCCCTCCTCAGATGGGCCTTCCCAGGCTTG i canFam3.chr1 I 19 C 0 s dasNov3.JH569188 535308 206 + 760995 ttgcaccaatcacttttcaacttagagtcgtgaatgtccagggtttcccacataaccgtgg--------cctgcaag-gaca-tagtcatgcagcatttcttaataatgtggccactattgtagccacattattctcccagccactgactcccattctgcacatttcaatgctgttgctttcttgggcttaccag------ag-----gtgtt--------------aaaggaat------------tagttt----------------- i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10928459 3032 - 12073884 I a score=336917.000000 s hg38.chr6_KB021644v2_alt 78583 43 + 185823 ctgactgcaacatctacgggttgcac-ctgttcagccaggccac- s panTro5.chr6 1885165 43 - 175400573 ctgactgcagcatccaggggttgcac-ctgttcagccaggccac- i panTro5.chr6 C 0 C 0 s panPan2.chr6 171768512 43 + 173848474 ctgactgcagcatccaggggttgcac-ctgttcagccaggccac- i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11450850 43 - 12463322 ctgactgcaacatccaggggttgcac-ctgttcaaccaggccac- i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156279719 43 + 157873769 ttgactgcaacgtccaggggttgcac-ctgttcggccaggccac- i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170306043 43 + 172585720 ttgactgcagtgtccagggattgcac-ccgtttggccaggccac- i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169051880 43 - 170955103 ttgactgcagtgtccagggattgcac-ccgtttggccaggccac- i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8338579 43 + 10161646 ttgactgcagtgtccagggattgcac-ccgtttggccaggccac- i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1369087 43 + 3144229 ttgactgcagtgtccagggattgcat-ccgtttggccaggcccc- i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96647485 43 + 98384682 ttgactgcagcgtccaggggttgcac-ccgtttggccaggtcac- i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8192261 43 - 10857215 ttgactgcagtgtccagggattgcac-ccgtttggccaggcccc- i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15586351 43 - 23502949 ttgactgcagtgtccaggggtggcac-ccgtttgtccaggccac- i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169856063 42 + 171630274 -tgactgagacgtccagcggtggcgc-ctgtggggccaggccac- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1269442 42 - 2905041 -tgactgagacgcccagcggtggtac-ctgctgggccaggccac- i saiBol1.JH378287 C 0 C 0 s aotNan1.NW_018494782v1 1480462 42 - 1813869 -tgactgagatgtccagcggtggcgc-ctgttgggccaggccac- i aotNan1.NW_018494782v1 C 0 C 0 s canFam3.chr1 56153888 42 + 122678785 -TGCCTGAAGCGTCCAGAGGTCACTC-ACATTCAGCTAGGCCTG- i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 535514 42 + 760995 ---actgcaacattgaagggtggttctttgtccagtgataaccct i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10928459 3032 - 12073884 I e cebCap1.NW_016107695v1 1226563 41 - 2164891 I a score=1027465.000000 s hg38.chr6_KB021644v2_alt 78626 113 + 185823 caggaataacccccaaga-------gctgcc---tgtccagcgagctACAGCAGACCTGGCGGAACAGTCTCCATACGGGAAATAA---GAGGCCTT--GCCTGTGAAGTGCACCCTAACACGTGGGG s panTro5.chr6 1885208 113 - 175400573 caggaataacccccaaga-------gctgcc---tgtccagcgagctACAGCAGCCCTGGCGAAACAGTCTCCATACAGGAAATAA---GAGGCCTT--GCCTGTGAAATGCACCCTAACACGTGGGG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171768555 113 + 173848474 caggaataacccccaaga-------gctgcc---tgtccagcgagctACAGCAGCCCTGGCGAAACAGTCTCCATACAGGAAATAA---GAGGCCTT--GCCTGTGAAATGCACCCTAACACGTGGGG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11450893 113 - 12463322 caggaataacCCCCACGA-------GCTGCC---TGTCCAGCGAGCTACAGCAGCCCTGGCGAAACAGTCTCCATACAGGAAATAA---GAGGCCTT--GCCTGTGAAATGCACCCTAACACATGGGG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156279762 111 + 157873769 caggaataacctccaagA-------GCTGCC---TGTCCAGCGAGCTACAGCAGCCCTGGCAAAACAGTCTCCATACGGGAAAT-----GAGGCCTT--GCCTGTGAAATGCACCCTAACACATGGGG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170306086 113 + 172585720 caggaataacccccaagc-------actgcc---tgtccagcgagcAACAGCGGCCCTGGCAGAATGGTCTCCAGACAGGAAACAA---GAGGCCTT--GCTTGTGAAATGCACCTTAACACATGGGG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169051923 113 - 170955103 caggaataacccccaagc-------actgcc---tgtccagcgagcAACAGCGGCCCTGGCAGAATGGTCTCCAGACAGGAAACAA---GAGGCCTT--GCTTGTGAAATGCACCTTAACACATGGGG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8338622 113 + 10161646 caggaataacccccaagc-------actgcc---tgtccagcgagcAACAGCGGCCCTGGCAGAACGGTCTCCAGACAGGAAACAA---GAGGCCTT--GCTTGTGAAATGCACCTTAACACATGGGG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1369130 113 + 3144229 caggaataaccccccagc-------actgcc---tgtccagcgagcGACAGCAGCCCTGGCAGAACGGTCTCCACACAGGAAATAA---GAGGCGTT--GCTTGTGAAATGCACCGTAACGCATGGGG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96647528 113 + 98384682 caggaataacccccaagc-------actgcc---tgtccagcgagcaacagcagccctggcaaaacggtctccagacaggaaataa---gaggcctt--gcttgtgaaatgcaccTTAACACATGGGG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8192304 113 - 10857215 caggaataaccccccagc-------accgcc---tgtccagcgagcGACAGCGGCCCTGGCAGAACGGTCTCCAGACAGGAAATAA---GAGGCGTT--GCTTGTGAAATGCACCATAACGCATGGGG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15586394 113 - 23502949 caggaataacccccaagc-------actgcc---tgtccagcgagcgacagcagtcctggcagaacggtctccagacaggaaataa---gaggcctt--gcttgtgaaatgcaccctaaCACATGGGG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169856105 112 + 171630274 caggaataacc-ctaagt-------gctgcc---tgcacagcgagcgacagcaacTCTGGCAAAATGGACCGCATGCAAGAAATAA---GAGGCCTG--GCTTGCAAAAGGCACCCTCACACGTCGGG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1269484 111 - 2905041 caggaataacC-CTCGGT-------GCGGCC---TGCGCAGCGAGCGACAGCAACCCTGGCAGGATGGTCTCCAT-CAGGAAATAA---GAGGCCTG--GCTTGCAAAAGGTACCCTCGCACGTGGGG i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1226604 111 - 2164891 caggaatagcc-ctaagt-------gctgcc---tgcgcagccagcgacagcaacCCTGGCAGAGCGGTCTCCAT-CAACAAATAA---GAGTCCTG--GCTTGCAAAAGGCACCCTCACACGTGGGG i cebCap1.NW_016107695v1 I 41 C 0 s aotNan1.NW_018494782v1 1480504 112 - 1813869 caggaataacc-ctaagt-------gctgcc---tgcgcagcgagctACGGCAACCCTGGCAGAATGGTCTCCGTGCAAGAAATAA---GAGGCCTG--GCTTGCAAAAGGCGCCCTCACACGTGGGG i aotNan1.NW_018494782v1 C 0 C 0 s canFam3.chr1 56153930 124 + 122678785 CCAGGCTGACCCCCAGGCCCCTGGGGCTGACCTTTGTGCAGCGGGAGGAGACCAGCCTGTCACAGCTGTCCCTGCACAGACGACGA---TCCATCCTGAGTTTGTGAA-TGTACCCTCACAGCTGGGG i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 535556 116 + 760995 cagtcatcaacattcaat-------ttcaca---tgtgcagcaggcaatgacagctctgtcacaactgtccttggacaataattcatctaatgtctt--atttgtaaagcgcattctaacttatgagg i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10928459 3032 - 12073884 I a score=1288639.000000 s hg38.chr6_KB021644v2_alt 78739 152 + 185823 GACGATAAGAGATG-GAAAATTGTGTATCCCAGGACCGAAGACGTATGGTC-ACTCAGGACCCACT-AAAGCTGATATTTTATC-AGGAGCAAAAATAGAAAATGAGACATTATTCCAATTGTATTTTATATAATACAAACTGCTGGGAACATGTG s panTro5.chr6 1885321 152 - 175400573 GACGATAAGAGATG-GAAAATTGTGTATCCTAGGACCGAAGACGTATGGTC-ACTCAGGACCCACT-AAAGCTGATATTTTATC-AGGAGTAAAAATAGAAAATGAGACATTATTCCAATTGTATTTTATATAATACAAACTGCTGGGAACATGTG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171768668 152 + 173848474 GACGATAAGAGATG-GAAAATTGTGTATCCTAGGACCGAAGACGTATGGTC-ACTCAGGACCCACT-AAAGCTGAAATTTTATC-AGGAGTAAAAATAGAAAATGAGACATTATTCCAATTGTATTTTATATAATACAAACTGCTGGGAACATGTG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11451006 152 - 12463322 GATGATAAGAGATG-GAAAATTGTGTATCCCAGGACCGAAGACGTATGGTC-ACTCAGGACCCACT-AAAGCTGATATTTTATC-AGGAGCAAAAATAGAAAATGAGACATTATTCCAATTGTATTTTATATAATACAAACTGCTGGGAACATGTG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156279873 144 + 157873769 GAAGATAAGAGATG-GAAAATTGTGTATCCCAGGACTGATGGCGTATGGTC-ACTCAGGACCCACT-AAAGCTGATATT------AGGAGCAAAGATAGAAA---AGACATTATTCCAGTCGTATTTTATATAATACAAACCGCTGGGAACATGTG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170306199 133 + 172585720 GAAGATAAGAGATG-GAAAACTGTGTA-------------AATGTGTGGTC-ACTCAGGACCCACT-AAAGCTGATATTTTATC-AGGAGCAAAAATAGAAAATGAGACATT------ATTGTATTTTATATAATATGAACTGCTGGGAACATGTG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169052036 133 - 170955103 GAAGATAAGAGATG-GAAAACTGTGTA-------------AATGTGTGGTC-ACTCAGGACCCACT-AAAGCTGATATTTTATC-AGGAGCAAAAATAGAAAATGAGACATT------ATTGTATTTTATATAATATGAACTGCTGGGAACATGTG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8338735 133 + 10161646 GAAGATAAGAGATG-GAAAACTGTGTA-------------AATGTGTGGTC-ACTCAGGACCCACT-AAAGCTGATATTTTATC-AGGAGCAAAAATAGAAAATGAGACATT------ATTGTATTTTATATAATATGAACTGCTGGGAACATGTG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1369243 133 + 3144229 GAAGATAAGAGATG-GAAAACTGTGTA-------------AACGTGTGGTC-ACTCAGGACCCACT-AAAGCTGATATTTTATC-AGGAGCAAAAATAGAAAATGAGACATT------ATTCTATTTTATATAATATGAACTGCTGGGAACATGTG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96647641 139 + 98384682 GAAGATAAGAGATG-GAAAACTGTGTA-------------AACCTGTGGTC-ACTCAGGACCCACT-AAAGCTGATATTTTATT-GGGAGCAAAAATAGAAAACCAGACATTATTCCAATTGTATTTTGTATAATATGAACTTCTGGGAACATGTG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8192417 133 - 10857215 GAAGATAAGAGATG-GAAAACTGTGTA-------------AACGTGTGGTC-ACTCAGGACCCACT-AAAGCTGATATTTTATC-AGGAGCAAAAATAGAAAATGAGACATT------ATTGTATTTTATATAATATGAACTGCTGGGAACATGTG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15586507 139 - 23502949 GAAGATAAGAGATG-GAAAACGGTGTA-------------AACGTGTGGTC-ACTCAGGACCCACT-AAAGCTGATATTTTATC-GGGAGCAAAAATAGAAAACGAGACATTATTCCAATTGTATTTTATAGAATATGAACTGCTGGGAACATGTA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169856217 136 + 171630274 GGCGGTGACAGATG-GAAGATGGTTTGTCCCAGGACTGAC-ATGTATAGTC-ACTCA----------------GGTATTTTATC-AGGAGCAAAAATAGAAAATGAGACAGCATTCCAACTGTATTTTATATAATACAGACCACTGGGAGCAGGTG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1269595 152 - 2905041 GGCGGTGACAGATG-GAAAATGGTGTGTCCCAGGACCGATGACGTGTGGTC-CCTCAGGACCCACT-AAAGCTGGCATTTTATC-AGGAGCAAAAACAGAAAATGAGACAGCATTCCAACTGTATTTTATATAATGCAGACCGCTGGGAGCATGTG i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1226715 152 - 2164891 GGCAGTGACAGATG-GAAAATGGTGTGTCCCAAGACCGATGACATGTGGTC-ACTCAGGACACACT-AAAGCTGGTATTTTATC-AGGAGCAAAAACAGAAAATGAGACAGTATTCCAACTGTATTTTACATAATACAGACCACTGGGAGCATGTG i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1480616 137 - 1813869 GGCGGTGACAGATG-GAAAATGGTGTGTCCCAGGACCGATGATGTATGGTC-ACTCA----------------AGTATTTTATC-AGGAGCAAAAATAGAAAATGAGACAGTATTCCAACAGTATTTTATACAATACAGACCGCTGGGAGCGTGCG i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10931491 148 - 12073884 GGTGGTAAAATGTG-GGAAACTCAGCATCCTGAGACTGTTGAC----AGTC-TTTCAGGACGCCTT-AAAGGTGATGTTTTATA-AGGTAGGGAAAAGACAAAGGAGGCTTCATTTCAACTGTGTTCTGAATAATGTAAGTTACAGGGAACATGAG i otoGar3.GL873575 I 3032 C 0 s canFam3.chr1 56154054 148 + 122678785 --AGGTCAACTATG-GGAGATGATGCCTCATAGGCCT---GATGCATGGGCTGCTCCATCCTTCTT-GGAACTGACATTTTATA-AGGAGTGGAAATAGAAACAGAAACGTCACTGCAACTGCCTTTGGGGTGTGACAGAGTGTGGGGAGCATGTG i canFam3.chr1 C 0 I 1010 s dasNov3.JH569188 535672 151 + 760995 --tgataaaataggaaaaaattatgcagtttaagattggaggaatatggTA---TTGGGACTTCTTAAAAGCTGATATGTTAAAGAAGAGTGGAATTAAAAAAGGAAATGATATTCCAATTCCATGCTATATAATGCAAATTTAGGGGAACATATG i dasNov3.JH569188 C 0 I 4 a score=1911551.000000 s hg38.chr6_KB021644v2_alt 78891 209 + 185823 GGAACTTGCACATTTGGGATGTCCTCTGCCAGGTCTTT--------------GGCCTTTTGTTTTTGGGGT--GTATGTAAAATCTAAGTCATCATCGTTAGGGAACTGGACACCTCAGCCTCTCTCTATCTGGTTCTGTTGTCAAGAAAGCCGTGGAAAAGGTAAAATCTTAGGGCGTGAGGGGCCTGAGGGTT----------------------------CCGTGAGTGAGGTGTGAATGAGCTGGTGC--------------------------------------------------------C s panTro5.chr6 1885473 209 - 175400573 GGAACTTGCACATTTGGGATGTCCTCTGCCAGGTCTTT--------------GGCCTTTTGTTTTTGGGGT--GTATGTAAAATCTAAGTCATCATCGTTAGGGAACTGGACACCTCAGCCTCTCTCTATCTGGTTCTGTTGTCAAGAAAGCCGTGGAAAAGGTAAAAACTTAGGGCGTGAGGGGCCTGAGGGTT----------------------------CCGTGAGAGAGGTGTGAATGAGCTGGTGC--------------------------------------------------------G i panTro5.chr6 C 0 C 0 s panPan2.chr6 171768820 209 + 173848474 GGAACTTGCACATTTGGGATGTCCTCTGCCAGGTCTTT--------------GGCCTTTTGTTTTTGGGGT--GTATGTAAAATCTAAGTCATCATCGTTAGGGAACTGGACACCTCAGCCTCTCTCTATCTGGTTCTGTTGTCAAGAAAGCCGTGGAAAAGGTAAAAACTTAGGGCGTGAGGGGCCTGAGGGTT----------------------------CCGTGAGAGAGGTGTGAATGAGCTGGTGC--------------------------------------------------------G i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11451158 209 - 12463322 GGAACTTGCACATTTGGGATGTCCTCTGCCAGGTCTTT--------------GGCCTTTTGTTTTTGGGGT--GTATGTAAAATGTAAGTCATCATCGTTAGGGAACTGGACACCTCAGCCTCTGTCTATCTGGTTCTGTTGTCAAGAAAGCCGTGGAAAAGGTAAAAACTTAGGGCGTGAGGGGCCTGAGGGTT----------------------------CCATGAGAGAGGTGTGAATGAGCTGGTGC--------------------------------------------------------G i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156280017 209 + 157873769 GGAGCTTGCACACTTGGGATATCCTCTGCCAGGTCTTC--------------GGCCTTTTGTTTTTGGGGT--GTATGTAAAATCTAAGTCATCATCGTTAGGGAACTGGACAACTCAGCCTCTCTCTGTCTGGTTCTGTTGTCAAGAAAGCCATGGAAAAGGTAAAAACTTAGGGCTTGAGGGGCCTGAGAGTT----------------------------CCATGAGAGAGGTGTGAATGAGCTGGTGC--------------------------------------------------------A i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170306332 209 + 172585720 GGAACTTGCACATTTGAGATGTCCTCTGCCAGGCCTTT--------------GGCCTTTTGCTTTTGGGGT--GTATGTAAAATCTAAGTCATCATTGTTAAGGAACTGGACACCTCAGCCTCTCTCTATCTGGTTCTATTGTCAAGAAAGCCATGGAAAAGGTAAAAACTTAGGGCTTGAGGGGTCTGAGGGTT----------------------------CCATGAGAGAGGTGTGAATGAGCTGGTGC--------------------------------------------------------G i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169052169 209 - 170955103 GGAACTTGCACATTTGAGATGTCCTCTGCCAGGCCTTT--------------GGCCTTTTGCTTTTGGGGT--GTATGTAAAATCTAAGTCATCATTGTTAAGGAACTGGACACCTCAGCCTCTCTCTATCTGGTTCTATTGTCAAGAAAGCCATGGAAAAGGTAAAAACTTAGGGCTTGAGGGGTCTGAGGGTT----------------------------CCATGAGAGAGGTGTGAATGAGCTGGTGC--------------------------------------------------------G i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8338868 209 + 10161646 GGAACTTGCACATTTGAGATGTCCTCTGCCAGGCCTTT--------------GGCCTTTTGCTTTTGGGGT--GTATGTAAAATCTAAGTCATCATTGTTAAGGAACTGGACACCTCAGCCTCTCTCTATCTGGTTCTATTGTCAAGAAAGCCATGGAAAAGGTAAAAACTTAGGGCTTGAGGGGTCTGAGGGTT----------------------------CCATGAGAGAGGTGTGAATGAGCTGGTGC--------------------------------------------------------G i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1369376 237 + 3144229 GGAACTTGCACATTTGAGATGACCTCTGCCAGGCCTTT--------------GGCCTTTTGTTTTTGGGGT--GTATGTAAAATCTAAGTCATCATTGTTAAGGAACTGGACACCTCAGCCTCTCTCTATCTGGTTCTATTGTCAAGAAAGCCATGGAAAAGGTAAAAACTTAGGGCTTGAGGGGTCTGAGGGTTCCATGAGAGAGGTGTGAATGAGCTGGTGCCATGAGAGAGGTGTGAATGAGCTGGTGC--------------------------------------------------------G i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96647780 293 + 98384682 GGAACTAGAACATTTGAGATGTCCTCTGCCAGGCCTTT--------------GGCCTTTTGTTTTTGGGCT--GTATGTAAAATCTAAGTCATCATCGTTAAGGAACTGGACGCCTCAGCCTCTCTCTATCTGGTTCTATTGTCAAGAAAGCCGTGGAAAAGGTAAAAACTTAGGGCTTGAGGGGTCTGAGGGTTCCATGAGAGAGGTGTGAATGAGCTGGTGCCATGAGAGAGGTGTGAATGAGCTGGTGCCATGAGAGAGGTGTGAATGAGCTGGTGCCATGAGAGAGGTGTGAATGAGCTGGTGCA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8192550 293 - 10857215 GGAACTTGCACATTTGAGATGACCTCTGCCAGGCCTTT--------------GGCCTTTTGTTTTTGGGGT--GTATGTAAAATCTAAGTCATCATTGTTAAGGAACTGGACACCTCAGCCTCTCTCTATCTGGTTCTATTGTCAAGAAAGCCATGGAAAAGGTAAAAACTTAGGGCTTGAGGGGTCTGAGGGTTCCATGAGAGAGGTGTGAATGAGCTGGTGCCATGAGAGAGGTGTGAATGAGCTGGTGCCATGAGAGAGGTGTGAATGAGCTGGTGCCATGAGAGAGGTGTGAATGAGCTGGTGAG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15586646 209 - 23502949 GGAACTTGCACATTTGAGATGTCCTCTGCCAGGCCTTT--------------GGCCTTTTGTTTTTGGGGT--GTATGTAAAATCTAAGTCATCATCGTTAAGGAACAGGACACCTCAGCCTCTCTCTATCTGGTTCTATTGTCAAGAAAGCTGTGGAAAAGGTAAAAACTTAGGGCTTGAGGGGTCTGAGGGTT----------------------------CCATGAGAGAGGTGTGAAGGAGCTGGTGC--------------------------------------------------------C i colAng1.NW_012114488v1 C 0 I 112 s calJac3.chr4 169856353 207 + 171630274 GGAGCTTGCTCATTTGAAACGTCCTCTGCCAGGCCTTT---------------GCCTTTTGTTTCTGGGGT--GTATGTAAGACCTAAGTCCACATCGTTAAGAAACTGGACACCTCAGTGACTCTCAGTCTGGTTCTGTTGTCAGGAAAACCGTGGAAAAGGTAAAACCT-ATGGCTTGAGGGGCCTGAGGGTT----------------------------TGATGAGAAAGGTCCGAATGGGCTGAGGC--------------------------------------------------------A i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1269747 202 - 2905041 GGAACTTGCTCATTTGAGAATTCCTCTGTGAGGCCTTT---------------GCCTTTTGTTTCTGGGGT--GTACGTAAGATCGAAGTCCTCATCGTTAAGGAACTGGGCACCTCAGGGACTCTCAATCTGGTTCTGTTGCCAGGAAAACCATGGAAAAGGTAAAACCT-----TATGCGGGGCCTGAGGGTT----------------------------CGATGAGAAA-GTCCCAGTGGGCTGAGGC--------------------------------------------------------A i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1226867 197 - 2164891 GGAAC-TGCTGCTTTGAGATGTCCTCTGCGAGGCCTTT---------------GCCTTTTGTTTTTGGGGT--GTATGTAAGATCTAAGTCCTCGTTGTTAAGGAACTGGACACCTCAGGGACTCTCAGCCTGGGTCTGTTGTCA----------GGAAAAGGTAAAACCTTATGGCTTGAGGGGACTGAGGGTT----------------------------CGATGAGGAAGGTCCGAATGGGCTGAGGC--------------------------------------------------------A i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1480753 208 - 1813869 GGAACTTGCTCATTTGAGACGTCCTCTGCCAGGCCTTT---------------GCCTTATGTTTTTGGAGT--GTAAGTAAGATCTAAGTCCTCATCGTGAAGGAACTGGACACCTCAGCGACTCTCAATCTGGTTCTGTCGTCAGGAAAACCGTGGAAAAACTAAAACGTTATGGCTTGAGAGGCTCGAGGGTT----------------------------CGATGAGAAAGGTCCGAATGGGCCGAGGC--------------------------------------------------------A i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10931639 155 - 12073884 ATAACTC-TTCCTCTAAGATTTCACCAGCCAA--CTTT--------------GGTCTTTTGTTTCTGGGGT--GTATGTGAAATTCAGGTCA------CTAAGGAGGT---------------TCTCAATCTCATCATGTTGTCAAG-------------------AGTCCTGGGCTTTGTGGGG--------------------------------------TGGAGAGAGAAGTCTGAATGAGGAGAGAC--------------------------------------------------------- i otoGar3.GL873575 C 0 C 0 s dasNov3.JH569188 535827 218 + 760995 ATAACTCAGACTTTCCTAATTTCATCTGTTGGTTTTTTTTTTTTCTGCATTCAAGTTTCTGTTTTTGATATACGTATTTAAAA-CTAGGTCAATTTTGTAAAGGGATTGGACATCTCAGCATTTCTAAATCAG------CTACCAAAAGAGCTATGGAAAAAGTAAGAACTTAAAATTTATGGGCTTCCAGGGTT----------------------------TGATGAGTAATGTCTAAATGAGATGAATC--------------------------------------------------------A i dasNov3.JH569188 I 4 C 0 e canFam3.chr1 56154202 1010 + 122678785 I a score=414719.000000 s hg38.chr6_KB021644v2_alt 79100 48 + 185823 TACACACATTGCTGGTGGTGAAGCAACAGCAAACAGTCACCTCGGGGG s panTro5.chr6 1885682 48 - 175400573 TACACACATTGCTGGTGGTGAAGCAACAGCAAACAGGCAACTCGGGGG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171769029 48 + 173848474 TACACACATTGCTGGTGGTGAAGCAACAGCAAACAGGCAACTCGGGGG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11451367 48 - 12463322 TACACACATTGCTGGTGGTGAAGCAACAGCAAACAGTCAACTCGGGGG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156280226 48 + 157873769 TACACACATTGCTGGTGGTGAAGCAACAGCAAACAGGCAACTCGGGGG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170306541 48 + 172585720 TACACATATTGCCGGTGGTGAAGCAACAGCAAACAGGCAACTCGGGGG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169052378 48 - 170955103 TACACATATTGCCGGTGGTGAAGCAACAGCAAACAGGCAACTCGGGGG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8339077 48 + 10161646 TACACATATTGCCGGTGGTGAAGCAACAGCAAACAGGCAACTCGGGGG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1369613 48 + 3144229 TACACATATTGCTGGTGGTGAAGCAACAGCAAACAGCCAACTCGGGTG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96648073 48 + 98384682 TACACACATTGCCGGTGGTGAAGCAACAGCAAACAGGTAACTCGGGTG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8192843 48 - 10857215 TACACATATTGCTGGTGGTGAAGCAACAGCAAACAGCCAACTCGGGTG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15586967 48 - 23502949 TACACATATTGCCGGTGGTGAAGCAACAGCAAACAGGCAACTCGGGGG i colAng1.NW_012114488v1 I 112 C 0 s calJac3.chr4 169856560 47 + 171630274 CACACACACTGCCGGTGGTGAATCAGGGGCAAACAGGCAACGT-GGGG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1269949 47 - 2905041 CACACACCCTGCCGGTGGTGAGTCAGAGGGAAACAGGCAACCT-GGGG i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1227064 47 - 2164891 CACACACACTGCCGGTGGTGAATCAGTGGCAAACGGGCAACCT-GGGG i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1480961 44 - 1813869 CACACA--CTGCCGGTGGTGAATCCGTGGCAAACAGGCAACTT--GGG i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10931794 35 - 12073884 -ACACACAT------------GGAAACACATGACAGGTGACACTGGGG i otoGar3.GL873575 C 0 C 0 s dasNov3.JH569188 536045 47 + 760995 TAGACAAGGTAAGGGT-TTTAAGAAACCTCAAACGAGTAACTCAATGG i dasNov3.JH569188 C 0 I 87 e canFam3.chr1 56154202 1010 + 122678785 I a score=796029.000000 s hg38.chr6_KB021644v2_alt 79148 95 + 185823 CTGTTCATCCTCCAGCAGTGACACTGTGACCCGTGACCACTGCACAGG----------------------------------------GTTCCATGTAAGAAAAAGCATCCAGGCAGAGGCCCTGGTGAGCCGTT s panTro5.chr6 1885730 95 - 175400573 CTGTTCATCCTCCAGCAGTGAAACTGTGACCCGTGACAACTACACAGG----------------------------------------GTTCCATGTAAGAAAAAGCATCCAGGCAGGGGCCCTGGTGAGCCGTT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171769077 95 + 173848474 CTGTTCATCCTCCAGCAGTGAAACTGTGACCCGTGACAACTACACAGG----------------------------------------GTTCCATGTAAGAAAAAGCATCCAGGCAGGGGCCCCGGTGAGCCGTT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11451415 95 - 12463322 CTGTTCATCCTCCAGCAGTGAAACTGTGACCTGTGACAACTGCACAGG----------------------------------------GTTCCATGTAAGAAAAAGCATCCAGGCAGAGGCCCTGGTGAGCCGTT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156280274 95 + 157873769 CTGCTCATCCTTCAGCAGTGAAACTGTGACCCGTGACCACTGCTCAGG----------------------------------------GTTCCATGTAAGAGAAAGCATCCAGGCAGAGGCCTCGGTGAGCCGTT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170306589 95 + 172585720 CTGTTCATCCTTCAGCAGTGACACTGTGACCCGTGACCACTACTCAGG----------------------------------------ATTCCATGTAGGAAAAAGCATCCCGGCAAAGGCCCTGGTGAGCCGTC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169052426 95 - 170955103 CTGTTCATCCTTCAGCAGTGACACTGTGACCCGTGACCACTACTCAGG----------------------------------------ATTCCATGTAGGAAAAAGCATCCCGGCAAAGGCCCTGGTGAGCCGTC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8339125 95 + 10161646 CTGTTCATCCTTCAGCAGTGACACTGTGACCCGTGACCACTACTCAGG----------------------------------------ATTCCATGTAGGAAAAAGCATCCCGGCAAAGGCCCTGGTGAGCCGTC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1369661 95 + 3144229 CTGTTCATCCTTCAGCAGTGACACTGTGACCTGTGACCACTGCTCAGG----------------------------------------ACTCCATGTAGGAAAAAGCATCCAGGCAAAGGCCCTGGTGAGCCGTC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96648121 95 + 98384682 CTGTTCATCCTTCAGCAGTGACACTGTGACCCCTGACCACTACCCAGG----------------------------------------ACTCCATGTAAGAAAAAGCATCCAGGCAAAGGCCCTGGTGAGCCGTC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8192891 95 - 10857215 CTGTTCATCCTTCAGCAGTGACACTGTAACCTGTGACCACTGCTCAGG----------------------------------------ACTCCACGTAGGAAAAAGCATCCAAGCAAAGGCCCTGGTGAGCCGTC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15587015 95 - 23502949 CTGTTCATCCTTCAGCAGTGACACTGTGACCTGTGACCACTGCCCAGG----------------------------------------ATTCCATGTAAGAAAAAGCATCCAGGCAGAGGCCCTGGTAAGCCGTC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169856607 91 + 171630274 CTGTTCATCCTTCAGCAGCGAAACTGTGATCTGTGACCCCTGTCCAGG----------------------------------------GTTCAGTGTGAGAAACA-CACCTGGGCAGAGGTCC---TGAGCCGGT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1269996 131 - 2905041 CTGTTCATCCTTCAGCAGTGAAACTGTGACCTGTGACACCTGCCCAGGGTTCAAGCAGTGAAACTGTGACCCGTGACCCCTGTGCAGCGTTCAGTGTAAGAAACA-CACCCGGGCACAGGTCC---TGAGCCGTT i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1227111 91 - 2164891 CTGTTCATCCTTCAGCAGTGAAACTGTGACCCGTGACCCCTGTCCAGG----------------------------------------GTTCAGGGTAAGAAACA-CGTCCGGGCAGAGGTCC---TGAGCTGTT i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1481005 91 - 1813869 CTGTTCATCCTTCAGCAGTGAAACTGTGACCCGTGACCCCTGTCCAGG----------------------------------------GTTCAGTGTAAGAAACA-CATCCGGGCAGAGGTCC---TGAGCCGTT i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10931829 87 - 12073884 CCATCCAGCA-CCAGCACGG-----GTCACCCATGACCGCTGCCCTCT----------------------------------------TTTCACCTTGAGAGATG--TTTCCGGCAAGATGCTGGACTTGACACC i otoGar3.GL873575 C 0 C 0 e dasNov3.JH569188 536092 87 + 760995 I e canFam3.chr1 56154202 1010 + 122678785 I a score=1257761.000000 s hg38.chr6_KB021644v2_alt 79243 140 + 185823 GGATAGTCAACATTCGCTTGGAGAAGTTTGCTACACTCAGGCCAGACCAACTGCTAGAAGCAACTGCCTGGCTACATTTTTGTTTTTA-----TGTTTGGAAAGACAAAGGTAAAGCCGTGGGGAGCGAGATCGGTCTGGATAAG s panTro5.chr6 1885825 140 - 175400573 GGATAGTCAACATTCTTTTGGAGAAGTTTGCTACACTCAGGCCAGACCAACTGCTAGAAGCAACTGCCTGGCTACATTTTCGTTTTTA-----TGTTTGGAAAGACAAAGGTAAAGCCGTGGGGAGCGAGATCGGTCTGGATAAG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171769172 140 + 173848474 GGATAGTCAACATTCTTTTGGAGAAGTTTGCTACACTCAGGCCAGACCAACTGCTAGAAGCAACTGCCTGGCTACATTTTTGTTTTTA-----TGTTTGGAAAGACAAAGGTAAAGCCGTGGGGAGCGAGATCGGTCTGGATAAG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11451510 140 - 12463322 GGATAGTCAACATTCTCTGGGAGAAGTTTGCTACACTCAGGCCAGACCAACTGCTAGAAGCAACTGCCTGGCTACATTTTTGTTTTTA-----TGTTTGGAAAGACAAAGATAAAGCCGTGGGGAGCGAGATCGGTCTGGATAAG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156280369 140 + 157873769 CGATAGTCAACGTTCTCTTGGAGAAGTTTGCTACACTCAGGCCAGACCAAGTGCTAGAAGCAACTGAGTGGCTACATTTTTGTTTTTA-----TGTTTGGAAAGACAAAGGTAAAGCCGTGGGGAGTGAGAGTGGTCTGGATAAA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170306684 140 + 172585720 CGATAGTCAATGTGCTCTTGGAGAAGTTTGCTACACTCAGGCCAGACCAGGTGCTAGAAGCAACTGCCTGGCTACATTTTTGTTTTTA-----TGTTTGGAATGACAAAGGTAAAGCCAGGGGGAGTGAGATCGGTCTGGATAAA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169052521 140 - 170955103 CGATAGTCAATGTGCTCTTGGAGAAGTTTGCTACACTCAGGCCAGACCAGGTGCTAGAAGCAACTGCCTGGCTACATTTTTGTTTTTA-----TGTTTGGAATGACAAAGGTAAAGCCAGGGGGAGTGAGATCGGTCTGGATAAA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8339220 140 + 10161646 CGATAGTCAATGTGCTCTTGGAGAAGTTTGCTACACTCAGGCCAGACCAGGTGCTAGAAGCAACTGCCTGGCTACATTTTTGTTTTTA-----TGTTTGGAATGACAAAGGTAAAGCCAGGGGGAGTGAGATCGGTCTGGATAAA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1369756 140 + 3144229 CGATAGTCAACGTGCTCTTGGAGAAGTTTGCTACACTCAGGCCAGACCAAGTGCTAGAACCAACTGCCTGGCTACATTTTTGTTTTCA-----TATTTGGAAAGACAAAGGTAAAGCCAGGGGGAGTGAGATCGGTCTGGATAAA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96648216 140 + 98384682 CAATAGTCAATGTGCTCTTGGAGAAGTTTACTACACTCAGGCCAGACCAAGTGCTAGAAGCAACTGCCTGGCTACATTTTTGTTTTCA-----TGTTTGGAAAGACAAAGGTAAAGCCAGGGGGAGTGAGATCGGTCTGGATAAA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8192986 140 - 10857215 CGATAGTCAACGTGCTCTTGGAGAAGTTTGCTACACTCAGGCCAGACCAAGTGCTAGAACCAACTGCCTGGCTACATTTTTGTTTTCA-----TATTTGGAAAGACAAAGGTAAAGCCAGGGGGAGTGAGATCGGTCTGGATAAA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15587110 140 - 23502949 CGATAGTCAATGTGCTCTTGGAGAAGTTTGCTACACTCAGGCCAGACTAAGTGCTAGAAACAATTGCCTGGCTACATTTTTGTTTTTA-----TGTTTGGAAAGACAAAGGTAAAGCCAGGGGGAGTGAGATCCGTCTGTATAAA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169856698 139 + 171630274 CAACAGTCAGCGTTCTCTCGGAGAAGTCTGCGACCCTCAGGCCAGGGCAAGTGCTGGAAGCAACTGCCTGGCTGTGCTTTTGTTTT-A-----TGTTCGAGAAGACAAAGGTGAAGCCACTGAGGGTGTCATCGCTCTGGATGAA i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1270127 138 - 2905041 CGGCAGTCGGCATTCTCTCGGAGAAGTCTGCTACCCTCAGGCCAGGGCAAGTGCTAGAAGCAACTGCCTGGCTATGA-TTTGTTTT-C-----TGTTTGCAAAGACAAAGGTAAAGCCACTGAGGGTGTCATCGGTCTGGATAAA i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1227202 138 - 2164891 CCACAGTCAGCATTCTCTCGGAGAAGTTTGCTCCCCTCAGGCCAGGGCAAGTGCTAGAAGCAGCTGCCTAGCTATGCTTTTCTTTT-A-----TGTTTCGAAAGACAAA-GTAAAGCCACTGAGGGTGTCATCGGTCTGGATAAA i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1481096 138 - 1813869 CAACAGTCAGCGTTCTCTCAGAGAAGTTTGCTACCCTCAGGCCAGGGCAAGTGCTAGACGCAACTGCCTGGCTGTGCTTTTGTTTC-G-----TGTGTGAAAAGACAAAGGTGAAGCCGCTCAGGGTGTAATCGGTCTGG-TGAA i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10931916 107 - 12073884 CAGTGGTCAATGTT----------AGTTTGCC-------------------------GGGCATATGTCTGGCTCCATGTTTGTTTTAA-ATGCTGTTTG--AGGACAGAGGTGAAGTCTTGAGGAGTGTGGCTGCCCACGGTAAG i otoGar3.GL873575 C 0 C 0 s dasNov3.JH569188 536179 124 + 760995 AAATTGTCAAC--TTCCTTAGAGGAATTAGTTACATTTTGGCCAAGCCAAGTTGTAGTAATAA-------------TTTTTGTTCTTAAATGCTTTTTAAGAAGACCAGGTTGTATC------AAGCTTGATAAACCTACATAAA i dasNov3.JH569188 I 87 I 262 e canFam3.chr1 56154202 1010 + 122678785 I a score=696817.000000 s hg38.chr6_KB021644v2_alt 79383 84 + 185823 GCCCAGATCCTCAAG-AACAGACCCCAGGAGTGTCAGGGGAGAAGGATGTGTGAGTTAACGTCGCTGTGATGCAAGCTGCCGTCT s panTro5.chr6 1885965 84 - 175400573 GCCCAGATCCTCAAG-AACAGACCCCAGGAGGGTCAGGGAAGAAGGATGTGTGAGTTAACGTCGCTGTGATGCAAGCTGCCGTCT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171769312 84 + 173848474 GCCCAGATCCTCAAG-AACAGACCCCAGGAGGGTCAGGGAAGAAGGATGTGTGAGTTAACGTCGCTGTGATGCAAGCTGCCGTCT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11451650 84 - 12463322 GCCCAGATCCTCAAG-AACAGACCCCAGGAGGGTCAGGGGAGAAGGATGTGTGAGTTAACGTCGCTGTGATGCAAGCTGCCGTCT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156280509 84 + 157873769 GCTGAGATCCTGGAG-AACAGACCCCATGAGGGTCAGGGGAAAAGCATGTGTGAGTTAACGTCGCTGTGATGCAAGCTGCCGTCT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170306824 84 + 172585720 GCCCAGATCCTGGAG-AACAGGCCCTGTGAGGGTCAATGGAGAAGCACGTGTGAGTTAAGGTCGCTGTGATGCATGCTGCCGTCT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169052661 84 - 170955103 GCCCAGATCCTGGAG-AACAGGCCCTGTGAGGGTCAATGGAGAAGCACGTGTGAGTTAAGGTCGCTGTGATGCATGCTGCCGTCT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8339360 84 + 10161646 GCCCAGATCCTGGAG-AACAGGCCCTGTGAGGGTCAATGGAGGAGCACGTGTGAGTTAAGGTCGCTGTGATGCATGCTGCCGTCT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1369896 84 + 3144229 ACCCAGATCCTGGAG-AACAGGCCCTGTGAGGGTCAATGGAGAAGCATGTGTGAGTTAAGGTTGCTGTGATGCAAGCTGCCGTCT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96648356 84 + 98384682 GCCCAGATCCTGGAG-AACAGGCCCCGTGAGTGTCAGTGGAGAAGCACGCGTGAGTTAAGGTTGCTGTGATGCAAGCTGCCGTCT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8193126 84 - 10857215 GCCCAGATCCTGGAG-AAGAGGCCCTGTGAGGGTCAATGGAGAAGCACGTGTGAGTTAAGGTTGCTGTGATGCAAGCTGCCGTCT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15587250 84 - 23502949 GCTCAGATCCTGGAG-AACAGGCCCTGTGAGGGTCGGTGGAGAAGCACGTGTGAGTTAAGGTCGCCGTGATGCAAGCTGCCATCT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169856837 80 + 171630274 GCGCAGATCCTGGGG-AACAGGCCCGAAGACTGTCCGGGAAGAAGC----GTGAGCTAACCTTGCCATGAAGCAGGCTTCAGTCT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1270265 80 - 2905041 GCCCAGATCCTGGGC-GACAGGCCCGATGAGGGTCAGGGAAGAAGC----GTGAGTTAACGTCGCCATGATGCAGGCTTCAGTCT i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1227340 80 - 2164891 GCCCAGATCCTGGGG-AACAGGCCCGATGAGGGTCAGGGAATAAGC----ATGAGTTAACGTTGCCGTGATGCAGGCTTTAGTCT i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1481234 80 - 1813869 GCCCAGATCCTGGGG-AACAGGCCCAATGAGGGTCAGGGAAGAAGC----GTGAGTTAACGTTGCCGTGATGCAGGCTTCAGTCT i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10932023 82 - 12073884 GC-CAGGTCTAGGGGCAGCTGAGCCCGTGGGGCCAGTTGCAGCAGGAGGAGTGGTTT--TGTCACAACGCTGAGAGCTTCAGTCT i otoGar3.GL873575 C 0 C 0 e dasNov3.JH569188 536303 262 + 760995 I e canFam3.chr1 56154202 1010 + 122678785 I a score=3499120.000000 s hg38.chr6_KB021644v2_alt 79467 337 + 185823 CA----------------------------------TTCTGCACAAGGTGAAAAGGGCGGAGTGAATCACTGAAGCCACTTAGGAGCCTTTTGTCTGGGAAAAA-ACAAAATCGGTCTGTTCAGTAGACTGACCCTTGA----CAGTCTAGAGAGAAAATGTGTCTGCAGCTGCAGTATTCTGCGTGAGTTCCTCACACAGGGCTTCCCAATTAATGTTGCTGATTGACTGATCA-AAA-AACCATCTGG-CACAGATGCTCTTACTGCACACTCGATGAGCGGCTGCTTC-TTCCTCGCCCTTCCTCAGCCTGAGGAACTG-CACAGAGCTTTCTTCTAGATTTGTTCTTTCGGAAGACAAGAAACCACCCTGTGGAGAG s panTro5.chr6 1886049 338 - 175400573 CA----------------------------------TTCTGCACAAGGTGAAAAGGGCGGATTGAATCACTGAAGCCACTTAGGAGCCTTTTGTCTGGGAAAAA-ACAAAATCGGTCTGTTCAGTAGACTGACACTTGATAGTCAGTCTAGAGAGAAAATGTGCCTGCAGCTGCAGTATTCTGCTTGAGTTCCTCACACAGGGCTTCCCAATTAATGTTGCTGATTGACTGATCA-AAA-AACCATCTGG-CACAGATGCTGTTACTGCACACCCGATGAGTG---GCTTC-TTCCTCGCCCTTCCTCAGCCTGAGGACCTG-CACAGAGCTTTCTTCTAGATTTGTTCTTTCGGAAGACAAGAAACCACCCTATGGAGAG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171769396 338 + 173848474 CA----------------------------------TTCTGCACAAGGTGAAAAGGGCGGATTGAATCACTGAAGCCACTTAGGAGCCTTTTGTCTGGGAAAAA-ACAAAATCGGTCTGTTCAGTAGACTGACACTTGATAGTCAGTCTAGAGAGAAAATGTGTCTGCAGCTGCAGTATTCTGCTTGAGTTCCTCACACAGGGCTTCCCAATTAATGTTGCTGATTGACTGATCA-AAA-AACCATCTGG-CACAGATGCTGTTACTGCACACCCGATGAGTG---GCTTC-TTCCTCGCCCTTCCTCAGCCTGAGGACCTG-CACAGAGCTTTCTTCTAGATTTGTTCTTTCGGAAGACAAGAAACCACCCTATGGAGAG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11451734 341 - 12463322 CA----------------------------------TTCTGCACAAGGTGAAAAGGGCGGATTGAATCGCTGAAGCCACTTAGGAGCCTTTTGTCTGGGAGAAA-ACAAAATCGGTCTGTTCAGTAGACTGACACTTGATAGTCAGTCTAGAGAGAAAATGTGTCTGCAGCTGCAGTATTCTGCTTGAGTTCCTCACACAGGGCTTCCCAATCAATGTTGCTGATTGACTGATCA-AAA-AACCATCTGG-CACAGATGCTGTTACTGCACACTCGATGAGCGGCTGCTTC-TTCCTCGCCCTTCCTCAGCCTGAGGACCTG-CACAGAGCTTTCTTCTAGATTTGTTCTTTCGGAAGACAAGAAACCACCCTATGGAGAG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156280593 339 + 157873769 CA----------------------------------TTCTGCACAAGGTGAAAAGGGCGGATTGAGTCACTGAAGCCACTTAGGAGCCTTTTGTCTGGGAAAAA-ACAAAATCGGTCTGTTCAGTAGACTGACACTTGCTAGTCAGTCTAG-GAGAAAATGTGTCTGCAGCTGCAGTATTCTGCTTGAGTTCCTCAC-CAGGGCTTCCCAATTAATGTTGCTGATTGACTGATCA-AAA-AACCATCTGG-CACAGATGCTAATACTGCACACCCAATGAGCGGCTGCTTC-TTCCTCACCCTTCCTCAGCCAGAGGACCTG-CACAGAGCTTTCTTCTAGATTTGTTCTTTTGGAAGACAAGAAACCACCCTATGGAGAG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170306908 337 + 172585720 CA----------------------------------TTCTGCACAAGGTGAAAAGGGCAGATTGAATCACTGAAGCCACTCAGGAGCCTTTTGTCTGGGAAAAA-ACAAAATCGGTCTGTTCAGTAGACTGACACTCGATAGT----CTAGAGACAAAATGTGTCTGCAGCTCTGGTATTCTGCCTGAGTTCCTCACACAGGACGTCCCAATTAATGTTGCTGATTGACTGATCA-AAA-AACCATCTGG-CACAGATGCTGATACCGCAGACCCCATGGGTGGCTGCTTC-TTCCCCACCCTTCCTCAGCCAAAGGACCTG-CACAGAGCTTTCTTCTAGATTTGTTCTTTCGGAAGATGAGAAGCCACCCTATGGAGAG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169052745 337 - 170955103 CA----------------------------------TTCTGCACAAGGTGAAAAGGGCAGATTGAATCACTGAAGCCACTCAGGAGCCTTTTGTCTGGGAAAAA-ACAAAATCGGTCTGTTCAGTAGACTGACACTCGATAGT----CTAGAGAGAAAATGTGTCTGCAGCTCTGGTATTCTGCCTGAGTTCCTCACACAGGACGTCCCAATTAATGTTGCTGATTGACTGATCA-AAA-AACCATCTGG-CACAGATGCTGATACCGCAGACCCGATGGGTGGCTGCTTC-TTCCCCACCCTTCCTCAGCCAAAGGACCTG-CACAGAGCTTTCTTCTAGATTTGTTCTTTCGGAAGATGAGAAGCCACCCTATGGAGAG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8339444 337 + 10161646 CA----------------------------------TTCTGCACAAGGTGAAAAGGGCAGATTGAATCACTGAAGCCACTCAGGAGCCTTTTGTCTGGGAAAAA-ACAAAATCGGTCTGTTCAGTAGACTGACACTCGATAGT----CTAGAGACAAAATGTGTCTGCAGCTCTGGTATTCTGCCTGAGTTCCTCACACAGGACGTCCCAATTAATGTTGCTGATTGACTGATCA-AAA-AACCATCTGG-CACAGATGCTGATACCGCAGACCCGATGGGTGGCTGCTTC-TTCCCCACCCTTCCTCAGCCAAAGGACCTG-CACAGAGCTTTCTTCTAGATTTGTTCTTTCGGAAGATGAGAAGCCACCCTATGGAGAG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1369980 337 + 3144229 CA----------------------------------TTCTGCACAAGGTGAAAAAGGCAGATTGAATCTCTGAAGCCACTCAGGAGCCTTTTGTCTGGGAAAAA-ACAAAATCGGTCTGTTCAGTAGACTGACACTCGATAGT----CTAGAGAGAAAATGTGTCTGCAGCTCTGGTATTCTGCTTGAGTTCCTCACACAGGACGTCCCAATTAATGTTGCTGATTGACTGATCA-AAA-AACCATCTGG-CACAGATGCTGATATCGCAGACCCGATGGGTGGCCGCTTC-TTCCCCACCCTTCCTCAGCCAAAGGACCTG-CACAGAGCTTTCTTCTAGATTTGTTCTTTCGGAAGATGAGAAGCCACCCTATGGAGAG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96648440 337 + 98384682 CA----------------------------------TTCTGCACAAGGTGAAAAGGGCAGATTGAATCACTGAAGCCACTTAGGAGCCTTTTGTCTGGGAAAAA-ACAAAATCGGTCTGTTCAGTAGACTGACACTCGATAGT----CTAGAGAGAAAATGTGTCTGCAGCTGTGGTATTCTGCTTGAGTTCCTCACACAGGATGTCCCAATTAATGTTGCTGATTGACTGATCA-AAA-AACCATCTGG-CATAGATGCTGATACCGCAGACCCAATGGGTGGCTGCTTC-TTCCCCACCCTTCCTCAGCCAAAGGACCTG-CACAGAGCTTTCTTCTAGATTTGTTCCTTCAGAAGATGAGAAACCACCCTATGGAGAG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8193210 337 - 10857215 CA----------------------------------TTCTGCACAAGGTGAAAAAGGCAGATTGAATCACTGAAGCCACTCAGGAGCCTTTTGTCTAGGAAAAA-ACAAAATCGGTCTGTTCAGTAGACTGACACTCGATAGT----CTAGAGAGAAAATGTGTCTGCAGCTCTGGTATTCTGCTTGAGTTCCTCACACAGGACGTCCCAATTAATGTTGCTGATTGACTGATCA-AAA-AACCATCTGG-CACAGATGCTGATATCGCAGACCCAATGGGTGGCCGCTTC-TTCCCCACCCTTCCTCAGCCAAAGGACCTG-CACAGAGCTTTCTTCTAGATTTGTTCTTTCGGAAGATGAGAAGCCACCCTATGGAGAG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15587334 341 - 23502949 CA----------------------------------TTCTGCACAAGGTGAAAAGGGCAGATTGAATCACTGAAGCCACTTAGGAGCCCTTTGTCTGGGAAAAA-ACAAAATCAGTCTATTCAGTAGACTGACACTCGATAGTCAGCCTAGAGAGAAAACGTGTCTGCAGCTCTGGTATTCTGCTTGAGTTCCTCACACAGGGCGTCCCAATTAATGTTGCTGATTGACTGATCA-AAA-AACCATCTGG-CACAGATGCTGATACCGCAGACCCGATGGGTGGCTGCTTC-TTCCCCACCCTTCCTCAGCCAAAGGACCTG-CACAGAGTTTTCTTCTAGATTTGTTCCTTCGGAAGATGGGAAACCACCCTGTGGAGAG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169856917 339 + 171630274 CA----------------------------------TTCTGCCCGAGATGAAAAGGGCAGGTGGAATCACTAGGGCCACTTAGGAGCC-TTTGTCTGGAAAAAA-ACACAATCAGTCTGTTCAGTAGACTGACACCTGATAGTCCGTCTCGAGAG-AAATGTGTCTGCAGCTGTGGTGTTCTGCTTGAGCTGCTCACACAGGGCTTCCCAATTAATGTTGCTGACTGACTGATCA-AAA-GACTCTCTGG-CACAGATGCTGATACCACAGACCTGCTGAGTGCCTGTTTC-TTCCCCGTCCTTCCTCAGCCAAATGACCTG-CATGGAGCTTACTTGCAGATTTGTTCTTTGGGAAGGCCAGAAACCACCCGATGGAGAA i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1270345 338 - 2905041 CA----------------------------------TTTTGCCCAAGGTGAAAAGGGCAGATGGAGTCACTGAGGCCACTTAGGAGCC-TTTGTCTGGAAAAAA-ACAAAATCAGGCTGTTCAGTAGACTGACACACGATAGTCCGTCTCGAGAG-AAATGTGTCTGCAGCTGTGGTGTTCTGCTTGAGTT-CTCACACAGGACTTCCCAATTAATGTTGCTGATTGACTGATCC-AAA-GACTGTCTGG-CACAGATGCTGATACCGCAGACCTGCTGAGTGGCTGTTTC-TTCCCCGTCCTTCCTCAGCCAAATGACCTG-CACGGAGCTTACTTCTAGATTTGTTATTTGAGAAGACCAGAAACCACCTGATGGAGAA i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1227420 339 - 2164891 CA----------------------------------TTCCGCCCAAGGTGAAAAGGGCAGATGGAATCACTGAGGCCACTTAGGAGCC-TTTGTCTGGAAAAAA-GCAAAATCAGTCTGTTCAGTAGACTGACACTTGATAGTCCGTCTCGGGAG-AAATGTGTCTGCAGCTGTGGTGTTCTGCTTGAGTTCCTCGCACAGGGCTTCCCCATTAATGTTGCTGATTGACTGATCA-AAA-GACTGTCTGG-CATAGATGCTGATACCACAGACCTGGTGAGTGGCTGTTTC-TTCCCTGTCCTTCCTCAGCCAAATGACCTG-CACGGAACTTACTTCTAGATTTGTTCTTCGAGAAGACCAGAAACCACCCGATGGAGAA i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1481314 333 - 1813869 CA----------------------------------TTCTGCCCAAGGTGAAAAGGGCAGATGGCATCAC--AGGCCAGTTAGGAGCC-TTTGTCT-GAAAAAA-ACAAAATCAGTTTGTTCAGTAGACTGACACTTGATAGTCCGTCTCGAGAG-AAGTGTGTCTGCAGCT---GTGTTCTGCTTGAGTTCCTCGCACAGGGCTTCCCAATTAATGTTGCTGATTGACTGATCA-AAA-GACTGTCTGG-CACAGATGCTGATACCACAGACCTGCTGAGTGGCTGTTTC-TTCCCCGTCCTTCCTCAGCCAAATGACCTG-CACGGAGCTTACTTCTGGATTTGTTCTTTGAGAAGACCAGAAACCACCCGATGGAGAA i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10932105 337 - 12073884 CAGGAAGCACGGCGTCTGGGACATGGTCCTCCTCCTCTATGCACCAGAGGAGACCAGCAGATTGAATCCCTGAAGCTAGTTAGGAGAATTTTTCCTGGGAAAAACGTTAAGTCAGGCTGTTCAGTAGCCTGTCACTTGATAGTTCC-ATGAACAGAAAATGTGTCTG--------------TGGTTGAGTGCTCCAT-------------GTGAGTGTCGTTGACTGACGGGCCAGAAA-GACTGCCTGG--ACAGGGGTGCGCACTGCAGGCCCT-----TGGCTGC-CC-ATGCCCGCCCCTCCTCTG---AGCTACCTG-CATAGA-CCTCCTTCCAGGTTTG-TCTCTGGGGAGACTAGAAACCACTGTATTGAGAA i otoGar3.GL873575 C 0 C 0 s dasNov3.JH569188 536565 344 + 760995 CA----------------------------------TGTTACAGAAGGTGCAAAAAGCATATTGATTCACTGAAACAATTTAGGAGTTTTTGATCTTGGAATAA-ATAAAATTGGTCTCTTCAGTAGTCTGACATTTGATAGCTAGTCTGGAGAGATAAAATAACTGCAGCTGTGGCATTCTGCATGACTACTGGGAGAAGGGTTTCCCAATAAATGTTGTTGACTGATGAGTTA-AAAGAACCATCGAAATGCAGATGCTGATATCGTAGACTCAACTATTGGCTTCTTTGTTTCCCATCCTTCCTCAGTTGAGCTGCCAGTCAAAGACCTTTCTTCTGTAATTGTTCTATCAGGAGTCCA-AAACCATCGTATGGAGAG i dasNov3.JH569188 I 262 I 31 e canFam3.chr1 56154202 1010 + 122678785 I a score=121523.000000 s hg38.chr6_KB021644v2_alt 79804 18 + 185823 A-----------------------------TGTCTATCCGATCACTG s panTro5.chr6 1886387 18 - 175400573 A-----------------------------TGTCTATCCGATCACTG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171769734 18 + 173848474 A-----------------------------TGTCTATCCGATCACTG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11452075 18 - 12463322 A-----------------------------TGTCTATCCGATCACTG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156280932 18 + 157873769 A-----------------------------TGTCTATCCGATCACTG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170307245 18 + 172585720 A-----------------------------TGTCTATCCAATCATTG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169053082 18 - 170955103 A-----------------------------TGTCTATCCAATCATTG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8339781 18 + 10161646 A-----------------------------TGTCTATCCAATCATTG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1370317 18 + 3144229 A-----------------------------TGTCTATCCAATCATTG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96648777 18 + 98384682 A-----------------------------TGTCTATCCAATCATTG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8193547 18 - 10857215 A-----------------------------TGTCTATCCAATCATTG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15587675 18 - 23502949 A-----------------------------TTTCTATCCAATCATTG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169857256 17 + 171630274 ------------------------------TGTCTGTCTCATCACTG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1270683 47 - 2905041 TCACTGTGATTCTCCGTCTGTGAGTCTCTGTGTCTGTCTTATCACTG i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1227759 36 - 2164891 TCACTGTGATTCTCCGTCA-----------TGTCTGTCTTATCCCTG i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1481647 17 - 1813869 ------------------------------CGTCTGTGTTATCACTG i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10932442 18 - 12073884 A-----------------------------CTTACGTCTCGTAACTG i otoGar3.GL873575 C 0 C 0 e dasNov3.JH569188 536909 31 + 760995 I e canFam3.chr1 56154202 1010 + 122678785 I a score=2264400.000000 s hg38.chr6_KB021644v2_alt 79822 266 + 185823 CACATCgtattagtccattctcatg-ctgctataaggatatatctaagactgggtaatttataaataaaagaggtgtaattgactcacagtgcagcatggctggggaagcctcaggaaacttaacaatcacggcagaaggagaagcaaacacatccttcttcacatggcagcagcaag---gagaagggccaaagcactgagcaaaatgggag-aaagccccttataaaaccatcagatcttgtgagaactcactcactatcatgagaaca s panTro5.chr6 1886405 263 - 175400573 CACATCgtattagtccattctcatg-ctgctataaggatatatctaagactgggtaatttataaataaaagaggtgtaattgactcacagttcagcatggctggggaagcctcaggaaacttaacaatcacagcagaaggagaagcaaacacatc---cttcacgtggcagcagcaag---gagaagggctgaagcactgagcaaaatgggag-aaagccccttataaaaccatcagatcttgtgagaactcactcactatcatgagaaca i panTro5.chr6 C 0 C 0 s panPan2.chr6 171769752 263 + 173848474 CACATCgtattagtccattctcatg-ctgctataaggatatatctaagactgggtaatttacaaataaaagaggtgtaattgactcacagttcagcatggctggggaagcctcaggaaacttaacaatcacagcagaaggagaagcaaacacatc---cttcacgtggcagcagcaag---gagaagggctgaagcactgagcaaaatgggag-aaagccccttataaaaccatcagatcttgtgaaaactcactcactatcatgagaaca i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11452093 263 - 12463322 CACATCgtattagtccattctcatg-ctgctataaggatatatctaagactgggtaatttataaataaaagaggtgtaattgactcacagttcagcatggctggggaagcctcaggaaacttaac-atcacggcagaaggagaagcaaacacatc-ttcttcacatggcagcagcaag---gagaagggccgaagcactgagcaaaacgggag-aaag-cccttataaaaccatcagatcttgtgagaactcactcactatcatgaggaca i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156280950 266 + 157873769 CACATCgtattagtcaattctcatg-ctgctataaggacatatctaagactgggtaatttataaatcaaagaggtgtaattgactcacagttcagcatggctggggcagcctcaggaaacttaacagtcacggcagaaggagaagcaaacatgtcctttttcacatggcagcagcaag---gagaagggctgaagcactgagcaaaacgggag-aaagccccttataaaaccatcagatcttgtgagaactcactcactgtcatgagaaca i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170307263 261 + 172585720 CACATtgtattagtccattttcatg-ctgctataaggatatatctaagactaggtaatttataaatgaaagaggtgtaattgactcacagctcagcatggctggggaagcctcaggaaactt-acaatcgtggcagaaggagaagcaaacacgtccttcttcacatg---gcagcaag---gagaaatgtcaaagcacagagcaaaa--gggggaaagccccttataaaaccatcggaacttgtgaggactcactcactctcatgagaaca i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169053100 261 - 170955103 CACATtgtattagtccattttcatg-ctgctataaggatatatctaagactaggtaatttataaatgaaagaggtgtaattgactcacagctcagcatggctggggaagcctcaggaaactt-acaatcgtggcagaaggagaagcaaacacgtccttcttcacatg---gcagcaag---gagaaatgtcaaagcacagagcaaaa--gggggaaagccccttataaaaccatcggaacttgtgaggactcactcactctcatgagaaca i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8339799 261 + 10161646 CACACtgtattagtccattttcatg-ctgctataaggatatatctaagactaggtaatttataaatgaaagaggtgtaattgactcacagctcagcatggctggggaagcctcaggaaactt-acaatcatggcagaaggagaagcaaacacgtccttcttcacatg---gcagcaag---gagaaatgtcaaagcacagagcaaaa--gggggaaagccccttataaaaccatcggaacttgtgaggactcactcactctcatgagaaca i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1370335 264 + 3144229 CACATtatattagtccattctcatatcttagataaggatatatctaagactgggtaatttataaatgaaagaggtgtaattgactcacagctcagcatggctggggaagcctcaggaaactt-acaatcgtggcagaaggagaagcaaacacgtccttcttcacatg---gcagcaag---gagaaatgtcaaagcacagagcaaaacgggggaaaagcctcttataaaaccatcggaacttgtgaggactcactcactctcatgagaaca i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96648795 262 + 98384682 CACATtgtattagtccattctcatg-ctgctataacgatatatctaagactgggtaatttataaatgaaagaggtgtaattgactcacagctcagcatggctggggaagcctcaggaaactt-acaatcgtggcagaaggagaagcaaacacgtccttcttcacatg---gcagcaag---gagaaatgtcgaaacgctgaccaaaacagggg-aaagccccttataaaaccatcggaacttgtgaggactcactcactctcatgagaaca i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8193565 264 - 10857215 CACATtatattagtccattctcatatcttagataaggatatatctaagactgggtaatttataaatgaaagaggtgtaattgactcacagctcagcatggctggggaagcctcaggaaactt-acaatcgtggcagaaggagaagcaaacacgtccttcttcacatg---gcagcaag---gagaaatgtcaaagcacagagcaaaacgggggaaaaacctcttataaaaccatcggaacttgtgaggactcactcactctcatgagaaca i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15587693 262 - 23502949 CACATtgtattagtccattctcatg-ctgctataaggatatatctaagactgggtaatttataaatgaaagagatgtaattgactcacagttcagcatggctggggaagcctcaggaaactt-acaatcatggcagaaggagaagtaaacacgtccttcttcacatg---gcagcaag---gagaaatgtcgaagcgctgagcaaaacagggg-aaagccccttataaaaccatcggaacttgtgaggactcactcactctcatgtgaaca i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169857273 255 + 171630274 CACACGgtatcagtccgttctcata-ctgctgtaagg----atctgagactgggtgattcataaacggaagaggtgtatttgagtctcaggtcagcagggctggggaagcctcgggaaactt-acagtcacggcagaaggagaagcaaacacgtccttcttcacatg---gcggctgc---gagaagtgccaaagtgctgtgcaaagcgggg---aagccccagataaagccgtcaggtctgagaagagctca-tcagtatcatgagcaca i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1270730 264 - 2905041 CACATGgtattagtccgttctcatg-ctgctataaggatatatctgagactgggtaatttataaatggaagaggtgtatttgactcgcagtccagcagggctggagaagcctcgggaaactt-ataatcatggcagaaggagaagcagacatgtccttcctcacatg---gcggccacaaggagacgtgcccacgtgctgagcagagtgggg--aaagccctggatgaagacatcagctctgataagaactcactcagtatcatgagaaca i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1227795 261 - 2164891 CACATGgtattggtccgttctcacg-ctgctataaggatatatctgagactgggtaatttataaatggaagaggtgtatttgactcgcagttcagcagggctggggaagcctcgggaaactt-acaatcatggcagaaggagaagcaaacatgtccttcttcacatg---gcagccgt---aagaagtgctgaagtgctgagccaagcgggg--aaagccccagataaagacatcaggtctggtaggaactcactcggtatcatgagaaca i cebCap1.NW_016107695v1 C 0 I 14 s aotNan1.NW_018494782v1 1481664 261 - 1813869 CACATGgtattagtctgttctcatg-ctgctataaggatatatctgagtctgggtaatttataaatggaagaggtgtatttgactcgcagttcagcagggctggggaagcctcgggaaactt-acgatcatggcagaaggggaagcaaacacgtccttcttcacatg---gcggccgc---cagaagtgccatagtgctgagcagatcgggg--aaagccccggataaagccatcgggtctgataagaactcactcagtatcatgagaaca i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10932460 0 - 12073884 C e dasNov3.JH569188 536909 31 + 760995 I e canFam3.chr1 56154202 1010 + 122678785 I a score=160769.000000 s hg38.chr6_KB021644v2_alt 80088 46 + 185823 gcatgagggtcaccattcccatgattaaatta---t-cccccccccacct s panTro5.chr6 1886668 47 - 175400573 gcatgagggtcaccacccccgtgattaaatta---tccccccccccacct i panTro5.chr6 C 0 C 0 s panPan2.chr6 171770015 46 + 173848474 gcatgagggtcaccacccccgtgattaaatta---t-cccccccccacct i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11452356 39 - 12463322 gcatgagggtcaccacccccatgattaaatta---t-cccccc------- i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156281216 45 + 157873769 gcataagggtcaccacccccatgattaaatta---t-cccccc-ccacct i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170307524 41 + 172585720 gcatgagggtcaccactcccgtgattaaatta---c-ccccac-----ct i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169053361 41 - 170955103 gcatgagggtcaccactcccgtgattaaatta---c-ccccac-----ct i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8340060 41 + 10161646 gcatgagggtcaccactcccgtgattaaatta---c-ccccac-----ct i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1370599 41 + 3144229 gcatgagggtcaccactcccgtgattaaatta---c-ccccac-----ct i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96649057 41 + 98384682 gcatgagggtcaccactcccgtgattaaatta---c-ccccac-----ct i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8193829 41 - 10857215 gcatgagggtcaccactcccgtgattaaatta---c-ccccac-----ct i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15587955 41 - 23502949 gcatgagggtcaccactcccatgattaaatta---c-ccccac-----ct i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169857528 32 + 171630274 tcctgagggtcactgcccccatgactcagtta------------------ i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1270994 14 - 2905041 t------------------cacgattcagtca------------------ i saiBol1.JH378287 C 0 C 0 s aotNan1.NW_018494782v1 1481925 15 - 1813869 ------------------tcatgat--gggcactg--------------- i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10932460 0 - 12073884 C e cebCap1.NW_016107695v1 1228056 14 - 2164891 I e dasNov3.JH569188 536909 31 + 760995 I e canFam3.chr1 56154202 1010 + 122678785 I a score=640271.000000 s hg38.chr6_KB021644v2_alt 80134 74 + 185823 tctccctcccacaacacatggggattatgggaactacaatt------------------------------------------------------------------caagatgagattcgggtggggacacagcaaaac s panTro5.chr6 1886715 74 - 175400573 tctccctcccacaacacatggggattatgggaactacaatt------------------------------------------------------------------caagatgagatttgggtggggacacagcaaaac i panTro5.chr6 C 0 C 0 s panPan2.chr6 171770061 74 + 173848474 tctccctcccacaacacatggggattatgggaactacaatt------------------------------------------------------------------caagatgagatttgggtggggacacagcaaaac i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11452395 71 - 12463322 ---cccccccacgacacatggggattatgggaactacaatt------------------------------------------------------------------caagatgagatttgggtggggacacagcaaaac i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156281261 74 + 157873769 tctccctcccacgacacatggggattatgggaactacaatt------------------------------------------------------------------caagatgagatttgggtggggacacagcgaaac i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170307565 72 + 172585720 cctccctcc--cgacacacggggattatgggaactacaatt------------------------------------------------------------------caagatgagatttgggtggggacacggccaaac i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169053402 72 - 170955103 cctccctcc--cgacacacggggattatgggaactacaatt------------------------------------------------------------------caagatgagatttgggtggggacacggccaaac i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8340101 72 + 10161646 cctccctcc--cgacacacggggattatgggaactacaatt------------------------------------------------------------------caagatgagatttgggtggggacacggccaaac i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1370640 72 + 3144229 cctccctcc--cgacacacggggattatgggaactacaatt------------------------------------------------------------------caagatgagatttgggtggggacacggccaaac i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96649098 72 + 98384682 cctccctcc--cgacacacggggattatgggaactacaatt------------------------------------------------------------------caagatgagatttgggtggggacacggccaaac i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8193870 72 - 10857215 cctccctcc--cgacacacggggattatgggaactacaatt------------------------------------------------------------------caagatgagatttgggtggggacacggccaaac i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15587996 138 - 23502949 cctccctcc--cgacacatggggattatgggaactacaattcaagatgagatttgggcagggacaAGATGAGATTTGGGTGGGGACAAGATGAGATTTGGGTGGGGCcaagatgagatttgggtggggacacggccaaac i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169857560 74 + 171630274 cctcccacccgagacacgtggagatgacgggaactacagtt------------------------------------------------------------------caagatgagattcgggtggggacacagccaaac i calJac3.chr4 C 0 I 428 s saiBol1.JH378287 1271008 74 - 2905041 cctccctcccgagacgcgtggagattacgggaactacagtt------------------------------------------------------------------cgagatgagatttgggtggggacacagccaaac i saiBol1.JH378287 C 0 I 2 s cebCap1.NW_016107695v1 1228070 74 - 2164891 cctgccacccgtgacacgtggaaatcacgggaactacagtt------------------------------------------------------------------caagatgagatttgggtggggaagcagcaaaac i cebCap1.NW_016107695v1 I 14 I 1 s aotNan1.NW_018494782v1 1481940 68 - 1813869 ------tcccgtgacacgtggagattatgggaactacagtt------------------------------------------------------------------caagacgagatttgggtggggacacaggccaac i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10932460 0 - 12073884 C e dasNov3.JH569188 536909 31 + 760995 I e canFam3.chr1 56154202 1010 + 122678785 I a score=43230.000000 s hg38.chr6_KB021644v2_alt 80208 7 + 185823 catatca s panTro5.chr6 1886789 7 - 175400573 catatca i panTro5.chr6 C 0 C 0 s panPan2.chr6 171770135 7 + 173848474 catatca i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11452466 7 - 12463322 catatca i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156281335 7 + 157873769 catatca i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170307637 7 + 172585720 catatca i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169053474 7 - 170955103 catatca i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8340173 7 + 10161646 catatca i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1370712 7 + 3144229 catatca i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96649170 7 + 98384682 catatca i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8193942 7 - 10857215 catatca i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15588134 7 - 23502949 catatca i colAng1.NW_012114488v1 C 0 C 0 e otoGar3.GL873575 10932460 0 - 12073884 C e saiBol1.JH378287 1271082 2 - 2905041 I e aotNan1.NW_018494782v1 1482008 0 - 1813869 C e cebCap1.NW_016107695v1 1228144 1 - 2164891 I e calJac3.chr4 169857634 428 + 171630274 I e dasNov3.JH569188 536909 31 + 760995 I e canFam3.chr1 56154202 1010 + 122678785 I a score=14599.000000 s hg38.chr6_KB021644v2_alt 80215 2 + 185823 CA s panTro5.chr6 1886796 2 - 175400573 CA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171770142 2 + 173848474 CA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11452473 2 - 12463322 CA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156281342 2 + 157873769 CA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170307644 2 + 172585720 CA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169053481 2 - 170955103 CA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8340180 2 + 10161646 CA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1370719 2 + 3144229 CA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96649177 2 + 98384682 CA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8193949 2 - 10857215 CA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15588141 2 - 23502949 CA i colAng1.NW_012114488v1 C 0 C 0 s aotNan1.NW_018494782v1 1482008 2 - 1813869 cT i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10932460 2 - 12073884 CA i otoGar3.GL873575 C 0 C 0 e saiBol1.JH378287 1271082 2 - 2905041 I e cebCap1.NW_016107695v1 1228144 1 - 2164891 I e calJac3.chr4 169857634 428 + 171630274 I e dasNov3.JH569188 536909 31 + 760995 I e canFam3.chr1 56154202 1010 + 122678785 I a score=36369.000000 s hg38.chr6_KB021644v2_alt 80217 4 + 185823 CATA s panTro5.chr6 1886798 4 - 175400573 CATA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171770144 4 + 173848474 CATA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11452475 4 - 12463322 CATA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156281344 4 + 157873769 CATA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170307646 4 + 172585720 CATA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169053483 4 - 170955103 CATA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8340182 4 + 10161646 CATA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1370721 4 + 3144229 CATA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96649179 4 + 98384682 CATA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8193951 4 - 10857215 CATA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15588143 4 - 23502949 CATA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169858062 4 + 171630274 CGTG i calJac3.chr4 I 428 C 0 s saiBol1.JH378287 1271084 4 - 2905041 CATG i saiBol1.JH378287 I 2 C 0 s aotNan1.NW_018494782v1 1482010 4 - 1813869 CATG i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10932462 4 - 12073884 CACA i otoGar3.GL873575 C 0 C 0 e cebCap1.NW_016107695v1 1228144 1 - 2164891 I e dasNov3.JH569188 536909 31 + 760995 I e canFam3.chr1 56154202 1010 + 122678785 I a score=48824.000000 s hg38.chr6_KB021644v2_alt 80221 6 + 185823 ATAGAA s panTro5.chr6 1886802 6 - 175400573 ATAGAA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171770148 6 + 173848474 ATAGAA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11452479 6 - 12463322 ATAGAA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156281348 6 + 157873769 ATAGAA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170307650 6 + 172585720 ATAAAA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169053487 6 - 170955103 ATAAAA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8340186 6 + 10161646 ATAAAA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1370725 6 + 3144229 ATAAAA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96649183 6 + 98384682 ATAGAA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8193955 6 - 10857215 ATAAAA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15588147 6 - 23502949 ATAGAA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169858066 6 + 171630274 GTAGGA i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1271088 6 - 2905041 TTAGGA i saiBol1.JH378287 C 0 C 0 s aotNan1.NW_018494782v1 1482014 6 - 1813869 ATAGGA i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10932466 6 - 12073884 GTGGAA i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56155212 6 + 122678785 ACGGGA i canFam3.chr1 I 1010 C 0 e cebCap1.NW_016107695v1 1228144 1 - 2164891 I e dasNov3.JH569188 536909 31 + 760995 I a score=1043130.000000 s hg38.chr6_KB021644v2_alt 80227 102 + 185823 AATATGTCTTAATTTACACTGGGACGTCTGTAGTGATTAAGTGTAGACACTT-------AACACTCACATATCACAGCAGCCAT--G---AAATCTCATTGCACTGCACTGGCA s panTro5.chr6 1886808 102 - 175400573 AATATGTCTTAATTTACACTGGGACGTCTGTAGTGATTAAGTGTAGACACTT-------AACACTCACACATCATAGCAGCCAT--G---AGATCTCATTGCACTGCACTGGCC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171770154 102 + 173848474 AATATGTCTTAATTTACACTGGGACGTCTGTAGTGATTAAGTGTAGACACTT-------AACACTCACACATCACAGCAGCCAT--G---AGATCTCATTGCACTGCACTGGCA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11452485 102 - 12463322 AATATGTCTTAATTTACACTGGGACGTCTGTAGTGATTAAGTGTAGACACTT-------AACACTCACACATCACAGCAGCCAT--G---AAATCTCACTGCACTGCACTGGCA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156281354 99 + 157873769 AATACGTCTTAATTTACACTGGGACGTCTGTAGTGATTGAGTGTAGACACTT-------AACACTCACACATCAT---AGCCAT--G---AAATCTCATCGCACTGCACTGGCA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170307656 102 + 172585720 AATATGTCTTAATTTACACTGGGGAGTCTGTAGTGATTAAGTGTAGACACTT-------AACACTCACACATCACAGCAGCCAT--G---GAATCCCACTGCCCTGCATTGGCA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169053493 102 - 170955103 AATATGTCTTAATTTACACTGGGGAGTCTGTAGTGATTAAGTGTAGACACTT-------AACACTCACACATCACAGCAGCCAT--G---GAATCCCACTGCCCTGCATTGGCA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8340192 102 + 10161646 AATATGTCTTAATTTACACTGGGGAGTCTGTAGTGATTAAGTGTAGACACTT-------AACACTCACACATCACAGCAGCCAT--G---GAATCCCACTGCCCTGCACTGGCA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1370731 102 + 3144229 AATATGTCTTAATTTACACTGGGGAGTCTGTAGTGATTAAGTGTAGACACTT-------AACACCCACACATCGCAGCAGCCAT--G---GAATCCCATTGCCCTGCACTGGCA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96649189 102 + 98384682 AACATGTCTTAATTTACACTGGGGAGTCTGCAGTGATTAAGTGTAGACACTT-------AACACTCACACATCACAGCAGCCAT--G---GAATCCCATTGCCCTGCACTGGCA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8193961 102 - 10857215 AATATGTCTTAATTTACACTGGGGAGTCTGTAGTGATTAAGTGTAGACACTT-------AACCCCCACACATCGCAGCAGCCAT--G---GAATCCCATTGCCCTGCACTGGCA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15588153 102 - 23502949 AATATGTCTTAGTTTACACTGGGAAGTCTGTAGTGATTAAGTGTAGACACTT-------AACACTCACACATCGCAGCAGCCAT--G---GAATCCCATTGCCCTGCACTGGCA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169858072 102 + 171630274 AGTATGTCTCAATTTACACTGGGAAGTCTGTAGTGACTAA-TGCAGACACTT-------AACACTCCCACGTCACAGCAGCCATGAG---AACTCTCATTGC-CCACACTGGCA i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1271094 98 - 2905041 AATATGTCTTAATTTACACTGGGAAGCCTGTAGTGATGAA-TGCAGACACTT-------AACA--CACACATCACAGCGGCCAT--G---AACTCTCATTGC-CTGCACTGGCA i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1228145 94 - 2164891 ------TCATGATTTATACCGAGAAGTCTGTAGTGTTTAA-TGCGGACACTT-------AACACTCACGCCTCACAGCAGCCGT--G---AGCTCTCATTGC-CTGCACTGGCA i cebCap1.NW_016107695v1 I 1 I 33 s aotNan1.NW_018494782v1 1482020 96 - 1813869 AATATGTCTTAATTTACACGGGGCAGTCTGTAGTGATTAA-TGCAGACACTT-------AACACTCA----TCACAGCAGCCAT--G---AACTCTCATTGC-CTGCACCGGCA i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10932472 98 - 12073884 AATATGCCTTAATTTACACT---AAGTCCACAGTGATTAAATGCAGACAGGT--------GTACTCGTACATGACAGCCGTCCT--G---AAATTCCACTGCACTGCGCTGGCA i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56155218 95 + 122678785 Agtctgtctc-cttcacactg---agtccatggtggttcagcacagacacgg-------g-----caattatagtaggagctct--ggtaaGATCCCATCGC-CTGCACTGGGA i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 536940 112 + 760995 AACATGGTTTGATTCACACTAAGAAGTCAGTAGCAGTTAAGTGTAGACATGTCTCTATAAATAAGCATAAAGGAGAGTAGCCAT--GGTAAAATTCCATGGTACTGTGCTTGAA i dasNov3.JH569188 I 31 C 0 a score=265088.000000 s hg38.chr6_KB021644v2_alt 80329 37 + 185823 TTCACGGCGCCCTCA--------TCATGTGCACATTTACCTAGGA s panTro5.chr6 1886910 37 - 175400573 TTCACGGCGCCCTCA--------TCATGTGCACGTTTACCTAGGA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171770256 37 + 173848474 TTCACGGCGCCCTCA--------TCATGTGCACGTTTACCTAGGA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11452587 37 - 12463322 TTCACGGCGCCCTCA--------TCATGTGCACGTTTACCTAGGA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156281453 37 + 157873769 TTAACGGAGCCCTCA--------TCATGTGCACATTTACCTAGGA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170307758 37 + 172585720 TTAATGGAGCCCTCA--------TCATGTGCACGTTTACCTAGGA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169053595 37 - 170955103 TTAACGGAGCCCTCA--------TCATGTGCACGTTTACCTAGGA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8340294 37 + 10161646 TTAACGGAGCCCTCA--------TCATGTGCACGTTTACCTAGGA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1370833 37 + 3144229 TTAACGGAGCCCTCA--------TCATGTGCACGTTTACCTAGGA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96649291 37 + 98384682 TTAACGGAGCCCTCA--------TCATGTGCACGTTTACCTAGGA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8194063 37 - 10857215 TTAACGGAGCCCTCA--------TCATGTGCACGTTTACCTAGGA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15588255 37 - 23502949 TTAACGGAGCCGTCA--------TCATGTGCACGTTTACCTAGGA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169858174 33 + 171630274 ---CTGGGGCCCTCA--------CCAAGTGCACGTTTACATAGG- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1271192 33 - 2905041 ---CTGGGGACCTCA--------CCAAGTGCACGTTTGCGTAGG- i saiBol1.JH378287 C 0 C 0 s aotNan1.NW_018494782v1 1482116 33 - 1813869 ---CTGGGGCCCTCA--------CCAAGTGCACGTTTACGTTGG- i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10932570 36 - 12073884 -TCTGGGAGCCCGAC--------CCCCATGTGTGTTTACAGAGAA i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56155313 33 + 122678785 -CCACGGGGTCCCCA--------TCATGCATGTAGATGCACA--- i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 537052 39 + 760995 -TTAGGGTGTCCTTAAGATTTTCTCTCTTGATCATTTGTA----- i dasNov3.JH569188 C 0 C 0 e cebCap1.NW_016107695v1 1228239 33 - 2164891 I a score=4771975.000000 s hg38.chr6_KB021644v2_alt 80366 517 + 185823 GATGGCATTCACCTAGGAGATT-AAA-TTTAGACAATCATGTCCGCAAAGGGAATGCCAATCATTTGGATGTGAGAAGGTGGGTTTTGTGCTGGA-GAT--GTCCCTCC--------AGC----CTAATTTTT-AAAT-ACAATCTGACAGGAAATTCA-ATGTATAAGTCTACGTGTGAAGGTCTGGGGCAGATGAAG-CATACTTTCCTTTTCTTCAGTTCTCTGTAG-----------CTTCTCCTTCAGGCCCTGCTG------GGA-----GGGTGCAGCAGAG----TGAAAACTATTGGTGTCCTGTGAAGAGAGTGGGAAACTTTGTTTCAGGTCC----TTTA-----AGAAAGCACCAAGGATCCCCAGCTCTAGTTTCC-CTCCAACTCTAAAATTCTAAGTACGGACTT-TTTCGGAAGACAAAGACCAGACATTGGAAAA----------CAAAAGACGTTAGAGATG-----------AGGTGGGTAAAGACGTAATTGTTGT-----TTCTTATACTTGTTT---ACTGACAAATACGAAGT-AAACAGTTGGTAAGAGGTGATTTCTCTAGACCTCTGCAAATATGGGA s panTro5.chr6 1886947 517 - 175400573 GATGGCATTCACCTAGGAGATT-AAA-TTTAGACAATCATGTCCGCAAAGGGAATGCCAATCATCTGGATGTGAGAAGGTGGGTTTTGTGATGGA-GAT--GTCCCTCC--------AGC----CTAATTTTT-AAAT-ACAATTTGACAGGAAATTCA-ATGTATAAGTCTATGTGTGAGGGTCTGGGGCAGATGAAG-CATACTTTCTTTTTCTTCAGTTCTCTGTAG-----------CTTCTCCTTCAGGCCCTGCTG------GGA-----GGGTGCAGCAGAG----TGAAAATTATTGGTGTCCTGTGAAGAGAGTGGGAAACTTTGTTTCAGGTCC----TTTA-----AGAAAGCACCAAGGATCCCCAGCTCTAGTTTCC-CTCCAACTCTAAAATTCTAAGTACGGACTT-TTTCAGAAGACAAAGACCAGACATTGGAAAA----------CAAAAGACGATAGAGATG-----------AGGTGGGTAAAGACGTAATTGTTGT-----TTCTTATACTTGTTT---ACTGACAAATATGAAGT-AAACAGTTGGTAAGAGGTGATTTCTCTAGACCTCTGCAAATATGGGA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171770293 517 + 173848474 GATGGCATTCACCTAGGAGATT-AAA-TTTAGACAATCATGTCCGCAAAGGGAATGCCAATCATCTGGATGTGAGAAGGTGGGTTTTGTGATGGA-GAT--GTCCCTCC--------AGC----CTAATTTTT-AAAT-ACAATTTGACAGGAAATTCA-ATGTATAAGTCTATGTGTGAGGGTCTGGGGCAGATGAAG-CATACTTTCTTTTTCTTCAGTTCTCTGTAG-----------CTTCTCCTTCAGGCCCTGCTG------GGA-----GGGTGCAGCAGAG----TGAAAATTATTGGTGTCCTGTGAAGAGAGTGGGAAACTTTGTTTCAGGTCC----TTTA-----AGAAAGCACCAAGGATCCCCAGCTCTAGTTTCC-CTCCAACTCTAAAATTCTAAGTACGGACTT-TTTCAGAAGACAAAGACCAGACATTGGAAAA----------CAAAAGACGATAGAGATG-----------AGGTGGGTAAAGACGTAATTGTTGT-----TTCTTATACTTGTTT---ACTGACAAATATGAAGT-AAACAGTTGGTAAGAGGTGATTTCTCTAGACCTCTGCAAATATGGGA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11452624 517 - 12463322 GATGGCATTCACCTAGGAGATT-AAA-TTTAGACAATCATGTCTGCAAAGGGAATGCCAATCATTTGGATGTGAGAAGGTGGGTTTTGTGATGGA-GAT--GTCCCTCC--------AGC----CTAATTTTT-AAAT-ACAATTTGACAGGAAATTCA-ATGTGTAAGTCTATGTGTGAGGGTCTGGGGCAGATGAAG-CATACTTTGCTTTTCTTCAGTTCTCTGTAG-----------CTTCTCCTTCAGGCGCTGCTG------GGA-----GGGTGCAGCAGAG----TGAAAACTATTGGTGTCCTGTGAAGAGAGTGGGAAAGTTTGTTTCAAGTCC----TTTA-----AGAAAGTGCCAAGGATCCCCAGCTCTAGTTTCC-CTCCAACTCTAAAATTCTAAGTACGGACTT-TTTCAGAAGACAAAGACCAGACATTGGAAAA----------CAAAAGACGTTAGAGATG-----------AGGTGGGTAAAGACGTAATTGTTGT-----TTCTTATACTTGTTT---ACTGACAAATGCAAAGT-AAACAGTTGGTAAGAGGTGATTTCTCTAGACCTCTGCAAATATGGGA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156281490 518 + 157873769 GATGGCTTTCACCTAGGAGATT-AAA-TTTAGACAATCATGTCTGCAAAGGGAATGCCAATCATTTGGATGTGAGAAGGTGGGTTTTGTGATGGA-GAT--GTCCTTCC--------AGC----CTAATTTTT-GAAT-ACAATTTGACAGGAAATTCA-ATGTATAAGTCCATGTGTGAGGGTCTGGGGCAGATGAAGCCACACTTTTCTTTTCTTCAGTTCTCTGTAG-----------CTTCTCCTTCAGGCCCTGCTG------GGA-----GGGTGCAGCAGAG----TGAAAACTATTGGTGTCCTGTGAAGAGAGTGGGAAACTTTGTTTCAGGTCC----TTTA-----AGAAAGCGCCAAGGATCCTCAGCTCTAGTTTCC-CTCCAACTCTAAAATTCTAAGTACAGACTT-TTTCAGAAGACAAAGACCAGGCGTTGGAAAA----------CAAAAGATGTTAGAGATG-----------AGGTGGGTAAAAAAGTAATTGTTGT-----TTCTTATACTTGTTT---ACTGACAAATACGAAGT-AAACAGTTGGTAAGAGGTGATTTCTCTAGACCTCTGCAAATATGGGA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170307795 494 + 172585720 GATGGCATTCACCTAGGAGATT-AAA--TTGGACGATCGTGTCCGCAAAGGGAATGCCAATTATTTGGATGTGAGAAGGTAGGTTTTGTGATGGAGGAT--GTCCCTCC--------AGC----CTAATTTTT-AAAT-ACAATTTGAAAGGAAATTCA-ATGTATAAGTCCACGTATGAGGTTCTGGGGCTGATGAAGCCATACATTACACTTCTTCAGTTCTCTGTAG-----------CTTCTCCCTCAGGCCCTGCTG------GGA-----GGGTGCATCAGAG----TGAAAACTATTGGTGTCCTGTGAAGAGAGTTGGAAACTTTGTTTCAGTTCC----TTTA-----AGAAAGCACCGAGGATCCTCACCTCTAGTTTCC-CTCCAACTCTAAAATTCTAAGTACAGACTT-TTTCGGAAGACAAAGACCAGAC----------------------------------ATG-----------AGGTGGGTAAAGACGCAATTGTCAT-----TTCTTATACTTGTTT---ACTGACAAACACGAAGT-AAATAGTGAGTAAGAGGTGATTTCTCTAGACCTCTGCAAATACGGGA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169053632 494 - 170955103 GATGGCATTCACCTAGGAGATT-AAA--TTGGACGATCGTGTCCGCAAAGGGAATGCCAATTATTTGGATGTGAGAAGGTAGGTTTTGTGATGGAGGAT--GTCCCTCC--------AGC----CTAATTTTT-AAAT-ACAATTTGAAAGGAAATTCA-ATGTATAAGTCCACGTATGAGGTTCTGGGGCTGATGAAGCCATACATTACACTTCTTCAGTTCTCTGTAG-----------CTTCTCCCTCAGGCCCTGCTG------GGA-----GGGTGCATCAGAG----TGAAAACTATTGGTGTCCTGTGAAGAGAGTTGGAAACTTTGTTTCAGTTCC----TTTA-----AGAAAGCACCGAGGATCCTCACCTCTAGTTTCC-CTCCAACTCTAAAATTCTAAGTACAGACTT-TTTCGGAAGACAAAGACCAGAC----------------------------------ATG-----------AGGTGGGTAAAGACGCAATTGTCAT-----TTCTTATACTTGTTT---ACTGACAAACACGAAGT-AAATAGTGAGTAAGAGGTGATTTCTCTAGACCTCTGCAAATACGGGA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8340331 493 + 10161646 GATGGCATTCACCTAGGAGATT-AAA--TTGGACGATCGTGTCCGCAAAGGGAATGCCAATTATTTGGATGTGAGAAGGTAGGTTTTGTGATGGAGGAT--GTCCCTCC--------AGC----CTAATTTTT-AAAT-ACAATTTGAAAGGAAATTCA-ATGTATAAGTCCACGTATGAGGTTCTGGGGCTGATGAAGCCATACATTACACTTCTTCAGTTCTCTGTAG-----------CTTCTCCCTCAGGCCCTGCTG------GGA-----GGGTGCATCAGAG----TGAAAACTATTGGTGTCCTGTGAAGAGAGTTGGAAACTTTGTTTCAGTTCC----TTTA-----AGAAAGCACCGAGGATCCTCACCTCTAGTTTCC-CTCCAACTCTAAAATTCTAAGTACAGACTT-TTTCGGAAGACAAAGACCAGAC----------------------------------ATG-----------AGGTGGGTAAAGACGCAATTGTCAT-----TTCTTATACTTGTTT---ACTGACAAACACGAAGT-AAATAGTGAG-AAGAGGTGATTTCTCTAGACCTCTGCAAATACGGGA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1370870 495 + 3144229 GATGGCATTCACTTAGGAGATT-AAA-TTTGGACAATCGTGTCCGCAAAGGGAATGCCAATTATTTGGATGTGAGAAGGTAGGTTTTGTGATGGAGGAT--GTCCCTCC--------AGC----CTAATTTTT-AAAT-ACAATTTGAAAGGAAATTCA-ATGTATAAGTCCACGTATGAGGTTCTGGGGCCGATGAAGCCTTACATTCCACTTCTTCAGTTCTCTGTAG-----------CTTCTCCCTCAGGCCCTGCTG------GGA-----GGGTGCATCAGAG----TGAAAACTATTGGTGTCCTGTGAAGAGAGTTGGAAACTTTGTTTCAGTTCC----TTTA-----AGAAAGCGCTGAGGATCCTCACCTCTAGTTTCC-CTCCAACTCTAAAATTCTAAGTACAGACTT-TTTCCGAAGACAAAGACCAGAC----------------------------------ATG-----------AGGTGGGTAAAGACGCAATTGTCAT-----TTCTTATACTTGTTT---ACTGACAAACACGAAGT-AAATAGTGAGTAAGAGGTGATTTCTCTAGACCTCTGCAAATACGGGA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96649328 491 + 98384682 GACGGCATTCACCGAGGAGATT-AAA-TTTGGACAATCGTGTCAGCAAAGGGAATGCCAATTATTTGGATATGAGAAGGTAGGTTTTGTGATGGAGGAT--GTCCCTCC--------AGC----CTAATTTTT-AAAT-ACAATTTGAAAGGAAATTCG-ATGTATAAGTCCATGTGTGAGGTTCTGGGGCCGATGAAGCCATACATTCCCTTTCTTCAGTTCTCCGTAG-----------CTTCTCCCTCAGGCCCTGCTG------GGA-----GGGTGCAGCAGAG----TGAAAACTATTGGTGTCCTGTGAAGAGAGCAGGAAATTTTGCTTCAGTTCC----TTTA-----AGAAAGCCCCGAGGATCCTCACCTCTAGTTTCC-TTTCAACTCTAAAATTCTAAGTACAGACTT-TTTCAGAAGACAAAGACCAGAC----------------------------------ATG-----------AGGTGGGTAAAGATGCAATTGTCAT-----TTCTTATACTTGTTT---ACTGACAAACACGAAGT-AAAC----AGTAAGAGGTGATTTCTCTAGACCTCTGCAAATACGCGA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8194100 495 - 10857215 GATGGCATTCACCTAGGAGATT-AAA-TTTGGACAATCGTGTCCGCAAAGGGAATGCCAATTATTTGGATGTGAGAAGGTAGGTTTTGTGATGGAGGAT--GTCCTTCC--------AGC----CTAATTTTT-AAAT-ACAATTTGAAAGGAAATTCA-ATGTATAAGTCCATGTATGAGGTTCTGGGGCCAATGAAGCCTTACATTCCACTTCTTCAGTTCTCTGTAG-----------CTTCTCCCTCAGGCCCTGCTG------GGA-----GGGTGCATCAGAG----TGAAAACTACTGGTGTCCTGTGAAGAGAGTTGGAAACTTTGTTTCAGTTCC----TTTA-----AGAAAGCTCCGAGGATCCTCACCTCTAGTTTCC-CTCCAACTCTAACATTCTAAGTACAGACTT-TTTCCGAAGACAAAGACCAGAC----------------------------------ATG-----------AGGTGGGTAAAGACGCAATTGTCAT-----TTCTTATACTTATTT---ACTGACAAACACGAAGT-AAATAGTGAGTAAGAGGTGATTTCTCTAGACCTCTGCAAATACGGGA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15588292 491 - 23502949 GATGGCATTCACCTAGGAGATT-AAA-TTTGGACAATCGTGTCTGCAAAGGGAATGCCAATTATTTGGATGTGAGAAGGTAGGTTTTGTGATGGAGGAT--GTCCCTCC--------AGC----CTAATTTTT-AAAT-ACAATTTGAAAGGAAATTCA-ATGTATAAGTCCATGTGTGAGGTTCTGGGGCCGATGAAGCCATATATTCCCTTTCTTCAGTTCTCTGTAG-----------CTTCTCCCTCAGGCCCTGCTA------GGA-----GGGTGCAGCAGAG----TGAAAACTACTGGTGTCCTGTGAAGAGAGTGGGAAACTTTCTTTCAGGTCC----TTTA-----AGAAAGCGCCAAGGATCCTCACCTCTAGTTTCC-CTCCAACTCTAAAATTCTAAGTACAGACTT-TTTCAAAAGACAAAGACCAAAC----------------------------------ATG-----------AGGTGGGTAAAGACGTAATTGTTAT-----TTCTTCTACTTGTTT---ACTGACAAACACGAAGT-AAAC----AGTAAGAGGTGATTTCTCTAGACCTCTGCAAATACGGGA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169858207 505 + 171630274 GGCGGCATTCCCCTA--AGAGT-ACA-TTTAGACAGTTGTGTCAGGAAAGGGAACACCGGTCATTTGGATGTGAGGA-GTGGGTTATGTGATGGAGGAT--GTCCCCCC--------AAC----CTAATTTTT-TAAT-GCAATTTGACAGGAAATTCA-ATGTGTAAGTCCACGTGTGAGGGTCTGGGGCAGACGAAGCCATGTTTTCAGTTTCCTCCGTTCTCTGTAG-----------C---TCCCCCAGGCCCTGCTG------GGA------GGTG-AGCAGAG----GGAAAACGATCAGTGTCTTGGCAAGGGAGGGGGAAACTTTGTTTCGAGTCC----TTTA-----AGAAAGCGTGGATGGT-CTCACCTCGAGTTTCC-CTCCAACTCTAAAATTCTAAGTACAGACTTGCTTCAGAAGACAAAGGCC-----TTGGAAAA----------CAAAAGAC-TTAGAGATG-----------AGGTGGGAGAAGGCGTCATTGTTAT-----TTATGATTCTTGTTT---ACGGGCAAACACGAAAT-AAACCATTGGTGAGAGGTGGTTTCTCCACACCTCTGAAGACAGGGGA i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1271225 504 - 2905041 GATGGCATTACCCCAGGAGAGT-AAA-CTTAGACGGCTGTGTCAGGAAAGGGAACGCCCGTCATTTGGATGTGAGGAGGTGGGTCACGTGATGCAGGAT--GT-CCCCC--------AGC----CTAATTTTT-AAAT-GCAATTTGACAGGAAATTCA-ATGTGTAAGTCCATGTGGGAGGGTCTGGGGCAGATGAAGCCATGTTTTCAGTTCCCTCCATTCTCTGTAG-----------CT--TCCCCCAAGCCCTGCCG------GGG------GGTG-AGCAGAG----GGAAAATGATCAGTGCCCTGGCAAGAGAGTGGGAAACTTTGTTTCAAGTCC----TTTA-----AGGAAGCGTGGATAGT-CTCACCTCTAGTTT-C-CTCCAACTCTAAAATTCTAAGTACAGACTTGCTTCAGAAGACAAAGGCC-----TTGGAA-------------GAAAGAC-TTAGAGATG-----------AGGTGGGAGAAGGTGTCATTGTTAT-----TTATTATACCTGTTT---ACGGGCAAACGCGAAAT-ACACCATTGGTAAGAGGTGATTTCTCTAGACCTCTGCAGACGTGGGA i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1228272 508 - 2164891 GATGGCACTCCCCTAGGAGAGT-AAA-TTTAGACCATTGTGTCAGGAAAGGGAATGCCAGTCGTTTGGTTGTGAGGAGGTGGGCTATGTGATGGAGGAT--GTCCCCCC--------AAC----CTAATTTTT-TAAT-GCAATTTGACAGGAAATTCA-ATGTGTAAGTCCATGTGTGAGGGTCTGGGGCAGATGAAGCCATGTTTTCAGTTTCCTGTGTTCTCTGTAG-----------CT--TCCCCCAGGCCCTGCTG------GGA------GGTG-AGCAGAG----GGAAAATGATCAGTGTCCTGGCAAGAGAGTGGGAGACTTTGTTTCAAGTCC----TTCA-----AGAAAGCGTGGATGGT-CTCACCTCTAGTTTCC-CTCCAACTCTAAAATTCTAAGTACAGACTTGCTTTGGAAGACAAAGGCC-----TTGGAAAA----------CAAAAAAC-TTAGAGCT------------AGGTGGGAGAAGGCGTCATTGTTAT-----TTATCATACTTGTTT---ATGGGCAAACACGAAAT-AAAGCCTTGGTAAGACATGATTTCTCTAGACCTCTGCAGACATGGGA i cebCap1.NW_016107695v1 I 33 C 0 s aotNan1.NW_018494782v1 1482149 508 - 1813869 -GACGCATTCCCCTAGGAGAGT-AAA-TTTAGACGATTGTGTCAGGAAAGGGAACGCCAGTCATCTGGATGTGGGGAGGTGGGTTATGTGATGGAGGAT--GTCACCCC--------AAC----CTCATTTTT-TAAT-GCAATTTGACAGGAAATTCA-ATGAGTAAGTCCTTGTGTGAGGGTCTGGGGCAGATGAAGCCATGTTTTCAGTTTCCTCCGTTCTCTGTAG-----------CT--TCCCCCAGGCCCTGCTA------GGA------GGTG-AGCAGAG----GGAAAACGGTCAGTGTCCTGGCAAGAGAGTGCGAAACTTTGTTTCTAGTCC----TTTA-----AGAAAGCGTGGATGGT-CTCACCTCTGGTTCCC-CTCCAACTCTAAAATTCTAAGTACAGACTCGCTTCGGAAGACAAAGGCC-----TTGGAAAA----------CAAAAGAC-TTAGAGATG-----------AGGTGGGAGAAGGCGTCATTGTTAT-----TTATCATACTTGTTT---ACGGGCAAACACGAAAT-AAACCGTTGGTGAGAGGTGATTTCGCTAGACCTCTGTAGACCTGGGA i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10932606 500 - 12073884 GGTAACACTTACCCAGGAGACT-AAAATTCAGACTGTCATGTCAGGAGAGGGAACATTACACATTTGGATTTCAG-AGATCGATTACGTAATGGTGCAT--TTTTGTGC--------AGTGGAGTTAACTTCG-TA-----AATTTTACAGGAAAATCA-GTATGTAAATCCTGGTG---GGGGCTGTGGCAGGTGGAAGCACAC-TTGAGTTTTCTCTGTTCTCTGAGG-----------CTTCTCATCCTGGTAC--------------------GTTG-------------------------TGTCCTGCACAGAGTGTTGGGTACCTGACTTCTAGGGC----TTTATTT--AAAAAAGGTTGATTATCATTACCCCTAGTTTCC-CTCGGAGCCTAAAA-TCCAAGCACAGACTT-ACTCTGAAGACAAAAACCAAACTTTGTCAAACAAAATAAACCAAAAGAAGTTGGAGACA-----------AAGTGGCTGAAGGCTTAACTTTCAT-----TTCTTGTACTTCCTTTAAACTGACAGACACAATGT-AAATATTTGGTAAGAAGTGATTTCCCCAGACCTCAGCAAACGTGGGA i otoGar3.GL873575 C 0 I 114 s canFam3.chr1 56155346 545 + 122678785 CATAGCATCTACCCGGGGCACTCAAA-GTTAGGATGTCCTGTCCAGAAAAGGAATGTCCTCCATTTGGATTTGGGAAGTTG---TTAGTGCGGGGTGCTGGGTTCCTCT-----GTGGGA----CTCATTTTT-GAATGGGGATTTTACAGAAAATTTATGCATATATATGGGCTTGGGGGGGTGTGTGGCCCATGAACCCACACTTCTGGCTTCCTCTCCTCTCAGTGGAGGGCCCTGGCCTCCTTCCTGGAAGCTTGTGGTACAGTGAA-----GATCGTGGTACAG----GGAAAACCAGAGAAACCCTTTAAAGTGTGATGGACACTCAGTTTCCGGTCCCGTATTTA-----GGAAGAGTTCAATGGTCACTGCCTCTACTTCCC-CTCCAGCTCCAA-ATCCTATGTCCAAACCT--TTCAGAAGACAAAGACCAGAAAC-----------------CAAAGACCCTGAGAGGTG-----------GTGGGGATGGCGGTGTGGTGGTGGTTGCGGTCCCTAGACTTTGTTTAAATGGACAGATATGGAGTGAAACGCTGAGTAAGACATGGTCTCCCTGGGCCTCTGCACAGGCAGGA i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 537091 539 + 760995 TCTAACACTTGTAGAGGAGAGTCAAG-TGTAGGGTACCTTGTCAGGGAAGGGAGTGGTACTCCTTGGGATTTGAGAAGGTAGATTG-GTGCAGGATGGT--GTGTTCCTTGTCAGTGAAA----CTAATTTTTCAAAT-GCCATTTTACAGGAAATTCA-ATTTATAAATCATAGTTCATGGGGAGATGGGAGATAAAGCCACATTCTTGGTTTTTTCCATTGTCTGTAT-----------CAACTCCTAGATATCTTTCTG------GTAACTCAGGACAGGGCAAAAAGTTTGAAAACTATTGGTATCCTATAA--------GGAAACTTTGTTTCTAGTCA----CTTATTTGCAGAAATC-TCAAGGGCCGTTATCTCTAATTTCCTTTCCAAGTCTAAAACTCCAAGCACAGACTT-TTTGCAAAGGTGAAGACCAAACTTTGGGAAA----------CAGAGGAAACTAAAAATGTTGGCGATGTCCTGGGGGTGAAGACTGCAATATCAT-----TTCTTCTAATTTATTTAAACTGACAAAAACAATGC-AAACATTTGGTCAGAATTGATCTCTCCAGACTTCTAGA--------- i dasNov3.JH569188 C 0 C 0 a score=250979.000000 s hg38.chr6_KB021644v2_alt 80883 23 + 185823 TTTCACATTTAACAATCTCCTGC------- s panTro5.chr6 1887464 23 - 175400573 TTTCACATTTAACAATCTCCCGC------- i panTro5.chr6 C 0 C 0 s panPan2.chr6 171770810 23 + 173848474 TTTCACATTTAACAATCTCCCGC------- i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11453141 23 - 12463322 TTTCACATTTAACAATCTCCTAC------- i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156282008 23 + 157873769 TTTCACATTTAACAATCTCTCAC------- i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170308289 23 + 172585720 TTTCACATTTAACAGTCTCCTGC------- i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169054126 23 - 170955103 TTTCACATTTAACAGTCTCCTGC------- i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8340824 23 + 10161646 TTTCACATTTAACAGTCTCCTGC------- i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1371365 23 + 3144229 TTTCACATTTAACAGTCTCCTGC------- i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96649819 23 + 98384682 TTTCACATTTAACAGTCTCCTGC------- i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8194595 23 - 10857215 TTTCACATTTAACAGTCTCCTGC------- i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15588783 23 - 23502949 TTTCACATTTAACAGTCTCCTGC------- i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169858712 23 + 171630274 TTTCACATTTAACAACCGCCCGT------- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1271729 23 - 2905041 TTTCACATTTAGCAATCTCCCGT------- i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1228780 23 - 2164891 TTTCACATTTAACGATCTCCCGC------- i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1482657 23 - 1813869 TTTCACATTTAACAATCTCCCGC------- i aotNan1.NW_018494782v1 C 0 C 0 s canFam3.chr1 56155891 23 + 122678785 TTTCACATTTAACCAGTCCCTGC------- i canFam3.chr1 C 0 I 445 s dasNov3.JH569188 537630 30 + 760995 TTTTACATGTAACAAACAACAGTCACATGT i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10933106 114 - 12073884 I a score=508125.000000 s hg38.chr6_KB021644v2_alt 80906 54 + 185823 GCTCTTCGTATTCATGCAGTCACCCGTC--AGCACATCTGCGCTGCTGGAAGAGCC s panTro5.chr6 1887487 54 - 175400573 ACTCTTCGTATTCATGCAGTCACCCCTC--AGCACATCTGCGCGGCTGGAAGAGCC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171770833 54 + 173848474 ACTCTTCGTATTCATGCAGTCACCCCTC--AGCACATCTGCGCGGCTGGAAGAGCC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11453164 54 - 12463322 GCTCTTCGTATTCATACAGTCACCCCTC--AGCCCATCTGCGCTGCTGGAAGAGCC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156282031 56 + 157873769 GCTGTTCGTATTCATGCAGTCAACCCTCTTAGCATATCTGCGCTGCTGGAAGAGCC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170308312 56 + 172585720 GCTCTTCATGTCCATGCAGTCAACCCCTTGAGCACATCTGCGCTGCTGGAAGAACC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169054149 56 - 170955103 GCTCTTCATGTCCATGCAGTCAACCCCTTGAGCACATCTGCGCTGCTGGAAGAACC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8340847 56 + 10161646 GCTCTTCATGTCCATGCAGTCAACCCCTTGAGCACATCTGCGCTGCTGGAAGAACC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1371388 56 + 3144229 GCTCTTCATGTCCATGCAGTCAACTCCATGAGCACATCTGCGCTGCTGGAAGAACC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96649842 56 + 98384682 GCTCTTCATGTCCATGCAGTCAACCCCGTGAGCACATCTGCGCTGCTGGAAGAACC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8194618 56 - 10857215 GCTCTTCATGTCCATGCAGTCAACTCCATGAGCACATCTGCGCTGCTGGAAGAACC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15588806 56 - 23502949 GCTCTTCATGTCCATGCAGTCAACCCTGTGAGCACATCTGCGCTGCTGGAAGAGCC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169858735 56 + 171630274 GCTCTTCATATTCATGCAGTTGACCCTGTTAGCACATCTGCGCTGCTGGAAGAGCC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1271752 56 - 2905041 GCTCTTCGTGTTCCTGCAGTTGACCCTGTTAGCACATCTGCGCTGCTGGAAGAGCC i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1228803 56 - 2164891 GCTCTTCATGTTCATGCAGTTGACCCTGTCAGCACGTCTGCGCTGCTGGAAGAGCC i cebCap1.NW_016107695v1 C 0 I 42 s aotNan1.NW_018494782v1 1482680 56 - 1813869 GCTCTTCATATTCATGCAGCTGACCCTGTTAGCACATCCGCGCTGCTGGAAGAGCC i aotNan1.NW_018494782v1 C 0 I 140 s dasNov3.JH569188 537660 55 + 760995 -CTTTCTATAGTAATAGAGTTAACTCTTGTGTTGCCTCTGCCTTGGTAGAAGATTC i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10933106 114 - 12073884 I e canFam3.chr1 56155914 445 + 122678785 I a score=22684.000000 s hg38.chr6_KB021644v2_alt 80960 4 + 185823 AAAG- s panTro5.chr6 1887541 4 - 175400573 AAAG- i panTro5.chr6 C 0 C 0 s panPan2.chr6 171770887 4 + 173848474 AAAG- i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11453218 4 - 12463322 AAAG- i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156282087 4 + 157873769 AAAG- i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170308368 4 + 172585720 GAAG- i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169054205 4 - 170955103 GAAG- i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8340903 4 + 10161646 GAAG- i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1371444 4 + 3144229 GAAG- i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96649898 4 + 98384682 GAAG- i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8194674 4 - 10857215 GAAG- i manLeu1.NW_012106474v1 C 0 I 16 s colAng1.NW_012114488v1 15588862 4 - 23502949 AAAG- i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169858791 4 + 171630274 GAGG- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1271808 4 - 2905041 GAGG- i saiBol1.JH378287 C 0 C 0 s dasNov3.JH569188 537715 4 + 760995 -AAGA i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10933106 114 - 12073884 I e aotNan1.NW_018494782v1 1482736 140 - 1813869 I e cebCap1.NW_016107695v1 1228859 42 - 2164891 I e canFam3.chr1 56155914 445 + 122678785 I a score=-166.000000 s hg38.chr6_KB021644v2_alt 80964 5 + 185823 CT----GAA s panTro5.chr6 1887545 5 - 175400573 CG----GAA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171770891 5 + 173848474 CG----GAA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11453222 5 - 12463322 CT----GAA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156282091 5 + 157873769 CT----AAA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170308372 5 + 172585720 AT----AAA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169054209 5 - 170955103 AT----AAA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8340907 5 + 10161646 AT----AAA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1371448 9 + 3144229 ATAAAAAAA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96649902 5 + 98384682 AT----AAA i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15588866 5 - 23502949 AT----AAA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169858795 6 + 171630274 --GTT-AGA i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1271812 7 - 2905041 --GTTGAAA i saiBol1.JH378287 C 0 C 0 s dasNov3.JH569188 537719 5 + 760995 AT----AAA i dasNov3.JH569188 C 0 I 2 e otoGar3.GL873575 10933106 114 - 12073884 I e aotNan1.NW_018494782v1 1482736 140 - 1813869 I e cebCap1.NW_016107695v1 1228859 42 - 2164891 I e canFam3.chr1 56155914 445 + 122678785 I e manLeu1.NW_012106474v1 8194678 16 - 10857215 I a score=24861.000000 s hg38.chr6_KB021644v2_alt 80969 4 + 185823 ACGC s panTro5.chr6 1887550 4 - 175400573 ACGC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171770896 4 + 173848474 ACGC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11453227 4 - 12463322 ACGC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156282096 4 + 157873769 ACGC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170308377 4 + 172585720 ACAC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169054214 4 - 170955103 ACAC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8340912 4 + 10161646 ACAC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1371457 4 + 3144229 ACAC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96649907 4 + 98384682 ACAC i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15588871 4 - 23502949 ACAC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169858801 4 + 171630274 ACGC i calJac3.chr4 C 0 I 1 s saiBol1.JH378287 1271819 4 - 2905041 ACGC i saiBol1.JH378287 C 0 C 0 e otoGar3.GL873575 10933106 114 - 12073884 I e aotNan1.NW_018494782v1 1482736 140 - 1813869 I e cebCap1.NW_016107695v1 1228859 42 - 2164891 I e dasNov3.JH569188 537724 2 + 760995 I e canFam3.chr1 56155914 445 + 122678785 I e manLeu1.NW_012106474v1 8194678 16 - 10857215 I a score=5989.000000 s hg38.chr6_KB021644v2_alt 80973 3 + 185823 ---CGG s panTro5.chr6 1887554 3 - 175400573 ---CGG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171770900 3 + 173848474 ---CGG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11453231 3 - 12463322 ---CGT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156282100 3 + 157873769 ---CGG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170308381 3 + 172585720 ---CAG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169054218 3 - 170955103 ---CAG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8340916 3 + 10161646 ---CAG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1371461 3 + 3144229 ---CAG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96649911 3 + 98384682 ---CAG i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15588875 3 - 23502949 ---CAG i colAng1.NW_012114488v1 C 0 C 0 s saiBol1.JH378287 1271823 5 - 2905041 AGCCG- i saiBol1.JH378287 C 0 C 0 e otoGar3.GL873575 10933106 114 - 12073884 I e aotNan1.NW_018494782v1 1482736 140 - 1813869 I e cebCap1.NW_016107695v1 1228859 42 - 2164891 I e calJac3.chr4 169858805 1 + 171630274 I e dasNov3.JH569188 537724 2 + 760995 I e canFam3.chr1 56155914 445 + 122678785 I e manLeu1.NW_012106474v1 8194678 16 - 10857215 I a score=18411.000000 s hg38.chr6_KB021644v2_alt 80976 5 + 185823 GTCTG s panTro5.chr6 1887557 5 - 175400573 GTCTG i panTro5.chr6 C 0 I 52 s panPan2.chr6 171770903 5 + 173848474 GTCTG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11453234 5 - 12463322 GTCTG i gorGor5.CYUI01015032v1 C 0 I 36 s rheMac8.chr4 170308384 5 + 172585720 GTCTA i rheMac8.chr4 C 0 C 0 s macNem1.NW_012011000v1 8340919 5 + 10161646 GTCTA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1371464 5 + 3144229 GTCTA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96649914 5 + 98384682 GTCTA i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15588878 5 - 23502949 GTCTA i colAng1.NW_012114488v1 C 0 C 0 s saiBol1.JH378287 1271828 5 - 2905041 GTCTA i saiBol1.JH378287 C 0 C 0 e otoGar3.GL873575 10933106 114 - 12073884 I e aotNan1.NW_018494782v1 1482736 140 - 1813869 I e cebCap1.NW_016107695v1 1228859 42 - 2164891 I e calJac3.chr4 169858805 1 + 171630274 I e dasNov3.JH569188 537724 2 + 760995 I e canFam3.chr1 56155914 445 + 122678785 I e nomLeu3.chr3 156282103 0 + 157873769 C e manLeu1.NW_012106474v1 8194678 16 - 10857215 I e macFas5.chr4 169054221 0 - 170955103 C a score=46697.000000 s hg38.chr6_KB021644v2_alt 80981 12 + 185823 CTGATGGTGCCG s panTro5.chr6 173534306 12 + 175400573 CTGATGGTGCGG i panTro5.chr6 I 23446 C 0 s panPan2.chr6 171770908 12 + 173848474 CTGATGGTGCCG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11453275 12 - 12463322 CTGATGGTGCGG i gorGor5.CYUI01015032v1 I 36 C 0 s rheMac8.chr4 170308389 12 + 172585720 CTGATGGTGCCG i rheMac8.chr4 C 0 C 0 s macNem1.NW_012011000v1 8340924 12 + 10161646 CTGATGGTGCCG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1371469 12 + 3144229 CTGATGGTGCCG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96649919 12 + 98384682 CTGATGGTGCCG i chlSab2.chr13 C 0 I 1 s colAng1.NW_012114488v1 15588883 12 - 23502949 CTGATGGTGCTG i colAng1.NW_012114488v1 C 0 C 0 s saiBol1.JH378287 1271833 12 - 2905041 CTGATGGTGCAG i saiBol1.JH378287 C 0 C 0 e otoGar3.GL873575 10933106 114 - 12073884 I e aotNan1.NW_018494782v1 1482736 140 - 1813869 I e cebCap1.NW_016107695v1 1228859 42 - 2164891 I e calJac3.chr4 169858805 1 + 171630274 I e dasNov3.JH569188 537724 2 + 760995 I e canFam3.chr1 56155914 445 + 122678785 I e nomLeu3.chr3 156282103 0 + 157873769 C e manLeu1.NW_012106474v1 8194678 16 - 10857215 I e macFas5.chr4 169054221 0 - 170955103 C a score=3600.000000 s hg38.chr6_KB021644v2_alt 80993 1 + 185823 G s panTro5.chr6 173534318 1 + 175400573 G i panTro5.chr6 C 0 C 0 s panPan2.chr6 171770920 1 + 173848474 G i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11453287 1 - 12463322 G i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170308401 1 + 172585720 G i rheMac8.chr4 C 0 C 0 s macNem1.NW_012011000v1 8340936 1 + 10161646 G i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1371481 1 + 3144229 G i cerAty1.NW_012002071v1 C 0 C 0 s colAng1.NW_012114488v1 15588895 1 - 23502949 G i colAng1.NW_012114488v1 C 0 C 0 s saiBol1.JH378287 1271845 1 - 2905041 G i saiBol1.JH378287 C 0 I 4 e otoGar3.GL873575 10933106 114 - 12073884 I e aotNan1.NW_018494782v1 1482736 140 - 1813869 I e cebCap1.NW_016107695v1 1228859 42 - 2164891 I e calJac3.chr4 169858805 1 + 171630274 I e dasNov3.JH569188 537724 2 + 760995 I e canFam3.chr1 56155914 445 + 122678785 I e chlSab2.chr13 96649931 1 + 98384682 I e nomLeu3.chr3 156282103 0 + 157873769 C e manLeu1.NW_012106474v1 8194678 16 - 10857215 I e macFas5.chr4 169054221 0 - 170955103 C a score=2800.000000 s hg38.chr6_KB021644v2_alt 80994 1 + 185823 G s panTro5.chr6 173534319 1 + 175400573 G i panTro5.chr6 C 0 C 0 s panPan2.chr6 171770921 1 + 173848474 G i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11453288 1 - 12463322 G i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170308402 1 + 172585720 G i rheMac8.chr4 C 0 C 0 s macNem1.NW_012011000v1 8340937 1 + 10161646 G i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1371482 1 + 3144229 G i cerAty1.NW_012002071v1 C 0 C 0 s colAng1.NW_012114488v1 15588896 1 - 23502949 G i colAng1.NW_012114488v1 C 0 C 0 e otoGar3.GL873575 10933106 114 - 12073884 I e saiBol1.JH378287 1271846 4 - 2905041 I e aotNan1.NW_018494782v1 1482736 140 - 1813869 I e cebCap1.NW_016107695v1 1228859 42 - 2164891 I e calJac3.chr4 169858805 1 + 171630274 I e dasNov3.JH569188 537724 2 + 760995 I e canFam3.chr1 56155914 445 + 122678785 I e chlSab2.chr13 96649931 1 + 98384682 I e nomLeu3.chr3 156282103 0 + 157873769 C e manLeu1.NW_012106474v1 8194678 16 - 10857215 I e macFas5.chr4 169054221 0 - 170955103 C a score=4871.000000 s hg38.chr6_KB021644v2_alt 80995 17 + 185823 GTCCGGC-TGTTTCTCTT s panTro5.chr6 173534320 15 + 175400573 GGCCGGC-TGTTTCT--T i panTro5.chr6 C 0 C 0 s panPan2.chr6 171770922 18 + 173848474 GTCCAGCTTGTTTCTGTT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11453289 17 - 12463322 GGCCGGC-TGTTTCTCTT i gorGor5.CYUI01015032v1 C 0 C 0 e otoGar3.GL873575 10933106 114 - 12073884 I e saiBol1.JH378287 1271846 4 - 2905041 I e aotNan1.NW_018494782v1 1482736 140 - 1813869 I e cebCap1.NW_016107695v1 1228859 42 - 2164891 I e calJac3.chr4 169858805 1 + 171630274 I e dasNov3.JH569188 537724 2 + 760995 I e colAng1.NW_012114488v1 15588897 0 - 23502949 C e canFam3.chr1 56155914 445 + 122678785 I e chlSab2.chr13 96649931 1 + 98384682 I e cerAty1.NW_012002071v1 1371483 0 + 3144229 C e nomLeu3.chr3 156282103 0 + 157873769 C e manLeu1.NW_012106474v1 8194678 16 - 10857215 I e macNem1.NW_012011000v1 8340938 0 + 10161646 C e rheMac8.chr4 170308403 0 + 172585720 C e macFas5.chr4 169054221 0 - 170955103 C a score=26824.000000 s hg38.chr6_KB021644v2_alt 81012 37 + 185823 GTCTACTGATGGTGCCGGGGGTCCGGCTGTTTCTCTT s panTro5.chr6 173534335 37 + 175400573 GTCTACTGATGTTGGGGGGGGTCCGGCTGTTTCTCTT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171770940 35 + 173848474 GTCTACTGATGGTGCTGGGGGCC--GCTGTTTCTGTT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11453306 37 - 12463322 GTCTACTGATGGTGCCGGGGGTCCAGCTGTTTCTCTT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156282103 37 + 157873769 GTCTACTGATGGTGCCAGGGGTCTGGCTGTTTCTGTT i nomLeu3.chr3 C 0 T 37 e otoGar3.GL873575 10933106 114 - 12073884 I e saiBol1.JH378287 1271846 4 - 2905041 I e aotNan1.NW_018494782v1 1482736 140 - 1813869 I e cebCap1.NW_016107695v1 1228859 42 - 2164891 I e calJac3.chr4 169858805 1 + 171630274 I e dasNov3.JH569188 537724 2 + 760995 I e colAng1.NW_012114488v1 15588897 0 - 23502949 C e canFam3.chr1 56155914 445 + 122678785 I e chlSab2.chr13 96649931 1 + 98384682 I e cerAty1.NW_012002071v1 1371483 0 + 3144229 C e manLeu1.NW_012106474v1 8194678 16 - 10857215 I e macNem1.NW_012011000v1 8340938 0 + 10161646 C e rheMac8.chr4 170308403 0 + 172585720 C e macFas5.chr4 169054221 0 - 170955103 C a score=21913.000000 s hg38.chr6_KB021644v2_alt 81049 25 + 185823 GTCTACTGATGGTGCCGGGGGTCCG s panTro5.chr6 173534372 25 + 175400573 GTCTACTGATGGTGCTGGGGGTCCG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171770975 25 + 173848474 GTCTACTGATGGTGCTGGGGGTCCG i panPan2.chr6 C 0 M 2202 s gorGor5.CYUI01015032v1 11453343 25 - 12463322 GTCTACTGATGGTGCCGGGGGTCCA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156282103 25 + 157873769 GTCTACTGATGGTGCCAGGGGTCTG i nomLeu3.chr3 T 37 C 0 e otoGar3.GL873575 10933106 114 - 12073884 I e saiBol1.JH378287 1271846 4 - 2905041 I e aotNan1.NW_018494782v1 1482736 140 - 1813869 I e cebCap1.NW_016107695v1 1228859 42 - 2164891 I e calJac3.chr4 169858805 1 + 171630274 I e dasNov3.JH569188 537724 2 + 760995 I e colAng1.NW_012114488v1 15588897 0 - 23502949 C e canFam3.chr1 56155914 445 + 122678785 I e chlSab2.chr13 96649931 1 + 98384682 I e cerAty1.NW_012002071v1 1371483 0 + 3144229 C e manLeu1.NW_012106474v1 8194678 16 - 10857215 I e macNem1.NW_012011000v1 8340938 0 + 10161646 C e rheMac8.chr4 170308403 0 + 172585720 C e macFas5.chr4 169054221 0 - 170955103 C a score=38587.000000 s hg38.chr6_KB021644v2_alt 81074 84 + 185823 GCTGTTTCTCTTGTCTACTGATGGTGCC------------------------------------------GGGGGTCCGGCTGTTTCTCTTGTCTACTGATGGTGCCGGGGGTCCGGCTGTTTCTG s panTro5.chr6 173534397 84 + 175400573 GCTGTTTCTCTTGCCTACTGATGGTGCC------------------------------------------GGGGGTCTGGCTGTGTCTCTTGTCTACTGATGGTGCCAGGGGTCTGGCTGTTTCTC i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11453368 126 - 12463322 GCTGTTTCTGTTGTCTACTGATGGTGCCGGGGGTCCGGCTGTTTCTTGTCTACTGATGGTGCGCAGGGTGGGGGGTCCGGCTGTTTCTCTTGTCTACTGATGGTGCCGGGGGTCCGGCTGTTTCTG i gorGor5.CYUI01015032v1 C 0 I 405 s nomLeu3.chr3 156282128 84 + 157873769 GCTGTTTCTGTTGTCTACTGATGGTGCC------------------------------------------AGGGGTCCGGCTGTTTCTGTTGTCTACTGATGGTGCCAGGGGTCCGGCTGTTTCTG i nomLeu3.chr3 C 0 C 0 e otoGar3.GL873575 10933106 114 - 12073884 I e saiBol1.JH378287 1271846 4 - 2905041 I e aotNan1.NW_018494782v1 1482736 140 - 1813869 I e cebCap1.NW_016107695v1 1228859 42 - 2164891 I e calJac3.chr4 169858805 1 + 171630274 I e dasNov3.JH569188 537724 2 + 760995 I e colAng1.NW_012114488v1 15588897 0 - 23502949 C e canFam3.chr1 56155914 445 + 122678785 I e chlSab2.chr13 96649931 1 + 98384682 I e cerAty1.NW_012002071v1 1371483 0 + 3144229 C e manLeu1.NW_012106474v1 8194678 16 - 10857215 I e macNem1.NW_012011000v1 8340938 0 + 10161646 C e rheMac8.chr4 170308403 0 + 172585720 C e macFas5.chr4 169054221 0 - 170955103 C e panPan2.chr6 171771000 2202 + 173848474 M a score=49191.000000 s hg38.chr6_KB021644v2_alt 81158 95 + 185823 TTGTCTACTGATGGTGCCGGGGGTCCGGCTGTTTCTGTTGTCTACTGATGGTGCCGGGGGTCCGGCTGTTTCTCTTGTCTACTGATGGTGCCGGG s panTro5.chr6 173534481 95 + 175400573 TTGTCTACTGATGGTGCTGGGGGTCCGGCTGTTTCTCTTGCCTACTGATGGTGCCGGGGGTCTGGCTGTGTCTCTTGTGTACTGATGGTGCCGGG i panTro5.chr6 C 0 T 74 s gorGor5.CYUI01015032v1 11453899 95 - 12463322 TTGTCTACTGATGGTGCCGGGGGTCCGGCTGTTTCTCTTGTCTACTGATGGTGCCGGGGGTCCGGCTGTTTCTCTTGTCTACTGATGGTGCCGGG i gorGor5.CYUI01015032v1 I 405 I 1 s nomLeu3.chr3 156282212 95 + 157873769 TTGTCTACTGATGGTGCCAGGGGTCCGGCTGTTTCTGTTGTGTACTGATGGTGCCAGGGGTCCGGCTGTTTCTGTTGTGTACTGATGGTGCCGGG i nomLeu3.chr3 C 0 C 0 e otoGar3.GL873575 10933106 114 - 12073884 I e saiBol1.JH378287 1271846 4 - 2905041 I e aotNan1.NW_018494782v1 1482736 140 - 1813869 I e cebCap1.NW_016107695v1 1228859 42 - 2164891 I e calJac3.chr4 169858805 1 + 171630274 I e dasNov3.JH569188 537724 2 + 760995 I e colAng1.NW_012114488v1 15588897 0 - 23502949 C e canFam3.chr1 56155914 445 + 122678785 I e chlSab2.chr13 96649931 1 + 98384682 I e cerAty1.NW_012002071v1 1371483 0 + 3144229 C e manLeu1.NW_012106474v1 8194678 16 - 10857215 I e macNem1.NW_012011000v1 8340938 0 + 10161646 C e rheMac8.chr4 170308403 0 + 172585720 C e macFas5.chr4 169054221 0 - 170955103 C e panPan2.chr6 171771000 2202 + 173848474 M a score=17649.000000 s hg38.chr6_KB021644v2_alt 81253 34 + 185823 GGTCCGGCTGTTTCTGTTGTCTACTGATGGTGCC s panTro5.chr6 173534502 34 + 175400573 GGTCCGGCTGTTTCTCTTGCCTACTGATGGTGCC i panTro5.chr6 T 74 C 0 s gorGor5.CYUI01015032v1 11453995 34 - 12463322 GGTCCGGCTGTTTCTCTTGTCTACTGATGGTGCC i gorGor5.CYUI01015032v1 I 1 C 0 s nomLeu3.chr3 156282307 34 + 157873769 GGTCCGGCTGTTTCTGTTGTGTACTGATGGTGCC i nomLeu3.chr3 C 0 C 0 e otoGar3.GL873575 10933106 114 - 12073884 I e saiBol1.JH378287 1271846 4 - 2905041 I e aotNan1.NW_018494782v1 1482736 140 - 1813869 I e cebCap1.NW_016107695v1 1228859 42 - 2164891 I e calJac3.chr4 169858805 1 + 171630274 I e dasNov3.JH569188 537724 2 + 760995 I e colAng1.NW_012114488v1 15588897 0 - 23502949 C e canFam3.chr1 56155914 445 + 122678785 I e chlSab2.chr13 96649931 1 + 98384682 I e cerAty1.NW_012002071v1 1371483 0 + 3144229 C e manLeu1.NW_012106474v1 8194678 16 - 10857215 I e macNem1.NW_012011000v1 8340938 0 + 10161646 C e rheMac8.chr4 170308403 0 + 172585720 C e macFas5.chr4 169054221 0 - 170955103 C e panPan2.chr6 171771000 2202 + 173848474 M a score=11772.000000 s hg38.chr6_KB021644v2_alt 81287 13 + 185823 GGGGGTCCGGCTG s panTro5.chr6 173534536 13 + 175400573 GGGGGTCTGGCTG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171773222 13 + 173848474 GGGGGTCCGGCTG i panPan2.chr6 M 2202 C 0 s gorGor5.CYUI01015032v1 11454029 13 - 12463322 GGGGGTCCGGCTG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156282341 13 + 157873769 AGGGGTCCGGCTG i nomLeu3.chr3 C 0 I 74 e otoGar3.GL873575 10933106 114 - 12073884 I e saiBol1.JH378287 1271846 4 - 2905041 I e aotNan1.NW_018494782v1 1482736 140 - 1813869 I e cebCap1.NW_016107695v1 1228859 42 - 2164891 I e calJac3.chr4 169858805 1 + 171630274 I e dasNov3.JH569188 537724 2 + 760995 I e colAng1.NW_012114488v1 15588897 0 - 23502949 C e canFam3.chr1 56155914 445 + 122678785 I e chlSab2.chr13 96649931 1 + 98384682 I e cerAty1.NW_012002071v1 1371483 0 + 3144229 C e manLeu1.NW_012106474v1 8194678 16 - 10857215 I e macNem1.NW_012011000v1 8340938 0 + 10161646 C e rheMac8.chr4 170308403 0 + 172585720 C e macFas5.chr4 169054221 0 - 170955103 C a score=29895.000000 s hg38.chr6_KB021644v2_alt 81300 45 + 185823 TTTCTCTTGTCTACTGATGGTGCC-GGGGTCCGGCTGTTTCTGTTG s panTro5.chr6 173534549 46 + 175400573 TGTCTCTTGTGTACTGATGGTGCCGGGGGTCTGGCTGTTTCTGTTG i panTro5.chr6 C 0 T 170 s panPan2.chr6 171773235 45 + 173848474 TTTCTCTTGCCTACTGATGGTGCC-GGGGTCTGGCTGTGTCTCTTG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11454042 44 - 12463322 TTTCTCTTGTCTACTGATGGTGCCGGGGGTCCGGCTGTTTCTTG-- i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156282428 46 + 157873769 TTTCTGTTGTGTACTGATGGTGCTGGGGGTCCGGCTGTTTCTGTCG i nomLeu3.chr3 I 74 C 0 e otoGar3.GL873575 10933106 114 - 12073884 I e saiBol1.JH378287 1271846 4 - 2905041 I e aotNan1.NW_018494782v1 1482736 140 - 1813869 I e cebCap1.NW_016107695v1 1228859 42 - 2164891 I e calJac3.chr4 169858805 1 + 171630274 I e dasNov3.JH569188 537724 2 + 760995 I e colAng1.NW_012114488v1 15588897 0 - 23502949 C e canFam3.chr1 56155914 445 + 122678785 I e chlSab2.chr13 96649931 1 + 98384682 I e cerAty1.NW_012002071v1 1371483 0 + 3144229 C e manLeu1.NW_012106474v1 8194678 16 - 10857215 I e macNem1.NW_012011000v1 8340938 0 + 10161646 C e rheMac8.chr4 170308403 0 + 172585720 C e macFas5.chr4 169054221 0 - 170955103 C a score=7812.000000 s hg38.chr6_KB021644v2_alt 81345 18 + 185823 TCTATTGATGGTGCCGGG s panPan2.chr6 171773280 18 + 173848474 TGTACTGATGGTGCCGGG i panPan2.chr6 C 0 T 73 s gorGor5.CYUI01015032v1 11454086 18 - 12463322 TCTACTGATGGTGCCGGG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156282474 18 + 157873769 TGTACTCATGGTGACGGG i nomLeu3.chr3 C 0 C 0 e otoGar3.GL873575 10933106 114 - 12073884 I e saiBol1.JH378287 1271846 4 - 2905041 I e aotNan1.NW_018494782v1 1482736 140 - 1813869 I e cebCap1.NW_016107695v1 1228859 42 - 2164891 I e calJac3.chr4 169858805 1 + 171630274 I e dasNov3.JH569188 537724 2 + 760995 I e colAng1.NW_012114488v1 15588897 0 - 23502949 C e canFam3.chr1 56155914 445 + 122678785 I e chlSab2.chr13 96649931 1 + 98384682 I e cerAty1.NW_012002071v1 1371483 0 + 3144229 C e manLeu1.NW_012106474v1 8194678 16 - 10857215 I e macNem1.NW_012011000v1 8340938 0 + 10161646 C e rheMac8.chr4 170308403 0 + 172585720 C e macFas5.chr4 169054221 0 - 170955103 C e panTro5.chr6 173534595 170 + 175400573 T a score=1746.000000 s hg38.chr6_KB021644v2_alt 81363 3 + 185823 GGT s panPan2.chr6 171773225 3 + 173848474 GGT i panPan2.chr6 T 73 C 0 s gorGor5.CYUI01015032v1 11454104 3 - 12463322 GGT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156282492 3 + 157873769 GGT i nomLeu3.chr3 C 0 C 0 e otoGar3.GL873575 10933106 114 - 12073884 I e saiBol1.JH378287 1271846 4 - 2905041 I e aotNan1.NW_018494782v1 1482736 140 - 1813869 I e cebCap1.NW_016107695v1 1228859 42 - 2164891 I e calJac3.chr4 169858805 1 + 171630274 I e dasNov3.JH569188 537724 2 + 760995 I e colAng1.NW_012114488v1 15588897 0 - 23502949 C e canFam3.chr1 56155914 445 + 122678785 I e chlSab2.chr13 96649931 1 + 98384682 I e cerAty1.NW_012002071v1 1371483 0 + 3144229 C e manLeu1.NW_012106474v1 8194678 16 - 10857215 I e macNem1.NW_012011000v1 8340938 0 + 10161646 C e rheMac8.chr4 170308403 0 + 172585720 C e macFas5.chr4 169054221 0 - 170955103 C e panTro5.chr6 173534595 170 + 175400573 T a score=14727.000000 s hg38.chr6_KB021644v2_alt 81366 19 + 185823 CCGGCTGTTTCTGTTGTCT s panTro5.chr6 1887614 19 - 175400573 CCGGCTGTTTCTGTTGTCT i panTro5.chr6 I 52 C 0 s panPan2.chr6 171773228 19 + 173848474 CCGGCTGTTTCTCTTGCCT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11454107 19 - 12463322 CCGGCTGTTTCTCTTGTCT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156282495 19 + 157873769 GCGGCTGTTTCTGTTGACT i nomLeu3.chr3 C 0 T 167 e otoGar3.GL873575 10933106 114 - 12073884 I e saiBol1.JH378287 1271846 4 - 2905041 I e aotNan1.NW_018494782v1 1482736 140 - 1813869 I e cebCap1.NW_016107695v1 1228859 42 - 2164891 I e calJac3.chr4 169858805 1 + 171630274 I e dasNov3.JH569188 537724 2 + 760995 I e colAng1.NW_012114488v1 15588897 0 - 23502949 C e canFam3.chr1 56155914 445 + 122678785 I e chlSab2.chr13 96649931 1 + 98384682 I e cerAty1.NW_012002071v1 1371483 0 + 3144229 C e manLeu1.NW_012106474v1 8194678 16 - 10857215 I e macNem1.NW_012011000v1 8340938 0 + 10161646 C e rheMac8.chr4 170308403 0 + 172585720 C e macFas5.chr4 169054221 0 - 170955103 C a score=7605.000000 s hg38.chr6_KB021644v2_alt 81385 17 + 185823 ACTGATGGTGCCGGGGG- s panTro5.chr6 1887633 17 - 175400573 ACTGATGGTGCTGGGGG- i panTro5.chr6 C 0 C 0 s panPan2.chr6 171773247 17 + 173848474 ACTGATGGTGCCGGGGT- i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11454126 18 - 12463322 ACTGATGGTGCCGGGGGT i gorGor5.CYUI01015032v1 C 0 C 0 e otoGar3.GL873575 10933106 114 - 12073884 I e saiBol1.JH378287 1271846 4 - 2905041 I e aotNan1.NW_018494782v1 1482736 140 - 1813869 I e cebCap1.NW_016107695v1 1228859 42 - 2164891 I e calJac3.chr4 169858805 1 + 171630274 I e dasNov3.JH569188 537724 2 + 760995 I e colAng1.NW_012114488v1 15588897 0 - 23502949 C e canFam3.chr1 56155914 445 + 122678785 I e chlSab2.chr13 96649931 1 + 98384682 I e cerAty1.NW_012002071v1 1371483 0 + 3144229 C e nomLeu3.chr3 156282514 167 + 157873769 T e manLeu1.NW_012106474v1 8194678 16 - 10857215 I e macNem1.NW_012011000v1 8340938 0 + 10161646 C e rheMac8.chr4 170308403 0 + 172585720 C e macFas5.chr4 169054221 0 - 170955103 C a score=39954.000000 s hg38.chr6_KB021644v2_alt 81402 49 + 185823 CCAGCTGTTTCTCTTGTCTACTGATGGTGCCGGGGGTCCGGCTGTTTCT s panTro5.chr6 1887650 47 - 175400573 CCGGCTGTTTCTCTTGTCTACTGATGGTGCCGGGGGTCCGGCTGTT--T i panTro5.chr6 C 0 C 0 s panPan2.chr6 171773264 49 + 173848474 CTGGCTGTGTCTCTTGTGTACTGATGGTGCCGGGGGTCTGGCTGTTTCT i panPan2.chr6 C 0 T 91 s gorGor5.CYUI01015032v1 11454144 49 - 12463322 CCGGCTGTTTCTCTTGTCTACTGATGGTGCCGGGGGTCCGGCTGTTTCT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156282347 49 + 157873769 CCGGCTGTTTCTGTTGTGTACTGATGGTGCCGGGGGTCCGGCTGTTTCT i nomLeu3.chr3 T 167 C 0 e otoGar3.GL873575 10933106 114 - 12073884 I e saiBol1.JH378287 1271846 4 - 2905041 I e aotNan1.NW_018494782v1 1482736 140 - 1813869 I e cebCap1.NW_016107695v1 1228859 42 - 2164891 I e calJac3.chr4 169858805 1 + 171630274 I e dasNov3.JH569188 537724 2 + 760995 I e colAng1.NW_012114488v1 15588897 0 - 23502949 C e canFam3.chr1 56155914 445 + 122678785 I e chlSab2.chr13 96649931 1 + 98384682 I e cerAty1.NW_012002071v1 1371483 0 + 3144229 C e manLeu1.NW_012106474v1 8194678 16 - 10857215 I e macNem1.NW_012011000v1 8340938 0 + 10161646 C e rheMac8.chr4 170308403 0 + 172585720 C e macFas5.chr4 169054221 0 - 170955103 C a score=1017.000000 s hg38.chr6_KB021644v2_alt 81451 3 + 185823 CTT s panTro5.chr6 1887697 3 - 175400573 CTT i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11454193 3 - 12463322 CTT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156282396 3 + 157873769 GTT i nomLeu3.chr3 C 0 T 296 e otoGar3.GL873575 10933106 114 - 12073884 I e saiBol1.JH378287 1271846 4 - 2905041 I e aotNan1.NW_018494782v1 1482736 140 - 1813869 I e cebCap1.NW_016107695v1 1228859 42 - 2164891 I e calJac3.chr4 169858805 1 + 171630274 I e dasNov3.JH569188 537724 2 + 760995 I e colAng1.NW_012114488v1 15588897 0 - 23502949 C e canFam3.chr1 56155914 445 + 122678785 I e chlSab2.chr13 96649931 1 + 98384682 I e cerAty1.NW_012002071v1 1371483 0 + 3144229 C e manLeu1.NW_012106474v1 8194678 16 - 10857215 I e macNem1.NW_012011000v1 8340938 0 + 10161646 C e rheMac8.chr4 170308403 0 + 172585720 C e macFas5.chr4 169054221 0 - 170955103 C e panPan2.chr6 171773313 91 + 173848474 T a score=27159.000000 s hg38.chr6_KB021644v2_alt 81454 53 + 185823 GTCTACTGATGGTGCCGGGGGTCCGGCTGTTTCTCTTGTCTACTGATGGTGCC s panTro5.chr6 1887700 53 - 175400573 GTCTACTGATGTTGGGGGGGGTCCGGCTGTTTCTCTTGTCTACTGATGGTGCC i panTro5.chr6 C 0 n 0 s gorGor5.CYUI01015032v1 11454196 53 - 12463322 GTCTACTGATGGTGCCGGGGGTCCGGCTGTTTCTCTTGTCTACTGATGGTGCC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156282103 53 + 157873769 GTCTACTGATGGTGCCAGGGGTCTGGCTGTTTCTGTTGTCTACTGATGGTGCC i nomLeu3.chr3 T 296 C 0 e otoGar3.GL873575 10933106 114 - 12073884 I e saiBol1.JH378287 1271846 4 - 2905041 I e aotNan1.NW_018494782v1 1482736 140 - 1813869 I e cebCap1.NW_016107695v1 1228859 42 - 2164891 I e calJac3.chr4 169858805 1 + 171630274 I e dasNov3.JH569188 537724 2 + 760995 I e colAng1.NW_012114488v1 15588897 0 - 23502949 C e canFam3.chr1 56155914 445 + 122678785 I e chlSab2.chr13 96649931 1 + 98384682 I e cerAty1.NW_012002071v1 1371483 0 + 3144229 C e manLeu1.NW_012106474v1 8194678 16 - 10857215 I e macNem1.NW_012011000v1 8340938 0 + 10161646 C e rheMac8.chr4 170308403 0 + 172585720 C e macFas5.chr4 169054221 0 - 170955103 C e panPan2.chr6 171773313 91 + 173848474 T a score=66203.000000 s hg38.chr6_KB021644v2_alt 81507 133 + 185823 GGGGGTCTGGCTGTTTCTGTTGTACTACTGATGGTGCCGGGGGTCCGGCTGTTTCTGTTGTCTACTGATGGTGCCGGGGGTCCGGCTGTTTCTCTTGTCTACTGATGGTGCCGGGGGTCCGGCTGTTTCTCTT s panTro5.chr6 173534425 132 + 175400573 GGGGGTCTGGCTGTGTCTCTTGT-CTACTGATGGTGCCAGGGGTCTGGCTGTTTCTCTTGTCTACTGATGGTGCTGGGGGTCCGGCTGTTTCTCTTGCCTACTGATGGTGCCGGGGGTCTGGCTGTGTCTCTT i panTro5.chr6 T 170 C 0 s gorGor5.CYUI01015032v1 11454249 132 - 12463322 GGGGGTCCGGCTGTTTCTCTTGT-CTACTGATGGTGCCGGGGGTCCGGCTGTTTCTCTTGTCTACTGATGGTGCCGGGGGTCCGGCTGTTTCTCTTGTCTACTGATGGTGCCGGGGGTCCGGCTGTTTCTCTT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156282156 132 + 157873769 AGGGGTCCGGCTGTTTCTGTTGT-CTACTGATGGTGCCAGGGGTCCGGCTGTTTCTGTTGTCTACTGATGGTGCCAGGGGTCCGGCTGTTTCTGTTGTGTACTGATGGTGCCAGGGGTCCGGCTGTTTCTGTT i nomLeu3.chr3 C 0 T 185 e otoGar3.GL873575 10933106 114 - 12073884 I e saiBol1.JH378287 1271846 4 - 2905041 I e aotNan1.NW_018494782v1 1482736 140 - 1813869 I e cebCap1.NW_016107695v1 1228859 42 - 2164891 I e calJac3.chr4 169858805 1 + 171630274 I e dasNov3.JH569188 537724 2 + 760995 I e colAng1.NW_012114488v1 15588897 0 - 23502949 C e canFam3.chr1 56155914 445 + 122678785 I e chlSab2.chr13 96649931 1 + 98384682 I e cerAty1.NW_012002071v1 1371483 0 + 3144229 C e manLeu1.NW_012106474v1 8194678 16 - 10857215 I e macNem1.NW_012011000v1 8340938 0 + 10161646 C e rheMac8.chr4 170308403 0 + 172585720 C e macFas5.chr4 169054221 0 - 170955103 C e panPan2.chr6 171773313 91 + 173848474 T a score=18436.000000 s hg38.chr6_KB021644v2_alt 81640 38 + 185823 GTCTACTGATGGTGCCGGGGGTCCGGCTGTTTCTGTTG s panTro5.chr6 173534557 38 + 175400573 GTGTACTGATGGTGCCGGGGGTCTGGCTGTTTCTGTTG i panTro5.chr6 C 0 T 111 s gorGor5.CYUI01015032v1 11454381 36 - 12463322 GTCTACTGATGGTGCCGGGGGTCCGGCTGTTTC--TTG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156282103 38 + 157873769 GTCTACTGATGGTGCCAGGGGTCTGGCTGTTTCTGTTG i nomLeu3.chr3 T 185 C 0 e otoGar3.GL873575 10933106 114 - 12073884 I e saiBol1.JH378287 1271846 4 - 2905041 I e aotNan1.NW_018494782v1 1482736 140 - 1813869 I e cebCap1.NW_016107695v1 1228859 42 - 2164891 I e calJac3.chr4 169858805 1 + 171630274 I e dasNov3.JH569188 537724 2 + 760995 I e colAng1.NW_012114488v1 15588897 0 - 23502949 C e canFam3.chr1 56155914 445 + 122678785 I e chlSab2.chr13 96649931 1 + 98384682 I e cerAty1.NW_012002071v1 1371483 0 + 3144229 C e manLeu1.NW_012106474v1 8194678 16 - 10857215 I e macNem1.NW_012011000v1 8340938 0 + 10161646 C e rheMac8.chr4 170308403 0 + 172585720 C e macFas5.chr4 169054221 0 - 170955103 C e panPan2.chr6 171773313 91 + 173848474 T a score=8229.000000 s hg38.chr6_KB021644v2_alt 81678 15 + 185823 TCTACTGATGGTGCC s panTro5.chr6 173534484 15 + 175400573 TCTACTGATGGTGCT i panTro5.chr6 T 111 C 0 s gorGor5.CYUI01015032v1 11454417 15 - 12463322 TCTACTGATGGTGCC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156282141 15 + 157873769 TCTACTGATGGTGCC i nomLeu3.chr3 C 0 C 0 e otoGar3.GL873575 10933106 114 - 12073884 I e saiBol1.JH378287 1271846 4 - 2905041 I e aotNan1.NW_018494782v1 1482736 140 - 1813869 I e cebCap1.NW_016107695v1 1228859 42 - 2164891 I e calJac3.chr4 169858805 1 + 171630274 I e dasNov3.JH569188 537724 2 + 760995 I e colAng1.NW_012114488v1 15588897 0 - 23502949 C e canFam3.chr1 56155914 445 + 122678785 I e chlSab2.chr13 96649931 1 + 98384682 I e cerAty1.NW_012002071v1 1371483 0 + 3144229 C e manLeu1.NW_012106474v1 8194678 16 - 10857215 I e macNem1.NW_012011000v1 8340938 0 + 10161646 C e rheMac8.chr4 170308403 0 + 172585720 C e macFas5.chr4 169054221 0 - 170955103 C e panPan2.chr6 171773313 91 + 173848474 T a score=12296.000000 s hg38.chr6_KB021644v2_alt 81693 13 + 185823 GGGGGTCCGGCTG s panTro5.chr6 173534499 13 + 175400573 GGGGGTCCGGCTG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171773222 13 + 173848474 GGGGGTCCGGCTG i panPan2.chr6 T 91 C 0 s gorGor5.CYUI01015032v1 11454432 13 - 12463322 GGGGGTCCGGCTG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156282156 13 + 157873769 AGGGGTCCGGCTG i nomLeu3.chr3 C 0 I 185 e otoGar3.GL873575 10933106 114 - 12073884 I e saiBol1.JH378287 1271846 4 - 2905041 I e aotNan1.NW_018494782v1 1482736 140 - 1813869 I e cebCap1.NW_016107695v1 1228859 42 - 2164891 I e calJac3.chr4 169858805 1 + 171630274 I e dasNov3.JH569188 537724 2 + 760995 I e colAng1.NW_012114488v1 15588897 0 - 23502949 C e canFam3.chr1 56155914 445 + 122678785 I e chlSab2.chr13 96649931 1 + 98384682 I e cerAty1.NW_012002071v1 1371483 0 + 3144229 C e manLeu1.NW_012106474v1 8194678 16 - 10857215 I e macNem1.NW_012011000v1 8340938 0 + 10161646 C e rheMac8.chr4 170308403 0 + 172585720 C e macFas5.chr4 169054221 0 - 170955103 C a score=21323.000000 s hg38.chr6_KB021644v2_alt 81706 29 + 185823 TTTCTGTTGTCTATTGATGGTGCCGGGGG s panTro5.chr6 173534512 29 + 175400573 TTTCTCTTGCCTACTGATGGTGCCGGGGG i panTro5.chr6 C 0 T 33 s panPan2.chr6 171773235 29 + 173848474 TTTCTCTTGCCTACTGATGGTGCCGGGGT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11454445 27 - 12463322 TTTC--TTGTCTACTGATGGTGCCGGGGG i gorGor5.CYUI01015032v1 C 0 I 1 s nomLeu3.chr3 156282354 29 + 157873769 TTTCTGTTGTGTACTGATGGTGCCGGGGG i nomLeu3.chr3 I 185 T 280 e otoGar3.GL873575 10933106 114 - 12073884 I e saiBol1.JH378287 1271846 4 - 2905041 I e aotNan1.NW_018494782v1 1482736 140 - 1813869 I e cebCap1.NW_016107695v1 1228859 42 - 2164891 I e calJac3.chr4 169858805 1 + 171630274 I e dasNov3.JH569188 537724 2 + 760995 I e colAng1.NW_012114488v1 15588897 0 - 23502949 C e canFam3.chr1 56155914 445 + 122678785 I e chlSab2.chr13 96649931 1 + 98384682 I e cerAty1.NW_012002071v1 1371483 0 + 3144229 C e manLeu1.NW_012106474v1 8194678 16 - 10857215 I e macNem1.NW_012011000v1 8340938 0 + 10161646 C e rheMac8.chr4 170308403 0 + 172585720 C e macFas5.chr4 169054221 0 - 170955103 C a score=367.000000 s hg38.chr6_KB021644v2_alt 81735 3 + 185823 CCA s panPan2.chr6 171773264 3 + 173848474 CTG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11454473 3 - 12463322 CCA i gorGor5.CYUI01015032v1 I 1 C 0 e otoGar3.GL873575 10933106 114 - 12073884 I e saiBol1.JH378287 1271846 4 - 2905041 I e aotNan1.NW_018494782v1 1482736 140 - 1813869 I e cebCap1.NW_016107695v1 1228859 42 - 2164891 I e calJac3.chr4 169858805 1 + 171630274 I e dasNov3.JH569188 537724 2 + 760995 I e colAng1.NW_012114488v1 15588897 0 - 23502949 C e canFam3.chr1 56155914 445 + 122678785 I e chlSab2.chr13 96649931 1 + 98384682 I e cerAty1.NW_012002071v1 1371483 0 + 3144229 C e nomLeu3.chr3 156282383 280 + 157873769 T e manLeu1.NW_012106474v1 8194678 16 - 10857215 I e macNem1.NW_012011000v1 8340938 0 + 10161646 C e rheMac8.chr4 170308403 0 + 172585720 C e macFas5.chr4 169054221 0 - 170955103 C e panTro5.chr6 173534541 33 + 175400573 T a score=5814.000000 s hg38.chr6_KB021644v2_alt 81738 12 + 185823 GCTGTTTCTCTT s panTro5.chr6 173534508 12 + 175400573 GCTGTTTCTCTT i panTro5.chr6 T 33 C 0 s panPan2.chr6 171773267 12 + 173848474 GCTGTGTCTCTT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11454476 12 - 12463322 GCTGTTTTTCTT i gorGor5.CYUI01015032v1 C 0 C 0 e otoGar3.GL873575 10933106 114 - 12073884 I e saiBol1.JH378287 1271846 4 - 2905041 I e aotNan1.NW_018494782v1 1482736 140 - 1813869 I e cebCap1.NW_016107695v1 1228859 42 - 2164891 I e calJac3.chr4 169858805 1 + 171630274 I e dasNov3.JH569188 537724 2 + 760995 I e colAng1.NW_012114488v1 15588897 0 - 23502949 C e canFam3.chr1 56155914 445 + 122678785 I e chlSab2.chr13 96649931 1 + 98384682 I e cerAty1.NW_012002071v1 1371483 0 + 3144229 C e nomLeu3.chr3 156282383 280 + 157873769 T e manLeu1.NW_012106474v1 8194678 16 - 10857215 I e macNem1.NW_012011000v1 8340938 0 + 10161646 C e rheMac8.chr4 170308403 0 + 172585720 C e macFas5.chr4 169054221 0 - 170955103 C a score=24800.000000 s hg38.chr6_KB021644v2_alt 81750 29 + 185823 GTCTACTGATGGTGCCGGGGGTCTGGCTC s panTro5.chr6 173534520 29 + 175400573 GCCTACTGATGGTGCCGGGGGTCTGGCTG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171773279 29 + 173848474 GTGTACTGATGGTGCCGGGGGTCTGGCTG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11454488 29 - 12463322 GTCTACTGATGGTGCCGGGGGTCCGGCTG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156282103 29 + 157873769 GTCTACTGATGGTGCCAGGGGTCTGGCTG i nomLeu3.chr3 T 280 I 37 e otoGar3.GL873575 10933106 114 - 12073884 I e saiBol1.JH378287 1271846 4 - 2905041 I e aotNan1.NW_018494782v1 1482736 140 - 1813869 I e cebCap1.NW_016107695v1 1228859 42 - 2164891 I e calJac3.chr4 169858805 1 + 171630274 I e dasNov3.JH569188 537724 2 + 760995 I e colAng1.NW_012114488v1 15588897 0 - 23502949 C e canFam3.chr1 56155914 445 + 122678785 I e chlSab2.chr13 96649931 1 + 98384682 I e cerAty1.NW_012002071v1 1371483 0 + 3144229 C e manLeu1.NW_012106474v1 8194678 16 - 10857215 I e macNem1.NW_012011000v1 8340938 0 + 10161646 C e rheMac8.chr4 170308403 0 + 172585720 C e macFas5.chr4 169054221 0 - 170955103 C a score=6290.000000 s hg38.chr6_KB021644v2_alt 81779 9 + 185823 TTTCTGTTG s panTro5.chr6 173534549 9 + 175400573 TGTCTCTTG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171773308 9 + 173848474 TTTCTGTTG i panPan2.chr6 C 0 T 95 s gorGor5.CYUI01015032v1 11454517 9 - 12463322 TTTCTCTTG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156282169 9 + 157873769 TTTCTGTTG i nomLeu3.chr3 I 37 C 0 e otoGar3.GL873575 10933106 114 - 12073884 I e saiBol1.JH378287 1271846 4 - 2905041 I e aotNan1.NW_018494782v1 1482736 140 - 1813869 I e cebCap1.NW_016107695v1 1228859 42 - 2164891 I e calJac3.chr4 169858805 1 + 171630274 I e dasNov3.JH569188 537724 2 + 760995 I e colAng1.NW_012114488v1 15588897 0 - 23502949 C e canFam3.chr1 56155914 445 + 122678785 I e chlSab2.chr13 96649931 1 + 98384682 I e cerAty1.NW_012002071v1 1371483 0 + 3144229 C e manLeu1.NW_012106474v1 8194678 16 - 10857215 I e macNem1.NW_012011000v1 8340938 0 + 10161646 C e rheMac8.chr4 170308403 0 + 172585720 C e macFas5.chr4 169054221 0 - 170955103 C a score=19254.000000 s hg38.chr6_KB021644v2_alt 81788 37 + 185823 TCTACTGATGGTGCCGGGGGTCCGGCTGTTTCTGTTG s panTro5.chr6 173534558 37 + 175400573 TGTACTGATGGTGCCGGGGGTCTGGCTGTTTCTGTTG i panTro5.chr6 C 0 T 148 s gorGor5.CYUI01015032v1 11454526 37 - 12463322 TCTACTGATGGTGCCGGGGGTCCGGCTGTTTCTCTTG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156282178 37 + 157873769 TCTACTGATGGTGCCAGGGGTCCGGCTGTTTCTGTTG i nomLeu3.chr3 C 0 C 0 e otoGar3.GL873575 10933106 114 - 12073884 I e saiBol1.JH378287 1271846 4 - 2905041 I e aotNan1.NW_018494782v1 1482736 140 - 1813869 I e cebCap1.NW_016107695v1 1228859 42 - 2164891 I e calJac3.chr4 169858805 1 + 171630274 I e dasNov3.JH569188 537724 2 + 760995 I e colAng1.NW_012114488v1 15588897 0 - 23502949 C e canFam3.chr1 56155914 445 + 122678785 I e chlSab2.chr13 96649931 1 + 98384682 I e cerAty1.NW_012002071v1 1371483 0 + 3144229 C e manLeu1.NW_012106474v1 8194678 16 - 10857215 I e macNem1.NW_012011000v1 8340938 0 + 10161646 C e rheMac8.chr4 170308403 0 + 172585720 C e macFas5.chr4 169054221 0 - 170955103 C e panPan2.chr6 171773317 95 + 173848474 T a score=45165.000000 s hg38.chr6_KB021644v2_alt 81825 89 + 185823 TCTACTGATGGTGCCGGGGGTCCGGCTGTTTCTGTTGTCTACTGATGGTGCTGGGGGTCCGGCTGTTTCTGTTGTCTACTGATGGTGCC s panTro5.chr6 173534447 89 + 175400573 TCTACTGATGGTGCCAGGGGTCTGGCTGTTTCTCTTGTCTACTGATGGTGCTGGGGGTCCGGCTGTTTCTCTTGCCTACTGATGGTGCC i panTro5.chr6 T 148 C 0 s gorGor5.CYUI01015032v1 11454563 89 - 12463322 TCTACTGATGATGCTGGGGGTCTGGCTGTTTCTGTTGTCTACTGATGGTGCCGGGGGTCTGGCTGTTTCTGTTGTCTACTGATGGTGCC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156282215 89 + 157873769 TCTACTGATGGTGCCAGGGGTCCGGCTGTTTCTGTTGTGTACTGATGGTGCCAGGGGTCCGGCTGTTTCTGTTGTGTACTGATGGTGCC i nomLeu3.chr3 C 0 C 0 e otoGar3.GL873575 10933106 114 - 12073884 I e saiBol1.JH378287 1271846 4 - 2905041 I e aotNan1.NW_018494782v1 1482736 140 - 1813869 I e cebCap1.NW_016107695v1 1228859 42 - 2164891 I e calJac3.chr4 169858805 1 + 171630274 I e dasNov3.JH569188 537724 2 + 760995 I e colAng1.NW_012114488v1 15588897 0 - 23502949 C e canFam3.chr1 56155914 445 + 122678785 I e chlSab2.chr13 96649931 1 + 98384682 I e cerAty1.NW_012002071v1 1371483 0 + 3144229 C e manLeu1.NW_012106474v1 8194678 16 - 10857215 I e macNem1.NW_012011000v1 8340938 0 + 10161646 C e rheMac8.chr4 170308403 0 + 172585720 C e macFas5.chr4 169054221 0 - 170955103 C e panPan2.chr6 171773317 95 + 173848474 T a score=27986.000000 s hg38.chr6_KB021644v2_alt 81914 37 + 185823 GGGGGTCCGGCTGTTTCTGTTGTCTACTGATGGTGCC s panTro5.chr6 173534536 37 + 175400573 GGGGGTCTGGCTGTGTCTCTTGTGTACTGATGGTGCC i panTro5.chr6 C 0 T 217 s panPan2.chr6 171773222 37 + 173848474 GGGGGTCCGGCTGTTTCTCTTGCCTACTGATGGTGCC i panPan2.chr6 T 95 C 0 s gorGor5.CYUI01015032v1 11454652 36 - 12463322 AAGGGTCCGGCTGTTTCTC-TGTCTACTGATGGTGCC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156282304 37 + 157873769 GGGGGTCCGGCTGTTTCTGTTGTGTACTGATGGTGCC i nomLeu3.chr3 C 0 I 1 e otoGar3.GL873575 10933106 114 - 12073884 I e saiBol1.JH378287 1271846 4 - 2905041 I e aotNan1.NW_018494782v1 1482736 140 - 1813869 I e cebCap1.NW_016107695v1 1228859 42 - 2164891 I e calJac3.chr4 169858805 1 + 171630274 I e dasNov3.JH569188 537724 2 + 760995 I e colAng1.NW_012114488v1 15588897 0 - 23502949 C e canFam3.chr1 56155914 445 + 122678785 I e chlSab2.chr13 96649931 1 + 98384682 I e cerAty1.NW_012002071v1 1371483 0 + 3144229 C e manLeu1.NW_012106474v1 8194678 16 - 10857215 I e macNem1.NW_012011000v1 8340938 0 + 10161646 C e rheMac8.chr4 170308403 0 + 172585720 C e macFas5.chr4 169054221 0 - 170955103 C a score=2400.000000 s hg38.chr6_KB021644v2_alt 81951 4 + 185823 GGGG s panPan2.chr6 171773259 4 + 173848474 GGGG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11454688 4 - 12463322 GGGG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156282342 4 + 157873769 GGGG i nomLeu3.chr3 I 1 C 0 e otoGar3.GL873575 10933106 114 - 12073884 I e saiBol1.JH378287 1271846 4 - 2905041 I e aotNan1.NW_018494782v1 1482736 140 - 1813869 I e cebCap1.NW_016107695v1 1228859 42 - 2164891 I e calJac3.chr4 169858805 1 + 171630274 I e dasNov3.JH569188 537724 2 + 760995 I e colAng1.NW_012114488v1 15588897 0 - 23502949 C e canFam3.chr1 56155914 445 + 122678785 I e chlSab2.chr13 96649931 1 + 98384682 I e cerAty1.NW_012002071v1 1371483 0 + 3144229 C e manLeu1.NW_012106474v1 8194678 16 - 10857215 I e macNem1.NW_012011000v1 8340938 0 + 10161646 C e rheMac8.chr4 170308403 0 + 172585720 C e macFas5.chr4 169054221 0 - 170955103 C e panTro5.chr6 173534573 217 + 175400573 T a score=45488.000000 s hg38.chr6_KB021644v2_alt 81955 54 + 185823 TCCGGCTGTTTCTGTTGTCTACTGATGGTGCCGGGGGTCCGGCTGTTTCTGTTG s panTro5.chr6 173534356 54 + 175400573 TCCGGCTGTTTCTCTTGTCTACTGATGGTGCTGGGGGTCCGGCTGTTTCTCTTG i panTro5.chr6 T 217 C 0 s panPan2.chr6 171773263 54 + 173848474 TCTGGCTGTGTCTCTTGTGTACTGATGGTGCCGGGGGTCTGGCTGTTTCTGTTG i panPan2.chr6 C 0 T 95 s gorGor5.CYUI01015032v1 11454692 54 - 12463322 TCCGGCTGTTTCTCTTGTCTACTGATGGTGCCGGGGGTCCGGCTGTTTCTCTTG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156282346 54 + 157873769 TCCGGCTGTTTCTGTTGTGTACTGATGGTGCCGGGGGTCCGGCTGTTTCTGTTG i nomLeu3.chr3 C 0 C 0 e otoGar3.GL873575 10933106 114 - 12073884 I e saiBol1.JH378287 1271846 4 - 2905041 I e aotNan1.NW_018494782v1 1482736 140 - 1813869 I e cebCap1.NW_016107695v1 1228859 42 - 2164891 I e calJac3.chr4 169858805 1 + 171630274 I e dasNov3.JH569188 537724 2 + 760995 I e colAng1.NW_012114488v1 15588897 0 - 23502949 C e canFam3.chr1 56155914 445 + 122678785 I e chlSab2.chr13 96649931 1 + 98384682 I e cerAty1.NW_012002071v1 1371483 0 + 3144229 C e manLeu1.NW_012106474v1 8194678 16 - 10857215 I e macNem1.NW_012011000v1 8340938 0 + 10161646 C e rheMac8.chr4 170308403 0 + 172585720 C e macFas5.chr4 169054221 0 - 170955103 C a score=7581.000000 s hg38.chr6_KB021644v2_alt 82009 15 + 185823 TCTACTGATGGTGCC s panTro5.chr6 173534410 15 + 175400573 CCTACTGATGGTGCC i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11454746 15 - 12463322 TCTACTGATGGTGCC i gorGor5.CYUI01015032v1 C 0 I 71 s nomLeu3.chr3 156282400 15 + 157873769 TGTACTGATGGTGCC i nomLeu3.chr3 C 0 C 0 e otoGar3.GL873575 10933106 114 - 12073884 I e saiBol1.JH378287 1271846 4 - 2905041 I e aotNan1.NW_018494782v1 1482736 140 - 1813869 I e cebCap1.NW_016107695v1 1228859 42 - 2164891 I e calJac3.chr4 169858805 1 + 171630274 I e dasNov3.JH569188 537724 2 + 760995 I e colAng1.NW_012114488v1 15588897 0 - 23502949 C e canFam3.chr1 56155914 445 + 122678785 I e chlSab2.chr13 96649931 1 + 98384682 I e cerAty1.NW_012002071v1 1371483 0 + 3144229 C e manLeu1.NW_012106474v1 8194678 16 - 10857215 I e macNem1.NW_012011000v1 8340938 0 + 10161646 C e rheMac8.chr4 170308403 0 + 172585720 C e macFas5.chr4 169054221 0 - 170955103 C e panPan2.chr6 171773317 95 + 173848474 T a score=34699.000000 s hg38.chr6_KB021644v2_alt 82024 41 + 185823 GGGGGTCCGGCTGTTTCTCTTGTCTACTGATGGTGCCGGGG s panTro5.chr6 173534425 41 + 175400573 GGGGGTCTGGCTGTGTCTCTTGTCTACTGATGGTGCCAGGG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171773222 41 + 173848474 GGGGGTCCGGCTGTTTCTCTTGCCTACTGATGGTGCCGGGG i panPan2.chr6 T 95 I 35 s gorGor5.CYUI01015032v1 11454832 41 - 12463322 GGGGGTCTGGCTGTTTCTCTTGTCTACTGATGGTGCCGGGG i gorGor5.CYUI01015032v1 I 71 C 0 s nomLeu3.chr3 156282415 41 + 157873769 GGGGGTCCGGCTGTTTCTGTTGTGTACTGATGGTGCTGGGG i nomLeu3.chr3 C 0 C 0 e otoGar3.GL873575 10933106 114 - 12073884 I e saiBol1.JH378287 1271846 4 - 2905041 I e aotNan1.NW_018494782v1 1482736 140 - 1813869 I e cebCap1.NW_016107695v1 1228859 42 - 2164891 I e calJac3.chr4 169858805 1 + 171630274 I e dasNov3.JH569188 537724 2 + 760995 I e colAng1.NW_012114488v1 15588897 0 - 23502949 C e canFam3.chr1 56155914 445 + 122678785 I e chlSab2.chr13 96649931 1 + 98384682 I e cerAty1.NW_012002071v1 1371483 0 + 3144229 C e manLeu1.NW_012106474v1 8194678 16 - 10857215 I e macNem1.NW_012011000v1 8340938 0 + 10161646 C e rheMac8.chr4 170308403 0 + 172585720 C e macFas5.chr4 169054221 0 - 170955103 C a score=5991.000000 s hg38.chr6_KB021644v2_alt 82065 11 + 185823 GTCCGGCTGTT s panTro5.chr6 173534466 11 + 175400573 GTCTGGCTGTT i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11454873 11 - 12463322 GTCCGGCTGTT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156282456 11 + 157873769 GTCCGGCTGTT i nomLeu3.chr3 C 0 C 0 e otoGar3.GL873575 10933106 114 - 12073884 I e saiBol1.JH378287 1271846 4 - 2905041 I e aotNan1.NW_018494782v1 1482736 140 - 1813869 I e cebCap1.NW_016107695v1 1228859 42 - 2164891 I e calJac3.chr4 169858805 1 + 171630274 I e dasNov3.JH569188 537724 2 + 760995 I e colAng1.NW_012114488v1 15588897 0 - 23502949 C e canFam3.chr1 56155914 445 + 122678785 I e chlSab2.chr13 96649931 1 + 98384682 I e cerAty1.NW_012002071v1 1371483 0 + 3144229 C e manLeu1.NW_012106474v1 8194678 16 - 10857215 I e macNem1.NW_012011000v1 8340938 0 + 10161646 C e rheMac8.chr4 170308403 0 + 172585720 C e macFas5.chr4 169054221 0 - 170955103 C e panPan2.chr6 171773263 35 + 173848474 I a score=910.000000 s hg38.chr6_KB021644v2_alt 82076 1 + 185823 T s panTro5.chr6 173534477 1 + 175400573 T i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11454884 1 - 12463322 T i gorGor5.CYUI01015032v1 C 0 T 546 s nomLeu3.chr3 156282467 1 + 157873769 T i nomLeu3.chr3 C 0 C 0 s dasNov3.JH569188 537726 1 + 760995 T i dasNov3.JH569188 I 2 C 0 e otoGar3.GL873575 10933106 114 - 12073884 I e saiBol1.JH378287 1271846 4 - 2905041 I e aotNan1.NW_018494782v1 1482736 140 - 1813869 I e cebCap1.NW_016107695v1 1228859 42 - 2164891 I e calJac3.chr4 169858805 1 + 171630274 I e colAng1.NW_012114488v1 15588897 0 - 23502949 C e canFam3.chr1 56155914 445 + 122678785 I e chlSab2.chr13 96649931 1 + 98384682 I e cerAty1.NW_012002071v1 1371483 0 + 3144229 C e manLeu1.NW_012106474v1 8194678 16 - 10857215 I e macNem1.NW_012011000v1 8340938 0 + 10161646 C e rheMac8.chr4 170308403 0 + 172585720 C e macFas5.chr4 169054221 0 - 170955103 C e panPan2.chr6 171773263 35 + 173848474 I a score=2417.000000 s hg38.chr6_KB021644v2_alt 82077 5 + 185823 CTGTT s panTro5.chr6 173534478 5 + 175400573 CTCTT i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11454339 5 - 12463322 CTCTT i gorGor5.CYUI01015032v1 T 546 C 0 s nomLeu3.chr3 156282468 5 + 157873769 CTGTC i nomLeu3.chr3 C 0 C 0 s dasNov3.JH569188 537727 5 + 760995 CTTTC i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10933106 114 - 12073884 I e saiBol1.JH378287 1271846 4 - 2905041 I e aotNan1.NW_018494782v1 1482736 140 - 1813869 I e cebCap1.NW_016107695v1 1228859 42 - 2164891 I e calJac3.chr4 169858805 1 + 171630274 I e colAng1.NW_012114488v1 15588897 0 - 23502949 C e canFam3.chr1 56155914 445 + 122678785 I e chlSab2.chr13 96649931 1 + 98384682 I e cerAty1.NW_012002071v1 1371483 0 + 3144229 C e manLeu1.NW_012106474v1 8194678 16 - 10857215 I e macNem1.NW_012011000v1 8340938 0 + 10161646 C e rheMac8.chr4 170308403 0 + 172585720 C e macFas5.chr4 169054221 0 - 170955103 C e panPan2.chr6 171773263 35 + 173848474 I a score=22562.000000 s hg38.chr6_KB021644v2_alt 82082 17 + 185823 GTCTACTGATGGTGCCA s panTro5.chr6 173534483 17 + 175400573 GTCTACTGATGGTGCTG i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11454344 17 - 12463322 GTCTACTGATGGTGCCG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156282473 17 + 157873769 GTGTACTCATGGTGACG i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169054221 17 - 170955103 GTCTACTGATGGTGCCG i macFas5.chr4 C 0 I 1 s manLeu1.NW_012106474v1 8194694 17 - 10857215 GTCTACCGATGGTGCCG i manLeu1.NW_012106474v1 I 16 I 1 s dasNov3.JH569188 537732 17 + 760995 GTCTATTTAAAGTGCTT i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10933106 114 - 12073884 I e saiBol1.JH378287 1271846 4 - 2905041 I e aotNan1.NW_018494782v1 1482736 140 - 1813869 I e cebCap1.NW_016107695v1 1228859 42 - 2164891 I e calJac3.chr4 169858805 1 + 171630274 I e colAng1.NW_012114488v1 15588897 0 - 23502949 C e canFam3.chr1 56155914 445 + 122678785 I e chlSab2.chr13 96649931 1 + 98384682 I e cerAty1.NW_012002071v1 1371483 0 + 3144229 C e macNem1.NW_012011000v1 8340938 0 + 10161646 C e rheMac8.chr4 170308403 0 + 172585720 C e panPan2.chr6 171773263 35 + 173848474 I a score=-4083.000000 s hg38.chr6_KB021644v2_alt 82099 2 + 185823 -GA s panTro5.chr6 173534500 2 + 175400573 -GG i panTro5.chr6 C 0 I 74 s gorGor5.CYUI01015032v1 11454361 2 - 12463322 -GG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156282490 2 + 157873769 -GG i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169054239 1 - 170955103 -G- i macFas5.chr4 I 1 C 0 s chlSab2.chr13 96649932 1 + 98384682 -G- i chlSab2.chr13 I 1 C 0 s manLeu1.NW_012106474v1 8194712 1 - 10857215 -G- i manLeu1.NW_012106474v1 I 1 C 0 s dasNov3.JH569188 537749 2 + 760995 GG- i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10933106 114 - 12073884 I e saiBol1.JH378287 1271846 4 - 2905041 I e aotNan1.NW_018494782v1 1482736 140 - 1813869 I e cebCap1.NW_016107695v1 1228859 42 - 2164891 I e calJac3.chr4 169858805 1 + 171630274 I e colAng1.NW_012114488v1 15588897 0 - 23502949 C e canFam3.chr1 56155914 445 + 122678785 I e cerAty1.NW_012002071v1 1371483 0 + 3144229 C e macNem1.NW_012011000v1 8340938 0 + 10161646 C e rheMac8.chr4 170308403 0 + 172585720 C e panPan2.chr6 171773263 35 + 173848474 I a score=10617.000000 s hg38.chr6_KB021644v2_alt 82101 4 + 185823 ---GGTC- s panTro5.chr6 173534576 4 + 175400573 ---GGTC- i panTro5.chr6 I 74 C 0 s panPan2.chr6 171773298 4 + 173848474 ---GGTC- i panPan2.chr6 I 35 C 0 s gorGor5.CYUI01015032v1 11454363 4 - 12463322 ---GGTC- i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156282492 4 + 157873769 ---GGTG- i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170308403 4 + 172585720 ---GGAC- i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169054240 4 - 170955103 ---GGAC- i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8340938 4 + 10161646 ---GGAC- i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1371483 4 + 3144229 ---GGAC- i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96649933 4 + 98384682 ---GGAC- i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8194713 4 - 10857215 ---GGAC- i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15588897 4 - 23502949 ---GGAC- i colAng1.NW_012114488v1 C 0 C 0 s dasNov3.JH569188 537751 8 + 760995 GTTGAGCC i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10933106 114 - 12073884 I e saiBol1.JH378287 1271846 4 - 2905041 I e aotNan1.NW_018494782v1 1482736 140 - 1813869 I e cebCap1.NW_016107695v1 1228859 42 - 2164891 I e calJac3.chr4 169858805 1 + 171630274 I e canFam3.chr1 56155914 445 + 122678785 I a score=-2814.000000 s hg38.chr6_KB021644v2_alt 82105 1 + 185823 T s panTro5.chr6 173534580 1 + 175400573 T i panTro5.chr6 C 0 C 0 s panPan2.chr6 171773302 1 + 173848474 T i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11454367 1 - 12463322 C i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156282496 1 + 157873769 C i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170308407 1 + 172585720 A i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169054244 1 - 170955103 A i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8340942 1 + 10161646 A i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1371487 1 + 3144229 A i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96649937 1 + 98384682 A i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8194717 1 - 10857215 A i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15588901 1 - 23502949 A i colAng1.NW_012114488v1 C 0 C 0 s cebCap1.NW_016107695v1 1228901 1 - 2164891 T i cebCap1.NW_016107695v1 I 42 C 0 s dasNov3.JH569188 537759 1 + 760995 A i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10933106 114 - 12073884 I e saiBol1.JH378287 1271846 4 - 2905041 I e aotNan1.NW_018494782v1 1482736 140 - 1813869 I e calJac3.chr4 169858805 1 + 171630274 I e canFam3.chr1 56155914 445 + 122678785 I a score=2660.000000 s hg38.chr6_KB021644v2_alt 82106 1 + 185823 -G s panTro5.chr6 173534581 1 + 175400573 -G i panTro5.chr6 C 0 C 0 s panPan2.chr6 171773303 1 + 173848474 -G i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11454368 1 - 12463322 -G i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156282497 1 + 157873769 -G i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170308408 1 + 172585720 -G i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169054245 1 - 170955103 -G i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8340943 1 + 10161646 -G i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1371488 1 + 3144229 -G i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96649938 1 + 98384682 -G i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8194718 1 - 10857215 -G i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15588902 1 - 23502949 -G i colAng1.NW_012114488v1 C 0 C 0 s saiBol1.JH378287 1271850 1 - 2905041 -G i saiBol1.JH378287 I 4 C 0 s cebCap1.NW_016107695v1 1228902 1 - 2164891 -G i cebCap1.NW_016107695v1 C 0 C 0 s dasNov3.JH569188 537760 1 + 760995 C- i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10933106 114 - 12073884 I e aotNan1.NW_018494782v1 1482736 140 - 1813869 I e calJac3.chr4 169858805 1 + 171630274 I e canFam3.chr1 56155914 445 + 122678785 I a score=86133.000000 s hg38.chr6_KB021644v2_alt 82107 9 + 185823 GCTGTTTCT s panTro5.chr6 173534582 9 + 175400573 GCTGTTTCT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171773304 9 + 173848474 GCTGTTTCT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11454369 9 - 12463322 GCTGTTTCT i gorGor5.CYUI01015032v1 C 0 I 1028 s nomLeu3.chr3 156282498 9 + 157873769 GCTGTTTCT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170308409 9 + 172585720 GCTGTTTCT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169054246 9 - 170955103 GCTGTTTCT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8340944 9 + 10161646 GCTGTTTCT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1371489 9 + 3144229 GCTGTTTCT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96649939 9 + 98384682 GCTGTTTCT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8194719 9 - 10857215 GCTGTTTCT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15588903 9 - 23502949 GCTGTTTCT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169858806 9 + 171630274 GCCGCTTCT i calJac3.chr4 I 1 C 0 s saiBol1.JH378287 1271851 9 - 2905041 GCCGCCTCT i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1228903 9 - 2164891 GCCGCTTCT i cebCap1.NW_016107695v1 C 0 C 0 s dasNov3.JH569188 537761 9 + 760995 TCTATTTCT i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10933106 114 - 12073884 I e aotNan1.NW_018494782v1 1482736 140 - 1813869 I e canFam3.chr1 56155914 445 + 122678785 I a score=168020.000000 s hg38.chr6_KB021644v2_alt 82116 27 + 185823 GTTGAC----------TTCCTGTTTCTTCCCTTTGCA s panTro5.chr6 173534591 27 + 175400573 GTTGAC----------TTCCAGTTTCTTCCCTTTGCA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171773313 27 + 173848474 GTTGAC----------TTCCAGTTTCTTCCCTTTGCA i panPan2.chr6 C 0 C 0 s nomLeu3.chr3 156282507 27 + 157873769 GTTGAC----------TTCCTGTTTCTTCCCTTTGCA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170308418 27 + 172585720 GTTGAC----------TTTCTGTTTTTTCCCTTTGCA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169054255 27 - 170955103 GTTGAC----------TTTCTGTTTTTTCCCTTTGCA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8340953 27 + 10161646 GTTGAC----------TTCCTGTTTTTTCCCTTTGCA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1371498 27 + 3144229 GTTGAC----------TTCCTGTTTCTTCCCGTTGCA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96649948 27 + 98384682 GTTGAC----------TTCCTGTTTCTTCCCTTTGCA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8194728 27 - 10857215 GTTGAC----------TTCCTGTTTCTTCCCGTTGCA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15588912 27 - 23502949 GTTGAC----------TTCCTGTTTCTTCCCTTTGCA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169858815 26 + 171630274 GTTGGC----------CTCCTCTTCCTTCCCTTCG-A i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1271860 26 - 2905041 GCTGAC----------CTCCTCCTCCTTCCCTTCA-A i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1228912 26 - 2164891 GTTGAC----------CTCCTCCTCCTTCCCTTCG-A i cebCap1.NW_016107695v1 C 0 C 0 s dasNov3.JH569188 537770 37 + 760995 GTTAACAGGGAAGCTTTTATAGCTTGTTGATTTTCCA i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10933106 114 - 12073884 I e aotNan1.NW_018494782v1 1482736 140 - 1813869 I e canFam3.chr1 56155914 445 + 122678785 I e gorGor5.CYUI01015032v1 11454378 1028 - 12463322 I a score=431021.000000 s hg38.chr6_KB021644v2_alt 82143 62 + 185823 GCTCACCGATTTTCCAAAGTACGGACACCTGGTGTAGTTGCCCTCAGCTG----TATTCAGACCTA s panTro5.chr6 173534618 62 + 175400573 GCTCACTGATTTTCCAAAGTATGGACACCTGGTGTAGTTGCCCTCAGCTG----TATTCAGACCTA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171773340 62 + 173848474 GCTCACTGATTTTCCAAAGTATGGACACCTGGTGTAGTTGCCCTCAGCTG----TATTCAGACCTA i panPan2.chr6 C 0 C 0 s nomLeu3.chr3 156282534 62 + 157873769 GCTCACCGATTTTCCAAAGTATGGACACCTGGCACAGTTGCCCTCAGCTG----TATTCAGACCTA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170308445 62 + 172585720 GCTCACCAATTTTCCAAAGTACGGACACTTGGCGCAGTTGCCCTCGGCTG----TATTCAGACCTA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169054282 62 - 170955103 GCTCACCAATTTTCCAAAGTACGGACACTTGGCGCAGTTGCCCTCGGCTG----TATTCAGACCTA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8340980 62 + 10161646 GCTCACCAATTTTCCAAACTACGGACACTTGGTGCAGTTGCCCTCGGCTG----TATTCAGACCTA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1371525 59 + 3144229 GCTCACCAATTTTCCAAAGTACAGAC---TGGCGCAGTTGCCTTCGGCTG----TATTCAGACCTA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96649975 62 + 98384682 GCTCACCAATTTTCCAAAGTACGGACACTTGGCGCAGTTGCCCTCAGCTG----TATTCAGACCTA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8194755 62 - 10857215 GCTCACCAATTTTCCGAAGTATGGACACTTGGCGCAGTTGCCTTCGGCTG----TATTCAGACCTA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15588939 62 - 23502949 GCTCACCAATTTTCCAAAGTACAGACACCTGGCACAGTTGCCCTCAGCTG----TATTCAGACCTA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169858841 50 + 171630274 GCTCACCGATCTTCCAAGGTACGTTCATCTGGCACAGGTGCCCTCGG----------------CTC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1271886 62 - 2905041 GCTCACTGATCTTCCAAAGTACGTTCACCTGCCGCAGGTGCCCTCAGCTA----TCCTCGGACCTC i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1228938 62 - 2164891 GCTCACCGGTCTTCCAAGGCACGTTCACCTGGCGCAGGTGCCCTCAGCTA----TCGTCAGACCTC i cebCap1.NW_016107695v1 C 0 C 0 s otoGar3.GL873575 10933220 64 - 12073884 GCTCACTGATTTCTCAGCAAACCATT--CTGGGGCCGCTGCCGTCAGCTGTCCATCCTCAGACCCA i otoGar3.GL873575 I 114 C 0 s dasNov3.JH569188 537807 58 + 760995 -------GGACTTCCAATGTCCTAACATCTGGTA-AGTTGCCTGCAGCTGTCGGTCTTCAAACCTA i dasNov3.JH569188 C 0 I 4 e aotNan1.NW_018494782v1 1482736 140 - 1813869 I e canFam3.chr1 56155914 445 + 122678785 I e gorGor5.CYUI01015032v1 11454378 1028 - 12463322 I a score=247339.000000 s hg38.chr6_KB021644v2_alt 82205 22 + 185823 TTCAGAAACAGCTGCC--TCTGAC s panTro5.chr6 173534680 22 + 175400573 TTCAGAAACAGCTGCC--TCTGAC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171773402 22 + 173848474 TTCAGAAACAGCTGCC--TCTGAC i panPan2.chr6 C 0 C 0 s nomLeu3.chr3 156282596 22 + 157873769 TTCAGAAACAGCTGCC--TCTGAC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170308507 22 + 172585720 TTCAGAAACAGCTGCC--TCTGAC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169054344 22 - 170955103 TTCAGAAACAGCTGCC--TCTGAC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8341042 22 + 10161646 TTCAGAAACAGCTGCC--TCTGAC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1371584 22 + 3144229 TTCAGAAACAGCTGCC--TCTGAC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96650037 22 + 98384682 TTCAGAAACAGCTGCC--TCTGAC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8194817 22 - 10857215 TTCAGAAACAGCTGCC--TCTGAC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15589001 22 - 23502949 TTCAGAAACAGCTGCC--TCTGAC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169858891 22 + 171630274 TCCAGAAACAGCTGCC--TCTGAC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1271948 22 - 2905041 TTCAGAAACAGCTGCC--TCTGAT i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1229000 22 - 2164891 TTCAGAAACAGCTGCC--TCTGAT i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1482876 22 - 1813869 TTCAGAAAGAGCTGCC--TCTGAC i aotNan1.NW_018494782v1 I 140 C 0 s otoGar3.GL873575 10933284 24 - 12073884 GCCAGAAACAGCTGTCTTTCTGTC i otoGar3.GL873575 C 0 C 0 s dasNov3.JH569188 537869 22 + 760995 CTTAGAAACAGCTGCC--TTTTAT i dasNov3.JH569188 I 4 C 0 e canFam3.chr1 56155914 445 + 122678785 I e gorGor5.CYUI01015032v1 11454378 1028 - 12463322 I a score=1061765.000000 s hg38.chr6_KB021644v2_alt 82227 113 + 185823 ATGCTGAAATTTACCTTTTTATCCTAACATTTCAACTGCC-GTTTTTAATTTTC--AAAATAA-ACTGTGAGGTTTGATATTGTTCA---GAG---TTCACACAACAAGTC---T---TTCATCCTCAT s panTro5.chr6 173534702 113 + 175400573 ATCCTGAAATTTACCTTTTTATCCTAACATTTCAACTGCC-GTTTTTAATTTTC--AAAATAA-ACTGTGAGGCTTGATATTGTTCA---GGG---TTCACACAAGAAGTC---T---TTCATCCTCAT i panTro5.chr6 C 0 I 1 s panPan2.chr6 171773424 113 + 173848474 ATCCTGAAATTTACCTTTTTATCCTAACATTTCAACTGCC-GTTTTTAATTTTC--AAAATAA-ACTGTGAGGCTTGATATTGTTCA---GGG---TTCACACAAGAAGTC---T---TTCATCCTCAT i panPan2.chr6 C 0 I 1 s nomLeu3.chr3 156282618 113 + 157873769 ATCCTGAAATTTATCTTTTTATTCTAACATTTCAACTGCC-GTTTTTAATTTTC--AAAATAA-ACTGTGAGATTTGATATTGTTCA---GAG---TTCATGGAACAAGTC---T---TTCATCCTCAT i nomLeu3.chr3 C 0 I 1 s rheMac8.chr4 170308529 113 + 172585720 ATCATGAAATTTACCTTTTTATTCTAACTTTTCAACTGCC-ATTTTTAATTTTC--AGAATAA-ACTGTGAGGTTTGATATTGTTCA---GAG---TTCACGCAACAAGTC---T---TTCATCCTCAT i rheMac8.chr4 C 0 I 1 s macFas5.chr4 169054366 113 - 170955103 ATCATGAAATTTACCTTTTTATTCTAACTTTTCAACTGCC-ATTTTTAATTTTC--AGAATAA-ACTGTGAGGTTTGATATTGTTCA---GAG---TTCACGCAACAAGTC---T---TTCATCCTCAT i macFas5.chr4 C 0 I 1 s macNem1.NW_012011000v1 8341064 113 + 10161646 ATCATGAAATTTACCTTTTTATTCTAACTTTTCAACTGCC-ATTTTTAATTTTC--AGAATAA-ACTGTGAGGTTTGATATTGTTCA---GAG---TTCACGCAACAAGTC---T---TTCATCCTCAT i macNem1.NW_012011000v1 C 0 I 1 s cerAty1.NW_012002071v1 1371606 113 + 3144229 ATCATGAAATTTACCTTTTTATTCTAACTTTTCAACTGCC-GTTTTTAATTTTC--AGAATAA-ACTGTGAAGTTTGCTATTGTTCA---GAA---TTCACGCAACAAGTC---T---TTCATCCTCAT i cerAty1.NW_012002071v1 C 0 I 1 s chlSab2.chr13 96650059 113 + 98384682 ATCATGAAATTTACCTTTTTATTCTAACTTTTCAACTGCC-GTTTTTAATTTTC--AGAATAA-ACCGTGAGGTTTGATATTGTTCA---GAA---TTCACGCAACAAGTC---T---TTCATCTTCAT i chlSab2.chr13 C 0 I 1 s manLeu1.NW_012106474v1 8194839 113 - 10857215 ATCATGAAATTTACCTTTTTATTCTAACTTTTCAACTGCC-GTTTTTAATTTTC--AGAATAA-ACTGTGAAGTTTGATATTGTTCA---GAA---TTCACACAACAAGTC---T---TTCATCCTCAT i manLeu1.NW_012106474v1 C 0 I 1 s colAng1.NW_012114488v1 15589023 113 - 23502949 ATCATGAAATTTACCTTTTTATTCTAACTTTTCAACTGCC-ATTTTTAATTTTC--AGAATAA-ACTGTGAGGTTTGATATTGTTCA---GAG---TTCACGCAACAAGTC---T---TTCATCCTCAT i colAng1.NW_012114488v1 C 0 I 1 s calJac3.chr4 169858913 114 + 171630274 ATCATGAAATTTTCCTTTTTATTCTAACTTCTCAACTGCT-GTTTTTCATTTTCAAAAAAAAACGCTGTTCGGTTTGATATCCTCCA---GAG---TTCATGC-ACAAACC-------TTGGTTCTCAC i calJac3.chr4 C 0 I 1 s saiBol1.JH378287 1271970 114 - 2905041 ATCATGAAATTCACCTTTTTATTCTAACTTCTCAACTGCT-GTTTTTAATTTTC--AAAAAAACCCTATTAGGTTTGATATCCTTCA---GAG---TTCATGCAACAAGCC---T---TTTATTCTCAC i saiBol1.JH378287 C 0 I 1 s cebCap1.NW_016107695v1 1229022 114 - 2164891 ATCATGAAATTTACCTTTTTATTCTAACTTCTCAGCTGCT-GTTTTTAATTTTC--AAAAAAACCCTATTAGGTTTGATATCCTTCA---GAG---CTCATGCAACAAGGC---T---TTGATTCCCAC i cebCap1.NW_016107695v1 C 0 I 1 s aotNan1.NW_018494782v1 1482898 114 - 1813869 ATCATGAAGTTTACCTGTTTATTCTAACTTCTCAACTGCT-GTTTTTAATTTTC--AAAAAAACCCTGTTAGGTTTGATACCCTTCG---GAG---TTCATGCAACAAGCC---T---TCGATTCTCAC i aotNan1.NW_018494782v1 C 0 I 1 s otoGar3.GL873575 10933308 120 - 12073884 TCTGTGAAACTCACTTTTGGGTTCTAATGTTTCAGCTGCTGGTTTTTAATTTTC--AGAATAA-AAGTTTAGGTTTGATACTTTTCACATGAG---TTTGTGCAACAAGCTTCAT---TTCATTCTCAG i otoGar3.GL873575 C 0 I 1 s canFam3.chr1 56156359 120 + 122678785 ATGACGAGACTTACCTCTCCGCTTGAATGTCTTAGCAGCCAGCTTCTAATTTGC--AAAATTA-AATGTTAGGTTTGATACGGTTCA---GAGGGACTCGTGCAGCTGATTTCTT---CTCGTTCTCCT i canFam3.chr1 I 445 I 1 s dasNov3.JH569188 537891 119 + 760995 ATCAAGGAACTCACCTTTGCATTTCGATGTTTCAACTGCT-Gtttttaattctt--taaataa-tattttatatttGATATTGTTCA---GAGGAATTCATGCAGCAGATT---TACCTTCATCCTCAT i dasNov3.JH569188 C 0 I 1 e gorGor5.CYUI01015032v1 11454378 1028 - 12463322 I a score=6515876.000000 s hg38.chr6_KB021644v2_alt 82340 643 + 185823 TAGAAATATCTCTTC-----------AAGG----------CCAGAGCCTCTGTGGTTTCTCCTCCCTAACACAGACACTGAATGCCATAACTGTGTGTTTGGGAAAGCATCCTTTATAAGGGTTCCCTGTCTGTCAATTAAGAAAGTGGTTCCATGAAAACACATCC-----TTTGTTTTATGAGCAGAATCAGAGATT-CCGGGGAGAAACAGGACCCAGGGAGATGAGAGCTTTCAGAGATACCGGAGAGCTTGG-----------------------CTGGTCTGGG------TGTGAGGCCAGAGGAGGGGCCTCCCC--TTCGGCATCTCAGTAGGACCACGCCAGTCCGGCC-CGACCACAGTGACCTTCAGGGGACTGACcttggacgggtgttaaacctccctattccacagccct-c--ccagaggctctgacttagtatttagcaaggggctgagggattcttcattcatagca--atgctcccaggt----a-----atAGTCGGACAGTTTCTGGAAGCACTAAATTA----------------------T-TGAATTGTAAGCACTCATTTGCATCAGATGCTGTATAGGCTGCCACCTCAAAGTGTATAGAATGGGA-TAAAAACTAAA-TGAAAGTGG---ATTAAAACACTCTAAAAAA--GTGTTGAGTTTGGGGTTGAGGCCTCAAATCAGTGATTATAAGAACAAAATTTCACTAGGATCTTAGAAT s panTro5.chr6 173534816 644 + 175400573 TAGAAATATCTTTTC-----------AAGG----------CCAGAGCCTCTGTGGTTTCTCCTGCTTATCACAGACAGTGAATGCCATAACTGTGTGTTTGGGAAAGCATCCTTTATAAGGGTTCCCTGTCTGTCAATTAAGAAAGTGGTTCCATGAAAACACGTCC-----TTTGTTTTATGAGCAGAATCAGAGATT-CCGGGGAGAAACAGGACCCAGGGAGATGAGAGCTTTCAGAGATACCGGAGAGCTTGG-----------------------CTGGTCTGGG------TGTGAGGCCAGAGGAGGGGCCTCCCC--CTCGGCATCTCAGTAGGACCACGCCAGTCCGGCC-CGACCACAGTGACCTTCAGGGGACTGACCTTGGACGGGTGTTAAACCTCCCTATTCCACAGCCct-c--ccagaggctctgacttagtatttagcaaggggctgagggattcttcattcatagca--atgctcccaggt----a-----atAGTCGGACAGTTTCTGGAAGCACTAAATTA----------------------T-TGAATTGTAAGCACTCATTTGCATCAGATGCTGTATAGGCTGCCACCTCAAAGTGTATAAAATGGGA-TAAAAACTAAA-TGAAAGTGG---ATTAAAACACTCTAAAAAA-AGTGTTGAGTTTGGGGTTGAGGCCTCAAATCAGTGATTATAAGAACAAAATTTCACTAGGATCTTAGAAT i panTro5.chr6 I 1 C 0 s panPan2.chr6 171773538 644 + 173848474 TAGAAATATCTTTTC-----------AAGG----------CCAGAGCCTCTGTGGTTTCTCCTGCTTATCACAGACAGTGAATGCCATAACTGTGTGTTTGGGAAAGCATCCTTTATAAGGGTTCCCTGTCTGTCAATTAAGAAAGTGGTTCCATGAAAACATGTCC-----TTTGTTTTATGAGCAGAATCAGAGATT-CCGGGGAGAAACAGGACCCAGGGAGATGAGAGCTTTCAGAGATACCGGAGAGCTTGG-----------------------CTGGTCTGGG------TGTGAGGCCAGAGGAGGGGCCTCCCC--CTCGGCATCTCAGTAGGACCACGCCAGTCCGGCC-CGACCACAGTGACCTTCAGGGGACTGACCTTGGACGGGTGTTAAACCTCCCTATTCCACAGCCct-c--ccagaggctctgacttagtatttagcaaggggctgagggattcttcattcatagca--atgctcccaggt----a-----atAGTCGGACAGTTTCTGGAAGCACTAAATTA----------------------T-TGAATTGTAAGCACTCATTTGCATCAGATGCTGTATAGGCTGCCACCTCAAAGTGTATAAAATGGGA-TAAAAACTAAA-TGAAAGTGG---ATTAAAACACTCTAAAAAA-AGTGTTGAGTTTGGGGTTGAGGCCTCAAATCAGTGATTATAAGAACAAAATTTCACTAGGATCTTAGAAT i panPan2.chr6 I 1 C 0 s gorGor5.CYUI01015032v1 11455406 642 - 12463322 TAGAAATATCTTTTC-----------AAGG----------CCAGAGCCTCTGTAGTTTCTCCTCCTTAATACAGACACTGAATGACATCACTGTGTGTGTGGGAAAGCATCCTTTATAAGGGTTCCCTGTCTGTCAATTAAGAAAGTGGTTCCATGAAAACATGTCC-----TTTGTTTTATGAGCAGAATCAGAGATT-CCGGGGAGAAACAGGACCCAGGGAGATGAGAGCTTTCAGAGATACCGGAGAGCTTGG-----------------------CTGGTCTGGG------TGTGAGGCCAGAGGAGGGGCCTCCCC--GTCGGCATCTCAGTAGGACCACGCCAGTCTGGCC-CGACCACAGTGACCTTCAGGGGACTGACCTTGGACGGGTGTTAAACCTCCCTATTTCACAGCCct-c--gcagaggctctgacttagtatttagcaaggggctgagggattcttcattcatagca--atgctcccaggt----a-----atAGTCGGACAGTTTCTGGAAGCACTAAATTA----------------------T-TGAATTGTAAGCACTCATTTGCATCAGATGCTGTATAGGCTGCCACCTCAAAGTGTATAAAATGGGA-TAAAAACTAAA-TGAAAGTGG---ATTAAAACA--CTAAAAAA-AGTGTTGAGTTTGGGGTTGAGGCCTCAAATCAGTGATTATAAGAACAAAATTTCACTAGGATCTTAGAAT i gorGor5.CYUI01015032v1 I 1028 C 0 s nomLeu3.chr3 156282732 648 + 157873769 TAGAAATATCTTTTC-----------AAGG----------CCAGAGCCTCTGTGGTTTCTCCTCCTTAACACAGACGCTGAATGACATAACTGTGTGTTTGGGAAAACATCCTTTGTAAGGGTTCTCTGTCTGTCAATTAAGAAAGTGCTTCCATGAAAACACATCC-----TTTGTTTTATGAGCAGAATCAGAGATTCCCAGGGAGAAACAGGACCCAGGGAGATGAGAGCTTTCAGAGATACCGGAGAGCTTGG-----------------------CTGGTCTGGGTATCTCTGTGAGGCCAGAGGAGGGGCCTC------TCAGCATCTCAGTAGGACCACGCCAGTCCGGCC-TGACCACAGTGACCTTCGGGGGACTGATCTTGGATGGGTGTTAAACCTCCCTATTCCACAGCCct-c--ccaaaggctctgacttagtacttagcaaggggctgagggattcttcattcatagca--atgctcccaggt----a-----atAGTCAGACAGTTTCTGGAAGCACTAAATTA----------------------T-TGAATTGTAAGCACTCATTTGCATCAGATGCTGTATAGGCTGCCACCTCAAAGTGTATAAAACGGGA-TAAAAACTAAA-CGAAAGTGG---ATTAAAACATTCTAAAAAAAAGTGTTAAGTTTGGGGTTGAGGCCTCAAATCAGTGATTATAAGAACAACATTTCACTAGGCTCTTAGAAT i nomLeu3.chr3 I 1 C 0 s rheMac8.chr4 170308643 646 + 172585720 TAGAAATATCTTTTC-----------AAGG----------CCAGAGCCTGTGTGGTTTCTCCTCCTTAACAGAAACACTGAATGACATAACTGTGTGTTTGGGACAACATCCTTTATAAGGGTTCCCCGTCTGTCAATTAAGAAAGTGGTTCCATGAAAACACATCC-----TTTGTTTTACGAGCAGAATCAGAGATT-CCGGGGAGAAACAGGACCCAGGGAGATGAGCGCTTTCAAAGATACCTGAGAGCTTGG-----------------------CTGGTCTGGG------TGTGAGGCCAGAGGAGGGGCCCTCCCCGCTCAGCATCTCAGTAGGACCACGCCAGTCCGGCC-CGACCACAGTGACCTTCAGGGGACTGACCTTGGATGGGTGTTAAACCCCCCTATTCCACAGCCCT-C--CCAGAGGCTCTGACTTAGGACTTAGCAAGGGGCTGAGGGGTTCTTCATTCATAGCA--ATGCTGCCAGGT----A-----ATAGTCAGACAGTTTCTGGAAGCACTAAATTA----------------------T-TGAATTGTAAGCACTCATTGGCATCAGATGCTGTATAGGCTGCCTCCTCAAAGTGTATAAAATGGGA-TAAAAACTAAA-TGAAAGTGG---ATTAAAACATTCTAAAAAA-AGTGTTGAGTTTGGGATTGATGCCTCAAATTGGTGATTATAAGAACAAAATTTCACTAGGATCTTAGAAT i rheMac8.chr4 I 1 I 300 s macFas5.chr4 169054480 646 - 170955103 TAGAAATATCTTTTC-----------AAGG----------CCAGAGCCTGTGTGGTTTCTCCTCCTTAACAGAAACACTGAATGACATAACTGTGTGTTTGGGACAACATCCTTTATAAGGGTTCCCCGTCTGTCAATTAAGAAAGTGGTTCCATGAAAACACATCC-----TTTGTTTTACGAGCAGAATCAGAGATT-CCGGGGAGAAACAGGACCCAGGGAGATGAGAGCTTTCAGAGATACCTGAGAGCTTGG-----------------------CTGGTCTGGG------TGTGAGGCCAGAGGAGGGGCCCTCCCCGCTCAGCATCTCAGTAGGACCACGCCAGTCCGGCC-CGACCACAGTGACCTTCAGGGGACTGACCTTGGATGGGTGTTAAACCCCCCTATTCCACAGCCCT-C--CCAGAGGCTCTGACTTAGGACTTAGCAAGGGGCTGAGGGGTTCTTCATTCATAGCA--ATGCTGCCAGGT----A-----ATAGTCGGACAGTTTCTGGAAGCACTAAATTA----------------------T-TGAATTGTAAGCACTCATTGGCATCAGATGCTGTATAGGCTGCCTCCTCAAAGTGTATAAAATGGGA-TAAAAACTAAA-TGAAAGTGG---ATTAAAACATTCTAAAAAA-AGTGTTGAGTTTGGGATTGATGCCTCAAATTGGTGATTATAAGAACAAAATTTCACTAGGATCTTAGAAT i macFas5.chr4 I 1 I 301 s macNem1.NW_012011000v1 8341178 646 + 10161646 TAGAAATATCTTTTC-----------AAGG----------CCAGAGCCTGTGTGGTTTCTCCTCCTTAACAGAAACACTGAATGACATAACTGTGTGTTTGGGACAACATCCTTTATAAGGGTTCCCCGTCTGTCAATTAAGAAAGTGGTTCCATGAAAACACATCC-----TTTGTTTTACGAGCAGAATCAGAGATT-CCGGGGAGAAACAGGACCCAGGGAGATGAGAGCTTTCAGAGATACCTGAGAGCTTGG-----------------------CTGGTCTGGG------TGTGAGGCCAGAGGAGGGGCCCTCCCCGCTCAGCATCTCAGTAGGACCACGCCAGTCCGGCC-CGACCACAGTGACCTTCAGGGGACTGACCTTGGATGGGTGTTAAACCCCCCTATTCCACAGCCCT-C--CCAGAGGCTCTGACTTAGGACTTAGCAAGGGGCTGAGGGGTTCTTCATTCATAGCA--ATGCTGCCAGGT----A-----ATAGTCGGACAGTTTCTGGAAGCACTAAATTA----------------------T-TGAATTGTAAGCACTCATTGGCATCAGATGCTGTATAGGCTGCCTCCTCAAAGTGTATAAAATGGGA-TAAAAACTAAA-TGAAAGTGG---ATTAAAACATTCTAAAAAA-AGTGTTGAGTTTGGGATTGATGCCTCAAATTGGTGATTATAAGAACAAAATTTCACTAGGATCTTAGAAT i macNem1.NW_012011000v1 I 1 I 303 s cerAty1.NW_012002071v1 1371720 646 + 3144229 TAGAAATATCTTTTC-----------AAGG----------CCAGAGCCTGTGTGGTTTCTCCTCCTTAACACAAACACTGAATGACATAACTGTGTGTTTGGGACAACATCCTTTATAAGGGTTCCCCGTCTGTCAATTAAGAAAGTGGTTCCATGAAAACACATCC-----TTTGTATTATGAGCAGAATCAGAGAGT-TCGGGGAGAAACAGGACCCAGGGAGATGAGAGCTTTCAGAGATACCGGAGAGCTTGG-----------------------CTGGTCTGGG------TGTGAGGCCAGAGGAGGGGCCCTCCCCGCTCAGCATCTCAGTAGGACCACGCCAGTCCGGCC-CGACCAGAGTGACCTTCAGGGGACTGACCTTGGATGGGTGTTAAACCGCCCTATTCCACAGCCCT-C--CCAGAGGCTCTGACTTAGTACTTAGCAAGGGGCTGAGGGATTCTTCATTCATAGAA--ATGCTCCCAGGT----A-----ATAGTCGGACCGTTTCTGGAAGCACTAAGTTA----------------------T-TGAACTGTAAGCACTCATTGGCATCAGATGCTGTATAGGCTGTCTCCTCAAAGTGTATAAAATGGGA-TAAAAACTAAA-TGAAACTGG---ATTAAAACATTCTAAAAAA-AGTGTTGAGTTTGGGGTTGATGCCTCAAATTGGTGATTATAAGAACAAAATTTCACTAGGATCTTAGAAT i cerAty1.NW_012002071v1 I 1 I 300 s chlSab2.chr13 96650173 645 + 98384682 TAGAAATATCTTTTC-----------AAGG----------CCAGAGCCTGTGTGGTTTCTCCTCCTTAACAGAAACACTGAATGACATAACTGTGTGTTTGGGACAACATCCTTTATAAGGGTTCCCCGTCTGTCAATTAAGAAAGTGGTTCCATGAAAACACATCC-----TTTGTTTTATGAGCAGAATCAGAGATT-CCGGGGAGAAACAGGACCCAGGGAGATGAGAGCTTTCAGAGATACCAGAGAGCTTGG-----------------------CTGGTCTGGG------TGTGAGGCCAGAGGAGGGGCCCTCCCTGCTCAGCATCTCAGTAGGACCACGCCAGTCCGGCC-CGACCACAGTGACCTTCAGGGGACTGACCTTGGATGGGTGTTAAACCCCCCTATTCCACAGCCct-c--ccagaggctctgacttagtacttagcaaggggctgagggattcttcattcatagca--atgctcccaggt----a-----atAGTCGGACAGTTTCTGGAAGCACTAAATTA----------------------T-TGAATTGTAAGCACTCATTTGCATCAGATGCTGTATAGGCTGTCTCCTCAAAGTGTACAAAATGGGA-TAAAAACTAAA-TGAAAGTGG---ATTAAAACATTCT-AAAAA-TGTGTTGACTTTGGGGTTGATGCCTCAAATTTGTGATTATAAGAACAAAATTTCACTAGGATCTTAGAat i chlSab2.chr13 I 1 I 351 s manLeu1.NW_012106474v1 8194953 646 - 10857215 TAGAAATATCTTTTC-----------AAGG----------CCAGAGCCTGTGTGGTTTCTCCTCCTTAACACAAACACTGAATGACATAACTGTGTGTTTGGGACAACATCCTTTATAAGGGTTCCCCGTCTGTCAATTAAGAAAGTGGTTCCATGAAAACACATCC-----TTTGTATTATGAGCAGAATCAGAGATT-CCGGGGAGAAACAGGGCCCAGGGAGATGAGAGCTTTCAGAGATACCGGAGAGCTTGG-----------------------CTGGTCTGGG------TGTGAGGCCAGAGGAGGGGCCCTCCCCGCTCAGCATCTCAGTAGGACCACGCCAGTCCGGCC-CAACCACAGTGACCTTCAGGGGACTGACCTTGGATGGGTGTTAAACCCCCCTATTCCACAGCCct-c--ccagaggctctgacttagtacttagcaaggggctgagggattcttcattcatagca--atgctcccaggt----a-----atAGTCGGACCGTTTCTGGAAGCACTAAATTA----------------------T-TGAATTGTAAACACTCATTGGCATCAGATGCTGTATAGGCTGTCTCCTCAAAGTGTATAAAATGGGA-TAAAAACTAAA-TGAAAGTGG---ATTAAAACATTCTAAAAAA-AGCGTTGAGTTTGGGGTTGATGCCTCAAATTGGTGATTATAAGAACAAAATTTCACTAGGATCTTAGAAT i manLeu1.NW_012106474v1 I 1 I 291 s colAng1.NW_012114488v1 15589137 644 - 23502949 TGGAAATATCTTTCC-----------AAGG----------CCAGAGCCTCTGTGGTTTCTCCTCCTTAACACAAACACTGAATGACATGACTGTGTGTTTGGGACAACATCCTTTATAAGGGTTCCCCGTCTGTCAATTAAGAAAGTGGTTCCATGAAAACACATCC-----TTTGTTTTATGAGCAGAATCAGAGATT-CCGGGGAGAAACAGGACCCAGGGAGACGAGAGCTTTCAGAGATA-GGGAGAGCTTGG-----------------------CTGGTCCAGG------TGTGAGGCCAGAGGAGGGGCCCTCCCCACTCAGCATCTCAGTAGGACCACACCAGTCCGGGC-CGACCACAGTGACCTTCAGGGGACTGACcttggatgggtgttaaacc-ccctgttccacagccct-c--ccagaggctctgacttagtacttagcaaggggctgagggattcttcattcatagca--attctcccaggt----a-----atAGTCGGACAGTTTCTGGAAGCACTAAATTA----------------------T-TGAATTGTAAGCACTCATTTGCATCAGATGCTGTATAGGCTGCCTCCTCAAAGTATATAAAATGGGA-TAAAAACTAAA-TGAAAGTGG---ATTAAAACATTCTAAAAAA-AGTGTTGAGTTTGGGGTTGATGCCTCAAATCGGTAATTATAAGAACAAAATTTCACTAGGATCTTAGAAT i colAng1.NW_012114488v1 I 1 I 305 s calJac3.chr4 169859028 626 + 171630274 TAGAAATATATTTTT-----------AAGG----------CTGGTGCCTCTACGGCTTTTCCTCC---ACACAAACACTGAATGACGTAACTGTGTGTTTGGGAAAACACCCTTTAGAAGAGTTCCCTGTCTGTCAATTAAGAAAGTGGTTCCCTGAAAACACATCC-----TTTGTTTCCCGAGCAGAATGAGAAACT-CAGGGGAGAAACAGAGCCCAGGGAGATGGGAGCTTTCAGAGATACTGG---------------------------------------------------------AGAGGAGGGACCTTCACCCCTCAGCGTCTCAGTAGGACCATGCCAGTCCTGCC-CCACCACAGTGACCTTCAAGGAACTGACCTTGGACTGGTGTTAAAACTCCCTGTTCCACAGCCCC-T--CCCGAGGTTCTGACTGACTGCTTAGCGA-GGGCTGGGGG-----------ATAGCA-AATGCTCCCAGGT----A-----ACAGTCAGACCGTTTGTGAAAGCACTGAATTATTTCACTGTAAGCACGGAACTGT-TGAATTGTAAGCACTCGTTCGCCTCGGATGCTGCGTAGGCTCCCCCCTCAAAGTGTATAAAATGGGATTAAAAACTAAA-TGAAGGTGG---ATTAAAACATGAC-AAAAA-AGTGTTGAGTTCTCGGTTGATGCCTCAAGTCAGTGATTATGAGAACAAAATTTCAATAGGATCTTAGAAT i calJac3.chr4 I 1 C 0 s saiBol1.JH378287 1272085 653 - 2905041 TGGAAATATATTTCC-----------AAGG----------CTGGTGCCTCTTTGGTTTTTCCTCCTTAACACAAACACTGAATGACGTAAATGTGTGTTTTGGAAAACACCCTTTATAAGAGTTCCCTGCCTGTCAGTTAAGAAAGTGGGTCCATGAAAACACATCC-----TTTTTTTCATGAGCAGAATGAGAAATT-CAGGGGAGAACCAGAGCCCAGGGAGATGGGAGCTTTCAGAGATACCGGAGAGCTTGG-----------------------CTGATCTGGG------TGCGAGGCCAGAGGAGGGACCCTCCCCTCTCCGCGTCTCAGTAGGACCAGGCTAGTCCTGCC-CAACCACC-TGACCCTCAGGGAACTGACCTTGGACTGGTGTTAAAACTCCCTGTTCCACAGCCCC-T--CCCGAGGTTCTGACTTACTGCTTAGCAAGGGGCTGAGGG-----------CTAGCA-CATGCTCCCAGGT----A-----ACAGTTGGACAGTTTGTGAAAGCACTGAATTA---AATTGTGCACACCAAACTGT-TGAATTGTAAGCACTCGTTCGCCTCGGGTGCTGCATAGGCTCTCTGCTCAAAGTGTATAAAATGGGATTAAAAACTAGA-TGAAGGTGG---ATTAAAACATGAC-AAAAA-AGTGTTGAGTTCTGGGTTGATGCCTCAAATCAGTGATTATGAGAACAAAATTTCAA-AGGATCTTAGAAT i saiBol1.JH378287 I 1 C 0 s cebCap1.NW_016107695v1 1229137 657 - 2164891 TGGAAATATATCTTC-----------AAGG----------ATGGTGCCTCTATGGTTTTTCCTCCTTAACACAAACACTGAATGACATAACTGTGTGTTTGGGAAAACACCCTTTTTAAGAATTCCCTGTCTGTCAATTAAGAAAGTGGTTCCATGAAAACACATCC-----TTTGTTTCACGAGCAGAATGAGAAATT-CAGGGGAGAAACAGGGCCCAGGGAGACGGGGGCTTTCAGAGATACTGGAGAGCTTGG-----------------------CTGATCTGGG------TGCGAGGCCAGAGGAGGGACCTTCACCCCTCAGCGTATCAGTAGGACCACGCCAGTGCCGCC-CAACCACTGTGACCTTCAGGGAACTGACCTCGGACTGGTGTTAAAGCTCCCTGTTCCACAGCCCC-T--CCTGAGGTTCTGACTTACTACTTAGCAAGGGACTGAGGG-----------ATAGCA-AATGCTCCCAGGT----A-----ACAGTCGGACAGTTTGTGAAAGCACTGAATTATTTAATTGTAAGCACTGAACTGT-TGAATTGTAAGCACTCGTTTGCCTCGGATGCTGCATAGCCTCCCCCCTCAAAGTGTATAAAATGGGATTAAAAACTAAA-TGAAGGTGG---ATTAAAACATGAC--AAAA-AGTGTTGAGTTCTGGGTTGATGCCTCAAATCAGTGATTATGAGAACAAAATTTCAATAGGATCTTAGAAT i cebCap1.NW_016107695v1 I 1 C 0 s aotNan1.NW_018494782v1 1483013 634 - 1813869 TAGAAATATATTTTC-----------ACTA----------CTGGAGCCTCTATGGTTTTTCCTCCTTGA-ACAAACACTGAATGACATAACTGTGTGTTTGGGAAAACACCCTTTATAAGAGTTCCCTGTCTGTCAATTAAGAAAGTGGTTCCATGAAAACACATCC-----TTTGTTTCACGAGCAGAATGAGAAATC-CAGGGGAGAAACAGATCCCAGGGAGACGGGAGCTTTCAGAGGCACTGGAGAGCCTGG-----------------------CTGATCCGGG------TGCGAGGCCAGAGGAGGGACCTTCACCCCTCAGCGTCTCGGTAGGACCACGCCAGCCCTGCC-CAGCCACAGTGACCTTCAGGGAACTGACCTTGGACTGGTGTTAAAACTCCGTGTTCCACAGCCCC-T--CCCGGGGTTCTGACTTACTACTTAGCAAGGGGCTGAGGG-----------ATAGCA-AATGCTCCCAGGT----A-----ACAGGCAGACAGCTTGTGAAAGCACTGAGTTA----------------------T-TTAACTGTAAGCACTGGTTCGCCTCAGATGCTGCATCGCCTCCCCCCTCAAAGTGTATAAAATGGGATTAAAAACTAAA-TGAAGGTGG---ATTAAAACATGAC-AAAAA-AGTGTTGAGTTCTGGGTTGATGCCTCAAATCAGTGATTATGAGAACAAAATTT-AACAGGATCTTAGAAT i aotNan1.NW_018494782v1 I 1 C 0 s otoGar3.GL873575 10933429 569 - 12073884 TGGACACATCTCTTT-----------AAGGGTAAAAATGACTCGCGTCTCTTTGGCTGTTACTC----------ACA-----------------------GGGAAAACA------------------CGTCTCCTGATTAACCAGGTGGCTCAGCCAAAAAATGTCT-----TTTGTTTTTAGGGTAGAACTGGAAATT-CAGGG--GAAACAGATCCCAGGGTGACGGGTGCTTTCAAAGGCCCCAGAGTGCTTG-----------------------------TTGAT------TGCCCAGACAGGTCAGGACCCCC----------AGGCTGTGGTGGGCCATG-TAGTCCGGCC-TCACTTCAGTGCCGCTCAGGCGGTGG----TGGACCAGAGTTGAATTCCCCTGTTCCAGGGCCCTCC--CCGGAGGCTCTGATTTAATATGTCCTAAGGAATCCGGGGGCTCTTCACTGATGACAGAACGTTCCCTGGT----A-----C---TTTGACAGTTTCTGG-AGCATTAAACTG----------------------C-TGATCTTCAAGCACTTGCTCA-ACAATGTGTGGGGCAGCCTGGCCATCCTGCGT-----------GA-TGATACCCAGC-TCAGGGCGG-TCAGCAGAGCACGCC-AAACC-AGCGCTGGGTT-GGAGTTGACCCCTCAAATCAATGATTATAAGAACGAAATTTTACTATAATTTTAAAAC i otoGar3.GL873575 I 1 C 0 s canFam3.chr1 56156480 563 + 122678785 TAGAAATATCGTTTG-----------AAGGGTAAACACGGCCAGAGCCTCAAAGGCTGTTCCGCATTAACCCAG-CGCTGGAGTCGATAACCACCCGCTCAGGAAAACATCGTTTGTGTGAGGTCTCTGTCTCTTGATTAACACAGCGGTTCGGTGCAAA-GTGTTTGTTTGTTTGTTTTAAGGACAGAATTGGGACTT-CTGGAGGGAGCAGAGTGCAGGGGGGACGGTGGTTTTCAGCGACAC--GGGAGCCTG------------------------CCAGCGTGGG------CGCCAGGCC-----------------------------CGGCGGGACCGCA-CGGTGCTGCC-CAAGCA---------TCAG-----CGACCCTGG--------------TCACTGTTCAACCCGCCT----------------------------------GACTGGGGGCCTCCTGAT-------G--GGGCCCCCAGCTATTCA-----ATGGTTGGGCAACCTTTGGAAACGTTGACCC-----------------------C-TGAATT-CACGCATCCGTCCATCTCAGACGATGGGCAGGCCGCCCCTTCTGAGGACATCG-GTGGAT-GAGAAGTGAAG-TGAAGGAGGGTAACTAACGTGCGCT-AAGCA-AGCAGTGGGGTTTGAGTTGGTGCCTCCTAGGAGTGATTGGAAGAATAGAACCTCACGAGGATCTTAGGAA i canFam3.chr1 I 1 C 0 s dasNov3.JH569188 538011 670 + 760995 TAGAAATATCTTTTTTAGCATAAAAAATGG----------CCAGAGTCTTTATGACTATTACCTAGTAAAACAT-CACTAGCTTAAATAACTTCATGATTGGAAAAA-ATCCTTTACACTAGTTCTCTGTCTCTTGATTAACAGAGTGGTTCAATGCAAA-ATACAC-----TTTGTTTTAAGGATGGAATCATAAATT-CTGGAGA-AAGCAGAGCCCAAGGTGACTAGAGCTTTCCAAGACACATGAAAGTATGGTGATTGTCTAGACGGGGAGATGACAAATCTGAG------GGCTAAGCCAGATGGATGATCCTTTCATCTCAGCATTTCTGTTGGACTGGATCAGTTTTGCCTTAACTTGAGTGATCTT---ATAAATTGCCTTTAATCATCATTCAAACTCC-TATTCCAAGATCTT-TTGCTTAGGACTCTGATTCTGTATGCC-----------AGGGATTCTTCATTTAAAAAA-AATTCTTGCAAAT----ATTTTGATGATTGGGCAACTTATGGAAACTGTAAACTA----------------------CATAATTTTTAAGAATTTATTGAGCTCAGATGTTCTACAGTCTGTCCTTTCAAAGTATATAA-GTGGGA-GGAAAACTAAGCTGAAGGCAG---ATTAATACATTTTAAGAAA-GGTTTTG-CTTTTGAGTTGATGCCTCAAATTAATGACTATAAGCATAAAATTTCACCAAGAACTTGTAAT i dasNov3.JH569188 I 1 C 0 a score=702371.000000 s hg38.chr6_KB021644v2_alt 82983 62 + 185823 AAATCCATGTTTTGACAAAGAACTTGAGAAAAGGCTGATATAAAGTAAATG-CTTTGCATTTC s panTro5.chr6 173535460 62 + 175400573 AAATCCATGTTTTGACAAAGAACTTGAGAAAAGGCTGATATAAGGTAAATG-CTTTGCATTTC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171774182 62 + 173848474 AAATCCATGTTTTGACAAAGAACTTGAGAAAAGGCTGATATAAGGTAAATG-CTTTGCATTTC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11456048 62 - 12463322 AAATCCATGCTTTGACAAAGAACTTGAGAAAAGGCTGATACAAGGTAAATG-CTTTGCATTTC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156283380 62 + 157873769 AAATCCATGTTTTGACATAGAACTTGAGAAGAGGCTGATATAGGGTAAATG-CTGTGTATTTC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170309589 62 + 172585720 AAATCCATGTTTTGACACAGAACTTGAGAAAAGGCTAATATAAGGTAAATG-CTTTGTATTTC i rheMac8.chr4 I 300 C 0 s macFas5.chr4 169055427 62 - 170955103 AAATCCATGTTTTGACACAGAACTTGAGAAAAGGCTAATATAAGGTAAATG-CTTTGTATTTC i macFas5.chr4 I 301 C 0 s macNem1.NW_012011000v1 8342127 62 + 10161646 AAATCCATGTTTTGACACAGAACTTGAGAAAAGGCTAATATAAGGTAAATG-CTTTGTATTTC i macNem1.NW_012011000v1 I 303 C 0 s cerAty1.NW_012002071v1 1372666 62 + 3144229 AAATCCATATTTTGACACAGAACTTGAGAAAAGGCTGATATAAGGTAAATG-CTTTGTATTTC i cerAty1.NW_012002071v1 I 300 C 0 s chlSab2.chr13 96651169 62 + 98384682 aaatccatatTTTGACACAGAACTTGAGAAAAGGCTGATATAAGGTAAATG-CTTTGTATTTC i chlSab2.chr13 I 351 C 0 s manLeu1.NW_012106474v1 8195890 62 - 10857215 AAATCCATATTTTGACACAGAACTTGAGAAAAGGCTGATATAAGGTAAATG-CTTTGTATTTC i manLeu1.NW_012106474v1 I 291 C 0 s colAng1.NW_012114488v1 15590086 62 - 23502949 AAATCCATATTTTGACACAGAACTTGAGAAAAGGCTGATATAAGGTAAATG-CTTTGTATTTC i colAng1.NW_012114488v1 I 305 C 0 s calJac3.chr4 169859654 62 + 171630274 GCATCCATGTTTTGACACAGAACTTGAAAAAAGGCTGATGTATGGCAAATA-CTTTGTATTTC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1272738 62 - 2905041 ATATCCATGCTGTGACACAGAACTTGAAAAAAGGCTGATATATGGCTAATG-CTTTGTATTTC i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1229794 62 - 2164891 ACATCCATGTTTTTACACAGAACTTGAAAAAAGGCTGATATATGGCAAATA-CTTTGTATTTC i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1483647 60 - 1813869 ACATCCATGTTTTGACAC--AACTTGAGAACAGCCTGATATGTGGCAAATG-CTTTGTATTTC i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10933998 61 - 12073884 ATATCCATG-TTTGGCCTGGAAATTGAGACAAGCCTGAAATAAGGTAGAGG-TTTTGCATTTC i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56157043 62 + 122678785 GTTTCCTCGTGTGGACACACAGGTTGAGACAAGCCTGCTATGAGGCGAAGG-GTTTGGAATTC i canFam3.chr1 C 0 I 382 s dasNov3.JH569188 538681 63 + 760995 TTATCCACTTCTTGATAATGAACTTGAAACAAGCCTGATATATTATAAAAGACTTTCGATTTC i dasNov3.JH569188 C 0 C 0 a score=2094059.000000 s hg38.chr6_KB021644v2_alt 83045 254 + 185823 TTCAGGATAATAA-TT-TTGAGCAGCAATGAGTTC------------------------------------------------TGTTGAAGCAGAAGGTCTGTGAGTTTTCCCAGTGAGCTGG-GGAGCTGGGC-----------CAGAG-CCCAGAGGCAGCACC-CGGCCCTAGGGGG-----------------GGCCTCTCC----CTGGAGACCGGCCGCCCTGCCCAACGTGGGCAGCCCTATTCGGTCACTGTCATGAAGACGTTTGCATAGTTCCTCTT-CCTTTGAAGGATTTCCCTCACATGCTCTATGGAGAAATGTTTAGATaagaaa s panTro5.chr6 173535522 254 + 175400573 TTCAGGATAATAA-TT-TTGAGCAGCAATGAGTTC------------------------------------------------CGTTGAAGCAGAAGGTCTGTGAGTTTTCCCAGTGAGCTGG-GGAGCTGGGC-----------CAGAG-CCCAGAGGCAGCACC-CGGCCCTCGGGGG-----------------GGCCTCTCC----CTGGAGACCGGCCGCCCTGCCCAACGTGGGCAGCCCCATTCGGTCACTGTCATGAAGACGTTTGCATAGTTCCTCTT-CCTTTGAAGGATTTCCCTCACATGCTCTATGGAGAAATGTTTAGATaagaaa i panTro5.chr6 C 0 C 0 s panPan2.chr6 171774244 254 + 173848474 TTCAGGATAATAA-TT-TTGAGCAGCAATGAGTTC------------------------------------------------CGTTGAAGCAGAAGGTCTGTGAGTTTTCCCAGTGAGCTGG-GGAGCTGGGC-----------CAGAG-CCCAGAGGCAGCACC-CGGCCCTCGGGGG-----------------GGCCTCTCC----CTGGAGACCGGCCGCCCTGCCCAACGTGGGCAGCCCCATTCGGTCACTGTCATGAAGACGTTTGCATAGTTCCTCTT-CCTTTGAAGGATTTCCCTCACATGCTCTATGGAGAAATGTTTAGATaagaaa i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11456110 254 - 12463322 TTCAGGATAATAA-TT-TTGAGCAGCAATGAGTTC------------------------------------------------CGTTGAAGCAGAAGGTCTGTGAGTTTTCCCAGTGAGCTGG-GGAGCTGGGC-----------CAGAG-CCCAGAGGCAGCACC-CGGCCCTAGGGGG-----------------GGCCTCTCG----CTGGAGACCGGCCGCCCTGCCCAACGTGGGCAGCCCCATTAGGTCACTGTCATGAAGACGTTTGCATAGTTCCTCTT-CCTTTGAAGGATTTCCCTCACATGCTCTATGGAGAAATGTTTAGATAAAAAA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156283442 254 + 157873769 TTCAGGATAATAATTT-TTGAGCAACCATGAGTTC------------------------------------------------CGTTGAAGCAGAAGGTCTGTGAGTTCTTCCAGTGAGCTGG-GGAGCTGGGT-----------CAGAGCCCCAGAGGCAGCACCTCGGCCTT--GGGG-----------------GTTCTCTCC----CCGAAGACCGGCCA-CCTGCCCAACGCGGGCAGCCCCATTCAGTCACTGTCATGAAGACGTTCGCATAGTTCCTCTT-CCTTTGAAGGATTTCCCTCACATGCTCTATGGGGAAATGTTTAGATAAGAGA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170309651 228 + 172585720 TTCAGGAGAATAA-TT-TTGAGCAACCATGAGTTC------------------------------------------------TGTTGAAGCAGAAGGTCTGTGAGTTCTCCCAGTGAGTTAG------------------------GAG----------AGCACC-CGGCCCT---GGG-----------------GGCCTCTCC----CCGGAGACTGGCCACCCCACCCAACATGGGCAGCCCCATTCGGTCACTGTCATGAAGACGTTCACATAGTTCCTCTT-CCTTTGAAGGATTTCCCTCACATGCTCTATGGGGAAATGTTTAGATAAGA-- i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169055489 228 - 170955103 TTCAGGAGAATAA-TT-TTGAGCAACCATGAGTTC------------------------------------------------TGTTGAAGCAGAAGGTCTGTGAGTTCTCCCAGTGAGTTAG------------------------GAG----------AGCACC-CGGCCCT---GGG-----------------GGCCTCTCC----CCGGAGACTGGCCACCCCACCCAACATGGGCAGCCCCATTCGGTCACTGTCATGAAGACGTTCACATAGTTCCTCTT-CCTTTGAAGGATTTCCCTCACATGCTCTATGGGGAAATGTTTAGATAAGA-- i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8342189 228 + 10161646 TTCAGGAGAATAA-TT-TTGAGCAACCATGAGTTC------------------------------------------------TGTTGAAGCAGAAGGTCTGTGAGTTCTCCCAGTGAGTTAG------------------------GAG----------AGCACC-CGGCCCT---GGG-----------------GGCCTCTCC----CCGGAGACTGGCCACCCCACCCAACATGGGCAGCCCCATTTGGTCACTGTCATGAAGACGTTCACATAGTTCCTCTT-CCTTTGAAGGATTTCCCTCACATGCTCTATGGGGAAATGTTTAGATAAGA-- i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1372728 229 + 3144229 TTCAGGAGAATAA-TT-TTGAGCAGCCATGAGTTC------------------------------------------------TGTTGAAGCAGAAGGTCTGTGAGTTCTCCCAGTGAGTTAG------------------------GAG----------AGCACC-CGGCCCT--GGGG-----------------GGCCTCTCC----CCGGAGACCGGCCACCCCACCAAACATGGGCAGCCCCATTCGGTCACTGTCCTGAGGACGTTCGCATAGTTCCTCTT-CCTTTGAAGGATTTCCCTCACATGCTCTATGGGGAAATGTTTAGATAAGa-- i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96651231 229 + 98384682 TTCAGGAGAATAA-TT-TTGAGCAGCCATGAGTTC------------------------------------------------TGTTGAAGCAGAAGGTCTGTGAGTTCCCCCAGTGAGTTAG------------------------GAG----------AGCACC-CGGCCCT--GGGG-----------------GGCCTCTCC----CCGGAGACCAGCCACCCCACCAAACATGGGCAGCCCCATTCGGTCACTGTCCTGAAGACGTTCGCATAGTTCCTCTT-CCTTTGAAGGATTTCCCTCACATGCTCTATGGGGAAATGTTTAGATAAGA-- i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8195952 229 - 10857215 TTCAGGAGAATAA-TT-TTGAGCAGCCATGAGTTC------------------------------------------------TGTTGAAGCAGAAGGTCTGTGAGTTCTCCCAGTGAGTTAG------------------------GAG----------AGCACC-TGGCCCT--GGGG-----------------GGCCTCTCC----CAGGAGACCGGCCACCGCGCCCAACATGGGCAGCCCCATTCGGTCACTGTCATGAAGACGTTCGCATAGTTCCTCTT-CCTTTGAAGGATTTCCCTCACATGCTCTGTGGGGAAATGTTTAGATAAGA-- i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15590148 229 - 23502949 TTCAGGAGAATAA-TT-TTGAGCAACCATGAGTTC------------------------------------------------TGTTGAAGCAGAAGGTCTGTGAGTTCTCCCAGTGGGCTAG------------------------GAG----------AACACC-CGGCCCT--GGGG-----------------GGCCTCTCC----CCGGAGACCAGCCACCCTGCCCAACATGGGCAGCCCCGTTCGGTCACTGTCATGAAGACGTTCGCATAGTTCCTCTT-CCTTTGAAGGATTTCCCTCACATGCTCTATGGGGAAATGTTTAGATAAGA-- i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169859716 241 + 171630274 TTTGGTATAATAG-TT-TTGAGCAACTGTGAGTTC------------------------------------------------CGGTGAAGCAGAAGTTCCATGAGTTCTCCCAGTGAGCTGGGGGAGCGGGGC-------------GAG----------AGCACC-CGGCCCT--GGA------------------GGCCTCTCC----CCGGAGGCCGGCCACCCTGCCCAACGTGGGCAGCCCCATTCGTTCAGTGTCGTGAAGACGTTTGCGTAGTTCCTCTT-CCTTTGAAGGATTTTCCTCGCATGCTTCATGGGGAAATGTTTAGATAAGAAA i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1272800 240 - 2905041 TTC-TTATAACAG-TT-TTGAGCAAGTATGAGTTC------------------------------------------------CACTGAAGCAGAAGTTCTGTGAGTTCTCCCAGTGAGCTGGGGGAGCTGGGC-------------CAG----------AGCACC-GGGCCCC--GGAG-----------------GGCCTCTCC----CCGCGGGCCGGCCACCC-GCCCAACGTGGGCAGCCCCATTCGTTCACTGTCGTGAAGACATTTGCATAGTTTCTCTT-CCTTTGAAGGATTTTCCTCACATGCTTCATGGGGAAATGTTTAGATAAGAAA i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1229856 242 - 2164891 TTTAGTATAATAG-TT-TTGAGCAACTATGAGTTC------------------------------------------------CACTGAAGCATAAGTTCCGTGAGTTCTCCCAGTGAGCTGGGGGAGCTGGGC-------------CAG----------AGCACC-CAGCCCT--GGAG-----------------GGCCTCTTC----CCGGAGGCCGGCCACCCTGCCCAATGTGGGCAGCCCTATTCGTTCACTGCCGTGAAGACGTTTGCCTAGTTCCTCTT-CCTTTGAAGGATTTTCCTCACATGCTTCCTGGGGAAATGTTTAGAGAAGAAA i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1483707 243 - 1813869 TTCAGTATGACAG-TT-TTGAGCAACTCTGAGTCC------------------------------------------------TGCTGAAGCAGAAGTTCCGTGAGTTCTCCCGGTGAGCTGGGGGAGCTGGGC-------------CAG----------AGCGCC-CGGCCCT--GGAG-----------------GGCCTCTCC----CCGGAGGCCGGCCACCCTGCCCAACGTGGGCAGCCCCATTCATTTATTGTCGTGAAGACATTTGCGTAGTTCCTCTTCCCTTTGAAGGATTTTCCGCACATGCTTcatggggaaatgtttagataagaaa i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10934059 165 - 12073884 TTTAGTACAATAA-TT-TGAAGCAACTGTCCGGTC------------------------------------------------AGTTGAAACCAA-------------CTCCCA-CGAGCTGG------------------------GGG--------------GC-CATGCCT------------------------GCCTCTC---------AGCTGGGCCCCCTCACC-----------------------CATTGCCAGGAA---------------CATCTC-TGTCTGAAGGATTTTCCTAACAGACTCCCTGAGGGAACGTTCAGGTAAGAAA i otoGar3.GL873575 C 0 I 794 s dasNov3.JH569188 538744 318 + 760995 ACCAGTATGATAA-CTGTGGGGCAGTGATGAGGTCAACTTGGAAAATGGTCCAATGGTTACACGGCTAATAGTACCACAAAAGTATTAAAAAAACATGGCTGCAATTGTTACTTCTGAGTTGT-GTCTTTGGTCATACTGTACTATACAG----------ATCCTT-CTTCTCT--GGTGCCCATTGTCAGAACTGTGACCTTTTCTCCTCCTGATACTGGATATAT----CATGGTGTGCAGTCCT-CTCACTTGCTGCAATAAAGACATGTGCATAGT-CTTCTT-TGTTGTAAGGATTTTCCTAAAAATCTTTATAAGGAATTGTTTAGATAACAAA i dasNov3.JH569188 C 0 C 0 e canFam3.chr1 56157105 382 + 122678785 I a score=12671.000000 s hg38.chr6_KB021644v2_alt 83299 2 + 185823 ga s panTro5.chr6 173535776 2 + 175400573 ga i panTro5.chr6 C 0 C 0 s panPan2.chr6 171774498 2 + 173848474 ga i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11456364 2 - 12463322 GA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156283696 2 + 157873769 Ga i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170309879 1 + 172585720 -A i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169055717 1 - 170955103 -A i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8342417 1 + 10161646 -A i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1372957 1 + 3144229 -a i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96651460 1 + 98384682 -A i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8196181 1 - 10857215 -A i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15590377 1 - 23502949 -A i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169859957 2 + 171630274 AA i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1273040 2 - 2905041 GA i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1230098 2 - 2164891 GA i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1483950 2 - 1813869 ga i aotNan1.NW_018494782v1 C 0 C 0 s dasNov3.JH569188 539062 2 + 760995 AA i dasNov3.JH569188 C 0 I 648 e otoGar3.GL873575 10934224 794 - 12073884 I e canFam3.chr1 56157105 382 + 122678785 I a score=1708459.000000 s hg38.chr6_KB021644v2_alt 83301 205 + 185823 agatgggccaggtgcagtggttcatgcctgtagtcccagcactttgggaggctgaggtgggaggatcacttgcgcctgggaggtcaaggctgcagtgagctatgattgcaccactgcactccagcctgggtgacagagcgagactgtgtctc------aaaaaagaaaaagaaagaagaagaagaaaagaggaagaagaagaagaagagga------ s panTro5.chr6 173535778 202 + 175400573 agatgggccaggtgcagtggttcatgcctgtagtcccagcactttgggaggctgaggtgggaggatcacttgcgcctgggaggtcaaggctgcagtgagctatgattgcaccactgcactccagcctgggtgccggagcgagactgtgtctc------aaaaaagagaaagaaagaagaagaagaaaagaggaagaggaagaaga---gga------ i panTro5.chr6 C 0 C 0 s panPan2.chr6 171774500 202 + 173848474 agatgggccaggtgcagtggttcatgcctgtagtcccagcactttgggaggctgaggtgggaggatcacttgcgcctgggaggtcaaggctgcagtgagctatgattgcaccactgcactccagcctgggtgccggagcgagactgtgtctc------aaaaaagagaaagaaagaagaagaagaaaagaggaagaggaagaaga---gga------ i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11456366 205 - 12463322 AGACGGgccaggtgcagtggttcatgcctgtagtcccagcactttgggaggctgaggtgggaggatcacttgcacctgggaggtcaaggctgcagtgagctatgattgcaccactgcactccagcctgggtgacggagcgagactgtgtctc------aaaaaagaaaaagaaagaagaagaagaaaagaggaagaagaagaagaGGAGGA------ i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156283698 201 + 157873769 agatgggccaggtgcagtggctcatgccggcagtcccagcac-ttgggaggctgaggtgggaggatcacttgaccctgagatgtcgaggctgcagtgagctttgattgcaccactgccctccagcctgggtgacggagcgagactgtgtctc------aaaaaagaaaaagaaagaagaagaagaaaaGAGGAATAAGAAGAAGA---GGA------ i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170309880 196 + 172585720 AGACAGgccagatgcagtggtttatgcctgtggtcccagcgctttgggaggctgaggtgggaggatcagctaagcctgggaggtcaaggctgcattgagccgtgattgcaccactgcactccagcctgggtgacggagcgaggctatgtctc------aaaatag------aaaaaagaagaagaagaaaaGAGGCAGAAGAAGA---GGA------ i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169055718 196 - 170955103 AGACAGgccagatgcagtggtttatgcctgtggtcccagcgctttgggaggctgaggtgggaggatcagctaagcctgggaggtcaaggctgcattgagccgtgattgcaccactgcactccagcctgggtgatggagcgaggctatgtctc------aaaatag------aaaaaagaagaagaagaaaaGAGGCAGAAGAAGA---GGA------ i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8342418 196 + 10161646 AGACAGgccagatgcagtggtttatgcctgtggtcccagcgctttgggaggctgaggtgggaggatcagctaagcctgggaggtcaaggctgcattgagccgtgattgcaccactgcactccagcctgggtgacggagcgaggctatgtctc------aaaatag------aaaaaagaagaagaagaaaaGAGGCAGAAGAAGA---GGA------ i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1372958 202 + 3144229 aaatgggccaggtgcagtggtttatgcctgtggtcccagcactttgggaggctgaggtgggaggatcagctaagcctgggaggtcgaggctgcagtgagctgtgattgcaccactgcactccagcctgggtgacggagtgaggctgtgtctc------aaaaaagaaaaaaaaaaaagaagaagaaaaAATGAGGAAGAAGAAGA---GGA------ i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96651461 198 + 98384682 AAACGACCCAGGTGCAGTGGTTTATG--------CTCAGCACTttgggaggctgaggtgggaggatcagctaagcctgggaggtcgagactgcagtgagccgtgattgtaccactgcactccagcctgggtgacggagcaaggctgtgtctcaaaaaaaaaaaaa--aaaaaaaaaagaagaagaaaaaaagaggaagaagaaga---gga------ i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8196182 197 - 10857215 AGACGGgccaggtgcagtggtttatgcctgtggtcccagcactttgggaggctgaggtgggaggatcagctaagcctgggaggtcgaggctgcagtgagctgtgattgcaccactgcactccagcctgggtgacggagcgaggctgtgtctc------aaaaaag--aaaaaaaaaagaagaagaaaaaaAGAG---GAAGAAGA---GGA------ i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15590378 200 - 23502949 AGACGGgccaggtgcagtggtttatgcctgtggtcccagcactttgggaggctgaggtgggaggatcagctaagcctgggaggtcgaggctgcagtgagctgtgatggcaccactgcactccagcctgggtgatggagcgaggctgtgtctc------aaaaaag--aaaaaaaaaagaagaagaaaaaaAGAGGAAGAAGAAGA---GGA------ i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169859959 202 + 171630274 AGACAGGGCAGGGGCAgtggctcaggcctgtagtcccagcactttgggaggctgaggtgggaggatcacttgagcctgggaggtcgaggctgcagtgagctgtgatttcaccactgcgttccatcctgggtggaggagaaagactgtgtctc------caaaaag--a--ataaaaagaagaagaaaacaaGAG--AGAAGAGGA---GGAGAAGAA i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1273042 199 - 2905041 AGACAGgccaggggtggtggctcacgcctgtagtcccagcactttgggaggctgaggtgagaggatcacttgagcccgggaggtcgagcctgcagtgagctgtgattgcaccaccgcactccatcctgggtggaggagcaagactgtgtctc------aaaaaag--a----aaaaaaaagaagaaaaGAGGA---AGAAGAAGA---GGAAGAGAA i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1230100 206 - 2164891 AGACAGgccaagggtggtggctcacgcctgtagtcccagcactttgggaggctgaggtgggaggatcacttgagcctgggaggtcgaggctgcagtgagctgtgattgagccactgcactccatcctgggtggaggaacaagactgtgtctc------aaaaaaa--aaaaaaaaaaaaagaagaaaaCAAgaggaagaagaaga---ggaggagaa i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1483952 198 - 1813869 agacaggccaggggtggtggctcacgcccgtagtcccagcactttgggaggctgaggtgggaggatcacgtgagcctgggaggtggaggctgcagggagctgtcattatagcactgcactccctcccgggtggaggagcaagac--tatctc------aaaaaag--a-----aaaagaagaagaaaacaagaggaagaaga-ga---ggaggagga i aotNan1.NW_018494782v1 C 0 I 67 e otoGar3.GL873575 10934224 794 - 12073884 I e dasNov3.JH569188 539064 648 + 760995 I e canFam3.chr1 56157105 382 + 122678785 I a score=478825.000000 s hg38.chr6_KB021644v2_alt 83506 64 + 185823 gtggaggaaagaaaagatgaCAAATGTGAGGATGTTGCTAGGGTTCCAGGACACATCTGAGGCT----- s panTro5.chr6 173535980 64 + 175400573 gtggaggagagaaaagatgaTAAATGTGAGGATGTTGCTAGGGTTCCAGGACACCTCTGAGGCT----- i panTro5.chr6 C 0 C 0 s panPan2.chr6 171774702 64 + 173848474 gtggaggagagaaaagatgaCAAATGTGAGGATGTTGCTAGGGTTCCAGGACACCTCTGAGGCT----- i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11456571 64 - 12463322 GTGGAGGAAAGAAAAGATGACAAATGTGAGGATGTTGCTAGGGTTCCAGGACACATCTGAGGCT----- i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156283899 64 + 157873769 GTGGCGGAAAGAAAAGATGACAAACGTGAGGATATTGCTGGGGTTCCAGGACACCTCTGAGGCT----- i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170310076 64 + 172585720 GTGGAGGAAAGAAAAGATGACAAAGGTGAGTATGTTGGTAGGGTTCCAGGACACATATGAGGCT----- i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169055914 64 - 170955103 GTGGAGGAAAGAAAAGATGACAAAGGTGAGGATGTTGGTAGGGTTCCAGGACACATATGAGGCT----- i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8342614 64 + 10161646 GTGGAGGAAAGAAAAGATGACAAAGGTGAGGATGTTGGTAGGGTTCCAGGACACATATGAGGCT----- i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1373160 64 + 3144229 GTGGAGGAAAGAAAAGATGACAAAGGTGAGGATGTTGGTAGGGTTCCAGGACACATCTGAGGCT----- i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96651659 64 + 98384682 gtggaggaaagaaaagatgaCAAAGGTGAGGATGTTGGTAGGGTTCCAGGACACATCTGAGGCT----- i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8196379 64 - 10857215 GTGGAGGAAAGAAAAGATGACAAAGGTGAGGATGTTGGTAGGGTTCCAGGACACATCTGAGGCT----- i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15590578 64 - 23502949 GTGGAGGAAAGGAAAGATGACAAAGGTGAGGATGTTGGTGGGGTTCCAGGACACATCTGAGGCT----- i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169860161 67 + 171630274 --GAAGGAAAGAACGGATGGCAAGCGTGGGGACGCTGCTACGCTGCCAGGACGTATCTGAGGCTGGCCT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1273241 67 - 2905041 --GGAGGAAAGAGCAGATGGCAAGTGTGGGGACGTCGCTCCGCGGCCAGGACGTATCTGAGGCCGGCCT i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1230306 67 - 2164891 --ggaggaAAGAACAGATGGCAAGTGTGAGGACGTTGCTACAGTGCCAGAACGTGTCTGAGGCTGGCCT i cebCap1.NW_016107695v1 C 0 C 0 e otoGar3.GL873575 10934224 794 - 12073884 I e aotNan1.NW_018494782v1 1484150 67 - 1813869 I e dasNov3.JH569188 539064 648 + 760995 I e canFam3.chr1 56157105 382 + 122678785 I a score=116881.000000 s hg38.chr6_KB021644v2_alt 83570 13 + 185823 G-----CAGTGCCCCTCG s panTro5.chr6 173536044 18 + 175400573 GGGCTGCAGTGCCCCTCG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171774766 18 + 173848474 GGGCTGCAGTGCCCCTCG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11456635 18 - 12463322 GGGCTGCAGTGCCCCTCG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156283963 18 + 157873769 GGGCTGCAGTGCCCCTCG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170310140 18 + 172585720 GGGCTGCAGAGCCCCTTG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169055978 18 - 170955103 GGGCTGCAGAGCCCCTTG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8342678 18 + 10161646 GGGCTGCAGAGCCCCTTG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1373224 18 + 3144229 GGGCTGCAGAGCCCGTCG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96651723 18 + 98384682 GGGCTGCAGTGCCCCTCG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8196443 18 - 10857215 GGGCTGCAGAGCCCCTCG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15590642 18 - 23502949 GGGCTGCAGAGCCCCTCG i colAng1.NW_012114488v1 C 0 I 158 s calJac3.chr4 169860228 13 + 171630274 -----GTGGGGCCCCTCG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1273308 9 - 2905041 -----GTGGGGCCC---- i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1230373 13 - 2164891 -----GTGGGGCCCCTCG i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1484217 13 - 1813869 -----GCGGGGCCCCTCG i aotNan1.NW_018494782v1 I 67 C 0 e otoGar3.GL873575 10934224 794 - 12073884 I e dasNov3.JH569188 539064 648 + 760995 I e canFam3.chr1 56157105 382 + 122678785 I a score=297418.000000 s hg38.chr6_KB021644v2_alt 83583 40 + 185823 ATGGGCACTGGAACCCCACACCGGTGCCTGGGGCTGTATT s panTro5.chr6 173536062 40 + 175400573 ATGGGCACTGGAACCCCACACCGGCGCCTGGGGCTGTATT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171774784 40 + 173848474 ATGGGCACTGGAACCCCACACCGGCACCTGGGGCTGTATT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11456653 40 - 12463322 ATGGGCACTGGAACCCCATACCGGTGCCTGGGGCTGTATT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156283981 40 + 157873769 ATGGGCGCTGGGACCCCACACCAGTGCCTGGGGCTGTATT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170310158 40 + 172585720 ATGGGCGCTGGTACCCTACACCCATGCCAGGGGCCGTATT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169055996 40 - 170955103 ATGGGCGCTGGTACCCTACACCCATGCCAGGGGCCGTATT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8342696 40 + 10161646 ATGGGTGCTGGTACCCTACACCCATGCCAGGGGCCGTATT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1373242 40 + 3144229 ATGGGCGCTGGTACCCTACACCCATGCCGGGGGCCGTATT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96651741 40 + 98384682 ATGGGCGCTGGTACCGTACACCCATGCCAGGGGCCATATT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8196461 40 - 10857215 ATGGGCGCTGGTACCCTCCATCCATGCCAGGGGCCGTATT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15590818 40 - 23502949 ATGGGCGCTGGTACCCTACACCCATGCCGGGGGCCGTATT i colAng1.NW_012114488v1 I 158 C 0 s calJac3.chr4 169860241 40 + 171630274 TTGGGTGCTGGGAACCCACACTTGCACCTGGGGTCATATT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1273317 40 - 2905041 TCGGGTGCCGGGAACAAACCCTCGCACCTGGGGTCATATT i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1230386 40 - 2164891 TTGGGTGCTGGGAACCCACACTCCCAGCTGGAGTCGTATT i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1484230 40 - 1813869 CTGGGTGCTGCGAACCCACACTCGCACCTGGGGTCGTATT i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10934224 794 - 12073884 I e dasNov3.JH569188 539064 648 + 760995 I e canFam3.chr1 56157105 382 + 122678785 I a score=1316458.000000 s hg38.chr6_KB021644v2_alt 83623 126 + 185823 TTAACCCCCATTCCCGTCCCCACTCACTTCCCCAGCTTCTCCTC--ATCCTGCCAAATGGAGAAGCACA--GTGGCCCCACCCCAGTACAGACCCCAAGAGATTGTC-AAGAA---CACAGA-GTCTTCACAAAG s panTro5.chr6 173536102 129 + 175400573 TTAACCCCCATTCCCGTCCCCACTCACTTCCCCAGCTTCTCCTC--ATCCTGCCAAACGGAGAAGCACA--GTGGCCCCACCCCAGTACAGACCCCAAGAGATTGTC-AAGAAGAACACAGA-GGCTTCACAAAG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171774824 129 + 173848474 TTAACCCCCATTCCCGTCCCCACTCACTTCCCCAGCTTCTCCTC--ATCCTGCCAAACGGAGAAGCACA--GTGGCCCCAACCCAGTACAGACCCCAAGAGATTGTC-AAGAAGAACACAGA-GGCTTCACAAAG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11456693 129 - 12463322 TTAACCCTCATTCCCGTCCCCACTCACTTCCCCAGCTTCTCCTC--ATCCCGCCAAACGGAGAAGCACA--GTGGCCCCACCCCAGTACAGACCCCAAGAGACTGTC-AAGAAGAACACAGA-AGCTTCACAAAG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156284021 129 + 157873769 TTAACCCTCATTCCTGTCTCCACTCACTTCCCCAGCATCTCCTC--ATCCTGCCAAACGGAGAAGCATA--GTGGCCCCACCCCAGTACAGACCCCAAGAGACTGTC-AAGAAGAACACAGA-GGCTTCACAAAG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170310198 129 + 172585720 TTAACCCTCATTCCCATCTCCACTCACTTCCCCAGCTTCTCCTC--ATCCTGCCAAACGGAGAAGCACA--GTGGCCCCACCCCAGAACAGACCCCAAGAGACGGTC-AAGAAGAACACAGA-GGCTTCACGAAG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169056036 129 - 170955103 TTAACCCTCATTCCCATCTCCACTCACTTCCCCAGCTTCTCCTC--ATCCTGCCAAACGGAGAAGCACA--GTGGCCCCACCCCAGAACAGACCCCAAGAGACGGTC-AAGAAGAACACAGA-GGCTTCACGAAG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8342736 126 + 10161646 TTAACCCTCATTCCCATCTCCACTCACTTCCCCAGCTTCTCCTC--ATCCTGCCAAACGGAGAAGCACA--GTGGCCCCACCCCAGAACAGACCCCAAGAGACGGTC----AAGAGCACAGA-GGCTTCACGAAG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1373282 129 + 3144229 TTAACCCTCATTCCCATCTCCACTCACTTCCCCAGCTTCTCCTC--ATCCTGCCAAACGGGGAAGCACA--GTGGCCCCACCCCAGAACAGACCCCAAGAGACTGTC-AAGAAGAACACAGA-GGCTTCACAAAG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96651781 129 + 98384682 TTAACCCTCATTCCCATCTCCACTCACTTCCCCAGCTTCTCCTC--ATCCTGCCAAACAGAGAAGCACA--GTGGCCCCACCCCAGAACAGACCCCAGGAGACTGTC-AATAAGAACACAGA-GGCTTCACGAAG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8196501 129 - 10857215 TTAACCCTCATTCCCATCTCCACTCACTTCCCCAGCTTCTCCTC--ATCCTGCCAAACGGGGAAGCACA--GTGGCCCCACCCCAGAACAGACCCCAAGAGACTGTC-AAGAAGAACACAGA-GGCTTCACAAAG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15590858 129 - 23502949 TTAACCCTCATTCCCATCTCCACTCACTTCCCCAGCTTCTCCTC--ATCCTGCCAAACGGAGAAGCACA--GTGGCCCCACCCCAGAACAGACCCCAAGAGACTGTC-AAGAAGAACACAGA-GGCGTCACGAAG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169860281 128 + 171630274 TTAACCCTCATTCCTGTCTCCATTCACTTCCCCAGCTTCTCCTC--ATCCTGCCAAACAGGGAAGCTGC--GCAGCCCTGCCCCAGTACAGACCCCA-GAGACTGTC-GAGGAGAACGCAGA-GGCTTCACCAAG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1273357 127 - 2905041 TTAACCCTCATTCCTGTCTCCACTCACTTCCCCAGCTTCTCCTC--ATCCTGCCAAACAGGGAAGCTCT--GTGGCCCTGCCCCAGTACAGACCCC--GAGACTGTC-GAGAAGAACGCAGA-GGCTTCACCACG i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1230426 128 - 2164891 TTAACCCTCATTCCTGTCTCCACTCCCTTCCCCAGCTTCTCCTC--ATCCTGCCAAACAGGGAAGCTCT--GTGGCCCTGCCCCAGTATAGACCCCA-GAGACTGTC-GAGAAGAACACAGA-GGCTTCACCAAG i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1484270 126 - 1813869 TTAACCCTCATTCCTGTCTCCACTCGCTTCCCCAGCTTCTCCTC--ATCCTGCCAA--AAGGAAGCTCC--GCGGCCTTGCCCCAGTACAGACCCCA-GAGACTGTC-GAGAAGAACACAGA-GGCTTCACCAAG i aotNan1.NW_018494782v1 C 0 C 0 s dasNov3.JH569188 539712 135 + 760995 TTAAACCTCATTCCTTTCTCCATCCTCTTCCCCCATTACCTCTCCGATCACGCCTAACGAAGAAGCACAAGATGGCCCCCTGCCAGCTCAGACTTAAAGAGAATATCCAGGAAGAATATACACGTCTCCACAAAG i dasNov3.JH569188 I 648 I 461 e otoGar3.GL873575 10934224 794 - 12073884 I e canFam3.chr1 56157105 382 + 122678785 I a score=2664620.000000 s hg38.chr6_KB021644v2_alt 83749 285 + 185823 CATTGCCTCAGGACCCTTGAGGGATGCGCGGCCCCTGAGCCCCTGACACACAGGGTGAGCTGGTAGGAAGCGAAGCCCGCAGGCGAGTCCTCCCCTGTCATTTCCAGGCAGGGCCTGCTCCGTTGGTCATTCCCACTGGTGGCTCAGGTGTAATACGCACTTCCAAAGAATCTCAGCCCATAGAAGAAGCTTGTCTCCCTGGAGGACAGGGTGGGTAACTGTCCAGAAA-CATGTGCACATGAGGTGTGGAGAGGAGGCTTTCCTGCCCAGCTTGGGATCTGCAGG s panTro5.chr6 173536231 285 + 175400573 CATTGCCTCAGGACCCTTGAGGGATGCGCGGCCCCTGAGCCCCTGACACACAGGGTGAGCTGGTGGGAAGCGAAGCCCGCAGGCGAGTCCTCCCCTGTCATTTCCAGGCAGGGCCTACTCCGTTGGTCATTCCCACTGGTGGCTCAGGTGTAATACGCACTTCCAAAGAATCTCAGCCCATAGAAGAAGCTTGTCTCCCTGGAGGACCGGGTGGGTAACTGTCCAGAAA-CATGTGCACATGAGGTGTGGAGAGGAGGCTTTCCTGCCCGGCTTGGGATCTGCAGG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171774953 285 + 173848474 CATTGCCTCAGGACCCTTGAGGGATGCGCGGCCCCTGAGCCCCTGACACACAGGGTGAGCTGGTGGGAAGCGAAGCCCGCAGGCGAGTCCTCCCCTGTCATTTCCAGGCAGGGCCTACTCCGTTGGTCATTCCCACTGGTGGCTCAGGTGTAATACGCACTTCCAAAGAATCTCAGCCCATAGAAGAAGCTTGTCTCCCTGGAGGACCGGGTGGGTAACTGTCCAGAAA-CATGTGCACATGAGGTGTGGAGAGGAGGCTTTCCTGCCCGGCTTGGGATCTGCAGG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11456822 285 - 12463322 CATTGCCTCAGGACCCTTGAGGGATGCGCGGCCCCTGAGCCCCTGACACACAGGGTGAGCTGGTGGGAAGCGAAGCCCGCAGGCGAGTCCTCCCCTGTCATTTCCAGGCAGGGCCTGCTCCGTTGTTCATTCCCACTGGCGGCTCAGGTGTAATACGCACTTCCAAAGAATCTCAGCCCGTAGAAGAAGCTTGTCTCCCTGGAGGACCGGGTGGGTAACTGTCCAGAAA-TGTGTGCACATGAGGTGAGGAGAGGAGGCTTTCCTGCCCGGCTTGGGATCTGCAGG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156284150 283 + 157873769 CATTGCCTCAGGACCCCTGAGGGATGC-CCGTCCCTGAGCCCCTGGCACACAAGGTGAGCT-GTGGGAAGCGAAGCCTGCAGGCGAGGCCTCCCCTATCATTTCCAGGCAGGGCCTGCTCCGTTGGTCATTCCCACAGGCGGCTCAGGTATAATACGCACTTCCAAAGAATCTCAGCCCATAGAAGAAGCTTGTCTCCCTGGAGGACCGGGTGGGTGACTCTCCAGAAA-CATGTGCACATGAGGTGTGGAGAGGAGGCTTTCCTGCCCGGCCTGGGATCTGCAGG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170310327 286 + 172585720 CATTGCCTCAGGACCCCTGAGGGATGCCTGGCTCCTGAGCCCCTGACACACCAGGTGAGCTGGTGGGAAGCAAAGCCTGCAGGCAAGGCCTCCCCGGTCATTTCCAGGCAGGGCCTGCTCCGTTGGTCATCCCCATGGGCGGCTCAGGTGTAATACACACTTCCGAAGAATCTCAGCCCATAGAAGAAGCTTGTCTCCCTGGAGGACCAGGTGGGTGACTGTCCAAAAAGCAAGTGCACATGAGGCGTGGAGAGGAGGCTTTCCTGCCTGGCCTGGGATCTGCAGG i rheMac8.chr4 C 0 I 1 s macFas5.chr4 169056165 286 - 170955103 CATTGCCTCAGGACCCCTGAGGGATGCCTGGCTCCTGAGCCCCTGACACACCAGGTGAGCTGGTGGGAAGCGAAGCCTGCAGGCAAGGCCTCCCCGGTCATTTCCAGGCAGGGCCTGCTCCGTTGGTCATCCCCATGGGCGGCTCAGGTGTAATACACACTTCCGAAGAATCTCAGCCCATAGAAGAAGCTTGTCTCCCTGGAGGACCAGGTGGGTGACTGTCCAAAAAGCAAGTGCACATGAGGCGTGGAGAGGAGGCTTTCCTGCCTGGCCTGGGATCTGCAGG i macFas5.chr4 C 0 I 1 s macNem1.NW_012011000v1 8342862 286 + 10161646 CATTGCCTCAGGACCCCTGAGGGATGCCTGGCTCCTGAGCCCCTGACACACCAGGTGAGCTGGTGGGAAGCGAAGCCTGCAGGCAAGGCCTCCCCGGTCATTTCCAGGCAGGGCCTGCTCCGTTGGTCATCCCCATGGGCGGCTCAGGTGTAATACACACTTCCGAAGAATCTCAGCCCATAGAAGAAGCTTGTCTCCCTGGAGGACCAGGTGGGTGACTGTCCAAAAAGCAAGTGCACATGAGGCGTGGAGAGGAGGCTTTCCTGCCTGGCCTGAGATCTGCAGG i macNem1.NW_012011000v1 C 0 I 1 s cerAty1.NW_012002071v1 1373411 286 + 3144229 CATTGCCTCAGGACCCCTGAGGGATGCCTGGCTCCTGAGCCCCTGACACACCAGGTGAGTTGGTGGGAAGCGAAGCCTGCAGGCAAGGCCTCCTCGGTCATTTCCAGGCAGGGCCTGCTCCGTTGGTCATCCCCATGGGCGGCTCAGGTGTAATACACACTTCCGAAGAATCTCAGCCCATAGAAGAAGCTTGTCTCCCTGGAGGACCGGGTGGGTGACTGTCCAGAAAGCAAGTGCACATGAGGCATGGAGAGGAGGCTTTCCTGCCTGGCCTGGGATCTGCAGG i cerAty1.NW_012002071v1 C 0 I 1 s chlSab2.chr13 96651910 286 + 98384682 CATTGCCTCAGGACCCCTGAGGGATGCCTGGCTCCTGAGCCCCTGACACACCAGGTGAGCTGGTGGGAAGCGAAGCCTGCAGGCAAGGCCTCCCCCGTCATTTCCAGGCAGGGCCTGCTCCGTTGGTCATCCCCATGGGCGGCTCAGGTGTAACACACACTTCCGAAGAATCTCAGCCCATAGAAGAACCTTGTCTCCCTGGAGGACCGGGTGGATGACTGTCCAGAAAGTAAGTGCACATGAGGCGTGGAGAGGAGGCTTTCCTGCCTGGTCTGGGATCTGCAGG i chlSab2.chr13 C 0 I 1 s manLeu1.NW_012106474v1 8196630 286 - 10857215 CATTGCCTCAGGCCCCCTGAGGGATGCCTGGCTCCTGAGCCCCTGACACACCAGGTGAGCTGGTGGGAAGCGAAGCCTGCAGGCAAGGCCTCCCCGGTCATTTCCAGGCAGGGCCTGCTCCGTTGGTCATCCCCATGGGCGGCTCAGGTGTAATACACACTTCCGAAGAATCTCAGCCCATAGAAGAAGCTTGTCTCCCTGGAGGACTGGGCGGGTGACTGTCCAGAAAGTAAGTGCACATGAGGCATGGAGAGGAGGCTTTCCTGCCTGGCCTGGGATCTGCAGG i manLeu1.NW_012106474v1 C 0 I 1 s colAng1.NW_012114488v1 15590987 286 - 23502949 CATTGCCTCAGGACCCCTGAGGGATGCCTGGCCCCTGAGCCCCTGACACACCAGGTGAGCTGGTGGGAAGCGAAGCCTGCAGGCAAGGCCTTCCTGGTCATTTCCAGGCAGGGCCTGCTCCGTTGGTCATCCCCATGGGCGGCTCAGGTGTAATACACACTTCCGAAGAATCTCAGCTCACAGAAGAAGCTTGTCTCCCTGGAGGACCAGGTGGGTGACTGTCCAGAAAGCAAGTGCACATGAGGCGTGGAGAGAAGGCTTTCCTGCCTGGCCTGGGATCTGCAGG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169860409 264 + 171630274 CATTGCCTTAGGA------------------CCCGTGAGCCCC-GACACACAAGGTGAGTTTGCAGGAAGCCAGGCCTGCAGGTGAGGCCTTT---GTCATTTCCAGGCGGGGCCTACTCCCTTGGTCATTTCCACGGGCGGCCCAGGTGTAATACTCATTTCCAAAGGATCTCAGTCCATGGAAGAAGCCTGCCTCCCTGGGGGACTGGGTGGGTGACTGCCCAGAAAGCATGTGCACATGAGGTGTAGAGAGAAGGCTTTCCTGCCCAGCCTGAGAGCTGCAGG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1273484 280 - 2905041 CATTGCCTCAGGACCCCTGAGGGGTGCCCAGCCCCTGAGCCCC-GACACACAAGGTGAGTTTGCAGGAAGCTAGGCCTGCAGGCGAGG-CGCC---GTCATTTCCAGGCGGGGCCTGCTCCGTCGGTCATTCCCAGGGGCGGGCCAGGTGTAATACTCACTTCCAAAGCATCTCAG-CCATGGAAGAAGCTCGCCTCCCTGGAGGACTGGGTGGGTGACTGCCCAGAGAGCACGTGCACATGAGGTGTAGAGAAGAGGCTTTCCTGCCCAGCCTGAGATCTGCAGG i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1230554 281 - 2164891 CACTGCCTCAGGACCCCTGAGGGATGCCCAGCCCCTGAG-CCC-GACACACAAGGTGAGTTTGCAGGAAGCTAGGCCTGCAGGCGAGGCCTCT---GTCATTTCCAGGTGGGGCCTACTCCATTCGTCATTGCCATGGCTGGCCCAGGTGTAATACTCACTTCCAAAGAATCTCAGCCCATGGAAGAAGCCTGCCTCCCTGGAGGACTGGGTGGGTGACTGCCCAGAAAGCATGTGCACATGAGGTGTAGAGAAGAGGCTTTCCTGCCCAGCCTGAGATCTGCAGG i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1484396 281 - 1813869 CATCGCCTCAGGA-CCGTGAGGGATGCCCAGCCCCTGAGCCCC-GACACACAAGTTGGGTTTGCAGGACGCGAGGTCTGCAGGTGAGGCCTCC---GTCATTTCCAGGCGGGGCCTACTCCGTCAGTCATTCCCACGGGCAGCCCAGGTGTAATACTCACTTCCAAAGAATCTCAGCCCATGGAAGAAGCCTGCCTCCCTGGAGGACTGGGTGGGTGACTGCCCAGAAAGCATGTGCACATGAGGTGTAGAGAAGAGGCTTTCCTGCCCAGTCTGAGATCTGCAGG i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10934224 794 - 12073884 I e dasNov3.JH569188 539847 461 + 760995 I e canFam3.chr1 56157105 382 + 122678785 I a score=-7654.000000 s hg38.chr6_KB021644v2_alt 84034 1 + 185823 -G s panTro5.chr6 173536516 1 + 175400573 -G i panTro5.chr6 C 0 C 0 s panPan2.chr6 171775238 1 + 173848474 -G i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11457107 1 - 12463322 -G i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156284433 1 + 157873769 -G i nomLeu3.chr3 C 0 C 0 s calJac3.chr4 169860673 1 + 171630274 T- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1273764 1 - 2905041 T- i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1230835 1 - 2164891 T- i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1484677 1 - 1813869 T- i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10934224 794 - 12073884 I e dasNov3.JH569188 539847 461 + 760995 I e colAng1.NW_012114488v1 15591273 0 - 23502949 C e canFam3.chr1 56157105 382 + 122678785 I e chlSab2.chr13 96652196 1 + 98384682 I e cerAty1.NW_012002071v1 1373697 1 + 3144229 I e manLeu1.NW_012106474v1 8196916 1 - 10857215 I e macNem1.NW_012011000v1 8343148 1 + 10161646 I e rheMac8.chr4 170310613 1 + 172585720 I e macFas5.chr4 169056451 1 - 170955103 I a score=272277.000000 s hg38.chr6_KB021644v2_alt 84035 40 + 185823 GTGGGCAGAGGTGGCACAGGCCTTGTGGGCAGAGGTGGCA s panTro5.chr6 173536517 40 + 175400573 GTGGGCAGAGGTGGCACGGGCCTTGTGGGCAGAGGTGGCA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171775239 40 + 173848474 GTGGGCAGAGGTGGCACGGGCCTTGTGGGCAGAGGTGGCA i panPan2.chr6 C 0 C 0 s nomLeu3.chr3 156284434 40 + 157873769 GTGGGCAGAGGTGGCATGAGCCTTGTGGGCAGAGGTGGCA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170310614 40 + 172585720 GTGGGCAGAGGTGGCACGGGTCTTGTGGGCAAAGGTGGCT i rheMac8.chr4 I 1 C 0 s macFas5.chr4 169056452 40 - 170955103 GTGGGCAGAGGTGGCACGGGCCTTGTGGGCAAAGGTGGCT i macFas5.chr4 I 1 C 0 s macNem1.NW_012011000v1 8343149 40 + 10161646 GTGGGCAGAGGTGGCACGGGCCTTGTGGGCAAAGGTGGCT i macNem1.NW_012011000v1 I 1 C 0 s cerAty1.NW_012002071v1 1373698 40 + 3144229 GTGGGCAGAGGTGGCACGGGCCTCGTGGGCAGAGGTGGCA i cerAty1.NW_012002071v1 I 1 C 0 s chlSab2.chr13 96652197 40 + 98384682 GTGGGCAGAGGTGGCATGGGCCTTGTGGGCAGAGGTGGCA i chlSab2.chr13 I 1 C 0 s manLeu1.NW_012106474v1 8196917 40 - 10857215 GTGGGCAGAGGTGGCACGGGCCTTGTGGGCAGAGGTGGCA i manLeu1.NW_012106474v1 I 1 C 0 s calJac3.chr4 169860674 30 + 171630274 GTGGGCAGAGGAGGCATAGGCCTTGTGGGC---------- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1273765 40 - 2905041 GTGGGCGCAGGAGGCACGGGCCTTGTGGGCAGAGGAGGCA i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1230836 39 - 2164891 GTGGGCAGAGGAGGGA-GGGCCTTGTGTGCAGAGGGGTTA i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1484678 40 - 1813869 GTGAGCAGAGGTGGCACAGGCCTTGTGGGCAGAGGAGGCA i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10934224 794 - 12073884 I e dasNov3.JH569188 539847 461 + 760995 I e colAng1.NW_012114488v1 15591273 0 - 23502949 C e canFam3.chr1 56157105 382 + 122678785 I e gorGor5.CYUI01015032v1 11457108 0 - 12463322 C a score=19845.000000 s hg38.chr6_KB021644v2_alt 84075 4 + 185823 CGGG s panTro5.chr6 173536557 4 + 175400573 CGGG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171775279 4 + 173848474 CGGG i panPan2.chr6 C 0 C 0 s nomLeu3.chr3 156284474 4 + 157873769 CGGG i nomLeu3.chr3 C 0 T 24 s rheMac8.chr4 170310654 4 + 172585720 CGGG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169056492 4 - 170955103 CGGG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8343189 4 + 10161646 CGGG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1373738 4 + 3144229 CAGG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96652237 4 + 98384682 CGGG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8196957 4 - 10857215 TGAG i manLeu1.NW_012106474v1 C 0 C 0 s saiBol1.JH378287 1273805 4 - 2905041 CGGG i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1230875 4 - 2164891 CTGG i cebCap1.NW_016107695v1 C 0 C 0 e otoGar3.GL873575 10934224 794 - 12073884 I e aotNan1.NW_018494782v1 1484718 0 - 1813869 C e calJac3.chr4 169860704 0 + 171630274 C e dasNov3.JH569188 539847 461 + 760995 I e colAng1.NW_012114488v1 15591273 0 - 23502949 C e canFam3.chr1 56157105 382 + 122678785 I e gorGor5.CYUI01015032v1 11457108 0 - 12463322 C a score=19921.000000 s hg38.chr6_KB021644v2_alt 84079 4 + 185823 CCTT s panTro5.chr6 173536561 4 + 175400573 CCTT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171775283 4 + 173848474 CCTT i panPan2.chr6 C 0 C 0 s nomLeu3.chr3 156284454 4 + 157873769 CCTT i nomLeu3.chr3 T 24 C 0 s rheMac8.chr4 170310658 4 + 172585720 CCTC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169056496 4 - 170955103 CCTC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8343193 4 + 10161646 CCTC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1373742 4 + 3144229 CCTT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96652241 4 + 98384682 CCTT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8196961 4 - 10857215 TCTC i manLeu1.NW_012106474v1 C 0 C 0 s saiBol1.JH378287 1273809 4 - 2905041 CCTT i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1230879 4 - 2164891 CCTT i cebCap1.NW_016107695v1 C 0 C 0 e otoGar3.GL873575 10934224 794 - 12073884 I e aotNan1.NW_018494782v1 1484718 0 - 1813869 C e calJac3.chr4 169860704 0 + 171630274 C e dasNov3.JH569188 539847 461 + 760995 I e colAng1.NW_012114488v1 15591273 0 - 23502949 C e canFam3.chr1 56157105 382 + 122678785 I e gorGor5.CYUI01015032v1 11457108 0 - 12463322 C a score=115300.000000 s hg38.chr6_KB021644v2_alt 84083 16 + 185823 GTGGGCAGAGGTGGCA s panTro5.chr6 173536565 16 + 175400573 GTGGGCAGAGGTGGCA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171775287 16 + 173848474 GTGGGCAGAGGTGGCA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11457108 16 - 12463322 GTGGGCTGAGGTGGCA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156284458 16 + 157873769 GTGGGCAGAGGTGGCA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170310662 16 + 172585720 GTGGGCAGAGGTGGCA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169056500 16 - 170955103 GTGGGCAGAGGTGGCA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8343197 16 + 10161646 GTGGGTAGAGGTGGCA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1373746 16 + 3144229 GTGGGCAGAGGTGGCA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96652245 16 + 98384682 GTGGGCAGAGGTGGCA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8196965 16 - 10857215 ATTGGCAGAGGTGGCA i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169860704 10 + 171630274 ------AGAGGTGGCA i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1273813 16 - 2905041 GGGGGAAGAGGTGGCA i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1230883 16 - 2164891 GTGGGCAGAGGAGGCA i cebCap1.NW_016107695v1 C 0 T 47 e otoGar3.GL873575 10934224 794 - 12073884 I e aotNan1.NW_018494782v1 1484718 0 - 1813869 C e dasNov3.JH569188 539847 461 + 760995 I e colAng1.NW_012114488v1 15591273 0 - 23502949 C e canFam3.chr1 56157105 382 + 122678785 I a score=2760.000000 s hg38.chr6_KB021644v2_alt 84099 1 + 185823 T s panTro5.chr6 173536581 1 + 175400573 T i panTro5.chr6 C 0 C 0 s panPan2.chr6 171775303 1 + 173848474 T i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11457124 1 - 12463322 T i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156284474 1 + 157873769 C i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170310678 1 + 172585720 T i rheMac8.chr4 C 0 T 24 s macFas5.chr4 169056516 1 - 170955103 T i macFas5.chr4 C 0 T 24 s macNem1.NW_012011000v1 8343213 1 + 10161646 T i macNem1.NW_012011000v1 C 0 T 24 s cerAty1.NW_012002071v1 1373762 1 + 3144229 T i cerAty1.NW_012002071v1 C 0 T 24 s chlSab2.chr13 96652261 1 + 98384682 T i chlSab2.chr13 C 0 T 66 s manLeu1.NW_012106474v1 8196981 1 - 10857215 C i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169860714 1 + 171630274 C i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1273829 1 - 2905041 C i saiBol1.JH378287 C 0 C 0 e otoGar3.GL873575 10934224 794 - 12073884 I e aotNan1.NW_018494782v1 1484718 0 - 1813869 C e cebCap1.NW_016107695v1 1230899 47 - 2164891 T e dasNov3.JH569188 539847 461 + 760995 I e colAng1.NW_012114488v1 15591273 0 - 23502949 C e canFam3.chr1 56157105 382 + 122678785 I a score=11497.000000 s hg38.chr6_KB021644v2_alt 84100 3 + 185823 GGA s panTro5.chr6 173536582 3 + 175400573 GGA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171775304 3 + 173848474 GGA i panPan2.chr6 C 0 T 48 s gorGor5.CYUI01015032v1 11457125 3 - 12463322 GGG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156284475 3 + 157873769 GGG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170310655 3 + 172585720 GGG i rheMac8.chr4 T 24 C 0 s macFas5.chr4 169056493 3 - 170955103 GGG i macFas5.chr4 T 24 C 0 s macNem1.NW_012011000v1 8343190 3 + 10161646 GGG i macNem1.NW_012011000v1 T 24 C 0 s cerAty1.NW_012002071v1 1373739 3 + 3144229 AGG i cerAty1.NW_012002071v1 T 24 C 0 s manLeu1.NW_012106474v1 8196982 3 - 10857215 AGG i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169860715 3 + 171630274 TGG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1273830 3 - 2905041 GGG i saiBol1.JH378287 C 0 C 0 e otoGar3.GL873575 10934224 794 - 12073884 I e aotNan1.NW_018494782v1 1484718 0 - 1813869 C e cebCap1.NW_016107695v1 1230899 47 - 2164891 T e dasNov3.JH569188 539847 461 + 760995 I e colAng1.NW_012114488v1 15591273 0 - 23502949 C e canFam3.chr1 56157105 382 + 122678785 I e chlSab2.chr13 96652262 66 + 98384682 T a score=11759.000000 s hg38.chr6_KB021644v2_alt 84103 2 + 185823 CC s panTro5.chr6 173536585 2 + 175400573 CC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171775259 2 + 173848474 CC i panPan2.chr6 T 48 C 0 s gorGor5.CYUI01015032v1 11457128 2 - 12463322 CC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156284478 2 + 157873769 CC i nomLeu3.chr3 C 0 T 46 s rheMac8.chr4 170310658 2 + 172585720 CC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169056496 2 - 170955103 CC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8343193 2 + 10161646 CC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1373742 2 + 3144229 CC i cerAty1.NW_012002071v1 C 0 C 0 s manLeu1.NW_012106474v1 8196985 2 - 10857215 CC i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169860718 2 + 171630274 TC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1273833 2 - 2905041 CC i saiBol1.JH378287 C 0 C 0 e otoGar3.GL873575 10934224 794 - 12073884 I e aotNan1.NW_018494782v1 1484718 0 - 1813869 C e cebCap1.NW_016107695v1 1230899 47 - 2164891 T e dasNov3.JH569188 539847 461 + 760995 I e colAng1.NW_012114488v1 15591273 0 - 23502949 C e canFam3.chr1 56157105 382 + 122678785 I e chlSab2.chr13 96652262 66 + 98384682 T a score=5005.000000 s hg38.chr6_KB021644v2_alt 84105 1 + 185823 T s panTro5.chr6 173536587 1 + 175400573 T i panTro5.chr6 C 0 C 0 s panPan2.chr6 171775261 1 + 173848474 T i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11457130 1 - 12463322 T i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170310660 1 + 172585720 T i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169056498 1 - 170955103 T i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8343195 1 + 10161646 T i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1373744 1 + 3144229 T i cerAty1.NW_012002071v1 C 0 C 0 s manLeu1.NW_012106474v1 8196987 1 - 10857215 T i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169860720 1 + 171630274 T i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1273835 1 - 2905041 T i saiBol1.JH378287 C 0 C 0 e otoGar3.GL873575 10934224 794 - 12073884 I e aotNan1.NW_018494782v1 1484718 0 - 1813869 C e cebCap1.NW_016107695v1 1230899 47 - 2164891 T e dasNov3.JH569188 539847 461 + 760995 I e colAng1.NW_012114488v1 15591273 0 - 23502949 C e canFam3.chr1 56157105 382 + 122678785 I e chlSab2.chr13 96652262 66 + 98384682 T e nomLeu3.chr3 156284480 46 + 157873769 T a score=43495.000000 s hg38.chr6_KB021644v2_alt 84106 8 + 185823 TGTGGGAA s panTro5.chr6 173536588 8 + 175400573 TGTGGGCA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171775262 8 + 173848474 TGTGGGCA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11457131 8 - 12463322 TGTGGGCA i gorGor5.CYUI01015032v1 C 0 T 31 s rheMac8.chr4 170310661 8 + 172585720 CGTGGGCA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169056499 8 - 170955103 CGTGGGCA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8343196 8 + 10161646 CGTGGGTA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1373745 8 + 3144229 TGTGGGCA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96652196 8 + 98384682 TGTGGGCA i chlSab2.chr13 T 66 C 0 s manLeu1.NW_012106474v1 8196988 8 - 10857215 CGTGGGCA i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169860721 8 + 171630274 TGTGGGCA i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1273836 8 - 2905041 TGTGGGCA i saiBol1.JH378287 C 0 C 0 e otoGar3.GL873575 10934224 794 - 12073884 I e aotNan1.NW_018494782v1 1484718 0 - 1813869 C e cebCap1.NW_016107695v1 1230899 47 - 2164891 T e dasNov3.JH569188 539847 461 + 760995 I e colAng1.NW_012114488v1 15591273 0 - 23502949 C e canFam3.chr1 56157105 382 + 122678785 I e nomLeu3.chr3 156284480 46 + 157873769 T a score=43309.000000 s hg38.chr6_KB021644v2_alt 84114 10 + 185823 GAGGTGGCAT s panTro5.chr6 173536596 10 + 175400573 GAGGTGGCAC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171775270 10 + 173848474 GAGGTGGCAC i panPan2.chr6 C 0 C 0 s rheMac8.chr4 170310669 10 + 172585720 GAGGTGGCAT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169056507 10 - 170955103 GAGGTGGCAT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8343204 10 + 10161646 GAGGTGGCAT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1373753 10 + 3144229 GAGGTGGCAT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96652204 10 + 98384682 GAGGTGGCAT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8196996 10 - 10857215 GAGGTGGCAT i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169860729 10 + 171630274 GAAGTGGTCT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1273844 10 - 2905041 GAGGAGGCAC i saiBol1.JH378287 C 0 C 0 e otoGar3.GL873575 10934224 794 - 12073884 I e aotNan1.NW_018494782v1 1484718 0 - 1813869 C e cebCap1.NW_016107695v1 1230899 47 - 2164891 T e dasNov3.JH569188 539847 461 + 760995 I e colAng1.NW_012114488v1 15591273 0 - 23502949 C e canFam3.chr1 56157105 382 + 122678785 I e nomLeu3.chr3 156284480 46 + 157873769 T e gorGor5.CYUI01015032v1 11457139 31 - 12463322 T a score=14322.000000 s hg38.chr6_KB021644v2_alt 84124 3 + 185823 GGG s panTro5.chr6 173536606 3 + 175400573 GGG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171775280 3 + 173848474 GGG i panPan2.chr6 C 0 C 0 s rheMac8.chr4 170310679 3 + 172585720 AGG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169056517 3 - 170955103 AGG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8343214 3 + 10161646 AGG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1373763 3 + 3144229 GGG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96652214 3 + 98384682 GGG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8197006 3 - 10857215 GGG i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169860739 2 + 171630274 -GG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1273854 2 - 2905041 -GG i saiBol1.JH378287 C 0 I 434 s aotNan1.NW_018494782v1 1484718 3 - 1813869 GGG i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10934224 794 - 12073884 I e cebCap1.NW_016107695v1 1230899 47 - 2164891 T e dasNov3.JH569188 539847 461 + 760995 I e colAng1.NW_012114488v1 15591273 0 - 23502949 C e canFam3.chr1 56157105 382 + 122678785 I e nomLeu3.chr3 156284480 46 + 157873769 T e gorGor5.CYUI01015032v1 11457139 31 - 12463322 T a score=21340.000000 s hg38.chr6_KB021644v2_alt 84127 4 + 185823 CCTT s panTro5.chr6 173536609 4 + 175400573 CCTT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171775283 4 + 173848474 CCTT i panPan2.chr6 C 0 C 0 s rheMac8.chr4 170310682 4 + 172585720 CCTT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169056520 4 - 170955103 CCTT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8343217 4 + 10161646 CCTT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1373766 4 + 3144229 CCTC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96652217 4 + 98384682 CCTT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8197009 4 - 10857215 CCTC i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169860741 4 + 171630274 TCTT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1274290 4 - 2905041 CCTT i saiBol1.JH378287 I 434 C 0 s aotNan1.NW_018494782v1 1484721 4 - 1813869 CCTT i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10934224 794 - 12073884 I e cebCap1.NW_016107695v1 1230899 47 - 2164891 T e dasNov3.JH569188 539847 461 + 760995 I e colAng1.NW_012114488v1 15591273 0 - 23502949 C e canFam3.chr1 56157105 382 + 122678785 I e nomLeu3.chr3 156284480 46 + 157873769 T e gorGor5.CYUI01015032v1 11457139 31 - 12463322 T a score=35397.000000 s hg38.chr6_KB021644v2_alt 84131 6 + 185823 GTGGGC s panTro5.chr6 173536613 6 + 175400573 GTGGGC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171775287 6 + 173848474 GTGGGC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11457108 6 - 12463322 GTGGGC i gorGor5.CYUI01015032v1 T 31 C 0 s nomLeu3.chr3 156284434 6 + 157873769 GTGGGC i nomLeu3.chr3 T 46 C 0 s rheMac8.chr4 170310686 6 + 172585720 GTGAGT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169056524 6 - 170955103 GTGAGT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8343221 6 + 10161646 GTGAGT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1373770 6 + 3144229 GTGGGC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96652221 6 + 98384682 GTGGGC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8197013 6 - 10857215 ATTGGC i manLeu1.NW_012106474v1 C 0 T 96 s calJac3.chr4 169860745 6 + 171630274 GTGGGC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1274294 6 - 2905041 GTGGGC i saiBol1.JH378287 C 0 C 0 s aotNan1.NW_018494782v1 1484725 6 - 1813869 CTGGGA i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10934224 794 - 12073884 I e cebCap1.NW_016107695v1 1230899 47 - 2164891 T e dasNov3.JH569188 539847 461 + 760995 I e colAng1.NW_012114488v1 15591273 0 - 23502949 C e canFam3.chr1 56157105 382 + 122678785 I a score=86694.000000 s hg38.chr6_KB021644v2_alt 84137 11 + 185823 AGAGGTGGCAT s panTro5.chr6 173536619 11 + 175400573 AGAGGTGGCAT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171775293 11 + 173848474 AGAGGTGGCAT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11457114 11 - 12463322 TGAGGTGGCAT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156284440 11 + 157873769 AGAGGTGGCAT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170310692 11 + 172585720 AGAGGTGGCAT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169056530 11 - 170955103 AGAGGTGGCAT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8343227 11 + 10161646 AGAGGTGGCAT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1373776 11 + 3144229 AGAGGTGACAT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96652227 11 + 98384682 AGAGGTGGCAC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8196923 11 - 10857215 AGAGGTGGCAC i manLeu1.NW_012106474v1 T 96 C 0 s calJac3.chr4 169860751 11 + 171630274 AGAGGTGGCAT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1274300 11 - 2905041 AGAGGTGGCAC i saiBol1.JH378287 C 0 C 0 s aotNan1.NW_018494782v1 1484731 11 - 1813869 AGAGGTGGCAC i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10934224 794 - 12073884 I e cebCap1.NW_016107695v1 1230899 47 - 2164891 T e dasNov3.JH569188 539847 461 + 760995 I e colAng1.NW_012114488v1 15591273 0 - 23502949 C e canFam3.chr1 56157105 382 + 122678785 I a score=39756.000000 s hg38.chr6_KB021644v2_alt 84148 5 + 185823 GGGCC s panTro5.chr6 173536630 5 + 175400573 GGGCC i panTro5.chr6 C 0 T 118 s panPan2.chr6 171775304 5 + 173848474 GGACC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11457125 5 - 12463322 GGGCC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156284451 5 + 157873769 GAGCC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170310703 5 + 172585720 GGGCC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169056541 5 - 170955103 GGGCC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8343238 5 + 10161646 GGGCC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1373787 5 + 3144229 GAGCC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96652238 5 + 98384682 GGGCC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8196934 5 - 10857215 GGGCC i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169860762 5 + 171630274 AGGCC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1274311 5 - 2905041 ATGCC i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1230852 5 - 2164891 GGGCC i cebCap1.NW_016107695v1 T 47 C 0 s aotNan1.NW_018494782v1 1484742 5 - 1813869 AGGCC i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10934224 794 - 12073884 I e dasNov3.JH569188 539847 461 + 760995 I e colAng1.NW_012114488v1 15591273 0 - 23502949 C e canFam3.chr1 56157105 382 + 122678785 I a score=11736.000000 s hg38.chr6_KB021644v2_alt 84153 2 + 185823 TT s panPan2.chr6 171775309 2 + 173848474 TT i panPan2.chr6 C 0 T 72 s gorGor5.CYUI01015032v1 11457130 2 - 12463322 TT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156284456 2 + 157873769 TT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170310708 2 + 172585720 TC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169056546 2 - 170955103 TC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8343243 2 + 10161646 TC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1373792 2 + 3144229 TC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96652243 2 + 98384682 TT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8196939 2 - 10857215 TT i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169860767 2 + 171630274 TT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1274316 2 - 2905041 TT i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1230857 2 - 2164891 TT i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1484747 2 - 1813869 TT i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10934224 794 - 12073884 I e dasNov3.JH569188 539847 461 + 760995 I e colAng1.NW_012114488v1 15591273 0 - 23502949 C e canFam3.chr1 56157105 382 + 122678785 I e panTro5.chr6 173536635 118 + 175400573 T a score=187082.000000 s hg38.chr6_KB021644v2_alt 84155 22 + 185823 GTGGGCAGAGGTGGCACGGGCC s panTro5.chr6 173536517 22 + 175400573 GTGGGCAGAGGTGGCACGGGCC i panTro5.chr6 T 118 C 0 s panPan2.chr6 171775239 22 + 173848474 GTGGGCAGAGGTGGCACGGGCC i panPan2.chr6 T 72 C 0 s gorGor5.CYUI01015032v1 11457132 22 - 12463322 GTGGGCAGAGGTGGCACGGGCC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156284458 22 + 157873769 GTGGGCAGAGGTGGCACGGGCC i nomLeu3.chr3 C 0 T 24 s rheMac8.chr4 170310710 22 + 172585720 GTGGGCAGAGGTGGCACGGGCC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169056548 22 - 170955103 GTGGGCAGAGGTGGCACGGGCC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8343245 22 + 10161646 GTGGGCAGAGGTGGCACGGGCC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1373794 22 + 3144229 ATTGGCAGAGGTGGCACAGGCC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96652245 22 + 98384682 GTGGGCAGAGGTGGCATGGGCC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8196941 22 - 10857215 GTGGGCAGAGGTGGCATGAGTC i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169860769 22 + 171630274 GGGGGCAGAGGTGGCACTGGTC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1274318 22 - 2905041 GTGGGCAGAGGAGGCACGGGCC i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1230859 22 - 2164891 GTGTGCAGAGGGGTTACTGGCC i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1484749 22 - 1813869 GTGGGCAGAGGAGGCACGGGCC i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10934224 794 - 12073884 I e dasNov3.JH569188 539847 461 + 760995 I e colAng1.NW_012114488v1 15591273 0 - 23502949 C e canFam3.chr1 56157105 382 + 122678785 I a score=9555.000000 s hg38.chr6_KB021644v2_alt 84177 1 + 185823 T s panTro5.chr6 173536539 1 + 175400573 T i panTro5.chr6 C 0 C 0 s panPan2.chr6 171775261 1 + 173848474 T i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11457154 1 - 12463322 T i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156284456 1 + 157873769 T i nomLeu3.chr3 T 24 C 0 s rheMac8.chr4 170310732 1 + 172585720 T i rheMac8.chr4 C 0 T 96 s macFas5.chr4 169056570 1 - 170955103 T i macFas5.chr4 C 0 T 96 s macNem1.NW_012011000v1 8343267 1 + 10161646 T i macNem1.NW_012011000v1 C 0 T 96 s cerAty1.NW_012002071v1 1373816 1 + 3144229 T i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96652267 1 + 98384682 T i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8196963 1 - 10857215 T i manLeu1.NW_012106474v1 C 0 T 48 s calJac3.chr4 169860791 1 + 171630274 T i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1274340 1 - 2905041 T i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1230881 1 - 2164891 T i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1484771 1 - 1813869 T i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10934224 794 - 12073884 I e dasNov3.JH569188 539847 461 + 760995 I e colAng1.NW_012114488v1 15591273 0 - 23502949 C e canFam3.chr1 56157105 382 + 122678785 I a score=142334.000000 s hg38.chr6_KB021644v2_alt 84178 16 + 185823 TGTGGGCAGAGGTGGC s panTro5.chr6 173536540 16 + 175400573 TGTGGGCAGAGGTGGC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171775262 16 + 173848474 TGTGGGCAGAGGTGGC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11457155 16 - 12463322 TGTGGGCAGAGGTGGC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156284457 16 + 157873769 TGTGGGCAGAGGTGGC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170310637 16 + 172585720 TGTGGGCAAAGGTGGC i rheMac8.chr4 T 96 C 0 s macFas5.chr4 169056475 16 - 170955103 TGTGGGCAAAGGTGGC i macFas5.chr4 T 96 C 0 s macNem1.NW_012011000v1 8343172 16 + 10161646 TGTGGGCAAAGGTGGC i macNem1.NW_012011000v1 T 96 C 0 s cerAty1.NW_012002071v1 1373817 16 + 3144229 TGTGGGCAGAGGTGGC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96652268 16 + 98384682 CATAGGCAGAGGTGGC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8196916 16 - 10857215 TGTGGGCAGAGGTGGC i manLeu1.NW_012106474v1 T 48 C 0 s calJac3.chr4 169860792 16 + 171630274 TGTGGGCAGAGGTGGT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1274341 16 - 2905041 TGAGGGAAGAGGTGGC i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1230882 16 - 2164891 TGTGGGCAGAGGAGGC i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1484772 16 - 1813869 TGTGGGCAGAGGTGGC i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10934224 794 - 12073884 I e dasNov3.JH569188 539847 461 + 760995 I e colAng1.NW_012114488v1 15591273 0 - 23502949 C e canFam3.chr1 56157105 382 + 122678785 I a score=1219.000000 s hg38.chr6_KB021644v2_alt 84194 1 + 185823 A s panTro5.chr6 173536556 1 + 175400573 A i panTro5.chr6 C 0 C 0 s panPan2.chr6 171775278 1 + 173848474 A i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11457171 1 - 12463322 A i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156284473 1 + 157873769 A i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170310653 1 + 172585720 T i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169056491 1 - 170955103 T i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8343188 1 + 10161646 T i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1373833 1 + 3144229 A i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96652284 1 + 98384682 A i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8196932 1 - 10857215 A i manLeu1.NW_012106474v1 C 0 C 0 s saiBol1.JH378287 1274357 1 - 2905041 A i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1230898 1 - 2164891 A i cebCap1.NW_016107695v1 C 0 I 23 s aotNan1.NW_018494782v1 1484788 1 - 1813869 A i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10934224 794 - 12073884 I e calJac3.chr4 169860808 0 + 171630274 C e dasNov3.JH569188 539847 461 + 760995 I e colAng1.NW_012114488v1 15591273 0 - 23502949 C e canFam3.chr1 56157105 382 + 122678785 I a score=44315.000000 s hg38.chr6_KB021644v2_alt 84195 6 + 185823 CGGGCC s panTro5.chr6 173536557 6 + 175400573 CGGGCC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171775279 6 + 173848474 CGGGCC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11457172 6 - 12463322 TGGGCC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156284474 6 + 157873769 CGGGCC i nomLeu3.chr3 C 0 T 46 s rheMac8.chr4 170310654 6 + 172585720 CGGGCC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169056492 6 - 170955103 CGGGCC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8343189 6 + 10161646 CGGGCC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1373834 6 + 3144229 TGGGCC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96652285 6 + 98384682 CGGGCC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8196933 6 - 10857215 CGGGCC i manLeu1.NW_012106474v1 C 0 C 0 s saiBol1.JH378287 1274358 6 - 2905041 CAGGAC i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1230922 6 - 2164891 CAGGCC i cebCap1.NW_016107695v1 I 23 C 0 s aotNan1.NW_018494782v1 1484789 6 - 1813869 CAGGCC i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10934224 794 - 12073884 I e calJac3.chr4 169860808 0 + 171630274 C e dasNov3.JH569188 539847 461 + 760995 I e colAng1.NW_012114488v1 15591273 0 - 23502949 C e canFam3.chr1 56157105 382 + 122678785 I a score=7098.000000 s hg38.chr6_KB021644v2_alt 84201 1 + 185823 T s panTro5.chr6 173536563 1 + 175400573 T i panTro5.chr6 C 0 C 0 s panPan2.chr6 171775285 1 + 173848474 T i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11457178 1 - 12463322 T i gorGor5.CYUI01015032v1 C 0 T 64 s rheMac8.chr4 170310660 1 + 172585720 T i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169056498 1 - 170955103 T i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8343195 1 + 10161646 T i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1373840 1 + 3144229 T i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96652291 1 + 98384682 T i chlSab2.chr13 C 0 T 72 s manLeu1.NW_012106474v1 8196939 1 - 10857215 T i manLeu1.NW_012106474v1 C 0 C 0 s saiBol1.JH378287 1274364 1 - 2905041 T i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1230928 1 - 2164891 T i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1484795 1 - 1813869 T i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10934224 794 - 12073884 I e calJac3.chr4 169860808 0 + 171630274 C e dasNov3.JH569188 539847 461 + 760995 I e colAng1.NW_012114488v1 15591273 0 - 23502949 C e canFam3.chr1 56157105 382 + 122678785 I e nomLeu3.chr3 156284480 46 + 157873769 T a score=5833.000000 s hg38.chr6_KB021644v2_alt 84202 2 + 185823 TG s panTro5.chr6 173536564 2 + 175400573 TG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171775286 2 + 173848474 TG i panPan2.chr6 C 0 C 0 s rheMac8.chr4 170310661 2 + 172585720 CG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169056499 2 - 170955103 CG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8343196 2 + 10161646 CG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1373841 2 + 3144229 CA i cerAty1.NW_012002071v1 C 0 C 0 s manLeu1.NW_012106474v1 8196940 2 - 10857215 TG i manLeu1.NW_012106474v1 C 0 C 0 s saiBol1.JH378287 1274365 2 - 2905041 TG i saiBol1.JH378287 C 0 T 48 s cebCap1.NW_016107695v1 1230929 2 - 2164891 TG i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1484796 2 - 1813869 TG i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10934224 794 - 12073884 I e calJac3.chr4 169860808 0 + 171630274 C e dasNov3.JH569188 539847 461 + 760995 I e colAng1.NW_012114488v1 15591273 0 - 23502949 C e canFam3.chr1 56157105 382 + 122678785 I e chlSab2.chr13 96652292 72 + 98384682 T e nomLeu3.chr3 156284480 46 + 157873769 T e gorGor5.CYUI01015032v1 11457179 64 - 12463322 T a score=92780.000000 s hg38.chr6_KB021644v2_alt 84204 23 + 185823 TGGGAAGAGGTGGCATGGACCTT s panTro5.chr6 173536566 23 + 175400573 TGGGCAGAGGTGGCATGGACCTT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171775288 23 + 173848474 TGGGCAGAGGTGGCATGGACCTT i panPan2.chr6 C 0 C 0 s rheMac8.chr4 170310663 23 + 172585720 TGGGCAGAGGTGGCATAGGCCTT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169056501 23 - 170955103 TGGGCAGAGGTGGCATAGGCCTT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8343198 23 + 10161646 TGGGTAGAGGTGGCATAGGCCTT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1373843 23 + 3144229 TGGGCAGAGGTGGCGTGGGCCTC i cerAty1.NW_012002071v1 C 0 C 0 s manLeu1.NW_012106474v1 8196942 23 - 10857215 TGGGCAGAGGTGGCATGAGTCTC i manLeu1.NW_012106474v1 C 0 C 0 s saiBol1.JH378287 1274319 23 - 2905041 TGGGCAGAGGAGGCACGGGCCTT i saiBol1.JH378287 T 48 C 0 s cebCap1.NW_016107695v1 1230931 23 - 2164891 TGGGCAGAGGAGGCACTGGCCTT i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1484798 22 - 1813869 TGGGCAGAGGAGGCA-GGGCCTT i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10934224 794 - 12073884 I e calJac3.chr4 169860808 0 + 171630274 C e dasNov3.JH569188 539847 461 + 760995 I e colAng1.NW_012114488v1 15591273 0 - 23502949 C e canFam3.chr1 56157105 382 + 122678785 I e chlSab2.chr13 96652292 72 + 98384682 T e nomLeu3.chr3 156284480 46 + 157873769 T e gorGor5.CYUI01015032v1 11457179 64 - 12463322 T a score=84238.000000 s hg38.chr6_KB021644v2_alt 84227 17 + 185823 GTGGGAAGAGGTGGCAC s panTro5.chr6 173536589 17 + 175400573 GTGGGCAGAGGTGGCAC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171775311 17 + 173848474 GTGGGCAGAGGTGGCAC i panPan2.chr6 C 0 C 0 s nomLeu3.chr3 156284434 17 + 157873769 GTGGGCAGAGGTGGCAT i nomLeu3.chr3 T 46 C 0 s rheMac8.chr4 170310686 17 + 172585720 GTGAGTAGAGGTGGCAT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169056524 17 - 170955103 GTGAGTAGAGGTGGCAT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8343221 17 + 10161646 GTGAGTAGAGGTGGCAT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1373866 17 + 3144229 GTGGGCAGAGGTGGCAT i cerAty1.NW_012002071v1 C 0 C 0 s manLeu1.NW_012106474v1 8196965 17 - 10857215 ATTGGCAGAGGTGGCAC i manLeu1.NW_012106474v1 C 0 C 0 s saiBol1.JH378287 1274342 17 - 2905041 GAGGGAAGAGGTGGCAC i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1230954 17 - 2164891 GTGGGCAGAGGTGGCAC i cebCap1.NW_016107695v1 C 0 T 72 s aotNan1.NW_018494782v1 1484820 17 - 1813869 CTGGGAAGAGGTGGCAC i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10934224 794 - 12073884 I e calJac3.chr4 169860808 0 + 171630274 C e dasNov3.JH569188 539847 461 + 760995 I e colAng1.NW_012114488v1 15591273 0 - 23502949 C e canFam3.chr1 56157105 382 + 122678785 I e chlSab2.chr13 96652292 72 + 98384682 T e gorGor5.CYUI01015032v1 11457179 64 - 12463322 T a score=28271.000000 s hg38.chr6_KB021644v2_alt 84244 6 + 185823 GGGCCT s panTro5.chr6 173536606 6 + 175400573 GGGCCT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171775328 6 + 173848474 GGACCT i panPan2.chr6 C 0 C 0 s nomLeu3.chr3 156284451 6 + 157873769 GAGCCT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170310703 6 + 172585720 GGGCCT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169056541 6 - 170955103 GGGCCT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8343238 6 + 10161646 GGGCCT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1373883 6 + 3144229 GGGCCT i cerAty1.NW_012002071v1 C 0 C 0 s manLeu1.NW_012106474v1 8196982 6 - 10857215 AGGCCT i manLeu1.NW_012106474v1 C 0 C 0 s saiBol1.JH378287 1274359 6 - 2905041 AGGACT i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1230899 6 - 2164891 GGGCCT i cebCap1.NW_016107695v1 T 72 C 0 s aotNan1.NW_018494782v1 1484837 6 - 1813869 AGGACT i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10934224 794 - 12073884 I e calJac3.chr4 169860808 0 + 171630274 C e dasNov3.JH569188 539847 461 + 760995 I e colAng1.NW_012114488v1 15591273 0 - 23502949 C e canFam3.chr1 56157105 382 + 122678785 I e chlSab2.chr13 96652292 72 + 98384682 T e gorGor5.CYUI01015032v1 11457179 64 - 12463322 T a score=8536.000000 s hg38.chr6_KB021644v2_alt 84250 2 + 185823 TG s panTro5.chr6 173536612 2 + 175400573 TG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171775334 2 + 173848474 TG i panPan2.chr6 C 0 C 0 s nomLeu3.chr3 156284457 2 + 157873769 TG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170310709 2 + 172585720 CG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169056547 2 - 170955103 CG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8343244 2 + 10161646 CG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1373889 2 + 3144229 CA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96652220 2 + 98384682 TG i chlSab2.chr13 T 72 C 0 s manLeu1.NW_012106474v1 8196988 2 - 10857215 CG i manLeu1.NW_012106474v1 C 0 C 0 s saiBol1.JH378287 1274365 2 - 2905041 TG i saiBol1.JH378287 C 0 T 72 s cebCap1.NW_016107695v1 1230905 2 - 2164891 TG i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1484843 2 - 1813869 TG i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10934224 794 - 12073884 I e calJac3.chr4 169860808 0 + 171630274 C e dasNov3.JH569188 539847 461 + 760995 I e colAng1.NW_012114488v1 15591273 0 - 23502949 C e canFam3.chr1 56157105 382 + 122678785 I e gorGor5.CYUI01015032v1 11457179 64 - 12463322 T a score=145668.000000 s hg38.chr6_KB021644v2_alt 84252 21 + 185823 TGGGCAGAGGTGGCACGGGCC s panTro5.chr6 173536614 21 + 175400573 TGGGCAGAGGTGGCATGGGCC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171775336 21 + 173848474 TGGGCAGAGGTGGCATGGGCC i panPan2.chr6 C 0 C 0 s nomLeu3.chr3 156284459 21 + 157873769 TGGGCAGAGGTGGCACGGGCC i nomLeu3.chr3 C 0 T 46 s rheMac8.chr4 170310711 21 + 172585720 TGGGCAGAGGTGGCACGGGCC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169056549 21 - 170955103 TGGGCAGAGGTGGCACGGGCC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8343246 21 + 10161646 TGGGCAGAGGTGGCACGGGCC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1373891 21 + 3144229 TGGGCAGAGGTGGCACGGGTC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96652222 21 + 98384682 TGGGCAGAGGTGGCACGGGCC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8196990 21 - 10857215 TGGGCAGAGGTGGCATGGGCC i manLeu1.NW_012106474v1 C 0 C 0 s saiBol1.JH378287 1274295 21 - 2905041 TGGGCAGAGGTGGCACATGCC i saiBol1.JH378287 T 72 C 0 s cebCap1.NW_016107695v1 1230907 21 - 2164891 TGGGCAGAGGAGGCACAGGCC i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1484845 21 - 1813869 TGGGCAGAGGTGGCACAGGCC i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10934224 794 - 12073884 I e calJac3.chr4 169860808 0 + 171630274 C e dasNov3.JH569188 539847 461 + 760995 I e colAng1.NW_012114488v1 15591273 0 - 23502949 C e canFam3.chr1 56157105 382 + 122678785 I e gorGor5.CYUI01015032v1 11457179 64 - 12463322 T a score=6006.000000 s hg38.chr6_KB021644v2_alt 84273 1 + 185823 T s panTro5.chr6 173536635 1 + 175400573 T i panTro5.chr6 C 0 C 0 s panPan2.chr6 171775357 1 + 173848474 T i panPan2.chr6 C 0 T 72 s rheMac8.chr4 170310732 1 + 172585720 T i rheMac8.chr4 C 0 T 120 s macFas5.chr4 169056570 1 - 170955103 T i macFas5.chr4 C 0 T 120 s macNem1.NW_012011000v1 8343267 1 + 10161646 T i macNem1.NW_012011000v1 C 0 T 120 s cerAty1.NW_012002071v1 1373912 1 + 3144229 T i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96652243 1 + 98384682 T i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8197011 1 - 10857215 T i manLeu1.NW_012106474v1 C 0 C 0 s saiBol1.JH378287 1274316 1 - 2905041 T i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1230928 1 - 2164891 T i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1484866 1 - 1813869 T i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10934224 794 - 12073884 I e calJac3.chr4 169860808 0 + 171630274 C e dasNov3.JH569188 539847 461 + 760995 I e colAng1.NW_012114488v1 15591273 0 - 23502949 C e canFam3.chr1 56157105 382 + 122678785 I e nomLeu3.chr3 156284480 46 + 157873769 T e gorGor5.CYUI01015032v1 11457179 64 - 12463322 T a score=41129.000000 s hg38.chr6_KB021644v2_alt 84274 8 + 185823 TGTGCGCA s panTro5.chr6 173536636 8 + 175400573 TGTGGGCA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171775286 8 + 173848474 TGTGGGCA i panPan2.chr6 T 72 C 0 s rheMac8.chr4 170310613 8 + 172585720 TGTGGGCA i rheMac8.chr4 T 120 C 0 s macFas5.chr4 169056451 8 - 170955103 TGTGGGCA i macFas5.chr4 T 120 C 0 s macNem1.NW_012011000v1 8343148 8 + 10161646 TGTGGGCA i macNem1.NW_012011000v1 T 120 C 0 s cerAty1.NW_012002071v1 1373913 8 + 3144229 CATGGGCA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96652244 8 + 98384682 TGTGGGCA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8197012 8 - 10857215 CATTGGCA i manLeu1.NW_012106474v1 C 0 C 0 s saiBol1.JH378287 1274317 8 - 2905041 TGTGGGCA i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1230929 8 - 2164891 TGTGGGCA i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1484867 8 - 1813869 TGTGGGCA i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10934224 794 - 12073884 I e calJac3.chr4 169860808 0 + 171630274 C e dasNov3.JH569188 539847 461 + 760995 I e colAng1.NW_012114488v1 15591273 0 - 23502949 C e canFam3.chr1 56157105 382 + 122678785 I e nomLeu3.chr3 156284480 46 + 157873769 T e gorGor5.CYUI01015032v1 11457179 64 - 12463322 T a score=98364.000000 s hg38.chr6_KB021644v2_alt 84282 16 + 185823 GAGGTGGCACGGACCT s panTro5.chr6 173536644 16 + 175400573 GAGGTGGCATGGACCT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171775294 16 + 173848474 GAGGTGGCATGGACCT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11457115 16 - 12463322 GAGGTGGCATGGGCCT i gorGor5.CYUI01015032v1 T 64 C 0 s rheMac8.chr4 170310621 16 + 172585720 GAGGTGGCACGGGTCT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169056459 16 - 170955103 GAGGTGGCACGGGCCT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8343156 16 + 10161646 GAGGTGGCACGGGCCT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1373921 16 + 3144229 GAGGTGGCACGGGTCT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96652252 16 + 98384682 GAGGTGGCATGGGCCT i chlSab2.chr13 C 0 T 72 s manLeu1.NW_012106474v1 8197020 16 - 10857215 GAGGTGGCACAGGCCT i manLeu1.NW_012106474v1 C 0 C 0 s saiBol1.JH378287 1274325 16 - 2905041 GAGGAGGCACGGGCCT i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1230937 16 - 2164891 GAGGAGGCACTGGCCT i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1484875 16 - 1813869 GAGGAGGCACGGGCTT i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10934224 794 - 12073884 I e calJac3.chr4 169860808 0 + 171630274 C e dasNov3.JH569188 539847 461 + 760995 I e colAng1.NW_012114488v1 15591273 0 - 23502949 C e canFam3.chr1 56157105 382 + 122678785 I e nomLeu3.chr3 156284480 46 + 157873769 T a score=5634.000000 s hg38.chr6_KB021644v2_alt 84298 1 + 185823 T s panTro5.chr6 173536660 1 + 175400573 T i panTro5.chr6 C 0 C 0 s panPan2.chr6 171775310 1 + 173848474 T i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11457131 1 - 12463322 T i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170310637 1 + 172585720 T i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169056475 1 - 170955103 T i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8343172 1 + 10161646 T i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1373937 1 + 3144229 C i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96652196 1 + 98384682 T i chlSab2.chr13 T 72 C 0 s manLeu1.NW_012106474v1 8197036 1 - 10857215 T i manLeu1.NW_012106474v1 C 0 C 0 s saiBol1.JH378287 1274341 1 - 2905041 T i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1230953 1 - 2164891 T i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1484891 1 - 1813869 T i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10934224 794 - 12073884 I e calJac3.chr4 169860808 0 + 171630274 C e dasNov3.JH569188 539847 461 + 760995 I e colAng1.NW_012114488v1 15591273 0 - 23502949 C e canFam3.chr1 56157105 382 + 122678785 I e nomLeu3.chr3 156284480 46 + 157873769 T a score=173719.000000 s hg38.chr6_KB021644v2_alt 84299 23 + 185823 GTGGGCAGAGGTGGCACGGGCCT s panTro5.chr6 173536661 23 + 175400573 GTGGGCAGAGGTGGCACGGGCCT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171775311 23 + 173848474 GTGGGCAGAGGTGGCACGGACCT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11457132 23 - 12463322 GTGGGCAGAGGTGGCACGGGCCT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156284434 23 + 157873769 GTGGGCAGAGGTGGCATGAGCCT i nomLeu3.chr3 T 46 C 0 s rheMac8.chr4 170310638 23 + 172585720 GTGGGCAAAGGTGGCTCGGGCCT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169056476 23 - 170955103 GTGGGCAAAGGTGGCTCGGGCCT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8343173 23 + 10161646 GTGGGCAAAGGTGGCTCGGGCCT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1373938 23 + 3144229 GTGGGCAGAGGTGGCACGGGCCT i cerAty1.NW_012002071v1 C 0 T 96 s chlSab2.chr13 96652197 23 + 98384682 GTGGGCAGAGGTGGCATGGGCCT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8197037 23 - 10857215 GTGGGCAGAGGTGGCATGGGCCT i manLeu1.NW_012106474v1 C 0 C 0 s saiBol1.JH378287 1274342 23 - 2905041 GAGGGAAGAGGTGGCACAGGACT i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1230954 23 - 2164891 GTGGGCAGAGGTGGCACGGGCCT i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1484892 23 - 1813869 GTGGGCAGAGGTGGCACAGGCCT i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10934224 794 - 12073884 I e calJac3.chr4 169860808 0 + 171630274 C e dasNov3.JH569188 539847 461 + 760995 I e colAng1.NW_012114488v1 15591273 0 - 23502949 C e canFam3.chr1 56157105 382 + 122678785 I a score=10278.000000 s hg38.chr6_KB021644v2_alt 84322 2 + 185823 TG s panTro5.chr6 173536684 2 + 175400573 TG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171775334 2 + 173848474 TG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11457155 2 - 12463322 TG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156284457 2 + 157873769 TG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170310661 2 + 172585720 CG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169056499 2 - 170955103 CG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8343196 2 + 10161646 CG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1373865 2 + 3144229 CG i cerAty1.NW_012002071v1 T 96 C 0 s chlSab2.chr13 96652220 2 + 98384682 TG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8197060 2 - 10857215 CA i manLeu1.NW_012106474v1 C 0 C 0 s saiBol1.JH378287 1274365 2 - 2905041 TG i saiBol1.JH378287 C 0 T 117 s cebCap1.NW_016107695v1 1230977 2 - 2164891 TG i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1484915 2 - 1813869 TG i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10934224 794 - 12073884 I e calJac3.chr4 169860808 0 + 171630274 C e dasNov3.JH569188 539847 461 + 760995 I e colAng1.NW_012114488v1 15591273 0 - 23502949 C e canFam3.chr1 56157105 382 + 122678785 I a score=17430.000000 s hg38.chr6_KB021644v2_alt 84324 3 + 185823 TGC s panTro5.chr6 173536686 3 + 175400573 TGG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171775336 3 + 173848474 TGG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11457157 3 - 12463322 TGG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156284459 3 + 157873769 TGG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170310663 3 + 172585720 TGG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169056501 3 - 170955103 TGG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8343198 3 + 10161646 TGG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1373867 3 + 3144229 TGG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96652222 3 + 98384682 TGG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8197062 3 - 10857215 TTG i manLeu1.NW_012106474v1 C 0 C 0 s cebCap1.NW_016107695v1 1230979 3 - 2164891 TGG i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1484917 3 - 1813869 TGG i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10934224 794 - 12073884 I e saiBol1.JH378287 1274367 117 - 2905041 T e calJac3.chr4 169860808 0 + 171630274 C e dasNov3.JH569188 539847 461 + 760995 I e colAng1.NW_012114488v1 15591273 0 - 23502949 C e canFam3.chr1 56157105 382 + 122678785 I a score=132380.000000 s hg38.chr6_KB021644v2_alt 84327 18 + 185823 GCAGAGGTGGCATGGGCC s panTro5.chr6 173536689 18 + 175400573 GCAGAGGTGGCATGGGCC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171775339 18 + 173848474 GCAGAGGTGGCATGGGCC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11457160 18 - 12463322 GCAGAGGTGGCATGGGCC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156284462 18 + 157873769 GCAGAGGTGGCACGGGCC i nomLeu3.chr3 C 0 T 46 s rheMac8.chr4 170310666 18 + 172585720 GCAGAGGTGGCATAGGCC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169056504 18 - 170955103 GCAGAGGTGGCATAGGCC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8343201 18 + 10161646 GTAGAGGTGGCATAGGCC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1373870 18 + 3144229 GCAGAGGTGGCATGGGCC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96652225 18 + 98384682 GCAGAGGTGGCACGGGCC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8197065 18 - 10857215 GCAGAGGTGGCACAGGCC i manLeu1.NW_012106474v1 C 0 C 0 s saiBol1.JH378287 1274250 18 - 2905041 GCAGAGGAGGCACGGGCC i saiBol1.JH378287 T 117 C 0 s cebCap1.NW_016107695v1 1230982 18 - 2164891 GCAGAGGAGGCACGGGCC i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1484920 17 - 1813869 GCAGAGGAGGCA-GGGTC i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10934224 794 - 12073884 I e calJac3.chr4 169860808 0 + 171630274 C e dasNov3.JH569188 539847 461 + 760995 I e colAng1.NW_012114488v1 15591273 0 - 23502949 C e canFam3.chr1 56157105 382 + 122678785 I a score=7098.000000 s hg38.chr6_KB021644v2_alt 84345 1 + 185823 T s panTro5.chr6 173536707 1 + 175400573 T i panTro5.chr6 C 0 T 72 s panPan2.chr6 171775357 1 + 173848474 T i panPan2.chr6 C 0 T 119 s gorGor5.CYUI01015032v1 11457178 1 - 12463322 T i gorGor5.CYUI01015032v1 C 0 T 64 s rheMac8.chr4 170310684 1 + 172585720 T i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169056522 1 - 170955103 T i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8343219 1 + 10161646 T i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1373888 1 + 3144229 T i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96652243 1 + 98384682 T i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8197083 1 - 10857215 T i manLeu1.NW_012106474v1 C 0 C 0 s saiBol1.JH378287 1274268 1 - 2905041 T i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1231000 1 - 2164891 T i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1484937 1 - 1813869 T i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10934224 794 - 12073884 I e calJac3.chr4 169860808 0 + 171630274 C e dasNov3.JH569188 539847 461 + 760995 I e colAng1.NW_012114488v1 15591273 0 - 23502949 C e canFam3.chr1 56157105 382 + 122678785 I e nomLeu3.chr3 156284480 46 + 157873769 T a score=2818.000000 s hg38.chr6_KB021644v2_alt 84346 1 + 185823 T s panTro5.chr6 173536636 1 + 175400573 T i panTro5.chr6 T 72 C 0 s rheMac8.chr4 170310685 1 + 172585720 T i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169056523 1 - 170955103 T i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8343220 1 + 10161646 T i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1373889 1 + 3144229 C i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96652244 1 + 98384682 T i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8197084 1 - 10857215 C i manLeu1.NW_012106474v1 C 0 C 0 s saiBol1.JH378287 1274269 1 - 2905041 T i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1231001 1 - 2164891 T i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1484938 1 - 1813869 T i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10934224 794 - 12073884 I e calJac3.chr4 169860808 0 + 171630274 C e dasNov3.JH569188 539847 461 + 760995 I e colAng1.NW_012114488v1 15591273 0 - 23502949 C e canFam3.chr1 56157105 382 + 122678785 I e nomLeu3.chr3 156284480 46 + 157873769 T e gorGor5.CYUI01015032v1 11457179 64 - 12463322 T e panPan2.chr6 171775358 119 + 173848474 T a score=27148.000000 s hg38.chr6_KB021644v2_alt 84347 7 + 185823 GTGGGAA s panTro5.chr6 173536637 7 + 175400573 GTGGGCA i panTro5.chr6 C 0 C 0 s nomLeu3.chr3 156284434 7 + 157873769 GTGGGCA i nomLeu3.chr3 T 46 C 0 s rheMac8.chr4 170310686 7 + 172585720 GTGAGTA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169056524 7 - 170955103 GTGAGTA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8343221 7 + 10161646 GTGAGTA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1373890 7 + 3144229 ATGGGCA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96652245 7 + 98384682 GTGGGCA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8197085 7 - 10857215 GTGGGCA i manLeu1.NW_012106474v1 C 0 C 0 s saiBol1.JH378287 1274270 7 - 2905041 GGGGGAA i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1231002 7 - 2164891 GTGGGCA i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1484939 7 - 1813869 CTGGGAA i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10934224 794 - 12073884 I e calJac3.chr4 169860808 0 + 171630274 C e dasNov3.JH569188 539847 461 + 760995 I e colAng1.NW_012114488v1 15591273 0 - 23502949 C e canFam3.chr1 56157105 382 + 122678785 I e gorGor5.CYUI01015032v1 11457179 64 - 12463322 T e panPan2.chr6 171775358 119 + 173848474 T a score=68094.000000 s hg38.chr6_KB021644v2_alt 84354 9 + 185823 GAGGTGGCA s panTro5.chr6 173536644 9 + 175400573 GAGGTGGCA i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11457115 9 - 12463322 GAGGTGGCA i gorGor5.CYUI01015032v1 T 64 C 0 s nomLeu3.chr3 156284441 9 + 157873769 GAGGTGGCA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170310693 9 + 172585720 GAGGTGGCA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169056531 9 - 170955103 GAGGTGGCA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8343228 9 + 10161646 GAGGTGGCA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1373897 9 + 3144229 GAGGTGGCA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96652252 9 + 98384682 GAGGTGGCA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8197092 9 - 10857215 GAGGTGGCA i manLeu1.NW_012106474v1 C 0 C 0 s saiBol1.JH378287 1274277 9 - 2905041 GAGGTGGCA i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1231009 9 - 2164891 GAGGTGGCA i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1484946 9 - 1813869 GAGGTGGCA i aotNan1.NW_018494782v1 C 0 T 119 e otoGar3.GL873575 10934224 794 - 12073884 I e calJac3.chr4 169860808 0 + 171630274 C e dasNov3.JH569188 539847 461 + 760995 I e colAng1.NW_012114488v1 15591273 0 - 23502949 C e canFam3.chr1 56157105 382 + 122678785 I e panPan2.chr6 171775358 119 + 173848474 T a score=36998.000000 s hg38.chr6_KB021644v2_alt 84363 8 + 185823 TGGGCCTT s panTro5.chr6 173536653 8 + 175400573 TGGACCTT i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11457124 8 - 12463322 TGGGCCTT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156284450 8 + 157873769 TGAGCCTT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170310702 8 + 172585720 TGGGCCTC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169056540 8 - 170955103 TGGGCCTC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8343237 8 + 10161646 TGGGCCTC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1373906 8 + 3144229 CGGGTCTC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96652261 8 + 98384682 TGGGCCTC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8197101 8 - 10857215 TGGGCCTC i manLeu1.NW_012106474v1 C 0 C 0 s saiBol1.JH378287 1274286 8 - 2905041 CATGCCTT i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1231018 8 - 2164891 AGGGCCTT i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1484836 8 - 1813869 CAGGACTT i aotNan1.NW_018494782v1 T 119 C 0 e otoGar3.GL873575 10934224 794 - 12073884 I e calJac3.chr4 169860808 0 + 171630274 C e dasNov3.JH569188 539847 461 + 760995 I e colAng1.NW_012114488v1 15591273 0 - 23502949 C e canFam3.chr1 56157105 382 + 122678785 I e panPan2.chr6 171775358 119 + 173848474 T a score=180711.000000 s hg38.chr6_KB021644v2_alt 84371 22 + 185823 GTGGGCAGAGGTGGCACGGGCC s panTro5.chr6 173536661 22 + 175400573 GTGGGCAGAGGTGGCACGGGCC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171775239 22 + 173848474 GTGGGCAGAGGTGGCACGGGCC i panPan2.chr6 T 119 C 0 s gorGor5.CYUI01015032v1 11457132 22 - 12463322 GTGGGCAGAGGTGGCACGGGCC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156284458 22 + 157873769 GTGGGCAGAGGTGGCACGGGCC i nomLeu3.chr3 C 0 T 24 s rheMac8.chr4 170310710 22 + 172585720 GTGGGCAGAGGTGGCACGGGCC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169056548 22 - 170955103 GTGGGCAGAGGTGGCACGGGCC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8343245 22 + 10161646 GTGGGCAGAGGTGGCACGGGCC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1373914 22 + 3144229 ATGGGCAGAGGTGGCACGGGTC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96652269 22 + 98384682 ATAGGCAGAGGTGGCACGGGCC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8197109 22 - 10857215 ATGGGCAGAGGTGGCATGGGCC i manLeu1.NW_012106474v1 C 0 C 0 s saiBol1.JH378287 1274294 22 - 2905041 GTGGGCAGAGGTGGCACATGCC i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1231026 22 - 2164891 GTGGGCAGAGGTGGCACGGGCC i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1484844 22 - 1813869 GTGGGCAGAGGTGGCACAGGCC i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10934224 794 - 12073884 I e calJac3.chr4 169860808 0 + 171630274 C e dasNov3.JH569188 539847 461 + 760995 I e colAng1.NW_012114488v1 15591273 0 - 23502949 C e canFam3.chr1 56157105 382 + 122678785 I a score=8281.000000 s hg38.chr6_KB021644v2_alt 84393 1 + 185823 T s panTro5.chr6 173536683 1 + 175400573 T i panTro5.chr6 C 0 C 0 s panPan2.chr6 171775261 1 + 173848474 T i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11457154 1 - 12463322 T i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156284456 1 + 157873769 T i nomLeu3.chr3 T 24 C 0 s rheMac8.chr4 170310732 1 + 172585720 T i rheMac8.chr4 C 0 T 96 s macFas5.chr4 169056570 1 - 170955103 T i macFas5.chr4 C 0 T 96 s macNem1.NW_012011000v1 8343267 1 + 10161646 T i macNem1.NW_012011000v1 C 0 T 96 s cerAty1.NW_012002071v1 1373936 1 + 3144229 T i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96652291 1 + 98384682 T i chlSab2.chr13 C 0 T 48 s manLeu1.NW_012106474v1 8197131 1 - 10857215 T i manLeu1.NW_012106474v1 C 0 C 0 s saiBol1.JH378287 1274316 1 - 2905041 T i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1231048 1 - 2164891 T i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1484866 1 - 1813869 T i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10934224 794 - 12073884 I e calJac3.chr4 169860808 0 + 171630274 C e dasNov3.JH569188 539847 461 + 760995 I e colAng1.NW_012114488v1 15591273 0 - 23502949 C e canFam3.chr1 56157105 382 + 122678785 I a score=133143.000000 s hg38.chr6_KB021644v2_alt 84394 18 + 185823 TGTGGGCAGAGGTGGCAC s panTro5.chr6 173536684 18 + 175400573 TGTGGGCAGAGGTGGCAT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171775262 18 + 173848474 TGTGGGCAGAGGTGGCAC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11457155 18 - 12463322 TGTGGGCAGAGGTGGCAT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156284457 18 + 157873769 TGTGGGCAGAGGTGGCAC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170310637 18 + 172585720 TGTGGGCAAAGGTGGCTC i rheMac8.chr4 T 96 C 0 s macFas5.chr4 169056475 18 - 170955103 TGTGGGCAAAGGTGGCTC i macFas5.chr4 T 96 C 0 s macNem1.NW_012011000v1 8343172 18 + 10161646 TGTGGGCAAAGGTGGCTC i macNem1.NW_012011000v1 T 96 C 0 s cerAty1.NW_012002071v1 1373937 18 + 3144229 CGTGGGCAGAGGTGGCAC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96652244 18 + 98384682 TGTGGGCAGAGGTGGCAT i chlSab2.chr13 T 48 C 0 s manLeu1.NW_012106474v1 8197132 18 - 10857215 CGTGGGCAGAGGTGGCAC i manLeu1.NW_012106474v1 C 0 C 0 s saiBol1.JH378287 1274317 18 - 2905041 TGTGGGCAGAGGAGGCAC i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1231049 18 - 2164891 TGTGGGCAGAGGAGGCAC i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1484867 18 - 1813869 TGTGGGCAGAGGAGGCAC i aotNan1.NW_018494782v1 C 0 T 167 e otoGar3.GL873575 10934224 794 - 12073884 I e calJac3.chr4 169860808 0 + 171630274 C e dasNov3.JH569188 539847 461 + 760995 I e colAng1.NW_012114488v1 15591273 0 - 23502949 C e canFam3.chr1 56157105 382 + 122678785 I a score=39312.000000 s hg38.chr6_KB021644v2_alt 84412 5 + 185823 GGACC s panTro5.chr6 173536702 5 + 175400573 GGGCC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171775280 5 + 173848474 GGGCC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11457173 5 - 12463322 GGGCC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156284475 5 + 157873769 GGGCC i nomLeu3.chr3 C 0 T 46 s rheMac8.chr4 170310655 5 + 172585720 GGGCC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169056493 5 - 170955103 GGGCC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8343190 5 + 10161646 GGGCC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1373955 5 + 3144229 GGGCC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96652262 5 + 98384682 GGGCC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8197150 5 - 10857215 GGGTC i manLeu1.NW_012106474v1 C 0 C 0 s saiBol1.JH378287 1274335 5 - 2905041 GGGCC i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1231067 5 - 2164891 TGGCC i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1484718 5 - 1813869 GGGCC i aotNan1.NW_018494782v1 T 167 C 0 e otoGar3.GL873575 10934224 794 - 12073884 I e calJac3.chr4 169860808 0 + 171630274 C e dasNov3.JH569188 539847 461 + 760995 I e colAng1.NW_012114488v1 15591273 0 - 23502949 C e canFam3.chr1 56157105 382 + 122678785 I a score=7098.000000 s hg38.chr6_KB021644v2_alt 84417 1 + 185823 T s panTro5.chr6 173536707 1 + 175400573 T i panTro5.chr6 C 0 T 72 s panPan2.chr6 171775285 1 + 173848474 T i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11457178 1 - 12463322 T i gorGor5.CYUI01015032v1 C 0 T 64 s rheMac8.chr4 170310660 1 + 172585720 T i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169056498 1 - 170955103 T i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8343195 1 + 10161646 T i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1373960 1 + 3144229 T i cerAty1.NW_012002071v1 C 0 T 96 s chlSab2.chr13 96652267 1 + 98384682 T i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8197155 1 - 10857215 T i manLeu1.NW_012106474v1 C 0 C 0 s saiBol1.JH378287 1274340 1 - 2905041 T i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1231072 1 - 2164891 T i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1484723 1 - 1813869 T i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10934224 794 - 12073884 I e calJac3.chr4 169860808 0 + 171630274 C e dasNov3.JH569188 539847 461 + 760995 I e colAng1.NW_012114488v1 15591273 0 - 23502949 C e canFam3.chr1 56157105 382 + 122678785 I e nomLeu3.chr3 156284480 46 + 157873769 T a score=31266.000000 s hg38.chr6_KB021644v2_alt 84418 8 + 185823 TGTGGGAA s panTro5.chr6 173536636 8 + 175400573 TGTGGGCA i panTro5.chr6 T 72 C 0 s panPan2.chr6 171775286 8 + 173848474 TGTGGGCA i panPan2.chr6 C 0 C 0 s rheMac8.chr4 170310661 8 + 172585720 CGTGGGCA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169056499 8 - 170955103 CGTGGGCA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8343196 8 + 10161646 CGTGGGTA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1373865 8 + 3144229 CGTGGGCA i cerAty1.NW_012002071v1 T 96 C 0 s chlSab2.chr13 96652268 8 + 98384682 CATAGGCA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8197156 8 - 10857215 CATGGGCA i manLeu1.NW_012106474v1 C 0 C 0 s saiBol1.JH378287 1274341 8 - 2905041 TGAGGGAA i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1231073 8 - 2164891 TGTGGGCA i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1484724 8 - 1813869 TCTGGGAA i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10934224 794 - 12073884 I e calJac3.chr4 169860808 0 + 171630274 C e dasNov3.JH569188 539847 461 + 760995 I e colAng1.NW_012114488v1 15591273 0 - 23502949 C e canFam3.chr1 56157105 382 + 122678785 I e nomLeu3.chr3 156284480 46 + 157873769 T e gorGor5.CYUI01015032v1 11457179 64 - 12463322 T a score=104261.000000 s hg38.chr6_KB021644v2_alt 84426 16 + 185823 GAGGTGGCACGGGCCT s panTro5.chr6 173536644 16 + 175400573 GAGGTGGCATGGACCT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171775294 16 + 173848474 GAGGTGGCATGGACCT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11457115 16 - 12463322 GAGGTGGCATGGGCCT i gorGor5.CYUI01015032v1 T 64 C 0 s rheMac8.chr4 170310669 16 + 172585720 GAGGTGGCATAGGCCT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169056507 16 - 170955103 GAGGTGGCATAGGCCT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8343204 16 + 10161646 GAGGTGGCATAGGCCT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1373873 16 + 3144229 GAGGTGGCATGGGCCT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96652276 16 + 98384682 GAGGTGGCACGGGCCT i chlSab2.chr13 C 0 T 72 s manLeu1.NW_012106474v1 8197164 16 - 10857215 GAGGTGGCACGGGTCT i manLeu1.NW_012106474v1 C 0 C 0 s saiBol1.JH378287 1274349 16 - 2905041 GAGGTGGCACAGGACT i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1231081 16 - 2164891 GAGGTGGCATGGGCCT i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1484732 16 - 1813869 GAGGTGGCACAGGCCT i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10934224 794 - 12073884 I e calJac3.chr4 169860808 0 + 171630274 C e dasNov3.JH569188 539847 461 + 760995 I e colAng1.NW_012114488v1 15591273 0 - 23502949 C e canFam3.chr1 56157105 382 + 122678785 I e nomLeu3.chr3 156284480 46 + 157873769 T a score=4423.000000 s hg38.chr6_KB021644v2_alt 84442 1 + 185823 T s panTro5.chr6 173536660 1 + 175400573 T i panTro5.chr6 C 0 C 0 s panPan2.chr6 171775310 1 + 173848474 T i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11457131 1 - 12463322 T i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170310685 1 + 172585720 T i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169056523 1 - 170955103 T i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8343220 1 + 10161646 T i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1373889 1 + 3144229 C i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96652220 1 + 98384682 T i chlSab2.chr13 T 72 C 0 s manLeu1.NW_012106474v1 8197180 1 - 10857215 C i manLeu1.NW_012106474v1 C 0 C 0 s saiBol1.JH378287 1274365 1 - 2905041 T i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1231097 1 - 2164891 T i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1484748 1 - 1813869 T i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10934224 794 - 12073884 I e calJac3.chr4 169860808 0 + 171630274 C e dasNov3.JH569188 539847 461 + 760995 I e colAng1.NW_012114488v1 15591273 0 - 23502949 C e canFam3.chr1 56157105 382 + 122678785 I e nomLeu3.chr3 156284480 46 + 157873769 T a score=5947.000000 s hg38.chr6_KB021644v2_alt 84443 1 + 185823 G s panTro5.chr6 173536661 1 + 175400573 G i panTro5.chr6 C 0 C 0 s panPan2.chr6 171775311 1 + 173848474 G i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11457132 1 - 12463322 G i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156284434 1 + 157873769 G i nomLeu3.chr3 T 46 C 0 s rheMac8.chr4 170310686 1 + 172585720 G i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169056524 1 - 170955103 G i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8343221 1 + 10161646 G i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1373890 1 + 3144229 A i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96652221 1 + 98384682 G i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8197181 1 - 10857215 A i manLeu1.NW_012106474v1 C 0 C 0 s saiBol1.JH378287 1274366 1 - 2905041 G i saiBol1.JH378287 C 0 T 72 s cebCap1.NW_016107695v1 1231098 1 - 2164891 G i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1484749 1 - 1813869 G i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10934224 794 - 12073884 I e calJac3.chr4 169860808 0 + 171630274 C e dasNov3.JH569188 539847 461 + 760995 I e colAng1.NW_012114488v1 15591273 0 - 23502949 C e canFam3.chr1 56157105 382 + 122678785 I a score=118569.000000 s hg38.chr6_KB021644v2_alt 84444 15 + 185823 TGGGCAGAGGTGGCA s panTro5.chr6 173536662 15 + 175400573 TGGGCAGAGGTGGCA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171775312 15 + 173848474 TGGGCAGAGGTGGCA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11457133 15 - 12463322 TGGGCAGAGGTGGCA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156284435 15 + 157873769 TGGGCAGAGGTGGCA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170310687 15 + 172585720 TGAGTAGAGGTGGCA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169056525 15 - 170955103 TGAGTAGAGGTGGCA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8343222 15 + 10161646 TGAGTAGAGGTGGCA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1373891 15 + 3144229 TGGGCAGAGGTGGCA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96652222 15 + 98384682 TGGGCAGAGGTGGCA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8197182 15 - 10857215 TGGGCAGAGGTGGCA i manLeu1.NW_012106474v1 C 0 C 0 s saiBol1.JH378287 1274295 15 - 2905041 TGGGCAGAGGTGGCA i saiBol1.JH378287 T 72 C 0 s cebCap1.NW_016107695v1 1231099 15 - 2164891 TGGGCAGAGGAGGCA i cebCap1.NW_016107695v1 C 0 T 192 s aotNan1.NW_018494782v1 1484750 15 - 1813869 TGGGCAGAGGAGGCA i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10934224 794 - 12073884 I e calJac3.chr4 169860808 0 + 171630274 C e dasNov3.JH569188 539847 461 + 760995 I e colAng1.NW_012114488v1 15591273 0 - 23502949 C e canFam3.chr1 56157105 382 + 122678785 I a score=45449.000000 s hg38.chr6_KB021644v2_alt 84459 8 + 185823 CGGACCTT s panTro5.chr6 173536677 8 + 175400573 CGGGCCTT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171775327 8 + 173848474 CGGACCTT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11457148 8 - 12463322 CGGGCCTT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156284450 8 + 157873769 TGAGCCTT i nomLeu3.chr3 C 0 T 24 s rheMac8.chr4 170310702 8 + 172585720 TGGGCCTC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169056540 8 - 170955103 TGGGCCTC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8343237 8 + 10161646 TGGGCCTC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1373906 8 + 3144229 CGGGTCTC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96652237 8 + 98384682 CGGGCCTT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8197197 8 - 10857215 CGGATCTC i manLeu1.NW_012106474v1 C 0 C 0 s saiBol1.JH378287 1274310 8 - 2905041 CATGCCTT i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1230922 8 - 2164891 CAGGCCTT i cebCap1.NW_016107695v1 T 192 C 0 s aotNan1.NW_018494782v1 1484765 8 - 1813869 CGGGCCTT i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10934224 794 - 12073884 I e calJac3.chr4 169860808 0 + 171630274 C e dasNov3.JH569188 539847 461 + 760995 I e colAng1.NW_012114488v1 15591273 0 - 23502949 C e canFam3.chr1 56157105 382 + 122678785 I a score=134666.000000 s hg38.chr6_KB021644v2_alt 84467 16 + 185823 GTGGGCAGAGGTGGCA s panTro5.chr6 173536685 16 + 175400573 GTGGGCAGAGGTGGCA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171775335 16 + 173848474 GTGGGCAGAGGTGGCA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11457156 16 - 12463322 GTGGGCAGAGGTGGCA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156284434 16 + 157873769 GTGGGCAGAGGTGGCA i nomLeu3.chr3 T 24 C 0 s rheMac8.chr4 170310710 16 + 172585720 GTGGGCAGAGGTGGCA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169056548 16 - 170955103 GTGGGCAGAGGTGGCA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8343245 16 + 10161646 GTGGGCAGAGGTGGCA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1373914 16 + 3144229 ATGGGCAGAGGTGGCA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96652245 16 + 98384682 GTGGGCAGAGGTGGCA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8197205 16 - 10857215 GTGGGCAGAGGTGGCA i manLeu1.NW_012106474v1 C 0 C 0 s saiBol1.JH378287 1274318 16 - 2905041 GTGGGCAGAGGAGGCA i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1230930 16 - 2164891 GTGGGCAGAGGAGGCA i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1484773 16 - 1813869 GTGGGCAGAGGTGGCA i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10934224 794 - 12073884 I e calJac3.chr4 169860808 0 + 171630274 C e dasNov3.JH569188 539847 461 + 760995 I e colAng1.NW_012114488v1 15591273 0 - 23502949 C e canFam3.chr1 56157105 382 + 122678785 I a score=53503.000000 s hg38.chr6_KB021644v2_alt 84483 7 + 185823 CGGGCCT s panTro5.chr6 173536701 7 + 175400573 TGGGCCT i panTro5.chr6 C 0 T 191 s panPan2.chr6 171775351 7 + 173848474 TGGGCCT i panPan2.chr6 C 0 T 72 s gorGor5.CYUI01015032v1 11457172 7 - 12463322 TGGGCCT i gorGor5.CYUI01015032v1 C 0 T 64 s nomLeu3.chr3 156284450 7 + 157873769 TGAGCCT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170310726 7 + 172585720 CGGGCCT i rheMac8.chr4 C 0 T 72 s macFas5.chr4 169056564 7 - 170955103 CGGGCCT i macFas5.chr4 C 0 T 72 s macNem1.NW_012011000v1 8343261 7 + 10161646 CGGGCCT i macNem1.NW_012011000v1 C 0 T 96 s cerAty1.NW_012002071v1 1373930 7 + 3144229 CGGGTCT i cerAty1.NW_012002071v1 C 0 T 240 s chlSab2.chr13 96652261 7 + 98384682 TGGGCCT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8197221 7 - 10857215 CGGGCCT i manLeu1.NW_012106474v1 C 0 T 192 s calJac3.chr4 169860808 7 + 171630274 CTGGTCT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1274334 7 - 2905041 CGGGCCT i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1230946 7 - 2164891 CTGGCCT i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1484789 7 - 1813869 CAGGCCT i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10934224 794 - 12073884 I e dasNov3.JH569188 539847 461 + 760995 I e colAng1.NW_012114488v1 15591273 0 - 23502949 C e canFam3.chr1 56157105 382 + 122678785 I a score=3785.000000 s hg38.chr6_KB021644v2_alt 84490 1 + 185823 T s panPan2.chr6 171775286 1 + 173848474 T i panPan2.chr6 T 72 C 0 s nomLeu3.chr3 156284457 1 + 157873769 T i nomLeu3.chr3 C 0 C 0 s macNem1.NW_012011000v1 8343172 1 + 10161646 T i macNem1.NW_012011000v1 T 96 C 0 s cerAty1.NW_012002071v1 1373697 1 + 3144229 T i cerAty1.NW_012002071v1 T 240 C 0 s chlSab2.chr13 96652268 1 + 98384682 C i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8197036 1 - 10857215 T i manLeu1.NW_012106474v1 T 192 C 0 s calJac3.chr4 169860815 1 + 171630274 T i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1274341 1 - 2905041 T i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1230953 1 - 2164891 T i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1484796 1 - 1813869 T i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10934224 794 - 12073884 I e dasNov3.JH569188 539847 461 + 760995 I e colAng1.NW_012114488v1 15591273 0 - 23502949 C e canFam3.chr1 56157105 382 + 122678785 I e rheMac8.chr4 170310733 72 + 172585720 T e gorGor5.CYUI01015032v1 11457179 64 - 12463322 T e macFas5.chr4 169056571 72 - 170955103 T e panTro5.chr6 173536708 191 + 175400573 T a score=87450.000000 s hg38.chr6_KB021644v2_alt 84491 16 + 185823 GTGGGCAGAGGTGGCA s panTro5.chr6 173536517 16 + 175400573 GTGGGCAGAGGTGGCA i panTro5.chr6 T 191 C 0 s panPan2.chr6 171775287 16 + 173848474 GTGGGCAGAGGTGGCA i panPan2.chr6 C 0 C 0 s nomLeu3.chr3 156284458 16 + 157873769 GTGGGCAGAGGTGGCA i nomLeu3.chr3 C 0 C 0 s macNem1.NW_012011000v1 8343173 16 + 10161646 GTGGGCAAAGGTGGCT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1373698 16 + 3144229 GTGGGCAGAGGTGGCA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96652269 16 + 98384682 ATAGGCAGAGGTGGCA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8197037 16 - 10857215 GTGGGCAGAGGTGGCA i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169860816 16 + 171630274 GTGGGCAGAGGTGGTA i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1274342 16 - 2905041 GAGGGAAGAGGTGGCA i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1230954 16 - 2164891 GTGGGCAGAGGTGGCA i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1484797 16 - 1813869 GTGGGCAGAGGAGGCA i aotNan1.NW_018494782v1 C 0 T 95 e otoGar3.GL873575 10934224 794 - 12073884 I e dasNov3.JH569188 539847 461 + 760995 I e colAng1.NW_012114488v1 15591273 0 - 23502949 C e canFam3.chr1 56157105 382 + 122678785 I e rheMac8.chr4 170310733 72 + 172585720 T e gorGor5.CYUI01015032v1 11457179 64 - 12463322 T e macFas5.chr4 169056571 72 - 170955103 T a score=21610.000000 s hg38.chr6_KB021644v2_alt 84507 6 + 185823 CGGACC s panTro5.chr6 173536533 6 + 175400573 CGGGCC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171775303 6 + 173848474 TGGACC i panPan2.chr6 C 0 C 0 s nomLeu3.chr3 156284474 6 + 157873769 CGGGCC i nomLeu3.chr3 C 0 T 46 s macNem1.NW_012011000v1 8343189 6 + 10161646 CGGGCC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1373714 6 + 3144229 CGGGCC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96652285 6 + 98384682 CGGGCC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8197053 6 - 10857215 TGGGCC i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169860832 6 + 171630274 CTGGTC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1274358 6 - 2905041 CAGGAC i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1230970 6 - 2164891 CGGGCC i cebCap1.NW_016107695v1 C 0 C 0 e otoGar3.GL873575 10934224 794 - 12073884 I e aotNan1.NW_018494782v1 1484813 95 - 1813869 T e dasNov3.JH569188 539847 461 + 760995 I e colAng1.NW_012114488v1 15591273 0 - 23502949 C e canFam3.chr1 56157105 382 + 122678785 I e rheMac8.chr4 170310733 72 + 172585720 T e gorGor5.CYUI01015032v1 11457179 64 - 12463322 T e macFas5.chr4 169056571 72 - 170955103 T a score=4095.000000 s hg38.chr6_KB021644v2_alt 84513 1 + 185823 T s panTro5.chr6 173536539 1 + 175400573 T i panTro5.chr6 C 0 C 0 s panPan2.chr6 171775309 1 + 173848474 T i panPan2.chr6 C 0 C 0 s macNem1.NW_012011000v1 8343195 1 + 10161646 T i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1373720 1 + 3144229 T i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96652291 1 + 98384682 T i chlSab2.chr13 C 0 T 96 s manLeu1.NW_012106474v1 8197059 1 - 10857215 T i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169860838 1 + 171630274 T i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1274364 1 - 2905041 T i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1230976 1 - 2164891 T i cebCap1.NW_016107695v1 C 0 C 0 e otoGar3.GL873575 10934224 794 - 12073884 I e aotNan1.NW_018494782v1 1484813 95 - 1813869 T e dasNov3.JH569188 539847 461 + 760995 I e colAng1.NW_012114488v1 15591273 0 - 23502949 C e canFam3.chr1 56157105 382 + 122678785 I e nomLeu3.chr3 156284480 46 + 157873769 T e rheMac8.chr4 170310733 72 + 172585720 T e gorGor5.CYUI01015032v1 11457179 64 - 12463322 T e macFas5.chr4 169056571 72 - 170955103 T a score=5625.000000 s hg38.chr6_KB021644v2_alt 84514 2 + 185823 TG s panTro5.chr6 173536540 2 + 175400573 TG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171775310 2 + 173848474 TG i panPan2.chr6 C 0 C 0 s rheMac8.chr4 170310661 2 + 172585720 CG i rheMac8.chr4 T 72 C 0 s macFas5.chr4 169056499 2 - 170955103 CG i macFas5.chr4 T 72 C 0 s macNem1.NW_012011000v1 8343196 2 + 10161646 CG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1373721 2 + 3144229 CG i cerAty1.NW_012002071v1 C 0 C 0 s manLeu1.NW_012106474v1 8197060 2 - 10857215 CA i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169860839 2 + 171630274 TG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1274365 2 - 2905041 TG i saiBol1.JH378287 C 0 T 119 s cebCap1.NW_016107695v1 1230977 2 - 2164891 TG i cebCap1.NW_016107695v1 C 0 C 0 e otoGar3.GL873575 10934224 794 - 12073884 I e aotNan1.NW_018494782v1 1484813 95 - 1813869 T e dasNov3.JH569188 539847 461 + 760995 I e colAng1.NW_012114488v1 15591273 0 - 23502949 C e canFam3.chr1 56157105 382 + 122678785 I e chlSab2.chr13 96652292 96 + 98384682 T e nomLeu3.chr3 156284480 46 + 157873769 T e gorGor5.CYUI01015032v1 11457179 64 - 12463322 T a score=91161.000000 s hg38.chr6_KB021644v2_alt 84516 25 + 185823 TGGGAAGAGGTGGCACGGACCTTGT s panTro5.chr6 173536542 25 + 175400573 TGGGCAGAGGTGGCACGGGCCTTGT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171775312 25 + 173848474 TGGGCAGAGGTGGCACGGACCTTGT i panPan2.chr6 C 0 C 0 s rheMac8.chr4 170310663 25 + 172585720 TGGGCAGAGGTGGCATAGGCCTTGT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169056501 25 - 170955103 TGGGCAGAGGTGGCATAGGCCTTGT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8343198 25 + 10161646 TGGGTAGAGGTGGCATAGGCCTTGT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1373723 25 + 3144229 TGGGCAGAGGTGGCACAGGCCTTGT i cerAty1.NW_012002071v1 C 0 C 0 s manLeu1.NW_012106474v1 8197062 25 - 10857215 TTGGCAGAGGTGGCACAGGCCTCGT i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169860841 25 + 171630274 TGGGCAGAGGAGGCATGGGCCTTGT i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1230979 25 - 2164891 TGGGCAGAGGAGGCACGGGCCTTGT i cebCap1.NW_016107695v1 C 0 C 0 e otoGar3.GL873575 10934224 794 - 12073884 I e saiBol1.JH378287 1274367 119 - 2905041 T e aotNan1.NW_018494782v1 1484813 95 - 1813869 T e dasNov3.JH569188 539847 461 + 760995 I e colAng1.NW_012114488v1 15591273 0 - 23502949 C e canFam3.chr1 56157105 382 + 122678785 I e chlSab2.chr13 96652292 96 + 98384682 T e nomLeu3.chr3 156284480 46 + 157873769 T e gorGor5.CYUI01015032v1 11457179 64 - 12463322 T a score=66540.000000 s hg38.chr6_KB021644v2_alt 84541 15 + 185823 GGGAAGAGGTGGCAT s panTro5.chr6 173536567 15 + 175400573 GGGCAGAGGTGGCAT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171775337 15 + 173848474 GGGCAGAGGTGGCAT i panPan2.chr6 C 0 C 0 s rheMac8.chr4 170310688 15 + 172585720 GAGTAGAGGTGGCAT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169056526 15 - 170955103 GAGTAGAGGTGGCAT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8343223 15 + 10161646 GAGTAGAGGTGGCAT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1373748 15 + 3144229 GGGCAGAGGTGGCAT i cerAty1.NW_012002071v1 C 0 C 0 s manLeu1.NW_012106474v1 8197087 15 - 10857215 GGGCAGAGGTGGCAT i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169860866 15 + 171630274 GGGCAGAGGTGGCAT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1274248 15 - 2905041 GGGCAGAGGAGGCAC i saiBol1.JH378287 T 119 C 0 s cebCap1.NW_016107695v1 1231004 15 - 2164891 GGGCAGAGGTGGCAA i cebCap1.NW_016107695v1 C 0 T 120 e otoGar3.GL873575 10934224 794 - 12073884 I e aotNan1.NW_018494782v1 1484813 95 - 1813869 T e dasNov3.JH569188 539847 461 + 760995 I e colAng1.NW_012114488v1 15591273 0 - 23502949 C e canFam3.chr1 56157105 382 + 122678785 I e chlSab2.chr13 96652292 96 + 98384682 T e nomLeu3.chr3 156284480 46 + 157873769 T e gorGor5.CYUI01015032v1 11457179 64 - 12463322 T a score=34001.000000 s hg38.chr6_KB021644v2_alt 84556 6 + 185823 GGACCT s panTro5.chr6 173536582 6 + 175400573 GGACCT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171775352 6 + 173848474 GGGCCT i panPan2.chr6 C 0 T 119 s rheMac8.chr4 170310703 6 + 172585720 GGGCCT i rheMac8.chr4 C 0 T 96 s macFas5.chr4 169056541 6 - 170955103 GGGCCT i macFas5.chr4 C 0 T 96 s macNem1.NW_012011000v1 8343238 6 + 10161646 GGGCCT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1373763 6 + 3144229 GGGCCT i cerAty1.NW_012002071v1 C 0 C 0 s manLeu1.NW_012106474v1 8197102 6 - 10857215 GGGCCT i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169860881 6 + 171630274 AGACCT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1274263 6 - 2905041 GGGCCT i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1230899 6 - 2164891 GGGCCT i cebCap1.NW_016107695v1 T 120 C 0 s aotNan1.NW_018494782v1 1484718 6 - 1813869 GGGCCT i aotNan1.NW_018494782v1 T 95 C 0 e otoGar3.GL873575 10934224 794 - 12073884 I e dasNov3.JH569188 539847 461 + 760995 I e colAng1.NW_012114488v1 15591273 0 - 23502949 C e canFam3.chr1 56157105 382 + 122678785 I e chlSab2.chr13 96652292 96 + 98384682 T e nomLeu3.chr3 156284480 46 + 157873769 T e gorGor5.CYUI01015032v1 11457179 64 - 12463322 T a score=1107.000000 s hg38.chr6_KB021644v2_alt 84562 1 + 185823 T s panTro5.chr6 173536588 1 + 175400573 T i panTro5.chr6 C 0 T 72 s macNem1.NW_012011000v1 8343244 1 + 10161646 C i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1373769 1 + 3144229 C i cerAty1.NW_012002071v1 C 0 C 0 s manLeu1.NW_012106474v1 8197108 1 - 10857215 C i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169860887 1 + 171630274 T i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1274269 1 - 2905041 T i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1230905 1 - 2164891 T i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1484724 1 - 1813869 T i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10934224 794 - 12073884 I e dasNov3.JH569188 539847 461 + 760995 I e colAng1.NW_012114488v1 15591273 0 - 23502949 C e canFam3.chr1 56157105 382 + 122678785 I e chlSab2.chr13 96652292 96 + 98384682 T e nomLeu3.chr3 156284480 46 + 157873769 T e rheMac8.chr4 170310709 96 + 172585720 T e gorGor5.CYUI01015032v1 11457179 64 - 12463322 T e macFas5.chr4 169056547 96 - 170955103 T e panPan2.chr6 171775358 119 + 173848474 T a score=17167.000000 s hg38.chr6_KB021644v2_alt 84563 6 + 185823 GTGGGA s panTro5.chr6 173536517 6 + 175400573 GTGGGC i panTro5.chr6 T 72 C 0 s panPan2.chr6 171775239 6 + 173848474 GTGGGC i panPan2.chr6 T 119 C 0 s macNem1.NW_012011000v1 8343245 6 + 10161646 GTGGGC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1373770 6 + 3144229 GTGGGC i cerAty1.NW_012002071v1 C 0 C 0 s manLeu1.NW_012106474v1 8197109 6 - 10857215 ATGGGC i manLeu1.NW_012106474v1 C 0 T 96 s calJac3.chr4 169860888 6 + 171630274 GTGGGC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1274270 6 - 2905041 GGGGGA i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1230906 6 - 2164891 GTGGGC i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1484725 6 - 1813869 CTGGGA i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10934224 794 - 12073884 I e dasNov3.JH569188 539847 461 + 760995 I e colAng1.NW_012114488v1 15591273 0 - 23502949 C e canFam3.chr1 56157105 382 + 122678785 I e chlSab2.chr13 96652292 96 + 98384682 T e nomLeu3.chr3 156284480 46 + 157873769 T e rheMac8.chr4 170310709 96 + 172585720 T e gorGor5.CYUI01015032v1 11457179 64 - 12463322 T e macFas5.chr4 169056547 96 - 170955103 T a score=4095.000000 s hg38.chr6_KB021644v2_alt 84569 1 + 185823 A s panTro5.chr6 173536523 1 + 175400573 A i panTro5.chr6 C 0 C 0 s panPan2.chr6 171775245 1 + 173848474 A i panPan2.chr6 C 0 C 0 s macNem1.NW_012011000v1 8343251 1 + 10161646 A i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1373776 1 + 3144229 A i cerAty1.NW_012002071v1 C 0 C 0 s manLeu1.NW_012106474v1 8197019 1 - 10857215 A i manLeu1.NW_012106474v1 T 96 C 0 s calJac3.chr4 169860894 1 + 171630274 A i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1274276 1 - 2905041 A i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1230912 1 - 2164891 A i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1484731 1 - 1813869 A i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10934224 794 - 12073884 I e dasNov3.JH569188 539847 461 + 760995 I e colAng1.NW_012114488v1 15591273 0 - 23502949 C e canFam3.chr1 56157105 382 + 122678785 I e chlSab2.chr13 96652292 96 + 98384682 T e nomLeu3.chr3 156284480 46 + 157873769 T e rheMac8.chr4 170310709 96 + 172585720 T e gorGor5.CYUI01015032v1 11457179 64 - 12463322 T e macFas5.chr4 169056547 96 - 170955103 T a score=47698.000000 s hg38.chr6_KB021644v2_alt 84570 10 + 185823 GAGGTGGCAC s panTro5.chr6 173536524 10 + 175400573 GAGGTGGCAC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171775246 10 + 173848474 GAGGTGGCAC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11457115 10 - 12463322 GAGGTGGCAT i gorGor5.CYUI01015032v1 T 64 C 0 s macNem1.NW_012011000v1 8343252 10 + 10161646 GAGGTGGCAC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1373777 10 + 3144229 GAGGTGACAT i cerAty1.NW_012002071v1 C 0 T 24 s manLeu1.NW_012106474v1 8197020 10 - 10857215 GAGGTGGCAC i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169860895 10 + 171630274 GAGGTGGCAC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1274277 10 - 2905041 GAGGTGGCAC i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1230913 10 - 2164891 GAGGAGGCAC i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1484732 10 - 1813869 GAGGTGGCAC i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10934224 794 - 12073884 I e dasNov3.JH569188 539847 461 + 760995 I e colAng1.NW_012114488v1 15591273 0 - 23502949 C e canFam3.chr1 56157105 382 + 122678785 I e chlSab2.chr13 96652292 96 + 98384682 T e nomLeu3.chr3 156284480 46 + 157873769 T e rheMac8.chr4 170310709 96 + 172585720 T e macFas5.chr4 169056547 96 - 170955103 T a score=23681.000000 s hg38.chr6_KB021644v2_alt 84580 6 + 185823 GGGCCT s panTro5.chr6 173536534 6 + 175400573 GGGCCT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171775256 6 + 173848474 GGGCCT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11457125 6 - 12463322 GGGCCT i gorGor5.CYUI01015032v1 C 0 C 0 s macNem1.NW_012011000v1 8343262 6 + 10161646 GGGCCT i macNem1.NW_012011000v1 C 0 T 120 s cerAty1.NW_012002071v1 1373763 6 + 3144229 GGGCCT i cerAty1.NW_012002071v1 T 24 C 0 s manLeu1.NW_012106474v1 8197030 6 - 10857215 AGGCCT i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169860905 6 + 171630274 TGGTCT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1274287 6 - 2905041 ATGCCT i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1230923 6 - 2164891 AGGCCT i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1484742 6 - 1813869 AGGCCT i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10934224 794 - 12073884 I e dasNov3.JH569188 539847 461 + 760995 I e colAng1.NW_012114488v1 15591273 0 - 23502949 C e canFam3.chr1 56157105 382 + 122678785 I e chlSab2.chr13 96652292 96 + 98384682 T e nomLeu3.chr3 156284480 46 + 157873769 T e rheMac8.chr4 170310709 96 + 172585720 T e macFas5.chr4 169056547 96 - 170955103 T a score=2997.000000 s hg38.chr6_KB021644v2_alt 84586 1 + 185823 T s panTro5.chr6 173536540 1 + 175400573 T i panTro5.chr6 C 0 C 0 s panPan2.chr6 171775262 1 + 173848474 T i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11457131 1 - 12463322 T i gorGor5.CYUI01015032v1 C 0 C 0 s cerAty1.NW_012002071v1 1373769 1 + 3144229 C i cerAty1.NW_012002071v1 C 0 C 0 s manLeu1.NW_012106474v1 8197036 1 - 10857215 T i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169860911 1 + 171630274 T i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1274293 1 - 2905041 T i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1230929 1 - 2164891 T i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1484748 1 - 1813869 T i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10934224 794 - 12073884 I e dasNov3.JH569188 539847 461 + 760995 I e colAng1.NW_012114488v1 15591273 0 - 23502949 C e canFam3.chr1 56157105 382 + 122678785 I e chlSab2.chr13 96652292 96 + 98384682 T e nomLeu3.chr3 156284480 46 + 157873769 T e macNem1.NW_012011000v1 8343268 120 + 10161646 T e rheMac8.chr4 170310709 96 + 172585720 T e macFas5.chr4 169056547 96 - 170955103 T a score=10505.000000 s hg38.chr6_KB021644v2_alt 84587 2 + 185823 GT s panTro5.chr6 173536541 2 + 175400573 GT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171775263 2 + 173848474 GT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11457132 2 - 12463322 GT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156284434 2 + 157873769 GT i nomLeu3.chr3 T 46 C 0 s cerAty1.NW_012002071v1 1373770 2 + 3144229 GT i cerAty1.NW_012002071v1 C 0 C 0 s manLeu1.NW_012106474v1 8197037 2 - 10857215 GT i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169860912 2 + 171630274 GT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1274294 2 - 2905041 GT i saiBol1.JH378287 C 0 T 48 s cebCap1.NW_016107695v1 1230930 2 - 2164891 GT i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1484749 2 - 1813869 GT i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10934224 794 - 12073884 I e dasNov3.JH569188 539847 461 + 760995 I e colAng1.NW_012114488v1 15591273 0 - 23502949 C e canFam3.chr1 56157105 382 + 122678785 I e chlSab2.chr13 96652292 96 + 98384682 T e macNem1.NW_012011000v1 8343268 120 + 10161646 T e rheMac8.chr4 170310709 96 + 172585720 T e macFas5.chr4 169056547 96 - 170955103 T a score=93250.000000 s hg38.chr6_KB021644v2_alt 84589 21 + 185823 GGGCAGAGGTGGCACGGACCT s panTro5.chr6 173536543 21 + 175400573 GGGCAGAGGTGGCACGGGCCT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171775265 21 + 173848474 GGGCAGAGGTGGCACGGGCCT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11457134 21 - 12463322 GGGCAGAGGTGGCACGGGCCT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156284436 21 + 157873769 GGGCAGAGGTGGCATGAGCCT i nomLeu3.chr3 C 0 C 0 s cerAty1.NW_012002071v1 1373772 21 + 3144229 GGGCAGAGGTGACATGAGCCT i cerAty1.NW_012002071v1 C 0 C 0 s manLeu1.NW_012106474v1 8197039 21 - 10857215 GGGCAGAGGTGGCATGGGCCT i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169860914 21 + 171630274 GGGCAGAGGTGGTACTGGTCT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1274248 21 - 2905041 GGGCAGAGGAGGCACGGGCCT i saiBol1.JH378287 T 48 C 0 s cebCap1.NW_016107695v1 1230932 21 - 2164891 GGGCAGAGGAGGCACTGGCCT i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1484751 21 - 1813869 GGGCAGAGGAGGCACGGGCCT i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10934224 794 - 12073884 I e dasNov3.JH569188 539847 461 + 760995 I e colAng1.NW_012114488v1 15591273 0 - 23502949 C e canFam3.chr1 56157105 382 + 122678785 I e chlSab2.chr13 96652292 96 + 98384682 T e macNem1.NW_012011000v1 8343268 120 + 10161646 T e rheMac8.chr4 170310709 96 + 172585720 T e macFas5.chr4 169056547 96 - 170955103 T a score=6392.000000 s hg38.chr6_KB021644v2_alt 84610 1 + 185823 T s panTro5.chr6 173536564 1 + 175400573 T i panTro5.chr6 C 0 C 0 s panPan2.chr6 171775286 1 + 173848474 T i panPan2.chr6 C 0 T 48 s gorGor5.CYUI01015032v1 11457155 1 - 12463322 T i gorGor5.CYUI01015032v1 C 0 T 48 s nomLeu3.chr3 156284457 1 + 157873769 T i nomLeu3.chr3 C 0 T 24 s rheMac8.chr4 170310613 1 + 172585720 T i rheMac8.chr4 T 96 C 0 s macFas5.chr4 169056451 1 - 170955103 T i macFas5.chr4 T 96 C 0 s macNem1.NW_012011000v1 8343148 1 + 10161646 T i macNem1.NW_012011000v1 T 120 C 0 s cerAty1.NW_012002071v1 1373793 1 + 3144229 C i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96652196 1 + 98384682 T i chlSab2.chr13 T 96 C 0 s manLeu1.NW_012106474v1 8197060 1 - 10857215 C i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169860935 1 + 171630274 T i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1274269 1 - 2905041 T i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1230953 1 - 2164891 T i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1484772 1 - 1813869 T i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10934224 794 - 12073884 I e dasNov3.JH569188 539847 461 + 760995 I e colAng1.NW_012114488v1 15591273 0 - 23502949 C e canFam3.chr1 56157105 382 + 122678785 I a score=149285.000000 s hg38.chr6_KB021644v2_alt 84611 17 + 185823 GTGGGCAGAGGTGGCAC s panTro5.chr6 173536565 17 + 175400573 GTGGGCAGAGGTGGCAT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171775239 17 + 173848474 GTGGGCAGAGGTGGCAC i panPan2.chr6 T 48 C 0 s gorGor5.CYUI01015032v1 11457108 17 - 12463322 GTGGGCTGAGGTGGCAT i gorGor5.CYUI01015032v1 T 48 C 0 s nomLeu3.chr3 156284434 17 + 157873769 GTGGGCAGAGGTGGCAT i nomLeu3.chr3 T 24 C 0 s rheMac8.chr4 170310614 17 + 172585720 GTGGGCAGAGGTGGCAC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169056452 17 - 170955103 GTGGGCAGAGGTGGCAC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8343149 17 + 10161646 GTGGGCAGAGGTGGCAC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1373794 17 + 3144229 ATTGGCAGAGGTGGCAC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96652197 17 + 98384682 GTGGGCAGAGGTGGCAT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8197061 17 - 10857215 ATTGGCAGAGGTGGCAC i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169860936 17 + 171630274 GTGGGCAGAGGTGGCAT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1274270 17 - 2905041 GGGGGAAGAGGTGGCAC i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1230954 17 - 2164891 GTGGGCAGAGGTGGCAC i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1484773 17 - 1813869 GTGGGCAGAGGTGGCAC i aotNan1.NW_018494782v1 C 0 I 23 e otoGar3.GL873575 10934224 794 - 12073884 I e dasNov3.JH569188 539847 461 + 760995 I e colAng1.NW_012114488v1 15591273 0 - 23502949 C e canFam3.chr1 56157105 382 + 122678785 I a score=241274.000000 s hg38.chr6_KB021644v2_alt 84628 29 + 185823 GGGCCTTGTGGGCAGAGGTGGCACGGACC s panTro5.chr6 173536582 29 + 175400573 GGACCTTGTGGGCAGAGGTGGCACGGGCC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171775256 29 + 173848474 GGGCCTTGTGGGCAGAGGTGGCACGGGCC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11457125 29 - 12463322 GGGCCTTGTGGGCAGAGGTGGCACGGGCC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156284451 29 + 157873769 GAGCCTTGTGGGCAGAGGTGGCACGGGCC i nomLeu3.chr3 C 0 T 46 s rheMac8.chr4 170310631 29 + 172585720 GGGTCTTGTGGGCAAAGGTGGCTCGGGCC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169056469 29 - 170955103 GGGCCTTGTGGGCAAAGGTGGCTCGGGCC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8343166 29 + 10161646 GGGCCTTGTGGGCAAAGGTGGCTCGGGCC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1373811 29 + 3144229 AGGCCTTGTGGGCAGAGGTGGCATGGGCC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96652214 29 + 98384682 GGGCCTTGTGGGCAGAGGTGGCACGGGCC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8197078 29 - 10857215 AGGCCTCGTGGGCAGAGGTGGCATGGGCC i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169860953 29 + 171630274 AGGCCTTGTGGGCAGAGGTGGCACTGGTC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1274287 29 - 2905041 ATGCCTTGTGGGCAGAGGTGGCACATGCC i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1230971 29 - 2164891 GGGCCTTGTGGGCAGAGGAGGCACGGGCC i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1484813 29 - 1813869 GGGCCTTCTGGGAAGAGGTGGCACAGGAC i aotNan1.NW_018494782v1 I 23 C 0 e otoGar3.GL873575 10934224 794 - 12073884 I e dasNov3.JH569188 539847 461 + 760995 I e colAng1.NW_012114488v1 15591273 0 - 23502949 C e canFam3.chr1 56157105 382 + 122678785 I a score=8281.000000 s hg38.chr6_KB021644v2_alt 84657 1 + 185823 T s panTro5.chr6 173536611 1 + 175400573 T i panTro5.chr6 C 0 C 0 s panPan2.chr6 171775285 1 + 173848474 T i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11457154 1 - 12463322 T i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170310660 1 + 172585720 T i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169056498 1 - 170955103 T i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8343195 1 + 10161646 T i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1373840 1 + 3144229 T i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96652243 1 + 98384682 T i chlSab2.chr13 C 0 T 48 s manLeu1.NW_012106474v1 8197107 1 - 10857215 T i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169860982 1 + 171630274 T i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1274316 1 - 2905041 T i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1231000 1 - 2164891 T i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1484842 1 - 1813869 T i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10934224 794 - 12073884 I e dasNov3.JH569188 539847 461 + 760995 I e colAng1.NW_012114488v1 15591273 0 - 23502949 C e canFam3.chr1 56157105 382 + 122678785 I e nomLeu3.chr3 156284480 46 + 157873769 T a score=2881.000000 s hg38.chr6_KB021644v2_alt 84658 1 + 185823 T s panTro5.chr6 173536612 1 + 175400573 T i panTro5.chr6 C 0 C 0 s panPan2.chr6 171775286 1 + 173848474 T i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11457155 1 - 12463322 T i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170310661 1 + 172585720 C i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169056499 1 - 170955103 C i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8343196 1 + 10161646 C i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1373841 1 + 3144229 C i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96652196 1 + 98384682 T i chlSab2.chr13 T 48 C 0 s manLeu1.NW_012106474v1 8197108 1 - 10857215 C i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169860983 1 + 171630274 T i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1274317 1 - 2905041 T i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1231001 1 - 2164891 T i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1484843 1 - 1813869 T i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10934224 794 - 12073884 I e dasNov3.JH569188 539847 461 + 760995 I e colAng1.NW_012114488v1 15591273 0 - 23502949 C e canFam3.chr1 56157105 382 + 122678785 I e nomLeu3.chr3 156284480 46 + 157873769 T a score=16640.000000 s hg38.chr6_KB021644v2_alt 84659 2 + 185823 GT s panTro5.chr6 173536613 2 + 175400573 GT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171775287 2 + 173848474 GT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11457156 2 - 12463322 GT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156284434 2 + 157873769 GT i nomLeu3.chr3 T 46 C 0 s rheMac8.chr4 170310662 2 + 172585720 GT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169056500 2 - 170955103 GT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8343197 2 + 10161646 GT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1373842 2 + 3144229 AT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96652197 2 + 98384682 GT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8197109 2 - 10857215 AT i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169860984 2 + 171630274 GT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1274318 2 - 2905041 GT i saiBol1.JH378287 C 0 T 72 s cebCap1.NW_016107695v1 1231002 2 - 2164891 GT i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1484844 2 - 1813869 GT i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10934224 794 - 12073884 I e dasNov3.JH569188 539847 461 + 760995 I e colAng1.NW_012114488v1 15591273 0 - 23502949 C e canFam3.chr1 56157105 382 + 122678785 I a score=185662.000000 s hg38.chr6_KB021644v2_alt 84661 21 + 185823 GGGCAGAGGTGGCATGGGCCT s panTro5.chr6 173536615 21 + 175400573 GGGCAGAGGTGGCATGGGCCT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171775289 21 + 173848474 GGGCAGAGGTGGCATGGACCT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11457158 21 - 12463322 GGGCAGAGGTGGCATGGGCCT i gorGor5.CYUI01015032v1 C 0 T 71 s nomLeu3.chr3 156284436 21 + 157873769 GGGCAGAGGTGGCATGAGCCT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170310664 21 + 172585720 GGGCAGAGGTGGCATAGGCCT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169056502 21 - 170955103 GGGCAGAGGTGGCATAGGCCT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8343199 21 + 10161646 GGGTAGAGGTGGCATAGGCCT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1373844 21 + 3144229 GGGCAGAGGTGGCGTGGGCCT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96652199 21 + 98384682 GGGCAGAGGTGGCATGGGCCT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8197111 21 - 10857215 GGGCAGAGGTGGCATGGGCCT i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169860986 21 + 171630274 GGGCAGAGGTGGTACTGGTCT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1274248 21 - 2905041 GGGCAGAGGAGGCACGGGCCT i saiBol1.JH378287 T 72 C 0 s cebCap1.NW_016107695v1 1231004 21 - 2164891 GGGCAGAGGTGGCAAGGGCCT i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1484846 21 - 1813869 GGGCAGAGGTGGCACAGGCCT i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10934224 794 - 12073884 I e dasNov3.JH569188 539847 461 + 760995 I e colAng1.NW_012114488v1 15591273 0 - 23502949 C e canFam3.chr1 56157105 382 + 122678785 I a score=156489.000000 s hg38.chr6_KB021644v2_alt 84682 22 + 185823 TGTGGGCAGAGGTGGCACGGAC s panTro5.chr6 173536636 22 + 175400573 TGTGGGCAGAGGTGGCATGGAC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171775310 22 + 173848474 TGTGGGCAGAGGTGGCACGGAC i panPan2.chr6 C 0 C 0 s nomLeu3.chr3 156284457 22 + 157873769 TGTGGGCAGAGGTGGCACGGGC i nomLeu3.chr3 C 0 T 45 s rheMac8.chr4 170310685 22 + 172585720 TGTGAGTAGAGGTGGCATGGGC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169056523 22 - 170955103 TGTGAGTAGAGGTGGCATGGGC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8343220 22 + 10161646 TGTGAGTAGAGGTGGCATGGGC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1373865 22 + 3144229 CGTGGGCAGAGGTGGCATGGGC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96652220 22 + 98384682 TGTGGGCAGAGGTGGCACGGGC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8197132 22 - 10857215 CGTGGGCAGAGGTGGCACGGGT i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169861007 22 + 171630274 TGTGGGCAGAGGAGGCATGGGC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1274269 22 - 2905041 TGGGGGAAGAGGTGGCACATGC i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1231025 22 - 2164891 TGTGGGCAGAGGTGGCACGGGC i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1484867 22 - 1813869 TGTGGGCAGAGGAGGCACGGGC i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10934224 794 - 12073884 I e dasNov3.JH569188 539847 461 + 760995 I e colAng1.NW_012114488v1 15591273 0 - 23502949 C e canFam3.chr1 56157105 382 + 122678785 I e gorGor5.CYUI01015032v1 11457179 71 - 12463322 T a score=4909.000000 s hg38.chr6_KB021644v2_alt 84704 1 + 185823 T s panTro5.chr6 173536658 1 + 175400573 C i panTro5.chr6 C 0 T 24 s panPan2.chr6 171775332 1 + 173848474 C i panPan2.chr6 C 0 C 0 s rheMac8.chr4 170310707 1 + 172585720 C i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169056545 1 - 170955103 C i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8343242 1 + 10161646 C i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1373887 1 + 3144229 C i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96652242 1 + 98384682 C i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8197154 1 - 10857215 C i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169861029 1 + 171630274 C i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1274291 1 - 2905041 C i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1231047 1 - 2164891 C i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1484889 1 - 1813869 T i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10934224 794 - 12073884 I e dasNov3.JH569188 539847 461 + 760995 I e colAng1.NW_012114488v1 15591273 0 - 23502949 C e canFam3.chr1 56157105 382 + 122678785 I e nomLeu3.chr3 156284479 45 + 157873769 T e gorGor5.CYUI01015032v1 11457179 71 - 12463322 T a score=9406.000000 s hg38.chr6_KB021644v2_alt 84705 2 + 185823 TT s panTro5.chr6 173536635 2 + 175400573 TT i panTro5.chr6 T 24 C 0 s panPan2.chr6 171775333 2 + 173848474 TT i panPan2.chr6 C 0 C 0 s rheMac8.chr4 170310708 2 + 172585720 TC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169056546 2 - 170955103 TC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8343243 2 + 10161646 TC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1373888 2 + 3144229 TC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96652243 2 + 98384682 TT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8197155 2 - 10857215 TC i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169861030 2 + 171630274 TT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1274292 2 - 2905041 TT i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1231048 2 - 2164891 TT i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1484890 2 - 1813869 TT i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10934224 794 - 12073884 I e dasNov3.JH569188 539847 461 + 760995 I e colAng1.NW_012114488v1 15591273 0 - 23502949 C e canFam3.chr1 56157105 382 + 122678785 I e nomLeu3.chr3 156284479 45 + 157873769 T e gorGor5.CYUI01015032v1 11457179 71 - 12463322 T a score=154591.000000 s hg38.chr6_KB021644v2_alt 84707 17 + 185823 GTGGGCAGAGGTGGCAC s panTro5.chr6 173536637 17 + 175400573 GTGGGCAGAGGTGGCAT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171775335 17 + 173848474 GTGGGCAGAGGTGGCAT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11457108 17 - 12463322 GTGGGCTGAGGTGGCAT i gorGor5.CYUI01015032v1 T 71 C 0 s nomLeu3.chr3 156284434 17 + 157873769 GTGGGCAGAGGTGGCAT i nomLeu3.chr3 T 45 C 0 s rheMac8.chr4 170310710 17 + 172585720 GTGGGCAGAGGTGGCAC i rheMac8.chr4 C 0 T 48 s macFas5.chr4 169056548 17 - 170955103 GTGGGCAGAGGTGGCAC i macFas5.chr4 C 0 T 48 s macNem1.NW_012011000v1 8343245 17 + 10161646 GTGGGCAGAGGTGGCAC i macNem1.NW_012011000v1 C 0 T 48 s cerAty1.NW_012002071v1 1373890 17 + 3144229 ATGGGCAGAGGTGGCAC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96652245 17 + 98384682 GTGGGCAGAGGTGGCAT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8197157 17 - 10857215 ATGGGCAGAGGTGGCAC i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169861032 17 + 171630274 GTGGGCAGAGGAGGCAT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1274294 17 - 2905041 GTGGGCAGAGGTGGCAC i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1231050 17 - 2164891 GTGGGCAGAGGAGGCAC i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1484892 17 - 1813869 GTGGGCAGAGGTGGCAC i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10934224 794 - 12073884 I e dasNov3.JH569188 539847 461 + 760995 I e colAng1.NW_012114488v1 15591273 0 - 23502949 C e canFam3.chr1 56157105 382 + 122678785 I a score=15932.000000 s hg38.chr6_KB021644v2_alt 84724 3 + 185823 GGG s panTro5.chr6 173536654 3 + 175400573 GGA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171775352 3 + 173848474 GGG i panPan2.chr6 C 0 T 48 s gorGor5.CYUI01015032v1 11457125 3 - 12463322 GGG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156284451 3 + 157873769 GAG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170310679 3 + 172585720 AGG i rheMac8.chr4 T 48 C 0 s macFas5.chr4 169056517 3 - 170955103 AGG i macFas5.chr4 T 48 C 0 s macNem1.NW_012011000v1 8343214 3 + 10161646 AGG i macNem1.NW_012011000v1 T 48 C 0 s cerAty1.NW_012002071v1 1373907 3 + 3144229 GGG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96652262 3 + 98384682 GGG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8197174 3 - 10857215 GGG i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169861049 3 + 171630274 GGG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1274311 3 - 2905041 ATG i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1231067 3 - 2164891 TGG i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1484909 3 - 1813869 AGG i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10934224 794 - 12073884 I e dasNov3.JH569188 539847 461 + 760995 I e colAng1.NW_012114488v1 15591273 0 - 23502949 C e canFam3.chr1 56157105 382 + 122678785 I a score=165828.000000 s hg38.chr6_KB021644v2_alt 84727 21 + 185823 CCTTGTGGGCAGAGGTGGCAC s panTro5.chr6 173536657 21 + 175400573 CCTTGTGGGCAGAGGTGGCAC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171775307 21 + 173848474 CCTTGTGGGCAGAGGTGGCAC i panPan2.chr6 T 48 C 0 s gorGor5.CYUI01015032v1 11457128 21 - 12463322 CCTTGTGGGCAGAGGTGGCAC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156284454 21 + 157873769 CCTTGTGGGCAGAGGTGGCAC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170310682 21 + 172585720 CCTTGTGAGTAGAGGTGGCAT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169056520 21 - 170955103 CCTTGTGAGTAGAGGTGGCAT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8343217 21 + 10161646 CCTTGTGAGTAGAGGTGGCAT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1373910 21 + 3144229 TCTCATGGGCAGAGGTGGCAC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96652265 21 + 98384682 CCTCATAGGCAGAGGTGGCAC i chlSab2.chr13 C 0 T 24 s manLeu1.NW_012106474v1 8197177 21 - 10857215 TCTCATGGGCAGAGGTGGCAC i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169861052 20 + 171630274 CCTTGTGGGCAGAGGTGGCA- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1274314 21 - 2905041 CCTTGTGGGCAGAGGAGGCAC i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1231070 21 - 2164891 CCTTGTGGGCAGAGGTGGCAT i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1484912 20 - 1813869 CCTTGTGGGCAGAGGAGGCA- i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10934224 794 - 12073884 I e dasNov3.JH569188 539847 461 + 760995 I e colAng1.NW_012114488v1 15591273 0 - 23502949 C e canFam3.chr1 56157105 382 + 122678785 I a score=44342.000000 s hg38.chr6_KB021644v2_alt 84748 5 + 185823 GGGCC s panTro5.chr6 173536678 5 + 175400573 GGGCC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171775328 5 + 173848474 GGACC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11457149 5 - 12463322 GGGCC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156284475 5 + 157873769 GGGCC i nomLeu3.chr3 C 0 T 24 s rheMac8.chr4 170310703 5 + 172585720 GGGCC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169056541 5 - 170955103 GGGCC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8343238 5 + 10161646 GGGCC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1373931 5 + 3144229 GGGTC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96652262 5 + 98384682 GGGCC i chlSab2.chr13 T 24 C 0 s manLeu1.NW_012106474v1 8197198 5 - 10857215 GGATC i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169861072 5 + 171630274 GGGCC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1274335 5 - 2905041 GGGCC i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1231091 5 - 2164891 GGGCC i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1484932 5 - 1813869 GGGTC i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10934224 794 - 12073884 I e dasNov3.JH569188 539847 461 + 760995 I e colAng1.NW_012114488v1 15591273 0 - 23502949 C e canFam3.chr1 56157105 382 + 122678785 I a score=9555.000000 s hg38.chr6_KB021644v2_alt 84753 1 + 185823 T s panTro5.chr6 173536683 1 + 175400573 T i panTro5.chr6 C 0 C 0 s panPan2.chr6 171775333 1 + 173848474 T i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11457154 1 - 12463322 T i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156284456 1 + 157873769 T i nomLeu3.chr3 T 24 C 0 s rheMac8.chr4 170310708 1 + 172585720 T i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169056546 1 - 170955103 T i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8343243 1 + 10161646 T i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1373936 1 + 3144229 T i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96652267 1 + 98384682 T i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8197203 1 - 10857215 T i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169861077 1 + 171630274 T i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1274340 1 - 2905041 T i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1231096 1 - 2164891 T i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1484937 1 - 1813869 T i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10934224 794 - 12073884 I e dasNov3.JH569188 539847 461 + 760995 I e colAng1.NW_012114488v1 15591273 0 - 23502949 C e canFam3.chr1 56157105 382 + 122678785 I a score=76046.000000 s hg38.chr6_KB021644v2_alt 84754 9 + 185823 TGTGGGCAG s panTro5.chr6 173536684 9 + 175400573 TGTGGGCAG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171775334 9 + 173848474 TGTGGGCAG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11457155 9 - 12463322 TGTGGGCAG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156284457 9 + 157873769 TGTGGGCAG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170310709 9 + 172585720 CGTGGGCAG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169056547 9 - 170955103 CGTGGGCAG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8343244 9 + 10161646 CGTGGGCAG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1373937 9 + 3144229 CGTGGGCAG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96652268 9 + 98384682 CATAGGCAG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8197204 9 - 10857215 CGTGGGCAG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15591273 9 - 23502949 TGTGGGCAG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169861078 9 + 171630274 TCTGGGAAG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1274341 9 - 2905041 TGAGGGAAG i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1231097 9 - 2164891 TGTGGGCAG i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1484938 9 - 1813869 TCTGGGAAG i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10934224 794 - 12073884 I e dasNov3.JH569188 539847 461 + 760995 I e canFam3.chr1 56157105 382 + 122678785 I a score=153435.000000 s hg38.chr6_KB021644v2_alt 84763 14 + 185823 AGGTGGCATGGGCC s panTro5.chr6 173536693 14 + 175400573 AGGTGGCATGGGCC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171775343 14 + 173848474 AGGTGGCATGGGCC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11457164 14 - 12463322 AGGTGGCATGGGCC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156284466 14 + 157873769 AGGTGGCACGGGCC i nomLeu3.chr3 C 0 T 2 s rheMac8.chr4 170310718 14 + 172585720 AGGTGGCACGGGCC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169056556 14 - 170955103 AGGTGGCACGGGCC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8343253 14 + 10161646 AGGTGGCACGGGCC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1373946 14 + 3144229 AGGTGGCACGGGCC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96652277 14 + 98384682 AGGTGGCACGGGCC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8197213 14 - 10857215 AGGTGGCACGGGCC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15591282 14 - 23502949 AGGTGGCACGGGCC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169861087 14 + 171630274 AGGTGGCACAGGAC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1274350 14 - 2905041 AGGTGGCACAGGAC i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1231106 14 - 2164891 AGGAGGCATGGGAC i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1484947 14 - 1813869 AGGTGGCACAGGAC i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10935018 14 - 12073884 AGGTGGCACGGGTG i otoGar3.GL873575 I 794 C 0 e dasNov3.JH569188 539847 461 + 760995 I e canFam3.chr1 56157105 382 + 122678785 I a score=865132.000000 s hg38.chr6_KB021644v2_alt 84777 107 + 185823 -TGCCTTCAGGCCCTGGCAAGCCTCACCTGAAGTGCTCACGGCTCTC------------GCGCGCAGACATGGCTTCACCCCCACTG--------TGCACACTGGCGCTGGGCCCTGTAGGACAAT-GA s panTro5.chr6 173536707 107 + 175400573 -TGGCTTCAGGCTCTGGCAAGCTTCACCTGAAGTGCTCGCGGCTCTC------------GCGCGCAGACATGGCTTCACCCCCACTG--------TGCACACTGGCGCTGGGCCCTGTAGGACAAT-GA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171775357 107 + 173848474 -TGGCTTCAGGCTCTGGCAAGCTTCACCTGAAGTGCTCGCGGCTCTC------------GCGCGCAGACATGGCTTCACCCCCACTG--------TGCACACTGGCGCTGGGCCCTGTAGGACAAT-GA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11457178 107 - 12463322 -TGGCTTCAGGCCCTGGCAAGCTTCACCTGAAGTGCTTGCGGCTCTC------------GCGTGCACACATGGCTTCACCCCCACTG--------TGCACACTGGCGCTGGGCCCTGTAGGACAAT-GA i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170310732 107 + 172585720 -TGGCTTCAGGCCCTGGCAAGCTTCGCCTGAAGTGCTCGCGGCTCTG------------GCGTGCAGACGTGGCTTTACCCCCACTG--------TGCACACTGGCACTGGGCCCTGGAGGACAAC-GA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169056570 107 - 170955103 -TGGCTTCAGGCCCTGGCAAGCTTCGCCTGAAGTGCTCGCGGCTCTG------------GCGTGCAGACGTGGCTTTACCCCCACTG--------TGCACACTGGCACTGGGCCCTGGAGGACAAC-GA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8343267 107 + 10161646 -TGGCTTCAGGCCCTGGCAAGCTTCGCCTGAAGTGCTCGCAGCTCTG------------GCGTGCAGACGTGGCTTTACCCCCACTG--------TGCACACTGGCACTGGGCCCTGGAGGACAAC-GA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1373960 107 + 3144229 -TGGCTTCAGGCCCTGGCAAGCTTCGCCTGAAGTGCTCGTGGCTCTG------------GCGTGCAAACATGGCTCCACCCCCACTG--------TACACACTGGCACTGGGCCCTGGGGGACAAC-GA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96652291 107 + 98384682 -TGGCTTTAGGCCCTGGCAAGCTTCGCCTGAAGTGCTCGCGGCTCTG------------GCGTGCAAACATGGCTTCACCCCCACTG--------TACACACTGGCACTGGGCCCTGGGGGACAAC-GA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8197227 107 - 10857215 -TGGCTTCAGGCCCTGGCAAGCTTCGCCTGAAGTGCTCGCGGCTCTG------------GTGTGCAAACATGGCTTCACCCCCACTG--------TACACACTGGCACTGGGCCCTGGGGGACAAC-GA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15591296 107 - 23502949 -TGGCTTCAGGACCTGGCAAGCTTCGCCTGAAGTCCTCACGGCTCTG------------GTGTGCAAACGTGGCTTCACCCCCACTG--------TGCACCCTGGCACTGGGCCCTGGAGGACAAC-GA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169861101 115 + 171630274 -TTGCTTCAGGCCCTGCCACGCTTCACCTGAAGTGCTCTCAGCTCTG------------GCGCACTGACGTGGCTTCGCCCCAACTGTGCACACTTGCACACTGGCGCTGGGCTCTGGAGGACAGT-GA i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1274364 115 - 2905041 -TTGCTTCAGGCCCTGCCAAGCTTCACCTGAAGTGCTCTCAGCTCTG------------GCGCACTGACGTGGCTTCACCCCAACTGTGCACACTTGCACACTGGCACTGGGCTCTGAAGGACAGT-GA i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1231120 115 - 2164891 -TTGCTTCGAGCCCTGCCAAGCTTCACCTGAAGTGCTCTCAGCTCTG------------GTGCACTGATGTGGCTTCACCCCAACTGTGCACACTTGCACACTGGCGCTGGGCTCTGGAGGACAGT-GA i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1484961 115 - 1813869 -TTGCTTCAGGCCCTGCCAAGCTTCACCTGAAGTGCTCTCAGCTCTG------------GCGCACTAATGTGCCTTCACCCCAACGGTGCACACTTGCACACTGGCGCTGGGCTCTGGAGGACGGT-GA i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10935032 117 - 12073884 TGGGACCTGGGCCTTGCTCATCCTCACCAGA----CTCCAGGCTCCACCCAGGTCCCCCCCAGACTAACATGCTTCCAGACCAGTTA--------TCCATAATAGCAGCAGGGGCTTGAGAACACTGGA i otoGar3.GL873575 C 0 C 0 e dasNov3.JH569188 539847 461 + 760995 I e canFam3.chr1 56157105 382 + 122678785 I e nomLeu3.chr3 156284480 2 + 157873769 T a score=131292.000000 s hg38.chr6_KB021644v2_alt 84884 14 + 185823 GGCCACCGGCCTGA s panTro5.chr6 173536814 14 + 175400573 GGCCACCGGCCTGA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171775464 14 + 173848474 GGCCACCGGCCTGA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11457285 14 - 12463322 GGCCACCGGCCTGA i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170310839 14 + 172585720 GGCCACCGGCCTGA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169056677 14 - 170955103 GGCCACCGGCCTGA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8343374 14 + 10161646 GGCCACCGGCCTGA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1374067 14 + 3144229 GGCCACCGGCCTGA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96652398 14 + 98384682 GGCCACCGGCCTGA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8197334 14 - 10857215 GGCCACCGGCCTGA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15591403 14 - 23502949 GGCCACCGGCCTGA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169861216 11 + 171630274 GG---CCCGCCGGA i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1274479 14 - 2905041 GGCCACCAGCCTGA i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1231235 14 - 2164891 GGGCACCAGCCTAA i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1485076 14 - 1813869 GGCCACCAGCCTGA i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10935149 12 - 12073884 GGCCACTGTCCT-- i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56157487 14 + 122678785 GGCTGCCAGCCGGG i canFam3.chr1 I 382 C 0 e dasNov3.JH569188 539847 461 + 760995 I e nomLeu3.chr3 156284480 2 + 157873769 T a score=192425.000000 s hg38.chr6_KB021644v2_alt 84898 24 + 185823 GCTTCCC---CACTGTC--CCCA----CCTTGG s panTro5.chr6 173536828 24 + 175400573 GCTTCCC---CACTGTC--CCCA----CCTTGG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171775478 24 + 173848474 GCTTCCC---CACTGTC--CCCA----CCTTGG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11457299 24 - 12463322 GCTTCCC---CACTGTC--CACA----CCTTGG i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170310853 24 + 172585720 GCTTCCC---CACTGTC--CCCA----CCTTGG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169056691 24 - 170955103 GCTTCCC---CACTGTC--CCCA----CCTTGG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8343388 24 + 10161646 GCTTCCC---CACTGTC--CCCA----CCTTGG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1374081 24 + 3144229 GCTTCCC---CGCTGTC--CCCA----CCTTGG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96652412 24 + 98384682 GCTTCCC---CGCTGTC--CCCA----CCTTGG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8197348 24 - 10857215 GCTTCCC---TGCTGTC--CCCA----CCTTGG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15591417 24 - 23502949 GCTTCCC---CGCTGTC--CCCA----CCTTGG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169861227 23 + 171630274 GCTTCCC---CGCTGTT--CCTG----CCAT-G i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1274493 24 - 2905041 GCTTCCC---CGCTGTT--ACCT----CCTTGG i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1231249 24 - 2164891 GCTTCCC---CACTGTT--CCTG----CCTTGG i cebCap1.NW_016107695v1 C 0 I 9 s aotNan1.NW_018494782v1 1485090 24 - 1813869 GCTTCCC---CGCTGTT--CCCG----CCTTGG i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10935161 9 - 12073884 --------------------CCA----GCCTGA i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56157501 31 + 122678785 GCATCCAGCGCTCTGCT--CCCTGGGCCCCCGG i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 540308 26 + 760995 GCTTCCT---CACTCTCAACCTT----CTTTCA i dasNov3.JH569188 I 461 C 0 e nomLeu3.chr3 156284480 2 + 157873769 T a score=13579.000000 s hg38.chr6_KB021644v2_alt 84922 15 + 185823 ACACC----TTGGACCCCC s panTro5.chr6 173536852 15 + 175400573 ACACC----TTGGACCCCC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171775502 15 + 173848474 ACACC----TTGGACCCCC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11457323 15 - 12463322 ACACC----TTGGACCCCC i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170310877 9 + 172585720 ----------TGTGACCCC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169056715 9 - 170955103 ----------TGTGACCCC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8343412 9 + 10161646 ----------TGTGACCCC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1374105 9 + 3144229 ----------TGTGACCCC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96652436 9 + 98384682 ----------TGTGACCCC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8197372 9 - 10857215 ----------TGTGACCCC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15591441 9 - 23502949 ----------TGTGACCCC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169861250 9 + 171630274 ----------TCTGAACCC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1274517 9 - 2905041 ----------TATGAACGC i saiBol1.JH378287 C 0 C 0 s aotNan1.NW_018494782v1 1485114 9 - 1813869 ----------TATGACCCC i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10935170 9 - 12073884 ----------CCTGGCCCC i otoGar3.GL873575 C 0 I 2 s canFam3.chr1 56157532 14 + 122678785 -ACCC----CCGGGACCCC i canFam3.chr1 C 0 I 1 s dasNov3.JH569188 540334 17 + 760995 --ACCTTCGTTGAAACTCA i dasNov3.JH569188 C 0 C 0 e cebCap1.NW_016107695v1 1231273 9 - 2164891 I e nomLeu3.chr3 156284480 2 + 157873769 T a score=3934431.000000 s hg38.chr6_KB021644v2_alt 84937 443 + 185823 --AACTCCACAGAGC---AGGCTGCACCTGGAGCCCCAGCCCCACTC--------GGTGCTAACACGTCCTCAAGGGACTGCGTTTACTTTTGTTTTCCAGTTGAGTTTTTCCTTGTGTAAAACTGAAACATTTTG-----------------------------------------TTTTGTTTTGC-TTTTTTAAAATTTAAGCCAATTTTCTCTTTTTCAAACATCTGTGGATAAAGAAAATTACTTCTTAACA---CTTCATGAAGAACATTCATACTGTCGA---A---AACAACAAGTGGATTCCCACCCTAATCTCCGTGTCTTCCTGCTTCCATCCCTTCACCTCTCTTGGTGGGTT-AAGCTGA-TTTACTGAGTCTATTTCTAGCTTAATAATTAA-CCATAAACAGTGGCA-TTTTTCCTAAAGA------------AAGGAGAAGTCAGTGTCTCAAGTA-----------GTT-GT------------------------------TGGGAGCAG--GCCTTCAT---CTGGAGACCCTGAA----GGGCACCTGACCTTC s panTro5.chr6 173536867 443 + 175400573 --AGCTCCACAGAGC---ACACTGCACCTGGAGCCCCAGCCCCACTC--------GGTGCTAACACGTCCTCAAGGGACTGCGTTTACTTTTGTTTTCCAGTTGagtttttccttgtgtaaaactgaaacattttg-----------------------------------------ttttgttttgc-tttttcaaaatttaagccaattttctctttttcaaacatctgtggataaagaaaattacttcttaaca---cttcatgaagaacattcataCTGTCCA---A---AACAACAAGCGGATTCCCACCCTAATCTCCGTGTCTTCCCGCTTCCATCCCTTCGCCTCTCTTCGTGGGTT-AAGCTGA-TTTACTGAGTCTATTTCTAGCTTAATAATTAA-CCATAAACAGTGGCA-TTTTTCCTAAAGA------------AAGGAGAAGTCAGTGTCTCAAGTA-----------GTT-GT------------------------------TGGGAGCAG--GCCTTCAT---CTGGAGACCCTGAA----GGGCACCTGACCTTC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171775517 443 + 173848474 --AGCTCCACAGAGC---ACGCTGCACCTGGAGCCCCAGCCCCACTC--------GGTGCTAACACGTCCTCAAGGGACTGCGTTTACTTTTGTTTTCCAGTTGagtttttccttgtgtaaaactgaaacattttg-----------------------------------------ttttgttttgc-ctttttaaaatttaagccaattttctctttttcaaacatctgtggataaagaaaattacttcttaaca---cttcatgaagaacattcatactgtcga---a---aacaACAAGCGGATTCCCACCCTAATCTCCGTGTCTTCCCGCTTCCATCCCTTCGCCTCTCTTCGTGGGTT-AAGCTGA-TTTACTGAGTCTATTTCTAGCTTAATAATTAA-CCATAAACAGTGGCA-TTTTTCCTAAAGA------------AAGGAGAAGTCAGTGTCTCAAGTA-----------GTT-GT------------------------------TGGGAGCAG--GCCTTCAT---CTGGAGACCCTGAA----GGGCACCTGACCTTC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11457338 442 - 12463322 --AGCTCCACAGAGC---AGGCTGCACCTGGAGCCCCAGCCCCACTC--------GGTGCTAACACGTCCTCAAGGGACTGCGTTTACTTTTGTTTTCCAGTTGagtttttctttgtgtgaaactgaaacattttg-----------------------------------------ttttgttttgc-ttttttaaaatttaagccaattttctctttttcaaacatctgtggataaagaaaattacttcttaaca---cttcatgaagaacattcatattgtcga---a---aacaACAAG-GGATTCCCACCCTAATCTCCGTGTCTTCCCGCTTCCATCCCTTCGCCTCTCTTCGTGGGTT-AAGCTGA-TTTACTGAGCCTATTTCTAGCTTAATAATTAA-CCATAAACAGTGGCA-TTTTTCCTAAAGA------------AAGGAGAAGTCAGTGTCTCAACTA-----------GTT-GT------------------------------TGGGAGCAG--GCCTTCAT---CTGGAGACCCTGAA----GGGCACCTGACGTTC i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170310886 441 + 172585720 --AGCTCCACAGAGC---AGGCTGCACCTGGAG-CCCAGCCCCGCTC--------GGAGCTAACACGTCCTCAGGGGACTGCGTTTACTT---TCTTCCAGTCAAGTTTTTACTTGTGTGAAACTGAAACATTTTG-----------------------------------------TTTTGTTTTGC-TTTTTTAAAATTTAAGCCAATATTCTCTTTTTCAAACATCTGTGGATAGAGAAAATTACTTCTTAACA---CTTCATGAAGAACATTCATACTGTCAA---A---AACAACAAGCCCATTCCCACCCTAATCTCCGTGTCTTCCGACTTCCATCCCTTCGCCTCTCTTCATGGGTT-AAGCTGATTTTACTGAGTCTATTTCTAGCTTAATAATTAA-CCATAAACAGTGGTATTTTTTTCTCAAGA------------AAGGAGAAGTCAGTGTCTCAAGTA-----------GTT-CT------------------------------TGGGAGCAG--GCCTTCCT---CTGGAGACCCTGAA----GGGCACCTGACCTTC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169056724 441 - 170955103 --AGCTCCACAGAGC---AGGCTGCACCTGGAG-CCCAGCCCCGCTC--------GGAGCTAACACGTCCTCAGGGGACTGCGTTTACTT---TCTTCCAGTCAAGTTTTTACTTGTGTGAAACTGAAACATTTTG-----------------------------------------TTTTGTTTTGC-TTTTTTAAAATTTAAGCCAATATTCTCTTTTTCAAACATCTGTGGATAGAGAAAATTACTTCTTAACA---CTTCATGAAGAACATTCATACTGTCAA---A---AACAACAAGCCCATTCCCACCCTAATCTCCGTGTCTTCCGACTTCCATCCCTTCGCCTCTCTTCATGGGTT-AAGCTGATTTTACTGAGTCTATTTCTAGCTTAATAATTAA-CCATAAACAGTGGTATTTTTTTCTCAAGA------------AAGGAGAAGTCAGTGTCTCAAGTA-----------GTT-CT------------------------------TGGGAGCAG--GCCTTCCT---CTGGAGACCCTGAA----GGGCACCTGACCTTC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8343421 441 + 10161646 --AGCTCCACAGAGC---AGGCTGCACCTGGAG-CCCAGCCCCGCTC--------GAAGCTAACACGTCCTCAGGGGACTGCGTTTACTT---TCTTCCAGTCAGGTTTTTACTTGTGTGAAACTGAAACATTTTG-----------------------------------------TTTTGTTTTGC-TTTTTTAAAATTTAAGCCAATATTCTCTTTTTCAAACATCTGTGGATAGAGAAAATTACTTCTTAACA---CTTCATGAAGAACATTCATACTGTCAA---A---AACAACAAGCCCATTCCCACCCTAATCTCCGTGTCTTCCGACTTCCATCCCTTCGCCTCTTTTCATGGGTT-AAGCTGATTTTACTGAGTCTATTTCTAGCTTAATAATTAA-CCATAAACAGTGGTATTTTTTTCTCAAGA------------AAGGAGAAGTCAGTGTCTCAAGTA-----------GTT-CT------------------------------TGGGAGCAG--GCCTTCCT---CTGGAGACCCTGAA----GGGCACCTGACCTTC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1374114 442 + 3144229 --AGCTCCACAGAGC---AGGCTGCACCTGGAGCCCCAGTCCCGCTC--------AGAGCTAACACGTCCTCAAGGGACTGCGTTTACTT---TCTTCCAGTCaagtttctacttgtgtgaaactgaaacattttg-----------------------------------------ttttgttttgc-ttttttaaaatttaagccaattttctctttttcaaacatctgtggatagagaaaattacttcttaaca---cttcatgaagaacattcataCTGTCAA---A---AACAACAAGCCCATTTCCACCCTAATCTCCGTGTCTTCCGACTTCCATCCCTTTGCCTCTCTTCGTGGGTT-AAGCTGATTTTACTGAATCTATTTCTAGCTTAATAATTAA-CCATAAACAGTGGCATTTTTTTCTCAAGA------------AAGGAGAAGTCAGTGTCTCAAGTA-----------GTT-CT------------------------------TGGGAGCAG--GCCTTCAT---CTGGAGACCCTGAA----GGGCACCTGACCTTC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96652445 441 + 98384682 --AGCTCCACAGAGC---AGGCTGCACCTGGAGCCCCAGTCCCGCTC--------AGAGCTAACACGTCCTCAAGGGACTGCGTTTACTT---TCTTCCAGTCaagtttctacttgtgtgaaactgaaacattttg-----------------------------------------ttttgttttgc-ttttttaaaatttaagccaattttctctttttcaaacatctgtggatagagaaaattacttcttaaca---cttcatgaagaacattcataCTGTCAA---A---AACAACAAGCCCATTCCCACCCTAATCTCCGTGTCTTCCGACTTCCATCCCTTCGCCTCTCTTCAC-GGTT-AAGCTGATTTTACTAAGTCTATTTCTAGCTTAATAATTAA-CCATAAACAGTGGCATTTTTTTCTCAAGA------------AAGGAGAAGTCAGTGTCTCAAGTA-----------GTT-CT------------------------------TGGGAGCAG--GCCTTCAT---CTGGAGACCCTGAA----GGGCACCTGACCTTC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8197381 442 - 10857215 --AGCTCCACAGAGC---AGGCTGCACCTGGAGCCCCAGTCCCGCTC--------AGAGCTAACAGGTCCTCAAGGGACTGCGTTTACTT---TCTTCCAGTCAAGTTTCTACTTGTGTGAAACTGAAACATTTTG-----------------------------------------TTTTGTTTTGC-TTTTTTCAAATTTAAGCCAATTTTCTCTTTTTCAAACATCTGTGGATAGAGAAAATTACTTCTTAACA---CTTCATGAAGAACATTCATACTGTCAA---A---AACAACAAGCCCATTCCCACCCTAATCTCCGTGTCTTCCGACTTCCATCCCTTCGCCTCTCTTCACGGGTT-AAGCTGATTTTACTGAGTCCATTTCTAGCTTAATAATTAA-CCATAAACAGTGGCATTTTTTTCTCAAGA------------AAGGAGAAGTCAGTGTCTCAAGTA-----------GTT-CT------------------------------TGGGAGCAG--GCCTTCAT---CTGGAGACCCTGAA----GGGCACCTGACCTTC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15591450 435 - 23502949 --AGCTCCACAGAAC---AGGCTGCACCTGGAGCCCCAGGCCCGCTG--------GGAGCTAACATGTCCTCAGGGGGCTGCGTTTACTT---TTTTCCAGTCAAGTTTTTACCTGTGTGAAACTGAAACATTTTG-----------------------------------------TTTTGTTTTGC-TTTTCTAAAATTTAAGCCAA-------TTTCTCAAACATCTGTGGATAGAGAAAATGACTTCTTAACA---CTTCATGAAGAACATTCATACTGTCAA---A---AACAACAAGCCCATTCCCACCCTAATCTCTGTGTCTTCCGACTTCCATCCCTTCCCCTCTCTTCACGGGTT-AAGCTGATTTTACTGAGTCTATTTCTAGCTTAATAATTAA-CCATAAACAGTGGCATTTTTTTCTCAAGA------------AAGGAGAGGTCAGTGTCTCAAGTA-----------GTT-CT------------------------------TGGGAGCAG--GCCTTCAT---CTGGAGACCCTGAA----GGGCACCTGACGTTC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169861259 433 + 171630274 --AGCCCCACAGAGC---AGGCTGCACCCGGAGCCCCAGCCCCACTC--------ACTGCTGACACATCCTTGAGGGACCATGTTTACTCTTGTTTTCCAGTCAAGTTTTTCGCTGTGTGAAAC-AAAACATTTTG-----------------------------------------TTTTGTTTTGC-TTTTTAAAAATTTAAGCCAATTTTTTCTTTTTCAAACTTCTGTGGATAGAGAATATTAC-------CA---CTTCATGAAAAACATTCATACCGTCAA---A---AGCAGCAAGCCGATTCCCACCCTAA--TCTGTTTCTTCCCACCTCCATGCCATCCCCTCTATTCGCAGGTTGAAGCTGATTTTACTGAGTCTATTTCTAGCTTAACAATTAA-CCATAAACAGT-GTA--TTTTTCCAAGGA------------AAGGAGAAGCGAGAGTCTCGGGTA-----------GTT-CT------------------------------TGGGAGCCG--GCCTTCCT---TTGCAGACCCTGAG----GGGCCCCTGACCTTC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1274526 437 - 2905041 --AGCTCCACAGGGC---AGGCTGCACCCGGAGCCCCAGCCCCACTC--------ACTGCTGACACATCC-TGAGGGACCGTGCTTATGTTTGCCTTCCAGTCAAGTTTTTCCCTGTGTGAAAC-AGAACATTTTG-----------------------------------------TTTTGTTTTGC-TTTTCTAAAATTTAAGCCAGTTTTTTCTTTTTCAAACATCTGTGGATAGAGAATATTACTTCTTAACA---CTTCATGAAAAA----CGTACTGTCAA---A---AGCAGCAAGCCGATTCCCATCCTAATCTCTGTTTCTTCCCACCTCCATGCC-TTCCCTCTATTCCCAGGTTGAAGCTGATTTTACTGAGTCTATTTCTAGCTTAATAATTAA-CCATAAAGAGTGGTA--TTTTTCCAAAGA------------AAGGAGAAGCGAGAGTTTCGGGTA-----------GTT-CT------------------------------TGGGAGCTG--GCCTTCCT---TTGGAGACCCTGAG----GGGCCCCTGACCTTC i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1231282 442 - 2164891 --AGCTCCACAGAGC---AGGCTGCACCCGGAGCCCCGGCCCCACTC--------ACTGCTGACACATCC-TGAGGGACCGCGTTTACTTTTGTTTTCCAGTCAAGTTTTTCCCTGTGTGAAAC-GGAACATTTTG-----------------------------------------TTTTGTTTTGCTTTTTTTAAAATTTAAGCCAATTTTTTCTTTTTCAAACATCTGTGGATAGAGAATATTACTTCTTAACA---CTTCATGAAAAACATTGACACTGTCAA---A---AGCAACAAGCCGATTCCCACCCTAATCTCTGTTTCTTCCCACCTCCGTGCC-TTCCCTCTTTTCGCAGGTTGAAGCTGATTTTACTGAGTCTATTTCTAGCTTAATAATTAA-CCATAAACAGTGGTA--TTTTTCCAAAGA------------AAGGAGAAGCGAGAGTCTCGGGTA-----------GTT-CT------------------------------TGGGAGCTG--GCCTTCCT---TTGGAGACCCTGAG----GGGCCCCTGACCTTC i cebCap1.NW_016107695v1 I 9 C 0 s aotNan1.NW_018494782v1 1485123 439 - 1813869 --AGCTCCACGGAGC---AGGCTGCACCCGGAGCCCCAGCCC--CTC--------ACTGCTGACACATCCTTGAGAGACCATGTTTACTTTTGATTTCCAGTCAAGTTTTTCCCTGTGTGAAAC-AGAACATTTTG-----------------------------------------TTTTGTTTTGC-TCTTTTAAAATTTAAGCCAATGTTTTCTTTTTCAAACATCTGTGGATAGAGAATATTACTTCTTAACA---CTTCATGAAAAACATTCACACTGTCAA---A---AGCAACAAGCCGATTCCCACCCTGATTTCCATTTCTTCCCACCGCCACGCCGTCCCCTCTGTTCACAGGGTGAAGCTGACATTACTGAGTCTATTTCTAGCTTCACAGTTAA-CCATAAACAGTGGCA--TTTTTCCAGAGA------------AAGGAGAAGCGGGAGTCTCGGGTA-----------GTT-CT------------------------------CAGGAGCTG--GCCTTCCT---TTGGAGACCCTGAG----GG--CCCCGACCTTC i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10935181 509 - 12073884 ------------------AGGCT---CCTGGAGCCGGCACTGTACCT--------GGTGCTGACACCTGCTTGG-----CCCGTCTGCTC---CTCTCCA-TCAGGTTTTCCCCTGTGTGAAACCAAGATGGTttgttgttattgttattgacttttgttgtgttgttgttattgacttttgttgtGT-TTTATTTTGATTTGAGTCAATTTCCTCTTTTTCAAACAGTTATGGATGGAGAAAATTACTTCTTCACATTTCTTTATCAAAAACATTCACACTGTCAG---A---AAGAGGGAGCCAGTTCCCACTCTGACCTGCGTACGTCCCA--CTCAATTCCTTCACCTTGAGTCAGCGTTT-AAGCTGATTTCACTTAGTCTATTTCTAGCTCAGAAGGTAA-GCATAAACAGTAGCA-TTTTTTAGAAAGG------------GAGGAGCAGCAATTGTTTCCAGAATGACCCAAAGCGCT-CTGCTCACAGTGCCACTTGGAAAGTGGCGGTGCGGGGACAG--ACCCCAACAGACGTGGGGCTCCAAGATCTGTGCAGTCAATCTTT i otoGar3.GL873575 I 2 C 0 s canFam3.chr1 56157547 425 + 122678785 --GAACCCCCAGACCCCAAGGCCACAGC--GAG---CTGCCCCTCAC--------GGCACTGGCACGTCCTCAAGAGCCAACGCTCGTGA---CTTTCTAGTCAGATTTTCCCTTGCGTAAAACTGAAACATTTCC-----------------------------------------ATT---------TTTATTTTGATGTAAGTCAATTTCCTCTTTTTCAAACTTTTATGGAGAGA-AAAATCAC---TTGACA-TTTTTCATCAAAAACATTCCCTCTGTCCATGCC---AACCACAAGCCGATGCCGGCTGTGATCAGGGCCTCCCCAGGCAGCA------CCCCCTTTGTGAACGAGTCTAAATTCATCCTGGGGAGTCTCCCTCTAGCTCCACGGTTAG-CGATAAACAGCAACA----TTTTAAAAAG------------GAGAAAAAGCGATCGTCCGAAACC-----------GTT-CT------------------------------TGGGAGGCATTGTCTGCCT---C-GGAGAGCCGGGA----GCAGGCTTCATGCAC i canFam3.chr1 I 1 C 0 s dasNov3.JH569188 540351 437 + 760995 AGTGTTCCATGTAGC---AGCC----CCTGGAA-CCCAATTTTGTTCCTAGTTGTGATGCTTACACATCCTCATGGGCC-------AATTTGATTTTCCAGGgaagtttttcctttggtgaaaatgaaaccttt-------------------------------------------ttatgttttga-----------tttgagccaatttcctgttttttaaacctttgtggatagaaaaaataacacttt-------tttcatcaaaaacaggcatatgcgcaa---ggacagcaacgagtcaattcctactctaacttcctcttcttctcacctcagtttctccacctttcttcacaggTTTAAATGAATTTCACTGAGTCTATTTCTAGTTTAATAGTTAATTTATAAACAGTGATA-------CTAAAAAATAAATAACAAGAAGAAAAAACAATTGTCTCAAAAA-----------GTTATT------------------------------TGGAAGTAT--TGTTTCAT---TTGGAG-CCAGAAA----CCACACTTTATATTC i dasNov3.JH569188 C 0 I 179 e nomLeu3.chr3 156284480 2 + 157873769 T a score=307246.000000 s hg38.chr6_KB021644v2_alt 85380 49 + 185823 CCCACCA---CCACCTTGAGAGGGGGTGA----------------GGA--------------------CAATC------------------------------AGC-AGGCGTGG----GGAA s panTro5.chr6 173537310 49 + 175400573 CCCACCA---TCACCTTGAGAGGGGGTGA----------------GGA--------------------CAATC------------------------------AGC-AGGCGTGG----GGAA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171775960 49 + 173848474 CCCACCA---TCACCTTGAGAGGGGGTGA----------------GGA--------------------CAATC------------------------------AGC-AGGCGTGG----GGAA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11457780 49 - 12463322 CCCACCA---TCACCTTGAGAGGAGGTGA----------------GGA--------------------CAATC------------------------------AGC-AGGCGTGG----GGAA i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170311327 52 + 172585720 CCCGCCA---TCACCTTGAGAGGGGGTGA----------------GGA-----------------GGACAATC------------------------------AGC-GGGCATGG----GGAA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169057165 52 - 170955103 CCCGCCA---TCACCTTGAGAGGGGGTGA----------------GGA-----------------GGACAATC------------------------------AGC-GGGCATGG----GGAA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8343862 52 + 10161646 CCCGCCA---TCACCTTGAGAGGGGGTGA----------------GGA-----------------GGACAATC------------------------------AGC-GGGCATGG----GGAA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1374556 52 + 3144229 CCCGCCA---TCACCTTGAGAGGGGGTGA----------------GGA-----------------AGACAATC------------------------------AGC-GGGCATGG----GGAA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96652886 52 + 98384682 CCCGCCA---TCACCTTGAGAGGGGGGGA----------------GGA-----------------GGACAATC------------------------------AGT-GGGCCTGG----GGAA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8197823 52 - 10857215 CCCGCCA---TCACCTTGAGAGGGGGTGA----------------GGA-----------------GGACAATC------------------------------AGC-GGGCATGG----GGAA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15591885 52 - 23502949 CCCGCCA---TCACCTTGAGAGGGGGTGA----------------GGA-----------------GGCTAATC------------------------------AGC-GGGCATGG----GGAA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169861692 50 + 171630274 TCCA-CA---TCACCTCGAGAGG-GTTGA----------------GGA-----------------GGATAGTC------------------------------AGC-GGGCGTTG----GGAA i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1274963 51 - 2905041 TCCAGCA---TCACCTTGAGAGG-GGTGA----------------AGA-----------------GGACAGTC------------------------------AGC-CGGCATTG----GGAA i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1231724 49 - 2164891 TCCAGCA---TCAACTTAAGAGG-GGT-------------------AA-----------------GGACAGTC------------------------------AGCAGGGTGTTG----GGAA i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1485562 51 - 1813869 TCCAGCA---TCACCTTGAGAGG-GGTGA----------------GGA-----------------GGACAGTC------------------------------AGC-AGGCGTTG----GGAA i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10935690 49 - 12073884 CCAGTCA---TTTATGTGGAAAA---AGA----------------AAG-----------------TGTCATGC------------------------------TGG-AAATGTCA----AAAA i otoGar3.GL873575 C 0 I 4 s canFam3.chr1 56157972 122 + 122678785 CCCGGCAGGGGCGGGTTGAGGGACGATGATTAATACCAGACGTCCGGAGAACCACGTGAGCATGCGGGCAATCTTTCTTATTCAGTTATGCAGAATATTTAAAAGT-AAGTGCTGTGTTGGAA i canFam3.chr1 C 0 I 16 e dasNov3.JH569188 540788 179 + 760995 I e nomLeu3.chr3 156284480 2 + 157873769 T a score=11475.000000 s hg38.chr6_KB021644v2_alt 85429 1 + 185823 C s panTro5.chr6 173537359 1 + 175400573 C i panTro5.chr6 C 0 C 0 s panPan2.chr6 171776009 1 + 173848474 C i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11457829 1 - 12463322 C i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156284478 1 + 157873769 C i nomLeu3.chr3 T 2 C 0 s rheMac8.chr4 170311379 1 + 172585720 C i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169057217 1 - 170955103 C i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8343914 1 + 10161646 C i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1374608 1 + 3144229 C i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96652938 1 + 98384682 C i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8197875 1 - 10857215 C i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15591937 1 - 23502949 C i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169861742 1 + 171630274 C i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1275014 1 - 2905041 C i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1231773 1 - 2164891 C i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1485613 1 - 1813869 C i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10935743 1 - 12073884 G i otoGar3.GL873575 I 4 C 0 s canFam3.chr1 56158110 1 + 122678785 C i canFam3.chr1 I 16 C 0 e dasNov3.JH569188 540788 179 + 760995 I a score=4304587.000000 s hg38.chr6_KB021644v2_alt 85430 466 + 185823 CCAAAAG-CTTTTGCTTTGATTCACAGGTATTTCAGTTTGTTTTTAGAGAAAGCATGTAGATTTTCTTCTTAGAGTCTGCCTTTGTGT--------------GTCAGATTCAATATCCCTAACACCATTGTTTTGGGGAGCAGAAGGAGGGAGCATCATGAACCTGCAGAATGAGGTTAT-GGTGGGATTATCCCGAGAGATACAGGAGGAG---GAACATGCATTTC---TGCATTGAAGCAGAGTACACAGG-------------------------------------------GCTTAGGTTTCCAGAGCCCTTTTTAGGGGTGC-CGTGAGAACCATGAGGATGCAGCTGAAGCCC---ACCTGG---CCACGGGTGGCCCCACACCTTGCTC--------GCGG----CCCAGAG------CTCTCCCCCACTTGGCTGCACCCAGTGCTAGCCGCTGACCCCTGGG--GACGCAGCCAAGATAGGGCTAG-TGGTCACCTTAGAATAgggcaggggctggggctggggctggggctggAATGGGGCACAGAA s panTro5.chr6 173537360 460 + 175400573 CCAAAAG-CTTTTGCTTTGATTCACAGGTATTTCAGTTTGTTTTTAGAGAAAGCATGTAGATTTTCCTCTTAGAGTCTGCCTTTGTGT--------------GTCGGATTCAATATCCCTAACACCATTGTTTTTGGGAGCAGAAGGAGGGAGCATCGTGAACCTGCAGAATGAGGTTAT-GGTGGGATTATCCCGAGAGATACAGGAGGAG---GAACACGCATTTC---TGCATTGAAGCAGAGTACACAGG-------------------------------------------GCTTAGGTTTCCAGAGCCCTTTTTAGGGGTGC-CGTGAGAACCATGAGGATGCAGCTGAAGCCC---ACCTGG---CCACGGGTGGCCCCACACCTTGCTT--------GGGG----CCCAGAG------CTCTCCCCCACATGGCTGCACCCAGTGCCAGCTGCTGACCCCTGGG--GACACAGCCAAGACAGGGCTAG-TGGTCACCTTAGAATAgggcaggggctggggctggggctgg------aatggggcACAGAA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171776010 460 + 173848474 CCAAAAG-CTTTTGCTTTGATTCACAGGTATTTCAGTTTGTTTTTAGAGAAAGCATGTAGATTTTCCTCTTAGAGTCTGCCTTTGTGT--------------GTCGGATTCAATATCCCTAACACCATTGTTTTTGGGAGCAGAAGGAGGGAGCATCGTGAACCTGCAGAATGAGGTTAT-GGTGGGATTATCCCGAGAGATACAGGAGGAG---GAACACGCATTTC---TGCATTGAAGCAGAGTACACAGG-------------------------------------------GCTTAGGTTTCCAGAGCCCTTTTTAGGGGTGC-CATGAGAACCATGAGGATGCAGCTGAAGCCC---ACCTGG---CCACGGGTGGCCCCACACCTTGCTT--------GGGG----CCCAGAG------CTCTCCCCCACATGGCTGCACCCAGTGCCAGCTGCTGACCCCTGGG--GACGCAGCCAAGACAGGGCTAG-TGGTCACCTTAGAATAgggcaggggctggggctggggctgg------aatggggcACAGAA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11457830 469 - 12463322 CCAAAAG-CTTTTGCTTTGATTCACAGGTATTTCAGTTTGTTTTTAGAGAAAGCATGTAGATTTTCCTCTTAGAGTCTGCCTTTGTGT--------------GTCGGATTCAATATCCCTAACACCATTGTTTTGGGGAGCAGAAGGAGGGAGCATCGTGAACCTGCAGAATGAGGTTAT-GGTGGGATTATCCCGAGACATACAGGAGGAGGAAGAACACGCATTTC---TGCACTGAAGCAGAGTACACAGG-------------------------------------------GCTTAGGTTTCCAAAGCCCTTTTTAGGGGTGC-CGTGAGAACCATGAGGATGCAGCTGAAGCCC---ACCTGG---CCACGGGTGGCCCCACACCTTGCTT--------GGGG----CCCAGAG------CTCTCCCCCACGTGGCTGCACCCAGTGCCAGCCGCTGACCCCTGGG--GACGCAGCCAAGACAGGGCTAG-TGGTCACCTTAGAATAgggcaggggctggggctggggctggggctggAATGGGGCACAGAA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156284479 459 + 157873769 CGAAAAG-CTTTTGCTTTGATTCAGAGGTATTTCAGTTTGTTTTTAGAGAAAGCATGTAGATTTTCCTCTTAGAGTCTGCCTTTGTGT--------------GTCGGATTCAATATCCCTAACACCATTGTTTTTGGGAGCAGAAGGAGGGAGCATCGTGAACCTGCAGAATGAGGTTAT-GGTGGGCTTACCCCAAGAGATACAGGAGGAC---GAACACGCATTTC---TGCATTGAAGCAGAGTACGCAGG-------------------------------------------GCTTAGGTTTCCAGAGCCCTTTTTA-GGGTGC-CGTGAGAACCATGAGGATGCAGCTGAAGCCC---ACCTGG---CCACGGGTGGCCCCACACCTTGCTC--------GGGG----CCCAGAG------CTCTCCCCCACATGGCTGCACCCAGTGCCAGCCGCTGACCCCTGGG--GACGCGGCCAAGACAGGGCTAG-TGGTCACCTTAGAATAgggcaggggctgggactggggctgg------aatggggcACAGAG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170311380 459 + 172585720 CCAAAAA-CTTTTGCTTTGATTCACAGGTGTTTCAGTTTGTTTTTAGAGAAAGCATGTAGATTTCCCTCTTAGAGTTTGCCTTTGTGT--------------GTCAGATTCAATATCTCTAACACTACTGTTTTTGGGAGCAGAAGGAGGGAGCATCGTGAACCTACAGAATGAGGTTAT-GATGGGATTATCCTGAGAGGTACAGGAGGAA---GAACACCCATTTC---TGCACTGAAGCAGAGTAAACAAG-------------------------------------------GCTTAGGTTTCCAGAGCCCTTTTCAGAGGCGT-CGTGAGAACCATGAGGATGCAGCTGAAGCCT---GCCTGA---CCACGGATAGCCCCACACCTTGCTC--------GGGG----ACCAGGG------CTCTCCCCCACGTGGCTGTACCCAGTGCCAGCCGCTGATCCCTGGG--GACGCGGCCAAGGCAGGGCTAG-TGGTCGCCTTAGAATAGGGCA-GGGCTGGGACTGGGGCTAG------GATGATGCACAGAA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169057218 459 - 170955103 CCAAAAA-CTTTTGCTTTGATTCACAGGTGTTTCAGTTTGTTTTTAGAGAAAGCATGTAGATTTCCCTCTTAGAGTTTGCCTTTGTGT--------------GTCAGATTCAATATCTCTAACACTACTGTTTTTGGGAGCAGAAGGAGGGAGCATCGTGAACCTACAGAATGAGGTTAT-GATGGGATTATCCTGAGAGGTACAGGAGGAA---GAACACCCATTTC---TGCACTGAAGCAGAGTAAACAAG-------------------------------------------GCTTAGGTTTCCAGAGCCCTTTTCAGAGGCGT-CGTGAGAACCATGAGGATGCAGCTGAAGCCT---GCCTGA---CCACGGATAGCCCCACACCTTGCTC--------GGGG----ACCAGGG------CTCTCCCCCACGTGGCTGTACCCAGTGCCAGCCACTGATCCCTGGG--GACGCGGCCAAGGCAGGGCTAG-TGGTCACCTTAGAATAGAGCA-GGGCTGGGACTGGGGCTAG------GATGATGCACAGAA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8343915 459 + 10161646 CCAAAAA-CTTTTGCTTTGATTCACAGGTGTTTCAGTTTGTTTTTAGAGAAAGCATGTAGATTTCCCTCTTAGAGTTTGCCTTTGTGT--------------GTCAGATTCAATATCTCTAACACTACTGTTTTTGGGAGCAGAAGGAGGGAGCATCGTGAACCTACAGAATGAGGTTAT-GATGGGATTATCCTGAGAGGTACAGGAGGAA---GAACACCCATTTC---TGCACTGAAGCAGAGTAAACAAG-------------------------------------------GCTTAGGTTTCCAGAGCCCTTTTCAGAGGCGT-CGTGAGAACCATGAGGATGCAGCTGAAGCCT---GCCTGA---CCACGGATAGCCCCACACCTTGCTC--------GGGG----ACCAGGG------CTCTCCCCCACGTGGCCGTACCCAGTGCCAGCCGCTGATCCCTGGG--GACGCGGCCAAGGCAGGGCTAG-TGGTCGCCTTAGAATAGGGCA-GGGCTGGGACTGGGGCTAG------GATGATGCACAGAA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1374609 456 + 3144229 CCAAAAA-C--TTGCTTTGATTCACAGGTGTTTCAGTTTGTTTTTAGAGAAAGCATGTAGATTTCCCTCTTAGAGTTTGCCTTTGTGT--------------GTCAGATTCAATATCTCTAACACCACTGTTTTTGGGAGCAGAAGGA-GGAGCATTGTGAACTTGCAGAATGAGGTCAT-GATGGGATTATCCTGAGAGGTACAGGAGGAA---GAACACCCATTTC---TGCACTGAAGCAGAGTACACAGG-------------------------------------------GCTTAGGTTTCCAGAGCCCTTTTTAGGGGCGT-CGTGAGAACCATGAGGATGCAGCTGAAGCCC---GCCTGA---CCACGGATGGCCCCACACCTTGCTC--------GGGG----ACCAGGG------CTCTCCCCCACGTGGCTGCACCCAGTGCCAGCTGCAGATCCCTGGG--GACGCGGCCAAGGCAGGGCTAG-TGGTCGCCTTAGAATGGGGCA-GGGCTGGGACTGGGGCTAG------GATGATGCACAGAA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96652939 460 + 98384682 CCAAAAAACTTTTGCTTTGATTCACAGGTGTTTCAGCTTGCTTTTAGAGAAAGCGTGTCGATTTTCCTCTTAGAGTTTGCCTTTGTGT--------------GTCAGATTCAATATCTCTAACACTACTGTTTTTGGGAGCAGAAGGAGGGAGCCTCGTGAACCTGCAGAATGAGGTTAT-GATGGGATTATCCTGAGAGGTACAGGAGGAA---GAACACCCATTTC---TGCATGGAAGCAGAGTACACAAG-------------------------------------------GCTTAGGTTTCCAGAGCCCTTTTTAGGGGTGT-CGTGAGAACCATGAGGACGCAGCTGAAGCCC---GCCTGA---CCACGGATGGCCCCACACCTTGCTC--------GGGG----ACCAGGG------CTCTCCCTGACGTGGCTGCACCCAGTGCCAGCCGCTGATCCCTGGG--GACGCGGCCAAGGCAGGGCTAG-TGGTCTCCTTAGAATAGGGCA-GGGCTGGGACTGGGGCTGG------GATGATGCACAGAA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8197876 457 - 10857215 CCAAAAA---CTTGCTTTGATTCACAGGTGTTTCAGTTTGTTTTTAGAGAAAGCATGTAGATTTCCCTCTTAGAGTTTGCCTTTGTGT--------------GTCAGATTCAATATCTCTAACACCACTGTGTTTGGGAGCAGAAGGAGGGAGCATTGTGAACTTGCAGAACGAGGTTAT-GATGGGATTATCCTGAGAGGTACAGGAGGAG---GAACACCCATTTC---TGCACTGAAGCAGAGTACACAGG-------------------------------------------GCTTAGGTTTCCAGAGCCCTTTTTAGGGGCGT-CGTGAGAACCATGAGGATGCAGCTGAAGCCC---GCCTGA---CCACGGATAGCCCCACACCTTGCTC--------GGGG----ACCAGGG------CTCTCCCCCACGTGGCTGCACCCAGTGCCAGCTGCAGATCCCTGGG--GACGCGGCCAAGGCAGGGCTAG-TGGTCGCCTTAGAATAGGGCA-GGGCTGGGACTGGGGCTAG------GATGATGCACAGAA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15591938 457 - 23502949 CCAAAAG-CTTTTGCTTTGATTCACAGGTGTTTCAGTTTGTTTTTAGAGAAAGCATGTAGATTTTCCTCTTACAGTTTGCCTTTGTGT--------------GTCAGATTCAATATCT-TAACACTACTGTTTTTGGGAGCAGAAGGAGAGAGCATCGTGAACCTGCAGAATGAGGTTAT-GATGGGATTATCCTGAGAGGTACAGGAGGAA---GAACACCCATTTC---TGCATTGAAGCAGAGTACACGGG-------------------------------------------GCTTAGGTTTCCAGAGCTCTTTTTAGGGGCAT-CGTGAGAACCATGAGGATGCAGCTGAAGCCC---GCCTGA---CCATGGATGGCCCCATACCTTGCTC--------GGGG----ACCAGGG------CTCTCTCCTACACGGCTGCACCCAGTGCCAGCCGCTGATCCCTGGG--GACGCGGCCAAGGCA-GGTTAG-TGGTCGCCATAGAATAGGGCA-GGGCTGGGGCTGGGGCTGG------GATGATGCACAGAA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169861743 427 + 171630274 CCAAAAG-CTTTTGCTTTGATTCATGGGCATTTCCGTTTG-TTTTAGAGAAAGCACAGAGGCTTTCCTCTTAGAGTTTTCC-TTGTGT--------------GTTGGATTCAATATCCTTAATGCTGTTGTTTTTGGGAGCAGAAGGAGGGAGCATCGTGACCCTGCAGAATGAGATCAT-GATGGGATT-TCCTGAGAGACAGAGGAGGAG---GAACCTGCATTCC---TGTGTT-AAACAGAGTACACGGG-------------------------------------------ATGTAGGTTTCCAGAGCTCTTCTTAGGGGTGT-CATGAGAACCATGAGGGTGCAGCTGCCATCC---ACCTGG---CCACAGGTGGCCTCACACC-TGCTC--------AGGG----CTCGGGG------TTCTCCACCACGTGGCT----CCAGTGTCGGC-GCTGACCCTTGG-------------------GGCTAG-TGGTAGCCTTAGAATAGGGCA------TCGGCTGGGTCTGG------GATGGGGCAGAGAA i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1275015 423 - 2905041 CCAAAAG-CTTCTGCTTTGATTCACAGGTATTGCAGTTTG-TTTTAGAGAAAGCACATAGGTTTTCCTCTTAGAGTTTGCCTTTGTGT--------------GTTGGATTCAATATCCTTAATGCCGTTGTTCTTGGGAGCAGCAGGAGGGAGCATCATGACCCAGCAGAATGAGATCAT-GATGGGATT-CCCCAAGAGATACAGGGGGAG---GAACCTGCATTCC---TGCATT-AAACAGAGTCCACAGT-------------------------------------------GTATAGGTTTCCAGAGCGCTTTTTAGGGGCGT-CATGAGAACCATGAGGGTGCAGCTGATGCCC---ACCTGG---CCACGGGTGATCTCAAACC-TGCTC--------GGGG----CCCGGGG------TTCTCCCCCACGTGGCTGCACCCAGTGCCGGC-GCTGACCCC-----------------------------TGGTCGCCTTAGAATAGGGCA------TCGACTGGGGCTGG------GATGGGGCAGAGAA i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1231774 430 - 2164891 CCAAAAG-CTTCTGCTTTGATTCACAGGTATTTCAGTTTG-TTTTAGAGAAAGCACAGAGATTTTCCTCTTAGAGTTTGCCTTTGTGT--------------GTTGGATTCAGTATCCTTAATGCCGCTGTTTTTGGGAGCAGAAGGAGGAAGCATCGTGACCCAGCAGAATGAGATCAT-GATGGGATT-CCCCGAGAGATACAGGAGGAG---GAACCCGCATTCC---TGCATT-AAACAGAGTGCACAGG-------------------------------------------GTATAGGTTTCCAGAGCTCTTTTTAGGGGCCT-CATGAGAACCATGAGAGTGCAGCTGACGCCC---ACCTGG---CCATGGGTGACCTCACACC-TGCTC----------GG----TCAGGGG------TTCTTCACCACGTGGCTGTACCCAGTGCCAGT-GCTGACCCCTGG-------------------GGCTTG-TGGTCGCCTTAGAATAGGGCA------TCGGCTGGGGCTGG------GATGGGGCAGAGAA i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1485614 432 - 1813869 CCAAAAT-CTTCTGCTTTGATTCAAAGGTATTTCAGTTTG-TTTTAGAGAAAGCACATAGGTTTTCCTCTTAGAGTTTGCCTTTGTGT--------------GTTGGATTCAATATCCTTAATGCCGTTGTTTTTGGGAGCAGAAGGAGGGAGCATCGTGACCCGGCAGAATGAGATCAT-GATGGGATT-CCCCGAGAGATACAGGAGGGG---GAACCCGCATTCC---TGCATG-AAACAGAGTACCCAGG-------------------------------------------GTATAGGTTTCCAGAGCTCTTTTTAGGGGCGT-CATGAGAACCATGAGGGTTCAGCTGATGCCC---ACCTGG---CCACAGGTGACCTCACACC-TGCTC--------AAGG----CCCGGGA------TTCTCCCCCATGTGGCTGCACCCAGTGCCGGC-GCTGACCCCTGG-------------------GGCGAG-TGGTAGCCTTAGAATAGGGCA------TCTGCTGGGGCTGG------GATGGGGCAGAGAA i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10935744 448 - 12073884 CTGAAAG-GGTTAGTTTTGATTTATAGATACTGTGGTTTTGTTCCAGAGCTGAAATGTAGATGACTCT-TCAGTGTCTGGAATCATGTTGAT--GGGGAAGGGTCAGAATCTGTGTCCCTAATGTTACTGTCTCTAGGAGCAGAGGCAGGGAGCCTT-CGAGGCTGGAGA---------------TGATTATCCCAAGAGATGCAGGAGAAC---ACACACTC-CTTC---TGTGCTTGAGCAGAGGACGTGGG-------------------------------------------TCTTACATTCCAAGAGCTCTTTTTAGGGGTGTGTACTAGAAAAACAAGGATGAAGCCAAATGCCGTGGTCTGGTTTCAGTGGGTGGTCCAGCACCTTGCGC--------TGGGCCTCCCCGTGG------CCTTTCCCCA-GGAGCT----CCAGTGGGAGGTGCT----TCTTGG--AACGCAGCTGAAGCAGTGCAAG-TGGC--CCCTTGGCCCGGGCA-------AGGCCATGACCCG------GGTGGGGCAGAGGA i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56158111 450 + 122678785 CTCAAAG-CTTTGGGTTTGATTTACAGATGTTACCGTTTTGTTCTAGAGAAA--AAGCAATTGTCCCTCATAGAATCTACCTTCATATAGACA-GGAGAGGGGTCTGAATCCAT-CCCCCGATGTGATTGTTTTCAGGGAGAGGAGG-GGTAATGTTGCAACCTCGCAGGATGAGATCATCTGAGAGCTTATCCCAAGAGATGAAGGAGAAA---GGTTATGCATGCCCGTTGCATCTAAGCAGAGTA-ATAGGTTT----------------------------------------TTTTTAATTTCCAGAGGTGTTTTTAGGGATTTGGACTAGAAAAATAAGAATGAGGCCGGAG------GTGTTT---CTGTAGGTAGGCTCCCAGCTGGCTCCCAGGTGAAGGG----AGCAAAA-----------------ATAGTTGC---------------CTGCTCCTTGAGCTGATGTAGCCAACACAGAGCTGGCCCGTCACCTTGGA-----GCA---ACCACGACTGGGAATGG------GACGAAGCAGAGGA i canFam3.chr1 C 0 I 1239 s dasNov3.JH569188 540967 510 + 760995 CTCAAAG-CTTTAGCTTTAGTT-ACAGATATTTTGGTTTTGTCCTAGAGGAAAAATGTGGGTGGTCCTTTTAGAATTTACCTTCATAGAAATATAAGAAATAATTGAAGTCAATTTTCCCAA------TGTTTCTAGAAGGAGAAGTAGGGAAAGTTATAAACATATAGAATGAGAACACCTGTGAGATTATCCCAAGAGATGAAGAAGGAA---TACCTGCTCCTTC---TACATTTAAGCAGAGTACACAGGTTTttttgtttatttttgttttgttttgtttgttttgttttgcttttTAATTTTCAGGGCTCTTTTTACAGATAGGGACTAGGAAAGTAAGGATAAAGTCAAAGATA---TTCTT----TTATGGATAGTCTACCAAAACTCTT--------TGGG----TCTCGTGGACTGTTCCTCTTCTAAGCAAACATGTACAGTAATGATTACTTCCTTCCTG---GATGTAGCCAAAGACAAACCTG-ATGTCACCTTAAAATAGGGCA------AAATTTAAGAATGG------TCTGAGACAAAGGA i dasNov3.JH569188 I 179 C 0 a score=90476.000000 s hg38.chr6_KB021644v2_alt 85896 10 + 185823 TAACCATCCT--- s panTro5.chr6 173537820 10 + 175400573 TAACCATCCT--- i panTro5.chr6 C 0 C 0 s panPan2.chr6 171776470 10 + 173848474 TAACCATCCT--- i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11458299 10 - 12463322 TAACCATCCT--- i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156284938 10 + 157873769 TAACCATCCT--- i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170311839 10 + 172585720 TAGCCATCCT--- i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169057677 10 - 170955103 TAGCCATCCT--- i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8344374 10 + 10161646 TAGCCATCCT--- i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1375065 10 + 3144229 TAGCCATCCT--- i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96653399 10 + 98384682 TAGCCATCCT--- i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8198333 10 - 10857215 TAGCCATCCT--- i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15592395 10 - 23502949 TAGCCATCCT--- i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169862170 10 + 171630274 TAACCATCTT--- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1275438 10 - 2905041 TAACCACCTT--- i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1232204 10 - 2164891 TAACCATCTT--- i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1486046 10 - 1813869 TAACCATCTT--- i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10936192 10 - 12073884 AGGGTATTTT--- i otoGar3.GL873575 C 0 C 0 s dasNov3.JH569188 541477 9 + 760995 ----TATTTTCTT i dasNov3.JH569188 C 0 C 0 e canFam3.chr1 56158561 1239 + 122678785 I a score=1215125.000000 s hg38.chr6_KB021644v2_alt 85906 127 + 185823 C---TTCACAGCTCAA------CAGG-GCCTTTTGTTCTGTTTTTACATTTAATACTG----TGATTCCAGTAGACATCTACCTGATCCAAAGTTACAATGTCCCAGAGTAGTCCACAGACTGTGAATCTGAGACCTTTCA s panTro5.chr6 173537830 127 + 175400573 C---TTCACAGCTCAA------CAGG-GCCTTTTGTTCTGTTTTTACATTTAATACTG----TGATTCCTGCAGACATCTACCTGATCCAAAGTTACAATCTCCCAGAGTAGTCCACAGACTGTGAATCTGAGACCTTTCA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171776480 127 + 173848474 C---TTCACAGCTCAA------CAGG-GCCTTTTGTTCTGTTTTTACATTTAATACTG----TGATTCCTGCAGACATCTACCTGATCCAAAGTTACAATCTCCCAGAGTAGTCCACAGACTGTGAATCTGAGACCTTTCA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11458309 127 - 12463322 C---TTCACAGCTCAA------CAGG-GCCTTTTGTTCTGTTTTTACATTTAATACTG----TGATTCCAGTAGACATCTACCTGATCCAAAGTTACAGTCTCCCAGAGTAGTCCACAGACTGTGAATCTGAGACCTTTCA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156284948 116 + 157873769 C---TTCGCAGCCCAA------CAGG-GCCTTTTGTTCTGTTTTTACATTTAATACTC----TGATTCCAGTA-----------GATCCAAAGTTACAGTCTCCCAGAGTAGGCCACAGACTGTGAATCTGAGACGTTTTA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170311849 129 + 172585720 C---TTCGTAGTTCAA------CAGG-GCCTTTTGTTCTGTTTGTACGTTTAATACTCTT--TGATTCCAGCAGACATCTGCCTGATCCAAAGTTACAGTCTCCCAGAGGAGTCCCCAGACTGTGAATCTGAGACCTTTTT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169057687 129 - 170955103 C---TTCGTAGTTCAA------CAGG-GCCTTTTGTTCTGTTTGTACGTTTAATACTCTT--TGATTCCAGCAGACATCTGCCTGATCCAAAGTTACAGTCTCCCAGAGGAGTCCCCAGACTGTGAATCTGAGACCTTTTT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8344384 129 + 10161646 C---TTCGTAGTTCAA------CAGG-GCCTTTTGTTCTGTTTGTACGTTTAATACTCTT--TGATTCCAGCAGACATCTGCCTGATCCAAAGTTACAGTCTCCCAGAGGAGTCCCCAGACTGTGAATCTGAGACCTTTTT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1375075 129 + 3144229 C---TTCGTAGTTCAA------CAGG-GCCTTTTGTTCTGTTTGTACGTTTAATACTCTT--TGATTCCAGCAGACATCTGCCTGATCCAAAGTTACAGTCTCCCAGAGGAGTCCCCAGACTGTGAATCTGAGACCTTTTT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96653409 126 + 98384682 C---TTCGTAGTTCAA------CAGG-GCC-TTTGTTCTGTTTGTACGTTTAATACTCTT--TGATTCCAGCAGACATCTGCCTGATCCAAAGTTACAGTCTCCC--AGGAGTCCCCAGACTGTGAATCTGAGACCCTTTT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8198343 129 - 10857215 C---TTCGTAGTTCAA------CAGG-GCCTTTTGTTCTGTTTGTACGTTTAATACTCTT--TGATTCCAGCAGACATCTGCCTGATCCAAAGTTACAGTCTCCCAGAGGAGTCCCCAGACTGTGAATCTGAGACCTTTTT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15592405 129 - 23502949 C---TTCGTAGTTCAA------CAGG-GCCTTTTGTTCTCTTTGTACGTTTAATACTCTT--TGATTCCAGCAGACATCTGCCTGATCCAAAGTTACAGTCTCCCAGAGGAGTCCCCAGACTGGGAATCTGAGACCTTTTT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169862180 121 + 171630274 C---TTCACAGCTCAT------GAGG-GCCATTTGTTCTGTTTTTCCATTTAATACTCTT--GGATTCCCAGAGACATCTACCTGGTC--------CAGTCTCCCAGAGCAGTCCACAGACCGTGAACCTGAGACCTGTTA i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1275448 121 - 2905041 C---TTCACAGCTCAA------GAGA-GCCTTTTGTTCTGTTTTTCCATTTAAGACTCTT--GGATTGCAGGAGACATCTACCGGGTC--------CAGTCTCCCAGAGCAGTCCGCAGACTGTGAACCTGAGACCTTTTA i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1232214 121 - 2164891 C---TTCACAGCTCAA------GAGG-GCCTTTTGTTCTGTTTTTCCATTTAAGACTCTT--GGATTACAGGAGACATCTACCTTGTC--------CAGCCTCCCAGAGCAGTCCGCAGACTGGGAACCTGAGGCCTTTTA i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1486056 121 - 1813869 C---TTCACAGCTTGA------GAGG-GCCTTTTGTTCTGTTTTTCCATTTAATACTCGT--GGATTATAAGAGACATCTACCTGGTC--------CAGTCTCCCAGAGCAGTCCACAGACCGTGAACCTGAGACCTTTTA i aotNan1.NW_018494782v1 C 0 I 20 s otoGar3.GL873575 10936202 129 - 12073884 TTAATTTGTGGCTCA-------CAAG-GCC-TTTGTGCTACTTTTCCATTTAATATTCTT--TGAATTCAATACGTTTCTGTGTGATCCAAAGTG-CAGTCTTCCAAAGCGGTTCATAGACTGTAAGCCCAAAACCTTTCA i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56159800 135 + 122678785 c---ttcaccgcctgagctacccaggcgccccTCTTTCTATTTTCGAATTTAATATGCTTACTGAATCTGACATATACCTGTCTTATCCATAGCCACAGACCTCCAGTGTGGCTCA---ACTGTACCTCTGAGGCTGTCTA i canFam3.chr1 I 1239 C 0 s dasNov3.JH569188 541486 117 + 760995 C---TTCACAGTTAAA------GTGG-GCCTTTTGTCTTAATTTGACAATTAATAGTGTT--TGAATTCAATGTATTTCCACCTGTTCCACAGCTACAGTCTTCCAATGCA------------TAAATGTAAAACATTTTA i dasNov3.JH569188 C 0 C 0 a score=138295.000000 s hg38.chr6_KB021644v2_alt 86033 24 + 185823 CATAACCTAGCC-------AAACGGTTCTGA s panTro5.chr6 173537957 24 + 175400573 CATAACCTAGCC-------AAATGGTTCTGA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171776607 24 + 173848474 CATAACCTAGCC-------AAATGGTTCTGA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11458436 24 - 12463322 CATAACCTAGCC-------AAACGGTTCTGA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156285064 24 + 157873769 CATAACCTAGCC-------AAACCATCCTGA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170311978 24 + 172585720 CATCACCTGGCC-------AAACCGGCCTGA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169057816 24 - 170955103 CATCACCTGGCC-------AAACCGGCCTGA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8344513 24 + 10161646 CATCACCTGGCC-------AAACCGGCCTGA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1375204 24 + 3144229 CATCACCTGGCC-------AAAACGGCCTGA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96653535 24 + 98384682 CATCACCTGGCC-------AAACCGTCCTGA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8198472 24 - 10857215 CATCACCTGGCC-------AAACTGGCCTGA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15592534 24 - 23502949 CATCACCTGGCC-------AAACCGGCCTGA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169862301 21 + 171630274 ---GACGTAGCC-------AAATCATCCTGA i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1275569 21 - 2905041 ---GACGTAGCC-------AAATCATCCTGA i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1232335 21 - 2164891 ---GATGTAGCC-------AAATCAACCTGA i cebCap1.NW_016107695v1 C 0 C 0 s otoGar3.GL873575 10936331 26 - 12073884 -----GCTGGCCTTGTGGAGGGGGGCACTGG i otoGar3.GL873575 C 0 I 2 s canFam3.chr1 56159935 23 + 122678785 -GGGGCCTCCCC-------CAGGCAGCCTAG i canFam3.chr1 C 0 I 2 s dasNov3.JH569188 541603 24 + 760995 GAGAACTTCATT-------AGGCAATCCCCA i dasNov3.JH569188 C 0 I 8 e aotNan1.NW_018494782v1 1486177 20 - 1813869 I a score=9728193.000000 s hg38.chr6_KB021644v2_alt 86057 813 + 185823 GCTGTCAT---------------------------GATC-CAGAAAAAAT---ATCTTCTGAGAAAGAAAATGAAAGTGAAAGTAATCGGAGGAAAGGCCAGATAAATTTCATTTGCACAAAGCACAAGGATTCTTCCCAAAGGTTCCAGAT-----GGGGG--GACTTCTGTTTAGGGTCTGACAGATCACAGCTCACCTGTTTTATTATGAAGCATGACTGCTCACCAGGC---TC---TA---CTGCTGAACAGGACCTGTTCCGAATTCAGACTTGGCTAGTAAAAGCTCTATAATAAAAACAATTCTTTGATGTCAAATCCCAGCACATAAAATCCCAAAATATGCTTTTACTAAGGTGAACGAGTGAATGGTTTGGATTAACATGTGAACAGTTACAAATGTCAGAGGCTGGGAGGGATATTAACTCAACTGGAAATTTCACTCAAGCCAGGTGTCTGGTTTAAATTTGAAGAGTTGAATATATTAAATATGCTTTA-TTGAGCTGTCATGCATGAAATTGCATCCTTATGTATC-GGACAAACATCGGATGGATTTCCCAGAAGTTTGTGGGAGACCGAC-AGTCTTTTGGAGACATGGAGGAGAAGACCTTGTCTCCA-CCCGCC-TCGTGCATAG-ACCTAGAGCCCGGCCAAGCCTGGGGACACCAAGTCCTAGGCAG-ATGCTGCCC--GTGGGGCTGCTGACACCCT----GGGCCAGC-GGGCTTTTCCA---CGGAGAATG------------------------GAAACGGCCTGGACTGAAACTGCACAGGG-GCAGCAGAGTCAACAGGGCAGCTGCTCTCCCTGTGGGAAGCGAA-AG-AGCAACTCTTACTCT-CTCTGCAGAGGACATTTGGAGGGTTCTCCAGC s panTro5.chr6 173537981 813 + 175400573 GCTGTCAT---------------------------GATC-CAGAAAAAAT---ATCTTCTGAGAAAGAAAATGAAAGCGAAAGTAATCAGAGGAAAGGCCAGATAAATTTCATTTGCGCAAAGCACAAGGATTCTTCCCGAAGGTTCCAGAT-----GGGGG--GACTTCTGTTTAGGGTCTGACGGATCACAGCTCACCTGTTTTATTACGAAGCATGACTGCTCACCAGGC---TC---TA---CTGCTGAACAGGACCTGTTCTGAATTCAGACTTGGCTAGTAAAAGCTCTATAATAAAAACAATTCTTTGATGTCAAATCCCAGCACATAAAATCCCAAAATATGCTTTTACTAAGGTGAACGAGTGAATGGTTTGGATTAACATGTGAACAGTTACAAATGTCAGAGGCTGGGAGGGATATTAACTCAACTGGAAATTTCACTCAAGCCAGGTGTCTGGTTTAAATTTGAAGAGTTGAATATATTAAATATGCTTTA-TTGAGGTGTCATGCATGAAATTGCATCCTTATGTATC-GGACAAACATCGGATGGATTTCCCAGAAGTTTGTGGGAGACCAAC-AGTCTTTTGGAGACACGGAGGAGAAGACCTTGTCTCCA-CCCCCC-TCATGCATAG-ACCTAGAGCCCGGCCAAGCCTGGGGACACCAAGTCCTAGGCAG-ATGCTGCCC--GTGGGGCTGCTGACACCCT----GGGCCAGC-GGGCTTTTCCA---CGGAGAATG------------------------GAAACGGCCTGGGCTGAAACTGCACAGGG-GCAGCAGAGTCAACAGGGCAGCTGCTCTCCCTGTGGGAAGCGAA-AG-AGCAACTCTTACTCT-CTCTGCAGAGGACATTTGGAGGGTTCTCCAGC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171776631 813 + 173848474 GCTGTCAT---------------------------GATC-CAGAAAAAAT---ATCTTCTGAGAAAGAAAATGAAAGCGAAAGTAATCAGAGGAAAGGCCAGATAAATTTCATTTGCGCAAAGCACAAGGATTCTTCCTGAAGGTTCCAGAT-----GGGGG--GACTTCTGTTTAGGGTCTGACGGATCACAGCTCACCTGTTTTATTACGAAGCATGACTGCTCACCAGGC---TC---TA---CTGCTGAACAGGACCTGTTCTGAATTCAGACTTGGCTAGTAAAAGCTCTATAATAAAAACAATTCTTTGATGTCAAATCCCAGCACATAAAATCCCAAAATATGCTTTTACTAAGGTGAACGAGTGAATGGTTTGGATTAACATGTGAACAGTTACAAATGTCAGAGGCTGGGAGGGATATTAACTCAACTGGAAATTTCACTCAAGCCAGGTGTCTGGTTTAAATTTGAAGAGTTGAATATATTAAATATGCTTTA-TTGAGGTGTCATGCATGAAATTGCATCCTTATGTATC-GGACAAACATCGGATGGATTTCCCAGAAGTTTGTGGGAGACCAAC-AGTCTTTTGGAGACACGGAGGAGAAGACCTTGTCTCCA-CCCCCC-TCATGCATAG-ACCTAGAGCCCGGCCAAGCCTGGGGACACCAAGTCCTAGGCAG-ATGCTGCCC--GTGGGGCTGCTGACACCCT----GGGCCAGC-GGGCTTTTCCA---CGGAGAATG------------------------GAAACGGCCTGGGCTGAAACTGCACAGGG-GCAGCAGAGTCAACAGGGCAGCTGCTCTCCCTGTGGGAAGCGAA-AG-AGCAACTCTTACTCT-CTCTGCAGAGGACATTTGGAGGGTTCTCCAGC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11458460 814 - 12463322 GCTGTCAT---------------------------GATC-CAGGAAAAAT---ATCTTCTGAGAAAGAAAATGAAAGCGAAAGTAATTGGAGGAAAGGCCAGATAAATTTCATTTGCACAAAGCACAAGGATTCTTCCCGAAGGTTCCAGAT-----GGGGG--GACTTCTGTTTAGGGTCTGACGGATCACAGCTCACCTGTTTTATTATGAAGCATGACTGCTCACCAGGC---TC---TA---CTGCTGAACAGGACCTGTTCTGAATTCAGACTTGGCTAGTAAAAGCTCTATAATAAAAACAATTCTTTGATGTCAAATCCCAGCACATAAAATCCCAAAATATGCTTTTACTAAGGTGAATGAGTGAATGGTTTGGATTAACATGTGAACAGTTACAAATGTCAGAGGCTGGGAGGGGTATTAACTCAACTGGAAATTTCACTCAAGCCAGGTGTCTGGTTTAAATTTGAAGAGTTGAATATATTAAATATGCTTTA-TTGAGCTGTCATGCATGAAATTGCATCCTTAAGTATC-GGACAAACATCGGATGGATTTCCCAGAAGTTTGTGGGAGACCGAC-TGTCTTTTGGAGACACGGAGGAGAAGACCTTGTCTCCACCCCCCC-TCATGCATAG-ACCTAGAGCTCGGCCAAGCCTGGGGACACCAAGTCCTAGGCAG-ATGCTGCCC--GTGGGGCTGCTGACACCCT----GGGCCAGC-GGGCTTTTCCA---TGGAGAATG------------------------GAAACGGCCTGGGCTGAAACTGCACAGGG-GCAGCAGAGTCAACAGGGCAGCTGCTCTCCCTGTGGAAAGCGAA-AG-AGCAACTCTTACTCT-GTCTGCAGAGGACATTTGGAGGGTTCTCCAGC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156285088 818 + 157873769 GCTGTCAT---------------------------GATC-CAGAAAAAAT---CTCTTCTGAGAAAGAAAATGAAAGCGAAAGTAATCGGAGGAAAGGCCAGATAAATTTCATTTGCACAAAGCACAGGGATGCTTCCCGAAGTTTCCAGATGGGGGGGGGG--GACTTCTGTTTAGGGTCTGACGGATCACAGCTCACCTGTTTTATTACAAAGCATGACTGCTCACCAGGC---TC---TG---CTGCTGAACACAACCTGTTCTGAATTCAGACTTGGCTAGTAAAAGCTCTATAATAAAAACAATTCTTTGATGTCCAATCCCGGCACATAAAATCCCAAAATATGCTTTTACTAAGGTGAACGAGTGAATGGTTTGGATTAACATGTGAACAGTTACAAATGTCAGAGGCTGGGAGGGATATTAACTCAACTGGAAATTTCACTCAAGCCAGGTGTCTGGTTTAAATTTGAGGAGTTGAATATATTAAATATGCTTTA-TCGAGCTGTCGTGCATGAAATTGCATCCTTATGTATT-GGACAAACATCGGATGGATTTCCCAGAAGTTTGTGGGAGACCGAC-AGTCTTTGGGAGACGTGGAGGAGAAGACCTTGTCTCAG-CCCCCC-TCGTGCATAG-ACCTAGAGCCCGGCCAAGCCTGGGGACAGCAAGTCCTAGGCAG-ATGCTGCCC--CTGGGGCGGCTGACACCCT----GGGCCAGC-GGGCTCTTCCA---CGGAGAATG------------------------GAAACGGCCTGGGCTGAAACTGCCCAGGG-GCAGCAGAGTCAACCGGGCAGCTGCTCTCCCTGTGGGAAGCGAA-AG-AGCAACTCTTACCCT-CTCTGCAGAGGACATTTGGAGGGTTCTCCAGC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170312002 810 + 172585720 GCTGTCAT---------------------------GATC-CAGAAAAAGT---CTCCTCTGAGAAAGAAAATGAAAGCGAAAGTAATAGGAGGAAAGGCCAGATGAGTTTCATTGGCACAAAGCACAGGGATTCTTCCCAAAGGCTCCAGAT-----GGGGG--GACCTTGGTTTAGGGCCTGACGGATCACAGCTCACCTGTTTTATTACGAAGCATGACTGCTCACCAGGC---TC---TG---CTGCTGAACACGGCCTGTTCTGAATTCAGACTTGGCTAGTAAAAGCTCTATAATAAAAACAATTCTTTGATGTCCAATCCCAGCACATAAAATCCCAAAATACGCTTTTACTAAGGTGAACGAGTGAATGGTTTGGGTTAACATGTGAACAGTTACAAATGTCAGAGGCTGGGAGGGATATTAACTCAACTGGAAATTTCACTCAAGCCAGGTGTCTGGTTTAAATTTGAGGAGTTGAATATATTAAATATGCTTTA-TTGAGCTGTCATGCATGAAATTGCATCCTTATGTATC-GGACAAACATCAGATGGATTTCCCAGAAGTTTGTGGGAGACCGAC-GGTCTTTTGGAGATGCGG---AGAAGACCTTGTCTCAA-CCACCC-TCGTGCATAG-ACCTAGACCCCGGCCAAGCCTGGGGACACCAAGTCCTAGGCAG-ATGCTGCCC--ACGGGGCTGCCGACACCCT----GGGCCCGT-GGGCTCTTCCA---CGGAGAATG------------------------GAAACAGTCTGGGCTGAAACTGCACAAGG-ACAGCAGAGTCAACAGGGCAGCTGCTCTCTCTGCGGGAAGCGAA-AG-AGCAACTCTTACTCT-CTCTGCAGAGGACATTTGGAGGGTTCTCCAGC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169057840 810 - 170955103 GCTGTCAT---------------------------GATC-CAGAAAAAGT---CTCCTCTGAGAAAGAAAATGAAAGCGAAAGTAATAGGAGGAAAGGCCAGATGAGTTTCATTGGCACAAAGCACAGGGATTCTTCCCGAAGTCTCCAGAT-----GGGGG--GACCTCGGTTTAGGGCCTGACGGATCACAGCTCACCTGTTTTATTACGAAGCATGACTGCTCACCAGGC---TC---TG---CTGCTGAACACGGCCTGTTCTGAATTCAGACTTGGCTAGTAAAAGCTCTATAATAAAAACAATTCTTTGATGTCCAATCCCAGCACATAAAATCCCAAAATACGCTTTTACTAAGGTGAACGAGTGAATGGTTTGGGTTAACATGTGAACAGTTACAAATGTCAGAGGCTGGGAGGGATATTAACTCAACTGGAAATTTCACTCAAGCCAGGTGTCTGGTTTAAATTTGAGGAGTTGAATATATTAAATATGCTTTA-TTGAGCTGTCATGCATGAAATTGCATCCTTATGTATC-GGACAAACATCAGATGGATTTCCCAGAAGTTTGTGGGAGACCGAC-GGTCTTTTGGAGATGCGG---AGAAGACCTTGTCTCAA-CCCCCC-TCGTGCATAG-ACCTAGACCCCGGCCAAGCCTGGGGACACCAAGTCCTAGGCAG-ATGCTGCCC--ACGGGGCTGCCGACACCCT----GGGCCCGT-GGGCTCTTCCA---CGGAGAATG------------------------GAAACGGTCTGGGCTGAAACTGCACAAGG-ACAGCAGAGTCAACAGGGCAGCTGCTCTCTCTGCGGGAAGCGAA-AG-AGCAACTCTTACTCT-CTCTGCAGAGGACATTTGGAGGGTTCTCCAGC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8344537 810 + 10161646 GCTGTCAT---------------------------GATC-CAGAAAAAGT---CTCCTCTGAGAAAGAAAATGAAAGCGAAAGTAACAGGAGGAAAGGCCAGATGAGTTTCATTGGCACAAAGCACAGGGATTCTTCCCGAAGGCTCCAGAT-----GGGGG--GACCTCGGTTTAGGGCCTGACGGATCACAGCTCACCTGTTTTATTACGAAGCATGACTGCTCACCAGGC---TC---TG---CTGCTGAACACGGCCTGTTCTGAATTCAGACTTGGCTAGTAAAAGCTCTATAATAAAAACAATTCTTTGATGTCCAATCCCAGCACATAAAATCCCAAAATACGCTTTTACTAAGGTGAACGAGTGAATGGTTTGGGTTAACATGTGAACAGTTACAAATGTCAGAGGCTGGGAGGGATATTAACTCAACTGGAAATTTCACTCAAGCCAGGTGTCTGGTTTAAATTTGAGGAGTTGAATATATTAAATATGCTTTA-TTGAGCTGTCTTGCATGAAATTGCATCCTTACGTATC-GGACAAACATCAGATGGATTTCCCAGAAGTTTGTGGGAGACCGAC-GGTCTTTTGGAGATGCGG---AGAAGACCTTGTCTCAA-CCCCCC-TCGTGCATAG-ACCTAGACCCCGGCCAAGCCTGGGGACACCAAGTCCTAGGCAG-ATGCTGCCC--ATGGGGCTGCCGACACCCT----GGGCCCGT-GGGCTCTTCCA---CGGAGAATG------------------------GAAACGGTCTGGGCTGAAACTGCACAGGG-ACAGCAGAGTCAACAGGGCAGCTGCTCTCTCTGCGGGAAGCGAA-AG-AGCAACTCTTACTCT-CTCTGCAGAGGACATTTGGAGGGTTCTCCAGC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1375228 813 + 3144229 GCTGTCAA---------------------------GATC-CAGAAAAAAT---CTCCTCTGAGAAAGAAAATGAAAGCGAAAGTAATAGGAGGAAAGGCCAGATGAGTTTCATTTGCACAAAGCACAGGGATTCTTCCCGAAGGCTCCAGAT-----GGGGG--GACTTCGGTTTAGGGCCTGACGGATCACAGCTCACCTGTTTTATTACGAAGCATGACTGCTCACCAGGC---TC---TG---CTGCTGAACACGGCCTGTTCTGAATTCAGACTTGGCTAGTAAAAGCTCTATAATAAAAACAATTCTTTGATGTCCAATCCCAGCACATAAAATCCCAAAATACGCTTTTACTAAGGTGAACGAGTGAATGGTTTGGGTTAACATGTGAACAGTTACAAATGTCAGAGGCTGGGAGGGATATTAACTCAACTGGAAATTTCACTCAAGCCAGGTGTCTGGTTTAAATTTGAGGAGTTGAATATATTAAATATGCTTTA-TTGAGCTGTCATGCATGAAATTGCCTCCTTATGTATC-GGACAAACATCAGATGGATTTCCCAGAAGTTTGTGGGAGACCGAC-GGTCTTTTGGAGATGCGGAGAAGAAGACCTTGTCTCAA-CCCCCC-TCGTGCATAG-ACCTAGACCCCGGCCAAGCCTGGGGACACCAAGTCCTAGGCAG-ATGCTGCCC--ACGGGGCTGCCGACACCCT----GGGCCCGT-GGGCTCTTCCA---CGGAGAATG------------------------GAAACGGTCTGGGCTGAAACTGCACAGGG-ACAGCAGAGTCAACAGGGGAGCTGCTCTCCCTGCGGGAAGCGAA-AG-AGCAACTCTTACTCT-CTCTGCAGAGGACATTTGGAGGGTTCTCCAGC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96653559 813 + 98384682 GCTGTCAA---------------------------GATC-CAGAAAAAAT---CTCCTCTGAGAAAGAAAATGAAAGCGAAAGTAATAGGAGGAAAGGCCAGATGAGTTTCATTTGCACAAAGCACAGGGATTCTTCCCGAAGGCTCTAGAT-----GGGGG--GACCTCGGTTTAGGGCCTGACGGATCACAGCTCACCTGTTTTATTACGAAGCATGACTGCTCACCAGGC---TC---TG---CTGCTGAACACAGCCTGTTCTGAATTCAGACTTGGCTAGTAAAAGCTCTGTAATAAAAACAATTCTTTGATGTCCAATCCCAGCACATAAAATCCCAAAATACGCTTTTACTAAGGTGCACGAGTGAATGGTTTGGGTTAACATGTGAACAGTTACAAATGTCAGAGGCTGGGAGGGATATTAACTCAACTGGAAATTTCACTCAAGCCAGGTGTCTGGTTTAAATTTGAGGAGTTGAATATATTAAATAAGCTTTA-TTGAGCTGTCATGCATGAAATTGCATCCTTATGTATC-AGACAAACATCAGATGGATTTCCCAGAAGTTTGTGGGAGTCCGAC-GGTCTTTTGGAGATGCGGAGAAGAAGACCTTGTCTCAA-CCCCCC-TCGTGCATAG-ACCTAGACCCCGGCCAAGCCTGGAGACACCAAGTCCTAGGCAG-ATACTGCCC--ACGGGGCTGCTGACACCCT----GGGCCCGT-GGGCTCTTCCA---TGGAGAATG------------------------GAAACGGTCTGGGCTGAAACTGCACAGGG-ACAGCAGAGTCAACAGGGCAGCTGCTCTCCCTGCGGGAAGCGAA-AG-AGCAACTCTTACTCT-CTCTGCAGAGGACATTTGGAGAGGTCTCCAGC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8198496 813 - 10857215 GCTGTCAA---------------------------GATC-CAGAAAAAAT---CTCCTCTGAgaaagaaaatgaaagtgaaagtaataggaggaaaggCCAGATGAGTTTCATTTGCACAAAGCACAGGGATTCTTCCCGAAGGCTCCAGAT-----GGGGG--GACTTCTGTTTAGGGCCTGACGGATCACAGCTCACCTGTTTTATTACGAAGCATGACTGCTCACCAGGC---TC---TG---CTGCTGAACACGGCCTGTTCTGAATTCAGACTTGGCTAGTAAAAGCTCTATAATAAAAACAATTCTTTGATGTCCAATCCCAGCACATAAAATCCCAAAATACGCTTTTGCTAAGGTGAACGAGTGAATGGTTTGGGTTTACATGTGAACAGTTACAAATGTCAGAGGCTGGGAGGGATATTAACTCAACTGGAAATTTCACTCAAGCCAGGTGTCTGGTTTAAATTTGAGGAGTTGAATATATTAAATATGCTTTA-TTGAGCTGTCATGCATGAAATTGCCTCCTTATGTATC-GGACAAACATCAGATGGATTTCCCAGAAGTTTGTGGGAGACCGAT-GGTCTTTTGGAGATGCGGAGAAGAAGACCTTGTCTCAA-CCCCCC-TCGTGCATAG-ACCTAGACCCCGGCCAAGCCTGGGGACACCAAGTCCTAGGCAG-ATACTGCCC--ACGGGGCTGCCGACACCCT----GGGCCCGT-GGGCCCTTCCA---CGGAGAATG------------------------GAAACGGTCTGGGCTGAAACTGCACAGGG-ACAGCAGAGTCAACAGGGCAGCTGCTCTCCCTGCGGGAAGCGAA-AG-AGCAACTCTTACTCT-CTCTGCAGAGGACATTTGGAGGGTTCTCCAGC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15592558 813 - 23502949 GCTGTCAT---------------------------GATC-CAGAAAAAAT---ATCCTCTGAGAAAGAAAATGAAAGCGAAAGTAATCGGAGGAAAGGCCAGATGAGTTTCATTTGCACAAAGCACAGGGATTCTTCCCGAAGGCTCCAGAT-----GGGGG--GACTTCGGTTTAGGGTCTGACGGATCACAGCTCACCTGTTTTATTATGAAGCATGACTGCTCACCAGGC---TC---TG---CTGCTGAACATGGCCTGTTCTGAATTCAGACTTGGCTAGTAAAGGCTCTGTAATAAAAACAATTCTTTGATGTCCAATCCCAGCACATAAAATCCCAAAATACGCTTTTACTAAGGTGAACGAGTGAATGGTTTGGGTTAACATGTGAACAGTTACAAATGTCAGAGGCTGGGAGGGATATTAACTCAACTGGAAATTTCACTCAAGCCAGGTGTCTGGTTTAAATTTGAGGAGTTGAATATATTAAATATGCTTTA-TTGAGCTGTCATGCATGAAATTGCATCCTTATGTATC-GAACAAACATCAGATGGATTTCCCAGAGGTTTGTGGGAGACCGAC-GGTCTTTTGGAGATGTGGAGAAGAAGACCTTGTCTCAA-CCCCCC-TCGTGCATAG-ACCTAGAGCCCAGCCAAGCCTGGGGACACCAAGTCCTAGGCAG-ATACTGCCC--ACGGGGCTGCCGACACCCT----GGGCCTGT-GGGCTCTTCCA---CGGAGAACG------------------------GAAACGATCTGGGCTGAAACTGCACAGGG-ACAGCAGAGTCAACAGGGCAGCTGCTCTCCCTGCGGGAAGCGAA-AG-AGCAACTCTTACTCT-CTCTGCAGAGGACATTTGGAGGGTTCTCCAGC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169862322 839 + 171630274 GCCGTCATGATCCGGAAAATATCTCTTTTGAGAAAGACC-CAGAAAAAAC---ATCTTCTGAGAAAGAAAACGAAAGCAAAAGTAATCGGGGGAAAGGCAAGATAAATTTCATTTGCACAAAGCACAGGGACT-TTTCCGAAGGTTCCAGAT---TGGGGGG--GACTTGGGTTTAGGGTCTGATGGATCACAGCTCACCTGTTTTATTACGGAGCATGACTGCTCACCAGGC---TC---TG---CTGCTGAACGCTGTCTGTTCTGAATTCAGACTTGGCCAGTTAAAGCTCTATAATAAAAACAATTCTTTGATGTCCAATCCCAGCACATAAAATCCCAAACTATGCTTTTACTAAGGTGAATGAGCAAATGGTTTGGGTTAACATGTGAACAGTTACAAATGTCAGAGGCTGGGAGGGATATTAACTCAACTGGAAATTTCACTCAAGCCAGGTGTCTGGTTTAAATTTGAGGAGCTGAATATATTAAATATGCTTTA-TTGAGCTGTCATGCGTGAAATTGCATCCTTATGTATC-GGACAGATCTTGCATGGGTTTCCCAGAAGCTTGTGGGAGACCGAC-GGTCTTTTGGAGACACGGAGGAGAAAACCTTGTCTCAA-CCGCCC-TCATGCACGG-ACCTAGAGCCCAGCCACG-CCAGGGACACCAAGTCCTA-GTGG-ACCCTGCCC--ATGGGGCCGCCGACACCCT----GGGCCAGC-GGGCTCTTCCA---TGGAGGATG------------------------GAAACGCTCTCGGCTGAAACTGCACACGG-GCAGCAAAGTCAACAGGGCAGCTGCTCTCCCCGCGGGGAGGGAA-AG-AGCCACTCTTACTCT-CTCTGCAGAGGACATTTGGACGGTCCTCCAGC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1275590 800 - 2905041 GCTGTCAT---------------------------GACC-CAGAAAAAAT---GTCTTCTG----AGAAAACAAAAGCAAAAGTAATTGGGGGAAAGGCAAGATAAATTTCATTTGCACAAAGTACAGGGACT-TTTCCGAAGGTTCCAGAC-----GGGGG--GACTTGGGTTTAGGGTCCGATGGGTCACAGCTCACCTGTTTTATTACGGAGCATGACTGCTCACCAGGC---TT---TG---CTGCTGAATGCTGTCTGTTCTGAATTCAGACTTGGCCAGTTAAAGCTCTATAATAAAAACAATTCTTTGATGTCCAATCCCAGCACATAAAATCCCAAAATATGCTTTTACTAAGGTGAACGAGTGAATGGTTTGGGTTAACATGTGAACAGTTACAAATGTCAGAGGCTGGGAGGGATATT-----AACTGGAAATTTCACTCAAGCCAGGTGTCTGGTTTAAATTTGAGGAGCTGAATATATTAAATATGCTTTA-TTGAGCTGTCATGCGTGAAATTGCATCCTTATGTATC-GGACAGACATTGCATGGGTTTTCCAGAAGCTTGTGGGAGACCAAC-GGTCTTTTGGAGACACGGAGGAGAAGATCTTGTCTCAA-CCGCCC-TCATGCACAG-ACCTAGAGCCCGGCCACGCCCAGGGACACCAAGTCCTA-GTGG-ACACTGCCC--ATGGGGCCGCCGACACCCT----GGGCCGGC-GGGCTCTTCCA---TGGAGGATG------------------------GAAA--GTCTGGGCTGAAACTGCACACGG-ACAGCAGAGTCAACAGGGCAGCTGCTCTCCCTGCAGGGAGGGAA-AT-GACCACTCTTACTCT-GTCTGCGGAGGACATTTGGAGGGTCCTCCAGC i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1232356 807 - 2164891 GCTGTCAT---------------------------GACT-CAGAAAAAAT---ATCTTCCGAGAAAGAAAACAAAAGC-AAAGTAATCGGGGGAAAGGCAAGATACATTTCATGTGCACAAAGCGCAGGGACT-TTTCCGAAGGTTCCAGAT------GGGG--GACTTGGGCTTAGGATCTGATGGATCACAGCTCACCTGTTTTATTACGGAGCATGATTGCTCACCAGGC---TC---TG---CTGCTGAATGCTGTCTGTTCTGAATTCAGACTTGGCCATTTAAAGCTCTATAATAAAAACAATTCTTTGATGTCCAATCCCAGCACATAAAATCCCAAAATATGCTTTTACTAAGGTGAATGAGTGAATGGTTTGGGTTAACATGTGAACAGTTACAAATGTCAGAGGCTGGGAGGGATATTAACTCAACTGGAAATTTCGCTCAAGCCAGGTGTCTGGTTTAAATTTGAGGAGCTGAATATATTAAATATGCTTTA-TTGAGCTGTCATGCGTGAAATTGCATCCTTATGTATC-GGACAGACATTGCATGGGTTTCCCAGAAGCTTGTGGGAGACTGAA-AGTCTTTTGGAGACACGGAGGAGAAGATCTTGTCTCAA-CCGCCC-TCATGCACAG-ACCTAGAGCCCAGCCACGCCCAGTGACACCAAGTCCTG-GTCG-ACACTGCCC--ATGGGGCCGCCAACACCCT----GGGCCGGT-GGGCTGTTCCA---TGGAGGATG------------------------GAAA--GTCTGGGCTGAAACTGCACACGA-GCAGCAGAGTCAACAGGGCAGCTGCTCTCCCTGCGGGGAGGGAA-AG-AGCCACTCTTACTCT-CTCTGCAGAGGACATTTGGAGAGTCTTCCAGC i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1486197 800 - 1813869 GCTGCCAT---------------------------GATC-CGGAAAAAATCTCATCTTCTGAGAAAGAAAACGAAAGCAAAAGCGATCAGGGGAAAGGCAAGATAAATTTCATTTGCACAAAGCACAGGGAC--TTTCCGAAGGTTCCAGAT-----GGGGG--CACTTGGGTTTAGGGTCTGATGGATCACAGCTCACCTGTTTTATTACGGAGCATGACTGCTCACCAGGC---TC---TG---CTGCTGAACGCTGTCTGTTCTGAATTCAGACTTGGCCAGTTAAAGCTCTATAATAAAAACAATTCTTTGATGTCCAATCCCAGCACATAAAATCCCAAAATATGCTTTTACTAAGGTGAATGAGTGAATGGTTTGGGTTAACATGTGAACAGTTACAAATGTCAGAGGCTGGGAGGGATATTAACTCAACTGGAAATTTCACTCAAGCCAGGTGTCTGGTTTAAATTTGAGGAGTTGAATATATTAAATATGCTTTA-TTGAGCTGTCATGCGTGAAATTGTATCCTTATGTATG-GGACAGACATTGCATGGGTTTCCCAGAAGCTTGTGGGAGACCGAC-GGTCTTTTGGAGACATGGAGGAGAAGACCTTGTCTCAA-CCGC---------------CCTAGAGACCGGCCACGCCCAGGGACACCAAGTCCTA-GTGG-ACACTGCCC--ACGGGGCCGCCGACACCCT----GGGCCGGC-GGGCTCTTCCA---TGGAGGATG------------------------GAAATGGTCTGGGCTGAAACTGCACACCG-GCAGCAGAGTCAGCAGGGCAGCTGCTCTCCCTGCGGGGAGGGAA-AG-AGCCACTCTTACTCT-CTCTGCAGAGGACATCTGGAGGCTCCTCCAGC i aotNan1.NW_018494782v1 I 20 C 0 s otoGar3.GL873575 10936359 801 - 12073884 GCTG--GG---------------------------GGAT-GAGGGAGAAT---CACTTCTGAGAAGGAAGCTGAAAGTGAAAGTGAGTTGGGGAAAGGCGAGAGGAGTTT-GTCTGCGCAGAGC---------------------TCCAAGC-----AGGGA--GACTTCAATTTGGAGCCTGGCAGGTCACA-CTCACCTGTCTCATTCTTCCGGCTAACTGCCC-CCAGAC---GT---GGTCCCTGCCAAGTGAGGCTTGCTGTGCACTCAGGCTTGGCTAGTAAAAGCTCTGTAATAAAAACAATTCTTTGATGTCCAATCCCAGCACATAAAATCCCCAAATGTGCTTTTACTAAGGTGAGTGAGTGGCTGGTGTGGGTTAGTGAGTGAGCAGTTACACGTGTCAGAGGCCTGGGGGGATATAAACTGAATTGGAAATTCCAC-CAGGCCAGGTGTCTGGTTCAAATTTGAAGAATTGAATATATTAAATATGCTTTA-TTGAGCTGTCAGGCATAAAATTGCATCCTTATGTATC-TGAACAACACTGGGTAATTTCCCCAGGAGTTTGTAGGAGACTGAT-AGTCTTGTGGGGGTACGGAGGAGGAGAC--TCTCTCAA-TATCCA-TGAAGCTCAG-TCCCGGAGCCTCGACTTGCCTGGCAA-GCTGGGGCCCAGGCTG-ATAGCACCT--GGCACGACGTCCACACACT----GGGCCAACAGGGCTCTCACAGTGGGGAAAATG---------CTCAGTCTCCA--CTGAGCACGTTTGAGTCAAGTCTGCACACTG-GTGACTGAGTGGCCAGAGCAGCCGCCCCTGCTGCGTGAGGGAAG-GC-GGCCTCTCCT-CTGT-CTCTGCAAAGGGCA-CTGCGGGACCCTCCGGC i otoGar3.GL873575 I 2 C 0 s canFam3.chr1 56159960 802 + 122678785 GCTGT-GT---------------------------GAT----GGGGAAGT---CACTTCTGAGAGAGAAAAAGAAAGGAAAAGTAATCTGAGCAAAGGAAATACACATGTCATGTGC-TAAACGACCAGGATGCTTCCTAAAAGTCCCAGAG-----GGGGGAAGATTTCAATTTAGAATCTGATGGATCCCAGCTCACCTGTTTTATTACTGAGCAC-ACTGCTGGCCAGATCCATT---TG---CTGCTGAGCTAGGTCTGTTCTAAATTCAGACTTGGCTAGTAAAAGTTCTACAATAAAAGCGATTCTTTGATGTCCAATCCCAGCACATAAAATCCAAAAATATGCTTTTACTAAGGTGAATGAGTGAGTGGTTTGGGTTAGCATGTGAACAGTTACAAATGTCAGTGGCTTGGAGGGATAGAAACTCAACTGGAAATTTCACTCAAGCCAGGTGTCTGGTTTAAATTTGGAGAAAAGAATATATTAAATACGCTTTA-TTGAGCTGTCATGCATGAAATTGCAT-CTCACATACCTGGAAACACACTGCATCTTTTTCTCAGAAACTGGTAGGATCCCAGTGGGTTTTTTGGGGAGAGGTGAGGAAAGTTCTTGCCTGGC-ACCCTG-TCGTATGGAG--TCGGGAGCCATGTACAGCCTGAGGGCACTGGGTTCAAGGCTGCAGGCAGCCC-AATGTGGCTGTCGACACACTTGCGTGGACCGT-GGCCATCATCA---CTGAG--TC------------------------AAGGCCACGAAGCCTGA--------------CCACCAAGTCATCAGAATAGCTACTTTTCATGTGTGAACAGAA-GGAAGTGAGGTGTTCTTT-CCCTGCAGAGGAAA--CAGAGTGGTTTCCCGC i canFam3.chr1 I 2 C 0 s dasNov3.JH569188 541635 834 + 760995 ATTGGCGT---------------------------GACTGAAGGAAAAAT---CACTTCTGAGAAAGAAAATGAATGTGAAAGGAACCTGAGGAAAAGAAAGATAAATTGCATTTGCAAA--------------TGCCTTAGAGTTCCAAAT--TCGGGGAA--GATTTCAATTTAGAATCTGATAGATCACAACTCACCTGTTTTATTACTAAGCTTAACTGCTCACTAGAC---TCATTTG---TTGTTGAGCAAGGTCTGTTATGAATTCAGACTTGGCCAGTAAAAGCTCTATAATAAAAACAATTCTTTGATGTCCAATCCCAGCACATAAAATCCCAAAATATGCTTTTACTAAGGTGAGTGAGTGAATGGTTTGGGTTAACATGTGAGCAGTTACAAATGTCAGAGACTTGGA-GGATATAAACTCAATTGGAAATTTCACTCAGGCCAGGTATCTGGtttaaat---aaaaaatgaatatattaaatatGCTATGTTTGCGCTGTCATGCATGAAATTGCCTCCTTACCTATT-TGAAAAATATTGCAGCATTTTCTCAGTAGTTTGTAGTGTTCCAGT-TGTCTTTCTGGGGCTAAGAAGAGCAGTCTTTATCTCAG-TATCCCATCCTACATAGTTCCAAGAGCCATATCAAGTCTGAGGAAAATGGGTTCTC-ACTC-ATGGTAACCTGATATGCTTGTCAGCAAACC----AGGCCGGTTTGGCTCTTTCA---AGATAGATGAGTCCTGGCCACCATCTCTAGGCCAACAAGTTCTGAATCAACACTACTCATGGAGCAATCAAGCCAAGAGAGTAGCTTCTCATCTTGTATGTAGGAAAGAA-AGCCAATCTTCCTTTACTCTTCAAGCAAATTTTGATGGATTCTCCTGC i dasNov3.JH569188 I 8 I 22 a score=1704681.000000 s hg38.chr6_KB021644v2_alt 86870 194 + 185823 TGCAGCCATCACTCTTCTCTCTATTCCCGAAACAGGGAGCCCCACT-GCTGGGAAGAGACAAACACAGGTGCTGTGTGGAGTGGCATGGCAGATAGAA-TTGAACCATACACATCGGGATT--ATGACACTTTTGCCTTTTAAGATTGATATTTTTAAATCAAAATTTAAGCTACAGAATAGA---CAACAAAATATTTTG s panTro5.chr6 173538794 194 + 175400573 TGCAGCCATCACTCTTCTCTCTATTCCCGAAACAGGGAGCCCCACT-GCTGGAAAGAGACAAACACAGGTGCTGTGTGGAGTGGCATGGCAGATAGAA-TTGAACCATACACATCGGGATT--ATGACACTTTTGCCTTTTAAGATTGATATTTTTAAATCAAAATTTAAGCTACAGAATAGA---CAACAAAATATTTTG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171777444 194 + 173848474 TGCAGCCATCACTCTTCTCTCTATTCCCGAAACAGGGAGCCCCACT-GCTGGAAAGAGACAAACACAGGTGCTGTGTGGAGTGGCATGGCAGATAGAA-TTGAACCATACACATCGGGATT--ATGACACTTTTGCCTTTTAAGATTGATATTTTTAAATCAAAATTTAAGCTACAGAATAGA---CAACAAAATATTTTG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11459274 194 - 12463322 TGCAGCCATCACTCTTCTCTCTATTCCCGAAACAGGGAGCCCCACT-GCTGGAAAGAGACAAACACAGGTGCTGTGTGGAGTGGCATGGCAGATAGAA-TCGAACCACACACATCGGGATT--ATGACACTTTTGCCTTTTAAGATTGATATTTTTAAATCAAAATTTAAGCTACAGAATAGA---CAACAAAATATTTTG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156285906 195 + 157873769 TGCAGCCATCGCTCGTCTCTCTATTCCCGAAGCAGGGAGCCCCACTGGCTGGAAAGAGACAAACACAGGTGCTGTGTGGAGTGGCATGGCAGATAGAA-TCGAACCGTACACAACGGGAGT--ATGACACGTTTGCCTTTTAAGATTGATATTTTTAAATCAAAATTTAAGCTACAGAATAGA---CAACAAAATATTTTG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170312812 195 + 172585720 TACAGCCATCACTCTTCTCTCTATTCCTGAAACAGGGAGTCCCACTGGCTGGAAAGAGACAAACACAAGGGCTGTGTGGAGTGGCAGGGCAGACAGCA-TCGAACCGTACGCATCGGGAGT--ATGACACTTTTGCCGTTTGAGACTGGTATTTTTAAATCAAAATTTAAGCTGCAGAATAGA---CAACAAAATATTTTG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169058650 195 - 170955103 TACAGCCATCACTCTTCTCTCTATTCCTGAAACAGGGAGTCCCACTGGCTGGAAAGAGACAAACACAAGGGCTGTGTGGAGTGGCAGGGCAGACAGCA-TCGAACCGTACGCATCGGGAAT--ATGATACTTTTGCCGTTTGAGACTGGTATTTTTAAATCAAAATTTAAGCTGCAGAATAGA---CAACAAAATATTTTG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8345347 192 + 10161646 TACAGCCATCACTCTT---TCTATTCCTGAAACAGGGAGTCCCACTGGCTGGAAAGAGACAAACACAAGGGCTGTGCGGAGTGGCAGGGCAGACAGCA-TCGAACCGTATGCATCGGGAAT--ATGATACTTTTGCCGTTTAAGACTGGTATTTTTAAATCAAAATTTAAGCTACAGAATAGA---CAACAAAATATTTTG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1376041 194 + 3144229 TGCAGCCATCACGCTTCTCTCTATTCCTGAAACAGGGAGTCCCACTGGCTGGAAAGAGACAAACACAGGGGCTGTGCGGAGTGGCATGGCAGACAGCA-TCGAACCATATGCATCGCGATT--ATGATACTTTTGCTGTTTAAGACTGGTATTTTTAAATCAAAATTTAAGCTACAGAATAGA---C-ACAAAATATTTTG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96654372 194 + 98384682 TGTAGCCATCACGCTTCTCTCTATTCCTGAAACAGGGAGTCCCACTGGCTGGAAAGAGACAAACACGGGAGCTGTGTGGAGTGGCATGGCAGACAGCA-TTGAATCATAGGCATCGCGATT--ATGATACTTTTGCCGTTTAAGACTGGTATTTTTAAATCAAAATTTAAGCTACAGAATAGA---C-ACAAAATATTTTG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8199309 194 - 10857215 TGCAGCCATCACGCTTCTCTCTATTCCTGAAACAGGGAGTCCCACTGGCTGGAAAGAGACAAACACAGGGGCTGTGCGGAGTGGCATGGCAGACAGCA-TCGAACCATATGCATCGCGATT--ATGATACTTTTGCTGTTTAAGACTGGTATTTTTCAATCAAAATTTAAGCTACAGAATAGA---C-ACAAAATATTTTG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15593371 194 - 23502949 TGCAGCCATCACCCTTCTCTCTATTCCTGAAACAGGGAGTCCCGCTGGCTGGAAAGAGACAAACACAGAGGCTGTGTGGAGTGGCATGGCAGATAGCC-TCGAACCATGTGCATCGGGATT--ATGATACGTTTGCCGTTTAAGATTGATATTTTTAAATC-AAATTTAAGCTACAGAATAGA---CAACAAAATATTGTG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169863161 192 + 171630274 TGCAGCCATCATCCTTCTCTCTATTCCCGAAACAGGGAGCCCCGCTGCCTGA-AAGAAAC-AACAC--GTGCTGTGTGGAGT-GCATTGCAGGTGGAA-TCAAATGATACACGCTGGGATTACATGACACTTTTACCTTTTAAGATTGATATTCTTTAAACAGAATTTCAGCTACAGAATAGG---CAACGAAATATTTGG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1276390 193 - 2905041 TGCAGCCACCATCCTTCTGTCTACTCCCGAAACAGGGAGCACCTCTGTCTGG-AAAAAACAAACAC--GTGCCGTGTGGAGT-GCATTGCAGGTGGAA-TCAAACGATACACACTGGGATTATATGATGCTTTTGCCTTTTAAGATTGATATTCTTTAAACAGAATTTAAGTTACATAATAGA---CAACGAAATACTTGG i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1233163 194 - 2164891 TGCAGCCATCATCCTTCTGTCTACTGCCAAAACAGGGAGCCCCGCTGTCTGGAAAGAAACAAGCAC--GTGCTGTGTGGAGT-GCATTGCAGGTGGAA-TCAAACGATACACACTGGGATTATATGACACTTTTGCCTTTTAAGATTGATATTCTTTAAACAGAATTTAAACTACAGAATAGG---CAACGAAATATTTGG i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1486997 194 - 1813869 TGCAGCCATCATCCTTCTCTCTATTCCCGAAACAGGGAGCCCCGCTGTCTGGAAAGAAACGAACAC--GTGCTGTGTGGAGT-GCCCTGCAGGTGGAA-TTAAACGATACACACTGGGATTATATGACACTTTTGCCTTTTAAGATTGATATTCTTTAAACAGAATTTAAGCTACAGAATAGG---CAACGAAATATTTGG i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10937160 175 - 12073884 TACAGCCATCACGGCCC--------CCCAAAACAGG--ACCCCACT----GGAGCCAAAGGGGTGTGTGTGCTGGGAGCAGTGGCACAGCCAACAGGC-ACGTGTGATAG----TGTGACT--GTTGCACTTCAGCCTTGTGAGATTTAGTTTTTT-----AAAAATTAAGCTACAGAATAGAATTTGAACAAATTCACCA i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56160762 186 + 122678785 CACGGCCGCCACTCCTCTGTCTCCGC-----ACAGGAAACTCCAATGATTTAAAAGAAACGAATGCATGCTTTGTGATGAGGAACTTAATGAAGAAAAGTCCAAAGATGTAT-----GGTT--GTGACAATTTTGCCTTTTGAGATTGATTAAAAAAAAAAAAAAAAAGAGTTACAGAATGTA---AAACAGTACCTGCAA i canFam3.chr1 C 0 C 0 e dasNov3.JH569188 542469 22 + 760995 I a score=726233.000000 s hg38.chr6_KB021644v2_alt 87064 82 + 185823 AGAAAC-AGCATTATCGAAG---ATCTATTTGATGT-ATT-----AATTTATGAAATTCCATAGGAATCACCTTTTCTGCAAATA--CTCTCTC s panTro5.chr6 173538988 82 + 175400573 AGAAAC-AGCATTATCGAAG---ATCTATTTGATGT-ATT-----AATTTATGAAATTCCATAGGAATCACCTTTTCTGCAAATA--CTCTCTC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171777638 82 + 173848474 AGAAAC-AGCATTATCGAAG---ATCTATTTGATGT-ATT-----AATTTATGAAATTCCATAGGAATCACCTTTTCTGCAAATA--CTCTCTC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11459468 82 - 12463322 AGAAAC-AGCATTATTGAAG---ATCTATTTGATGT-ATT-----AATTTATGAAATTCCATAGGAATCACCTTTTATGCAAATA--CTCTCTC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156286101 67 + 157873769 AGAAA-------TGTTGAA------------GATGT-ATT-----AATTTATGAAATTCCATAGGAATCACCTTTTCTGCAAATA--CTCTCTC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170313007 78 + 172585720 AGAAAC-AGCATTATTAAAG---ATCC----GATAT-ATT-----AATCTGTGAAATTCCACAGGAATCACCATTTCTGCAAATA--TTCTCTC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169058845 78 - 170955103 AGAAAC-AGCATTATTAAAG---ATCC----GATAT-ATT-----AATCTGTGAAATTCCACAGGAATCACCATTTCTGCAAATA--TTCTCTC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8345539 78 + 10161646 AGAAAC-AGCATTATTAAAG---ATCC----GATAT-ATT-----AATCTGTGAAATTCCACAGGAATCACCATTTCTGCAAATA--TTCTCTC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1376235 78 + 3144229 AGAAAC-AGCATTATTAAAG---ATCT----GATAT-ATT-----AATTTATGAAATTCCACAGGAATCACCATTTCTGCAAATA--CTCTCTC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96654566 78 + 98384682 AGAAAC-AGCATTATGAAAG---ATCT----GATAT-ATT-----AATTTATGAAATTCCACAGGAATCACCATTTCTGCGAATA--CTCTCTC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8199503 78 - 10857215 AGAAAC-AGCATTATTAAAG---ATCT----GATAT-ATT-----AATTTATGAAATTCCACAGGAATCACCATTTCTGCAAATA--CTCTCTC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15593565 78 - 23502949 AGAAAC-AGCACTATGGAAG---ATCC----GATAC-ATT-----AATTTATGAAATTCCACAGGAATCACCACTTCTGCAAATA--CTCTCTC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169863353 82 + 171630274 AGAAAC-AGCATTAT-AAAG---ATCCATTTCGTGTCATT-----AATTTGTGAAATTCCATAGAAATCACCATTTCTGCAAATA--CTCTGTC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1276583 83 - 2905041 ATAAAC-AGCGTTAT-AAA----ATCCATTTGGTGTAATT-----AATTTGTGAAATTCCATAGAAATCACTGTTTCTGCAAATACTCTCTGTC i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1233357 79 - 2164891 AGAAAC-AGCATTAT-AAAG---ATCCATTTGGTGTAATT-----AATTTGTGAAATTCCATAGAAATCACCGTTTCTGCAAATA--CTCT--- i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1487191 82 - 1813869 AGAAAC-AGCATTAT-AAAG---ATCCATTTGGTGTAATT-----AATTTGTGAAATTCCATAGAAATCACCGTTTCTGTAAATA--TTCTGTC i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10937335 83 - 12073884 GGAAAC-AGCATGATAAATA---AAAT----CATCT-ATCTATGGAATTTCTGAAATTCCATAGAAATAACCTTTTCTCCAAACT--CTTTCTC i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56160948 79 + 122678785 AGCAGC-AGTATAAATACAG---TCATGTTTGATGT---------AACTTAGGGAATTCCATAGAGACCACCTTCTCTACATGTT--CTCTCCC i canFam3.chr1 C 0 I 1683 s dasNov3.JH569188 542491 82 + 760995 AGAAACAAATATAATTGGAAACCATCTATTGGGTAT---------AATTT-TGAAATTCCACTGAAGACATCTTTTCTACAAATT--CACTTCC i dasNov3.JH569188 I 22 C 0 a score=1474967.000000 s hg38.chr6_KB021644v2_alt 87146 180 + 185823 AATA-----TATGGACACACATGCAAGTAAATGGTTGTGAATTCATT-AATAGAACA-----------------CTACCCAGCA---------------------------------CAC-----TTAC------------------------------TCATCAACtgggctcatttgatctttctaagcttctgtttccatgtctgcaaataggaatgataatagctcttacctcacagcacagtagtgatgattaactaa----------------------------------------------------tatcatct s panTro5.chr6 173539070 180 + 175400573 AATA-----TATGGACACACATGCAAGCAAATGGTTGTGAATTCATT-AATAGAACA-----------------CTACCCCGCA---------------------------------CAC-----TTAC------------------------------TCATCAACtgggctcatttgatctttctaagcttctgtttccatgtctgcaaataggaatgataatagctcttacctcacagcacagtagtgatgattaactaa----------------------------------------------------tatcatct i panTro5.chr6 C 0 C 0 s panPan2.chr6 171777720 180 + 173848474 AATA-----TATGGACACACATGCAAGCAAATGGTTGTGAATTCATT-AATAGAACA-----------------CTACCCCGCA---------------------------------CAC-----TTAC------------------------------TCATCAACtgggctcatttgatctttctaagcttctgtttccatgtctgcaaataggaatgataatagctcttacctcacagcacagtagtgatgattaactaa----------------------------------------------------tatcatct i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11459550 180 - 12463322 GATA-----TATGGACACACATGCAAGCAAATGGTTGTGAATTCATT-AATAGAACA-----------------CTACCCAGCA---------------------------------CAC-----TTAC------------------------------TCATCAACtgggctcatttgatctttctaagcttctgtttccatgtctgcaaataggaatgataatagctcttacctcacagcacagtagtgatgattaactaa----------------------------------------------------tatcatct i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156286168 180 + 157873769 AATA-----TATAGACACACATGCAAGCAAATGGTTGTGAATTCGTT-AACAGAACA-----------------CTACCCAGCA---------------------------------CAC-----TTAC------------------------------TCATCAACtgggctcatttgatctttctaagcttctgtttccatgtctgcaaataggaatgataatagctcttacctcacagcgcagtagtgatgattaactaa----------------------------------------------------tatcatct i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170313085 181 + 172585720 AATA-----TATGGACACGCACATGAGCAAGCGGTTGTGCATTTATTCGATAGAACA-----------------CTACCCAGCA---------------------------------CGC-----GTAC------------------------------TCATCAACtgggctcatttgatctttctaagcttctgtttccatgtttgcaaataggaatgataatagctgttacctcacagtatagtagtgatgattaactaa----------------------------------------------------tttcttct i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169058923 181 - 170955103 AATA-----TATGGACACGCACATGAGCAAGTGGTTGTGCATTTATTCGATAGAACG-----------------CTACCCAGCA---------------------------------CGC-----GTAC------------------------------TCATCAACtgggctcatttgatctttctaagcttctgtttccatgtttgcaaataggaatgataatagctgttacctcacagtatagtagtgatgattaactaa----------------------------------------------------TTTCTTCT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8345617 181 + 10161646 AATA-----TATGGACACGCACATGAGCAAGTGGTTGTGCATTTATTCGATAGAACG-----------------CTACCCAGCA---------------------------------CGC-----GTAC------------------------------TCATCAACtgggctcatttgatctttctaagcttctgtttccatgtttgcaaataggaatgataatagctgttacctcacagtatagtagtgatgattaactaa----------------------------------------------------tttcttct i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1376313 181 + 3144229 AATA-----TATGGACACGCATATGAGCAAATGGTTGTGCATTTATTCGATAGAACA-----------------CTACCCAGCA---------------------------------CAC-----GTAC------------------------------TCATCAAttgggcttatttgatctttctaagcttctgtttccatgtctgcaaataggagtggtaatagctcttaccttacagtacagttgtgacgattaactaa----------------------------------------------------tatcctct i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96654644 181 + 98384682 AATA-----TATGGACAGGCATACGAGCAAATGGTTGTGCATTTATTCGATAGAACG-----------------CTACCCAGCA---------------------------------TAC-----GTAC------------------------------TCATCAAttgggctcatttgatctttctaagcttctgtttccatgtctgaaaataggagtgataatagctcttaccttacagtacagttgtgacgattaactaa----------------------------------------------------tatcctct i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8199581 181 - 10857215 AATA-----TATGGACACGCATATGAGCAAATGGTTGTGCATTTATTCGATAGAACG-----------------CTACCCAGCA---------------------------------CAC-----GTAC------------------------------TCATCAAttgggctcatttgatctttctaagcttctgtttccatgtctgcaaataggagtgataatagctcttaccttacagtacagttgtgacgattaactaa----------------------------------------------------tatcctct i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15593643 181 - 23502949 AATA-----TATGGACACGCATATGAGCAAATGGTTGTGCATTTATTCGATAGAACG-----------------CTACCCAGCA---------------------------------CAC-----GTAC------------------------------TCATCAACtgggctcatttgatctttctaagcttctgtttccatgtctgcaaataggaatgataatagctgttacctcacagcacagtagtgacgattaactaa----------------------------------------------------tatcctct i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169863435 225 + 171630274 ---------CGTGGACA--CACGTGGGCAAATGGCTGTGCATTCCTTCAGCAGAACG-----------------CTGTCCAGCA---------------------------------TGC-----TCAC------------------------------TCATAAACTGGCTtcatttgatctttctaa-ctcgggtttccatgtctgcagacaggaatgatggtagctcttacctcacaggacagcagcaaggattagctaacataacg-ctgtaaattacttagAGTAGAGATGAGAAAAATTGAGTTACTGGTATCACCA i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1276666 227 - 2905041 ---------TGTGGACA--CAAGTGAGCAAATGGTTGTGCATTCATTCAGCAGAACG-----------------CTGTCCAGCA---------------------------------CAC-----TCAC------------------------------TCATAAACTGGCTtcatttgatctttctaagctctggtttccgtgtctgcagacaggaatgatgatagctcttacctcataggacagcagtgaggatgagctaatataacgcctgtaaattacttagAGTAGAGATGAGAAAAATTGAGTTACTCCTATCATCG i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1233436 226 - 2164891 ----------GTGGACA--CACGTGAGCAAATGGTTGTGCATTCATTCAGAAGAACG-----------------CTGTCCAGCA---------------------------------CAC-----TCAC------------------------------TCATAAGCTGGCTtcatttgatctttctaagctccagtttccatgtctgcagacaggaatgatgacagctcttactgcacaggagagcagtgaggattagctgatataacgcctgtaaattacttagAGTAGAGATGAGAAAAATTGAGTTACTGCTATCATCG i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1487273 226 - 1813869 ---------TGTGGACA--CACGTGAGCAAATGGTTGTGCATTCATTCAGCAGAACG-----------------CTGTCCAGCA---------------------------------CGC-----TCAC------------------------------TCATAAGCTGGCTtcatttggtctttctaagctctggtttccatgtctgcagacaggaatgctgatagctcttaccttacaggacagcagtgaggattagctaatataacgcctat-aattacttagagtagAGATGAGAAAAATTGAGTTACTGCTATCATCA i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10937418 262 - 12073884 ACCATTCCTTATC-ACATGCACATAAGCAGACAGCTGTGCGTTCATTCAGTGGAGTGAATGAATACAGAGATTTCTCTACAGCACTGGGGTCATGGGCTGGGGTCATGCCCTAGAGTCAC-----ACGCTGAGGTCAGAGCTGGGGTCATATGCTGGAGTCACATGCtgggctcacttagcct---taaccctctgtttccacatctacacagaggacaggtgacagcatgtctctcatgggacagtagcagtgagtagcgaa----------------------------------------------------tatcaact i otoGar3.GL873575 C 0 I 66 s dasNov3.JH569188 542573 113 + 760995 -----------------------------------------------------ACCA-----------------CT-CTCTGCA---------------------------------TATATGTAATAC------------------------------ACATGAGC--------------------gaacttcagtttccatgtctacaaatcagaagaacggtagtacttatttcacaatagagtag----gactaattaa----------------------------------------------------taggatgc i dasNov3.JH569188 C 0 C 0 e canFam3.chr1 56161027 1683 + 122678785 I a score=78107.000000 s hg38.chr6_KB021644v2_alt 87326 7 + 185823 ttagaaa s panTro5.chr6 173539250 7 + 175400573 ttataaa i panTro5.chr6 C 0 C 0 s panPan2.chr6 171777900 7 + 173848474 ttataaa i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11459730 7 - 12463322 ttataaa i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156286348 7 + 157873769 ttataaa i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170313266 7 + 172585720 ttataaa i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169059104 7 - 170955103 TTATAAA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8345798 7 + 10161646 ttataaa i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1376494 7 + 3144229 ttataaa i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96654825 7 + 98384682 ttataaa i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8199762 7 - 10857215 ttataaa i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15593824 7 - 23502949 ttataaa i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169863660 7 + 171630274 TTATAAA i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1276893 7 - 2905041 CTATAAA i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1233662 7 - 2164891 TTATAAA i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1487499 7 - 1813869 TTATAAA i aotNan1.NW_018494782v1 C 0 C 0 s dasNov3.JH569188 542686 7 + 760995 atataaa i dasNov3.JH569188 C 0 I 805 e otoGar3.GL873575 10937680 66 - 12073884 I e canFam3.chr1 56161027 1683 + 122678785 I a score=2945811.000000 s hg38.chr6_KB021644v2_alt 87333 322 + 185823 acttaacattgtTCTggccgggcagggtggatcacacctgtcatcccagcactttgggaggccgaggcaggtgggtcatttgaggtcaggagtttgagaccagcctggtcaacatggtgaaaccccatctc--tagtaaaaatacaaacattagccgggcgtggtggcgcttgcctgtagtcccaactactagggaggccgagttaggaaaatcacttgaacctgggaggcagaggttgcagtgagctgagattgtgccactgcactccagcctgggtgacagagtgagattttgtctcaaaaaac--------aaacaaacaaaaaCTTTA s panTro5.chr6 173539257 322 + 175400573 acttaacattgtTCTggccgggcagggtggatcacacctgtcatcccagcactttgggaggccgaggcaggtgggtcatttgaggtcaggagtttgagaccagcctggtcaacatggtgaaaccccatctc--tagtaaaaatacaaacattagccgggcgtggtggcgcttgcctgtagtcccaactactagggaggccgagttaggaaaatcacttgaacctgggaggcagaggttgcagtgagctgagattgtgccactgcactccagcctgggtgacagagtgagattttgtctcaaaaaac--------aaacaaacaaaaaCTTTA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171777907 322 + 173848474 acttaacattgtTCTggccgggcagggtggatcacacctgtcatcccagcactttgggaggccgaggcaggtgggtcatttgaggtcaggagtttgagaccagcctggtcaacatggtgaaaccccatctc--tagtaaaaatacaaacattagccgggcgtggtggcgcttgcctgtagtcccaactactagggaggccgagttaggaaaatcacttgaacctgggaggcagaggttgcagtgagctgagattgtgccactgcactccagcctgggtgacagagtgagattttgtctcaaaaaac--------aaacaaacaaaaaCTTTA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11459737 322 - 12463322 acttaacaTTGTTCTggccgggcagggtggatcacacgtgtcatcccagcactttgggaggccgaggcaggtgggtcatttgaggtcaggagtttgagaccagcctggtcaacatggtgaaaccccatctc--tagtaaaaatacaaacattagccaggcgtggtggcgcatgcctgtagtcccaactactagggaggccgagttaggaaaatcacttgaacctgggaggcagaggttgcagtgagctgagattgtgccactgcactccagcctgggtgacagagtgagattttgtctcaaaaaac--------aaacaaacaaaaaCTTTA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156286355 318 + 157873769 aTTTAACATTGTTCTggccaggcagagtggatcacacctgtcatcccagcactttgggaggccaaggcaggtgggtcatttgaggtcaggagtttgagaccagcctggtcaacatggtgaaaccccatctc--cagtaaaaatacaaacattagccaggtgtggtggcgcgtgcctgtagtcccaactactagggaggccgagttaggaaaatcacttgaacctgggaggcagaggttgcagtgagccgagattgtgccactgcactccagcctgggtgacagagtgagactctgtctcaaaaaac--------aaacaaaC----ACCTTA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170313273 332 + 172585720 acTTAACATTGTTCTggctgggcgcagtggatcacacctgtcatcccagcactttgggaggccaaggcaggtggatcatttgatgtcaggagtttgagaccagcctggtcaacatggtgaaaacccatctctataggaaaaatacaaacattagccgggtgtgggggcgcgtgcctgtagtcccaactactagggaggctgagttaggaaaatcacttgaacctgggaggccggggttgcagtgagctgagatcgtgccactgcactccagcctgagtgacagagtgagagtctgtctggaaaaacaaacaaataaacaaacaaaCACCTTA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169059111 332 - 170955103 ACTTAACATTGTTCTggctgggcgcagtggatcacacctgtcatcccagcactttgggaggccaaggcaggtggatcatttgatgtcaggagtttgagaccagcctggtcaacatggtgaaaacccatctctataggaaaaatacaaacattagccgggcgtgggggcgcgtgcctgtagtcccaactactagggaggctgagttaggaaaatcacttgaacctgggaggccggggttgcagtgagctgagatcgtgccactgcactccagcctgagtgacagagtgagagtctgtctggaaaaacaaacaaataaacaaacaaaCACCTTA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8345805 332 + 10161646 acTTAACATTGTTCTggctgggcgcagtggatcacacctgtcatcccagcactttgggaggccaaggcaggtggatcatttgatgtcaggagtttgagaccagcctggtcaacatggtgaaaacccatctctataggaaaaatacaaacattagccgggcgtgggggcgcgtgcctgtagtcccaactactggggaggctgagttaggaaaatcacttgaacctgggaggccggggttgcagtgagctgagatcgtgccactgcactccagcctgagtgacagagtgaaagtctgtctggaaaaacagacaaataaacaaacaaaCACCTTA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1376501 330 + 3144229 acttaacatggtTCTggccaggcgcagtggatgacacctgtcatcccagcactttgggaggccgaggcgagtggatcatttgaggtcaggagtttcagaacagcctggtcaacatggtgaaaacccatctc--tagtaaaaatacaaacattagccgggtgtcggggcgcgtgcctgtagtcccaactactagggaggctgagttaggaaaatgacttgaacctgggaggccgaggttgcaatgagctgagatcgtgccactgcactccagcctgggcgacagagtgagactctgtctcgaaaaacaaacaaataaacaaacaaaCACCTTA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96654832 330 + 98384682 acttaacaTTGTTCTggccgggcgcagtggatcacacctgtcatcccagcactttgggaggccaaggcaggtggatcatttgaggtcaggagtttgagaccagcacggtcaacatggtgaaaacccatctc--tagcaaaaatacaaacattagccgggcgtaggggcgcgtgcctgtagtcccaactactagggaggctgagttaggaaaatcacttgaacctgggaggccgaggttgcagtgagctgagatcgtgccactgcactccagcctgggtgacagagtgagactctgtctcgaaaaacaaacaaataaacaaacaaaCACCTTA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8199769 330 - 10857215 acttaacatggtTCTggccaggcgcagtggatcacacctgtcatcccagcactttgggaggccgaggcgagtggatcatttgaggtcaggagtttcagaacagcctggtcaacatggtgaaaacccatctc--tagtaaaaatacaaacattagctgggtgtcggggcgcgtgcctgtagtcccaactactagggaggctgagttaggaaaatcacttgaacctgggaggccgaggttgcagtgagctgacatcgtgccactgcactccagcctgggcgacagagtgagactctgtctcgaaaaacaaacaaataaacaaacaaaCACCTTA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15593831 329 - 23502949 acttaacatggttctgg-taggcgcagtggatcacacctgtcatcccagcacttggggaggctgaggcgggtggatcatttgaggtcaggagtttgagaccagcttggtcaacatggtgaaaacccatctc--tagcaaaaatacaaacattagccgggcatgggggcgtgtgcctgtagtcccaactactagggaggctgagttaggaaaatcacttgaacctgggaggccgaggttgcagtgagctgagattgtgccactgcactccagcctgggtgacagagtgagactctgtctcgaaaaacaaacaaataaacaaacaaaCACCTTA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169863667 322 + 171630274 ACTTAACATTGTTCTggccaggcacagtggcttaggcctgtaatcccaacactctgggaggcctaggcgagcagatcatttgaggtc-agagtttgagaccagcctggtcaacatggggaaaccctgtctc--tagtgaaaatacaaacgttaagcagacttggtggcatga-cctgttgtcccagctactctgaaggctgaggtaggaaaatcatctgaacccgggaggcagaggttgcagtgagccgagatcatgccaccccactccagcctgggcgacaaagtgagactctgtctcaaaaaaata------aaataaaataaaCCCTTG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1276900 322 - 2905041 ACTTAACATTGTTCTggccagtcacagtggctcacaccgataatcccaacacgctgggaggcctaggtgggcagatcatttgaggtc-ggagtttgagaccagcctggtcaacatggggaaaccccatctc--tagtaaaaatacaaacattaaccaaacttggtggcatgaccctgtcatcccagctactctgaaggctgaggtaggaaaatcatttgaacccgggaggcaaaggttgcagtgagctaagatcatgccactgcactccaccctgggtgacagagtaagactctgtctc-aaaaaata------aaataaaataaaCCCTTA i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1233669 323 - 2164891 ACTTAACATTGTTCTggccagtcacggtggctcacgcctataatcccaacactctgggaggcctaggcgggcagatcatttgaggcc-ggagtttgagaccagcctggtcaacatggggaaacctcgtctc--tagtaaaaatacaaacattaaccagacttggtggcatgaccctgtcgtcccagctactctgaaggctgaggcaggaaaatcatttgaacccgggaggcagaggttgcagtgagccgagatcatgccactgcactccagcctgggtgacagagtgagactctgtcctaaaaaaata------acataaaataaaCCCTTA i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1487506 323 - 1813869 ACTTAATATTGTCCTAgccaggcaaggtggctcacgcctataatcccaacactctgggaggcctaggcaggcagatcatttgaggtc-ggagtttgagaccagcctggtcaacatgggggaaccccatctc--tagcgaaaagacaaacattaaccagactcggtggcatgaccctgtcgtcccagctactctgaaggctgaggtaggaaaatcatttgaacccgggaggcagaggttgcagtgagccgagatcatgccactgcactccagcctgggtgacagagtgagactctgtctcaaaaaaata------aaataaaataaaCCCTTA i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10937680 66 - 12073884 I e dasNov3.JH569188 542693 805 + 760995 I e canFam3.chr1 56161027 1683 + 122678785 I a score=1431892.000000 s hg38.chr6_KB021644v2_alt 87655 157 + 185823 TCATTGTTCTGGTACTGTGTGTGTTGGAAAAATGGCAGAAGGAAGATGGGATTCCAGGGAAGTGTCCTGCAGATGAAGGAGGAGATGCTGATGGTAATTG----------------------------------------------TATGTTGGGAGGGCACAGGGAGAATCCTTCGCATGTGTG--TTTGTGTGT--GAGGAATGT s panTro5.chr6 173539579 157 + 175400573 TCATTGTTCTGGTACTGTGTGTGTTGGAAAAATGGCAGAAGGAAGATGGGATTCCAGGGAAGTGTCCTGCAGATGAAGGAGGAGATGCTGATGGTAATTG----------------------------------------------TGTGTTGGGAGGGCACAGGGAGAATCCTTCGCATGTGTG--TTTGTGTGT--GAGGAATGT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171778229 157 + 173848474 TCATTGTTCTGGTACTGTGTGTGTTGGAAAAATGGCAGAAGGAAGATGGGATTCCAGGGAAGTGTCCTGCAGATGAAGGAGGAGATGCTGATGGTAATTG----------------------------------------------TGTGTTGGGAGGGCACAGGGAGAATCCTTCGCATGTGTG--TTTGTGTGT--GAGGAATGT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11460059 157 - 12463322 TCATTGTTCTGGTACTGTGTGTGTTGGAAAAATGGCAGAAGGAAGATGGGATTCCAGGGAAGTGTCCTACAGATGACGGAGGAGATGCTGATGGTAATTG----------------------------------------------TGTGTTGGGAGGGCACAGGGAGAATCCTTCGCATGTGTG--TGTGTGTGA--GAGGAATGT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156286673 158 + 157873769 CCGTTGTTCTGGTGCTGTGTGTGTTGGAAAAATGGCAGAAGGAAGATGGGATTCCAGGGAAGTGTCCTACAGATGAAGGATGAGATGCTGATGGTAATTG----------------------------------------------TGTGTTGGGAGGGCATATGGAG-ATCCTTTGCATGTGTG--TTTGTGTGTGAGAGGAATGT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170313605 159 + 172585720 TCACTGTTCTGGTGCTGCGTGTGTTGGAAAAATGGCAGAAGGAAGATGGGACTCCAGAGAAGCGTCCTACAGATGAAGGATGAAATGCTGATGGTAATTG----------------------------------------------TTTGTTGGGAGAGCACAGGGAGAATCCTTTGCATGTGTG--TTTGTGTGTGAGGGGAATGT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169059443 159 - 170955103 TCACTGTTCTGGTGCTGCGTGTGTTGGAAAAATGGCAGAAGGAAGATGGGACTCCAGAGAAGCGTCCTACAGATGAAGGATGAAATGCTGATGGTAATTG----------------------------------------------TTTGTTGGGAGAGCACAGGGAGAATCCTTTGCATGTGTG--TTTGTGTGTGAGGGGAATGT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8346137 159 + 10161646 TCACTGTTCTGGTGCTGCGTGTGTTGGGAAAATGGCAGAAGGAAGATGGGACTCCAGAGAAGCGTCCTACAGATGGAGGATGAAATGCTGATGGTAACTG----------------------------------------------TTTGTTGGGAGAGCACAGGGAGAATCCTTTGCATGTGTG--TTTGTGTGTGAGGGGAATGT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1376831 159 + 3144229 TCATTGTTCTGGTGCTGCGTGTGTTGGAAAAATGGCAGAAGGAAGATGGGACTCCAGAGAAGCGTCCTACAGATGAAGGATGAAATGCTGATGGTAACTG----------------------------------------------TTTGTTGGGAGGGCGCAGGGAGAATCCTTTGCATGTGTG--TTTGTTTGTGAGGGGAATGT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96655162 159 + 98384682 TCACTGTTCTGGTGCTGTGTGTGTTGGAAAAATGGCAGAAGGAAGATGGGATTCCAGAGAAGCGTCCTACAGATGAAGGATGAGATGCTGATGGCAATCG----------------------------------------------TTTGTTGGGAGGGCACAGGGAGAATCCTTTCCATGTGTG--TTTGTGTGTGAGGGGAATGT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8200099 159 - 10857215 TCATTGTTCTGGTGCTGCGTGTGTTGGAAAAATGGCAGAAGGAAGATGGGACTCCAGAGAAACGTCCTACAGATGAAGGATGAAATGCTGATGGCAACTG----------------------------------------------TTTGTTGGGAGGGCGCAGGGAGAATCCTTTGCATGTGTG--TTTGTGTGTGAGGGGAATGT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15594160 159 - 23502949 TCACTGTTCTGGTGCTGTGTGTGTTGGAAAAATGGCAGAAGGAAGATGGGATTCCAGAGAAGCATCCTACAGACGAAGGATGAAATGCTGATGGTAATCG----------------------------------------------TTTCTTGGGAGGGCACAGGGAGAATCCTTTGCATGTGTG--TTTGTGTGTGAGGGGAATGT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169863989 205 + 171630274 TCATTGCTCCAGTGCTGTATATGTTGGAAAAATGGCAGAAGGAAGATGGGATTCCAGGAACGTGTCCTACAGGTGAAGGGTGAGATGCTGATGGTGACTGCCTTGGGAGGCCCAGGGAGGGTGAAGGGTGAGATGCTGATGGTGACTGCCTTGGGAG-GCCCAGGGAGAAGGCTTTGCGCGTGTGCCTTTGTGCATG-ACGGAATGC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1277222 159 - 2905041 TCATTGTTCCAGGGCTATGTATGTTGGAAAAATGGCAGAAGGAAGATGGGATTCCAGGAACGTGTCCTACAGGTGAAGGGTGAGATGCTGATGGTGACTG----------------------------------------------TGCCTTGGGAG-GCCCAGGGAGAATGCTTTGCGCATGTGTGTTTGTGCATG-AGGGAATGT i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1233992 157 - 2164891 TCATTGTTCCGGTACTGTATATGTTGGAAAAATGGCAGAAAGAATATGGGATTCCAGGAACGTGTCCTGTAGGTGAAGGGTGAGATGCTGTTGGGGACTG----------------------------------------------TGCCTTGGGAG-GCCCAGGGAGAATGCTTTGCGCGTGTG--TTTGTGCATG-AGGGAATGT i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1487829 159 - 1813869 TCATTGTTCTGGTGCTGTATATGTTGGAAAAATGGCAGAAGGAAGATGGGATTCCAGGAACGTGTCCTACAGGTGAAGGGTGAGATGCTGATGGCGACTG----------------------------------------------TGCCTTGGGAG-GCCCGGGGAGAATGCTTTGCGCGCGTGTGTCTGTGCATG-AGGGAATGT i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10937746 151 - 12073884 TTAATGTGTAGGTGCCAGATGTGATGGGAAAATGGCAGAAGGCAGACTGGATCCCAG-GAGGTGCACAAAAGATGGAGGGCAAGATGTGCAGAGGAATAG----------------------------------------------GCTGGTGTGCGTGT---GGGAAAGTTCt----gtgtgtg--catgagtgtgtcatgagtat i otoGar3.GL873575 I 66 I 1181 e dasNov3.JH569188 542693 805 + 760995 I e canFam3.chr1 56161027 1683 + 122678785 I a score=983380.000000 s hg38.chr6_KB021644v2_alt 87812 112 + 185823 TTCTTGCAAGTGGAAGGTAACTGTTGCCATGTGTTTGTGTGCCGGGTAGTCCTTTTTCTCCTATGTCTCACCCAATGCATCCAATTTGACACTAGAGCAGAAAACAGATTCC s panTro5.chr6 173539736 112 + 175400573 TTCTTGCAAGTGGAAGGTAACTGTTGCCATGTGTTTGTGTGCCGGGTAGTCCTTTTTCTCCTATTTCTCACCCAGTGCATCCAATTTGACACTAGAGCAGAAAACAGATTCC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171778386 112 + 173848474 TTCTTGCAAGTGGAAGGTAACTGTTGCCATGTGTTTGTGTGCCGGGTAGTCCTTTTTCTCCTATTTCTCACCCAATGCATCCAATTTGACACTAGAGCAGAAAACAGATCCC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11460216 112 - 12463322 TTCTTGCAAGTGGAAGGTAACTGTTGCCATGTGTTTGTGTGCCGGGTAGTCCTTTTTCTCCTATTTCTCACCCAATGCATCCAATTTGACACTAAAGCAGAAAACAGATTCC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156286831 112 + 157873769 TTCTTGCAAGTGGAAGATAACTGTTGCCATGTGTTTGTGTGCCGGGTAGTCCTTTTTCTCCTATTTCTCACCCAATGTGTCCAATTTGACGTTAGAGCAGAAAACAGACGCC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170313764 112 + 172585720 TTCTTGCAAGTGGAAGATAACTGTTGCCATGTGTTTGTGTGCCAGGTAATCAATTTTCTCCTATTTCTCACCCAATGCGTCCAATTTGACACTAGAGCAGAAAACAGATCCC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169059602 112 - 170955103 TTCTTGCAAGTGGAAGATAACTGTTGCCATGTGTTTGTGTGCCAGGTAATCAATTTTCTCCTATTTCTCACCCAATGCGTCCAATTTGACACTAGAGCAGAAAACAGATCCC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8346296 112 + 10161646 TTCTTGCAAGTGGAAGATAACTGTTGCCATGTGTTTGTGTGCCAGGTAATCAATTTTCTCCTATTTCTCATCCAATGCGTCCAATTTGACACTAGAGCAGAAAACAGATCCC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1376990 112 + 3144229 TTCTTGCAAGTGGAAGATAACTGTTGCCATGTGTTTGTGTGCCAGCTAATCCTTTTTCTCTTATTTCTCACCTAATGCGTCCAATTTGACACTAGAGCAGAAAACAGATCCC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96655321 112 + 98384682 TTCTTGCAAGTGGAAGATAACTGTTGCCATGTGTTTGTGAGCCAGGTAATCCTTTTTCTCCTATTTCCCACCCAATGCGTCCAATGTGACACTAGAGCAGAAAACAGATCAC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8200258 112 - 10857215 TTCTTGCAAGTGGAAGATAACTGTTGCCATGTGTTTGTGTGCCAGCTAATCCTTTTTCTCCTATTTCTCACCCAATGCATCCAATTTGACACTAGAGCAGAAAACAGATCCC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15594319 112 - 23502949 TTCTTGCAAATGGAAGATAACTGTTGCCATGTGTTTGTGTGCCAGGTAGTCCTTTTTCTCCTATTTCTCACCCAATGCGTCCAGTTTGACACTAGAGCAGAAAACAGATGTC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169864194 101 + 171630274 TTCTTG-----------TGACAGTTGCCCTGTGTTTGTGTGCCATGCAGTCCTTTTTCTCCGATTTCTCCCCAAAGGTCTCCAATTTGACAGTAGAGCAGAAAACAGATTCC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1277381 101 - 2905041 TTCTTG-----------TAACAGTTGCCCTGTGTTTGTGTGCCATGCAGTCTGTTTTCTCCTATTTCTCACCAAATGTCTCCAATTTGACAGTAGAATAGAAAACGGATTTC i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1234149 101 - 2164891 TTCTTG-----------TAACCGTTGCCCTGTGTTTGTGTGCCATGCAGTCCTTTTTCTCCTATTTCTCACCAAATGTCTCCAATTTGACAGTAGAGCAGAAAACAGATTCC i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1487988 99 - 1813869 TTCTTG-----------TAACAGTTGCCC--TGTTTGTGTGCCATGCAGTCCTTTTTCTCCCATTTCTCACCAAATGTCTCCAATTTGACAGTAGAGCAGAAAACAGATTCC i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10937897 1181 - 12073884 I e dasNov3.JH569188 542693 805 + 760995 I e canFam3.chr1 56161027 1683 + 122678785 I a score=-22750.000000 s hg38.chr6_KB021644v2_alt 87924 5 + 185823 C-tttt s panTro5.chr6 173539848 1 + 175400573 C----- i panTro5.chr6 C 0 C 0 s panPan2.chr6 171778498 1 + 173848474 t----- i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11460328 1 - 12463322 C----- i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156286943 5 + 157873769 C-TTTt i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170313876 5 + 172585720 C-GCCC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169059714 5 - 170955103 C-GCCC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8346408 5 + 10161646 C-GCCC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1377102 5 + 3144229 C-CGCC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96655433 5 + 98384682 C-GCCC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8200370 6 - 10857215 CTGCCC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15594431 5 - 23502949 C-CGCC i colAng1.NW_012114488v1 C 0 C 0 s cebCap1.NW_016107695v1 1234250 5 - 2164891 -TTTTT i cebCap1.NW_016107695v1 C 0 I 30 s aotNan1.NW_018494782v1 1488087 5 - 1813869 -TTTTT i aotNan1.NW_018494782v1 C 0 I 32 e otoGar3.GL873575 10937897 1181 - 12073884 I e saiBol1.JH378287 1277482 0 - 2905041 C e calJac3.chr4 169864295 0 + 171630274 C e dasNov3.JH569188 542693 805 + 760995 I e canFam3.chr1 56161027 1683 + 122678785 I a score=1502132.000000 s hg38.chr6_KB021644v2_alt 87929 306 + 185823 tttttttt--ttttttttttttttttttgagatgcagtctcgctctgtcgccaggctagagtgcagtggcacaatcttggctcactgcaccctctgcctcctaggttcgagcgattctcctgtctcagcctcctgagtagctgggactataggcgcgcaccaccacgcccagctaatttttgtatttttagtagagacggggtttcaccatgttggccaggatggtctcaatctcctgacttcaggtgatccacccgcctcggcctcccaaagtgctgggattatagaagtgagccaccacgcccggc s panTro5.chr6 173539849 306 + 175400573 tttttttt--ttttttttttttttttttgagatgcagtctcgctctgtcgccaggctagagtgcagtggcacaatcttggctcactgcagcctctgcctcctaggttcgagcgattctcctgtctcagcctcctgagtagcccggactataggcgcgcaccaccacgcccagctaatttttgtatttttagtagagacggggtttcaccatgttggccaggatggtctcaatctcctgacttcaggtgatccacccgcctcggcctcccaaagtgctgggattataggagtgagccaccacgcctggc i panTro5.chr6 C 0 C 0 s panPan2.chr6 171778499 296 + 173848474 ------------ttttttttttttttttgagatgcagtctcgctctgtcaccaggctagagtgcagtggcacaatcttggctcactgcagcctctgcctcctaggttcgagcgattctcctgtctcagcctcctgagtagcccggactataggcgcgcaccaccacgcccagctaatttttgtatttttagtagagacggggtttcaccatgttggccaggatggtctcaatctcctgacttcaggtgatccacccgcctcggcctcccaaagtgctgggattataggagtgagccaccacgcctggc i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11460329 306 - 12463322 tttttttt--ttttttttttttttttttgagatgcagtctcgctctgttgccagggtagagtgcagtggcacaatcttggctcactgcagcctctgcctcctaggttcgagcgattctcctgtctcagcctcctgagtagccgggactataggcacgcacaaccacacccagctaatttttgtatttttagtagagacggggtttcaccatgttggccaggatggtctcaatctccggacttcaggtgatccacccgcctcggcctcccaaagtgctgggattataggactgagccaccacgcccggc i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156286948 306 + 157873769 ttgtttgt--ttgtttgtttgtttgtttgagatggagtctcgctctgtcgccaggctggagtgcagtggcacaatcttggctcactgcaatctctgcctcccaggttctagtgattctcctgtcctagcctcctgagtagctgggactacaggcatgcgccaccacacccagctaatttttgtatttttagtagagacggggtttcaccatgttggccaggatggtctcaatctcctgccctcaggtgatccgcccacctcggcctcccaaagtgctaggattacaggcgtgagccaccatgcctggc i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170313881 287 + 172585720 tt--------ttttttttttttttttttgagatggagtctcgctctgtcgtcaggctggagtgcagtggcacaatcatggctcactgcaacctctgcctcctgggttcaaacaattctcctgtctcagcctcctgagtag--------acaggcgcccaccaccacgcccagctgatttttgtatttttggtagagatggggttttaccatgttggccagtatggtctcgatctcctgacctcaggtgatccacccatctcagcctcccaaagtgctgggattacaagcgtgagccatcac-----AG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169059719 283 - 170955103 ------------ttttttttttttttttgagatggagtctcgctctgtcgtcaggctggagtgcagtggcacaatcatggctcactgcaacctctgcctcctgggttcaaacaattctcctgtctcagcctcctgagtag--------acaggcgcccaccaccacgcccagctgatttttgtatttttggtagagatggggttttaccatgttggccagtatggtctcgatctcctgacctcaggtgatccacccatctcagcctcccaaagtgctgggattacaagcgtgagccatcac-----AG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8346413 279 + 10161646 ----------------Ctttttttttttgagatggagtctcgctctgtcgtcaggctggagtgcagtggcacaatcatggctcactgcaacctctgcctcctgggttcaaacaattctcctgtctcagcctcctgagtag--------acaggcgcccaccaccacgcccagctgatttttgtatttttggtagagatggggttttaccatgttggccagtatggtctcgatctcctgacctcaggtgatccacccatctcagcctcccaaagtgctgggattacaagcgtgagccatcac-----AG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1377107 287 + 3144229 Ct--------ttttttttttttttttttgagatggagtcttgctctgtcgccaggccagagtggagtggcacaatcatggctcactgcaacctctgccccctaggttcaagcaattctcctgtctcagcctcctgagtag--------acaggtgtccaccaccacccccagctgatttttatatttttagtagagatgggattttaccatgttggccagtatggtctcgatctcctgacctcaggtgatccacccatttcggcctcccaaagtgctgggattacaggcgtgaaccatcac-----ac i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96655438 295 + 98384682 tttttgtttgtttgtttgtttgttttttgagatggagtctcgctctgtcatcaggctggagtgcagtggcacaatcatggctcactgcaacctctgcctcctgggttcaaacaattctcctgtctcagcctcctgagtag--------acaggcgcccaccaccacgccgagctgatttttgtatttttggtagaggtggggttttaccatgttggccagtatggtctcgatctcctgacctcaggtgatccacccatctcggcctcccaaagtgctgggattacaggcgtgagccatcac-----AG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8200376 288 - 10857215 ttt-------ttttttttttttttttttgagatggagtcttgctctgtcgccaggccagagtggagtggcacaatcatggctcactgcaacctctgccccctaggttcaagcaattctcctgtctcagcctcctgagtag--------acaggtgtccaccaccacccccagctgatttttatatttttagtagagatgggattttaccatgttggccagtatggtctcgatctcctgacctcaggtgatccacccatttcggcctcccaaagtgctgggattacaggcgtgaaccatcac-----ac i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15594436 291 - 23502949 tttttt----ttttttttttttttttttgagatggagtctcactctgtcgccaggctggagtgcagtggcacaatcatggcttactgcaacctcggcctcctgggttcaagcagttctcctgtctcagcctcctgagtag--------acaggcgcccaccaccacgcccagctgatttttgtatttttagtagagatggggttttaccatgttggccagtatggtctcgatctcctgacctcaggtgatccacccatctcggcctcccaaagtgctgggattacaggcgtgagtcaccgc-----gc i colAng1.NW_012114488v1 C 0 C 0 e otoGar3.GL873575 10937897 1181 - 12073884 I e saiBol1.JH378287 1277482 0 - 2905041 C e aotNan1.NW_018494782v1 1488092 32 - 1813869 I e cebCap1.NW_016107695v1 1234255 30 - 2164891 I e calJac3.chr4 169864295 0 + 171630274 C e dasNov3.JH569188 542693 805 + 760995 I e canFam3.chr1 56161027 1683 + 122678785 I a score=45277.000000 s hg38.chr6_KB021644v2_alt 88235 8 + 185823 cAGATTCA s panTro5.chr6 173540155 8 + 175400573 cAGATTCA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171778795 8 + 173848474 cAGATTCA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11460635 8 - 12463322 cAGATTCA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156287254 8 + 157873769 cAGATTCC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170314168 8 + 172585720 CAGATTCC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169060002 8 - 170955103 CAGATTCC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8346692 8 + 10161646 CAGATTCC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1377394 8 + 3144229 cAGTTTCC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96655733 8 + 98384682 CAGATTCT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8200664 8 - 10857215 cAGATTCC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15594727 8 - 23502949 cAGATTCC i colAng1.NW_012114488v1 C 0 C 0 s dasNov3.JH569188 543498 8 + 760995 CAAGTTCC i dasNov3.JH569188 I 805 C 0 e otoGar3.GL873575 10937897 1181 - 12073884 I e saiBol1.JH378287 1277482 0 - 2905041 C e aotNan1.NW_018494782v1 1488092 32 - 1813869 I e cebCap1.NW_016107695v1 1234255 30 - 2164891 I e calJac3.chr4 169864295 0 + 171630274 C e canFam3.chr1 56161027 1683 + 122678785 I a score=244889.000000 s hg38.chr6_KB021644v2_alt 88243 41 + 185823 CTTTTATG--CAG--GTATAGCCATGAAACTTTTAGAGGGCTAGC s panTro5.chr6 173540163 41 + 175400573 CTTTTATG--CAG--GTATAGCCAGGAAACTTTTAGAGGGCTAGC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171778803 41 + 173848474 CTTTTATG--CAG--GTATAGCCAGGAAACTTTTAGAGGGCTAGC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11460643 41 - 12463322 CTTTTATG--CAG--GTATAGCCAGGAAACTTTTAGAGGGCTAGC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156287262 41 + 157873769 CTTTTATG--CAG--GTATAGCCAGGAAGCTTTCGGAGGGCTGGC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170314176 41 + 172585720 CTTTTGTG--CAG--GTATAGCTAGGAAACTTTCAGAGGGGTTGC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169060010 41 - 170955103 CTTTTGTG--CAG--GTATAGCTAGGAAACTTTCAGAGGGGTTGC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8346700 41 + 10161646 CTTTTGTG--CAG--GTATAGCTAGGGAACTTTCAGAGGGGTTGC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1377402 41 + 3144229 CTTTTGTG--CAG--GTATAGCTAGGAAACTTTCAGAGGGGTTGC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96655741 41 + 98384682 CTTTTATG--CAG--GTATAGCTAGAAAACTTTCTGAGGGGTTGC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8200672 41 - 10857215 CTTTTATA--CAG--GTATAGCTAGGAAGCTTTCAGAGGGGTTGC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15594735 41 - 23502949 CTTTTATG--CAG--GCACAGCCAGGAAACTTTCAGAGGGGTTGC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169864295 37 + 171630274 TTTTTATG--CAGGCGTTTTGCCTGGGAATGTTCAGAGG------ i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1277482 37 - 2905041 TTTTTACG--CAGGCGTTTTGCCTGGGAATGTTCAGTGG------ i saiBol1.JH378287 C 0 C 0 s dasNov3.JH569188 543506 39 + 760995 CTTTTATGAAAAG--ATATTGCCAGGTAACATTCAGAGAGC---- i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10937897 1181 - 12073884 I e aotNan1.NW_018494782v1 1488092 32 - 1813869 I e cebCap1.NW_016107695v1 1234255 30 - 2164891 I e canFam3.chr1 56161027 1683 + 122678785 I a score=156409.000000 s hg38.chr6_KB021644v2_alt 88284 15 + 185823 TAAATGGTAGTTCCC s panTro5.chr6 173540204 15 + 175400573 TAAATGGTAGTTCCC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171778844 15 + 173848474 TAAATGGTAGTTCCC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11460684 15 - 12463322 TACATGGTAGTTCCC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156287303 14 + 157873769 TAAAC-GTAGTTCCC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170314217 15 + 172585720 TAAATGGTAGTTCCC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169060051 15 - 170955103 TAAATGGTAGTTCCC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8346741 15 + 10161646 TAAATGGTAGTTCCC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1377443 15 + 3144229 TAAATGGTAGTTCCC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96655782 15 + 98384682 TAACTGGTAGTTCCC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8200713 15 - 10857215 TAAATGGTAGTTCCC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15594776 15 - 23502949 TAAACGGTAGTTTCC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169864332 15 + 171630274 TAAATGGTGGTTCCC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1277519 15 - 2905041 TAAACGGTAGTTCCC i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1234285 15 - 2164891 TAAACGGTAGTTCCC i cebCap1.NW_016107695v1 I 30 C 0 s aotNan1.NW_018494782v1 1488124 15 - 1813869 TAAACGGTAGTTCCC i aotNan1.NW_018494782v1 I 32 C 0 s dasNov3.JH569188 543545 15 + 760995 TAAATAGTCGTGTCC i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10937897 1181 - 12073884 I e canFam3.chr1 56161027 1683 + 122678785 I a score=1255033.000000 s hg38.chr6_KB021644v2_alt 88299 132 + 185823 AAAGGAACAACCTCTTTCCGGTTAGTTGCACTTGGATGCCTAAGTGCTTCTAACTCCAGGAATGGCTCAAGCGAGACAAACGCCAGCCCTGGAATCCAGGTGC-CCCCTTCCCCTCCAGGAGGTCTGCACCTC s panTro5.chr6 173540219 132 + 175400573 AAAGGAACAACCTCTTTCTGGTTAGTTGCACTTGGATGCCTAAGTGCTTCTAACTCCAGGAATGGCTCAAGCGAGACAAACGCCAGCCCTGGAATCCAGGTGC-CCCCTTCCCCTCCAGGAGGTCTGTACCTC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171778859 132 + 173848474 AAAGGAACAACCTCTTTCTGGTTAGTTGCACTTGGATGCCTAAGTGCTTCTAACTCCAGGAATGGCTCAAGCGAGACAAACGCCAGCCCTGGAATCCAGGTGC-CCCCTTCCCCTCCAGGAGGTCTGCACCTC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11460699 131 - 12463322 AAAGGAACAACCTCTTTCT-GTTAGTTGCACTTGGATGCCTAAGTGCTTCTAACTCAAGGAATGGCTCAAGTGAGACAAACGCCAGCCCTGGAATCCAGGTGC-CCCCTTCCCCTCCAGGAGGTCTGCACCTC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156287317 116 + 157873769 AAAGGAACAACCTCCTTCTGGCTAGTTGCATGTGGATGCCTAAGTGCTTCTAACTCC----------------AGACAAACGCCAGCCCTGGAATCCAGGTGC-CCCCTTCCCGTCCAGGAGGTCTGCACCTC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170314232 132 + 172585720 AAAGGAACAATCTCTTTCTGATAAGTTGCACATGGATGCATCAGCACTTCTAACTCCAGGTATGGCTCAAGTGAGGCAAATGCCAGCCCTGGAATCCAGGTGC-CCCCTTCCCCTCCAGGAGGTCTGCACCTC i rheMac8.chr4 C 0 I 17 s macFas5.chr4 169060066 132 - 170955103 AAAGGAACAATCTCTTTCTGATAAGTTGCACGTGGATGCATCAGCACTTCTAACTCCAGGTATGGCTCAAGTGAGGCAAATGCCAGCCCTGGAATCCAGGTGC-CCCCTTCCCCTCCAGGAGGTCTGCACCTC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8346756 128 + 10161646 AAAGGAACAATC----TCTGATAAGTTGCACGCGGATGCATCAGCACTTCTAACTCCAGGTATGGCTCAAGTGAGGCAAATGCCAGCCCTGGAATCCAGGTGC-CCCCTTCCCCTCCAGGAGGTCTGCACCTC i macNem1.NW_012011000v1 C 0 I 17 s cerAty1.NW_012002071v1 1377458 128 + 3144229 AAAGGAACAATCTCCTTCTGATAAGTTGCAC----ATGCATCAGCATTTCTCACTCCAGGTATGGCTCAAGTGAGGCAAATGCCAGCCCTGGAATCCAGGTGC-CCCCTTCCCCTCCAGGAGGTCTGCACCTC i cerAty1.NW_012002071v1 C 0 I 17 s chlSab2.chr13 96655797 132 + 98384682 AAAGGAACAATCTCCTTCTGATAAGTTGCACGTGGATGCATCAGCACTTCTAACTCCAGGTATGGCTCAAGCGAGGCAAACGCCAGCCCTGGAATCTAGGTGC-CCCCTTCCCCTCCAGGAGGTCTGCACCTC i chlSab2.chr13 C 0 I 7 s manLeu1.NW_012106474v1 8200728 132 - 10857215 AAAGGAACAATCTCCTTCTGATAAGTTGCACATGGATGTATCAGCACTTCTAACTCCAGGTATGGCTCAAGTGAGGCAAATGCCAGCCCTGGAATCCAGGTGC-CCCCTTCCCCTCCAGGAGGTCTGCACCTC i manLeu1.NW_012106474v1 C 0 I 17 s colAng1.NW_012114488v1 15594791 132 - 23502949 AAAGGAACAATCTCCTTCTGGTAAGTTGCACGTGGATGCCTCAGCACTTCTAACTCCAGGCATGGTTCAAGCGAGGCAAATGCCAGCCCTGGAATACAGGTGC-CCCCTTCCCCTCCAGGAGGTCTGCACCTC i colAng1.NW_012114488v1 C 0 I 7 s calJac3.chr4 169864347 128 + 171630274 AAAGGAACAGCCTCCTCCTGCTAAGGTGCACGTGGATGCCTAAATGCTTCCGACCCCAGG-ATGGCTCAAGC-AGGCAAATGCCAGCCCTG--ATCCGGCTGC-CCCCTTCCCCTCCTGGAGGTCTGCCCCTC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1277534 128 - 2905041 AAAGGAGCAGCCTCCTTCTGCTAAGGAGCAGGTGGATGCCTAAATGCTTCTGACTCCAGG-ATGGCTCAAGC-AGGCAAGTGCGAGCCCTG--ATCTGGCTGC-CCCCCTCCCCTCCTGGAGGTCTGCCCCTC i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1234300 128 - 2164891 AAAGGAACAGCCTCCTTCTGCTAAGATGCACGTGGATGCCTAAATGCTTCTGACTCCAGG-ATGGCTCAAGC-AAGCAAATGCCAGCCCTG--ATCAGGCTGC-CCCCTTCCCCTCCTGGAGGTCTGCCCCTC i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1488139 128 - 1813869 AAAGGAACAGCCTCCTTCTGCTAAGGTGGATATGGATGCATAAATGCTTCTGACTCCAGG-ATGGCTCAAAC-AGGCAAATGCCAGCCCTG--ATCCGGCTGC-CCGCTTCCCCTCCTGGAGGTCTGCCCCTC i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10939078 127 - 12073884 AGAGAAATAACCTTTTTCTGAAAACCTG----TGGATGTTTAAGTGGTTCTGATTCCAGGAAGGGCTCCAGTAAGGCACATGGCAGCCCTGGAATAGCAGCAC-CCGTTTTCCCTGCAGGAGGCATG-ACCTC i otoGar3.GL873575 I 1181 C 0 s dasNov3.JH569188 543560 132 + 760995 AGTGTAATAATTTCTTTATGATAAG-TGCATGTGCATGTTTAGATGCCTCTAATTCTAAGAATGGCACAAATGATACAGATGCCAGCCCTAGAATTCAGGATCAACTCTTTGCCTTCAAGAGGTTTAAAGCTC i dasNov3.JH569188 C 0 C 0 e canFam3.chr1 56161027 1683 + 122678785 I a score=240070.000000 s hg38.chr6_KB021644v2_alt 88431 101 + 185823 AGGCTGCCTCTTGGACAGCTAGGAGCAGTGAGAGGGAGGCGTGCACCACACCCAGGCGTGTGGCAGTCCAGA--GGGCTGTCTGTGGCA--------GCTG---------CAAAGATGGC s panTro5.chr6 173540351 101 + 175400573 AGGCTGCCTCTTGGACAGCTAGGAGCAGCGAGAGGGAGGTGTACACCACACCCAGGCATGTGGCAGTCCAGA--GGGCTGTCTGTGGCA--------GCTG---------CAAAGATGGC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171778991 101 + 173848474 AGGCTGCCTCTTGGACAGCTAGGAGCAGCGAGAGGGAGGTGTACACCACACCCAGGCATGTGGCAGTCCAGA--GGGCTGTCTGTGGCA--------GCTG---------CAAAGATGGC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11460830 101 - 12463322 AGGCTGCCTCTTGGACAGCTAGGAGCAGCGAGAGGGAGGTGTGCACCACACCCAGGCGTGTGGCAGTCCAGA--GGGCTGTCTGTGGCA--------GCTG---------CAAAGATGGC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156287433 101 + 157873769 TGGCTGCCTCATGGACAGCTAGGAACAGTGAGAGGGAGGCGTGCACCACCCTCAGGCATGTGGCAGTCCAGA--GGGCTCTCTGTGGCA--------GCTG---------CAAAGATGGC i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169060198 7 - 170955103 --------------------------------------------------------------------------------------------------------------TAATGAT--- i macFas5.chr4 C 0 C 0 s calJac3.chr4 169864475 102 + 171630274 TGGCTGCCATGTGGACAGCTAGGAGCAGTGGCAGGGAGGCGTCCACCACGCCCAGGCACGTGGCCATCCAGAT-AGTCCCGCCGTGGCA--------GCTG---------CAAAGATGAC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1277662 102 - 2905041 TGGCTGCCACATGGACAGCTAGGAGCAGTGGTAGGGAGACATCCACCACGCCCAGGCACATGGCCATCCAGAC-AGTCTTGCTGTGGCA--------GCTG---------CAAAGATGAC i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1234428 102 - 2164891 TGGCTGCCACATGGACAGCTAGGAGCAGTGGTAGGGAGGCGTCCACCACGCCCAGGCATGTGGCCATCCAGAC-GTTCTCGCTGTGGCA--------GCTG---------CAAAGATGAC i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1488267 101 - 1813869 TGGCTGCCACACGGACAGCTAGGAACAGTGGTAGGGAGGCGTCCAGCACGCCCAGGCACGTGGCCATCCAGAC-GGTCTCGCTGTGGCA--------GCTG---------C-AAGATGAC i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10939205 90 - 12073884 TGCTTGCCAC----ACACATAGGA----------------GTGCACCCCACATGGGCTTGGGGCGGCACACT--GGTCTCTCTGCGGAG--------GCTGGGAACATGTGGAAGGTGAC i otoGar3.GL873575 C 0 I 4 s dasNov3.JH569188 543692 107 + 760995 TGGCTGCCACATATACAATTAGTACCAGTACAAGAA----GTGGATTCTATTCAGGCATTTGGCAGTTCCTGCTGAACTCACTGTAACAGGTATGATGTTG---------AAAAGCTGGC i dasNov3.JH569188 C 0 C 0 e colAng1.NW_012114488v1 15594923 7 - 23502949 I e canFam3.chr1 56161027 1683 + 122678785 I e chlSab2.chr13 96655929 7 + 98384682 I e cerAty1.NW_012002071v1 1377586 17 + 3144229 I e manLeu1.NW_012106474v1 8200860 17 - 10857215 I e macNem1.NW_012011000v1 8346884 17 + 10161646 I e rheMac8.chr4 170314364 17 + 172585720 I a score=57824.000000 s hg38.chr6_KB021644v2_alt 88532 9 + 185823 AACCTTACC s panTro5.chr6 173540452 9 + 175400573 AACCTTACC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171779092 9 + 173848474 AACCTTACC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11460931 9 - 12463322 AACCTTACC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156287534 9 + 157873769 AGCCTTACC i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169060205 9 - 170955103 AACCTTACG i macFas5.chr4 C 0 I 1 s chlSab2.chr13 96655936 9 + 98384682 AACCTTACC i chlSab2.chr13 I 7 I 1 s colAng1.NW_012114488v1 15594930 9 - 23502949 AACCTTACC i colAng1.NW_012114488v1 I 7 I 1 s calJac3.chr4 169864577 9 + 171630274 AGCCTTACC i calJac3.chr4 C 0 I 1 s saiBol1.JH378287 1277764 9 - 2905041 AGCCTTACC i saiBol1.JH378287 C 0 I 1 s cebCap1.NW_016107695v1 1234530 9 - 2164891 AGCCTTACC i cebCap1.NW_016107695v1 C 0 I 1 s aotNan1.NW_018494782v1 1488368 9 - 1813869 AGACTTACC i aotNan1.NW_018494782v1 C 0 I 1 s otoGar3.GL873575 10939299 9 - 12073884 AGCTTTAGC i otoGar3.GL873575 I 4 I 1 s dasNov3.JH569188 543799 9 + 760995 AACTTTAGC i dasNov3.JH569188 C 0 C 0 e canFam3.chr1 56161027 1683 + 122678785 I e cerAty1.NW_012002071v1 1377586 17 + 3144229 I e manLeu1.NW_012106474v1 8200860 17 - 10857215 I e macNem1.NW_012011000v1 8346884 17 + 10161646 I e rheMac8.chr4 170314364 17 + 172585720 I a score=5100713.000000 s hg38.chr6_KB021644v2_alt 88541 529 + 185823 GAGAGGCACATGTGCCACTTGAGCTCGAAGCTCGGGGGCACTGTGTGCCTGCTTCGGAGCTCCTGAACACTTAG-GCTCTGTGACTCTCAACGGGACTCAAG--CATTTCTCCTTCGTAGTGGAGTAGCAAACTCGTGTTAAACTAGGCAATGCCTGTTACTAGCTGAAATTTAGTGAAGAAAACCAATTATACACAAGTTTATATATTCCATTAAATATTGCATGAAATAAAATAATGCTTTT---------------------------------------------------TTGGAAGGATAAAATTTCTATATAAATGAAAAACAGTGGGGATACTTGGGATAAAAA----GTGGTCAAAGCCCTAAATATCCATCACCCAGTCCAGTTCAGTGCATGCCCTCTAGAATATTCCAGATTATGATTTATGTaaccttt-tatgtaaacagtaag---atagtgtttcaggccttgcaagccatatggtctcaggtttacctactgaattttgtcaacgtaaatcacaacaaatcataga--attcgtaaataaataagcatagcta---tgctccaatcaaactttattttt s panTro5.chr6 173540461 529 + 175400573 GAGAGGCACACGTGCCACTTGAGCTCAAAGCTTGGGGGCACTGTGTGCCTGCTTCGGAGCTCCTGAAGACTTAG-GCTCTGTGACTCTCAATGGGACTCAAG--CATTTCTCCTTCGTAGTGGAGGAGCAAACTCGTGTTAAACTAGGCAATGCCTGTTACTAGCTGAAATTTAGTGAAGAAAACCAATTATACACAAGTTTATATATTCCATTAAATATTGCATGAAATAAAATAATGCTTTT---------------------------------------------------TTGGAAGGATAAAATTTCTATATAAATGAAAAACAGTGGGGATACTTGGGATAAAAA----GTGGTCAAAGCCCTAAATATCCATCACCCAGTCCAGTTCAGTGCATGCCCTCTAGAATATTCCAGATTATGATTTATGTaaccttt-tatgtaaacagtaag---atagtatttcaggccttgcaagccatatggtctcaggtttacctactgaattttgtcaacgtaaatcacaacaaatcataga--attcgtaaataaatgagcatagctg---tgctccaatcaaactttattttt i panTro5.chr6 C 0 C 0 s panPan2.chr6 171779101 529 + 173848474 GAGAGGCACACGTGCCACTTGAGCTCAAAGCTTGGGGGCACTGTGTGCCTGCTTCGGAGCTCCTGAAGACTTAG-GCTCTGTGACTCTCAATGGGACTCAAG--CATATCTCCTTCGTAGTGGAGGAGCAAACTCGTGTTAAACTAGGCAATGCCTGTTACTAGCTGAAATTTAGTGAAGAAAACCAATTATACACAAGTTTATATATTCCATTAAATATTGCATGAAATAAAATAATGCTTTT---------------------------------------------------TTGGAAGGATAAAATTTCTATATAAATGAAAAACAGTGGGGGTACTTGGGATAAAAA----GTGGTCAAAGCCCTAAATATCCATCACCCAGTCCAGTTCAGTGCATGCCCTCTAGAATATTCCAGATTATGATTTATGTaaccttt-tatgtaaacagtaag---atagtatttcaggccttgcaagccatatggtctcaggtttacctactgaattttgtcaacgtaaatcacaacaaatcataga--attcgtaaataaatgagcatagctg---tgctccaatcaaactttattttt i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11460940 528 - 12463322 GAGAGGCACACGTGCCACTTGAGCTCAAAGCTCGGGGGCACTGTGTGCCTGCTTCGGAGCTCCTGAACACTTAG-GCTCTGCGACTCTCAACGGGACTCAAG--CATTTCTCCTTCGTAGTGGAGTAGCAAACTCGTGTTAAACTAGGCAATGCCTGTTACTAGCTGAAATTTAGTGAAGAAAACCAATTATACACAAGTTTATATATTCCATTAAATATTGCATGAAATAAAATAATGCTTTT---------------------------------------------------TGGGAAGGATAAAATTTCTATATAAATGAAAAACAGT-GGGATACTTGGGATAAAAA----GTGGTCAAAGCCCTAAATATCCATCACCCAGTCCAGTTCAGTGCATGCCCTCTAGAATATTCCAGATTATGATTTATGTaaccttt-tatgtaaacagtaag---atagtatttcaggccttgcaagccatatggtctcaggtttacctactgaattttgtcatcgtaaatcacaacaaatcataga--attcgtaaataaataagcatagcta---tgctccaatcaaactttattttt i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156287543 523 + 157873769 GAGAGGCACACGTGCCACTTGAACTCAAAGCTCGGGGGCACTGTGTGCCTGCTTCAGAGCTCCTGAACACTTAG-GCTCTGTGACTCTCAACGGGACTCAAG--CATTTCTCCTTCGTGGTGGAGTAGCAAACTCGTGTTAAACTAGGCAGTGCCTGTTACTAGCCGAAATTTAGTGAAGAAAACCAACTATACGCAAGTTTATATATTCCGTTAAATATTGCATGAAATAAAATAATGCTTTT---------------------------------------------------TTGGAAGGATAAAGTTTCTACAGAAATGAAAAAC--TGGTGATACTTGGGATAAAAA----GTGGTCAAAGCCCTGAATATCTATCACCCAGTCTAGTTCAGTACATGCCCTTTAGAATATTCCAGATTATGATTTATGTaatcttt-tatgtaaacagtaag---atagtatttcaggccttgcaagccatatggtctcaggtttacctactgaattttgtcaccgtaaatcacaacaaatcataga--attc----ataaataagcacagcta---tgctccaatcaaactttattttt i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170314381 529 + 172585720 GAGAGGTGCACGTGCCAGTTGAACTCAGAGCTCGGGGGCCCCGTGTGCGTGCTTCGGAGCTACTGAACACTTAG-GCTCTGTGACTCTCAATGGGACTCAAG--CATTTCTCCTTCGTAGTAGAGTAGCAAACTCATGTTAAACTAGGCAATGCCTGTTACTAGCTGAAATTTAGTGAAGAAAACCAATTATACGCAACTTTATATATTCCATTAAATATTGCATGAAATAAAATAATGCTTTT---------------------------------------------------TTGGAAGGATAAAGTTCCTATATAAATGAAAAACAATGGTGATACTTGGGATTAAAA----GTGGTCAAAGCCCTAAATATCCATCACCCAGTCTAGCTCAGTACATGCCCTTTAGAATATTCCAGATTATGATTTATTTACTCTTT-TATGTAAACAATAAG---ATAGTATTTCAGATCTTGCAAGCCATATGGTCTCAGGTTTAACTACTGAATTTTGTCAATATAAATCACAACAAATCATAGA--ATTCATATATAAATAAGCACAGCTA---TGCTCCAATCAAACTTTTTAAAA i rheMac8.chr4 I 17 C 0 s macFas5.chr4 169060215 529 - 170955103 GAGAGGTGCACGTGCCAGTTGAACTCAGAGCTCGGGGGCCCCGTGTGCGTGCTTCGGAGCTACTGAACACTTAG-GCTCTGTGACTCTCAATGGGACTCAAG--CATTTCTCCTTCATAGTAGAGTAGCAAACTCATGTTAAACTAGGCAATGCCTGTTACTAGCTGAAATTTAGTGAAGAAAACCAATTATACGCAACTTTATATATTCCATTAAATATTGCATGAAATAAAATAATGCTTTT---------------------------------------------------TTGGAAGGATAAAGTTCCTATATAAATGAAAAACAATGGTGATACTTGGGATTAAAA----GTGGTCAAAGCCCTAAATATCCATCACCCAGTCTAGCTCAGTACATGCCCTTTAGAATATTCCAGATTATGATTTATTTACTCTTT-TATGTAAACAATAAG---ATAGTATTTCAGGTCTTGCAAGCCATATGGTCTCAGGTTTAACTACTGAATTTTGTCAATATAAATCACAACAAATCATAGA--ATTCATATATAAATAAGCACAGCTA---TGCTCCAATCAAACTTTTTAAAA i macFas5.chr4 I 1 C 0 s macNem1.NW_012011000v1 8346901 529 + 10161646 GAGAGGTGCACGTGCCAGTTGAACTCAGAGCTCGGGGGCCCCGTGTGCGTGCTTCGGAGCTACTGAACACTTAG-GCTCTGTGACTCTCAATGGGACTCAAG--CATTTCTCCTTCGTAGTAGAGTAGCAAACTCATGTTAAACTAGGCAATGCCTGTTACTAGCTGAAATTTAGTGAAGAAAACCAATTATACGCAACTTTATATATTCCATTAAATATTGCATGAAATAAAATAATGCTTTT---------------------------------------------------TTGGAAGGATAAAGTTCCTATATAAATGAAAAACAATGGTGATACTTGGGATTAAAA----GTGGTCAAAGCCCTAAATATCCATCACCCAGTCTAGCTCAGTACATGCCCTTTAGAATATTCCAGATTATGATTTATTTACTCttt-tatgtaaacagtaag---atagtatttcaggtcttgcaagccatatggtctcaggtttaactactgaattttgtcaatataaatcacaacaaatcataga--attcatacataaataagcacagcta---tgctccaatcaaacttttttaaa i macNem1.NW_012011000v1 I 17 C 0 s cerAty1.NW_012002071v1 1377603 528 + 3144229 GAGAGGTGCACGTGCCAGTTGAACTCAGAGCTCGGGGGCCCCGTGTGC-CGCTTCGGAGCTACTGAACACTTAG-GCTCTGTGACTCTCAATGGGACTCAAG--CATTTCTCCTTCGTAGTAGAGTAGCAAACTCATGTTAAACTAGGCAATGCCTGTTACTAGCTGAAATTTAGTGAAGAAAACCAATTATACACAACTTTATATATTCCATTAAATATTGCATGAAATAAAATAATGCTTTT---------------------------------------------------TTGGAAGGATAAAGTTCCTATGTAAATGAAAAACAATGGTGATACTTGGGATTAAAA----GTGGTCAAAGCCCTAAATATCCATCACCCAGTCTAGTTCAGTACATGCCCTTTAGAATATTCCAGATTATGATTTATTTACTCTTT-TATGTAAACAATAAG---ATAGTATTTCAGGTCTTGCAAGCCATATGGTCTCAGGTTTAACTACTGAATTTTGTCAATATAAATCACAACAAATCATATA--ATTCATATATAAATAAGCACAGCTA---TGCTCCAATCAAACTTTTTTAAA i cerAty1.NW_012002071v1 I 17 C 0 s chlSab2.chr13 96655946 525 + 98384682 GAGAGGTGCACGTGCCACTTGAACTTGAAGCTCGGGGGCCCCGTGTGCGTGCTTCGGAGCTACTGAACACTTAG-GCTCTGTGACTCTCAATGGGACTCAAG--CATTT---CTTCGTAGTAGAGTAGCAAACTCATGTTAAACTAGGCAATGCCTGTTACTAGCTGAAATTTAGTGAAGAAAACCAATTATACGCAACTTTATATATTCCATTAAATATTGCATGAAATAACATAATGCTTTT---------------------------------------------------TTGGAAGGATAAAGTTTCTATGTCAATGAAAAACAATGGTGATACTTGGGATTAAAA----GTGGTCAAAGCCCTAAATATCCATCACCCAGTCTAGTTCAGTATATGCCCTTTAGAATATTCCAGATTATGATTTATTTACTCttt-tatgtaaacaataag---atagtatttcaggccttgtaagccgtatggtc-caggtataactactgaattttgtcaatataaatcacaacaaatcattga--attcataagtaaataagcacagcta---tgctccaatcaaactttcttttt i chlSab2.chr13 I 1 C 0 s manLeu1.NW_012106474v1 8200877 529 - 10857215 GAGAGGTGCACGTGCCAGTTGAACTCAGAGCTCGGGGGCCCCGTGTGCGTGCTTCGGAGCTACTGAACACTTAG-GCTCTGTGACTCTCAATGGGACTCAAG--CATTTCTCCTTCGTAGTAGAGTAGCAAACTCATGTTAAATTAGGCAATGCCTGTTACTAGCTGAAATTTAGTGAAGAAAACCAATTATACACAACTTTATATATTCCATTAAATATTGCATGAAATAAAATAATGCTTTT---------------------------------------------------TTGGAAGGATAAAGTTCCTATGTAAATGAAAAGCAACGGTGATACTTGGGATTAAAA----GTGGTCAAAGCCCTAAATATCCATCACCCAGTCTAGTTCAGTACATGCCCTTTAGAATATTCCAGATTATGATTTATTTACTCttt-tatgtaaacaataag---atagtatttcaggtcttgcaagccatatggtctcaggtttaaccactgaattttgtcaatataaatcacaacaaatcatata--attcatataaaaataagcacagcta---tgctccaatcaaacttttttaaa i manLeu1.NW_012106474v1 I 17 C 0 s colAng1.NW_012114488v1 15594940 529 - 23502949 GAGAGGTGCACGTGCCACTTGAACTCGAAGCTCAGGGGCCCCGTGTGCGTGCTTCGGAGCTGCTGAACACTTAG-GCTCTGTGACTCTCAATGGCACTCAAG--CGTTTCTCCTTCGTAGTAGAGTAGCACACTCATGTTAAACTAGGCAATGCCTGTTACTAGCTGAAATTTAGTGAAGAAAACCAATTATACACAACTTTATATACTCCATTAAATATTGCATGAAATAAAATAATGCTTTT---------------------------------------------------TTGGAAGGATAAACTTTCTATGTCAATGAAAAACAATGGTGATACTTGGGATGAAAA----GTGGTCAAAGCCCTAAATATCCATCACCCAGTCTAGTTCAGTACGTGCCCTTTAGAATATTCCAGATTATGATTTATTTACTCttt-tatgtaaacaataag---atagtatttcaggccttgcaagccatatggcctcaggtttaactactgaattttgtcaatataaatcacaacaaatcgtaga--attcataaataaataagcacagcta---tgctccaatcaaacttttttttt i colAng1.NW_012114488v1 I 1 C 0 s calJac3.chr4 169864587 459 + 171630274 AAGAGGCGCACGTGCCGCTGGAACTCAGAG----------------------CTCGGGGCTCCTGAACGCTCA-----CCGCGACTCTTGAGGGGACGCAAG--CATTTCTCTCTCTTACTGGAGCAGCAAACTTGTGTTAAACC-AGCAATGCCTGTTAGTAGCTGAAATTT-GTGAAGAAAACAAATTATATGCGAGTATATATAGTCCATCAAATGTTGCAT-AAATGAAATAATGCTTTT---------------------------------------------------TTGGAAGGATAAAGTCTCTATGTAAATGAA----AATGGTGACACTTGGGATAAACA----GTGATCAAAT-------------------------------------CCCTTTAGAATATTCCAGATTACGGTTTATATGaccttt-tatgtaaacagtaag---atagcatttcaggccttgcaagccatatggtctcaggtttagctactgaattttttcaacacaaatcgcagcaaatcacaga--aaacataaataaataaacgcagctg---tactccaaccaaacttCGCtttt i calJac3.chr4 I 1 C 0 s saiBol1.JH378287 1277774 524 - 2905041 AAGAGGCACACATGCCACTGGAACTCAGAGCTCA-GGGCGCTGTGTGCATGCCTCAGGGCTCCTGAACACTCA-----CTATGAGTCTCAAGGGGATGCAAG--CATCTCTCTCTCATAGTGGAGCAGCAAACTTGTGTTAAACCGGGCAATGCCTGTTAGTAGCTGAAATTTAGTGAAGAAAACAAATTATATGCAAGTTTACATATTCCATTAAATGTTGCATGAAATAAAATAATATTTTT---------------------------------------------------TTGGAAGGATAAAGTCTCTATGTAAATGAAAAACAATGGTGACACTTGGAATAAACA----GTGTTCAAATCCCTAAATATCCAGAACCCAGTCTAGTTCAGCACATGCCCTTTTGAATATTCCAGATTATGGTTTATATaaccttt-tatgtaaacaataag---atagcatttcaggccttgcaagccatatagtctcaggtttagctactgaattttgtcaacacaaatcatggcaaatcataga--aaacataaataaataaacacagcta---tactccaatcaaagtttgttttt i saiBol1.JH378287 I 1 C 0 s cebCap1.NW_016107695v1 1234540 524 - 2164891 AAGAGGCGCACGTGCCACTGGAACTCAGAGCTCA-AGGCACCGTGTGCATGCCTCAGGGCTCCTGAACACTCA-----CTATGAGTCTCAAGGGGATGCAAG--CATTTCTTTCTCATAGTGGAGCAGCAAACTTGTGTTCAACCGAGCAATGCCTATTAGTAGCTGAAATTTAGTGAAGGAAACAAGTTATATGCAAGTTTACATATTCCATTAAATGTTGCATGAAATAAAATAATGCTTTT---------------------------------------------------TTGGAAGGATAAAGTCTCTATGTAAATGAAAAACAATGGTGACACTTGGGATAAACA----GTGATCAAATCCCTAAATATCCAGAATCCAGTCTAGTTCAGTACATGCCCTTTAGAATATTCTAGATTATGGTTTATATAACCTTT-TATGTAAACAATAAG---GTAGCATTTCAGGCCTCGCACGCCATATGGTCTCAGGTTTAGCTACTGAATTTTGTCAACATGAATCACGGCAAATCATAGA--AAACATAAATAAATAAACACAGCTA---TATGCCAATCAAACtttgttttt i cebCap1.NW_016107695v1 I 1 C 0 s aotNan1.NW_018494782v1 1488378 518 - 1813869 AGGAGGCGCACGTGCCACAGGAACTCAGAGCTCA-GGGCGCCGCGTGCATGCCTCAGGGCTCCTGAACACTTA-----C--TGAGTCTCAAGGGGACGCAAG--CATCTCCCTCTCATAGTGGAGCAGCAAACTTGTGTTAAACCAGGCAATGCCCGTTAGTAGCTGAAATTTAGTGAAGAAAACAAATTACATGCAAGTTTACATATTCCATTAAATGTTGCATGAAATAAAATAATGCTTTT---------------------------------------------------TTGGAAGGATAAAGTTTCTGTTTAAATGAA-AACAATGGTGACACTTGGGATAAACA----GTGATCAAATCCCTAAATATCCAGAACGCAGTCTAGTTCAGCA---GCCCTTTAGAATGTTCCAGATTATGGTTTATATaaccttt-tatgtaaacaataag---atagcatttcagcccttgcaagccatatggtctcaggtttagctactgaattttgtcaacacaaatcacggcaaatcataga--aaatataaataaataaacacagcta---tactccaatcaaactttgttttt i aotNan1.NW_018494782v1 I 1 C 0 s otoGar3.GL873575 10939309 496 - 12073884 GAGAGGCTCTCCAGCCGCCAGGACTCTCAGCACACGGGCACCATGCAAGCATTTGCAGGCTCTGGAACACTTAA-AAGTACTGACTTTCTGTAGGAGACAAGCCCATTTCTCTTCAATGG-----------------GCT-------GTAATGACTGTTAATAGCTGAAACCCAGTGAAGGAAACAAATTGTATGCAAGTTCGTGTATTCCATCAAACATTGCAATAAATAAAACATTGCTTTT---------------------------------------------------CT-GAAAAATGGATTTTACATTTAAATAGAAAATAATGGTGGTCTTTGTGATAAAAA----GGCATTAAAGCCCTGAATAGCCAT--CCCCATGTGGTTTGGGACC--CCAGTTAGAGGCCTCTAGACT--GGCACATGCAACTTCT-TATGCAAG----AAG---ATGA---tttaggtcttagaag--acgtggtctctgttggaactcctggattttatcaacataattcacaagaagccgtagaccaagtgtaaatatgtgaccgtggtgatgttgttccaataaaactctttttTC i otoGar3.GL873575 I 1 C 0 s dasNov3.JH569188 543808 563 + 760995 CAGAAGCTAAGGTGTCACTTCACCTAAAGTACTAGGGGCACTATGTATATATTTTGAGGCTTTTCAACATTTAATTCACTGTAATTCACAA--GGATACAAA--CTTTTTTAA--AATGGTGGGTTAAGAAACCAGCTTTAAACTAGGAAATGACTCTTAAC-----AAATTTATTAAAGGAAATATATTATACCTGGGTCTCTGCATTTCTTTAAATATTGCATTAAATGACATGATGCTTTTAGGCACAAAAACGCTATTAATGATGATTAGTTTATACTCATGTTATCAACCTTTGAAAGATAAAGTTTACTTACAAATGGAAAAAAACAGTGTTAGTTATGATTAAAAAAATATAATTA---TTCTTGATATC---------------TTCAGTATATTACCTTTAGAATCTATCAGAGcaggggttggctaatttttccctttaaagggtcagagaataatattttagtctttacagccaggatgatcttt-ctgtaattaatcaattctgtcattgtagctcaaaagcatctgtagataacacataaatgaatggacatagtta---tattccagtgaaagctgatttat i dasNov3.JH569188 C 0 C 0 e canFam3.chr1 56161027 1683 + 122678785 I a score=22800.000000 s hg38.chr6_KB021644v2_alt 89070 2 + 185823 at s panTro5.chr6 173540990 2 + 175400573 at i panTro5.chr6 C 0 C 0 s panPan2.chr6 171779630 2 + 173848474 at i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11461468 2 - 12463322 at i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156288066 2 + 157873769 at i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170314910 2 + 172585720 At i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169060744 2 - 170955103 At i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8347430 2 + 10161646 at i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1378131 2 + 3144229 At i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96656471 2 + 98384682 at i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8201406 2 - 10857215 at i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15595469 2 - 23502949 at i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169865046 2 + 171630274 at i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1278298 2 - 2905041 gt i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1235064 2 - 2164891 at i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1488896 2 - 1813869 at i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10939805 2 - 12073884 AT i otoGar3.GL873575 C 0 I 3 e dasNov3.JH569188 544371 0 + 760995 C e canFam3.chr1 56161027 1683 + 122678785 I a score=2870784.000000 s hg38.chr6_KB021644v2_alt 89072 315 + 185823 -----ttttttgagacaaggtctcactctgtctcccaggttggagtgcagtggcctgatcatggctcacagtagcttcaagctcctggtctcaagcaatcctcccacctcagctgggactacaggcatgtgtcaccatacctggctaatattttttattttttgtagagaagttttctcattatctcactatgttggccaggc--------------tagtctcaaattcatgggcttaagcaatccttccacctcagcctctcaaagtatttgggattacaagtgtgagctactgtgcccagctaaaactttatttaa--------aaacaTACAAAAAT-A s panTro5.chr6 173540992 316 + 175400573 -----ttttttgagacaaggtctcactctgtctcccaggttggagtgcagtggcctgatcatggctcacagtagcttcaagctcctggtctcaagcaatcctcccacctcagctgggactacaggcatgtgtcaccatacctggctaatattttttattttttgtagagaagttttctcattatctcactatgttggccaggc--------------tagtctcaaattcatgggcttaagcaatccttccacctcagcctctcaaagtatttgggattacaagtgtgagctactgtgcccagctaaaactttatttaa--------aaacaTACAAAAATAA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171779632 315 + 173848474 -----ttttttgagacaaggtctcactctgtctcccaggttggagtgcagtggcctgatcatggctcacagtagcttcaagctcctggtctcaagcaatcctcccacctcagctggggctacaggcatgtgtcaccatacctggctaatattttttattttttgtagagaagttttctcattatctcactatgttggccaggc--------------tagtctcaaattcatgggcttaagcaatccttccacctcagcctctcaaagtatttgggattacaagtgtgagctactgtgcccagctaaaactttatttaa--------aaacaTACAAAAAT-A i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11461470 316 - 12463322 -----ttttttgagacaaggtctcactctgtctcccaggttggagtgcagtggcctgatcatggctcacagtagcttcaagctcctggtctcaagcaatcttcccacctcagctgggactacaggcatgtgtcaccatacctggctaatattttttatgttttgtagagaagttttctcattatctcactatgttggccaggc--------------tagtctcaaattcatgggcttaagcaatccttccacctcagcctcccaaagtatttgggattacaagtgcgagctactgtgcccagctaaaactttatttaa--------aaacaTACAAAAATAA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156288068 314 + 157873769 -----ttttttgagacaaggtctcactctgtctcccaggttggagtgcagtggcttgatcatggctgacagtagcttcaagctcctggactcaagcaatcctcccgcctcatctgggactataggcatgtgccaccatacctggctaatattttttattttttgtagagaaggtgtctcactatctcactatgttggccaggc--------------tagtctcaaattcacgggcttaagcaatccttccacctcagcctcccaaagtatttgggattacaagtgtgagctattgtgcccagctaaaactttatttaa--------aaacaAACAACAAT-- i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170314912 313 + 172585720 -----ttttttgagacaaggtctcactctgtctcccgggttggagtgcagtggcctggtcatggctcacagtagtttcaagttcctggactcaagtaatcctcctgcctcagctgggactacaggcatgtgccaccatgcctggctaatatgttttat-ttttgtagagagggtgtctcaccatctcactgtattggccaggc--------------tagtctcaaattcatggactcaagcaatcctaccacctcagcctagcaaagtatttggtattacaagtgtgagctactatgcccagcTAAAACTTTATTTAA--------AAACAAACAGTAAT-- i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169060746 313 - 170955103 -----ttttttgagacaaggtctcattctgtctcccgggttggagtgcagtggcctggtcatggctcacagtagtttcaagttcctggactcaagtaatcctcctgcctcagctgggactacaggcatgtgccaccatgcctggctaatatgttttat-ttttgtagagagggtgtctcaccatctcactgtattggccaggc--------------tagtctcaaattcatggactcaagcaatcctaccacctcagcctaccaaagtatttggtattacaagtgtgagctactgtgcccagcTAAAACTTTATTTAA--------AAACAAACAGTAAT-- i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8347432 313 + 10161646 -----ttttttgagacaaggtctcactctgtctcccaggttggagtgcagtggcctggtcatggctcacagtagtttcaagtttctggactcaagtaatcctcctgcctcagctgggactacaggcatgtgccaccatgcctggctaatatgttttat-ttttgtagagagggtgtctcaccatctcactgtattggccaggc--------------tagtctcaaattcatggactcaagcaatcctaccacctcagcctaccaaagtatttggtattacaagtgtgagctactgtgcccagctaaaactttatttaa--------aaacaaacagTAAT-- i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1378133 317 + 3144229 -----ttttttgagacaaggtctcactctgtctcctggattggagtgcagtggcctggtcatggctcacagtagtttcaagttcctggactcaagtaatcctcctgcctcagctgggactacaggcatgtgccaccgtgcctggctaatatgttttat-ttttgtagagagggtgtctcaccatctcaccgtattgaccaggc--------------tagtctcaaattcatgggctcaagcaatcctaccccctcagcctctcaaagtatttggtattacaagtgtgagctactgtgcccagcTAAAACTTTATTTAAAAA----CAAACAAACAGCAAT-- i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96656473 313 + 98384682 -----ttttttgagacaaggtctcactctgtctcccaggttggagtgcagtggcctggtcatggctcacagtagcttcaagctcctggactcaagtaatcctcctgcctcagctgggactacaggcatgtgccaccgtgcctggctaatatgttttat-ttttgtagagagggtgtctcaccatctcactctattggccaggc--------------tagtctcaaattcatgggctcaagcaatcctaccacctcagcctcccaaagtatttggtattacaagtgtgagctactgtgccaagctaaaactttatttaa--------aaacaaacagTAAT-- i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8201408 317 - 10857215 -----ttttttgagacgaggtctcactctgtctcctggtttggagtgcagtggcctggtcatggctcacagtagtttcaagttcctggactcaagtaatcctcctgcctcagctgggactacaggcatgtgccaccgtgcctggctaatatgttttat-ttttgtagagagggtgtctcaccatctcaccgtattgaccaggc--------------tagtctcaaattcatgggctcaagcaatcctaccccctcagcctctcaaagtatttggtattacaagtgtgagctactgtgcccagctaaaactttatttaaaaa----caaacaaacagcAAT-- i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15595471 317 - 23502949 -----ttttttgagacaaggtctcactctgtctcccagattggagtgcagtggcctggtcatggctcacagtagcttcaagctcctggactcaagtaatcctcctgcctcagctgggactacaggcatgtgccaccgtgcctggctaatatgttttat-ttttgtagagagggtgtctcaccatctcactgtattggccaggc--------------gagtctcaaattcatgggctcaagcaatcctaccacctcagcctcccaaagtatttggtattacaagtgtgagctactgtgccgggctaaaactttatttaaaaa----caaacaaacggcAAT-- i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169865048 326 + 171630274 ttttattttttgagacaaggtctcactgtgtctctcaggttggagtgcagtggcctgatcatggctcagagtagcctcaagctcctgggcccaagtcatcctcctcccccagctgggcctacaggcatgtgccaccatgcctggccaacatggtttctatttggtagagagggtgtctcactatctcactatgttggccaggc--------------tagtgtcaaattcttgggctcaagcaatccttccacctcagcctcccaaagc-cttgggattacaagtgccaggtgctgcgtgcggcTACAACTTTATTTAAAAAGAAGCCAACAAACAACAGT-- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1278300 326 - 2905041 ttttattttttgagacaaggtctcactgtgtctcccaggttggagtgcagtggcctgatcgtggctcaaattagcctcaagctcctgggctcaagtaatcctcctcccccagccgggcccacaggcgtgtgccaccatgcctggccaatacattttcctttttgtagagagggtgtctcactatctcactatggtggccaggc--------------tagtctcaaattcctgggctcaagcaatccttccacctcagcctcccaaagc-cttgggattacaagtgcgagctgctgcgcccagctaaaactttatttagaaacaagcCAACAAGCAACAAT-- i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1235066 316 - 2164891 ttttattttttgagacaagttctccctgtgtctcccaggttggagtgcagtggcctgatcatggctcaaagtagcctcaagctcctgggctccagtaatcctcctcccccagctgggcctgcaggcatgtgccaccatgcctggccaatacgttttcctttttgtagagagagtgtctcagtatctcactatgttggccaggc--------------tcgtctcaaattcttgggctcaagcaaccctaccaccttagcctcccaaagc-cttgggatgacaagtgcaagctgctgc----------AACTTCATTTAAaaacaaaccaacaaacaacaat-- i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1488898 340 - 1813869 ttttattttttgagacaaggtctcactgtgtctcccaggttggagtgcagtggcgtgatcatggctcagagtagcctcaagctcctgggctcaagtaatcctcctccccgagctgggcctacaggcgtgtgccaccatgcctggccagtatgttttcctttttgtagaaagggtgtctcactatctcactatgttggccagacataacaagtgggttatgtctcaaattcttgggctcaagcaatccttccacctcagcctctcaaagc-cttgggattacgagtgcaagctgctgtgcccagctaaaactttatttaaaaacaagcCAACAGACAACACT-- i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10939807 3 - 12073884 I e dasNov3.JH569188 544371 0 + 760995 C e canFam3.chr1 56161027 1683 + 122678785 I a score=102676.000000 s hg38.chr6_KB021644v2_alt 89387 19 + 185823 AAAAAAATCCACAGGCAGC s panTro5.chr6 173541308 19 + 175400573 AAAAAAATCCACAGGCAGC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171779947 19 + 173848474 AAAAAAATCCACAGGCAGC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11461786 19 - 12463322 AAAAAAATCCACAGGCAGC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156288382 19 + 157873769 AAAAAAATCCACAGGCAGC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170315225 19 + 172585720 AACAAAATCCACAGGCAAC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169061059 19 - 170955103 AACAAAATTCACAGGCAAC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8347745 19 + 10161646 AACAAAATCCACAGGCAAC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1378450 19 + 3144229 AACAAAATCCACAGGCAAC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96656786 19 + 98384682 AACAAAATCCACAGGCAAC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8201725 19 - 10857215 AACAAAATCCACAGGCAAC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15595788 19 - 23502949 AACAAAATCCACAGGCAAC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169865374 16 + 171630274 AA-GAAACCC--CGGCAGC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1278626 10 - 2905041 ----AAACCC-----CCGC i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1235382 14 - 2164891 aa--aaacCC---GGCAGC i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1489238 16 - 1813869 AA--AAACCT-CCGGCAGC i aotNan1.NW_018494782v1 C 0 C 0 s dasNov3.JH569188 544371 14 + 760995 aaaaacagccactc----- i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10939807 3 - 12073884 I e canFam3.chr1 56161027 1683 + 122678785 I a score=1625569.000000 s hg38.chr6_KB021644v2_alt 89406 157 + 185823 AGCCCAT-AGCCT-TGCTTTGCTTAAACCTTTCCTAGTTAAGAACTTTTTGACTGAGAAGGCTGTAGCTTCAAA--ATCCAAAAATTTATTCTCAAAATCTAGATGATTGAGTTTGACCATATGTTTTCCTAAAGCAGATGAGTGGATTTAATAAAATAGC s panTro5.chr6 173541327 157 + 175400573 AGCCCAT-AGCCT-TGCTTTGCTTAAACCTTTCCTAGTTAAGAACTTTTTGACTGAGAAGGCTGTAACTTCAAA--ATCCAAAAATTTATTCTCAAAATCTAGATGACTGAGTTTGACCATATGTTTTCCTAAAGCAGATGAGTGGATTTAATAAAATAGC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171779966 157 + 173848474 AGCCCAT-AGCCT-TGCTTTGCTTAAACCTTTCCTAGTTAAGAACTTTTTGACTGAGAAGGCTGGAACTTCAAA--ATCCAAAAATTTATTCTCAAAATCTAGATGATTGAGTTTGACCATATGTTTTCCTAAAGCAGATGAGTGGATTTAATAAAATAGC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11461805 157 - 12463322 AACCCAT-AGCCT-TGCTTTGCTTAAACCTTTCCTAGTTAAGAACTTTTTGACTGAGAAGGCTGTAGCTTCAAA--ATCCAAAAATTTATTCTGAAAATCTAGATGATTGAGTTTGACCATATGTTTTCCTAAAGCAGATGAGTGGATTTAATAAAATAGC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156288401 157 + 157873769 AACCCAT-AGCCT-TGCTTTGCTTAAAACTTTCCTAGTTAAGAGCTTGTTGACTGAGAAGGCTGTAGCTTCAAA--ATTCCAAAATTTATTCTCAAAATCTAGATGGTTGAGTTTGACCATATGTTTTCCTATAGCAGATGAGTGGATTTAATAAAACAGC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170315244 156 + 172585720 AGCCCAT-AGCCT-TGCTTTGTTTAAACCTTTCCTAGTTAAGAACTTTTTGACTGAGAAGGCTATAGCTCCAAA--ATCCAAAAACTTATTCTCAAAATCT-GGTGATTGACTTTGACCATATGTTTTCCTAAAGCagatgagtggatttaataaaatagc i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169061078 156 - 170955103 AGCCCAT-AGCCT-TGCTTTGTTTAAACCTTTCCTAGTTAAGAACTTTTTGACTGAGAAGGCTATAGCTCCAAA--ATCCAAAAATTTATTCTCAAAATCT-GGCGATTGACTTTGACCATATGTTTTCCTAAAGCAGATGagtggatttaataaaatagc i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8347764 156 + 10161646 AGCCCAT-AGCCT-TGCTTTGTTTAAACCTTTCCTAGTTAAGAACTTTTTGACTGAGAAGGCTATAGCTCCAAA--ATCCAAAAATTTATTCTCAAAATCT-GGTGATTGACTTTGACCATATGTTTTCCTAAAGCAGATGAGTGGATTTAATAAAATAGC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1378469 156 + 3144229 AGCCCAT-AGCCT-TGCTTTGTTTAAACCTTTCCTAGTTAAGAACTTTTTGACTGAGAAGGCTATAGCTTCAAA--ATCCAAAAATTTATTCTCAAAATCT-GGTGATTGAGTTTGACCATATGTTTTCCTAAAGCAGatgagtggatttaataaaatagc i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96656805 156 + 98384682 AGCCCAT-AGCCT-TGCTTTGCTTAAACCTTTCCTAGTTAACAACTTTTTGACTGAGAAGGCTATAGCTCCAAA--ATCCAAAAATTTATTCTCAAAATCT-GGTGATTGAGTTTGACCATATGTTTTCCTAAAGCAGatgagtggatttaataaaatagc i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8201744 156 - 10857215 AGCCCAT-AGCCT-TGCTTTGTTTAAACCTTTCCTAGTTAAGAACTTTTTGACTGAGAAGGCTATAGCTTCAAA--ATCCAAAAATTTATTCTCAAAATCT-GGTGATTGAGTTTGACCATATGTTTTCCTAAAGCagatgagtggatttaataaaatagc i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15595807 156 - 23502949 AGCCCAT-AGCCT-TGCTTTGCTTAAACCTTTCCTAGTTAAGAACTTTTTGATTGAGAAGGTTATAGCTTCAAA--ATACAAAAATTTATTCTCAAAATCT-GGTGATTGAGTTTGACCATATGTTTTCCTAAAGCagacgagtggatttaataaaatagc i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169865390 154 + 171630274 AGCCCAT-GGCCT-TGCTCCACTTATGCCTTTCCTAGTTAAGAACTTCTTCACTGAGAAGGCTTTAGCTTCAAAACATAGT---ATTGATTCTCAAAGTCTGGATGATTGACTCTGACCA--TGTTTTCCTaaagcagatgagtgaatttaataaaacagc i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1278636 154 - 2905041 AGCCCGT-AGCCT-TGTTCTGCTTATACCTTTCCTAGTTAAGAACTTCTTCACTGAGAAGGCTTTAGCTTCAAA--ATCCT---ATTTATTCTCAAAAGCTAGATGATTGAGTTTGACCATGTGTTTTCCTAAAGCAGatgagtgaatttaataaaacagc i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1235396 154 - 2164891 AGCCCGC-AGCCT-TGCTCCACTTATACCTTTCCTAGTTAAGAACTTTTTCACTGAGAAGGCTTTAGCTTCAAA--ATCCT---ATTTATTCTCAAAATCTAGCTGATTGAGTTTGACCATATGTTTTCCTAAAGCAGatgagtgaatttaataaaatagc i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1489254 154 - 1813869 AGCCCAC-AGCCT-CACTCCACTTACACCTTTCCTAGTTAAGAACTTTTTCACTGAGAAGGTTTTAGCTTCAAA--ATCCT---ATTTATTCTCAAAATCTAGATGATTGAGTTTGACCATATGTTTTCCTAAAACAGACGaatgaatttaataaaatagc i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10939810 140 - 12073884 AGCCCATAAGCCA-TGCTCTGCCTGTAGCTTTTCCAGTTACCATGTCTTT---------------AGCTTCAGA--AT---AATATTTGTTCTCAAAGTCAGCATAATCAAGTTTGCTCATGTGTTTTTCTAAAGCATATTAGTGAATTTAAGGAAATACC i otoGar3.GL873575 I 3 C 0 s dasNov3.JH569188 544385 145 + 760995 aatccat-gggctgtagtttactacacctgTTCTTTACATATAACTTTTTTACTGATCAAGCTTTGGCTTCAAA--ATC-------TTGTTTTCAAACTCTAGAAAACTGAATTTGACCATTTATATTCCTAAAGTAATTTACTGAACT------AATAGC i dasNov3.JH569188 C 0 I 53 e canFam3.chr1 56161027 1683 + 122678785 I a score=569553.000000 s hg38.chr6_KB021644v2_alt 89563 62 + 185823 AATCAA----------------GTAAATTGGAAACAATGCACAGAAAATGAAAAGACTAAGGAAAAAG-ATACAATCTC s panTro5.chr6 173541484 62 + 175400573 AATCAA----------------GTAAATTGGAAACAATGCACAGAAAGTGAAAAGACTAAGGAAAAAG-ATACAATCTC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171780123 62 + 173848474 AATCAA----------------GTAAATTGGAAACAATGCACAGAAAGTGAAAAGACTAAGGAAAAAG-ATACAATCTC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11461962 62 - 12463322 AATCAA----------------GTAAATTGGAAACAATGCACAGAAAGTGAAAAGACTAAGGAAAAAG-ATACAATCTC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156288558 62 + 157873769 AGTCAA----------------GTATATTGGAAACGATGCACAGAAAGTCAAAAGACTGAGGAAAAAG-ATACAATCTC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170315400 62 + 172585720 aatcaa----------------gtaaattgcaaactatgcacagaaagtgaaaagactgaggaaaaag-atacaatctc i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169061234 62 - 170955103 aatcaa----------------gtaaattgcaaactatgcacagaaagtgaaaagactgaggaaaaag-atacaatctc i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8347920 62 + 10161646 AACCAA----------------GTAAATTGCAAACTATGCacagaaagtgaaaagactgaggaaaaag-acacaatctc i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1378625 62 + 3144229 aatcaa----------------gtaaattgcaaatgatgcacagaaagtggaaagactgaggaaaaag-atacaatctc i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96656961 62 + 98384682 aatcaa----------------gtaaattgcaaacgatgcacagaaggtggaaagactgaggaaaaag-atacagtctc i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8201900 62 - 10857215 aatcaa----------------gtaaattgcaaatgatgcacagaaagtggaaagactgaggaaaaag-atacaatctc i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15595963 62 - 23502949 aatcaa----------------gtaaattgcaaatgatacacagaaagtggaaagactgaggaaaaag-atacaatctc i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169865544 63 + 171630274 aattga----------------gtaaattgcaaatgacacacagagagtgaaaagactgaagaacacgaagacaatctc i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1278790 63 - 2905041 aattga----------------gtaaattgcaaatgacatacagagagtgaaaagactgaagaacaagaacaccatctc i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1235550 63 - 2164891 aattga----------------gtaaattgcaaatgacctacagagagtgaaaagactgaagaacaagaatacaatctc i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1489408 63 - 1813869 aattga----------------gtaaattgcaaatgacatacagagagtgaaaagactgaagaacaagaatacaatctc i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10939950 79 - 12073884 ATTAAAATACGGTATTTTAGATGCACATCTCGGATGATGTGCAGAGATGAAAAAGACTGGGGGAAAAGCACACGGTTTC i otoGar3.GL873575 C 0 I 27 e dasNov3.JH569188 544530 53 + 760995 I e canFam3.chr1 56161027 1683 + 122678785 I a score=1384446.000000 s hg38.chr6_KB021644v2_alt 89625 164 + 185823 ATgccaggtgcagtggctcacacctgtaatcccagtactttgggaggccgaggcaggagtaccacttgaggttaggagttcaagaccagcctggccaacatggtgaaaccccatttgtactaaaaaatacaaaaattagccaggcatggtggctgc--------------------------------------atacctgt s panTro5.chr6 173541546 164 + 175400573 ATgccaggtgcagtggctcacacctgttatcccagtactttgggaggccgaggcaggagtaccacttgaggttaggagttcaagaccagcctggccaacatggtgaaaccccatttgtactaaaaaatacaaaaattagccaggcatggtggctgc--------------------------------------atacctgt i panTro5.chr6 C 0 C 0 s panPan2.chr6 171780185 164 + 173848474 ATgccaggtgcagtggctcacacctgtaatcccagtactttgggaggccgaggcaggagtaccacttgaggttaggagttcaagaccagcctggccaacatggtgaaaccccatttgtactaaaaaatacaaaaattagccaggcatggtggctgc--------------------------------------atacctgt i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11462024 164 - 12463322 ATgccaggtgcagtggctcacacctgtaatcccagtactttgggaggccgaggcaggagtaccacttgaggttaggagttcaagaccagcctggccaacatggtgaaaccccatttgtactaaaaaatacaaaaattagccaggcatggtggccgc--------------------------------------atacctgt i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156288620 164 + 157873769 ATgccaggtgcagtggctcacacctgtaatcccagtactttgggaggccgaggcaggaggaccacttgaggttaggagttcaagaccagcctggccaacatggtgaaaccccatttgtactaaaaaatacaaaaatttgccaggcatggtggccgc--------------------------------------atgcctgt i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170315462 157 + 172585720 gcaccaggtgcggtggctcacacccgtaatcccagcactttgggaggct------ggaggaccacttgaggttaggagttcaagaccagcctggccaacatggtgaaaccccatttctcctaaaaaa-atgcaaattagccaggcatcgtggccac--------------------------------------atgcctgt i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169061296 158 - 170955103 gcaccaggtgcggtggctcacacccgtaatcccagcactttgggaggct------ggaggaccacttgaggttaggagttcaagaccagcctggccaacatggtgaaaccccatttctactaaaaaatatacaaattagccaggcatcgtggccac--------------------------------------atgcctgt i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8347982 157 + 10161646 gcaccaggtgcggtggctcacacccgtaatcccagcactttgggaggct-------gaggaccacttgaggttaggagttcaagaccagcctggccaacatggtgaaaccccatttctactaaaaaatatacaaattagccaggcatcatggccac--------------------------------------atgcctgt i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1378687 158 + 3144229 acaccaggtgtggtggctcacacctgtaatcccagcactttgggaggct------ggagcaccacttgaagttaggagttcaagaccagcctggccaacatggtgaaaccccatttctactaaaaaatatacaagttagccaggcatcgtggccgc--------------------------------------atgcctgt i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96657023 158 + 98384682 acaccaggtgcggcggctcacacctgtaatcccagcactttgggaggct------ggaggaccacttgaggttaggagttcaagaccagcctggccaacatggtgaaaccccatttctactaaaaaatatacaaattagccaggcttcgtggccgc--------------------------------------atgcctgt i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8201962 158 - 10857215 acaccaggtgtggtggctcacacctgtaatcccagcactttgggaggct------ggaggaccactggaggttaggagttcaagaccagcctggccagcatggtgaaaccccatttctactaaaaaatatacaagttagccaggcatcgtggccgc--------------------------------------atgcctgt i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15596025 158 - 23502949 acaccaggtgcggtggctcacacctgtaatcccagcactttgggaggct------ggaggaccacttgaggttaggagttcaagaccagcctggccaacatggtgaaaccccatttctactaaaaaatatacaaattagccacacattgtggctgc--------------------------------------atgcctgt i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169865607 162 + 171630274 aggccaggtgtggcggctcacgcctgtaatcccggtggtttgagacgccgaggtgggtggatcacctgaggtcaggagttcaagaccagcctggtcaacatggcaaaaccctgtttctact-gaaaatacaaaaattagccgggtgtggtggt-ac--------------------------------------ctgcctgt i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1278853 163 - 2905041 aggccaggtgtggtggctcacgcctgtaatcccagtggtttgagactccaaggcgggtggatcaccagaggtcaggggttcaagaccagcctggtccacatggcaaaacatggtttctactaaaaaatacaaaaattagccgggtgtggtggc-ga--------------------------------------gtgcctgt i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1235613 163 - 2164891 aggccaggtgtggcggctcatgcctgtaatcccagtggtttgagacaccaaggcgggtggatcgcctgaggttaggagttcaagaccagcccggtcaacatggcaaaaccctgtttctactaaaaaatacaaaaattagtcgggcatggtggc-gc--------------------------------------atgcctgt i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1489471 201 - 1813869 aggccaggtgtggcggctcatgcctgtaatcccagtggtttgagacgccaaggtgggtggatcacctgaggtcaggagttcaagaccagcctggtcaacgtggcaaaatcctgtttctactaaaaaatacaaaaattagccgggcgtggtggc-gcgctgtctcttatacacatctagatgtgtataagagacagtgcctgt i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10940029 27 - 12073884 I e dasNov3.JH569188 544530 53 + 760995 I e canFam3.chr1 56161027 1683 + 122678785 I a score=783952.000000 s hg38.chr6_KB021644v2_alt 89789 80 + 185823 agtcccagctactcaggtggctgaggcaggagaatagcttgaactcgggaggcggaggttgcagtgagccaagattgcac s panTro5.chr6 173541710 80 + 175400573 agtcccagctactcaggcggctgaggcaggagaatagcttgaactcgggaggcggaggttgcagtgagccaagactgcac i panTro5.chr6 C 0 C 0 s panPan2.chr6 171780349 80 + 173848474 agtcccagctactcaggcggctgaggcaggagaatagcttgaactcgggaggcggaggttgcagtgagccaagactgcac i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11462188 80 - 12463322 agtcccagctactcaggcggctgaggcaggagaatagcttgaactcgggaggcggaggttgcagtgagccaagactgcac i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156288784 80 + 157873769 agccccagctactcaggcggttgaggcaggagaatagcttgaactagggaggcggaggttgcagcgagccgagattgcgc i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170315619 80 + 172585720 agtcccagctactcaggaggctgaggcaggagaatagcttgaacccaggaggcagaggttgcagtgagccgagattgcac i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169061454 80 - 170955103 agtcccagctactcaggaggctgaggcaggagaatagcttgaacccaggaggcagaggttgcagtgagccgagattgcac i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8348139 80 + 10161646 agtcccagctactcaggaggctgaggcaggagaatagcttgaacccaggaggcagaggttgcagtgagccgagattgcac i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1378845 80 + 3144229 agtcccagctactcaggaggctgaggcaggagaatatcttgaacccaggaggcagaggttgcagtgagccgagattgcac i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96657181 80 + 98384682 agttccagctactcaggaggctgaggcaggagaatatcttgaacccaggaggcagaggttgcagtgagccaagattgcac i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8202120 80 - 10857215 agtcccagctactcaggaggctgaggcaggagaatatcttgaacccaggaggcagaggttgcaatgagctgagattgcac i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15596183 79 - 23502949 agtcccagctactcaggaggctgaggcaggag-atagcttgaacccaggaggcagaggttgcagtgagccgagattgcac i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169865769 80 + 171630274 aatcccagctactcgggaggctgaggcaggagaatcgcttgaacccaggaggcggaggttgcagtgagctgagatcacac i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1279016 80 - 2905041 aatcccagctactcaagaggctgaggcaggagaatcgcttgaacccaggaggcagaggttgtggtgagctgagatcatgc i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1235776 80 - 2164891 aatcccagctactcagggggctgaggcaggagaatcgcttgaacccggaaggcggaggttacggtgagctgagatcatgc i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1489672 80 - 1813869 aatcccagctactcgggaggctgaggcaggagaatcgcttgaacccaggaggcagaggttgcggtgagctgagatcatgc i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10940056 48 - 12073884 AGTCACAGCT------GGGGCTTCAGGAGGGGAA--------------------------GCAGCGATGAAGGTATGCAC i otoGar3.GL873575 I 27 C 0 e dasNov3.JH569188 544530 53 + 760995 I e canFam3.chr1 56161027 1683 + 122678785 I a score=173127.000000 s hg38.chr6_KB021644v2_alt 89869 17 + 185823 cattgcactccagcctg s panTro5.chr6 173541790 17 + 175400573 catggcactccagcctg i panTro5.chr6 C 0 C 0 s panPan2.chr6 171780429 17 + 173848474 cacggcactccagcctg i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11462268 17 - 12463322 catggcactccagcctg i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156288864 17 + 157873769 cactgcactccagcctg i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170315699 17 + 172585720 cattgcactccagcctg i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169061534 17 - 170955103 cattgcactccagcctg i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8348219 17 + 10161646 cattgcactccagcctg i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1378925 17 + 3144229 cattgcactccagcctg i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96657261 17 + 98384682 cattgcactccagcctg i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8202200 17 - 10857215 cattgcactccagcctg i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15596262 17 - 23502949 cattgcactccagcctg i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169865849 17 + 171630274 cacggcactccagcttg i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1279096 17 - 2905041 cactgcactccagcttg i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1235856 17 - 2164891 cactgcactccagcttg i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1489752 17 - 1813869 cactgcactccagcttg i aotNan1.NW_018494782v1 C 0 I 49 e otoGar3.GL873575 10940104 0 - 12073884 C e dasNov3.JH569188 544530 53 + 760995 I e canFam3.chr1 56161027 1683 + 122678785 I a score=33519.000000 s hg38.chr6_KB021644v2_alt 89886 6 + 185823 tgtgac s panTro5.chr6 173541807 6 + 175400573 tgtgac i panTro5.chr6 C 0 C 0 s panPan2.chr6 171780446 6 + 173848474 tgtgac i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11462285 6 - 12463322 tgtgac i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156288881 6 + 157873769 tgtgac i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170315716 6 + 172585720 tgcaac i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169061551 6 - 170955103 tgcaac i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8348236 6 + 10161646 tgcaac i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1378942 6 + 3144229 tgcaac i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96657278 6 + 98384682 tgcaac i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8202217 6 - 10857215 tgcaac i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15596279 6 - 23502949 tgcgac i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169865866 6 + 171630274 gggaac i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1279113 6 - 2905041 ggaaac i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1235873 6 - 2164891 gggaac i cebCap1.NW_016107695v1 C 0 I 44 e otoGar3.GL873575 10940104 0 - 12073884 C e aotNan1.NW_018494782v1 1489769 49 - 1813869 I e dasNov3.JH569188 544530 53 + 760995 I e canFam3.chr1 56161027 1683 + 122678785 I a score=80998.000000 s hg38.chr6_KB021644v2_alt 89892 21 + 185823 gagagtgaaactcT-------TTTTTTA- s panTro5.chr6 173541813 21 + 175400573 gagagtgaaactcT-------TTTTTTA- i panTro5.chr6 C 0 C 0 s panPan2.chr6 171780452 20 + 173848474 gagagtgaaactc--------TTTTTTA- i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11462291 21 - 12463322 gagagtgaaactcT-------TTTTTTA- i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156288887 28 + 157873769 aagagtgaaactcTTTTTTTATTTTTTA- i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170315722 20 + 172585720 aaaagtgaagctc--------tgtctca- i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169061557 20 - 170955103 aagagtgaagctc--------tgtctca- i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8348242 20 + 10161646 aagagtgaagctc--------tgtctca- i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1378948 20 + 3144229 aagagtgaagctc--------tgtctca- i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96657284 20 + 98384682 aagagtgaagctc--------tgtctca- i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8202223 20 - 10857215 aagagtgaagctc--------tgtctca- i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15596285 20 - 23502949 aaaagtgaaactc--------tgtctca- i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169865872 12 + 171630274 -agagggagactc---------------- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1279119 20 - 2905041 -agagcgagactc--------tccatcta i saiBol1.JH378287 C 0 I 19 e otoGar3.GL873575 10940104 0 - 12073884 C e aotNan1.NW_018494782v1 1489769 49 - 1813869 I e cebCap1.NW_016107695v1 1235879 44 - 2164891 I e dasNov3.JH569188 544530 53 + 760995 I e canFam3.chr1 56161027 1683 + 122678785 I a score=1827.000000 s hg38.chr6_KB021644v2_alt 89913 8 + 185823 TTTTTGAG s panTro5.chr6 173541834 8 + 175400573 TTTTTGAG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171780472 8 + 173848474 TTTTTGAG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11462312 8 - 12463322 TTTTTGAG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156288915 8 + 157873769 TTTTTGAG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170315742 8 + 172585720 aaaaaaaa i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169061577 8 - 170955103 aaaaaaaa i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8348262 8 + 10161646 aaaaaaaa i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1378968 8 + 3144229 aaaaaaaa i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96657304 8 + 98384682 aaaaaaaa i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8202243 8 - 10857215 aaaaaaaa i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15596305 8 - 23502949 aaaaaaaa i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169865884 8 + 171630274 tccaaaag i calJac3.chr4 C 0 C 0 e otoGar3.GL873575 10940104 0 - 12073884 C e saiBol1.JH378287 1279139 19 - 2905041 I e aotNan1.NW_018494782v1 1489769 49 - 1813869 I e cebCap1.NW_016107695v1 1235879 44 - 2164891 I e dasNov3.JH569188 544530 53 + 760995 I e canFam3.chr1 56161027 1683 + 122678785 I a score=-29964.000000 s hg38.chr6_KB021644v2_alt 89921 4 + 185823 --AC------GA s panTro5.chr6 173541842 4 + 175400573 --ac------ga i panTro5.chr6 C 0 C 0 s panPan2.chr6 171780480 4 + 173848474 --ac------ga i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11462320 4 - 12463322 --ac------ga i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156288923 4 + 157873769 --ac------aa i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170315750 10 + 172585720 --aaaaaaaaat i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169061585 4 - 170955103 --aa------at i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8348270 9 + 10161646 --aa-aaaaGAT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1378976 10 + 3144229 --aaaaaaaaaa i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96657312 7 + 98384682 --aa-aaaaa-- i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8202251 9 - 10857215 --aa-aaaaaat i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15596313 4 - 23502949 --aa------aa i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169865892 2 + 171630274 --ac-------- i calJac3.chr4 C 0 C 0 s dasNov3.JH569188 544583 4 + 760995 acat-------- i dasNov3.JH569188 I 53 C 0 e otoGar3.GL873575 10940104 0 - 12073884 C e saiBol1.JH378287 1279139 19 - 2905041 I e aotNan1.NW_018494782v1 1489769 49 - 1813869 I e cebCap1.NW_016107695v1 1235879 44 - 2164891 I e canFam3.chr1 56161027 1683 + 122678785 I a score=848883.000000 s hg38.chr6_KB021644v2_alt 89925 90 + 185823 agtctcagtaacctgtggaacaacacca--aggtgtcacataattatacctgggatcccagaaggagtaaaggaaatgagagaacaacattt s panTro5.chr6 173541846 90 + 175400573 agtctcagtaacctgtggaacaacacca--aggtgtcacataattatacctgggatcccagaaggagtaaaggaaatgagagaagaacattt i panTro5.chr6 C 0 C 0 s panPan2.chr6 171780484 90 + 173848474 agtctcagtaacctgtggaacaacacca--aggtgtcacataattatacctgggatcccagaaggagtaaaggaaatgagagaagaacattt i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11462324 90 - 12463322 agtctcagtaacctgtggaacaacacca--aggtgtcacataattatacctgggatcccagaaggagtaaaggaaatgagagaagaacattt i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156288927 90 + 157873769 agtctcagtaatctgtggaacaccacca--aggtgtcacataattatacctgggatcccagaaggagtaaaggaaatgagagaagaacattt i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170315760 90 + 172585720 agtctcagtaacctatggaacaacagca--aggtgtcacataattgtacctggaatcccagaaggagtaaaggaaatgagagaagaacattt i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169061589 90 - 170955103 agtctcagtaacctatggaacaacagca--aagtgtcacataattgtacctggaatcccagaaggagtaaaggaaatgagagaagaacattt i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8348279 90 + 10161646 AGTCtcagtaacctatggaacaacagca--aggtgtcacataattgtacctggaatcccagaaggagtaaaggaaatgagagaagaacattt i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1378986 90 + 3144229 agtctcagtaacctatggaacaacagca--aggtgtcacataattgtacctggaatcccagaaggaataaaggaaatgagagaagaacattt i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96657319 90 + 98384682 agtctcagtaacctatagaacaacagca--aggtgtcacataattgtacctggaatcccagaaggagtaaaggaaatgagagaagaacattt i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8202260 90 - 10857215 agtctcagtaacctatggaacaacagca--aggtgtcacgtaattgtacctggaatcccagaaggagtaaaggaaatgagagaagaacattt i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15596317 90 - 23502949 agtctcagtaacctatgaaacaacagca--aggtgtcacataattatacctggaatcccagaaggagtaaaggaaatgagagaagaacattt i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169865894 87 + 171630274 agtcttgggaacaagctgaaca---cct--atgtgtcacgtaatcatacttgggaccctgggaggagtaaaggaaataggaggaaaacattt i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1279158 88 - 2905041 agtttcaggaaccagctgaacaac-act--aggtgtcacgtgatgatacttgggcccccaggaggagtaaaggaaataagagg-aaacattt i saiBol1.JH378287 I 19 C 0 s cebCap1.NW_016107695v1 1235923 90 - 2164891 agtctcgggaacaagctgaacaacacct--aggtgtcacgtaattatacttgggaccccaggtggaataaaggaaataagaggaaaacattt i cebCap1.NW_016107695v1 I 44 C 0 s aotNan1.NW_018494782v1 1489818 90 - 1813869 agtctcggaaacaagctgaacaacacct--aggtgtcacaaaattatacttgggaccccaggaggagtaaaggaaataagaggaaaacattt i aotNan1.NW_018494782v1 I 49 C 0 s dasNov3.JH569188 544587 91 + 760995 agtgtcagcaaact-tggaataatttcaggagatataacagagttataaatggaatctcagaaggggaggtgggattgagagagaaatagtt i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10940104 0 - 12073884 C e canFam3.chr1 56161027 1683 + 122678785 I a score=2087756.000000 s hg38.chr6_KB021644v2_alt 90015 202 + 185823 gaacaaataggggccaaaa--catttctaaatttgatgaaaactctaagtgaatagatctaggaagct-caagtaatctcaagta-aaaaagc-------atacacatacacacagacacacaataaatacttacaaggcc----taccacaatcaaattgctgaaaacgggtggtaaagaaaacattttaaaagtagctggagagaaaagacccat s panTro5.chr6 173541936 202 + 175400573 gaacaaacagggaccaaaa--catttctaaatttgatgaaaactctacgtgaatagatctaggaagct-caaataatctcaagta-aaaaagc-------atacacatacacacagacacacaataaatacttacaaggcc----taccacaatcaaattgctgaaaacgggtggtaaagaaaacattttaaaagtagctggagagaaaagacccat i panTro5.chr6 C 0 C 0 s panPan2.chr6 171780574 202 + 173848474 gaacaaatagggaccaaaa--catttctaaatttgatgaaaactctaagtgaatagatctaggaagct-caagtaatctcaagta-aaaaagc-------atacacatacacacagacacacaataaatacttacaaggcc----taccacaatcaaattgctgaaaacgagtggtaaagaaaacattttaaaagtagctggagagaaaagacccat i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11462414 201 - 12463322 gaacaaataggggccaaaa--catttctaaatttgatgaaaactctaagtgaatagatctaggaagct-caaataatctcaagt--aaaaagc-------atacacagacacacagacacacaataaatacttacaaggcc----taccacaatcaaattgctgaaaacgggtggtaaagaaaacattttaaaagtagctggagagaaaagacccat i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156289017 202 + 157873769 gaacaaataggggccaaaa--catttctaaatttgatgaaaactctaagtgaatagatctaggaagct-caaataatctcaagta-acaaagc-------atacacatacacacagacacacaataaatacttacaaggcc----taccacaatcaaattgctgaaaaacagtggtaaagaaaacattttaaaagtagctggagagaaaagacccat i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170315850 201 + 172585720 gaacaaataggggctgaca--catttctaaatttgatgaaaactctaagtgtatatatctgggaagtt-caaataatctcaagta-aaaaagt-------ctacacatacacacagacacataataaatacttacaaggcc----taccacaatc-aattgctgaaaaccagtggtaaagaaaacattttaaaagtagctggagagaaaagacccat i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169061679 201 - 170955103 gaacaaataggggctgaca--catttctaaatttgatgaaaactctaagtgtatagatctgggaagtt-caaataatctcaagta-aaaaagt-------ctacacatacacacagacacataataaatacttacaaggcc----taccacaatc-aattgctgaaaaccagtggtaaagaaaacattttaaaagtagctggagagaaaagacccat i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8348369 201 + 10161646 gaacaaataggggctgaca--catttctaaatttgatgaaaactctaagtgtatagatctgggaagtt-caaataatctcaagta-aaaaagt-------ctacacatacacacagacacataataaatacttacaaggcc----taccacaatc-aattgctgaaaaccagtggtaaagaaaacattttaaaagtagctggagagaaaagacccat i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1379076 180 + 3144229 gaacaaataggggccgaga--aatttctaa----------------------atagatctgggaagtt-caaataatctcaagta-aaaaagt-------ctacacatacacacagacacataataaatacttacaaggcc----taccacaatcaaattgctgaaaaccagtggtaaagaaaacattttaaaagtagctggagagaaaagacctat i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96657409 202 + 98384682 gaacaaataggggccgaga--catttctaaatttgatgaaaactctaagtgtatagatctgggaagtt-caaataatctcaagtc-aaaaagt-------gtacacatacacacagacacataataaatacttacaaggcc----taccacaatcaaattgctgaaaaccagtggtaaagaacacattttaaaagtagctggagtgaaaagacccat i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8202350 179 - 10857215 gaacaaataggggccgaga--catttctaa----------------------atagatctgggaagtt-caaataatctcaagta-aaaaagt-------ctacacatacacacagacacataataaatacttacaaggcc----taccacaatc-aattgctgaaaaccagtggtaaagaaaacattttaaaagtagctggagagaaaagacctat i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15596407 202 - 23502949 gaacaaataggggccaaga--catttctaaatttgatgaaaactctaagtgtatagatctaggaagct-caaataatctcaagta-aaaaagt-------ctacacatacacacagacacataataaatacttacaaggcc----taccacaatcacattgctgaaaaccagtggtaaagaaaacattttaaaagtagctggagagaaaagacctat i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169865981 200 + 171630274 gagaagataggtgccaaga--cttttctgaatttgatgaaaa--ctaagtgaatagatctaggaagct-caaataatctcaagta-aagaagc-------atacacatacacacagacacacaatgaatacttaaaaggcc----tgccacaaccaaattgctgaaaaccagtggtaaagagaacattttaaaagcagctggagagaaaagacccat i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1279246 200 - 2905041 gaaaggataggtaccaaga--catttcggaatttgatgaaaa--ctaaatgaatagatctaggaagat-caaacaatctcaagta-aaaaagc-------atacacatacacacaggcacacaatgaatacttataaggcc----taccataaccaaattgctgaaaaccagtggtaaagagaacattttaaaagcagctggagagaaaagacccat i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1236013 200 - 2164891 gaaaagataggtgccaaga--catttctgaatttgatgaaaa--ctaagtgaatagatctaggaagtt-caaataatctcaagta-aaaaagc-------acacacatacacagagacacgcaatgaatacctgtaaggcc----taccacaaccaaattgctgagaaccggtggtaaagagaacattttaaaagcagcttgagagaaaagacccat i cebCap1.NW_016107695v1 C 0 I 911 s aotNan1.NW_018494782v1 1489908 200 - 1813869 gaaaagatagatgccaaga--catttctgaatttgatgaaaa--ctaagtgaatagatttaggaagct-caaataatctcaagtt-aaaaagc-------gtacacatacacacagacacacaatgaacacttagaaggcc----taccgcaaccaaattgctgaaaaccagtggtaaagagaacattttaaaagcagctggagagaaaagacccat i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10940104 210 - 12073884 gaaaaagtagtgtccaaaactcatttctaagtttgatgaaaactctaagttaacagatctaagaagttaaaaataatctcaataa-agaaagcgttacgtatacacacgaacacaaatgcacaagaaatccttgccacaaccagatgtcacaaccagatcacc-aaacccagcagtgtaaag-----cttagaagtggccagagggaaaagacccag i otoGar3.GL873575 C 0 C 0 s dasNov3.JH569188 544678 187 + 760995 aaagaaataatgaccaaaa--aattttaaaatttggttaaaactctaaatcaacaaatccaagaagct-ttacagatcctaagcagaagaaac-------acacacacacacacacacacacaat---------------c----aatcataaccaaattgctgaaaatctgtgataaagataa-atattaagagtagccagggcaaaaagacactt i dasNov3.JH569188 C 0 C 0 e canFam3.chr1 56161027 1683 + 122678785 I a score=513362.000000 s hg38.chr6_KB021644v2_alt 90217 66 + 185823 tccatgctgaggtgcaaaggtgagaatgacgactgtgggcttcatgacagatactatggaagtcag s panTro5.chr6 173542138 66 + 175400573 tccatgctgaggtgcaaaggtgagaatgacgactgtgggcttcatgacagatactatggaagtcag i panTro5.chr6 C 0 C 0 s panPan2.chr6 171780776 66 + 173848474 tccatgctgaggtgcaaaggtgagaatgacgactgtgggcttcatgacagatactatggaagtcag i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11462615 66 - 12463322 tccatgctgaggtgcaaaggtgagaatgacgactgtgggcttcatgacacatactatggaagtcag i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156289219 66 + 157873769 tccatgctgaggtgcaaagatgagaaagatgactgtgggcttcgtgatagatactacggaagtcag i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170316051 66 + 172585720 tccatgctgaggtgcaaaggtgaggatgacagctgtgggcttcatgacagatactacggaagtcgg i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169061880 66 - 170955103 tccatgctgaggtgcaaaggtgaggatgacagctgtgggcttcatgacagatactacggaagtcgg i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8348570 66 + 10161646 tccatgctgaggtgcaaaggtgaggatgacagctgtgggcttcatgacagatactacggaagtcgg i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1379256 66 + 3144229 tctatgctgaggtgcaaaggtgaggatgacagctgtgggcttcatgacagatactacggaagtcag i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96657611 66 + 98384682 tccatgctgatgtgcaaaggtgaggatgatggctgtgggctccatgacagatgctacggaagtcag i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8202529 66 - 10857215 tctatgctgaggtgcaaaggtgaggatgacagctgtgggcttcatgacagatactacggaagtcag i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15596609 66 - 23502949 tctatgctgaggtgcaaaggtgaggatgatggctgtgggcttcatgacagatactacagaagtcag i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169866181 64 + 171630274 cagacactgaggtgc-gtggtgaggacggcggctgccggcttcacgacagaca-cagggaagccag i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1279446 63 - 2905041 cagacac--aggtgc-atggcgaggatggtggctgccggcttcccgacagacaccacagaagcccg i saiBol1.JH378287 C 0 C 0 s aotNan1.NW_018494782v1 1490108 65 - 1813869 cagacactgaggtgc-atggtgaggacagcggctgccggcttcacgacagacactacggaagccag i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10940314 60 - 12073884 tacatcctgaggcacaaatacgcg-----tgacagtggactttgtgacagatattgtgtga-ccaa i otoGar3.GL873575 C 0 C 0 s dasNov3.JH569188 544865 60 + 760995 tacattttgagaaacaaagataaaaataacagcagaAT------TGACAGATATTATTGATCTTAG i dasNov3.JH569188 C 0 I 1453 e cebCap1.NW_016107695v1 1236213 911 - 2164891 I e canFam3.chr1 56161027 1683 + 122678785 I a score=102562.000000 s hg38.chr6_KB021644v2_alt 90283 11 + 185823 aagacagggaa s panTro5.chr6 173542204 11 + 175400573 aagacagggaa i panTro5.chr6 C 0 C 0 s panPan2.chr6 171780842 11 + 173848474 aagacagggaa i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11462681 11 - 12463322 aagacagggaa i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156289285 11 + 157873769 aagacagggaa i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170316117 11 + 172585720 aagacagggaa i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169061946 11 - 170955103 aagacggggaa i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8348636 11 + 10161646 aagacagggaa i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1379322 10 + 3144229 aagacaggg-a i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96657677 11 + 98384682 aagacagggaa i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8202595 11 - 10857215 aagacagggaa i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15596675 11 - 23502949 aagacagggaa i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169866245 11 + 171630274 gagacagggaa i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1279509 11 - 2905041 gagacggggaa i saiBol1.JH378287 C 0 C 0 s aotNan1.NW_018494782v1 1490173 11 - 1813869 gagacagggaa i aotNan1.NW_018494782v1 C 0 I 531 s otoGar3.GL873575 10940374 11 - 12073884 aagacaatgag i otoGar3.GL873575 C 0 C 0 e cebCap1.NW_016107695v1 1236213 911 - 2164891 I e dasNov3.JH569188 544925 1453 + 760995 I e canFam3.chr1 56161027 1683 + 122678785 I a score=62083.000000 s hg38.chr6_KB021644v2_alt 90294 10 + 185823 ATGGCA-----------GGCA s panTro5.chr6 173542215 10 + 175400573 atggca-----------ggca i panTro5.chr6 C 0 C 0 s panPan2.chr6 171780853 10 + 173848474 atggca-----------ggca i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11462692 10 - 12463322 atggca-----------ggca i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156289296 10 + 157873769 atggca-----------ggca i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170316128 10 + 172585720 acggca-----------ggca i rheMac8.chr4 C 0 I 102 s macFas5.chr4 169061957 10 - 170955103 acggca-----------ggca i macFas5.chr4 C 0 I 1 s macNem1.NW_012011000v1 8348647 10 + 10161646 acggca-----------ggca i macNem1.NW_012011000v1 C 0 I 116 s cerAty1.NW_012002071v1 1379332 10 + 3144229 acggca-----------gaca i cerAty1.NW_012002071v1 C 0 I 1 s chlSab2.chr13 96657688 10 + 98384682 acggca-----------ggca i chlSab2.chr13 C 0 I 102 s manLeu1.NW_012106474v1 8202606 10 - 10857215 acggca-----------ggca i manLeu1.NW_012106474v1 C 0 I 1 s colAng1.NW_012114488v1 15596686 10 - 23502949 acggca-----------ggca i colAng1.NW_012114488v1 C 0 I 104 s calJac3.chr4 169866256 10 + 171630274 ctgaca-----------tgca i calJac3.chr4 C 0 I 1 s saiBol1.JH378287 1279520 10 - 2905041 ctgacc-----------cgca i saiBol1.JH378287 C 0 I 1 s otoGar3.GL873575 10940385 21 - 12073884 atggcacagctaaggatggaa i otoGar3.GL873575 C 0 I 13 e aotNan1.NW_018494782v1 1490184 531 - 1813869 I e cebCap1.NW_016107695v1 1236213 911 - 2164891 I e dasNov3.JH569188 544925 1453 + 760995 I e canFam3.chr1 56161027 1683 + 122678785 I a score=1500.000000 s hg38.chr6_KB021644v2_alt 90304 1 + 185823 G s panTro5.chr6 173542225 1 + 175400573 g i panTro5.chr6 C 0 I 96 s panPan2.chr6 171780863 1 + 173848474 g i panPan2.chr6 C 0 I 110 s gorGor5.CYUI01015032v1 11462702 1 - 12463322 g i gorGor5.CYUI01015032v1 C 0 I 96 s nomLeu3.chr3 156289306 1 + 157873769 g i nomLeu3.chr3 C 0 I 96 s otoGar3.GL873575 10940419 1 - 12073884 g i otoGar3.GL873575 I 13 C 0 e saiBol1.JH378287 1279530 1 - 2905041 I e aotNan1.NW_018494782v1 1490184 531 - 1813869 I e cebCap1.NW_016107695v1 1236213 911 - 2164891 I e calJac3.chr4 169866266 1 + 171630274 I e dasNov3.JH569188 544925 1453 + 760995 I e colAng1.NW_012114488v1 15596696 104 - 23502949 I e canFam3.chr1 56161027 1683 + 122678785 I e chlSab2.chr13 96657698 102 + 98384682 I e cerAty1.NW_012002071v1 1379342 1 + 3144229 I e manLeu1.NW_012106474v1 8202616 1 - 10857215 I e macNem1.NW_012011000v1 8348657 116 + 10161646 I e rheMac8.chr4 170316138 102 + 172585720 I e macFas5.chr4 169061967 1 - 170955103 I a score=10318.000000 s hg38.chr6_KB021644v2_alt 90305 2 + 185823 GC s panTro5.chr6 173542322 2 + 175400573 gc i panTro5.chr6 I 96 C 0 s gorGor5.CYUI01015032v1 11462799 2 - 12463322 gc i gorGor5.CYUI01015032v1 I 96 C 0 s nomLeu3.chr3 156289403 2 + 157873769 gc i nomLeu3.chr3 I 96 C 0 s rheMac8.chr4 170316240 2 + 172585720 gc i rheMac8.chr4 I 102 C 0 s macFas5.chr4 169061968 2 - 170955103 gc i macFas5.chr4 I 1 C 0 s cerAty1.NW_012002071v1 1379343 2 + 3144229 gc i cerAty1.NW_012002071v1 I 1 I 101 s chlSab2.chr13 96657800 2 + 98384682 gc i chlSab2.chr13 I 102 C 0 s manLeu1.NW_012106474v1 8202617 2 - 10857215 gc i manLeu1.NW_012106474v1 I 1 I 101 s calJac3.chr4 169866267 2 + 171630274 gc i calJac3.chr4 I 1 C 0 s saiBol1.JH378287 1279531 2 - 2905041 ac i saiBol1.JH378287 I 1 C 0 s otoGar3.GL873575 10940420 2 - 12073884 gt i otoGar3.GL873575 C 0 C 0 e aotNan1.NW_018494782v1 1490184 531 - 1813869 I e cebCap1.NW_016107695v1 1236213 911 - 2164891 I e dasNov3.JH569188 544925 1453 + 760995 I e colAng1.NW_012114488v1 15596696 104 - 23502949 I e canFam3.chr1 56161027 1683 + 122678785 I e macNem1.NW_012011000v1 8348657 116 + 10161646 I e panPan2.chr6 171780864 110 + 173848474 I a score=6228.000000 s hg38.chr6_KB021644v2_alt 90307 1 + 185823 C s panTro5.chr6 173542324 1 + 175400573 c i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11462801 1 - 12463322 c i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156289405 1 + 157873769 c i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170316242 1 + 172585720 c i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169061970 1 - 170955103 c i macFas5.chr4 C 0 I 101 s cerAty1.NW_012002071v1 1379446 1 + 3144229 C i cerAty1.NW_012002071v1 I 101 C 0 s chlSab2.chr13 96657802 1 + 98384682 c i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8202720 1 - 10857215 C i manLeu1.NW_012106474v1 I 101 C 0 s colAng1.NW_012114488v1 15596800 1 - 23502949 C i colAng1.NW_012114488v1 I 104 C 0 s calJac3.chr4 169866269 1 + 171630274 t i calJac3.chr4 C 0 I 104 s saiBol1.JH378287 1279533 1 - 2905041 c i saiBol1.JH378287 C 0 I 105 s otoGar3.GL873575 10940422 1 - 12073884 c i otoGar3.GL873575 C 0 C 0 e aotNan1.NW_018494782v1 1490184 531 - 1813869 I e cebCap1.NW_016107695v1 1236213 911 - 2164891 I e dasNov3.JH569188 544925 1453 + 760995 I e canFam3.chr1 56161027 1683 + 122678785 I e macNem1.NW_012011000v1 8348657 116 + 10161646 I e panPan2.chr6 171780864 110 + 173848474 I a score=52174.000000 s hg38.chr6_KB021644v2_alt 90308 11 + 185823 ----ACAACACACCC s panTro5.chr6 173542325 11 + 175400573 ----acaacacaccc i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11462802 11 - 12463322 ----acaacacacct i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156289406 11 + 157873769 ----acaacacaccc i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170316243 11 + 172585720 ----acaacacaccc i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169062072 11 - 170955103 ----acaacacaccc i macFas5.chr4 I 101 C 0 s cerAty1.NW_012002071v1 1379447 11 + 3144229 ----ACAACATACCC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96657803 11 + 98384682 ----acaacacaccc i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8202721 11 - 10857215 ----ACAACATACCC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15596801 11 - 23502949 ----ACAACATACCC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169866374 11 + 171630274 ----acagcacacac i calJac3.chr4 I 104 C 0 s otoGar3.GL873575 10940423 15 - 12073884 aaaaaacccataccc i otoGar3.GL873575 C 0 C 0 e saiBol1.JH378287 1279534 105 - 2905041 I e aotNan1.NW_018494782v1 1490184 531 - 1813869 I e cebCap1.NW_016107695v1 1236213 911 - 2164891 I e dasNov3.JH569188 544925 1453 + 760995 I e canFam3.chr1 56161027 1683 + 122678785 I e macNem1.NW_012011000v1 8348657 116 + 10161646 I e panPan2.chr6 171780864 110 + 173848474 I a score=191278.000000 s hg38.chr6_KB021644v2_alt 90319 55 + 185823 -AACAGAATGGCTGTCGTCCCAAAGTCTGAGGTTACCAGGCGTTGAGGAAGAGACT s panTro5.chr6 173542336 55 + 175400573 -aacagaatggccgtcatcccaaagtctgagtttgccaggtgttgaagaagaGACC i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11462813 54 - 12463322 -aacagaatggctgtcat-ccaaagtctgagtttaccaggcattgaggaagaGACC i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170316254 55 + 172585720 -aacagaatggctgtcgtctcgaagtctgaggttaccaggtgttgaagaagaGACC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169062083 55 - 170955103 -aacagaatggctgtcatctcgaagtctgaggttaccaggtgttgaagaagaGACC i macFas5.chr4 C 0 C 0 s cerAty1.NW_012002071v1 1379458 55 + 3144229 -AACAGAATGGCTGTCGTCTCAAAGTCTGAGGTTACCAGGCACTGAAGAAGAGACT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96657814 55 + 98384682 -aacagaatggctgtcgtctcaaagtctgaggttaccaggtgttgaagaagaGACG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8202732 55 - 10857215 -AACAGAATGGCTGTCGTCTCAAAGTCTGAGGTTACCAGACACTGAACAAGAGACC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15596812 55 - 23502949 -AACAGAATGGCTGTCATCTCAAAGTCTGAGGTTACCAGGCATTGAAGAAGAGACC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169866385 55 + 171630274 -agcagaatggctgtcatctcaaagtctggggttaccagccgtcgaagaagagact i calJac3.chr4 C 0 C 0 s otoGar3.GL873575 10940438 43 - 12073884 aaaaaaagt-------atttgaaaattaaaactaacca------cagtgagacacc i otoGar3.GL873575 C 0 C 0 e saiBol1.JH378287 1279534 105 - 2905041 I e aotNan1.NW_018494782v1 1490184 531 - 1813869 I e cebCap1.NW_016107695v1 1236213 911 - 2164891 I e dasNov3.JH569188 544925 1453 + 760995 I e canFam3.chr1 56161027 1683 + 122678785 I e nomLeu3.chr3 156289417 0 + 157873769 C e macNem1.NW_012011000v1 8348657 116 + 10161646 I e panPan2.chr6 171780864 110 + 173848474 I a score=26226.000000 s hg38.chr6_KB021644v2_alt 90374 8 + 185823 GATGCC------TT s panTro5.chr6 173542391 8 + 175400573 GATGCC------TT i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11462867 8 - 12463322 GATGCC------TT i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170316309 8 + 172585720 GATGCC------TT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169062138 8 - 170955103 AGTGCC------TT i macFas5.chr4 C 0 T 65 s cerAty1.NW_012002071v1 1379513 8 + 3144229 GATGCC------TT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96657869 8 + 98384682 GGTGCC------TT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8202787 8 - 10857215 GATGCC------TT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15596867 8 - 23502949 AGTGCC------TT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169866440 8 + 171630274 gatgcc------tt i calJac3.chr4 C 0 I 1 s saiBol1.JH378287 1279639 14 - 2905041 gatgccacaacaca i saiBol1.JH378287 I 105 I 1 s otoGar3.GL873575 10940481 8 - 12073884 actgca------ca i otoGar3.GL873575 C 0 C 0 e aotNan1.NW_018494782v1 1490184 531 - 1813869 I e cebCap1.NW_016107695v1 1236213 911 - 2164891 I e dasNov3.JH569188 544925 1453 + 760995 I e canFam3.chr1 56161027 1683 + 122678785 I e nomLeu3.chr3 156289417 0 + 157873769 C e macNem1.NW_012011000v1 8348657 116 + 10161646 I e panPan2.chr6 171780864 110 + 173848474 I a score=-4638.000000 s hg38.chr6_KB021644v2_alt 90382 3 + 185823 -CC-T s panTro5.chr6 173542399 3 + 175400573 -CC-T i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11462875 3 - 12463322 -CC-T i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170316317 2 + 172585720 -CC-- i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169062081 2 - 170955103 -cc-- i macFas5.chr4 T 65 C 0 s cerAty1.NW_012002071v1 1379521 2 + 3144229 -CC-- i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96657877 2 + 98384682 -CC-- i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8202795 2 - 10857215 -CC-- i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15596875 3 - 23502949 -CCT- i colAng1.NW_012114488v1 C 0 T 66 s calJac3.chr4 169866449 2 + 171630274 -ct-- i calJac3.chr4 I 1 C 0 s saiBol1.JH378287 1279654 2 - 2905041 -cc-- i saiBol1.JH378287 I 1 C 0 s otoGar3.GL873575 10940489 3 - 12073884 acc-- i otoGar3.GL873575 C 0 C 0 e aotNan1.NW_018494782v1 1490184 531 - 1813869 I e cebCap1.NW_016107695v1 1236213 911 - 2164891 I e dasNov3.JH569188 544925 1453 + 760995 I e canFam3.chr1 56161027 1683 + 122678785 I e nomLeu3.chr3 156289417 0 + 157873769 C e macNem1.NW_012011000v1 8348657 116 + 10161646 I e panPan2.chr6 171780864 110 + 173848474 I a score=-842.000000 s hg38.chr6_KB021644v2_alt 90385 1 + 185823 A s panTro5.chr6 173542402 1 + 175400573 A i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11462878 1 - 12463322 A i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170316319 1 + 172585720 T i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169062083 1 - 170955103 a i macFas5.chr4 C 0 C 0 s cerAty1.NW_012002071v1 1379523 1 + 3144229 T i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96657879 1 + 98384682 T i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8202797 1 - 10857215 T i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15596812 1 - 23502949 A i colAng1.NW_012114488v1 T 66 C 0 s calJac3.chr4 169866451 1 + 171630274 a i calJac3.chr4 C 0 I 629 s saiBol1.JH378287 1279656 1 - 2905041 a i saiBol1.JH378287 C 0 C 0 s otoGar3.GL873575 10940492 1 - 12073884 a i otoGar3.GL873575 C 0 C 0 e aotNan1.NW_018494782v1 1490184 531 - 1813869 I e cebCap1.NW_016107695v1 1236213 911 - 2164891 I e dasNov3.JH569188 544925 1453 + 760995 I e canFam3.chr1 56161027 1683 + 122678785 I e nomLeu3.chr3 156289417 0 + 157873769 C e macNem1.NW_012011000v1 8348657 116 + 10161646 I e panPan2.chr6 171780864 110 + 173848474 I a score=162381.000000 s hg38.chr6_KB021644v2_alt 90386 40 + 185823 ACAGAATGGCTGTCGTCTCAAAGTCTGAGGTTACCAGGCG s panTro5.chr6 173542403 40 + 175400573 ACAGAATGGCTGTCGTCTCAAAGTCTGAGGTTACCAGGCG i panTro5.chr6 C 0 T 107 s gorGor5.CYUI01015032v1 11462879 40 - 12463322 ACAGAATGGCTGTCGTCTCAAAGTCTGAGGTTACCAGACG i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170316320 40 + 172585720 ACAGAATGGCTGTCGTCTCAAAGACTGAGGTTACCAGGTG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169062084 40 - 170955103 acagaatggctgtcatctcgaagtctgaggttaccaggtg i macFas5.chr4 C 0 C 0 s cerAty1.NW_012002071v1 1379524 40 + 3144229 ACAGAATGGCTGTCGTCTCAAAGACTGAGGTTACCAGGTG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96657880 40 + 98384682 ACAGAATGGCTGTCGTCTCGAAGTCTGAGGTAGCCAGGCG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8202798 40 - 10857215 ACAGAATGGCTGTCGTCTCAAAGACTGAGGTTACCAGGCG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15596813 40 - 23502949 ACAGAATGGCTGTCATCTCAAAGTCTGAGGTTACCAGGCA i colAng1.NW_012114488v1 C 0 C 0 s saiBol1.JH378287 1279657 40 - 2905041 gcagaatggctgtcatctcaaagtctggggttaccagcca i saiBol1.JH378287 C 0 C 0 s otoGar3.GL873575 10940493 40 - 12073884 tgagaaaggctataatCCCACAGTCCACCGTTACCGGGTA i otoGar3.GL873575 C 0 C 0 e aotNan1.NW_018494782v1 1490184 531 - 1813869 I e cebCap1.NW_016107695v1 1236213 911 - 2164891 I e calJac3.chr4 169866452 629 + 171630274 I e dasNov3.JH569188 544925 1453 + 760995 I e canFam3.chr1 56161027 1683 + 122678785 I e nomLeu3.chr3 156289417 0 + 157873769 C e macNem1.NW_012011000v1 8348657 116 + 10161646 I e panPan2.chr6 171780864 110 + 173848474 I a score=10494.000000 s hg38.chr6_KB021644v2_alt 90426 3 + 185823 TTG s gorGor5.CYUI01015032v1 11462919 3 - 12463322 TTG i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170316360 3 + 172585720 TTG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169062124 3 - 170955103 ttg i macFas5.chr4 C 0 C 0 s cerAty1.NW_012002071v1 1379564 3 + 3144229 TTG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96657920 3 + 98384682 TTG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8202838 3 - 10857215 CTG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15596853 3 - 23502949 TTG i colAng1.NW_012114488v1 C 0 C 0 s saiBol1.JH378287 1279697 3 - 2905041 tcg i saiBol1.JH378287 C 0 C 0 s otoGar3.GL873575 10940533 3 - 12073884 TTG i otoGar3.GL873575 C 0 I 699 e aotNan1.NW_018494782v1 1490184 531 - 1813869 I e cebCap1.NW_016107695v1 1236213 911 - 2164891 I e calJac3.chr4 169866452 629 + 171630274 I e dasNov3.JH569188 544925 1453 + 760995 I e canFam3.chr1 56161027 1683 + 122678785 I e nomLeu3.chr3 156289417 0 + 157873769 C e macNem1.NW_012011000v1 8348657 116 + 10161646 I e panPan2.chr6 171780864 110 + 173848474 I e panTro5.chr6 173542443 107 + 175400573 T a score=5576.000000 s hg38.chr6_KB021644v2_alt 90429 2 + 185823 AA s gorGor5.CYUI01015032v1 11462922 2 - 12463322 AG i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170316363 2 + 172585720 AA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169062127 2 - 170955103 aa i macFas5.chr4 C 0 C 0 s cerAty1.NW_012002071v1 1379567 2 + 3144229 AA i cerAty1.NW_012002071v1 C 0 I 20 s chlSab2.chr13 96657923 2 + 98384682 AA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8202841 2 - 10857215 AA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15596856 2 - 23502949 AA i colAng1.NW_012114488v1 C 0 C 0 s saiBol1.JH378287 1279700 2 - 2905041 aa i saiBol1.JH378287 C 0 C 0 e otoGar3.GL873575 10940536 699 - 12073884 I e aotNan1.NW_018494782v1 1490184 531 - 1813869 I e cebCap1.NW_016107695v1 1236213 911 - 2164891 I e calJac3.chr4 169866452 629 + 171630274 I e dasNov3.JH569188 544925 1453 + 760995 I e canFam3.chr1 56161027 1683 + 122678785 I e nomLeu3.chr3 156289417 0 + 157873769 C e macNem1.NW_012011000v1 8348657 116 + 10161646 I e panPan2.chr6 171780864 110 + 173848474 I e panTro5.chr6 173542443 107 + 175400573 T a score=47097.000000 s hg38.chr6_KB021644v2_alt 90431 20 + 185823 GAAGAGACCGATGCCTTCCT s gorGor5.CYUI01015032v1 11462924 20 - 12463322 GAAGAGACCGATGCCTTCCT i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170316365 20 + 172585720 GAAGAGACCGGTGCCTTCCT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169062129 20 - 170955103 gaagaGACCAGTGCCTTCCT i macFas5.chr4 C 0 C 0 s chlSab2.chr13 96657925 20 + 98384682 GAAGAGACTGGTGCCTTCCT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8202843 20 - 10857215 GAAGAGACCGATGCCTTCCT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15596858 20 - 23502949 GAAGAGACCAGTGCCTTCCT i colAng1.NW_012114488v1 C 0 C 0 s saiBol1.JH378287 1279702 20 - 2905041 gaagacactgatgccttcct i saiBol1.JH378287 C 0 C 0 e otoGar3.GL873575 10940536 699 - 12073884 I e aotNan1.NW_018494782v1 1490184 531 - 1813869 I e cebCap1.NW_016107695v1 1236213 911 - 2164891 I e calJac3.chr4 169866452 629 + 171630274 I e dasNov3.JH569188 544925 1453 + 760995 I e canFam3.chr1 56161027 1683 + 122678785 I e cerAty1.NW_012002071v1 1379569 20 + 3144229 I e nomLeu3.chr3 156289417 0 + 157873769 C e macNem1.NW_012011000v1 8348657 116 + 10161646 I e panPan2.chr6 171780864 110 + 173848474 I e panTro5.chr6 173542443 107 + 175400573 T a score=3276.000000 s hg38.chr6_KB021644v2_alt 90451 1 + 185823 A s panTro5.chr6 173542336 1 + 175400573 a i panTro5.chr6 T 107 C 0 s gorGor5.CYUI01015032v1 11462944 1 - 12463322 A i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170316385 1 + 172585720 A i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169062149 1 - 170955103 A i macFas5.chr4 C 0 C 0 s chlSab2.chr13 96657945 1 + 98384682 A i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8202863 1 - 10857215 A i manLeu1.NW_012106474v1 C 0 I 163 s colAng1.NW_012114488v1 15596878 1 - 23502949 A i colAng1.NW_012114488v1 C 0 I 65 s saiBol1.JH378287 1279722 1 - 2905041 a i saiBol1.JH378287 C 0 I 644 e otoGar3.GL873575 10940536 699 - 12073884 I e aotNan1.NW_018494782v1 1490184 531 - 1813869 I e cebCap1.NW_016107695v1 1236213 911 - 2164891 I e calJac3.chr4 169866452 629 + 171630274 I e dasNov3.JH569188 544925 1453 + 760995 I e canFam3.chr1 56161027 1683 + 122678785 I e cerAty1.NW_012002071v1 1379569 20 + 3144229 I e nomLeu3.chr3 156289417 0 + 157873769 C e macNem1.NW_012011000v1 8348657 116 + 10161646 I e panPan2.chr6 171780864 110 + 173848474 I a score=1365.000000 s hg38.chr6_KB021644v2_alt 90452 1 + 185823 A s panTro5.chr6 173542337 1 + 175400573 a i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11462945 1 - 12463322 A i gorGor5.CYUI01015032v1 C 0 C 0 s cerAty1.NW_012002071v1 1379589 1 + 3144229 A i cerAty1.NW_012002071v1 I 20 C 0 s chlSab2.chr13 96657946 1 + 98384682 A i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15596944 1 - 23502949 A i colAng1.NW_012114488v1 I 65 C 0 e otoGar3.GL873575 10940536 699 - 12073884 I e saiBol1.JH378287 1279723 644 - 2905041 I e aotNan1.NW_018494782v1 1490184 531 - 1813869 I e cebCap1.NW_016107695v1 1236213 911 - 2164891 I e calJac3.chr4 169866452 629 + 171630274 I e dasNov3.JH569188 544925 1453 + 760995 I e canFam3.chr1 56161027 1683 + 122678785 I e nomLeu3.chr3 156289417 0 + 157873769 C e manLeu1.NW_012106474v1 8202864 163 - 10857215 I e macNem1.NW_012011000v1 8348657 116 + 10161646 I e rheMac8.chr4 170316386 0 + 172585720 C e macFas5.chr4 169062150 0 - 170955103 C e panPan2.chr6 171780864 110 + 173848474 I a score=51449.000000 s hg38.chr6_KB021644v2_alt 90453 26 + 185823 C-AGAATGGCTGTCGTCCCAAAGTCTG s panTro5.chr6 173542338 26 + 175400573 c-agaatggccgtcatcccaaagtctg i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11462946 26 - 12463322 C-AGAATGGCTGTCGTCTCAAAGTCTG i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170316386 27 + 172585720 AGAGAATGGCTGTCGTCTCGAAGTCTG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169062150 26 - 170955103 C-AGAATGGCTGTCGTCTCAAAGACTG i macFas5.chr4 C 0 C 0 s cerAty1.NW_012002071v1 1379590 26 + 3144229 C-AGAATGGCTGTCATCTCGAAGTCTG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96657947 26 + 98384682 -GAGAATGGCTGTTGTCTCAACGTCTG i chlSab2.chr13 C 0 I 6 s colAng1.NW_012114488v1 15596945 26 - 23502949 -GAGAATGGCTGTCGTCTCAAAGTCTG i colAng1.NW_012114488v1 C 0 I 6 e otoGar3.GL873575 10940536 699 - 12073884 I e saiBol1.JH378287 1279723 644 - 2905041 I e aotNan1.NW_018494782v1 1490184 531 - 1813869 I e cebCap1.NW_016107695v1 1236213 911 - 2164891 I e calJac3.chr4 169866452 629 + 171630274 I e dasNov3.JH569188 544925 1453 + 760995 I e canFam3.chr1 56161027 1683 + 122678785 I e nomLeu3.chr3 156289417 0 + 157873769 C e manLeu1.NW_012106474v1 8202864 163 - 10857215 I e macNem1.NW_012011000v1 8348657 116 + 10161646 I e panPan2.chr6 171780864 110 + 173848474 I a score=15181.000000 s hg38.chr6_KB021644v2_alt 90479 6 + 185823 AGGTTA s panTro5.chr6 173542364 6 + 175400573 agtttg i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11462972 6 - 12463322 AGGTTA i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170316413 6 + 172585720 AGGTTA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169062176 6 - 170955103 AGGTTA i macFas5.chr4 C 0 C 0 s cerAty1.NW_012002071v1 1379616 6 + 3144229 AGGTAG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96657979 6 + 98384682 AGGTTA i chlSab2.chr13 I 6 T 6 s manLeu1.NW_012106474v1 8203027 6 - 10857215 AGGTTA i manLeu1.NW_012106474v1 I 163 C 0 s colAng1.NW_012114488v1 15596977 6 - 23502949 AGGTTA i colAng1.NW_012114488v1 I 6 C 0 e otoGar3.GL873575 10940536 699 - 12073884 I e saiBol1.JH378287 1279723 644 - 2905041 I e aotNan1.NW_018494782v1 1490184 531 - 1813869 I e cebCap1.NW_016107695v1 1236213 911 - 2164891 I e calJac3.chr4 169866452 629 + 171630274 I e dasNov3.JH569188 544925 1453 + 760995 I e canFam3.chr1 56161027 1683 + 122678785 I e nomLeu3.chr3 156289417 0 + 157873769 C e macNem1.NW_012011000v1 8348657 116 + 10161646 I e panPan2.chr6 171780864 110 + 173848474 I a score=71958.000000 s hg38.chr6_KB021644v2_alt 90485 32 + 185823 CCAGGCGTTGAGGAAGAGACCGATGCCTTCCT s panTro5.chr6 173542370 32 + 175400573 ccaggtgttgaagaagaGACCGATGCCTTCCT i panTro5.chr6 C 0 T 66 s gorGor5.CYUI01015032v1 11462978 32 - 12463322 CCAGACGTTGAGGAAGAGACCGATGCCTTCCT i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170316419 32 + 172585720 CCAGGTGTTGAAGAAGAGACCGGTGCCTTCCT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169062182 32 - 170955103 CCAGGTGTTGAAGAAGAGACCGGTGCCTTCCT i macFas5.chr4 C 0 C 0 s cerAty1.NW_012002071v1 1379622 32 + 3144229 CCAGGCGTTGAAGAAGAGACTGGTGCCTTCCT i cerAty1.NW_012002071v1 C 0 C 0 s manLeu1.NW_012106474v1 8203033 32 - 10857215 CCAGACATTGAAGAAGAGATGGGTGCTTTCCT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15596983 32 - 23502949 CCAGGCATTGAAGAagagaccagtgctttcct i colAng1.NW_012114488v1 C 0 C 0 e otoGar3.GL873575 10940536 699 - 12073884 I e saiBol1.JH378287 1279723 644 - 2905041 I e aotNan1.NW_018494782v1 1490184 531 - 1813869 I e cebCap1.NW_016107695v1 1236213 911 - 2164891 I e calJac3.chr4 169866452 629 + 171630274 I e dasNov3.JH569188 544925 1453 + 760995 I e canFam3.chr1 56161027 1683 + 122678785 I e chlSab2.chr13 96657985 6 + 98384682 T e nomLeu3.chr3 156289417 0 + 157873769 C e macNem1.NW_012011000v1 8348657 116 + 10161646 I e panPan2.chr6 171780864 110 + 173848474 I a score=2548.000000 s hg38.chr6_KB021644v2_alt 90517 1 + 185823 A s panTro5.chr6 173542336 1 + 175400573 a i panTro5.chr6 T 66 C 0 s gorGor5.CYUI01015032v1 11463010 1 - 12463322 A i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170316451 1 + 172585720 A i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169062214 1 - 170955103 A i macFas5.chr4 C 0 C 0 s cerAty1.NW_012002071v1 1379654 1 + 3144229 A i cerAty1.NW_012002071v1 C 0 C 0 s manLeu1.NW_012106474v1 8203065 1 - 10857215 A i manLeu1.NW_012106474v1 C 0 T 138 s colAng1.NW_012114488v1 15597015 1 - 23502949 a i colAng1.NW_012114488v1 C 0 C 0 e otoGar3.GL873575 10940536 699 - 12073884 I e saiBol1.JH378287 1279723 644 - 2905041 I e aotNan1.NW_018494782v1 1490184 531 - 1813869 I e cebCap1.NW_016107695v1 1236213 911 - 2164891 I e calJac3.chr4 169866452 629 + 171630274 I e dasNov3.JH569188 544925 1453 + 760995 I e canFam3.chr1 56161027 1683 + 122678785 I e chlSab2.chr13 96657985 6 + 98384682 T e nomLeu3.chr3 156289417 0 + 157873769 C e macNem1.NW_012011000v1 8348657 116 + 10161646 I e panPan2.chr6 171780864 110 + 173848474 I a score=126815.000000 s hg38.chr6_KB021644v2_alt 90518 62 + 185823 ACAGAATGGCTGTCGTCCCAAAGTCTG------AGTTTACCAGGCGTTGAGGAAGAGACCGATGCCTT s panTro5.chr6 173542337 62 + 175400573 acagaatggccgtcatcccaaagtctg------agtttgccaggtgttgaagaagaGACCGATGCCTT i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11463011 62 - 12463322 ACAGAATGGCTGTCGTCTCAAAGTCTG------AGGTTACCAGACGTTGAGGAAGAGACCGATGCCTT i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170316452 62 + 172585720 AGAGAATGGCTGTCGTCTCAAAGACTG------AGGTTACCAGGTGTTGAAGAAGAGACCGATGCCTT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169062215 68 - 170955103 AGAGAATGGCTGTCGTCTCGAAGTCTGAGGTTAAGGTTACCAGGCATTGAAGAAGAGACGGGTGCTTT i macFas5.chr4 C 0 T 203 s cerAty1.NW_012002071v1 1379655 68 + 3144229 AGAGAATGGCTGTCGTCTCACCGTCTGAGGTTAAGGTTACCAGGCATTGAAGAAGAGACGGGTGCTTT i cerAty1.NW_012002071v1 C 0 C 0 s manLeu1.NW_012106474v1 8202928 62 - 10857215 ACAGAATGGCTGTCATCTCGAAGTCTG------AGGTAGCCAGGCATTGAAGAAGAGACTGGTGCCTT i manLeu1.NW_012106474v1 T 138 C 0 s colAng1.NW_012114488v1 15597016 62 - 23502949 acagaatggctgtcgtctcaaagtctg------aggttaccaagcgttgaagaagagactgatgcctt i colAng1.NW_012114488v1 C 0 C 0 e otoGar3.GL873575 10940536 699 - 12073884 I e saiBol1.JH378287 1279723 644 - 2905041 I e aotNan1.NW_018494782v1 1490184 531 - 1813869 I e cebCap1.NW_016107695v1 1236213 911 - 2164891 I e calJac3.chr4 169866452 629 + 171630274 I e dasNov3.JH569188 544925 1453 + 760995 I e canFam3.chr1 56161027 1683 + 122678785 I e chlSab2.chr13 96657985 6 + 98384682 T e nomLeu3.chr3 156289417 0 + 157873769 C e macNem1.NW_012011000v1 8348657 116 + 10161646 I e panPan2.chr6 171780864 110 + 173848474 I a score=7294.000000 s hg38.chr6_KB021644v2_alt 90580 3 + 185823 CCT s panTro5.chr6 173542399 3 + 175400573 CCT i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11463073 3 - 12463322 CCT i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170316514 3 + 172585720 CCT i rheMac8.chr4 C 0 T 196 s macFas5.chr4 169062080 3 - 170955103 ccc i macFas5.chr4 T 203 C 0 s cerAty1.NW_012002071v1 1379723 3 + 3144229 CCT i cerAty1.NW_012002071v1 C 0 C 0 s manLeu1.NW_012106474v1 8202990 3 - 10857215 CCT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15597078 3 - 23502949 cct i colAng1.NW_012114488v1 C 0 C 0 e otoGar3.GL873575 10940536 699 - 12073884 I e saiBol1.JH378287 1279723 644 - 2905041 I e aotNan1.NW_018494782v1 1490184 531 - 1813869 I e cebCap1.NW_016107695v1 1236213 911 - 2164891 I e calJac3.chr4 169866452 629 + 171630274 I e dasNov3.JH569188 544925 1453 + 760995 I e canFam3.chr1 56161027 1683 + 122678785 I e chlSab2.chr13 96657985 6 + 98384682 T e nomLeu3.chr3 156289417 0 + 157873769 C e macNem1.NW_012011000v1 8348657 116 + 10161646 I e panPan2.chr6 171780864 110 + 173848474 I a score=1911.000000 s hg38.chr6_KB021644v2_alt 90583 1 + 185823 A s panTro5.chr6 173542402 1 + 175400573 A i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11463076 1 - 12463322 A i gorGor5.CYUI01015032v1 C 0 C 0 s macFas5.chr4 169062083 1 - 170955103 a i macFas5.chr4 C 0 C 0 s cerAty1.NW_012002071v1 1379726 1 + 3144229 A i cerAty1.NW_012002071v1 C 0 C 0 s manLeu1.NW_012106474v1 8202993 1 - 10857215 A i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15597081 1 - 23502949 a i colAng1.NW_012114488v1 C 0 T 66 e otoGar3.GL873575 10940536 699 - 12073884 I e saiBol1.JH378287 1279723 644 - 2905041 I e aotNan1.NW_018494782v1 1490184 531 - 1813869 I e cebCap1.NW_016107695v1 1236213 911 - 2164891 I e calJac3.chr4 169866452 629 + 171630274 I e dasNov3.JH569188 544925 1453 + 760995 I e canFam3.chr1 56161027 1683 + 122678785 I e chlSab2.chr13 96657985 6 + 98384682 T e nomLeu3.chr3 156289417 0 + 157873769 C e macNem1.NW_012011000v1 8348657 116 + 10161646 I e rheMac8.chr4 170316517 196 + 172585720 T e panPan2.chr6 171780864 110 + 173848474 I a score=1911.000000 s hg38.chr6_KB021644v2_alt 90584 1 + 185823 A s panTro5.chr6 173542403 1 + 175400573 A i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11463077 1 - 12463322 A i gorGor5.CYUI01015032v1 C 0 C 0 s macFas5.chr4 169062084 1 - 170955103 a i macFas5.chr4 C 0 C 0 s cerAty1.NW_012002071v1 1379727 1 + 3144229 A i cerAty1.NW_012002071v1 C 0 T 203 s manLeu1.NW_012106474v1 8202994 1 - 10857215 A i manLeu1.NW_012106474v1 C 0 T 131 s colAng1.NW_012114488v1 15597016 1 - 23502949 a i colAng1.NW_012114488v1 T 66 C 0 e otoGar3.GL873575 10940536 699 - 12073884 I e saiBol1.JH378287 1279723 644 - 2905041 I e aotNan1.NW_018494782v1 1490184 531 - 1813869 I e cebCap1.NW_016107695v1 1236213 911 - 2164891 I e calJac3.chr4 169866452 629 + 171630274 I e dasNov3.JH569188 544925 1453 + 760995 I e canFam3.chr1 56161027 1683 + 122678785 I e chlSab2.chr13 96657985 6 + 98384682 T e nomLeu3.chr3 156289417 0 + 157873769 C e macNem1.NW_012011000v1 8348657 116 + 10161646 I e rheMac8.chr4 170316517 196 + 172585720 T e panPan2.chr6 171780864 110 + 173848474 I a score=63025.000000 s hg38.chr6_KB021644v2_alt 90585 26 + 185823 CAGAATGGCTGTCGTCCCAAAGTCTG s panTro5.chr6 173542404 26 + 175400573 CAGAATGGCTGTCGTCTCAAAGTCTG i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11463078 26 - 12463322 CAGAATGGCTGTCGTCTCAAAGTCTG i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170316321 26 + 172585720 CAGAATGGCTGTCGTCTCAAAGACTG i rheMac8.chr4 T 196 C 0 s macFas5.chr4 169062085 26 - 170955103 cagaatggctgtcatctcgaagtctg i macFas5.chr4 C 0 C 0 s cerAty1.NW_012002071v1 1379525 26 + 3144229 CAGAATGGCTGTCGTCTCAAAGACTG i cerAty1.NW_012002071v1 T 203 C 0 s manLeu1.NW_012106474v1 8202864 26 - 10857215 CAGAATGGCTGTCATCTCAAAGACTG i manLeu1.NW_012106474v1 T 131 C 0 s colAng1.NW_012114488v1 15597017 26 - 23502949 cagaatggctgtcgtctcaaagtctg i colAng1.NW_012114488v1 C 0 C 0 e otoGar3.GL873575 10940536 699 - 12073884 I e saiBol1.JH378287 1279723 644 - 2905041 I e aotNan1.NW_018494782v1 1490184 531 - 1813869 I e cebCap1.NW_016107695v1 1236213 911 - 2164891 I e calJac3.chr4 169866452 629 + 171630274 I e dasNov3.JH569188 544925 1453 + 760995 I e canFam3.chr1 56161027 1683 + 122678785 I e chlSab2.chr13 96657985 6 + 98384682 T e nomLeu3.chr3 156289417 0 + 157873769 C e macNem1.NW_012011000v1 8348657 116 + 10161646 I e panPan2.chr6 171780864 110 + 173848474 I a score=118184.000000 s hg38.chr6_KB021644v2_alt 90611 39 + 185823 AGGTTACCAGGCGTTGAGGAAGAGACCGATGCCTTCCTA s panTro5.chr6 173542430 39 + 175400573 AGGTTACCAGGCGTTGAAGAAGAGACCGATGCCTTCCTA i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11463104 39 - 12463322 AGGTTACCAGGTGTTGAGGAAGAGACCGATGCCTTCCTA i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170316347 39 + 172585720 AGGTTACCAGGTGTTGAAGAAGAGACCGGTGCCTTCCTA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169062111 39 - 170955103 aggttaccaggtgttgaagaagaGACCAGTGCCTTCCTA i macFas5.chr4 C 0 C 0 s cerAty1.NW_012002071v1 1379551 39 + 3144229 AGGTTACCAGGTGTTGAAGAAGAGACCGGTGCCTTCCTA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96657979 39 + 98384682 AGGTTACCAGGCATTGAAGAAGAGACAGGTGCTTTCCTA i chlSab2.chr13 T 6 C 0 s manLeu1.NW_012106474v1 8202890 39 - 10857215 AGGTAACCAGGCATTGAAGAAGAGACCGGTGCCTTCCTA i manLeu1.NW_012106474v1 C 0 T 65 s colAng1.NW_012114488v1 15597043 39 - 23502949 aggttaccaagcgttgaagaagagactgatgccttccta i colAng1.NW_012114488v1 C 0 T 203 e otoGar3.GL873575 10940536 699 - 12073884 I e saiBol1.JH378287 1279723 644 - 2905041 I e aotNan1.NW_018494782v1 1490184 531 - 1813869 I e cebCap1.NW_016107695v1 1236213 911 - 2164891 I e calJac3.chr4 169866452 629 + 171630274 I e dasNov3.JH569188 544925 1453 + 760995 I e canFam3.chr1 56161027 1683 + 122678785 I e nomLeu3.chr3 156289417 0 + 157873769 C e macNem1.NW_012011000v1 8348657 116 + 10161646 I e panPan2.chr6 171780864 110 + 173848474 I a score=-130.000000 s hg38.chr6_KB021644v2_alt 90650 1 + 185823 A s panTro5.chr6 173542469 1 + 175400573 A i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11463143 1 - 12463322 A i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170316386 1 + 172585720 A i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169062150 1 - 170955103 C i macFas5.chr4 C 0 C 0 s cerAty1.NW_012002071v1 1379590 1 + 3144229 C i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96658018 1 + 98384682 A i chlSab2.chr13 C 0 C 0 e otoGar3.GL873575 10940536 699 - 12073884 I e saiBol1.JH378287 1279723 644 - 2905041 I e aotNan1.NW_018494782v1 1490184 531 - 1813869 I e cebCap1.NW_016107695v1 1236213 911 - 2164891 I e calJac3.chr4 169866452 629 + 171630274 I e dasNov3.JH569188 544925 1453 + 760995 I e colAng1.NW_012114488v1 15597082 203 - 23502949 T e canFam3.chr1 56161027 1683 + 122678785 I e nomLeu3.chr3 156289417 0 + 157873769 C e manLeu1.NW_012106474v1 8202929 65 - 10857215 T e macNem1.NW_012011000v1 8348657 116 + 10161646 I e panPan2.chr6 171780864 110 + 173848474 I a score=75627.000000 s hg38.chr6_KB021644v2_alt 90651 26 + 185823 CAGAATGGCTGTCGTCCCAAAGTCTG s panTro5.chr6 173542470 26 + 175400573 Cagaatggctgtcgtcccaaagtctg i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11463144 26 - 12463322 CAGAATGGCTGTCGTCTCAAAGTCTG i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170316387 26 + 172585720 GAGAATGGCTGTCGTCTCGAAGTCTG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169062151 25 - 170955103 -AGAATGGCTGTCGTCTCAAAGACTG i macFas5.chr4 C 0 C 0 s cerAty1.NW_012002071v1 1379591 25 + 3144229 -AGAATGGCTGTCATCTCGAAGTCTG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96658019 26 + 98384682 CAGAATGGCTTTCGTCTCaaagtctg i chlSab2.chr13 C 0 T 66 s manLeu1.NW_012106474v1 8202864 26 - 10857215 CAGAATGGCTGTCATCTCAAAGACTG i manLeu1.NW_012106474v1 T 65 C 0 s colAng1.NW_012114488v1 15596879 26 - 23502949 CAGAATGGCTGTCATCTCAAAGTCTG i colAng1.NW_012114488v1 T 203 C 0 e otoGar3.GL873575 10940536 699 - 12073884 I e saiBol1.JH378287 1279723 644 - 2905041 I e aotNan1.NW_018494782v1 1490184 531 - 1813869 I e cebCap1.NW_016107695v1 1236213 911 - 2164891 I e calJac3.chr4 169866452 629 + 171630274 I e dasNov3.JH569188 544925 1453 + 760995 I e canFam3.chr1 56161027 1683 + 122678785 I e nomLeu3.chr3 156289417 0 + 157873769 C e macNem1.NW_012011000v1 8348657 116 + 10161646 I e panPan2.chr6 171780864 110 + 173848474 I a score=50395.000000 s hg38.chr6_KB021644v2_alt 90677 18 + 185823 AGGTTACCAGGCGTTGAG s panTro5.chr6 173542496 18 + 175400573 aggttaccaggcattgaa i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11463170 18 - 12463322 AGGTTACCAGACGTTGAG i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170316413 18 + 172585720 AGGTTACCAGGTGTTGAA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169062176 18 - 170955103 AGGTTACCAGGTGTTGAA i macFas5.chr4 C 0 C 0 s cerAty1.NW_012002071v1 1379616 18 + 3144229 AGGTAGCCAGGCGTTGAA i cerAty1.NW_012002071v1 C 0 T 65 s chlSab2.chr13 96657979 18 + 98384682 AGGTTACCAGGCATTGAA i chlSab2.chr13 T 66 C 0 s manLeu1.NW_012106474v1 8202890 18 - 10857215 AGGTAACCAGGCATTGAA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15596905 18 - 23502949 AGGTTACCAGGTGTTGAA i colAng1.NW_012114488v1 C 0 C 0 e otoGar3.GL873575 10940536 699 - 12073884 I e saiBol1.JH378287 1279723 644 - 2905041 I e aotNan1.NW_018494782v1 1490184 531 - 1813869 I e cebCap1.NW_016107695v1 1236213 911 - 2164891 I e calJac3.chr4 169866452 629 + 171630274 I e dasNov3.JH569188 544925 1453 + 760995 I e canFam3.chr1 56161027 1683 + 122678785 I e nomLeu3.chr3 156289417 0 + 157873769 C e macNem1.NW_012011000v1 8348657 116 + 10161646 I e panPan2.chr6 171780864 110 + 173848474 I a score=53534.000000 s hg38.chr6_KB021644v2_alt 90695 17 + 185823 GAAGAGACCGATGCCTT s panTro5.chr6 173542514 17 + 175400573 gaagagaccggtgcttt i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11463188 17 - 12463322 GAAGAGACCGATGCCTT i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170316431 17 + 172585720 GAAGAGACCGGTGCCTT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169062194 17 - 170955103 GAAGAGACCGGTGCCTT i macFas5.chr4 C 0 T 131 s cerAty1.NW_012002071v1 1379569 17 + 3144229 GAAGAGACCGGTGCCTT i cerAty1.NW_012002071v1 T 65 C 0 s chlSab2.chr13 96657997 17 + 98384682 GAAGAGACAGGTGCTTT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8202908 17 - 10857215 GAAGAGACCGGTGCCTT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15596923 17 - 23502949 GAAGAGACCGGTGCCTT i colAng1.NW_012114488v1 C 0 C 0 e otoGar3.GL873575 10940536 699 - 12073884 I e saiBol1.JH378287 1279723 644 - 2905041 I e aotNan1.NW_018494782v1 1490184 531 - 1813869 I e cebCap1.NW_016107695v1 1236213 911 - 2164891 I e calJac3.chr4 169866452 629 + 171630274 I e dasNov3.JH569188 544925 1453 + 760995 I e canFam3.chr1 56161027 1683 + 122678785 I e nomLeu3.chr3 156289417 0 + 157873769 C e macNem1.NW_012011000v1 8348657 116 + 10161646 I e panPan2.chr6 171780864 110 + 173848474 I a score=9500.000000 s hg38.chr6_KB021644v2_alt 90712 3 + 185823 CCT s panTro5.chr6 173542531 3 + 175400573 cct i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11463205 3 - 12463322 CCT i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170316448 3 + 172585720 CCT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169062080 3 - 170955103 ccc i macFas5.chr4 T 131 C 0 s cerAty1.NW_012002071v1 1379586 3 + 3144229 CCT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96658014 3 + 98384682 CCT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8202925 3 - 10857215 CCT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15596940 3 - 23502949 CCT i colAng1.NW_012114488v1 C 0 T 131 e otoGar3.GL873575 10940536 699 - 12073884 I e saiBol1.JH378287 1279723 644 - 2905041 I e aotNan1.NW_018494782v1 1490184 531 - 1813869 I e cebCap1.NW_016107695v1 1236213 911 - 2164891 I e calJac3.chr4 169866452 629 + 171630274 I e dasNov3.JH569188 544925 1453 + 760995 I e canFam3.chr1 56161027 1683 + 122678785 I e nomLeu3.chr3 156289417 0 + 157873769 C e macNem1.NW_012011000v1 8348657 116 + 10161646 I e panPan2.chr6 171780864 110 + 173848474 I a score=3276.000000 s hg38.chr6_KB021644v2_alt 90715 1 + 185823 A s panTro5.chr6 173542534 1 + 175400573 a i panTro5.chr6 C 0 T 132 s gorGor5.CYUI01015032v1 11463208 1 - 12463322 A i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170316451 1 + 172585720 A i rheMac8.chr4 C 0 I 65 s macFas5.chr4 169062083 1 - 170955103 a i macFas5.chr4 C 0 C 0 s cerAty1.NW_012002071v1 1379589 1 + 3144229 A i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96658017 1 + 98384682 A i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8202928 1 - 10857215 A i manLeu1.NW_012106474v1 C 0 T 65 s colAng1.NW_012114488v1 15596812 1 - 23502949 A i colAng1.NW_012114488v1 T 131 C 0 e otoGar3.GL873575 10940536 699 - 12073884 I e saiBol1.JH378287 1279723 644 - 2905041 I e aotNan1.NW_018494782v1 1490184 531 - 1813869 I e cebCap1.NW_016107695v1 1236213 911 - 2164891 I e calJac3.chr4 169866452 629 + 171630274 I e dasNov3.JH569188 544925 1453 + 760995 I e canFam3.chr1 56161027 1683 + 122678785 I e nomLeu3.chr3 156289417 0 + 157873769 C e macNem1.NW_012011000v1 8348657 116 + 10161646 I e panPan2.chr6 171780864 110 + 173848474 I a score=1911.000000 s hg38.chr6_KB021644v2_alt 90716 1 + 185823 A s panTro5.chr6 173542403 1 + 175400573 A i panTro5.chr6 T 132 C 0 s gorGor5.CYUI01015032v1 11463209 1 - 12463322 A i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170316517 1 + 172585720 A i rheMac8.chr4 I 65 C 0 s macFas5.chr4 169062084 1 - 170955103 a i macFas5.chr4 C 0 C 0 s chlSab2.chr13 96658018 1 + 98384682 A i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15596813 1 - 23502949 A i colAng1.NW_012114488v1 C 0 C 0 e otoGar3.GL873575 10940536 699 - 12073884 I e saiBol1.JH378287 1279723 644 - 2905041 I e aotNan1.NW_018494782v1 1490184 531 - 1813869 I e cebCap1.NW_016107695v1 1236213 911 - 2164891 I e calJac3.chr4 169866452 629 + 171630274 I e dasNov3.JH569188 544925 1453 + 760995 I e canFam3.chr1 56161027 1683 + 122678785 I e cerAty1.NW_012002071v1 1379590 0 + 3144229 C e nomLeu3.chr3 156289417 0 + 157873769 C e manLeu1.NW_012106474v1 8202929 65 - 10857215 T e macNem1.NW_012011000v1 8348657 116 + 10161646 I e panPan2.chr6 171780864 110 + 173848474 I a score=80307.000000 s hg38.chr6_KB021644v2_alt 90717 26 + 185823 CAGAATGGCTGTCGTCTCAAAGTCTG s panTro5.chr6 173542404 26 + 175400573 CAGAATGGCTGTCGTCTCAAAGTCTG i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11463210 26 - 12463322 CAGAATGGCTGTCGTCTCAAAGTCTG i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170316518 26 + 172585720 CAGAATGGCTGTCGTCTCAAAGACTG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169062085 26 - 170955103 cagaatggctgtcatctcgaagtctg i macFas5.chr4 C 0 C 0 s cerAty1.NW_012002071v1 1379590 26 + 3144229 CAGAATGGCTGTCATCTCGAAGTCTG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96658019 26 + 98384682 CAGAATGGCTTTCGTCTCaaagtctg i chlSab2.chr13 C 0 T 66 s manLeu1.NW_012106474v1 8202864 26 - 10857215 CAGAATGGCTGTCATCTCAAAGACTG i manLeu1.NW_012106474v1 T 65 C 0 s colAng1.NW_012114488v1 15596814 26 - 23502949 CAGAATGGCTGTCATCTCAAAGTCTG i colAng1.NW_012114488v1 C 0 C 0 e otoGar3.GL873575 10940536 699 - 12073884 I e saiBol1.JH378287 1279723 644 - 2905041 I e aotNan1.NW_018494782v1 1490184 531 - 1813869 I e cebCap1.NW_016107695v1 1236213 911 - 2164891 I e calJac3.chr4 169866452 629 + 171630274 I e dasNov3.JH569188 544925 1453 + 760995 I e canFam3.chr1 56161027 1683 + 122678785 I e nomLeu3.chr3 156289417 0 + 157873769 C e macNem1.NW_012011000v1 8348657 116 + 10161646 I e panPan2.chr6 171780864 110 + 173848474 I a score=10476.000000 s hg38.chr6_KB021644v2_alt 90743 3 + 185823 AGG s panTro5.chr6 173542430 3 + 175400573 AGG i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11463236 3 - 12463322 AGG i gorGor5.CYUI01015032v1 C 0 T 66 s rheMac8.chr4 170316544 3 + 172585720 AGG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169062111 3 - 170955103 agg i macFas5.chr4 C 0 C 0 s cerAty1.NW_012002071v1 1379616 3 + 3144229 AGG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96657979 3 + 98384682 AGG i chlSab2.chr13 T 66 C 0 s manLeu1.NW_012106474v1 8202890 3 - 10857215 AGG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15596840 3 - 23502949 AGG i colAng1.NW_012114488v1 C 0 C 0 e otoGar3.GL873575 10940536 699 - 12073884 I e saiBol1.JH378287 1279723 644 - 2905041 I e aotNan1.NW_018494782v1 1490184 531 - 1813869 I e cebCap1.NW_016107695v1 1236213 911 - 2164891 I e calJac3.chr4 169866452 629 + 171630274 I e dasNov3.JH569188 544925 1453 + 760995 I e canFam3.chr1 56161027 1683 + 122678785 I e nomLeu3.chr3 156289417 0 + 157873769 C e macNem1.NW_012011000v1 8348657 116 + 10161646 I e panPan2.chr6 171780864 110 + 173848474 I a score=264156.000000 s hg38.chr6_KB021644v2_alt 90746 97 + 185823 TTACCAGGCATTGAAGAAGAGACCGATGCCTTCCTAAC-AGAATGGCTGTCGTCCCA------AAGTCTGAGGTTACCAGGCGTTGAGGAAGAGACCGATGCCT s panTro5.chr6 173542433 97 + 175400573 TTACCAGGCGTTGAAGAAGAGACCGATGCCTTCCTAAC-agaatggctgtcgtccca------aagtctgaggttaccaggcattgaagaagagaccggtgctt i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11463173 97 - 12463322 TTACCAGACGTTGAGGAAGAGACCGATGCCTTCCTAAC-AGAATGGCTGTCGTCTCA------AAGTCTGAGGTTACCAGGTGTTGAAGAAGAGACCGATGCCT i gorGor5.CYUI01015032v1 T 66 C 0 s rheMac8.chr4 170316547 96 + 172585720 TTACCAGGTGTTGAAGAAGAGACCGGTGCCTTCCT-AC-AGAATGGCTGTCGTCTCA------AAGACTGAGGTTACCAGGTGTTGAAGAAGAGACCGGTGCCT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169062114 96 - 170955103 ttaccaggtgttgaagaagaGACCAGTGCCTTCCT-AC-AGAATGGCTGTCGTCTCA------AAGACTGAGGTTACCAGGTGTTGAAGAAGAGACCGGTGCCT i macFas5.chr4 C 0 C 0 s cerAty1.NW_012002071v1 1379619 103 + 3144229 TAGCCAGGCGTTGAAGAAGAGACTGGTGCCTTCCT-AAGAGAATGGCTGTCGTCTCACCGTCTGAGGTTAAGGTTACCAGGCATTGAAGAAGAGACGGGTGCTT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96657982 97 + 98384682 TTACCAGGCATTGAAGAAGAGACAGGTGCTTTCCTAAC-AGAATGGCTTTCGTCTCa------aagtctgaggttaccaagtgttgaagaagagaccagtgcct i chlSab2.chr13 C 0 T 138 s manLeu1.NW_012106474v1 8202893 96 - 10857215 TAACCAGGCATTGAAGAAGAGACCGGTGCCTTCCT-AC-AGAATGGCTGTCATCTCG------AAGTCTGAGGTAGCCAGGCATTGAAGAAGAGACTGGTGCCT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15596843 96 - 23502949 TTACCAGGCATTGAAGAAGAGACCAGTGCCTTCCT-AC-AGAATGGCTGTCATCTCA------AAGTCTGAGGTTACCAGGTGTTGAAGAAGAGACCGGTGCCT i colAng1.NW_012114488v1 C 0 C 0 e otoGar3.GL873575 10940536 699 - 12073884 I e saiBol1.JH378287 1279723 644 - 2905041 I e aotNan1.NW_018494782v1 1490184 531 - 1813869 I e cebCap1.NW_016107695v1 1236213 911 - 2164891 I e calJac3.chr4 169866452 629 + 171630274 I e dasNov3.JH569188 544925 1453 + 760995 I e canFam3.chr1 56161027 1683 + 122678785 I e nomLeu3.chr3 156289417 0 + 157873769 C e macNem1.NW_012011000v1 8348657 116 + 10161646 I e panPan2.chr6 171780864 110 + 173848474 I a score=13752.000000 s hg38.chr6_KB021644v2_alt 90843 4 + 185823 TCCT s panTro5.chr6 173542530 4 + 175400573 tcct i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11463270 4 - 12463322 TCCT i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170316643 4 + 172585720 TCCT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169062210 4 - 170955103 TCCT i macFas5.chr4 C 0 C 0 s cerAty1.NW_012002071v1 1379722 4 + 3144229 TCCT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96657941 4 + 98384682 TCCT i chlSab2.chr13 T 138 C 0 s manLeu1.NW_012106474v1 8202989 4 - 10857215 TCCT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15596939 4 - 23502949 TCCT i colAng1.NW_012114488v1 C 0 C 0 e otoGar3.GL873575 10940536 699 - 12073884 I e saiBol1.JH378287 1279723 644 - 2905041 I e aotNan1.NW_018494782v1 1490184 531 - 1813869 I e cebCap1.NW_016107695v1 1236213 911 - 2164891 I e calJac3.chr4 169866452 629 + 171630274 I e dasNov3.JH569188 544925 1453 + 760995 I e canFam3.chr1 56161027 1683 + 122678785 I e nomLeu3.chr3 156289417 0 + 157873769 C e macNem1.NW_012011000v1 8348657 116 + 10161646 I e panPan2.chr6 171780864 110 + 173848474 I a score=5005.000000 s hg38.chr6_KB021644v2_alt 90847 1 + 185823 A s panTro5.chr6 173542534 1 + 175400573 a i panTro5.chr6 C 0 T 66 s panPan2.chr6 171780974 1 + 173848474 a i panPan2.chr6 I 110 C 0 s gorGor5.CYUI01015032v1 11463274 1 - 12463322 A i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170316647 1 + 172585720 A i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169062214 1 - 170955103 A i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8348773 1 + 10161646 a i macNem1.NW_012011000v1 I 116 C 0 s cerAty1.NW_012002071v1 1379726 1 + 3144229 A i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96657945 1 + 98384682 A i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8202993 1 - 10857215 A i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15596943 1 - 23502949 A i colAng1.NW_012114488v1 C 0 C 0 e otoGar3.GL873575 10940536 699 - 12073884 I e saiBol1.JH378287 1279723 644 - 2905041 I e aotNan1.NW_018494782v1 1490184 531 - 1813869 I e cebCap1.NW_016107695v1 1236213 911 - 2164891 I e calJac3.chr4 169866452 629 + 171630274 I e dasNov3.JH569188 544925 1453 + 760995 I e canFam3.chr1 56161027 1683 + 122678785 I e nomLeu3.chr3 156289417 0 + 157873769 C a score=126275.000000 s hg38.chr6_KB021644v2_alt 90848 29 + 185823 ACAGAATGGCTGTCGTCTCAAAGTCTGAG s panTro5.chr6 173542469 29 + 175400573 ACagaatggctgtcgtcccaaagtctgag i panTro5.chr6 T 66 C 0 s panPan2.chr6 171780975 29 + 173848474 acagaatggccgtcatcccaaagtctgag i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11463275 29 - 12463322 ACAGAATGGCTGTCGTCCCAAAGTCTGAG i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170316648 29 + 172585720 AGAGAACGGCTGTCGTCTCGAAGTCTGAG i rheMac8.chr4 C 0 I 7 s macFas5.chr4 169062215 29 - 170955103 AGAGAATGGCTGTCGTCTCGAAGTCTGAG i macFas5.chr4 C 0 I 7 s macNem1.NW_012011000v1 8348774 29 + 10161646 acagaatggctGTCATCTCGAAGTCTGAG i macNem1.NW_012011000v1 C 0 I 7 s cerAty1.NW_012002071v1 1379727 29 + 3144229 ACAGAATGGCTTTCGTCTCaaagtctgag i cerAty1.NW_012002071v1 C 0 I 1 s chlSab2.chr13 96657946 29 + 98384682 AGAGAATGGCTGTTGTCTCAACGTCTGAG i chlSab2.chr13 C 0 I 1 s manLeu1.NW_012106474v1 8202994 29 - 10857215 AGAGAATGGCTGTCGTCTCAACATCTGAG i manLeu1.NW_012106474v1 C 0 I 1 s colAng1.NW_012114488v1 15596944 29 - 23502949 AGAGAATGGCTGTCGTCTCAAAGTCTGAG i colAng1.NW_012114488v1 C 0 C 0 e otoGar3.GL873575 10940536 699 - 12073884 I e saiBol1.JH378287 1279723 644 - 2905041 I e aotNan1.NW_018494782v1 1490184 531 - 1813869 I e cebCap1.NW_016107695v1 1236213 911 - 2164891 I e calJac3.chr4 169866452 629 + 171630274 I e dasNov3.JH569188 544925 1453 + 760995 I e canFam3.chr1 56161027 1683 + 122678785 I e nomLeu3.chr3 156289417 0 + 157873769 C a score=-293.000000 s hg38.chr6_KB021644v2_alt 90877 1 + 185823 T s panTro5.chr6 173542498 1 + 175400573 g i panTro5.chr6 C 0 C 0 s panPan2.chr6 171781004 1 + 173848474 t i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11463304 1 - 12463322 G i gorGor5.CYUI01015032v1 C 0 T 66 s colAng1.NW_012114488v1 15596973 1 - 23502949 G i colAng1.NW_012114488v1 C 0 C 0 e otoGar3.GL873575 10940536 699 - 12073884 I e saiBol1.JH378287 1279723 644 - 2905041 I e aotNan1.NW_018494782v1 1490184 531 - 1813869 I e cebCap1.NW_016107695v1 1236213 911 - 2164891 I e calJac3.chr4 169866452 629 + 171630274 I e dasNov3.JH569188 544925 1453 + 760995 I e canFam3.chr1 56161027 1683 + 122678785 I e chlSab2.chr13 96657975 1 + 98384682 I e cerAty1.NW_012002071v1 1379756 1 + 3144229 I e nomLeu3.chr3 156289417 0 + 157873769 C e manLeu1.NW_012106474v1 8203023 1 - 10857215 I e macNem1.NW_012011000v1 8348803 7 + 10161646 I e rheMac8.chr4 170316677 7 + 172585720 I e macFas5.chr4 169062244 7 - 170955103 I a score=11187.000000 s hg38.chr6_KB021644v2_alt 90878 3 + 185823 TTA s panTro5.chr6 173542499 3 + 175400573 tta i panTro5.chr6 C 0 C 0 s panPan2.chr6 171781005 3 + 173848474 ttg i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11463239 3 - 12463322 TTA i gorGor5.CYUI01015032v1 T 66 C 0 s rheMac8.chr4 170316684 3 + 172585720 TTA i rheMac8.chr4 I 7 C 0 s macFas5.chr4 169062251 3 - 170955103 TTA i macFas5.chr4 I 7 C 0 s macNem1.NW_012011000v1 8348810 3 + 10161646 TTA i macNem1.NW_012011000v1 I 7 C 0 s chlSab2.chr13 96657976 3 + 98384682 TTA i chlSab2.chr13 I 1 I 6 s manLeu1.NW_012106474v1 8203024 3 - 10857215 TTA i manLeu1.NW_012106474v1 I 1 I 6 s colAng1.NW_012114488v1 15596974 3 - 23502949 TTA i colAng1.NW_012114488v1 C 0 I 6 e otoGar3.GL873575 10940536 699 - 12073884 I e saiBol1.JH378287 1279723 644 - 2905041 I e aotNan1.NW_018494782v1 1490184 531 - 1813869 I e cebCap1.NW_016107695v1 1236213 911 - 2164891 I e calJac3.chr4 169866452 629 + 171630274 I e dasNov3.JH569188 544925 1453 + 760995 I e canFam3.chr1 56161027 1683 + 122678785 I e cerAty1.NW_012002071v1 1379756 1 + 3144229 I e nomLeu3.chr3 156289417 0 + 157873769 C a score=26389.000000 s hg38.chr6_KB021644v2_alt 90881 7 + 185823 CCAGGCA s panTro5.chr6 173542502 7 + 175400573 ccaggca i panTro5.chr6 C 0 T 66 s panPan2.chr6 171781008 7 + 173848474 ccaggcg i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11463242 7 - 12463322 CCAGGTG i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170316687 7 + 172585720 CCAGGCA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169062254 7 - 170955103 CCAGGCA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8348813 7 + 10161646 CCAGGCA i macNem1.NW_012011000v1 C 0 C 0 s chlSab2.chr13 96657985 7 + 98384682 CCAGGCA i chlSab2.chr13 I 6 C 0 s manLeu1.NW_012106474v1 8203033 7 - 10857215 CCAGACA i manLeu1.NW_012106474v1 I 6 C 0 s colAng1.NW_012114488v1 15596983 7 - 23502949 CCAGGCA i colAng1.NW_012114488v1 I 6 C 0 e otoGar3.GL873575 10940536 699 - 12073884 I e saiBol1.JH378287 1279723 644 - 2905041 I e aotNan1.NW_018494782v1 1490184 531 - 1813869 I e cebCap1.NW_016107695v1 1236213 911 - 2164891 I e calJac3.chr4 169866452 629 + 171630274 I e dasNov3.JH569188 544925 1453 + 760995 I e canFam3.chr1 56161027 1683 + 122678785 I e cerAty1.NW_012002071v1 1379756 1 + 3144229 I e nomLeu3.chr3 156289417 0 + 157873769 C a score=12690.000000 s hg38.chr6_KB021644v2_alt 90888 3 + 185823 TTG s panTro5.chr6 173542443 3 + 175400573 TTG i panTro5.chr6 T 66 C 0 s panPan2.chr6 171781015 3 + 173848474 ttg i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11463249 3 - 12463322 TTG i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170316694 3 + 172585720 TTG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169062261 3 - 170955103 TTG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8348820 3 + 10161646 TTG i macNem1.NW_012011000v1 C 0 C 0 s chlSab2.chr13 96657992 3 + 98384682 TTG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8203040 3 - 10857215 TTG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15596990 3 - 23502949 TTG i colAng1.NW_012114488v1 C 0 C 0 e otoGar3.GL873575 10940536 699 - 12073884 I e saiBol1.JH378287 1279723 644 - 2905041 I e aotNan1.NW_018494782v1 1490184 531 - 1813869 I e cebCap1.NW_016107695v1 1236213 911 - 2164891 I e calJac3.chr4 169866452 629 + 171630274 I e dasNov3.JH569188 544925 1453 + 760995 I e canFam3.chr1 56161027 1683 + 122678785 I e cerAty1.NW_012002071v1 1379756 1 + 3144229 I e nomLeu3.chr3 156289417 0 + 157873769 C a score=76764.000000 s hg38.chr6_KB021644v2_alt 90891 22 + 185823 aagaagagaccgatgcc--ttcct s panTro5.chr6 173542446 22 + 175400573 AAGAAGAGACCGATGCC--TTCCT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171781018 22 + 173848474 aagaagaGACCGATGCC--TTCCT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11463252 22 - 12463322 AAGAAGAGACCGATGCC--TTCCT i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170316697 22 + 172585720 AAGAAGAGACGGGTGCT--TTCCT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169062264 22 - 170955103 AAGAAGAGACGGGTGCT--TTCCT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8348823 22 + 10161646 AAGAAGAGACGGGTGCT--TTCCT i macNem1.NW_012011000v1 C 0 C 0 s chlSab2.chr13 96657995 22 + 98384682 AAGAAGAGACAGGTGCT--TTCCT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8203043 22 - 10857215 AAGAAGAGATGGGTGCT--TTCCT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15596993 22 - 23502949 AAGAagagaccagtgct--ttcct i colAng1.NW_012114488v1 C 0 C 0 s dasNov3.JH569188 546378 22 + 760995 aatgagataccaccactcattc-- i dasNov3.JH569188 I 1453 C 0 e otoGar3.GL873575 10940536 699 - 12073884 I e saiBol1.JH378287 1279723 644 - 2905041 I e aotNan1.NW_018494782v1 1490184 531 - 1813869 I e cebCap1.NW_016107695v1 1236213 911 - 2164891 I e calJac3.chr4 169866452 629 + 171630274 I e canFam3.chr1 56161027 1683 + 122678785 I e cerAty1.NW_012002071v1 1379756 1 + 3144229 I e nomLeu3.chr3 156289417 0 + 157873769 C a score=2166345.000000 s hg38.chr6_KB021644v2_alt 90913 387 + 185823 aacagaatggctgtcgtcccaaagtctgaggttaccaggcgtt--gaagaa---gagaccggt--gctttcctacagtgctggtgggaatgttcaatg-gtacaagcattggaaaacattcactggaaagagattggcagtttattaaaaaatatgcatctacttactgtgtaaatcagcagttcggtcctataaatacac-ccaagataaaggaaagcacatgtccacacaaagacttgaatctgaa-tgttcatagcaccattactc-----------ataatagctccaaattagaaacgacctaagtgtccataaggagacacgtgaataagcacattgtggtgacactttcatactgttgggtattatttaccaattaggaaaaagc-agctacccatgcattc s panTro5.chr6 173542468 387 + 175400573 AACagaatggctgtcgtcccaaagtctgaggttaccaggcatt--gaagaa---gagaccggt--gctttcctacagtgctggtgggaatgttcaatg-gtacaagcattggaaaacactcactggaaagagattggcagtttattaaaaaatatgcatctacttactgtgtaaatcagcagttcggtcctataaatacac-ccaagataaaggaaagcacgtgtccacacaaagacttgaacctgaa-tgttcatagcaccattattc-----------ataatagctccaaattagaaacgacctaagtgtccataaggagacacgtgaataagcacattgtggtgacactttcataccgttgggtattatttaccaattaggaaaaagc-agctacccatgcattc i panTro5.chr6 C 0 C 0 s panPan2.chr6 171781040 387 + 173848474 AACagaatggctgtcgtcccaaagtctgaggttaccaggcgtt--gaagaa---gagaccggt--gctttcctacagtgctggtgggaatgttcaatg-gtacaagcattggaaaacattcactggaaagagattggcagtttattaaaaaatatgcatctacttactgtgtaaatcagcagttcggtcctataaatacac-ccaagataaaggaaagcacgtgtccacacaaagacttgaacctgaa-tgttcatagcaccgttactc-----------ataatagctccaaattacaaacgacctaagtgtctataaggagacacgtgaataagcacattgtggtgacactttcataccgttgggtattatttaccaattaggaaaaagc-agcttcccatgcattc i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11463274 388 - 12463322 AACAGAATGGCTGTCGTCCCAAAGTCTGAGGTTACCAGGTGTT--GAAGAA---GAGactggt--gctttcctacagtgctggtgggaatgttcaatg-gtacaagcattggaaaacattcactggaaagagattggcagtttattaaaaaatatgcatctacttactatgtaaatcagcagttcggtcctataaatacac-acaagataaaggaaagcacatgtccacacaaagacttgaacctgaa-tgttcatagcaccattactc-----------ataatagctccaaattagaaacgacctaagtgtccataaggagacacgtgaataagcacattgtggtgacactttcataccgttgggtattgtttaccaattaggagaaaacaagctacccatgcattc i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156289417 388 + 157873769 aacagaatggctgtcgtctcaaagtctgaggttaccaggcatt--gaagaa---gagaccggt--gcctttctacagtgctggtgggaatgttcaatg-gtacaagcattcgaaaacatccactggaaagagattgacagtttatttaaaaatatgcatctacttactgtgtaaatcagcagttcgatcctataaatacac-gcaagataaaggaaagcacatgtccacacaaagacttgaacctgaa-tgttcatagcaccattattc-----------ataatagctccaaattagaaacgacctaagtgtccatcaggagacacgtgaataagcacattgtggtgatacattcataccgttgggtattatttaccaattaggaaaaagcaagctaccaatgcattc i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170316719 399 + 172585720 AACAGAATGGCTTTCGTCTCaaagtctgaggttaccaggtgtt--gaagaa---gagaccggt--gccttcctatagtgctggtgggaatgttcaatgcctacacgcattggaaaacattcactggaaagagattgacagtttatttaaaactatgcatctgcttactgtataaatcagcagttcagtcctataaatacacaccaagataaaggaaatcacatgtc--cacagagacttgaagctgaa-tgttcatagcaccattattcataatttatttataatagttccaaattagaaacgacctaagggtccatcaggagacacgtgaataagcacattgtggcgatacattcataccattgggtattatttaccacttaggaagaaacaagctaccaatgcattc i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169062286 398 - 170955103 AACAGAATGGCTTTCGTCTCaaagtctgaggttaccaggtgtt--gaagaa---gagaccggt--gccttcctatagtgctggtgggaatgttcaatg-ctacacgcattggaaaacattcactggaaagagattgacagtttatttaaaactatgcatctgcttactgtataaatcagcagttcagtcctataaatacacaccaagataaaggaaatcacatgtc--cacagagacttgaagctgaa-tgttcatagcaccattattcataatttatttataatagttccaaattagaaacgacctaagtgtccatcaggagacacgtgaataagcacattgtggcgatacattcataccattgggtattatttaccacttaggaagaaacaagctaccaatgcattc i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8348845 398 + 10161646 AACAGAATGGCTTTCGTCTCaaagtctgaggttaccaggtgtt--gaagaa---gagaccggt--tccttcctatagtgctggtgggaatgttcaatg-ctacacgcattggaaaacattcactggaaagagattgacagtttatttaaaactatgcatctgcttactgtataaatcagcagttcagtcctataaatacacaccaagataaaggaaatcacatgtc--cacagagacttgaagctgaa-tgttcatagcaccattattcataatttatttataatagttccaaattagaaatgacctaagtgtccatcaggagacacgtgaataagcacattgtggcgatacattcataccattgggtattatttaccacttaggaagaaacaagctaccaatgcattc i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1379757 367 + 3144229 -------------------------------ttaccaagcgtt--gaagaa---gagactgat--gccttcctatagtgctggtgggaatgttcaacg-gtacacgtattggaaaacattcactggaaagagattgacagtttatttaaaaatatgcatctgcttactgtgtaaatcagcagttcagtcctataaatacacgccaagataaaggaaatcacatgtc--cacagagacttgaagctgaa-tgttcatagcaccattattcataatttattcataatagttccaaattagaaacgacctacgtgtccatcaggagacatgtgaataagcacattgtggtgatacattcataccattgggtattatttaccacttaggaagaaacaagctaccaatgcattc i cerAty1.NW_012002071v1 I 1 C 0 s chlSab2.chr13 96658017 397 + 98384682 AACAGAATGGCTTTCGTCTCaaagtctgaggttaccaagtgtt--gaagaa---gagaccagt--gcctacttatagtgctggtgggaatgttcaacg-gtacacgcattggaaaacattcactggaaagagattgacagtttatttaaaaatatgcatctgcttactgtataaatcagcagttcagtcctataaatacacgccaagataaaggaaatcacatgtc--cacagagacttgaagctgaa-tgtccatagcaccattattcataatttattcataatagttccaaattagaaacaacctacgtgtccattaggagacatgtgaataagcacattgtggtgatacattcata-cattgggtattatttaccacttaggaagaaacaagctatcaatgcattc i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8203065 398 - 10857215 AACAGAATGGCTTTCGTCTCaaagtctgagtttaccaagcgtt--gaagaa---gagaccgat--gccttcctatagtgctggtgggaatgttcaacg-gtacacgtattggaaaacattcactggaaagagattgacagtttatttaaaaatatgcatctgcttactgtgtaaatcagcagttcagtcctataaatacacgccaagataaaggaaatcacatgtc--cacagagacttgaagctgaa-tgttcatagcaccattattcataatttattcataatagttccaaattagaaacgacctaagtgtccatcaggagacacgtgaataagcacattgtggtgatacattcataccattgggtattatttaccacttaggaagaagcaagctaccaatgcattc i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15597015 397 - 23502949 aacagaatggctgtcgtctcaaagtctgaggttaccaagcgtt--gaagaa---gagactgat--gccttcctatagtgctggtgggaatgttcaacg-gtacacacattggaaaacattcactggaaagagattgacagtttatttaaaaatatgcatctgcttactgtataaatcagcagttcagtcctataaatacacgccaagataaaggaaatcacatgtc--cacagagacttgaagctgaa-tgttcatagcaccattattcataatttattcataatagctccaaattacagacgacctaagtgtccatcaggagacatgtgaataagcacattgtggtgatacattcata-cgttgggtgttatttaccacttaggaagaagcaagctaccaatgcattc i colAng1.NW_012114488v1 C 0 C 0 s dasNov3.JH569188 546400 371 + 760995 actagaatggcaataacttaaaagtttggcaatatcgagtgttgggaagaatgtgaaaatcatagaatttcatattttgttagtgggaatgtaaaatg-caacagacattttga----------gaaaagtgttt-----ttggtttttaattaagcttatacttaccatatgatccagcagtttgctcctaggaatatatcccaagaaaaatgaatacatatatcgatttcaagacttgtaggtgaatttttcataaaaccattattc-----------ataatagccaaaaatca-aagcaactcaaatgcccagaagaa-------aaataaacaactcatggt---atagctgtaccatggaatttcgtttacaaattttaaaaaggcaaaccaccaatacatgg i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10940536 699 - 12073884 I e saiBol1.JH378287 1279723 644 - 2905041 I e aotNan1.NW_018494782v1 1490184 531 - 1813869 I e cebCap1.NW_016107695v1 1236213 911 - 2164891 I e calJac3.chr4 169866452 629 + 171630274 I e canFam3.chr1 56161027 1683 + 122678785 I a score=8281.000000 s hg38.chr6_KB021644v2_alt 91300 1 + 185823 a s panTro5.chr6 173542855 1 + 175400573 a i panTro5.chr6 C 0 C 0 s panPan2.chr6 171781427 1 + 173848474 a i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11463662 1 - 12463322 a i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156289805 1 + 157873769 a i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170317118 1 + 172585720 a i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169062684 1 - 170955103 a i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8349243 1 + 10161646 a i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1380124 1 + 3144229 a i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96658414 1 + 98384682 a i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8203463 1 - 10857215 a i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15597412 1 - 23502949 a i colAng1.NW_012114488v1 C 0 C 0 s saiBol1.JH378287 1280367 1 - 2905041 a i saiBol1.JH378287 I 644 C 0 s dasNov3.JH569188 546771 1 + 760995 a i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10940536 699 - 12073884 I e aotNan1.NW_018494782v1 1490184 531 - 1813869 I e cebCap1.NW_016107695v1 1236213 911 - 2164891 I e calJac3.chr4 169866452 629 + 171630274 I e canFam3.chr1 56161027 1683 + 122678785 I a score=57121.000000 s hg38.chr6_KB021644v2_alt 91301 8 + 185823 aaaccctg s panTro5.chr6 173542856 8 + 175400573 aaaccctg i panTro5.chr6 C 0 C 0 s panPan2.chr6 171781428 8 + 173848474 aaaccctg i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11463663 8 - 12463322 aaaccctg i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156289806 8 + 157873769 aaaccctg i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170317119 8 + 172585720 aaaccctg i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169062685 8 - 170955103 aaaccctg i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8349244 8 + 10161646 aaaccctg i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1380125 8 + 3144229 aaaccctg i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96658415 8 + 98384682 aaaccctg i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8203464 8 - 10857215 aaaccctg i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15597413 8 - 23502949 aaaccctg i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169867081 8 + 171630274 aaacccca i calJac3.chr4 I 629 C 0 s saiBol1.JH378287 1280368 6 - 2905041 aaacct-- i saiBol1.JH378287 C 0 C 0 s dasNov3.JH569188 546772 8 + 760995 actacctg i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10940536 699 - 12073884 I e aotNan1.NW_018494782v1 1490184 531 - 1813869 I e cebCap1.NW_016107695v1 1236213 911 - 2164891 I e canFam3.chr1 56161027 1683 + 122678785 I a score=3115507.000000 s hg38.chr6_KB021644v2_alt 91309 365 + 185823 aatgagtcataaaca---catcgtgtagaata-gagagggcagacacagaggcatgtgtattgagtgttttacgtt-catgcaatttctagaa-----aaatctgtggagaaag-aaatcagtattcgggggggctaaga---gactggaggtgaactc----gaggcatgacggaaatttt-gggggtcatgggaatgttt-aaaactgaattatggtgttacat-cataactccataaattcaatgaaaatcattcaattatgcatttacaatgggtgaatattatgacatataaattgtaccacaataaagctgtgaaaaaaATGAAGATGACATAAAAATTTGTTTCaa------------ac-aaaaaccagatggg----------------------caaaatagaaacctaag s panTro5.chr6 173542864 369 + 175400573 aatgagtcacaaaca---catcgtgtagaata-gagagggcagacacagaggcatgcgtattgagtgttttacgtt-catacaatttctagaa-----aaatctgtggagaaag-aaatcagtatttgggggggctaaga---gactggaggtgaactcagatgaggcatgagggaaatttt-gggggtcatgggaatgttt-aaaactgaattatggtgttacat-cataactccataaattcaatgaaaatcattcaattatgcatttacaatgggtgaatattatgatatataaattgtaccacaataaagctgtgaaaaaaATGAAGATGACATAAAAATTTGTTTCaa------------ac-aaaaaccagatggg----------------------caaaatagaaacctaag i panTro5.chr6 C 0 C 0 s panPan2.chr6 171781436 369 + 173848474 aatgagtcacagaca---catcgtgtagaata-gagagggcagacacagaggcatgcgtattgagtgttttacgtt-catgcaatttctagaa-----aaatctgtggagaaag-aaatcagtatttgggggggctaaga---gactggaggtgaactcagatgaggcatgagggaaatttt-gggggtcatgggaatgttt-aaaactgaattatggtgttacat-cataactccataaattcaatgaaaatcattcaattatgcatttacaatgggtgaatattatgatatataaattgtaccacaataaagctgtgaaaaaaATGAAGATGACATAAAAATTTGTTTCaa------------ac-aaaaaccagatggg----------------------caaaatagaaacctaag i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11463671 370 - 12463322 aatgagtcacaaaca---catcgtgtggaata-gagagggcagacacagaggcatgcgtattgagtgttttacgtt-catgcaatttctagaa-----aaatctgtgcagaaagaaaatcagtatttgggggggctaaga---gactggaggtgaactcagatgaggcatgagggagatttt-gggggtcatgggaatgttt-aaaactgaattatggtgttacat-cataactccataaattcaatgaaaatcattcaattatgcatttacaatgggtgaatattatgatatataaattgtaccacaataaaactgtgaaaaaaATGAAGATGACATAAAAATTTGTTTCaa------------ac-aaaaaccagatggg----------------------caaaatagaaacctaag i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156289814 382 + 157873769 aatgaatcacaaaca---catcgtgtagaata-gagagggcagacacagaggcatgcgtattgagtgttttacgtt-catgcaatttctagaaaaa-caaatctatggagaaagaaaatcagtattttggggggctaaga---ggctggaggtgaactcagatgaggcatgagggaaattgt-gggggtcatgggaatgttt-aaaactgaattatggtgttacat-cataactccataaattcaatgaaaatcattcaattatacgtttacaatgggtgaatattatgatatataaattgcaccacaataaagctgtgaaaaaaATGAAGATGACATAAAAATTTGTTTCGA----ACAAACACAC-AAAAACCAGATGGG----------------------CAAAATAGAAACCTAAG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170317127 386 + 172585720 aatgaatcacaaaca---catcatgtagagta-gagagggcagacacagaggcgtgcgtattgagtgttttgcgtt-catgcaatttctagaaaaa-caaatctgtggagaaagaaaatctgtactttggggggctaaga---gactggaggtgaactcagacgaggcatgagggaaatttt-gggggtcacaggaacgttt-aaaactgaattattgtgttatgtgcataactccataaattcaatgaaaatcattcaattatgcatttacaatgggtgaatattatgatagataaattctaccacaataaagctgtgaaaaaaATGAAGATGACATAAGCA-TTGCTTCaaacaaacaaacaaac-aaaaaccagatggg----------------------caaaatagaaacctaag i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169062693 384 - 170955103 aatgaatcacaaaca---catcatgtagagta-gagagggcag--acagaggcgtgcgtattgagtgttttgcgtt-catgcaatttctagaaaaa-caaatctgtggagaaagaaaatctgtactttggggggctaaga---gactggaggtgaactcagacgaggcatgagggaaatttt-gggggtcacaggaacgttt-aaaactgaattattgtgttatgtgcataactccataaattcaatgaaaatcattcaattgtgcatttacaatgggtgaatattatgatagataaattctaccacaataaagctgtgaaaaaaATGAAGATGACATAAGCA-TTGCTTCaaacaaacaaacaaac-aaaaaccagatggg----------------------caaaatagaaacctaag i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8349252 386 + 10161646 aatgaatcacaaaca---catcatgtagagta-gagagggcagacacagaggcgtgcgtattgagtgttttgcgtt-catgcaatttctagaaaaa-caaatctgtggagaaagaaaatctgtactttggggggctaaga---gactggaggtgaactcagacaaggcatgagggaaatttt-gggggtcacaggaacgttt-aaaactgaattattgtgttatgtgcataactccataaattcaatgaaaatcattcaattatgcatttacaatgggtgaatattatgatagataaattctaccacaataaagctgtgaaaaaaATGAAGATGACATAAGCA-TTGCTTCaaacaaacaaacaaac-aaaaaccagatggg----------------------caaaatagaaacctaag i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1380133 386 + 3144229 aatgaatcacaaaca---catcgtgtaaagtg-gagagggcagacacagaggcgtgcgtatcgagtgttttgcgtt-catgcaatttctagaaaaa-caaatctgtggagaaagaaaatcagtacttt-gggggctaaga---cagtggaggtgaactcagacgaggcataagggaaattttggggggtcacaggaacgttt-aaaactgaattattgtgttacttgcataactccataaattcaatgaaaatcattcaattatgcatttacaatgggtgaatattatgatatataaattctaccacaataaagctgtgaaaaaaATGAAGATGACATAAAAA-TTGTTTCaaacaaacaaacaaac-aaaaaccagatggg----------------------caaaatagaaacctaag i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96658423 386 + 98384682 aatgaatcacaaaca---catcgtgtaaagtg-gagaaggcagacacagaggcgtgcgtatcaagtgttttgagtt-catgcaatttctagaaaaa-caaatctgtggagaaagaaaatctgtactttggggggctaaga---gactggaggtgaactcagacgaggcatgagggaaatttt-gggggtcacaggaacgttt-aaaactgaattattgtgttacgtgcataactccataaattcaatgaaagtcattcaattatgcatttacaatgggtgaatattatgatatataaattctaccacaataaagctgtgaaaaaaATGAAGATGACATAAGCA-TTGTTTCaaacaaacaaacaaac-aaaaaccagatggg----------------------caaaatagaaacctaag i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8203472 385 - 10857215 aatgaatcacaaaca---catcgtgtgaagtg-gagagggcagacacagaggcgtgcgtatcgagtgttttgcgtt-catgcaatttctagaaaaa-caaatctgtggagaaagaaaatcagtacttt-gggggctaaga---gactggaggtgaactcagacgaggcataagggaaatttt-gggggtcacaggaacgttt-aaaactgaattattgtgttacgtgcataactccataaattcaatgaaaatcattcagttatgcatttacaatgggtgaatattatgatatataaattctaccacaataaagctgtgaaaaaaATGAAGATGACATAAAAA-TTGTTTCaaacaaacaaacaaac-aaaaaccagatggg----------------------caaaatagaaacctaag i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15597421 381 - 23502949 aatgaatcacaaaca---catcctgtagagtg-gagagggcagacacagaggcgtgcgtattgagtgttttgcgtt-catgcaatttctagaaaaa-caaatctgtggagaaagaaaatcagtacttt-gggggctaaga---gactggaggtgaactcagatgaggcatgagggaaatttt-tggggtcacgggaatgttt-aaaactgaattatggtgttacatgcataactacataaattcaatgaaaatcattcaattatgcatttacaatgggtgaatattatgatatataaattcaaccacaataaagctgtgaaaaaaAGGAAGATGACATAAAAA-TTGTTT----Caaacaaacaaac-aaaaaccagatgag----------------------caaaatagaaacctaag i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169867089 382 + 171630274 aatgaatcacacaca---catcgtgaagagta-gagagggcagacacagaggtgtgcacattgaatatttgatgtt-catgtaatttctagaaaaa--aaatctgtggagaaagaaaatcagtagtttgggagtctgaga---gactggaggtgaactcagatgaggcatgagggaaatgtt-gggggtcgtgggaatgctg-aaaactgaattgtggtgttacgtggaaaactccataacttcaatggaaatcattcaattatgcatttacaacgggtgaatattatgatatataaattctacctcaacaaagctgtg-aaaaaaTAAAGATGATGTGAAAATTTGTTTCaaacag----acaaacaaaaaaacagatggg----------------------caaaatagaaacccaag i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1280374 382 - 2905041 aatgaat----caca---cattgtgaagagta-gaga-ggcagacacagaggcatgtacattgaatgtttgatgtt-catgcaatttctagaaaaa-cgaatctgtggagaaagaaaatcagtagtttgggagtctgaga---gactggaggtaaactcagaaaaggcatgagggaaatgtt-gggggtcatgggaatgttt-aaaactgaactgtggtgttatgtgggaaactccataaattcaattaaaatcattcaattatgcatttacagtgggtgaatattatgatttataaattctacctcaataaagctgtg-aaaaaaTAAAGATGATGTAAAAATTTGTTTCGAACAGATaaacaaacaaaaaaacagatggg----------------------taaaatagaaacccaag i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1237124 378 - 2164891 aatgaatcacacaca---catcatgaagagta-tagagggcagacacagaggcatgcgcattgaatgtttgatgtt-catgcaatttctagaaaaa-agaatctgtggagaaagaaaatcggtagtttgggagtctgaga---gactggaggtaaactcagatgaggcaggagggaaatgtt-gggggtcatgggaatgttt-aaaactgagttgtggtggtatgtggaaaactccataaagtcaatgaaaatcattcaattgtgcatttacaatgggtgaatattatgatttataaattctacctcaataaagctgtg-aaaaaaTAAAGATGATGTAGAAATTTGTTTCaa--------acaaacaaaaaaacagatggg----------------------t-aaatagaaacccaag i cebCap1.NW_016107695v1 I 911 C 0 s dasNov3.JH569188 546780 406 + 760995 gatgagtcacagacataccactatgaaaagtatttaaaaaaagacccaaaagactgcatattgtgtaatacaatttatatgaaatatctagaaaagtcaagactgtagagactgaaagcatggttgccaggagttggagacggaagtggggatggacttcaaagaaataactgggaaattca-gaggattatgtaagtatttaaaaattggattttgctgatggatctacaactccaaaaatttattaaaaaata-----ttgtacacttaacatgggtggattttatgatatataaatcatacttcaaaaaagttgttaaaaaaacaaaagtgaaaccaattcttttttcag--------acaaac-aaaaactgagggagttttttgcaagcaaatctttatcaaaataaaattttacg i dasNov3.JH569188 C 0 I 145 e otoGar3.GL873575 10940536 699 - 12073884 I e aotNan1.NW_018494782v1 1490184 531 - 1813869 I e canFam3.chr1 56161027 1683 + 122678785 I a score=928440.000000 s hg38.chr6_KB021644v2_alt 91674 121 + 185823 agcaaacgtgtggctttagcctcaaccatgttgatcatcatgttaaatacgaatggtctcaaAGGACCACATACTCTATGGCCC-ATCAGTCTAGACGTCAGGAAAATGCAAGCTCATCTTC s panTro5.chr6 173543233 121 + 175400573 agcaaacgtgtggctttagcctcaaccatgttgatcatcatgttaaatacgaatggtctcaaAGGACCACATACTCTATGGCCC-ATCAGTCTAGACGTCAGGAAAATGCAAGCTCATCTTC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171781805 121 + 173848474 agcaaacgtgtggctttagcctcaaccatgttgatcatcatgttaaatacgaatggtctcaaAGGACCACATACTCTATGGCCC-ATCAGTCTAGACGTCAGGAAAATGCAAGCTCATCTTC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11464041 121 - 12463322 agcaaacgtgtggctttagcctcaaccatgttgatcagcatgttaaatacgaatggtctcaaAGGACCACATACTCTATGGCCC-ATCAGTCTAGACGTCAGGAAAATGCAAGCTCATCTTC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156290196 121 + 157873769 AGCAAACGTGTGGCTTTAGCCTCAACCATGTTGATCATCACGTTAAATACGAATGGGCTCAAAGGAGCACATACTCTATGGCCC-ATCAATCTAGACATCAGGAAAATGCAAGCTCATCTCC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170317513 120 + 172585720 agcaaatgtgtggctttagcctcaaccatattgatcatcatgtt-aatacaaatgggctcaaAAGAGTACATCCTCTATGGCCC-ATCAATATAGACATCAGGAAAATGCAAGCTCATCTCC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169063077 120 - 170955103 agcaaatgtgtggctttagcctcaaccatattgatcatcatgtt-aatacaaataggctcaaAAGAGTACATCCTCTATGGCCC-ATCAATATAGACATCAGGAAAATGCAAGCTCATCTCC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8349638 120 + 10161646 agcaaatgtgtggctttagcctcaaccatattgatcatcatgtt-aatacaaatgggctcaaAAGAGTACATCCTCTATGGCCC-ATCAATATAGACATCAGGAAAATGCAAGCTCATCTCC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1380519 121 + 3144229 agcaaatgtgtgactttagccacaaccatattgatcatcatattaaatacaaatgggctcaaAAGAGTACATACTCTATGGCCC-ATCAATATAGACGTCAGGAAAATGCAAGCTCATCTGC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96658809 121 + 98384682 agcaaatgtgtggctttagcctcaaccatattgatcatcatgttaaatacaaatgggctcaaAAGAGTACATCCTCTATGGCCC-AACAATATAGACGTCAGGAAAATGCAAGCTCATCTCG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8203857 121 - 10857215 agcaaatgtgtgactttagccacaaccatattgatcatcatgttaaatacaaatgggctcaaAAGAGTACATCCTCTATGGCCC-ATCAATATAGACGTCAGGAAAATGCAAGCTCATCTCC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15597802 120 - 23502949 agcaaatgtgtggctttagcctcaaccatattgatcat-atgttaaatacaaatgggctcaaAAGAGTACATACTCTATGGCCC-ATCGATATAGACGTCAGGAAAATGCAAGCTCATCTCC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169867471 122 + 171630274 ggcaaatgtgtggctttgatctcaaccttactgatcatcaggctaaatataaatggtctcgaaacaGTACATACTCTATGGCCCTATCAACACAGAAGTCAGGACGACGAAAGCTGGTCTTC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1280756 121 - 2905041 ggcaaatgtgtgtctttaatctcagccttattgatcatcagg-taaatataaatggcctcaaAAGAGTACATACTCTATGGCCCTATCAACACAGAAGTCAGGAAAGTAAGAGCTGGTCTTC i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1237502 122 - 2164891 ggcaaatgtgtggctttaatctcaaacttatttatcatcaggttaaatataaatggtctcaaAAGAGCACATACTCTATGGCCCTATCAACATAGAAGTCAGGACAATGAGAGCTGGTCTTC i cebCap1.NW_016107695v1 C 0 C 0 e otoGar3.GL873575 10940536 699 - 12073884 I e aotNan1.NW_018494782v1 1490184 531 - 1813869 I e dasNov3.JH569188 547186 145 + 760995 I e canFam3.chr1 56161027 1683 + 122678785 I a score=977517.000000 s hg38.chr6_KB021644v2_alt 91795 144 + 185823 TGTGTCAGTGGTTGCCTGGGGATAGAGGGAGGACAAGG---TAAAAATGAGAGATCACAAA---GGGGCACAGATATATACCTACCGCAAGCCTTTCA-----------------------------AATTGC--ACACAAAAAAATGTGCAACTTATTAA-----ATATTA----T-ACCACAGTAAAGA-- s panTro5.chr6 173543354 135 + 175400573 TGTGTCAGTGGTTGCCTGGGGATAGAGGGAGGAC----------------GAGATCACAAA---GGGGCACAGATATATACCTACCGCAAGCCTTTCA-----------------------------AATTGC--ACACAAAAAAATATGCAACTTATTAA-----ATATTAATTAT-ACCACAGTAAAGA-- i panTro5.chr6 C 0 C 0 s panPan2.chr6 171781926 135 + 173848474 TGTGTCAGTGGTTGCCTGGGGATAGAGGGAGGAC----------------GAGATCACAAA---GGGGCACAGATATATACCTACCGCAAGCCTTTCA-----------------------------AATTGC--ACACAAAAAAATATGCAACTTATTAA-----ATATTAATTAT-ACCACAGTAAAGA-- i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11464162 147 - 12463322 AGTGTCAGTGGTTGCCTGGGGATAGAGGGAGGATGAGG---TAAAAATGAGAGATCACAAA---AGGGcacagatatatacctaccgcaagcctttca-----------------------------aattgc--acac-aaaaaatgtgcaacttgttaa-----atattaattat-accacagtaaaga-- i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156290317 147 + 157873769 AGTGTCAGTGGTTGCCTGGGGATAGAGGGAGGAGGAGG---TAAAAATGAGAGATTGCAAA---GGGGcacaggtatatacctatggcaagcctttca-----------------------------aattgc--acac-aaaaaatgtgcaacttattaa-----atattaattat-tccacagtaaaga-- i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170317633 148 + 172585720 AGTGTCAGTGGTTGCCTGGGGATAGATGGAGGACGAGG---TAAAAATGAGGGATCACAAA---AGGGCACAGATATATACCTACGGCAAGCCTTTCA-----------------------------AATCGT--ACACAAAAAAATGTGCAACTTATTAA-----ACATTAATTAT-ACCACAGTAAAGA-- i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169063197 148 - 170955103 AGTGTCAGTGGTTGCCTGGGGATAGATGGAGGACGAGG---TAAAAATGAGGGATCACAAA---AGGGcacagatatatacctacggcaagcctttca-----------------------------aatcgt--acacaaaaaaatgtgcaacttattaa-----acattaattat-accacagtaaaga-- i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8349758 148 + 10161646 AGTGTCAGTGGTTGCCTGGGGATAGATGGAGGACGAGG---TAAAAATGAGGGATCACAAA---AGGGCACAGATATATACCTACGGCAAGCCTTTCA-----------------------------AATCGT--ACACAAAAAAATGTGCAACTTATTAA-----ACATTAATTAT-ACCACAGTAAAGA-- i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1380640 150 + 3144229 AGTGTCAGTGGTTGCCTGGGGATAGATGGAGGACAAGG---TAAAAATGAGAGCTCACAAA---GGGGCACAGATACATACCTACGGCTAGCCTTTCA-----------------------------AATCGTACACACAAAAAAATGTGCAACTTATTAA-----ATACTAATTAT-ACCACAGTAAAGA-- i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96658930 150 + 98384682 AGTGTCAGTGGTTGACTGGGGATAGATGGAGGACAAGG---TAAAAATGAGAGATCACAAA---GGGGcacagatacatacgtacggcaagcctttca-----------------------------aatcgtacacacacaaaaatgtgcaacttattaa-----atattaattat-accacagtaaaga-- i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8203978 150 - 10857215 AGTGTCAGTGGTTGCCTGGGGATAGATGGAGGACAAGG---TAAAAATGAGAGATCACAAA---GGGGCACAGATACATACCTAGGGCAAGCCTTTCA-----------------------------AATCGTACACACAAAAAAATGTGCAACTTATTAA-----ATACTAATTAT-ACCACAGTAAAGA-- i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15597922 149 - 23502949 AGTGTCAGTGGTTGCCTGGGGATAGATGGAGGACAAGG---TAAAAATGAGAGATCACAAA---GGGGCACAGATATATACCTACAGCAAGCCTTTCA-----------------------------AATCGAACACACA-AAAAATGTGCAACTTATTAA-----ATATTAATTAT-ACCACAGTAAAGA-- i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169867593 141 + 171630274 GGGGTCCGTGGTTGCCT-GGGACGGAGGGAGCAGGAGGAGCTAAACATGAGAGACCATAAA---GCCGCACAGATGTACAGCTGCGGCCAACC-TTCT-----------------------------GCCTGC--ACAC-GGAAGAGCTGCAGCTTATCAG-----GTAT--------ACCATGGCAAAGA-- i calJac3.chr4 C 0 I 344 s saiBol1.JH378287 1280877 147 - 2905041 AGGGTCCGTGGTTGCCT-GGGACAGAAGGAGGAGGAGGGACTAAAAATGAGA-ATCATCAA---GCAGCCCAGATACATAGCTACAGCAAACC-TTCA-----------------------------AACTGC--ACAC-AAAAAATGTGCAACCTAGTAG-----ATATTAACTAC-ACCACAGTAAAGA-- i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1237624 147 - 2164891 AGTGTCCGTGGTTGCCT-AGGACAGAGGGAGGA-GAAGAACTAAAAATGAGAGGTCATAAA---GCAGCACAGATATATAGCTACAGCAAACC-TTCA-----------------------------AACTGC--ACAC-AAAAAATGTGCAACTTATTAA-----ATATTAATTAT-ACCACAGTAAAAG-- i cebCap1.NW_016107695v1 C 0 C 0 s dasNov3.JH569188 547331 187 + 760995 tgcattattggtttcacaatatttgtagaaaaaatgtg---tgacaaaaatagctcaaagaatgagggcatggaaatatag-tattttaagagtctcatcatatatagtataacagcattggaagtgaattgta-atat-gtaaaagttgtatcttgtaaattcccacaacagctatgacaataaaacagagg i dasNov3.JH569188 I 145 C 0 e otoGar3.GL873575 10940536 699 - 12073884 I e aotNan1.NW_018494782v1 1490184 531 - 1813869 I e canFam3.chr1 56161027 1683 + 122678785 I a score=30622.000000 s hg38.chr6_KB021644v2_alt 91939 5 + 185823 TGCAA--- s panTro5.chr6 173543489 5 + 175400573 TGCAA--- i panTro5.chr6 C 0 C 0 s panPan2.chr6 171782061 5 + 173848474 TGCAA--- i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11464309 5 - 12463322 tgcaa--- i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156290464 5 + 157873769 tgcaa--- i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170317781 5 + 172585720 TGCAA--- i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169063345 5 - 170955103 tgcaa--- i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8349906 5 + 10161646 TGCAA--- i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1380790 5 + 3144229 TGCAA--- i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96659080 5 + 98384682 tgcaa--- i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8204128 5 - 10857215 TGCAA--- i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15598071 5 - 23502949 TGCAA--- i colAng1.NW_012114488v1 C 0 C 0 s saiBol1.JH378287 1281024 5 - 2905041 CGCAC--- i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1237771 5 - 2164891 TGCAC--- i cebCap1.NW_016107695v1 C 0 C 0 s dasNov3.JH569188 547518 8 + 760995 tatagcta i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10940536 699 - 12073884 I e aotNan1.NW_018494782v1 1490184 531 - 1813869 I e calJac3.chr4 169867734 344 + 171630274 I e canFam3.chr1 56161027 1683 + 122678785 I a score=775874.000000 s hg38.chr6_KB021644v2_alt 91944 107 + 185823 AAAATGAAATAAAACTTATCAAATTATATGC----------------------------------TTCCAACATATATAGCTTATTTTAT----GTTACAGCTaaatatacatacataataaaaactaaaa----ataaaaTGTGATAA-- s panTro5.chr6 173543494 106 + 175400573 AAAATGAAATAAAGCTTATCAAATTATATGC----------------------------------TTCCAACATATATAGCTTATTTTAT----GTTACAGCTAAATATACATACATAATAAAAACTAAAA-----CAAAATGTAATAA-- i panTro5.chr6 C 0 C 0 s panPan2.chr6 171782066 106 + 173848474 AAAATGAAATAAAGCTTATCAAATTATATAC----------------------------------TTCCAACATATATAGCTTATTTTAT----GTTACAGCTAAATATACATACATAATAAAAACTAAAA-----CAAAATGTGATAA-- i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11464314 111 - 12463322 aaaaTGAAATAAAGCTTATCAAATTATATGC----------------------------------TTCCAACATATATAGCTTATTTTAT----GTTACAGCTAAATATACATACATAATAAAAACTAAAAATAAACAAAATGTGATAA-- i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156290469 115 + 157873769 aaaaTGAAATAAAACTTATCAAATTATATGC----------------------------------TTCAAACGTATATAGCTTATTTTATGTTAGTTACAGCTaaatatatatacataataaaaactaaaaataaaCAAAATGTGATAA-- i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170317786 112 + 172585720 AAAATGAAGTAAAGCTTATCAAATTATATGC----------------------------------TTCCAAC--ATATAGCTTATTTTATGTTAGTTACAGCTAAATATACATGTATAATAAAAATTAAAAATAAAC-AAAGGTGATAA-- i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169063350 112 - 170955103 aaaaTGAAGTAAAGCTTATCAAATTATATGC----------------------------------TTCCAAC--ATATAGCTTATTTTATGTTAGTTACAGCTAAATATACATGTATAATAAAAATTTAAAATAAAC-AAAGGTGATAA-- i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8349911 112 + 10161646 AAAATGAAGTAAAGCTTATCAAATTATATGC----------------------------------TTCCAAC--ATATAGCTTATTTTATGTTAGTTACAGCTAAATATACATGTATAATAAAAATTAAAAATAAAC-AAAGGTGATAA-- i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1380795 114 + 3144229 AAACTGAAGTAAACCTTATCAAATTATATGC----------------------------------TTCCAACATATATAGCTTATTTTATGTTAGTTACAGCTAAATATACATGTATAATAAAAATTAAAAATAAAC-GAATGTGATAA-- i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96659085 114 + 98384682 aaaCTGAAGTAAAGCTTATCAAATTATATGC----------------------------------TTCCAACATATATAGCTTATTTTATGTTAGTTACAGCTAAATATACATGTATAATAAAAATTAAAAATAAAC-AAAGGTGATAA-- i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8204133 114 - 10857215 AAACTGAAGTAAAGCTTATCAAATTATATGC----------------------------------TTCCAACATATATAGCTTATTTTATGTTAGTTACAGCTAAATATACATGTATAATAAAAATTAAAAATAAAC-GAATGTGATAA-- i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15598076 114 - 23502949 AAAATGAAGTAAAGCTTATGAAATTATATGC----------------------------------TTCCAACATATATAGCTTATTTTATGTTAGTTACAGCTAAATATACATGTATAATAAAAATTAAAAATAAAC-AAATGTGATAA-- i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169868078 115 + 171630274 AAAATGAAATAACGCTTATCAAATCGTATGC----------------------------------TTCAAGAGTGTGTCGTTTATTTTATGTTAGTTGTAGCTAAAGCTATACATATAATAAAAAGTAAAAAGAAACAAAACATAATAA-- i calJac3.chr4 I 344 C 0 s saiBol1.JH378287 1281029 110 - 2905041 AAAGTGAAATAAAGCTCGTCCAATTGTATGC----------------------------------TTCAAAAGTATGTAG-----TTTATGTTAGTTATAGCTAAAGCTATACATATAATAAAAATTAAAAAGAAACAAAACATAATAA-- i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1237776 149 - 2164891 AAAATGAAATAAAGCTTATCAAATTGTATGCTTCAAAATGAAATTAAGCTTATCAAATTGTATGTTTCAAAAGTATGTAGTTTATATTATGTTAGTTATAGCtaaagctatacatataataaaaattaaaaagaaacaaaacataaTAA-- i cebCap1.NW_016107695v1 C 0 C 0 s dasNov3.JH569188 547526 99 + 760995 ataagcaaataaagaggataaaattgaatcc----------------------------------t---aaaaaata---cttattcaatg-----------caaaaatgcagaaaaaagggaaaaagaacaaagaa-aaacgtgggaaaa i dasNov3.JH569188 C 0 I 504 e otoGar3.GL873575 10940536 699 - 12073884 I e aotNan1.NW_018494782v1 1490184 531 - 1813869 I e canFam3.chr1 56161027 1683 + 122678785 I a score=2450037.000000 s hg38.chr6_KB021644v2_alt 92051 326 + 185823 GATCCCTAAAGACTTGCTCTGTGAGCTTAAAAATTCCATTACATCCATAttt-----tttttt-atttttattttttgagacagagtctcactctgtcacccaggctggagtgcagtggcacaatctaggctcactgcaacttctgcctcccaggttcacgctattctcctgtcacagcctcccgagtagctgggattacaggcatgtgccaccatgcctggctaatttttgtatttttagtagagatggggttttaacac----attggccaggctggtcaggctggtcttgaactcctgacctcaggtgatcctcctgccttggcctcccgaag s panTro5.chr6 173543600 327 + 175400573 GATCCCTAAAGACTTGCTCTGTGAGCTTAAAAATTCTATTACATCCATAttt-----tttttttatttttattttttgagacagagtctcactctgtcacccaggctggagtgcagtggcacaatctaggctcactgcaacttctgcctcccaggttcacactattctcctgtcacagcctcccgagtagctgggattacaggcatgcgccaccatgcctggctaatttttgtatttttagtagagatggggttttaacac----attggccaggctggtcaggctggtcttgaactcctgacctcaggtgatcctcccgccttggcctcccgaag i panTro5.chr6 C 0 C 0 s panPan2.chr6 171782172 327 + 173848474 GATCCCTAAAGACTTGCTCTGTGAGCTTAAAAATTCCATTACATCCATAttt-----tttttttatttttattttttgagacagagtctcactctgtcacccaggctggagtgcagtggcacaatctaggctcactgcaacttctgcctcccaggttcacactattctcctgtcacagcctcccgagtagctgggattacaggcatgcgccaccatacctggctaatttttgtatttttagtagagatggggttttaacac----attggccaggctggtcaggctggtcttgaactcctgacctcaggtgatcctcccgccttggcctcccgaag i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11464425 327 - 12463322 GATCCCTAAAGACTTGCTCTGTGAGCTTAAAAATTCCATTACATCCAttttt-----tttttttatttttattttttgagacagagtctcactctgtcacccaagctggagtgcagtggcacaatctaggctcactgcaacttctgcctcccaggttcacgctattttcctgtcacagcctcccgaatagctgggattacaggcatgcgccaccatgcctggctaatttttgtatttttagtagagatggggttttaacac----attggccaggctggtcaggctggtcttgaactcctgacctcaggtgatcctcccgccttggcctcctgaag i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156290584 336 + 157873769 GATCCCTAAGGACTTGCTCTGTGAGCTTAAACATTCCATTACATCCATAtttatttatttttttatttttattttttgagatggagtctcactctgtcacccaggctggagtgcagtggcacaatctaggctcactgcaacttctgcctcccaggttcaagctgttctcctgtcacagccccccgagtagctgggattacaggcatgcgccaccatgcctggctaatttttgtatttttagtagagatggggttttaacacattgattggccaggctggtcaggctggtcttgaactcctgacctcaggtgatcctcccgccttggcctcccaaag i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170317898 319 + 172585720 GATCCCTAAGGACTTGCTCTGTGAGGTTAAAGATTCGATGACATCTAttttt----atttatttatttttattttttgagatggagtctcactctctcgcccaggctggagtgcagtggcacgatctaggctcattgcaaccttcacctgccagattcaagctattcttctgtcacagccccccaagtatctgggatcataggcatgcaccaccatgtccagctaatttttgtattttcagcagagacagggtttcagcac----attggc---------caagctggtcttgaactcctgacctcaggtgatcctcccgccttggcatcccaaag i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169063462 319 - 170955103 GATCCCTAAGGACTTGCTCTGTGAGGTTAAAGATTCGATGACATCTAttttt----atttatttatttttattttttgagatggagtctcactctctcgcccaggctggagtgcagtggcacgatctaggctcattgcaaccttcacctgccagattcaagctattcttctgtcacagccccccaagtatctgggatcataggcatgcaccaccatgtccagctaatttttgtattttcagcagagacagggtttcagcac----attggc---------caagctggtcttgaactcctgacctcaggtgatcctcccgccttggcatcccaaag i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8350023 319 + 10161646 GATCCCTAAGGACTTGCTCTGTGAGGTTAAAGATTCGATGACATCTAttttt----atttatttatttttattttttgagatggagtctcactctctcgcccaggctggagtgcagtggcacgatctaggctcattgcaaccttcacctgccagattcaagctattcttctgtcacagccccccaagtatctgggatcataggcacgcaccaccatgtccagctaatttttgtattttcagcagagacagggtttcagcac----attggc---------caagctggtcttgaactcctgacctcaggtgatcctcccgccttggcatcccaaag i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1380909 318 + 3144229 GAACCCTAAGGACTTGCTCTGTGAGGTTAAAGATTCGATTACATCTAttttt----atttatttatttttattttttgagatagaatctcactctctcacccaggctggagtgcagtggcacgatctaggctcattgcaaccttcgcctgccagattcaagctattcttctgtcacagcctcccaagtatctgggatcataggcatgcaccaccatgtccagctaatttttgtatttttagcagagaca-ggtttcagcac----attggc---------caagctggtcttgaactcctgacctcaggtgatccacctgacttggcatcccaaag i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96659199 319 + 98384682 GATCCCTAAGGACTTGCTCTGTGAGGTTAAAGATTCGATGACATCTAttttt----atttatttatttttattttttgagatggagtctcactctctcgcccaggctggagtgcagtggcacgatcgaggctcattgcaaccttcacctgccagattcaagctattcttctgtcacagcctcccgagtatctgggatcataggcatgcaccaccacgtccagctaatttttgtattttcagtagagacaggatttcagcac----attggc---------caaactggttttgaactcctgacctcaggtgatcctcccgccttggcatcccaaag i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8204247 313 - 10857215 GATCCCTAAGGACTTGCTCTGTGAGGTTAAAGATTCGATTACATCTAttttt----atttatttatttttattttttgagatggaatctcactttctcacccaggctggagtgcagtgtcacgatctaggctcattg------tcacctgccagattcaagctattcttctgtcacagcctcccaagtatctgggatcataggcatgcaccaccatgtccagctaatttttgtatttttagcagagacagggtttcagcac----attggc---------caagctggtcttgaactcctgacctcaggtgatccacctgacttggcatcccaaag i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15598190 319 - 23502949 GATCCCTAAGGACTTGCTCTGTGAGGTTAAAGATTCGATTACATCTAttttt----atttatttatttttattttttgagatgaagtctcactctctcgcccaggctggagtgcagtggcacgatctaggctcattgcaaccttcagctgccagattcaagctattcttctgtcacagcctcccgagtatctgggatcataggcatgcaccaccatgtccagctaatttttgtattttcagtagagacagggtttcagcac----attggc---------caagctggtcttgaactcctgacctcaggtgatcctcccgtcttggcatcccaaag i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169868193 317 + 171630274 GATCCCTAAGGACTTGCTCTGTGAGCTCAAAGATTCATTTGCATCTGttttt----atttatttgtttttactttttgagacagagtctcactctgtcacccaggccagcatgcagtggcgtgatctaggctcactgcaacgtctgcctcctgggttcaagtgattctcctgcctcagcctcctgagaagcttggattacaggcactcaacaccatacccagctaatttttgcatttctagtagagaaggcatttcactat----gttggc---------caggatggtcttgatcttttgacctt--gtgatccacccacctcggtctcccaaag i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1281139 317 - 2905041 GATCCCTAAGGACTTGCTCTGTGAGCCTAAAGATTCATTTACATCTAttttt----atttatttgtttttattttttgagacggagtctcactctgtcacccaggccagcatgcagtggcatgatctaggctcactgcaacctctgcctcctgggttcaagtgattctcctttctcagcctcctgagaagctcggattacaggcactcaacaccatacccagctaatttttgcatttttagtagagaaggcatttcgctat----gttggc---------caggatggtcttgatcattggacctt--gtgatccgcccacctcggcctcccaagg i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1237925 315 - 2164891 GATCCCTAAGGACTTGCTCGGTGAGCTTAAAGATTCATTTACATCTAttttt----atttatttgtttttattttttgagatggagtctca--ctgtcatccaggccagcatgcagtggcgtgatctaggcccactgcaacctctgcctcctgagttcaagtgattctcttgtctcagcctcctgagaaactcggattacaggcactcaacagcatatccagctaatttttgcatttttagtagagagggcatttcactat----gttggc---------caggatggtcttgaacttttgacctt--gtgatccgcccacctcggcctcccaaag i cebCap1.NW_016107695v1 C 0 C 0 e otoGar3.GL873575 10940536 699 - 12073884 I e aotNan1.NW_018494782v1 1490184 531 - 1813869 I e dasNov3.JH569188 547625 504 + 760995 I e canFam3.chr1 56161027 1683 + 122678785 I a score=355854.000000 s hg38.chr6_KB021644v2_alt 92377 39 + 185823 tgctgggattacaggcatgcgccaccacgcccggccTTC s panTro5.chr6 173543927 39 + 175400573 tgctgggattacaggcatgcgccaccacgcccagccTTC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171782499 39 + 173848474 tgctgggattacaggcatgtgccaccacgcccggccTTC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11464752 39 - 12463322 tgctgggattacaggcatgcgccaccacgcccggccTTC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156290920 39 + 157873769 tgctgggattacaggcatgagccaccatgcctggccTTC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170318217 39 + 172585720 tactgggattacaggcatgagccaccatgcccagccTAC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169063781 39 - 170955103 tactgggattacaggcatgagccaccatgcccagccTAC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8350342 39 + 10161646 tactgggattacaggcatgagccaccatgcccagccTAC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1381227 39 + 3144229 tgctgggattacaggcatgagccaccatgcccagccTAC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96659518 39 + 98384682 tgctgggattacaggcatgagccaccatgcccagccTAC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8204560 39 - 10857215 tgctgggattacaggcatgagccaccatgcccagccTAC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15598509 39 - 23502949 tgctgggattacaggcatgagccaccatgcccagccTGC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169868510 39 + 171630274 tgctgggattacaggcatcagccaccgtgcccagccCAC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1281456 38 - 2905041 cgctgggatcacagatgtgagccacggcgcccgg-ccGG i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1238240 39 - 2164891 tgctgggactacaggcgggagccaccgcgcccggccCAC i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1490715 39 - 1813869 tgctgggattacaggcgtgagccaccgcgcctggcccac i aotNan1.NW_018494782v1 I 531 C 0 e otoGar3.GL873575 10940536 699 - 12073884 I e dasNov3.JH569188 547625 504 + 760995 I e canFam3.chr1 56161027 1683 + 122678785 I a score=869197.000000 s hg38.chr6_KB021644v2_alt 92416 96 + 185823 ATTTA--T-TTTTTGTATTCCC-TCAGAATCCTGCATGCTGAATATGTATTTAAAAGA--TTTTAAaaatgttattgttttaaacaatcca-tttaaaaaa-aa s panTro5.chr6 173543966 97 + 175400573 ATTTA--T-TTTTTGTATTCCCCTCAGAATCCTGCATGCTGAATATGTATTTAAAAGA--TTTTTAaaatgttattgttttaaacaatcca-tttaaaaaa-aa i panTro5.chr6 C 0 C 0 s panPan2.chr6 171782538 97 + 173848474 ATTTA--T-TTTTTGTATTCCCCTCAGAATCCTGCATGCTGAATATGTATTTAAAAGA--TTTTTAaaatgttattgttttaaacaatcca-tttaaaaaa-aa i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11464791 94 - 12463322 ATTTA--T-TTTTTGTATTCCC-TCAGAATCCTGCATGCTGAATATGTATTTAAAAGA--TTTTAAaaatgttattgttttaaacaatcca-ttt--taaa-aa i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156290959 96 + 157873769 ATTTA--T-TTTTTGTATTCCCCTCAGAATCCTGCATGCTGAGTATGTGTTTAAAAGA--TTTAAAaaatgttaatgttttaaacaatcca-ttt-taaaa-aa i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170318256 99 + 172585720 ATTTA--TATTTTTGTACTCCTCTTAGAATCCTGCATGCTGAGTATGTGTTTAAAAGA--TTTAAAaaatgttaatgttttaaacaatcca-tttaaaaggcaa i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169063820 99 - 170955103 ATTTA--TATTTTTGTACTCCTCTTAGAATCCTGCATGCTGAGTATGTGTTTAAAAGA--TTTAAAaaatgttaatgttttaaacaatcca-tttaaaaggcaa i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8350381 99 + 10161646 ATTTA--TATTTTTGTACTCCTCTTAGAATCCTGCATGCTGAGTATGTGTTTAAAATA--TTTAAAaaatgttaatgttttaaacaatcca-tttaaaaggcaa i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1381266 99 + 3144229 ATTTA--TATTTTTGTACTCTTCTTAGAATCCTGCATGCTGAGTATGTGCTTAAAAGA--TTTAAAaaatgttaatgttttaaacgatcca-tttaaaaggcaa i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96659557 100 + 98384682 ATTTA--TGTTTTTGTACTCCTCTTAGAATCCTGCATGCTGAGTATGTGGTTAAAAGA--TTTTAAaaatgttaacgttttaaatgatccattttaaaaggcaa i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8204599 99 - 10857215 ATTTA--TATTTTTGTACTCTTCTTAGAATCCTGCATGCTGAGTATGTGCTTAAGATA--TTTAAAaaatgttaatgttttaaacgatcca-tttaaaaggcaa i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15598548 99 - 23502949 ATTTA--TATTTTTGTACTCCTCTTAGAATCCTGCATGCTGAGTGTATATTTAAAAGA--TTTAAAaaatgttaatgttttaaaagatcca-tttaaaaggcaa i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169868549 98 + 171630274 ATTTA--T-TTTTTGTACTTTCCTTAGAATCCTGCATGCTGAGTATGTGTTTAAAAGA--CTTAAAAAATGTTAACGTTTTAAAGAATACA-TTTAAAAGACAA i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1281494 95 - 2905041 GTTTA------TTTGTACTCCCCTTAGAGTCCTGCATGCTGAGTATGTGTTTAAAAGG--TTTAAAaaatgtcaatgttttaaaaaataca-tttaaaagacaa i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1238279 100 - 2164891 ATTTTTTT-TTTTTGCACTCCCCTTAGAATGCTACATGCTGAGTATGTGTTTAAAAGA--TTTAAAaaatgttaacgttttaaagaataca-tttaaaagacaa i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1490754 98 - 1813869 attta--t-tttttgtaCTCCCCTTAGAATCCTGCATGCTGAGTATGTGTTTAAAAGA--TTTAAAaaatgttaacgttttaaagaataca-tttaaaagacaa i aotNan1.NW_018494782v1 C 0 C 0 s dasNov3.JH569188 548129 96 + 760995 ATTTA----TTTTTGTATTCCCCTTAGCATACCGTGTACTCAGAACATGTTTACAGGATTTTTAAAaaatgttaattatgtaa---attaa-attaaaagacaa i dasNov3.JH569188 I 504 C 0 e otoGar3.GL873575 10940536 699 - 12073884 I e canFam3.chr1 56161027 1683 + 122678785 I a score=1351698.000000 s hg38.chr6_KB021644v2_alt 92512 168 + 185823 agattgtcagactggataaaataacaggactgaaatatatgctgcctaca---------------------------------------------------------------agaaaca------aactataaatata------ggtgaaacgtaaaataaaagaa-aaaagctactcaggcaaacatcagacat-aaaatgcagatgtgttaacgtga-gaca-agtagacctGGGGTTTTCAGG s panTro5.chr6 173544063 168 + 175400573 agattgtcagactggataaaataacaggactgaaatatatgctgcctaca---------------------------------------------------------------agaaaca------aactataaatata------ggtgaaacgtaaaataaaagga-aaaagctactcaggcaaacatcagacat-aaaatgcagatgtgttaacgtga-gaca-agtagacctGGGGTTTTCAGG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171782635 168 + 173848474 agattgtcagactggataaaataacaggactgaaatatatgctgcctaca---------------------------------------------------------------agaaaca------aactataaatata------ggtgaaacgtaaaataaaagaa-aaaagctactcaggcaaacatcagacat-aaaatgcagatgtgttaacgtga-gaca-agtagacctGGGGTTTTCAGG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11464885 168 - 12463322 agattgtcagactggataaaataacaggactgaaatatatgctgcctaca---------------------------------------------------------------agaaaca------aactataaatata------ggtgaaacgtaaaataaaagaa-aaaagctactcaggcaaacatcagacat-aaaatgcagatgtgttaacgtga-gaca-agtagacctGGGGTTTTCAGG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156291055 169 + 157873769 agattgtccgactggataaaataacaggactgaaatatatgctgcctaca---------------------------------------------------------------agaaacaaactataactataaatata------ggtga-----aaagtaaaagaa-aaaagctactcaggccaacatcagacat-aaaatgcagatgtgttaacgtga-gaca-agtagacctGGGGTTTTCAGG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170318355 232 + 172585720 aggttgtcagactggataaaataacaggactgaaatatatgctgcctacaagaaacaaaccataactacaaatacagatacataact------acaaatacagatacaaatacagaaacaaaccataactacaaATACA-------GTGAAAAGTGAAATAAAAGAAGAAAAGCTACTCAGGCAAACATCAGACACAAAAATGCAGATGTGTTAGCGTGA-GACA-AGGAGACCTGGGGTTTCCAGG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169063919 232 - 170955103 aggttgtcagactggataaaataacaggactgaaatatatgctgcctacaagaaacaaaccataactacaaatacagatacataact------acaaatacagatacaaatacagaaacaaaccataactacaaataca-------GTGAAAAGTGAAATAAAAGAAGAAAAGCTACTCAGGCAAACATCAGACACAAAAATGCAGATGTGTTAGCGTGA-GACA-AGGAGACCTGGGGTTTCCAGG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8350480 232 + 10161646 aggttgtcagactggataaaataacaggactgaaatatatgctgcctacaagaaacaaaccataactacaaatacagatacataact------acaaatacagatacaaatacagaaacaaaccataactacaaATACA-------GTGAAAAGTGAAATAAAAGAAGAAAAGCTACTCAGGCAAACATCAGACACAAAAATGCAGATGTGTTAGCGTGA-GACA-AGGAGACCTGGGGTTTCCAGG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1381365 175 + 3144229 tggttgtcagactggataaaataacaggactgaaatatatgctgcctaca---------------------------------------------------------------agaaacaaaccataactacaaataca-------gtgaaaagtgaaataaaagaagaaaagctactcaggcaaacatcagacacaaaaatgcagatgtGTTAGCGTGA-GACA-AGGAGACCTGGGGTTTCCAGG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96659657 232 + 98384682 aggttgtcagactggataaaataacaggactgaaatatatgctgcctacaagaaacaaaccataactataaatacagatac------ataactacaaatacagatacaaatacagaaacaagccataactacaaataca-------gTGAAAAGTGAAATAAAAGAAGAAAAGCTACTCAGGCAAACATCAGACACAAAAATGCAGATGTGTTAGCATGA-GACA-AGTAGACCTGGGGTTTCCAGG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8204698 175 - 10857215 tggttgtcagactggataaaataacaggactgaaatatatgctgcctacaagaaacaga---------------------------------------------------------------ccataactacaaataca-------gtgaaaagtgaaataaaagaagaaaagctactcaggcaaacatcagacacaaaaatgcagatgtGTTAGCGTGA-GACA-AGGAGACCTGGGGTTTCCAGG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15598647 180 - 23502949 aggttgtcagactggataaaataacaggactgacatatatgctgcctaca---------------------------------------------------------------agaaacaaaccataactacaaataca--gataggtgaaaagtgaaataaaagaagaaaggctactcaggcaaacatcagacacaaaaatgcagatgtgttagcgtga-gaca-agtagacctGGGGTTTCCAGG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169868647 123 + 171630274 AGACTGTCAGACTG--------------------------------------------------------------------------------------------------------CAAACTA------TAAATATA--GATGGGTGAAAAGTTAAATAAATT-------GCTGCTCGGGCAAACATCGGACATAAAACTGCAGAC-TGTTATGGTGA-GGCG-AGCAG-CCTGGGGCTCTAA-G i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1281589 176 - 2905041 agactgtcagactggataaaataacaggactaaaatgtatgctgcctaca---------------------------------------------------------------ataaacaaactataaatttaaatata--gataggtgaaaagtaaaataaagca--aagagctactcaggcaaacatcagacataaaaatgcaggc-tgttaatgtga-ggcg-agcag-cctGGGGCTCTAAGG i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1238379 176 - 2164891 agactgtcagactggataaaataacaggactgaaatatatgctgcctaca---------------------------------------------------------------ataaacaaactataaatttaaatata--gataggtgaaaagtaaaataaaaca--aaaagctactcaggcaaacatcagacataaaaatgcagac-tgttaatgtga-ggcg-agcag-cctGGGGCTCTAAGG i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1490852 176 - 1813869 agactgtcagactagataaaataatgggactgaaatatatgctgcctaaa---------------------------------------------------------------ataaacaaactataaatttaaatata--gataggtgaaaagtaaaataaaaca--aagagctactcaggcaaacatcagacataaaaatgcagac-tgttaatgtga-ggcg-agcag-cctGGGGCTCTAAGG i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10941235 168 - 12073884 agagtatcagattga--tgaataataagac--aattgtgtactgcctatg---------------------------------------------------------------agaacccagctcttaatataaatgtatagataggtgaaga-taaaataacagaaaaaCTGCTGCTCAGGCCAACATCAGGCATAAGAAGGT-GACCCTATAACCTGA-GACAGAGGAGACTT---------AAA i otoGar3.GL873575 I 699 C 0 s dasNov3.JH569188 548225 168 + 760995 agattgccagattggataaaatagcaagagtccgctatgtgct-cctaca---------------------------------------------------------------acaaatccacttaaaatataaagaca-----cagataggattaaaataataggaaaaaagat----agacaaatgccaggcag-----tgtagttatattaatgtgatggaa-agtagacATAATGGTTTAAGG i dasNov3.JH569188 C 0 I 41 e canFam3.chr1 56161027 1683 + 122678785 I a score=414247.000000 s hg38.chr6_KB021644v2_alt 92680 49 + 185823 GCTTTGAGGTGC------GAGGACAGCGTTATGTTAGTGGTGGAGTTCCTGTCCT s panTro5.chr6 173544231 49 + 175400573 GCTTTGAGGTGC------GAGGACAGCGTTATGTCAGTGGTGGAGTTCCTGTCCT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171782803 49 + 173848474 GCTTTGAGGTGC------GAGGACAGCGTTATGTCAGTGGTGGAGTTCCTGTCCT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11465053 49 - 12463322 GCTTTGAGGTGC------GAGGACAGCGTTATGTTAGTGGTGGAGTTCCTGTCCT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156291224 49 + 157873769 GCTTTGAGGTGT------GAGGACAGCATTATGCTAGTGGTGGAGTTTCTGTCCT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170318587 55 + 172585720 GCTTTGAGGTGTGAGGAAGAGGATGGCCTTATGCTGGTGGTGGATTTTCTGTCCT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169064151 55 - 170955103 GCTTTGAGGTGTGAGGAAGAGGATGGCCTTATGCTGGTGGTGGATTTTCTGTCCT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8350712 55 + 10161646 GCTTTGAGGTGTGAGGAGGAGGATGGCCTTATGCTGGTGGTGGATTTTCTGTCCT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1381540 55 + 3144229 GCTTTGAGGTGTGAGGAAGAGGACAGCTTTATGCTAGTGGTGGATTTGCTGTCCT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96659889 55 + 98384682 GCTTTGAGGTGTGAGGAAGAGGACAGCCTTATGCTAGTGGTAGATTTTCTGTCCT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8204873 55 - 10857215 GCTTTGAGGTGTGAGGAAGAGGACAGCCTTATGCTAGTGGTGGATTTGCTGTCCT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15598827 55 - 23502949 GCTTTGAGGTGTGAGGAAGAGGACAGCCTTATGCTAGTGGTGGATTTTCTGTCCT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169868770 55 + 171630274 GTCTCGAGGTGTCAGGAGGAGGACCGCCTTGTGCCCCTGGTGGAGCTGCTGTCCT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1281765 54 - 2905041 GCCTTGAGGTGTCAGGAGGAGGAAGGCC-TATGCTCCTGGTGGGGCTGCTGTCCT i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1238555 55 - 2164891 GCCTTGAGGTGTCAGGAGGAGGATGGCCTTATGCTCCTGGTGGAGCTGCTGTCCT i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1491028 54 - 1813869 GCCTTGAGGTGTCAGGAGGAGGA-GGCCTTATGCTCCTGGCGGAGTTGCTGTCCT i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10941403 52 - 12073884 GGTTTAAGGTGTGAGGATAAGGGACACCTCTGGCCATGTGTGGGGACACCAC--- i otoGar3.GL873575 C 0 C 0 e dasNov3.JH569188 548393 41 + 760995 I e canFam3.chr1 56161027 1683 + 122678785 I a score=551258.000000 s hg38.chr6_KB021644v2_alt 92729 71 + 185823 AACAGG-------AGTGCAGTAAGGCCTCCTTTAAGCAGAGACTGCAGAATGAAGGAAGGCTGA--------------------------GCA-ATCTC---GTGGCC s panTro5.chr6 173544280 71 + 175400573 AACAGG-------AGTGCAGTAAGGCCTCCTTTAAGCAGAGACTGCAGAATGAAGGAAGGCTGA--------------------------GCA-ATCTC---GTGGCC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171782852 71 + 173848474 AACAGG-------AGTGCAGTAAGGCCTCCTTTAAGCAGAGACTGCAGAATGAAGGAAGGCTGA--------------------------GCA-ATCTC---GTGGCC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11465102 71 - 12463322 AACAGG-------AGTGCAGTAAGGCCTCCTTTAAGCAGAGACTGCAGAATGAAGGAAGGCTGA--------------------------GCA-ATCTC---GTGGCC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156291273 71 + 157873769 AACAGG-------AGTGCAGTAAGGCCTCCTGTAAGCAGAGACTGCAGAATGAAGGAAGGCTGA--------------------------GCA-GTCTC---GTGGCC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170318642 62 + 172585720 AACAGG-------AGTGCAATAAGGCCTCTTTCAATCAGAGGCTGCAGAATGAAGGAAGACTGA--------------------------GCA-AT------------ i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169064206 62 - 170955103 AACAGG-------AGTGCAATAAGGCCTCTTTCAATCAGAGGCTGCAGAATGAAGGAAGACTGA--------------------------GCA-AC------------ i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8350767 62 + 10161646 AACAGG-------AGTGCAATAAGGCCTCTTTCAATCAGAGGCTGCAGAATGAAGGAAGACTGA--------------------------GCA-AT------------ i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1381595 71 + 3144229 AACAGG-------AGTGCAGTAAGGCCTCTTTCAAGCAGAGGCTGCAGAATGAAGGAAGACTGA--------------------------GCA-ATCTC---GTGGCC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96659944 62 + 98384682 AACAGG-------AGTGCAATAAGGCCTCTTTCAATCAGAGGCTGCAGAATGAAGGAAGACTGA--------------------------GCA-AT------------ i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8204928 71 - 10857215 CACAGG-------AGTGCAGTAAGGCCTCGTTCAAGCAGAGGCTGCAGAATGAAGGAAGACTGA--------------------------GCA-ATCTC---GTGGCC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15598882 62 - 23502949 AACAGG-------AGTGCAATAAGGCCTCTTTCAAGCAGAGGCTGCAGAATGAAGGATGACTGA--------------------------GCA-AT------------ i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169868825 71 + 171630274 AACAGG-------AGCGTGGTAAAGTCTCCTATAAGCAAAGGTTGCAGATTGGAGGAAGACAGA--------------------------GCA-ACGTC---ATGGCC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1281819 71 - 2905041 CACGGG-------AGCGCAGTGAAGTCTCCTTTAAGCTAAGGCTGCAGATGGAAGGAAGACTGA--------------------------GCA-ATATC---ACGGCC i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1238610 71 - 2164891 GACAGG-------GGTGCAGTAAAGTCTCCTTTAAGCAAAGGCTGCAGATTGAAGGAAGACTGA--------------------------GCA-ATATC---ACAGCC i cebCap1.NW_016107695v1 C 0 I 10 s aotNan1.NW_018494782v1 1491082 71 - 1813869 AACAGC-------AGCGCAGTGAAGTCTCCTTTAAGCAAAGGCTGCAGATTGAAGGAAGACTGA--------------------------GCA-ATATC---ACAGCC i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10941455 72 - 12073884 -GTAGA-------AGTG-AGCGGTATCCGCTCTGAGCAGAGGATGAAGGGGGAGAGAGAGCTGA--------------------------GGA-ACCCCCGTGTAGCT i otoGar3.GL873575 C 0 I 11 s dasNov3.JH569188 548434 96 + 760995 AACAAGATGCCCAAGTGAGATGAAGATCCTTCTGAACTTCGGATGAAGAATTAATGAAGACAGAAGCAGGAGAGGGTACGTGCTGAAACTGCAGAT------------ i dasNov3.JH569188 I 41 C 0 e canFam3.chr1 56161027 1683 + 122678785 I a score=9403.000000 s hg38.chr6_KB021644v2_alt 92800 7 + 185823 CTGTGGC s panTro5.chr6 173544351 7 + 175400573 CTGTGGC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171782923 7 + 173848474 CTGTGGC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11465173 7 - 12463322 CTGTGGC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156291344 7 + 157873769 CTGTGGC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170318704 1 + 172585720 ------C i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169064268 1 - 170955103 ------C i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8350829 1 + 10161646 ------C i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1381666 7 + 3144229 CTGTGGC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96660006 1 + 98384682 ------C i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8204999 7 - 10857215 CTGTGGC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15598944 1 - 23502949 ------C i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169868896 5 + 171630274 --TGAGC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1281890 5 - 2905041 --GGAGC i saiBol1.JH378287 C 0 C 0 s aotNan1.NW_018494782v1 1491153 5 - 1813869 --TGAGC i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10941538 7 - 12073884 CTGCGGC i otoGar3.GL873575 I 11 C 0 s dasNov3.JH569188 548530 7 + 760995 TTACTGC i dasNov3.JH569188 C 0 C 0 e cebCap1.NW_016107695v1 1238681 10 - 2164891 I e canFam3.chr1 56161027 1683 + 122678785 I a score=955743.000000 s hg38.chr6_KB021644v2_alt 92807 107 + 185823 TCTTGTCC--TGCACTGGTAGCTGCTCCAGAGGGCC-CGTGAAGTTCCTGCCCCACCATGCATC-TTCTGCACATT--------GGTGCACGA--------------TGCGGAAGGGTTTCAGTGCACTTGGA s panTro5.chr6 173544358 115 + 175400573 TCTTGTCC--TGCACCGGTAGCTGCTCCAGAGGGCC-CGTGAAGTTCCTGCCCCACCATGCATC-TTCTGCACATCTGCACATCGGTGCTCGA--------------TGCGGAAGGGTGTCAGTGCACTTGGA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171782930 115 + 173848474 TCTTGTCC--TGCACTGGTAGCTGCTCCAGAGGGCC-CGTGAAGTTCCTGCCCCACCATGCATC-TTCTGCACATCTGCACATCGGTGCTCGA--------------TGCGGAAGGGTGTCAGTGCACTTGGA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11465180 107 - 12463322 TCTTGTCC--TGCACCGGTAGCTGCTCCAGAGGGCC-CGTGAAGTTCCTGCCCCACCATGCATC-TTCTGCACATT--------GGTGCTCGA--------------TGTGGAAGGGTTTCAGTGCACTTGGA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156291351 107 + 157873769 TCTCGTCC--TGCACCGGTAGCTGCTCCAGAGGGCC-TGTGAAGTTCCTGCCCCACAGTGCATC-TTCTGCACATC--------GGTGCTCGA--------------TGTAGAAGGGTTTCAGTGCCCTTGGA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170318705 107 + 172585720 TCTTGTCC--TGCACTGGCAGCTGCTCCAGAGGGCC-CATAAAGTTCCTGCCCCACAGCGCATC-TTCTGCACATC--------AGTGCTCCA--------------TGCAGAAGGGTTTCAGTGCACTGGGG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169064269 107 - 170955103 TCTTGTCC--TGCACTGGCAGCTGCTCCAGAGGGCC-CATAAAGTTCCTGCCCCATAGCGCATC-TTCTGCACATC--------AGTGCTCCA--------------TGCAGAAGGGTTTCAGTGCACTGGGG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8350830 107 + 10161646 TCTTGTCC--TGCACTGGCAGCTGCTCCAGAGGACC-CATAAAGTTCCTGCCCCACAGCGCATC-TTCTGCACATC--------AGTGCTCCA--------------TGCAGAAGGGTTTCAGTGCACTGGGG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1381673 107 + 3144229 TCTTGTCC--TGCACTGGCAGCTGCTCCAGAGGGCC-CGTAAGGTTCCTGCCCCACAGCGCATC-TTCTGCACATC--------AGTGCTCCA--------------TGCAGAGGGGTTTCAGTGCACTTGGG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96660007 107 + 98384682 TCTTGTCC--TGCACTGGCAGCAGCTCCGGAGGGCC-CGTAAAGTTCCTGCCCCACAGCGCATC-TTCTGCACATC--------CATGCTCCA--------------TGCAGAAGGGTTTCAGTGCACTTGGA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8205006 106 - 10857215 TCTTGTCC--TGCACTGGCAGCTGCTCCAGA-GGCC-CGTAAGGTTCCTGCCCCACAGCGCATC-TTCTGCACATC--------GGTGCTCCA--------------TGCAGAAGGGTTTCAGTGCACTTGGG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15598945 107 - 23502949 TCTTGTCC--TGCACTTGCAGCTGCTCCAGAGGGCC-CATAAAGTTCCTGCCCCACAGCGCATC-TTCTGCACATC--------AGTGCTCCA--------------TGCAGAAGGGTTTCAGTGCACTTGGG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169868901 107 + 171630274 TCTTGTCC--TGCACCAGCAGCTGCTCCAGAGGGAT-CCCAAGTTTCCTGCCCCACGATGCATC-TTCTGCACATG--------AGTGCGTGA--------------TGCAGAATGGCTTCAGTGGACTTGGA i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1281895 107 - 2905041 TCTCATCC--TGCACCAGCAGCTGCTGCCGAGGGAC-CCCAGGTTTCCTGCCCCATGATGCGTC-TTCTGCACGTG--------AGCGCTTGG--------------TGCAGAATGGCTTCCGTGGACTTGGA i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1238691 107 - 2164891 TCTTGTCC--TGCACCAGCAGCTGCTCCAGAGGGAC-CCCAGGTTTCCTGCCCCACGATGCATC-TTCTGCACGTG--------AGTGCTTGA--------------CGCAGAATGGCTTCCGTGGACTTGGA i cebCap1.NW_016107695v1 I 10 C 0 s aotNan1.NW_018494782v1 1491158 107 - 1813869 TCTCGTCC--TGCAGCGGCAGCTGCTCCAGAGGGAC-CCCAAGTTTCCTGCCCCACGATGCATC-TTCTGCACACG--------AGTGCTTGA--------------TGCAGAATGACTTCAGTGGACTTGGA i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10941545 91 - 12073884 -----TCC--CATGAGGGCAGCTGCTCCAG--GGCC-CCCGGG----CCACCCCACATC----C-TCCTACAGCTC--------AGGGCTGGG--------------CACAGA-GCATGTCAGTATTCTCTGA i otoGar3.GL873575 C 0 C 0 s dasNov3.JH569188 548537 125 + 760995 TTCTGTTTGATTGGGTGGACACTGCTCAAGAGGGCCTCTTGGTGTGCCTGTTACAATATTCTCCGTTCTACACATC--------AGTGCTTAAATAACTCCCAATGGTACCAAAAGGTTTTAGAATATTCTAA i dasNov3.JH569188 C 0 C 0 e canFam3.chr1 56161027 1683 + 122678785 I a score=6537113.000000 s hg38.chr6_KB021644v2_alt 92914 611 + 185823 ATGCCAAGGTG--AAAGTCTCATTTATTA--CACAGCATGGACACATAAATC-------AGGAATTTTCAGTCAATACA-AACA-------------TTTATTTTGATATAAAAAATA-ATTGTTTCT------TGTGTGGCTGACAAAGAG---TTAAAAAATCAGG-AATGCAGGCAGACTTTGAGAATGATGTATCTTTGCTTACTCTTCTTGACAGG-TTTCCTATTATTCATGGAAATCGGGGAATTCTGGCATCTTTTCAGGCCACCTGTAGAACATCTGGCATTCGTTT-AGG-AAAACGAGTTCATTAAAGAAACTATAATTTATTTGACTAC-TTTGGCACTCATGGG-ATACACTTGGTTGTCAATACTCTGGGCAAA----TTTGTGGGTGGGTAATTCTATGAGTGAGCAAACAACAGGGAAGAAACTCTTTTG--GAAGAGCTTGTG--CTTTGAATCCAG----------CCTGG----ATCAACACTGACAAGGCAGGGCTTGTCTCTT-CTCCACAGT---GACCACAGAT-ATCCATTCTGAGTT-TATAATGATTGTGATTTTT-T--------TTGTTTACCACAGCATTACATTTTTACTAAGCAGGTCACATGTGCCAATGCCTAA------TCACCA---GGCTACTAAAGAATAAAGCAAAACAT------GTAAAAGAGC- s panTro5.chr6 173544473 609 + 175400573 ATGCCAAGGTG--AAAATCTCATTTATTA--CACAGCATGGACATATGAATC-------AGGAATTTTCAGTCAATACA-AACA-------------TTTATTTTGATATAAAAAATA-ATTGTTTCT------TGTGTGGCTGACAAAGAG---TTAAAAAATCAGG-AATGCAGGCAGACTTTGAGAATGATGTATCTTTGCTTACTCTTCTTGACAGG-TTTCCTATT---CATGGAAATCGGGGAATTCTGGCATCTTTTCAGGCCACCTGTAGAACATCTGGCATTCGTTT-AGG-AAAACGGGTTCATTAAAGAAACTATAATTTATTTGACTAC-TTTGGCACTCATGGGGATACACTTGGTTGTCAATACTCTGGGCAGA----TTTGTGGGTGGGTAATTCTATGAGTGAGCAAACAACAGGGAAGAAACTCTTTTG--GAAGAGCTTGTG--CTTTGAAGCCAG----------CCTGG----ATCAACACTGACAAGGCAGGGCTTGTCTCTT-CTCCACAGT---GACCACAGAT-ATCCATTCTGAGTT-TATAATGATTGTGATTTTT-T--------TTGTTTACCACAGCATTACATTTTTACTAAGCAGGTCACATGTGCCAATGCTTAA------TCACCA---GGCTACTAAAGAATAAAGCAAAACAT------GTAAAAGAGC- i panTro5.chr6 C 0 C 0 s panPan2.chr6 171783045 609 + 173848474 ATGACAAGGTG--AAAATCTCATTTATTA--CACAGCATGGACATATGAATC-------AGGAATTTTCAGTCAATACA-AACA-------------TTTATTTTGATATAAAAAATA-ATTGTTTCT------TGTGTGGCTGACAAAGAG---TTAAAAAATCAGG-AATGCAGGCAGACTTTGAGAATGATGTATCTTTGCTTACTCTTCTTGACAGG-TTTCCTATT---CATGGAAATCGGGGAATTCTGGCATCTTTTCAGGCCACCTGTAGAACATCTGGCATTCGTTT-AGG-AAAACGGGTTCATTAAAGAAACTGTAATTTATTTGACTAC-TTTGGCACTCATGGGGATACACTTGGTTGTCAATACTCTGGGCAGA----TTTGTGGGTGGGTAATTCTATGAGTGAGCAAACAACAGGGAAGAAACTCTTTTG--GAAGAGCTTGTG--CTTTGAAGCCAG----------CCTGG----ATCAACACTGACAAGGCAGGGCTTGTCTCTT-CTCCACAGT---GACCACAGAT-ATCCATTCTGAGTT-TATAATGATTGTGATTTTT-T--------TTGTTTACCACAGCATTACATTTTTACTAAGCAGGTCACATGTGCCAATGCCTAA------TCACCA---GGCTACTAAAGAATAAAGCAAAACAT------GTAAAAGAGC- i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11465287 610 - 12463322 ATGCCAAGGTG--AAAATCTCATTTATTA--CACAGCATGGACACATAAATC-------AGGAATTTTCAGTCAATACA-AACA-------------TTTATTTTGATATAAAAAATA-ATTGTTTCT------TGTGTGGCTGACAAAGAG---TTAAAAAATCAGG-AATGCAGGCAGACTTTGAGAATGATGTATCTTTGCTTACTCTTCTTGACAGG-TTTCCTATTATTCATGGAAATCGGGGAATTCTGGCATCTTTTCAGGCCACCTGTAGAACATCTGGCATTCGTTT-AGG--AAACGAGTTCATTAAAGAAACTATAATTTATTTGACTAC-TTTGGCACTCATGGG-ATACACTTGGTTGTCAATACTCTGGGCAGA----TTTGTGGGTGGGTAATTCTATGAGTGAGCAAACAACAGGGAAGAAACTCTTTTG--GAAGAGCTTGTG--CTTTGAAGCCAG----------CCTGG----ATCAACACTGACAAGGCAGGGCTTGTCTCTT-CTCCACAGT---GACCACAGAT-ATCCATTCTGAGTT-TATAATGATTGTGATTTTT-T--------TTGTTTACCACAGCATTACATTTTTACTAAGCAGGTCACATGTGCCAATGCCTAA------TCACCA---GGCTACTAAAGAATAAAGCAAAACGT------GTAAAAGAGC- i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156291458 614 + 157873769 ATGCCAAGGGG--AAAGTCTCATTTATTA--CACAGCATGGACACATGAATC-------AGGAATTTTCAGTCAATCTATTTCT-------------TTTATTTTGATATAAAAAATA-ATTGTTTCT----TGTGTGTGGCTGACAAAGAG---TTAAAAAATCAGG-AATGCAGGCAGGCTTTGAGAATGATGTATCTTTGCTTATTCTTCTTGACAGG-TTTCCTATTATTCATGGAAATCGGGGAATTCTGGCATCTTTTCAGGCCACCTGTAGAACATCTGACATTCGTTT-AGG-AAAACGGGTTCATTAAAGGAACTATAATTTATTTGACTAC-TTTGGCACTCATGGGGATACACTTGGTTGTCAATACTCTGGGCAGA----TTTGTGGGTGGGTAATTCTATGGGTGAGCAAACAACAGGGAAGAAACTCTTTTG--GAAGAGCCTGTG--CTTTGAAGCCAG----------CCTGG----ATCAATACTGACAAGGCAGGGCTTGTCTCTT-CTCCACAGT---GACCACAGAT-ATCCATTCTGAGTT-TATAAT-ATTGTGATTTTT-T--------TTGTTTACCACAGCATTACATTTTTACTAAGCAGGACACATGTGCCAATGCCTAA------TCACCA---GGCTACTAAAGAATAAAGCAAAACAT------GTAAAAGAGC- i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170318812 622 + 172585720 ATGCCAAGGTG--AAAGTCTCATTTATTT--CACAGCATGGAAACATAAATC-------AGGAATTTTCAGTCATTACA-AACATT--------TCTTTTATTTTGATATAAAAAACA-ATTGTTTCT--TGTGTGTGTGTCTGACAAAGAG---TTAAAAAATCAGG-AATGCAGGCGGGCTTTGAGAATGATGTATCTTTGCTTATTCTTCCTGACAGG-TTTCCTATTATTCATGGAAATCAGGGAATTCTGGCATCTTTTCAGGCCACCTGTAGAACATCTGGCACTTATTT-AGG-AAAACGGGTTCATTAAAGGAACTATAATTTATTTGTCTAC-TTTGGCACCCATGGGGAAACACTTGGTTGTCAATACTCTGGGCAGA----TGTGTGGGTGGGTGATTCTATGGATGAGCAAACAACGGGGAAGAAACTCTTTTG--GAAGAGCCTGTG--CTTTGAAGGCAG----------CCTGG----ACCAATACTGACAAGGCAGGGCTTGTCTCTT-CTCTGCAGT---GACCACGGGT-ATCCATTCTGAGTT-TACAATGATTGTGAATTTTGT--------TTGTTTACCACAGCATTACATTTTTACTAAGCAGGACACATGTGCCAATCCCCGA------TCACCA---GGCTACCAAAGCATAAAGCAAAGCAT------GTGAAAGAGC- i rheMac8.chr4 C 0 I 240 s macFas5.chr4 169064376 620 - 170955103 ATGCCAAGGTG--AAAGTCTCATTTATTT--CACAGCATGGAAACATAAATC-------AGGAATTTTCAGTCATTACA-AACATT--------TCTTTTATTTTGATATAAAAAACA-ATTGTTTCT----TGTGTGTGTCTGACAAAGAG---TTAAAAAATCAGG-AATGCAGGCGGGCTTTGAGAATGATGTATCTTTGCTTATTCTTCCTGACAGG-TTTCCTATTATTCATGGAAATCAGGGAATTCTGGCATCTTTTCAGGCCACCTGTAGAACATCTGGCACTTATTT-AGG-AAAACGGGTTCATTAAAGGAACTATAATTTATTTGTCTAC-TTTGGCACCCATGGGGAAACACTTGGTTGTCAATACTCTGGGCAGA----TGTGTGGGTGGGTGATTCTATGGGTGAGCAAACAACAGGGAAGAAACTCTTTTG--GAAGAGCCTGTG--CTTTGAAGGCAG----------CCTGG----ACCAATACTGACAAGGCAGGGCTTGTCTCTT-CTCTGCAGT---GACCACGGGT-ATCCATTCTGAGTT-TACAATGATTGTGAATTTTGT--------TTGTTTACCACAGCATTACATTTTTACTAAGCAGGACACATGTGCCAATCCCCGA------TCACCA---GGCTACCAAAGCATAAAGCAAAGCAT------GTGAAAGAGC- i macFas5.chr4 C 0 I 240 s macNem1.NW_012011000v1 8350937 620 + 10161646 ATGCCAAGGTG--AAAGTCTCATTTATTT--CACAGCATGGAAACATAAATC-------AGGAATTTTCAGTCATTACA-AACATT--------TCTTTTATTTTGATATAAAAAACA-ATTGTTTCT----TGTGTGTGTCTGACAAAGAG---TTAAAAAATCAGG-AATGCAGGCGGGCTTTGAGAATGATGTATCTTTGCTTATTCTTCCTGACAGG-TTTCCTATTATTCATGGAAATCAGGGAATTCTGGCATCTTTTCAGGCCACCTGTAGAACATCTGGCACTTATTT-AGG-AAAACGGGTTCATTAAAGGAACTATAATTTATTTGTCTAC-TTTGGCACCCATGGGGAAACACTTGGTTGTCAATACTCTGGGCAGA----TGTGTGGGTGGGTGATTCTATGGGTGAGCAAACAACAGGGAAGAAACTCTTTTG--GAAGAGCCTGTG--CTTTGAAGGCAG----------CCTGG----ACCAATACTGACAAGGCAGGGCTTGTCTCTT-CTCTGCAGT---GACCACGGGT-ATCCATTCTGAGTT-TACAATGATTGTGAATTTTGT--------TTGTTTACCACAGCATTACATTTTTACTAAGCAGGACACATGTGCCAATCCCCGA------TCACCA---GGCTACCAAAGCATAAAGCAAAGCAT------GTGAAAGAGC- i macNem1.NW_012011000v1 C 0 I 120 s cerAty1.NW_012002071v1 1381780 619 + 3144229 ATGCCAAGGTG--AGAGTCTCATTTATTA--CACGGCATGGAAACATAAATC-------AGGAATTTTCAGTCATTACA-AACATT--------TCTTTTATTTTGATATAAAAAACA-ATTGTTTCT----TGTGTGTGTCTGACAAAGAG---TTAAAAAATCAGG-AATGCAGGCGGGCTTTGAGAATGATGTATCTTTGCTTATTCTTCTTGACAGG-TTTCCTATTATTCATGGAAATCAGGGAATTCTGGCATCTTTTCAGGCCACCTGTAGAACATCTGGCACTTGTTT-AGG-AAAACGGGTTCATTAAAGGAACTATAATTTATTTGTCTAC-TTTGGCACCCACAGGGAAACACTTGGTTGTCAATCCCCTGGGCAGA----TGTGTGGGTGGGTGATTCTATGGGCGAGCAAACAACAGGGAAGAAACTCTTTTG--GAAGAGCCTGTG--CTTTGAAGGCAG----------CCTGG----ACCAATACTGACAAGGCAGGGCTTGTCTCTT-CTCTGCAGT---GACCACGGGT-ATCCATTCTG-GTT-TATAACGATTGTGACTTTTGT--------TTGTTTACCACAGCATTACATTTTTACTAAGCAGGACACATGTGCCAATCCCCGA------TCACCA---GGCTACCAAAGCATAAAGCAAAGCAT------GTGAAAGAGC- i cerAty1.NW_012002071v1 C 0 I 138 s chlSab2.chr13 96660114 620 + 98384682 ATGCCAAGGTG--AAAGTCTCATTTATTA--CATGCCATGGAAACATAAATC-------AGGAATTTTCAGTCATTACA-AACATT--------TCTTTTATTTTGATATAAAAAACG-ATTGTTTTT----TGTGTGTGTCTGACAAAGAG---TTAAAAAATCAGG-AATGCAGGCAGGCTTTGAGAATGATGTATCTTCGCTTATTCTTCTTGACAGG-TTTCCTATTATTCATGGAAATCAGGGAATTCTGGCATCTTTTCAGGCCACCTGTAGAACATCTGGCACTTGTTT-AGG-AAAACGGGTTCACTAAAGCAACTATAATTTATTTGTCTAC-TTTGGCACCCATGGGGAAACACTTGGTTGTCAATACTCTGGGCAGA----TGTGTGGGTGGGTAATTCTATGGGTGAGCAAACAACAGGGAAGAAACTCTTTTG--GAAGAACCTGTG--CTTTGAAGGCAG----------CCTGG----ACCAATACTGACAAGGCAGGGCTTGTCTCTT-CTCTGCAGT---GACCACGGGT-ATCCATTCTGAGTT-TATAACGATTGTGAATTTTGT--------TTGTTTACCACAGCATTACATTTTTACTAAGCAGGCCACATGTGCCAATCCCTGA------TCACCA---GGCTACCAAAGCATAAAGCAAAACAT------GTGAAAGAGC- i chlSab2.chr13 C 0 I 69 s manLeu1.NW_012106474v1 8205112 616 - 10857215 ATGCCAAGGTG--AGAGTCTCATTTATTA--CATGGCATGGAAACATAAATC-------AGGAATTTTCAGTCATTACA-AACATT--------TCTTTTATTTTGATATAAAAAACA-ATTGTTTCT----TGTGTGTGTCTGACAAAGAG---TTAAAAAATCAGG-AATGCAGGCGGGCTTTGAGAATGATGTATCTTTGCTTATTCTTCTTGACAGG-TTTCCTATTATTCATGGAAATCAGGGAATTCTGGCATCTTTTCAGGCCACCTGTAGAACATCTGGCACTTGTTT-AGG-AAAACGGGTTCATTAAAGGAGCTATAATTTATTTGTCTAC-TTTGGCACCCACGGGGAAACACTTGGTTGTCAATACCCTGGGCAGA----TGTGTGGGTGGATGATTCTATGGGCGAGCAAACAACAGGGAAGAAACTCTTTTG--GAAGAGCCTGTG--CTTTGAAGGCAG----------CCTGG----ACCAATACTGACAAGGTAGGGCTTGTCTCTT-CTCTGCAGT---GACCACGGGT-ATCCATTCTGAGTT-TATAACGATTGTGAATTTTGT--------TTGTTTACCACAGCATTACATTTTTACTAAGCAGGACACATGTGCCAATCCCCGA------TCACCA---GGCTACCAAAGCATAAAGCAAAGCAT------GTGAAA----- i manLeu1.NW_012106474v1 C 0 I 22 s colAng1.NW_012114488v1 15599052 620 - 23502949 ATGCCAAGGTG--AAAGTCGCATTTATTT--CATAGCATGGAAACATAAATC-------AGGAATTTTCAGTCATTACA-AACATT--------TCTTTTATTTTGATATAAAAAACA-ATTGTTTCT----TGTGTGTGTCTGACAAAGAG---TTAAAAAATCAGG-AATGCAGGCAGGCTTTGAGAATGATGTATCTTTGCTTATTCTTCTTGACAGG-TTTCCTATTATTCATAGAAATCAGGGAATTCTGGCATCTTTTCAGGCCACCTGTAGAACATCTGGCATTTGTTT-AGG-AAAACGGGTTCACTAAAGGAACTATAATTTATTTGTCTAC-TTTGGCACCCATGGGGAAACACTTGGTTGTCAATACTCTGGGCAGA----TGTGTGGGTGGGTAATTCTATGGGTGAGCAAACAACAGAGAAGAAACTCTTTTG--GAAGAGCCTGTG--CTTTGAAGGCAG----------CCTGG----ACCAATACTGACAAGGCAGGGCTTGTCTCTT-CTCTGCAGT---AACCACAGGT-ATCCGTTCTGAGTT-TATAATGATTGTGAATTTTGT--------TTGTTTACCACAACACTACATTTTTACTAAGCAGGACACATGTGCCAATCCCTGA------TCACCA---GGCTTCCAAAGCCTAAAGCAAAACAT------GTGAAAGAGC- i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169869008 600 + 171630274 AGGCCAAGATG--AAAGCTTCATTTATTA--TACA-CATGGAAACATGAATC-------AGGAATTTTCAGTCGTTACA-AACATT--------TCTTTTATTTTGAGATAACAAGCG------TTTTTTTGTGTGTGTGGCTGACAGAGA------AAAAAATCAGG-AATGCAGG-AGACTTTGAGAATGATGGATCTTTGCTTATTCTTCTTGACAGG-TTTCCCATTATTTATGGAAATCGGGGGATTCTGGCATCTTTTCAGGCCACCTGAAGAACATCTGGCATTCGTTT-AGG-AAAACGGGTTCGTTAAAGGAATGGTAATTTATTTGACTAC--TTGGCACTCCTGGGGAAACACTTGGTTGTTGATACCCTGGGCAGA----TTTCTGGTTGGGTGAGTCTTTGGGTGAGCA---AACAGGGAA-ACGCTCTTTTG--GAAAAGCCTGTG--CTTTTAAGGCAG----------CCTGG----ATCAACGCTGACAAGGCAGGGTTTACCTCTG-CTTCTCCGT---GACCACAGAT-ATGGATTCTGACTT-TATAATGA-TGTGAATTTT-C--------TTGTTTACCACAGAGTTACATTCCTACTAAGCAGGACACGTGT------GCCTAA------TCACCG---GGCTACCCAAGAATAAAGCAAA-CAT------GTAAAAGAGC- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1282002 608 - 2905041 AGGCCAAGGTG--AAAGCTTCATTTATTA--TACAGCACGGAAACACGAATC-------AGGAATTTTCAGTCATTACA-AACATT--------TCTTTTATTTTGAGATAAAAAGTG------TTTT----TGTGTGTGGCTGACAAAGAG-----AAAAAATCAGG-AATGCAGGCAGACTTTGAGAATGATGGATCTTTGCTTATTCTTCTTGACAGG-TTTCCTGTTATTTATGGAAATCGGGGAATTCTGGCATCTTTTCAGGCCACCTGTAGAACATCTGGCATTCATTT-AGG-AAAACGGGTTTGGTAAAGGAACAATAATTTATTTGACTAC-TTTGGCACTCATGGGGAAACACGTGGTCATTGCTACTCTGGGCAGA----TTTGTGGTTGGGTGAGTCTTTGGGTGAGCAAGCAACAGGGAT-AAACTCTTTTG--GAAAAGCCTGTG--CTTTTACGGCAG----------CCTGG----ATCAATACTGATAAGCCAGGGTTTATCCCTT-CTTCTCAGT---GACCACAGTT-ATTGATACTGAGTC-TATCATGA-TTGTGATTTT-T--------TTGTTTACCACAGAGTTACATTCCTACCAAG-AGGACACATGTGTGGACGCCTAA------TCACCA---GGCTACCCAAGAAAAAAGCAGA-CAA------GTCACAGAGC- i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1238798 609 - 2164891 ATGCCAAGGTG--AAAGCTTCATTTATTA--CAGAGCATGGAAACACGAATC-------AGGAATTTTCAGTCATTGCA-CACATT--------TC-TTTATTTTGAGATAAAAAGTG------TTTC----TGTGTGTGGCTGACAAAGAG-----AAAAAATCAGG-AATGCAGGCAGACTTTGAGAATGATGGATCTTTGCTTATTCTTCTTGACAGG-TTTCCTATTATTCATGGAAATCGGGGAATTCTGGCATCTTTTCAGGCCACCTGTAGAACATCTGGCATTCGTTT-AGG-AAAATGGGTTCAGTAAAGGGACAATAATTTATTTGGCTAC-TTTGGCACTCATGGGGAAACACGTGGTTGTTGATACTCCGGGCAGA----TTTGTGGTTGGGTGAGTCTTTGGGTGAGCGAACAATAGGGAA-AAACTCTTTTG--GAAAAGCCTGTG--CTTTTATGGCAG----------CCTGG----ATCAATACTGACAAGACAGGGTTTATCCCTT-CTTCTCAGT---GACCACAGAT-ACCGATTCTGACTT-TATAATGATTGTGAATTTT-T--------TTGTTTACTACAGAGTTACATTCCTACTAAGCAGGACACATGTGCGGATGCCTAA------TCACCA---GGCTACCCAAGAATAAAAGAAA-CAT------GTAAAAGAGC- i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1491265 604 - 1813869 ACGCCAAGGTG--AAATCTTCATTTATTA--TACAGCGTGGAAACACGAATC-------AGGAATTTTCAGTCATCACA-AACAAT--------TCTTTTATTTTGAGATAAAAAGTG------TTTT----TCTGTGTGGCTGACAAAGAG-----AAAAAACCAGG-AATGCAGGCAGACTTTGAGAATGATGGATCTTTGCTTATTCCTCTTGACAGG-TTTCCTATTATTTATGGAAATCGGGGAATTCTGGCATCTTTTCAGGCCACCTGTAGAACATCTGGCATTCGTTT-AGG-AAAACGGGTTCGTTAAAGGAACAATAATTCATTTGACTGC-TTTGGCACTCACGGGGAAACACTTGGTTGTT-ATACTCTGGGCAGA----TTTGTGGTTGGGTGAGTCTTCGGGTGAGCAAACAACGGGGAA-AAGCTCTTTTG--GAAAAGCCTGCG--CTTTTAAGGCAG----------CCTGG----GTCAATACTGACAAGGCAGGGTTTCTC---T-CTTCTCAGT---GACCACAGAT-ATCGATTCTGAGTT-TATAATGATGGTGAATTTT-T--------TTGTTTACCACAGAGTTACGTTCCTACTAAGCAGGACACATGTGCGGACGCCTCA------TCACCA---GGCTAGCCGAGCATGAGGCAAA-CGT------GT--AAGAGC- i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10941636 592 - 12073884 ACGTCAAGGTACTAGCATATCATTTATTT--TA--------------------------------TTTTAGT-ATAAGG-AAGACTATGGTGTATTTTTTTTTttgttgt----tgtt-gttgttgtt----TTTTTG-GGTTGACAAAGAG---TTAAAACATCAGG-AATGCTGGCCGACTTTCAGAATGATGTATCCTTGCTTATTCT------CAGGTTTTCCTATTATTTATGGGAATTGAGGACTTGTGGCAATCTTATAGGCCACCTGCGGAACATCTGGCATTCATTC-AGG-GAAACGGGCTTGTTAAAGGAGCCATAATTCATTTGACTATTTTTGGCACTGGCTGGGAAATGCTTGGTTGTCAGTATCCAAGGCAGA----TTTGTGAGTGGGAGATTGCA---GTGTGTA-ACGGTAGGGG--AAACACCTTGG--GAGAACCGTGAT--TTTAGCAGCCTG----------CCCAG----ATCAATACTGAAGGCACGAGTTTCGTCTCCG-GTCCTGAGG---GACCCCAGGT-AGAGGCTCTGGATT-TGGTGCAATGGTAAATGTT----------TTGTTTGCCATAGTGTTAGAACCTTACTAATCACAGCGTATGTGCTGCAGCCTAA------TCAACA---ACATATCAAA-AATAAAGCAAAATATACCTACATGAAAAATC- i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56162710 618 + 122678785 ATGCCGAGAGC--AAAGCCCCATTTATTC--TACTACATAGAAATATCAGCC-------AGAAGTTGTCATCCATTACT-ACCATT--------TCTTTTATCTTGATATAAAGAAAGTAGGGCTTTT----------TAGTTGACAAAGAG---TTAACAAG-CAGG-AATGCTG-------------ATGATCTATCTTTGCTTATTCTCCTTGACGGC-TTTCCTATTATTTATGGGAACCAGGGGACTGTGGCATTCTATCAGCCCACCTGTAAAACATCTGGCATTCATTT-AGGGGGAGCTGGTTCATTAAGGGAGCTGTAATTTATTGGACTAT-TTTGGCATTGGTCAGGAAATACTCGGTTGTCAATATTCTGAGCAGACCGGTGTGTGGGTGCGTGACCCGATGGGTGTGCAAATAACAGCAA--ACACTCTTTAGAAGAAGAGCCCGAGGCTTTAAAAGGAAG----------CCTGG----CTCAGCACTGACCGCACGTGGA------CTT-CTCTGTAGCGGGGACCAGAAAT-AACGGGTCTGAATT-TGTATTAAGTGCCATTTTT-TTTGTTTTGTTGTTTACGATATTGTTACATTCCTGCTAATCACGACGTGTCCACTAAAAACCAATCACAGTCACCA---ATCTATCAAAGAGCAAAGCAGAGTAC------AGGAAAGGTC- i canFam3.chr1 I 1683 C 0 s dasNov3.JH569188 548662 640 + 760995 ATGCCAAGAGC--AAAGACATATATATTTTCTACTATATAAAAGCATTAAACAAAAAAAAAAAAACTTACTTCATTACT-AGCCTT--------ACTTTTATTTTGATTTAAATAAAA-CTACTTTTC------TTTTTAGTTAACAAAAAGTTTTTAAAAAATCAGGAAATCTTGAAGGACTTTTAAAATGATCTAGCTTTGCTTATTCTTTTTGACTGCTTTTCCTATTATTTATGGGATTCGGGGAATTGTGGCATTCTTTCAGATCACCTGTAAAACATCTGGCATTCGTTTAAGG-GAAAATGGTTCATTAAAGGAGGCATAATTTATTTGATTGTTTTTGACGCTGGCCAGGAAACATTTGGTTGTCAATATTCTAGGCAGA----CATGTGGGTAGGGAATTCCATGTGTGCATAAACAACA------AAAATCT------AAAGGACCCATG--GTTTTAAGAAATAAACTAACTCCTTGGCCTCATCAATACCAATGATACAGGACTTTTCCTTTACTCTTTAGG---GACCATCGATAATAGGTTCTGAATTCCATAATGCTTTCATATT---T--------TGGTTTACCATATTATTATATTCTTACTAGTCACTGCATATACACTAGAGTCTAA------TCAACATCTTTCCATCAAAAAACCAAGCAAG--AT------ACAGAAAAACC i dasNov3.JH569188 C 0 C 0 a score=4198817.000000 s hg38.chr6_KB021644v2_alt 93525 442 + 185823 CCTGGGGTCCTGAAGACCTGCCTCGA-AAATCAA--TGGTGCTGTTTAACTTTCCATCCTTAGAGACTGACAAAATGATTTTTGAAAATACTATCAGGATCCGATATTTCTGTCCTGTGTAAAAAT-GGGGTAGGAAGGGAAATAGC-CAA--------CAAAATTCCTAATAAAGAAAGGTGAAAAC-A-AGGTGACTTTCCCATTGCTCTTCTAAATTAGATCTTTACTTAGGAAAAA--------------TGCTTTTTTTTTTTTTTCTGCCATGGGGA--TTTAAAAAAAAAAC----TGCTAATTTCATGACAGGAAATTTCTGAGAGTAAAATGTAGACTACAAGATACATTCAC-TTTTTTTCAGTGTAGCTCAACAGCACATGGGTCAGGCCCCAAAAGAAACATATTTTACCCACAATGCTTTATGATTGACAAGGAATTATAGACTTCTCTTT-TTCATTTCTGATTA s panTro5.chr6 173545082 443 + 175400573 CCTGGGGTCCTGAAGACCTGCCTCGA-AAATCAA--TGGTGCTGTTTAACTTTCCATCCTTAGAGACTAACAAAATGATTTTTGAAAATACTATCAAGATCCGATATTTCTGTCCTGTGTAAAAAT-GGGGTAGGAAGAGAAATAGC-CAA--------CAAACTTCCTAATAAAGAAAGGTGAAAAC-A-AGGTGACTTTCCCATTGCTCTTCTAAATTAGATCTTTACTTAGGAAAAA--------------CGCTTTTTTTTTTT---CTGCCATGGGGA--TTTAAAAAAAAAACAAACTGGTAATTTCATGACAGGAAATTTCTGAGAGTAAAATATAGACAACAAGATACATTCAC-TTTTTTTCAGTGTAGCTCAACAGCACATGGGTCAGGCCCCAAAAGAAATATATTTTACCCACAATGCTTTATGATTGACAAGGAATTATGGACTTCTCTTT-TTCATTTCTGATTA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171783654 443 + 173848474 CCTGGGGTCCTGAAGACCTGCCTCGA-AAATCAA--TGGTGCTGTTTAACTTTCCATCCTTAGAGACTAACAAAATGATTTTTGAAAATACTATCAAGATCTGATATTTCTGTCCTGTGTAAAAAT-GGGGTAGGAAGAGAAATAGC-CAA--------CAAACTTCCTAATAAAGAAAGGTGAAAAC-A-AGGTGACTTTCCCATTGCTCTTCTAAATTAGATCTTTACTTAGGAAAAA--------------CGCTTCTTTTTTTT-TTCTGCCATGGGGAATTTAAAAAAAAAAAC----TGGTAATTTCATGACAGGAAATTTCTGAGAGTAAAATATAGACAACAAGATACATTCAC-TTTTTTTCAGTGTAGCTCAACAGCACATGGGTCAGGCCCCAAAAGAAATATATTTTACCCACAATGCTTTATGATTGACAAGGAATTATGGACTTCTCTTT-TTCATTTCTGATTA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11465897 441 - 12463322 CCTGGGGTCCTGAAGACCTGCCTCGA-AAATCAA--TGGTGCTGTTTAACTTTCCATCCTTAGAGACTGACAACATGATTTTTGAAAATACTATCAGGATCCGATATTTCTGTCCTGTGTAAAAAT-GGGGTAGGAAGAGAAATAGC-CAA--------CAAACTTCCTAATAAAGAAAGGTGAAAAC-A-AGGTGGCTTTCCCATTGCTCTTCTAAATTAGATCTTTACTTAGGAAAAA--------------TGCTTTTTTTTTTT--TCTGCCATGGGCA-TTTAAAAAAAAAAAC----GGCTAATTTCATGACAGGAAATTTCTGAGAGTAAAATGTAGACTACAAGATACATTCAC-TTTTTTTCAGTGTAGCTCAACAGCACATGGGTCAGGCCCCAAAAGAAACATATTTTACCCACAATGCTTTATGATTGACAAGGAATTATGGACTTCTCTTT-TTCATTTCTGATTA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156292072 436 + 157873769 CCCGGGGTCCTGAAGTCCCGCCTCGA-AAATCAA--TGGTGCTGTTTAACTTTCCATCCTTAGAGACTGACAAAATGATTTTTGAAAATACTGTCAGGATCTGAGATTTCTGTCCTGTGTAAAAAT-GGGGTAGGAAGAGAAATAGC-CAA--------CAAACTTCCTAATAAAGGAAGGTGAAAAC-A-AGGTGACTTTCCCATTGCTCTTCTAAATTAGATCTTTACTTAGG-AAAA--------------TGCTTTTTTTTTTT---CTGCCATGGGGA--TTT--AAAAAAAAC----TGCTAATTTCATGATAGGAAATTTCTGAGAGTAAAATATAGACTGCAAGATACATTCAC-TTTTTTTCAGTGTAGCTCAACAGCACGTGGGTCAGGCCCCAAAAGAAATATATTTTACCCACAATGCTTTCTGATTGACAAGGAATTATGGACTTCTCTTT-CTCATTTCTGATTA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170319674 436 + 172585720 CCTGGGGCCCTGAAGACCTGCCTCAA-AAATCAA--TGGTGCTGCTTAACTTTCCATCCTTAGAGACTGACAAAATGATTTTTGAAAATACTGTCAAGATCTGGGATTTCTGTCCTATGTAAAAAG-GGGGTAGGAGGAGAAATAGC-CAA--------CAAGCTTCCTAATAAACAAAGGTTAAAAC-A-AGGTGATTTTCCCATTGCTCTTCTAAATCAGAT-----CTTAGGAAAAA--------------CGCTTTTTTTTTTT-TTTTGCTATGGGGA--TTT-AAAAAAAAAC----TGTTAATTTCATGACAGGAAATTTCTGAGAGTAAAATATAGACTATAAGATACATTCAC-TTTTTTTCAGTGTGGCTCAACAGTACATGGGTCAGGACCCAAAAGAAATCCATTTTACCCACAATGCTTTATGATTGACAAGGAATTATGGACTTCTCTTTTTTCATTTCTGATTA i rheMac8.chr4 I 240 C 0 s macFas5.chr4 169065236 435 - 170955103 CCTGGGGCCCTGAAGACCTGCCTCAA-AAATCAA--TGGTGCTGCTTAACTTTCCATCCTTAGAGACTGACAAAATGATTTTTGAAAATACTGTCAAGATCTGGGATTTCTGTCCTATGTAAAAAG-GGGGTAGGAGGAGAAATAGC-CAA--------CAAGCTTCCTAATAAACAAAGGTTAAAAC-A-AGGTGATTTTCCCATTGCTCTTCTAAATCAGAT-----CTTAGGAAAAA--------------CGCTTTTTTTTTTT-TTTTGCTATGGGGA--TTT--AAAAAAAAC----TGTTAATTTCATGACAGGAAATTTCTGAGAGTAAAATATAGACTATAAGATACATTCAC-TTTTTTTCAGTGTGGCTCAACAGTACATGGGTCAGGACCCAAAAGAAATCTATTTTACCCACAATGCTTTATGATTGACAAGGAATTATGGACTTCTCTTTTTTCATTTCTGATTA i macFas5.chr4 I 240 C 0 s macNem1.NW_012011000v1 8351677 435 + 10161646 CCTGGGGCCCTGAAGACCTGCCTCAA-AAATCAA--TGGTGCTGCTTAACTTTCCATCCTTAGAGACTGACAAAATGATTTTTGAAAATACTGTCAAGATCTGGGATTTCTGTCCTATGTAAAAAG-GGGGTAGGAGGAGAAATAGC-CAA--------CAAGCTTCCTAATAAACAAAGGTTAAAAC-A-AGGTGATTTTCCCATTGCTCTTCTAAATCAGAT-----CTTAGGAAAAA--------------CGCTTTTTTTTTTT-TTTTGCTATGGGGA--TTT--AAAAAAAAC----TGTTAATTTCATGACAGGAAATTTCTGAGAGTAAAATATAGACTATAAGATACATTCAC-TTTTTTTCAGTGTGGCTCAACAGTACATGGGTCAGGACCCAAAAGAAATCTATTTTACCCACAATGCTTTATGATTGACAAGGAATTATGGACTTCTCTTTTTTCATTTCTGATTA i macNem1.NW_012011000v1 I 120 C 0 s cerAty1.NW_012002071v1 1382537 442 + 3144229 CCTGGGGCCCTGAAGACCTGCCTTGA-AAATCGA--TGGTGCTGCTTAACTTTCTATCCTTAGAGACTGACAAAATGATTTTGGAAAACACTGTCAAGATCTGGGATTTCTGTCCTATGTAAAAA--GGGGTAGGAGGAGAAATAGC-CAA--------CAAGCTTCCTAATAAACAAAGGTTAAAAC-A-AGGTGATTTTCCCATTGCTCTTCTAAATCAGATCTTTACTTAGGAAACATGT---------TTTGTTTTGTTTTGTT-TTTTGCCATGGGGA--TTT-----AAAAAC----TGTTAATTTCATGACAGGAAATTTCTGAGAGTAAAATATAGACTATAAGATACATTCACTTTTTTTTCAGTGTGGCTCAACAGTACCTGGGTCAGGACCCAAAAGAAATCTATTTTACCCACAATGCTTTATGATTGACAAGGAACTATGGACTTCTCTTTCTTCATTTCTGATTA i cerAty1.NW_012002071v1 I 138 C 0 s chlSab2.chr13 96660803 451 + 98384682 CCTGGGACCCTGAAGACCTGCCTCGA-AAATCAA--TGGTGCTGCTTAACTTTCCATCCTTAGAGACTGACAAAATGATTTTTGAAAATACTGTCAAGATTTGGGATTTCTGTCCTATGTAAAAAG-GGGGTAGGAGGAGAAATAGC-CAA--------CAAGCTTCCTAATAAACAAAGGTTAAAAC-A-AGGTGACTTTCCCATTGCTCTTCTAAATCAGACCTTTACTTAGGAAAAAtgttttgttttgtttgttttgttttgtt-ttTTGCCATGGGGA--TTT-----AAAAAC----TCTTAATTTCATGACAGGAAATTTCTGAGAGTAAAATATAGACTATAAGATACATTCAC-TTTTTTTCAGTGTGGCTCAACAGTACCTGGGTCAGGACCCAAAAGAAATCTATTTTACCCACAATGCTTTATGATTGACAAGGAATTATGGACTTCTCTTTTTTCATTTCTGATTA i chlSab2.chr13 I 69 C 0 s manLeu1.NW_012106474v1 8205750 441 - 10857215 CCTGGGACCCTGAAGACCTGCCTTGA-AAATCAA--TGGTGCTGCTTAACTTTCTATCCTTAGAGACTGACAAAATGATTTTGGAAAACACTGTCAAGATCTGGGATTTCTGTCCTATGTAAAAA--GGGGTAGGAGGAGAAATAGC-CAA--------CAAGCTTCCTAATAAACAAAGGTTAAAAC-A-AGGTGATTTTCCCATTGCTCTTCTAAATCAGATCTTTACTTAGGAAAAATGT---------TTTGTTTTGTTTTGTT-TTTTGCCATGGGGA--TTT-----AAAAAC----TGTTAATTTCATGACAGGAAATTTCTGAGAGTAAAATATAGACTATAAGATACATTCACTTTTTTTTCAGTGTGGCTCAACAGTACCTGGGTCAGGACCC-AAAGAAGTCTATTTTACCCACAATGCTTTATGATTGACAAGGAACTATGGACTTCTCTTTTTTCATTTCTGATTA i manLeu1.NW_012106474v1 I 22 C 0 s colAng1.NW_012114488v1 15599672 435 - 23502949 CCTGGGGCCCTGAAGACCTGCCTCGA-AAATCAG--TGGTGCTGCTTAACTTTCCACCCTTAGAGACTGACAAAATGATTTTTGAAAATACTGTCAAGATCTGGGATTTCTGTCCTATGTAAAAAG-GGAGTAGGAGGAGAAATAGC-CAA--------CAAGCTTCCTAATAAACAAAGGTTAAAAC-A-AGGTGACTTTCCCATTGCTCTTCTAAATCAGAT-----CTTAAGGAAAA--------------CACTTT-TTTTTTT-TTTTGCCATGGGGA--TTA-AAAAAAAAAC----TGTTAATTTCATGACAGGAAATTTCTGAGAGTAAAATATAGGCTACAAGATACTTTCAC-TTGTTTTCAGTGTGGCTCAACAGTACCTGGGTCAGGACCCAAAAGAAATCTATTTTACCCACAATGCTTTATGATTGACAAGGAACTATGGACTTCTCTTTTTTCATTTCTGATTA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169869608 429 + 171630274 CTCAGGGTCCT-AAGACCTGCCTCAA-AAATCAA--TAGGGCTGTTTAGCTTCCTACCCTTAGAGACGGACAAAATGGTTTCTGAAAACACTGTCAAGATCTGAGATTTCTGTCACACGTAAAAAT-GGGGTGGGAAGAGAAATAGC-CAA--------AAAACATCCCGATAAAGAGAGGTGAATCC-A-AGGTGACTTTCCCATTGTTTTTCTAAATCAGATCTTTACCTAGAAAAAA-------------ATGCAC--TTTTTTT-----GCCATGGGGA--TTT---AAAGAAAC------TTAATTTCATGATAGGACATTTCTGAGGGCAAAATATAGACCACAAGATAGATTCAT-GTTTTTCCAATGTGGCTCCACAGTACACAGGTCAGGCCCCAAAAGAA--ATAGTTTACCCACAATGCTTTATGATTGACAAGGGATTATGGACCTCTCTTTCTTCATTTCCAATTA i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1282610 395 - 2905041 CTCAGGGTCCTGAAGACCTGCCTGGA-AAATCAG--TAGGGCTGTTTAACTTTCTACCC-GAGAGACGGACAAAATGGTTTCTGAAAATCCTGTCGAGATCTGAAATTTCTGCCACATGTAAAAAT-GGGGTGAGAAGAGAAATAGC-CAA--------AACAGGTCCCAGTAAAGAGAGGTGAAGCC-A-AGGTGACTTTCCCATTGCTTTCCGAAATCAGATCTTAACCTATAAAAAA-------------ATGCATTGTTTGTTC-----GCCATGGGGG--TTT---AAAAAAAC----TGTTAATTTCATGATAGGACATTTCTGAGAACAAAATATAGACTACATGA----------------------------------------GTCAGGCCCCAAAAGAAATATAGTTTACCCACAATGGTTTATGATTGACAAGGGATTATGGACTTCTCTTTCTTCATTTCTGATT- i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1239407 428 - 2164891 CTCAGGGTCCTGAAGATTTGCCTCAA-AAATCAA--TAGGGCTGTTTAACTTTCTACCCTTAGAGATGGACAAAATGGTTTCTGAAAATACTGTCAAGATCTGAGATTTCTGTCACATGTAAAAAT-GGGGTGGGAAGAGAAATAGC-CAA--------AAAACGTCCCAATAAAGAGAGGTGAACCC-C-AGCTGAC--TCCCATTGCTTTTCTAAATCAGATCTTTACCTAGAAAAAA-------------ATGCATTTTTTTTTT-----GCCATGGGGA--TTT---AAAAAAAC----TGTTAATTTCATGATAGGACATTTCTGAGAGCAAAACATAGACTACAAGATAGATTCAC-TTTTTTCCAATGTTGCTCCACAGTACACG-GTCGGGCCCCAAAAGAAATATACTTTACCCACAATGCTTTATGATTGACAAGGGATTATGGA-----CTTTCTTCATTTCTGATTA i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1491869 435 - 1813869 CTCAGGGGCCTGAAGACCTGCCTCGA-AAATCAA--TAGGTCTGTTTAACTTCCTACCCTTAGAGACGGACAAAACGGTTTCTGAAAGTACTGTCAAGACCTGAGATTTCTGTCACGTGTAAAAAT-GGAGTGGGAAGGGAAATAGC-CAA--------AAAACGTCCCAATAAAGAGAGGTGAACCC-A-AGGTGACGTTCCCATTGCTTTTCTAAGTCAGATCTTTACCTAGAAAAAA-------------ATGCATT-TTTCTTT-----GCCATGGGGA--TTT---AAAAAAAC----TGTTAATTTCATGATAGGACATTTCCGAGAGCAAAATATGGACTACAAGAGAGATTCAC-TTTTTTCCAATGTGGCTCCACAGTACACGGGTCAGGCCCCGAAAGAAATTTAGTTTACCCACAATGCTTTATGACTGACAAGGGATTATGGACTTCGCCTTCTTAATTTCTGATTA i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10942228 384 - 12073884 CTCAGAGTCTTGAAAACCTGCCTGTG-GAAATCA--CAGAGCTGTTTGACTCTCCACCCGTAAAGGCC-CCGAGATGGAGACTAAAAATGCTCTCAGGAACAGACGCCTCTGGCCTGTGTAAAAGT-AGG--CAGGAGAGAAATAGCAAAA--------CAAACTGTCTAGTAAA-----GTCACAGC-A-AGGTGACTTTCTCACTGAATTTCTGAACCAGATCCTTACCTAGGAAAAA--------------TGGATC----TTTT-----GCCAGGGGAA--TTG----AAAAAAC--TGTGTTAATTTCATAACAGGAAATT-----------------------------GATTGAG---TTCTTCACTGTGGTTCAGCTACACACGGGTCAGAACACAACAGAAA--TACGTCACCCACGGGGCTTTCTGATTGAC--GGGGTGGTGGGTTTCTCCTT------TTCTGATTA i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56163328 400 + 122678785 CTCAGGATCCTGAGAGCATGCCTAAAGGGATGGA--TCATACTA--GAATTTGTCCTCCCTGCAGG-TGACGGGA-GGCCCGTGGCGAAGCTGTCAGGAACCGACATC-CCGTCGTATGTAACGAT-GAGACCGCAGGA-AGGTAAC-TGA--------GACTCTTCCCAACAAAGAAAGTTCACGAC-ACAGGTGACTTTCCCATTGCAATTCCAAGTCGGACCCTTGCACGAGGAAAG--------------CACATTTTGTGTCC---------CGGGGA--CTG---GGAGCACC---ATGGGGATGTCATGACCAGGATTTACTGCCAAT-AAATGTGGGCTATGAGCCGGATTCGG--CTTTTCCAATAGGATAAAATGGTGCATG-GTCGGGGCCCACAGAAAG--TATTTTACCTGCAGAG------------CAGGGGCTTGTGGATT--------TGCTTTTTTGA--- i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 549302 424 + 760995 CTCAGAATCATGCAAACCTACCTGAA-GAGATAAGTTGAACTTATTTGATGTACCATCCTTAGAGACTTACAAAACGGATATGGCAAATATTGTCAAGAACTGACATTTCTGTCATGTGTAAAAATAGGAACAGGAAGAGAAATAAC-TTAAAATAACTTAATATTACTAACAAAGAAATATTAGGATGA-AAGTGATTTTCCCATCTCAATTCTAA-----------------GAAAAA--------------TG-----TTTTGTT---TTGCCAAGGGGA--TTT----AAAGAGC--TGTGCTAATTTCGTGACAGGAAATTATTGAGAGTAAAATGTGGACTACTAAATAAATTCAA--TTTTTCCAATACGATTAAACAAGGTCTGGGTCAGGGGCCAAAGGAAA--TATTTCACCTACAATGCAGTATGATTGACAGGGAGTTGTGGATTTC-CTTTATTCTTTTGTGATTA i dasNov3.JH569188 C 0 C 0 a score=718693.000000 s hg38.chr6_KB021644v2_alt 93967 69 + 185823 CATAGATAAAAACAAAATTTGACCGAGATCTTTGATGATAATATCCAACATGTGAGAAGATATTTTCTA s panTro5.chr6 173545525 69 + 175400573 CATAGATAAAAACAAAATTTGACCGAGATCTTTGATGATAATATCCAACATGTGAGAAGATATTTTCTA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171784097 69 + 173848474 CATAGATAAAAACAAAATTTGACCGAGCTCTTTGATGATAATATCCAACATGTGAGAAGATATTTTCTA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11466338 69 - 12463322 CATAGATAAAAACAAAATTTGACCGAGATCTTTGATGATAATATCCAACATGTGAGAAGATATTTTCTA i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170320110 69 + 172585720 CATAGATAAAAACAAGATTTGACTGAGATCTTTGATGATAATATCCAACATGTGAGAAAATATTTTCTA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169065671 69 - 170955103 CATAGATAAAAACAAGATTTGACTGAGATCTTTGATGATAATATCCAACATGTGAGAAAATATTTTCTA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8352112 69 + 10161646 CATAGATAAAAACAAGATTTGACTGAGATCTTTGATGATAATATCCAACATGTGAGAAAATATTTTCTA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1382979 69 + 3144229 CATAGATAAAAACAAAATTTGACTGAGATCTTTGATGATAATATCCAACATGTGAGAAAATATTTTCTA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96661254 69 + 98384682 CATAGATAAAAACAAAATTTGACTGAGATCTTTGATGATAATATCCAACATGTGAGAAAATATTTTCTA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8206191 69 - 10857215 CATAGATAAAAACAAAATTTGACTGAGATCTTTGATGATAATATCCAACATGTGAGAAAATATTTTCTA i manLeu1.NW_012106474v1 C 0 I 238 s colAng1.NW_012114488v1 15600107 69 - 23502949 CATAGATAAGAACAAAATTTGACTGAGATCTTTGATGATGATATCCAACACGTGAGAAAATATTTTCTA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169870037 69 + 171630274 CACAGATAAAAACACAGTCTGACCAAGATCTTTGATGATGATATTCAACGTGTGAGGAAACGCTTTCCA i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1283005 58 - 2905041 -----------GCACAGTTTGACCAGGATCTTTGACGATAATGTCCAACATGTGAGGAAATGCTTTCCA i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1239835 69 - 2164891 CACAGATAAAAACACAATTTGATGAAGATCTTTGATGATAATATCCAACATGTGAGGAAATGCTTTCCA i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1492304 69 - 1813869 CACACATAAAAACACAGTTTGACCAAGATCTCTGATGATAATATCCAACATGTGAGGAAATGCTTTCCA i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10942612 62 - 12073884 TGAAGATAAAAATAAAATTTAACC-------TTAATGGTAATTTACAACATGTGGGAAAATATTTCTTA i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56163728 63 + 122678785 ---AGATAAAAATAAAATCCAATGGAGATCTT---CGATAATTTCCAACATGTAGGATAATATTTCCTG i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 549726 69 + 760995 TGAAGATAAAAATAAAATTTGACTGAGCTCTTTGATGATAATCTCCCACAGGTGGGAAAATATTACTTA i dasNov3.JH569188 C 0 C 0 e nomLeu3.chr3 156292508 0 + 157873769 C a score=300558.000000 s hg38.chr6_KB021644v2_alt 94036 41 + 185823 TAATTGCCAT--ACATGAACTCGAGAA-TTTTGCCAGAATTTTG s panTro5.chr6 173545594 41 + 175400573 TAATTGCCAT--ACATGAACTCGAGAA-TTTTGCCAGAATTTTG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171784166 41 + 173848474 TAATTGCCAT--ACATGAACTCGAGAA-TTTTGCCAGAATTTTG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11466407 41 - 12463322 TAATTGCCAT--ACATGAACTCGAGAA-TTTTGCCAGAATTTTG i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170320179 38 + 172585720 TAATTGCCGT--ACATGAACTC---AA-TTTTGCCACAATTTTG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169065740 38 - 170955103 TAATTGCCGT--ACATGAACTC---AA-TTTTGCCACAATTTTG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8352181 38 + 10161646 TAATTGCCGT--ACATGAACTC---AA-TTTTGCCACAATTTTG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1383048 41 + 3144229 TAATTGCCGT--ACATGAACTCAAGAA-TTTTGCCACAATTTTG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96661323 39 + 98384682 TAATTGCCAT--ACATTAACTC---AATTTTTGCCACAATTTTG i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15600176 41 - 23502949 TAATTGCCGT--ACGTGAACTCAAGAA-TTTTGCCACAATTTTG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169870106 41 + 171630274 GAACTGCCAT--ACGTGAACTCAAGAA-TTTTGCCAGAAGTTTG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1283063 41 - 2905041 TAACTGCCAT--ACATGAACTCAAGAA-TTTTGCCAGAATTTTG i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1239904 41 - 2164891 TAACTGCCAT--ACATGAACTCAAGAA-TTTTGCCAGAATTTTA i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1492373 41 - 1813869 TAACTGCCGT--ACGTGAACTCAAGAA-TTTTGCCAGAATTTTG i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10942674 37 - 12073884 ----TGCTTG--TCATGAAGACAAGAA-TTTTGCCAGAATTTTG i otoGar3.GL873575 C 0 I 541 s canFam3.chr1 56163791 25 + 122678785 TAATTGCCAT--GAATGCAA-----AA-TTTTG----------- i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 549795 31 + 760995 TAATTGCCATGAAAACAAACCC-AGGA-TTTTG----------- i dasNov3.JH569188 C 0 C 0 e nomLeu3.chr3 156292508 0 + 157873769 C e manLeu1.NW_012106474v1 8206260 238 - 10857215 I a score=1027792.000000 s hg38.chr6_KB021644v2_alt 94077 124 + 185823 AATAATGTACCC------AAG-------AATCTGTTAAAAGTTGCCTTCCTACAACTCTAA--------GGAAGAGAAGGTTTTC-----CATATCTGGGTTTCTAAGAACT--AAAT-AATTACCTGGAAATTTTGGTTGAAGA-TAAGCGCC s panTro5.chr6 173545635 124 + 175400573 AATAATGTACCC------AAG-------AATCTGTTAAAAGTTGCCTTCCTACAACTCTAA--------GGAAGAGAAGGTTTTC-----CATATCTGGGTTTCTAAGAACT--AAAT-AATTACCTGGAAATTCTGGTTGAAGA-TAAGCGCC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171784207 124 + 173848474 AATAATGTACCC------AAG-------AATCTGTTAAAAGTTGCCTTCCTACAACTCTAA--------GGAAGAGAAGGTTTTC-----CATATCTGGGTTTCTAAGAACT--AAAT-AATTACCTGGAAATTCTGGTTGAAGA-TAAGCGCC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11466448 124 - 12463322 AATAATGTACCC------AAG-------AATCTGTTAAAAGTTGCCTTCCTACAACTCTAA--------AGAAGAGAAGGTTTTC-----CATATCTGGGTTTCTAAGAACT--AAAT-AATTACCTGGAAATTTTGGTTGAAGA-TAAGCGCC i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170320217 124 + 172585720 AATAATGTACCC------AAG-------AATCTCTTAAAAGTTGCCTTCCTACAACTCTAA--------GAAAGAGAAGGTTTTC-----CATATCTGGGTTTCTAAGAACT--AAAT-TATTACCTGGGAATTTCGGTTGAAGA-TAAGCGCC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169065778 124 - 170955103 AATAATGTACCC------AAG-------AATCTCTTAAAAGTTGCCTTCCTACAACTCTAA--------GAAAGAGAAGGTTTTC-----CATATCTGGGTTTCTAAGAACT--AAAT-TATTACCTGGGAATTTCGGTTGAAGA-TAAGCGCC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8352219 124 + 10161646 AATAATGTACCC------AAG-------AATCTCTTAAAAGTTGCCTTCCTACAACTCTAA--------GAAAGAGAAGGTTTTC-----CATATCTGGGTTTCTAAGAACT--AAAT-TATTACCTGGGAATTTCGGTTGAAGA-TAAGCGCC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1383089 124 + 3144229 AATAATGTACCC------AAG-------AATCTCTTAAACGTTGCCTTCCTACAACTCTAA--------GAAAGAGAAGGTTTTC-----CATATCTGGGTTTCTAAGAACT--CAAT-AATTACCTGGGAATTTCGGTTGAAGA-TAAGCACC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96661362 124 + 98384682 AATAATGTACCC------AAG-------AATCTCTTAAAAATTGCCTTCCTACAACTCTAA--------GGAAGAGAAGGTTTTC-----CATATCTGGGTTTCTAAGAACT--CAAT-AATTACCTGGGAATTTCGGTTGAAGA-TAAGCGCC i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15600217 124 - 23502949 AATAATGTACCC------AAG-------AATCTCTTAAAAGTTGCCTTCCTACAACCGTAT--------GGAAGAGAAGGTTTTC-----CGTATCTGGCTTTCTAAGAACT--AAAT-AATTACCTGGGAATTTCGGTTGAAGA-TAAGCACC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169870147 124 + 171630274 AATAATGTTCCC------AAG-------AACCTCTTAAAAGTTGCTGTCGTACGACTGTAA--------GGAAGGGAGGGTTTTC-----CATATCTGAGTTTCTAAGAACA--GAAT-AATTACCTGGGAATTTTGGTTGAAGA-TAAGTACC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1283104 124 - 2905041 AATAATGTTCCC------AAG-------AATCTCTTAAAAGTTGCTGTCCTACAACTCTAA--------GGAAGAGAAGGTTTCT-----CATATCTGGGTTTCTAAGAACA--GAAT-AATTACCTGGGAATTTTGGTTGAAGA-TGAGTACC i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1239945 96 - 2164891 AATAATGTTCCC------AAG-------AATCTCTTAAAAGTTGCTGTCCTACAACTCTAA--------GGAAGAGAAGGTTTTT------------------------------------TTACCTGGGAATTTTGGTTCAAGG-TAAGTACC i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1492414 124 - 1813869 AATAATGTTCCC------AAG-------AATCTCTTAAAAGCTGCTGTCCTACAACTCTAA--------GGAAGAGAAGGTTTTC-----CATATCTGGGTTTCTAAGAACA--GAAT-AATTACCTCAGAATTTTGGTTGAAGA-TAAGTACC i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10943252 121 - 12073884 AGCAATGTACCAAGGGAGAAG-------CATCTC-TAAAAGGTGCCTTTTTACAACTGCAG--------GGAGGGAAAGTTTACTATGTACGTATCTAGGTTCCTAAGAACT--GAGT-GAACA---GGAAATTCTGGTTGAA----------- i otoGar3.GL873575 I 541 C 0 s canFam3.chr1 56163816 132 + 122678785 AGTGATTCACCC------AGGAGCTGAAAACCTCATAAAAGTTGCCTTTCTCCATCTGTGA--------G-AAGAGAGAGCTTTC-----CATCTCCAAGTCTCTAAGAACTGAGAAC-AGTTCTCCGGGAATGCTGGTCAAAGG-GAAGGGCC i canFam3.chr1 C 0 I 43 s dasNov3.JH569188 549826 139 + 760995 AACAGTATACCA------AGGAGTTAGGAGTCTCTTAAAATTTGCCTTTCTAAA--CCTAACCATTGTTGGGAGAGAAAGTTTCC-----TATATCAAGGTTTATAAGAGCT--ATGTAAATTCTCTGGGGATTCTGGTTGAGGGTTAAGTACC i dasNov3.JH569188 C 0 C 0 e nomLeu3.chr3 156292508 0 + 157873769 C e manLeu1.NW_012106474v1 8206260 238 - 10857215 I a score=203798.000000 s hg38.chr6_KB021644v2_alt 94201 28 + 185823 TTGTCTTACAAATGAGAAGGA-------------------------------AA-AGAGA s panTro5.chr6 173545759 28 + 175400573 TTGTCTTACAAATGAGAAGGA-------------------------------AA-AGAGA i panTro5.chr6 C 0 I 4 s panPan2.chr6 171784331 28 + 173848474 TTGTCTTACAAATGAGAAGGA-------------------------------AA-AGAGA i panPan2.chr6 C 0 I 4 s gorGor5.CYUI01015032v1 11466572 28 - 12463322 TTGTCTTACAAATGAGAAGGA-------------------------------AA-AGAGA i gorGor5.CYUI01015032v1 C 0 I 4 s rheMac8.chr4 170320341 28 + 172585720 CTGTCTTACGAATGAGAAAGA-------------------------------AA-AGAGA i rheMac8.chr4 C 0 I 10 s macFas5.chr4 169065902 28 - 170955103 CTGTCTTACGAATGAGAAAGA-------------------------------AA-AGAGA i macFas5.chr4 C 0 I 10 s macNem1.NW_012011000v1 8352343 28 + 10161646 CTGTCTTACGAATGAGAAAGA-------------------------------AA-AGAGA i macNem1.NW_012011000v1 C 0 I 10 s cerAty1.NW_012002071v1 1383213 29 + 3144229 CTGTCTTACGAATgagaaaaa-------------------------------aagagaga i cerAty1.NW_012002071v1 C 0 I 10 s chlSab2.chr13 96661486 28 + 98384682 CTTTCTTACGAATGAGAAAGA-------------------------------AA-AGAGA i chlSab2.chr13 C 0 I 10 s colAng1.NW_012114488v1 15600341 28 - 23502949 CTGTCTTACAAATGAGAAAGA-------------------------------AA-AGAGA i colAng1.NW_012114488v1 C 0 I 6 s calJac3.chr4 169870271 59 + 171630274 TTGTTTTACAAATGAGAAGGAagagagaggagagagggggagaggaagagagag-agaga i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1283228 28 - 2905041 TTGTTTTACAAATGAGAAGGA-------------------------------AG-AGAGA i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1240041 28 - 2164891 TTGTTTTACAAATGAGAAGGA-------------------------------AG-GGAGA i cebCap1.NW_016107695v1 C 0 I 10 s aotNan1.NW_018494782v1 1492538 28 - 1813869 TTGTTTTACAAATgagaagga-------------------------------ag-agaga i aotNan1.NW_018494782v1 C 0 I 22 s otoGar3.GL873575 10943373 38 - 12073884 -----TTATAAATGAGATGGG----------------GACGGAGAAGGGGAGAT-AGAGA i otoGar3.GL873575 C 0 C 0 s dasNov3.JH569188 549965 28 + 760995 CTTTCTCACAagtgagagaga-------------------------------ga-gaaaa i dasNov3.JH569188 C 0 C 0 e canFam3.chr1 56163948 43 + 122678785 I e nomLeu3.chr3 156292508 0 + 157873769 C e manLeu1.NW_012106474v1 8206260 238 - 10857215 I a score=-55.000000 s hg38.chr6_KB021644v2_alt 94229 1 + 185823 -T s panTro5.chr6 173545791 1 + 175400573 -T i panTro5.chr6 I 4 C 0 s panPan2.chr6 171784363 1 + 173848474 -T i panPan2.chr6 I 4 C 0 s gorGor5.CYUI01015032v1 11466604 1 - 12463322 -T i gorGor5.CYUI01015032v1 I 4 C 0 s rheMac8.chr4 170320379 1 + 172585720 -T i rheMac8.chr4 I 10 C 0 s macFas5.chr4 169065940 1 - 170955103 -T i macFas5.chr4 I 10 C 0 s macNem1.NW_012011000v1 8352381 1 + 10161646 -T i macNem1.NW_012011000v1 I 10 C 0 s cerAty1.NW_012002071v1 1383252 1 + 3144229 -T i cerAty1.NW_012002071v1 I 10 C 0 s chlSab2.chr13 96661524 1 + 98384682 -T i chlSab2.chr13 I 10 C 0 s colAng1.NW_012114488v1 15600375 1 - 23502949 -T i colAng1.NW_012114488v1 I 6 C 0 s otoGar3.GL873575 10943411 1 - 12073884 -T i otoGar3.GL873575 C 0 C 0 s dasNov3.JH569188 549993 1 + 760995 a- i dasNov3.JH569188 C 0 C 0 e saiBol1.JH378287 1283256 0 - 2905041 C e aotNan1.NW_018494782v1 1492566 22 - 1813869 I e cebCap1.NW_016107695v1 1240069 10 - 2164891 I e calJac3.chr4 169870330 0 + 171630274 C e canFam3.chr1 56163948 43 + 122678785 I e nomLeu3.chr3 156292508 0 + 157873769 C e manLeu1.NW_012106474v1 8206260 238 - 10857215 I a score=-3718.000000 s hg38.chr6_KB021644v2_alt 94230 11 + 185823 --------------------------------------GTTAC-------------------------------------CTAAAT s panTro5.chr6 173545792 11 + 175400573 --------------------------------------GTTAC-------------------------------------CTAAAT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171784364 11 + 173848474 --------------------------------------GTTAC-------------------------------------CTAAAT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11466605 11 - 12463322 --------------------------------------GTTAC-------------------------------------CTAAAT i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170320380 11 + 172585720 --------------------------------------GTTAT-------------------------------------TTAAAT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169065941 11 - 170955103 --------------------------------------GTTAT-------------------------------------TTAAAT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8352382 11 + 10161646 --------------------------------------GTTAT-------------------------------------TTAAAT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1383253 11 + 3144229 --------------------------------------GTTAT-------------------------------------TTAAAT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96661525 11 + 98384682 --------------------------------------GTTAT-------------------------------------TTAAAT i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15600376 11 - 23502949 --------------------------------------GTTAT-------------------------------------TTAAAC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169870330 5 + 171630274 ---------------------------------------------------------------------------------gagag i calJac3.chr4 C 0 I 2 s saiBol1.JH378287 1283256 5 - 2905041 ---------------------------------------------------------------------------------GAGAG i saiBol1.JH378287 C 0 I 2 s otoGar3.GL873575 10943412 11 - 12073884 --------------------------------------ATCAC-------------------------------------TTAAAT i otoGar3.GL873575 C 0 C 0 s dasNov3.JH569188 549994 86 + 760995 gcgagaagtagaggaaggtgagagagagagCAAGCTGCATTACAAAGCATTGGGATCATAGATGAAGAAGTGCATATAGGTTAAAT i dasNov3.JH569188 C 0 C 0 e aotNan1.NW_018494782v1 1492566 22 - 1813869 I e cebCap1.NW_016107695v1 1240069 10 - 2164891 I e canFam3.chr1 56163948 43 + 122678785 I e nomLeu3.chr3 156292508 0 + 157873769 C e manLeu1.NW_012106474v1 8206260 238 - 10857215 I a score=-345.000000 s hg38.chr6_KB021644v2_alt 94241 3 + 185823 ATC s panTro5.chr6 173545803 3 + 175400573 ATC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171784375 3 + 173848474 ATC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11466616 3 - 12463322 ATC i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170320391 3 + 172585720 ATC i rheMac8.chr4 C 0 I 7 s macFas5.chr4 169065952 3 - 170955103 ATC i macFas5.chr4 C 0 I 7 s macNem1.NW_012011000v1 8352393 3 + 10161646 ATC i macNem1.NW_012011000v1 C 0 I 7 s cerAty1.NW_012002071v1 1383264 3 + 3144229 ATC i cerAty1.NW_012002071v1 C 0 I 7 s chlSab2.chr13 96661536 3 + 98384682 ATC i chlSab2.chr13 C 0 I 7 s colAng1.NW_012114488v1 15600387 3 - 23502949 ATC i colAng1.NW_012114488v1 C 0 I 7 s calJac3.chr4 169870337 1 + 171630274 G-- i calJac3.chr4 I 2 C 0 s saiBol1.JH378287 1283263 1 - 2905041 G-- i saiBol1.JH378287 I 2 C 0 s aotNan1.NW_018494782v1 1492588 1 - 1813869 A-- i aotNan1.NW_018494782v1 I 22 C 0 s otoGar3.GL873575 10943423 3 - 12073884 ACC i otoGar3.GL873575 C 0 C 0 s dasNov3.JH569188 550080 3 + 760995 ATT i dasNov3.JH569188 C 0 I 11 e cebCap1.NW_016107695v1 1240069 10 - 2164891 I e canFam3.chr1 56163948 43 + 122678785 I e nomLeu3.chr3 156292508 0 + 157873769 C e manLeu1.NW_012106474v1 8206260 238 - 10857215 I a score=21840.000000 s hg38.chr6_KB021644v2_alt 94244 2 + 185823 TT s panTro5.chr6 173545806 2 + 175400573 TT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171784378 2 + 173848474 TT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11466619 2 - 12463322 TT i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170320401 2 + 172585720 TT i rheMac8.chr4 I 7 C 0 s macFas5.chr4 169065962 2 - 170955103 TT i macFas5.chr4 I 7 C 0 s macNem1.NW_012011000v1 8352403 2 + 10161646 TT i macNem1.NW_012011000v1 I 7 C 0 s cerAty1.NW_012002071v1 1383274 2 + 3144229 TT i cerAty1.NW_012002071v1 I 7 C 0 s chlSab2.chr13 96661546 2 + 98384682 TT i chlSab2.chr13 I 7 C 0 s manLeu1.NW_012106474v1 8206498 2 - 10857215 TT i manLeu1.NW_012106474v1 I 238 C 0 s colAng1.NW_012114488v1 15600397 2 - 23502949 TT i colAng1.NW_012114488v1 I 7 C 0 s calJac3.chr4 169870338 2 + 171630274 TT i calJac3.chr4 C 0 I 2 s saiBol1.JH378287 1283264 2 - 2905041 TT i saiBol1.JH378287 C 0 I 2 s aotNan1.NW_018494782v1 1492589 2 - 1813869 TT i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10943426 2 - 12073884 TT i otoGar3.GL873575 C 0 I 7 s dasNov3.JH569188 550094 2 + 760995 TT i dasNov3.JH569188 I 11 C 0 e cebCap1.NW_016107695v1 1240069 10 - 2164891 I e canFam3.chr1 56163948 43 + 122678785 I e nomLeu3.chr3 156292508 0 + 157873769 C a score=2137832.000000 s hg38.chr6_KB021644v2_alt 94246 247 + 185823 AAATAT------AATATATTAAAAAATAGAAGCTGTGTAT-ACAAAAGTTTTAAGTCAAGCAGATATTTGACACTTCTCTTGTGA-A-TTTTTTGCTTTAGGCAACCTAACTGGAAAATTTCTGAAGGAAAACATGAATTTTGGT-GAAAAATTATCTGATTATTCCACCCCTATTAATCCAATTAATCAAAACATTGAAGAAGAAAATTGTCCTCACGTTCCACTGGGTTGACAGCCTAGATGGTG-GTATTCTGtg s panTro5.chr6 173545808 247 + 175400573 AAATAT------AATATATTAAAAAATAGAAGCTGTGTAT-ACAAAAGTTTTAAGTCAAGCAGATATTTGACACTTCTCTTGTGA-A-TTTTTTGCTTTAGGCAAACTAACTGGAAAATTTCTGAAGGAAAACATGAATTTTGGT-TAAAAATTATCTGATTATTCCACCCCTATTAATCCAATTAATCAAAACATTGAAGAAGAAAATTTTCCTCACGTTCCACTGGGTTGACAGCCTAGATGGTG-GTATTCTGtg i panTro5.chr6 C 0 C 0 s panPan2.chr6 171784380 247 + 173848474 AAATAT------AATATATTAAAAAATAGAAGCTGTGTAT-ACAAAAGTTTTAAGTCAAGCAGATATTTGACACTTCTCTTGTGA-A-TTTTTTGCTTTAGGCAAACTAACTGGAAAATTTCTGAAGGAAAACATGAATTTTGGT-TAAAAATTATCTGATTATTCCACCCCTATTAATCCAATTAATCAAAACACTGAAGAAGAAAATTTTCCTCACGTTCCACTGGGTTGACAGCCTAGATGGTG-GTATTCTGtg i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11466621 244 - 12463322 AAATAT------ATTA---TTAAAAATAGAAGCTGTGTAT-ACAAAAGTTTTAAGTCAAGCAGATATTTGACACTTCTCTTGTGA-A-TTTTTTGCTTTAGGCAACCTAACTGGAAAATTTCTGAAGGAAAACATGAATTTTGGT-TAAAAATTATCTGATTATTCCACCCCTATTAATCCAATTAATCAAAACATTGAAGAAGAAAATTGTCCTCACGTTCCACTGGGTTGACAGCCTAGATGGTG-GTATTCTGtg i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170320403 247 + 172585720 AAATAT------AATGTATTAAAAAATAGAAGCTGGGTAT-ACAAAAGTTTTAAGTCAAGCAGATATTTGACACTTCTCTTGTGA-A-TTTTTTGCTTTAGGCAACCTCAATGGAAAACTTCTGAAGGAAAACATGAATTTTGGT-TAAAAATTATCTGATTATTCTACCCCTATTAATCCAATTAATCAAAAAATTGAAGGAGAAAATTTTCCCCACGTTCCACTGGATTCACAGCCCAGACGGTG-GTATTCTGtg i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169065964 247 - 170955103 AAATAT------AATGTATTAAAAAATAGAAGCTGGGTAT-ACAAAAGTTTTAAGTCAAGCAGATATTTGACACTTCTCTTGTGA-A-TTTTTTGCTTTAGGCAACCTAAATGGAAAACTTCTGAAGGAAAACATGAATTTTGGT-TAAAAATTATCTGATTATTCTACCCCTATTAATCCAATTAATCAAAAAATTGAAGGAGAAAATTTTCCCCACGTTCCACTGGATTCACAGCCTAGACGGTG-GTATTCTGtg i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8352405 247 + 10161646 AAATAT------AATGTATTAAAAAATAGAAGCTGGGTAT-ACAAAAGTTTTAAGTCAAGCAGATATTTGACACTTCTCTTGTGA-A-TTTTTTGCTTTAGGCAACCTAAATGGAAAACTTCTGAAGGAAAACATGAATTTTGGT-TAAAAATTATCTGATTATTCTACCCCTATTAATCCAATTAATCAAAAAATTGAAGGAGAAAATTTTCCCCACGTTCCACTGGATTCACAGCCCAGACGGTG-GTATTCTGtg i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1383276 247 + 3144229 AAATAT------AATGTATTAAAAAATAGAAGCTGGGTAT-ACAAAAGTTTTAAGTCAAGCAGATATTTGACACTTCTCTTGTGA-A-TTTTTTGCTTTAGGCAACCAAAATGGAAAACTTCTGAAGGAAAACATGAATTTTGGT-TAAAAATTATCTGATTATTCTACCCCTATTAATCCAATTAATCAAAAAATTGAAGGAGAAAATTTTCCCCAGGTTCCACTGGGTTGACAGCCCAGACGGTG-GTATTCTGTG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96661548 248 + 98384682 AAATAT------AATGTATTAAAAAATAGAAGCTGGGTAT-ATGAAAGTTTTAAGTCAAGCAGATATTTGACACTTCTCTTGTGA-ATTTTTTTGCTTTAGGCAACCTAAATGGAAAACTTCTGAAGGAAAACATGAATTTTGGT-TAAAAATTATCTGATTATTCTACCCCTATTAATCCAATTAATCAAAAAATTGAAGGAGAAAATTTTCCCCACGTTCCACTGGATTCACAGCCCAGACGGTG-GTGTTCTGCG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8206500 247 - 10857215 AAATAC------AATGTATTAAAAAATAGAAGCTGGGTAT-ACAAAAGTTTTAAGTCAAGCAGATATTTGACATTTCTCTTGTGA-A-TTTTTTGCTTTAGGCAACCAAAATGGAAAACTTCTGAAGGAAAACATGAATTTTGGT-TAAAAATTATCTGATTATTCTACCCCTATTAATCCAATTAATCAAAAAATTGAAGGAGAAAATTTTCCCCACCTTCCACTGAGTTGACAGCCCAGACGGTG-GTATTCTGtg i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15600399 247 - 23502949 AAATAT------AATATATTAAAAAATAGAAGCTGGGTAT-ACAAAAGTTTTAAGTCAAGCAGATATTTGTCACCTCTCTTGTGA-A-TTTTTTGCTTTAGGCAACCTAAATGGAAAACTTCTGAAGGAAAACATGAATTTTGGT-TAAAAATTATCTGATTATTCTGCCCCTATTCATCCAATTCATCAAAAAATTGAAGGAGAAAATTTTCCCCACGTTCCACTGGGTTGACAGCCCAGACGGTG-GTATTCTGtg i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169870342 244 + 171630274 AAATTA------AACATACTAAAAAGTAGGAGCTGAGTGT-ACGGAAGTTTTCAGTCAAGTAGATATTTGACATTTCTCTTGTGA-A-TTGTTTGCTTTAGGCAACAAAAGTGGAAAATATCTGAAGGAAAACATAAATTTTGTT-TAAAAGTTATCTGATTATTCTACCTCTATTAATGCAACTAATCACAAAGTTGAAAAAGGACACT-TGCCCACGT-CCACTGG-CTGACGGCCTAAATGGTG-GTATCCTGTG i calJac3.chr4 I 2 C 0 s saiBol1.JH378287 1283268 246 - 2905041 ATATTAAACGTTAACACATTAAAAAGTAGAAGCTGGGTAT-ACGAAAGTTTTCAGTCAAGTAGATATTTGACATTTCTCTTGTGA-A-TTGTTTGCATTAGGCGACAAAAGTGGAACATTTCTGAA-GAAAACATAAATTTTGTT-TAAAAGTTACCTGATTATTCTACCGCTCTTAATGCAACTAATCACAAAACCGAAAAAGGAAACT-TCCCCAGGT----CTGG-TTGACAGCCTAAATGGTG-GTGTCCTGTG i saiBol1.JH378287 I 2 C 0 s cebCap1.NW_016107695v1 1240079 245 - 2164891 AAATTA------AATATACTAAAAAGTAGAAGTTGGGTAT-ATGAAAGTTTTCGGTCAAGTAGATATTTGACATTTCTCTTGTGA-A-TTGTTTGCGTTAGGCAACAAAAGTGGAAAATTTCCAAAGGAAAACATAAATTTTGTT-TAAAAGTTATCTGATTATTCTACCTCTATTAATGCAACTAATCACAAAATTGAAAAGGGAAGCT-TCCCCATGTCCCACTGG-CTGACAGCCTCAATGGTG-GTATCCTATA i cebCap1.NW_016107695v1 I 10 C 0 s aotNan1.NW_018494782v1 1492591 243 - 1813869 AAATAT------AATATATTAAAAAGTAGAAGCTGGGTAT-ACGAAAGTTTTCAGTCAAGTAAATATTTGACATTTCTCTTGTGA-A-TTGTTTGCTTTAGGCAACAAAAGTGGAAAATTTCTGAAGGAAAACATAAATTTCATT-TAAAAGTTATCTGATTATTTTACCTGTATGAATGCAACTAATCACAAAATTGAAAAAGGAAACT-TCCCCAGGTCCCACCGG-TTGACA--CGAAATGGTG-GCATCCTGTA i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10943435 225 - 12073884 ACATAT------GATGTATTAAAAA-TAGAAGCTCAGTATAAAAAAAGGTTTATGTCAAGGGGATAATTGCCATTTCTCCTGTGA-A-ATTTTGGCTTTAGGCAACCTAAATG---AATTCATGAAGGAAAACATGAATACTATTGTTAAAATTACTTGAATAGTCTGGGTATAGGAATC-----AATCA---------------GAATTCCTTCAGTGTGGCATTGGGCAGGCAGACTAAATGGTG-GTACTTTGTG i otoGar3.GL873575 I 7 I 1081 s dasNov3.JH569188 550096 242 + 760995 AAGTAA------ATCATATTAAAAA-TAGAAGCTTTGCGT-AC-AAAGCTTTATGTCAAGGGATTATTTGGCATTTCTCTGGTGAGA-AGTATTGCTTTAGACAGTTTAACTGAATAACTCATGAAGGAAAAATGAACTTTTGTG-TTAGAACTATCTGATTAGTATGCTGAAATTAATCAAATTAATTATACATTTGA-----GAAACATTTCCAGGGTTGTACTAAGTAAACAGCCTAAATTTTGTGTATAGTGGG i dasNov3.JH569188 C 0 C 0 e canFam3.chr1 56163948 43 + 122678785 I e nomLeu3.chr3 156292508 0 + 157873769 C a score=22590.000000 s hg38.chr6_KB021644v2_alt 94493 4 + 185823 tga----c s panTro5.chr6 173546055 4 + 175400573 tga----g i panTro5.chr6 C 0 C 0 s panPan2.chr6 171784627 4 + 173848474 tga----g i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11466865 4 - 12463322 tga----c i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170320650 4 + 172585720 tga----g i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169066211 4 - 170955103 tga----g i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8352652 4 + 10161646 tga----g i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1383523 4 + 3144229 TGA----C i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96661796 4 + 98384682 TGA----C i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8206747 4 - 10857215 tga----c i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15600646 4 - 23502949 tga----c i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169870586 8 + 171630274 TGACCACC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1283514 4 - 2905041 TGA----C i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1240324 4 - 2164891 TGA----C i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1492834 4 - 1813869 TGA----C i aotNan1.NW_018494782v1 C 0 C 0 s dasNov3.JH569188 550338 4 + 760995 GGA----C i dasNov3.JH569188 C 0 I 1 e otoGar3.GL873575 10943660 1081 - 12073884 I e canFam3.chr1 56163948 43 + 122678785 I e nomLeu3.chr3 156292508 0 + 157873769 C a score=3199894.000000 s hg38.chr6_KB021644v2_alt 94497 434 + 185823 gtc------aagtttagcctaaagctgcctccttacatattttagggtcagcctgaagacctctccacacttagtgactgtcacctaactgggcgtgccaacagacctaacccacccttgccccaagcagccgcatctcagcggatcacagcagccaggcgtcaccatgcaccgtgg-cccggttcaaactgtgtttaaatgaggcccacgccaagcggtgcccg-tctggctgtttctgtgcctccgtccagttttcttg-gcatcactgtcctttctctgtccacaaatctaaccggaccacgcgacagcgacggagccgccctgagcctatgctgggtccagggctgccccattcaccaacagtca-tttgctcaatgaagctctgtgacattcagtttgtctgaagtttgtcttttaacaTTGGTGATAGAGTGAGAAGT s panTro5.chr6 173546059 434 + 175400573 gtc------aagtttagcctaaagctgcctccttacatattttagggtcagcctgaagacctctccacacttagtgactgtcacctaactgagcgtatcaacagacttaacccacccttgccccaagcagccgcatctcagcggatcacagcagccaggcgtcaccatgcaccgtgg-cccggttcaaactgtgtttaaatgaggcccacgccaagcggtgcccg-tctggctgtttctgtgcctccgtccagttttcctg-gcatcgctgtcctttctctgtccacaaatcttaccggaccacgcgacagtgacggagccgccctgagcctatgctgggtccagggctgccccattcaccaatagtca-tttgctcaatgaagctctgtgacattcagtttgtctgaagtttgtcttttaacaTTGGTGATAGAGTGAGAAGT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171784631 435 + 173848474 gtc------aagtttagcctaaagctgcctccttacatattttagggtcagcctgaagacctctccacacttagtgactgtcacctaactgagcgtatcaacagacttaacccacccttgccccaagcagccgcatctcagcggatcacagcagccaggcgtcaccatgcaccgtgg-cccggttcaaactgtgtttaaatgaggcccacgccaagcggtgcccg-tctggctgtttctgtgcctccgtccagttttcctg-gcatcgctgtcctttctctgtccacaaatcttaccggaccacgcgacagcgacggagccgccctgagcctatgctgggtccagggctgccccattcaccaatagtcattttgctcaatgaagctctgtgacattcagtttgtctgaagtttgtcttttaacaTTGGTGATAGAGTGAGAAGT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11466869 432 - 12463322 gtc------aagtttagcctaaagctgcctccttacatattttagggtcagcctgaagacctctccacacttagtgactgtcacctaactgggcgtgtcaacagacttaacccacccttgccccaagcagccgcatctcagcggatcacagcagccaggcgtcaccatgcaccgtgg-cccggttcaaactgtgtttaaatgaggcccacgcgaagcggtgcccg-tctggctgtttctatg-ctccgtccagttttcctg-gcatcactgtcctttctctgtccacaaatcttaccggagcacgcgaca-cgacggagccgccctgagcctatgctgggtccagggctgccccattcaccaatagtca-tttgctcaatgaagctctgtgacattcagtttgtctgaagtttgtcttttaacaTTGGTGATAGAGTGAGAAGT i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170320654 434 + 172585720 gtt------aagtttagccgaaagctgcctccttatatattttagggtcagcctgaaggcctctccacacttagtgactgtcacctaactgggtgtgtgaacacacttaacccacccttgccccaaacagcagcatctcagcggatcacagcagcggggagtcaccatgcaccgtggccccggttcacatcatgtggaagtggggcccacgccaagcggtgcccc-tctggctgtttctgcgcctctgtccagttttc-tg-ccatcactgtcctttctctgtccacaaatcttaccggaccacgtggcagcgacggagtcaccctgaacctatgctgggtccagggctgcccggttcacgaatagtta-tttgctcagtgaagctctgtgacattcggtttgtctgacgtttgtcttttaacaTCGGTGATAGAGAGAGAAGT i rheMac8.chr4 C 0 I 1 s macFas5.chr4 169066215 434 - 170955103 gtt------aagtttagccgaaagctgcctccttatatattttagggtcagcctgaaggcctctccacacttagtgactgtcacctaactgggtgtgtgaacacacttaacccacccttgccccaaacagcagcatctcagcggatcagagcagcggggagtcaccatgcaccgtggccccggttcacatcatgtggaagtggggcccacgccaagcggtgcccc-tctggctgtttctgcgcctctgtccagttttc-tg-ccatcactgtcctttctctgtccacaaatcttaccggaccacgtggcagcgacggagtcaccctgaacctatgctgggtccagggctgcccggttcacgaatagtta-tttgctcagtgaagctctgtgacattcggtttgtctgacgtttgtcttttaacaTCGGTGATAGAGAGAGAAGT i macFas5.chr4 C 0 I 1 s macNem1.NW_012011000v1 8352656 434 + 10161646 gtt------aaatttagccgaaagctgcctccttgtatattttagggtcagcctgaagacctctccacacttagtgactgtcacctaactgggtgtgtgaacacacttaacccacccttgccccaaacagcagcatctcagcggatcacagcagcggggagtcaccatgcactgtggccccggttcacatcatgtggaagtggggcccacgccaagcggtgcccc-tctggctgtttctgtgcctctgtccagttttc-tg-ccatcactgtcctttctctgtccacaaatcttaccggaccacgtgccagtgacggagtcaccctgaacctatgctgggtccagggctgcccggttcacgaatagtta-tttgctcagtgaagctctgtgacattcggtttgtctgacgtttgtcttttaacaTCGGTGATAGAGAGAGAAGT i macNem1.NW_012011000v1 C 0 I 1 s cerAty1.NW_012002071v1 1383527 434 + 3144229 Gtt------aggtttagccgaaagctgcctccttacatattttagggtcagcctgaaggcctctccacacttagtgactgtcacctaacggggtgtgtgaacacacttaacccacccttgccccaaacagccgcatctcagcggatcacagcagcggggagtcaccacacaccgtggccctggttcacatcatgtggaagtggggcccacgccaagcggtgcccc-tctggctgtttctgcgcctctgtccagttttc-tg-ccatcactgtcctttctctgtccacaaatcttaccggaccacgtggcagcgacggagtcaccctgaacctatgctgggtccagggctgccccgttcatgaatagtta-tttgctcagtgaagctctgtgacattcggtttgtctgacgtttgtcttttaacaTCGGTGATAGAGTGAGAAGT i cerAty1.NW_012002071v1 C 0 I 1 s chlSab2.chr13 96661800 435 + 98384682 Gtt------aagtttagccgaaagctgcctccttacatattttagggtcagcctgaaggcctctccacacttagtgactgttacctaactgggtgtgtgaacacacttaacccacccttgccccaagcagccgcatctcagcggatcacagcagcgaggagtcaccatgcaccgtggccccggttcacatcatgtggaagtggggcccatgccaagtggtgccccgtctggctgtttctgcgcctctgtccagttttc-tg-ccatcactgtcctttctctgtccacaaatcttaccggaccacgtggcagtgacagagtcaccctgaacctatgctgggcccagggctgccccgttcacgaatagtta-tttgctcagtgaagctctgtgacattcggtttgtctgacatttgtcttttaacaTTGGTGATAGAGTGAGAAGT i chlSab2.chr13 C 0 I 1 s manLeu1.NW_012106474v1 8206751 433 - 10857215 gtt------aggtttagccgaaagctgcctccttacatattttagggtcagcctgaaggcctctccacacttagtgactgtcacctaaccgggtgtgtgaacacacttaacccacccttgccccaagcagccgcatctcagcggatcacagcag-gaggagtcaccacacaccgtggccccggttcacatcatgtggaagtggggcccacgccaagcggtgcccc-tctggctgtttctgcgtctctgtccagttttc-tg-ccatcactgtcctttctctgtccacaaatcttaccggaccacgtggcagcgacggagtcaccctgaacctatgctgggtccagggctgcccagttcatgaatagtta-tttgctcagtgaagctctgtgacattcggtttgtctgacgtttgtcttttaataTCCGTGATAGAGAGAGAAGT i manLeu1.NW_012106474v1 C 0 I 1 s colAng1.NW_012114488v1 15600650 419 - 23502949 gtt------aggtttagccgaaagctgcctccttacatattttagggtcagcctgaagacctctccacacttagtgactgtcacctgactgggtgtgtgaacacacttgacccacccttgctccaagcagccgcatctcagcggatcgcagcagcgggga---------------ggtctcggttcacatcgcgtggaagtggggcccacgcccagcggtgcccg-tctggctgtttctgtgcctctgtccagttttc-tg-ccatcactgtcctttctctgtccacaaatcttaccggaccacgtggcagcgacggagtcgccctgaacctatgctgggcccagggctgcccggttcactaacagtta-tttgctcagtgaggctctgtgacactcggttcgtctcaagtttgtcttttcacaTCGGTGATAGGGTGAGAAGT i colAng1.NW_012114488v1 C 0 I 1 s calJac3.chr4 169870594 431 + 171630274 GTTTATAGGCCgttcagcct-cagctgcctcctgacacatttcggggccgacctgaaggcctctccacacgcagggactgtggcctaaccgggcgtgtgaacag----aacccacccttg-ccctagcagctgaatctcagcggatcacagcagccagtggtcaccacgcaccgtgg-cctggttcacaccatgtttcaatgaggcccacaccacgcagtgcctg-tccggctgcttctgtgcctccatacagttttc-tgtgcatcactgtcctttctctatccacaaatctgactggaccacgcagcagccacgaagccaccctgagcctgtgctgggtcct-ggctgccctggtcacaaacattta-tgtgtc--atgaagctctgtggcattcagtttgtctgaagtttgtcttttaccaTTGGTGATAGAGTGAGACAT i calJac3.chr4 C 0 I 1 s saiBol1.JH378287 1283518 414 - 2905041 GTT------CCGTCCAGCAC-TGgctgcctccttacacatttcgggg-cggcctgaaggcctctccacacctagtgactggggcccaaccaggcttgtgaacagactcaacccaccctt--ccccagcagccgcagctcaggggatcacagcagcctgc-gtcaccacgcaccgtgg-cccggttcagaccgtgttccaatgaggcccaggccacgcggtgcccg--ccggctgctcctgtgcccccgtaccgttttc-tgtgcgtcactgtcctttctctgtccacaaatctgactggaccacgcagcagtgacgaagccaccctcagcctgagccgggtcca-ggctgccctggtcacggacattta-tttgtc--acgaagctctgtggcattc-----------agtttgtctTTTACCATGGGTGACAGAGTGAGACGT i saiBol1.JH378287 C 0 I 1 s cebCap1.NW_016107695v1 1240328 425 - 2164891 GTT------CCGTTCAGCCC-TGgccgcctccttacacatttcagggccggcctgaaggcatctgcacatgtagtgactgtggcccaacctggcgtgtga--agacttaacccaccctt--ccccagcagccacatctcagcagatcacagcagccggc-gtcaccatgcaccgtgg-cctggttcaaaccgtgtttcaatgaggcccatgccacgtggtgcccg-gccggctgcttctgtgcccctgtatggttttc-tgtgcatcactgtcctttccctgtccacaaatctgactggaccacgcagcagcgacaaagccaacctcagcctgtgctgggtcca-cgctgccctggtcacaaacattta-tttgtc--atgaagctctgtggcattcagtttgtccgaagtttgtcttttaccaTGGGTGATAGAGTGAGACGT i cebCap1.NW_016107695v1 C 0 I 23 s aotNan1.NW_018494782v1 1492838 418 - 1813869 GTT------CCgttcagccc-tagctgcctccttacacatttcggggccggcctgaaggcctctccacacgtagtgactgtggcctaaccgggtgtgtgaacagactcaacccacccttg-ccccagcagccgcatctcagcggatcacagcagccagcggtcaccacgcaccgtgg-cccggttcaaaccgagtttcaatgaggcccacgccacgcggcgcccg-tccggctgcttctgtgcccccggacagttttc-tgtgtatcactgtcctttctctgtccacaaatctgattggaccacgcagcagtgacgaagccaccctcagcctgtgctgggtcca-ggctgccctggtcacgaacattta-tttgtc--atgcagctctgtggcattc-----------agtttgtctTTTACCATTGATGATAGAGTGAGACGT i aotNan1.NW_018494782v1 C 0 I 1 e otoGar3.GL873575 10943660 1081 - 12073884 I e dasNov3.JH569188 550342 1 + 760995 I e canFam3.chr1 56163948 43 + 122678785 I e nomLeu3.chr3 156292508 0 + 157873769 C a score=176399.000000 s hg38.chr6_KB021644v2_alt 94931 25 + 185823 CTGTGAGGAGAAGGGATATGAGATG s panTro5.chr6 173546493 25 + 175400573 CTGTGAGGAGAAGGGATATGAGATG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171785066 25 + 173848474 ATGTGAGGAGAAGGGATATGAGATG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11467301 25 - 12463322 CTGTGAGGAGAAGGGATATGAGATG i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170321089 25 + 172585720 CTGTGAGGAGAAGGGGTGTGAGATG i rheMac8.chr4 I 1 C 0 s macFas5.chr4 169066650 25 - 170955103 CTGTGAGGAGAAGGGGTGTGAGATG i macFas5.chr4 I 1 C 0 s macNem1.NW_012011000v1 8353091 25 + 10161646 CTGTGAGGAGAAGGGGTGTGAGATG i macNem1.NW_012011000v1 I 1 C 0 s cerAty1.NW_012002071v1 1383962 25 + 3144229 CTGTGAGGAGAAGGGGTGTGAGATG i cerAty1.NW_012002071v1 I 1 C 0 s chlSab2.chr13 96662236 25 + 98384682 CTGTGAGGAGAAGGGCTGTGAGATG i chlSab2.chr13 I 1 C 0 s manLeu1.NW_012106474v1 8207185 25 - 10857215 CTGTGAGGAGAAGGGGTGTGAGATG i manLeu1.NW_012106474v1 I 1 C 0 s colAng1.NW_012114488v1 15601070 25 - 23502949 CTGTGAGGAGAAGGGGTGCGAGATG i colAng1.NW_012114488v1 I 1 C 0 s calJac3.chr4 169871026 22 + 171630274 CAGT---GAGAAGGGGTAGGAGATG i calJac3.chr4 I 1 C 0 s saiBol1.JH378287 1283933 25 - 2905041 CAGTGAGGAGAAGGGGTAGGCGGTG i saiBol1.JH378287 I 1 C 0 s aotNan1.NW_018494782v1 1493257 22 - 1813869 CAGT---GAGAAGGGGTAGGAGATG i aotNan1.NW_018494782v1 I 1 I 20 s dasNov3.JH569188 550343 25 + 760995 CTGAGAGCAGGAAGGATATGGCATG i dasNov3.JH569188 I 1 C 0 e otoGar3.GL873575 10943660 1081 - 12073884 I e cebCap1.NW_016107695v1 1240753 23 - 2164891 I e canFam3.chr1 56163948 43 + 122678785 I e nomLeu3.chr3 156292508 0 + 157873769 C a score=8281.000000 s hg38.chr6_KB021644v2_alt 94956 1 + 185823 T s panTro5.chr6 173546518 1 + 175400573 T i panTro5.chr6 C 0 C 0 s panPan2.chr6 171785091 1 + 173848474 T i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11467326 1 - 12463322 T i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170321114 1 + 172585720 T i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169066675 1 - 170955103 T i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8353116 1 + 10161646 T i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1383987 1 + 3144229 T i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96662261 1 + 98384682 T i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8207210 1 - 10857215 T i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15601095 1 - 23502949 T i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169871048 1 + 171630274 T i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1283958 1 - 2905041 T i saiBol1.JH378287 C 0 C 0 s dasNov3.JH569188 550368 1 + 760995 T i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10943660 1081 - 12073884 I e aotNan1.NW_018494782v1 1493279 20 - 1813869 I e cebCap1.NW_016107695v1 1240753 23 - 2164891 I e canFam3.chr1 56163948 43 + 122678785 I e nomLeu3.chr3 156292508 0 + 157873769 C a score=36911.000000 s hg38.chr6_KB021644v2_alt 94957 14 + 185823 TCCAAAAT------ATTATT s panTro5.chr6 173546519 20 + 175400573 TCCAAAATTACATCAAAATT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171785092 20 + 173848474 TCCAAAATTACATCAAAATT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11467327 20 - 12463322 TCCAAAATTACATCAAAATT i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170321115 9 + 172585720 TCCAAAAT-----------G i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169066676 9 - 170955103 TCCAAAAT-----------G i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8353117 9 + 10161646 TCCAAAAT-----------G i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1383988 9 + 3144229 TCCAAAAT-----------G i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96662262 9 + 98384682 TCCAAAAT-----------G i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8207211 9 - 10857215 TCCAAAAT-----------G i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15601096 9 - 23502949 TCCAAAAT-----------G i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169871049 19 + 171630274 -CCAAAATCACATCAAAATT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1283959 19 - 2905041 -CCGAAATCACATCAACATG i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1240776 20 - 2164891 TCCAAAATCACATCAAAATT i cebCap1.NW_016107695v1 I 23 C 0 s dasNov3.JH569188 550369 9 + 760995 TCCATAGT-----------A i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10943660 1081 - 12073884 I e aotNan1.NW_018494782v1 1493279 20 - 1813869 I e canFam3.chr1 56163948 43 + 122678785 I e nomLeu3.chr3 156292508 0 + 157873769 C a score=745915.000000 s hg38.chr6_KB021644v2_alt 94971 107 + 185823 ACATCACAAGCAAACGGATTTCTGAGTAAGAGG-ATGGTTGGGGCAGGGTCAGGTGGGCCG----CACTGGGTGAGTGTCTGGTgaggatggg-ggaataggtggggcggggg s panTro5.chr6 173546539 107 + 175400573 ACATCACAAGCAAACGGATTTCTGAGTAAGAGG-ATGGTTGGGGCAGGGTCAGGTGGGCCG----CGCTGGGTGAGTGTCTGGTgaggatggg-ggaataggtggggcggggg i panTro5.chr6 C 0 C 0 s panPan2.chr6 171785112 107 + 173848474 ACATCACAAGCAAACGGATTTCTGAGTAAGAGG-ATGGTTGGGGCAGGGTCAGGTGGGCCG----CGCTGGGTGAGTGTCTGGTgaggatggg-ggaataggtggggcggggg i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11467347 107 - 12463322 ACATCACAAGCAAACGGATTTCTGAGTAAGAGG-ATGGTTGGGGCAGGGTCAGGTGGGCCG----CACTGGGTGAGCGTCTGGTGAGGATGGG-GGAATAGGTGGGGCGGGGG i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170321124 107 + 172585720 ACATCAAGAGCAAATGGATTTCTGAGGAAGGGG-ATGGTTGGGGCAGCGTCAGGTGGGCCG----GACTGGGTGAGTGTCCTGTGAGGATGGG-GGGATAGGTGGGGCGTTTT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169066685 107 - 170955103 ACATCAAGAGCAAATGGATTTCTGAGGAAGGGG-ATGGTTGGGGCAGCGTCAGGTGGGCCG----GACTGGGTGAGTGTCCTGTgaggatggg-gggataggtggggcggggg i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8353126 107 + 10161646 ACATCAAGAGCAAATGGATTTCTGAGGAAGGGG-ATGTTTGGGGCAGCGTCAGGTGGGCCG----GACTGGGTGAGTGTCCTGTgaggatggg-gggataggtggggcggggg i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1383997 107 + 3144229 ACATCACCAGCAAATGGATTTCTGAGGAAGGGG-ATGGTTGGGGCAGCGTCAGGTGGGCCG----GACTGGGTGAGAGTCCGGTgaggatggg-ggaataggtggggcggggg i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96662271 107 + 98384682 ACATCACGAGCAAATGGATTGCTGAGGAAGAGG-ATGGTTGGGGCAGCGTCAGGTGGGCCG----GACTGGGTGAGTGTCCGGTgaggatggg-ggaataggaggggcagggg i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8207220 107 - 10857215 ACATCACCAGCAAATGGATTTCTGAGGAAGGGG-ATGGTTGGGGCAGCGTCAGGTGGGCCG----GACTGGGTGAGAGTCCGGTgaggatggg-ggaataggtggggcggggg i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15601105 105 - 23502949 ACATCACGAGCACGTGGAGTGCTGAGGAAGAAG-GTGGCTGGGGCAGGGGCAGGTGCGCCG----GAC-GGGTGAGTGTCCGGTGAGGAT-GG-GGAATAGCTGGGCCGGGGG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169871068 100 + 171630274 ACATCACAAGC------ATTTCTGAGT--GAGGAACAGTAGGGGCAGTATCAGGTGGGACA----GACGGGGTGAGTGCATGATCAGGATGGG-GGAATAGGTGGGGCGGGGG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1283978 99 - 2905041 ACACCGTGAGC------ATTTCTGAGT--GAGG-ACGGTAGAGGCAGTGTCCGGTGGGACC----GACGGGGTGAGTGTGTGATGAGGATGGG-GGAACAGGTGGGGTGGGGG i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1240796 98 - 2164891 ACATCATAAGC------ATTTCTGAGT--GAGG-ACGGTAGAGGCAGTGTCCGGTGGGACG----GACGGGGTGAGTGTGTGATGAGGAT-AG-GGAATAGGTGGCACGGGGG i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1493299 97 - 1813869 ACATCACAAGC------ATTTCTGA----GAGG-ACGGTAGAGGCAGTGTCAGGTGGGACG----GACGGGGTGAGTGTGTGATGGGGATGGG-GGAATAGGTGGGGCGGGGG i aotNan1.NW_018494782v1 I 20 C 0 s dasNov3.JH569188 550378 107 + 760995 ACACCACAtgcagtggtgctccagaat--gtat-tcaccaggtgcagtg---gatgtgccgcgatgatggaagaggttgttgatggggaggggtggggtgggtggagtggggg i dasNov3.JH569188 C 0 I 1447 e otoGar3.GL873575 10943660 1081 - 12073884 I e canFam3.chr1 56163948 43 + 122678785 I e nomLeu3.chr3 156292508 0 + 157873769 C a score=374876.000000 s hg38.chr6_KB021644v2_alt 95078 65 + 185823 cagagaggaggaggcaggatggaggag----agggagaaagaggaag-ggggagccagcagcagggagag s panTro5.chr6 173546646 65 + 175400573 cagagaggaggaggcaggatggaggag----agggagaaagaggaag-ggggagccagcagcagggagag i panTro5.chr6 C 0 C 0 s panPan2.chr6 171785219 65 + 173848474 cagagaggaggaggcaggatggaggag----agggagaaagaggaag-ggggagccagcagcagggagag i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11467454 65 - 12463322 CAGagaggaggaggcaggatggaggag----agggagaaagaggaag-ggggagCCAGCAGCAGGGAGAG i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170321231 65 + 172585720 TCGAgaggaggaggcaggatggaggag----agagagaaagaggaag-gaggagCCTGCTGAAGGGAGAG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169066792 65 - 170955103 ccgagaggaggaggcaggatggaggag----agagagaaagaggaag-gaggagcctgcagaagggagag i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8353233 65 + 10161646 ccgagaggaggaggcaggatggaggag----agagagaaagaggaag-gaggagCCTGCAGAAGGGAGAG i macNem1.NW_012011000v1 C 0 I 812 s cerAty1.NW_012002071v1 1384104 65 + 3144229 cggagaggaggaggcaggatggaggag----agagagaaagaggaag-gaggagcctgcaggagggagag i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96662378 65 + 98384682 cggagaggaggaggcaggagggaggag----agagagaaagaggaag-gaggagCCTGCAGAAGGGAGAG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8207327 65 - 10857215 cggagaggaggaggcaggatggaggag----agagagaaagaggaag-gaggagCCTGCAGAAGGGAGAG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15601210 64 - 23502949 CGGACAGGAGGAGGCAGGAC-CAGGAG----AGAGAGAAAGAGGAAG-GAGGAGCCTGCAGGAGGGAGAG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169871168 40 + 171630274 C------------------------------AGAGAGGAGGAAGAAGAGGGGAGCCAGCAGCAGGGAGAG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1284077 37 - 2905041 C------------------------------AGAGAGGAGGAGGAAGAGGGGAG---ACAGCAGGGAGAG i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1240894 70 - 2164891 CACAgaggaggaggcaggatgggggcgagcgagagaggaggaggaagaggggagccagcagcagggagag i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1493396 40 - 1813869 C------------------------------AGAGAGGAGGCAGGATGGGAGAGAGAGGAGGAGGAAGAG i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10943660 1081 - 12073884 I e dasNov3.JH569188 550485 1447 + 760995 I e canFam3.chr1 56163948 43 + 122678785 I e nomLeu3.chr3 156292508 0 + 157873769 C a score=920829.000000 s hg38.chr6_KB021644v2_alt 95143 155 + 185823 gggagacaggaTTGTATACAGAA-ATGGAACAAAGCCACCAGCTTCTGCACTCTCCAGTGTGCCCAGGACCTGCCCGCTCCGAGTGGACCC-GACAGCACGGGGGTGGCCTGACGCCGGCTGAGATGCAGAATCAGGCCTCTGAGCTACTGAGCTGG s panTro5.chr6 173546711 155 + 175400573 gggagacaggaTTGTATACAGAA-ATGGAACAAAGCCACCCGCTTCCGCACTGTCCACTGTGCCCGGGACCTGCCCGCTCCGAGTGGACCC-GACGGCACGGGGGTGGCCTGACGCCGGCTGAGATGCAGAATCAGGCCTCTGAGCTACTGAGCTGG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171785284 155 + 173848474 gggagacaggaTTGTATACAGAA-ATGGAACAAAGCCACCCGCTTCCGCACTGTCCACTGTGCCCGGGACCTGCCCGCTCCGAGTGGACCC-GACGGCACGGGGGTGGCCTGACGCCGGCTGAGATGCAGAATCAGGCCTCTGAGCTACTGAGCTGG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11467519 155 - 12463322 GGGAGACAGGATTGTATACAGAA-ATGGAACAAAGCCAGCAGCTTCCGCACTCTCCAGTGTGCCCAGGACCTGCGCGCTCCGAGTGGACCC-GACTGCACGGGGGTGGCCTGACGCCGGCTGAGATGCAGAATCAGGCCTCTGAGCTACTGAGCTGG i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170321296 155 + 172585720 GGGAGACGGTGTTGCATACAGAA-ATGGAGCACAGCCACCCGCTTCCACACTCTCCACCGTGCCCAGGACCGGACCGCTCCGAGTGGACCCGGGCAGCACTAGGGTGGCCTGGC-CCGGCTGAGATGCAGAATCAGGCCTCTGAACCACTGAGCTGT i rheMac8.chr4 C 0 I 651 s macFas5.chr4 169066857 155 - 170955103 gggagacggTGTTGCATACAGAA-ATGGAGCACAGCCACCCGCTTCCACACTCTCCACCGTGCCCAGGACCGGACCGCTCCGAGTGGACCCGGGCAGCACTAGGGTGGCCTGGC-CCGGCTGAGATGCAGAATCAGGCCTCTGAACCACTGAGCTGT i macFas5.chr4 C 0 I 650 s cerAty1.NW_012002071v1 1384169 156 + 3144229 gggagATGGCGTTGCATACAGAA-ATGGAGCACAGCCACCGGCTTCCGCGCTCTCCACCGTGCCCAGGACCGGACCGCTCTGAGTGGACCCGGGCAGCACCAGGGTGGCCTGGCGCCGGCTGAGAGGCAGAATCAGGCCTCTGAGCCACTGAGCTGA i cerAty1.NW_012002071v1 C 0 I 660 s chlSab2.chr13 96662443 156 + 98384682 GGGCGACGGTGTTGCATACAGAA-ATGGAGCACAGCCACCCGCTTCCGCGCTCTCCACCGTGCCCAGGACCGGAACGCTCCCAGTGGACCTGGGCAGCACCAGGGTGGCCTGGCGCCGGCTGAGATGCAGAATGAGGCCTCTGAGCTACTGAGCTGC i chlSab2.chr13 C 0 I 674 s manLeu1.NW_012106474v1 8207392 156 - 10857215 GGGCGACGGCGTTGCATACAGAA-ATGGAGCACAGCCACCCGCTTCCGCGCCCTCCACCGTGCCCAGGACCGGACCACTCCGAGTGGACCCGGGCAGCACCAGGGCGGCCTGGCGCCGGCTGAGAGGCAGAATCAGGCCTCTGAGCCACTGAGCTGA i manLeu1.NW_012106474v1 C 0 I 670 s colAng1.NW_012114488v1 15601274 155 - 23502949 GGGAGACGGTGCTGCATACAGAA-ATGGAGCAGAGCCACCTGCTTCCGCGCTCTCCACCGTGCCCAGGACC-CACGGCTCCGAGTGGACCCGGGCAGCACTAGGGCGGCCTGGCGTCGGCTGAGATGCAGAACCAGGCCTCTGAGCTACTGAGCTGC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169871208 156 + 171630274 GGGAGCCAGCACTGAATACAAAACATGAAAGAAAACCACCAGCTTCCGCACTCTCCCCTGTGCCCGGGACCTGACTGCTCTGAGGGGACCCGGAT-GCGCTGTGGTGGCCTGACACTGGCTgagatgcagaatcaggcccaagggcttctgagctgg i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1284114 138 - 2905041 GGGAGACAGCACTGAGTGGGAAACACGGAAGAAAACCACCAGCTCCCGCACTCTCCCCTGTGCCCGGGACCTGACCGCTCCGAGGGGACCCA-------------------GACGCTGCCTGAGGTGCAGAATCAGGCCTTTGAGCTTCTGAGCTGG i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1240964 156 - 2164891 gggagACAGCACTGAATACAAAACATGGAAGAAAACCACGAGCTTCCGCACTCTCCCCCGTGCCTGGGACCTGACTGCTCCGAGGGAACGCAGAC-GCTCTGTGGTGGCCTGATGCTGCCTGAGATCCAGAATCAGGCCTTTGAGCTTCTGAGCTGG i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1493436 156 - 1813869 GGGAGCCGGCACTGAATACAAAACACGGAAGAAAGCCACCAGCTTCCGCACTCTCCCCTGTGCCCGGGACCTGACTGCTTCGAGGGGACCCAGAC-GCGCTGTGGTGGCCTGACGCTGCCTgagatgcagaatcaggcctttgagcttctgagctgg i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10943660 1081 - 12073884 I e dasNov3.JH569188 550485 1447 + 760995 I e canFam3.chr1 56163948 43 + 122678785 I e nomLeu3.chr3 156292508 0 + 157873769 C e macNem1.NW_012011000v1 8353298 812 + 10161646 I a score=1505585.000000 s hg38.chr6_KB021644v2_alt 95298 234 + 185823 AATCTGCCTTTTGGCCGGACCCGGTTGATT-GGAACCGCGTTCATTTGAGGAAT----GCT-CCCTGCGACCAGAGCTCCACCAGGACACTCCTTCCCTCCGCCGGCCACGTTTGCAGGGAGCCCCTGAGAGGCAGCGGCAGCCCGGATGCTGAATCCCATTCGCCCCGGTCATTTCCGGAGCGTCTTCCAGCCCGTTCCCCGCCATGACAGCGACGTGTGCTTTGAGCTCAGTCCACAG s panTro5.chr6 173546866 234 + 175400573 AATCTGCCTTTTGGCCGGACCCGGTTGATT-GGAACCGCGTTCATTTGAGGAAT----GCT-CCCTGCGACCAGAGCTCCACCAGGACACTCCTTCCCTCCGCCGGCCACGTTTGCAGGGAGCCCCTGAGAGGCAGCGGCAGCCCGGATGCTGAATCCCATTCGCCCCGGTCATTTCCGGAGCGTCTTCCGGCCCGTTCCCCGCCATGACAGCGACGTGTGCTTTGAGCTCAGTCCACAG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171785439 234 + 173848474 AATCTGCCTTTTGGCCGGACCCGGTTGATT-GGAACCGCGTTCATTTGAGGAAT----GCT-CCCTGCGACCAGAGCTCCACCAGGACACTCCTTCCCTCCGCCGGCCACGTTTGCAGGGAGCCCCTGAGAGGCAGCGGCAGCCCGGATGCTGAATCCCATTCGCCCCGGTCATTTCCGGAGCGTCTTCCGGCCCGTTCCCCGCCATGACAGCGACGTGTGCTTTGAGCTCAGTCCACAG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11467674 233 - 12463322 AATCTGCCTTCTGGCCGGACCCGGTTGATT-GGAACCGCATTCATTTGAGGAAT----GCT-CCCTGCGACCAGAGCTCCACCAGGACACTCCTT-CCTCCGCCGGCCACGTTTGCTGGGAGCCCCTGAGAGGCAGCGGCAGCCCGGATGCTGAATCCCATTCGCCCCGGTCATTTCCGGAGCGTCTTCCAGCCCGTTCCCCGCCATGACAGCGACGTGTGCTTTGAGCTCAGTCCACAG i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170322102 214 + 172585720 AATCTGCCTTTTGGCTGGACCCAGTTGATT-GGAACCGCGTTCATTTGAGGAAG----GCT-CCCTGCGACCAGAGCTCCCCCAGGACACTCCATCCCCCCGCCAGCCACGTCTGCAGGGAGTCCCTGAGAGGCAGCAGCAGCCTGGATGCTGAATCCCATTCGC-----------CCGGAGCTTCTTCCAGCCCGTTCCCCGCCGT---------GTGTGCTTTGAGCCGAGTCCACAG i rheMac8.chr4 I 651 C 0 s macFas5.chr4 169067662 214 - 170955103 AATCTGCCTTTTGGCTGGACCCAGTTGATT-GGAACCGCGTTCATTTGAGGAAG----GCT-CCCTGCGACCAGAGCTCCCCCAGGACACTCCATCCCCCCGCCAGCCACGTCTGCAGGGAGTCCCTGAGAGGCAGCAGCAGCCTGGATGCTGAATCCCATTCGC-----------CCGGAGCGTCTTCCAGCCCGTTCCCCGCCGT---------GTGTGCTTTGAGCCGAGTCCACAG i macFas5.chr4 I 650 C 0 s macNem1.NW_012011000v1 8354110 214 + 10161646 AATCTGCCTTTTGGCTGGACCCAGTTGATT-GGAACCGCGTTCATTTGAGGAAG----GCT-CCCTGCAACCAGAGCTCCCCCAGGACACTCCATCCCCCCGCCAGCCACGTCTGCAGGGAGTCCCTGAGAGGCAGCAGCAGCCTGGATGCTGAATCCCATTCGC-----------CCGGAGCGTCTTCCAGCCCGTTCCCCGCCGT---------GTGTGCTTTGAGCCGAGTCCACAG i macNem1.NW_012011000v1 I 812 C 0 s cerAty1.NW_012002071v1 1384985 215 + 3144229 AATCTGCCTTTTGGCTGGACCCAGTGGATT-GGAACCGTGTTCATTTGAGGAAG----GCTCCCCTGCGACCAGAGCTCCCCCAGGACACTCCATCCCCCGGCCAGCCACGTCTGCAGGGAGCCCCTGAGAGGCAGCGGCAGCCTGGATGCTGAATCCCATTCGC-----------CCGGAGCGTCTTCCAGCCCGTTCCCTGCCGT---------CTGTGCTTTGAGCTGAGTCTACAG i cerAty1.NW_012002071v1 I 660 C 0 s chlSab2.chr13 96663273 225 + 98384682 AATCTGCCTTTTGGCTGGACCCGGTTGATT-GGAACCACGTTCATTTGAGGAAG----GCT-CCCTGCCACCAGAGCTCCCCCAGGACACTCCTTCCCCCCGCCGGCCGCGTCTGCAGGGAGCCCCTGAGAGGCAGCGGCAGACTGGATGCTGAATCCCATTCGCCCGGGTCATCTCCAGAGCGTCTCCCAGCCCGTTCCCCGCCAT---------GTGTGCTTTGAGCTGAGTCCACAG i chlSab2.chr13 I 674 C 0 s manLeu1.NW_012106474v1 8208218 226 - 10857215 AATCTGCCTTTTGGCTGGACCCGGTTGATT-GGAACCGTGTTCATTTGAGGAAG----GCTCCCCTGCAACCAGAGCTCCCCCAGGACACTCCTTCCCCCCGCCAGCCACGTCTGCAGGGAGCCCCTGAGAGGCAGCGGCAGCCTGGACGCTGAATCCCATTCGCCTAGGTCATCTCCAGAGCGTCTTCCAGCCCGTTCCCTGCTGT---------ATGTGCTTTGAGCTGAGTCTACAG i manLeu1.NW_012106474v1 I 670 C 0 s colAng1.NW_012114488v1 15601429 223 - 23502949 AATCTGCCTTTCGGCC-GACCCGGTGGATT-GGAACCGCGCTCATTTGAGGAAG----GCT-CCCTGCGACCAGAGCTCCCCCAGGACACTCCTTCCCCC-GCCGGCCACTTCTGCAGGGAGCGCCTGAGAGGCAGCGGCAGCCTGGATGCTGAACCCCATTCGACCGGGTCATCTCCGGAGCATCTTCCAGCCCGTTCCCCGCCAC---------GTGTGCTTTGAGCTGAGTCCACAG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169871364 214 + 171630274 aatctgccttttcccaggatccaggtgattGGGAACTGTATTCATCTGAGGAAT----GCT-CCTTGTGACCAGGGTCCCACCA-AGGACTCCTTCCCTCTGCC--TTTC-TCTGCAGGAAGCCCCTGAGAGACCACGGCAGGCAGGATGCCGAATG---------------GGCTCCGGAG-GCCTTCCAA-CCATTCCCAGCCACGACCGGGATCTGTGCTTTGAGCTGAGTCTACAG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1284252 217 - 2905041 AATCTGCCTTTTCCCAGGACCCAGGAGATT-GGAACTTCGTTCATTTGAGGAATTTGGGCT-CCTTGCAACCAGGGCCCCACC--AGGGCTCCTTTCCTCTGTCTTTTTC-TTTGCAGGGAGCCCCGGAGAGACCACGGCAGGCGGGACGCTGAGTC---------------GGCGCCAGAG-GCCTTCCAACCCATTCCCAGCCATGACCGGGATCCGGGCTCTGGGCC--GTCTACAG i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1241120 221 - 2164891 AATCTGCCTTTTCCCAGGACCCAGGTGATT-GGAACTTCGTTCATTTGAGGAATTTGGGCT-CCTTGCAACCAGGGCCCTACCAGGGGACTCCTTCCCTCTGCCTTTCTC-TTTGCAGGGAGCCCCTGAGAGACCGCGGCAGGCGGGATGCTGAATC---------------GGCTCCGGAG-GCCTTCCAACCCATTCCCAGCCATGACCGGGATCAGTGCTTTGAGCTGAGTCTACAG i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1493592 217 - 1813869 aatctgccttttcccaggacccaggtgatt-GGAACTGCGTTCATTTGAGGAAT----GCT-CCTTGCGACCAGGGCCCCACCAAGGGACTCCTTCCCTCTGCCTTTCTC-TTTGCAGGGAGCCCCTGAGAGACCGCGGCAGGCGGGATGCTGAATC---------------GGCTCCGGAG-GCCTTCCAGCCCATTCCCAGCCACGACCGGGATCTGTGCCTTGAGCTGAGTCTGCAG i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10943660 1081 - 12073884 I e dasNov3.JH569188 550485 1447 + 760995 I e canFam3.chr1 56163948 43 + 122678785 I e nomLeu3.chr3 156292508 0 + 157873769 C a score=175799.000000 s hg38.chr6_KB021644v2_alt 95532 18 + 185823 CAAAGACCACCTTGGTTC s panTro5.chr6 173547100 18 + 175400573 CAAAGACCACCTTGGTTC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171785673 18 + 173848474 CAAAGACCACCTTGGTTC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11467907 18 - 12463322 CAAAGACCACCTTGGTTC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156292508 18 + 157873769 CAAAGACCACCTTGGTTC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170322316 18 + 172585720 CAAAGACCTCCTTGGTTC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169067876 18 - 170955103 CAAAGACCTCCTTGGTTC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8354324 18 + 10161646 CAAAGACCTCCTTGGTTC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1385200 18 + 3144229 CAAAGACCTCCTTGGTTC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96663498 18 + 98384682 CAAAGACCTCCTTGGTTC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8208444 18 - 10857215 CAAAGACCTCCGTGGTTC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15601652 18 - 23502949 CAAAGAGCTCCTTGGTTC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169871578 18 + 171630274 CAAAGGCCGCCTTGGCTC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1284469 18 - 2905041 CCAAGGCCACCTTGGTTC i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1241341 18 - 2164891 CAAAGACCACCTTGGTTC i cebCap1.NW_016107695v1 C 0 I 86 s aotNan1.NW_018494782v1 1493809 18 - 1813869 CAAAGGCCACCTTGGTTC i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10943660 1081 - 12073884 I e dasNov3.JH569188 550485 1447 + 760995 I e canFam3.chr1 56163948 43 + 122678785 I a score=105436.000000 s hg38.chr6_KB021644v2_alt 95550 19 + 185823 TTGTCCCGCCGCAACCACA s panTro5.chr6 173547118 18 + 175400573 T-GTCCCGCCGCAACCACA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171785691 18 + 173848474 T-GTCCCGCCGCAACCACA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11467925 18 - 12463322 T-GTCCCGCCGCAACCGCA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156292526 18 + 157873769 T-GTCCCGCTGCAACCACA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170322334 18 + 172585720 T-GTCCCGTTACAACCACA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169067894 18 - 170955103 T-GTCCCGTTACAACCACA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8354342 18 + 10161646 T-GTCCCGTTACAACCACA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1385218 18 + 3144229 T-GTCCCGTTACAACCACG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96663516 18 + 98384682 T-GTCCCGCCGCAACCACA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8208462 18 - 10857215 T-GTCCCACTGCAACCACA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15601670 18 - 23502949 T-GTCCCGCCCCAACCACA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169871596 18 + 171630274 T-CTCCCGGGGCCTATACT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1284487 18 - 2905041 T-GTCCCGGGGCCTCTACT i saiBol1.JH378287 C 0 C 0 s aotNan1.NW_018494782v1 1493827 18 - 1813869 T-GTCCCGGGGCCTCTACT i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10943660 1081 - 12073884 I e cebCap1.NW_016107695v1 1241359 86 - 2164891 I e dasNov3.JH569188 550485 1447 + 760995 I e canFam3.chr1 56163948 43 + 122678785 I a score=533217.000000 s hg38.chr6_KB021644v2_alt 95569 67 + 185823 TCCGAAGAAAGGGGTCAGGTATTCTAGGCGTACGGGGACTGATAAATTCCAAAAATATGTTGCCTAG-- s panTro5.chr6 173547136 67 + 175400573 TCCGAAGAAAGGGGTCAGGTATTCCAGGCGTACGGGGACTGATAAATTCCAAAAATATGTTGTCTAG-- i panTro5.chr6 C 0 C 0 s panPan2.chr6 171785709 67 + 173848474 TCCGAAGAAAGGGGTCAGGTATTCCAGGCGTACGGGGACTGATAAATTCCAAAAATATGTTGTCTAG-- i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11467943 67 - 12463322 TCCGAAGAAAGGGGTCAGGTATTCTAGGCGTACAGGGACTGATAAATTCCAAAAATGTGTTGTCTAG-- i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156292544 66 + 157873769 TCGGAAGAAAGGGGTCAGGTATTCTAGGCGTACAGGGACTGATAAATTCCAAAAATATG-TGTCTAG-- i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170322352 67 + 172585720 TCGGAAGAAAGGGGACAGGTATTCTAGAAGCACAGGCACTGACAAATTCCAAAAACATGTTGTCTAG-- i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169067912 67 - 170955103 TCGGAAGAAAGGGGACAGGTATTCTAGAAGCACAGGCACTGACAAATTCCAAAAACATGTTGTCTAG-- i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8354360 67 + 10161646 TCGGAAGAAAGGGGACAGGTATTCTAGAAGCACAGGCACTGACAAATTCCAAAAACATGTTGTCTAG-- i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1385236 67 + 3144229 TCGGAAGAAAGGGGTCAGGTATTCTAGAAGCACAGGCACTGACAAATTCCAAAAACATGTTGTCTAG-- i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96663534 67 + 98384682 TCGGAAGAAAGGGGTCAGGTATTCTAGAAGCACAGGCACTGACAAATTCCAAAAACATGTTGTCTAG-- i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8208480 67 - 10857215 TCGGAAGAAAGGGGACAGGTATTCTAGAAGCACAGGCACTGACAAATTCCAAAAACATATTGTCTAG-- i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15601688 67 - 23502949 TCGGAAGAAAGGGGTCAGGTATTCTAGAAGCACAGGCACTGACAAATTCCAAAAGCATGTTGTCTAG-- i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169871614 67 + 171630274 TTGGAAGAAAGGATGCAGGTGTTCTCGGAGGACAGGGACTGATACATTCCGAAAACATGTTGTCTAG-- i calJac3.chr4 C 0 I 1 s saiBol1.JH378287 1284505 67 - 2905041 TTGGAAGAAAGGACGCAGGTGTTCTCGGGGGACAGGGACTGATACGTTCCAAAAACAGGTTGTCTAG-- i saiBol1.JH378287 C 0 I 2 s aotNan1.NW_018494782v1 1493845 67 - 1813869 TTGGAAGAAAGGATGCAGGTGTTCTCGGAGGACAGGGATTGATACATTCCTAAAACAGGTTGTCTAG-- i aotNan1.NW_018494782v1 C 0 I 1 s dasNov3.JH569188 551932 68 + 760995 TTTGGACAAGAGGGACGGTCATTCTATGTGTACAGAATTGGATATATT-TGAAAGCATATTGTCTACAT i dasNov3.JH569188 I 1447 C 0 e otoGar3.GL873575 10943660 1081 - 12073884 I e cebCap1.NW_016107695v1 1241359 86 - 2164891 I e canFam3.chr1 56163948 43 + 122678785 I a score=1068366.000000 s hg38.chr6_KB021644v2_alt 95636 127 + 185823 AAAA-GATTGTTAAAAATA---TAAAGGCAAGTTTTATTCATTAATGTTCCCTTGCGCTGTCTGTGAAGAAAGGT--A-------GGTTAAAGAGGTACTTCGAAGCAAATCTGTACC-AGGAAAATAGAATTTGTTTTCA s panTro5.chr6 173547203 128 + 175400573 AAAAAGATTGTTAAAAATA---TAAAGGCAAGTTTTATTCATTAATGTTCCCTTGCGCTGTCTGTGAAGAAAGGT--A-------GGTTAAAGAGGTACTTAGATGCAATTCTCTACC-AGGAAAATAGAATTTGTTTTCA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171785776 128 + 173848474 AAAAAGATTGTTAAAAATA---TAAAGGCAAGTTTTATTCATTAATGTTCCCTTGCGCTGTCTGTGAAGAAAGGT--A-------GGTTAAAGAGGTACTTAGATGCAATTCTCTACC-AGGAAAATAGAATTTGTTTTCA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11468010 128 - 12463322 AAAAAGATTGTTAAAAATA---TAAAGGCAGGTTTTATTCATTAATGTTCCCTTGCGCTGTCTGTGAAGAAAGGT--A-------GGTTAAAGAGGTACTCAGAAGCAATTCTGTACC-AGGAAAATAGAATTTGTTTTCA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156292610 128 + 157873769 AAAAAAATTGTTAAAAATA---TAACGGCAAATTTTATTCATTAATATTCCCTTGCCCTGTCTGTGAAGAAAGGT--A-------GGTTAAAGAGGTACTTAGAAGCAATTGTGTACC-AGGAAAATAGAATTTGTTTTCG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170322419 131 + 172585720 AAAAACATTGTTAAAAATACCATAAAGACAAGTTTCATTCATTAATGTTCCCTTGCCCTGTCTGCGAAGAAAGGT--A-------GGTTAAAGAGGTACTTAGAAGTAACTCTGTACC-AGGAAAATAGAATTTGTTTGCA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169067979 131 - 170955103 AAAAACATTGTTAAAAATACCATAAAGACAAGTTTCATTCATTAATGTTCCCTTGCCCTGTCTGCGAAGAAAGGT--A-------GGTTAAAGAGGTACTTAGAAGTAACTCTGTACC-AGGAAAATAGAATTTGTTTGCA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8354427 131 + 10161646 AAAAACATTGTTAAAAATACCATAAAGACAAGTTTCATTCATTAATGTTCCCTTGCCCTGTCTGCGAAGAAAGGT--A-------GGTTAAAGAGGTACTTAGAAGTAACTCTGTACC-AGGAAAATAGAATTTGTTTGCA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1385303 129 + 3144229 AAAAACATTGTTAAAAATACCATAAAGACAAGTTTCATTCATTAATGTTCCCTTGCCCTGTCTGCGAAGAAAGGT-----------GTTAAAGAGGTACTTAGAAGTAACTCTGCACC-AGGAAAATAGAATTTGTTTGCA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96663601 120 + 98384682 TAAAACATTGTTAAAAATACCATAAAGACAAGTTTCATTCATTAATGTTCCCTTGCCCTGTCTGCAAAG--------------------AAAGAAGTACTTAGAAGTAACTCTGCACC-AGGAAAATAGAATTTGTTTTCA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8208547 131 - 10857215 AAAAACATTGTTAAAAATACCATAAAGACAAGTTTCATTCATTAATGTTCCCTTGCCCTGTCTGCGAAGAAAGGT--A-------GGTTAAAGAGGTACTTAGAAGTAACTCTGCACC-AGGAAAATAGAATTTGTTTGCA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15601755 129 - 23502949 AAAAACATTGTTAAAAATACAGTAAAGACAAGTTTCATTCATGAATGTTCCCTTGCCCTGTCTGCGAAGAAAGGT--A-------GGTTAAAGAGGTACTTAGAAGTAA--CTGTACC-AGGAAAATGGAATTTGTTTGCA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169871682 124 + 171630274 -AAAAAATTCTTGCAAATA---GGAGGACAAGTTTTATGCATGGATGCTCCCTTGCCCTGTCTGTGAAGAAAGGT--G-------GGTTAAGTAGGTGCTTAGAAGCAATTCTGTACC-AGCAAAATG---TTTGTTTTCT i calJac3.chr4 I 1 C 0 s saiBol1.JH378287 1284574 126 - 2905041 -AAAAAATTCTTACAATTA---GGAGGATAAGTTTTATTCATGGATGTTCCCTTGCCCTGTCTGTGAAGAAAGGTGGG-------GGTTAAGTAGGTGCTTAGAAGCAATTCTGTAGC-AGCAAAATG---TTTGTTTCCA i saiBol1.JH378287 I 2 C 0 s cebCap1.NW_016107695v1 1241445 126 - 2164891 -AAAAAATTCTTACAAATA---GGAGGACAAGTTTTATTCATGGATGCTCCCTTGCCCTGTCTGTGAAGAAAGGTGGG-------GGTTAAGTAGGTGCTTAGAAGCAATTCTGTACC-AGCAAAATG---TTTGTTTTTA i cebCap1.NW_016107695v1 I 86 C 0 s aotNan1.NW_018494782v1 1493913 124 - 1813869 -GAAAAATTCTTACAAATA---GGAGGACAAGTTTTATTCATGGATGTTTCCTTGCCCTGTCTGTGAAGAAAGGT--G-------GGTTAAGTAGGTGCTTAGAAGCAATTCTGTACC-AGCAAAATG---TTTGTTTTTA i aotNan1.NW_018494782v1 I 1 C 0 s dasNov3.JH569188 552000 134 + 760995 -AAAATATTGTAGGTAATA---TAAAGAAATGTCTTGTTTATTAATATTCTCTTATACCATCCATGAAGAAAAAG--AGTGCAGTGGATACtgtggtcgtttgagactg-tatgtacctcagaaaagataatgtgcttaca i dasNov3.JH569188 C 0 I 1525 e otoGar3.GL873575 10943660 1081 - 12073884 I e canFam3.chr1 56163948 43 + 122678785 I a score=911578.000000 s hg38.chr6_KB021644v2_alt 95763 99 + 185823 CATCTTTTGAAAGATAAGTGAAATTCCTTCAGAGTCCACAC-CCATGCTTTTATAAACCTCTGATACACTAACAAATCCAAAGAAAAATTGAAAACAAGC s panTro5.chr6 173547331 99 + 175400573 CATCTTTTGCAAGATAAGTGAAATTCCTTCAGAGTCCACAC-CCATGCTTTTATAAACCTCTGATACACTAACAAATCCAAAGAAAAATTGAAAACAAGC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171785904 99 + 173848474 CATCTTTTGCAAGATAAGTGAAATTCCTTCAGAGTCCACAC-CCATGCTTTTATAAACCTCTGATACACTAACAAATCCAAAGAAAAATTGAAAACAAGC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11468138 99 - 12463322 CATCTTTTGCAAGATAAATGAAATTCCTTTAGAGTCCACAC-CCATGCTTTTATAAACCTCTGATACACTAACAAATCCAAAGAAAAATTGAAAACAAGC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156292738 97 + 157873769 CATCTTTTGCAAGATAAATGAAATTCCTTTAGAGTCCACAC-CCATGCTTTTATAATCGCCTGATACACCAAC--ATCCAAAGAAAAATTGAAAACAAGC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170322550 97 + 172585720 CATATTTTGCAAGATAAATGAAATTCCTTTAGAGTCCACAC-CCATGCTTTTATAATCCTCTGACACACTAAC--ATCCAAAGAAAAATTGGAAACAAGC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169068110 97 - 170955103 CATATTTTGCAAGATAAATGAAATTCCTTTAGAGTCCACAC-CCATGCTTTTATAATCCTCTGACACACTAAC--ATCCAAAGAAAAATTGGAAACAAGC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8354558 97 + 10161646 CATATTTTGCAAGATAAATGAAATTCCTTTAGAGTCCACAC-CCATGCTTTTATAATCCTCTGACACACTTAC--ATCCAAAGAAAAATTGGAAACAAGC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1385432 97 + 3144229 CATATTTTGCAAGACAAATGAAATTCCTTTAGAGTCCACAC-CCATGCTTTTATAATCCTCTGACACACTAAC--ATCCAAAGAAAAATTGGAAACAAGC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96663721 97 + 98384682 CATATTTTGCAAGATAAATGAAATTCCTTTAGAGTTCACAC-CCATGGTTTTATAATCCTCTGACACACTAAC--ATCCAAAGAAAAGTTGGAAACAAGC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8208678 97 - 10857215 CATATTTTGCAAGACAAATGAAATTCCTTTAGAGTCCACAC-CCATGGTTTTATAATCCTCTGACACACTAAC--ATCCAAAGAAAAATTGGAAACAAGC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15601884 97 - 23502949 CATAGTTTGCAAGATAAATGAAATTCCTTTAGAGTCCGCAC-CCATGCTTTTATAATCCTCTGATACACTAAC--ATCCAAAGAAAAATTGGAAACAAGC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169871806 98 + 171630274 CATATTTTGCAAGATAAGTGAAATTCCTTTAGCATCCCCCCTCCATGTTTTTATAATCCTCTGATAGACTAAC--ATCCAAACAAAACTTGGAAACAAGC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1284700 97 - 2905041 CATATTTTGCAAGATAAATGAAATTCCTTTAGCATCCCCAC-CCATGCTTTTATAAGCCTCTGATAGACCAAC--ATCCAAACACAAATTGGAAACAAGC i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1241571 97 - 2164891 CATATTTTGCAAGATAAATGAAATTCCTTTAGCATCCCCAC-CCATGCTTTTATAATCTTCTGCTAGACTAAC--ATCCAAACAAAAATTGGAAACAAGC i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1494037 97 - 1813869 CATATTTTGCAAGATAAATGAAATTCCTTTAGCATCCCCAC-CCATGCTCATATAATCCTCTGACAGACCAAC--GTCCAAACAGAAATTGGAAACAAGC i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10943660 1081 - 12073884 I e dasNov3.JH569188 552134 1525 + 760995 I e canFam3.chr1 56163948 43 + 122678785 I a score=48319.000000 s hg38.chr6_KB021644v2_alt 95862 5 + 185823 GAGAA s panTro5.chr6 173547430 5 + 175400573 GAGAA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171786003 5 + 173848474 GAGAA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11468237 5 - 12463322 GAGAA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156292835 5 + 157873769 AAGAA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170322647 5 + 172585720 AAGAA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169068207 5 - 170955103 AAGAA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8354655 5 + 10161646 AAGAA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1385529 5 + 3144229 AAGAA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96663818 5 + 98384682 AAGAA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8208775 5 - 10857215 AAGAA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15601981 5 - 23502949 AGGAG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169871904 5 + 171630274 AGGAA i calJac3.chr4 C 0 I 3 s saiBol1.JH378287 1284797 5 - 2905041 AAGAA i saiBol1.JH378287 C 0 I 3 s cebCap1.NW_016107695v1 1241668 5 - 2164891 AAGAA i cebCap1.NW_016107695v1 C 0 I 89 s aotNan1.NW_018494782v1 1494134 5 - 1813869 AAGAA i aotNan1.NW_018494782v1 C 0 C 0 s dasNov3.JH569188 553659 5 + 760995 GAGGA i dasNov3.JH569188 I 1525 C 0 e otoGar3.GL873575 10943660 1081 - 12073884 I e canFam3.chr1 56163948 43 + 122678785 I a score=10920.000000 s hg38.chr6_KB021644v2_alt 95867 1 + 185823 A s panTro5.chr6 173547435 1 + 175400573 A i panTro5.chr6 C 0 C 0 s panPan2.chr6 171786008 1 + 173848474 A i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11468242 1 - 12463322 A i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156292840 1 + 157873769 A i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170322652 1 + 172585720 A i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169068212 1 - 170955103 A i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8354660 1 + 10161646 A i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1385534 1 + 3144229 A i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96663823 1 + 98384682 A i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8208780 1 - 10857215 A i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15601986 1 - 23502949 A i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169871912 1 + 171630274 A i calJac3.chr4 I 3 C 0 s saiBol1.JH378287 1284805 1 - 2905041 A i saiBol1.JH378287 I 3 C 0 s aotNan1.NW_018494782v1 1494139 1 - 1813869 A i aotNan1.NW_018494782v1 C 0 I 84 s dasNov3.JH569188 553664 1 + 760995 A i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10943660 1081 - 12073884 I e cebCap1.NW_016107695v1 1241673 89 - 2164891 I e canFam3.chr1 56163948 43 + 122678785 I a score=154509.000000 s hg38.chr6_KB021644v2_alt 95868 24 + 185823 AAGGAGACAGAAAATGCACAAGAT s panTro5.chr6 173547436 24 + 175400573 AAGGAGACAGAAAATGCACAAGAT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171786009 24 + 173848474 AAGGAGACAGAAAATGCACAAGAT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11468243 24 - 12463322 AAGGAGACAGAAAATGCACAAGAT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156292841 24 + 157873769 AAGGAGACAGAAAAGGCACAGGAT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170322653 24 + 172585720 AAGGAAGCAGAAAATGCACAAGAT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169068213 24 - 170955103 AAGGAAGCAGAAAATGCACAAGAT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8354661 24 + 10161646 AAGGAAGCAGAAAATGCACAAGAT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1385535 24 + 3144229 AAGGAAGCAGAAAATGCACAAGAT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96663824 24 + 98384682 AAGGAAGCAGAAAATGCACAAGAT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8208781 24 - 10857215 AAGGAAGCAGAAAATGCACAAGAT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15601987 23 - 23502949 AAGGAA-CGGAAAATGCACAAGAT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169871913 24 + 171630274 AAACAAATGGAGAAGCCCCGAGAT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1284806 24 - 2905041 AAACAAACGGAAAACCCATGAGAT i saiBol1.JH378287 C 0 C 0 s dasNov3.JH569188 553665 24 + 760995 AAAAAAAATAGAAATATAGGGGAA i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10943660 1081 - 12073884 I e aotNan1.NW_018494782v1 1494140 84 - 1813869 I e cebCap1.NW_016107695v1 1241673 89 - 2164891 I e canFam3.chr1 56163948 43 + 122678785 I a score=494940.000000 s hg38.chr6_KB021644v2_alt 95892 75 + 185823 ACACCGCCCTTTTTGTTTGTTTGTGATTCAGGGCTCA-GGATTGAC--TGGGTCCTCGGG--AGGGGA-CTCGAGGGCAGA s panTro5.chr6 173547460 75 + 175400573 ACACCGCCCTTTTTGTTTGTTTGTGATTCAGGGCTCA-GGATTGAC--TGGGTCCTCGGG--AGGGGA-CTCGAGGGCAGA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171786033 75 + 173848474 ACACCGCCCTTTTTGTTTGTTTGTGATTCAGGGCTCA-GGATTGAC--TGGGTCCTCGGG--AGGGGA-CTCGAGGGCAGA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11468267 76 - 12463322 ACACCGCCCTTTTTGTTTGTTTGTGATTCAGGGCTCA-GGATTAAC--TGGGTCCTCGGG-AAGGGGA-CTCGAGGGCAGA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156292865 75 + 157873769 ACACCGCCCTTTTTGTTTGTTTGTGTTTCAGGGCTCA-GGATTGAC--TGGGTCCTCGGG--AGGGGA-CTCGAGGGCAGA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170322677 75 + 172585720 ACACCACCCTTTTTGTTTGTTTGTGTTTCAGGGCTCA-GGATTGAC--TGGGTCCTCGGG--AGGGGA-CTCGAGGGCAGA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169068237 75 - 170955103 ACACCACCCTTTTTGTTTGTTTGTGTTTCAGGGCTCA-GGATTGAC--TGGGTCCTCGGG--AGGGGA-CTCGAGGGCAGA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8354685 75 + 10161646 ACACCACCCTTTTTGTTTGTTTGTGTTTCAGGGCTCA-GGATTGAC--TGGGTCCTCGGG--AGGGGA-CTCGAGGGCAGA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1385559 75 + 3144229 ACACCGCCCTTTTTGTTTGTTTGTGTTTCAGGGCTCA-GGATTGAC--TGGGTCCTCGGG--AGGGGA-CTCGAGGGCAGA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96663848 75 + 98384682 ATACCGCCCTTTTTGTTTGTTTGTGTTTCAGGGCTCA-GGATTGAC--TGGGTCCTCGGG--AGGGGA-CTCGAGGGCAGA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8208805 75 - 10857215 ACACCGCCCTTTTTGTTTGTTTGTGTTTCAGGGCTCA-GGATTGAC--TGGGTCCTCGGG--AGGGGA-CTCGAGGGCAGA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15602010 75 - 23502949 ACACCGCCCTTTTTGTTTGTTTGTGTTTCAGGGCTCA-GGATTGAC--TGCGTCCTCGGG--AGGGGA-CTCGAGGGCAGA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169871937 57 + 171630274 GCACTGCCCGTTGTC--TGTTCGTCATTCGGGGCCCA-GGACTGGC--TGG--TCCCCAG----------------GCAG- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1284830 61 - 2905041 GCCCTGAACTTCGTCCATGTTGGTCTTTTGGGGCTCA-GGGTTGAC--TGGGTCCTCCAG----------------GCAG- i saiBol1.JH378287 C 0 C 0 s canFam3.chr1 56163991 77 + 122678785 ATAATGCCTTATTTG--TATTTGTTTTTCAGGGTTTAGGGATTGATCACGGGTCCCAGGGGAAGGGGG-GACGAGGGAGA- i canFam3.chr1 I 43 C 0 s dasNov3.JH569188 553689 70 + 760995 AAATGATCCCATTTGGCTTTTG------CAGGGTTAAAGGACTGAT--TGTGTCCTGTGG--AGGAGAGCAAGAGGGAAA- i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10943660 1081 - 12073884 I e aotNan1.NW_018494782v1 1494140 84 - 1813869 I e cebCap1.NW_016107695v1 1241673 89 - 2164891 I a score=1518114.000000 s hg38.chr6_KB021644v2_alt 95967 152 + 185823 AGGATCTATTAATCTTACAACTATGTG-TTTCATTTTCCAAGTGGTCAGTTTT---TTAGGTTACTTTATGAAAAACTGAAATGGAACACAGAATATGAACAA-TTTCTCAGGGTAAGAGCAGCTAGATGTAAA----AATAACATAATGCAATTAAAGAA s panTro5.chr6 173547535 152 + 175400573 AGGATCTATTAATCTTACAACTATGTG-TTTCATTTTCCAAGTGGTCAGTTTT---TTAGGTTACTTTATGAAAAACTGAAATGGAACACAGAATATGAACAA-TTTCTCAGGGTAAGAGCAGCTAGATGTAAA----AATAGCATAATGCAATTAAAGAA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171786108 152 + 173848474 AGGATCTATTAATCTTACAACTATGTG-TTTCATTTTCCAAGTGGTCAGTTTT---TTAGGTTACTTTATGAAAAACTGAAATGGAACACAGAATATGAACAA-TTTCTCAGGGTAAGAGCAGCTAGATGTAAA----AATAGCATAATGCAATTAAAGAA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11468343 151 - 12463322 AGGATCTATTAATCTTACAACTATGTG-TTTCATTTTTCAAGTGGTCAGTTTT---TTAGGTTACTTTATGAAAAACTGAAATGGAACACAGAATATAAACAA-TTTCTCAGGGTAAGAGCAGCTAGATGT-AA----AATAGCATAATGCAATTAAAGAA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156292940 151 + 157873769 AGGATCTATTAATCTTACAACTATGTG-TTTCATTTTCCAAGTGGTCAGTTTT---TTAGGTTACTTTGTGAAAAACTGAAATGGAACACAGAATATGAACAA-TTTCTCAGGGTAAGAGCAGCTAGATGT-AA----AATAGCATCATGCAATTAAAGAA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170322752 151 + 172585720 AGGATCTATTAATCTGACAACTATGTG-TTTCATTTTCCAAGTGGGCAGTTTT---TTAGTTTACTTTATGAAAAGCTGAAATGGAACACAGAATATGAACAA-TTTCTCAGGCTAAGAACAGTTGGATAT-AA----AATAGCATAATGCAATTAAAGAA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169068312 151 - 170955103 AGGATCTATTAATCTGACAACTATGTG-TTTCATTTTCCAAGTGGGCAGTTTT---TTAGTTTACTTTATGAAAAGCTGAAATGGAACACAGAATATGAACAA-TTTCTCAGGCTAAGAACAGTTGGATAT-AA----AATAGCATAATGCAATTAAAGAA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8354760 151 + 10161646 AGGATCTATTAATCTGACAACTATGTG-TTTCATTTTCCAAGTGGGCAGTTTT---TTAGTTTACTTTATGAAAAGCTGAAATGGAACACAGAATATGAACAA-TTTCTCAGGCTAAGAACAGTTGGATAT-AA----AATAGCATAATGCAATTAAAGAA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1385634 151 + 3144229 AGGATCTATTAATCTGACAACTATGTG-TTTCATTTTCCAAGTGGGCAGTTTT---TTAGTTTACTTTATGAAAAGCTGAAATGGAACACAGAATATGAACAA-TTTCTCAGGCTAAGAACAGTTGGATAT-AA----AATAGCATAATGCAATTAAAGAA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96663923 151 + 98384682 AGGATCTATTAATCTGACAAGAATGTG-TTTCATTTTCCAAGTGGGCAGTTTT---TTAGTTTACTTTATGAAAAACTGAAATGGAACACAGAATATGAACAA-TTTCTCAGGCTAAGAACAGTTAGATAT-AA----AATAGCATAATGCAATTAAAGAA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8208880 151 - 10857215 AGGATCTATTAATCTGACAACTACATG-TTTCATTTTCCAAGTGGGCAGTTTT---TTAGTTTACTTTATGAAAAGCTGAAATGGAACACAGAATATGAAAAA-TTTCTCAGGCTAAGAACAGTTGGATAT-AA----AATAGCATAATGCAATTAAAGAA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15602085 151 - 23502949 AGGATCTATTAATCTGACAACTACGTG-TTTCATTTTCCAAGTGGGCAGTTTT---TTAGTTTACTTTATGAAAAGCTGAAATGGAACACAGAATATGAACAA-TTTCTCAGGCTAAGAACAGTTAGATAT-AA----AATAGCATAATGCAATTAAAGAA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169871994 146 + 171630274 AGGGCCTAGTAACCTCACATCCATGCA-TTTCATTTCCCAAGTGCTCAGCTTT--------TTACTTTATGAAAAACTGAAACGGAGCACAGAATGCGAACTG-TGTCTCAGGGTGAGAACAGCCATACAC-AA----AACAACAGACTGCAATTAAAGAG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1284891 146 - 2905041 AGGATTTAGTCATCTCACATCTATGTG-TTTCATTTCCCGAGTGGTCAGCTTT--------TTACTTTATGAAAAACTGAAACTGAGCACAGAATAGGAACTA-TGTCTCAGGGTGAGAACAGCCACACAC-AA----AATAACAGATTGCAATTAAAGAA i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1241762 146 - 2164891 AGGATCTAGTCATCTCACATCAGTGTG-TTTCATTTCCCAAGTGGTCAGCTTT--------TTACTTTATGAAAAACTGAAACGGAGCACAGAATGTGAACTA-TGTCTCAGGGTGAGAAAAGCCATATAC-AA----AATAACAGATTGCAATTAAGGAA i cebCap1.NW_016107695v1 I 89 C 0 s aotNan1.NW_018494782v1 1494224 139 - 1813869 AGGATCTAGTAATCTCACATCTGTGTG-TTTCATTTCCCAAGTGGTCAGCTTT--------TTACTTTATGAAAAACTGAAACGGAGCA-------TGAACTA-TGTCTCAGGGTGAGAACAGCCATATAC-AA----AATAACAGATTGCAATTAAAGAA i aotNan1.NW_018494782v1 I 84 C 0 s canFam3.chr1 56164068 159 + 122678785 GGAACTTATTAGTCTTGTTACTATGTG-TTTTGTTTTTTCAGAGGTTAGTTTTTGTTTAGTTTGCTTTATTAAAAATTGAAATGGAGCACTGAATTTGAATGATTTTCTTAGGGTAAGAACAACTGGATAT-GAAATGAATAAAATATTGCAATTAAAGGA i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 553759 159 + 760995 CTAATCTATTAATCTTATTACTATGTGATTTTGTTTTTTCAGTGGTCAGTGTTTATTTAGTTTGC-TTATTAAAAATTGAAATGTAGCATATAATTTGAATAATTTTCATAGAGTAATGACAACTAGATAT-GAAGCAAATAAAAATTTGTAATTAAAGAA i dasNov3.JH569188 C 0 I 618 e otoGar3.GL873575 10943660 1081 - 12073884 I a score=147476.000000 s hg38.chr6_KB021644v2_alt 96119 21 + 185823 GAA-----------------------------------------------------------ATCTTCCAGCAAATAGAA s panTro5.chr6 173547687 21 + 175400573 GAA-----------------------------------------------------------ATCTTCCAGCAAATAGAA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171786260 21 + 173848474 GAA-----------------------------------------------------------ATCTTCCAGCAAATAGAA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11468494 21 - 12463322 GAA-----------------------------------------------------------ATCCTCCAGCAAATAGAA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156293091 21 + 157873769 GAA-----------------------------------------------------------ATCTTCCAGCGAATAGAA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170322903 21 + 172585720 GAA-----------------------------------------------------------ATTGTCCAGTGAATAGGA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169068463 21 - 170955103 GAA-----------------------------------------------------------ATTGTCCAGTGAATagga i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8354911 21 + 10161646 GAA-----------------------------------------------------------ATTGTCCAGTGAATAGGA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1385785 21 + 3144229 GAA-----------------------------------------------------------ATTGTCCAGTGAATAGGA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96664074 21 + 98384682 GAA-----------------------------------------------------------ATTGTCCAGTGAATAGGA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8209031 21 - 10857215 GAA-----------------------------------------------------------ATTGTCCAGTGAATagga i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15602236 21 - 23502949 GAA-----------------------------------------------------------ACTGTCCAGTGACTAGGA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169872140 19 + 171630274 GAA-------------------------------------------------------------CCTTCAGTGAATAGAA i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1285037 80 - 2905041 GAAACCTTCCAGTGAATAGAAAACAGCCATATACAAAATAACAGATTGCAATTAAAGAAGAAACCTTCCAGTGAATAGAA i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1241908 21 - 2164891 GAA-----------------------------------------------------------ACCTTCCAGTGAATAGAA i cebCap1.NW_016107695v1 C 0 I 140 s aotNan1.NW_018494782v1 1494363 21 - 1813869 GAA-----------------------------------------------------------ACCTTCCAGTGAATAGAA i aotNan1.NW_018494782v1 C 0 I 138 s canFam3.chr1 56164227 29 + 122678785 AAA---------------------------------------------------TAAAATGAATCTTACAGTGACTAGAA i canFam3.chr1 C 0 C 0 e otoGar3.GL873575 10943660 1081 - 12073884 I e dasNov3.JH569188 553918 618 + 760995 I a score=674569.000000 s hg38.chr6_KB021644v2_alt 96140 115 + 185823 CCCCATTTCGGGGA---------------------TTTTCACCGTGGGCGTGAGGGTCACACA--------AGACTGAAGCCCGCCC-AGGAGC--------------------------------------------------------------------------------------------AGGCGAGGT-----------CACTGCAGG------TGGTCAGTTACAGAGCTCTGCGTCATAGCCCTC s panTro5.chr6 173547708 115 + 175400573 CCCCATTTCGGGGA---------------------TTTTCACCGTGCGTGTGAGGGTCACACA--------AGACTGAAGCCCGCCC-AGGAGC--------------------------------------------------------------------------------------------AGGCGAGGT-----------CACTGCAGG------TGGTCAGTTACAGAGCTCTGCGTCATAGCCCTC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171786281 115 + 173848474 CCCCATTTCGGGGA---------------------TTTTCACCGTGGGCGTGAGGGTCACACA--------AGACTGAAGCCCGCCC-AGGAGC--------------------------------------------------------------------------------------------AGGCGAGGT-----------CACTGCAGG------TGGTCAGTTACAGAGCTCTGCGTCATAGCCCTC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11468515 115 - 12463322 CCCCATTTCGGGGA---------------------TTTTCACCGTGGGTGTGAGGGTCACACA--------AGACTGAAGCCCGCCC-AGGAGC--------------------------------------------------------------------------------------------AGGCGAGGT-----------CACTGCAGG------TGGTCAGTTACAGAGCTCTGCGTCATAGCCCTC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156293112 116 + 157873769 CCCCATTTCGGGGA---------------------TTTTCACCGTGGGCGTGAGGGTCACACA--------TGACTGAAGCCCGCCCGAGGGGC--------------------------------------------------------------------------------------------AGGCGAGGT-----------CACTGCAGG------TGGTCAGTTACAGAGCTGTGCGTCACAGCCTTC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170322924 116 + 172585720 CCCCATTTCGGGGA---------------------TTTCCACAGTGGACGTGAGGGTCACACA--------CGACTGAAGCCCGCCCGAGGAGC--------------------------------------------------------------------------------------------AGGCAAGGT-----------CACTTCAGG------TGGTCAGTTACAGAGCTGTGCGTCATAGCCTTT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169068484 116 - 170955103 ccccatttcgggga---------------------tttccacagtggacgtgagggtcacaca--------cgactgaagcctgcccgaagagc--------------------------------------------------------------------------------------------aggcaaggt-----------cacttcagg------tggtcagttacagagCTGTGCGTCATAGCCTTT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8354932 116 + 10161646 CCCCATTTCGGGGA---------------------TTTCCACAGTGGACGTGAGGGTCACACA--------CGACTGAAGCCCGCCCGAGGAGC--------------------------------------------------------------------------------------------AGGCAAGGT-----------CACTTCAGG------TGGTCAGTTACAGAGCTGTGCGTCATAGCCTTT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1385806 117 + 3144229 CCCCATTTCGGGGA--------------------TTTTTCACAGTGGACGTGAGGGTCACACA--------CGACTGAAGCCCTCCCGAGGAGC--------------------------------------------------------------------------------------------AGGCAAGGT-----------CACTTCAGG------TGGTCAGTTACAGAGCTGTGCGTCATAGCCTTC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96664095 116 + 98384682 CCCCatttcaggga---------------------ttttcacagtggacatgagggtcacaca--------cgacaGAAGCCCTCCCGAGGAGC--------------------------------------------------------------------------------------------AGGCAAGGT-----------CACTTCAGG------TGGTCAGTTACAGAGCTGTGCATCATAGCCTTC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8209052 116 - 10857215 ccccatttcgggga---------------------ttttcacagtggacgtgagggtcacaca--------cgactgaagcccgcccgaggagc--------------------------------------------------------------------------------------------aggcaaggt-----------cacttcagg------tggtcagttacagagCTGTGCGTCATAGCCTTC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15602257 116 - 23502949 CCCCATTGcaggga---------------------ttttcacagtggatgtgagggtcacaca--------tgactgaagcccgctcgaggagc--------------------------------------------------------------------------------------------aggcgaggt-----------cacttcaag------tggtcagttacagagcagTGAGTCATAGCCTTC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169872159 131 + 171630274 -ACCACGTGAGGGAAGAACATGCCCGACGGACGCCATTCCCC----GGTGGGAAGGCCACACG--------TGACTCAAGCCGGTCCGAGCAGC--------------------------------------------------------------------------------------------A-GCGCGGC-----------CACTCTACG------TGGTCAAGGACAGAGCCGGGCTTCATAGCCTTA i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1285117 133 - 2905041 -ACCATCTGAGGGAACAACGTGACTGGTGGATGACATTCCCCA---GGTGGGAAGGTCACACG--------TGACTCAAGCCAGTCCCAGGAGC--------------------------------------------------------------------------------------------AGGCGTGGT-----------CACTTGGGG------TGGTCAAGGACAGAGCCGTGCTTCACAGCCTTA i saiBol1.JH378287 C 0 C 0 s canFam3.chr1 56164256 250 + 122678785 CTTCATTTTGGGGA-AAACATACTTGCTGAGCAA-TACCTACCCCAGGAGTGGTGGGCGTGCAGAGTGGTGAGACCACCGCCGGCCCGATGGGCTGCACCATCTGGCTCATGTGTGATTGTCAAGCTGCCGAATGGTGCACCCACTTAAGTGGTGCTAGCAGCCCACTAAAGATTTACTTATGTAAAAACTTGGTTCAAAATACAACATTTGAggggcacctgggtagttcagtagttgagcatc--tgccttt i canFam3.chr1 C 0 C 0 e otoGar3.GL873575 10943660 1081 - 12073884 I e aotNan1.NW_018494782v1 1494384 138 - 1813869 I e cebCap1.NW_016107695v1 1241929 140 - 2164891 I e dasNov3.JH569188 553918 618 + 760995 I a score=73898.000000 s hg38.chr6_KB021644v2_alt 96255 31 + 185823 TGGCCCCAGA----------------CAAAATT----CACTCATC----------------------------------------------------------------------TATACA s panTro5.chr6 173547823 31 + 175400573 GGGGCCCAGA----------------CAAAATT----CACTCATC----------------------------------------------------------------------TATACA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171786396 31 + 173848474 GGGGCCCAGA----------------CAAAATT----CACTCATC----------------------------------------------------------------------TATACA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11468630 31 - 12463322 GGGGCCCAGA----------------CAAAATT----CACTCATC----------------------------------------------------------------------TATACA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156293228 31 + 157873769 GGGGCCCAGA----------------TGAAATT----CACTCTTC----------------------------------------------------------------------TATGCA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170323040 31 + 172585720 GGGGCCCAGA----------------CGAGATT----CACTCATG----------------------------------------------------------------------TACACA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169068600 31 - 170955103 GGGGCCCAGA----------------CGAGATT----CACTCATC----------------------------------------------------------------------TACACA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8355048 31 + 10161646 GGGGCCCAGA----------------CGAGATT----CACTCATC----------------------------------------------------------------------TACACA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1385923 31 + 3144229 GGGACCCAGA----------------CGAGATT----CACTCATC----------------------------------------------------------------------TACACA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96664211 31 + 98384682 GGGACCCAGA----------------CGAGATT----CACTCATC----------------------------------------------------------------------TACACA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8209168 31 - 10857215 GGGACCCAGA----------------CGAGATT----CACTCATC----------------------------------------------------------------------TACACA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15602373 31 - 23502949 GGGGCCCAGA----------------TGAGATT----CACTCATC----------------------------------------------------------------------TACACA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169872290 5 + 171630274 GCAGC-------------------------------------------------------------------------------------------------------------------- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1285250 5 - 2905041 GCAGC-------------------------------------------------------------------------------------------------------------------- i saiBol1.JH378287 C 0 C 0 s canFam3.chr1 56164506 119 + 122678785 gg--cccagggcatgatccccggtcccgagattgagcccctcatcgggctccccgcagggagcctgcttctctctctgcctgtgtctctgcctctctgtgtgtgtctctcacaaataaata i canFam3.chr1 C 0 I 10 s dasNov3.JH569188 554536 30 + 760995 -TAGCCTCAA----------------TGAAGTT----CACTAATA----------------------------------------------------------------------CATAAA i dasNov3.JH569188 I 618 C 0 e otoGar3.GL873575 10943660 1081 - 12073884 I e aotNan1.NW_018494782v1 1494384 138 - 1813869 I e cebCap1.NW_016107695v1 1241929 140 - 2164891 I a score=1450167.000000 s hg38.chr6_KB021644v2_alt 96286 143 + 185823 TTTGCTTGAAAATGCATTA-TTTGATATTCATTTTGTATAC-----TTAAATACAAAATGAAA-TGTAACCTGATATTGAAAATAAAAACTCCA-GGCAACGTCTACATTTCTAT----GTATTTAGTCTTTTCAAGGTCTACATTTTAAAAGCA s panTro5.chr6 173547854 142 + 175400573 TTTGCTTGAAAATGCATTA-TTTG-TATTCATTTTGTATAC-----TTAAATACAAAATGAAA-TGTAACCTGATATTGAAAATAAAAACTCCA-GGCAACGTCTACGTTTCTAT----GTATTTAGTCTTTTCAAGGTCTACATTTTAAAAGCA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171786427 142 + 173848474 TTTGCTTGAAAATGCATTA-TTTG-TATTCATTTTGTATAC-----TTAAATACAAAATGAAA-TGTAACCTGATATTGAAAATAAAAACTCCA-GGCAACGTCTACGTTTCTAT----GTATTTAGTCTTTTCAAGGTCTACATTTTAAAAGCA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11468661 143 - 12463322 TTTGCTTGAAAATGCATTA-TTTGATATTCATTTTGTATAC-----TTAAATACAAAATGAAA-TGAAACCTGATATTGAAAATAAAAACTCCA-GGCAACGTCTACATTTCTAT----GTATTTAGTCTTTTCAAGGTCTACATTTTAAAAGCA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156293259 149 + 157873769 TTTGCTTGAAAATGCATTA-TTTGATATTCATTTTGTATACTTAATTTAAATACAAAATGAAA-TGTAACCTGATATTGAAAATAAAAACTCCAGGGCAACGTCTACATTTCTAT----GTATTTAGTCTTTTCAAGGTCTACATTTTAAAAGCA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170323071 150 + 172585720 TTTGCTTGAAAATGCATTATTTTGATATTCATTTTGTATACTTAATTTAAATACAAAATGAAA-TATAACCTGATACTGAAAATAAAAACTCCAGGGCAACACCTACATTTCTAT----GTATTTCATCTTTTCAAGGTCTACATTTTAAAAGCA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169068631 150 - 170955103 TTTGCTTGAAAATGCATTATTTTGATATTCATTTTGTATACTTAATTTAAATACAAAATGAAA-TATAACCTGATACTGAAAATAAAAACTCCAGGGCAACACCTACATTTCTAT----GTATTTCATCTTTTCAAGGTCTACATTTTAAAAGCA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8355079 150 + 10161646 TTTGCTTGGAAATGCATTATTTTGATATTCATTTTGTATACTTAATTTAAATACAAAATGAAA-TATAACCTGATACTGAAAATAAAAACTCCAGGGCAACACCTACATTTCTAT----GTATTTCATCTTTTCAAGGTCTACATTTTAAAAGCA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1385954 150 + 3144229 TTTGCTTGAAAATGCATTATTTTGATATTCATTTTGTATACTTAATTTAAATACAAAATGAAA-TATAACCTGATACTGAAAATAAAAACTCCAGGGCAACACCTACATTTCTAT----GTATTTCGTCTTTTCAAGGTCTACATTTTAAAAGCA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96664242 150 + 98384682 TTTGCTTGAAAATGCATTATTTTGATATTCATTTTGTATACTTAATTTAAATACAAAATGAAA-TATAACCTGATACTGAAAATAAAAACTCCAGGGCAACACCTACATTTCTAT----GTATTTCGTCTTTTCAAGGTCTACATTTTAAAAGGA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8209199 150 - 10857215 TTTGCTTGAAAATGCATTATTTTGATATTTATTTTGTATACTTAATTTAAATACAAAATGAAA-TATAACCTGATACTGAAAATAAAAACTCCAGGGCAACACCTACATTTCTAT----GTATTTCGTCTTTTCAAGGTCTACATTTTAAAAGCA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15602404 150 - 23502949 TTTGCTTGAAAATGCATTATTTTGATATTCATTTTGTATACTTAATTTaaatgcaaaatgaaa-tgtaacctgatactgaaaataaaaaCTCCAGGGCAACACCTACATTTCTAT----GTATTTAGTCTTTTCAAGGTCTACATTTGAAAAGCA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169872295 146 + 171630274 TTTGCTTGAAAATGC---A-TTTGATACTAATTCTCTATGTTTAATTTAAATACAAAATGAAA-TGTATCCTGATGTTGAAAATGTCAACTCCAGGGTAACATCTGCATTCCTGT----GTATTTAGTGTCTTCAGGGTCTACATTTTCAAAATA i calJac3.chr4 C 0 I 1 s saiBol1.JH378287 1285255 148 - 2905041 TTTGCTTG-AAATGCATTA-TTTGATACTAATTCTGTATATTTAATTTAAATACAAAATGAAA-CGTATGCTGATGTTGAAAATGTAAACTCCAGGACGTCGTCTGCATTCCTGC----GTATTTAGTGTCTTCAAGGTCCACATTTTAAAAACA i saiBol1.JH378287 C 0 I 1 s cebCap1.NW_016107695v1 1242069 149 - 2164891 TTTGCTTGAAAATGCATTA-TTTGATACTAATTCTGTGTATTCAATTTAAATACAAAATGAAA-TGTATCCTGATGTTGAAAATGAAAACTCCAGGGCAACGTCTGCATTCCTGC----ATATTTAGTGTCTTCAAGGTCTACATTTTAAAAACA i cebCap1.NW_016107695v1 I 140 I 1 s aotNan1.NW_018494782v1 1494522 149 - 1813869 TTTGCCTGAAAACGCATTA-TTTGACACTAATTCTGTATATTTAATTTAAATACAAAATGAAA-TGTATTCTGATGTTGAAAATGTAAACTCCAGGGCAACGTCTGTGTTCCTGC----GTGTTTAGTGTCTTCAAGGCCTACATTTTAAAAACA i aotNan1.NW_018494782v1 I 138 I 31 s canFam3.chr1 56164635 154 + 122678785 tTTTTTTTTAAATACAACA-TTTGATATTCATTTTATACATTGAATTTAAGTACGAAATAAAATTTTATCCTGAGGTTGAAGATATTAACTCTGGGGCAAGGTCTACATTCCTTTTTTATTACTTGTTTTCTTTAAGGTCTGCATTTTAAAAGTT i canFam3.chr1 I 10 I 1 s dasNov3.JH569188 554566 116 + 760995 CTTTGTTCAAAATACATTA-TTTGAAATTAATGTT-CGCATTTAATTTAGATACAAAATCAAG-TTTATTTTGAGTTTGAAAATATAGTCTCCAGGGC----------------T--------------------AGATTTACAGTTTGGAGGGA i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10943660 1081 - 12073884 I a score=192788.000000 s hg38.chr6_KB021644v2_alt 96429 31 + 185823 AGAAATGAACAAA---GTTAGGAATACATTATTA s panTro5.chr6 173547996 31 + 175400573 AGAAATGAACAAA---GATAGGAATACATTATTA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171786569 31 + 173848474 AGAAATGAACAAA---GATAGGAATACATTATTA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11468804 31 - 12463322 AGAAATGAACAAA---GATAGGAATACATTATTA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156293408 28 + 157873769 AGAAATGAACAAA---GATAGGAATA---TATTA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170323221 28 + 172585720 AGAAATGAACAAA---GATAGGAATA---CATTA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169068781 28 - 170955103 AGAAATGAACAAA---GATAGGAATA---CATTA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8355229 28 + 10161646 AGAAATGAACAAA---GATAGGAATA---CATTA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1386104 28 + 3144229 AGAAATGAACAAA---GATGGGAATA---CATTA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96664392 28 + 98384682 AGAAATGAACAAA---GATAGGAATA---CATTA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8209349 28 - 10857215 AGAAATGAACAAA---GATAGGAATA---CATTA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15602554 28 - 23502949 AGAAATGAACAAA---GATAGGAATA---CATTA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169872442 15 + 171630274 AGAAACGAATAAA---GG---------------- i calJac3.chr4 I 1 C 0 s saiBol1.JH378287 1285404 28 - 2905041 AGAAATGAACAAA---GATAGCAAAA---AGCGA i saiBol1.JH378287 I 1 I 2 s cebCap1.NW_016107695v1 1242219 28 - 2164891 AGAAATGAACAAA---GATAGCAAAA---AGCGA i cebCap1.NW_016107695v1 I 1 I 2 s canFam3.chr1 56164790 28 + 122678785 AGAAAAGAACAAA---GGTAGGAACC---AGTCA i canFam3.chr1 I 1 I 2 s dasNov3.JH569188 554682 23 + 760995 AGGAAAAGACAAACAGGATTGAA----------- i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10943660 1081 - 12073884 I e aotNan1.NW_018494782v1 1494671 31 - 1813869 I a score=2577435.000000 s hg38.chr6_KB021644v2_alt 96460 305 + 185823 CTCTGGCAGGAAAATTAGACGGATTG------ATGAAgtgggttctgtctattgttatttatcctactagaaatta-aacta--------------------------------------------aaaaaactt--aaaatgtttttattctttaattaaaagcacaatagtaaatccattac----atgccaacataaataacgt-gtaatg---aaaaataaatgtaatttttgaaccaaaccatcttgactgacaagagt--gctatactttc-----tattgc---aaatccagtgtc-tgacttcccggaaggcagccagagtctgaggcc-actcccgcactccatctgtgt-----gggttt-------gaagtgtgcagtg s panTro5.chr6 173548027 305 + 175400573 CTCTGGCAGGAAAATTAGACGGATTG------ATGAAgtgggttctgtctattgttatttatcctactagaaatta-aacta--------------------------------------------aaaaaactt--aaaatgtttttattctttaattaaaagcacaatagtaaatccattac----atgccaacataaataacgt-gtaatg---aaaaataaatgtaatttttgaaccaaaccatcttgactgacaagagt--gctatactttc-----tattgc---aaatccagtgtc-cgacttcccagaaggcagccagagtctgaggcc-actcccgcactccatctgtgt-----gggttt-------gaagtgtgcagtg i panTro5.chr6 C 0 C 0 s panPan2.chr6 171786600 305 + 173848474 CTCTGGCAGGAAAATTAGACGGATTG------ATGAAgtgggttctgtctattgttatttatcctactagaaatta-aacta--------------------------------------------aaaaaactt--aaaatgtttttattctttaattaaaagcacaatagtaaatccattac----atgccaacataaataacgt-gtaatg---aaaaataaatgtaatttttgaaccaaaccatcttgactgacaagagt--gctatactttc-----tattgc---aaatccagtgtc-cgacttcccagaaggcagccagagtctgaggcc-actcccgcactccatctgtgt-----gggttt-------gaagtgtgcagtg i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11468835 301 - 12463322 CTCTGGCAGGAAAATTAGACGGATTG------ATGAAgtgggttctgtctattgttatttatc---ctagaaatta-aact---------------------------------------------gaaaaactt--aaaatgtttttattctttaattaaaagcacaagagtaaatccattac----atgccaacataaataacga-gtaatg---aaaaataaatgtaatttttgaaccaaaccatcttgactgacaagagt--gctatactttc-----tactgc---aaatccagtgtc-cgacttcccggaaggcagccagagtccgaggcc-actcccgcactccatctgtgt-----gggttt-------gaagtgtgcagtg i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156293436 300 + 157873769 CTCTGGCAGGAAAATTACACAAATTG------ATAAAgtgggttctgtctattgttatttatcctactagaaatta--------------------------------------------------aaaaaactt--aaaatgttctcattctttaattaaaaacacaatagtaaacccattac----atgccaagataaataacgt-gtaatt---aaaaataaatgtaatttttgaaccaaatcatcttgactgacaagagt--gctatactttc-----tattgc---aaatccagtgtc-cgacttccgggaaggcagccagagtctgaggcc-acccttgcactctatctgtgt-----gggttt-------gaagtgtgcagtg i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170323249 306 + 172585720 CTCTGGCAGGATAATCAGACGAACGG------ATAAAgtgggttgtgtctcttgttatttatcctactagaaatta-aacta--------------------------------------------gaaaaactt-taaaatgttttcactctttaattaaaaacacaatagtaaacccattcc----atgccaacataaatagcgt-gtaatg---aaaaatccatgtaatttttgaaccaaaccatcttgactaacaagagt--gttatactttc-----ctttgc---aaatccagtgtc-tgacctcccggaaggcagccagagtctcaggcc-actcccctactccacctgtgt-----gggtgt-------gaagtgtgcagtg i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169068809 306 - 170955103 CTCTGGCAGGATAATCAGACGAACGG------ATAAAgtgggttgtgtctcttgttatttatcctactagaaatta-aacta--------------------------------------------gaaaaactt-taaaatgttttcactctttaattaaaaacacaatagtaaacccattcc----atgccaacataaatagcgt-gtaatg---aaaaatccatgtaatttttgaaccaaaccatcttgactaacaagagt--gttatactttc-----ctttgc---aaatccagtgtc-tgacctcccggaaggcagccagagtctcaggcc-actcccctactccacctgtgt-----gggtgt-------gaagtgtgcagtg i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8355257 306 + 10161646 CTCAGGCAGGATAATCAGACGAACGG------ATAAAgtgggttgtgtctcttgttatttatcctactagaaatta-aacta--------------------------------------------gaaaaactt-taaaatgttttcactctttaattaaaaacacaatagtaaacccattcc----atgccaacataaatagcgt-gtaatg---aaaaatccatgtaatttttgaaccaaaccatcttgactaacaagagt--gttatactttc-----ctttgc---aaatccagtgtc-tgacctcccggaaggcagccagagtctcaggcc-actcccctactccacctgtgt-----gggtgt-------gaagtgtgcagtg i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1386132 307 + 3144229 CTCTGGCAGGAAAATCAGACGAACGG------ATAacgtgggttgtgtctcttgttatttatcctactagaaatta-aacta--------------------------------------------gaaaaactt-aaaaatgttttcactctttaattaaaaacacaatagtaaacccattcc----atgccaacataaatagcgt-gtaatg--aaaaaatccatgtaatttttgaaccaaaccatcttgactgacacgagt--gttatactttc-----ctttgc---agatccagtgtc-tgacctcccggaaggcagccagagtctcaggcc-actcctgcactccacctgtgt-----gggtgt-------gaagtgtgcagtg i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96664420 305 + 98384682 CTCTGGCAGGAAAATCAGACGAACGG------ATAAAgtgggttgtgtctcttgttatttatcctactagaaatta-aacta--------------------------------------------gaaaaactt-aaaaatgttttcactctttaattaaaaacacaatagtaaacccattcc----atgccaacataaatagcgt-gcaatg--aaaaaatccatgtaatttttgaaccaaaccatcttgactgacacgagt--gttatactttc-----ctttgc---agatccagtgtc-tgacctcccggaaggcagccagag--tcaggcc-actcccccactccacctgtgt-----gggtgt-------aaagtgtgcagcg i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8209377 309 - 10857215 CTCTGGGAGGAAAATCAGACGAACGG------ATAacgtgggttgtgtctcttgttatttatcctactagaaatta-aacta--------------------------------------------gaaaaactt-aaaaatgttttcactctttcattaaaaacacaatagtaaacccattcc----atgccaacataaatagcgt-gtaatgaaaaaaaatccatgtaatttttgaacctaaccatcttgactgacacgagt--gttatagtttc-----ctttgc---agatccagtgtc-tgacctcccggaaggcagccagggtctcaggcc-actcctgcactccacctgtgt-----gggtgt-------gaagtgttcagtg i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15602582 306 - 23502949 CCCTGGCAGGAAAATCAGACGAATGG------ATAAAgtgggttgtgtctcttgttatttatcctactagaaatta-aacta--------------------------------------------gaaaaactt-aaaaatgtttttactctttaattaaaaacacaatagtaaacccattcc----atgccaaaataaatagcgt-gtaatg---aaaaatccatgtaatttttgaaccaaaccatcttgactgacaagagt--gttatactttc-----ctttgc---aaatccagtgtc-tgacctcccggaaggcagccagagtctcaggcc-actcccgcactccacctgtgt-----gggtgt-------gaagtgtgcagtg i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169872457 305 + 171630274 ----------------AGAT--------------AAAGTGGGTTATGTC---TGTTGCTTGTCCTACTGGAAATTA-AACTAAAATACCTGAAAAATGTTTTTATTCTCttgtcctactagaaattaaaatacctgaaaaatgtttttattctttaatttaaaacacaat-gaaaacccatcac----atgccaacataaataacgt-gtaatg---aaaaagaaatataattctcaaaccaaaccatcttgaatgacaagagt--gctgtgctttc-----catggc---aaatccagcatc-cagcttcctggaagccggcg-gagccccaggcc-gccc-tgcactctgtc----------------------------tgtGAGTG i calJac3.chr4 C 0 I 2649 s saiBol1.JH378287 1285434 290 - 2905041 CTGTGGCAGGAAAGTTAGATGAATTG------GCAAAgtgggttatgtctattgttgtttaccctactagaaatta-aacta--------------------------------------------aaaaaacctaaaaaacattttcaatctttaattaaaaacacaatagaaaacccattac----atgccaacataaataacgt-gtaatg---aaaaagaaatacaattctcgaaccaaaccgtcttgaatgacaagagt--gctgtgctttc-----tggggc---aaatccagcgtc-cagcttcctggaagccggcc-gagtcccaggcc-gcccacgccatccgtc----------------------------tgtgagtg i saiBol1.JH378287 I 2 I 62 s cebCap1.NW_016107695v1 1242249 305 - 2164891 CTGTGGCAGGAAAGTTAGATGAAttg------gttaagtggtttatgtctattgttgtttatcctactagaaatta-aacca--------------------------------------------agaaaacctaaaaaacgtttttaatctttaattaaaaacacaatagaaagcccattac----atgccaacataaataacgt-gtaatg----aaaagaaatataattctagaaccaaaccatcttgaacgacaagagt--gctgtgctttc-----catggc---aaatccagcgtc-cagcttcctggaagctggcc-gagtcccaggcc-gcccacgcagtctgtctgtga-----gtgtgt-------gacgtccggagtc i cebCap1.NW_016107695v1 I 2 I 46 s aotNan1.NW_018494782v1 1494702 283 - 1813869 CTGTGGCAGGAAAGTTGGATGAAttg------atcaagtgggttatgtctattgttgtttatcctgctagaaatta-aacta--------------------------------------------aaaaaacctaa-----------------------aaaacacaatagaaaacccattac----atgccaacatgaataacgt-gtaatg---aaaaagaaatataattctcaaaccaaaccatcttgaatgacaagagt--gctgtgctttc-----cacggc---aaatccagcgtc-cagcttcctggaagtcggcc-gagtcccaggcc-acccacgcagtccgtctgtga-----gtgtgt-------gacgtccggagtc i aotNan1.NW_018494782v1 I 31 I 46 s canFam3.chr1 56164820 307 + 122678785 CTGTAGTGGGAAAGT-----GAATTG------ATAGAGTACgctgtaccttttgatatttatcctatcagaaactaaaactg--------------------------------------------aagaggttt-taaagc---------------ttaaaagcacattaatcaacccatttcttatttgtcaacatgagtaacgt-ttaatg---aaaaataaatgtaattttcaagccaaacaatcgttagtggcaagagctggcgttacttca-----cattgctcacaatccagag---cgggcttgcagaaggcagccagggtctcccacctgccctcgtgttaagtctgtgtcgataggatgttttgatcgaagtgtgcaaag i canFam3.chr1 I 2 C 0 s dasNov3.JH569188 554705 268 + 760995 -----AAAGGGAAATTTAAAGAATCAAtatttataaagtgggttg-atctattgacagttacc-----agaagttaaaactg--------------------------------------------aagatattt-tgaaatgtttttattttttcacttaaaa-acaacaataaacgcattgc----atgacatgataaataacatctttatg---aaaaagaaatatagttttcaaaacaaact------agtgacaagaat--ggcaggcttttacatattttgt---aaatctgatgtcattacattttgata--------tgatgttagggc-a--------------------------------------gaaatatacaaag i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10943660 1081 - 12073884 I a score=953999.000000 s hg38.chr6_KB021644v2_alt 96765 107 + 185823 aatactcagtgtcactcccaaatgtat-taggaaagaggagattattttaataacctt-tcctaggtaatt-gtggtgattct---ttgataccacccccaagccccaaaggt s panTro5.chr6 173548332 107 + 175400573 aatacttagtgtcactcacaaatgtat-taggaaagaggagattattttaataacctt-tcctaggtaatt-gtggtgattct---ttgataccacccctaagccccaaaggt i panTro5.chr6 C 0 C 0 s panPan2.chr6 171786905 107 + 173848474 aatacttagtgtcactcacaaatgtat-taggaaagaggagattattttaataacctt-tcctaggtaatt-gtggtgattct---ttgataccacccctaagccccaaaggt i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11469136 106 - 12463322 aatactcagtgtcactcacaaatgtat-taggaaagaggagattattttaataacctt-tcctaggtaatt-gtggtgattct---ttgataccacccc-aagccccaaaggt i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156293736 107 + 157873769 aatactttgtgtcactcacaaatgtat-taggaaagaggagattattttaataacctt-tcctaggtaatt-gtggttattct---tcgatatcacccccaagccccaaaggt i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170323555 107 + 172585720 aatactcagtgtcactcacaaatgtat-tagaaaagaggaggttattttattaacctt-tcctaggtaatt-gtggttgttct---tcgataccacccccaagccccaaagat i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169069115 107 - 170955103 aatactcagtgtcactcacaaatgtat-tagaaaagaggaggttattttattaacctt-tcctaggtaatt-gtggttgttct---tcgataccacccccaagccccaaagat i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8355563 107 + 10161646 aatactcagtgtcactcacaaatgtat-tagaaaagaggaggttattttattaacctt-tcctaggtaatt-gtggttgttct---tcgataccacccccaagccccaaagat i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1386439 107 + 3144229 aatactcagtgtcactcacaaatgtat-tagaaaagaggaggttattttattagcctt-tcctaggtaatt-gtggttgttct---tcgataccacccccaagccccaaaggt i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96664725 107 + 98384682 aatactcagtgtcactcacaaaagaat-tagaaaagaggaggttattttattaacctt-tcctaggtaatt-gtggttgttct---tcgataccacccccaagccccaaaggt i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8209686 107 - 10857215 aatactcagtgtcactcacaaatgtat-tagaaaagaggaggttattttattaacctt-tcctaggtaatt-gtggttgttct---ttgataccacccccaaaccccaaagat i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15602888 107 - 23502949 aatactcagtgtcactcacaaatgtat-tagaaaagaggaggttattttattaacctt-tcctaggtaatt-gtggttgttct---tcgataccacccccaagccccaaaggt i colAng1.NW_012114488v1 C 0 C 0 s saiBol1.JH378287 1285786 107 - 2905041 aatactcagcgtcactcacgcgtggat-taggaaagaggagatgattttaataacctt-ccccagataact-gtggttattct---ttgataccatccccaagtcccaaaggt i saiBol1.JH378287 I 62 C 0 s cebCap1.NW_016107695v1 1242600 107 - 2164891 aatactcactgtcactcacacatggat-taggaaagagaagattattttaataacctt-cgccagataatt-gtggttattct---ttgataccatccccaagccccaaaggt i cebCap1.NW_016107695v1 I 46 I 1671 s aotNan1.NW_018494782v1 1495031 106 - 1813869 aatactcagtgtcactcacacatgcat-taggaaagagg-gattattttaataacctt-ccccagataatt-gtggttattct---ttgataccatccccaagccccaaagct i aotNan1.NW_018494782v1 I 46 C 0 s canFam3.chr1 56165127 100 + 122678785 aatatcaagcatccttcagatacatagacaggagagggaggattattttaaaaaaattagcccaggaaactggctattgttct---ctgg---------caggtcctgtggt- i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 554973 106 + 760995 aatatccattgtcattcataaatacag-tcagaaagggagatttattttactagtctt---ctcagacatt-gtgaatatttttgcttgactcttccccaaagctcaaagt-- i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10943660 1081 - 12073884 I e calJac3.chr4 169872762 2649 + 171630274 I a score=2137096.000000 s hg38.chr6_KB021644v2_alt 96872 320 + 185823 ------------ggtagcttcttaaaggtgcgctgttgtgtgggatctg--agccctattg---------cctgggcatgcacctg----cccctgtgtcggcatccatgggcccgtggcac------cgcagatggtcttcgcttgctcgtcactttataccatcccgca--------gtgga-------aacaatcagctcactgagt--tctgca-------------------------------gatcttccaaatgttgacacttctcactacacaata--taaaaagcat--ttct-gttgacctccccacagatgtcctcaaaa----caccct-------ttaagccagtgacaggctcacaga--gggagacacaaggtctttgggattgtcactttcatagtgatgct s panTro5.chr6 173548439 320 + 175400573 ------------ggtagcttcttaaaggtgtgctgttgtgtgggatctg--agccctattg---------cctgggcacgcacctg----cccctgtgtcggcatccacgggcccgtggcac------catggatggtcttcgcttgctcgtcactttataccatcccgtg--------gtgga-------aacaatcagcttaccgagt--tctgca-------------------------------gatcttccaaatgttgacacttctcactactcaata--taaaaagcat--ttct-gttgacctccccacagatctcctcaaaa----caccct-------ttaagccagtgacaggctcacaga--gggagacacaaggtctttgggactgtcactttcatagtgatgct i panTro5.chr6 C 0 C 0 s panPan2.chr6 171787012 320 + 173848474 ------------ggtagcttcttaaaggtgtgctgttgtgtgggatctg--agccctattg---------cctgggcacgcacctg----cccctgtgtcggcatccacgggcccgtggcac------catggatggtcttcgctcgctcgtcactttataccatcccgtg--------gtgga-------aacaatcagcttaccaagt--tctgca-------------------------------gatcttccaaatgttgacacttctcactactcaata--taaaaagcat--ttct-gttgacctccccacagatctcctcaaaa----caccct-------ttaagccagtgacaggctcacaga--gggagacacaaggtctttgggactgtcactttcatagtgatgct i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11469242 319 - 12463322 -------------gtagcttcttaaagatgcgctgttgtgtgggatctg--agccctattg---------cctcggcatggacctg----cccctgtgtcggcatccacgggcccgtggcac------tgcagatggtcttcgctcgctcgtcactttataccatcccgtg--------gtgga-------aacaatcagctcactgagt--tctgca-------------------------------gatcttccaaatgttgacacttctcactacacaata--taaaaagcat--ttct-gttgacctccccacagatctcctcaaaa----caccct-------ttaagccagtgacaggctcacaga--gggagacacaaggtctttgggattgtcactttcatagtgatgct i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156293843 320 + 157873769 ------------ggtagcttcttaaagatgcaccgccgtgtgggatctg--agccctcctg---------cctgggcacgcacctg----cccctgcgtcggcatccacgggcccatggcac------cgcag-tggtcttc-ctcgcttgtcactttgtaccatcctgcg--------gtgga-------aacaaacagctcactgagt--tctgca-------------------------------gatcttccgaatgttgacacttctcactacacaata--tagaaagcat--tttt-gttaacctccccacagatctcctcaaaa----caccct-------ttaagccagtgacaggctcacagacggagagacacaaggtctttggaattgtcactttcacagtgatgct i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170323662 318 + 172585720 ------------ggtaacttcttaaaggtgtgtcgtcttgtaggatctg--agccctcctg---------cctgggcacgcacctg----cccctgcgtcgaaatccacaggcccgtggcac------catgg-tggttttcacttgctcgtcactttgtaccatcctgtg--------gtaga-------aacaatcagcttactgagt--tctgca-------------------------------gatctcccaaatgttgacacttctcactacacaata--taaaaagcat--tttt-gttaacttccccacagatctcctcagaa----caccct-------ttaagccactgacaggcttacaga--gggagatacaaggtcttt-gaattgccactttcacagtgatgct i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169069222 318 - 170955103 ------------ggtaacttcttaaaggtgtgtcgtcttgtaggatctg--agccctcctg---------cctgggcacgcacctg----cccctgcgtcgaaatccacaggcccgtggcac------catgg-tggttttcacttgctcgtcactttgtaccatcctgtg--------gtaga-------aacaatcagcttactgagt--tctgca-------------------------------gatctcccaaatgttgacacttctcactacacaata--taaaaagcat--cttt-gttaacttccccacagatgtcctcagaa----caccct-------ttaagccactgacaggcttacaga--gggagatacaaggtctct-gaattgtcactttcacagtgatgct i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8355670 318 + 10161646 ------------ggtaacttcttaaaggtgtgtcgtcttgtaggatctg--agccctcctg---------cctgggcacgcacctg----cccctgcgtcgaaatccacaggcccgtggcac------catgg-tggttttcacttgctcgtcactttgtaccatcctgtg--------gtaga-------aacaatcagcttactgagt--tctgaa-------------------------------gatctcccaaatgttgacacttctcactacacaata--taaaaagcat--tttt-gttaacttccccacagatctcctcagaa----caccct-------ttaagccactgacaggcttacaga--gggagatacaaggtcttt-gaattgtcactttcacagtgatgct i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1386546 319 + 3144229 ------------ggtaacttcttaaaggtgccccgtcgtgtggcatctg--agccctcctg---------cctgggcatgcacctg----cccctgcgtcgaaatccacaggcccgtggcac------caggg-tggttttcactcgctcgtcactttgtaccatcctgtc--------gtaga-------aacaatcagcttactgagt--tctgca-------------------------------gatctcccaaatgttgacacttctcactatacaata--taaaaagcat--tttt-gttaacctccccacagatctcctcagaa----caccct-------ttaagccactgacaggcttccaga--gggagatacaatgtctttggaattgtcactttcacagtgatgca i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96664832 319 + 98384682 ------------ggtaacttcttaaaggtgccctgtcgtgtgggatctg--agccctcctg---------cctaggcacgcacctg----cccctgcgtcgaaatccacaggcccatggcac------caggg-tggttttcactcgctcatcgctttgtaccatcctgtg--------gtaga-------aacaatcagcttactgagt--tctgca-------------------------------gatctcccaaatgttgacgcttctcactatacaata--taaaaagcat--tttt-gttaacctccccacagatctcctcagaa----caccct-------ttaagccactgacaggcttccaga--gggagatacaaggtctttggaattgtcactttcacagcgatgct i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8209793 319 - 10857215 ------------ggtaacttcttaaaggtgtgtcgtcttgtaggatctg--agccctcctg---------cctgggcacgcccttg----cccctgcgtcgaaatccacaggcccgtggcac------catgg-tgattttcacttgctcgtcactttgtaccatcctgtg--------gtaga-------aacaatcagcttactgagt--tctgca-------------------------------gatctcccaaatgttgacacttctcactatacaata--taaaaagcat--tttt-gttaacctccccacagatctcctcagaa----caccct-------ttaagccactgacaggcttccaga--gggagatacaatgtcttcggaattgtcactttcacagtgatgca i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15602995 319 - 23502949 ------------ggtaacttcttacaggtgtgccgtcttgtgggatctg--agccctcctg---------cctgggcacgcacctg----cccctgcgtcaaaatccacaggcccatggcac------cgcgg-tggttttcactcgctcgtcactttgtaccatcctgtg--------ttaga-------aacaatcagcttactgagt--tctgca-------------------------------gatctcccaaatgttgacacttctcactatacaata--tgaaaagcat--tttt-gttaatctccccacagatctcctcagaa----caccct-------ttaagccactgacaggctcacaga--gggagatacaaggtctttggaattgtcactttcacagtgatgct i colAng1.NW_012114488v1 C 0 C 0 s saiBol1.JH378287 1285893 314 - 2905041 ------------agaagcttgctacagttgtgcctcggagtgggatctg--ag-cctcctg---------ctgggacacgcacct-----tccctgcgctgacagccaggagccccgggcag------ctccg-aggcctctgctcgctggtcactgtgcaccatcctgca--------gtgga-------aacc-tcagcttacttagc--tctgca-------------------------------gatcttcgaaatgttgacacttctcaccaca-aata--taaaaagcat--tt-g-gcttacctgctcacaggtcttatcagga----cacact-------tcaagttggtgacaggctcacaga--gggagatatgaggtctttgggattgtcacttccaccgtgatgct i saiBol1.JH378287 C 0 C 0 s aotNan1.NW_018494782v1 1495137 315 - 1813869 ------------agaagcttgctacagttgtgcctcggagtgggatctg--ag-cctcctg---------ctgggacacgcacct-----tccctgcgctgacatccaggggccccgggcac------cgcag-cggcctctgcttgctggtcactgtgtaccatcttgca--------gcgga-------aaccatcagcttacttagc--tctgca-------------------------------gatcttcgaaatgttgacacttctcactaca-aata--taaaaagcat--tt-g-gcttacctgcccacaggtcttatcagga----caccct-------ttaagccggtgacaggctcacaga--gggagatatgaggtctttggagttgtcacttccacggtgatgct i aotNan1.NW_018494782v1 C 0 I 1414 s canFam3.chr1 56165227 319 + 122678785 ------------agtagtttcctgaaagtgagctgcacttggggacctggaagcccccaagttggaaggtctgggttctgcatttg----cctcatcg-----acctgctgcaccatgtgag------cacac-ctgttccccct---gcgtcacattacagcatcatgca--------tggaacttccagaaatatcggtccattgaggtatatgca-------------------------------ggtcttccaaacatcatcaggtctcattcaaccttc--tgttcagaatcgtttt-gttaacgtcaccaccgct---accagaaaactcaccga-------tggggcggctggcaggcttacaggccagaagctcca-----------------gttttcactcggatgct i canFam3.chr1 C 0 I 5 s dasNov3.JH569188 555079 384 + 760995 tttaagaaaccccaaagtttcttaaagattagccacaacgtggaaacta--aaaccatatg---------catggtcttg---ttgaaatcttcttcattaaaatgcccttgtctgtctcacattttaaacgg-atcttttc-cctatgcatgaatttataatgatgtgcatcattaatttaga-------aaataccagttcactgagt--tatgtcagtgagctgatattttccaatagtttggaatgatcttccaaacagtcacaaattgcattaaacaatacgtaagcatcat--ttttcatcagtatcaccattgacatgatcagaa----aactttctatgtgttgggcaaccatcaagctcttgat--aatatatacaa-atatccaaaattttaatttttcca-tcaggct i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10943660 1081 - 12073884 I e cebCap1.NW_016107695v1 1242707 1671 - 2164891 I e calJac3.chr4 169872762 2649 + 171630274 I a score=895291.000000 s hg38.chr6_KB021644v2_alt 97192 150 + 185823 -----tgaatttttatcataggcaacaaaaactgtcagccgtcatccttgaaatgacagactc----cctcatttttgagaaa-----tgtctgc-cagttctagttcccaagtctgaatgacc-agggctggcaggtcggtcatggtcttaagtaaccgtg--gtga s panTro5.chr6 173548759 154 + 175400573 -----tgaatttttatcataggcaacaaaaactgtcagccgtcatccttgaaatgacagactcacttcctcatttttgagaaa-----tgtctgc-cagttctagttcccaagtctgaatgacc-agggctgggaggttggtcatggtcttaagtaaccgtg--gtga i panTro5.chr6 C 0 C 0 s panPan2.chr6 171787332 154 + 173848474 -----tgaatttttatcataggcaacaaaaactgtcagccgtcatccttgaaatgacagactcacttcctcatttttgagaaa-----tgtctgc-cagttctagttcccaagtctgaatgacc-agggctgggaggttggtcatggtcttaagtaaccgtg--gtga i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11469561 155 - 12463322 -----tgaatttttatcataggcaacaaaaactgtcagccgtcatccttgaaatgacagactcacttcctcatttttgagaaa-----tgtctgc-cagttcctgttcccaagtctgaatgaccaagggctggcaggtcggtcatggtcttaagtaacagtg--gtga i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156294163 154 + 157873769 -----tgaatttttatcataggcaataaaaactgtcagccatcatctttgaaatgacagactcacttcctcatttttgagaaa-----tatctgc-cagttccagttcccaagtctgaacgacc-agggctggcaggtcagtcaccgtcttcagtaaccgtg--gtga i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170323980 139 + 172585720 -----tgaatttttatcatagacaacaaaaactgtcagccgtcatccttgaaaagacagactcacttcctcatttttgagaaa-----cgtctgc-ca------gttcccgagtctgaacgacc-agggctggcaggtcggtcatggtcttaagtaa----------- i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169069540 139 - 170955103 -----tgaatttttatcatagacaacaaaaactgtcagccgtcatccttgaaaagacagactcacttcctcatttttgagaaa-----cgtctgc-ca------gttcccgagtctgaacgacc-agggctggcaggtcggtcatggtcttaagtaa----------- i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8355988 139 + 10161646 -----tgaatttttatcatagacaacaaaaactgtcagccgtcatccttgaaaagacagactcacttcctcatttttgagaaa-----cgtctgc-ca------gttcccgagtctgaacgacc-agggctggcaggtcggtcatggtcttaagtaa----------- i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1386865 139 + 3144229 -----tgaatttttatcataggcaacaaaaactgtcagctgtcatccttgaaaagacagactcacttcctcatttttgagaaa-----cgtctgc-ca------gttcccgagtctgaacgacc-agggctggcaggtcggtcatggtcctaagtaa----------- i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96665151 139 + 98384682 -----tgaatttttatcatagacaacaaaaactgtcagccatcatccttgaaaagacagactcacttcctcatttttgagaaa-----cgtcttt-ca------gttcccgagtctgaacgaac-agggctggcaggtcggtcatggtcttaagtaa----------- i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8210112 139 - 10857215 -----tgaatttttatcataggcaacaaaaactgtcagccgtcatccttgaaaagacagactcacttcctcatttttgagaaa-----catctgc-ca------gttcccgagtctgaacgacc-agggctggcaggtcggtcatggtcctaagtaa----------- i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15603314 139 - 23502949 -----tgaatttttatcataggcaacaaaaactgccagccatcatccttgaaaagacagactcacttcctcgtttttgagaaa-----cgtctgc-ca------gttcccgagtctgaacgacc-agggctggcaggtcggtcatggtcttaagtaa----------- i colAng1.NW_012114488v1 C 0 C 0 s saiBol1.JH378287 1286207 148 - 2905041 -----taggtttttaccacaggcagcggaaactgctatccgtcacccttgaaaagacaggctcacttcctca-ttctgagaaa-----cgtctgtgcc------gttcccaagtcctgatgacc-agggcttgcaggtcagtcgtggtcttcagtacccagg--gtga i saiBol1.JH378287 C 0 C 0 s canFam3.chr1 56165551 128 + 122678785 -----tgtacctt----------ggcaagtattg-------tagtcctggaaaagacag--tcacctcctcgtttttgagaaag----tgtctgc-ctg-----attcccaagtccgagtcatc-agagtttgtctgtcgatttt--tcttacagaacctcg-tgt-- i canFam3.chr1 I 5 C 0 s dasNov3.JH569188 555463 150 + 760995 caaaggggattgat------ggcaataaacactgtcacttgtt-tccttgaaatgagaggctcgcttactc--ctttgagacaatctttgtctgc-ctc-----attcccaagtctgaataacc-agcatttttctgtcagtcattaatttaagtaaagatggtgt-- i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10943660 1081 - 12073884 I e aotNan1.NW_018494782v1 1495452 1414 - 1813869 I e cebCap1.NW_016107695v1 1242707 1671 - 2164891 I e calJac3.chr4 169872762 2649 + 171630274 I a score=63584.000000 s hg38.chr6_KB021644v2_alt 97342 8 + 185823 cccatgGG s panTro5.chr6 173548913 8 + 175400573 cccatgGG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171787486 8 + 173848474 cccatgGG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11469716 8 - 12463322 cccatgGG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156294317 8 + 157873769 cccatgGG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170324119 7 + 172585720 -CCATAGG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169069679 7 - 170955103 -CCATAGG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8356127 7 + 10161646 -CCATAGG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1387004 7 + 3144229 -ccatggG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96665290 7 + 98384682 -CCATAGG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8210251 7 - 10857215 -ccatggG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15603453 7 - 23502949 -ccatggG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169875411 8 + 171630274 CCTGTGGG i calJac3.chr4 I 2649 C 0 s saiBol1.JH378287 1286355 8 - 2905041 cccacggg i saiBol1.JH378287 C 0 C 0 s otoGar3.GL873575 10944741 8 - 12073884 CTCACTGG i otoGar3.GL873575 I 1081 C 0 s canFam3.chr1 56165679 8 + 122678785 cccctgga i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 555613 8 + 760995 tctgtgag i dasNov3.JH569188 C 0 I 7065 e aotNan1.NW_018494782v1 1495452 1414 - 1813869 I e cebCap1.NW_016107695v1 1242707 1671 - 2164891 I a score=6011.000000 s hg38.chr6_KB021644v2_alt 97350 1 + 185823 A s panTro5.chr6 173548921 1 + 175400573 A i panTro5.chr6 C 0 C 0 s panPan2.chr6 171787494 1 + 173848474 A i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11469724 1 - 12463322 A i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156294325 1 + 157873769 A i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170324126 1 + 172585720 A i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169069686 1 - 170955103 A i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8356134 1 + 10161646 A i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1387011 1 + 3144229 A i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96665297 1 + 98384682 A i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8210258 1 - 10857215 A i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15603460 1 - 23502949 A i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169875419 1 + 171630274 G i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1286363 1 - 2905041 a i saiBol1.JH378287 C 0 I 4583 s otoGar3.GL873575 10944749 1 - 12073884 T i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56165687 1 + 122678785 a i canFam3.chr1 C 0 I 1 e aotNan1.NW_018494782v1 1495452 1414 - 1813869 I e cebCap1.NW_016107695v1 1242707 1671 - 2164891 I e dasNov3.JH569188 555621 7065 + 760995 I a score=36933.000000 s hg38.chr6_KB021644v2_alt 97351 4 + 185823 GGAA s panTro5.chr6 173548922 4 + 175400573 GGAA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171787495 4 + 173848474 GGAA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11469725 4 - 12463322 GGAA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156294326 4 + 157873769 GGAA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170324127 4 + 172585720 GGAA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169069687 4 - 170955103 GGAA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8356135 4 + 10161646 GGAA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1387012 4 + 3144229 GGAA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96665298 4 + 98384682 GGAA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8210259 4 - 10857215 GGAA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15603461 4 - 23502949 GGAA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169875420 4 + 171630274 GGAG i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1244378 4 - 2164891 GGAG i cebCap1.NW_016107695v1 I 1671 C 0 s otoGar3.GL873575 10944750 4 - 12073884 GGGG i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56165689 3 + 122678785 gga- i canFam3.chr1 I 1 I 4699 s dasNov3.JH569188 562686 4 + 760995 GGAA i dasNov3.JH569188 I 7065 C 0 e saiBol1.JH378287 1286364 4583 - 2905041 I e aotNan1.NW_018494782v1 1495452 1414 - 1813869 I a score=331828.000000 s hg38.chr6_KB021644v2_alt 97355 42 + 185823 CTGC-------CTGTGATCCCTGAG----------TTTCCATAGCCCTAAATTATTGTA s panTro5.chr6 173548926 42 + 175400573 CTGC-------CTGTGATCCCCGAG----------TTTCCATAGCCCTAAATTATTGTA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171787499 42 + 173848474 CTGC-------CTGTGATCCCCGAG----------TTTCCATAGCCCTAAATTATTGTA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11469729 42 - 12463322 CTGC-------CTATGATCCCCGAG----------TTTCCATAGCCCTAAATTATTGTA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156294330 42 + 157873769 CTGC-------CTGTGATCCCCGAG----------TTTCCATAGCCCTAAATTATTGTA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170324131 42 + 172585720 CTGC-------CTGGGATCCCCGAG----------TTTCCACAGCCCTAAATTATCGTA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169069691 42 - 170955103 CTGC-------CTGGGATCCCCGAG----------TTTCCATAGCCCTAAATTATCGTA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8356139 42 + 10161646 CTGC-------CTGGGATCCCCGAG----------TTTCCATAGCCCTAAATTATCGTA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1387016 42 + 3144229 CTGC-------CTGGGATCCCCAAG----------TTTCCATAGCCCTAAATTATCATA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96665302 42 + 98384682 CTGC-------CTGGGATCCCCGAG----------TTTCCATAGCCCTAAATTATCGTA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8210263 42 - 10857215 CTGC-------CTGGGATCCCCGAG----------TTTCCATAGCCCTAAATTATCATA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15603465 43 - 23502949 CTGC-------CTGTGATCCCTAAA---------TTTTCCATAGCCCTAAATTATCATA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169875424 41 + 171630274 CTGC-------CTGTGATCCC-AAG----------TTCCCATCACCCTAAATTATTGGA i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1244382 41 - 2164891 CTGC-------CTGTGATCCC-AAG----------TTCCCATCGCCCTAAATTATTGGA i cebCap1.NW_016107695v1 C 0 C 0 s otoGar3.GL873575 10944754 49 - 12073884 CTGCTTTAATTCCAAGTTCTCTTGC----------TTTCTCTAACTCTAAATTTTAGTA i otoGar3.GL873575 C 0 C 0 s dasNov3.JH569188 562690 52 + 760995 CTGC-------CTTTATTCCCCAAATTCTCTTTGTTTTTCATAACCCTAAATTATAATA i dasNov3.JH569188 C 0 C 0 e saiBol1.JH378287 1286364 4583 - 2905041 I e aotNan1.NW_018494782v1 1495452 1414 - 1813869 I e canFam3.chr1 56165692 4699 + 122678785 I a score=867504.000000 s hg38.chr6_KB021644v2_alt 97397 101 + 185823 ATGACGATATCCATGGAAGACTTGTGAAATTATACAATTATAAAATGTGCAATAAAGTCAACAGGAGATTGCTCTTGGATAAGCCCAGCACAGGGAAACGT s panTro5.chr6 173548968 101 + 175400573 ATGACGATATCCATGTAAGACTTGTGAAATTATACAATTATAAAATGTGCAATAAAGTCAACAGGAGATTGCTCTTGGATAAGCCCAACACAGGGAAACGT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171787541 101 + 173848474 ATGACGATATCCATGTAAGACTTGTGAAATTATACAATTATAAAATGTGCAATAAAGTCAACAGGAGATTGCTCTTGGATAAGCCCAACACAGGGAAACGT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11469771 101 - 12463322 ATGACGATATCCATGGAAGACTTGTGAAATTATACAATTATAAAATGTGCAATAAAGTCAACAGGAGATTGCTCTTGGATAAGCCCAGCACAGGGAAACGT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156294372 101 + 157873769 ATGATGATATCCATGGAAGACTTGTGAAATTATACAATTATAAAACGTGCAATAACGTCAACAGGAGATTGCTCTTGGATAAGCCCAGCACAGGGAAATGT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170324173 101 + 172585720 ATGACAATATCCATGGAAGACTTGAGAAAGGATACAATTATAAAATGTGCAATAACGTCGACAGGAGATTACTCTTGGATAAGCCCAGCCCGGGGAAACAT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169069733 101 - 170955103 ATGACAATATCCGTGGAAGACTTGAGAAAGGATACAATTATAAAATGTGCAATAACGTCGACAGGAGATTACTCTCGGATAAGCCCAGCCCAGGGAAACAT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8356181 101 + 10161646 ATGACAATATCCATGGAAGACTTGAGAAAGGATACAATTATAAAATGTGCAATAACATCGACAGGAGATTACTCTTGGATAAGCCCAGCCCAGGGAAACAT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1387058 101 + 3144229 ATGACAATATCCGTGGAAGACTTGAGAAAGGATACAATTATAAAATGTGCAATAACGTCGACAGGAGATTACTCTTGGATAAGCCCAGCCCAGGGAAACAT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96665344 101 + 98384682 ATGACAATATCCATGGAAGACTTGAGAAAGGATACAATTATAAAATGTGCAATAACTTCGACAGGAGATTGCTCTTGGATAAGCCTAGCCCAGGGAAACAT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8210305 101 - 10857215 ATGACAATATCTATGGAAGACTTGAGAAAGGATACAATTACAAAATGTGCAATAACGTCGACAGGAGATTACTCTTGGATAAGCCCAGCCCAGGGAAACAT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15603508 101 - 23502949 ATGATAATATCCATGGAAGACTTGAGAAATGATACAATTATAAAATGTGCAATAATGTCGACAAGAGATTGCTCTTGGATAAGCCCAGCCCAGGGAAACAT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169875465 99 + 171630274 ATGACAGTATCCATGGAAGACTCGTGAAGCTACACAGTTATAACGTGTG--ATAACCTCAATAGGAGGCTGCTCTTGGATGAACCCAGCACAGAGAAAGGT i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1244423 99 - 2164891 ATGACAATATCCACGGAAGACTCGTGAAGCTACACAATTATAATGTGTG--ATAACCTCAATAGGAGACTGCTCTTGGATAAGCCCAGCACAGGGAAACGT i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1496866 99 - 1813869 ATGACAATATCCACGGAAGACTCATGAAGCTACACAATTATAACATGTG--ATAACCTCAATAGGAGACTGCTCTTGGATAAGCCCATCACAGGGAAACGT i aotNan1.NW_018494782v1 I 1414 I 49 s otoGar3.GL873575 10944803 92 - 12073884 AGGACAATATCCACAAAA---CTGTGAAATTATGCAGT---GAGATGGGCAGCAAGGCC-ACAGGAAAGCACTC-CAGATGAGCC-AGTGCAGAGAAGGGC i otoGar3.GL873575 C 0 C 0 s dasNov3.JH569188 562742 98 + 760995 AT-ATGGTATTAATAAAAACCTTGTGAAATTATAGAA--GTAAAATGGGTAATCATGTCAACTAAGGATTACTCTTAAATAAGCACAGCACTGACAACTAT i dasNov3.JH569188 C 0 C 0 e saiBol1.JH378287 1286364 4583 - 2905041 I e canFam3.chr1 56165692 4699 + 122678785 I a score=58217.000000 s hg38.chr6_KB021644v2_alt 97498 8 + 185823 AATTTGA-C s panTro5.chr6 173549069 8 + 175400573 AATTTGA-C i panTro5.chr6 C 0 C 0 s panPan2.chr6 171787642 8 + 173848474 AATTTGA-C i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11469872 8 - 12463322 AATTTGA-C i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156294473 8 + 157873769 AATTTGA-C i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170324274 8 + 172585720 AATTTGA-C i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169069834 8 - 170955103 AATTTGA-C i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8356282 8 + 10161646 AATTTGA-C i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1387159 8 + 3144229 AATTTGA-C i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96665445 8 + 98384682 AATTTGA-C i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8210406 8 - 10857215 AATTTGA-C i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15603609 8 - 23502949 AATTTGA-C i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169875564 9 + 171630274 CGTTCGACC i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1244522 9 - 2164891 TATTCGACC i cebCap1.NW_016107695v1 C 0 C 0 s otoGar3.GL873575 10944895 8 - 12073884 AGCTCGG-C i otoGar3.GL873575 C 0 C 0 s dasNov3.JH569188 562840 8 + 760995 AATTTGG-C i dasNov3.JH569188 C 0 I 39 e saiBol1.JH378287 1286364 4583 - 2905041 I e aotNan1.NW_018494782v1 1496965 49 - 1813869 I e canFam3.chr1 56165692 4699 + 122678785 I a score=6685.000000 s hg38.chr6_KB021644v2_alt 97506 1 + 185823 A s panTro5.chr6 173549077 1 + 175400573 A i panTro5.chr6 C 0 C 0 s panPan2.chr6 171787650 1 + 173848474 A i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11469880 1 - 12463322 A i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156294481 1 + 157873769 A i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170324282 1 + 172585720 A i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169069842 1 - 170955103 A i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8356290 1 + 10161646 A i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1387167 1 + 3144229 A i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96665453 1 + 98384682 A i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8210414 1 - 10857215 A i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15603617 1 - 23502949 A i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169875573 1 + 171630274 A i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1244531 1 - 2164891 A i cebCap1.NW_016107695v1 C 0 C 0 s otoGar3.GL873575 10944903 1 - 12073884 C i otoGar3.GL873575 C 0 C 0 e saiBol1.JH378287 1286364 4583 - 2905041 I e aotNan1.NW_018494782v1 1496965 49 - 1813869 I e dasNov3.JH569188 562848 39 + 760995 I e canFam3.chr1 56165692 4699 + 122678785 I a score=59466.000000 s hg38.chr6_KB021644v2_alt 97507 19 + 185823 GTTGATTGGCCC---CCC--------------------GGTG---- s panTro5.chr6 173549078 30 + 175400573 GTTGATTGCCCC---CCC---CCCCCCGCG------CCGGTG---- i panTro5.chr6 C 0 C 0 s panPan2.chr6 171787651 27 + 173848474 GTTGATTGCCCC---CCC------GCACCG------CCGGTG---- i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11469881 19 - 12463322 GTTGATTGGCCC---CCC--------------------GGTG---- i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156294482 20 + 157873769 GTTGATTGGCCC---CCC-------------------CGGTG---- i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170324283 19 + 172585720 GTTGATTGGCCC---GTT--------------------GGTG---- i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169069843 19 - 170955103 GTTGATTGGCCC---GTT--------------------GGTG---- i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8356291 19 + 10161646 GTTGATTGGCCC---GTT--------------------GGTG---- i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1387168 19 + 3144229 GTTGATTGGCCC---CTT--------------------GGTG---- i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96665454 19 + 98384682 GTTGATTGGCCC---CTT--------------------GGTG---- i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8210415 19 - 10857215 GTTGATTGGCCC---CTT--------------------GGTG---- i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15603618 19 - 23502949 GTTGATTGGCCC---CTT--------------------GGTG---- i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169875574 42 + 171630274 GATTATTGCCCCCTGCCCGACCATGCCACGCAGCTTCTGGAG---- i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1244532 39 - 2164891 GATGATTGTCCC---CCCTACCCCATCCCGGAGCTTCCGGAG---- i cebCap1.NW_016107695v1 C 0 C 0 s otoGar3.GL873575 10944904 18 - 12073884 GAC--CTGGCCT---GCC-------------------AGGTG---- i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56170391 24 + 122678785 GCTGTGTGGCCC---CCT-------------------TGTTGCCAG i canFam3.chr1 I 4699 C 0 e saiBol1.JH378287 1286364 4583 - 2905041 I e aotNan1.NW_018494782v1 1496965 49 - 1813869 I e dasNov3.JH569188 562848 39 + 760995 I a score=519393.000000 s hg38.chr6_KB021644v2_alt 97526 65 + 185823 CTTTTCTGAA-------AAGAAATCACCAAGGCCAGGAGGGACACGAAAC--GCTTC--TTCGTGTGTC-GGCCCGT s panTro5.chr6 173549108 65 + 175400573 CTTTTCTGAA-------AAGAAATCACCAAGGCCAGGAGGGACACGAAAC--GCTCC--TTCGTGTGTC-GGCCCAT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171787678 65 + 173848474 CTTTTCTGAA-------AAGAAATCACCAAGGCCAGGAGGGACACGAAAC--GCTCC--TTCGTGTGTC-GGCCCGT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11469900 65 - 12463322 CTTTTCTGAA-------AAGAAATCACCAAGGCCAGGAGGGACACGAAAC--GCTCC--TTCGTGTGTC-GGCCCGT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156294502 63 + 157873769 CTTTTCTGAA-------AAGAAATCACCAAGGC--GGAGGGACACGAAAA--GCTCC--TTCGTGTATC-GGCCCAT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170324302 65 + 172585720 CTTTTCTGAA-------AAGAAATCACCAAGGCCAGGAGGGGTATGAAAC--GCTCC--TTCGTGTATC-AGCCCAT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169069862 65 - 170955103 CTTTTCTGAA-------AAGAAATCACCAAGGCCAGGAGGGGTATGAAAC--GCTCC--TTCGTGTATC-AGCCCAT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8356310 65 + 10161646 CTTTTCTGAA-------AAGAAATCACCAAGGCCAGGAGGGGTATGAAAC--GCTCC--TTCGTGTATC-AGCCCAT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1387187 65 + 3144229 CTTTTCTAAA-------AAGAAATCACCAAGGCCAGGAGGGGTATGAAAC--GCTCC--TTCGTGTATC-AGCCCAT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96665473 65 + 98384682 CTTTTCGGAA-------AAGAAATCACCAAGGCCAGGAGGGACATGAAAT--GCTCC--TTCGTATATC-GGCCCAT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8210434 65 - 10857215 CTTTTCTGAA-------AAGAAATTACCAAGGCCAGGAGGGGTATGAAAC--GCTCC--TTCATGTATC-AGCCCAT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15603637 65 - 23502949 CTTTTCTGAA-------AAGAAATCACCAAGGCCAGGAGGGACATGAAAC--ACTCC--TTCGTGTATC-GGCCCAT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169875616 65 + 171630274 CTTTTCCGTG-------AAGAAATTGCCAAGGCCAACAGGGACCTGACCC--TCTCC--TTCGTGTACC-GGTCCAT i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1244571 65 - 2164891 CTTTTCTGTG-------AAGAAATTGCCAAGGCCAACAGGGACTTGAAAC--ACTCC--TTCGTGTACC-GGCCCAT i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1497014 65 - 1813869 CTTTTCTGTG-------AAGAAACTGCCAAGGCCAACAGGGACTTGAAAC--ACTCC--TTCGTGTACC-GGCCCAT i aotNan1.NW_018494782v1 I 49 C 0 s otoGar3.GL873575 10944922 69 - 12073884 CTCCTCTGAAGGTTCGGGAGAG-----CGAGACCAGCA-GGACCTGTGGC--CCTTCAGTGAGGGTGTCAGGGTCAC i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56170415 58 + 122678785 CCCCTCTCAC-------AGGGA---------GGCAGCAGGAGCTTGGAACCGCGTTC--CACACCTCTC-AGTCTAT i canFam3.chr1 C 0 C 0 e saiBol1.JH378287 1286364 4583 - 2905041 I e dasNov3.JH569188 562848 39 + 760995 I a score=3866572.000000 s hg38.chr6_KB021644v2_alt 97591 416 + 185823 GTGCAGAA-TATCTCCAA----GATATAAATGACTAA----GAAGACTTAATTTGCCACCACAATATGTTTGCTGC-----AATTAATTTGGGGTG--ACTTGTATTTTAGCTTGGA--TCAA-AAATGGGATCTGAAA-TGTAA-AGAACACTGTTAGATTT-CC-CCACAGGCCGCTCTCTCTTTGGGTGATTTGC-TAACTTTTAATTTGCATTGATTCTCTGAAGGGATCTTAA---TTCAGATGTCTCTCCACCTCTTCGCTGTAGTT-TT-ACTTGGCCTTAGTCACGTGATCTTTGGGAGGT-TTTAGG-GAACGTTATCTAGAAAAAGAA-ATCACTTTAGATATTAACAAATGCAG-AAATGAATCAGTCCATTCATCATTAGGGAAAATGAATTGTTCCAGAACCCAGGATTCTATAAAGTAAAATAACACTTACTTTG s panTro5.chr6 173549173 416 + 175400573 GTGCAGAA-TATCTCCAA----GATATAAATGACTAA----GAAGACTTAATTTGCCACCACAATATGTTTGCTGC-----AATTAATTTGGGGTG--ACTTGTATTTTAGCTTGGA--TCAA-AAATGGGATCTGAAA-TGTAA-AGAACACTGTTAGATTT-CC-CCACAGGCCGCTCTCTCTTTGGGTGATTGGC-TAACTTTTAATTTGCATTGATTCTCTGAAGGGATCTTAA---TTCAGATGTCTCTCCACCTCTTCGCTGTAGTT-TT-ACTTGGCCTTAGTCACGTGATCTTTGGGAAGT-TTTAGG-GAACGTTATCTAGAAAAAGAA-ATCACTTTAGATATTAACAAATGCAG-AAATGAATCAGTCCATTCATCATTAGGGAAAATGAATTGTTCCAGAACCCAGGATTCTATAAAGTAAAATAACACTTACTTTG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171787743 416 + 173848474 GTGCAGAA-TATCTCCAA----GATATAAATGACTAA----GAAGACTTAATTTGCCACCACAATATGTTTGCTGC-----AATTAATTTGGGGTG--ACTTGTATTTTAGCTTGGA--TCAA-AAATGGGAACTGAAA-TGTAA-AGAACACTGTTAGATTT-CC-CCACAGGCCGCTCTCTCTTTGGGTGATTGGC-TAACTTTTAATTTGCATTGATTCTCTGAAGGGATCTTAA---TTCAGATGTCTCTCCACCTCTTCGCTGTAGTT-TT-ACTTGGCCTTAGTCACGTGATCTTTGGGAAGT-TTTAGG-GAACGTTATCTAGAAAAAGAA-ATCACTTTAGATATTAACAAATGCAG-AAATGAATCAGTCCATTCATCATTAGGGAAAATGAATTGTTCCAGAACCCAGGATTCTATAAAGTAAAATAACACTTACTTTG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11469965 416 - 12463322 GTGCAGAA-TATCTCCAA----GATATAAATGACTAA----GAAGACTTAATTTGCCACCACAATATGTTTGCTGC-----AATTAATTTGGGGTG--ACTTGTATTTTAGCTTGGA--TTAA-AAATGGGATCTGAAA-TGTAA-AGAACACTGTTAGATTT-CC-CCACAGGCCGCTCTCTCTTTGGGTGATTTGC-TAACTTTTAATTTGCATTGATTCTCTGAAGGGATCTTAA---TTCAGATGTCTCTCCACCTCTTCGCTGTAGTT-TT-ACTTGGCCTTAGGCACGTGATCTTTGGGAGGT-TTTAGG-GAACGTTATCTAGAAAAAGAA-ATCACTTTAGATATTAACAAATGCAG-AAATGAATCAGTCCATTCATCATTAGGGAAAATGAATTGTTCCAGAACCCAGGATTCTATAAAGTAAAATAACACTTACTTTG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156294565 415 + 157873769 GTGCAGAA-TGTCTCCAA----GATATAAATGACTAA----GAACACTTAATTTGCCACCAGAATATGTTTGCTGC-----GATTAATTTGGGGTG--ACTTGTATTTTAGCTTGGA--TTGA-AAATGGGATCTGAAA-TGTAA-AGAACACAGCTAGATTTCCC-CCACAGGCCGCTCTCTCTCTGGGTGATTTGC-TAACTGTTAATTTGCATTGATTCTCTGAGGGGACCTTAA---TTCAGATGTCTCTCCACCTCTTCGCTGTAGTT-TT-ACTTGGCCTTAGTCATGCGATCTTTGGGAGGT-TTTAGG-GAACGTTATCCAGAAAAAGAA-ATCACTTTAGATGTTA--AAATGCAG-AAATGAATCAGTCCATTCATCATTAGGGAAAATGAATTGTTCCAGAACCCAGGATTCTATAAAGTAAAATAACACTTACTTTG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170324367 415 + 172585720 GTGCAGAA-TGTCTCCAA----GATATAAATGACTGA----GAACACTTAATTTGCCACCACAGTATGTTTGTTGC-----AATTAATTTGGGGTG--ACTTGTATTTTAGCTTGGA--TTAA-ACATTGGGTCTGAAA-TGTAA-AGAACACTGTTAGATTT-CC-CCACAGGCCGCTCTCTCTTTGGGTGAGTTGC-TAAC--TTAATTTGCATTGATTCTCTGAAGGGACCTTAA---TTCCGATGTCTCTTCACCTCTTCGCTGTCGTT-TT-ACTTGGCCTTAGTCATACGATCTTTGGGAGGT-TTTAGGTGAATGTTATCTAGAAAACGAA-ATCACTTTAGATATTTACAAATGCAG-AAATGAATCAGGCCTTTCATCATTAGGGAAAATGAATTGTTCCAGAGCCCAGGATCCTATAAAGTAAAATAACACGTACCTTG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169069927 417 - 170955103 GTGCAGAA-TGTCTCCAA----GATATAAATGACTGA----GAACACTTAATTTGCCACCACAGTATGTTTGTTGC-----AATTAATTTGGGGTG--ACTTGTATTTTAGCTTGGA--TTAA-ACATTGGGTCTGAAA-TGTAA-AGAACACTGTTAGATTT-CC-CCACAGGCCGCTCTCTCTTTGGGTGAGTTGC-TAACTTTTAATTTGCATTGATTCTCTGAAGGGACCTTAA---TTCCAATGTCTCTTCACCTCTTCGCTGTAGTT-TT-ACTTGGCCTTAGTCATACGATCTTTGGGAGGT-TTTAGGTGAATGTTATCTAGAAAAAGAA-ATCACTTTAGATATTTACAAATGCAG-AAATGAATCAGGCCTTTCATCATTAGGGAAAATGAATTGTTCCAGAGCCCAGGATCCTATAAAGTAAAATAACACGTACCTTG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8356375 417 + 10161646 GTGCAGAA-TGTCTCCAA----GATATAAATGACTGA----GAACACTTAATTTGCCACCACAGTATGTTTGTTGC-----AATTAATTTGGGGTG--ACTTGTATTTTAGCTTGGA--TTAA-ACATTGGGTCTGAAA-TGTAA-AGAACACTGTTAGATTT-CC-CCACAGGCCGCTCTCTCTTTGGGTGAGTTGC-TAACTTTTAATTTGCATTGATTCTCTGAAGGGACCTTAA---TTCCGATGTCTCTTCACCTCTTCGCTGTAGTT-TT-ACTTGGCCTTAGTCATACGATCTTTGGGAGGT-TTTAGGTGAATGTTATCTAGAAAAAGAA-ATCACTTTAGATATTTACAAATGCAG-AAATGAATCAGGCCTTTCATCATTAGGGAAAATGAATTGTTCCAGAGCCCAGGATCCTATAAAGTAAAATAACATGTACCTTG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1387252 417 + 3144229 GTGCAGAA-TGTCTCCAA----GATATAAATGACTGA----GAACACTTAATTTGTCACCACAATATGTTTGTTGC-----AATTAATTTGGGGTG--ACTTGTATTTTAGCTTGGA--TTAA-ACATTGGATCTGAAA-TGTAA-AGGACACTGTTAGATTT-CC-CCACAGGCCGCTCTCTCTTTGGGTGAGTTGC-TAACTTTTAATTTGCATTGATTCTCTGAAGGGGCCTTAA---TTCCGATGTCTCTTCACCTCTTCGCTGTAGTT-TT-ACTTGGCCTTAGTCATGCGATCTTTGGGAGGT-TTTAGGTGAATGTTATCTAGAAAAAGAA-ATCACTTTAGATATTCACAAATGCAG-AAATGAATCAGGCCTTTCATCATTAGGGAAAATGAATTGTTCCAGAGCCCAGGATCCTATAAAGTAAAACGACACTTAACTTG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96665538 417 + 98384682 GTGCAGAA-TGTCTCCAA----GATATAAATGACTGA----GAACACTTAATTTGCCACCACAGTATGTTTGTTGC-----AATTAATTTGGGGTG--ACTTGTATTTTAGCTTGGA--TTAA-ACATTGGGTCTGAAA-TGTAA-AGAACACTGTTAGATTT-CC-CCACAGGCCACTCTCTCTTTGGGTGAGTTGC-TAACTTTTAATTTGCATTGATTCTCTGAAGGGACCTTAA---TTCTGATGTCTCTTCACCTCTTCGCTGTAGTT-TT-ACTTGGCCTTAGTCATGAGATATTTGGAAGGT-TTTAGGTGAATGTTATCTAGAAAAAGAA-ATCACTTTAGATATTCACAAATGCAG-AAATGAATCAAGCCATTCATTATTAGGGAAAATGAATTGTTCCAGAGCCCAGGATCCTATAAAGTAAAATAACACTTAACTTG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8210499 415 - 10857215 GTACAGAA-TGTCTCCAA----GATATAAATGACTGA----GAACACTTAATTTGTCACCACAATATGTTTGTTGC-----AATTAATTTGGGGTG--ACTTGTATTTTAGCTTGGA--TTAA-ACACTGGATCTGAAA-TGTAA-AGGACACTGTTAGATTT-CC-CCACAGGCCGCTCCCTCTTCGGGTGAGTTGT-TAACTTTTAA--TGCATTGATTCTCTGAAGGGACCTTAA---TTCCGATGGCTCTTCACCTCTTCGCTGTAGTT-TT-ACTTGGCCTTAGTCGCGCGATCTTTGGGAGGT-TTTAGGTGAATGTTATCTAGAAAAAGAA-ATCACTTTAGATATTCACAAACGCAG-AAATGAATCAGGCCTTTCATCGTTAGGGAAAATGAATTGTTCCAGAGCCCAGGATCCTATAAAGTAAAACGACACTTAACTTG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15603702 417 - 23502949 GTGCAGAA-TGTCTCCAA----GATATAAATGACTGA----GAACACTTAATTTGCCACCACAATATGTTTGTTGC-----AATTAATTTGGGGTG--ACTTGTATTTTAGCTTGGA--TTAA-ACTTTGGATCTGAAA-TGGAA-AGAACACTGTTAGGTTT-CC-CCACAGGCCGCTCTCTCTTTGGGTGAGTTGC-TAACTTTTAATTTGCATTGATTCTCTGAAGGGACCTTAA---TTCTGATATCTCTTCACTTCTTCGCTGTAGTT-TT-ACTCGGCCTTAGTCATGTGATCTTTGGGAGGT-TTTAGGTGAATGTTATCTAGAAAAAGAA-ATCACTTTAGATATTCACTAATGCAG-AAATGAATCAGGCCATTCATCATTAGGGAAAATGAATTGTTCCAGAGCCCAGGATCCTATAAAGTAAAATAAGACTTAAGTTG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169875681 414 + 171630274 GTGCAGAA-TATCTCCAA----GATACAAATGACTAA----GAATGCCTAATTTGCCACAGCAGTGTG--TGTGGT-----AATTAGGTTGGGGTG--ACCTGTGTCCCAGCTTGTA--TTAA-AAATGGGATCTAAAG-TGTGA-AGAACA--GTTAGATTT-CC-CCACAGGCTGCTCTCTCTTTGGGTGATGTCC-TACGTTCTGATTTGCCTGGATTCTCTGAAGGGACCTTAA---CTCAGACGTCTCTCCGCCTCTTGGCTATAGTT-TT-GCTTCTCCTCAGCCATGCGATCTTCGGGAGGT-TTTAGGTGAACGTCCTCTAGAAAAAGAA-ACCGCTTTAGATATTAACAAATGCAGAAAATGAATCAGCATATTCAGCATTCGGGAAAGTGGATTGTTCCAGAACCCAGGATCCTGTAGAGGGAAATAACACTAACCTTG i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1244636 415 - 2164891 GTGCAGAATTATCTCCAG----GATACAAATGACTAA----GAACGCTTAATTTGCCAACACAATATGTCTGTGGC-----AATTACTTTGGGGTG--AC--GTGTTTTAGCTTGTA--TTAA-AAATGGGATCTAAAG-TGTAA-AGAACACTGCTAGATTT-CC-CCACAGGCTGCTCTCTCTTTGGGTGATTTGC-TAACTTTTGATTTGCCTGGATTCTCTGAAGGGGCCTTAA---CTCAGATGTCCCTCCACCTCTTCGCTGTAGTT-TT-ACTTAGCCTTAGCCATGCGATCTTCGGGAGGT-TTTAGGTGAATGTTATCTAGAAAAAGAA-ACCGCTTTAGATATTAACAAATGCAGAAAATGAATCTG--TATTCATCATTAGGGAAAGGGAATCGTTCCAGAACCCAGGATCCTATAAAGTGAAATAACACTTACCTTG i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1497079 416 - 1813869 GTGCAGAATTATCTCCAA----GATACCGATGACTAA----GAACGCTTAATTTGCCACCACAATGTGTCTGTGGC-----AATTACTTTGGGGTGAAACTTGCGTTTCAGCTTGTA--TTAA-AGATGGGATCTGAAG-TGTAA-AGAACACTGTTAGATTT-CC-CCACAGGCTGCTCTCTCTTTGGGCGATTTGC-TGACT-----TTTGCCTGGATTCTCTGAAGGGGCCTTAA---CTCAGATGTCTCTCCACCTCTTCACTGTAGCT-TT-ACTTAGCGTCAGCCATGCGATCTTCGGGAGGT-TTTAGGTGAATGTTATCTAGAAAATGAA-ACCGCTTTAGATATTAACAAATGCAGAAAATGAATCAGTGTATTCATCACTAGGGAAAGTGAATTGTTCCAGAACCCAAGATCCTGTAAAGTGAAATAACACTTACCTTG i aotNan1.NW_018494782v1 C 0 I 293 s otoGar3.GL873575 10944991 368 - 12073884 ACGTGTGA-TGTCTCAAACTGGAGGATGAAGGA---A----GCATGTTTAATTTG-CACAACAATATGTTTATTTC-----AATCAATCCTGGATG--CTTTGTATTTTAATTTGAA--CTAA-AAACATGGTCCAAAACCCTCA-AAAGCAGCATGAGATTT-TC-CCCCAGAC----CTCTCTTTGAGTGGCTTACATAACGTTAGCTTTGCATGGATGTTCTGAAGGGACCTTAA---CTCAGATGTTCCCCTAAGTCTCGGCTAAAGCT-TTCATTTGGTCTCAGTAGTGTTATCTTTGGGAG----TCA---GACTTTTATCTGAGAAAAGAATGTAGCCTAAGATACTAACAAATTTGG-----------------------------AGAGAGAGCCCTTGTGGAACCCAGGGCCCTGCAAAGTTGG--------------- i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56170473 407 + 122678785 ATGGATAA-TATTTCCAA----AAACTGAAAGATTAAATAGGAGCATTTGGTTTGCCCCCACAATATGTTTCTCCCAGTTGAATTAATTTGGGGTG--A--TGCACTTT--CTCAGA--TGGAGAAACGAGACCTGGTC-TTGGA-GGAGCGGTGTTGGACTC-CG-AC-----CCGTGCCCTCTACCCAGGACATCC-----------CTGGCGTCCGCTCCTCCAACGGGCCTCAG---CGCTGATGTTGCTG-GTTTCTGACCTGTAGGG-TC-AATGGGGTCTGACTGCACAATCTTCAGTTT-T-CTTAGAAGAACTTTATCCTGAAGAAGAATATGACTTCAGATATTTACAAAAGAGG-GAATGAATCACTTCATCCATCACTGGGGAAGCTGAACTGTTTCAGAATCCAGGATCCCACAGACTGAAATCACACTTCCCTTG i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 562887 399 + 760995 -------------------------------GAGCAG----AGTAATTGCATTTGCCACCACCATGTATTTATTTC-----AATTAATTTGGGGTG--ATTTGTATCCTAATTTGGATTTTAA-AAATGTGATCTTAAA-TAGAAGAGGGCAATGCTTTATTT-TCATTCCAGGC--CTGCCTCTTTGGGTGTTCTGCTTTACTTTTAATTTGCAGCAATTCTCTGAAAGGAACTTAATATTACAGATTGCTCTCTAAATATCAGCTGTAGTTCCT-ACTTAGCCTTCACTGTGTGATCTTTAGGAGGTATTTAAGTGAACTTCATCTAGAAAAAAAT-GTATCTTAAAATATTAACAAAAAAGGGAAATGAATTTGTCTATTGATTATTAAGGGCAACAAATTGGTCCAGAACCTATAATCC-AAAAATTTAAATAACATTTACCTTG i dasNov3.JH569188 I 39 C 0 e saiBol1.JH378287 1286364 4583 - 2905041 I a score=462119.000000 s hg38.chr6_KB021644v2_alt 98007 66 + 185823 GAATTGCTAAGGGGTTTAAAAA--------CACCCACTCCATCAAGCCTGTGAGCTGAACCCCAGGCCTGCACG s panTro5.chr6 173549589 66 + 175400573 GAATTGCTAAGGGGTTTAAAAA--------CACCCACTCCATCAAGCCTGTGAGCTGAACCCCAGGCTTGCATG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171788159 66 + 173848474 GAATTGCTAAGGGGTTTAAAAA--------CACCCACTCCATCAAGCCTGTGAGCTGAACCCCAGGCTTGCATG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11470381 66 - 12463322 GAATTGCTAAGGGGTTTAAAAA--------CACCCACTCCATCAAGCCTGTGAGCTGAACCCCAGGCCTGCACG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156294980 66 + 157873769 GAATTGCTAAGGGGTTTAAAAA--------CACCCACTCCATCAAGCCTGTGAGCTGAACCCCAGGCCTGCACG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170324782 66 + 172585720 GAATTGCTAAGGGGTTTAAATA--------CACCCACTCCGTCAAGCCTGTGAAGTGAACCCCAGGCCTGCATG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169070344 66 - 170955103 GAATTGCTAAGGGGTTTAAATA--------CACCCACTCCGTCAAGCCTGTGAAGTGAACCCCAGGCCTGCATG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8356792 66 + 10161646 GAATTGCTAAGGGATTTAAATA--------CACCCACTCCGTCAAGCCTGTGAAGTGAACCCCAGGCCTGCATG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1387669 66 + 3144229 GAATTGCTAAGGGGTTTAAATA--------CACCCACTCTGTCAAGCCTGTGAGGTGAACCCCAGGCCTGCATG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96665955 66 + 98384682 GAATTGCTGAGGGGTTTAAATA--------CACCCATTCCGTCAAGCCTGTGAAGTGAACCCCAGGCCTGCATG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8210914 66 - 10857215 GAATTGCTAAGGGGTTTAAATA--------CACCCACTCCGTCAAGCCTGTGAGGTGAACCCCAGGCCTGCATG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15604119 66 - 23502949 GACTTGCTAAGGGGTTTAAATA--------CACCCACTCCGTCAAGCCTGTGAGGTGAACCCCAGGCCTGCATG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169876095 61 + 171630274 TCCTTGTTACGGGTTTGAAACA----------CCCG--CCATCAAGCCTGAGAGCTG-ACCCCAGGCCTGCACA i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1245051 63 - 2164891 TCCTTGCTAAGGGTCTGGAACA--------CCCCCG--CCAACAAGCCTGAGAGCTG-ACCCAATGCCTGCACA i cebCap1.NW_016107695v1 C 0 I 21 s otoGar3.GL873575 10945359 70 - 12073884 GAATTGAGAAGTGACTGGAATTGTCCCCTCCACCCAGCCCCCCAGGCTGGT---CTGGGCCCTGGTGACGCGC- i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56170880 62 + 122678785 TCATTGATAAGGGATGGGACGG--------CTTCTGCTCCACTGGGCCTG----CTCCCACCCACGACCTCACC i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 563286 61 + 760995 AAATTGATAAGGGATTTAGAAG--------CACCCATTCCATCAAGTCTGTTAGTCTAATCCCAGTTTC----- i dasNov3.JH569188 C 0 C 0 e saiBol1.JH378287 1286364 4583 - 2905041 I e aotNan1.NW_018494782v1 1497495 293 - 1813869 I a score=47177.000000 s hg38.chr6_KB021644v2_alt 98073 14 + 185823 --------TATGGCGGAGTGTG s panTro5.chr6 173549655 14 + 175400573 --------TATGGCAGAGTGTG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171788225 14 + 173848474 --------TATGGCGGAGTGTG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11470447 14 - 12463322 --------TATGGCGGGGTGTG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156295046 14 + 157873769 --------TATGGCGGGGTATG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170324848 14 + 172585720 --------CATGGCGGGGTGTG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169070410 14 - 170955103 --------CATGGCGGGGTGTG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8356858 14 + 10161646 --------CATGGCGGGGTGTG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1387735 14 + 3144229 --------CATGCCGGGGTGTG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96666021 14 + 98384682 --------CATGGCGGGGTGTG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8210980 14 - 10857215 --------CATGCCGGGGTGTG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15604185 14 - 23502949 --------CATGGCGGGGTGTG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169876156 7 + 171630274 ---------CTGGCGG------ i calJac3.chr4 C 0 I 9 s otoGar3.GL873575 10945429 12 - 12073884 ----------TGGGGAGGACAG i otoGar3.GL873575 C 0 I 2 s canFam3.chr1 56170942 12 + 122678785 --------CACAACGGGTGG-- i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 563347 15 + 760995 TGGGCCAAAATAGCA------- i dasNov3.JH569188 C 0 C 0 e saiBol1.JH378287 1286364 4583 - 2905041 I e aotNan1.NW_018494782v1 1497495 293 - 1813869 I e cebCap1.NW_016107695v1 1245114 21 - 2164891 I a score=371614.000000 s hg38.chr6_KB021644v2_alt 98087 58 + 185823 TAATGCCTGTGT-GTG-TTTCAGAGACC--ACA-ATTCCCAGTCCCCACT---CCAGGTCCTGTGC s panTro5.chr6 173549669 58 + 175400573 TAATGCCTGTGT-GTG-TTTCAGAGACC--ACA-ATTCCCAGTCCCCACT---CCAGGTCCCGTGC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171788239 58 + 173848474 TAATGCCTGTGT-GTG-TTTCAGAGACC--ACA-ATTCCCAGTCCCCACT---CCAGGTCCCGTGC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11470461 58 - 12463322 TAATGCCTGTGT-GTG-TTTCAGAGACC--ACA-ATTCCCAGTCCCCACT---CCAGGTCCCGTGC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156295060 58 + 157873769 TAATGCTTGTGT-GTG-TTTCAGAGCCC--ACA-ACTCCCAGTCCCCACT---CCAGCTCCTGTGC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170324862 58 + 172585720 TAATGCCTGTGT-GTG-TTTCGGAGCCC--ACA-ATTCTCAGTCCCCACT---CCAGCTCCGGTGC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169070424 58 - 170955103 TAATGCCTGTGT-GTG-TTTCGGAGCCC--ACA-ATTCTCAGTCCCCACT---CCAGCTCCGGTGC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8356872 58 + 10161646 TAATGCCTGTGT-GTG-TTTCGGAGCCC--ACA-ATTCTCAGTCCCCACT---CCAGCTCCGGTGC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1387749 58 + 3144229 TAATGCCTGTGT-GTG-TTTCGGAGCCC--ACA-GTTCTCAGTCCCCACT---CCAGCTCTGGTGC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96666035 58 + 98384682 TAATGCCTGTGT-GTG-TTTCGGAGCCC--ACA-ATTCCCAGTCCCCACT---CCAGCTCTGGTGC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8210994 58 - 10857215 TAATGCCCGTGT-GTG-TTTCGGAGCCC--ACA-GTTCTCAGTCCCCACT---CCAGCTCTGGTGC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15604199 58 - 23502949 TAATGCCTGTGT-GTG-TTTCGGAGCCC--ACA-ATTCCCAGTCCCTACT---CCAGCTCCGGTGC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169876172 53 + 171630274 TCAGGCCTGTGT-GTG---CAGGAACCC--ACA-GCT--CAAGCCCCATT---CCAGCCCCC-TGC i calJac3.chr4 I 9 I 693 s cebCap1.NW_016107695v1 1245135 57 - 2164891 TCACGCCTGTGT-GTG-TTCAGGAACCC--ACA-GCTCCCAGTCCCCATT---CCAGCTCCC-TGC i cebCap1.NW_016107695v1 I 21 I 1 s otoGar3.GL873575 10945443 57 - 12073884 TGAAGTCTGTGTCTTG-TTTGGGAGCTC--AAA-GACCCCCATCGTCAC----CCAGGTCACGCC- i otoGar3.GL873575 I 2 C 0 s canFam3.chr1 56170954 50 + 122678785 AAATG-----GC-ATC-ATTCAGAAACCCAGGA-ATGCCCCATCATCGGT--GTCATCTC------ i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 563362 58 + 760995 TAACATCGTTGT-TTGATTTAGGAGCCC--AGAGACTGTCAATCAGTACTTATTTATCTCC----- i dasNov3.JH569188 C 0 C 0 e saiBol1.JH378287 1286364 4583 - 2905041 I e aotNan1.NW_018494782v1 1497495 293 - 1813869 I a score=1197369.000000 s hg38.chr6_KB021644v2_alt 98145 175 + 185823 CTCCCTGGGCGCTGTGGTTGGTGAACCCCAGTGGGCTGTTTAGGTGTTGAACTTGTACATAACTTGTACATGTGCAATCTTTGTATTTGTAATCAGAATTGCTCAATACCTCCCCTTCCCT-----------------TAGACTATATTAGATAATTTGCACCA-TGAGTGACATTTGCAAAACTTTAAGAGG s panTro5.chr6 173549727 175 + 175400573 CTCCCTCGGCGCTGTGGTTAGTGAACCCCAGTGGGCTGTTTAGGTGTTGAACTTGTACATAACTTGTACATGTGCAATCTTTGTATTTGTAATCAGAATTGTTCAATACGTCCCCTTCCCT-----------------TAGACTATAGTAGATAATTTGCACCA-TGAGTGACATTTGCAAAACTTTAAGAGG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171788297 175 + 173848474 CTCCCTCGGCGCTGTGGTTAGTGAACCCCAGTGGGCTGTTTAGGTGTTGAACTTGTACATAACTTGTACATGTGCAATCTTTGTATTTGTAATCAGAATTGTTCAATACGTCCCCTTCCCT-----------------TAGACTATAGTAGATAATTTGCACCA-TGAGTGACATTTGCAAAACTTTAAGAGG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11470519 174 - 12463322 CTCCCTGGGCGCTGTGGGTAGTGAACCCCAGTGGGCTGTTTAGGTGttgaacttgtacataacttgtacatgtgcggtctttgtatttgtaATCAGAATTGCTCAATACCT-CCCTTCCCT-----------------TAGACTATAGTAGATAATTTGCACCA-TGAGTGACATTTGCAAAACTTTAAGAGG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156295118 175 + 157873769 CTCCCTGGGCGCTGTGGTTAGTGAACCCCGGTGGGCTGTTTAGGTGTTGAACTTGTACATAACTTGTACATGTGCAATCTTTGTATTTGTAATCAGAATTGCTCAATACCTCCCTTTCCCT-----------------TAGACTATAGTAGATAATCTGCACCA-TGAGTGACATTTGCAAAACTGTAAGAGG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170324920 175 + 172585720 CTCCCTGGGCGCTGTGGTCAGTGAACCCCAGTGGGCTGTTTAGATGTTGGACTTGTACATAACTTGTACATGAGCAGTCTTTGTATTAGTAATCAGAATTGCTCAACACCTCCCCTTCCCT-----------------TAGACTATAGTAGATAATCTGCACCA-TGAGTGACATTTGTAAAACTCTAATAGG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169070482 175 - 170955103 CTCCCTGGGCGCTGTGGTCAGTGAACCCCAGTGGGCTGTTTAGATGTTGGACTTGTACATAACTTGTACATGAGCAGTCTTTGTATTTGTAATCAGAATTGCTCAACACCTCCCCTTCCCT-----------------TAGACTATAGTAGATAATCTGCACCA-TGAGTGACATTTGTAAAACTCTAATAGG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8356930 175 + 10161646 CTCCCTGGGCGCTGTGGTCAGTGAACCCCAGTGGGCTGTTTAGATGTTGGACTTGTACATAACTTGTACATGAGCAGTCTTTGTATTTGTAATCAGAATTGCTCAACACCTCCCCTTCCCT-----------------TAGACTATAGTAGATAATCTGCACCA-TGAGTGACATTTGTAAAACTCTAACAGG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1387807 175 + 3144229 CTCCCTGGGCGCTGTGGTCAGTGAACCCCAGTGGGCTGTTTAGGTGTTGAACTTGTACATAACTTGTACATGAGCAGTCTTTGTATTTGTAATCAGAATTGCTCAACACCTCCCCTTCCCT-----------------TAGACTATAGTAGGTAATCTGCACCA-TGAGTGACATTTGTAAAACTCTAATAGG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96666093 159 + 98384682 CTCCCTGGGTGCTGTGGTCAGTGAACCCCAGTGGGCTGTTTAGGTGTTGGACTTGTACATAACTTGTACATGAGCAGTCTTTGTATTTGTAATCAGAATTGCTCAACACCTCCCCTTCCCT-----------------TAGACTATAGTAGATAATCTGCACCA-TGAGTGACATTT---------------- i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8211052 175 - 10857215 CTCCCTGGGCGCTGTGGTCAGTGAACCCCAGTGGGCTGTTTAGGTGTTGAACTTGTACATAACTTGTACATGAGCAGTCTTTGTATTTGTAATCAGAATTGCTCAACACCTCCCCTTCCCT-----------------TAGACTATAGTAGGTAATCTGCACCA-TGAGTGACATTTGTAAAACTCTAATAGG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15604257 173 - 23502949 CTCCCTGGGCACTGTGGTCAGTGAACCCCAGTGGGCTGTTTAGGTGTTGAACTTGTACATAACTTGTACATGAGCAGTCTTTGTATTTGTAATCAGAATTCCTCAACACCTCCCCTTCCCT-----------------TAGAC--TAGTAGATAATCTGCACCA-TGAGTGACATTTGCAAAACTTTAAGAGG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169876918 162 + 171630274 CTCCCTGATGGCTGAGGCTGGTGAACCCCAGTGGGTTGTGGAGTTGTTGAATCTG-----------CACACGTGCGGTATTTGTATTTCTCATTAGAATTGTTCAGTGCCT-CCCTTCCCT-----------------TAGACTATAGTAAAGAATCTGCCCCA-TGATTGACATTTGCAAAACTTCAGATG- i calJac3.chr4 I 693 C 0 s cebCap1.NW_016107695v1 1245193 160 - 2164891 CTCCCTGATGGCTGAGGTTAGTGAACCCCAGTGGGTTCTGGAGTTGTTGAATTTG-------------CACGTGTGGTATTTGTATTTGTCATCAGAATTGTTCAATACTT-CCCCTCCCT-----------------TAGACTATAGTAAAGAATCTGCCCCA-TGATTGACATTTGCAAAACTTGAGATG- i cebCap1.NW_016107695v1 I 1 C 0 s otoGar3.GL873575 10945500 133 - 12073884 GTCCCTAGTGGCTTTGCTGGAAGAGACTCCGCGG----------------------------------------------------TTATAACCAATACTGTCCAACACTTTGCTCTCCCC-------ACATGCCCCACAGAACACAATGAAGGGTCTGCTCAG-GGATGGACATCTGCAAACATTTAATAGC i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56171004 114 + 122678785 --------------------------CCCTCTGGGCTG---------------------------------------CATCTGTATTTGCCATCAGGATTCCCCAGTGTCTTCCTTTCCTTCCCCCAAACACGCCCC-TAGAAAATGGCACAGAATCTG-ATCA-TG----------GCAAAATCACATACA- i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 563420 178 + 760995 CTCCCTAATGACTTCATTTAGTGAAACTCAGTTCGTTGT----------AACATCTTTGAAAGTTGTATATCCATGACATTCATATTTGTAATCCATCTTCCACAATATCTTCCATTCCTT-----AAACCCATCCTGCAGACTGTAACATTGGACATGTCCTAGTGAGTGGGGTATGCCAACGTTAAATACA i dasNov3.JH569188 C 0 C 0 e saiBol1.JH378287 1286364 4583 - 2905041 I e aotNan1.NW_018494782v1 1497495 293 - 1813869 I a score=2265558.000000 s hg38.chr6_KB021644v2_alt 98320 232 + 185823 TTTTTCCTAAA--CC-ATGAGACTGCACATT-TGCTAAGGCCCCT----TGTAAGT-GGCTGAGTAGGCTC-CTAAGCG--CCTCCACCCC-GAGGC--AG-----GGGCAAAATCACATCTTAAAACTTTAAGTCTCATAATACTTTATGAAATAATGCAGGGTGTGTAACC-TGCATTCATTTATATGGTATTT-AAAATT-AATATTCTGAGTCAAATTTAATTTAACTTGAACCAGCTGTCAGCCCAAACA s panTro5.chr6 173549902 232 + 175400573 TTTTTCCTAAA--CC-ATGAGACTGCACATT-TGCTAAGGCCCCT----TGTAAGT-GGCTGAGTAGGCTC-CTAAGCG--CCTCCACCCC-GAGGC--AG-----GGGCAAAATCACATCTTAAAACTTTAAGTCTCATAATACTTTATGAAATAATGCAGGGTGTGTAACC-TGCATTCATTTATATGGTATTT-AAAATT-AATATTCTGAGTCAAATTTAATTTAACTTGAACCAGCTGTCAGCCCAAACA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171788472 232 + 173848474 TTTTTCCTAAA--CC-ATGAGACTGCACATT-TGCTAAGGCCCCT----TGTAAGT-GGCTGAGTAGGCTC-CTAAGTG--CCTCCACCCC-GAGGC--AG-----GGGCAAAATCACATCTTAAAACTTTAAGTCTCATAATACTTTATGAAATAATGCAGGGTGTGTAACC-TGCATTCATTTATATGGTATTT-AAAATT-AATATTCTGAGTCAAATTTAATTTAACTTGAACCAGCTGTCAGCCCAAACA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11470693 232 - 12463322 TTTTTCCTAAA--CC-ATGAGACTGCACATT-TGCTAAGGCCCCT----TGTAAGT-GGCTGAGTAGGCTC-CTAAGCA--CCTCCACCCC-GAGGC--AG-----GGGCAAAATCACATCTTAAAACTTTAAGTCTCATAATACTTTATGAAATAATGCAGGGTGTGTAACC-TGCATTCATTTATATGGTATTT-AAAATT-AATATTCTGAGTCAAATTTAATTTAACTTGAACCAGCTGTCAGCCCAAACA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156295293 232 + 157873769 TTTTTCCTAAA--CC-ATCAGACTGCACATT-TGCTAATGCCCCT----TGTAAGG-GGCTGAGTAGGCTC-CTAAGCG--CCCCCACCCT-GAGGC--AG-----GGGCAAAATCACATCTTAAAACTTTAAGTCTCATAATACCTTATGAAATAGTGCAGGGTGTGTAACC-TGCATTCATTTATATGGTATTT-AAAATT-AATATTCTGAGTTAAATTTAATTTAACTTGAACCAGCTGTCAGCCCAAACA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170325095 232 + 172585720 TTTTTCCTAAA--CC-ACGAGGCTGCACGTT-TGCTAAGGCCCCT----TGTAAGG-GGCTGAGTAGGCTC-CTAAGCG--CCCCCACCCC-GGGGA--AG-----GGGCAAAATCACATCTTAAAACTTTAAGTCTCATAATACTTTATGAAATAATGCAGGGTGTGTAACC-TGCATTCATTTATATGGTATTT-AAAATT-AATATTCTGAGTCAAATTTAATTTAACTTGAACCAGCTGTCAGCCCAAACA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169070657 232 - 170955103 TTTTTCCTAAA--CC-ACGAGGCTGCACGTT-TGCTAAGGCCCCT----TGTAAGG-GGCTGAGTAGGCTC-CTAAGCG--CCCCCACCCC-GGGGA--AG-----GGGCAAAATCACATCTTAAAACTTTAAGTCTCATAATACTTTATGAAATAATGCAGGGTGTGTAACC-TGCATTCATTTATATGGTATTT-AAAATT-AATATTCTGAGTCAAATTTAATTTAACTTGAACCAGCTGTCAGCCCAAACA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8357105 232 + 10161646 TTTTTCCTAAA--CC-ACGAGGCTGCACGTT-TGCTAAGGCCCCT----TGTAAGG-GGCTGAGTAGGCTC-CTAAGCG--CCCCCACCCC-GGGGA--AG-----GGGCAAAATCACATCTTAAAACTTTAAGTCTCATAATACTTTATGAAATAATGCAGTGTGTGTAACC-TGCATTCATTTATATGGTATTT-AAAATT-AATATTCTGAGTCAAATTTAATTTAACTTGAACCAGCTGTCAGCCCAAACA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1387982 231 + 3144229 -TTTTCCTAAA--CC-ACGAGGCTGCACGTT-TGCTAAGGTCCCT----TGTAAGG-GGCTGAGTAGGCTC-CTAAGCG--CCCCCACCCC-GGGGA--AG-----GGGCAAAATCACATCTTAAAACTTTAAGTCTCATAGTACTTTATGAAATAATGCAGGGTGTGTAACG-TGCATTCATTTATATGGTATTT-AAAATT-AATATTCTGAGTCAAATTTAATTTAACTTGAACCAGCTGTCAGCCCAAACA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96666252 213 + 98384682 ----------------------CTGCATGTT-TGCTAAGGTCCCT----TGTAAGG-GGCTGAGTAGGCTC-CTAAGCG--CCCCCACCCC-AGGGC--AG-----GGGCAAAATCACATCTTAAAACTTTAAGTCTCATAATACTTTATGAAATAATGCAGGGTGTGTAACC-TGCATTCATTTATATGGTATTT-AAAATT-AATATTCTGAGTCAAATTTAATTTAACTTGAACCAGCTGTCAGCCCAAACA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8211227 231 - 10857215 -TTTTCCTAAA--CC-ACGAGGCTGCACGTT-TGCTAAGGTCCCT----TGTAAGG-GGCTGAGTAGGCTC-CTAAGCG--CCCCCACCCC-GGGGA--AG-----GGGCAAAATCACATCTTAAAACTTTAAGTCTCATAATACTTTATGAAATAATGCAGGGTGTGTAACC-TGCATTCATTTATATGGTATTT-AAAATT-AATATTCTGAGTCAAATTTAATTTAACTTGAACCAGCTGTCAGCCCAAACA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15604430 232 - 23502949 TTTTTCCTAAA--CC-ATGAGACTGCATGTT-TGCTAAGGCCCCT----TGTAAGG-GGCTGAGTAGGCTC-CTAAGCG--CCCCCACCCC-GGGGC--AG-----GGGCAAAATCACATCTTAAAACTTTAAGTCTCATAATACTTTGTGAAATAATGCAGGGTGTGTAACC-TGCATTCATTTATATAGTATTT-AAAATT-AATATTCTGAGTCAAATTTAATTTAACTTGAACCAGCTGTCAGTCCAAATA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169877080 236 + 171630274 TTTTTCCGAAA--CC-ACGAGGCTGCACATT-TGCTGAGGCCCCT----AGTAAGG-GGCTGAGTAGGCTC-CTAAGCGGTCCCCTACCCCCGGGGC--AG-----GGGCAAAATCACATCTGAAAACTTTAAGTCTCATAATCCTTTATGAAATAATGCAGACTGTGTAAGCTTGCATTCATTTATATGGCATTT-AAAATT-AATGCTCTGGGTCCAATTTAATTTAACGTGAACCAGCTGTCAGCCCAAACA i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1245353 232 - 2164891 TTTTTCCTGAA--CC-ACGAGGCTGCACGTT-TGCTGAGGCCCCT----TGCAACG-CGCTGAGTAGGCTC-CTAAGCGGTTCCCCACCCCCGGGGC--AG-----GGGCAAAATCACATGTGAAAACTTCAAGTCTCATAATCCTTTATGAAATAATGCAGTGTGTGTAAGC-TGCATTCATTTATATGGCATTT-AAAATT-AATGCTCTGAGTCCAATTTAATTTAACGTGAACCAGCTGTCAGCCCAG--- i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1497788 233 - 1813869 TTTTTCCTAAA--CC-ACGAGGCTGCACGTT-TGCTGAGGCTCCC----TTTAACG-GGCTGAGTGGTCTCTCTAAGCGGTCCCCCACCCCGGGGCG--AG-----GGGCGAGATCACATCTAAAAACTTCAAGTCTCATAATCTTTTATGAAATAATGCAGAGTGTGTAAG--TGCATTCATATATATGGCATTT-AAAATT-AATGCTC-GAGTCCAATTTAATTTAACGT-AACCAGCTGTCAGGCCAAACA i aotNan1.NW_018494782v1 I 293 I 98 s otoGar3.GL873575 10945633 228 - 12073884 -TTTTCCTGAAACCC-AAGAGACTCCATGAT-TGCTGGGATACTT----TGTAAGGTGGAGGAGCAGGCTG-CCCAATA--CACAT------GGGGCCTCA-----GGCCAAAATCACATCTTAAAG-TTAATGTCTCACAATACTCCATGAAACAGTGCAGAGTGTATAGGC-TGT-TTCATTTATATAGTA-TT-AAAATT-AATATTCTGAGTCAGACTTAATTTAACTTGATCCAGCTGTCAGCCCAAACA i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56171118 203 + 122678785 TATTTCTTAGG--CCTATGGGACCTCATGAC------ATGCTCTTGGTCTGCGGGT-GGCCGGG-GGGCGT-CCAGGCA--CACA-------GGGCC--TT-----GGGTCAGGTGACATCCG------------CTCGTG---CTCTACAGAACGAGGCAGA--GCATAATC-TGTATTCTTTTACAGAGAATTT-ACGTCTGGGTATTCCGAGTCAGAATTACTTTAACGTGAACCAGCTGTCAGCC------ i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 563598 222 + 760995 -CTTTCCTATA--CCCATGAGGCAATATGATATGTTAAGTTCTCT----TGTACGT------------TTG-CTAAATA------CACACG-GGGGC--AGCTTTAGGTTGACATCACATTTTAAGG-TTTAAGGCTCATAATAATTTAAGAAATAATGTAGAATGTA-AACC-TGTCTTCATTTAGATAGTACTTAAAAATT-AATATTCTGAGTCAGATTACATTTAACTTAAACCAGCTGTCAGCCCAAAGA i dasNov3.JH569188 C 0 C 0 e saiBol1.JH378287 1286364 4583 - 2905041 I a score=758468.000000 s hg38.chr6_KB021644v2_alt 98552 100 + 185823 GCTTTCTTTCATTTTTTGAATTTCAGTACAC-CA--ACGATCATTGTAAACATTTCCACCCAAACTT--CTTC-----------ACATAAGTG--ATG--ATTAATT-CCCGTGTATCACT s panTro5.chr6 173550134 100 + 175400573 GCTTTCTTTCATTTTTTGAATTTCAGTACAC-CA--ACGATCATTGTAAACATTTCCACCCAAACTT--CTTC-----------ACATACGCG--ATG--ATTAATT-CCCGTGTATCACT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171788704 100 + 173848474 GCTTTCTTTCATTTTTTGAATTTCAGTACAC-CA--ACGATCATTGTAAACATTTCCACCCAAACTT--CTTC-----------ACATACGTG--ATG--ATTAATT-CCCGTGTATCACT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11470925 100 - 12463322 GCTTTGTTTCATTTTTTGAATTTCAGTACAC-CA--ACGATCATTGTAAACATTTCCACCCAAACTT--CTTC-----------ACGTACGTG--ATG--ATTAATT-CCCGTGTATCACT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156295525 100 + 157873769 GCTTTGTTTCGTTTTTTAAATTTCAGTACAC-CA--ACGATCATTGTAAACACTTCCACCCAAACTT--CTTC-----------ACATACGTG--ATG--ATTAATT-CCCCTGTATCGCT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170325327 100 + 172585720 GCTTTCTTTCATTTTTCAAATTTCAGTACAC-CA--AAGATTATTGCAAACACTTCCACCCAAACTT--CTTC-----------ACGTACGTG--ATG--ATTAATT-CCCTTGTCTCGCT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169070889 100 - 170955103 GCTTTCTTTCATTTTTCAAATTTCAGTACAC-CA--AAGATTATTGCAAACACTTCCACCCAAACTT--CTTC-----------ACGTACGTG--ATG--ATTAATT-CCCTTGTCTCGCT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8357337 100 + 10161646 GCTTTCTTTCATTTTTCAAATTTCAGTACAC-CA--AAGATTATTGCAAACACTTCCACCCAAACTT--CTTC-----------ACGTACGTG--ATG--ATTAATT-CCCTTGTCTCGCT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1388213 100 + 3144229 GCTTTCTTTCATTTTTCAAATTTCAGTACAC-CA--AAGATCATTGCAAACACTTCCACCCAAACTT--CTTC-----------ATGTACGTG--ATG--ATTAATT-CCCCTGTCTCGCT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96666465 100 + 98384682 GCTTTCTTTCATTTTTTAAATTTCGGTACAC-CA--AAGATCGTTGTAAACGCTTCCACCCAAACTT--CTTC-----------ATGTACGTG--ATG--ATTAATT-CCCCTGTCTCGCT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8211458 100 - 10857215 GCTTTCTTTCATTTTTCAAATTTCAGTACAC-CA--AAGATCATTGCAAACACTTCCACCCAAACTT--CTTC-----------ACGTACGTG--ATG--ATTAATT-CCCCTGTCTCGCT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15604662 100 - 23502949 GCTTTCTTTCATTTTTTAAATTTCAGTACAC-CA--AAGATCATTGTAAACACTTCCACCCAAACTT--CTTC-----------ACGTACCTG--ATG--ATTAATT-CCCCTGTCTCGCT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169877316 101 + 171630274 GATTTCTTTTATTTTTC-AATTTCAGTTCTC-TG--CAGAGCACTGTAAACACGTCCATCCACACTT--CTGC-----------ACACACGTGACATG--AGGAGCC-CCCTTGTCTCCGC i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1245585 95 - 2164891 ------CTTTATTTTTG-AATTTCAGTTCTC-CG--CAGAGCACTGTAAACACGTCCATCCACACTT--CTGC-----------ACACACATGACATG--AGGAGCC-CCCTTGTCTCTCC i cebCap1.NW_016107695v1 C 0 C 0 s otoGar3.GL873575 10945861 104 - 12073884 GCTTTCTTTTACTTTTTATATTTCAATATAC-CC-TGAAGTCATCTAAAATACTTCCATTCAGACTT--CTCC-----------ACATACATA--ATGTAATTAATTAACCATGTCTTGTT i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56171321 103 + 122678785 GTCTTCTTCTGCTGCT---GCTTCAATACACACT--AACGTCGCTGTAAATGTTTCTACTCGGACTTTGCTCC-----------ACACTCATAATATA--ATTAATTATCCTTGTCTCATC i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 563820 114 + 760995 CCtttttaaaattttttatatttCAATACAT-CCTTAAAATAATTGTAATTACTTCCACTCAAACTC--GTTCTGTGTAATTAACTACACAAA--GTA--ATTAATTATCCTTGTCTTGTT i dasNov3.JH569188 C 0 C 0 e saiBol1.JH378287 1286364 4583 - 2905041 I e aotNan1.NW_018494782v1 1498021 98 - 1813869 I a score=2260891.000000 s hg38.chr6_KB021644v2_alt 98652 219 + 185823 TTGTTCCTCGGTGATCACAAATTGCATTACACTCAAATTTCACTTAGTGAAAAAGGATGTTAATTTTTCCAGTTCCTATGATTC--TAGAATGGAAACACTTTTGGGAGTATTATTTCAAGATCTTGGGACCAGCAGTGAGGGAT-TTTAGAGTT----------------------------------------AAAGAATGGCTTGGCAGAGATACTTCCCATTG-TTTTATCCACT---GGAAGTTTGA-ATAGTGTGATGGGT s panTro5.chr6 173550234 221 + 175400573 TTGTTCCTCGGTGATCACAAATTGCATTACACTCAAATTTCACTTAGTGAAAAAGGATGTTAATTTTTCCAGTTCCTATGATTCTATAGAATGGAAACACTTTTGGGAGTATTATTTCAAGATCTTGTGACCAGCAGTGAGGGAT-TTTAGAGTT----------------------------------------AAAGAATGGCTTGGCAGAGATACTTCCCATTG-TTTTATCCACT---GGAAGTTTGA-ACAGTGTGATGGGT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171788804 219 + 173848474 TTGTTCCTCGGTGATCACAAATTGCATTACACTGAAATTTCACTTAGTGAAAAAGGATGTTAATTTTTCCAGTTCCTATGATTC--TAGAATGGAAACACTTTTGGGAGTATTATTTCAAGATCTTGTGACCAGCAGTGAGGGAT-TTTAGAGTT----------------------------------------AAAGAATGGCTTGGCAGAGATACTTCCCATTG-TTTTATCCACT---GGAAGTTTGA-ATAGTGTGATGGGT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11471025 218 - 12463322 TTGTTCCTCGGTGATCACAAATTGCATTACACTCAAATTTCACTTAGTGAAAAAGGATGTTAATTTTTCCAGTTCCTATGATTC--TAGAATGGAAACACTTTTGGGAGTATTATTTCAAGATCTTGTGACCAGCAGCGAGGGAT-TTTAGAGTT----------------------------------------AAAGAATGACTTGGCAGAGATACTT-CCATTG-TTTTATCCACT---GGAAGTTTGA-ATAGTGTGATGGGT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156295625 219 + 157873769 TTGTTCCTTGGTCATCACAAATTGCATTACACTCAAATTTCACTTAGTGAAAAAGGATCTTAATTTTTCCAGTTCCTATGATTC--TAGAATGGAAACACTTTTGGGAGTATTATTTCAAGATCTTATGACCAGCAGCAAGGGAT-TTTAGAGTT----------------------------------------AAAGAATGACTTGGCAGAGATATTTCCCATTG-TTTTATCCACT---GGAAGTTTGA-ATACTGTGATGGGT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170325427 219 + 172585720 TTGTTCCTCAGTGATCACAAATTGCGTTACACTCAAATTTCACTTAGTGAAAAGGGATGTTAATTTCTCCAGTTCCCATGATTC--TAGAATGGGAACACTCTGGGGAGTATTATTTCAAGATCTTATGACCAGCAGCAAGGGAT-TGTAGAGTT----------------------------------------AAAGAATGATTTGGCAGAGATATTTCCCATTG-TTCTATCCACT---GGGAGTTTGA-ATAGTGTGGTGGGT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169070989 219 - 170955103 TTGTTCCTCAGTGATCACAAATTGCGTTACACTCAAATTTCACTTAGTGAAAAGGGATGTTAATTTCTCCAGTTCCCATGATTC--TAGAATGGGAACACTCTGGGGAGTATTATTTCAAGATCTTATGACCAGCAGCAAGGGAT-TGTAGAGTT----------------------------------------AAAGAATGATTTGGCAGAGATATTTCCCATTG-TTCTATCCACT---GGGAGTTTGA-ATAGTGTGGTGGGT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8357437 219 + 10161646 TTGTTCCTCAGTGATCACAAATTGCGTTACACCCAAATTTCACTTAGTGAAAAGGGATGTTAATTTCTCCAGTTCCCATGATTC--TAGAATGGGAACACTCTGGGGAGTATTATTTCAAGATCTTATGACCAGCAGCAAGGGAT-TGTAGAGTT----------------------------------------AAAGAATGATTTGGCAGAGATATTTCCCATTG-TTCTATCCACT---GGGAGTTTGA-ATAGTGTGGTGGGT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1388313 218 + 3144229 TTGTTCCTCGGTGATCACAAATTGCGTTACACTCAAATTTCACTTCGTGAAAAGGGATGTTAATTTTTCTAGTTCCCACGATTC--CAGAATGGGAACACTTTGGGGAGTATTA-TTCAAGATCTTATGACCAGCAGCAAGGGAC-TGTAGAGTT----------------------------------------AAAGAATGATTTGGCAGAGATATTTCCCATTG-TTCTATCCACT---GGGAGTTTGA-ATAGTGTGGTGGGT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96666565 219 + 98384682 TTGTTCCTCGGTGATCACAAATTGCGTTACACTCAAATTTCACTTAGTGAAAAGGGATGTTAATTATTCCAGTTCCCATGATTC--TAGAATGGAAACACTTTGGGGAATATTATTTCAAGATCTTATGACCAGCAGCAAGGGAT-TGTAGAGTT----------------------------------------AAAGAATGATTTGGCAGGGATATTTCCCATTG-TTCTATCCTCT---GGAAGTTTGA-ATAGTGTGGTGGGT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8211558 219 - 10857215 TTGTTCCTCGGTGATCACAAATTGCGTTACACTCAAATTTCACTTCGTGAAAAGGGATGTTAATTTTTCCAGTTCCCACGATTC--CAGAATGGGAACACTTTGGGGAGTATTATTTCAAGATCTTATGACCAGCAGCAAGGGAC-TGTAGAGTT----------------------------------------AAAGAATGATTTGGCAGAGATATTTCCCATTG-TTCTATCCACT---GGGAGTTTGA-ATAGTGTGGTGGGT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15604762 219 - 23502949 TTGTTCCTCAGTGATCACAAATTGCATTGCACTCATATTTCACTTAGTAAAAAAGGATGTTAATTTTTCCAGTTCCCATGATTC--TAGAATGGAAACACTTTGGGGAGTATTATTTCAAGATCTTATGACCAGCAGCAAGGGAT-TGTAGAGTT----------------------------------------AAAGAATGATTTGGCAGAGATATTTCCCATTG-TTCTATCCACT---GGAAGTTTGA-ATAGTGTGGTGGGT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169877417 247 + 171630274 TTGTTCCTCAGTGA-----------ATCACACTCAATTTTAACTTAGTGAAGAAAGATGTTAATTTTTCCAGTCCCCATGATTC--TAGAATGAAAACACTTTTGGGAGTATTGCTTCAAGATTTCATGACC-GCAGCAAGGGAT-CTTAGCGTGTTCTTCACATGTGCCCCAAACCTAAAATGCAATTTAAAAAAAAGAATGACTTGGCAGAGAGAGTTCCCATTG-TTTTCTCCACT---GGAGGTTTGA-ATGGTGTGATGGGT i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1245680 212 - 2164891 TTGTTCCTCAGTGATCACAAATTGCATCACACTCAATTTTAACTTAGTGAAGAAGGATGTTAATTTTTCCAGTCCCCATGATTC--TAGAATGGAAACACTTTTCGGAGTACTGTTTCAAGATTTCATGACC-GCAGCAAGGGAT-CTT----------------------------------------------AAAGAATGACTTGGCAGAGAGAGTTCCCATTG-TTTTCTCCACT---GGAGGTTTGA-ATAGTGTGATGGGT i cebCap1.NW_016107695v1 C 0 I 207 s aotNan1.NW_018494782v1 1498119 208 - 1813869 TTGTTCCTCAGTGATCACAAATTGCATCACACTCAATTTTAACTTAGTGAAGAAGGATGTT-ATTTTTCCAGTCCC--TGAT----TAGAATGGAAATACTTTTGGGAGATTTGTGTCAAGATTTCATGACT-GCAGCAAGGGATGCTT----------------------------------------------AAAGAATGACTTGGCAGAGACAGTTCCTATTG-TTTTCTCCACT---GGAGGTTTGA-ATAGTGTGATGGGT i aotNan1.NW_018494782v1 I 98 I 183 s otoGar3.GL873575 10945965 218 - 12073884 TTGTTCCCCAGTGATCACAAATTACATTACATTCAAATTTAACTTAGTGGAAAAGGATGTTAATTTTCCCAAATCCCATTATTC--TAAGATGGAAATACTTATGTGGGTATTA-TTCAAAATTTCACGACCAGCAACCAGGGAT-TTTATAGTC----------------------------------------AAAGAGTGACTTGGCAGAGACATTTCTCATTC-TTTTCTCCAGT---GAAGTTTTGG-ATAATGTAAGGGGT i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56171424 219 + 122678785 CTCTTCCCTGGTGATCGCAAATTACATTACATTCAAATTCAACTTAGTGGAAAAGAATGTTAATTTTTCCAAAGTCCATTATTC--TAGAATGGAAACACTTATGTG-GTATTGTTTCAAAATTTCAAAATCAACAAAAAGGGAT-TTT---TCT----------------------------------------AAAGAGCGAC-TGGCAGGGGTATTTCTTGTTGCTTTTCTTCATTTCAAGAAGTTTCACGTGGTGTGATGGGT i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 563934 214 + 760995 TTGTTCTTTGGTGATCACAAATTGTATTGTATTCAAATTTAATTTAGCAGAAAAGGATGTTAATTTTTCCAAATCCCATTATTC--TAAAATGGAAACACTTAGGCAGATATTATTTCTGAGTTTCATGATCTGAGTCAAGGGAT-TTTCTAGTT----------------------------------------AAAGAATGACTTGGCAGGGACATTCCTCACTC-TT-----CATT---TTAGTTGTGG-ATAGTGTGATGGAT i dasNov3.JH569188 C 0 C 0 e saiBol1.JH378287 1286364 4583 - 2905041 I a score=714613.000000 s hg38.chr6_KB021644v2_alt 98871 101 + 185823 AATGGGCAGAAGAGAATAAAGCCTATTTCTCTTCTCTCAGAATTTGTGTATTAAAGGGACAATGTACACAAC---------CCCATTCCTCAGGATGCCAG----------CCCACTGGG s panTro5.chr6 173550455 101 + 175400573 AATGGACAGAAGAGAATAAAGCCTATTTCTGTTCTCTCAGAATTTGTGTATTAAAGGGACAATGTACACAAC---------CCCATTCCTCAGGATGCCAG----------CCCACTGGG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171789023 101 + 173848474 AATGGACAGAAGAGAATAAAGCCTATTTCTGTTCTCTCAGAATTTGTGTATTAAAGGGACAATGTACACAAC---------CCCATTCCTCAGGATGCCAG----------CCCACTGGG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11471243 100 - 12463322 AATGGACAGAAGAGAATAAAGCTTATTTCTGTTCTCTCAGAATTTGTGTATTAAAGGGACAATGTACACAAC---------CCCATTCCTCAGGATGCCAG-----------CCACTGGG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156295844 101 + 157873769 AATGGGCAGAAGAGAATAAAGCCTATTTCTGTTCTCTCAGAATTTGTGTATTAAAGGGACAATGTACACAAC---------CCCATTCCTCAGGATGCCAG----------CCCACTGGG i nomLeu3.chr3 C 0 I 26 s rheMac8.chr4 170325646 111 + 172585720 AATGGACAGAAGAGAAGAAAGCCTGTTTCTGTTCTCTCAGAATTTGTGTATTAAGGTGACAATGTATACAAC---------CCCATTCCTCAGGATGCCAGTGGATGCCACCCCACTGGG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169071208 111 - 170955103 AATGGACAGAAGAGAAGAAAGCCTGTTTCTGTTCTCTCAGAATTTGTGTATTAAGGGCACAATGTATACAAC---------CCCATTCCTCAGGATGCCAGTGGATGCCACCCCACTGGG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8357656 110 + 10161646 AATGGACAGAAGAGAAGAAAGCCTGTTTCTGTTCTCTCAGAATTTGTGTTTTAAGGGGACAATGTATACAAC---------CCCATTCCTCAGGATG-CAGTGGATGCCACCCCACTGGG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1388531 111 + 3144229 AGTGGACAGAAGAGAAGAAAGCCTATTTCTGTTCTCTCAGAATTTGTGTATTAAGGGGACAGTGTATACAAC---------CCCATTCCTCAGGACGCCAGTGGATGCCACCCCACTGGG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96666784 111 + 98384682 AATGGACAGAAGAGAAGAAAGCCTATTTCTGTTCTCTCAGAATTTGTGTATTAAGGGGACAATGTACATAAC---------CCCACTCCTCAGGACGCCAGTGGATGCCACCCCACTGGG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8211777 111 - 10857215 AATGGACAGAAGAGAAGAAAGCCTATTTCTGTTCTCTCAGAATTTGTGTATTAAGGGGACAGTGTATACAAC---------CCCATTCCTCAGGATGCCAGTGGATGCCACCCCACTGGG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15604981 111 - 23502949 AATGGACAGAAGAGAAGAAAGCCTATTTTTGTTCTCTCAGAATTTGTGTATTAAGAGGACAATGTACACAAC---------CCCACTCCTCAAGATACCAGTGGATGCCAGCCCACTGGG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169877664 113 + 171630274 CCTCAGCAGAGGAGAAGAAGGAGGATTTCTCTTCCCTCGGAATTTGTGTATCAAAGCGACGGCACACACAGCCACGTTCCTCACATTCCTCAAGATGCCAC-------AACCCTACAGGG i calJac3.chr4 C 0 C 0 s otoGar3.GL873575 10946183 108 - 12073884 ATTGTGCATAACAGAATAAA-CCTCCCCATTGTCTCTGGAGAGCCGTATGTTAGAGGGACAGTGTGCACAGC---------CACCTT-CTCAGGATGTCCC-TGACACAGCGCTCCTGAG i otoGar3.GL873575 C 0 I 1 s canFam3.chr1 56171643 100 + 122678785 AATGTACAGAATAGAATCAAATCCCTCTCTCTTCCCTCTGCGTTTACGTGTGAAGTGTGTGAGATACACACA---------CGCATTTCTCAGGATGGCAA-----------CTACTGTG i canFam3.chr1 C 0 I 2 s dasNov3.JH569188 564148 99 + 760995 TATGCACAGAATAAAAAAAAA---ATCTGTCTTCTCTCAGAATTTGTATATTAAAGTGAAAACATGCTCAAC---------CACATTTATCAGAATGCCAA------CAAACATATA--- i dasNov3.JH569188 C 0 C 0 e saiBol1.JH378287 1286364 4583 - 2905041 I e aotNan1.NW_018494782v1 1498327 183 - 1813869 I e cebCap1.NW_016107695v1 1245892 207 - 2164891 I a score=78504.000000 s hg38.chr6_KB021644v2_alt 98972 27 + 185823 TGTTATTCATTTGTCAGggacg----------tcatc----- s panTro5.chr6 173550556 27 + 175400573 TGTTATTCATTTGTCAGGGACG----------TCATC----- i panTro5.chr6 C 0 C 0 s panPan2.chr6 171789124 27 + 173848474 TGTTATTCATTTGTCAGGGACG----------TCATC----- i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11471343 27 - 12463322 TGTTATTCATTTGTCAGGGACG----------TCATC----- i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170325757 27 + 172585720 TGTTTTTTATTCATCAGGGACG----------TCATC----- i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169071319 27 - 170955103 TGTTTTTTATTCATCAGGGACG----------TCATC----- i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8357766 27 + 10161646 TGTTTTTTATTCATCAGGGACG----------TCATC----- i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1388642 27 + 3144229 TGCTTTTCATTCATCAGGGACG----------TCATC----- i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96666895 15 + 98384682 TGTTTTTCAT----------------------TCATC----- i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8211888 27 - 10857215 TGCTTTTCATTCATCAGGGACG----------TCATC----- i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15605092 15 - 23502949 TGTGTTTCAT----------------------TCATC----- i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169877777 27 + 171630274 TGTGAGTCACTCCTCTGGGATA----------TCATC----- i calJac3.chr4 C 0 C 0 s otoGar3.GL873575 10946292 27 - 12073884 CGTGGGCCAAGTGGGAGCTTTG----------CTACC----- i otoGar3.GL873575 I 1 C 0 s canFam3.chr1 56171745 37 + 122678785 TTTTATGGGCACGATGGGGACGAGGGGGGTTCTTGTC----- i canFam3.chr1 I 2 I 2 s dasNov3.JH569188 564247 32 + 760995 TTTTATTGATATGTTGGAGATG----------TTTTGTTATT i dasNov3.JH569188 C 0 C 0 e saiBol1.JH378287 1286364 4583 - 2905041 I e aotNan1.NW_018494782v1 1498327 183 - 1813869 I e cebCap1.NW_016107695v1 1245892 207 - 2164891 I e nomLeu3.chr3 156295945 26 + 157873769 I a score=225937.000000 s hg38.chr6_KB021644v2_alt 98999 33 + 185823 cagttagaaaagctcagcaactgaccttgtgct s panTro5.chr6 173550583 33 + 175400573 CAGTTAGAAAAGCTCAGCAACTGACCTTGTGCT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171789151 33 + 173848474 CAGTTAGAAAAGCTCAGCAACTGACCTTGTGCT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11471370 33 - 12463322 CAGTTAGAAAAGCTCAGCAACTGACCTTGTGCT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156295971 33 + 157873769 gagaaagaAAAGCTCAGCGACTGACCTTGTGCT i nomLeu3.chr3 I 26 C 0 s rheMac8.chr4 170325784 33 + 172585720 CAGTTAGAAAAGCTCAGCGACTGACCTTGTGCT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169071346 33 - 170955103 CAGTTAGAAAAGCTCAGCGACTGACCTTGTGCT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8357793 33 + 10161646 CAGTTAGAAAAGCTCAGCGACTGACCTTGTGCT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1388669 33 + 3144229 CAGTTAGAAAAGCTCAGCGACTGACCTTGTGCT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96666910 33 + 98384682 CAGTTAGAAAACCTCAACGACTGACCTTGTGCT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8211915 33 - 10857215 CAGTTAGAAAAGCTCAGCGACTGACCTTGTGCT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15605107 33 - 23502949 CAGTTAGAAAAGCTCAACGACTGACCTTGTGCT i colAng1.NW_012114488v1 C 0 I 9 s calJac3.chr4 169877804 26 + 171630274 CATATTAAAAAGCTCCGGGACTGCCT------- i calJac3.chr4 C 0 C 0 s otoGar3.GL873575 10946319 27 - 12073884 CAGCTGGGAAAGCCACACAACTGACCT------ i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56171784 33 + 122678785 CAGGCTGGAAAGCTGAATTACTGATTTCCTGCT i canFam3.chr1 I 2 C 0 s dasNov3.JH569188 564279 29 + 760995 CAGTTAGAAAAGTT----ACCTTCTTTCCTGCT i dasNov3.JH569188 C 0 C 0 e saiBol1.JH378287 1286364 4583 - 2905041 I e aotNan1.NW_018494782v1 1498327 183 - 1813869 I e cebCap1.NW_016107695v1 1245892 207 - 2164891 I a score=43771.000000 s hg38.chr6_KB021644v2_alt 99032 13 + 185823 ggctgctatctat s panTro5.chr6 173550616 13 + 175400573 GGCTGCTATCTAT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171789184 13 + 173848474 GGCTGCTATCTAT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11471403 13 - 12463322 GGCTGCTATCTAT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156296004 13 + 157873769 GGCTGCTACCTAC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170325817 12 + 172585720 -GCTGCTGCCgag i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169071379 12 - 170955103 -GCTGCTGCCgag i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8357826 12 + 10161646 -GCTGCTGCCTag i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1388702 12 + 3144229 -GCTGCTGCCTag i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96666943 12 + 98384682 -GCTGCTGCCgag i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8211948 12 - 10857215 -GCTGCTGCCgag i manLeu1.NW_012106474v1 C 0 C 0 s otoGar3.GL873575 10946346 13 - 12073884 GCCCACTCCTCCT i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56171817 10 + 122678785 ---TACTACCCCT i canFam3.chr1 C 0 I 21 s dasNov3.JH569188 564308 13 + 760995 TGTTCCTACCAAC i dasNov3.JH569188 C 0 C 0 e saiBol1.JH378287 1286364 4583 - 2905041 I e aotNan1.NW_018494782v1 1498327 183 - 1813869 I e cebCap1.NW_016107695v1 1245892 207 - 2164891 I e calJac3.chr4 169877830 0 + 171630274 C e colAng1.NW_012114488v1 15605140 9 - 23502949 I a score=22099.000000 s hg38.chr6_KB021644v2_alt 99045 5 + 185823 ggaga s panTro5.chr6 173550629 5 + 175400573 Ggaga i panTro5.chr6 C 0 C 0 s panPan2.chr6 171789197 5 + 173848474 Ggaga i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11471416 5 - 12463322 Ggaga i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156296017 5 + 157873769 ggtgg i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170325829 5 + 172585720 agaga i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169071391 5 - 170955103 agaga i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8357838 5 + 10161646 agaga i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1388714 5 + 3144229 agaga i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96666955 5 + 98384682 agaga i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8211960 5 - 10857215 agaga i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169877830 5 + 171630274 ggagg i calJac3.chr4 C 0 C 0 s otoGar3.GL873575 10946359 5 - 12073884 GCAGA i otoGar3.GL873575 C 0 I 2 s dasNov3.JH569188 564321 4 + 760995 AGAG- i dasNov3.JH569188 C 0 C 0 e saiBol1.JH378287 1286364 4583 - 2905041 I e aotNan1.NW_018494782v1 1498327 183 - 1813869 I e cebCap1.NW_016107695v1 1245892 207 - 2164891 I e colAng1.NW_012114488v1 15605140 9 - 23502949 I e canFam3.chr1 56171827 21 + 122678785 I a score=65406.000000 s hg38.chr6_KB021644v2_alt 99050 26 + 185823 gagagagag------------agagagagagagagagg s panTro5.chr6 173550634 26 + 175400573 gagagagag------------agagagagagagagagg i panTro5.chr6 C 0 C 0 s panPan2.chr6 171789202 26 + 173848474 gagagagag------------agagagagaggaggagg i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11471421 26 - 12463322 gagagagag------------agagagagagagagaga i gorGor5.CYUI01015032v1 C 0 I 20 s nomLeu3.chr3 156296022 38 + 157873769 ggggggggggggtgtgggggCagcgagagagagaaaga i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170325834 22 + 172585720 gagagagaa------------agggagagagaga---- i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169071396 22 - 170955103 gagagagaa------------agggagagagaga---- i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8357843 21 + 10161646 gagagagag------------agagaaagggag----- i macNem1.NW_012011000v1 C 0 I 334 s cerAty1.NW_012002071v1 1388719 22 + 3144229 gagagagaa------------agagagagagaaa---- i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96666960 20 + 98384682 gagaaag--------------ggagagagagaaa---- i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8211965 22 - 10857215 gagagagaa------------agagagagagaaa---- i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169877835 20 + 171630274 gagggaggg------------aggcggggagg------ i calJac3.chr4 C 0 C 0 e otoGar3.GL873575 10946364 2 - 12073884 I e saiBol1.JH378287 1286364 4583 - 2905041 I e aotNan1.NW_018494782v1 1498327 183 - 1813869 I e cebCap1.NW_016107695v1 1245892 207 - 2164891 I e dasNov3.JH569188 564325 0 + 760995 C e colAng1.NW_012114488v1 15605140 9 - 23502949 I e canFam3.chr1 56171827 21 + 122678785 I a score=10990.000000 s hg38.chr6_KB021644v2_alt 99076 3 + 185823 gag s panTro5.chr6 173550660 3 + 175400573 gag i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11471467 3 - 12463322 gag i gorGor5.CYUI01015032v1 I 20 C 0 s nomLeu3.chr3 156296060 3 + 157873769 gag i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170325856 3 + 172585720 aag i rheMac8.chr4 C 0 I 4 s macFas5.chr4 169071418 3 - 170955103 aag i macFas5.chr4 C 0 C 0 s cerAty1.NW_012002071v1 1388741 3 + 3144229 gag i cerAty1.NW_012002071v1 C 0 I 2 s chlSab2.chr13 96666980 3 + 98384682 gag i chlSab2.chr13 C 0 I 2 s manLeu1.NW_012106474v1 8211987 3 - 10857215 gag i manLeu1.NW_012106474v1 C 0 I 2 s calJac3.chr4 169877855 3 + 171630274 gag i calJac3.chr4 C 0 C 0 e otoGar3.GL873575 10946364 2 - 12073884 I e saiBol1.JH378287 1286364 4583 - 2905041 I e aotNan1.NW_018494782v1 1498327 183 - 1813869 I e cebCap1.NW_016107695v1 1245892 207 - 2164891 I e dasNov3.JH569188 564325 0 + 760995 C e colAng1.NW_012114488v1 15605140 9 - 23502949 I e canFam3.chr1 56171827 21 + 122678785 I e macNem1.NW_012011000v1 8357864 334 + 10161646 I e panPan2.chr6 171789228 0 + 173848474 C a score=9218.000000 s hg38.chr6_KB021644v2_alt 99079 7 + 185823 ggaagga s panTro5.chr6 173550663 7 + 175400573 ggaggga i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11471470 7 - 12463322 ggaagga i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156296063 7 + 157873769 agagaga i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170325863 3 + 172585720 ----tga i rheMac8.chr4 I 4 C 0 s macFas5.chr4 169071421 7 - 170955103 agactga i macFas5.chr4 C 0 C 0 s cerAty1.NW_012002071v1 1388746 7 + 3144229 agagaga i cerAty1.NW_012002071v1 I 2 C 0 s chlSab2.chr13 96666985 7 + 98384682 acacaca i chlSab2.chr13 I 2 C 0 s manLeu1.NW_012106474v1 8211992 7 - 10857215 agagaga i manLeu1.NW_012106474v1 I 2 C 0 s calJac3.chr4 169877858 7 + 171630274 ggaagga i calJac3.chr4 C 0 C 0 e otoGar3.GL873575 10946364 2 - 12073884 I e saiBol1.JH378287 1286364 4583 - 2905041 I e aotNan1.NW_018494782v1 1498327 183 - 1813869 I e cebCap1.NW_016107695v1 1245892 207 - 2164891 I e dasNov3.JH569188 564325 0 + 760995 C e colAng1.NW_012114488v1 15605140 9 - 23502949 I e canFam3.chr1 56171827 21 + 122678785 I e macNem1.NW_012011000v1 8357864 334 + 10161646 I e panPan2.chr6 171789228 0 + 173848474 C a score=3194.000000 s hg38.chr6_KB021644v2_alt 99086 2 + 185823 ga s panTro5.chr6 173550670 2 + 175400573 ag i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11471477 2 - 12463322 ga i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156296070 2 + 157873769 ga i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170325866 2 + 172585720 ga i rheMac8.chr4 C 0 I 4 s macFas5.chr4 169071428 2 - 170955103 ga i macFas5.chr4 C 0 C 0 s cerAty1.NW_012002071v1 1388753 2 + 3144229 ga i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96666992 2 + 98384682 ca i chlSab2.chr13 C 0 I 2 s manLeu1.NW_012106474v1 8211999 2 - 10857215 ga i manLeu1.NW_012106474v1 C 0 I 2 e otoGar3.GL873575 10946364 2 - 12073884 I e saiBol1.JH378287 1286364 4583 - 2905041 I e aotNan1.NW_018494782v1 1498327 183 - 1813869 I e cebCap1.NW_016107695v1 1245892 207 - 2164891 I e calJac3.chr4 169877865 0 + 171630274 C e dasNov3.JH569188 564325 0 + 760995 C e colAng1.NW_012114488v1 15605140 9 - 23502949 I e canFam3.chr1 56171827 21 + 122678785 I e macNem1.NW_012011000v1 8357864 334 + 10161646 I e panPan2.chr6 171789228 0 + 173848474 C a score=44281.000000 s hg38.chr6_KB021644v2_alt 99088 28 + 185823 gagagagaa--------------agagacagagagag----atgga s panTro5.chr6 173550672 28 + 175400573 gagagagag--------------agagagagaaagag----agaga i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11471479 30 - 12463322 gagagagagaa------------agagacagagagag----acaga i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156296072 28 + 157873769 gagagagaa--------------agagagagagaggg----agaga i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170325872 42 + 172585720 gagagaaag--agacacacacacagagagagaaagag--acacaga i rheMac8.chr4 I 4 C 0 s macFas5.chr4 169071430 46 - 170955103 gagagagagaaagacacacacacagagagagagaaagacacacaga i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8358198 28 + 10161646 gagagagag--------------agggagagagagag----actga i macNem1.NW_012011000v1 I 334 C 0 s cerAty1.NW_012002071v1 1388755 26 + 3144229 gagagaaag--------------agagacagagagtg------aga i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96666996 24 + 98384682 cagagaa----------------agagacagagagag------aga i chlSab2.chr13 I 2 C 0 s manLeu1.NW_012106474v1 8212003 26 - 10857215 gaaagaaag--------------agagacagagagtg------aga i manLeu1.NW_012106474v1 I 2 C 0 s dasNov3.JH569188 564325 16 + 760995 --------------------------GACAAAAAGCA----ATTTA i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10946364 2 - 12073884 I e saiBol1.JH378287 1286364 4583 - 2905041 I e aotNan1.NW_018494782v1 1498327 183 - 1813869 I e cebCap1.NW_016107695v1 1245892 207 - 2164891 I e calJac3.chr4 169877865 0 + 171630274 C e colAng1.NW_012114488v1 15605140 9 - 23502949 I e canFam3.chr1 56171827 21 + 122678785 I e panPan2.chr6 171789228 0 + 173848474 C a score=26409.000000 s hg38.chr6_KB021644v2_alt 99116 10 + 185823 gaaagagaca s panTro5.chr6 173550700 10 + 175400573 gatggagaaa i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11471509 10 - 12463322 gaaagagaca i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156296100 10 + 157873769 gaaagagaca i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170325914 10 + 172585720 gagagagaga i rheMac8.chr4 C 0 I 4 s macFas5.chr4 169071476 10 - 170955103 gagagagaga i macFas5.chr4 C 0 I 4 s macNem1.NW_012011000v1 8358226 10 + 10161646 gagagaaaga i macNem1.NW_012011000v1 C 0 I 4 s cerAty1.NW_012002071v1 1388781 10 + 3144229 gaaagagaca i cerAty1.NW_012002071v1 C 0 I 333 s chlSab2.chr13 96667020 9 + 98384682 gagagaga-a i chlSab2.chr13 C 0 I 1 s manLeu1.NW_012106474v1 8212029 10 - 10857215 gaaagagaca i manLeu1.NW_012106474v1 C 0 I 1 e otoGar3.GL873575 10946364 2 - 12073884 I e saiBol1.JH378287 1286364 4583 - 2905041 I e aotNan1.NW_018494782v1 1498327 183 - 1813869 I e cebCap1.NW_016107695v1 1245892 207 - 2164891 I e calJac3.chr4 169877865 0 + 171630274 C e dasNov3.JH569188 564341 0 + 760995 C e colAng1.NW_012114488v1 15605140 9 - 23502949 I e canFam3.chr1 56171827 21 + 122678785 I e panPan2.chr6 171789228 0 + 173848474 C a score=88516.000000 s hg38.chr6_KB021644v2_alt 99126 46 + 185823 gagagagggagagagagaaagagagagagac----agaaagagacggaga s panTro5.chr6 173550710 44 + 175400573 gaga----gagagagagaaagagagagagaca--gagaaagagacggaga i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11471519 50 - 12463322 gagggagagagggagagagagaaagagagacagggagacagagaaagaga i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156296110 48 + 157873769 cagagagagaaagagagacagggagagagaga--gagaaagagacagaga i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170325928 43 + 172585720 --g-aagggggagagagagagagagagagaaa--gggagagagacaga-- i rheMac8.chr4 I 4 C 0 s macFas5.chr4 169071490 44 - 170955103 --gaaagggggagagagagagagagagagaaa--gggagagagacaga-- i macFas5.chr4 I 4 C 0 s macNem1.NW_012011000v1 8358240 44 + 10161646 --gggatagagagagagagggagagagagagg--gagagagagacaga-- i macNem1.NW_012011000v1 I 4 C 0 s cerAty1.NW_012002071v1 1389124 44 + 3144229 --gggagaggcagagagagagagagggagaga--cagagagagagagg-- i cerAty1.NW_012002071v1 I 333 C 0 s chlSab2.chr13 96667030 38 + 98384682 --------gggagagagagagagagaaagaga--cagagagagagaaa-- i chlSab2.chr13 I 1 C 0 s manLeu1.NW_012106474v1 8212040 38 - 10857215 --------gggagagagagagacagagagaga--gagggagagacaga-- i manLeu1.NW_012106474v1 I 1 C 0 e otoGar3.GL873575 10946364 2 - 12073884 I e saiBol1.JH378287 1286364 4583 - 2905041 I e aotNan1.NW_018494782v1 1498327 183 - 1813869 I e cebCap1.NW_016107695v1 1245892 207 - 2164891 I e calJac3.chr4 169877865 0 + 171630274 C e dasNov3.JH569188 564341 0 + 760995 C e colAng1.NW_012114488v1 15605140 9 - 23502949 I e canFam3.chr1 56171827 21 + 122678785 I e panPan2.chr6 171789228 0 + 173848474 C a score=67966.000000 s hg38.chr6_KB021644v2_alt 99172 18 + 185823 gagagggagagagagaga s panTro5.chr6 173550754 16 + 175400573 gagagg--gagagagaga i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11471569 18 - 12463322 cagagggagagagaggga i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156296158 18 + 157873769 gagagagagagagagaga i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170325971 18 + 172585720 gaaaggaagagagagaga i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169071534 18 - 170955103 gaaaggaagagagagaga i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8358284 18 + 10161646 gagagaaagagagaggga i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1389168 18 + 3144229 gagagacagagagagaga i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96667068 18 + 98384682 gagacacagagagagaga i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8212078 18 - 10857215 gagagacagagagggaga i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15605149 18 - 23502949 gagagagagagagagaga i colAng1.NW_012114488v1 I 9 C 0 e otoGar3.GL873575 10946364 2 - 12073884 I e saiBol1.JH378287 1286364 4583 - 2905041 I e aotNan1.NW_018494782v1 1498327 183 - 1813869 I e cebCap1.NW_016107695v1 1245892 207 - 2164891 I e calJac3.chr4 169877865 0 + 171630274 C e dasNov3.JH569188 564341 0 + 760995 C e canFam3.chr1 56171827 21 + 122678785 I e panPan2.chr6 171789228 0 + 173848474 C a score=60183.000000 s hg38.chr6_KB021644v2_alt 99190 17 + 185823 aggagagagaaagagac s panTro5.chr6 173550770 17 + 175400573 aggagagagaaagagac i panTro5.chr6 C 0 C 0 s panPan2.chr6 171789228 17 + 173848474 aggagagagagagagag i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11471587 15 - 12463322 --gagagagaaggagag i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170325989 17 + 172585720 gagagagagaaagagac i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169071552 17 - 170955103 gagagagagaaagagac i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8358302 17 + 10161646 cagagagagagagaggg i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1389186 17 + 3144229 gggagagacagagagag i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96667086 17 + 98384682 gagagaaaaagagagac i chlSab2.chr13 C 0 I 6 s manLeu1.NW_012106474v1 8212096 17 - 10857215 gagagagacagagagag i manLeu1.NW_012106474v1 C 0 I 211 s colAng1.NW_012114488v1 15605167 17 - 23502949 gagagagagagagagag i colAng1.NW_012114488v1 C 0 C 0 e otoGar3.GL873575 10946364 2 - 12073884 I e saiBol1.JH378287 1286364 4583 - 2905041 I e aotNan1.NW_018494782v1 1498327 183 - 1813869 I e cebCap1.NW_016107695v1 1245892 207 - 2164891 I e calJac3.chr4 169877865 0 + 171630274 C e dasNov3.JH569188 564341 0 + 760995 C e canFam3.chr1 56171827 21 + 122678785 I e nomLeu3.chr3 156296176 0 + 157873769 C a score=13083.000000 s hg38.chr6_KB021644v2_alt 99207 5 + 185823 ggaga s panTro5.chr6 173550787 5 + 175400573 ggaga i panTro5.chr6 C 0 C 0 s panPan2.chr6 171789245 5 + 173848474 agaga i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11471602 5 - 12463322 agaga i gorGor5.CYUI01015032v1 C 0 I 142 s rheMac8.chr4 170326006 3 + 172585720 --aga i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169071569 3 - 170955103 --aga i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8358319 3 + 10161646 --aga i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1389203 3 + 3144229 --aga i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96667109 5 + 98384682 tgaga i chlSab2.chr13 I 6 C 0 s manLeu1.NW_012106474v1 8212324 3 - 10857215 --gga i manLeu1.NW_012106474v1 I 211 C 0 s colAng1.NW_012114488v1 15605184 3 - 23502949 --aga i colAng1.NW_012114488v1 C 0 C 0 e otoGar3.GL873575 10946364 2 - 12073884 I e saiBol1.JH378287 1286364 4583 - 2905041 I e aotNan1.NW_018494782v1 1498327 183 - 1813869 I e cebCap1.NW_016107695v1 1245892 207 - 2164891 I e calJac3.chr4 169877865 0 + 171630274 C e dasNov3.JH569188 564341 0 + 760995 C e canFam3.chr1 56171827 21 + 122678785 I e nomLeu3.chr3 156296176 0 + 157873769 C a score=121062.000000 s hg38.chr6_KB021644v2_alt 99212 39 + 185823 gagagaga-g----agggagaga--------gagagagagaaaaagaaagag s panTro5.chr6 173550792 47 + 175400573 gagagagg-g----agagagagagagggagggagagagagagagagaaagag i panTro5.chr6 C 0 C 0 s panPan2.chr6 171789250 39 + 173848474 gagagaga-g----agagagaga--------gagagagagagagagagagaa i panPan2.chr6 C 0 I 17 s gorGor5.CYUI01015032v1 11471749 39 - 12463322 gagagaga-g----aaggagaga--------gagacagagggagagagagag i gorGor5.CYUI01015032v1 I 142 C 0 s rheMac8.chr4 170326009 43 + 172585720 gagaaaga-gacacagagagaga--------gagagaaagagagacagaaag i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169071572 43 - 170955103 gagaaaga-gacacagagagaga--------gagagaaagagagacagaaag i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8358322 37 + 10161646 gagagag-------agggagaga--------gagagagggagagagagagag i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1389206 41 + 3144229 gagggaga-gac--agagagaga--------gagggagagacagagagagag i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96667114 40 + 98384682 gaaagagacg----ggggagaga--------gagacagagagagagggaaag i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8212327 39 - 10857215 gagagaga-g----ggagagaga--------gatggagagagagagggagag i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15605187 39 - 23502949 aagggaga-g----aaagggaga--------gagagaaagagacacagagag i colAng1.NW_012114488v1 C 0 C 0 e otoGar3.GL873575 10946364 2 - 12073884 I e saiBol1.JH378287 1286364 4583 - 2905041 I e aotNan1.NW_018494782v1 1498327 183 - 1813869 I e cebCap1.NW_016107695v1 1245892 207 - 2164891 I e calJac3.chr4 169877865 0 + 171630274 C e dasNov3.JH569188 564341 0 + 760995 C e canFam3.chr1 56171827 21 + 122678785 I e nomLeu3.chr3 156296176 0 + 157873769 C a score=31861.000000 s hg38.chr6_KB021644v2_alt 99251 12 + 185823 acagagaaagac s panTro5.chr6 173550839 12 + 175400573 acagagaaagag i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11471788 10 - 12463322 --agagggagag i gorGor5.CYUI01015032v1 C 0 I 2 s rheMac8.chr4 170326052 12 + 172585720 tgagagaaagag i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169071615 12 - 170955103 tgagagaaagag i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8358359 12 + 10161646 gcagagagagaa i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1389247 12 + 3144229 agggagagagag i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96667154 12 + 98384682 acagagagagag i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8212366 12 - 10857215 acagagagagag i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15605226 12 - 23502949 agagagagagaa i colAng1.NW_012114488v1 C 0 C 0 e otoGar3.GL873575 10946364 2 - 12073884 I e saiBol1.JH378287 1286364 4583 - 2905041 I e aotNan1.NW_018494782v1 1498327 183 - 1813869 I e cebCap1.NW_016107695v1 1245892 207 - 2164891 I e calJac3.chr4 169877865 0 + 171630274 C e dasNov3.JH569188 564341 0 + 760995 C e canFam3.chr1 56171827 21 + 122678785 I e nomLeu3.chr3 156296176 0 + 157873769 C e panPan2.chr6 171789289 17 + 173848474 I a score=49198.000000 s hg38.chr6_KB021644v2_alt 99263 13 + 185823 agggagagagaga s panTro5.chr6 173550851 13 + 175400573 agagggagagaga i panTro5.chr6 C 0 C 0 s panPan2.chr6 171789306 13 + 173848474 agagagagagaga i panPan2.chr6 I 17 C 0 s gorGor5.CYUI01015032v1 11471800 13 - 12463322 agagagagggaga i gorGor5.CYUI01015032v1 I 2 C 0 s rheMac8.chr4 170326064 13 + 172585720 atggggagagaga i rheMac8.chr4 C 0 I 2 s macFas5.chr4 169071627 13 - 170955103 atggggagagaga i macFas5.chr4 C 0 I 263 s macNem1.NW_012011000v1 8358371 13 + 10161646 aaggacagagaga i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1389259 13 + 3144229 agggagagacaga i cerAty1.NW_012002071v1 C 0 I 3 s chlSab2.chr13 96667166 13 + 98384682 aaggagagagaga i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8212378 13 - 10857215 agggagagacaga i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15605238 13 - 23502949 agggagagagaga i colAng1.NW_012114488v1 C 0 C 0 e otoGar3.GL873575 10946364 2 - 12073884 I e saiBol1.JH378287 1286364 4583 - 2905041 I e aotNan1.NW_018494782v1 1498327 183 - 1813869 I e cebCap1.NW_016107695v1 1245892 207 - 2164891 I e calJac3.chr4 169877865 0 + 171630274 C e dasNov3.JH569188 564341 0 + 760995 C e canFam3.chr1 56171827 21 + 122678785 I e nomLeu3.chr3 156296176 0 + 157873769 C a score=4627.000000 s hg38.chr6_KB021644v2_alt 99276 2 + 185823 ga s panTro5.chr6 173550864 2 + 175400573 gg i panTro5.chr6 C 0 C 0 s panPan2.chr6 171789319 2 + 173848474 ga i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11471813 2 - 12463322 ga i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170326079 2 + 172585720 ca i rheMac8.chr4 I 2 C 0 s macFas5.chr4 169071903 2 - 170955103 ga i macFas5.chr4 I 263 C 0 s cerAty1.NW_012002071v1 1389275 2 + 3144229 gg i cerAty1.NW_012002071v1 I 3 C 0 s chlSab2.chr13 96667179 2 + 98384682 ga i chlSab2.chr13 C 0 I 9872 s manLeu1.NW_012106474v1 8212391 2 - 10857215 ga i manLeu1.NW_012106474v1 C 0 I 7 s colAng1.NW_012114488v1 15605251 2 - 23502949 ga i colAng1.NW_012114488v1 C 0 I 10 e otoGar3.GL873575 10946364 2 - 12073884 I e saiBol1.JH378287 1286364 4583 - 2905041 I e aotNan1.NW_018494782v1 1498327 183 - 1813869 I e cebCap1.NW_016107695v1 1245892 207 - 2164891 I e calJac3.chr4 169877865 0 + 171630274 C e dasNov3.JH569188 564341 0 + 760995 C e canFam3.chr1 56171827 21 + 122678785 I e nomLeu3.chr3 156296176 0 + 157873769 C e macNem1.NW_012011000v1 8358384 0 + 10161646 C a score=10503.000000 s hg38.chr6_KB021644v2_alt 99278 15 + 185823 ----gacagagagacac-ac s panTro5.chr6 173550866 15 + 175400573 ----gagagagagagac-ag i panTro5.chr6 C 0 C 0 s panPan2.chr6 171789321 12 + 173848474 ----gagagagagaga---- i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11471815 16 - 12463322 ----gagagagagaggagag i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170326081 15 + 172585720 gagagagggaaagac----- i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169071905 15 - 170955103 gagagagagacagag----- i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8358384 11 + 10161646 ----gagagacagag----- i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1389277 15 + 3144229 aagagagagagagac----- i cerAty1.NW_012002071v1 C 0 C 0 s manLeu1.NW_012106474v1 8212400 15 - 10857215 gagagagagagagac----- i manLeu1.NW_012106474v1 I 7 C 0 s colAng1.NW_012114488v1 15605263 15 - 23502949 AAAGCAAAGAGAGAG----- i colAng1.NW_012114488v1 I 10 C 0 e otoGar3.GL873575 10946364 2 - 12073884 I e saiBol1.JH378287 1286364 4583 - 2905041 I e aotNan1.NW_018494782v1 1498327 183 - 1813869 I e cebCap1.NW_016107695v1 1245892 207 - 2164891 I e calJac3.chr4 169877865 0 + 171630274 C e dasNov3.JH569188 564341 0 + 760995 C e canFam3.chr1 56171827 21 + 122678785 I e chlSab2.chr13 96667181 9872 + 98384682 I e nomLeu3.chr3 156296176 0 + 157873769 C a score=4095.000000 s hg38.chr6_KB021644v2_alt 99293 1 + 185823 a s panTro5.chr6 173550881 1 + 175400573 a i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11471831 1 - 12463322 a i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170326096 1 + 172585720 a i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169071920 1 - 170955103 a i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8358395 1 + 10161646 a i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1389292 1 + 3144229 a i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96677053 1 + 98384682 a i chlSab2.chr13 I 9872 C 0 s manLeu1.NW_012106474v1 8212415 1 - 10857215 a i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15605278 1 - 23502949 A i colAng1.NW_012114488v1 C 0 C 0 e otoGar3.GL873575 10946364 2 - 12073884 I e saiBol1.JH378287 1286364 4583 - 2905041 I e aotNan1.NW_018494782v1 1498327 183 - 1813869 I e cebCap1.NW_016107695v1 1245892 207 - 2164891 I e calJac3.chr4 169877865 0 + 171630274 C e dasNov3.JH569188 564341 0 + 760995 C e canFam3.chr1 56171827 21 + 122678785 I e nomLeu3.chr3 156296176 0 + 157873769 C e panPan2.chr6 171789333 0 + 173848474 C a score=36658.000000 s hg38.chr6_KB021644v2_alt 99294 9 + 185823 gagagagag s panTro5.chr6 173550882 9 + 175400573 gagagtgtg i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11471832 9 - 12463322 gagagagag i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170326097 9 + 172585720 gagagagag i rheMac8.chr4 C 0 I 270 s macFas5.chr4 169071921 9 - 170955103 gagagagag i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8358396 9 + 10161646 gagagagag i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1389293 9 + 3144229 gagagagag i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96677054 9 + 98384682 gagagagaC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8212416 9 - 10857215 gagagagag i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15605279 9 - 23502949 GAGAGAgtg i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169877865 9 + 171630274 gAAAGAAAG i calJac3.chr4 C 0 C 0 e otoGar3.GL873575 10946364 2 - 12073884 I e saiBol1.JH378287 1286364 4583 - 2905041 I e aotNan1.NW_018494782v1 1498327 183 - 1813869 I e cebCap1.NW_016107695v1 1245892 207 - 2164891 I e dasNov3.JH569188 564341 0 + 760995 C e canFam3.chr1 56171827 21 + 122678785 I e nomLeu3.chr3 156296176 0 + 157873769 C e panPan2.chr6 171789333 0 + 173848474 C a score=54.000000 s hg38.chr6_KB021644v2_alt 99303 1 + 185823 t s panTro5.chr6 173550891 1 + 175400573 t i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11471841 1 - 12463322 a i gorGor5.CYUI01015032v1 C 0 C 0 s calJac3.chr4 169877874 1 + 171630274 T i calJac3.chr4 C 0 C 0 s canFam3.chr1 56171848 1 + 122678785 T i canFam3.chr1 I 21 C 0 e otoGar3.GL873575 10946364 2 - 12073884 I e saiBol1.JH378287 1286364 4583 - 2905041 I e aotNan1.NW_018494782v1 1498327 183 - 1813869 I e cebCap1.NW_016107695v1 1245892 207 - 2164891 I e dasNov3.JH569188 564341 0 + 760995 C e colAng1.NW_012114488v1 15605288 0 - 23502949 C e chlSab2.chr13 96677063 0 + 98384682 C e cerAty1.NW_012002071v1 1389302 0 + 3144229 C e nomLeu3.chr3 156296176 0 + 157873769 C e manLeu1.NW_012106474v1 8212425 0 - 10857215 C e macNem1.NW_012011000v1 8358405 0 + 10161646 C e rheMac8.chr4 170326106 270 + 172585720 I e macFas5.chr4 169071930 0 - 170955103 C e panPan2.chr6 171789333 0 + 173848474 C a score=-8785.000000 s hg38.chr6_KB021644v2_alt 99304 10 + 185823 gtgtgtg--------------------tgt s panTro5.chr6 173550892 10 + 175400573 gtgtgtg--------------------tgg i panTro5.chr6 C 0 C 0 s panPan2.chr6 171789333 24 + 173848474 ------gaNNNNNNNNNNNNNNNNNNNNgt i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11471842 10 - 12463322 gtgtgtg--------------------tga i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156296176 10 + 157873769 gtgtgtg--------------------tgt i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169071930 3 - 170955103 ---------------------------TGT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8358405 3 + 10161646 ---------------------------TGT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1389302 5 + 3144229 -----tg--------------------tgt i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96677063 7 + 98384682 ---tgtg--------------------tgt i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8212425 7 - 10857215 ---agtg--------------------tgt i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15605288 5 - 23502949 -----tg--------------------tgt i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169877875 2 + 171630274 ----------------------------GT i calJac3.chr4 C 0 C 0 s canFam3.chr1 56171849 10 + 122678785 GCGTCTG--------------------TAT i canFam3.chr1 C 0 C 0 e otoGar3.GL873575 10946364 2 - 12073884 I e saiBol1.JH378287 1286364 4583 - 2905041 I e aotNan1.NW_018494782v1 1498327 183 - 1813869 I e cebCap1.NW_016107695v1 1245892 207 - 2164891 I e dasNov3.JH569188 564341 0 + 760995 C e rheMac8.chr4 170326106 270 + 172585720 I a score=41148.000000 s hg38.chr6_KB021644v2_alt 99314 10 + 185823 --gtgtgtatgt s panTro5.chr6 173550902 10 + 175400573 --gtgtgtatgt i panTro5.chr6 C 0 C 0 s panPan2.chr6 171789357 10 + 173848474 --gtgtgtatgt i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11471852 10 - 12463322 --gtgtgtatgt i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156296186 10 + 157873769 --gtgtgtgtgt i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169071933 10 - 170955103 --GTGTGTGTGC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8358408 10 + 10161646 --GTGTGTGTGC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1389307 10 + 3144229 --gtgtgtgtgc i cerAty1.NW_012002071v1 C 0 I 2 s chlSab2.chr13 96677070 10 + 98384682 --gtgtgtgtgc i chlSab2.chr13 C 0 I 2 s manLeu1.NW_012106474v1 8212432 10 - 10857215 --gtgtgtgtgc i manLeu1.NW_012106474v1 C 0 I 2 s colAng1.NW_012114488v1 15605293 10 - 23502949 --gtgtgtgtgc i colAng1.NW_012114488v1 C 0 I 6 s calJac3.chr4 169877877 5 + 171630274 --GCGTG----- i calJac3.chr4 C 0 C 0 s otoGar3.GL873575 10946366 8 - 12073884 --GCGGGTGT-- i otoGar3.GL873575 I 2 C 0 s canFam3.chr1 56171859 10 + 122678785 GAATATGTGT-- i canFam3.chr1 C 0 C 0 e saiBol1.JH378287 1286364 4583 - 2905041 I e aotNan1.NW_018494782v1 1498327 183 - 1813869 I e cebCap1.NW_016107695v1 1245892 207 - 2164891 I e dasNov3.JH569188 564341 0 + 760995 C e rheMac8.chr4 170326106 270 + 172585720 I a score=10852.000000 s hg38.chr6_KB021644v2_alt 99324 2 + 185823 gt s panTro5.chr6 173550912 2 + 175400573 gt i panTro5.chr6 C 0 C 0 s panPan2.chr6 171789367 2 + 173848474 gt i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11471862 2 - 12463322 gt i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156296196 2 + 157873769 gt i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170326376 2 + 172585720 GC i rheMac8.chr4 I 270 C 0 s macFas5.chr4 169071943 2 - 170955103 GC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8358418 2 + 10161646 GC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1389319 2 + 3144229 gt i cerAty1.NW_012002071v1 I 2 C 0 s chlSab2.chr13 96677082 2 + 98384682 gt i chlSab2.chr13 I 2 C 0 s manLeu1.NW_012106474v1 8212444 2 - 10857215 gt i manLeu1.NW_012106474v1 I 2 C 0 s colAng1.NW_012114488v1 15605309 2 - 23502949 gt i colAng1.NW_012114488v1 I 6 C 0 s otoGar3.GL873575 10946374 2 - 12073884 GC i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56171869 2 + 122678785 AT i canFam3.chr1 C 0 C 0 e saiBol1.JH378287 1286364 4583 - 2905041 I e aotNan1.NW_018494782v1 1498327 183 - 1813869 I e cebCap1.NW_016107695v1 1245892 207 - 2164891 I e calJac3.chr4 169877882 0 + 171630274 C e dasNov3.JH569188 564341 0 + 760995 C a score=24674.000000 s hg38.chr6_KB021644v2_alt 99326 4 + 185823 gtgc s panTro5.chr6 173550914 4 + 175400573 gtgc i panTro5.chr6 C 0 C 0 s panPan2.chr6 171789369 4 + 173848474 gtgc i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11471864 4 - 12463322 gtgc i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156296198 4 + 157873769 gtgt i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170326378 4 + 172585720 GCGC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169071945 4 - 170955103 GCGC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8358420 4 + 10161646 GCGC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1389321 4 + 3144229 gtgc i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96677084 4 + 98384682 gtgt i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8212446 4 - 10857215 gtgc i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15605311 4 - 23502949 gtgc i colAng1.NW_012114488v1 C 0 C 0 s aotNan1.NW_018494782v1 1498510 4 - 1813869 GTGT i aotNan1.NW_018494782v1 I 183 C 0 s otoGar3.GL873575 10946376 4 - 12073884 ACGC i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56171871 4 + 122678785 ATAT i canFam3.chr1 C 0 C 0 e saiBol1.JH378287 1286364 4583 - 2905041 I e cebCap1.NW_016107695v1 1245892 207 - 2164891 I e calJac3.chr4 169877882 0 + 171630274 C e dasNov3.JH569188 564341 0 + 760995 C a score=62836.000000 s hg38.chr6_KB021644v2_alt 99330 7 + 185823 gtgtgAT s panTro5.chr6 173550918 7 + 175400573 gtgtgAT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171789373 7 + 173848474 gtgtgAT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11471868 7 - 12463322 gtgtgAT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156296202 7 + 157873769 gtgtgAT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170326382 7 + 172585720 GTGTAAT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169071949 7 - 170955103 GTGTAAT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8358424 7 + 10161646 GTGTAAT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1389325 7 + 3144229 gtgtgAT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96677088 7 + 98384682 gtgtgAT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8212450 7 - 10857215 gtgtgAT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15605315 7 - 23502949 gtgtgAT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169877882 2 + 171630274 -----AT i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1246099 7 - 2164891 GTGCGAT i cebCap1.NW_016107695v1 I 207 C 0 s aotNan1.NW_018494782v1 1498514 7 - 1813869 GTGTGAT i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10946380 7 - 12073884 ACATAAT i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56171875 7 + 122678785 ATATGAT i canFam3.chr1 C 0 C 0 e saiBol1.JH378287 1286364 4583 - 2905041 I e dasNov3.JH569188 564341 0 + 760995 C a score=2492254.000000 s hg38.chr6_KB021644v2_alt 99337 295 + 185823 TTTTAAATTTTGGAAAGTCCTACCT-AAAAATAAGTTGCA-TATGCATTGCCAGCTCTTTAAAGCCAATCTG-----------------------TGGATCTAAAACCATCCATTCA--------CTTattccttcac-------------------tgaagaagcactgatttagc----------gcctggaatgaccaggcactcagaacatcaacatgcagacgtg---gtttctgagctcaacatcacagCAGTGTCTTCTCACCAATATTCACAGAACAGCTAATCATTGAGAGGGGACCCAACTTATTCAGCGTtttta----cattt-----------------------------------------------tacattgaca---------------ttacatt------tta---cattagatt s panTro5.chr6 173550925 295 + 175400573 TTTTAAATTTTGGAAAGTCCTACCT-AAAAATAAGTTGCA-TATGCATTGCCAGATCTTTAAAGCCAATCTG-----------------------TGGATCTAAAACCATCCATTCA--------CTTattccttcac-------------------tgaagaagcactgatttagc----------gcctggaatgactgggcactcagaacatcaacatgcagacgtg---gtttctgagctcaacatcacagCAGTGTCTTCTCACCAATATTCACAGAACAGCTAATCATCGAGAGGAGACCCAACTTATTCAGCGTtttta----cattt-----------------------------------------------tacattgaca---------------ttacatt------tta---cattagatt i panTro5.chr6 C 0 I 11 s panPan2.chr6 171789380 295 + 173848474 TTTTAAATTTTGGAAAGTCCTACCT-AAAAATAAGTTGCA-TATGCATTGCCAGCTCTTTAAAGCCAATCTG-----------------------TGGATCTAAAACCATCCATTCA--------CTTattccttcac-------------------tgaagaagcactgatttagc----------gcctggaatgaccgggcactcagaacatcaacatgcagacatg---gtttctgagctcaacatcacagCAGTGTCTTCTCACCAATATTCACAGAACAGCTAATCATCGAGAGGAGACCCAACTTATTCAGCGTtttta----cattt-----------------------------------------------tacattgaca---------------ttacatt------tta---cattagatt i panPan2.chr6 C 0 I 12 s gorGor5.CYUI01015032v1 11471875 295 - 12463322 TTTTAAATTTTGGAAAGTCCTACCT-AAAAATAAGTTGCA-TATGCATTGCCAGCTCTTTAAAGCCAATCTG-----------------------TGGATCTAAAACCATCCATTCA--------CTTattccttcac-------------------tgaagaagcactgatttagc----------gcctggaatgaccgggcactcagaacatcaacatgcagacgtg---gtttctgagctcaacatcacagCAGTGTCTTCTCACCAATATTCACAGAACAGCTAATCATTGAGAGGAGACCCAACTTATTCAGCATtttta----cattt-----------------------------------------------tacattgaca---------------ttacatt------tta---cattagatt i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156296209 294 + 157873769 TTTTAAATTTTGGAAAGTCCTA-CT-AAAAATAAGTTGCA-TATGCATTGCCAGCTCTTTAAAGCCAATCTG-----------------------TGGATCTAAAACAATCCGTTCA--------CTTattccttcac-------------------tgaagaagcactgatttagc----------gcctggaatgaccgggcactcggaacatcaacatacagacatg---gtttctgagctcaacatcacagCAATGTCTTCTCACCAATAGTCACAGAACAGCTAATCATTGAGAGGAGACCCAACTTATTCAGCGTtttta----cattt-----------------------------------------------tacgttgaca---------------ttacatt------tta---cattAGATT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170326389 305 + 172585720 TTTTAAATTTTGTAAAGTCTTACCT-AAAAATAAGTTGCA-TATACATCGCCAGCTCTTTAAAGTCAATCAA-----------------------TGGATCTCAAACAATTCATTCA--------CTTGCTCCTTCAC-------------------TGAAGAAACACTGATTTAGCACCTAGAATGACCTAGAATGACCGGACACTCAGAACATCAACATGCAGACGTG---GTTTCTGAGCTCAACATCACAGCAATGTCTTCTCACCAATATTCACAGAACAGCTAATCATTGAGAGGAGACCCAACCTATTCAGCGTtttta----cattt-----------------------------------------------tacattaaca---------------ttacatt------tta---cattacatt i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169071956 305 - 170955103 TTTTAAATTTTGGAAAGTCTTACCT-AAAAATAAGTTGCA-TATACATCGCCAGCTCTTTAAAGTCAATCAA-----------------------TGGATCTCAAACAATTCATTCA--------CTTGCTCCTTCAC-------------------TGAAGAAACACTGATTTAGCACCTAGAATGACCTAGAATGACCGGACACTCAGAACATCAACATGCAGACGTG---GTTTCTGAGCTCAACATCACAGCAATGTCTTCTCACCAATATTCACAGAACAGCTAATCATTGAGAAGAGACCCAACCTATTCAGCGTtttta----cattt-----------------------------------------------tacattaaca---------------ttacatt------tta---cattacatt i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8358431 295 + 10161646 TTTTAAATTTTGGAAAGTCTTACCT-AAAAATAAGTTGCA-TATACATCGCCAGCTCTTTAAAGTCAATCAA-----------------------TGGATCTCAAACAATTCATTCA--------CTTGCtccttcac-------------------tgaagaaacactgatttagc----------acctagaatgcccggacactcagaacatcaatatgcagacgtg---gtttctgagctcaacatcacagCAATGTCTTCTCACCAATATTCACAGAACAGCTAATCATTGAGAGGAGACCCAACCTATTCAGCGTtttta----cattt-----------------------------------------------tacattaaca---------------ttacatt------tta---cattacatt i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1389332 295 + 3144229 TTTTAAATTTTGGAAAGTCTTACCT-AAAAATAAGTTGCA-TATACATCGCCAGCTCTTTAAAGCCAATCAA-----------------------TGGATCTCAAACAATTCATTCA--------CTTactccttcac-------------------tgaagaagcactgatttagc----------acctagaatgaccagacactcagaacatcaacatgcacacgtg---gtttctgagctcaacatcacagCAATGTCTTCTCACCAATATTCACAGAACAGCTAATCATTGAGAGGAGACCCAACCTATTCAGCGTtttta----cattt-----------------------------------------------tacattaaca---------------ttacatt------tta---cattagatt i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96677095 295 + 98384682 TTTTAAATTTTGGAAAGTCTTACCT-AAAAATAAGTTGCA-TATACATTGCCAGCTCTTTAAAGCCAATCAA-----------------------TGGATCTCAAACAATTCATTCA--------CTTACTCCTTCAC-------------------TGAAGAAGCACTGATTTAGC----------ACCTAGAATGACCGGACACTCAGAACATCAACATGCAGACGTG---GTTTCTGAGCTCAACATCACAGCAATGTCTTCTCACCAATATTCACAGAACAGCTAATCATTGAGAGGAGACCCAACCTATTCGGCGTtttta----cattt-----------------------------------------------tacattaaca---------------ttacatt------tta---cattagatt i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8212457 295 - 10857215 TTTTAAATTTTGGAAAGTCTTACCT-AAAAATAAGTTGCA-TGTACATCGCCAGCTCTTTAAAGCCAATCAA-----------------------TGGATCTCAAACAATTCATTCA--------CTTactccttcac-------------------tgaagaagcactgatttagc----------acctagaatgaccagacactcagaacatcaacatgcagacgtg---gtttctgagctcaacatcacagCAATGTCTTCTCACCAATATTCACAGAACAGCTAATCATTGAGAGGAGACCCAACCTATTCAGCGTtttta----cattt-----------------------------------------------tacattaaca---------------ttacatt------tta---cattagatt i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15605322 295 - 23502949 TTTTAAATTTTGGAAAGTCTTACCT-AAAAATAAGTTGCA-TATACATCGCCAGCTCTTTAAAGCCAATCAA-----------------------TGGATCTCAAACAGTTCATTCA--------CTTAATCTTTCAC-------------------TGGAGAAGCACTGATTTAGC----------ACCTAGAATGACCGGACACTCAGAACATCAACATGCAGATGTG---GTTTCTGAGCTCAACATCACAGCAATGTCTTCTCACCAATATTCACAGAAGAGCTAATCATTGAGAGGAGACCCAATCTATTCAGCGTtttta----cattt-----------------------------------------------tacattaaca---------------ttacatt------tta---cattagatt i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169877884 269 + 171630274 TTTTAAACTTTGGAAAGTCCTACCT-AAAAGTAAGTTGCATTTTGCATTGCCAGCTATTTAAAGCCAACCTA-----------------------TGCATCTGAAACAATTCATTCA--------CTCattcctttat-------------------tgaagacgcgctgatttaac----------tcctggaataaccaggcactgggaacatgaacgtggagacacg---gtttctgggctcagcatcacagca---tcttctcactgat----acagaacagctaa----tcagaGTAGAGTCAGCCTAGTCAGCATTGTCT----CATTT-----------------------------------------------CACACTG----------------------------------------TGGATT i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1246106 277 - 2164891 TTTTAAATTTTGGAAAGTCCTACCT-AAAAGTAAGTTGCATTTTGCATTGCCAGCTATTTAAAGCCAATCTA-----------------------TGCATTTAAAACAATTCATTCA--------CTTattccttcat-------------------tgaagacgcactgatttaac----------tcctggaataaccaggtactgggaacatcaacgtgaagacgtg---gtttctgagctcaaCATCACAGCA---TCTGCTCATTGATATTCACAGAACAGCTAATCATTCATAGTAGACTCAACCTAGTCAGCATTGTCA----CATTT-----------------------------------------------TACACTG----------------------------------------TGGATT i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1498521 277 - 1813869 TTTTAAATTTTGGAAAGTCCTACGT-AAAAGTAAGTTGCATTTTGCATTGCCAGCTATTTAAAACCAATCTA-----------------------TGCATCTAAAACAATTCATTCA--------CTTattccctcat-------------------tgaagacgcactgatttaac----------tcctggaatcaccaggcactgggaatatcaacgtggagacatg---gtttctgagctcgacatcacagCA---TCTTCTCACTGATATTCACAGAGCAGCTAATCATTCAGAGTAGACCCAACCTAGTCAGCATTGTCA----CATTC-----------------------------------------------TACACTG----------------------------------------CGGATC i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10946387 298 - 12073884 TTTTAAATTTTAGAAAGTTTTCCTT-AAAAATAAGTTGTA-CATG-ATTGCTAGCCATTGAAAGGCAAGCTG-----------------------TGCACTT--AACCATCCATTCATTCCTTTTCTCatccactcat-------------------tcaagaaata-----ttaac----------acttacagtggccttgtgctgacaacacacctggggggacagA---GCCTCTGGGCTCAGCCGGGCAGGGATATCTCCTGAGTTACAGCCGCAGAAGAGCC-GTGGTTTAGAGCAGGCCGCAC--AGTCAGGGTTTTCA----CATTT-----------------------------------------------TACATCAATA---------------TTACCCTTCACCATTA---CATTAGATT i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56171882 335 + 122678785 TTTTAAATTTCAGAAAGTCTTACCTAAAAAATAATTTGAT-GGCATCCCACTGGCTATTCCGAAGCAATCTA-----------------------CACATCTGACAGCATTCATTCA----------------TTCAC-------------------TCAGAAAGCATCCCTGCAGT----------GCGTGCCCTAACCACAGGCTGAGGACATAGACCTGGAGGCTTGGGCGTTTCTG--------------------CCCTTTGACGGATGCCCAGGGAAGAGCACATCACCGGGAGCGGGCCCAGTGCACTCCTTGGACTCC----CATCTGGGAGGATGCAGCGGTGGTAACAGCACAAACGGTGGTATCAGCAGGATGCAGTGACAGTGTGAAAACACGGGTGAGGCC------TCAGACCCTTGGAC- i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 564341 311 + 760995 TTTTAAATTTCAACAGGTCTTACCT--GAAATATATTGAA-GGTACACTGCTAGTTTTTAAAAGACAATTTAAAGCAattcattcattcattctttatacctaaaataattcattca--------cttaatttttccttcttttatttattcacttatCAAAAAGTATTAATATCAT----------AGCTAGAAAAACTAGATATTGAAAATCCAAAAATGGAGACATG---GTTTCTGAATTCAATGTTGCTATGCTTTCCTCTGA------TTTATAGAAGAGTAAATCATTGAGAATGGATCTGGCATATTCAGGGTTTTTATAGGCACAT-----------------------------------------------TGGATT----------------------------------------------- i dasNov3.JH569188 C 0 C 0 e saiBol1.JH378287 1286364 4583 - 2905041 I a score=152597.000000 s hg38.chr6_KB021644v2_alt 99632 18 + 185823 cctttccaAGG---GGAGTAC s gorGor5.CYUI01015032v1 11472170 18 - 12463322 cctttccaAGG---GGAGTAC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156296503 18 + 157873769 CCTTTCCAAGG---GGAGTAC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170326694 18 + 172585720 cctttccaAGG---GGAGTAC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169072261 18 - 170955103 cctttccaAGG---GGAGTAC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8358726 18 + 10161646 cctttccaAGG---GGAGTAC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1389627 18 + 3144229 cctttccaAGG---GGAGTAC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96677390 18 + 98384682 cctttccaAGG---GGAGTAC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8212752 18 - 10857215 cctttccaAGG---GGAGTAC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15605617 18 - 23502949 cctttccaAGG---GGAGTAC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169878153 18 + 171630274 CCTTTCCAAGG---GGAGCAC i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1246383 18 - 2164891 CCTTTCCAAGG---GGAGTAC i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1498798 18 - 1813869 CCTTTCCAAGG---GGAGTAC i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10946685 18 - 12073884 CCTTTCCTGAG---AGACTGC i otoGar3.GL873575 C 0 I 1 s canFam3.chr1 56172217 21 + 122678785 CTTCTGTAAGGGACGGTGCAC i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 564652 18 + 760995 ACTTTTTGAGA---AAAATGC i dasNov3.JH569188 C 0 C 0 e saiBol1.JH378287 1286364 4583 - 2905041 I e panPan2.chr6 171789675 12 + 173848474 I e panTro5.chr6 173551220 11 + 175400573 I a score=3600.000000 s hg38.chr6_KB021644v2_alt 99650 1 + 185823 -C s panTro5.chr6 173551231 1 + 175400573 -c i panTro5.chr6 I 11 C 0 s gorGor5.CYUI01015032v1 11472188 1 - 12463322 -C i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156296521 1 + 157873769 -C i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170326712 1 + 172585720 -C i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169072279 1 - 170955103 -C i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8358744 1 + 10161646 -C i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1389645 1 + 3144229 -C i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96677408 1 + 98384682 -C i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8212770 1 - 10857215 -C i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15605635 1 - 23502949 -C i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169878171 1 + 171630274 -C i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1246401 1 - 2164891 -C i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1498816 1 - 1813869 -C i aotNan1.NW_018494782v1 C 0 C 0 s canFam3.chr1 56172238 1 + 122678785 -C i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 564670 1 + 760995 A- i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10946703 1 - 12073884 I e saiBol1.JH378287 1286364 4583 - 2905041 I e panPan2.chr6 171789675 12 + 173848474 I a score=140410.000000 s hg38.chr6_KB021644v2_alt 99651 24 + 185823 ATGTTGA---TAATGATGGAAAAATGT s panTro5.chr6 173551232 24 + 175400573 atgttGA---TAATGATGGAAAAATGT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171789687 24 + 173848474 atgttGA---TAATGATGGAAAAATGT i panPan2.chr6 I 12 C 0 s gorGor5.CYUI01015032v1 11472189 24 - 12463322 ATGTTGA---TAATGATGGAAAAATGT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156296522 24 + 157873769 ATGTTGA---TAATGATGGAAAAATGT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170326713 18 + 172585720 ------A---GGTTGATGGAAAAATGT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169072280 18 - 170955103 ------A---GGTTGATGGAAAAATGT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8358745 18 + 10161646 ------A---GATTGATGGAAAAATGT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1389646 18 + 3144229 ------A---TGTTGATGGAAAAATGT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96677409 18 + 98384682 ------A---TGTTGATGGAAAAATGT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8212771 18 - 10857215 ------A---TGTTGATGGAAAAATGT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15605636 18 - 23502949 ------A---TGTTGATGGAAAAATGT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169878172 24 + 171630274 GTGTTGA---TAATGATGGAAATATGT i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1246402 16 - 2164891 ATGTTGA---TAATGATGG-------- i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1498817 24 - 1813869 GTGTTGA---TAATGATGGAAAGACGT i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10946704 13 - 12073884 ATGTTGA---TAATGG----------- i otoGar3.GL873575 I 1 C 0 s canFam3.chr1 56172239 25 + 122678785 --ATTTAACTGAATGGGAGAGAAATGT i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 564671 24 + 760995 ATGGTAA---TAATGATGGAAAACTAT i dasNov3.JH569188 C 0 I 643 e saiBol1.JH378287 1286364 4583 - 2905041 I a score=92291.000000 s hg38.chr6_KB021644v2_alt 99675 17 + 185823 -----ATCTGAGAAAA---------------------------------------------GTAAGT s panTro5.chr6 173551256 17 + 175400573 -----ATCTGAGAAAT---------------------------------------------GTAAGT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171789711 17 + 173848474 -----ATCTGAGAAAT---------------------------------------------GTAAGT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11472213 17 - 12463322 -----GTCTGAGAAAT---------------------------------------------GTAAGT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156296546 17 + 157873769 -----ATCTGAGAAAT---------------------------------------------GTAAAT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170326731 17 + 172585720 -----ATCTGAGAAAT---------------------------------------------GTAAAC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169072298 17 - 170955103 -----ATCTGAGAAAT---------------------------------------------GTAAAC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8358763 17 + 10161646 -----ATCTGAGAAAT---------------------------------------------GTAAAT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1389664 17 + 3144229 -----ATCTGAGAAAT---------------------------------------------GTAAAA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96677427 17 + 98384682 -----ATCTGAGAAAT---------------------------------------------GCAAAC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8212789 17 - 10857215 -----ATCTGAGAAAT---------------------------------------------GTAAAC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15605654 17 - 23502949 -----ATCTGAGAAAT---------------------------------------------GTAAAC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169878196 17 + 171630274 -----ACCTGAGAAAT---------------------------------------------GTAAAC i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1246418 51 - 2164891 ----------------NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTAAAC i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1498841 16 - 1813869 -----ATCTGAGAAAT---------------------------------------------GT-AAC i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10946717 15 - 12073884 -------CCGAGGAAT---------------------------------------------GTAAAC i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56172264 22 + 122678785 CTACAACCTGCAGCAT---------------------------------------------GTCTGC i canFam3.chr1 C 0 C 0 e saiBol1.JH378287 1286364 4583 - 2905041 I e dasNov3.JH569188 564695 643 + 760995 I a score=994675.000000 s hg38.chr6_KB021644v2_alt 99692 117 + 185823 TGCA-----------------AATCTATGATTTGTTT---CCAGAAGC-TTGTTACCAC---------AG-CGGG------------CAAACTGA-TAACATTAAAGCATGTT---GACCATGCTTCAGATAAAGAATCAAGATCCCAATGAAGCTACACACTA s panTro5.chr6 173551273 117 + 175400573 TGGA-----------------AATCTATGATTTGTTT---CCAGAAGC-TTGTTACCAC---------AG-CGGG------------CAAACTGA-TAACATTAAAGCATGTT---GACCATGCTTCAGATAAAGAATCAAGATCCCAATGAAGCTACACACTA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171789728 117 + 173848474 TGGA-----------------AATCTATGATTTGTTT---CCAGAAGC-TTGTTACCAC---------AG-CGGG------------CAAACTGA-TAACATTAAAGCATGTT---GACCATGCTTCAGATAAAGAATCAAGATCCCAATGAAGCTACACACTA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11472230 117 - 12463322 TGGA-----------------AATCTATGATTTGTTT---CCAGAAGC-TTGTTACCAC---------AG-CGGG------------CAAACTGG-TAACATTAAAGCATGTT---GACCATGATTCAGATAAAGAATCAAGATCCCAATGAAGCTACACACTA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156296563 117 + 157873769 TCGA-----------------AATCTATGATTTGTTT---CCAGAAGC-TTGTTACCAC---------AG-CAGG------------GAACCTGA-TGACATTAAAGCATGTT---GACCATGATTCAGATAAAGAATCAAGATCCCAATGAAGCTACACACTA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170326748 117 + 172585720 TGGA-----------------AATCTGTGATTTATTT---CCAGAAGC-TTGTTACCAC---------AG-CGGG------------CAAAGTGA-AAACATTAAAGCATGTT---GACCATGACTCACGTAAAGAATCAAGATCCCAATGAAGCTACACACTA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169072315 117 - 170955103 TGGA-----------------AATCTGTGATTTATTT---CCAGAAGC-TTGTTACCAC---------AG-CGGG------------CAAAGTGA-AAACATTAAAGCATGTT---GACCATGACTCACGTAAAGAATCAAGATCCCAATGAAGCTACACACTA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8358780 117 + 10161646 TGGA-----------------AATCTGTGATTTATTT---CCAGAAGC-TTGTTACCAC---------AG-CGGG------------CAAAGTGA-AAACATTAAAGCATGTT---GACCATGACTCACGTAAAGAATCAAGATCCCAATGAAGCTACACACTA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1389681 117 + 3144229 TGGA-----------------AATCTGTGATTTATTT---CCAGAAGC-TTGTTACCAC---------AG-CAGG------------CAAACTGA-AAACATTAAAGCATGTT---GACCATGATTCAGATAAAGAATCAAGATTCCAATGAAGCCACACACTA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96677444 117 + 98384682 TGGA-----------------AATCTGTGATTTATTT---CCAGAAGC-TTGTTACCAC---------AG-CAGG------------CAAACTGA-AAACATTAAAGCATGTT---GACCATGATTCAGACAAAGAATCAAGATCCCAATGAAGCCACACACTA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8212806 117 - 10857215 TGGA-----------------AATCTGTGATTTATTT---CCAGAAGC-TTGTTACCAC---------AG-CAGG------------CAAACTGA-AAACATTAAAGCATGTT---GACCATGATTCAGATAAAGAATCAAGATCCCAATGAAGCCACACACTA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15605671 117 - 23502949 TGGA-----------------AATCTGTGATTTATTT---CCAGAAGC-TTGCTACCAC---------AG-CAGG------------CAAACTGA-AAACGTTAAAGCATGTT---GACCATGATTCAGATAAAGAATCAAGATCCCAATGAAGCTACACACTA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169878213 114 + 171630274 TGGA-----------------AATCTATGATTTGTAT---CAAGAAGC-TTGTTACCCC---------AGCCAGG------------CAGAGTGA-TGAAATCAGAGCATGTT---GGCCATGATTCACAC----AATCAAGATTCCAATGAAGACATGCACTA i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1246469 113 - 2164891 TGGA-----------------AATCTGTGATTTGTAT---CAAGAAGC-TTGTTACCCC---------AG-CAGG------------CAAACTGA-TGAAATTAGAGCATGTT---GGCCATGATTCAGAC----AATCAAGATTCCAATGAAACCATGCACTA i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1498857 101 - 1813869 CGGA-----------------AATCTGTGATCTGTAT---CAAGCAGC-TTGTTACCAC---------AG-CAGG------------CAAAGTGA-TGAAA---------------GGCCATGATCCAGAC----AATCAAGAGTCCAGTGAAGCCATGCACTA i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10946732 116 - 12073884 TCCA-----------------AATCTATGTTGTGTATGTATCAGTGGCATCGTCACCAT---------GG-CAGG------------CAAATGGA-TAACATTAAAATCTATT---GCCCATGATTCAGATAAA-----AAGCTTCCAGTGAAGGGCTACGTCA i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56172286 159 + 122678785 AGCAGTGAGTGCCCTCAGGCCAACAGGCGGCACCTGT---AATGAGGT-TTGGCATCACCGACTACGGAG-CTGGGAGTTTTGTTCATAAAGTGGCTGACATCATGACGAGTGACAGATCACAATTTGGATTCATAACCAAGGTTCCAATAAACTTATGTATTA i canFam3.chr1 C 0 I 37 s dasNov3.JH569188 565338 105 + 760995 TGGG-----------------AATCTATTATATGCAT---CAAGAAAT-TT-TTACC-T---------AG-TAGG------------CAAA-----------TAAAGTATGTT---GATGATGATTTTGATAACTAATCAAGTTTCAAATGAGTTTATATAGTA i dasNov3.JH569188 I 643 C 0 e saiBol1.JH378287 1286364 4583 - 2905041 I a score=22920.000000 s hg38.chr6_KB021644v2_alt 99809 2 + 185823 GT s panTro5.chr6 173551390 2 + 175400573 GT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171789845 2 + 173848474 GT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11472347 2 - 12463322 GT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156296680 2 + 157873769 GT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170326865 2 + 172585720 GT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169072432 2 - 170955103 GT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8358897 2 + 10161646 GT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1389798 2 + 3144229 GT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96677561 2 + 98384682 GT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8212923 2 - 10857215 GT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15605788 2 - 23502949 GT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169878327 2 + 171630274 GT i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1246582 2 - 2164891 GT i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1498958 2 - 1813869 GT i aotNan1.NW_018494782v1 C 0 C 0 s dasNov3.JH569188 565443 2 + 760995 GT i dasNov3.JH569188 C 0 I 5413 e otoGar3.GL873575 10946848 0 - 12073884 C e saiBol1.JH378287 1286364 4583 - 2905041 I e canFam3.chr1 56172445 37 + 122678785 I a score=368029.000000 s hg38.chr6_KB021644v2_alt 99811 50 + 185823 TACTATTTTTTCCCTCCATCAAGAAACACTGAGTT---------GTGCTGTGACGGGTC s panTro5.chr6 173551392 48 + 175400573 TACTATTTTTTCCCTCCATCAAGAA--ACTGAGTC---------GTGCTGTGACGGGTC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171789847 48 + 173848474 TACTATTTTTTCCCTCCATCAAGAA--ACTGAGTC---------GTGCTGTGACGGGTC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11472349 50 - 12463322 TACTATTTTTTCCCTCCATCAAGGAACACtgagtc---------atgctgtgacgggtc i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156296682 50 + 157873769 TACTGTTTTTTCCCTCCATCAAAAAACACTGAGTT---------GTGCTGTGACAGGTC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170326867 50 + 172585720 TACTATTTTTTCCCTTCATCAAGAAACACTGATTT---------GTGCTGTGAAGGGTC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169072434 50 - 170955103 TACTATTTTTTCCCTTCATCAAGAAACACTGATTT---------GTGCTGTGAAGGGTC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8358899 50 + 10161646 TACTATTTTTTCCCTTCATCAAGAAACACTGATTT---------GTGCTGTGAAGGGTC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1389800 50 + 3144229 TACTATTTTTTCCCTCCATCAAGAAACACTGATTT---------GTGTTGTGAAGGGTC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96677563 50 + 98384682 TACTATTTTTTCCCTCCATCAAGAAACACTGATTT---------GTGCTGTGAAGGGTC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8212925 50 - 10857215 TACTATTTTTTCCCTCCATCAAGAAACACTGATTT---------GTGCTGTGAAGGGTC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15605790 50 - 23502949 TACTATTTTTTCCCTCTATCAAGAAACACTGATTT---------GTGCTGTGAAGGGTC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169878329 45 + 171630274 TACTA-GGGCTCCCTCCATCCAGA----CTGATTT---------TTCCTGTGGAGGGTC i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1246584 49 - 2164891 TACTA-TGGTTCCCTCCATCGAGAAATTCTGATTT---------GTCCTGTGAAGGGTC i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1498960 49 - 1813869 TACTA-TGGCTCCCTCCATCAAGCAACTCTGACTT---------GTCCTGTGAAGGGTC i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10946848 53 - 12073884 ------CGGTCCCATCCACCGAGAAGCAGTGACTCACTCTGTCGGTGCTGTGACACACC i otoGar3.GL873575 C 0 C 0 e saiBol1.JH378287 1286364 4583 - 2905041 I e dasNov3.JH569188 565445 5413 + 760995 I e canFam3.chr1 56172445 37 + 122678785 I a score=1210785.000000 s hg38.chr6_KB021644v2_alt 99861 159 + 185823 AGGTGTCATGCTTCATGTTTTACATGCTAATTATAACTTTTGTA---AT----GTCATCATCATCACCATTGACTGCTGCTTCTGTATCAGGCAGTCTGTGTACCAAACAGCTAATCTTCCAATAGCATAGTAAGTGGTCTAGTTACCTGTCA----GGGAGGCACCAAG s panTro5.chr6 173551440 159 + 175400573 AGGTGTCATGCTTCATGTTTTACATGCTAATTATAACTTTTGTA---AT----GTCATCATCATCACCATTGACTGCTGCTTCTGTATCAGGCAGTCTGGGTACCAAACAGCTAATCTTCCAATAGCATAGTAAGTGGTCTAGTTATCTGGCA----GGGAGGCACCAAG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171789895 159 + 173848474 AGGTGTCATGCTTCATGTTTTACATGCTAATTATAACTTTTGTA---AT----GTCATCATCATCACCATTGACTGCTGCTTCTGTATCAGGCAGTCTGGGTACCAAACAGCTAATCTTCCAATAGCATAGTAAGTGGTCTAGTTACCTGGCA----GGGAGGCACCAAG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11472399 159 - 12463322 aggtgtcatgcttcatgtTTTACATGCTAATTATAACTTTTATA---AT----ATCATCATCATCACCATTGACTGCTGCTTCTGTATCAGGCAGTCTGTGTACCAAACAGCTAATCTTCCAATAGCATAGTAAGTGGTCTAGTTACCTGGCA----GGGAGGCACCAAA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156296732 159 + 157873769 AGGTGTCATGCTTCATGTTTTACATGCTAATTATAACTTTTATA---AT----ATAATCATCATCACCATTTACTACTTCTTCTGTATCAGGCAGTCTGTGTACCAAACAGCTAATCTTCCGACAGCACAGTAAGTGGTCTAGTTACCTGGCA----GGGCGGCACCAAG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170326917 163 + 172585720 AAGTGTCATGCTTCATGTTTTACATGCTAATTATAACTTATata---atcatcatcatcatcatcaccatTTACTGCTGCTTCTTTATCAGGCAGACTGTGTACCAGACAGGTAATCTTCTAATAGCATAGGAAGTGGTCTAGTTACCTGGCA----GGGCAGCACCAGG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169072484 166 - 170955103 AGGTGTCATGCTTCATGTTTTACATGCTAATTATAACTTATataatcatcatcatcatcatcatcaccatTTACTGCTTCTTCTTTATCAGGCAGACTGTGTACCAGACAGGTAATCTTCTAATAGCATAGGAAGTGGTCTAGTTACCTGGCA----GGGCAGCACCAGG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8358949 166 + 10161646 AGGTGTCATGCTTCATGTTTTACATGCTAATTATAACTTATataatcatcatcatcatcatcatcaccatTTACTGCTTCTTCTTTATCAGGCAGACTGTGTACCAGACAGGTAATCTTCTAATAGCATAGGAAGTGGTCTAGTTACCTGGCA----GGGCAGCACCAGG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1389850 157 + 3144229 AGGTGTCATGCTTCATGTTTTACAGGCTAATTATAACTTATATA---------ATCATCATCATCACCATTTACTGCTTCTTCTTTATCAGGCAGACTGTGTACCAGACAGCTAATCTTCTAATAGCATAGGAAGTGGTCTAGTTACCTGGCA----GGGCAGCACCAGG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96677613 163 + 98384682 AGGTGTCATGCTTCATGTTTTACATGTTAATTATAACTTATATA---ATCATCATCATCACCACCACCATTTACTGCTTCTTCTTTATCAGGCAGACTGTGTACCAGACAGCTAATCTTCTAATAGCATAGGAAGTGGTCTAGTTGCCTGGCA----GGGCAGCACCAGG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8212975 157 - 10857215 AGGTGTCATGCTTCATGTTTTACATGCTAATTATAACTTATATA---ATCATCATCAT------CACCATTTATTGCTTCTTCTTTATCAGGCAGACTGTGTACCAGACAGCTAATCTTCTAATAGCATAGGAAGTGGTCTAGTTACCTGGCA----GGGCAGCACCAGG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15605840 163 - 23502949 AGGTGTCATGCTTCATGTTTTACATGTTAATTATAACTTACGTA---atcatcatcatcatcatcaccatATACTGCTTCTTCTGTATCAGGCAGACTGTGTACCAGACAGCTAATCTTCTAATAGCATAGGAAGTGGTCTAGTTACCTGGCA----GGGCAGCACCAGG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169878374 163 + 171630274 AGGTGTCATGCTTCATGtttattatgttaattattacttatata---att---ataataataGTCATCATTTACTGCTGCTTCTGTATCAGGCAGACTGGGTACCAAACGGCTAATCTTCCAATAGCATAGTAAGTGGCCTAGTTA-CTGGCAAGGCAGGGGGCACCAAG i calJac3.chr4 C 0 I 312 s cebCap1.NW_016107695v1 1246633 161 - 2164891 AGGTGTCATGCTTCCTGTTTTATATGCGAATTCTTACTTATCTA---CTC------ATAATGGTCATCATTTACTGCTTCTTCTGTATCAAGCAGACTGGGTACCAAATGGCTAATCTTCCAACAGCATAGTAAGTGGCCTAGTTACCTGGCAAGGTGGGGGGCACCAAG i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1499009 163 - 1813869 AGGTGTCATGCTTCGTGTTTCATATGAGAATTATTACTTATATA---ATC---AAAATAATGGTCATCATTTCCTGCTTCTTCTGTATCAGGCAGACTGGGTACCAAATGGCTAATCTTCCAATAGCATAGTAAGTGGCCGAGTTA-CTGGCAAGGTGGGGGGCACCAAG i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10946901 98 - 12073884 AATTA----GATCCATGT---ACA-GCTGATTAGATCCGATACC---ATC---GTGGTGGCGGCCGC-----------------GGGTCGGACATTCCGTCCACCAGACTGCTGACCTCCCAGTAG---------------------CTG-------------------- i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56172482 134 + 122678785 AAGCGTTATGCTTCCTGT------------------CTTACGTA---------ACCATGACAGAGACCATGCACTGCCT-TCCTGCACCTGCTAGTCTGTGTACTG---AGCTGATCTTCTAGCGACAT-GCAAGCAATGTCCTCACCTGGCC----GGTGGACACCGAG i canFam3.chr1 I 37 C 0 e saiBol1.JH378287 1286364 4583 - 2905041 I e dasNov3.JH569188 565445 5413 + 760995 I a score=28800.000000 s hg38.chr6_KB021644v2_alt 100020 3 + 185823 CAA s panTro5.chr6 173551599 3 + 175400573 CAA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171790054 3 + 173848474 TAA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11472558 3 - 12463322 CAA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156296891 3 + 157873769 CAA i nomLeu3.chr3 C 0 I 460 s rheMac8.chr4 170327080 3 + 172585720 CAA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169072650 3 - 170955103 CAA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8359115 3 + 10161646 CAA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1390007 3 + 3144229 CAA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96677776 3 + 98384682 CAA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8213132 3 - 10857215 CAA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15606003 3 - 23502949 CAA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169878849 3 + 171630274 CAA i calJac3.chr4 I 312 C 0 s cebCap1.NW_016107695v1 1246794 3 - 2164891 CAA i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1499172 3 - 1813869 CAA i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10946999 3 - 12073884 CAC i otoGar3.GL873575 C 0 C 0 e saiBol1.JH378287 1286364 4583 - 2905041 I e dasNov3.JH569188 565445 5413 + 760995 I e canFam3.chr1 56172616 0 + 122678785 C a score=4314304.000000 s hg38.chr6_KB021644v2_alt 100023 488 + 185823 CAATAGGTTCTTAATAAATACTCACCGAATGAACGATAGAATGG-TCATGCATGGCATGATAAGCAGAAAATAGGAGACTGTAATAGAGTCAAAATTAACTAATAGGAtatattagtcagggttctctggagaaacagaaccaacaggaaggagagagg--gagagagaggggatctgctgtcaggaattggctcatgagattgctggagtta-agtccaaaatctgcagaatagg-ctgcaga-----c----tggag-cctgggga---gagctgatgttgcagcttgtacccgc-ggggagtctggaggcagaagtc---cttcctcaaggaatcaccaacttttttatcttaagtctccaaccacatggatgaggcccacccacgttacgg-aggtcccctgctttgctcaaagtttattgatttaaatgctaatctcatctaaaagataccttcatgccaacgtctagactgggctttgaccc--atagctgggta--------cctggccaagcc s panTro5.chr6 173551602 493 + 175400573 CAATAGGTTCTTAATAAATACTCACCGAATGAACGATAGAATGG-TCATGCATGGCATGATAAGCAGAAAATAGGAGACTGTAATAGAGTCAAAATTAACTAATAGGAtatattagtcagggttctctggagaaacagaaccaacaggaaggagagagggagagagagaggggatctgctgtcaggaattggctcatgagattgctggagtta-agtccaaaatctgcagaatagg-ctgcaga-----c----tggag-cccgggga---gagctgatgttgcagcttgcacccgc-ggggagtctggaggcagaagtccttcttcctcaaggaatcaccaacttttttattttaagtctccaaccacatggatgaggccaacccacgttacgg-aggtcccctgctttgctcaaagtttattgatttaaatgctaatctcatctaaaagataccttcacgccaacgtctagactgggctttgaccc--atagctgggta--------cctggccaagcc i panTro5.chr6 C 0 C 0 s panPan2.chr6 171790057 493 + 173848474 CAATAGGTTCTTAATAAATACTCACCGAATGAACGATAGAATGG-TCATGCATGGCATGATAAGCAGAAAATAGGAGATTGTAATAGAGTCAAAATTAACTAATAGGAtatattagtcagggttctctggagaaacagaaccaacaggaaggagagagggagagagagaggggatctgctgtcaggaattggctcatgagattgctggagtta-agtccaaaatctgcagaatagg-ctgcaga-----c----tggag-cccgggga---gagctgatgttgcagcttgcacccgc-ggggagtctggaggcagaagtccttcttcctcaaggaatcaccaacttttttattttaagtctccaaccacatggatgaggccgacccacgttacgg-aggtcccctgctttgctcaaagtttattgatttaaatgctaatctcatctaaaagataccttcacgccaacgtctagactgggctttgaccc--atagctgggta--------cctggccaagcc i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11472561 494 - 12463322 CAATAGGTTCTTAATAAATACTCACCGAATGAACGATAGAATGGTTCATGCACGGCATGATAAGCAGAAAATAGGAGACTGTAATAGAGTCAAAATTAACTAATAGGAtatattagtcagggttctctggagaaacagaatcaacaggaaggagagagggagagagagaggggatctgctgtcgggaattggctcatgagattgctggagtta-agtccaaaatctgcagaatagg-ctgcaga-----c----tggag-cccgggga---gagctgatgttgcagcttgcacccgc-ggggagtctggaggcagaagtccttcttcctcaaggaatcaccaacttttttatcttaagtctccaaccacatggatgaggcccacccacgttacgg-aggtcccctgctttgctcaaagtttgttgatttaaatgctaatctcatctaaaagataccttcatgccaacgtctagactgggctttgaccc--atagctgggta--------cctggccaagtc i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156297354 493 + 157873769 CAATAGATTCTTAATAAATACTCACCGAATGAACAATAGAATGGTTCAGGCATGGCATGATAAGCAGAAAATAGGAGATTGTAATAGAGTCAAAATTAACTAATAGGAtatattagtcagggttctctggagaaacagaaccaacaggaaggagagagggagagagagaggggatctgctgtcaggaattggctcatgagattgctggagttc-agtccaaaatctgcagaatagg-ctgcaga-----c----tggag-cccgggga---gagctgatgttgcagcttgcacccgc-ggggagtctggaggcataagcc-ttcttcctcaaggaatcatcaacttttttatcttaagtctccaaccacatggatgagggccacccacgtaatgg-aggtcccctgctttgctcaaagtttattgatttaaatgctaatctcatctaaaagataccttcatgccaacgtctagactgggctttgaccc--atagctgggta--------cctggccaagcc i nomLeu3.chr3 I 460 C 0 s rheMac8.chr4 170327083 493 + 172585720 CAACAGATTATTAATAAATACTCACCGAATGAACGACAGAATGGTTCGTGCATGGTGTGAT-AGCAGAAAACAGGAAACTATAATAGAGTCAGAATTAACTAATAGGAtgtattagtcagggttctctggagaaacagaagcaacaggaaggagagagagagagatagtgggaatctgctgccaggaattggctcatgagattggtggagtta-agtccaaaatatgcagaacagg-ctgcaga-----c----tggag-gccgggga---gagctgatgctgcagcttgcacccac-ggggagtctggaggcagaagtccttcttcctcaaggaatcaccgactttttaatcttaagtcttcaaccacatggatgaggcccacccacgttatgg-aggtcccctgcttcgctcaaagtttattgattcaaatgctaatctcatctaaaagataccttaatgccagagtctagactttgcttttaccc--ctaggtgggta--------cctggccaagca i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169072653 493 - 170955103 CAACAGATTATTAATAAATACTCACCGAATGAACGACAGAATGGTTCGTGCATGGTGTGAT-AGCAGAAAACAGGAAACTATAATAGAGTCAGAATTAACTAATAGGAtgtattagtcagggttctctggagaaacagaagcaacaggaaggagagagagagagatagtgggaatctgctgccaggaattggctcatgagattggtggagtta-agtccaaaatctgcagaacagg-ctgcaga-----c----tggag-gccgggga---gagctgatgctgcagcttgcacccac-ggggagtctggaggcagaagtccttcttcctcaaggaatcaccgactttttaatcttaagtcttcaaccacatggatgaggcccacccacgttatgg-aggtcccctgcttcgctcaaagtttattgattcaaatgctaatctcatctaaaagatatcttaatgccagagtctagactttgcttttaccc--ctaggtgggta--------cctggccaagca i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8359118 493 + 10161646 CAACAGATTATTAATAAATACTCACCGAATGAACGACAGAATGGTTCGTGCATGGTGTGAT-AGCAGAAAACAGGAAACTATAATAGAGTCAGAATTAACTAATAGGAtgtattagtcagggttctctggagaaacagaagcaacaggaaggagagagagagagatagtgggaatctgctgccaggaattggctcatgagattggtggagtta-agtccaaaatctgcagaacagg-ctacaga-----c----tggag-gccgggga---gagctgatgctgcagcttgcacccgc-ggggagtctggaggcagaagtccttcttcctcaaggaatcaccgactttttaatcttaagtcttcaaccacatggatgaggcccacccacgttatgg-aggtcccctgcttcgctcaaagtttattgattcaaatgctaatctcatctaaaagatatcttaatgccagagtctagactttgcttttaccc--ctaggtgggta--------cctggccaagca i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1390010 493 + 3144229 CAACAGATTATTAATAAATACTCACTGAATGAATGATAGAATGGTTCGTGCATGGCGTGAT-AGCAGAAAATAGGAAGCTATAATAGAGTTAGAATTAACTAATAGGAtgtattagtcagggttctctggagaaacagaatcaacaggaaggagagagggagagagagtgggaatctgctgtcaggaattggctcatgagattggtggagtta-agtccaaaatctgcagaacagg-ctgcaga-----c----tggag-cccgggga---gagctgatgttgcagcttgcacccac-ggggtgtctggaggcagaagtccttcttcctcaaggaatcaccaactttttagtcttaagtcttcaaccacatggatgaggcccacccacgttatgg-aggtcccctgcttcgctcaaagtttattgattcaaatgctaatctcatctaaaagataccttaatgccaaagtctagacttggcttttaccc--ctaggtgggta--------cctggccaagca i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96677779 493 + 98384682 CAACAGATTATTAATAAATACTCACCGAATGAACGATAGAATGGTTCGTGCATGGTGTGAT-AGCAGAAAATAGGAAACTATAATAGAGTCAGAATTAACTAATAGGAtgtattagtcagggttctctggagaaacagaaccaacaggaaggagagagggagagagagcgggaatctgctgtcaggaattggctcatgagattagtggagtta-agtccaaaatctgcagaacagg-ctgcaga-----c----tggag-cccgggga---gagctgatgttgcagcttgcacccac-ggggagtctggaggcagaagtccttcttcctcaaggaatcaccaactttttaatcttaagtcttcgaccacatggatgaggcccacccatgttatgg-aggtcccctgcttcgctcaaagtttattgattcaaatgctaatctcatctaaaagatatcttaatgccaaagtctggacttcgcttttaccc--ctaggtgggta--------cctggccaagcT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8213135 493 - 10857215 CAACAGATTATTAATAAATACTCACCGAATGAACGACAGAATGGTTCGTGCATGGCGTGAT-AGCAGAAAGTAGGAAACTATAATAGAGTCAGAATTAACTAATAGGAtgtattagtcagggttctctggagaaacagaatcaacaggaaggagagagggagagagagcgggaatctgctgtcaggaattggctcatgagattggtggagtta-agtccaaaatctgcagaacagg-ttgcaga-----c----tggag-cccgggga---gagctgatgttgcagcttgcacccac-ggggtgtctggaggcagaagtccttcttcctcaaggaatcaccaactttttagtcttaagtcttcaaccacatggatgaggcccacccacgttatgg-aggtcccctgcttcgctcaaagtttattgattcaaatgctaatctcatctaaaagataccttaatgccaaagtctagacttcgcttttaccc--ctaggtgggta--------cctggccaagca i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15606006 493 - 23502949 CAATAGATTATTAATAAATACTCACCGAATGAACAATAGAATGGTTCATGCATGGCGTGAT-AGCAGAAAATAGGAAACTATAATAGAGTCAGAATTAACTAATAGGAtgtattagtcagggttctccggagaaacagaagcaacaggaaggagagagggaaagagagagggaatctgctgtcaagaattggcccatgagattggtggagtta-agtccgaaatctgcagaacagg-ctgcaga-----c----tggag-cccgggga---gagctgatgctgcagcttgcacccgc-gaggagtctggaggcagaagtccttcttcctcaaggaatcaccaacgttttaatcttaagtcttcaaccacatggatgaggcccacccatgttatgg-aggtcccctgctttgctcaaagtttattgattcaaatgctaatctcatctaaaagatatcttaatgccaaagtctagacttggcttttaccc--ataggtgggta--------cctggccaagcc i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169878852 490 + 171630274 CAATAGATTCTTAATAAATACTCAGCAGATGAACGACACACTGGTTCATGCACGGCATGAC-AGCAGAAAATGGGAGACTCTAATAGAGTCAGAATTAACTAACAGGGtgtatttgtcagggttctctggagaaacagacccgacaggagaaagatggg--gagagagaggggatctgctgtcaggagttggctcatgaggttgctggggtta-agtccgaaatctgcagaacagg-ctgcgga-----a----tgga--cccaggaa---gagctgaagctgcagcctgcacccggcggggaggctggaggcagaagtcctttttccacgaggaatcaccatctttttcatcttatgtcttcaaccacatggatgtggccca-ccacgttaatg-aggccctccgctttgctcaaattttattcatttaaatgctaatctcatctcaaagataccttgatggcaatatctagactgggctttgaccc--atagctgggtg--------cctggccgcgcc i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1246797 470 - 2164891 CAATAGATTCTTAATAAATACTCAGCAGA-GAATGATAGACTGGTTCATGCATGGCATGAC-AGCAGAAAATGGGAGGCTGTAATAGAGTCAGAATTAACTAATAGGGAgtattagtcagggttctccggagaaacagacccaacaggaagaagatggg--gagagagagaagatctgctgtcaagagttggctcatgaggttgctggcgtta-agtccaaaatctgcagaacagg-ctgcaga-----t----tgga--cccaggga---gagctgaagctgccgcttacacccgg-ggggagcctggaggcagaagtccttcttcctcaaggaatcaccatctttttcatcttacgtcttcaactacatgg-------------------atg-aggccctccgctttgatcaaagtttattcatttaaatgctaatctcatctaaaagataccttgacggcaacgtctagactaggctttgaccc--atagctgggtg--------cctggccgagcc i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1499175 495 - 1813869 CAATGGGTTCTTAATAAATACTCAGCAGATGAATGATAGACTGGTTCGTGCGTGGCACGAC-AGCAGAAAATGGGAGACTGTAATAGAGTCAGAATTAACTAACAGGGtgtattagtcggggttctctggagaaacagacccaacaggaaggagatggg--gagagggcggggatctgctgtcaagagttggctcatgaggttgctggggtta-agtccaaaatccgcagaacagg-ccacagactgttc----tgaa--cccaggga---gagctgaagctgcagcttgcacccgg-ggggagcctggaggcagaagtccttcttccgcaaggaatcaccatccttttcatcttacgtcttcaaccacatggatgtggcccacccatgttaagg-aggccttctgctttgctcaaagtttattcatttaaatgctaatctcatctaaaagataccttgatggcaacgtctagactgggctttgaccc--atagctgggtg--------cctggccaagcc i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10947002 444 - 12073884 TAACAACCTCTTAACAAATTCTCCTGGAATGAG-GCTCGAATGGCCCATGTGGGGCCTGAA-AGCAGCAACCAGGTGATGGTAAC--AGTTAAAATTCCCTGATGTCCTGTGGCAGGCCACGTTCTCCAGAAACACAGCACCCACAGGAGGCAGGGAGAGAAAG-----GGGGATCC-CTGCTAAG-----------GGGACAGTTGGGGCCATAGTGCACAGT-GGCAG-GTGGG-CAGCAGA-----CTGCGTGGAG-GCCGGGAGCCTGAGCTGCTGCACCCCCCCACCCCCAC-----------------------CGCCCTGCTCCAGGG--------CCGTCTCCACTTCAGGCTTCAGCAGCACGGGCAAGGCCGCAGCA-GCTAAGG-AAgcaatctgcatcacttgaagttcaatgacttaaatgctagtccta--taaaaaataccttccagcca-catctagact-ggcgttcaacc--acagtgctgcc--------cccacccagcca i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56172616 466 + 122678785 TAATCGGTTCCTAGTGGATGCCTCGTGAATGAATGATTGGAGGGCCTAGGAGTGGGTTGGT-AGCAGCAA-CAGACCACCGTAATGTGGTCAAACCTAAATTAAATGGtgtatcggccgggattctccagagaaacaaaaccaataggagggacagagggagggagagag---atggatgataaggatttggctc-------cactatcgtgg-gg------acccacagggcagacctgcaag-----c----tgcagacccaggag---gagctgaggcca----------tcag-gaggag------------aattctctcttcttgggggacctctgtctttttctctttagtacttcaactgattggatgtggcccaaccacattttggtgggtcatctgttttcctcaaattctaccaattaaaatattaatcatatctaaaaaatagcttcatagaaatgtctagact-ggtgtctgcccgaatatttgagcaccctgcaccctggcccagcc i canFam3.chr1 C 0 I 6728 e saiBol1.JH378287 1286364 4583 - 2905041 I e dasNov3.JH569188 565445 5413 + 760995 I a score=481653.000000 s hg38.chr6_KB021644v2_alt 100511 56 + 185823 CCTGGTTACCTGTGCAAGTAACCAACACAAATCGTGTACTAAGTACTGTGCACACC s panTro5.chr6 173552095 56 + 175400573 cctggttacctgtgcaagtaaccaacacaAATCGTGTACTAAGTACTGTGCACACC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171790550 56 + 173848474 CCTGGTTACCTGTGCAAGTAACCAACACAAATCGTGTACTAAGTACTGTGCACACC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11473055 56 - 12463322 cctggttacctgtgcaagtaaccaacacaAATCGTGTACTAAGTACTGTGCACACC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156297847 56 + 157873769 CCTGGTTACCTGTGCAAGTAACCAACACAAATCGTGTACACAGTACTGTGTACACC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170327576 56 + 172585720 cccggttacttgtgcaagtaaccaacacaAATCGTGTACACATTACTGTGCACGCC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169073146 56 - 170955103 cccggttacttgtgcaagtaaccaacacaAATCGTGTACACATTACTGTGCACGCC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8359611 56 + 10161646 cccggttacttgtgcaagtaaccaacacaAATCGTGTACACATTACTGTGCACGCC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1390503 56 + 3144229 cctggttacctgtgcaagtaaccaacacaAATCGTGTACACTTTACTGTGCACACT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96678272 55 + 98384682 CCTGGTTACCTGTG-AAGTAACCAACACAAATCGTGTACACATTACTGTGCACGCC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8213628 56 - 10857215 cctggttacctgtgcaagtaaccaacacaAATCGTGTACACTTTACTGTGCACACT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15606499 56 - 23502949 cctggttacctatgcaagcaaccaacacaAATCATGTACACATTACTGTGCACACT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169879342 56 + 171630274 CCTGGTTACCTGTGCATGTAACCAGCACAAATCGTGTACACACCACTGTGTACACC i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1247267 56 - 2164891 CCTGGTTACCTGTGCATGTAACCAGCACAAATCGTGTACATACCACTGTGCACACC i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1499670 56 - 1813869 CCTGGTTACCTGTGCATGTAACCAGCACAAATCGTGTACATACCACTGTGCACACC i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10947446 53 - 12073884 cgttgccacacaC---AGCAGCCATCCTGAATGGCCCACATGCTGCTGTGCACACC i otoGar3.GL873575 C 0 I 39 e saiBol1.JH378287 1286364 4583 - 2905041 I e dasNov3.JH569188 565445 5413 + 760995 I e canFam3.chr1 56173082 6728 + 122678785 I a score=120285.000000 s hg38.chr6_KB021644v2_alt 100567 13 + 185823 -GCAAGCTTACAAT s panTro5.chr6 173552151 13 + 175400573 -GCAAGCTTACAAT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171790606 13 + 173848474 -ACAAGCTTACAAT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11473111 13 - 12463322 -GCAAGCTTACAAT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156297903 13 + 157873769 -ACAAGCTTACAAT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170327632 13 + 172585720 -GCAAGCTTACAAT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169073202 13 - 170955103 -GCAAGCTTACAAT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8359667 13 + 10161646 -GCAAGCTTACAAT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1390559 13 + 3144229 -GCAAGCTTACAAT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96678327 13 + 98384682 -GCAAGCTTACAAT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8213684 13 - 10857215 -GCAAGCTTACAAT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15606555 13 - 23502949 -GCAAGCTTACAAT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169879398 14 + 171630274 TGCAAGCTTACAAT i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1247323 14 - 2164891 CACAAGCTTACAAT i cebCap1.NW_016107695v1 C 0 I 93 s aotNan1.NW_018494782v1 1499726 14 - 1813869 CGCAAGCGTACAAT i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10947499 39 - 12073884 I e saiBol1.JH378287 1286364 4583 - 2905041 I e dasNov3.JH569188 565445 5413 + 760995 I e canFam3.chr1 56173082 6728 + 122678785 I a score=5947.000000 s hg38.chr6_KB021644v2_alt 100580 1 + 185823 C s panTro5.chr6 173552164 1 + 175400573 C i panTro5.chr6 C 0 C 0 s panPan2.chr6 171790619 1 + 173848474 C i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11473124 1 - 12463322 C i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156297916 1 + 157873769 C i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170327645 1 + 172585720 C i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169073215 1 - 170955103 C i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8359680 1 + 10161646 C i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1390572 1 + 3144229 C i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96678340 1 + 98384682 C i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8213697 1 - 10857215 T i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15606568 1 - 23502949 T i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169879412 1 + 171630274 C i calJac3.chr4 C 0 C 0 s aotNan1.NW_018494782v1 1499740 1 - 1813869 C i aotNan1.NW_018494782v1 C 0 I 92 e otoGar3.GL873575 10947499 39 - 12073884 I e saiBol1.JH378287 1286364 4583 - 2905041 I e cebCap1.NW_016107695v1 1247337 93 - 2164891 I e dasNov3.JH569188 565445 5413 + 760995 I e canFam3.chr1 56173082 6728 + 122678785 I a score=449998.000000 s hg38.chr6_KB021644v2_alt 100581 68 + 185823 AGA--------------------------CCTGGCATCACAGCGGGTCTTTGTATGGTGACAGCACAGGCCTAAGGGAAAGGGGATTTACACCA s panTro5.chr6 173552165 68 + 175400573 AGA--------------------------CCCGGCATCACAGCGGGTCTTTGTATGGTGACAGCATAGGCTTAAGGGAAAGGGGATTTACACCA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171790620 68 + 173848474 AGA--------------------------CCCGGCATCACAGCGGGTCTTTGTATGGTGACAGCATAGGCTTAAGGGAAAGGGGATTTACACCA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11473125 68 - 12463322 AGA--------------------------CCTGGCATCACAGCGGGTCTTTGTATGGTGACAGCACAGGCTTAAGGGAAAGGGGATTTACACCA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156297917 94 + 157873769 CGATAGGTCCTGCCTCCCAGGGTGAAAAGCCTGGCATTACAGCGGGTCTTTGTATGGTGACAGCATAGGCTCAAGGGAAAGGGGATTTACTCCA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170327646 93 + 172585720 GGATAGGTCCT-CTTCCCAGGGTGAAAAGCCTGGCATCACAGCAGGACTTTGTATGGTGACAGCATAGGCTTAAGGGAAAGGGGCTTTACTCTT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169073216 93 - 170955103 GGATAGGTCCT-CTTCCCAGGGTGAAAAGCCTGGCATCACAGCAGAACTTTGTATGGTGACAGCATAGGCTTAAGGGAAAGGGGGTTTACTCTT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8359681 93 + 10161646 GGATAGGTCCT-CTTCCCAGGGTGAAAAGCCTGGCATCACAGCAGGACTTTGTATGGTGACAGCATAGGCTTAAGGGAAAGGGGGTTTACTCTT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1390573 94 + 3144229 GGATAGGTCCTGCTTCCCAGGGTGAAAAGCCTGGCATCACAGCGGGACTTTGTACGGTGACAGCATAGGCTTAAGGGAAAGGGGGTTTACTCTT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96678341 94 + 98384682 AGATAGGTCCTGCTTCCCAGGGTGAAAAGCCTGGCATCACAGCGGGACTTTGTACAGTGACAGCATAGGCTTAAGGGAAAGGGGGTTTACTCTT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8213698 94 - 10857215 GGATAGGTCCTGCTCCCCAGGGTGAAAAGCCTGACATCACAGCGGGACTTTGTACGGTGACAGCATAGGCTTAAGGGAAAGGGGGTTTACTCTT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15606569 94 - 23502949 GGATAGGCCCTGCCTCCCAGGGTGAAAAGCCTGGCAGCACAGTGGGGCTTTGTACAGTGACAGCATAGGCTTAAGGGAAAGGGGGTTTACTCTT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169879413 94 + 171630274 GGATAGGTCCTGCTTCCCAGGGCGAAAAGCCTGGCATCACAGCAGGGCTGTGTACAGTGACAGCATGGGCTTGGGGAAAAGGGGGTTTACTCTG i calJac3.chr4 C 0 C 0 e otoGar3.GL873575 10947499 39 - 12073884 I e saiBol1.JH378287 1286364 4583 - 2905041 I e aotNan1.NW_018494782v1 1499741 92 - 1813869 I e cebCap1.NW_016107695v1 1247337 93 - 2164891 I e dasNov3.JH569188 565445 5413 + 760995 I e canFam3.chr1 56173082 6728 + 122678785 I a score=331215.000000 s hg38.chr6_KB021644v2_alt 100649 37 + 185823 CATGGTTTATGTAGGGTGCAGGCCAAGCAAGTTCACA s panTro5.chr6 173552233 37 + 175400573 CATGGTTTATGTAGGGTGCAGGCCAAGCAAGTTCACG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171790688 37 + 173848474 CATGGTTTATGTAGGGTGCAGGCCAAGCAAGTTCACG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11473193 37 - 12463322 CATGGTTTATGTAGGGTGCAGGCCAAGCAAGTTCACA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156298011 37 + 157873769 CATGGTTTGTGTAGGGTGCAGGCCAAGCAAGTTCACA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170327739 37 + 172585720 CATGGTTTGTGTAGGATGCAGGCCAAGCACGTTCACA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169073309 37 - 170955103 CATGGTTTGTGTAGGATGCAGGCCAAGCACGTTCACA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8359774 37 + 10161646 CATGGTTTGTGTAGGATGCAGGCCAAGCACGTTCACA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1390667 37 + 3144229 CATGGTTTGTGTAGGATGCAGGCCAAGCACGTTCACA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96678435 37 + 98384682 CATGGTTTGTGTAGGATGCAGGCCAAGCAAGTTCACA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8213792 37 - 10857215 CATGGTTTGTGTAGGATGCAAGCCAAGCAAGTTCACA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15606663 37 - 23502949 CATGGTTTGTATAGGATGCAGGCCAAGCAAGTTCACA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169879507 37 + 171630274 CATGGTTTGTGCAGGCTGCAGGCCAAGCAGGTTCACA i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1247430 37 - 2164891 CATGGTTTGTGCAGGGTGCAGGCCAAGCAGGTTCACA i cebCap1.NW_016107695v1 I 93 I 6 s aotNan1.NW_018494782v1 1499833 37 - 1813869 CATGGTTTGTACAGGGTGCAGGCCAAGCAGGTTCACA i aotNan1.NW_018494782v1 I 92 I 191 e otoGar3.GL873575 10947499 39 - 12073884 I e saiBol1.JH378287 1286364 4583 - 2905041 I e dasNov3.JH569188 565445 5413 + 760995 I e canFam3.chr1 56173082 6728 + 122678785 I a score=41364.000000 s hg38.chr6_KB021644v2_alt 100686 6 + 185823 AGAGGC s panTro5.chr6 173552270 6 + 175400573 AGAGGC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171790725 6 + 173848474 AGAGGC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11473230 6 - 12463322 AGAGGC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156298048 6 + 157873769 AGAGGC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170327776 6 + 172585720 AGAGGC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169073346 6 - 170955103 AGAGGC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8359811 6 + 10161646 AGAGGC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1390704 6 + 3144229 AGAGGC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96678472 6 + 98384682 AGAGGC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8213829 6 - 10857215 AGAGGC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15606700 6 - 23502949 AGAGGC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169879544 6 + 171630274 GGTGGC i calJac3.chr4 C 0 C 0 e otoGar3.GL873575 10947499 39 - 12073884 I e saiBol1.JH378287 1286364 4583 - 2905041 I e aotNan1.NW_018494782v1 1499870 191 - 1813869 I e cebCap1.NW_016107695v1 1247467 6 - 2164891 I e dasNov3.JH569188 565445 5413 + 760995 I e canFam3.chr1 56173082 6728 + 122678785 I a score=59540.000000 s hg38.chr6_KB021644v2_alt 100692 7 + 185823 TGGTGCA s panTro5.chr6 173552276 7 + 175400573 TGGTGCA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171790731 7 + 173848474 TGGTGCA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11473236 7 - 12463322 TGGTGCA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156298054 7 + 157873769 TGGTGCA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170327782 7 + 172585720 TGGTGCA i rheMac8.chr4 C 0 I 1 s macFas5.chr4 169073352 7 - 170955103 TGGTGCA i macFas5.chr4 C 0 I 3 s macNem1.NW_012011000v1 8359817 7 + 10161646 TGGTGCA i macNem1.NW_012011000v1 C 0 I 1 s cerAty1.NW_012002071v1 1390710 7 + 3144229 TGGTGCA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96678478 7 + 98384682 TGGTGCA i chlSab2.chr13 C 0 I 1 s manLeu1.NW_012106474v1 8213835 7 - 10857215 TGGTGCA i manLeu1.NW_012106474v1 C 0 I 1 s colAng1.NW_012114488v1 15606706 7 - 23502949 TGGTGCA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169879550 7 + 171630274 TGGTACA i calJac3.chr4 C 0 C 0 s aotNan1.NW_018494782v1 1500061 7 - 1813869 TGGTGCA i aotNan1.NW_018494782v1 I 191 C 0 e otoGar3.GL873575 10947499 39 - 12073884 I e saiBol1.JH378287 1286364 4583 - 2905041 I e cebCap1.NW_016107695v1 1247467 6 - 2164891 I e dasNov3.JH569188 565445 5413 + 760995 I e canFam3.chr1 56173082 6728 + 122678785 I a score=-16692.000000 s hg38.chr6_KB021644v2_alt 100699 3 + 185823 GG--C s panTro5.chr6 173552283 3 + 175400573 GG--C i panTro5.chr6 C 0 C 0 s panPan2.chr6 171790738 3 + 173848474 GG--C i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11473243 3 - 12463322 GG--C i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156298061 3 + 157873769 GG--C i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170327790 2 + 172585720 GG--- i rheMac8.chr4 I 1 C 0 s macNem1.NW_012011000v1 8359825 2 + 10161646 GG--- i macNem1.NW_012011000v1 I 1 C 0 s cerAty1.NW_012002071v1 1390717 3 + 3144229 GGC-- i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96678486 2 + 98384682 GA--- i chlSab2.chr13 I 1 C 0 s manLeu1.NW_012106474v1 8213843 2 - 10857215 GG--- i manLeu1.NW_012106474v1 I 1 C 0 s colAng1.NW_012114488v1 15606713 3 - 23502949 GG-C- i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169879557 2 + 171630274 GG--- i calJac3.chr4 C 0 C 0 s aotNan1.NW_018494782v1 1500068 3 - 1813869 GGC-- i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10947499 39 - 12073884 I e saiBol1.JH378287 1286364 4583 - 2905041 I e cebCap1.NW_016107695v1 1247467 6 - 2164891 I e dasNov3.JH569188 565445 5413 + 760995 I e canFam3.chr1 56173082 6728 + 122678785 I e macFas5.chr4 169073359 3 - 170955103 I a score=7397.000000 s hg38.chr6_KB021644v2_alt 100702 1 + 185823 C s panTro5.chr6 173552286 1 + 175400573 C i panTro5.chr6 C 0 C 0 s panPan2.chr6 171790741 1 + 173848474 C i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11473246 1 - 12463322 C i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156298064 1 + 157873769 C i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170327792 1 + 172585720 C i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169073362 1 - 170955103 C i macFas5.chr4 I 3 C 0 s macNem1.NW_012011000v1 8359827 1 + 10161646 C i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1390720 1 + 3144229 C i cerAty1.NW_012002071v1 C 0 I 52 s chlSab2.chr13 96678488 1 + 98384682 T i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8213845 1 - 10857215 C i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15606716 1 - 23502949 C i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169879559 1 + 171630274 C i calJac3.chr4 C 0 C 0 s aotNan1.NW_018494782v1 1500071 1 - 1813869 C i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10947499 39 - 12073884 I e saiBol1.JH378287 1286364 4583 - 2905041 I e cebCap1.NW_016107695v1 1247467 6 - 2164891 I e dasNov3.JH569188 565445 5413 + 760995 I e canFam3.chr1 56173082 6728 + 122678785 I a score=182774.000000 s hg38.chr6_KB021644v2_alt 100703 31 + 185823 CCTCGACTGAGCACTTAGCTTGGTGCAGGCC s panTro5.chr6 173552287 31 + 175400573 CCTCGACTGAGCACTTAGCTTGGTGCAGGCC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171790742 31 + 173848474 CCTCGACTGAGCACTTAGCTTGGTGCAGGCC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11473247 31 - 12463322 CCTCGACTGAGCACTTAGCTTGGTGCAGGCC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156298065 31 + 157873769 CCTCGGCTGAGAACCTAGCTTGGTGCAGACC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170327793 31 + 172585720 CCTCGGCTGAGCACTGAGCTCGGTTCAGGCC i rheMac8.chr4 C 0 I 143 s macFas5.chr4 169073363 31 - 170955103 CCTCGGCTGAGCACTGAGCTCGGTGCAGGCC i macFas5.chr4 C 0 I 182 s macNem1.NW_012011000v1 8359828 31 + 10161646 CCTCGGCTGAGCACTGAGCTCGGTTCAGGCC i macNem1.NW_012011000v1 C 0 I 53 s chlSab2.chr13 96678489 31 + 98384682 CCTTGGCTGAGCACTTGGCTTGGTGCAGGCC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8213846 31 - 10857215 CCTTGGCTGAGCGCTTAGCTTGGTGCAGGCC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15606717 31 - 23502949 CCTTGGCTGAGCACTTGGCTTGGTGCAGTCC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169879560 30 + 171630274 CCTTGGCTGAGCACTTACATTGGTGCAGG-C i calJac3.chr4 C 0 C 0 s aotNan1.NW_018494782v1 1500072 31 - 1813869 CCTTGGCCGAGTACTTAGCTTGGTGCAGGCC i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10947499 39 - 12073884 I e saiBol1.JH378287 1286364 4583 - 2905041 I e cebCap1.NW_016107695v1 1247467 6 - 2164891 I e dasNov3.JH569188 565445 5413 + 760995 I e canFam3.chr1 56173082 6728 + 122678785 I e cerAty1.NW_012002071v1 1390721 52 + 3144229 I a score=96424.000000 s hg38.chr6_KB021644v2_alt 100734 39 + 185823 CCTCGGCTGAGTACTTAG-------------------------------------------------------------------CTTTGTGCAGGCCCATTGGGT s panTro5.chr6 173552318 101 + 175400573 CCTCGGCTGAGTACTTAGCTTGGTGCAGGCCCCTTGGCTGAGCACTGAGCTTGG-----TGCAGGCCCCTTGGGTGAGTACTTAACTTTGTGCAGGCCCATTGGGT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171790773 101 + 173848474 CCTCGGCTGAGTACTTAGCTTGGTGCAGGCCCCTTGGCTGAGCACTGA-----GCTTGGTGCAGGCCCCTTGGGTGAGTACTTAACTTTGTGCAGGCCCATTGGGT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11473278 39 - 12463322 CCTTGGCTGAGTACTTAA-------------------------------------------------------------------CTTTGTGCAGGCCCATTGGGT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156298096 39 + 157873769 CCTCGGCTGAGCACTTAA-------------------------------------------------------------------CTTGGTGCAGGCCCATTGGGT i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169073576 39 - 170955103 CGTTGGGTGAGCACTGGG-------------------------------------------------------------------CTCGGTGCACGGCCGTTGGGT i macFas5.chr4 I 182 T 221 s chlSab2.chr13 96678520 39 + 98384682 TGTTGGGTGAACACTGAG-------------------------------------------------------------------GTTGGTGCAGGCCCGTTGGGT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8213877 39 - 10857215 CATTGGGTGAGCACTGAG-------------------------------------------------------------------GCTGGTGCAGGCCTGTTGGGT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15606748 39 - 23502949 CGTTGGGTGAGCACTGAG-------------------------------------------------------------------CTTGGTGCAGGCCCCTTGGTT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169879590 39 + 171630274 CCTTGGCTGAGTACTTAG-------------------------------------------------------------------CTTGGTGCAGGCCTGTTGACT i calJac3.chr4 C 0 C 0 s aotNan1.NW_018494782v1 1500103 39 - 1813869 CCTTGGCCGAGTACTTAG-------------------------------------------------------------------CTTGGTGCAGGCCTGTTGACT i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10947499 39 - 12073884 I e saiBol1.JH378287 1286364 4583 - 2905041 I e cebCap1.NW_016107695v1 1247467 6 - 2164891 I e dasNov3.JH569188 565445 5413 + 760995 I e canFam3.chr1 56173082 6728 + 122678785 I e cerAty1.NW_012002071v1 1390721 52 + 3144229 I e macNem1.NW_012011000v1 8359859 53 + 10161646 I e rheMac8.chr4 170327824 143 + 172585720 I a score=27162.000000 s hg38.chr6_KB021644v2_alt 100773 8 + 185823 GAGCACTG s panTro5.chr6 173552419 8 + 175400573 GAGCACTG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171790874 8 + 173848474 GAGCACTG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11473317 8 - 12463322 GAGCACTG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156298135 8 + 157873769 GAGCACTG i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169073394 8 - 170955103 AAGCACAT i macFas5.chr4 T 221 I 7 s chlSab2.chr13 96678559 8 + 98384682 GAACACTG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8213916 8 - 10857215 GAGCACTG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15606787 8 - 23502949 GAGCATTG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169879629 8 + 171630274 GAGTACGT i calJac3.chr4 C 0 C 0 s aotNan1.NW_018494782v1 1500142 8 - 1813869 GAGTACTT i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10947499 39 - 12073884 I e saiBol1.JH378287 1286364 4583 - 2905041 I e cebCap1.NW_016107695v1 1247467 6 - 2164891 I e dasNov3.JH569188 565445 5413 + 760995 I e canFam3.chr1 56173082 6728 + 122678785 I e cerAty1.NW_012002071v1 1390721 52 + 3144229 I e macNem1.NW_012011000v1 8359859 53 + 10161646 I e rheMac8.chr4 170327824 143 + 172585720 I a score=81968.000000 s hg38.chr6_KB021644v2_alt 100781 39 + 185823 AGCTTAGTGCAGGC-----------------------------CCCTCGGCTGAGTACCTAGCTTGGT s panTro5.chr6 173552427 39 + 175400573 AGCTTAGTGCAGGC-----------------------------CCCTCGGCTGAGTACTTAGCTTGGT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171790882 38 + 173848474 AGCTTAGTGCAGG------------------------------CCCTCGGCTGAGTACTTAGCTTGGT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11473325 68 - 12463322 AGCTTAGTGCAGGCCCACGGCTGAGTACCTAGCTTGGTGCAGGCCCTCGGCTGAGTACTTAGCTTGGT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156298143 39 + 157873769 AGCTTGGTGCAGGC-----------------------------CCCTCAGCTGAGCATTGAGCTTGGT i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169073409 38 - 170955103 AGGCTGGTGCAGGC-----------------------------CAAGCACGTTCACAAGAGGCT-GGT i macFas5.chr4 I 7 C 0 s manLeu1.NW_012106474v1 8213924 39 - 10857215 AGGTTGGTGCAGGC-----------------------------CCGTTGGGTTAACACTTGGCTCGGT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15606795 39 - 23502949 AGCTTGGTGCAGGC-----------------------------CCATTGGGTGAGCACTGAGCTTGGT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169879637 39 + 171630274 AGCTTAATGCAGGT-----------------------------CTGCTGACTGAGTACTTAGCTTAAT i calJac3.chr4 C 0 C 0 s aotNan1.NW_018494782v1 1500150 39 - 1813869 AGCTTAATGCAGGT-----------------------------CTGTTGACTGAGTACTTAGCTTGCT i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10947499 39 - 12073884 I e saiBol1.JH378287 1286364 4583 - 2905041 I e cebCap1.NW_016107695v1 1247467 6 - 2164891 I e dasNov3.JH569188 565445 5413 + 760995 I e canFam3.chr1 56173082 6728 + 122678785 I e chlSab2.chr13 96678567 0 + 98384682 C e cerAty1.NW_012002071v1 1390721 52 + 3144229 I e macNem1.NW_012011000v1 8359859 53 + 10161646 I e rheMac8.chr4 170327824 143 + 172585720 I a score=27227.000000 s hg38.chr6_KB021644v2_alt 100820 7 + 185823 GCAGGCC s panTro5.chr6 173552466 7 + 175400573 GCAGGCC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171790920 6 + 173848474 GCAGG-C i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11473393 7 - 12463322 GCAGGCC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156298182 7 + 157873769 GCAGGCC i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169073447 7 - 170955103 GCAGGGC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8359912 7 + 10161646 GCAGGGC i macNem1.NW_012011000v1 I 53 C 0 s manLeu1.NW_012106474v1 8213963 7 - 10857215 GCAGGGC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15606834 7 - 23502949 GCAGGCC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169879676 7 + 171630274 GCAGGTC i calJac3.chr4 C 0 C 0 s aotNan1.NW_018494782v1 1500189 7 - 1813869 GCAGGCC i aotNan1.NW_018494782v1 C 0 I 41 e otoGar3.GL873575 10947499 39 - 12073884 I e saiBol1.JH378287 1286364 4583 - 2905041 I e cebCap1.NW_016107695v1 1247467 6 - 2164891 I e dasNov3.JH569188 565445 5413 + 760995 I e canFam3.chr1 56173082 6728 + 122678785 I e chlSab2.chr13 96678567 0 + 98384682 C e cerAty1.NW_012002071v1 1390721 52 + 3144229 I e rheMac8.chr4 170327824 143 + 172585720 I a score=78404.000000 s hg38.chr6_KB021644v2_alt 100827 31 + 185823 CCTCAGCTGAGCAC-------TGAGCTTGGTGCAGGCC s panTro5.chr6 173552473 31 + 175400573 CCTCAGCTGAGCAC-------TGAGCTTGGTGAAGGCC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171790926 31 + 173848474 CCTCAGCTGAGCAC-------TGAGCTTGGTGAAGGCC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11473400 31 - 12463322 CCTCAGCTGAGCAC-------TGAGCTTGGTGAAGGCC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156298189 31 + 157873769 CCTCGGCTGAGCAC-------TGAGCTTGATGCAGGAC i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169073454 31 - 170955103 C-------AAGCACATTCACAAGAGGCTGGTGCAGGCC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8359919 31 + 10161646 CCTCGGCTGAGCAC-------TGAGCTCGGTTCAGGCC i macNem1.NW_012011000v1 C 0 I 37 s manLeu1.NW_012106474v1 8213970 31 - 10857215 CGTTGGGTGAGCAC-------TGAGGTCAGTGCAGGGC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15606841 31 - 23502949 CCTTGGCTGAGCAC-------TGAGCTTGGTGCAGGCC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169879683 31 + 171630274 TCCTGACTGAGTAC-------TTAGCTTAATGCAGGTC i calJac3.chr4 C 0 C 0 e otoGar3.GL873575 10947499 39 - 12073884 I e saiBol1.JH378287 1286364 4583 - 2905041 I e aotNan1.NW_018494782v1 1500196 41 - 1813869 I e cebCap1.NW_016107695v1 1247467 6 - 2164891 I e dasNov3.JH569188 565445 5413 + 760995 I e canFam3.chr1 56173082 6728 + 122678785 I e chlSab2.chr13 96678567 0 + 98384682 C e cerAty1.NW_012002071v1 1390721 52 + 3144229 I e rheMac8.chr4 170327824 143 + 172585720 I a score=-31634.000000 s hg38.chr6_KB021644v2_alt 100858 31 + 185823 CAT---------------------------------------------------------------------------------------------TGGGTGAGCACT-----GAGCTTGGTGCAGG-CC s panTro5.chr6 173552504 32 + 175400573 TCT---------------------------------------------------------------------------------------------CGGCTGAGCACT-----TAGCTTGGTGCAGGCCC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171790957 32 + 173848474 TCT---------------------------------------------------------------------------------------------CGGCTGAGCACT-----TAGCTTGGTGCAGGCCC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11473431 93 - 12463322 TCTCAGCTGAGCACTGAGCTTGGTGCAGGCCCACTGGGTAAGCACTGAGCTTGGTGCAGGCC-------------------------------TCTCGGCTGAGCACT-----TAGCTTGGTGCAGG-CC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156298220 94 + 157873769 CCT-------------------------------CGGCTGAGCACTGAGCTTGATGCAGGCCCCTCGGCTGAGCACTGAGCTTGATGCAGGCCCCTCGGCTGAGCACT-----GAGCTTGATGCAGGCCC i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169073485 30 - 170955103 ---------------------------------------------------------------------------------------------------AAGCACGTTCACAAGAGGCTGGTGCAGGCC- i macFas5.chr4 C 0 I 31 s manLeu1.NW_012106474v1 8214001 31 - 10857215 ---------------------------------------------------------------------------------------------CGTTGGGTGAACATT-----GAACTTGGTGCAGGCC- i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15606872 12 - 23502949 ---------------------------------------------------------------------------------------------CCTTGGCTAAAC------------------------- i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169879714 4 + 171630274 -------------------------------------------------------------------------------------------------------------------------TGCT----- i calJac3.chr4 C 0 C 0 e otoGar3.GL873575 10947499 39 - 12073884 I e saiBol1.JH378287 1286364 4583 - 2905041 I e aotNan1.NW_018494782v1 1500196 41 - 1813869 I e cebCap1.NW_016107695v1 1247467 6 - 2164891 I e dasNov3.JH569188 565445 5413 + 760995 I e canFam3.chr1 56173082 6728 + 122678785 I e chlSab2.chr13 96678567 0 + 98384682 C e cerAty1.NW_012002071v1 1390721 52 + 3144229 I e macNem1.NW_012011000v1 8359950 37 + 10161646 I e rheMac8.chr4 170327824 143 + 172585720 I a score=2100.000000 s hg38.chr6_KB021644v2_alt 100889 1 + 185823 C s panTro5.chr6 173552536 1 + 175400573 C i panTro5.chr6 C 0 C 0 s panPan2.chr6 171790989 1 + 173848474 C i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11473524 1 - 12463322 C i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156298314 1 + 157873769 C i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169073546 1 - 170955103 C i macFas5.chr4 I 31 C 0 s manLeu1.NW_012106474v1 8214032 1 - 10857215 C i manLeu1.NW_012106474v1 C 0 I 187 e otoGar3.GL873575 10947499 39 - 12073884 I e saiBol1.JH378287 1286364 4583 - 2905041 I e aotNan1.NW_018494782v1 1500196 41 - 1813869 I e cebCap1.NW_016107695v1 1247467 6 - 2164891 I e calJac3.chr4 169879718 0 + 171630274 C e dasNov3.JH569188 565445 5413 + 760995 I e colAng1.NW_012114488v1 15606884 0 - 23502949 C e canFam3.chr1 56173082 6728 + 122678785 I e chlSab2.chr13 96678567 0 + 98384682 C e cerAty1.NW_012002071v1 1390721 52 + 3144229 I e macNem1.NW_012011000v1 8359950 37 + 10161646 I e rheMac8.chr4 170327824 143 + 172585720 I a score=31243.000000 s hg38.chr6_KB021644v2_alt 100890 18 + 185823 TCGGCTGGGTACTTAGCT s panTro5.chr6 173552537 18 + 175400573 TTGGCTGGGTACTTAGAT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171790990 18 + 173848474 TTGGCTGGGTACTTAGAT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11473525 18 - 12463322 TTGGCTGGGTACTTAGCT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156298315 18 + 157873769 TCGGCTGAGAACCTAGCT i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169073547 18 - 170955103 TCGGCTGAGCACTGGGCT i macFas5.chr4 C 0 C 0 s manLeu1.NW_012106474v1 8214220 18 - 10857215 TTGGGTGAGCACTGAGGT i manLeu1.NW_012106474v1 I 187 C 0 s colAng1.NW_012114488v1 15606884 8 - 23502949 ----------ACTTGGCT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169879718 16 + 171630274 --GACTGAGTACTTAGCT i calJac3.chr4 C 0 C 0 e otoGar3.GL873575 10947499 39 - 12073884 I e saiBol1.JH378287 1286364 4583 - 2905041 I e aotNan1.NW_018494782v1 1500196 41 - 1813869 I e cebCap1.NW_016107695v1 1247467 6 - 2164891 I e dasNov3.JH569188 565445 5413 + 760995 I e canFam3.chr1 56173082 6728 + 122678785 I e chlSab2.chr13 96678567 0 + 98384682 C e cerAty1.NW_012002071v1 1390721 52 + 3144229 I e macNem1.NW_012011000v1 8359950 37 + 10161646 I e rheMac8.chr4 170327824 143 + 172585720 I a score=153467.000000 s hg38.chr6_KB021644v2_alt 100908 50 + 185823 TGGTGCAGGCCCGTTGGGTGAGCACTGAGCTGGGTGCAGACCCCTCGGCT s panTro5.chr6 173552555 50 + 175400573 TGGTGCAGGCCCGTTGGGTGAGCACTGAGCTGGGTGCAGACCCCTCAGCT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171791008 49 + 173848474 TGGTGCAGGCCCGTTGGGTGAGCACTGAGCTGGGTGCAGA-CCCTCAGCT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11473543 50 - 12463322 TGGTGCAGGCCCGTTGGGTGAGCACTGAGCTGGGTGCAGACCCCTCGGCT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156298333 50 + 157873769 TGGTGCAGGCCCATTGCGTGAGCACTGAGCTTGGTGCAGGCCCCTCAGCT i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169073565 50 - 170955103 CGGTGCAGGCCCGTTGGGTGAGCACTGGGCTCGGTGCACGGCCGTTGGGT i macFas5.chr4 C 0 T 100 s manLeu1.NW_012106474v1 8214238 50 - 10857215 TGGTGCAGGCCCGTTGGGTGAACACTGAACTTGGTGCAGGCCCGTTGGGT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15606892 50 - 23502949 TGGTGCAGGCCCGTTGGGTGAGCACTGAGCTTGGCGCAGGCCCGTTGGGT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169879734 50 + 171630274 TGGTGCAGGCTGGTTGACTGAGTACTTAGCTTAATGCAGGTCTGCTGACT i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1247473 50 - 2164891 TGGTGCAGGCCTGTCGGCTGAGCACTCAGCTTGGTGCAGGCCCCTTGGCC i cebCap1.NW_016107695v1 I 6 C 0 e otoGar3.GL873575 10947499 39 - 12073884 I e saiBol1.JH378287 1286364 4583 - 2905041 I e aotNan1.NW_018494782v1 1500196 41 - 1813869 I e dasNov3.JH569188 565445 5413 + 760995 I e canFam3.chr1 56173082 6728 + 122678785 I e chlSab2.chr13 96678567 0 + 98384682 C e cerAty1.NW_012002071v1 1390721 52 + 3144229 I e macNem1.NW_012011000v1 8359950 37 + 10161646 I e rheMac8.chr4 170327824 143 + 172585720 I a score=37674.000000 s hg38.chr6_KB021644v2_alt 100958 15 + 185823 GAGCACT-------GAGCTTGT s panTro5.chr6 173552605 15 + 175400573 GAGCACT-------GAGCTTGT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171791057 15 + 173848474 GAGCACT-------GAGCTTGT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11473593 15 - 12463322 GAGCACT-------GAGCTTGT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156298383 15 + 157873769 GAGCACT-------GAGCTTAG i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169073515 22 - 170955103 AAGCACGTTCACAAGAGGCTGG i macFas5.chr4 T 100 C 0 s manLeu1.NW_012106474v1 8214288 15 - 10857215 GAGCACT-------GAGGTTGG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15606942 15 - 23502949 GAACACT-------GAGCTTGG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169879784 15 + 171630274 GAGTACT-------TAGCTTGG i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1247523 15 - 2164891 GAGTGCT-------TAGCTTGG i cebCap1.NW_016107695v1 C 0 C 0 e otoGar3.GL873575 10947499 39 - 12073884 I e saiBol1.JH378287 1286364 4583 - 2905041 I e aotNan1.NW_018494782v1 1500196 41 - 1813869 I e dasNov3.JH569188 565445 5413 + 760995 I e canFam3.chr1 56173082 6728 + 122678785 I e chlSab2.chr13 96678567 0 + 98384682 C e cerAty1.NW_012002071v1 1390721 52 + 3144229 I e macNem1.NW_012011000v1 8359950 37 + 10161646 I e rheMac8.chr4 170327824 143 + 172585720 I a score=70966.000000 s hg38.chr6_KB021644v2_alt 100973 17 + 185823 TGCAGGCCTCTCAGCTG s panTro5.chr6 173552620 17 + 175400573 TGCAGGCCTCTCAGCTG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171791072 17 + 173848474 TGCAGGCCTCTCAGCTG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11473608 17 - 12463322 TGCAGGCCTCTCAGCTG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156298398 17 + 157873769 TGCAGGCCCCTTGGCTG i nomLeu3.chr3 C 0 I 364 s rheMac8.chr4 170327967 17 + 172585720 TGCAGGGCCCTCGGCTG i rheMac8.chr4 I 143 C 0 s macFas5.chr4 169073537 17 - 170955103 TGCAGGGCCCTCGGCTG i macFas5.chr4 C 0 C 0 s cerAty1.NW_012002071v1 1390773 17 + 3144229 TGCAGGGCCCTCGGCTG i cerAty1.NW_012002071v1 I 52 C 0 s manLeu1.NW_012106474v1 8214303 17 - 10857215 TGCAGGGCCGTTGGGTG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15606957 17 - 23502949 CGCAGGCCCGTTGGGTG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169879799 17 + 171630274 TGCAGGTCTGCTGACTG i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1247538 17 - 2164891 TGCAGGCCTGTTGACTG i cebCap1.NW_016107695v1 C 0 C 0 e otoGar3.GL873575 10947499 39 - 12073884 I e saiBol1.JH378287 1286364 4583 - 2905041 I e aotNan1.NW_018494782v1 1500196 41 - 1813869 I e dasNov3.JH569188 565445 5413 + 760995 I e canFam3.chr1 56173082 6728 + 122678785 I e chlSab2.chr13 96678567 0 + 98384682 C e macNem1.NW_012011000v1 8359950 37 + 10161646 I a score=16577.000000 s hg38.chr6_KB021644v2_alt 100990 3 + 185823 AGC s panTro5.chr6 173552637 3 + 175400573 AGC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171791089 3 + 173848474 AGC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11473625 3 - 12463322 AGC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156298779 3 + 157873769 AGC i nomLeu3.chr3 I 364 C 0 s rheMac8.chr4 170327984 3 + 172585720 AGC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169073554 3 - 170955103 AGC i macFas5.chr4 C 0 C 0 s cerAty1.NW_012002071v1 1390790 3 + 3144229 AGC i cerAty1.NW_012002071v1 C 0 C 0 s manLeu1.NW_012106474v1 8214320 3 - 10857215 AGC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15606974 3 - 23502949 AGC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169879816 3 + 171630274 AGT i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1247555 3 - 2164891 AGT i cebCap1.NW_016107695v1 C 0 C 0 e otoGar3.GL873575 10947499 39 - 12073884 I e saiBol1.JH378287 1286364 4583 - 2905041 I e aotNan1.NW_018494782v1 1500196 41 - 1813869 I e dasNov3.JH569188 565445 5413 + 760995 I e canFam3.chr1 56173082 6728 + 122678785 I e chlSab2.chr13 96678567 0 + 98384682 C e macNem1.NW_012011000v1 8359950 37 + 10161646 I a score=188656.000000 s hg38.chr6_KB021644v2_alt 100993 40 + 185823 ACTTAGCTTGGTGCAGGCCCCTTGGCTGAGTACTTAGCTT s panTro5.chr6 173552640 40 + 175400573 ACTTAGCTTGGTGCAGGCCCCTTGGCTGAGTACTTAGCTT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171791092 39 + 173848474 ACTTAGCTTGGTGCAGG-CCCTTGGCTGAGTACTTAGCTT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11473628 39 - 12463322 ACTTAGCTTGGTGCAGG-CCCTTGGCTGAGTACTTAGCTT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156298782 40 + 157873769 ACTTAGCTTGGTGCAGGCCCTTCAGCTGAGCACTGAGCTT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170327987 40 + 172585720 ACTGGGCTCGGTGCAGGCCCGTTGGGTGAGCACCGGGCTC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169073557 40 - 170955103 ACTGGGCTCGGTGCAGGCCCGTTGGGTGAGCACTGGGCTC i macFas5.chr4 C 0 C 0 s cerAty1.NW_012002071v1 1390793 40 + 3144229 ACTGGGCAAGGTGCAGGCCCGTTGGGTGAGCACTGGGCTC i cerAty1.NW_012002071v1 C 0 C 0 s manLeu1.NW_012106474v1 8214323 40 - 10857215 ACTGAGGTTGGTGCAGGCCCATTGGGTGAGCACTTAGGTT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15606977 40 - 23502949 ACTGAGCTTGGTGCAGGCCCCTTGGCTAAACACTTGGCTT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169879819 39 + 171630274 ACTTAGCTTGGTGCAGGCTGGTTGACTGAGTACTTAG-AT i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1247558 40 - 2164891 ACTTAGCTTAATGCAGGTCTGTTGACTGGGTACTTAGTTT i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1500237 40 - 1813869 ACTTAGCTTGGTGCAGGCCTGTTGACTGAGTACTTAGCTT i aotNan1.NW_018494782v1 I 41 I 178 e otoGar3.GL873575 10947499 39 - 12073884 I e saiBol1.JH378287 1286364 4583 - 2905041 I e dasNov3.JH569188 565445 5413 + 760995 I e canFam3.chr1 56173082 6728 + 122678785 I e chlSab2.chr13 96678567 0 + 98384682 C e macNem1.NW_012011000v1 8359950 37 + 10161646 I a score=44360.000000 s hg38.chr6_KB021644v2_alt 101033 11 + 185823 GGGGCAGGCCC s panTro5.chr6 173552680 11 + 175400573 GGGGCAGGCCC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171791131 11 + 173848474 GGGGCAGGCCC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11473667 11 - 12463322 GGGGCAGGCCC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156298822 11 + 157873769 GGTGCAGGCCC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170328027 11 + 172585720 GGTGCACGGCC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169073597 11 - 170955103 GGTGCACGGCC i macFas5.chr4 C 0 C 0 s cerAty1.NW_012002071v1 1390833 11 + 3144229 GGTGCACGGCC i cerAty1.NW_012002071v1 C 0 C 0 s manLeu1.NW_012106474v1 8214363 11 - 10857215 GGTGCAGGGCC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15607017 11 - 23502949 GGTGCAGGCCC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169879858 10 + 171630274 GGTGCAGGCC- i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1247598 11 - 2164891 GGTGCAGGCTC i cebCap1.NW_016107695v1 C 0 I 51 e otoGar3.GL873575 10947499 39 - 12073884 I e saiBol1.JH378287 1286364 4583 - 2905041 I e aotNan1.NW_018494782v1 1500277 178 - 1813869 I e dasNov3.JH569188 565445 5413 + 760995 I e canFam3.chr1 56173082 6728 + 122678785 I e chlSab2.chr13 96678567 0 + 98384682 C e macNem1.NW_012011000v1 8359950 37 + 10161646 I a score=106246.000000 s hg38.chr6_KB021644v2_alt 101044 36 + 185823 ATTGGGTGAGCAATGAGCTTGGTGCAGGGCTCTCAG s panTro5.chr6 173552691 36 + 175400573 ATTGGGTGAGCAATGAGCTTGGTGCAGGGCTCTTGG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171791142 36 + 173848474 ATTGGGTGAGCAATGAGCTTGGTGCAGGGCTCTTGG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11473678 36 - 12463322 ATTGGGTGAGCAATGAGCTTGGTGCAGGGCTCTTGG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156298833 36 + 157873769 CTCGGCTGAGCAATGAGCTTGGTGCAGGGCCCTTGG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170328038 36 + 172585720 GTTGGGTGAACACTGGGCTCGGTGCAGGCCCATTGG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169073608 36 - 170955103 GTTGGGTGAACACTGGGCTCGGTGCAGGCCCATTGG i macFas5.chr4 C 0 C 0 s cerAty1.NW_012002071v1 1390844 36 + 3144229 GTTGGGTGAACACTGGGCTCGGTGCAGGCCCGTTGG i cerAty1.NW_012002071v1 C 0 C 0 s manLeu1.NW_012106474v1 8214374 36 - 10857215 GTTGGGTGAACACTGGGCTTGGTGCAGGCCCGTTGG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15607028 36 - 23502949 GTTGGGTGAGCACTGAGCTTGGCGCAGGCCCGTTGG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169879868 5 + 171630274 -----------------CTTGA-------------- i calJac3.chr4 C 0 C 0 e otoGar3.GL873575 10947499 39 - 12073884 I e saiBol1.JH378287 1286364 4583 - 2905041 I e aotNan1.NW_018494782v1 1500277 178 - 1813869 I e cebCap1.NW_016107695v1 1247609 51 - 2164891 I e dasNov3.JH569188 565445 5413 + 760995 I e canFam3.chr1 56173082 6728 + 122678785 I e chlSab2.chr13 96678567 0 + 98384682 C e macNem1.NW_012011000v1 8359950 37 + 10161646 I a score=-1275.000000 s hg38.chr6_KB021644v2_alt 101080 1 + 185823 C s panTro5.chr6 173552727 1 + 175400573 C i panTro5.chr6 C 0 C 0 s panPan2.chr6 171791178 1 + 173848474 C i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11473714 1 - 12463322 C i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156298869 1 + 157873769 C i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170328074 1 + 172585720 G i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169073644 1 - 170955103 G i macFas5.chr4 C 0 C 0 s cerAty1.NW_012002071v1 1390880 1 + 3144229 G i cerAty1.NW_012002071v1 C 0 C 0 s manLeu1.NW_012106474v1 8214410 1 - 10857215 G i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15607064 1 - 23502949 G i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169879873 1 + 171630274 C i calJac3.chr4 C 0 C 0 s aotNan1.NW_018494782v1 1500455 1 - 1813869 C i aotNan1.NW_018494782v1 I 178 C 0 e otoGar3.GL873575 10947499 39 - 12073884 I e saiBol1.JH378287 1286364 4583 - 2905041 I e cebCap1.NW_016107695v1 1247609 51 - 2164891 I e dasNov3.JH569188 565445 5413 + 760995 I e canFam3.chr1 56173082 6728 + 122678785 I e chlSab2.chr13 96678567 0 + 98384682 C e macNem1.NW_012011000v1 8359950 37 + 10161646 I a score=51049.000000 s hg38.chr6_KB021644v2_alt 101081 9 + 185823 TGAGCACTT s panTro5.chr6 173552728 9 + 175400573 TGAGCACTT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171791179 9 + 173848474 TGAGCACTT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11473715 9 - 12463322 TGAGCACTT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156298870 9 + 157873769 TGGGCACTT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170328075 9 + 172585720 TGAGCACTG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169073645 9 - 170955103 TGAGCACTG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8359987 9 + 10161646 TGAGCACTG i macNem1.NW_012011000v1 I 37 C 0 s cerAty1.NW_012002071v1 1390881 9 + 3144229 TGAGCACTG i cerAty1.NW_012002071v1 C 0 C 0 s manLeu1.NW_012106474v1 8214411 9 - 10857215 TGAGCACTG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15607065 9 - 23502949 TGAGCACTG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169879874 9 + 171630274 TAAGGACTT i calJac3.chr4 C 0 C 0 s aotNan1.NW_018494782v1 1500456 9 - 1813869 TGAGTACTT i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10947499 39 - 12073884 I e saiBol1.JH378287 1286364 4583 - 2905041 I e cebCap1.NW_016107695v1 1247609 51 - 2164891 I e dasNov3.JH569188 565445 5413 + 760995 I e canFam3.chr1 56173082 6728 + 122678785 I e chlSab2.chr13 96678567 0 + 98384682 C a score=50443.000000 s hg38.chr6_KB021644v2_alt 101090 7 + 185823 AGCTTGG s panTro5.chr6 173552737 7 + 175400573 AGCTTGG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171791188 7 + 173848474 AGCTTGG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11473724 7 - 12463322 AGCTTGG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156298879 7 + 157873769 AGCTTGG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170328084 7 + 172585720 AGGTTGG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169073654 7 - 170955103 AGGTTGG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8359996 7 + 10161646 AGGTTGG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1390890 7 + 3144229 AGGTTGG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96678567 7 + 98384682 AGGTTGG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8214420 7 - 10857215 AGGTTGG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15607074 7 - 23502949 AGCTTGG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169879883 7 + 171630274 AGCTTGG i calJac3.chr4 C 0 C 0 s aotNan1.NW_018494782v1 1500465 7 - 1813869 AGCTTGG i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10947499 39 - 12073884 I e saiBol1.JH378287 1286364 4583 - 2905041 I e cebCap1.NW_016107695v1 1247609 51 - 2164891 I e dasNov3.JH569188 565445 5413 + 760995 I e canFam3.chr1 56173082 6728 + 122678785 I a score=73860.000000 s hg38.chr6_KB021644v2_alt 101097 8 + 185823 TGCAGGCC s panTro5.chr6 173552744 8 + 175400573 TGCAGGCC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171791195 8 + 173848474 TGCAGGCC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11473731 8 - 12463322 TGCAGGCC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156298886 8 + 157873769 TGCAGGCC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170328091 8 + 172585720 TGCAGGCC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169073661 8 - 170955103 TGCAGGCC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8360003 8 + 10161646 TGCAGGCC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1390897 8 + 3144229 TGCAGGCC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96678574 8 + 98384682 TGCAGGCC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8214427 8 - 10857215 TGCAGGCC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15607081 8 - 23502949 CGCAGGCC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169879890 8 + 171630274 TTCAGACC i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1247660 8 - 2164891 TACAGGCC i cebCap1.NW_016107695v1 I 51 C 0 s aotNan1.NW_018494782v1 1500472 8 - 1813869 TGCAGGCC i aotNan1.NW_018494782v1 C 0 I 604 e otoGar3.GL873575 10947499 39 - 12073884 I e saiBol1.JH378287 1286364 4583 - 2905041 I e dasNov3.JH569188 565445 5413 + 760995 I e canFam3.chr1 56173082 6728 + 122678785 I a score=38759.000000 s hg38.chr6_KB021644v2_alt 101105 8 + 185823 CCTTGGCT s panTro5.chr6 173552752 8 + 175400573 CATTGGCT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171791203 8 + 173848474 CATTGGCT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11473739 8 - 12463322 CATTGGCT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156298894 7 + 157873769 C-TTGGCT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170328099 8 + 172585720 CGTTGGGT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169073669 8 - 170955103 CGTTGGGT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8360011 8 + 10161646 CGTTGGGT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1390905 8 + 3144229 CGTTGGGT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96678582 8 + 98384682 CGTTGGGT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8214435 8 - 10857215 CGTTGGGT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15607089 8 - 23502949 CGTTGGGT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169879898 8 + 171630274 CACTGGCT i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1247668 7 - 2164891 C-TTGGCT i cebCap1.NW_016107695v1 C 0 C 0 e otoGar3.GL873575 10947499 39 - 12073884 I e saiBol1.JH378287 1286364 4583 - 2905041 I e aotNan1.NW_018494782v1 1500480 604 - 1813869 I e dasNov3.JH569188 565445 5413 + 760995 I e canFam3.chr1 56173082 6728 + 122678785 I a score=137684.000000 s hg38.chr6_KB021644v2_alt 101113 24 + 185823 GAACACTGAGCC----TGGTGCAGACCC s panTro5.chr6 173552760 24 + 175400573 GAACACTGAGCC----TGGTGCAGACCC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171791211 24 + 173848474 GAACACTGAGCC----TGGTGCAGACCC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11473747 24 - 12463322 GAACACTGAGCC----TGGTGCAGACCC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156298901 24 + 157873769 GAACACTGAGCC----TGGTGCAGGCCC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170328107 24 + 172585720 GAGCACTGTGGT----TGGTGCAAGCCC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169073677 24 - 170955103 GAGCACTGTGGT----TGGTGCAAGCCC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8360019 24 + 10161646 GAGCACTGTGGT----TGGTGCAAGCCC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1390913 24 + 3144229 GAGCACTGTGGT----TGGTGCAAGCCC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96678590 24 + 98384682 GAACACTGAGGT----TGGTGCATGCCC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8214443 24 - 10857215 GAGCACTGAGGT----TGGTGCAGGCCC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15607097 24 - 23502949 GAACACTGAGCT----TGGTGCAGGCCC i colAng1.NW_012114488v1 C 0 I 434 s calJac3.chr4 169879906 23 + 171630274 GA-CACTTAGCT----TGACGCAGACCT i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1247675 23 - 2164891 GA-CACTTAGCT----TGGTACAGACCT i cebCap1.NW_016107695v1 C 0 C 0 s otoGar3.GL873575 10947538 26 - 12073884 GAGCACCGAGCTCACATGGCAGGAGG-- i otoGar3.GL873575 I 39 C 0 e saiBol1.JH378287 1286364 4583 - 2905041 I e aotNan1.NW_018494782v1 1500480 604 - 1813869 I e dasNov3.JH569188 565445 5413 + 760995 I e canFam3.chr1 56173082 6728 + 122678785 I a score=1385834.000000 s hg38.chr6_KB021644v2_alt 101137 216 + 185823 CTTGGCtgagtacctaccgactgtcagaggcacacgagtgctctcatgcagcttctcacttaatcttcacaacctctcacagcca--ggggtgacatcaatgccattttcagatg-ggaaactgagcctcagggaactcaatgagccacccagggttccactgtaaagggagaaagggaaatgaaggttcccctgtgtcctggGAGGCATCCTCTATCA s panTro5.chr6 173552784 216 + 175400573 CTTGGCtgagtacctaccgactgtcagaggcacacgagtgctctcatgcagcttctcacttaatcttcacaacctctcacagcca--ggggtgacatcaataccattttcagatg-ggaaactgagcctcaggaaactcaatgagccacccagggttccactgtaaagggagaaagggaaatgaaggttcccctgtgtcctggGAGGCATCCTCTATCA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171791235 216 + 173848474 CTTGGCtgagtacctaccgactgtcagaggcacacgagtgctctcatgcagcttctcacttaatcttcacaacctctcacagcca--ggggtgacatcaatgccattttcagatg-ggaaactgagcctcaggaaactcaatgagccacccagggttccactgtaaagggagaaagggaaatgaaggttcccctgtgtcctggGAGGCATCCTCTATCA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11473771 216 - 12463322 CTTGGCtgagtacctaccgactgtcagaggcacacgagtgctctcatgcagcttcttacttaatcttcacaacttctcacagcca--ggggtgacatcaatgccattttcaggtg-ggaaactgagcctcagggaactcaatgagccacccagggttccactgtaaagggagaaagggaaatgaaggttcccctgtgtcctggGAGGCATCCTCTATCA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156298925 216 + 157873769 CGTGGCTGAGTACCTAGCGACTGTCAGAGGCACACGagtgctctcacgcagcttctcacttaatcttcacaacctctcacagcca--ggggtgacatcagtgccattttcagatg-ggaagctgagcctcagggaactcagtgagccacccagggtcccacTGTAAAGGAAGAAAGGGAAATGAAGGTTCCCCTGTGTCCTGGGAAGCATCCTCTATCA i nomLeu3.chr3 C 0 I 1 s rheMac8.chr4 170328131 215 + 172585720 ATTGGGTGAGTACCTGGCAACTACCAGGGGCACACGagtgttctcatgcagcttctcacttaa-cttcacaacctctcacagcca--ggggtgacatcaatgccattttcagatg-ggaagctgagcctcagggaactcaatgagccacccagggtcccactgtacagggagaaagggaaatgaaggttcacctgtgtcctgggaggcgtcctctatca i rheMac8.chr4 C 0 I 1 s macFas5.chr4 169073701 215 - 170955103 ATTGGGTGAGTACCTGGCAACTGCCAGGGGCACACGagtgttctcatgcagcttctcacttaa-cttcacaacctctcacagcca--ggggtgacatcaatgccattttcagatg-ggaagctgagcctcagggaactcaatgagccacccagggtcccactgtacagggagaaagggaaatgaaggttcacctgtgtcctgggaggcgtcctctatcA i macFas5.chr4 C 0 I 1 s macNem1.NW_012011000v1 8360043 215 + 10161646 ATTGGGTGAGTACCTGGCAACTACCAGGGGCACACGAGTgttctcatgcagcttctcacttaa-cttcacaacctctcacagcca--ggggtgacatcaatgccattttcagatg-ggaagctgagcctcagggaactcagtgagccacccagggtcccactgtacagggagaaagggaaatgaaggttcacctgtgtcctgggaggcgtcctctatca i macNem1.NW_012011000v1 C 0 I 1 s cerAty1.NW_012002071v1 1390937 215 + 3144229 ATTGGGTGAGTACCTGGCAACTACCAGGGGCACACGAGTgctctcatgcagcttctcacttaa-cttcacaacctctcacagcca--ggggtgacatcagtgccattttcagatg-ggaagctgagcctcagggaactcagtgagccacccagggtcccactgtatagggagaaagggaaatgaaggttcacctgtgtcctgggaggcgtcctctatca i cerAty1.NW_012002071v1 C 0 I 1 s chlSab2.chr13 96678614 216 + 98384682 CTTGACTGAGTACCTGGCAACTGCCAGGGGCACACGagtgctctcatgcagcttctcacttaatcttcaaaacctctcacagcca--ggagtgacatcaatgctattttcagatg-ggaagctgagcctcagggaactcaatgagccacccagggtcccactgtacagggagaaagggaaatgaaggttcacctgtgtcctgggaggcgtcctctatcA i chlSab2.chr13 C 0 I 1 s manLeu1.NW_012106474v1 8214467 215 - 10857215 CTTGGCTGAGTACCTGGCAATGGCCAGGGGCACACGagtgctctcatgcagcttctcacttaa-cttcacaacctctcacagcca--ggggtgacatcagtgccattttcagatg-ggaagctgagcctcagggaactcagtgagccacccagggtcccactgtgcagggagaaagggaaatgaaggttcacctgtgtcctgggaggcgtcctctatca i manLeu1.NW_012106474v1 C 0 I 1 s calJac3.chr4 169879929 212 + 171630274 GTTGGCTGGGTACCTAGCGACTGTCAGGGG-ACAtgagtgctctcatgcaacttctcacttaatcctcacagcctctcacaggca--ggggtggcatcagtgccattttcagatg-gaaagctgaaccccagggaactcagtgacccatccagagtcccaTCGTAAAGGG-GAAGGGGAAATGAAGGCTCGTCTGTGTCCT-GCAGGCGTCC-CCATGA i calJac3.chr4 C 0 I 1 s cebCap1.NW_016107695v1 1247698 205 - 2164891 GTTGGCTGGGTATCTAGCAACTCTCAGGG------aagtgctctcatgcaacttctcacttaattctgacagcctctcacaggca--ggggtggcattaatgccattttcagatg-ggaagctgagccccaaggaactcagtgagccatccagagttccacCGTAAAGGG-GAAAGGGAAATGAAGGCTGGTCTGTGTCCT-GCAGGCAT---CCATAA i cebCap1.NW_016107695v1 C 0 I 1 s otoGar3.GL873575 10947564 199 - 12073884 CCTGGCTGTGT---------CTGTCAGTAGCAAAC--GTGCTCCC---CAGTTTCTCACTCAGCTCTCGTGAC-TCTCACAGTAGATGGGGTGACCTTAACACTGAttgcagatgagaaaattggacttcagagaattcaggaagttttccagggttccagggtaag----aaaatggAGGTG-AGATTTGCCTGCATCTCACAGGGTACCCTCAGTGG i otoGar3.GL873575 C 0 I 1 e saiBol1.JH378287 1286364 4583 - 2905041 I e aotNan1.NW_018494782v1 1500480 604 - 1813869 I e dasNov3.JH569188 565445 5413 + 760995 I e colAng1.NW_012114488v1 15607121 434 - 23502949 I e canFam3.chr1 56173082 6728 + 122678785 I a score=613457.000000 s hg38.chr6_KB021644v2_alt 101353 88 + 185823 TGTGAGTACCTGGAGGCCAGCGTTCGAGGCTGCTCAGGATCACGAGAATCATCAGCACCTCTCAGTTTTCCAGCCCCTGTTTCAGCAC s panTro5.chr6 173553000 88 + 175400573 TGTGAGTACCTGGAGGCCAGCGTTCGAGGCTGCTCAGGATCATGAGAATCATCAACACCTATCAGTTTTCCAGCCCTTGTTTCAGCAC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171791451 88 + 173848474 TGTGAGTACCTGGAGGCCAGCGTTCGAGGCTGCTCAGGATCATGAGAATCATCAACACCTATCAGTTTTCCAGCCCTTGTTTCAGCAC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11473987 88 - 12463322 TGTGAGTACCTGGAGGCCAGCGTTTGAGGCTGCTCAGGATCATGAGAATCATCAACACCTCTCAGTTTTCCAGCCCTTGTTTCAGCAC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156299142 88 + 157873769 TGCGAGTACCTGGGGGCCAGCGTTTGAGGCCGCTCAGGATCACGAGAATCATCAACACCTCTCAGTTTTCCAGCCCTTGTTTCAGCAC i nomLeu3.chr3 I 1 C 0 s rheMac8.chr4 170328347 87 + 172585720 tGTGAATACCTGGAGGCCAGCGTTCGAGGCTGCTCAGGATAACGAGAATCATCAACACCTCTCAGTTTTCCAGCCCTTGTTTCT-CAC i rheMac8.chr4 I 1 C 0 s macFas5.chr4 169073917 87 - 170955103 TGTGAGTACCTGGGGGCCAGCGTTCGAGGCTGCTCAGGATAACGAGAATCATCAACACCTCTCAGTTTTCCAGCCCTTGTTTCT-CAC i macFas5.chr4 I 1 C 0 s macNem1.NW_012011000v1 8360259 87 + 10161646 tGTGAATACCTGGAGGCCAGCGTTCGAGGCTGCTCAGGATAACGAGAATCATCAACACCTCTCAGTTTTCCAGCCCTTGTTTCT-CAC i macNem1.NW_012011000v1 I 1 C 0 s cerAty1.NW_012002071v1 1391153 87 + 3144229 tGTGAGTACCTGGGGGCCAGCGTTCGAGGCTGCTCTGGATAACGAGAATCATCAACACCTCTCAGTTTTCCAGCCCTTGTTTCT-CAC i cerAty1.NW_012002071v1 I 1 C 0 s chlSab2.chr13 96678831 87 + 98384682 TGTGAGTACCTGGGGGCCAGCGTTCGAGGCTGCTCAGGATAACGAGAATCATCAACACCTCTCAGTTTTCCAGCCCTTGTTTCA-CAC i chlSab2.chr13 I 1 C 0 s manLeu1.NW_012106474v1 8214683 87 - 10857215 tGTGAGTACCTGGGGGCCAGTGTTCGAGGCTGCTCCGGATAACGAGAATCATCAACACCTCTCAGTTTTCCAGCCCTTGTTTCT-CAC i manLeu1.NW_012106474v1 I 1 C 0 s colAng1.NW_012114488v1 15607555 87 - 23502949 TGTGAGTATCTGGAGGCCAGGGTTCGAGGCTGCTCAGGATAACGAGAATCATCAACACCTCTCAGTTTTCCAGCCCTTGTTTCA-CAC i colAng1.NW_012114488v1 I 434 C 0 s calJac3.chr4 169880142 81 + 171630274 TCTGAGGAGCTGGAGGCCAACGTCC-AAACTGCTCAGG---ACGAGAATCATCAACGCCTCCCAGTTACCCA---CTCATTTCAGCAC i calJac3.chr4 I 1 C 0 s cebCap1.NW_016107695v1 1247904 84 - 2164891 TGTGAGGACCTGGAGGACAGTGTTC-AAGCTGCTCAGG---ACAAGAATCATCAACGCCTCCTGGTTCCCCAGTCCTTGTTTCAGCAC i cebCap1.NW_016107695v1 I 1 C 0 s otoGar3.GL873575 10947764 85 - 12073884 TGTGGGGGACCAG-GGCCAGTG-CCAAGGCCACTCAGATCGACAAGAACCATTCACACCTCCTCTTCACCTAACCAAGCTTTGG-CAT i otoGar3.GL873575 I 1 C 0 e saiBol1.JH378287 1286364 4583 - 2905041 I e aotNan1.NW_018494782v1 1500480 604 - 1813869 I e dasNov3.JH569188 565445 5413 + 760995 I e canFam3.chr1 56173082 6728 + 122678785 I a score=358277.000000 s hg38.chr6_KB021644v2_alt 101441 63 + 185823 CTGATCTCTCCCCAAACATCAGGCTGGTTATATTCAAAGATACACGATAAGCTGCATTTT----CCG s panTro5.chr6 173553088 67 + 175400573 CTGATCTGTCCCCAAACATCAGGCTGGTTATATTCAAAAATACATGATGAGCTGCATTTTCCAGCCA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171791539 67 + 173848474 CTGATCTGTCCCCAAACATCAGGCTGGTTATATTCAAAAATACATGATGAGCTGCATTTTCCAGCCA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11474075 67 - 12463322 CTGATCTGTCCCCAAACATCAGGCTGGTTATATTCAAAAATACATGATAAGCTGCATTTTCCAGCCA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156299230 67 + 157873769 CTGCTCTGTCCCCAAACATCAGGCTGGTTATACTAAAAAATACATGATGAGCTGCATTTTCCAGCCA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170328434 60 + 172585720 CTAATCTGCCCCCAAACATCAGGTTGGTTATATTCAAAAATACATGATGAGCTCCATTTT------- i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169074004 60 - 170955103 CTAATCTGCCCCCAAACATCAGGTTGGTTATATTCAAAAATACATGATGAGCTCCATTTT------- i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8360346 60 + 10161646 CTAATCTGCCCCTAAACATCAGGTTGGTTATATTCAAAAATACATGATGAGCTCCATTTT------- i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1391240 60 + 3144229 CTAATCTGCCCCCAAACATCAGGCTGGTTATATTCAAAAATACATGATGAGCTCCATTTT------- i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96678918 60 + 98384682 CTAATCTGCCCCCAAACATCAGGCTGGTTATATTCAAAAATACATGATGAGCTCCATTTT------- i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8214770 60 - 10857215 CTAATCTGCCCCCAAACATCAGGCTGGTTATATTCAAAAATACATGATGAGCTCCATTTT------- i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15607642 55 - 23502949 CTAATCTGCCCC-AAAC----GGCTGGTTATATTAAAAAATACATGATGAGCTCCATTTT------- i colAng1.NW_012114488v1 C 0 C 0 s cebCap1.NW_016107695v1 1247988 62 - 2164891 GTGACCTGTCCC-AAACATGAGGCTGATTATTTGCAAAAACACGTGATGTGCTGCATTTTCCA---- i cebCap1.NW_016107695v1 C 0 I 3 s otoGar3.GL873575 10947849 61 - 12073884 CTGACCTGCCCC-AGACACAAGGC-GATTATGTTCACAAACACATAATGAGGTGCTTGTCCCA---- i otoGar3.GL873575 C 0 I 3 e saiBol1.JH378287 1286364 4583 - 2905041 I e aotNan1.NW_018494782v1 1500480 604 - 1813869 I e calJac3.chr4 169880223 0 + 171630274 C e dasNov3.JH569188 565445 5413 + 760995 I e canFam3.chr1 56173082 6728 + 122678785 I a score=445106.000000 s hg38.chr6_KB021644v2_alt 101504 55 + 185823 TTCCAGATGCCAGGGCTCCCCAGGGGCTCTGTCTGTCCCCTTTCAAGTCCCATCA s panTro5.chr6 173553155 55 + 175400573 TTCCAGATGCCAGGGCTCCCCAGGGGTTCTGTCTGTCCCCTTTCAAGTCCCATCA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171791606 55 + 173848474 TTCCAGATGCCAGGGCTCCCCAGGGGTTCTGTCTGTCCCCTTTCAAGTCCCATCA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11474142 54 - 12463322 TTCCAGATGCCAGGGCTCCCCAGGGGTTCTGTCTGT-CCCTTTCAAGTCCCATCA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156299297 54 + 157873769 TTCCAGATGCCAGGGCTCCCCAGGGGTTCTGTCTGTCCCCTTTTAAGTCCCATC- i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170328494 53 + 172585720 --CCAGATGCCAGGACTCCCCAGGGGTTCTGTCTGTCCCCTTTCAAGTCCCATCA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169074064 53 - 170955103 --CCAGATGCCAGGACTCCCCAGGGGTTCTGTCTGTCCCCTTTCAAGTCCCATCA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8360406 53 + 10161646 --CCAGATGCCAGGACTCCCCAGGGGTTCTGTCTGTCCCCTTTCAAGTCCCATCA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1391300 53 + 3144229 --CCAGATGTCAGGACTCCCTAGGGGTTCTGTCTGTCCCCTTTCAAGTCCCATCA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96678978 53 + 98384682 --CCAGATGCCAGGGCTCGCCAGGGGTTCTGTCTGTTCCCTTTCAAGTCCCATCA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8214830 53 - 10857215 --CCAGATGCCAGGACTCCCCAGGGGTTCTGTCTGTCCCCTTTCAAGTCCCATCA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15607697 53 - 23502949 --CCAGATGCCAGGACTCCCCAGGGGTTCTGTCTGTCCCCTTTCAAGTCCCATCA i colAng1.NW_012114488v1 C 0 C 0 s cebCap1.NW_016107695v1 1248053 54 - 2164891 TTCCAGATGTCAGGGTTCTCCAGGGGTTCCGTCTGGCACCTTTCAAGT-CCATCA i cebCap1.NW_016107695v1 I 3 C 0 s aotNan1.NW_018494782v1 1501084 54 - 1813869 TTCCAGATGTCAGGGCTCTCCAGGGGTTCCGTTTGGCCCCTTTCAAGT-CCATCA i aotNan1.NW_018494782v1 I 604 C 0 s otoGar3.GL873575 10947913 55 - 12073884 TTCCAGATGCTAGGGGCCCCCAGGGGCTCTATCCATCCGTGTTCAAGTCACATCA i otoGar3.GL873575 I 3 C 0 e saiBol1.JH378287 1286364 4583 - 2905041 I e calJac3.chr4 169880223 0 + 171630274 C e dasNov3.JH569188 565445 5413 + 760995 I e canFam3.chr1 56173082 6728 + 122678785 I a score=350278.000000 s hg38.chr6_KB021644v2_alt 101559 43 + 185823 GGGGCCTGCC-CTCAGACACCACAGGACCTGACAAGGTATCCAC s panTro5.chr6 173553210 43 + 175400573 GGGGCCTGCC-CTCAGACACCACAGGACCTGACAAGGTATCCAC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171791661 43 + 173848474 GGGACCTGCC-CTCAGACACCACAGGACCTGACAAGGTATCCAC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11474196 43 - 12463322 GGGGCCTGCC-CTCAGACACCACAGGACCTGACAAGGTATCCAC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156299351 43 + 157873769 GGGGCCTGCC-CTCAGACACCACAGGACCTGACAAGGTATTCAT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170328547 43 + 172585720 GAGGCCTGCC-CTCAGACACCACATGACCTGACAAGGTATCTAT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169074117 43 - 170955103 GAGGCCTGCC-CTCAGACACCACATGACCTGACAAGGTATCTAC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8360459 43 + 10161646 GAGGCCTGCC-CTCAGACACCACATGACCTGACAAGGTATCTAT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1391353 43 + 3144229 GAGGCCTGCC-CTCAGACACCACATGACCTGACAAGGCATCTAT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96679031 43 + 98384682 GAGGCCTGCC-CTCAGACACCACATGACCTGACAAGGTATCCAC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8214883 43 - 10857215 GAGGCCTGCC-GTCAGACACCACATGACCTGACAAGGTATCTAT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15607750 43 - 23502949 GAGGCCTGCC-CTCAGACACCACATGACCTGACAAGGTATCCAC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169880223 42 + 171630274 GGGGCCTGTC-CTCAGACACTACAC-ACCTGACAAGGTTTCCAC i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1248107 42 - 2164891 GGGGCCTGTC-CTCAGACAGCACAC-ACCTGACAAAGTTTCCAC i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1501138 43 - 1813869 GGGTCATGTCGCTCAGACACCACAC-ACCTGACAAGGTTTCCAC i aotNan1.NW_018494782v1 C 0 I 65 s otoGar3.GL873575 10947968 27 - 12073884 -GGGCCTGTCTCTCAGATGCCACATGAC---------------- i otoGar3.GL873575 C 0 C 0 e saiBol1.JH378287 1286364 4583 - 2905041 I e dasNov3.JH569188 565445 5413 + 760995 I e canFam3.chr1 56173082 6728 + 122678785 I a score=398579.000000 s hg38.chr6_KB021644v2_alt 101602 60 + 185823 GGCCTCATGATCCTTCACCCCTGCCCCCGGCTGG---GGAAAG------------------------GCTCAAGGCTGCACGGCTCT s panTro5.chr6 173553253 60 + 175400573 GGCCTCACGATCCTTCACCCCTGCCCCCGGCTGG---GGAAAG------------------------GCTCAAGGCTGCACCGCTCT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171791704 60 + 173848474 GGCCTCACGATCCTTCACCCCTGCCCCCGGCTGG---GGAAAG------------------------GCTCAAGGCTGCACCGCTCT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11474239 60 - 12463322 GGCCTCACGATCCTTCACCCCTGCCCCCGGCTGG---GGAAAG------------------------GCTCAACGCCGCACGGCTCT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156299394 60 + 157873769 GGCCTCATGACCCTTCACCCCCACCCCCGGCTGG---GGAAAG------------------------GCTCAATGCTGCACGGCTCT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170328590 60 + 172585720 GGCCTCACAACCTTTCACCTCTTCCCCTGGCTGA---GGAAAG------------------------GCTCAAAACGGTACGGCTCT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169074160 60 - 170955103 GGCCTCACAACTTTTCACCTCTTCCCCCGGCTGA---GGAAAG------------------------GCTCAAAACGGTACGGCTCT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8360502 60 + 10161646 GGCCTCACAACCTTTCACCTCTTCCCCCGGCTGA---GGAAAG------------------------GCTCAAAACGGTACGGCTCT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1391396 60 + 3144229 GGCCTCACAACCTTTCACCTCTGCCCCCGGCTGA---GGAAAG------------------------GCTCAAAACGGTACGGCTCT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96679074 60 + 98384682 GGCCTCACAACCCTTCACCTCTGCCCCCGGCTGA---GGAAAG------------------------GCTCAAAGCGGCATGGCTCC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8214926 60 - 10857215 GGCCTCACAACCTTTCACCTCTGCCCCCGGCTGA---GGAAAG------------------------GCTCAAAACGGTACGGCTCT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15607793 60 - 23502949 GGCCTCATAACCCTTCACCTCTGCCCCCAGCTGA---GGAAAG------------------------GCTCAAAGCAGCACGGCTCT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169880265 60 + 171630274 AGCCTCACGACCCTTCACCCCCACCCTCAGCTGG---GGAAAG------------------------GCTGGAGGCTGCGCAGCTCT i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1248149 60 - 2164891 AGCCTCACAACTCTTCACTGCCACCCCCAGCTGG---GGAAAG------------------------GCTGGAGGCTGCGCAGCGCT i cebCap1.NW_016107695v1 C 0 C 0 s otoGar3.GL873575 10947995 77 - 12073884 ---------ACCCTGCACCCCCCATACCTGCCAGCCAGGAAAGCAAGTATCAGAGGAAACCAAGGACGCTAAATCCTGC-CGTCCCT i otoGar3.GL873575 C 0 C 0 e saiBol1.JH378287 1286364 4583 - 2905041 I e aotNan1.NW_018494782v1 1501181 65 - 1813869 I e dasNov3.JH569188 565445 5413 + 760995 I e canFam3.chr1 56173082 6728 + 122678785 I a score=1001616.000000 s hg38.chr6_KB021644v2_alt 101662 132 + 185823 ---GGGG-----------TTCCTAGGACAAGCTCTGGGTGGGGCAGTCTGCCAGCTCAGAGACAGCA-GGAGCAGGAGAGGTGAGGACTGGA--TATCAGGT-GTAGAAAAGAAA-CCGGCTCATCAGCTTTCATCCTCCATTAGCTCCAG s panTro5.chr6 173553313 132 + 175400573 ---GGGG-----------TTCCTAGGACAAGCTCTGGGTGGGGGAGTCTGCCAGCTCAGAGACAGCA-GGAGCAGGAGAGGTGAGGACTGGA--TATCGGGT-GTAGAAAAGAAA-CCGGCTCATCAGCTTTCATCCTGCATTAGCTCCAG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171791764 132 + 173848474 ---GGGG-----------TTCCTAGGACAAGCTCTGGGTGGGGGAGTCTGCCAGCTCAGAGACAGCA-GGAGCAGGAGAGGTGAGGACTGGA--TATCGGGT-GTAGAAAAGAAG-CCGGCTCATCAGCTTTCATCCTGCATTAGCTCCAG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11474299 132 - 12463322 ---GGGG-----------TTCCCAGGACAAGCTCTGGGTGGGGGAGTCTGCCATCTCAGAGACAGCA-GGAGCAGGAGAGGTGAGGACTGGA--TATCGGGT-GTGGAAAAGAAA-CCGGCTCATCAGCTTTCATCCTCCATTAGCTCCAG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156299454 132 + 157873769 ---GGGG-----------TTCCTAGGACAAGCGCTGGGTGGGGGAGTCTGCCAGCTCAGAGACAGCA-GGAGCAGGAGAGGTGGGGACTGGA--TATCGGGT-TTAGAAAAGAAA-CTGGCTCATCAGCTTTCATCCTCCGTTAGCTCCAG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170328650 124 + 172585720 ---GGGC-----------ATCCTAGGACAAGCTCTGGGTGGGGAAG--------TTCAGAGACAGCA-GGAGCGGGAGAGGTGGGGACTGGA--TAGCGGGT-GTAGAAAAGAAA-CCGGCTCATCAGCTTTCATCCTCCGTTAGCTCCAG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169074220 123 - 170955103 ---GGGC-----------CTCCTAGGACAAGCTCTGGGT-GGGAAG--------CTCAGAGACAGCA-GGAGCGGGAGAGGTGGGGACTGGA--TAGCGGGT-GTAGAAAAGAAA-CCGGCTCATCAGCTTTCATCCTCCGTTAGCTCCAG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8360562 124 + 10161646 ---GGGC-----------ATCCTAGGACAAGCTCTGGGTGGGGAAG--------TTCAGAGACAGCA-GGAGCGGGAGAGGTGGGGACTGGA--TACTGGGT-GTAGAAAAGAAA-CTGGCTCATCAGCTTTCATCCTCCGTTAGCTCCAG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1391456 124 + 3144229 ---GGGC-----------ATCCTAGGACAAGCTCTGGGTGGGGAAG--------CTCAGAGACAGCA-GGAGCGGGAGAGGTGGGGACTGGA--TACCGGGT-GTAGAAAAGAAA-TTGGCTCATCAGCTTGCATCCTCCGTTAGCTCCAG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96679134 124 + 98384682 ---GGGC-----------GTCCTAGGACAAGCTCTGGGTGGGAAAG--------CTCAGAGACAGCA-GGAGCGGGACAGGTGAGGACTGGA--TACCGGGT-GTAGAAAAGAAA-CCGGCTCATCAGCTTGCATCCTCCGTTAGTTCCAG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8214986 124 - 10857215 ---GGGC-----------ATCCTAGGACAAGCTCTGGGTGGGGAAG--------CTCAGAGACAGCA-GGAGCGGGAGAGGTGGGGACTGGA--TACCGGGT-GTAGAAAAGAAA-CTGGCTCATCAGCTTGCATCCTCCGTTAGCTCCAG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15607853 124 - 23502949 ---GGGA-----------GTCCTAGGACAAGCTCTGGGTGGGGAAG--------CTCAGAGACAGCA-GGAGCGAGAGAGGTGGGGACTGGA--TACCGGGT-GTAGAAAATAAA-CCGGCTCATCAGCTTTCATCTTCTGTTAGCTTCAG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169880325 132 + 171630274 ---GGGG-----------GTCCTGGGATAAGCTCTGGGTGGGGGAGTCTGGCAGTGCAGAGACACCA-GGAGCGAGAGAGGTGGGGACTGGA--TACCAGGT-GTAGAAAATAAA-CTGGCTCGTCAGCTTTCATCCCCCATTAGCTCCAG i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1248209 132 - 2164891 ---GGGG-----------ATCCTGGGACAAGCTCTGGGTCGGGGAGTCTGCCAGTGCAGAGACAGCA-GGAGCAAGAGAGGTGGGGACTGGA--TACCAGGT-GTAGAAAAGAAA-TCAGCTTGTCAGCTTTCATCCCCCGTTAGCTCCAG i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1501246 135 - 1813869 ---GGGG-----------TCCCTGGGACAAGCTC-GGGTGGGGGAGT-TGCCAGTGCAGAGACAGCAGGGAGCACGAGAGGTGGGGACTGGATTTACCAGGTGGTAGAAGAGAAATCCGGCTCGTCAGCTTTCATCCCCCATTCGCTCCAG i aotNan1.NW_018494782v1 I 65 I 79 s otoGar3.GL873575 10948072 112 - 12073884 AAAGGGGCCAGCTCCTCACCCCCAGGACTAGCTCTGGTCAGAGG----------GTCAGAGA-AGCA-GCAGCTTGTG---------CTTGA--GGGGAGCC-CCAGAGAGGAAA-CAGG-------GCTCCCATCTGCTGTGG------- i otoGar3.GL873575 C 0 C 0 e saiBol1.JH378287 1286364 4583 - 2905041 I e dasNov3.JH569188 565445 5413 + 760995 I e canFam3.chr1 56173082 6728 + 122678785 I a score=511476.000000 s hg38.chr6_KB021644v2_alt 101794 74 + 185823 CACGATGGGGGTGGACAGGTGGTCTCGGCTGCAGGGGTAGCATGGGGACGGAGGCGGCCGGCCCGAAGGACCAT s panTro5.chr6 173553445 74 + 175400573 CACGATGGGGGTGGACAGGTGGTCTCGGCTGCAGGGGTAGCATGGGGATGGAGGCGGCCGGCCCGAAGGACCAT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171791896 74 + 173848474 CACGATGGGGGTGGACAGGTGGTCTCGGCGGCAGGGGTAGCATGGGGATGGAGGCGGCCGGCCCGAAGGACCAT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11474431 73 - 12463322 CACGAT-GGGGTGGACAGGTGGTCTCGGCTGCAGGGGTAGCATGGGGACGGAGGCGGCCGGCCCGAAGGACCAT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156299586 74 + 157873769 CACGATGGGGGTGGACAGGTGGTCTCGGCTTCAGGGGTAGCGTGGGGACGGAGGTGGCCGGCCCGAAGGACCAT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170328774 74 + 172585720 CACAATGGGGGTGGACAGGTGGTCTCAGCTGCAGGGGTAGCACGGGGACGGAGGCAACTGGCCCAAAGGACCAT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169074343 74 - 170955103 CACAATGGGGGTGGACAGGTGGTCTCAGCTGCAGGGGTAGCACGGGGACGGAGGCAACTGGCCCAAAGGACCAT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8360686 74 + 10161646 CACAATGGGGGTGGACAGGTGGTCTCAGCTGCAGGGGTAGCACGGGGACGGAGGCAACTGGCCCAAAGGACCAT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1391580 74 + 3144229 CACAATGGGGATGGACAGGTGGTCTGGGCTGCAGGGGTAGCACGGGGACGGAGGCAGCCGGCCCAAAGGACCAT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96679258 74 + 98384682 CACAATGGGGGTGGACAGGTGGTCTCGGCTGCAGGGGTAGCACGGGGAAGGAGGCAGCTGGCCCAAAGGACCGT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8215110 74 - 10857215 CACAATGGGGGTGGACAGGTGGTCTGGGCTGCAGGGGTAGCACGGGGACGGAGGCAGCCGGCCCAAAGGACCGT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15607977 74 - 23502949 CACAATGGGGGTGGACAGGTGGTCTCGGCTGCAGGGATAGCACGGGGATGGAGGCAGCCGGCCTAAAGGACCAT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169880457 72 + 171630274 CAAAATGGGGGTGGACAGGTGGTCTCAGGCACAGGG-TGGCATGGGGATGGAGGCGTCT-GCCCGCAGGACCAG i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1248341 72 - 2164891 CACAACGCAGGTGGATAGGTGGTCTCAGCTGCAGGG-TGGCATGGGGACGGAGGCGTCT-GCCCGCAGTACCAG i cebCap1.NW_016107695v1 C 0 C 0 s otoGar3.GL873575 10948184 61 - 12073884 --TGCTGTGGGTGTCCAG-------TAGCTTCTGTG--TGCTTGGGGA--GGGGTGCCCTGCACTTGGGGCAGT i otoGar3.GL873575 C 0 C 0 e saiBol1.JH378287 1286364 4583 - 2905041 I e aotNan1.NW_018494782v1 1501381 79 - 1813869 I e dasNov3.JH569188 565445 5413 + 760995 I e canFam3.chr1 56173082 6728 + 122678785 I a score=226891.000000 s hg38.chr6_KB021644v2_alt 101868 25 + 185823 GGGTCAGAAGCTGAGTGGCAGGCCC s panTro5.chr6 173553519 25 + 175400573 GGGTCAGAAGCTGAGTGGCAGGCCC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171791970 25 + 173848474 GGGTCAGAAGCTGAGTGGCAGGCCC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11474504 25 - 12463322 GGGTCAGAAGCTGAGTGGCAGGCCC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156299660 25 + 157873769 GGGTCAGAAGCTAAGTGGCAGGCCC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170328848 25 + 172585720 GAGTCAGAAGCTGAGTGGCAGGCCT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169074417 25 - 170955103 GAGTCAGAAGCTGAGTGGCAGGCCT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8360760 25 + 10161646 GAGTCAGAAGCTGAGTGGCAGGCCT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1391654 25 + 3144229 GAGTCAGAAGCTGAGTGGCAGGCCC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96679332 25 + 98384682 GGGTCAGAAGCTGAGTGGCAGGCCC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8215184 25 - 10857215 GGATCAGAAGCTGAGTGGCAGGCCC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15608051 25 - 23502949 GGGTCAGAAGCTGAGTGGCAGGCCC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169880529 25 + 171630274 GGGTCAGAAGCTGAGTGGCAGGCCC i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1248413 25 - 2164891 GGGTCAGGAGCTGAGTGGCAGGCCC i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1501460 25 - 1813869 GGGTCAGGAGCTGAGTGGCAGGCCC i aotNan1.NW_018494782v1 I 79 I 960 s otoGar3.GL873575 10948245 9 - 12073884 TGCTCAGAC---------------- i otoGar3.GL873575 C 0 C 0 e saiBol1.JH378287 1286364 4583 - 2905041 I e dasNov3.JH569188 565445 5413 + 760995 I e canFam3.chr1 56173082 6728 + 122678785 I a score=1646784.000000 s hg38.chr6_KB021644v2_alt 101893 239 + 185823 TGCAGTGGCCACTGTGAGTGTGGGGTGTGGCTATGCTGTGACCACACGACCAGG-CTGAGGGCTGCTTGGAGCCTGCATCCCAGGCTCACGCTGGCCAGGCTCATCACTATCTGTACTCAGAGCTGGGTTGACCGTCCTTCCGGGCCTCCGTGTGTGCCCTGGACTGACCTCCAGCCTGGGGTGTGGACAGCAGCATGCTCCCTCCAG-CAGGCTGCCTTGCCCTCCTCTGCAGGCCTTTG s panTro5.chr6 173553544 239 + 175400573 TGCAGTGGCCGCTGTGAGTGTAGGGGGTGGCTATGCTGTGACCACACGACCAGG-CTGAGGGCTGCTTGGAGCCTGCATCCCAGGCTCACGGTGGCCAGGCTCATCACTATCTGTACTCAGAGCTGGGTTGACCGTCCTTCCGGGCCTCTGTGTGTGCCCTGGACTGACCTCCAGCCTGGGGTGTGGACGGCAGCATGCTCCCTCCAG-CAGGCTGCCTTGCCCTCCTCCGCAGGCCTTTG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171791995 239 + 173848474 TGCAGTGGCCGCTGTGAGTGTGGGGGGTGGCTATGCTGTGACCACACGACCAGG-CTGAGGGCTGCTTGGAGCCTGCATCCCAGGCTCACGGTGGCCAGGCTCATCACTATCTGTACTCAGAGCTGGGTTGACCGTCCTTCCGGGCCTCTGTGTGTGCCCTGGACTGACCTCCAGCCTGGGGTGTGGACGGCAGCATGCTCCCTCCAG-CAGGCTGCCTTGCCCTCCTCCGCAGGCCTTTG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11474529 239 - 12463322 TGCAGTGGCCACTGTGAGTGTGGGGTGTGGCTATGCTGTGACCACACGACCAGG-CTGAGGGCTGCTTGGAGCCTGCATCCCAGGCTCACGGTGGCCAGGCTCATCACTATCTGTACTCAGAGCTGGGTTGACCGTCCTTCCGGGCCTCTGTGTGTGCCCTGGACTGACCTCCAGCCTGGGGTGTGGGCGGCAGCATGCTCCCTCCAG-CAGGCTGCCTTGCCCTCCTCCGCAGGCCTTTG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156299685 237 + 157873769 CGCAGTGGCCGC--TGAGTGTGGGGGGTGGCCATGCTGTGACCACACGACCAGG-CTGAGGGCTGCTTGGAGCCTGCATCACAGGCTCACGGTGGCCAGGCCCATCACTGTCTGTACTCAGAGCTGGGTTGACCGTCCTTCCGGGCCTCTGTGTGTGCCCTGGACTGACCTCCAGCCTGGGATGTGGACGGCAGCGTGCTCCCTCCAA-CAGGCTGCCTTGCCCTCCTCTGCAGGCCTTTG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170328873 239 + 172585720 TGCAGTGGTGGCTGTGCATGTGGGGGTTGGCCGCGCTGTGACCACACGACCAGG-CTGAGGGCTGCTTGGAGCCTGCGTCACAGGCTCATGGTGGCCAGGCTCCTCACTGCCTGTACTCAGAGCTGGGTTCACCATGCTTCCGGGCCTCTGTGTGCGCCCTGGACTTACCGCCAGCCTGGGCTGTGGACGGCAGCGTGCTCCCTCCGG-CAGACTGCCTTGCCCTCCTCTGCAGGCCTGTG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169074442 239 - 170955103 TGCAGTGGTGGCTGTGCATGTGGGGGTTGGCCGCGCTGTGACCACACGACCAGG-CTGAGGGCTGCTTGGAGCCTGCGTCACAGGCTCATGGTGGCCAGGCTCCTCACTGCCTGTACTCAGAGCTGGGTTCACCATCCTTCCGGGCCTCTGTGTGTGCCCTGGACTTACCGCCAGCCTGGGCTGTGGACGGCAGCGTGCTCCCTCCGG-CAGACTGCCTTGCCCTCCTCTGCAGGCCTGTG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8360785 239 + 10161646 TGCAGTGGTGGCTGTGCATGTGGGGGTTGGCCGCGCTGTGACCACACGACCAGG-CTGAGGGCTGCTTGGAGCCTGCGTCACAGGCTCATGGTGGCCAGGCTCCTCACTGTCTGTACTCAGAGCTGGGTTGACCATGCTTCCGGGCTTCTGTGTGTGCCCTGGACTTACCGCCAGCCTGGGCTATGGACGGCAGTGTGCTCCCTCCGG-CAGACTGCCTTGCCCTCCTCTGCAGGCCTGTG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1391679 239 + 3144229 TGCAGTGGTGGCTGTGCATGTGGGGGTTGGCCGTGCTGTGACCACACGACCAGG-CTGAGGGCTGCTTGGAGCCTGCGTCACAGGCTCGTGGTGGCCAGGCTCCTCACTCTCTGTACTCAGAGCTGGGTTGACCATCCTTCCGGGCCTCTGTGTGTGCCCTGGACTAACCACCAGCCTGGGCTGTGGACGGCAGTGCGCTCCCTCCAG-CAGGCTGCCTTGCCCTCCTCTGCAGGCCTGTG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96679357 239 + 98384682 TGCAGTGGCCGCTGTGAGTGTGGGGGTTGGCCGTGCTGTGACCACTCGACCAGG-CTGAGGGCTGCTTGGAGCCTGCGTCACAGGCTCGTGGTGACCAGGCTCCTCACTGTCTGTACTCAGAGCTGGGTTGACCATCCTTCCGGGTCTCTGTGTGTGCCCTGGACTTACCGCCAGCCTGGGCTGTGGACGGCAGCGTGCTCCCTCCAG-CAGGCCACCTTGCCCTCCTCTGCAGGCCTGTG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8215209 239 - 10857215 TGCAGTGGTGGCTGTGCATGTGGGGGTTGGCTGCGCTGTGACCACATGACCAGG-CTGAGGGCTGCTTGGAGCCTGCGTCACAGGCTTGTGGTGGCCAGGCTCCTCACTCTCTGTACTCAGAGCTGGGTTGACCATCCTTCCGGGCCTCTGTGTGTGCCCTGGACTTACCACCAGCCTGGGCTGTGGACGGCAGCGCGCTCCCTCCAG-CAGGCTGCCTTGCCCTCCTCTGCAGGCCTGTG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15608076 239 - 23502949 TGCAGTGGCCGCTGTGAGTGTGGGGGTTGGCTGCGCTGTGACCACACGACCAGC-CTGAGGGCTGCTTGGAGCCTGCGTCACAGGCTCATGGTGGCCAGGCTCCTCACTGTCTGTACTCAGAGCTGGGTTGACCATCCTTCCGGGCCTCTGTGTGTGCCCTGGACTTACCGCCAGCCTGGGCTGTGGACGGCAGCGTGCTCCCTCCAG-CAGGCTGCCTTGCCTTCCTCTGCAGGCCTGTG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169880554 232 + 171630274 TTCTGAGGCTGCTATGTGT---GGGGTTGGCCGAGCTGTGACCACATGGCTGGG-CTGAGGGATGCTTGGAGCCTGCATCACAGGCTCACAGAGGCCAGGCTTGGCACCGTCGGCACTCAGAGCTGGGCTGACCATCCTTCCGGGCC-CCATGTGCA-CCTGGACTGACCTCCAGCCTGAG-TGTGGATGGCAGCGTGCTCCCTCCGG-CAGGCTGAGTCGCCCTCCTTGGCA-GCACGTG i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1248438 219 - 2164891 TTCTGTGGCTGCTGTGTGT---GGGGTTGGCCGAGCTATGACCACATGGCTGGG-CTGAGGGCTGCTTGGAGCCTGCGTCACAGGCTCA-------------TGGCACTGTAAGCACTCAGAGGTGGGTTGACCATCCTTCTGGGCC-CTGTGTGTG-CCTGGACTGACCTCTAGCCTGAG-TGTGGATGGCCACGTGCTCCCTCCGG-CAGGCCGCCTCGCCCTCCTCTGCA-GCATGTG i cebCap1.NW_016107695v1 C 0 C 0 s otoGar3.GL873575 10948254 151 - 12073884 ------------TGGGACTACCAGGGTCAG--AGTCTGTGACCACACAGCTGGGACCCAGGGGTAGTGAGGAACTAGGTCAGAGGT-----GTGGACAG------------------------------------------TGGCCC------TGTCCCCTG----------CAGCCT------------TCAACCTCCTCCCTGCAGCCAGACTGCCAGGCCACCCTCCTCAGACCTCC- i otoGar3.GL873575 C 0 C 0 e saiBol1.JH378287 1286364 4583 - 2905041 I e aotNan1.NW_018494782v1 1501485 960 - 1813869 I e dasNov3.JH569188 565445 5413 + 760995 I e canFam3.chr1 56173082 6728 + 122678785 I a score=1406507.000000 s hg38.chr6_KB021644v2_alt 102132 255 + 185823 GCTGCTGCGGCCCCAGCTCTGGGCCATGAGCCGGGCTGGGTCCTTTGGCAGGCCTCCGCTCGTTCATCCCCCAAGAGATCCACGATGCCAAGAAGGTGGCCGGACAGAGGTGAAAAGCCAGCTCTGGAGG--TTTAGATGCTATGTTCCCGACTTCCTCACCATGCTTCTTCCTGACGTCCTTAACTCCTGCCTCTGAGCAAAGTTCCTGTGCATGTTTCAGAAATTAAGAATGATGAACAAGGGAACACTGAGAGG s panPan2.chr6 171792234 255 + 173848474 GCTGCCGCGGCCCCAGCTCTGGGCCATGAGCCGGGCTGGGTCCTTTTGCAGGCCTCCGCTCATTTATCCCCTAAAAGATTCACGATGCCAAGAAGGTGGCCGGACAGAGGTGAAAAGCCAGCTCTGGAGG--TTTAGATGCTATGTTCCCGACTTCCGCACCGTGCTTCTTGCCGACGTCCTTAACTCCTGCCTCTGAGCAAACTTCCTGTGCATTTTTCAGAAATTAAGAATGATGAATAAGGGAACACTTGGAGG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11474768 254 - 12463322 GCTGCTGCGGCCCCAGCTCTGGGCCATGAGCCGGGCTGGGTCCTTTTGCAGGCCTCCGCTCATTCATCCCCTAAGAGATCCACGATGCCAAGAAGGTGGCC-GACAGAGGTGAAAAGCCAGCTCTGGAGG--TTTAGATGCTGTGTTCCCGACTTCCTCACCGTGCTTCTTCCTGACGTCCTTAACTCCTGCCTCTGAGCAAACTTCCTGTGCATTTTTCAGAAATTAAGAATGATAAATAAGGGAACACTTGGAGG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156299922 250 + 157873769 GCTGCTGCGGCCCCAGCTCTGGGCCGTGAGCTGGGCCGAGTCCTTTTGCAGGCCTCAGCTCATTCATCCCCTAAGAGATCCACGATGCCAAGAAGGTGGCCGGACAGAGGTGAAAAGCCAGCTCTGGAGG--TTTAGATGCTGTGTTCCTGACTTCCTCACCGTG-TTTTTCCTGATGT-CTTACTTCCTGCCTCTGAGCAAACTTCCTGTGCATTTTTCAGAAATTAAGAATG---AATAAGTGGACGCTTGGAGG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170329112 253 + 172585720 GCTGCTGCGGCCCTAGCTCTGAGCCGTGAGCCGGGCTGAGTCCTTTTGCAGGCATCAGC-CCCCCATCCCCTAAGAGACCCATGATGCCAGGAAGGTGGCCGGACAGAGGTGAAAA-CCAGCCCTGGAGG--TTTAGATGCTGTGTTCCCGCCTTCCTCACTGTGCTTCTTCCTGACGTCCTTAACTCCTGCCCCTGAGCAAACTTCCTGTGTGTTTTTCAGAAATTAAGAAAGATGGACAAGTGAATGCTTAGAGG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169074681 253 - 170955103 GCTGCTGCGGCCCTAGCTCTGAGCCGTGAGCCGGGCTGAGTCCTTTTGCAGGCATCAGC-CCCCCATCCCCTAAGAGACCCATGATGCCAGGAAGGTGGCCGGACAGAGGTGAAAA-CCAGCCCTGGAGG--TTTAGATGCTGTGTTCCCGCCTTCCTCACTGTGCTTCTTCCTGACGTCCTTAACTCCTGCCCCTGAGCAAACTTCCTGCGTGTTTTTCAGAAATTAAGAAAGATGGACAAGTGAACGCTTAGAGG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8361024 253 + 10161646 GCTGCTGCGGCCCTAGCTCTGAGCCGTGAGCCGGGCTGAGTCCTTTTGCAGGCATCAGC-CCCCCATCCCCTAAGAGACCCATGATGCCAGGAAGGTGGCCGGACAGAGGTGAAAA-CCAGCCCTGGAGG--TTTAGATGCTGTGTTCCCGCCTTCCTCACTGTGCTTCTTCCTGACGTCCTTAACTCCTGCCCCTGAGCAAACTTCCTGTGTGTTTTTCAGAAATTAAGAAAGATGGACAAGTGAACGCTTAGAGG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1391918 254 + 3144229 GCTGCTGCGGCCCCGGCTGTGAGCCGTGAGCCGGGCTGAGTCCTTTTGCAGGCATCAGCACCCCCATCCTCTAAGAGACCCACGATGCCAGGAAGGTGGCCGGACAGAGGTGAAAA-CCAGCCCTGGAGG--TTTAGATGCTGTGTTCCCGCCTTCCTCACTGTGCTTCTTCCTGACGTCCTTAACTCCTGCCCCTGAGCAAACTTCCTGTGTGTTTTTCAGAAATTAAGAATGATGGACAAGTGAACACTTAGAGG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96679596 254 + 98384682 GCTGTTGCGGCCCCGGCTCTGAGCCGTGAGCCGGGCTGAGTCCTTTTGCAGGCATCAGCTCCCCCATCCCCTAAAAGACCCACGATGCCAGGAAGGTGGCCGGACAGAGGTGAAAA-CCAGTCCTGGAGG--TTTAGATGCTGTGTTCCCGCCTTCCTCACTGTGCTTCTTCCTGACGTCCTTAACTCCTGCCTCTGAGCAAACTTCCTGTGCATTTTTCAGAAATTAAGAATGATGGATAAGTGAACGCTTAGAGG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8215448 254 - 10857215 GCTGCTGCGGCCCCGGCTGTGAGCCGTGAGCCGGGCTGAGTCCTTTTGCAGGCATCAGCACCCCCATCCTCTAAGAGACCCACGATGCCAGGAAGGTGGCCGGACAGAGGTGAAAA-CCAGCCCTGGAGG--TTTAGATGCTGTGTTCCCGCCTTCCTCACTGTGCTTCTTCCTGATGTCCTTAAGTCCTGCCCCTGAGCAAACTTCCTGTGTGTTTTTCAGAAATTAAGAAAGATGGACAAGTGAACACTTAGAGG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15608315 252 - 23502949 GCTGCTACGGCCCCGGCTCTGAGCCGTGAGCCAGACTGAGTCTTTTTGCAGGCATCAGC-CCCCCATCCCCTAAGAGACCCATGATGCCAGGAAGGTGGCTGGACAGAGGTGAAAA-CCAGCCCTGGAGG--TTTAGATGCTGTGTTCCCGCCTTCCTCAC-ATACTTCTTCCTGACATCCTTAGCTCCTACCTCTGAGCAAACTTCCTGTGCGTTTTTCAGAAATTAAGAATGATGGATAAGTGAATGCTTAGAGG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169880786 242 + 171630274 GCTGCTGCAACCCTGGCTTTGGGCCGTGAGCCAGGCAGCATC-TTTCACAGACATCAGCCCACTCATCCCCTAAGAGACCCACAATGCCAAGAAGGTGGC-GGACGGAAGTGAGAC----GCTCTGTAGG--TTCACAGGCTGTGCTCCCAACTTCCCCACCACGCTTGCTCCTGACATCCT------CTGCCTCCGAGCAGACTTCATGTGTGT-TTTCAGAATTTAAGAATGATGAGTAAGTGAACACTTAGAGG i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1248657 243 - 2164891 GCTGCTAGGGCCCCAGCTCTGGGCCATGAGCCAGGGTGCGTC-TTTCACAGGCATCAGCCCACTCATCCCCTAAGAGACCCACAATGCCAAGAAGGTGGAGGGACGAAAGTGAGAC----GCTCCGCAGG--TTCACAGGCTGTGCTCCCAACTTCCCCACTGTGCTTGCTCCTGACATCCT------CTGCCTCTGAGCAGACTTGATGTGTGT-TTTCAGAAATTAAGAATGATGAGTAAGTGAATGCTTAGAGG i cebCap1.NW_016107695v1 C 0 C 0 s otoGar3.GL873575 10948405 151 - 12073884 ----CCGCCACCCTA-------CCCAAGGCCTGGGCAGCCT----------------------------------------------------------------------------CTGGCTCTGTGGGATTTCAGATGCTATCT--CTGGTGCCTGCACAGA----CTTCCTGATTTATCTAACTTGAGTCTC---------TTTATTCTTACTTTTCAGAAATGAGGAACCATGAGTACATGAATGGCT----G i otoGar3.GL873575 C 0 C 0 e saiBol1.JH378287 1286364 4583 - 2905041 I e aotNan1.NW_018494782v1 1501485 960 - 1813869 I e dasNov3.JH569188 565445 5413 + 760995 I e canFam3.chr1 56173082 6728 + 122678785 I e panTro5.chr6 173553783 0 + 175400573 C a score=282217.000000 s hg38.chr6_KB021644v2_alt 102387 45 + 185823 GAGGGAACTTTTGTGAATTGATGATGATATTTAGGAGCCGTTGCT s panPan2.chr6 171792489 45 + 173848474 GAGGGAACTTTAGTGAATTGATGATGATATTTAGGAGCCGTTGCT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11475022 45 - 12463322 GAGGGAACTTTTGTGAATGGATGATGATATTTAGGAGCCGTTGCT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156300172 45 + 157873769 GAGCGAACTTTTGTGAATTGATGATGATACGTAGGAGGCGTCGCT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170329365 45 + 172585720 GAAGGAACTTTTGTGAATTGGTGATGATACGTAGGAGCCATTGCT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169074934 45 - 170955103 GAAGGAACTTTTGTGAATTGGTGATGATACGTAGGAGCCATTGCT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8361277 45 + 10161646 GAAGGAACTTTTGTGAATTGGTGATGATACGTAGGAGCCATTGCT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1392172 45 + 3144229 GAAGGAACTTTTGTGAATTGGTGATGATACGTGGGAGCCATTGCT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96679850 45 + 98384682 GAAGGAACTTTTGTGAATTGGTGATGATACAGAGGAGCCATTGCT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8215702 45 - 10857215 GAAGGAACTTTTGTGAATTGGTGATGATACGTAGGAGCCATTGCT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15608567 45 - 23502949 GAAGGAACTTTTGTGAATTGGTGATGATACCTAGGAGCCATTGCT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169881028 34 + 171630274 AAGGGAACTTTTGTGAAATGATTATGATAAATAG----------- i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1248900 45 - 2164891 GAGGAAACTTTTGTGAAATGATTATGATAAATAGGAGCTGCTACT i cebCap1.NW_016107695v1 C 0 C 0 s otoGar3.GL873575 10948556 45 - 12073884 GAGGGAACTTTTATGAAAAAATTGCAATAAATAAGAAAGATTGCT i otoGar3.GL873575 C 0 I 1 s dasNov3.JH569188 570858 40 + 760995 GAGGGAATTTTTATGAAGTTATTTTAA-----ATGAGAAATTGCT i dasNov3.JH569188 I 5413 C 0 e saiBol1.JH378287 1286364 4583 - 2905041 I e aotNan1.NW_018494782v1 1501485 960 - 1813869 I e canFam3.chr1 56173082 6728 + 122678785 I e panTro5.chr6 173553783 0 + 175400573 C a score=1820.000000 s hg38.chr6_KB021644v2_alt 102432 1 + 185823 -G s panTro5.chr6 173553783 1 + 175400573 -G i panTro5.chr6 C 0 C 0 s panPan2.chr6 171792534 1 + 173848474 -G i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11475067 1 - 12463322 -G i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156300217 1 + 157873769 -G i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170329410 1 + 172585720 -G i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169074979 1 - 170955103 -G i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8361322 1 + 10161646 -G i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1392217 1 + 3144229 -G i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96679895 1 + 98384682 -G i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8215747 1 - 10857215 -G i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15608612 1 - 23502949 -G i colAng1.NW_012114488v1 C 0 C 0 s cebCap1.NW_016107695v1 1248945 1 - 2164891 -G i cebCap1.NW_016107695v1 C 0 C 0 s dasNov3.JH569188 570898 1 + 760995 T- i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10948601 1 - 12073884 I e saiBol1.JH378287 1286364 4583 - 2905041 I e aotNan1.NW_018494782v1 1501485 960 - 1813869 I e calJac3.chr4 169881062 0 + 171630274 C e canFam3.chr1 56173082 6728 + 122678785 I a score=861936.000000 s hg38.chr6_KB021644v2_alt 102433 160 + 185823 GAAAGCTGTAACTGCCTGAACTAGCGGTGGGTCAAAACT---TGGTCCAGTTATCTCAAATACCCA-CTTGTATGTTTCTGGGT--AGTCTTTTC-AAGAATTAAAGGAAAGTGA-AAAAAAAGAAAAAAAAG--------------------------------CATCGTTTCTCAGCCTTTCTCATTTACGCTTAGAG s panTro5.chr6 173553784 161 + 175400573 GAAAGCTGTAACTGCCTGAACTAGCGGTGGGTCAAAACT---TGGTCCAGTTATCTCAAATACCCA-CCTGTATGTTTCTGGGC--AGTCTTTTC-AAGAATTAAAGGAAAGTGGGAAAAAAAAAAAAAAAAG--------------------------------CATCGTTTCTCAGCCTTTCTCATTTACGCTTAGAG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171792535 193 + 173848474 GAAAGCTGTAACTGCCTGAACTAGCGGTGGGTCAAAACT---TGGTCCAGTTATCTCAAATACCCA-CCTGTATGTTTCTGGGC--AGTCTTTTC-AAGAATTAAAGGAAAGTGGGAAAAAAAAAAAAAAANAATATACTACTACNNNNNNNNNNNNNNNNNNNNCATCGTTTCTCAGCCTTTCTCATTTACGCTTAGAG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11475068 156 - 12463322 GAAAGCTGTAACTGCCTGAACTAGCGGTGGGTCAAAACT---TGGTCTAGTTATCTCAAATACCCA-CCTGTATGTTTCTGGGT--AGTCTTTTC-AAGAATTAAAGGAAAGCGA-----AAAAAAAAAAAAG--------------------------------CATCGTTTCTCAGCGTTTCTCATTTACGCTTAGAG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156300218 157 + 157873769 GAAAGCTGTAACTGCCTGAACTAGCAGTGGGTCAAAACT---TGGTCCAGCTATCTCAAATACTCA-TTTGTACGTTTCTGGGC--AGTCTTTTC-AAGAATTAGAGGAAAGTGA----GAAAAAAAAAAAAG--------------------------------TATCATTTCTCAGCCTTTCTCATTTACACTTAGAG i nomLeu3.chr3 C 0 I 2 s rheMac8.chr4 170329411 113 + 172585720 GAAAGCTGTAACCGCCTGAAGTAGCAGTGGGTCAAAACT---TGGTCCGGTTATCTCAAATACCCA-TTTGTATGTTTCTGGGC--AGTC---------------------------------------------------------------------------------TTCTCAGACTTTCTCATTTACGCTTAAAG i rheMac8.chr4 C 0 I 2 s macFas5.chr4 169074980 113 - 170955103 GAAAGCTGTAACCGCCTGAAGTAGCAGTGGGTCAAAACT---TGGTCCGGTTATCTCAAATACCCA-TTTGTATGTTTCTGGGC--AGTC---------------------------------------------------------------------------------TTCTCAGACTTTCTCATTTACGCTTAAAG i macFas5.chr4 C 0 I 2 s macNem1.NW_012011000v1 8361323 113 + 10161646 GAAAGCTGTAACCGCGTGAAGTAGCAGTGGGTCAAAACT---TGGTCCGGTTATCTCAAATACCCA-TTTGTATGTTTCTGGGC--AGTC---------------------------------------------------------------------------------TTCTCAGACTTTCTCATTTACGCTTAAAG i macNem1.NW_012011000v1 C 0 I 2 s cerAty1.NW_012002071v1 1392218 113 + 3144229 GAAAGCTGTAACCGCCTGAACTAGCAGTGGGTCAAAACT---TGGTCCGGTCATCTCAAATACCCA-TTTGTGTGTTTCTGGGC--AGTC---------------------------------------------------------------------------------TTCTCAGACTTTCTCATTTACGCTTAAAG i cerAty1.NW_012002071v1 C 0 I 2 s chlSab2.chr13 96679896 113 + 98384682 GAAAGCTGTAACTGCCTGAACTAGCAGTGGGTCAAAACT---TGGTCCGCTCATCTCAAATACCCA-TTTGTATGTTTCTCGGC--AGTC---------------------------------------------------------------------------------TTCTCAGACTTTCTCATTTACGCTTAAAG i chlSab2.chr13 C 0 I 2 s manLeu1.NW_012106474v1 8215748 113 - 10857215 GAAAGCTGTAACCGCCTGAACTAGCAGCGGGTCAAAACT---TGGTCCGGTCATCTCAAATACGCA-TTTGTATGTTTCTGGGC--AATC---------------------------------------------------------------------------------TTCTCAGACTTTCTCATTTACACTTAAAG i manLeu1.NW_012106474v1 C 0 I 2 s colAng1.NW_012114488v1 15608613 113 - 23502949 GAAAGCTGTAACTGCCTAAACTAGCAGTGGGTCAAAACT---TGGTCCGGTTATCTCAAATACCCA-TTTGTATGTTCCTGGGC--AGTC---------------------------------------------------------------------------------TTCTCAGACTTTCTCATTTACGCTTAAAG i colAng1.NW_012114488v1 C 0 I 2 s calJac3.chr4 169881062 150 + 171630274 GCAGGCTGCACCTGCCTGAACTAGTAGTGGGTCCTAATG---TGGTCTCATTACCTCAAATACCAA-CTTCGACGTTTCTGGGC--AGTTTTTTC-AATAATTAAAGGAAAGTGA-----------AAAAAAG--------------------------------TATAATTTCTCAGCCTTTCTCATTTATGCTTAGAG i calJac3.chr4 C 0 I 2 s saiBol1.JH378287 1290947 150 - 2905041 GACAGCTGCACCTGCCTGAACTCGTAGTGGGTCCAAATG---TGGTCTCCTTACCTCAGATACCAA-CTTCGATGTTTCTGGGC--AGTTTTTTC-AAGAATTAAAGGAAAGTGG-----------AAAAAAG--------------------------------TATAATTTCTCAGCCTTTCTCTTTGATGCCTAGAG i saiBol1.JH378287 I 4583 I 2 s cebCap1.NW_016107695v1 1248946 150 - 2164891 GACAGCTGCACCTACCTGAACTAGTAGTGGGTTCAAATG---TGGTCTCCTTACCTCAAATACCCA-CTTCGATGTTTCTGGGC--AGCTTTTTC-AAGAATTAAAGGAAAGTGA-----------AAAAAAG--------------------------------TATAATTTCTCAGCCTTTCTCATTTATGCTTAGAG i cebCap1.NW_016107695v1 C 0 I 2 s otoGar3.GL873575 10948602 156 - 12073884 AAAAGTTGTGACCTCTTGAATTAGAAATGAGTCAAAACTAGATTGTCTGGTTACCTCAAACTTCAG-CTGTCACCTTGCTGAGCAGAGTCTTCTT-AGAGAATAAGAGGAAGTGG-----GAGGGAAACGCAG------------------------------------GTTTCTCTGGTTCTCTTGTCCAGG-TTAGAG i otoGar3.GL873575 I 1 I 311 s dasNov3.JH569188 570899 147 + 760995 GAATGTTGTAACTTCTTGAATTAAGATTGAGTCAAAAGTAGATTGTATAATTACCTCAAATACCAATTTTCTATATTTATAAAC--ATAATATTCTATGAATTTAAAGAAAAGGG-----------AGAGAAG--------------------------------------AACTCAGGTTTTCTTATGTGTAGTAAT-- i dasNov3.JH569188 C 0 C 0 e aotNan1.NW_018494782v1 1501485 960 - 1813869 I e canFam3.chr1 56173082 6728 + 122678785 I a score=611764.000000 s hg38.chr6_KB021644v2_alt 102593 78 + 185823 TCTCCTCACATCACAGACATGCCGGGCAGAGCACTTGGCAAATGTGC-AGCCTTA--AAACAA-GCAAACGAAATCCATTGC s panTro5.chr6 173553945 78 + 175400573 TCTCCTCACACCACAGACATGCCGGGCAGAGCACTTGGCAAATGTGC-AGCCTTA--AAACAA-GCAAACGAAATCCATTGC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171792728 79 + 173848474 TCTCCTCACACCACAGACATGCCGGGCAGAGCACTTGGCAAATGTGC-AGCCTTA--AAACAAGGCAAACGAAATCCATTGC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11475224 78 - 12463322 TCTCCTCACACCACAGACATGCCGGGCAGAGCACTTGGCAAATGTGC-AGCCTTA--AAACAA-GCAAACGAAATCCATTGC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156300377 78 + 157873769 TCTCCTCACACCACAGACATGCTGGGCAGAGAACTTGGCAAATGGGC-AGCCTTA--AAACAA-GCAAATGAAATCCATTGC i nomLeu3.chr3 I 2 C 0 s rheMac8.chr4 170329526 78 + 172585720 TCTCCCCACACCACAGATGTGCCATGCAGAGCACTTGGCAAATGCGC-AGCCTTA--AAACAA-GCAAACGAAATCCATTGC i rheMac8.chr4 I 2 C 0 s macFas5.chr4 169075095 78 - 170955103 TCTCCCCACACCACAGATGTGCCATGCAGAGCACTTGGCAAATGCGC-AGCCTTA--AAACAA-GCAAACGAAATCCATTGC i macFas5.chr4 I 2 C 0 s macNem1.NW_012011000v1 8361438 78 + 10161646 TCTCCCCACACCACAGATGTGCCATGCAGAGCACTTGGCAAATGCGC-AGCCTTA--AAACAA-GCAAACGAAATCCATTGC i macNem1.NW_012011000v1 I 2 C 0 s cerAty1.NW_012002071v1 1392333 78 + 3144229 TCTGCTCACACCACAGACGTGCCGTGCAGAGCACTTGGCAAATGTGC-AGCCTTA--AAACAA-GCAAACGAAATCCATTGC i cerAty1.NW_012002071v1 I 2 C 0 s chlSab2.chr13 96680011 78 + 98384682 TCTGCACACACCACAGACGTGCCGTGCAGAGCACTTGGCAAATGCGA-AGCCTTA--AAACAA-GCAAACAAAATCCATTGC i chlSab2.chr13 I 2 C 0 s manLeu1.NW_012106474v1 8215863 78 - 10857215 TCTGCTCACACCACAGACGTGCCGTGCAGAGCACTTGGCAAATGCGC-AGCCTTA--AAACAA-GCAAACGAAATCCATTGC i manLeu1.NW_012106474v1 I 2 C 0 s colAng1.NW_012114488v1 15608728 79 - 23502949 TCTCCTCACACCACAGACGTGCCATGCAGAACACTTGGCAAATGTGCAAACCTTA--AAACAA-GCAAACGAAATCCATTGC i colAng1.NW_012114488v1 I 2 C 0 s calJac3.chr4 169881214 77 + 171630274 TCTCCTCACAACGCAAC---GCTGTGCAGAGCACCTGGCAAACGTGC-AGCCTTAAGAAGCAA-GCAAGCAAAACCCACTGC i calJac3.chr4 I 2 C 0 s saiBol1.JH378287 1291099 79 - 2905041 TCTCCTCACACCGCAGCAATGCTGTGCAGAGCACCTGG-AAACGTGC-AGCCTTAACAAGCAA-GCAAACAAAATCCATTGC i saiBol1.JH378287 I 2 C 0 s cebCap1.NW_016107695v1 1249098 80 - 2164891 TCTCCTCACAGCGAAGCAATGCCGTGCAGAACACCTGGCAAACATGC-AGCCTTAACAAGCAA-GCAAACAAAATCCATTGC i cebCap1.NW_016107695v1 I 2 I 22 s dasNov3.JH569188 571046 48 + 760995 TTTATTTATA----------------CAGCATATTTGGCAAATGTGC-AGCATTA--AAAATG-TTGA-------------- i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10948758 311 - 12073884 I e aotNan1.NW_018494782v1 1501485 960 - 1813869 I e canFam3.chr1 56173082 6728 + 122678785 I a score=86680.000000 s hg38.chr6_KB021644v2_alt 102671 28 + 185823 CATAGGCCACtttttttttttttttttt s panTro5.chr6 173554023 28 + 175400573 CATAGGCCGCtttttttttttttttttt i panTro5.chr6 C 0 C 0 s panPan2.chr6 171792807 28 + 173848474 CATAGGCCGTCttttttttttttttttt i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11475302 28 - 12463322 CATAGGCCGCtttttctttctttttttt i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156300455 28 + 157873769 CATGGGCTGCttttttatttatttattt i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170329604 24 + 172585720 CATAGGCCGC----tttttttttttttt i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169075173 21 - 170955103 CATAGGCCGC-------ttttttttttt i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8361516 19 + 10161646 CATAGGCCGC---------ttttttttt i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1392411 25 + 3144229 CATAGGCCGCt---tttttttttttttt i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96680089 12 + 98384682 CA-------C---------Ctttttttt i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8215941 19 - 10857215 CATAGGCCGC---------ttttttttt i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15608807 28 - 23502949 CATAGGCCGCtttctttttttttttttt i colAng1.NW_012114488v1 C 0 C 0 s dasNov3.JH569188 571094 28 + 760995 AATAGTCTACTTTTTAGTTTTATTTTTT i dasNov3.JH569188 C 0 I 948 e otoGar3.GL873575 10948758 311 - 12073884 I e saiBol1.JH378287 1291178 0 - 2905041 C e aotNan1.NW_018494782v1 1501485 960 - 1813869 I e cebCap1.NW_016107695v1 1249178 22 - 2164891 I e calJac3.chr4 169881291 0 + 171630274 C e canFam3.chr1 56173082 6728 + 122678785 I a score=204288.000000 s hg38.chr6_KB021644v2_alt 102699 47 + 185823 ttttt-------------gagacggagtctcattcttgtcct-caggctggagtgcaatag s panTro5.chr6 173554051 60 + 175400573 ttttttttttttttttttgagacggagtctcattcttgtcct-caggctggagtgcaatag i panTro5.chr6 C 0 C 0 s panPan2.chr6 171792835 53 + 173848474 ttttt-------tttttgtagacggagtctcattcttgtcct-caggctggagtgcaatag i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11475330 52 - 12463322 ttttt--------tttttgagacggagtctcattcttgtcct-caggctggagtgcaatag i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156300483 49 + 157873769 attta----------tttgagacgaagtctcattc-tgtcct-caggctggagtgcaatag i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170329628 48 + 172585720 ttttt-------------gagatgaagtctcattcttgtcctccaggctggagagaaatag i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169075194 48 - 170955103 ttttt-------------gagatgaagtctcattcttgtcctccaggctggagagaaatag i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8361535 48 + 10161646 ttttt-------------gagatgaagtctcattcttgtcctccaggctggagagaaatag i macNem1.NW_012011000v1 C 0 I 46 s cerAty1.NW_012002071v1 1392436 48 + 3144229 ttttt-------------gagatgaagtctcattcttgtcctccaggctgaagagaaatag i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96680101 48 + 98384682 ttttt-------------gagatgaagtctcattcttttcctccaggctagagagaaatag i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8215960 48 - 10857215 ttttt-------------gagatgaagtctcattcttgtcctccaggctggagagaaatag i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15608835 47 - 23502949 ttttt-------------gagacggagtctcgctc-tgtcgcccaggctggagtgcagtgg i colAng1.NW_012114488v1 C 0 C 0 e otoGar3.GL873575 10948758 311 - 12073884 I e saiBol1.JH378287 1291178 0 - 2905041 C e aotNan1.NW_018494782v1 1501485 960 - 1813869 I e cebCap1.NW_016107695v1 1249178 22 - 2164891 I e calJac3.chr4 169881291 0 + 171630274 C e dasNov3.JH569188 571122 948 + 760995 I e canFam3.chr1 56173082 6728 + 122678785 I a score=169297.000000 s hg38.chr6_KB021644v2_alt 102746 45 + 185823 tgcgatctctctcggctcaccgcaacctctgcctcccgggttcaa s panTro5.chr6 173554111 45 + 175400573 tgcgatctctctcggctcaccgcaacctctgcctcccgggttcaa i panTro5.chr6 C 0 C 0 s panPan2.chr6 171792888 45 + 173848474 tgcgatctctctcggctcaccgcaacctctgcctcccgggttcaa i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11475382 44 - 12463322 tg-gatctctctcggctcactgcaacctctgcctcccgggttcaa i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156300532 41 + 157873769 cgcaatctct----ggtcaccgcaacctctgcctccagggttcaa i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170329676 41 + 172585720 cgtgatctc----ggctcactgtaacctctgcctcccgggttcaa i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169075242 41 - 170955103 cgtgatctc----ggctcactgtaacctctgcctcccgggttcaa i macFas5.chr4 C 0 C 0 s cerAty1.NW_012002071v1 1392484 41 + 3144229 cgtgatctc----ggctcactgtaacctctgcctcccgggttcaa i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96680149 41 + 98384682 catgatctc----ggctcactgtaacctctgcctcccaggttcaa i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8216008 41 - 10857215 cgtgatctt----ggctcactgtaacctctgcctcccgggttcaa i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15608882 41 - 23502949 cgggatctc----ggctcactgcaacctctgcctcccgggttcaa i colAng1.NW_012114488v1 C 0 C 0 e otoGar3.GL873575 10948758 311 - 12073884 I e saiBol1.JH378287 1291178 0 - 2905041 C e aotNan1.NW_018494782v1 1501485 960 - 1813869 I e cebCap1.NW_016107695v1 1249178 22 - 2164891 I e calJac3.chr4 169881291 0 + 171630274 C e dasNov3.JH569188 571122 948 + 760995 I e canFam3.chr1 56173082 6728 + 122678785 I e macNem1.NW_012011000v1 8361583 46 + 10161646 I a score=740314.000000 s hg38.chr6_KB021644v2_alt 102791 141 + 185823 gtgattctcctgcctccgcctcccgagtagctggga-tta-agg-cacccaccaccat---gccctgctaatttt-tgtattttttagtaga----aacggggtttcaccatg-ttggccaggctggtttcgaactcccggcctcacgtgatc s panTro5.chr6 173554156 141 + 175400573 gtgattctcctgcctccgcctcccgagtagctggga-tta-agg-cacccaccaccat---gccctgctaatttt-tgtattttttagtaga----aacggggtttcaccatg-ttggccaggctggtttcgaactcccggcctcacgtgatc i panTro5.chr6 C 0 C 0 s panPan2.chr6 171792933 141 + 173848474 gtgattctcctgcctccgcctcccaagtagctggga-tta-agg-cacccaccaccat---gccctgctaatttt-tgtattttttagtaga----aacggggtttcaccatg-ttggccaggctggtttcgaactcccggcctcacgtgatc i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11475426 141 - 12463322 gtgattctcctgcctccgcctcctgagtagctggga-tta-agg-cacccaccaccat---ggcctgctaatttt-tgtgttttttagtaga----aacggggtttcaccatg-ttggcctggctggtttcgaactcccggcctcacgtgatc i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156300573 141 + 157873769 gtgattctcctgcctccgcctcctgagtagctgtga-tta-agg-cacccaccaccat---gcccggataatttt-tgtattttttagtaga----aacggggtttcaccatg-ttggccaggctggttttgaactcctggcctcacgtgatc i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170329717 142 + 172585720 gtgattctcctgccactgcctcccaagtagctggga-ttacagg-tgcccaccaccac---gcccagctaatttt-tgtattgtttagtaga----gacggggtttcaccacg-ttggccaggctggtttcaaactcctggcctcatgtgatc i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169075283 142 - 170955103 gtgattctcctgcctctgcctcccaagtagctggga-ttacagg-tgcccaccaccac---gcccagctaatttt-tgtattgtttagtaga----gacggggtttcaccacg-ttggccaggctggtttcaaactcctggcctcatgtgatc i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8361629 150 + 10161646 gtgat--tcctgcctctgcctcccaagtagctgggatttacaggctgcccaccaccaacgggcccaggtaattttgtatatggtttagtagaaggggacggtg-ttcaccacgcttggccaggtcggtttcaaactcctggcctcatgtgatc i macNem1.NW_012011000v1 I 46 I 37 s cerAty1.NW_012002071v1 1392525 142 + 3144229 gtgattctcctgcctctgcctcccaagtagctggga-ttacagg-tgcccaccaccac---gcccagctaatttt-tgtattgtttagtaga----gacggggtttcaccacg-ttggccaggctggtttcgaactcctggcctcatgtgatc i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96680190 142 + 98384682 gtgattctcctgcctctgccttccaagtagctggga-ttacagg-tgcccaccaccat---gcccagctaatttt-tgtattgtttagtaga----gacggggtttcaccacg-ttggccaggctggtttcgaactcctggcctcatgtgatc i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8216049 142 - 10857215 gtgattctcctgcctctgcctcccaagtagctggga-ttacagg-tgcccaccaccac---gcccagctaatttt-tgtattgtttagtaga----gacggggtttcaccacg-ttggccaggctggtttcaaactcctggcctcatgtgatc i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15608923 142 - 23502949 gtgattctcctgcctctgcctcccaagaagctggga-ttacagg-tgcccaccaccac---gcccagctaatttt-tgtattgtttagtaga----gacggggtttcaccacg-ttggccaggctgatttcgaactcctggcctcatatgatc i colAng1.NW_012114488v1 C 0 C 0 e otoGar3.GL873575 10948758 311 - 12073884 I e saiBol1.JH378287 1291178 0 - 2905041 C e aotNan1.NW_018494782v1 1501485 960 - 1813869 I e cebCap1.NW_016107695v1 1249178 22 - 2164891 I e calJac3.chr4 169881291 0 + 171630274 C e dasNov3.JH569188 571122 948 + 760995 I e canFam3.chr1 56173082 6728 + 122678785 I a score=144566.000000 s hg38.chr6_KB021644v2_alt 102932 35 + 185823 cacccacctcagcctcccaaagtgctgggatgaca s panTro5.chr6 173554297 35 + 175400573 cacccacctcagcctcccaaagtgctgggatgaca i panTro5.chr6 C 0 C 0 s panPan2.chr6 171793074 35 + 173848474 cacccacctcagcctcccaaagtgctgggatgaca i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11475567 35 - 12463322 cacccacctcagcctcccaaagtgctgggatgaca i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156300714 35 + 157873769 cgcctgcctcagtctcccaaagtgctgggattaca i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170329859 34 + 172585720 cgcccgcctcagcctcccaaagtgct-agattata i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169075425 34 - 170955103 cgcccacctcagcctcccaaagtgct-agattata i macFas5.chr4 C 0 C 0 s cerAty1.NW_012002071v1 1392667 35 + 3144229 cgcccgtttcagcctcccaaagtgctgggattaca i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96680332 34 + 98384682 cgcccgcttcagcctcccaaagtgct-agattata i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8216191 35 - 10857215 cgcccgtttcagcctcccaaagtgctgggattaca i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15609065 35 - 23502949 cgcccgcttcagcctcccaaagtgctgggattaca i colAng1.NW_012114488v1 C 0 C 0 e otoGar3.GL873575 10948758 311 - 12073884 I e saiBol1.JH378287 1291178 0 - 2905041 C e aotNan1.NW_018494782v1 1501485 960 - 1813869 I e cebCap1.NW_016107695v1 1249178 22 - 2164891 I e calJac3.chr4 169881291 0 + 171630274 C e dasNov3.JH569188 571122 948 + 760995 I e canFam3.chr1 56173082 6728 + 122678785 I e macNem1.NW_012011000v1 8361779 37 + 10161646 I a score=185305.000000 s hg38.chr6_KB021644v2_alt 102967 38 + 185823 ggcgtgag-ccac-cacgccaggccCATATCCTGCTTTTT s panTro5.chr6 173554332 38 + 175400573 gccgtgag-ccac-cacgccaggccCATATCCTGCTTTTT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171793109 38 + 173848474 ggcgtgag-ccac-cacgccaggccCATATCCTGCTTTTT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11475602 38 - 12463322 ggcgtgag-ccac-cacgccaggccCATATCATGCTTTTT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156300749 38 + 157873769 agcatgag-ccac-cacgccaggtcCATATCCTGCTTTTT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170329893 38 + 172585720 ggcatgag-ccac-cgcacccagccCATATCCTGCTTTTT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169075459 38 - 170955103 ggcatgag-ccac-cgcacccagccCATATCCTGCTTTTT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8361816 39 + 10161646 ggcatgagaccacgcacacccagccC-TATCCTGCTTTTT i macNem1.NW_012011000v1 I 37 C 0 s cerAty1.NW_012002071v1 1392702 38 + 3144229 ggtatgag-ccac-tgcgcccagccCATATCCTGCTTTTT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96680366 38 + 98384682 ggcatgag-ccac-catgcccagccCATATCCTGCTTTTT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8216226 38 - 10857215 ggtatgag-ccac-cgcgcccagccCATATCCTGCTTTTT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15609100 38 - 23502949 ggcatgag-ccac-cgcgcccagcTCATATCCCACTTTTT i colAng1.NW_012114488v1 C 0 C 0 e otoGar3.GL873575 10948758 311 - 12073884 I e saiBol1.JH378287 1291178 0 - 2905041 C e aotNan1.NW_018494782v1 1501485 960 - 1813869 I e cebCap1.NW_016107695v1 1249178 22 - 2164891 I e calJac3.chr4 169881291 0 + 171630274 C e dasNov3.JH569188 571122 948 + 760995 I e canFam3.chr1 56173082 6728 + 122678785 I a score=175162.000000 s hg38.chr6_KB021644v2_alt 103005 25 + 185823 AAAGAGCAA-TATACGTCTCCAGTTC s panTro5.chr6 173554370 25 + 175400573 AAAGAGCAA-TATGTGTCTCCAGTTC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171793147 25 + 173848474 AAAGAGCAG-TATGTGTCTCCAGTTC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11475640 25 - 12463322 AAAGAGCAA-TATGCGTCTTCAGTTC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156300787 25 + 157873769 AAAGGGCAA-TATGCGTCTCCAGTTC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170329931 25 + 172585720 AAAGAGCAA-TATGCATCTCCAGTTC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169075497 25 - 170955103 AAAGAGCAA-TATGCATCTCCAGTTC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8361855 26 + 10161646 AAAGAGCAATTATGCATCTCCAGTTC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1392740 25 + 3144229 AAAGAGCAA-TATGCATCTCCAGTTC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96680404 25 + 98384682 TAAGAGCAA-TATGCATCTCCAGTTC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8216264 25 - 10857215 AAAGAGCCA-TATGCATCTCCAGTTC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15609138 25 - 23502949 AAAGAGTAA-TATGCATCTCCAGTTC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169881291 25 + 171630274 AAACAGCAG-TGTGTGTCTCCAGTTC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1291178 25 - 2905041 AAACAGCAA-TGTGTGTCTCCAGTTC i saiBol1.JH378287 C 0 C 0 e otoGar3.GL873575 10948758 311 - 12073884 I e aotNan1.NW_018494782v1 1501485 960 - 1813869 I e cebCap1.NW_016107695v1 1249178 22 - 2164891 I e dasNov3.JH569188 571122 948 + 760995 I e canFam3.chr1 56173082 6728 + 122678785 I a score=342950.000000 s hg38.chr6_KB021644v2_alt 103030 43 + 185823 TTCTCTCAAATCTTTTACA-TCAG----TTTATCAGGAAGCCACTGAG s panTro5.chr6 173554395 43 + 175400573 TTCTCTCAAATCTTTTACA-TCGG----TTTATCAGGAAGCCACTGAG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171793172 43 + 173848474 TTCTCTCAAATCTTTTACA-TCGG----TTTATCAGGAAGCCACTGAG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11475665 43 - 12463322 TTCTCTCAAATCTTTTACA-TCGG----TTTATCAGGAAGCCACTGAG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156300812 43 + 157873769 TTCTCTCAAATCTTTTACA-TCGG----TTTATCAGGAAGCCACTGAG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170329956 44 + 172585720 TTCTCTCAAATCTTTTACATTCAG----TTTATCAGGAAGCCACTGAG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169075522 44 - 170955103 TTCTCTCAAATCTTTTACATTCAG----TTTATCAGGAAGCCACTGAG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8361881 48 + 10161646 TTCTCTCAAATCTTTTACATTCAGTTTTTTTATCAGGAAGCCACTGAG i macNem1.NW_012011000v1 C 0 I 16 s cerAty1.NW_012002071v1 1392765 44 + 3144229 TTCTCTCAAATCTTTTACATTCAG----TTTATCAGGAAGCCACTGAG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96680429 44 + 98384682 TTCTCTCAAATCTTTTACATTCAG----TTTATCAGGAAGCCACTGAG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8216289 44 - 10857215 TTCTCTCAAATCTTTTACATTCAG----TTTATCAGGAAGCCACTGAG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15609163 44 - 23502949 TTCTCTCAAATCTTTTACATTCAG----TTTATCAGGAAGCCACTGAG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169881316 44 + 171630274 TTCTCTGAAATCTTTTACATTTGG----TTGATCAGGAAGGTGCTGAG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1291203 41 - 2905041 TCTTC---AACCTTTTGCGTTCAG----TTGCTCAGGAAGGCGCTGAG i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1249200 44 - 2164891 TTCTCTTAAATCTTTTACATTCGG----TTGATCAGGAAGGTGCTGAG i cebCap1.NW_016107695v1 I 22 C 0 e otoGar3.GL873575 10948758 311 - 12073884 I e aotNan1.NW_018494782v1 1501485 960 - 1813869 I e dasNov3.JH569188 571122 948 + 760995 I e canFam3.chr1 56173082 6728 + 122678785 I a score=70904.000000 s hg38.chr6_KB021644v2_alt 103073 13 + 185823 TATCCCAGACTGG s panTro5.chr6 173554438 13 + 175400573 TATCCCAGACTGG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171793215 13 + 173848474 TATCCCAGACTGG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11475708 13 - 12463322 TATCCCAGACTGG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156300855 13 + 157873769 TATCCCAGACTGG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170330000 13 + 172585720 TATACCAAACCGG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169075566 13 - 170955103 TATACCAAACCGG i macFas5.chr4 C 0 C 0 s cerAty1.NW_012002071v1 1392809 13 + 3144229 TATACCAGACCGG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96680473 13 + 98384682 TATACCAAACCGG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8216333 13 - 10857215 TATACCAAACCGG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15609207 13 - 23502949 TATACCAGACTGG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169881360 13 + 171630274 GAGAACAGACGGG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1291244 13 - 2905041 TAGAACAGACAGG i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1249244 13 - 2164891 TAGAACAGACAGG i cebCap1.NW_016107695v1 C 0 C 0 e otoGar3.GL873575 10948758 311 - 12073884 I e aotNan1.NW_018494782v1 1501485 960 - 1813869 I e dasNov3.JH569188 571122 948 + 760995 I e canFam3.chr1 56173082 6728 + 122678785 I e macNem1.NW_012011000v1 8361929 16 + 10161646 I a score=822991.000000 s hg38.chr6_KB021644v2_alt 103086 112 + 185823 ATGGGTAG-ATCTGTACAATGGCAAACATTCACGAGATGAAGAAAACACGAACACTTCTAAGTAGACAAAGCCGTAAGGAAGTGAGCTATTTACGTAATTATGTAT-GTACAAA s panTro5.chr6 173554451 112 + 175400573 ATGGGTTG-ATCTGTACAATGGCAAACATTCATGAGATGAAGAAAACACGAACACCTCTAAGTAGACAAAGCCGTAAGGAAGTGAGCTATTTACGTAACTATGTAT-GTACAAA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171793228 112 + 173848474 ATGGGTTG-ATCTGTACAATGGCAAACATTCATGAGATGAAGAAAACATGAACACCTCTAAGTAGACAAAGCCGTAAGGAAGTGAGCTATTTATGTAACTATGTAT-GTACAAA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11475721 112 - 12463322 ATGGGTAG-ATCTGTACAATGGTAAACATTCATGAGATGAAGAAAACACGAACACCTCTAAGTAGACAAAGCCATAAGGAAGTGAGCTATTTACGTAACTATGTAT-GTACAAA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156300868 112 + 157873769 ATGGGTGG-ATCTGTACAATGGCAAACATTCATGAGATGAAGAAAACACGAACATCTCTAAGTAGACAAAGCCGTAAGGAAGTGAGCTATTTACGTAACTATATAT-GTACAAA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170330013 112 + 172585720 ATGGGTAG-ATCTGTGCAATGGCAAACATTCCTAAGGTGAAGAAAACACGAACACTTCTCAGTAGACAAAGCCATAAGGAATTGAGCTATTTACGTAATTAGGTAT-GTACAAA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169075579 112 - 170955103 ATGGGTAG-ATCTGTGCAATGGCAAACATTCCTAAGGTGAAGAAAACACGAACACTTCTCAGTAGACAAAGCCATACGGAATTGAGCTATTTACGTAATTAGGTAT-GTACAAA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8361945 113 + 10161646 ATGGGTAGCATCTGTGCAATCGCAAACGAT-CTAAGGTGAAGAAAACACGAACACTTCTCAGTAGACAAAGCCATAAGGTATTGAACTTTTAGTGTAATTAGGTATGGTACAAA i macNem1.NW_012011000v1 I 16 C 0 s cerAty1.NW_012002071v1 1392822 112 + 3144229 ATGGGTAG-ATCTGTGCAATGGCAGACATTCCTAAGGTGAAGAAAACACGAACGCTTCTCAGTAGACAAAGCCATAAGGAATTGAGCTATTTACGTAATTAGGTAT-GTACAAA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96680486 112 + 98384682 ATGGGTAG-ATCTGTGCAATGGCAAACATTCCTAAGGTGAAGAAAACACAAACACTTCTCAGTAGACAAAGCCATAAGGAATAGAGCTATTTACGTAATTATGTGT-GTACAAA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8216346 112 - 10857215 ATGGGTAG-ATCTGTGCAATGGCAAACATTCCTAAGGTGAAGAAAACACGAACACTTCTCAGCAGACAAAGCCATAAGGAATTGAGCTATTTACGTAATTAGGTGT-GTACAAA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15609220 112 - 23502949 ATGGGTAG-ATCTGTGCAATGGCAAACATTCCTAAGGTGAAGAAAACACGAACACTTCTCAGTAGACAAAACCATAAGGAATTGAGCTATTTACATAATTATGTAT-GTACAAA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169881373 111 + 171630274 ACCGGTGG-ATCTGTACGATGACAAACTTCCATGAGACGAAGAAAGCATTAGCATCTCTAAGTAAACAAAGCCATAAGTAAATGAGTTATTTATGTAACTACGTAT-GTACAG- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1291257 111 - 2905041 ATGGGCGG-ATCTGTACAATGACAAACTTTCATGAGATGAAGGAAACATTAACACCCCTAGGTCAACAAAGGCATAAGCAAACGAATTGTTTATGTAACTAGGTAT-GTACAG- i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1249257 111 - 2164891 ACCGGTGG-ATCTGTACAAAGACAAACTTTCATGAGATGAAGCAAGCATTAACACCTCTAAGTAAACAAAGCCATAAGTAAATGAGTTATTCATGTAACTACGTAT-GTACAG- i cebCap1.NW_016107695v1 C 0 C 0 e otoGar3.GL873575 10948758 311 - 12073884 I e aotNan1.NW_018494782v1 1501485 960 - 1813869 I e dasNov3.JH569188 571122 948 + 760995 I e canFam3.chr1 56173082 6728 + 122678785 I a score=860484.000000 s hg38.chr6_KB021644v2_alt 103198 99 + 185823 A--GTATACATGTAAATAAATGCC-TATATCAATGTATGTCTATGTAAATTT-GGGCAA---ATAT-ACACAT-ATGGGTGTAA-ATATAATGCT---GGAGGCAGTGCCTC s panTro5.chr6 173554563 99 + 175400573 A--GTGTACATGTAAATAAATGCC-TATATCAATGTATGTCTATGTAAATTT-GGGCAA---ATAT-ACACAT-ATGGGTGTAA-ATATAATGCT---GGAGGCAGTGCCTC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171793340 99 + 173848474 A--GTGTACATGTAAATAAATGCC-TATATCAATGTATGTCTATGTAAATTT-GGGCAA---ATAT-ACACAT-ATGGGTGTAA-ATATAATGCT---GGAGGCAGTGCCTC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11475833 99 - 12463322 A--GTGTACATGTAAATAAATGCC-TATATCAATGTATGTCTATGTAAATTT-GGGTAA---ATAT-ACACAT-ATGGGTGTAA-ATATAATGCT---GGAGGCAGTGCCTC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156300980 99 + 157873769 A--GTATACATGTAAATAAATGCC-TGTATCAATGTATGTCTATGTAAATTT-GGGCAA---ATAT-ACACAT-ATAGGTGTAA-ATATAATGCT---GGAGGCAGTGCCTC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170330125 99 + 172585720 A--GTGTACATGTAAATAAATGCC-TATATAAATGTATGTCTATGCAAATGT-GAGCAA---ATAT-ACACAT-ATAGGTGTGA-ATATAATGCT---GGAGGCAGTGCCTG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169075691 99 - 170955103 A--GTGTACATGTAAATAAATGCC-TATATAAATGTATGTCTATGCAAATGT-GAGCAA---ATAT-ACACAT-ATAGGTGTGA-ATATAATGCT---GGAGGCAGTGCCTG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8362058 108 + 10161646 AAGGCTTACATGTAAATAAATGCCGTATATAAATGTATGT-TATGCAAATGTGGAGCAA---ATATCACACATGATAGGTGTGATATATAATGCTGGGGGAGGCAGTGGCCT i macNem1.NW_012011000v1 C 0 I 13 s cerAty1.NW_012002071v1 1392934 99 + 3144229 A--GTGTACATGTAAATAAATGCC-TATATAAATGTATGTCTATGCAAATGT-GAGCAA---ATAT-ACACAG-ATAGGTGTGA-ATATAATGCT---GGAGGCAGTGCCTG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96680598 99 + 98384682 A--GTGTACATGTAAATAAATGCC-TATGTAAATATATGTCTATGCAAATTT-GAGCAA---ATGT-ACACAG-ATAGGTGTGA-ATATAATGCT---GGAGGCAGCGCCTC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8216458 99 - 10857215 A--GTGTACATGTAAATAAATGCC-TATATAAATGTATGTCTATGCAAATGT-GAGCAA---ATAT-ACACAG-ATAGGTGTGA-ATATAATGCT---GGAGGCAGTGCCTG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15609332 99 - 23502949 A--GTGTACATGTAAATAAATGCC-TATATAAATGTATGTCTATGCAAATTT-GAGCAA---ACAT-ACACAT-ATAGGTGTGA-ATATAATGCT---GGAGGCAGTGCCTC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169881484 98 + 171630274 A--GTACACACGTAAGTAAATGCC-TCTATAAATTTATGCCTGTGTACGTTT-GTGCAA---ATAG-ACACAT-ATAGGTATGA-ATATAATGCA---GGAGGCAGTG-TTC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1291368 99 - 2905041 A--GTGTACATGTAAATAAATGCC-TAGATAAATTTATGCCTGTGTAGATTT-GTGCAA---ACAG-ACACAT-ACGGGTGTGA-ATATAATGCT---GGAGGCGGTGCTTC i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1249368 102 - 2164891 A--GTATACATGTAAATAAGTGCC-TATATAAATTTATGCCTGTGTAGATTT-GTGCAAAATATAG-ACACAT-ATAGGTGTGA-ATATAATGCT---GGAGGCAGTGCTTC i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1502445 99 - 1813869 A--GTATACACGTAAATAAATGCC-TATATGAATTTGTGCCTGTGTAAATTT-GTGCAA---ACAG-ACACAT-ATAAGTGTGA-ATATAATGCT---GGAGGCAGTGCTTC i aotNan1.NW_018494782v1 I 960 C 0 e otoGar3.GL873575 10948758 311 - 12073884 I e dasNov3.JH569188 571122 948 + 760995 I e canFam3.chr1 56173082 6728 + 122678785 I a score=58441.000000 s hg38.chr6_KB021644v2_alt 103297 11 + 185823 CTTATTTACAT s panTro5.chr6 173554662 11 + 175400573 CTTATTTACAT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171793439 11 + 173848474 CTTATTTACAT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11475932 11 - 12463322 CTTATTTACAT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156301079 11 + 157873769 CTTATTTACAT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170330224 10 + 172585720 CTTA-TTACAC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169075790 10 - 170955103 CTTA-TTACAC i macFas5.chr4 C 0 C 0 s cerAty1.NW_012002071v1 1393033 10 + 3144229 CTTA-TTACAC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96680697 10 + 98384682 CTTA-TTACAC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8216557 10 - 10857215 CTTA-TTACAC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15609431 10 - 23502949 CTTA-TTACAC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169881582 11 + 171630274 CTAATTAACAC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1291467 11 - 2905041 CTAATTTACAT i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1249470 11 - 2164891 CTAATTTACAT i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1502544 11 - 1813869 CTAATTTACAT i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10948758 311 - 12073884 I e dasNov3.JH569188 571122 948 + 760995 I e canFam3.chr1 56173082 6728 + 122678785 I e macNem1.NW_012011000v1 8362166 13 + 10161646 I a score=1572380.000000 s hg38.chr6_KB021644v2_alt 103308 175 + 185823 CCATG-AAAGTGCTGTCATatagtatgacga--tgcctcaagg-atacagaaccagaaataccat-ttgacccggcaattccattactgggcatatacccaaaggaat-ctaaagcattctcctataaagacaca--tgcacacgtatgcttattgcagcactgtttacaat-agcaaagacat s panTro5.chr6 173554673 175 + 175400573 CCTTG-AAAATGCTGTCATacagtatgatga--tgcctcaaga-atccagaaccagaaatgccat-ttgacccagcaattccattactgggcacatacccaaaggaat-ctaaagcattctcctataaagacaca--tgcacacgtatgcttattgcagcactgtttacaat-agcaaggacat i panTro5.chr6 C 0 C 0 s panPan2.chr6 171793450 175 + 173848474 CCTTG-AAAATGCTGTCATacagtatgatga--tgcctcaaga-atccagaaccagaaatgccat-ttgacccggcaattccattactgggcacatacccaaaggaat-ctaaagcattctcctataaagacaca--tgcacacgtatgcttattgcagcactgtttacaat-agcaaggacat i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11475943 174 - 12463322 CTGTG-AAAGTGCTGTCATACAA-atgacga--tgcctcaagg-atacagaaccagaaataccat-ttgacccggcaattccattactgggcatatacccaaaggaat-ctaaagcattctcctataaagacaca--tgcacacgtatgcttattgcagcactgtttacaat-agcaaggacac i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156301090 175 + 157873769 CCATG-AAAATGCTGTCATacagtatgacga--tgcctcaagg-atctagaaccagaaataccat-ttgacccagcaattccattactgggcatatacccaaaggaat-ctaaagcattctactataaagacaca--tgcacacgtatgcttattgcagcactatttacaat-agcaaagacat i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170330234 175 + 172585720 CCGTG-AAAATGCTGTCagacagtatggcga--tgcctcaagg-atctagaaccagaaataccat-tggacccggcaatcccattactgggtatatacccaaaggaat-ataaatcattctactataaagacaca--tgcacatgtatgtttattgcagcactatttacaat-agcaaagacac i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169075800 175 - 170955103 CCGTG-AAAATGCTGTCagacagtatggcga--tgcctcaagg-atctagaaccagaaataccat-tggacccggcaatcccattactgggtatatacccaaaggaat-ataaatcattctactataaagacaca--tgcacatgtatgtttattgcagcactatttacaat-agcaaagacac i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8362179 181 + 10161646 CCATGAAAAATGCTGTCagacagt-tggcgaactgcctcaaggcatctagaaccagaaataccatgtggaccggcaaattccattactgggtatatacccaaaggaataataaatcatt-tactgataagacacaatggcacatgtatgtttattgc-gcactatttacaataagcaaagacac i macNem1.NW_012011000v1 I 13 C 0 s cerAty1.NW_012002071v1 1393043 175 + 3144229 CCGTG-AAAATGCTGTCagacagtatggcga--tgtctcaagg-atctagaaccagaaataccat-tggacccggcaatcccattactgggtatatacccaaaggaat-ataaatcattctactataaagacaca--tgcacatgtatgtttattgcagcactatttacaac-agcaaagacac i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96680707 175 + 98384682 CCGTG-AAAATGCTGTCagacagtatggcga--tgcctcaagg-atctagaaccagaaataccat-ttgaaccagcaatcccattactgggtatatacccaaaggaat-ataaagctttctactataaagacaca--tgcacatgtatgtttattgcagcactatttacaat-agcaaagacac i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8216567 175 - 10857215 CCGTG-AAAATGCTGTCagacagtatggcga--tgcctcaagg-atctagaaccagaaataccat-tggacccggcaatcccattactgggtatacacccaaaggaat-ataaatcattctactataaagacaca--tgcacacgtatgtttattgcagcactattcacaat-agcaaagacac i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15609441 175 - 23502949 CCGTG-AAAATGCTGTCagacagtgtggcga--tgcctcaagg-atctagaaccagaaataccat-ttgaaccagcaatcccattactaggtatatacccaaaggaat-ataaatcattctactataaagacaca--tgcacacgtatgtttattgcagcactattcacaat-agcaaagatgc i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169881593 175 + 171630274 CCTTG-AAAattctgtaacagagtagagcga--cgcctcaagg-atcgagaaccagaaataccat-ttgatttggcaattccatcactgggtacatccccaaaggaaa-ataaatcattctactataaagacaca--tgcacgtgtatgtttatttcagcactgtttacaat-agcaaagacat i calJac3.chr4 C 0 I 1108 s saiBol1.JH378287 1291478 175 - 2905041 CCTTG-AAcattctgtaatacagtatggcga--tgcctcaagg-atctagaaccagaaataccat-ttgatttggcaattccgtcactgggtacatccccaaaggaaa-ataaatcattctactataaagacaca--tgcccatgtatgtttatttcagcactatttacaat-agcaaagacat i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1249481 175 - 2164891 CCTTG-AAAattctgtaatacagtatggcga--tgcctcaagg-atctagaaccagaaataccat-ttgatttggcaattccgtcactgggtacatccccaaaggaaa-acaaatcattatactataaagacaca--tgcacatgtatgtttatttcagcactatttacaat-ggcaaagacat i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1502555 175 - 1813869 CCTTG-AAAattctgtaacacggtatggtga--tgcctcaagg-atctagaaccagaaataccat-ttgatttggcaattccatcactgggtacatccccaaaggaaa-ataaaccattctactataaagacaca--tgcacatgtatgtttatttcagcactatttacaat-ggcaaagacat i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10948758 311 - 12073884 I e dasNov3.JH569188 571122 948 + 760995 I e canFam3.chr1 56173082 6728 + 122678785 I a score=3290816.000000 s hg38.chr6_KB021644v2_alt 103483 360 + 185823 agaacctacccaaaggcccatcaatgatagactagataaagaaaatgtggtacatatacaccatgggatactatgcagccataaaaaggg-taagttcacgtcctttacagggacatggatggagctggaagtcatcatcctcagcaaactaacacaggaacagaaaaccaaacaccgcatgttctcactcatgagtgggagctgaacattgagaacacatggacac-a-gggaggggaacatcacacaccagggcctgttggaaggtg--gggtgaggagagggaac-----ggacgggtcagtaggtgcagcaaaccaccatggcatacatgtacctatgtaagaaacctgcacgttctgcacatgta s panTro5.chr6 173554848 360 + 175400573 agaacctacccacatgcccatcaatgatagactagataaagaaaatgtggtacatatacaccatgggatactatgcagccataaaaaggg-taagttcacgtcctttacagggacatggatggagctggaagtcatcatcctcagcaaactaacacaggaacagaaaaccaaacaccacatgttctcactcatgagtgggagctgaacattgagaacacatggacac-a-aggaggggaacatcacacaccagggcctgttggaaggtg--gggtgaggagagggaac-----ggacgggtcagtaggtgcagcaaaccaccacggcacacatgtacctatgtaagaaacctgcacattctgcacatgta i panTro5.chr6 C 0 C 0 s panPan2.chr6 171793625 360 + 173848474 agaacctacccacatgcccatcaatgatagactagataaagaaaatgtggtacatatacaccatgggatactatgcagccataaaaaggg-taagttcacgtcctttacagggacatggatggagctggaagtcatcatcctcagcaaactaacacaggaacagaaaagcaaacaccacatgttctcactcatgagtgggagctgaacattgagaacacatggacac-a-aggaggggaacatcacacaccagggcctgttggaaggtg--gggtgaggagagggaac-----ggacgggtcagtaggtgcagcaaaccaccacggcacacatgtacctatgtaagaaacctgcacattctgcacatgta i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11476117 359 - 12463322 agaacctacccaaatgccca-caatgatagactagataaagaaaatgtgggacatatacaccatgggatactatgcagccgtaaaaaggg-taagttcacgtcctttacagggacatggatggagctggaagtcatcatcctcagcaaactaacacaggaacagaaaaccaaacaccacatgttctcactcatgagtgggagctgaacactgagaacacatggacac-a-gggaggggaacatcacacaccagggcctgttggaaggcg--gggtgaggagagggaac-----ggacaggtcagtaggtgcagcaaaccaccatggcacacgtgttcctatgtaagaagcctgcacgttctgcacatgta i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156301265 367 + 157873769 agaacctacccaaatgcccatcaatgataggctggataaagaaaatgtggtacatatacaccatggaacactatgcagccataaaaagggataagttcacatcctttgcagggacatggatgaagctggaagtcatcatcctcagcaaactaacataggaacagaaaaccaaacatcgcatgttctcactcatgagtgggagctgaacattgagaacacctggacac-aggggaggggaacgtcacacaccacggcctgttggaaggta--gggtgaggagagggaacttagaggacgggtcagtaggtgcagcaaaccaccatggcacacttgtacctatgtaaggaacctgcacgttctgcacatgta i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170330409 368 + 172585720 agaacctacccaaatgcccatcaatgatagactggataaagaaaatgtggcacatatacaccatggaatactatgcagccataaaaagaaatgagttcgtgtcctttgcagggtcatggatgaagctagaagtcatcatcctcagcaaactaacacaggaacagaaaaccaaacactgcatcttctcacttatgagtgggagctaaacattgagaacacatagacac-a-gagagtggaacaatacacatcacagcctattggggggtggggggtgagggcagggaacttagagaacgagtcagtaggtgcagcaaaccaccatggcacacgtatacctatgtaagaaacctgcatgttctgcacatgta i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169075975 368 - 170955103 agaacctacccaaatgcccatcaatgatagactggataaagaaaatgtggcacatatacaccatggaatactttgcagccataaaaagaaatgagttcgtgtcctttgcagggtcatggatgaagctagaagtcatcatcctcagcaaactaacacaggaacagaaaaccaaacactgcatcttctcacttatgagtgggagctaaacattgagaacacatagacac-a-gagagtggaacaatacacatcacagcctattggggggtggggggtgagggcagggaacttagagaacgagtcagtaggtgcagcaaaccaccatggcacacgtatacctatgtaagaaacctgcacattctgcacatgta i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8362360 368 + 10161646 agaacctacccaaatgcccatcaatgatagactggataaagaaaatgtggcacatatacaccatggaatactatgcagccataaaaagaaatgagttcgtgtcctttgcagggtcatggatgaagctagaagtcatcatcctcagcaaactaacacaggaacagaaaaccaaacactgcatcttctcacttatgagtgggagctaaacattgagaacacatagacac-a-gagagtggaacaatacacatcacagcctattggggggtggggggtgagggcagggaacttagagaacgagtcagtaggtgcagcaaaccaccatggcacacgtatacctatgtaagaaacctgcacgttctgcacatgta i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1393218 368 + 3144229 agaacctacccaaatgcccatcaatgatagactggatgaagaaaatgtggcacagatacaccatggaatactatgcagccataaaaaggaatgagttcgtgtcctttgcagggtcatggatgaagctggaagtcatcatcctcagcaaactaacgcaggaacagaaaaccaaacactgcatgttctcactcatgagtgggagctaaacattgagaacacatagacac-a-gagagtggaaccacacacatcagggcctattagggggtggagggtgagggcagggaacttagagaacgagtcagtaggtgcagcaaaccaccatggcacgtgtatacctatgtaagaaacctgcacgttctgcacgtgta i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96680882 364 + 98384682 agaacctacccaaatgcccatcaatgatagactgaataaagaaaatgtggcacatatacaccatggaatactatgcagccataaaaaggaatgagttcgtgtcctttgcagggtcatggatgaagctggaagtcatcatcctcagcaaactaacacaggaacagaaaaccaaacactgcatgttctcactcatgagtgggagctaaacattgagaacacatagacac-a-gagagcggaacaacacacatcagggcctattgggg---gtggggtgggggcagggaacttagagaacgagtcagtaggtgcagcaaaccaccatagcacatgtatacctatgtaagaaacctgcacgttctgcacatt-a i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8216742 367 - 10857215 agaacctacccaaatgcccatcaatgacagaccggataaagaaaatgtggcacatatacaccatggaatactatgcagccataaaaaggaatgagttcgtgtcctttgcaggatcatggatgaagctggaagtcatcatcctcagcaaactaacgcaggaacagaaaaccgaacactgcatgtcctcactcatgagtgggagctaaacattgagaacacatagacac-a-gagagtggaacaacacccatcagggcctattggggggtggggggtgagggcagggaacttagagaacgagtcagtaggtgcagcaaaccaccatggcacatgtatacctatgtaagaaacctgcacgttctgcacgtg-t i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15609616 367 - 23502949 agaacttacccaaatgcccatcaatgatagactggataaagaaaatgtggcacatatacaccatggaatactaagcagccataaaaaggaatgagttagtgtcctttgcagggacatggatgaagcgggaagtcatcatcctcagcaaactaacacaggaacagaaaaccaaacaccgcatgttctcactcatgagtgggagctgagcattgagaacacatggacac-a-gagaggggaacatcacacatcagggcctattggggggtggggggtga-ggcagggaacttagagaacgaatcagtaggtgcagcaaaccaccatggcacacatatacctgtgtaagaaacctgcacgttctgcacatgta i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169882876 367 + 171630274 ggaaccaacccaaaaccccatcagttgtagactggataaagaaaatgtggtacatacacaccatagaatactatgcagctataaaaaagaatgagatcatgtcctttgcagggacatggatgaggctggaagccattatcctcagcaagctaacacaggcacagtaaaccaaacacctcatgttctcactcataagtgggagttgaacaatgagaacacagcgactt-a-gggaggggaacatcacataccaggatctgttgg-gggtggggggtgaagggagggaacttagaggatgggtcagtaggtgcagcaaaccaccacggcacacatatacctatgtaatgaacctgcacgttctgcacgtgtg i calJac3.chr4 I 1108 C 0 s saiBol1.JH378287 1291653 363 - 2905041 ggaaccaacccaaatccctattagttgtagactggataaagaaaatgtggtacatacacaccatgaaatactatgcagccataaaaaggaatgagatcatgtcctttgcaggaacatggatggagctggaagccattatcctcagcaaactaacgaaggaacagaaaaccaaacacgtcatgttctcactcataaataggaggtgaacgatgagaacacagggacac-a-ggga-gggaacatcacacaccagggcctgttgg-gggtggggggtgaggggaggg-actcagaggatgggtcagtaggtacagcaaacgaccacagcacacgtatgcctatgtaacgagcatgcacggtctgcac--gtg i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1249656 359 - 2164891 ggaaccaacccaaattcccatcagctgtagactggataaagaaaatgtggtacatacataccatggaatactatgcagccataaaaaggagtgagatcatgtcctttgcagggacatggatgaagctggaagtcattattctcagcaaactaacacaggaacagaaaaccaaacacctcatgttctcactcataagtgggagttgaacaatgagaacacagggacac-a-gggaggggaacatcacataccagggcctgtt---------ggggtgaggggagggagcttagaggatgggtcagtaggtacagcaaaccatcacagtacacgtatacctatgtaatgaacctgcacgttctgcacgtgtg i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1502730 366 - 1813869 ggaaccaatccaaatccccatcagttgtagattggataaagaaaatgtggtgcacacacaccatggaaaaatatgcagccataaaaaggaatgagatcatgttctttacagggacatggatgaagctggaagccattatcctcagcaaactaacacaggaacagaaaaccaaacacctcacgt--tcactcataagtgggagctgaacatggagaacacatggacataa-gagaggggaacaacacacaccagggcctactgg-ggttggggggtgaggggagggaacttagaggatgggtcagtaagtgcagcagaccaccgcggcacatgtatacctatgtaacaaacctgcacgttctgcacatgtg i aotNan1.NW_018494782v1 C 0 I 25 e otoGar3.GL873575 10948758 311 - 12073884 I e dasNov3.JH569188 571122 948 + 760995 I e canFam3.chr1 56173082 6728 + 122678785 I a score=40948.000000 s hg38.chr6_KB021644v2_alt 103843 17 + 185823 tcctg---tttttttttttt s panTro5.chr6 173555208 20 + 175400573 tcctgttttttttttttttt i panTro5.chr6 C 0 C 0 s panPan2.chr6 171793985 16 + 173848474 tcctg----ttttttttttt i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11476476 16 - 12463322 tcctg----tttttttcttt i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156301632 20 + 157873769 tcctgttttttTTTTTTTTT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170330777 16 + 172585720 ccctg----tttgttTGTTT i rheMac8.chr4 C 0 I 15 s macFas5.chr4 169076343 16 - 170955103 ccctg----tttgttTGTTT i macFas5.chr4 C 0 I 15 s macNem1.NW_012011000v1 8362728 16 + 10161646 ccctg----tttgttTGTTT i macNem1.NW_012011000v1 C 0 I 15 s cerAty1.NW_012002071v1 1393586 16 + 3144229 ccctg----ttttttTGTTT i cerAty1.NW_012002071v1 C 0 I 15 s chlSab2.chr13 96681246 16 + 98384682 ccctg----ttttttTGTTT i chlSab2.chr13 C 0 I 20 s manLeu1.NW_012106474v1 8217109 10 - 10857215 acctt----ttttt------ i manLeu1.NW_012106474v1 C 0 I 7 s colAng1.NW_012114488v1 15609983 16 - 23502949 ccctg----tttttttgttt i colAng1.NW_012114488v1 C 0 I 55 s calJac3.chr4 169883243 12 + 171630274 tgctg----tatcttt---- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1292016 12 - 2905041 tgctg----tattttt---- i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1250015 11 - 2164891 tgctg----cat-ttt---- i cebCap1.NW_016107695v1 C 0 C 0 e otoGar3.GL873575 10948758 311 - 12073884 I e aotNan1.NW_018494782v1 1503096 25 - 1813869 I e dasNov3.JH569188 571122 948 + 760995 I e canFam3.chr1 56173082 6728 + 122678785 I a score=65063.000000 s hg38.chr6_KB021644v2_alt 103860 16 + 185823 ttagaagaaa--tttttt s panTro5.chr6 173555228 17 + 175400573 ttagaagaaa-ttttttt i panTro5.chr6 C 0 C 0 s panPan2.chr6 171794001 16 + 173848474 ttagaataaa--tttttt i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11476492 16 - 12463322 ttagaagaaa--tttaaa i gorGor5.CYUI01015032v1 C 0 I 1 s nomLeu3.chr3 156301652 18 + 157873769 TTTGAAGAAAGTTTTTTT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170330808 16 + 172585720 TTAGAAGAAA--TCAAAC i rheMac8.chr4 I 15 C 0 s macFas5.chr4 169076374 16 - 170955103 TTAGAAGAAA--TCAAAC i macFas5.chr4 I 15 C 0 s macNem1.NW_012011000v1 8362759 16 + 10161646 TTAGAAGAAA--TCAAAC i macNem1.NW_012011000v1 I 15 C 0 s cerAty1.NW_012002071v1 1393617 16 + 3144229 TTAGAAGAAA--TCAAAC i cerAty1.NW_012002071v1 I 15 C 0 s chlSab2.chr13 96681282 16 + 98384682 TTGGAAGAAA--TCAAAC i chlSab2.chr13 I 20 C 0 s manLeu1.NW_012106474v1 8217126 16 - 10857215 ttagaagaaa--tcaaac i manLeu1.NW_012106474v1 I 7 C 0 s calJac3.chr4 169883255 13 + 171630274 ttagaagaaa--tt---t i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1292028 16 - 2905041 ttagaagaaa--ttaaaa i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1250026 16 - 2164891 ttagaagaaa--tTTTTT i cebCap1.NW_016107695v1 C 0 C 0 e otoGar3.GL873575 10948758 311 - 12073884 I e aotNan1.NW_018494782v1 1503096 25 - 1813869 I e dasNov3.JH569188 571122 948 + 760995 I e colAng1.NW_012114488v1 15609999 55 - 23502949 I e canFam3.chr1 56173082 6728 + 122678785 I a score=21385.000000 s hg38.chr6_KB021644v2_alt 103876 4 + 185823 aaaa s panTro5.chr6 173555245 4 + 175400573 aaaa i panTro5.chr6 C 0 C 0 s panPan2.chr6 171794017 3 + 173848474 -aaa i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11476509 4 - 12463322 aaaa i gorGor5.CYUI01015032v1 I 1 C 0 s nomLeu3.chr3 156301670 4 + 157873769 TAAA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170330824 4 + 172585720 AAAA i rheMac8.chr4 C 0 I 1 s macFas5.chr4 169076390 4 - 170955103 AAAA i macFas5.chr4 C 0 I 1 s macNem1.NW_012011000v1 8362775 4 + 10161646 AAAA i macNem1.NW_012011000v1 C 0 I 1 s cerAty1.NW_012002071v1 1393633 4 + 3144229 AAAA i cerAty1.NW_012002071v1 C 0 I 1 s chlSab2.chr13 96681298 4 + 98384682 AAAA i chlSab2.chr13 C 0 I 1 s manLeu1.NW_012106474v1 8217142 4 - 10857215 aaaa i manLeu1.NW_012106474v1 C 0 I 1 s calJac3.chr4 169883268 2 + 171630274 --aa i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1292044 2 - 2905041 --aa i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1250042 2 - 2164891 --TA i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1503121 4 - 1813869 aaaa i aotNan1.NW_018494782v1 I 25 C 0 e otoGar3.GL873575 10948758 311 - 12073884 I e dasNov3.JH569188 571122 948 + 760995 I e colAng1.NW_012114488v1 15609999 55 - 23502949 I e canFam3.chr1 56173082 6728 + 122678785 I a score=915123.000000 s hg38.chr6_KB021644v2_alt 103880 117 + 185823 aaagaaaGGAAAATGCTGTCATCGATGAGAATAGAAGCCCCAGAGTCTCTGTTTTCCTAACAGAGGGACTGTTTGCACTGTGGGTGCGATAGAACAGCTCCTGCCCTG-TAACTCAGT s panTro5.chr6 173555249 117 + 175400573 aaagaaaGGAAAATGCTGTCATCGATGAGAATAGAAGCCCCAGAGTCTCTGTTTTCCTAACAGAGGGACTGTTTGCACTGTGGGTGTGATAGAGCAGCTCCTGGCCTG-TAACTCAGT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171794020 117 + 173848474 aaagaaaGGAAAATGCTGTCATCGATGAGATTAGAAGCCCCAGAGTCTCTGTTTTCCTAACAGAGGGACTGTTTGCACTGTGGGTGCGATAGAGCAGCTCCTGGCCTG-TAACTCAGT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11476513 117 - 12463322 aaAGAAAGGAAAATGCTGTCATCGATGAGAATAGAAGCCCCAGAGTCTCTGTTTTCCTAACAGAGGGACTGTTTGCACTGTGGGTGCGATAGAGCAGCTCCTGCCCTG-TAACTCAGT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156301674 110 + 157873769 AAAGAAAGGAAAATGCTGTCATCAATGGGAATAGAAGCCCCAAAGGCTCTGTTTTCCTAA-------AACGTTTGCACTATGGGTGCGATAGAGCAGCTCCTGCCCTG-TAACTCAGT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170330829 108 + 172585720 AAAGAAAGGAAAATG-TGTCATCCGTCAGAATAGAAGCCTCAAAGGCTCTATTTTCCTA--------AGCGTTTGCACTGTGGGTGTGATAGAGCAGCTCCTGCACTG-TAACTCGGT i rheMac8.chr4 I 1 C 0 s macFas5.chr4 169076395 108 - 170955103 AAAGAAAGAAAAATG-TGTCATCCGTCAGAATAGAAGCCTCGAAGGCTCTATTTTCCTA--------AGCGTTTGCACTGTGGGTGTGATAGAGCAGCTCCTGCACTG-TAACTCGGT i macFas5.chr4 I 1 C 0 s macNem1.NW_012011000v1 8362780 108 + 10161646 AAAGAAAGGAAAATG-TGTCATCCGTCAGAATAGAAGCCTCAAAGGCTCTATTTTCCTA--------AGCGTTTGCACTGTGGGTGTGATAGAGCAGCTCCTGCACTG-TAACTCGGT i macNem1.NW_012011000v1 I 1 C 0 s cerAty1.NW_012002071v1 1393638 108 + 3144229 AAAGAAAGGAAAATG-TGTCATCCGTCAGAATAGAAGCCTCAAAGGCTCTCTTGTCCTA--------AGCATTTGCACTGTGGGTGTGATGGAGCAGCTCCTGCACTG-TAACTCGGT i cerAty1.NW_012002071v1 I 1 C 0 s chlSab2.chr13 96681303 109 + 98384682 AAAGAAAGGAAAATGCTGTCATCCATCAGAACAGAAGCCTCAAAGCCTCTCTTTTCCTA--------AGCGTTTGCACTGTGGGTGTGATAGAGCAGCTCCTGCACTG-TAACTCGGT i chlSab2.chr13 I 1 C 0 s manLeu1.NW_012106474v1 8217147 109 - 10857215 aaAGAAAGGAAAATGCTGTCATCCATCAGAATACAAGCCTCAAAGGCTCTCTTTTCCTA--------AGTATTTGCACTGTGGGTGTGATAGAGCAGCTCCTGCACTG-TAACTTGGT i manLeu1.NW_012106474v1 I 1 C 0 s colAng1.NW_012114488v1 15610054 109 - 23502949 AAAGAAAGGAAAATGCTGTCATCCATCAGAATAGAAGCCTCAAAGGCTCTCTTTTCCTA--------AGCGTTTGCACTGTGGGTGTGATAGAGCAGCTCCTGCGCTG-TAACTCGGT i colAng1.NW_012114488v1 I 55 C 0 s calJac3.chr4 169883270 110 + 171630274 aaaaaaaGAAAAATGCTGTCATCCATCAGAATAGAAGCCCCAAAGGCCCCATCTTCCTC--------AACATTTGCACTGTAGGTGCAACAGAGTAGCTCCCACACTGATAACTCGGA i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1292046 110 - 2905041 aaaaaAAGGAAAATGCCATCATCCATCAGAATAGAAGCCCCAAAGGCCCCATCTTCCTA--------AACATTTGCACTGTGGGTGTGACAGGGCAGCTCCTGCACTGATAACTCGGA i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1250044 108 - 2164891 AAAAAAGG--AAATGAAGTCATACATCAGAATAGAAGCCACAAAGGCCCCATCTTCCTA--------AACGTTTGCATTGTGGATGTGACAGAGCAGCTCCTGCACTGATAACTCGGA i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1503125 110 - 1813869 aaaaAAGGGAAAATGCTGTCATCCATCAGAATAGAAGCCCCAAAGGCCCCATCTTCCTA--------AACATTTGCACTGTGGGTGCGACAGAGCAGCTCCTGCACTGGTAACGTGGA i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10948758 311 - 12073884 I e dasNov3.JH569188 571122 948 + 760995 I e canFam3.chr1 56173082 6728 + 122678785 I a score=150809.000000 s hg38.chr6_KB021644v2_alt 103997 24 + 185823 GCTTGGGACTCTTGGCATCAT-------------------GAG------------------- s panPan2.chr6 171794137 24 + 173848474 GCTTGGGACTCTTGGCATCAT-------------------GAG------------------- i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11476630 24 - 12463322 CCTTGGGACTCTTGGCATCAT-------------------GAG------------------- i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156301784 43 + 157873769 CCTTGGGACTCTTGGCATCATGAGTCAGATGCAACTTTAAGAG------------------- i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170330937 24 + 172585720 CCTTGGGACTCTTGGCATCAT-------------------GAG------------------- i rheMac8.chr4 C 0 I 19 s macFas5.chr4 169076503 24 - 170955103 CCTTGGGACTCTTGGCATCAT-------------------GAG------------------- i macFas5.chr4 C 0 I 19 s macNem1.NW_012011000v1 8362888 24 + 10161646 CCTTGGGACTCTTGGCATCAT-------------------GAG------------------- i macNem1.NW_012011000v1 C 0 I 19 s cerAty1.NW_012002071v1 1393746 24 + 3144229 CCTTGGGATTCTTGGCATCAT-------------------GAG------------------- i cerAty1.NW_012002071v1 C 0 I 19 s chlSab2.chr13 96681412 24 + 98384682 CCTTGGGACTCTTGGCATCAT-------------------GAG------------------- i chlSab2.chr13 C 0 I 19 s manLeu1.NW_012106474v1 8217256 22 - 10857215 CCTTTGGACTCC--GCATCAT-------------------GAG------------------- i manLeu1.NW_012106474v1 C 0 I 19 s colAng1.NW_012114488v1 15610163 24 - 23502949 CCTTGGGACTCTTGGCATCAT-------------------GAG------------------- i colAng1.NW_012114488v1 C 0 I 36 s calJac3.chr4 169883380 43 + 171630274 ACTTTGGACTCTTGGCGTCAT-------------------GAGGCAGATGCAAGTTTACGAG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1292156 43 - 2905041 CCTCTGGACTCTTGGTGTCAT-------------------AAGGCAGATGCGGCTTTACGAG i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1250152 43 - 2164891 CCTTTGGACTCTTGGCATCAT-------------------GAGGCAGATGCAACTTTATGAG i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1503235 43 - 1813869 CCTTCGGACTCTTGGTGTCAT-------------------GAGGCAGATGCAACTTTACGAG i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10948758 311 - 12073884 I e dasNov3.JH569188 571122 948 + 760995 I e canFam3.chr1 56173082 6728 + 122678785 I e panTro5.chr6 173555366 0 + 175400573 C a score=74224.000000 s hg38.chr6_KB021644v2_alt 104021 18 + 185823 ATGCCCTGAATTACTGGG- s panPan2.chr6 171794161 18 + 173848474 ATGCCCTGAATTACTGGG- i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11476654 18 - 12463322 ATGCCCTGAATCACTGGG- i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156301827 18 + 157873769 AAGCCCTGAATCACTGGG- i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170330980 17 + 172585720 AAGCCCTGAATTGCTCG-- i rheMac8.chr4 I 19 C 0 s macFas5.chr4 169076546 17 - 170955103 AAGCCCTGAATTGCTCG-- i macFas5.chr4 I 19 C 0 s macNem1.NW_012011000v1 8362931 17 + 10161646 AAGCCCTGAATTGCTCG-- i macNem1.NW_012011000v1 I 19 C 0 s cerAty1.NW_012002071v1 1393789 17 + 3144229 AAGCCCTGAATTGCTCG-- i cerAty1.NW_012002071v1 I 19 C 0 s chlSab2.chr13 96681455 17 + 98384682 AAGCCCTGAATTGCTCG-- i chlSab2.chr13 I 19 C 0 s manLeu1.NW_012106474v1 8217297 17 - 10857215 AAGCCCTGAATTGCTCG-- i manLeu1.NW_012106474v1 I 19 C 0 s calJac3.chr4 169883423 17 + 171630274 AAGCCC-GAATCACTGG-C i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1292199 18 - 2905041 AAGCCCTAAATCACTGG-G i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1250195 18 - 2164891 AAGCCCTAAATCACTGG-G i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1503278 18 - 1813869 AAGCCCTGAATCACTGG-G i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10948758 311 - 12073884 I e dasNov3.JH569188 571122 948 + 760995 I e colAng1.NW_012114488v1 15610187 36 - 23502949 I e canFam3.chr1 56173082 6728 + 122678785 I e panTro5.chr6 173555366 0 + 175400573 C a score=1905447.000000 s hg38.chr6_KB021644v2_alt 104039 257 + 185823 ATCATCCAAGTCTCCCTAGAAACTGTGTGGAAAC--ATAGGTCACAGGCGCTTCTGTGTGTCTTATAAAGACAAGGCTGCTCCAGCAGgtaagctgaaagtcacgtcctaagccccc-aacagtctgaatgggctccttgtctcagtgaaaggcattctgaagttaacctgaaaatctagcttaggccacgatgggaagt-gggaggtgtcagacgggcctccttatac------cc-tcctccctttggagttcagacacaactgac s panPan2.chr6 171794179 258 + 173848474 ATCATCAAAGTCTCCCTAGAAACTGTGTGGAAAC--ATAGGTCACAGGCGCTTCTGTGTGTCTTATAAAGACAAGGCTGCTCCAGCAGTtaagctgaaagtcacgtcctaagccccccaacaatctgaacgggctccttgtctcagtgaaaggccttctgaagttaacctgaaaatctagcttaggccacgatgggaagt-gggaggtgtcagacgggcctccttatac------cc-tcctccctttggagttcagacacaactgac i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11476672 257 - 12463322 ATCATCCAAGTCTCCCTAGAAACTGTGTGGAAGC--ATAGCTCACAGGCGCTTCTGTGTGTCTTATGAAGACAAGGCTGCTCCAGCAGgtaagctgaaagtcacatcctaagccccc-agcaatctgaatgggctccttgtctcagtgaaaggcattctgaagttaacctgaaaatctagcttaggccacgatgggaagt-gggaggtgtcagacgggcctccttatac------cc-acctccctttggagttcagacacaactgac i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156301845 258 + 157873769 ATCATCCACGTCTCCCTAGAAACTGTGTGGAAAC--ATAGGTCACAGGTGCTTCTGTGTGTCTTATAAAGACAAGGCTGCCCCAGCAtgtaagctgaaagtcacattctacgccccgcaacaatccgaatgggctccttgtctcagtgaaaggcattctgaagttaacctgaaaatctagcttaggccacgatgggaagt-gggaggtgtcagatgggcctccttatac------cc-ccctccctttggagttcagacacaactgac i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170330997 260 + 172585720 ATGATCCAAGTCTCCCTGGAAACTGTGTGGAAACACATAGGGCACAGAGGCTTCCGTGCGTCTTATAAAGACAAGGCTGCTCCACCAtgtaagctgaaagtcacattctaaacctcccaacaatctgaatgggctcctcgtctcagtgaaaggcattctgaagttaagctgaaaattgagcttaggccatggtgggaagt-ggggggtgtcagacgggtctccttatac------cc-ccctccctttggagttcaggcacaactgac i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169076563 260 - 170955103 ATGATCCAAGTCTCCCTGGAAACTGTGTGGAAACACATAGGGCACAGAGGCTTCCGTGCGTCTTATAAAGACAAGGCTGCTCCACCAtgtaagctgaaagtcacattctaaacctcccaacaatctgaatgggctcctcgtctcagtgaaaggcattctgaagttaagctgaaaattgagcttaggccatggtgggaagt-ggggggtgtcagacgggtctccttatac------cc-ccctccctttggagttcaggcacaactgac i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8362948 260 + 10161646 ATGATCCAAGTCTCCCTGGAAACTGTGTGGAAACATATAGGGCACAGAGGCTTCCGTGCGTCTTATAAAGACAAGGCTGCTCCACCAtgtaagctgaaagtcacattctaaacctcccaacaatctgaatgggctcctcgtctcagtgaaaggcattctgaagttaagctgaaaattgagcttaggccatggtgggaagt-ggggggtgtcagacgggtctccttatac------cc-ccctccctttggagttcaggcacaactgac i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1393806 260 + 3144229 ATGATCCAAGTCTCCCTGGAAACTGTGTGGAAACATATAGGGCACAGACGCTTCCGTGCGTCTTATAAAGACAAGGCTGCTCCACCAGgtaagctgaaagtcacattctaaaccccccaacaatctgaatgggctcctcgtctcagtgaaaggcattctgaagttaagctgaaaattgagcttaggccacggtgggaagt-ggggggtgtcagacgggtctccttatac------cc-ccctccctttggagttcagacacaactgac i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96681472 260 + 98384682 ATGATCCAAGTCTCCCCGGAAACTGTGTGGAAACATATAGGGCACAGACGCTTCCATATGTCTTATAAAGACAAGGCTGCTCTACCAtgtaagctgaaagtcacattctgaaccccccaacaatctgaatgggctcctcgtctcagtgaaaggcattctgaagttaagctgaaaattgagcttaggtcacggtgggaagt-ggggggtgccagacgggtctccttatac------cc-ccctccctttggagttcagacacaactgac i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8217314 261 - 10857215 ATGATCCAAGTCTCCCTGGAAACTGTGTGGAAACATATAGGGCACAGACGCTTCCGTGCGTCTTATAAAGACAAGGCTGCTCCACCAGgtaagctaaaagtcacattctaaaccccccaacaatctgaatgggctcctcgtctcagtgaaaggcattctgaagttaagctgataattgagcttaggccacggtgggaagt-agggggtgttagacaggtctccttatac------ccgccctccctttggagttcagacacaactgac i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15610223 261 - 23502949 ATGATCCAAGTCTCCCTGGAAACTGTGTGGAAACACATACAGCACAGACGCTTCCGTGTGTCTTACAAAGACAAGGCTACTCCACCGtgtaagctgaaagccacattctaaaccccccaacaatctgaacgggctcctcgtcccagtgaaaggcattctgaagttaagctggaaatcgagcttaggccacggtgggaagtgggggggtgtcagacgggcctccttatac------cc-tcctccctttggagttcagacataactgac i colAng1.NW_012114488v1 I 36 C 0 s calJac3.chr4 169883440 250 + 171630274 ATTATCCAAGTCTCCCTGGAAACTGTGGAGACAC--CTAGG-CGCAGATGCTCCTGTGTGTCTTACAAAGACGGGGCTGTTCCAGCAtgtaagctaaaagtcacagtctaagacc-----caatcagaatgggctcttcctctcagcaaaaggcatcccga-gctaacctga-aatctagttcaggccaagatgggaagtcgggggccgtcagacgtgcctgctcaca-------cc-ttctccctttggagttcagacacgactgac i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1292217 255 - 2905041 GTTATCGAAATCTCCCTAGAAACTGTGGAGACAC--CTAGG-CGCAGATGCTCCTGTGTGTCTTACAAAGACGGGGCTGCTCCAGCAtggaagatacaagtcacagtctaagccccg-gacactcagaatgggctcttcctctcagcaaaaggcattctgaggctaacctga-aatctagttcaggccaaggtgggag---ggggggcgtctgacttgcctcctcacagcc----cc-ttctccctttggaattcggacacaactgac i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1250213 256 - 2164891 ATTATCGAAGTCTCCCTAGAAACTGTGGAGACAC--CTAGG-CGCAGATACTCCTGTGTGTGTTACAAAGATGGGGCTGCTCCAGCAGgtaagctaaaagtcacagtctaagccccg-gacaatcagaatgggctcttcctctcagcaaaaggcattctgaagctaacctga-aatctagttcaggccaaggtgggaagt-gggggacgtcagacatgcctcctcgcaccg----ct-ttctcccttt-gaattcagacacaactgac i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1503296 261 - 1813869 ATTATCCAAGTCTCCCTAGAAACTGTGGAGACAC--CTAGG-TGCAGATGCTCCTGTGTGTCTTACAAAGACGGGGCTGCTCCAGCAtgtaagctaaaagtcacagtctaagcccca-gacaatcagaatgtgctcttcctctcagcaaaaggcattccgaagctaacctga-aatctagttcaggccaagatggcaagt-gggggatgtcagatgtgcctcctcacacccacttcc-ttctccctttggagttcagacacaactgac i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10948758 311 - 12073884 I e dasNov3.JH569188 571122 948 + 760995 I e canFam3.chr1 56173082 6728 + 122678785 I e panTro5.chr6 173555366 0 + 175400573 C a score=6819011.000000 s hg38.chr6_KB021644v2_alt 104296 750 + 185823 cagcattcacattaaaacagagatcttaagactttttgtaggaatga--ctgaattccgtcctgagtctagtatagcatcccatgacagcaggccctaaagcaaatggaagtattttaccctaaaatatattttgttgacatattttggaatgtccctgcaaagctgtctgttgtaggaaaatctacattctgtagagaatccctctccctttccaggccttttccctgatctaagagagaattaactaaaagtctggcaccttataagtctgataagagacacttgctgt-gggttctttctgagtctgcgccctggaggctgcgtctgcattataagaa-cttggtctccacagcccttaccttaaccaggctctgctttctatggattccaggcctttaggtaaaaacttaactctttcaaccgactgccaatcagaaaatctttgaatacacctatgacctggaagcccccaccaccacttccagttgtcctgccttcctggaccaaacccctatgcaccttacatgtcttgatggatgacttatgtctccccaaaatctac-aaaaaagcaagctgtaccctgaccacctgggacgcttgttgtcaggta-cccctgaggct--gtcatgggcatgtcctctatcttggcaaaataaacatctgaatccattgaga-------cttgtctcagaggccttctggtttaTGAACAGGTGGAATGGCACTGCTCTCTGCCTGGGCTACTGGGACCGAGACAG s panTro5.chr6 173555366 750 + 175400573 cagcattcacattaaaacagagatcttaagactttttgtaggaatga--ctgaattccgtcctgagtctagtatagcgtcccatgacagcaggccctaaagcaaatggaagtattttaccctaaaatatattttgttgacatgttttggaatgtccctgcaaagctgtctgttgtagggaaatctacattctgtagagaatccctctccctttccaggccttttccctgatctaggagagaattaactaaaagtctggcaccttataagtctgataagagacacttgctgt-gggttctttctgagtctgcgtcctggaggctgcgtctgcattataagaa-cttggtctccacagcccttaccttaaccaggctctgctttctatggattctaggcctttagataaaaacttaactctttcaaccgactgccaatcagaaaatctttgaatacacctatgacctggaagcccccaccaccacttccagttgtcctgccttcctggaccaaacccctatgcaccttacatgtcttgatggatgacttatgtctccccaaaatctac-aaaaaagcaagctgtaccctgaccacctgggacgcttgttgtcaggta-cccctgaggct--gtcatgggcatgtcctcaatcttggcaaaataaacatctgaatccattgaga-------cttgtctcagaggccttctggtttaTGAACAGGTGGAATGGCACTGCTCTCTGCCTGGGCTACTGGGACCGAGACAG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171794437 750 + 173848474 cagcattcacattaaaacagagatcttaagactttttgtaggaatga--ctgaattccgtcctgagtctagtatagcatcccatgacagcaggccctaaagcaaatggaagtattttaccctaaaatatattttgttgacatgttttggaatgtccctgcaaagctgtctgttgtagggaaatctacattctgtagagaatccctctccctttccaggccttttccctgatctaggagagaattaactaaaagtctggcaccttataagtctgataagagacacttgctgt-gggttctttctgagtctgcgtcctggaggctgcgtctgcattataagaa-cttggtctccacagcccttaccttaaccaggctctgctttctatggattctaggcctttagataaaaacttaactctttcaaccgactgccaatcagaaaatctttgaatacacctatgacctggaagcccccaccaccacttccagttgtcctgccttcctggaccaaacccctatgcaccgtacatgtcttgatggatgacttatgtctccccaaaatctac-aaaaaagcaagctgtaccctgaccacctgggacgcttgttgtcaggta-cccctgaggct--gtcatgggcatgtcctcaatcttggcaaaataaacatctgaatccattgaga-------cttgtctcagaggccttctggtttaTGAACAGGTGGAATGGCACTGCTCTCTGCCTGGGCTACTGGGACCGAGACAG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11476929 749 - 12463322 cagcattcacattaaaacagagatcttaagactttttgtagcaatga--ctgaattccatcctgagtctagtatagcatcccatgacagcaggccctaaagcaaagggaagtgttttaccctaaaatatattttgttgacatattttggaatgt-cctgcaaagctgtctgttgtgggaaaatctacattctgtagagcatccctctccctttccaggccttttccctgatctaggagagaattaactaaaaatctggcaccttataagtctgataagaaacacttgctgt-gggttctttctgagcctgcgtcctggaggctgcgtctgcattataagaa-cttggtctccacagcccttaccttaaccaggctctgctttctgtggattccaggcctttagataaaaacttaactctttcaaccgactgccaatcagaaaatctttgaatacacctatgacctggaagcccccaccaccacttccagttgtcctgccttcctggaccaaacccctatgcaccttacatgtcttgatggatgacttatgtctccccaaaatctac-aaaaaagcaagctgtaccctgaccacctgggacgcttgttgtcaggta-cccctgaggct--gtcatgggcatgtcctcaatcttggcaaaataaacatctgaatccattgagg-------cttgtctcagaggccttctggtttaTGAACAGGTGGAATGGCACTGCTCTCTGCCTGGGCTACTGGGACTGAGACAG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156302103 713 + 157873769 cagcattcacatacaagcaaagatcttaagactttttgtagca---------------------------------------atgacagcaggccctaaagcaaatggaagtattttaccctaaaatgtattttgttgacatattttggagtgtccctgcaaagctgtctgttgtgggaaaatctacattctgtagagaatccctctccctttccaggccttttccctgatctaggagggaattaactaagagtctggcaccttataagtctgataagaaacactcgctgt-gggttctctctgagcctgcgtcctggagcctgcatctgcattataagaaccttggtctccacagcccttaccttaaccaggctctgctttctatggattccaggcctttagataaaaacttaactctttcaaccgactgccaatcagaaaatctttgaatacacctatgacctggaagcctccaccaccgctttcagttgtcctgccttcctggaccaaacccctatgcaccttacatgtcttgatggatgactaatgtctcccaaaaatctac-aaaaaagcaagctgtaccctaatcacctgggacgcttgttgtcaggta-cccctgagact--gtcatgggcatgtcctcaatcttggcaaaataaacatctgaatccattgaga-------c-tgtctcagatgccttctggtttaTGAACAGGTGGAATGGCACTGCTCTGTGCCTGGGCTGCTGGGGCCGAGACAG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170331257 750 + 172585720 cagcattcacattaaaacagagatcttaagactttttgtagcaatgacactgaattccgttctgagtctagtatagcatcccatgacagcaggccctaaagcaaatggaagtattttaccctaaaatgtatttcgttgacatattttggaatgtccctgcaaagctgtctgttgtgggaaaatctacattctgtcgagaatccctctccctttccaggccttttccgtgatctaggagagaattaacgaagattctggcaccttagacgtctgataagaaacacttgccat-gggatctctctgagcctgcatcctggaggctgaatctgcattataagaaccttggtctccacagcccttaccttaaccaggctctgcttcctatggattccaggcctttagat-aaaacttaactc--tcaacctattgccaatcagaaaatctttgaatacacctatgacctggaagcccccaccaccacttccagttgtcctgccttcctggaccaaacccctatgcaccttacatgtcttgatggatgacttatgtctcccaaaaatccat-aaaaaagcaagctgcaccctgacctcctggggtgcttgttgtcaggtg-cccctgaggct--gtcatgggcatgtcctcaatcttggcaaaataaatatctgaatccactgaga-------cttgtctcggatgccttctggtttcTGAACAGGTGGAATGGCACTGCTGTCTGCCTGGGCTGCTGGGACCGAGACAG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169076823 750 - 170955103 cagcattcacattaaaacagagatcttaagactttttgtagcaatgacactgaattccgttctgagtctagtatagcatcccatgacagcaggccctaaagcaaatggaagtattttaccctaaaatgtatttcgttgacatattttggaatgtccctgcaaagctgtctgttgtgggaaaatctacattctgtcgagaatccctctccctttccaggccttttccgtgatctaggagagaattaacgaagagtctggcaccttagacgtctgataagaaacacttgccat-gggatctctctgagcctgcatcctggaggctgaatctgcattataagaaccttggtctccacagcccttaccttaaccaggctctgcttcctatggattccaggcctttagat-aaaacttaactc--tcaaccgattgccaatcagaaaatctttgaataaacctatgacctggaagcccccaccaccacttccagttgtcctgccttcctggaccaaacccctatgcaccttacatgtcttgatggatgacttatgtctcccaaaaatccat-aaaaaagcaagctgcaccctgacctcctggggtgcttgttgtcaggtg-cccctgaggct--gtcatgggcatgtcctcaatcttggcaaaataaatatctgaatccactgaga-------cttgtctcggatgccttctggtttcTGAACAGGTGGAATGGCACTGCTGTCTGCCTGGGCTGCTGGGACCGAGACAG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8363208 750 + 10161646 cagcattcacattaaaacagagatcttaagactttttgtagcaatgacactgaattccgttctgagtctagtatagcatcccatgacagcaggccctaaagcaaatggaagtattttaccctaaaatgtatttcgttgacatattttggaatgtccctgcaaagctgtctgttgtgggaaaatctacattctgtcgagaatccctctccctttccaggccttttccgtgatctaggagagaattaacgaagagtctggcaccttagacgtctgataagaaacacttgccat-gggatctctctgagcctgcatcctggaggctgaatctgcattataagaaccttggtctccacagcccttaccttaaccaggctctgcttcctatggattccaggcctttagat-aaaacttaactc--tcaaccgattgccaatcagaaaatctttgaatacacctatgacctggaagcccccaccaccacttccagttgtcctgccttcctggaccaaacccctatgcaccttacatgtcttgatggatgacttatgtctcccaaaaatccat-aaaaaagcaagctgcaccctgacctcctggggtgcttgttgtcaggtg-cccctgaggct--gtcatgggcatgtcctcaatcttggcaaaataaatatctgaatccactgaga-------cttgtctcggatgccttctggtttcTGAACAGGTGGAATGGCACTGCTGTCTGCCTGGGCTGCCGGGACCGAGACAG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1394066 751 + 3144229 cagcattcacattaaaacagagatcttgagactttttgtagcaatgaccctgaattccgtcctgagtctagtatagcatcccatgacagcaggccctaaagcaaatggaagtattttaccctaaaatatatttcgttgacatattttggaatgtccctgcaaagctgtctgttgtgggaaaatctacattctgtcgataatccctctccctttccaggccttttccgtggtgtaggagagaattaactaagagtctggcaccttagacgtctgataagaaacacttgccat-gggatccctctaagcctgcatcctggaggctgcatctgtattataagaaccttggtctccacagcccttaccttaaccaggctctgctttctatggattccaggcctttagat-aaaacttaactc--tcaaccgattgccaatcagaaaatctttgaatacacctatgacctggaagcccccaccaccacttccagttgtcctgccttcctggaccaaacccctatgcaccttacatgtcttgatggatgacttatgtctcccaaaaatctataaaaaaagcaagctgcaccctgacctcctggggtgcttgttgtcaggtg-cccctgaggct--gtcatgggcatgtcctcaatcttggcaaaataaatatctgaatccactgaga-------cttgtctcggatgccttctggtttcTGAACAGGTGGAATGGCACTGCTGTCTGCCTGGGCTGCTGGGACCGAGACAG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96681732 750 + 98384682 cagcattcacattaaaacagagatcttaagactttttgtagcgatgacactgaattccatcctgagtctagtatagcatcccatgacagcaggccctatagcaaatggaagtattttaccctaaaatatatttcgttgacatattttggaatgtccctgcaaagctgtctgttgtgggaaaatctacattctgtcgagaatccctctccctttccaggccttttccgtggtctaggagagaattaactaagagtctggcaccttatacgtctgataagaaacacttgccat-gggatccctctgagcctgcatcctggaggctgcatctgtattataagaaccttggtctccacagcccttaccttaaccaggcttggctttctatggattccaggcctttagat-aaaacttaactc--tcaaccaattgccaatcagaaaatctttgaatacacctatgacctggaagcccccaccaccacttccagttgtcctgccttcctggaccaaacccctatgcaccttacatgtcttgatggatgacttatgtctcccaaaaatccat-aaaaaagcaagctgcaccctgacctcctggggtacttgttgtcaggtg-cccctgaggct--gtcatgggcatgtcctcaatcttggcaaaataaatatctgaatccattgaga-------cttgtctcggatgccttctggtttcTGAACAGGTGGTATGGCACTGCTCTCTTCCTGGGCTGCTGGGACTGAGACAG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8217575 752 - 10857215 cagcattcacattaaaacagagatcttaagactttttgtagcaatgaccctgaattccgtcctgagtctagtatagcatcccgtgacagcaggccctaaagcaaatggaagtattttaccctaaaatatatttcgttgacatattttggaatgtccctgcaaagctgtctgttgtgggagaatccacattctgtcgagaatccctctccctttccaggccttttccgtggtctaggagagaattaactaagagtctggcaccttagacatctgataagaaacacttgccag-gggatctctctaagcctgcatcctggaggctgcatctgcattataagaaccttggtctccacagcccttaccttaaccaggctctgctttctatggattccaggcctttagataaaaacttaactc--tcaaccgattgccaatcagaaaatctttgaatacacctatgacctggaagctcccaccaccacttccagttgtcctgccttcctggaccaaacccctatgcaccttacatgtcttgatggatgacttatgtctcccaaaaatctataaaaaaagcaagctgcaccctgacctcctggggtgcttgttgtcaggtg-cccctgaggct--gtcatgggcatgtcctcaatcttggcaaaataaatatctgaatccattgaga-------cttgtctcggatgccttctggtttcTGAACAGGTGGAATGGCACTGCTGTCTGCCTGGGCTGCTGGGACCGAGACAG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15610484 751 - 23502949 cagcattcacattaaaacagagatcttaagactttttgtagcaatgtcactgacttccgtcctgaatctagtacagcatcccatgacagcaggccctaaggcaaatggaagtattttaccctaaaatacatttcgttgacatattgtggaatgtccctgcaaagctgtctgttgtggaaaaatctacattctgtcgagaatccctctccctttccagaccttttccgtagtctaggagagaattaactaagagtctggcaccttatacgtctgataagaaacacttgccat-gggatccctctgagcctgcatcctggaggctgcatctgcattataagaaccttggtctccacagcccttaccttaaccaggctctgctttctatggattccaggcctttagataaaaacgtaactc--tcaaccgattgccaatcagaaaatctttgaatacacctatgacctggaagcccccaccaccacttccagctgtcctgccttcctggaccaaacccctgtgcaccttacatgtcttgatggatgacttatgtctcccaaaaatctat-aaaaaagcaagctgcaccctgacctcctggagtgcttgttgtcaggtg-cccctgaggct--gtcatgggcctgtcctcaatcttggcaaaataaatatctgaatccatggaga-------cttgtctcggatgcctttgggttTCTGAACAGGTGGAATGGCACTGCCCTCTGCCTGGGCTGCTGGGACCAAGACAG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169883690 742 + 171630274 cagcattcccatgaaagcagagatcttaagac-ttttgtagcaaggacactgaattccatcctgagtctcgtatcacgccccatgaccgcaggttctaaagcaaatggaagtatcttacactaaaatacagttctttgacatactttggaatgtccctgcaaagctgtctgttgtgggagaatctacattctgtagagaatccgtttccctttccaggccttgttcctgctctaggagagaatttaccaagagtctggcacctcttccatcagataagaagcacttgccat-ggattctcttgaagcctgc-ctggggaggctgcatctgcct-----------tgctctccacagctcttaccttaaacaggctctgttttctatgga-tccaggcctttacataaaaacttgggtctttcaactgatttctcatcagaaaacgtttgaatacccctctgaccagg-----ccccccaccacttccagctgccctgcctttctaaaccaaactgatagacaccctatatgtgttgatgggtgactcatgtctcccaaacatctat-aaaagagcgagctgtaccctgaccgcctggggcaggt-ctgtcaggcc-cccctgagcctgtgtcatgggcatttccttaatcttggcaaaataaacatctgcatcaattgagacttgtctcttgtctcagatgctttctggttcaTGAGCAGGTGGAATGGCACTGCTCTCTGCCTGGGCTGCTGAAACCGAAATGG i calJac3.chr4 C 0 I 2 s saiBol1.JH378287 1292472 745 - 2905041 cagcattcccatgaaagcagagaccttaagac-ttctgtagcaatgacaccaaattccatcctgagtctagtccagcaccccatgccagcagaccctaaagcaaatggaagtatcttatcctaaaacatagttctttgacacattttggaatgtccctgcaaagctgtctgtggtgggagaatcgccattctgttgagaatccgtgtccctttccaggccttattcctgacctaggagagaatttactaagagtctggcacctcttgcattggatcagaagcacttgccat-ggttcctcttggagcctgc-ccggggaggctgcacctgccttatgagaa-cctgctctccacagccctcaccttaaacaggctctgcttcctatggattccaggcctttagataaaaactggagtctttcacctgacttcccatcagaaaaactttgaatacctctatgaccagg-----gcccct-ccacttccagctgtcctgcctttctggaccaaacccatagacacactgtatgtcttgatggatgacttacatctcccaaacatgtat-aaaagagcaagctgtaccatgaccccctggggcaggt-ttgtcaggcc-gccccaaggctgcgtcatgggcatttccttaatcttggcaaaataaacatctgcatcaattgaga-------cttgtctcagacactttctggttcaTGGGCAGGTGGAACAGCACTGCTCTCTGCCTGGGCTGCTGGAACTGAAACGG i saiBol1.JH378287 C 0 I 2 s cebCap1.NW_016107695v1 1250469 743 - 2164891 cagcattcccatgaaagcagagatcttaagac-ttttgtagcaatgacactgaattccatcctgagtctagtacagcaccccatgacagcaggccctaaagcaaatggaagtatcttatcctaaaatatagttctctgacatattttggaatgtccctgcaaagctgtctgttgtgggagaatctacattctgttgagaatctgtttgcctttccaggccttattcctgatctaggagagaatttactaagaggctggcacctcttccattggataagaagcacttgccat-ggattctcttg-agcctgc-ctgggaaggctgcatctgccttatgagaa-cttgctctccacagccctcacctt--acaagctctgctttctataaattccaggccttcagataaaaacttgagtctttcaactgacttccaatcagaaaaactttgaatacctctgtgaccagg-----ccccccaccacttccagctgtcctgcctttctggaccaaaccgatagacaccctatatatcttgatggatgacttatgtctcccaaacatgtat-aaaagagcaagctgtaccatgacctactggtgcaggt-ttgtcaggtc-cccctgaggctgcgtcatgggcatttcctaaatcttggcaaaataaacatctgcatcaattgaga-------cttgtttcagacactttctggttcaTGAGCAGGTGGAACGGCACTGCTCTCTGCCTGGGCTGCTGGAACCAAAACGG i cebCap1.NW_016107695v1 C 0 I 17 s aotNan1.NW_018494782v1 1503557 742 - 1813869 cagcattcccatgaaagcagagatcttaagac-ttttgtagcaatgacaccgaattccatcctgagtctagtatagcaccccatgacagcaggctctaaagcaaatggaagtatcttgtcctaaaatacagttctttgacatattttggaatttccctgcaaagccgtctgttgtgggagaatctacattctgtagagaatccatttccctttccaggccttattcctgatctaggagagaatgtact--gagtctggcacctcttccattggataagaagcacttgctatgggattatcttggagcctgc-ctggggaggctgcacctgccttatgagaa-cttgctctccacagccctcaccttaaacaggctctgctttctatggattccaggcctttagataaaaacttgagtctttcaactgatttcccatcagaaaaactttgaatacccctatgaccagg-----ccccccaccacttccagctgtcctgcctttctggaccaaaccgatagacaccttatatgtcttgatggatgacttatgtctcccaaacatgtat-aaaagagcaagctctaccatgaccgcctggggcaagt-ttgtcaggcctcccctgaggctgtgtcatgggcatttccttaatcttggcaaaataaacatctgcatc----gaga-------cttgtctcagacgctttctggttcaTGAGCAGGTGGAACGGCACTGTTCTCTGCCTGGGCTGCTGGAACCGAAACGG i aotNan1.NW_018494782v1 C 0 I 2 e otoGar3.GL873575 10948758 311 - 12073884 I e dasNov3.JH569188 571122 948 + 760995 I e canFam3.chr1 56173082 6728 + 122678785 I a score=108577.000000 s hg38.chr6_KB021644v2_alt 105046 17 + 185823 ACGGCCGCACCCTTAGC s panTro5.chr6 173556116 17 + 175400573 ACAGCTGCACCCCTAGC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171795187 17 + 173848474 ACAGCTGCACCCCTAGC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11477678 17 - 12463322 ACAGCTGCACCCCTAGC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156302816 17 + 157873769 ACGGCTGCACCCCTAGC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170332007 17 + 172585720 ACAGCTGCACCTCTAGC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169077573 17 - 170955103 ACAGCTGCACCTCTAGC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8363958 17 + 10161646 ACAGCTGCACCTCTAGC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1394817 17 + 3144229 ACGGCTGCACCTCTAGC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96682482 17 + 98384682 ACAGCTGCACCTCTAGC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8218327 17 - 10857215 ACGGCTGCACCTCTAGC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15611235 17 - 23502949 ACGGCTGCACCTCCAGG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169884434 13 + 171630274 GTGGCTGCACCCC---- i calJac3.chr4 I 2 I 2 s saiBol1.JH378287 1293219 13 - 2905041 GTGGCTGCACCCC---- i saiBol1.JH378287 I 2 I 1 s aotNan1.NW_018494782v1 1504301 13 - 1813869 GTAGCTGCACCCC---- i aotNan1.NW_018494782v1 I 2 I 3 e otoGar3.GL873575 10948758 311 - 12073884 I e cebCap1.NW_016107695v1 1251212 17 - 2164891 I e dasNov3.JH569188 571122 948 + 760995 I e canFam3.chr1 56173082 6728 + 122678785 I a score=1099592.000000 s hg38.chr6_KB021644v2_alt 105063 122 + 185823 CCCCTTGCAGAGAGCAGCAACATCACCGGGACAATCTTCTCCCAGGCTGTGTCCGTGCTGTTTGTCCTCATGCTCAGCTTTTCTGATTTCCGGAACATTCCTTCATCTGAGCCCCTTTGTTA s panTro5.chr6 173556133 122 + 175400573 CCCCTTGCAGAGAGCAGCAACATCACTGGGACAATCTTCTCCCAGGCCGTGTCCATGCTGTTTGTCCTCATGCTCAGCTTTTCTGATTTCCGGAACATTCCTTCATCTGAGCACCTTGGTGA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171795204 122 + 173848474 CCCCTTGCAGAGAGCAGCAACATCACTGGGACAATCTTCTCCCAGGCCGTGTCCATGCTGTTTGTCCTCATGCTCAGCTTTTCTGATTTCCGGAACATTCCTTCATCTGAGCACCTTGGTGA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11477695 122 - 12463322 CCCCTTGCAGAGAGCAGCAACATCACCGGGACAATCTTCTCCCAGGCCGTGTCCATGCTGTTTGTCCTCACGCTCAGCTTTTCTGATTTCCGGAACATTCCTTCATCTGAGCCCCTTTGTTA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156302833 122 + 157873769 CCCCTTGCGGAGAGCAGCAACATCACCGGGACAATCTTCTCCCAGGCCGTGTCCATGCTCTTTGTCCTCATGCTCAGCTTTTCTGATTTCCAGAACATTCCTTCATCTGAGCACCTTTGTTA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170332024 122 + 172585720 CCCCTTGCGGAGAGCAGCAACATCACCAGGACGATCTTCTTCCAGGCCGTGCCTGTGCTCTTCGTCTTCATGCTCAGCTTTTCTGATTTCCAGAACATTCCTTCATCCGAGCACCTTTGTTA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169077590 122 - 170955103 CCCCTTGCGGAGAGCAGCAACATCACCAGGACGATCTTCTTCCAGGCCGTGCCTGTGCTCTTCGTCTTCATGCTCAGCTTTTCTGATTTCCAGAACATTCCTTCATCCGAGCACCTTTGTTA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8363975 122 + 10161646 CCCCTTGCGGAGAGCAGCAACATCACCAGGACGATCTTCTTCCAGGCCGTGCCTGTGCTCTTCGTCTTCATGCTCAGCTTTTCTGATTTCCAGAACATTCCTTCATCCGAGCACCTTTGTTA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1394834 122 + 3144229 CCCCTTGCGGAGAGCAGCAACATCACCAGGACGATCTTCTTCCAGGCCGTGCCTGTGCTCTTCGTCTTCATGCTCAGCTTTTCTGATTTCCAGAACATTCCTTCATCCGAGCACCTTTGTTA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96682499 122 + 98384682 CCCCTTGCGGAGAGCAGCAACATCACCAGGACGATCTTCTTCCAGGCCGTGCCTGTGCTCTTCGTCTTCATGCTCAGCTTTTCTGATTTCCAGAACATTCCTTCATCCAAGCACCTTTGTTA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8218344 122 - 10857215 CCCCTCGCGGAGAGCAGCAACATCACCAGGAGGATCTTCTTCCAGGCCGTGCCTGTGCTCTTCGTCTTCATGCTCAGCTTTTCTGATTTCCAGAACATTCCTTCATCCGAGCACCTTTGTTA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15611252 105 - 23502949 CCCCTTGTGGAGAGTAACAACATCACCAGGACGAT-----------------CTGTGCTCTTCCTCTTCATGCTCAGCTTTTCTGATTTCCAGAACATTCCTTCATCCGAGCACCTTTGTTA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169884449 119 + 171630274 CCCCTTGAGGAGAGCAGCGACATCAACACAACG-TATTCTCTCAGGCCTCATCCATG--CTTTGTCTTCATGCTCAGCTTTTCTGATTTCCAGAATATTCCTTCATGTGAGCACGTTTGTTA i calJac3.chr4 I 2 C 0 s saiBol1.JH378287 1293233 122 - 2905041 CCGCTTGCGGAGAGCAGCGACATCAACACAAGGATCTTCTCTCAGGCCTCGTCCATGCTCTTTGTCTTCGTGCTCAGCTTTTCTGATTTCCAGAACATTCCTTCATATGAGCACCTTTGTTA i saiBol1.JH378287 I 1 C 0 s cebCap1.NW_016107695v1 1251229 120 - 2164891 CCGCTTGTGGAGAGCAGCGACATCAACACAACGATCTTCTCTCAGGCCTCGTCCATGCTCTTTGCCTTCATGCTCAGCTTTTCTGATTTCCAAAACATTCCTTCA--CGAGCACCTTTGTTA i cebCap1.NW_016107695v1 I 17 C 0 s aotNan1.NW_018494782v1 1504317 121 - 1813869 -CCCTTGTGGAGAGAGGCGACATCAACACAACGATCTTCTCTCAGGCCTCGTCCATGCTCTTTGTCTTCATGCTCAACTTCTCTGATTTCCAGAACATTCCTTCATATGAGCACCTTTGTTA i aotNan1.NW_018494782v1 I 3 C 0 e otoGar3.GL873575 10948758 311 - 12073884 I e dasNov3.JH569188 571122 948 + 760995 I e canFam3.chr1 56173082 6728 + 122678785 I a score=477280.000000 s hg38.chr6_KB021644v2_alt 105185 50 + 185823 AGGGCTGCTGGAGGTCGGCGTGTGGCCGGGTGCACTAAGCTGTGATTCTA s panTro5.chr6 173556255 50 + 175400573 AGGGCTGCTGGAGGTCGGCGTGTGACCTGGTGCACTTAGCTGTGATTCTA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171795326 50 + 173848474 AGGGCTACTGGAGGTCGGCGTGTGACCTGGTGCACTTAGCTGTGATTCTA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11477817 50 - 12463322 AGGGCTGCTGGAGGTCGGCGTGTGACCTGGTGCACTTAGCTGTGATTCTA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156302955 50 + 157873769 AGGGCTGCTGGAGGTCGGCGTGTGACCTGGTGCACTTAGCTGTGATTCTA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170332146 50 + 172585720 AGGGCAGCTGGAGGTCGGCGTGTGACCTGGTGCACTTAGCTGTCATTCTA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169077712 50 - 170955103 AGGGCAGCTGGAGGTCGGCGTGTGACCTGGTGCACTTAGCTGTCATTCTA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8364097 50 + 10161646 AGGGCAGCTGGAGGTCGGCGTGTGACCTGGTGCACTTAGCTGTCATTTTA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1394956 50 + 3144229 AGGGCAGCTGGAGGTCGGCGTGTGATCTGGTGCACTTAGCTGTCATTCTA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96682621 50 + 98384682 AGGGCAGCTGGAGGTCGGCGTGTGACCTGGTGCACTTAGCTGTCATTCTA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8218466 50 - 10857215 AGGGCAGCTGGAGGTCGGCGTGTGATCTGGTGCACTTTGCTGTCATTCTA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15611357 50 - 23502949 AGGGCAGCTGGAGGTCGGCGTGTGACCTGGTGCACTCAGCTGTCATTCTA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169884568 50 + 171630274 AGAGCTGCTGGAGGTCGAGGTGTGAACTGGAACACATAGTTGTGATTCTA i calJac3.chr4 C 0 I 1105 s saiBol1.JH378287 1293355 50 - 2905041 AGAGCTGCTGGAGGTCGGGGTGTGACCTGGCATACATAGTTGTGATTCTA i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1251349 50 - 2164891 AGAGCTGCTGGAGGTCAGGGTGTGAGCTGGCACACGTAGTTGTGATTCTA i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1504438 50 - 1813869 AGAGCTGCTGCAGGTCGGAGTGTGACCTGGCACACGTAGTTGTGATTCTA i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10949069 31 - 12073884 AGGGCTGCGGGAGGTGGGCAG-------------------TGTGATGCTA i otoGar3.GL873575 I 311 C 0 e dasNov3.JH569188 571122 948 + 760995 I e canFam3.chr1 56173082 6728 + 122678785 I a score=3497503.000000 s hg38.chr6_KB021644v2_alt 105235 403 + 185823 CCAATTCCGGGCTGAGGACTCATCCTGCAAGCCCCAGGCAGAGCTGCCTTGTCCATGAAACACCTG-------------------------------------------------------------------------------------------CTGCTCCTGACAAGTGCCCACCGTTTGT-GGGTGG--------------------------------------------CCTCATCTCCC---CAGGGGCCCGGCCACTTTGGA---TGCAGACCTTCATTCTCACAGCTTCTGACCCCACCATCAGCCTGCTG--CATCCAGTCAAGCAAACACGGTGTACGGTCACCACCTGCCTGCC----CCACGCAGATGCCGGCCAGCCACCCGCGCCAACC-------------GCTCCTCCTGGAAGTGGAGCAAGAGGATGAGGGAGCCAAGCCTGGGCTC--CAACTCACTGGGTGCAAATGGGATATTTGCTGCCTTACAGAAAATCTTGCATGTGGAACCAATTGTATAGTGTTATAAAGTAGTGAGACCTGGATTT s panTro5.chr6 173556305 416 + 175400573 CCAATTCCAGGCTGAGGACTCGTCCTGCAAGCCCCAGGCAGAGCTGCCTTGTCCATGAAACACCTG-------------------------------------------------------------------------------------------CTGCTCCTGACAAGTGCCCACCGTTTGT-GGGTGG--------------------------------------------CCTCATCTCCC---CAGGGGCCCGGCCACTTTGGA---TGCGGAGCTTCATTCTCACAGCTTCTGACCCCACCATCAGCCTGCTG--CATCCAGTCAAGCAAACACGGAGCACGGTCACCACCTGCCTGCC----CCACGCAGATGCCAGCCAGCCGCCCGCGCCAACCACCTGCGCCAACCGCTCCTCCTGGAAGTGGAGCAGGAGGATGAGGGAGCCAAGCCTGGGCTC--CAGCTCACTGGGTGCAAATGGGATATTTGCTGCCTTACAGAAAATCTTGCATGTGGAACCAATTGTATAGTGTTATAAAGTAGTGAGACCTGGATTT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171795376 416 + 173848474 CCAATTCCGGGCTGAGGACTCGTCCTGCAAGCCCCAGGCAGAGCTGCCTTGTCCATGAAACACCTG-------------------------------------------------------------------------------------------CTGCTCCTGACAAGTGCCCACCGTTTGT-GGGTGG--------------------------------------------CCTCATCTCCC---CAGGGGCCCGGCCACTTTGGA---TGCGGAGCTTCATTCTCACAGCTTCTGACCCCACCATCAGCCTGCTG--CATCCAGTCAAGCAAACACGGAGCACGGTCACCACCTGCCTGCC----CCACGCAGATGCCAGCCAGCCGCCCGCGCCAACCACCTGCGCCAACCGCTCCTCCTGGAAGTGGAGCAGGAGGATGAGGGAGCCAAGCCTGGGCTC--CAGCTCACTGGGTGCAAATGGGATATTTGCTGCCTTACAGAAAATCTTGCATGTGGAACCAATTGTATAGTGTTATAAAGTAGTGAGACCTGGATTT i panPan2.chr6 C 0 I 1 s gorGor5.CYUI01015032v1 11477867 403 - 12463322 CCAATTCTGGGCTGAGGACTGGTCCTGCAAGCCCCAGGCAGAGCTGCTGTGTCCATGAAACACCTG-------------------------------------------------------------------------------------------CTGCTCCTGACAAGTGCCCACCGTTTGT-GGGTGG--------------------------------------------CCTCATCTCCC---CAGGGGCCCGGCCACTTTGGA---TGCAGACCTTCATTCTCACAGCTTCTGACCCCACCATCAGCCTGCTG--CATCCAGTCAAGCAAACACGGAGCACAGTCACCACCTGCCTGCC----CCATGCAGATGCCGGCCAGCCACCCACGCCAACC-------------GCTCCTCCTGGAAGTGGAGCAGAAGGATGAGGGAGCCAAGCCTGGGCTC--CAACTCACTGGGTGCAAATGGGATATTTGCTGCCTTACAGAAAATCTTGCATGTGGAACCAATTGTATAGTGTTATAAAGTAGTGAGACCTGGATTT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156303005 394 + 157873769 CAAATTCTGGGCTGAGCACTCACCCTGCAAGCCCCAGGTAGAGCTACCTTGTCCATGAAACACCTG-------------------------------------------------------------------------------------------CTGCTCCTGACAAGTGCCCACCATTTCT-GGGTGG--------------------------------------------CCTCATCTCCC---CAGGGACCCGGCCACTTTGGA---TGCGGAGCTTCATTCTCACAGCTTCTGACCCCACGGTCAGCCTGCTG--CATCCAGTCAAGTGAACCCGGGGCATGGTCACCACCTGCCTGCC----CTACGCAGATGCCAGCCAGCCACGCATGCCAACC-------------GCTCCTTCTGGAAGTGGAGCAGGAGGATGAGGGAGCCAAGCCTGGGCTC--CAA-TCACTGGGTGCAAGCGGGATATTTGCTGCCTTACAGAAAATCTTGCATGTGGAACCAATT--------TTATAAAGTAGTGAGACCTGGATTT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170332196 402 + 172585720 CAAATTCCGGGCTGAGCACTCACCCTGTGAGCCCCCGGTGGAGCTGCCTTGTCCATGAAACACTTG-------------------------------------------------------------------------------------------CTGCTCCTGACAAGTGCCCCCCGTTTTT-GGGTGG--------------------------------------------CCTCAGCTCCC---CGGGGGCCCGGCCACGTTGGA---AGTGGAGCTTCAGTCTCACAGCTTCTGACTCCAATGTCTGCCTGCCG--CATCCAGTCCAGCAAACACGGGGCATGGTCACCACCTGCCTGCC----CCACGCAGATGCCGGCCAGCCACCCGTGCCAACC-------------GCTCCTCCTGGAAGTGGAGCAGGAGGATGAGGGAGCTAAGCCTGGGCTC--CAA-TCACTGGGTGTAAATGGGATATTTGCTGCCTTACAGAAAATCTTTCATGTGGATCCAATTTTATAGTGTGATAAAGTAGTGAGACCTGGATTT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169077762 402 - 170955103 CAAATTCCGGGCTGAGCACTCACCCTGTGAGCCCCCGGTGGAGCTGCCTTGTCCATGAAACACTTG-------------------------------------------------------------------------------------------CTGCTCCTGACAAGTGCCCCCCGTTTTT-GGGTGG--------------------------------------------CCTCAGCTCCC---CGGGGGCCCGGCCACGTTGGA---AGCGGAGCTTCAGTCTCACAGCTTCTGACTCCAATGTCTGCCTGCCG--CATCCAGTCCAGCAAACACGGGGCATGGTCACCACCTGCCTGCC----CCACGCAGATGCCGGCCAGCCACCCGTGCCAACC-------------GCTCCTCCTGGAAGTGGAGCAGGAGGATGAGGGAGCTAAGCCTGGGCTC--CAA-TCACTGGGTGTAAATGGGATATTTGCTGCCTTACAGAAAATCTTTCATGTGGAACCAATTTTATAGTGTGATAAAGTAGTGAGACCTGGATTT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8364147 402 + 10161646 CAAATTCCGGGCCGAGCACTCACCCTGTGAGCCCCCGGTGGAGCTGCCTTGTCCATGAAACACTTG-------------------------------------------------------------------------------------------CTGCTCCTGACAAGTGCCCCCCGTTTTT-GGGTGG--------------------------------------------CCTCAGCTCCC---CGGGGGCCCGGCCACGTTGGA---AGCGGAGCTTCAGTCTCACAGCTTCTGACTCCAATGTCTGCCTGCCG--CATCCAGTCCAGCAAACACGGGGCATGGTCACCACCTGCCTGCC----CCACGCAGATGCCGGCCAGCCACCCGTGCCAACC-------------GCTCCTCCTGGAAGTGGAGCAGGAGGATGAGGGAGCTAAGCCTGGGCTC--CAA-TCACTGGGTGTAAATGGGATATTTGCTGCCTTACAGAAAATCTTTCATGTGGAACCAATTTTATAGTGTGATAAAGTAGTGAGACCTGGATTT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1395006 490 + 3144229 CAAATTCCGGGCTGAGCACTCACCCTGTGAGCCCCCGCTGGAGCTGCCTTGTCCATGAAACACTTGCTGCTCCTGACAAGTGCCCCCCTTTTCTGGGTGGCCTCAGCCCCCTGCTCCTGACAAGTGCCCCCCATTTCTGGGTGGC---CTCAGCCCCCTGCTCCTGACAAGTGCCCCCCTTTTCT-GGGTGG--------------------------------------------CCTCAGCTCCC---CGGGGGCCCGGCCACGTTGGA---AGCGGAGCTTCAGTCTCACAGCTTCTGACCCCACTGTCTGCCTGCCG--CATCCAGTCCAGCAAACACAGGGCATGGTCACCACCTGCCTGCC----CCACGCAGATGCCGGCCAGCCACCCGCGCCAACC-------------GCTCCTCCTGGAAGTGGAGCAGGAGGATGACGGAGCCAAGCCTGGGCTC--CAA-TCACTGGGTGTAAACGGGATCTTTGCTGCCTTACAGAAAATCTTTCATGTGGAACCAATTTTGTAGTGTTATAAAGTAGTGAGACCTGGATTT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96682671 444 + 98384682 CAAATTCTGGGCTGAGCACTCACCCTGTGAGCCCCCGGTGGAGCTGCCTTGTCCATGAAACACTTGCTGCTCCTGACAAGTG-AACCCATTTCTG-----------------------------------------------GGTGGCCTCAGCCCACTGCTCCTGACAAGTG-AACCCATTTCT-GGGTGG--------------------------------------------CCTCAGCTCCC---CGGGGGCCCAGCCACATTGGA---AGTGGAGCTTCAGTTTCACAGCTTCTGACCCCACTGTCTGCCTGCCG--CATCCAGTCCAGCAAACACGGGGCATGGTCACCACCTGCCTGCC----CCAGGCAGATGCCGGCCAGCCACCCGCGCCAACC-------------GCTCCTCCTGGAAGTGGAGCGGGAGGATGAGGGAGCCAAGCCTGGGCTC--CAG-TCACTGGGTGTAAATGGGATATTTGCTGCCTTACAGAAAATCTTTCATGTGGAACCAATTTTATAGTGTTATAAAGTAGTGAGACCTGGATTT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8218516 449 - 10857215 CAAATTCCGGGCTGAGCACTCACCCTGTGAGCCCCCGGTAGAGCTGCCTTGTACATGAAACACTTGCTGCTCCTGACAAGTGCCCCCCATTTCTG-----------------------------------------------GGTGGCCTCAGCCCCCTGCTTCTGACAAGTGCCCCCCGTTTCT-GGGTGG--------------------------------------------CCTCAGCTCCC---CAGGGGCCCGGCCACGTTGGAATGAGTGGAACTTCAGTCTCACAGCTTCTGACTCCAATGTCTGCCTGCCG--CATCCAGTCCAGCAAACACGGGGCGTGGTCACCACCTGCCTGCC----CCACGCAGATGCCGGCCAGCCACCCGCGCCAACC-------------GCTTCTCCTGGAAGTGAAGCGGGAGGATGAGGGAGCCAAGCCTGGGCTC--CAA-TCACTGGGTGTAAACGGGATCTTTGCTGCCTTACAGAAAATCTTTCATGTGGAACCAATTTTGTAGTGTTATAAAGTAGTGAGACCTGGATTT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15611407 490 - 23502949 TAAATTCCGGGCTGAGCACTCGCCCTGTGAGCCTCCAGTGGAGCTGCCTTGTCCATGAAACATCTGCTGCTCCTGACAAGTGCTCCCCATTTCTG-----------------------------------------------GATGGCCTCAGCTCTCTACTCCTGACAAGTGCCCCCCATTTCT-GGGTGGCCTCAGCTCTCTGTTCCTGACAAGTGCATCCCATTTTTGGGTGACCTCAGCTCCC---CGGGGGCCCGGCCACATTGGA---AGCGGAGCTTTAGTCTCACAGCTTCTGACTCCAATGTCTGCCTGCCG--CATCCAGTCAAGCAAACACGGGGCATGGTCACCACCTGCCTGCC----CCATGCAGATGCCAGCCAGCCACCCACGCCAACT-------------GCTCCTCCTGGAAGTGGAGCAGGAGGATGAGGGAGCCAAGCCTGGGCTC--CAA-TCACTGGGTGTAAACGGGATATTTGCTGCCTCACAGAAAATCTTTCATGTGGAACCAATTTTATAGTGTTATAAAGTAGTGAGACCTGGATTT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169885723 406 + 171630274 CAAATTTCCAGCTGAGCTCTCACCCTGCAAACCCCAGGCGGAAACAGCATGTCCATGAAACACCTG-------------------------------------------------------------------------------------------CTTCTCCTGACAAATGCCCACCATCTCCGGGGCAG--------------------------------------------ACTCATCTCCC---CCAGGGCCCGGCCACTTTGGA---ATCTGAGCTTCATTCTCACAGCTCCCGACCCTGCCATCAGCCTGCTG--CAGCCAGTGAAGCAAGCACAAGGCACCATCAGCGCCTGCCTGCATACGCCATGCAGAGGCCGGCCAGCCGCCGGCACCAACC-------------CCTCCTCCTGAAAGCGGAGCAGGAGGATGAGGGAGCCAAGCCTGGGCTC--TAG-TCACTGGCTGCAAACGGGATATTTGCTCCCGTGCAGAAAATCTTGCATGTGGAACCAATTTTAGAGTGTTAC-GGGTGGTGAGGCCTGGAGTT i calJac3.chr4 I 1105 C 0 s saiBol1.JH378287 1293405 382 - 2905041 CAAA-TTCAAGTT-----------TTGCAAACCCCAGGCAGAACCCGCATGTCCATGAAACACCTG-------------------------------------------------------------------------------------------CTTCTCCTGACAAGTGCCCACCATCTCT-GGGCGC--------------------------------------------CCTCATCTCCC---CCAGGGCCTGGCCACTTTGGA---AGTGGAGCTTCATTCTCACAGCTCCTGACCCCGACATCAGCCTGCTG--CAGCCAGTGATGCAA-------ACACCATCACTGCCTGCCTGCC----CCATGCAGAGGCCGGCCAGCTGCCCCCAACAACC-------------CCTCCTCCTGGAAGTGGAGCAGGAGGATGACGGAGCCAAGCCTGGGCTC--TAA-TCGCTGGCTGAAAATGGGATGTTTGCTCCCGTGCAGAAAACCTTACATGTGGAACCAATTTTAAAGTGTTAT-GGGTGGTCAGACCTGGATTT i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1251399 392 - 2164891 CAAA-TTCAAGTGTTGCTCTCGCCCTGCAAACACCAGGCAGAACCTGCATGTCTATGAAACACCTG-------------------------------------------------------------------------------------------CCTCTCCTGACAAGTGCCCACCAACTG--GGGCGG--------------------------------------------CCTCATCTCCC---CCAGGGCCTGGCCACTTTGGA---AGCGGAGCTTCATTCTCAGAGCTCCTGACCCCGACATCAGCCTGCTG--CAGCCAGTGAAGCAA-------ACACCATCACTGCCTGCCTGCC----CCATGCAGAGGCCGGCCAGCCGCCCGCAACAACC-------------CCTTCTCCTGGAAGTGGAGCAGGAGGATGAGGGAGCCAAGCCTGGGCTC--TAA-TCACTGGCTGCAAACGGGATATTTGCTCCTGTGCAGAAAATCTTACATGTGGAGCCAATTTTAAAGTGTTAT-GGGTGGTGGGACCTGGATTT i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1504488 402 - 1813869 CAAATTCCCAGCTAAGCTCTCGCCCTGCAAACCCCAGGCGGAACCTGCATGTCCATGAAACACCTG-------------------------------------------------------------------------------------------CTTCTCCTGACAAGTGCCTACCATCTCTGGGGCGG--------------------------------------------CCTCATCTCCC---CCAGGGCCCTGCCACTTTGGA---AGCAGAGCTTAATTCTCACAGCTCCTGATCCCGACATCAGCCTGCTG--CAGCCAGTGAAGCAAACACAAGGCACCATCACTGCCTGCCTGCC----CCATGCAGAGGCCGGCCAGCCGCCCGCACCAACC-------------CCTCCTCCTGGAAATGGAGCAGGAGGATGAGGGAGCCAAGCCTGGGCTC--TAA-TCACTGGCTGCAAACGGGATATTTGCTCCCGTGCAAAAAACCTTGCATGTGGAACCAATTTCAAAGTGTTAT-GGGTGGTGAGACCTGGATTT i aotNan1.NW_018494782v1 C 0 I 3467 s otoGar3.GL873575 10949100 355 - 12073884 -CAGCCCTGGGCTAAGTACCCTCCTGCCCAGCCCC--GCAGAGCTGCTGTGTCCAGGGAGCATGCG-------------------------------------------------------------------------------------------CT------------TGTTTACTGTGCCC-GGGTTG--------------------------------------------CCTCACGTCCCCCGCGGGTGCCCCACTGCTCAGCA---CGCCAAGCTGCATTGTCACAGCT-CTGACACTACCCACAGCATGCCAGTCACCCAGCC-GGCCCTCGCTGGTGACAGACACTGCCTGCCTGTC----CAGCACGGACCCC----------------------------------GCTCCTCCTGAAGATGGGGCAA---------------AGGCCCAAACTCTACAG-TTCTTGGGTACAGACTGGGTCTTTGTTGCCATAAACAAAATCCTGCATGTGAAACCAATTATA-ACTGTTAGGAAGTAATAAGAATTGAATTT i otoGar3.GL873575 C 0 C 0 e dasNov3.JH569188 571122 948 + 760995 I e canFam3.chr1 56173082 6728 + 122678785 I a score=846374.000000 s hg38.chr6_KB021644v2_alt 105638 100 + 185823 AAAAAATGACGCATGAACTTTTACATTCCATACAC-TTCAGTGGGCTGTTCCTCACCTGCACTGTGCTAGCCAGAAGC-AGTGATGAGAGTCAGCTTCCTCA s panTro5.chr6 173556721 100 + 175400573 AAAAAATGACGCATGCCCTTTTACATTCCATACAC-TTCAGTGGGCTGTTCCTCACCTGCACTGTGCTAGCCAGAAGC-AGTGATGAGAGTCAGCTTCCTCA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171795793 100 + 173848474 AAAAAATGACGCATGCCCTTTTACATTCCATACAC-TTCAGTGGGCTGTTCCTCACCTGCACTGTGCTAGCCAGAAGC-AGTGATGAGAGTCAGCTTCCTCA i panPan2.chr6 I 1 C 0 s gorGor5.CYUI01015032v1 11478270 100 - 12463322 AAAAAATGATGCATGCACTTTTACATTCCATAAAC-TTCAGTGGGCTGTTCCTCACCTGCACTGTGCTAGCCAGAAAC-AGTGATGAGAGTCAGCTTCCTCA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156303399 100 + 157873769 TTAAAATGATGCATACACTTTTACATTCCACACAC-TTCAGTGGGCTGTTCCTCACCTGCACTGTCCCAGCCAGAAAC-AGTGATGAGAGTCACCTTCCTCA i nomLeu3.chr3 C 0 M 1062 s rheMac8.chr4 170332598 100 + 172585720 TAAAAATGACGCATGCACTTTTACATTCCATACTC-TTCAGTGGGCTGTTCCTCACCTGCACTGTCCTAGCCAGAAAC-AGTGATGAGAGTCAGCTTTCTCA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169078164 100 - 170955103 TAAAAATGACGCATGCACTTTTACATTCCATACTC-TTCAGTGGGCTGTTCCTCACCTGCACTGTCCTAGCCAGAAAC-AGTGATGAGAGTCAGCTTTCTCA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8364549 100 + 10161646 TAAAAATGACGCATGCACTTTTACATTCCATACTC-TTCAGTGGGCTGTTCCTCACCTGCACTGTCCTAGCCAGAAAC-AGTGATGAGAGTCAGCTTTCTCA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1395496 100 + 3144229 TAAAAATGACGCATGCACTTTTACATTTCATACTC-TTCAGTGGGCTGTTCCTCAACTGCACTGTCCTGGCCAGAAAC-AGTGATGAGAGTCAGCTTCCTCA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96683115 100 + 98384682 TAAAAATGACGCATGCACTTTTACATTCCATACTC-TTCAGTGGGCTGTTCCTCACCTGCACTGTCCTAGCCAGAAAC-AGTGATGAGAGTCAGCTTCCTCA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8218965 100 - 10857215 TAAAAATGACGCATGCACTTTTACATTTCATACTC-TTCAGTGGGCTGTTCCTCACCTGCACTGTCCTGGCCAGAAAC-AGTGATGAGAGTCAGCTTCCTCA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15611897 100 - 23502949 TAAAAATGACGCATGCACTTTTACATTCCATACTC-TTCAGTGGGCTGTTCCTCACCTGCACTGTCCTAGCCAGAAAC-AGTGATGAGAGTCAGTTTCCTCA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169886129 100 + 171630274 TTAGAAGGATGCATGCACTTCCATGTTCCATACACTTTCAGAGGGCTGTTCCTCATCTGCACCGTCCTAGCCAGAAAC-AGTGGTGAGAGTCAGCTT-CTCA i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1293787 100 - 2905041 TTAAAAGGATGCATGCACTTTTATGTT-CATACACGTTCAGAGGGCTGCTCCTCATCTGCACCGTCCTAGCCAGAAAC-AGGGCTGAGAGTCAGCTTCCTCA i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1251791 84 - 2164891 TTAAAAGGATGCATGCACT-----------------TTCGGAGGACTGTTCCTCATCTGCACCGTCCTAACCAGAAAC-AGTGGTGGGAGTCAGCTTCCTTA i cebCap1.NW_016107695v1 C 0 C 0 s otoGar3.GL873575 10949455 102 - 12073884 AAAAAATGATGTGTTCACTTTTAAATTTTATATACTTTAAGAGATCTATTCCTTACCCACATTGCCATGGCCAGAAACTAACAGTGATAGATAGCTGAGCTA i otoGar3.GL873575 C 0 C 0 e aotNan1.NW_018494782v1 1504890 3467 - 1813869 I e dasNov3.JH569188 571122 948 + 760995 I e canFam3.chr1 56173082 6728 + 122678785 I a score=44415.000000 s hg38.chr6_KB021644v2_alt 105738 5 + 185823 TGTCT s panTro5.chr6 173556821 5 + 175400573 TGTCT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171795893 5 + 173848474 TGTCT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11478370 5 - 12463322 TGTCT i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170332698 5 + 172585720 TGTCT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169078264 5 - 170955103 TGTCT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8364649 5 + 10161646 TGTCT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1395596 5 + 3144229 TGTCT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96683215 5 + 98384682 TGTCT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8219065 5 - 10857215 TGTCT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15611997 5 - 23502949 TGTCT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169886229 5 + 171630274 TGTCT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1293887 5 - 2905041 TGTTT i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1251875 5 - 2164891 TGCCC i cebCap1.NW_016107695v1 C 0 C 0 s otoGar3.GL873575 10949557 5 - 12073884 TGTCT i otoGar3.GL873575 C 0 C 0 e aotNan1.NW_018494782v1 1504890 3467 - 1813869 I e dasNov3.JH569188 571122 948 + 760995 I e canFam3.chr1 56173082 6728 + 122678785 I e nomLeu3.chr3 156303499 1062 + 157873769 M a score=657575.000000 s hg38.chr6_KB021644v2_alt 105743 78 + 185823 TAAC---------------------GCCTTTTAAAACTCCAGGTA--GGGGCAATTCGAAAGATTAGATGCTTTGTTATCGAAATTGTCTTCCCAAACCTG s panTro5.chr6 173556826 78 + 175400573 TAAC---------------------GCCTTTTAAAACTCCAGGTA--GGGGCAATTCGAAAGATTAGATGCTTTGTTATCGAAATTGTCTTCCCAAACCTG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171795898 78 + 173848474 TAAC---------------------GCCTTTTAAAACTCCAGGTA--GGGGCAATTCGAAAGATTAGATGCTTTGTTATCGAAATTGTCTTCCCAAACCTG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11478375 77 - 12463322 TAAC---------------------GCCTTTTAAAACTCCAGGCA--GGGGCAATTCGAAAGATTAGATGCTTTGTT-TCGAAATTGTCTTCCCAAACCTG i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170332703 99 + 172585720 TAACGCCTAAGGAATCTTATCTACAGCCTTTTAAAACTCCAGGTA--GGGGCAATTCGAAAGATTATATGCTTTATTATCGAAATTGTCTTCCCGAACCTG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169078269 99 - 170955103 TAACGCCTAAGGAATCTTATCTACAGCCTTTTAAAACTCCAGGTA--GGGGCAATTCGAAAGATTATATGCTTTATTATCGAAATTGTCTTCCCGAACCTG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8364654 99 + 10161646 TAACGCCTAAGGAATCTTATCTACAGCCTTTTAAAACTCCAGGTA--GGGGCAATTCGAAAGATTATATGCTTTATTATCGAAATTGTCTTCCCGAACCTG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1395601 99 + 3144229 TAACACCTAAGGAATCTTATCTACAGCCTTTTAAACCTCCAGGTA--GAGGCAATTCAAAAGATTATATGCTTTGTTATCGAAATTGTCTTCCCGAACCTG i cerAty1.NW_012002071v1 C 0 I 329 s chlSab2.chr13 96683220 99 + 98384682 TAACGCCTAAGGAATCTTATCTACAGCCTTTTAAACCTCCAGGTA--GGGGCAATTCAAAAGATTATATGCTTTGTTATCGAAATTGTCTTCCCGAACCTG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8219070 99 - 10857215 TAACGCCTAAGGAATCTTATCTACAGCCTTTTAAACCTCCAGGTA--GGGGCAATTCAAAAGATTATATGCTTTGTTATCGAAATTGTCTTCCCGAACCTT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15612002 99 - 23502949 TAACACCTAAGGAATCTTATCTACAGTCTTTTAAAACTCCAGGTA--GGGGCAATTCGAAAGATTATATGCTTTGTTATCGAAATTGTCTTCCCGAACCTG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169886234 99 + 171630274 TAACACCTAGGGAATGTCATCCACAGCCCTTCAAAGCTCCAGACG--CCGGCAACTCAAAGGATTAGCTGCTTCCTTGTCGAAATTGTCTTCCCAAACCTG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1293892 99 - 2905041 TAATGCCTAGGGAGTCTCATCCACAGCCCGTCAAAACTCCAAACA--TGGGCAGTTCAAAAGATTAGATGCTTTCTTATTGAAATTGTCTTCCCAAACCTG i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1251880 99 - 2164891 TAACGCCTAGGGAATCTCATCCACAGCCCTTCAAAACTCCAAATG--CAGGCAATTCAAAAGATTAGATGCTTTCTTATTGAAATTATCTTCCCAAACCTG i cebCap1.NW_016107695v1 C 0 C 0 s otoGar3.GL873575 10949562 99 - 12073884 TAATTCTTAAGAAATATCATC-ACACCCTTTTAAAACTCTAGATATGGGGGCAACTTGAAAGA-AAAATAATCTCTTACTCAAGTTGTTTCAACACACCTG i otoGar3.GL873575 C 0 C 0 s dasNov3.JH569188 572070 79 + 760995 ---------------------TAGGGCCTTTTAGAACTCCAGGTGT-AGGGAAATAGGAAAAGAGTGATGATTTCTTATCCAAGTTGTCTTAATAATCCAA i dasNov3.JH569188 I 948 C 0 e aotNan1.NW_018494782v1 1504890 3467 - 1813869 I e canFam3.chr1 56173082 6728 + 122678785 I e nomLeu3.chr3 156303499 1062 + 157873769 M a score=216156.000000 s hg38.chr6_KB021644v2_alt 105821 28 + 185823 GAAAGTGAAACCCAATGA-GCATTGAGCA s panTro5.chr6 173556904 28 + 175400573 GAAAGTGAAACCCAATGA-GCATTGAGCA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171795976 28 + 173848474 GAAAGTGAAATCCAATGA-GCATTGAGCA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11478452 28 - 12463322 GAAAGTGAAACCCAATGA-GCATTGAGCA i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170332802 28 + 172585720 GAAAGTGAAACCCAATGA-GCATTGAGCA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169078368 28 - 170955103 GAAAGTGAAACCCAATGA-GCATTGAGCA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8364753 28 + 10161646 GAAAGTGAAACCCAATGA-GCATTGAGCA i macNem1.NW_012011000v1 C 0 C 0 s chlSab2.chr13 96683319 28 + 98384682 GAAAGTGAAACCCAATGA-GCATTGAGCA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8219169 28 - 10857215 GAAAGTGAAACCTAATGA-GCATTGAGCA i manLeu1.NW_012106474v1 C 0 I 422 s colAng1.NW_012114488v1 15612101 28 - 23502949 GAAAGTGAAACCCAATGA-GCACTGAGCA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169886333 28 + 171630274 GAAAGTGAAACCCAATGA-GCACTGAGCA i calJac3.chr4 C 0 I 1 s saiBol1.JH378287 1293991 28 - 2905041 GAAAGTGAAACCCAATGA-GCATTGAGCA i saiBol1.JH378287 C 0 I 1 s cebCap1.NW_016107695v1 1251979 28 - 2164891 GAAAGTGAAACCCAATGA-GCACTGAGCA i cebCap1.NW_016107695v1 C 0 I 1 s otoGar3.GL873575 10949661 28 - 12073884 CAATGTCAAACCCAGCTA-GCAGTGAGCA i otoGar3.GL873575 C 0 C 0 s dasNov3.JH569188 572149 27 + 760995 AAATGTTAAACTCTATGGTTTTTTGAG-- i dasNov3.JH569188 C 0 C 0 e aotNan1.NW_018494782v1 1504890 3467 - 1813869 I e canFam3.chr1 56173082 6728 + 122678785 I e cerAty1.NW_012002071v1 1395700 329 + 3144229 I e nomLeu3.chr3 156303499 1062 + 157873769 M a score=167985.000000 s hg38.chr6_KB021644v2_alt 105849 36 + 185823 AATAGACCC--TGGAAGCCGCAC-ACCTGCTCAGGAAAG s panTro5.chr6 173556932 36 + 175400573 AATAGACCC--TGGAAGCCGCGC-ACCTGCTCAGGAAAG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171796004 36 + 173848474 AATAGACCC--TGGAAGCCGCGC-ACCTGCTCAGGAAAG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11478480 36 - 12463322 AATAGACCC--TGGAAGCCGCGC-ACCTGCTCAGGAAAG i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170332830 36 + 172585720 AAGAGATCC--TGGAAGCCGTGC-ACCTGCTCAGGAAAG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169078396 36 - 170955103 AAGAGATCC--TGGAAGCCGTGC-ACCTGCTCAGGAAAG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8364781 36 + 10161646 AAGAGATCT--TGGAAGCCGTGC-ACCTGCTCAGGAAAG i macNem1.NW_012011000v1 C 0 C 0 s chlSab2.chr13 96683347 36 + 98384682 AAGAGATCC--TGGAAGCTGTGC-ACCTGCTCAGGAAAG i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15612129 36 - 23502949 AAAAGATTC--TGGAAGCCATGC-ACCTGCTCAGGAAAG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169886362 36 + 171630274 AGTGGTCCT--GGGAAGCCGTGC-ACCTGCTCAGGAAAG i calJac3.chr4 I 1 I 32 s saiBol1.JH378287 1294020 36 - 2905041 AGCGGTCCC--GGGAAGCCGTGC-ACCTGCTCAGGAAAG i saiBol1.JH378287 I 1 I 232 s cebCap1.NW_016107695v1 1252008 36 - 2164891 CGTGGTCCC--GGGAAGCCGTGC-ACCTGCTCAGGAAAG i cebCap1.NW_016107695v1 I 1 I 62 s otoGar3.GL873575 10949689 4 - 12073884 --------T--TGG------------------------- i otoGar3.GL873575 C 0 C 0 s dasNov3.JH569188 572176 39 + 760995 AAGAGGCCCAAAGAAAGTCATATAAACTGTTCAGCAAAT i dasNov3.JH569188 C 0 C 0 e aotNan1.NW_018494782v1 1504890 3467 - 1813869 I e canFam3.chr1 56173082 6728 + 122678785 I e cerAty1.NW_012002071v1 1395700 329 + 3144229 I e nomLeu3.chr3 156303499 1062 + 157873769 M e manLeu1.NW_012106474v1 8219197 422 - 10857215 I a score=-39846.000000 s hg38.chr6_KB021644v2_alt 105885 8 + 185823 -CGg------------------------------agggg s panTro5.chr6 173556968 8 + 175400573 -CAG------------------------------AGCGG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171796040 8 + 173848474 -Cag------------------------------agcgg i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11478516 8 - 12463322 -CGg------------------------------agggg i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170332866 37 + 172585720 -CAAagagagagagagagagagaaagaatgag-gagaga i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169078432 36 - 170955103 -CAA--agagagagagaaagagaaagaatgagagagaga i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8364817 36 + 10161646 -CAA--agagagagagagagagaaagaatgagagagaga i macNem1.NW_012011000v1 C 0 C 0 s chlSab2.chr13 96683383 30 + 98384682 -CAA--agagagagagagagagagaca------gacaga i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15612165 4 - 23502949 -CAA----------------------------------a i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169886430 8 + 171630274 -cag------------------------------agaga i calJac3.chr4 I 32 C 0 s saiBol1.JH378287 1294288 8 - 2905041 -cag------------------------------agaga i saiBol1.JH378287 I 232 C 0 s otoGar3.GL873575 10949693 7 - 12073884 --------------------------------GGTGGGG i otoGar3.GL873575 C 0 C 0 s dasNov3.JH569188 572215 2 + 760995 TC------------------------------------- i dasNov3.JH569188 C 0 C 0 e aotNan1.NW_018494782v1 1504890 3467 - 1813869 I e cebCap1.NW_016107695v1 1252044 62 - 2164891 I e canFam3.chr1 56173082 6728 + 122678785 I e cerAty1.NW_012002071v1 1395700 329 + 3144229 I e nomLeu3.chr3 156303499 1062 + 157873769 M e manLeu1.NW_012106474v1 8219197 422 - 10857215 I a score=59180.000000 s hg38.chr6_KB021644v2_alt 105893 37 + 185823 gag----------------agagag------------------------------------------------------------------------agagagagaga--------------------------CCGCTTCTGTGGAGCAG s panTro5.chr6 173556976 45 + 175400573 gag----------------agagag------------------------------------------------------------------------agagagagagagagaga------ga------------TCGCTTCTGTGGAGCAG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171796048 39 + 173848474 gag----------------agagag------------------------------------------------------------------------agagagagaga------------ga------------TCGCTTCTGTGGAGCAG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11478524 37 - 12463322 gac----------------agagag------------------------------------------------------------------------agagagagaga--------------------------CCGCTTCTGTGGAGCAG i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170332903 57 + 172585720 gag----------------agagag------------------------------------------------------------------------agagagagagagagaga------gagagagagagagCGCGCTTCAGTAGAACAG i rheMac8.chr4 C 0 I 6 s macFas5.chr4 169078468 57 - 170955103 gag----------------agagag------------------------------------------------------------------------agagagagagagagaga------gagagagagagagCGCGCTTCAGTAGAACAG i macFas5.chr4 C 0 I 6 s macNem1.NW_012011000v1 8364853 45 + 10161646 gag----------------agagag------------------------------------------------------------------------agagagagagagagaga------ga------------gCGCTTCAGTAGAACAG i macNem1.NW_012011000v1 C 0 I 6 s chlSab2.chr13 96683413 43 + 98384682 aag----------------agagag------------------------------------------------------------------------agagagagagacagaga------ga--------------gCTTCAGTGGAACAG i chlSab2.chr13 C 0 I 6 s colAng1.NW_012114488v1 15612169 45 - 23502949 gag----------------agagag------------------------------------------------------------------------agagagagagagagaga------ga------------gCGCTTCAGTAGAACAG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169886438 139 + 171630274 gagagagacatagagacacaaagtgacacagagcatcagagagagacatagagacatacagagagacagagacacagagagacagagagacacagaaagagagagagagTAAGGAAGTGCGC------------GCGCTTCTGCAGAGCAG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1294296 39 - 2905041 gag----------------aaagtg------------------------------------------------------------------------agagagagaga------------gc------------gagCCTCTGTAGAGCAG i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1252106 37 - 2164891 gag----------------aaag--------------------------------------------------------------------------agaaagagaga------------gc------------gagCTTCTGCAGAGCAG i cebCap1.NW_016107695v1 I 62 C 0 s otoGar3.GL873575 10949700 15 - 12073884 ----------------------------------------------------------------------------------------------------------------------------------------GCTTTGGTCCAGCAG i otoGar3.GL873575 C 0 C 0 s dasNov3.JH569188 572217 24 + 760995 ---------------------------------------------------------------------------------------------------AGAAAAAGT------------TA------------ATGCCTCGTAGGA---- i dasNov3.JH569188 C 0 C 0 e aotNan1.NW_018494782v1 1504890 3467 - 1813869 I e canFam3.chr1 56173082 6728 + 122678785 I e cerAty1.NW_012002071v1 1395700 329 + 3144229 I e nomLeu3.chr3 156303499 1062 + 157873769 M e manLeu1.NW_012106474v1 8219197 422 - 10857215 I a score=28735.000000 s hg38.chr6_KB021644v2_alt 105930 3 + 185823 CCA s panTro5.chr6 173557021 3 + 175400573 CCA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171796087 3 + 173848474 CCA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11478561 3 - 12463322 CCA i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170332966 3 + 172585720 CCA i rheMac8.chr4 I 6 C 0 s macFas5.chr4 169078531 3 - 170955103 CCA i macFas5.chr4 I 6 C 0 s macNem1.NW_012011000v1 8364904 3 + 10161646 CCA i macNem1.NW_012011000v1 I 6 C 0 s chlSab2.chr13 96683462 3 + 98384682 CCA i chlSab2.chr13 I 6 C 0 s manLeu1.NW_012106474v1 8219619 3 - 10857215 CCA i manLeu1.NW_012106474v1 I 422 C 0 s colAng1.NW_012114488v1 15612214 3 - 23502949 CCA i colAng1.NW_012114488v1 C 0 I 6 s calJac3.chr4 169886577 3 + 171630274 CCA i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1294335 3 - 2905041 CCA i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1252143 3 - 2164891 CCA i cebCap1.NW_016107695v1 C 0 C 0 s otoGar3.GL873575 10949715 3 - 12073884 CCA i otoGar3.GL873575 C 0 C 0 s dasNov3.JH569188 572241 2 + 760995 -CA i dasNov3.JH569188 C 0 C 0 e aotNan1.NW_018494782v1 1504890 3467 - 1813869 I e canFam3.chr1 56173082 6728 + 122678785 I e cerAty1.NW_012002071v1 1395700 329 + 3144229 I e nomLeu3.chr3 156303499 1062 + 157873769 M a score=1240909.000000 s hg38.chr6_KB021644v2_alt 105933 186 + 185823 ACCCAGTTTTCTTATGGAGTCCCAGAGGATACACAGCCCCTCCCAC-GGCCATGCAGCCAGCCGGTGGGGAAGCAACAACCAGAACCCGGCTTTCTTGAG--------------------------------ATCCGACCGGAGGCCCCCA-GGAGAACACCCAGCCAGTTGCTCCGTGCTGACCAGGCTGTGTTCCCGCTGTGGTCAGAGCAGCTCCGC s panTro5.chr6 173557024 186 + 175400573 ACCCAGTTTTCTTATGGAGTCCCAGAGGATACACAGCCCCTCCCGC-GGCCATGCAGCCAGCCGGTGGGGAAGCAACAACCAGAACCCGGCTTTCTTGAG--------------------------------ATCCGACCGGAGGCCCCCA-GGAGAACACCCAGCCAGTTGCTCCGTGCTGACCAGGCTGTGTTCCCGCTGTGGTCAGAGCAGCTCCAC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171796090 186 + 173848474 ACCCAGTTTTCTTATGGAGTCCCAGAGGATACACAGCCCCTCCCGC-GGCCATGCAGCCAGCCGGTGGGGAAGCAACAACCAGAACCCGGCTTTCTTGAG--------------------------------ATCCGACCGGAGGCCCCCA-GGAGAACACCCAGCCAGTTGCTCCGTGCTGACCAGGCTGTGTTCCCGCTGTGGTCAGAGCAGCTCCAC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11478564 186 - 12463322 ACCCAGTTTTCTTATGGAGTCCCAGAGGATACACAGCCCCTCCCGC-GGCCATGCAGCCAGCCGGTGGGGAATCCACAACCAGAACCCGGCTTTCTTGAG--------------------------------ATCTGACCGGAGGCCCCCA-GGAGAACACCCAGTCAGTTGCTCTGTGCTGACCAGGCTGTGTTCCCGCTGTGGTCAGAGCAGCTCCAC i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170332969 187 + 172585720 ACCCAGTTTTCTCATGGATTCCCAGAGGATACACAGCCCCTCCCGC-AGACATGCAGCCAGCCGGTGGGGAAGCAACAATAAGAACCTGACTTCCTTGAG--------------------------------ATCTGACCAGAGGCCTCCAGGGAGAACACCCAACCAGTTGCTCTGCGCTGACCAGGCTGTGTTCCCGGTGGGGTCCGAGCAGCTCCAT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169078534 187 - 170955103 ACCCAGTTTTCTCATGGATTCCCAGAGGATACACAGCCCCTCCCGC-AGACATGCAGCCAGCCGGTGGGGAAGCAACAATAAGAACCTGACTTCCTTGAG--------------------------------ATCTGACCAGAGGCCTCCAGGGAGAACACCCAACCAGTTGCTCTGCGCTGACCAGGCTGTGTTCCTGGTGGGGTCCGAGCAGCTCCAT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8364907 187 + 10161646 ACCCCGTTTTCTCATGGATTCCCAGAGGATACACAGCCCCTCCCGC-AGACATGCAGCCAGCCGGGGGGGAAGCAACAATAAGAACCTGACTTCCTTGAG--------------------------------ATCTGACCGGAGGCCTCCAGGGAGAACACCCAGCCAGTTGCTCTGCGCTGACCAGGCTGTGTTCCCGGTGGGGTCCGAGCAGCTCCAT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1396029 187 + 3144229 ACCCAGTTTTCTCATGGATTCCCAGAGGATACACAGCCCCTCCCGC-AGACACGCAGCCAGCCGGTGGGGAAGCAACAATAAGAACCTGACTTCCTTGAG--------------------------------ATCTGACCGGAGGCCTCCAGGGAGAACACCCAGCCAGTTGCTCTGCGCTGACCAGGCTGTGTTCCCGGTGGGGTCCGAGCAGCTCCAT i cerAty1.NW_012002071v1 I 329 C 0 s chlSab2.chr13 96683465 187 + 98384682 ACCCAGTTTTCTCATGGATTCCCAGACGATACACAGCCCCTCCCGC-AGACATGCAGCCAGCCGGTGGGGAAGCAACAATAAGAACCTGACTTCCTTGAG--------------------------------ATCTGACCGGAGGCCTCCAGGGAGAACACCCAGCCAGTTGCTCTGCGCTGACCAGGCTGTGTTCCCGGTGGGGTCCGACCAGCTCCAT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8219622 187 - 10857215 ACCCAGTTTTCTCATGGATTCCCAGAGGATACACAGCCCCTCCCGC-AGACATGCAGCCAGCCGGTGGGGAAGCAACAATAAGAACCTGACTTCCTCGAG--------------------------------ATGTGACCGGGGACCTCCAGGGAGAACACCCAGCCAGTTGCTCTGCGCTGACCAGGCTGTGTTCCCGGTGGGGTCCGAGCAGCTCCAT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15612223 187 - 23502949 ACCCAGTTTTCTCATGGATTCCCAGAGGATACACAGCCCCTCCCGC-AGACATGCAGCCAGCCGGTGGGGAAGCAACAATCAGAACCTGGCTTTCTTGAG--------------------------------ATCTGACCAGAGGCCTCCAGGGAGAACACCCAGCCAGCTGCTCTGCACTGACCAGGCTGTGTTCCCGGTGGGGTCCGAGCAGCTCCAT i colAng1.NW_012114488v1 I 6 C 0 s calJac3.chr4 169886580 163 + 171630274 ACC--GTTTTCTCCTGGAGCCCCAGAGGATTCACAGCACCTCCCACGGGCTACACAG-CAGCCTTCCAGGAGGCAGCGACCAGAACCCGGCTTTCTCCAG----------------------------------------------------GGACAACACCC-GCCAGCTGCTCCATGCGGGCT-GACTGTGCTCCCGGTGTGGCTGGAGCAGCTCCAG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1294338 185 - 2905041 ACCCGGTATTCTCATGGAGTCCCAGAGGATTCACTGCGCCTCCCAC-AGCCATGCAGCCAGCCTGCGGGGAAGCAGCAACCAGAACACGGCTTTCTTCAG--------------------------------ACCCGACCAGAGGCCTCCA-GGAGAATACCG-GGCAGCTGCTCCGCGCAGGCCAGGCTGTGTTCCCGGTGTGGCTGGAGCAGCTCCAG i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1252146 184 - 2164891 ACCCAGTATTCTCATGGAGCCCCGGAAGATCCACCGCGCCTCCCAC-AGCCATGCAGCCAGCCGGCCGGGAAGCAGCAACCAGAACCCGGCCTTCTTCAC--------------------------------ACCCGACCGGGGGCCTCCAGGGAGAACACCG-GCCAGCTGCTCC--GCGGGCCAGGCTGTGTTCCCGCTGTGGCCGGAGCAGCTCCGG i cebCap1.NW_016107695v1 C 0 C 0 s otoGar3.GL873575 10949718 154 - 12073884 GTCCCGTCCTCT-GGGGCACCCCAGGGGATGAA--ACTCCCCTTAC-AGTGACTCATCCCATCAACAGTCAAACAAGAACCAACATCCCAGTTTCCTGAG--------------------------------ATCTGACC-----TCTGCG--------TCCGGGCTGGCCACTCTGTGTGGACCAGGCTGGGTTCCTCACGG----------------- i otoGar3.GL873575 C 0 C 0 s dasNov3.JH569188 572243 203 + 760995 ATTCTCTTTCCCCACGGA-------AAGATA---ACCCCCTcccaa-aatgattcaactggttaatggcaaagcacgaagcagaacccaggtttcccgaAACATCTCTGGCTTCTGATGTGGTGTCTAATTCATCTGTTTAGAGGCCCTTC-AGAGATTAT---AAAAGCCATTCCACCCTAATCAGTCTGTTTTCTTAACAAAATCAGCATAACCAC-- i dasNov3.JH569188 C 0 C 0 e aotNan1.NW_018494782v1 1504890 3467 - 1813869 I e canFam3.chr1 56173082 6728 + 122678785 I e nomLeu3.chr3 156303499 1062 + 157873769 M a score=476158.000000 s hg38.chr6_KB021644v2_alt 106119 55 + 185823 CCAGCACAGCTTTCCGCTTCCCTTTGCAGGGACAGAGCACCTGAGTTGCAGGTGC s panTro5.chr6 173557210 55 + 175400573 CCAGCACAGCTTTCCGCTTCCCTTTGCAGGGACAGAGCACCTGAGTTGCAGGTGC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171796276 55 + 173848474 CCAGCACAGCTTTCCGCTTCCCTTTGCAGGGACAGAGCACCTGAGTTGCAGGTGC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11478750 55 - 12463322 CCAGCACAGCTTTCCGCTTTCCTTTGCAGGGACAGAGCACCTGAGTTGCAGGTGC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156304562 55 + 157873769 CCAGCACAGCTTTCTGCTTCCCTTTGCAGGGACAGAGCACCTGAGCTGCAGGTGC i nomLeu3.chr3 M 1062 C 0 s rheMac8.chr4 170333156 55 + 172585720 CCAGCACAGCTTTCCGCTTCCGTTTGCAGGGACAGAGCACCTGAGCTGCAGGTGC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169078721 55 - 170955103 CCAGCACAGCTTTCCGCTTCCGTTTGCAGGGACAGAGCACCTGAGCTGCAGGTGC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8365094 55 + 10161646 CCAGCACAGCTTTCCGCTTCTGTTTGCAGGGACAGAGCACCTGAGCTGCAGGTGC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1396216 55 + 3144229 CCAGCACAGCTTTCCGCTTCCCTTTGCAGGGACAGAGCACCTGAGCTGCAGGTGC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96683652 55 + 98384682 CCAGCACAGCTTTCCGCTTCCCTTTGCAGGGACAGAGCACCTGAGCTGCAGGCGC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8219809 55 - 10857215 CCAGCACAGCTTTCCGCTTCCGTTTGCAGGGACAGAGCACCTGAGCTGCAGGTGC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15612410 55 - 23502949 CCAGCACAGCTTTCTGCTTCCCTTTGCAGGGACTGAGCACCTGAGTTGCAGGTGC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169886743 38 + 171630274 GGGGCACAGCTTTCCACGTCCCTCTGCAGGGACAGAGC----------------- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1294523 54 - 2905041 GCGGGACAGATTTCCACGTCCCTCTGTAGGCACAGAGC-CTTGAGCTGCAGGTGC i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1252330 54 - 2164891 GCGGTACAGCTTTCCACGTCCCTCTGCAGGCACGGAGC-CTTGAGCTGCAGGTGC i cebCap1.NW_016107695v1 C 0 I 6667 s otoGar3.GL873575 10949872 54 - 12073884 TCACCATGGCCATCTGC-TCCCTTTGCCAGCATGAAGCCCTGGAGTGTCAGGTGC i otoGar3.GL873575 C 0 C 0 s dasNov3.JH569188 572446 55 + 760995 CCACCACAAATTCCTCCTACCTATTGGAAGGACAAAGCAATCACATCGCAGGTGC i dasNov3.JH569188 C 0 C 0 e aotNan1.NW_018494782v1 1504890 3467 - 1813869 I e canFam3.chr1 56173082 6728 + 122678785 I a score=1526936.000000 s hg38.chr6_KB021644v2_alt 106174 247 + 185823 TTAAGCGAGCA-GCCGATT-ACTTTTTCTTGTAAGAA----------------------------------------------------------------------------------CAG-GCGTGGATGCATTTCCACATGGCTGTCC-TC--CCCACGTCTCTGTGGACT-TACAATGCACGGCTGTCATGT-------------TTACTTTCAGCTCATGGGGCACGTTCCACACCGTCATCATA----CTTGGTTATTTCCATTTGATTAT--------GGAATGTTGTACCAGAGCAATGTTGTACTAAAGTTTTTAA-GTGAAGTACTGA-GCGGGCAATTCT----CCAATAGAAGGA s panTro5.chr6 173557265 247 + 175400573 TTAAGTGAGCA-GCCGACT-ATGTGTTCTTGTAAGAA----------------------------------------------------------------------------------CAG-GCATGGATGCATTTCTACATGGCTGTCC-TC--CCCACATCTCTGTGGACT-TACAATGCACGGCTGTCATGT-------------TTACTTTCAGCTCGTGGGGCACGTTCCACACCGTCATCATA----CTCGGTTATTTCCATTTGATTAT--------GGAATGTTGTACCAGAGCAATGTTGTACTAAAGTTTTTAA-GTGAAGTACTGA-GCGGGCAATTCT----CCAATAGAAGGA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171796331 247 + 173848474 TTAAGTGAGCA-GCCGACT-ATGTGTTCTTGTAAGAA----------------------------------------------------------------------------------CAG-GCATGGATGCATTTCTACATGGCTGTCC-TC--CCCACATCTCTGTGGACT-TACAATGCACGGCTGTCATGT-------------TTACTTTCAGCTCGTGGGGCACGTTCCACACCGTCATCATA----CTCGGTTATTTGCATTTGATTAT--------GGAATGTTGTACCAGAGCAATGTTGTACTAAAGTTTTTAA-GTGAAGTACTGA-GCGGGCAATTCT----CCAATAGAAGGA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11478805 247 - 12463322 TTAAGCGAGCA-GCCGACT-ACTTGTTCTTGTAAGAA----------------------------------------------------------------------------------CAG-GCGTGGATGCATTTCCACATGGCTGTCC-TC--CCCACGTCTCTGTGGACT-TACAATGCACGGCTGTCATGT-------------TTACTTTCAGCTCGTGGGGCACGTTCCACACCGTCATCATA----CTCGGTTATTTCCATTTGATTAT--------GGAATGTTGTACCAGAGCAATGTTGTACTAAAGTTTTTAA-GTGAAGTACTGA-GCAGGCAATTCT----CCAATAGAAGGA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156304617 247 + 157873769 TTAAGTGAGCA-GCTGACT-ACTTGTTCTTCTAAGAA----------------------------------------------------------------------------------CAG-GCATCGATGCGTTTCTACATGGCTGTCC-TC--CCCATGTGTCTGTGGGCT-TACAATGCACGGCTATCATGT-------------TTACTTTCAGCTCGTGGGGCACGTTCCACACCATCATCATA----CTCGGTTATTTCCATTTGATTAT--------GGAATGTTGTCCCAGAGCAATGTTGTACTAAAGTTTTTAA-GTGAAGCACTGA-GCGGGCAATTCT----CCAACAGAAGGA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170333211 229 + 172585720 TTaagtgagca-gccgact-acgtgttcttgtaagaa----------------------------------------------------------------------------------cag-gcatcgatgtatttctgcatggctGTCC-TC--CCCACGTCTC--TTGGCT-TACCACGCACAGCTATCATGT-------------TTACTTTCAGCTCCTGGGGCACGTTCCTCACCGTCATCATA----CTCAGTTATTTCCATTTGATTAT--------GGAATGTTGTACC----------------AAAGTTTTTAA-GTGAAGCACTGA-GCGGAAAATTCT----CCAAGAGAAGGA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169078776 231 - 170955103 TTAAGTGAGCA-GCCGACT-ACGTGTTCTTGTAAGAA----------------------------------------------------------------------------------CAG-GCATCGATGTAGTTCTGCATGGCTGTCC-TC--CTCACATCTCTGTGGGCT-TACCATGCACAGCTATCATGT-------------TTACTTTCAGCTCCTGGGGCACGTTCCTCACCATCATCATA----CTCAGTTATTTCCATTTGATTAT--------GGAATGTTGTACC----------------AAAGTTTTTAA-GTGAAGCACTGA-GTGGGCAATTCT----CCAAGAGAAGGA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8365149 231 + 10161646 TTaagtgagca-gccgact-acgtgttcttgtaagaa----------------------------------------------------------------------------------cag-gcatcgatgtatttctgcatggctGTCC-TC--CCCACGTCTCCGTGGGCT-TACCACGCACAGCTATCATGT-------------TTACTTTCAGCTCCTGGGGCACGTTCCTCACCGTCATCATA----CTCAGTTATTTCCATTTGATTAT--------GGAATGTTGTACC----------------AAAGTTTTTAA-GTGAAGCACTGA-GCGGGCAATTCT----CCAAGAGAAGGA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1396271 231 + 3144229 TTaagtgagca-gccgact-acgtgttcttgtaagaa----------------------------------------------------------------------------------cag-gcatcgatgtatttctgcatggctGTCC-TC--CCCACGTCTCTGTGGGCT-TACCATGCACAGCTATCATGT-------------TCACTTTCAGCTCCTGGGGCACGTTCCTCACTGTCATCATA----CTCAGTTATTTCCATTTGATTAT--------GGAATGTTGTACC----------------AAAGTTTTTAA-GTGAAGCACTGA-GCGGGCAATTCT----CCAAGAAAAGGA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96683707 231 + 98384682 TTAAGTGAGCA-GCCGACT-ACGTGCTCTGGCAAGAA----------------------------------------------------------------------------------CAG-GCATCGATGTATTTCTGCATGGCTGTCC-TC--CCCACGTCTCTGTGGGCT-TACAATGCACAACTATCATGT-------------TTACTTTCAGCTCCTGGGGCACGTTCCTCACCATCATCATA----CTCGGATATTTCCATTTGATTAT--------GGAATGTTGTACC----------------AAAGTTTTTAA-GTGAAGCACTGA-GCAGGCAATTCT----CCAATAGAAGGA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8219864 231 - 10857215 TTAAGTGAGCA-GCCGACT-ATGTGTTCTTGCAAGAA----------------------------------------------------------------------------------CAG-GCATCGATGTATTTCTGCATGGCTGTCC-TC--CCCACGTCTCTGTGGGCT-TACCATGCACAGCTATCATGT-------------TTACTTTCAGCTCCCGGGGCACGTTCCTCACCGTCATCATA----CTCAGTTATTTCCATTTGATTAT--------GGAATGTTGTACC----------------AAAGTTTTTAA-GTGAAGCACTGA-GCAGGCAATTCT----CCAAGAAAAGGA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15612465 231 - 23502949 TTAAGTGAGCA-GCCGACT-ACGTGTTCTTGTAAGAA----------------------------------------------------------------------------------CAG-GCAACGATGTATTTCTACATGGCTGTCC-TC--CCCACGTCTCTGTGGGCT-TACAATGCACAGCTATCATGT-------------TTACTTTCAGCTCCTGGGGCACGTTCCTCACCGTCATTATA----CTCGGTTATTTCCATTTGATTAT--------GGAATGTTGTATC----------------AAAGATTTTAA-GTGAAGCACTGA-GCGGGCAATTCT----CCAATAGAAGGA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169886781 226 + 171630274 ---CCTGAGCA-GCCT-CT-CCAGGCTCCTGTGAGCG----------------------------------------------------------------------------------CGG-GCCT-GACGGGGTTCTGCATTGCCGTCC-GCCGCCCACGTAGCTGTGGAAT-GACCATGCACAGCTATGGCAT-------------TTACCTTCAGCTAATAGGGTGCGCTCA---------------------GGTTACATCCATTTCATTAT--------GGAATGTCGGAGCACAGCACTGCCCTGCCGAGGTGTTTAA-CTAAAGCACTGA-GGGGGCAATTCT----CTAATAGAAAG- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1294577 328 - 2905041 GTACCTGAGCA-GCCT-CT-CCAGGTTCCTGTAAGCGCCAGCGTGGTGTGGTTCTACCCCGAGCACAGCGTGAGGGGTTCTAAGGTGGGCACAGGCCTGATGCTGTCCTACACCCAGCACCA-GCCT-GACACGGTTCTTCATTGCTGTCC-CCCACCCACGTCGCTGTGGGCT-GACCATGCACAGTGATGGTGT-------------TTACCTTCAGCTAATGGGGTGCGCTCAT-GCTGCCATGATA----CTCTGTTACATCCATTTCGTTAT--------GGAATGTCGGACCAGAACAGTG-CATGCCAAGGTGTTTAAGGCGGGGCACGGAGGGGGGCAATTCT----CTAATAGAAAG- i saiBol1.JH378287 C 0 C 0 s otoGar3.GL873575 10949926 230 - 12073884 -TCCATGAGCT-CCAGGAT-CGGTGCTCTTTGGGGCA----------------------------------------------------------------------------------GAG-GCACGGATGGTTTTCTGTATTTCTGTCC-TC--CCCACATCTCTATGCGCTGCAAGATGCGTGGCTATAATTTTT---------CATTAATTTCAGCTCGCAGGGCACTTTCCACTGAGTCATCAT------TTGGTTATTTCCATTTGATTATTC-CTTGAGCAGTATCATATC-----------------AAGTGTTTTA-ATGAGGTGTAAG-GTAGACACTTCT-----------AAG-- i otoGar3.GL873575 C 0 C 0 s dasNov3.JH569188 572501 263 + 760995 TTAAGTTAGCACATCAGCTAAAATGTTCTTGTGAGAC----------------------------------------------------------------------------------CAGAGCTAGAATAAATATTCATATTATTGTTCATC--TCCACATCTTTGTGGGCT-GAAATTACATGCCTATAATTTTTAAAGGAGACCATTAATTTCAGTTCATAAGTCACATTCCACAC-ATATTCATAATTTTTTCATTACTTCCACTTGATTATTTGCCAAAGCAATATCATACC----------------AACCATTTTTA-GAGAAGTACTGA-GGAGACAATTCTCACTCTATTAGAAAGA i dasNov3.JH569188 C 0 C 0 e aotNan1.NW_018494782v1 1504890 3467 - 1813869 I e cebCap1.NW_016107695v1 1252384 6667 - 2164891 I e canFam3.chr1 56173082 6728 + 122678785 I a score=227541.000000 s hg38.chr6_KB021644v2_alt 106421 26 + 185823 AAATATCCACACTAAGAA-----GAGAGAGA s panTro5.chr6 173557512 26 + 175400573 AAATATCCACACTAAGAA-----GAGAGAGA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171796578 26 + 173848474 AAATATCCACACTAAGAA-----GAGAGAGA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11479052 25 - 12463322 AAATATCCACATTAAGAA------AGAGAGA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156304864 26 + 157873769 AAATATCCGCACGAAGAA-----GAGAGAGA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170333440 26 + 172585720 AAATATCCACACTAAGAA-----GAGAGAGA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169079007 26 - 170955103 AAATATCCACACTAAGAA-----GAGAGAGA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8365380 26 + 10161646 AAATATCCACACTAAGAA-----GAGAGAGA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1396502 26 + 3144229 AAATATCCACACTAAGAA-----GAGAGAGA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96683938 26 + 98384682 AAATATCCATACTAAGAA-----GAGAGAGA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8220095 26 - 10857215 AAATATCCATACTAAGAA-----GAGAGAGA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15612696 26 - 23502949 AAATATACATACTAAGAA-----GAGAGAGA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169887007 25 + 171630274 AAATGCCCACACTGAGAA-----GAGAGGA- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1294905 26 - 2905041 AAATACCCACACTGAGAA-----GAAAGGAA i saiBol1.JH378287 C 0 I 78 s aotNan1.NW_018494782v1 1508357 26 - 1813869 AAACATCCACACTGAGAA-----GAGAGAGG i aotNan1.NW_018494782v1 I 3467 C 0 s otoGar3.GL873575 10950156 13 - 12073884 -------------AAGCA-----AAGAGAGA i otoGar3.GL873575 C 0 C 0 s dasNov3.JH569188 572764 31 + 760995 AAATATTTATATTATGAAGTAAAGAGAGAGA i dasNov3.JH569188 C 0 C 0 e cebCap1.NW_016107695v1 1252384 6667 - 2164891 I e canFam3.chr1 56173082 6728 + 122678785 I a score=159704.000000 s hg38.chr6_KB021644v2_alt 106447 13 + 185823 AAATCTACAGGGA s panTro5.chr6 173557538 13 + 175400573 AAATCTACAGGGA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171796604 13 + 173848474 AAATCTACAGGGA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11479077 13 - 12463322 AAATCTACAGGGA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156304890 13 + 157873769 AAATCTACAGGGA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170333466 13 + 172585720 AAATCTACAGGGA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169079033 13 - 170955103 AAATCTACAGGGA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8365406 13 + 10161646 AAATCTACAGGGA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1396528 13 + 3144229 AAATCTACAGGGA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96683964 13 + 98384682 AAATCTACAGGCA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8220121 13 - 10857215 AAATCTACAGAGA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15612722 13 - 23502949 AAATCTACAGGGA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169887032 12 + 171630274 -AATCCACAGGGA i calJac3.chr4 C 0 I 1333 s saiBol1.JH378287 1295009 13 - 2905041 GAATCCACAGGGA i saiBol1.JH378287 I 78 C 0 s cebCap1.NW_016107695v1 1259051 13 - 2164891 AAATCCACAGGGA i cebCap1.NW_016107695v1 I 6667 C 0 s aotNan1.NW_018494782v1 1508383 13 - 1813869 GAATCCACAGGGA i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10950169 13 - 12073884 AAATCTACAAGGG i otoGar3.GL873575 C 0 C 0 s dasNov3.JH569188 572795 13 + 760995 GAATCTGCAGGGG i dasNov3.JH569188 C 0 C 0 e canFam3.chr1 56173082 6728 + 122678785 I a score=735118.000000 s hg38.chr6_KB021644v2_alt 106460 92 + 185823 CATTGAAGTGGTTGAGACCTCAAAATGGTT-TTAACTTTCTT----AAA---AGCCCATCTGAGACAAGAAAACATTTCTAAGCACTTAAGATGTAATGA s panTro5.chr6 173557551 92 + 175400573 CATTGAAGTGGTTGAGACCTAAAAATGGTT-TTAACTTTCTT----AAA---AGCCCATCTGAGACAAGAAAACATTTCTAAGCACTTAAGATGTAATGA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171796617 92 + 173848474 CATTGAAGTGGTTGAGACCTAAAAATGGTT-TTAACTTTCTT----AAA---AGCCCATCTGAGACAAGAAAACATTTCTAAGCACTTAAGATGTAATGA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11479090 92 - 12463322 CATTGAAGTGGTTGAGACTTCAAAATGGTT-TTAACTTTCTT----AAA---AGCCCATCTGAGACAAGAAAACATTTCTAAGCACTTAAGATGTAATGA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156304903 92 + 157873769 CGTTGAAGTGGTTGAGACCTCAAAATGGTT-TTAACTTTCTT----AAA---AGCCCATCTGAAACAAGAAACCATTTCTAAGCACTTAAGATGTAATGA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170333479 91 + 172585720 CAGGGAAGTGGTTGCGACCTCAACATAGCT-TTAACTTTCTT----GAA---AGCCCATCTGAAACAAG-AAACATTTCTAAGCACTTAAGATGTAAAGA i rheMac8.chr4 C 0 I 6 s macFas5.chr4 169079046 91 - 170955103 CAGGGAAGTGGTTGCGACCTCAACATAGCT-TTAACTTTCTT----GAA---AGCCCATCTGAAACAAG-AAACATTTCTAAGCACTTAAGATGTAAAGA i macFas5.chr4 C 0 M 144 s macNem1.NW_012011000v1 8365419 91 + 10161646 CAAGGAAGTGGTTGCGACCTCTACATAGCT-TTAACTTTCTT----GAA---AGCCCATCTGAAACAAG-AAACATTTCTAAGCACTTAAGATGTAAAGA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1396541 91 + 3144229 CAGTGAAGTGGTTGAGACCTCAACATGGTT-TTAACTTTCTT----AAA---AGCCCATCTGAAACAAG-AAACATTTCTAAGCACTTAAGATGTAATGA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96683977 79 + 98384682 CAGTGAAGTGGTTGAGACCTCAACATGGTT-TTAACTT--------------------TCTGAAACAAGAAAACATTTCTAAGCACTTAAGATGTAATGA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8220134 92 - 10857215 CAGTGAAGTGGTTGAGACCTCAACATGGTT-TTAACTTTCTT----AAA---AGCCCATCTGAAACAAGAAAACATTTCTAAGCACTTAAGATGTAAAGA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15612735 92 - 23502949 CAGTGAAGTGGTTGAGACCTCAACATGGTT-TTAACTGTCTT----AAG---AGCCCATCTGAAACAAGAAAACATTTCTAAGCACTTAAGATGTAATGA i colAng1.NW_012114488v1 C 0 C 0 s saiBol1.JH378287 1295022 95 - 2905041 CGGTGAAGTGGCTGAGACCTCAAAATGGTT-TCAGCTTCCGTAAA-AAA---AGCCCATCTGAAGTAAGAAGGCATTTCTAATTTCTCAAGCTGTCAGCA i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1259064 96 - 2164891 CAGTGAAGTGGCTGAGACCTCAAAATGGTT-TCAACTTCCTTAAACAAA---AGCCCATCTGAATTAAGAAAGCATTTCTAATTTGTCAAGCTGTCATGA i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1508396 96 - 1813869 CAGTAAAGTGACTGAGACCTCAAAATAGTT-TCAAGTTCCTTAAACAAA---AGCCCATCTGAAATAAGAAAAGATTTCTAATTTCTCAAGCTGTCATGA i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10950182 95 - 12073884 CATTGAAGTGGTTGGAAACTAAAATTAGTTCTTAACTTTCTT----AAACACAACTCATCTAAAGCAAGGAAACGTGTTTAGGT-CCAAAGACATTAAGC i otoGar3.GL873575 C 0 I 1 s dasNov3.JH569188 572808 81 + 760995 CATTGTTGTGGTTGAGAATTAAAACTGGCT-----CTTTCTT-----AA---AGCCCATCTGAAACAA--AAACATTTTTAAGCATGTAGGGTGTA---- i dasNov3.JH569188 C 0 C 0 e calJac3.chr4 169887044 1333 + 171630274 I e canFam3.chr1 56173082 6728 + 122678785 I a score=10500.000000 s hg38.chr6_KB021644v2_alt 106552 1 + 185823 G s panTro5.chr6 173557643 1 + 175400573 G i panTro5.chr6 C 0 C 0 s panPan2.chr6 171796709 1 + 173848474 G i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11479182 1 - 12463322 G i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156304995 1 + 157873769 G i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170333576 1 + 172585720 G i rheMac8.chr4 I 6 C 0 s macNem1.NW_012011000v1 8365510 1 + 10161646 G i macNem1.NW_012011000v1 C 0 I 18 s cerAty1.NW_012002071v1 1396632 1 + 3144229 G i cerAty1.NW_012002071v1 C 0 I 1 s chlSab2.chr13 96684056 1 + 98384682 G i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8220226 1 - 10857215 G i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15612827 1 - 23502949 G i colAng1.NW_012114488v1 C 0 C 0 s saiBol1.JH378287 1295117 1 - 2905041 G i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1259160 1 - 2164891 G i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1508492 1 - 1813869 G i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10950278 1 - 12073884 G i otoGar3.GL873575 I 1 I 2 e calJac3.chr4 169887044 1333 + 171630274 I e dasNov3.JH569188 572889 0 + 760995 C e canFam3.chr1 56173082 6728 + 122678785 I e macFas5.chr4 169079137 144 - 170955103 M a score=-12297.000000 s hg38.chr6_KB021644v2_alt 106553 9 + 185823 CAGGGCGT-T- s panTro5.chr6 173557644 9 + 175400573 CAGGGCGT-T- i panTro5.chr6 C 0 C 0 s panPan2.chr6 171796710 9 + 173848474 CAGGGCAT-T- i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11479183 9 - 12463322 CAGGGCGT-T- i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156304996 9 + 157873769 CAGGGCGT-T- i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170333577 8 + 172585720 GGGGGGGG--- i rheMac8.chr4 C 0 I 1 s cerAty1.NW_012002071v1 1396634 8 + 3144229 AGGGGGGG--- i cerAty1.NW_012002071v1 I 1 I 1 s chlSab2.chr13 96684057 8 + 98384682 CGGGGGGG--- i chlSab2.chr13 C 0 I 1 s manLeu1.NW_012106474v1 8220227 8 - 10857215 CAGGGGGG--- i manLeu1.NW_012106474v1 C 0 I 2 s colAng1.NW_012114488v1 15612828 9 - 23502949 CGGGGGGGT-- i colAng1.NW_012114488v1 C 0 C 0 s saiBol1.JH378287 1295118 8 - 2905041 CAGGGGTG--- i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1259161 8 - 2164891 CAGGGGTG--- i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1508493 8 - 1813869 CAGGGGTG--- i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10950281 7 - 12073884 CGGTACT---- i otoGar3.GL873575 I 2 C 0 s dasNov3.JH569188 572889 2 + 760995 ---------TT i dasNov3.JH569188 C 0 C 0 e calJac3.chr4 169887044 1333 + 171630274 I e canFam3.chr1 56173082 6728 + 122678785 I e macNem1.NW_012011000v1 8365511 18 + 10161646 I e macFas5.chr4 169079137 144 - 170955103 M a score=1835806.000000 s hg38.chr6_KB021644v2_alt 106562 222 + 185823 TGTAATTTGTTACACTTATTTTCTAAGTTTAACAAAGTGACTAAATATTGTCTATGTCTTTCTAATTTCCATAAAATAAC--TGTTATGAAATGGAAATATGTTCTTT---------------TAAAAAAA-----CATCC----GAATGTTCGATCCATTTCCCTCACTAATGTGGGGTTGACAGCCGAG--TGGTTGGGCGAGGTGTGCCCTGCAAACTAAGGTGGATGGAGACATTCAG--C-aa-cattt s panTro5.chr6 173557653 224 + 175400573 TGTAATTTGTTACACTTATTTTCTAAGTTTAACAAAGTGACTAAATATTGTCTATGTCTTTCTAATTTCCATAAAATAAC--TGTTATGAAATGGAAATATGTTCTTT---------------TAAAAAAA-----CATCT----GAATGTTCGATCCGTTTCCCTCACTAATGTGGGGTTGACAGCCGAG--TGGCTGGGTGAGGTGTGCCCTGCAAACTAAGGTGGATGGagacattcagaac-aa-cattt i panTro5.chr6 C 0 C 0 s panPan2.chr6 171796719 224 + 173848474 TGTAATTTGTTACACTTATTTTCTAAGTTTAACAAAGTGACTAAATATTGTCTATGTCTTTCTAATTTCCATAAAATAAC--TGTTATGAAATGGAAATATGTTCTTT---------------TAAAAAAA-----CATCT----GAATGTTCGATCCGTTTCCCTCACTAATGTGGGGTTGACAGCCGAG--TGGCTGGGTGAGGTGTGCCCTGCAAACTAAGGTGGATGGagacattcagaac-aa-cattt i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11479192 224 - 12463322 TGTAATTTGTTACACTTATTTTCTAAGTTTAACAAAGTGATTAAATATTGTCTATGTCTTTCTAATTTCCATAAAATAAC--TGTTATGAAATGGAAATATGTTCTTT---------------TAAAAAAA-----CATCT----GAATGTTCGATCTGTTTCCCTCACTAATGTGGGGTTGACAGCCGAG--TGGCTGGGCGAGGTGTGCCCTGCAAACTAaggtgggtggagacattcagaac-aa-cattt i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156305005 224 + 157873769 TGTAATTTGTTACACTTATTTTCTAATTTTAACAAAGTGACTAAATATTGTCTATGTCTTTCTAATTTCCATAAAATAAC--TGTTATGAAATGGAAATATGTTCTTT---------------TAAAAAAA-----CATCT----GAATGTTCGATCCGTTTCCCTCACTAATGTGGGGTTGAGAGCCGAG--TGGCTGGGCGAGGTGTGCCCTGCAAACTAaggtgggtggagacattcagaac-aa-cattt i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170333586 226 + 172585720 TGTAATTTGTTACACTTATTTTCTAATTTTAACAAAGTGGCTAAATATTGTCTATGTCTTTCTAATTTCCATAAAATAACTATGTTATGAAATGGAAATATGTTTTTT---------------TAAAAAAT-----CATCT----GACTGTTCCATCCGTTTCCCTCACTGACGTGGGGTTGAGAGCCGAG--TGGCTGGGCGAGGTGTGCCCTGCAAACTAaggtgggtggagacattcagaac-aa-catgt i rheMac8.chr4 I 1 C 0 s macFas5.chr4 169079283 226 - 170955103 TGTAATTTGTTACACTTATTTTCTAATTTTAACAAAGTGGCTAAATATTGTCTATGTCTTTCTAATTTCCATAAAATAACTATGTTATGAAATGGAAATATGTTTTTT---------------TAAAAAAT-----CATCT----GACTGTTCCATCCGTTTCCCTCACTGACGTGGGGTTGAGAGCCGAG--TGGCTGGGCGAGGTGTGCCCTGCAAACTAaggtgggtggagacattcagaac-aa-catgt i macFas5.chr4 M 144 C 0 s macNem1.NW_012011000v1 8365529 226 + 10161646 TGTAATTTGTTACACTTATTTTCTAATTTTAACAAAGTGGCTAAATATTGTCTATGTCTTTCTAATTTCCATAAAATAACTATGTTATGAAATGGAAATATGTTTTTT---------------TAAAAAAT-----CATCT----GACTGTTCCATCCGTTTCCCTCACTGACGTGGGGTTGAGAGCCGAG--TGGCTGGGCGAGGTGTGCCCTGCAAACTAaggtgggtggagacattcagaac-aa-catgt i macNem1.NW_012011000v1 I 18 C 0 s cerAty1.NW_012002071v1 1396643 226 + 3144229 TGTAATTTGTTATACTTACTTTCTAATTTTAACAAAGTGGCTAAATATTGTCTATGTCTTTCTAATTTTCATAAAACAACTATGTTATGAAATTGAATTATGTTTTTT---------------AAAAAAAT-----CATCT----GACTATTCGATCCGTTTCCCTCACTGATGTGGGGTTGAGAGCCGAG--TGGCTGGGCGAGGTGTGCCCTGCAAACTAaggtgggtggagacactcagaac-aa-catgt i cerAty1.NW_012002071v1 I 1 C 0 s chlSab2.chr13 96684066 226 + 98384682 TGTAATTTGTTATACTTATTTTCTAATTTTAACAAAGTGGCTAAATATTGTCTATGTCTTTCTAATTTCCACAAAATAACTATGTTATGAAATGGAAATATGTTTTTT---------------TAAAAAAT-----CATCT----GACTGTTCGATCCGTTTCCCTCACTGATGTGGGGTTGAGAGCCGAG--TGGCTGGGCGAGGTGTGCCCTGCAAACTAaggtgggtggagacattcagaac-aa-catgt i chlSab2.chr13 I 1 C 0 s manLeu1.NW_012106474v1 8220237 225 - 10857215 TGTAATTTGTTACACTTATTTTCTAATTTTAACAAAGTGGCTAAATATTGTCTATGTCTTTCTAATTTCCATAAAATAACTATGTTATGAAATGGAAATAT-TTTTTT---------------TAAAAAAT-----CATCT----GGCTATTCGATCCGTTTCCCTCACTGATGTGGGGTTGAGAGCCGAG--TGGCTGGGCGAGGTGTGCCGTGCAAACTAaggtgggtggagacactcagaac-aa-catgt i manLeu1.NW_012106474v1 I 2 C 0 s colAng1.NW_012114488v1 15612837 226 - 23502949 TGTAATTTGTTATACTTATTTTCTAATTTTAACAAAGTGGCTAAATATTGTCTATGTCTTTCTAATGTCCATAAAATAACTATGTTATGAAATGGAAATATGTTTTTT---------------TAAAAAAT-----CATCT----GACTGTTCGATCCGTTTCCCTCACCGATGTGGGGTTGAGAGCCGAG--TGGCTGGGCGAGGTGTGCCCTGCAAACcaaggtgggtggagacattcagaac-aa-cgtgt i colAng1.NW_012114488v1 C 0 C 0 s saiBol1.JH378287 1295126 208 - 2905041 TGTAG-TTGCTACGCTTATTTTCTAATTCTAACAAAGTGGCTAAATATCA--TCTGTCTTTCTAATTTCCATAAAG----TATGTTACAAAATGGAAA-------ATT---------------TTACAAAT-------TTT----GAATGTTCCATGCATTTCCCTCACCAATGTGGGGTTGGGAGCAGCA--TGGCT-GGCGAGGCGTGCC-TGCAAAGGAAGGTGGGCAGAGTCATTCAGAAC-AA-CATGT i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1259169 219 - 2164891 TGTAA-TTGCTCCACTTATTTTCTAATTTTAACAAAGTGGCTAAATATCG--TCTGTCTTTCTAATTTCCATAAAGTAACTACGCTACAAAATGGAAA-------ATT---------------TAAAAAATATGTATGTTT----GAATGTTCCATGCATTTCCCTCACCAATGTGGGACTGGGAGCTGCA--TGGCT-GGCGAGGCGTGCC-TGCAAAGGAAGGTGGGCAGAGCCattcagaac-aa-catgt i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1508501 217 - 1813869 TGTAA-TTCCTACACTTATTTTCTAATTTTAAGACAGTGGCTAAAAATC---TATGTCTTTTTAATTTCCATAAAGTAACTATGTTACAAAATGAAAA-------ATT---------------T-AAAAGTATATATATCT----GAATGTTCCATGCATTTCCCTCTCCAATGTGGGCTTGGGAGCCGCG--TGGCT-GGCGAGGCGTGCC-TGCAAAGGAGGGTGGGTGGAGTCATTCAGAAC-AA-CATGT i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10950288 211 - 12073884 TGTAATTTGTCGCATTTACTTTCTGATTTTAACAATGTGTCTAAAGACTATCTGTATCTTTCTAACTTCCATAAAATGGCTACGTAAGGTAACTGGAA--------------------------GAAAAGT-----CCACTCTTGGGATGTTCGGTGTGTTG-TCTCACTTGTGTAAGGTCTAGAGCTGAG--TGTCTTAAA-------GCTCTACAAACTAACG-Gagtgaagaaattcagagtaaa-catta i otoGar3.GL873575 C 0 C 0 s dasNov3.JH569188 572891 237 + 760995 TTTAACTTGTTGCATTTAATGTCTACTTTTTGCAAAATGTCTATACCCTATTTATCTCTTTCAGATTTCTCTAAAGCCACTGTGAGA-AAAATGTAGATATGCTTTCTGAAACCTCTCAATGGTAAACAGG-----TTTCT----AAATATTCCCTCAGGATTTCTTCATGAGGTAGAGTTC----CTGAGCTTTGCTACTCAAAGTGTGCCCCAAGAACTGGGAaagtt--agaagttcagaat-aagcatcc i dasNov3.JH569188 C 0 C 0 e calJac3.chr4 169887044 1333 + 171630274 I e canFam3.chr1 56173082 6728 + 122678785 I a score=1609188.000000 s hg38.chr6_KB021644v2_alt 106784 157 + 185823 aggaa-ttttgccagaatttgacaatcggttgaatgtggtacatttaaaataggcttctattttgtagtattttaatttttgttacctttgatttttctcatattttatttttattgtattttacg--gaagtattg--c----tgtgtcggattCTATG------TTTACA s panTro5.chr6 173557877 157 + 175400573 aggaa-ttttgccagaatttgacattcggttgaatgtggtacatttaaaataggcttctattttgtagtattttaatttttgttacctttgatttttctcatattttatttttattgtattttacg--gaagtattg--c----tgtgttggattCTATG------TTTACA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171796943 157 + 173848474 aggaa-ttttgccagaatttgacaatcggttgaatgtggtacatttaaaataggcttctattttgtagtattttaatttttgttacctttgatttttctcatattttatttttattgtattttacg--gaagtattg--c----tgtgttggattCTATG------TTTACA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11479416 157 - 12463322 aggaa-ttttgccagaatttgacaatcggttgaatgtggtacatttaaaataggcttctattttgtagtattttaatttttgttacctttgatttttctcatattttatttttattgtattttatg--gaagtattg--c----tgtgtcggattCTATG------TTTACA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156305229 157 + 157873769 aggaa-ttttgccagaatttgacaatcggttgaatgtggtacgtttaaaatgggcttctattttgtagtattttaatttttgtcacctttgatttttctcgtattttaattttactgtattttacg--gaagtattg--c----tgtgtcggattCTATG------TTGACA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170333812 156 + 172585720 aggaa-ttttgccagaatttgacaatc-atcgaatgtggtacatttaaaatgggcttctattctgtagtattttaatttttgtgacctttgatttttctcacattttaattttattgtattttacg--gaagtattg--c----tgtgacggattCTATG------TTTGCA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169079509 156 - 170955103 aggaa-ttttgccagaatttgacaatc-atcgaatgtggtacatttaaaatgggcttctattctgtagtattttaatttttgtgacctttgatttttctcacattttaattttattgtattttacg--gaagtattg--c----tgtgacggattCTATG------TTTGCA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8365755 156 + 10161646 aggaa-ttttgccagaatttgacaatc-attgaatgtggtacatttaaaatgggcttctattctgtagtattttaatttttgtgacctttgatttttctcacattttaattttattgtattttacg--gaagtattg--c----tgtgacggattCTATG------TTTGCA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1396869 156 + 3144229 aggaa-ttttgccagaatttgacaatc-atcgaatgtggtacatttaaaatgggcttctattttgtagtattttaatttttgttacctttgatttttctcacattttaattttattgtattttacc--gaagtattg--c----tgtgacggattCTATG------TTTACA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96684292 156 + 98384682 aggaa-ttttgccagaatttgacaatc-gtcaaatgtggtacatttaaaatgggcttctattttgtagtattttaatttttgttacctttgatttttctcacattttaatgttattgtattttaca--gaagtattg--c----ggtgacagattCTATG------TTTACA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8220462 156 - 10857215 aggaa-ttttgccagaatttgacaatc-atcgaatgtggtacatttaaaatgggcttctattttgtagtattttaatttttgttacctttgatttttctcacattttaattttattgtattttact--gaagtattg--c----tgtgacggattCTATG------TTTACA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15613063 156 - 23502949 aggaa-ttttgccagaatttgacaatc-gtccaatatggtacatttaaaatgggcttctattttgtagtattttaacttttgttacctttgatttttctcacgttttaattttattgtattttacg--gaagtatgg--c----tgtgatggattCTACG------TTTACA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169888377 158 + 171630274 AGGAA-TTTTGCCAGAATTTGACAATC---AGAATTTGGTAAATTTAAAATGGGCttgtattttgtagtattttaatttttgttaccttttatttttctcatattttaattttattgtattttGGt--aaaatataa--taaaatttaaaatattatatG------TTTACA i calJac3.chr4 I 1333 C 0 s saiBol1.JH378287 1295334 154 - 2905041 AGGAA-TTTTGCCAGAATTTGATGATC---AGAATGGGGTGAATTTGAAATGGGCttctattttgtagtattttaaattgtgttatcttttatttttctcatattttaattttattgtattttaCC--AAAGTATTG--C----TGTGGCATATTATATG------TTTACA i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1259388 160 - 2164891 aggaa-ttttgccagaatttgacaact---ggaatggggtaaatttaaaatgggcttctattttgtagtattttaatttttgttaccttttatttttctcatattttaattttattgtattttacc--aaagtattg--c----tgtgacatattATATGTTTACATTTACA i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1508718 156 - 1813869 ACGAA-TTTTGCCAGAATTTGACAATT---GGAATGGGGTAAATTTAAAATGGGCTTCTATTTTGTAGTATTTTAATTTTTGTTACCTTTTATTTTTCTCATATTTTAATTTTATTGTATTTTACTGAAAAGTATTG--C----TGTGACATATTATATG------TTTACA i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10950499 156 - 12073884 ggagc-ttgtaccagaatttgacagtctattgaatgtgataaattacaaacaggcttatattttgtaatatctt---tattattatctttgattttccttacaattaattttaattgtttttcacc--agagtgttggtt----tgtgatggattgtaaa------tATGCA i otoGar3.GL873575 C 0 I 841 s dasNov3.JH569188 573128 160 + 760995 aggaatttttattgagatttgacaatcttttgaatagggcattaactatttgggcttatgttttgtaacatctttgtttttgctacctttcttttttctcataattcttctttattgtctttctcc--aaagtaatgacc----tgggatggaatgtaaa------ttgaaa i dasNov3.JH569188 C 0 C 0 e canFam3.chr1 56173082 6728 + 122678785 I a score=184061.000000 s hg38.chr6_KB021644v2_alt 106941 21 + 185823 TCGATAGAGTGTAAAGTTATA s panTro5.chr6 173558034 21 + 175400573 TCGATAGAGTGTAAATTTATA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171797100 21 + 173848474 TCGATAGAGTGTAAATTTATA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11479573 21 - 12463322 TCAATAGAGTGTAAATTTATA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156305386 21 + 157873769 TCGATAGAGTGTAAATTTATC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170333968 21 + 172585720 TCAATACAGTGTAAATTTATA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169079665 21 - 170955103 TCAATACAGTGTAAATTTATA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8365911 21 + 10161646 TCAGTACAGTGTAAATTTATA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1397025 21 + 3144229 TCAATACAGTGTAAATTTATA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96684448 21 + 98384682 TCAATACAGTGTAAATCTATA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8220618 21 - 10857215 TCAATACAGTGTAAATTTATA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15613219 21 - 23502949 TCAATACAGTGTAAATTTATA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169888535 21 + 171630274 TTGATATAGTGTCAATTTATA i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1295488 21 - 2905041 TTGATAGAGTGTAAACTTACA i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1259548 21 - 2164891 TTGATATAGTGGAAATTTATA i cebCap1.NW_016107695v1 C 0 I 6 s aotNan1.NW_018494782v1 1508874 21 - 1813869 TTGATATAGTGTAAATTTATA i aotNan1.NW_018494782v1 C 0 C 0 s dasNov3.JH569188 573288 17 + 760995 ---acaaaaaaaAAATTT-TA i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10950655 841 - 12073884 I e canFam3.chr1 56173082 6728 + 122678785 I a score=-12294.000000 s hg38.chr6_KB021644v2_alt 106962 2 + 185823 CA- s panTro5.chr6 173558055 2 + 175400573 CA- i panTro5.chr6 C 0 C 0 s panPan2.chr6 171797121 2 + 173848474 CA- i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11479594 2 - 12463322 CA- i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156305407 1 + 157873769 C-- i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170333989 1 + 172585720 C-- i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169079686 1 - 170955103 C-- i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8365932 1 + 10161646 C-- i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1397046 1 + 3144229 C-- i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96684469 1 + 98384682 C-- i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8220639 1 - 10857215 C-- i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15613240 1 - 23502949 C-- i colAng1.NW_012114488v1 C 0 C 0 s dasNov3.JH569188 573305 2 + 760995 C-A i dasNov3.JH569188 C 0 I 463 e otoGar3.GL873575 10950655 841 - 12073884 I e saiBol1.JH378287 1295509 0 - 2905041 C e aotNan1.NW_018494782v1 1508895 0 - 1813869 C e cebCap1.NW_016107695v1 1259569 6 - 2164891 I e calJac3.chr4 169888556 0 + 171630274 C e canFam3.chr1 56173082 6728 + 122678785 I a score=-3870.000000 s hg38.chr6_KB021644v2_alt 106964 14 + 185823 TCTTAATGTATGTT s panTro5.chr6 173558057 14 + 175400573 TGTTAGTGTATGTT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171797123 14 + 173848474 TGTTAGTGTATGTT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11479596 14 - 12463322 TGTTAGTGTATGTT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156305408 5 + 157873769 ---------ATGTT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170333990 5 + 172585720 ---------ATATT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169079687 5 - 170955103 ---------ATATT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8365933 5 + 10161646 ---------ATATT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1397047 5 + 3144229 ---------ATGTT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96684470 5 + 98384682 ---------ATGTT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8220640 5 - 10857215 ---------ATGTT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15613241 5 - 23502949 ---------ATGTT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169888556 6 + 171630274 ------TACACA-- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1295509 6 - 2905041 ------TACACA-- i saiBol1.JH378287 C 0 C 0 s aotNan1.NW_018494782v1 1508895 6 - 1813869 ------TACACA-- i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10950655 841 - 12073884 I e cebCap1.NW_016107695v1 1259569 6 - 2164891 I e dasNov3.JH569188 573307 463 + 760995 I e canFam3.chr1 56173082 6728 + 122678785 I a score=693937.000000 s hg38.chr6_KB021644v2_alt 106978 84 + 185823 AATGTATGTAGGCGCCTCTAGAGTTCCTCCGAGATGCAGCCGCAGAGACCTCATCAGTCCATGCCCTTAACTCCGTCCGCCTTC s panTro5.chr6 173558071 84 + 175400573 AATGTATGTAGGCGCCTCTAGAGTTCCTCTGAGATGCAGCCGCAGAGACCTCATCAGTCCATGCCCTTAACTCCGTCCGCCTTC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171797137 84 + 173848474 AATGTATGTAGGCGCCTCTAGAGTTCCTCTGAGATGCAGCCGCAGAGACCTCATCAGTCCATGCCCTTAACTCTGTCCGCCTTC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11479610 84 - 12463322 AATGTATGTAGGCGCCTCTAGAGTTCCTCCGAGATGCAGCCGCGGAGACCTCATCAGTCCATGCCCTTAACTCCGTCCGCCTTC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156305413 84 + 157873769 AATGTATGTAGGCGCCTCTACAGTTCCTCTGAGATGCAGCCGCGGAGACCTCATCCGTCCATGCCCTTAACTCCCTCCGCCTTC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170333995 84 + 172585720 AATGTAGGTACGCGCCTCTAGAGTTCCTCTGAGACGCAGCCGTGGAGACCTCATCAGTCCATGCCCTTAACTCCGGCTGCCTTT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169079692 84 - 170955103 AATGTAGGTACGCGCCTCTAGAGTTCCTCTGAGACGCAGCCGTGGAGACCTCATCAGTCCATGCCCTTAACTCCGGCTGCCTTT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8365938 84 + 10161646 AATGTAGGTACGCGCCTCTAGAGTTCCTCTGAGACGCAGCCGTGGAGACCTCATCAGTCCATGCCCTTAACTCCGGCTGCCTTT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1397052 84 + 3144229 AATGTAGGTAGGCGCCTCTAGAGTTTCTCTGAGATGCAGCCGTGGAGACCTCATCAGTCCATGCCCTTAACTCCGTCTGCCTTT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96684475 84 + 98384682 AATGTAGGCAGGCGCCTCTAGAGTTCCTCTGAGATGCAGCCGTGGGGACCTCATCAGTCCATGCCCTTAACTCCGTCTGCCTTT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8220645 84 - 10857215 AATGTAGGTAGGCGCCTCTAGAGTTCCTCTGAGATGCAGCCGTGGAGACCTCATCAGTCCATGCCCTTAACTCCGTCTGCCTTT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15613246 84 - 23502949 AATGTAGGTAGGCGCCTCTAGAGTTCCTCTGAGATGCAGCCGTGGAGACCTCATCAGTCCATGCCCTTAACTCCGTCTGCCTTT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169888562 83 + 171630274 AATGTATGTAGGCCCCTCTAGACATCCTCTGAGATGCAG-GGCTGAGAACTCGTCAGTCTCTGCTCCTAACTCAGTCCTCCTAT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1295515 81 - 2905041 AATGTACGTAGGCCCCT-TAGCGATCCTCTGAGATGT-G-GGCTGAGGACTCATCAGTCTCTGCCCCTAACTGAGTCCTCCTAT i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1259575 83 - 2164891 AATGTATGCAGGCCCCTCGAGAGACCCTCTGAGATGCAG-GGCTGAGAACTTATCCGTCTCTGCCGCTAACTCAGTCCTCCTAT i cebCap1.NW_016107695v1 I 6 C 0 s aotNan1.NW_018494782v1 1508901 82 - 1813869 AATGTATGTAAGCCCCTCTAGAGATCCTCTGAGATGCAG-GGCTGAGAACTCATCAGTCTCCGCCCC-AACTCAGTCCTCCTAT i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10950655 841 - 12073884 I e dasNov3.JH569188 573307 463 + 760995 I e canFam3.chr1 56173082 6728 + 122678785 I a score=1727362.000000 s hg38.chr6_KB021644v2_alt 107062 192 + 185823 TCTG-AACTCCTTGGGAAT-GCATCGGTCGTGAGATCAGCCTGGGCTCTGCTGAGAGAGGCC----CACAGTATCGGGCCTCTCAGTG----AATCTTCCACCACGATTCGATGGGACCCAGGGTTTTTCAACACCGCAACACAGAAGGCTACctggct-----ggaggggtga-------------------------------------gtgggcccttgggcaggtcttttaaactatgta s panTro5.chr6 173558155 192 + 175400573 TCTG-AACTCCTTGGGAAT-GCATCAGTCGTGAGATCAGCCTGGGCTCTGCTGAGAGAGGCC----CACAGTATCGGGCCTCTCAGTG----AATCTTCCACCACGATTCGATGGGACCCAGGGTTTTTCAGCACCGCAACACAGAAGGCTACctggct-----ggaggggtga-------------------------------------gtgggcccttgggcaggtcttttaaactatgta i panTro5.chr6 C 0 C 0 s panPan2.chr6 171797221 192 + 173848474 TCTG-AACTCCTTGGGAAT-GCATCAGTCGTGAGATCAGCCTGGGCTCTGCTGAGAGAGGCC----CACAGTATCGGGCCTCTCAGTG----AATCTTCCACCACGATTCGATGGGACCCAGGGTTTTTCAGCACCGCAACACAGAAGGCTACctggct-----ggaggggtga-------------------------------------gtgggcccttgggcaggtcttttaaactatgta i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11479694 192 - 12463322 TCTG-AACTCCTTGAGAAT-GCATCCGTCATGAGATCAGCCTGGGCTCTGCTGAGAGAGGCC----CACAGTATCGGGCCTCTCAGTG----AATCTTCCACCACGCTTCGATGGGACCCAGGGTTTTTCAACACCGCAACACAGAAGACTACctggct-----ggaggggtga-------------------------------------gtgggcccttgggcaggtcttttaaactatgta i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156305497 192 + 157873769 TCTG-AACTCCTTGGGAAT-GCATCGGTGGAGAGATCAGCCTGGGCTCTGCGGAGAGAGGCC----CACAGTATCAGGCCTCTCGGTG----AATCTTCCACCACGATTCGATGGGAGCCAGGGTTTTTCAACACCGCGACACAGAAGGCTACCTGGCT-----GGAGGGGTGA-------------------------------------gtgggcccttaggcaggtcttttaaactatgta i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170334079 192 + 172585720 TCTG-AACTGCTTGGGAAT-GCATCGGTCGTGAGATCAGCCTGGGCTCTGCTGAGAGAGGCC----CACAGTATCAGGCCTCTCAGTG----AGTCTTCCACCATGATTCGATGGGACCCAGGGTTTTTCAACACCGCAACGCAGCAGGCTACctggct-----ggaggggtga-------------------------------------gtggacccttgggcaggtcttttaaactgtgta i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169079776 192 - 170955103 TCTG-AACTGCTTGGGAAT-GCATCGGTCGTGAGATCAGCCTGGGCTCTGCTGAGAGAGGCC----CACAGTATCAGGCCTCTCAGTG----AGTCTTCCACCATGATTCGATGGGACCCAGGGTTTTTCAACACCGCAACACAGCAGGCTACctggct-----ggaggggtga-------------------------------------gtggacccttgggcaggtcttttaaactgtgta i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8366022 192 + 10161646 TCTG-AACTGCTTGGGAAT-GCATCGGTCGTGAGATCAGCCTGGGCTCTGCTGAGAGAGGCC----CACAGTATCAGGCCTCTCGGTG----AGTCTTCCACCATGATTCGATGGGACCCAGGGTTTTTCAACTCCGCAACACAGCAGGCTACctggct-----ggaggggtga-------------------------------------gtggacccttgggcaggtcttttaaactgtgta i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1397136 192 + 3144229 TCTG-AACTGCTTGGGAAT-GCATCGGTCGTGAGATCAGCCTGGGCTCTGCTGAGAGAGGCC----CACAGTGTCAGGCCTCTCGGTG----AGTCTTCCACCATGATTCGATGGGACCCAGGGTTTTTCAACACCGCAACACAGCAGGCTACctggct-----ggaggggtga-------------------------------------gtggacccttgggcaggtcttttaaactgtgta i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96684559 191 + 98384682 TCTG-AACTGCTTGGGAAT-GCATCGGTCGTGAGATCAGCCTGGGCTCTGCTGAGAGAGGCC----CACAGTATCAGGCCTCTCGGTG----AGTCTCCCACCATGATTCGAT-GGACCCAGGGTTTTTCAACATCGCAACACAGCAGGCTACctggct-----ggaggggtga-------------------------------------gtggacccttgggcaggtcttttaaactgtgta i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8220729 192 - 10857215 TCTG-AACTGCTTGGGAAT-GCATCGGTCGTGAGATCAGCCTGGGCTCTGCTGAGAGAGGCC----CACAGTGTCAGGCCTCTCGGTG----AGTCTTCCACCATGATTCGATGGGACCCAGGGTTTTTCAACACCGCAACGCAGCAGGCTACctggct-----ggaggggtga-------------------------------------gtggacccttgggcaggtcctttaaactgtgta i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15613330 197 - 23502949 TCTGCCACTGCTTGGGAAT-GCATCGGTCGTGAGATCAGCCTGGGCTCTGCTGAGAGAGGCCCACACACAGTATCAGGCTTCTCGGCG----AGTCTTCCACCATGATTCGATGGGACCCAGGGTTTTTCAACACCGCAACACAGCAGGCGACctggct-----ggaggggtga-------------------------------------gtgggcccttgggcaggtcttttaaactgtgta i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169888645 183 + 171630274 TCTG-AACTCCTTGAGAA---------TCGTGAAATCAGCCTGGGCTCTGCTGACTGAGGC-----CACAGCATCCTGCCTCTCAGTG----AATCGTCCCCCAGGATTCTGTGGGACCTGGGGTTTCTCAACAGCACAGAAAAGCAGGCTACCTGGTT-----GGAGGGCTGA-------------------------------------GCGGGCccctgggcaggtctggtaaacaatgta i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1295596 182 - 2905041 TCTG-AACTCCTTGAGAA---------TCGTGAGATCAGCCTGGGCTCTGTTGATTGAGGC-----CATAGCATCCTGCCTCTCGGTG----AATCGT-CCCCAGGATTCTGTGGGACCTGGAGTTTCTCAACAGTGCGGAAAAGCAGGCTACATGTTC-----GGAGGACTGA-------------------------------------gtgggcccctgggcaggtgtgttagacaatgta i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1259658 183 - 2164891 TCTG-AACTCCTTGCGAA---------TGGCCAGATCAGCCTGGGCGCTGTTGAGTGAGGC-----CACAGCATCCTGCCTCTCGGTG----AATCGTCCCCCACGATTCTGTGGGACCCGGGGTTTCCCAACAATGCAGAAAAGCAGGCTACCTGGTT-----GGAGGGCTGA-------------------------------------gtgggcccctgggcaggtgtgttaaacaatgta i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1508983 183 - 1813869 TCTG-AACTCCTTGAGAA---------TCGTGAGGTCAGCCTGGGCTCTGTTGATTGAGGC-----CACAGCATCCTGCCTCTCGGTG----AATCGTCCCCCAGGATTCTGTGGGACCTGGGGTTTTCCAACAGCGCAGAAAAGCAGGCTACCTGATT-----GGAGGGCTGA-------------------------------------gtgggcccctgggcaggtctgttaaacaatgta i aotNan1.NW_018494782v1 C 0 C 0 s dasNov3.JH569188 573770 238 + 760995 TTTG-TATTCTTTGGGAACAATGTTAGTAGT-AAATCAGCATAGCATCTGTTGAGAAAAGAGG---TGCAATACTTGTCCCCTTAGTGAATCAATCATTTACTGTAATTCTATGTAATCC-TTGTTTTTTATCATTGcaaagcaatatgttgcctggtcagtaaggaggagtgggcagaagactaggtttcagctcagcattttattaaatgtaggtccttggacatgtcatttaaacttttga i dasNov3.JH569188 I 463 C 0 e otoGar3.GL873575 10950655 841 - 12073884 I e canFam3.chr1 56173082 6728 + 122678785 I a score=1383803.000000 s hg38.chr6_KB021644v2_alt 107254 139 + 185823 gacctcagtttcctcatttgaaaaataaaggaatgggatttaaaatgtttccc--tctcagctctaaaacatctatgattcaagt-----aag-------attctgagcaaggtattatt-atCAGAGGGAAGTTGAGTTTCTTACCAACCTT--G s panTro5.chr6 173558347 139 + 175400573 gacctcagtttcctcatttgaaaaataaaggaatgggatttaaaatgtttccc--tctcagctctaaaacttctatgattcaagt-----aag-------attctgagcaaggtattatt-atCAGAGGGAAGTTGAGTTTCTTACCAACCTT--G i panTro5.chr6 C 0 C 0 s panPan2.chr6 171797413 139 + 173848474 gacctcagtttcctcatttgaaaaataaaggaatgggatttaaaatgtttccc--tctcagctctaaaacttctatgattcaagt-----aag-------attctgagcaaggtattatt-atCAGAGGGAAGTTGAGTTTCTTACCAACCTT--G i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11479886 139 - 12463322 gacctcagtttcctcatttgaaaaataaaggaatgggatttaaaatgtttccc--tctcagttctaaaacatctgtgattcaagt-----aag-------attctgagcaaggtattatt-atCAGAGGGAAGTTGAGTTTCTTACCAACCTT--G i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156305689 139 + 157873769 gaactcagtttcctcatttgaaaaataaaggaatgggatttaaaatgtttccc--tctcagctctgaaacgtctatgattcaagt-----aag-------attcTGAGCAAGGTATTATT-ATCAGAGGGAAGTTGAGTTTCTTACCAACCTT--G i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170334271 138 + 172585720 ggcctcagtttcctcatttgaaaaat-aaggaatgggatttaaaacgtttccc--tctcagctctaaaacatctatgattcaagt-----aag-------attccgagcaaggtattatt-atCAGAGGGAAGTTGGGTTTCTTACCAACCTT--G i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169079968 138 - 170955103 ggcctcagtttcctcgtttgaaaaat-aaggaatgggatttaaaacgtttccc--tctcagctctaaaacatctatgattcaagt-----aag-------attccgagcaaggtattatt-atCAGAGGGAAGTTGGGTTTCTTACCAACCTT--G i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8366214 138 + 10161646 ggcctcagtttcctcgtttgaaaaat-aaggaatgggatttaaaacgtttccc--tctcagctctaaaacatctatgattcaagt-----aag-------attccgagcaaggtattatt-atCAGAGGGAAGTTGGGTTTCTTACCAACCTT--G i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1397328 138 + 3144229 ggcctcagtttcctcatttgaaaaat-aaggaatgggatttaaaatgtttccc--tctcagctctaaaacatctatgattcaagt-----aag-------attccgagcaaggtattatt-atCAGAGGGAAGTTGGGTTTCTTACCAACCTT--G i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96684750 138 + 98384682 ggcctcagtttcctcgtttgaaaaat-aaggaatgggatttaaaatgtttccc--tctcagctctaaaacatctatgattcaagt-----aag-------attcCGAGCAAGGTATTATC-ATCAGAGGGACGTTGGGTTTCTTACCAACCTT--G i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8220921 135 - 10857215 ggcctcagtttcctcgtttgaaaaat-aaggaatgggatttaaaatgtttccc--tctcagctctaaaacatctatgattcaagt-----aag-------attcTGAGCAAGGTATT----ATCAGAGGGAAGTTGGGTTTCTTACCAACCTT--G i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15613527 138 - 23502949 ggcctcagtttcctcgtttgaaaaat-aaggaatgggatttaaaatgtttccc--tctcagctgtaaaacatctatgactcaagt-----acg-------attcCGAGCAAGGTATTACT-CTCAGAGGGAAGTTGGGTTTCTTACCAACCTT--G i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169888828 143 + 171630274 ggcctcagtttcctcatttgaaaaataaaggaatggaatttaaaatgtttccc--tcttagctttaaaacttct-agattcaagtcagacaag-------attgtgaGTGAGGCATTATTGATCAGAGGAAAGCTGAGTTTCTCGGCAACTGT--- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1295778 143 - 2905041 ggcctcagtttcctcatttgaaaaataaaggaatggaatttaaaatgtttccc--tctcagctctaaaacttcc-agattcaagtaagacaag-------attgtgaGTGAGGCATTATTGATCAGAGGGAAGCTGAGTTTCTCAGCAGCTTT--- i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1259841 144 - 2164891 ggcctcagttttctcatttgaaaaataaaggaatggaatttaaaatgtttccc--tctcagctctaaaacttct-tgattcAAGTAAGACAAG-------ATTGTGAGTGAGGCATTATTGATAAGAGGGAAGCTGAGTTTCTCAGCAACTTTG-- i cebCap1.NW_016107695v1 C 0 I 52 s aotNan1.NW_018494782v1 1509166 137 - 1813869 ggcctcagtttcctcatttgaaaaataaaggaatggagttcaaaatgtttccc--tctcagctctaaaact----GGATTCA----GGACAAG-------ATTGTGAGTGAGGCGTCATTGATCGGAGGGAAGTTGAGTTTCTTAGCAACTTT-G- i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10951496 138 - 12073884 ggtctcagtttgcccatttgacaaatgagaggattggatttaaaatgctgccg--tctcagctctggaactttt-tgattcAAAT-----AAGGAAGGC-ATCCTGAGAGAGATGTT--T-CTTAGAAGCAGGTTG-GTTGCTCATCACCT----- i otoGar3.GL873575 I 841 C 0 s dasNov3.JH569188 574008 148 + 760995 ggcttcagtttccccatttgaaaaat-gaggagatgagcttaaattttttccccacttcagctctaaaacttgtatgtttcAAGT-----AAATAAGGTAATTCTGAGTGAGATACTGTTTGTTAGAGGAAAATTGCATTTCTTATGAACACT--G i dasNov3.JH569188 C 0 C 0 e canFam3.chr1 56173082 6728 + 122678785 I a score=300199.000000 s hg38.chr6_KB021644v2_alt 107393 52 + 185823 TGCTGAGCGGGAAGGA----CCTCCGTGTCCAGCGCCCCGTAGGTCCGACGCCTG-T s panTro5.chr6 173558486 52 + 175400573 TGCTGAGCGGGAAGGA----CCTCCGTGTCCAGCGCCCCATAGGTCCGACGCCTG-T i panTro5.chr6 C 0 C 0 s panPan2.chr6 171797552 52 + 173848474 TGCTGAGCGGGAAGGA----CCTCCGTGTCCAGCACCCCATAGGTCCGACGCCTG-T i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11480025 52 - 12463322 AGCTGAGCGGGAAGGA----CCTCCGTGTCCAGCGCCCCGTAGGTCCGACGCCTA-T i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156305828 52 + 157873769 TGCTGAGCGGGAAGGA----CCTCCGTGTCCAGCGCCCCGCAGGTCTGACGCCTG-T i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170334409 57 + 172585720 TGCTGAGCGGGAAGGACAGGCCTCCATGTCCAGCACCCCGTAGATCCAACGCCTGCC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169080106 57 - 170955103 TGCTGAGCGGGAAGGACAGGCCTCCATGTCCAGCACCCCGTAGATCCAACGCCTGCC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8366352 57 + 10161646 TGCTGAGCGGGAAGGACAGGCCTCCATGTCCAGCACCCCGTAGATCCAACGCCTGCC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1397466 56 + 3144229 TGCTGAGCGGGAAGGACAGGCCTCCATGTCCAGCACCCCGTAGATCCAATGCCTG-C i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96684888 56 + 98384682 TGCTGAGCGGGAAGGACAGGCCTCTGTGTCCAGCGCCCCGTAGATCCAACGCCTG-C i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8221056 56 - 10857215 TGCTGAGCGGGAAGGACAGGCCTCCATGTCCAGCGCCCCGTAGATCCAATGCCTG-C i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15613665 56 - 23502949 TGCTGAGCGGGAAGGACAGGCCTCCGCGTCCAGCGCCCCGTAGATCCAACGCCTG-A i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169888971 44 + 171630274 ------GCAGACAGG------CCCTGTTTCCAGGGTCCTGTAAACCTGACCCCCG-T i calJac3.chr4 C 0 I 9 s saiBol1.JH378287 1295921 44 - 2905041 ------GCAGACAGG------CCCTGTGTTCAGGGCCCTGCAAACTGGATCCCCG-T i saiBol1.JH378287 C 0 I 9 s aotNan1.NW_018494782v1 1509303 43 - 1813869 -------CAGGCAGG------CCCTGTGTCCAGGGCCCTGTAAACCTGACCCCTG-T i aotNan1.NW_018494782v1 C 0 I 9 s otoGar3.GL873575 10951634 35 - 12073884 ------------GGGacctg-ctgtgttcccggcacacctt--------cccctc-t i otoGar3.GL873575 C 0 C 0 s dasNov3.JH569188 574156 56 + 760995 AACCGAGAGTAAAGAACAGGTTTCTACTTCTAATGCATGGAAAATATGATGTATA-A i dasNov3.JH569188 C 0 C 0 e cebCap1.NW_016107695v1 1259985 52 - 2164891 I e canFam3.chr1 56173082 6728 + 122678785 I a score=4421636.000000 s hg38.chr6_KB021644v2_alt 107445 423 + 185823 GCGTGGCTGATCGCTTCACG--CCCCCATCCTTT---GGT--T--CTTGTAGCAAATAAAGGGGCTTGAACTAGAAATCTGCTGCAATTACTTCTGAGTCTTGGGAGGTTTTGAAATTTTTAATGAGAAAAATGTGAGC-AGAAGAGAAATGAAATCCCTCTCCCTGTGAGCTT-GGCGTCCCCT------------GCCTCGCTGCTGGCCAGCGCTGCCCTGGTGAC-AGAACCCCGAGCTGGC-GGCCGGCCGCTGGCAT-CAGG--TTGCAG--TGAGTCGCAGCCT--ACGTGAATG----GGTTTGACATGAAAGGGCCTCGGGTATGGGGCATTGCCAACTCCTGATTGTGCCCACGGGGAGGACCCCATAGTCGTCGCCAAGAAGTGGTGGTCGCCACTCTTCCCAGGGGCGAGGAAAAATGAATGGCCCAGTGCAGGCCCACACGCAGGG s panTro5.chr6 173558538 427 + 175400573 GCGTGGCTGATCGCTTCATG--CCCCCATCCTTT---GGT--T--CTTGTAGCAAATAAAGGGGCTTGAACTAGAAATCTGCTGCAATTACTTCTGAGTCTTGGGAGGTTTTGAAATTTTTAATGAGAAAAATGTGAGC-AGAAGAGAAATGAAATCCCTCTCCCTGTGAGCTT-GGCGTCCCCT------------GCCTCGCTGCTGGCCAGCGCTGCCCTGGTGAC-AGAACCCCGAGCTGGC-GGCCGGCCGCTGGCAT-CAGG--TTGCAG--TGAGTCGCAGCCT--ACGTGAATGTTTGGGTTTGACATGAAAGGGCCTCGGGTATGGGGCATTGCCAACTCCTGATTGTGCCCACTGGGAGGACCCCATAGTCGTCGCCAAGAAGTGGTGGTCGCCACTCTTCCCAGGGGCGAGGAAAAATGAATGGCCCAGTGCAGGCCCACACGCAGGG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171797604 427 + 173848474 GCGTGGCTGATCGCTTCATG--CCCCCATCCTTT---GGT--T--CTTGTAGCAAATAAAGGGGCTTGAACTAGAAATCTGCTGCAATTACTTCTGAGTCTTGGGAGGTTTTGAAATTTTTAATGAGAAAAATGTGAGC-AGAAGAGAAATGAAATCCCTCTCCCTGTGAGCTT-GGCGTCCCCT------------GCCTCGCTGCTGGCCAGCGCTGCCCTGGTGAC-AGAACCCCGAGCTGGC-GGCCGGCCGCTGGCAT-CAGG--TTGCAG--TGAGTCGCAGCCT--ACGTGAATGTTTGGGTTTGACATGAAAGGGCCTCGGGTATGGGGCATTGCCAACTCCTGATTGTGCCCACTGGGAGGACCCCATAGTCGTCGCCAAGAAGTGGTGGTCGCCACTCTTCCCAGGGGCGAGGAAAAATGAATGGCCCAGTGCAGGCCCACACGCAGGG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11480077 426 - 12463322 GCGTGGCTGATCGCTTCATG--CCCCCGTCCTTT---GGT--T--CTTGTAGCAAATAAAGGGGCTTGAACTAGAAATCTGCTGCAATTACTTCTGAGTCTTGGGAGGTTTTGAAATTTTTAATGAGAAAAATGTGAGC-AGAAGAGAAATGAAATCCCTCTCCCTGTGAGCTT-GGCGTCCCCT------------GCCTCGCTGCTGGCCAGCGCTGCCCTGGTGAC-AGAATCCCGAGCCGGC-CGCTGGCCGCTGGCGT-CAGG--TTGCAG--CGAGTCGCAGCCT--ACGTGAATGTTTGGGTTTGACATGAAAGGACCTTGGGTATGGGGCATTGCCAACTCCTGATTGTGCCCACTGGGA-GACCCCATAGTCGTCGCCAAGAAGTGGTGGTCGCCACTCTTCCCAGGGGCGAGGAAAAATGAATGGCCCAGTGCAGGCCCACACGCAGGG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156305880 427 + 157873769 GCGTGGCTGATGGCTTCGTG--TCCCCGTCCTTT---GGT--C--CTTGTAGCAAATAAAGGGGCTTGAACTAGAAATCTGCTGCCATTACTTCTGAGTCTTGGGAGGTTTTGAAATTTTTAATGAGAAAAATGTGAGC-AGAAGAGAAATGAAATCCCTCTCCCTGTGAGCTC-GGCGTCCCCT------------GCCTCGCTGCTGGCCAGCGCTGCCCTGGTGAC-AGAACCCCGAGCTGGC-GGCCGGCCACTGGCGT-CAGG--TTGCAG--TGAGTCGCAGCCT--ACGTGAATGTTTGGGTTTGACATGAAAGGGCCTCGGGTCTGGGGCATTGCCAACTCCTGATTGTGCCCACTGGGAGGGCCCCATAGTCGTCGCCAAGAGGCAGTGGTCGCCACTCTTCCCAGGGGCGAGGAAAAATGAATGGCCCAGTGCAGGCCCACACGCGGGG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170334466 423 + 172585720 GCGTGGCTGTTCGCTTCATG--CCCCTGTCCTTTG--GGT--T--CTTCTAGCAAATAAAGGGGCTTGAACTAGAAATCTGCTGCAATTACTTCTGAGTCTTGGGAGGTTTTGAAATTTTTAATGAGAAAAACGTGAGC-AGAAGAGAAATGAAAGCTGTCTCCCTGTGAATGC-GGCGTCCCCT------------GCCTCGCTGCTGGCCAGCGCTGCCCTGGTGAC-AGAACCCA-AGCCAGC-----GGCCGCTGGCGT-CAGG--TTGCAG--CGAGTCGCAGTCT--ACGTGAATGTTTGCGTCTGACATGAAAGGGCCTTGGGTATGGGGCATTGCCAACTCCTGATTGTGCCTATTGAGAGGGCCCCATGGTCGTCGCCAACAAGTGGTGGTCGCCACTCTTCCCAGGGGCGAGGAAAAATGAATGGCCCGGTGCAGGCCCACACGCAGGG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169080163 423 - 170955103 GCGTGGCTGTTCGCTTCATG--CCCCTGTCCTTTG--GGT--T--CTTCTAGCAAATAAAGGGGCTTGAACTAGAAATCTGCTACAATTACTTCTGAGTCTTGGGAGGTTTTGAAATTTTTAATGAGAAAAACGTGAGC-AGAAGAGAAATGAAAGCCCTCTCCCTGTGAACGC-GGCGTCCCCT------------GCCTCGCTGCTGGCCAGCGCTGCCCTGGTGAC-AGAACCCA-AGCCGGC-----GGCCGCTGGCGT-CAGG--TTGCAG--CGAGTCGCAGTCT--ACGTGAATGTTTGCGTCTGACATGAAAGGGCCTTGGGTATGGGGCATTGCCAACTCCTGATTGTGCCTATTGAGAGGGCCCCATGGTCGTCGCCAACAAGTGGTGGTCGCCACTCTTCCCAGGGGCGAGGAAAAATGAATGGCCCGGTGCAGGCCCACACGCAGGG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8366409 423 + 10161646 GCGTGGCTGTTCGCTTCATG--CCCCTGTCCTTTG--GGT--T--CTTCTAGCAAATAAAGGGGCTTGAACTAGAAATCTGCTGCAATTACTTCTGAGTCTTGGGAGGTTTTGAAATTTTTAATGAGAAAAACGTGAGC-AGAAGAGAAATGAAAGCTGTCTCCCTGTGAACGC-GGCGTCCCCT------------GCCTCGCTGCTGGCCAGCGCTGCCCTGGTGAC-AGAACCCA-AGCCGGC-----GGCCGCTGGCGT-CAGG--TTGCAG--CGAGTCGCAGTCT--ACGTGAATGTTTGCGTCTGACATGAAAGGGCCTTGGGTATGGGGCATTGCCAACTCCTGATTGTGCCTGTTGAGAGGGCCCCATGGTCGTCGCCAACAAGTGGTGGTCGCCACTCTTCCCAGGGGCGAGGAAAAATGAATGGCCCGGTGCAGGCCCACACGCAGGG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1397522 423 + 3144229 GCGTGGCTGTTCGCTTCATG--CCCCCGTCCTTTG--GGT--T--CTTCTAGCAAATAAAGAGGCTTGAACTAGAAATCTGCTACAATTACTTCTGAGTCTTGGGAGGTTTTGAAATTTTTAATGAGAAAAATGTGAGC-AGAAGAGAAATGAAAGCCTTCTCCCTGTGAACGC-GGCGTCCCCT------------GCCTCGCTGCTGGCCAGCGCTGCCCTGGTGAC-AGAACCCC-AGCCGGC-----GGCCACTGGCGT-CAGG--TTGCAG--CGAGTCGCAGTCT--ACGTGAATGTTTGCGTCTGACATGAAAAGGCCTTGGGTATGGGGCATTGCCAACTCCTGATTGTGCCTATTGAGAGGGCCCCATGTTCGTCGCCAACAAGTGGTGGTCGCCACTCTTCCCAGGGGCGAGGAAAAATGAATGGCCGGGTGCAGGCCCACACGCAGGG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96684944 423 + 98384682 GCGTGGCTGTTCGCTTCATG--CCCCCGTCCTTTG--GGT--T--CTTCTAGGAAATAAAGGGGCTTGAACTAGAAATCTGCTACAATTACTTCTGAGTCTTGGGAGGTTTTGAAATTTTTAATGAGAAAAATGTGAGC-TGAAGAGAAATGAAAGCCCTTTCCCTGTGAACGC-GGCGTCCCCT------------GCCTCGCTGCTGGCCAGCGCTGCCCTGGTGAC-AGAACCTC-AGCCGGC-----GGCCGCTGGCGT-CAGG--TTGCAG--CGAGTCGCAGTCT--ACGTGAATGTTTGCATCTGACATGAAAGGGCCTTGGGTATGGGGTATTGCCAACTCCTGATTGTGCCTATTGAGAGGGCCTCATGGTCGTCGCCAACAAGTGGTGGTCGCCACTCTTCCCAGGGGCGAGGAAAAATGAATGGCCCGGTGCAGGCCCACACGCAGGG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8221112 423 - 10857215 GCGTGGCTGTTCGCTTCATG--CCCCCGTCCTTTG--GGT--T--CTTCTAGCAAATAAAGGGGCTTGAACTAGAAATCTGCTACAATTACTTCTGAGTCTTGGGAGGTTTTGAAATTTTTAATGAGAAAAATGTGAGC-AGAAGAGAAATGAAAGCTCTCTCCCTGTGAACGC-AGCGTCCCCT------------GCCTCGCTGCTGGCCAGCGCTGCCCTGGTGAC-AGAACCCC-AGCCGGC-----GGCCGCTGGCGT-CAGG--TTGCAG--CGAGTCGCAGTCT--ACGTGAATGTTTGCGTCTGACATGAAAGGGCCTTGGGTATGGGGCATTGCCAACTCCTGATTGTGCCTATTGAGAGGGCCCCATGGTCGTCGCCAACAAGTGGTGGTCGCCACTCTTCCCAGGGGCGAGGAAAAATGAATGGCCGGGTGCAGGCCCACACGCAGGG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15613721 422 - 23502949 GCGTGGCTGTTCGCTTCATG--CCCC-GTCCTTTG--GGT--T--CTTCTAGCAAATAAAGGGGCTTGAACTAGAAATCTGCTACAATTACTTCTGAGTCTTGGGAGGTTTTGAAATTTTTAATGAGAAAAATGTGAGC-AGAAGAGAAATGAAAGCCCTCTCCCTGTGAACGC-GGTGTCCCCT------------GCCTCGCTGCTGGCCAGCACTGCCATGGTGAC-AGAACCCC-AGCCGGA-----GGCCGCTGGCGT-CAGG--TTGCAG--CGAGTCGCAGCCT--ACGTGAATGTTTGCGTCTGACATGAAAGGGCCTTGGGTATGGGGCACTGCCAACTCCTGATTGTGCCTATTGAGAGGGCCCCATGGTCGTCGCCAACAAGTGGTGGTCGCCACTCTTCCCAGAGGCGAGGAAAAACGAATGGCCCGGTGCAAGCCCACACGCAGGG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169889024 426 + 171630274 GCCTGCACAATCACTTCATG-CCTTCCATCCTTTG--GGT--T--TTTCTAGAAAATGAACGGGCTTG-ACTAGAAATCAGCTAC-ATTACTTCTGAGTCTTGGGACGTTTTGAAGTTTTTAATGAAAACAACGTGCGTGAGCAGAGAAATGAAATCCC-CTCCCCATGAGTAT-GGCATCCCCT------------GCCTCGCTGCTGGCCAGGGCTGCCCTGGTGAC-AGAACCCTGAGCTGGC-GGT-GGCTGCTGGCGT-CGGG--TTGCGG--CCAGTCGCAGCCC--ACGTGGGTGCTTGGGTTTTACATGAAAGGGCCTTGGGTATGGGGCACTGCCAACTCCTGATTGTGCCCATTGGGAGGGTCCCACCGTCGCCGCCAAGATGTGGTGGTTGCCACTCTTCCCAGAGGCGAGGAAAAATGAATGGCCTGGTGCAGGCCCACACGCAGGG i calJac3.chr4 I 9 C 0 s saiBol1.JH378287 1295974 425 - 2905041 GCCTGGACAATCGCCTCATGCCCCCCCATCCTTTG--GGT--T--TTTCTAGCAAATGAA-GGGGTCG-ACTAGAAATCAGCTACAATTACTTCTGGGTCTTGGGAGGTTTTTAAGTTTTTAATGAAAACAACGTGAGC-AGAAGAGAAATGAAATCCC-CTCCCCATGAGCAC-AGCGTCCCC-------------GCCTCGCTGCTGGCCAGGGCTGCCCTGGTGAC-AGAGCCCTGAGCTGGC-GGC-AGCTGCTGGCAT-CAGG--TTGCGG--CCAGTCGCAGCCC--ACGTGGGTGCTTGGGTTTGACATGAAAGGGCCTTGGGTATGGGGCGCTGCCAACTCCTGATTGTGCCCATCGGGAGGGCCCCACCGTCGCCACCAAGACGTGGTGGTTGCCACTCTTCCCAGAGGCGAGGAAAAACGGATGGCCCGGTGCAGGCCCACACGCAGGG i saiBol1.JH378287 I 9 C 0 s cebCap1.NW_016107695v1 1260037 426 - 2164891 GCCTGGATGATCACTTCATG-CCCCCCATCCTTTG--GGT--T--TTTCTAGCAAATGAAGGGGCTTG-ACTAGAAATCAGCTACAATTACTTCTGAGTCTTGGGAGGTTTTGAAGTTTTTAATGAAAACAACGTGAGC-AGAAGAGAAATGAAATCCC-CTCCCCATGAGCAC-GGCGTCCCCT------------GCCTCGATGCTGGCCAGGGCTGCCCTGGTGAC-AGAGCCCTGAGCTGGC-GGC-GGCTGCTGGCGT-CAGG--TTGCGG--CCAGTCATAGCCC--ACGTGGGTGCTTGGGTTTGACATGAAAGGGCCTTGGGTATGGGGCACTGCCAACTCCTGATTGTGCCCATCAGGAGGGCCCCACCGTCGCCACCAAGACGTGGTGGTTGCTACTCTTCCCAGAGGCGAGGAAAAATGGATGGCCTGGTGCAGGCCCACACGCAGGG i cebCap1.NW_016107695v1 I 52 I 122 s aotNan1.NW_018494782v1 1509355 425 - 1813869 ccctggacgatcgcttcatg--cccccatccttta--ggt--t--tttgtagcaaatgaaggggcttg-actagaaatcagctacaattacttctgagtctTGGGAGGTTTTGAAGTTTTTAATGAAAACAACGTGAGC-AGAAGAGAAATGAAATCCC-CTCCCCATGAGCAT-GGCGTCCCCT------------GCCTCGCTGCTGGCCAGGGCTGCCCTGGTGAC-AGAGCCCTGAGCTGGT-GGC-GGCTGCTGGCGT-CAGG--TTGCGG--CCAGTCGCAGCCC--ACGTGGGTGCTTGGGTTTGACATAAAAGGGCCTTGGGTATGGGGCACTGCCAACTCCTGATTGTGCCCATCGGGAGGGCCCCACCATCGCCGCCAAGACGTGGTGGTTGCCACTCTTCCCAGAGGCGAGGAAAAATGAATGGCCCAGTGTAGGCCCACACACAGGG i aotNan1.NW_018494782v1 I 9 C 0 s otoGar3.GL873575 10951669 385 - 12073884 ----------------------ccctggtgctctgttggt--cagcttctctcaaaggaaggagcctagaccagaaatctgttagtgtttcttctgagtcttgacattctttg------------------------GC-AGGAGAGAAATCAACCACCCTTCCCTGTGGGTTCAGGCATGCCCT------------GCC----CGCAGGCCAGCACTGCGA-GGTGAC-AGGAGCCCCAGCTGTG-GCT-GGCCACTCACATCCACA--TCACAATTCCAGTCGCAGCCTCAGCACGAATGTCTGGGTTTGGCAGGAAAGAGCCTGGGCGATGGTGTGTTTCCAGCTGCTGACTGTGCTCCTCCGTA-GGCCCCGCAGCCTCTGCCAAGCAGCGGTGGTCGCCACTCTTCCCAGAGGGAAGGAAAACAGAATTGCTCGCTGC-GGCCCAC-CGCAGGG i otoGar3.GL873575 C 0 C 0 s dasNov3.JH569188 574212 447 + 760995 ATATAGCAAATTACTTTATG--CTCTATTGGTTTA--CTTCAT--CTTCGAACAAATGAAGGGACTTGGGTTAGATGCAGGTTAGAATTTCTTCTGAGTTTTGAGAGTCTTTGTAATTTTGAATG--GAAAATATGGGC-AGAAAGAAATTGCATACCCTTCCTTGAGGGTTTC-AGCGTCCTCTCTGGAGGGGCCAGCATTGCCTCTGTCTGTCATAGCATTGGTGACAAGAACAATGAGCTAGTTGGTTGACCTCTGGGGG-CAAGATTTGCAATTCGAATCCCAGTCTTAACATCAATGTTTGGATTTGATATAAAAGAGACTTAGTTATAGTATATTACCAGCTCTTGATTGTGCCAGTCAGGAGGGCCACATATTTAGTGCCAAGAAATGGTGGTTGCCTCTCTTCCCAGAGGGGAGGAAAA-TGAACTGCCTGCTGTAGGCCCACACGCATGG i dasNov3.JH569188 C 0 C 0 e canFam3.chr1 56173082 6728 + 122678785 I a score=84977.000000 s hg38.chr6_KB021644v2_alt 107868 13 + 185823 ATGGCACAGCCGG s panTro5.chr6 173558965 13 + 175400573 ATGGCACAGCCGG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171798031 13 + 173848474 ATGGCACAGCCGG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11480503 13 - 12463322 ATGGCACAGCCGG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156306307 13 + 157873769 ATGGCACAGCCGG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170334889 13 + 172585720 ATGGCACAGCCGG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169080586 13 - 170955103 ATGGCACAGCCGG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8366832 13 + 10161646 ATGGCACAGCCGG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1397945 13 + 3144229 ATGGCACAGCCGG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96685367 13 + 98384682 ATGGCACAGCCGG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8221535 13 - 10857215 ATGGCACAGCCGG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15614143 13 - 23502949 ATGGCACAGCCGG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169889450 12 + 171630274 GTCCCACCACTG- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1296399 10 - 2905041 GTCCCACCGC--- i saiBol1.JH378287 C 0 C 0 s aotNan1.NW_018494782v1 1509780 12 - 1813869 ATCCCACCGCTG- i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10952054 13 - 12073884 ATCACACACCCGG i otoGar3.GL873575 C 0 C 0 s dasNov3.JH569188 574659 13 + 760995 ATTATGCAATCAA i dasNov3.JH569188 C 0 C 0 e cebCap1.NW_016107695v1 1260463 122 - 2164891 I e canFam3.chr1 56173082 6728 + 122678785 I a score=3767231.000000 s hg38.chr6_KB021644v2_alt 107881 403 + 185823 CTTGTGAGGG-GCAGAGGCTG-----GAGCAATGGGG-AGGG------------GCTGTTTCGAGGAATGGAGATAATGAGCGTCTTCGGAAACCCTTCTGTTTAA-TTCACTCTTGATTGATTGTTAAGAAAAAGAGAAAAGATTCCATTGCCTACAGCGAAGAGTCAATCTCACGGATACATCGGAG-------CCCCCGGTTAATCCGCTTCATCTTTCATCT----GTGCT--GCAGTCGTGGA-TTTTAATGAGTTGCAGGCGACCCATTCAGACGTAATGGTGTGGAGGTCAACGTGGGTCAAGTTTAAGAAGGG---GGGG-CTCAGGGGTAGAAGGAAGAAACGGGGACGCTTGTCATGATCA---CAGCCGGGAGGAGAAATG---GATCCGCTGGGCTTGg---agaaagagg-----gaaggagagacagagagtg----------------------------ggagacag s panTro5.chr6 173558978 403 + 175400573 CTTGTGAGGG-GCAGAGGCTG-----GAGCAATGGGG-AGGG------------GCTCTTTCGAGGAATGGAGATAATGAGCGTCTTCGGAAACCCTTCTGTTTAA-TTCACTCTTGATTGATTGTTAAGAAAAAAAGAAAAGATTCCATTGCCTACAGCGAAGAGTCAATCTCACGGATACATCGGAG-------CCCCCAGTTAATCCGCTTCATCTTTCATCT----GTGCT--GCAGTCGTGGA-TTTTAATGAGTTGCAGGCGACCCATTCAGATGTAATGGTGTGGAGGTCAACGTGGGTCAAGTTTAAAAAGGG---GGGG-CTCAGGGGTAGAAGGAAGAAACGGGGACACTTGTCATGATCA---CAGCCGGGAGGAGAAATG---GATCCGCTGGGCTTGg---agaaagagg-----gaaggagagacagagagtg----------------------------ggagacag i panTro5.chr6 C 0 C 0 s panPan2.chr6 171798044 403 + 173848474 CTTGTGAGGG-GCAGAGGCTG-----GAGCAATGGGG-AGGG------------GCTCTTTCGAGGAATGGAGATAATGAGCGTCTTCGGAAACCCTTCTGTTTAA-TTCACTCTTGATTGATTGTTAAGAAAAAAAGAAAAGATTCCATTGCCTACAGCGAAGAGTCAATCTCACGGATACATCGGAG-------CCCCCGGTTAATCCGCTTCATCTTTCATCT----GTGCT--GCAGTCGTGGA-TTTTAATGAGTTGCAGGCGACCCATTCAGATGTAATGGTGTGGAGGTCAACGTGGGTCAAGTTTAAAAAGGG---GGGG-CTCAGGGGTAGAAGGAAGAAACGGGGACACTTGTCATGATCA---CAGCCGGGAGGAGAAATG---GATCCGCTGGGCTTGg---agaaagagg-----gaaggagagacagagagtg----------------------------ggagacag i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11480516 397 - 12463322 CTTGTGAGGG-GCAGAGGCTG-----GAGCAATGGGG-AGGG------------GCTGTTTCGAGGAATGGAGATAATGAGTGTCTTCGGAAACCCTTCTGTTTAA-TTCACTCTTGATTG-----TCAGAAAAAAAGAAAAGATTCCATTGCCTACAGCGAAGAGTCAATCTCACGGATACATCGGAG-------CCCCCGGTTAATCCGCTTCATCTTTCATCT----GTGCT--GCAGTCGTGGA-TTTTAACGAGTTGCAGGCGACCCGTTCAGATGTAATGGTGTGGAGGTCAACGTGGGTCAAGTTTAAAAA-GG---GGGG-CTCAGGGAGAGAAGGAAGAAACGGGGACACTTGTCATGATCA---CAGCCGGGAGGAGAAATG---GATCCGCTGGGCTTGg---agaaagagg-----gaaggagagacagagagtg----------------------------ggagacag i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156306320 404 + 157873769 CTTGTGAGGG-GCAGAGGCTG-----GAGCAATGGGG-AGGG------------GCTGTTTCAAGGAATGGAGGTAATAAGCGTCTTCGGAAACCCTTCTGTTTAA-TTCACTCTTGATTGATTGTTAAGAAAAAAAGAAAAGATTCCATTGCCTACAGCGAAGAGTCAATCTCACGGATCCATCGGAG-------CCCCCGGTTCATCGGCTTCATCTTTCGTCT----GTGCT--GCGCTCGCGGA-TTTTAATGAGTTGCAGGCGACCCATTCAGATGTAATGGTGTGGAGGTCAACGTGGGTCAAGTTTAAAAAGGG---GGGGTCTCAGGGAGAGAAGGAAGAAACGGGGACACTTGTCATGATCA---CAGCCGGGAGGAGAAATG---GATCCGCTGGGCTTGg---agaaagagg-----gaaggagagacagagagag----------------------------ggagacag i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170334902 394 + 172585720 CTTGTGAGGG-GCAGAGGCTG-----GAGCAATGGGG-AGGG------------GGTGTTTCGAGGAATGGAGATAATGAGTGACTTCGGAAACACTTCTGTTTAA-TTCACTCTCGATTGATTGTTAAGAAAAAAAGAAAAGATTCCGTTGCCTACAGCAAAGAGTCAATCTTA---------CGGAG-------CCCCGGGTTCACCCGCTTCATCTTTCATCT----GTGCT--GCGCTCACGGA-TTTTAATCAGTTGCAGGAGACCCTTTCAGATGTAATGGTGTAGAGGTCAACGTGGGTCACGTTTTAAAAGGG---GGCG-CTCAGGGAGGGAAGGAAGAAACAGGGACACTTGTCATGATCA---CAGCCGGGAGGAGAAATG---GATCTGCTTGGCTTGg---agaaagagg-----gaaggagagacagagagag----------------------------ggacacag i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169080599 394 - 170955103 CTTGTGAGGG-GCAGAGGCTG-----GAGCAATGGGG-AGGG------------GGTGTTTCGAGGAATGGAGATAATGAGTGACTTCGGAAACACTTCTGTTTAA-TTCACTCTCGATTGATTGTTAAGAAAAAAAGAAAAGATTCCGTTGCCTACAGCAAAGAGTCAATCTTA---------CGGAG-------CCCCGGGTTCACCCGCTTCATCTTTCATCT----GTGCT--GCGCTCACGGA-TTTTAATCAGTTGCAGGAGACCCTTTCAGATGTAATGGTGTAGAGGTCAACGTGGGTCACGTTTTAAAAGGG---GGCG-CTCAGGGAGGGAAGGAAGAAACGGGGACACTTGTCATGATCA---CAGCCGGGAGGAGAAATG---GATCTGCTTGGCTTGg---agaaagagg-----gaaggagagacagagagag----------------------------ggacacag i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8366845 394 + 10161646 CTTGTGAGGG-GCAGAGGCTG-----GAGCAATGGGG-AGGG------------GGTGTTTCGAGGAATGGAGATAATGAGTGACTTCGGAAACACTTCTGTTTAA-TTCACTCTCGATTGATTGTTAAGAAAAAAAGAAAAGATTCCGTTGCCTACAGCAAAGAGTCAATCTTA---------CGGAG-------CCCCGGGTTCACCCGCTTCATCTTTCATCT----GTGCT--GCGCTCACGGA-TTTTAATCAGTTGCAGGAGACCCTTTCAGATGTAATGGTGTAGAGGTCAACGTGGGTCACGTTTTAAAAGGG---GGCG-CTCAGGGAGGGAAGGAAGAAACGGGGACACTTGTCATGATCA---CAGCCGGGAGGAGAAATG---GATCTGCTTGGCTTGg---agaaagagg-----gaaggagagacagagagag----------------------------ggacacag i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1397958 394 + 3144229 CTTGTGAGGG-GCAGAGGCTG-----GAGCAATGGGG-AGGG------------GCTGTTTCGAGGAACGGAGATAATGAGTGACTTCGGAAACACTTCTGTTTAA-TTCACTCTCGATTGATTGTTAAGAAAAAAAGAAAAGATTCCGTTGCCTACAGCAAAGAGTCAATCTTA---------CAGAG-------CCCCCGGTTCACCCGCTTCATCTTTCATCT----GTGCT--GCGCTCACGGA-TTTTAATCAGTTGCAGGAGACCCTTTCAGATGTAATGGTGTAGAGGTCAACGTGGGTCACGTTTTAAAAGGG---GGCG-CTCAGGGAGGGAAGGAAGAAACGGGGACACTTGTCATGGTCA---CAGCCGGGAGGAGAAATG---GATCTGCTGGGCTTGg---agaaagagg-----gaaggagagacagagagag----------------------------ggacacag i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96685380 394 + 98384682 CTTGTGAGGG-GCAGAGGCTG-----GAGCAATGGGG-AGGG------------GCTGTTTCGAGGAATGGAGATAATGAGCGTCTTCGGAAACACTTCTGTTTAA-TTCACTCTTGATTGATTGTTAAGAAAAAAAGAAAAGATTCCGTTGCCTACAGCAAAGAGTCAATCTTA---------CGGAG-------CCCCCGGTTCACCCGCTTCATCTTTCATCT----GTGCT--GTGCTCACGGA-TTTTAATCAGCTGCAGGTGACCCATTCAGATGTAATGGTGTGGAGGTCAACATGGGTCACGTTTTAAAAGGG---GGCG-CTCAGGGAGGGAAGGAAGAAACAGGGACACTTGTCATGATCA---CAGCCGGGAGGAGAAATG---GATCTGCTTGGCTTGg---agaaagagg-----gaaggagagacagagagag----------------------------ggacacag i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8221548 394 - 10857215 CTTGTGAGGG-GCAGAGGCTG-----GAGCAATGGGG-AGGG------------GCTGTTTCGAGGAACGGAGATAATGAGTGACTTCGGAAACACTTCTGTTTAA-TTCACTCTCGATTGATTGTTAAGAAAAAAAGAAAAGATTCCGTTGCCTACAGCAAAGAGTCAATCTTA---------CGGAG-------CCCCCGGTTCACCCGCTTCATCTTTCATCT----GTGCT--GCGTTCACGGA-TTTTAATCAGTTGCAGGAGACCCTTTCAGATGTAATGGTGTAGAGGTCAACGTGGGTCACGTTTTAAAAGGG---GGCG-CTCAGGGAGGGAAGGAAGAAACGGGGACACTTGTCATGATCA---CAGCCGGGAGGAGAAATG---GATCTGCTGGGCTTGg---agaaagagg-----gaaggagagacagagagag----------------------------ggacacag i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15614156 394 - 23502949 CTTGTGAGGG-GCAGAGGCTG-----GAGCAATGGGG-AGGG------------GCTGTTTCGAGGAATGGAGATAATGAGCGTCTTCGGAAACACTTCTGTTTAA-TTCACTCTTGATTGATTGTTAAGAAAAAAAGAAAAGATTCCGTTGCCTACAGCAAAGAGTCAATCTTA---------CGGAG-------CCCCCGGTTCACCCGCTTCATCTTTCATCT----GTGCT--GCGCTCAGGGA-TTTTAATCGGTTGCAGGTGACCCATTCAGATGTAATGGTGTGGAGGTCAACGTGGGTCACGTTTTAAAAGGG---GGCA-CTCAGGGAGAGAAGGAAGAAACGGGGACACTCATCATGATCA---CAGCCGGGAGGAGAAATG---GATCTGCTGGGCTTGg---agaaagagg-----gaaggagagacagagagag----------------------------ggacacag i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169889462 382 + 171630274 CGTGTGAGGG-GCAGTGGCTG-----GAGCAATGGGGAAGGG------------GCTGCTTTGAGGAATGGAGCTAATGAGCGTCTTCAGAAACGCTTCTGTTTAG-TTCATTCTCGATTGACTGTTCAG-ACAAAAGGAATGATTCCGTTACCTACAGCGGAGAGTCAATCTCTCAGACTCATGGAGG-------CCCC-GG---------TTCATCTTTCTTCC----GTACT--GCACTGGTGGA-GTTTAATGAGTTGCAGGCGACCCACGCAGATGTCATGGTGTGGAGGTCAATGTGGGTCAAGTTTAAAAA-GG---GGTG-CTCAGACAGAGAAGGAACAAATGAGGACACTTGTCATGATCA---CAGCCAGGAAGAGAAAAG---GATCTACTGGGCTTGG---TGAAAGAGG-------------GACAGAGA--G----------------------------GGAGACAG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1296409 388 - 2905041 CGTGCGAGGG-GCACAGGCTG-----GAGCAGTGGGGAAGGG------------GCTGCTTCGAGGAATGGAGGTAATGAGCGTCTTCAGAAACCCTTCTGTTTAA-TTCATTCTTGATTGATTGTTCAGAAAAAAAGGAAAGATTCCGTTGCCTACAGCGGAGAGTCAA--TCTCAGATTCACGGAGG-------CCCCTGG---------TTCATCTTTCATCCACCAGCGCT--GCGCTGGTGGA-GTTTAATGAGTTGCAGGCAACC--CGCAGATGTCATGGTGTGGAGGTCAATGTGGGTCAAGTTTAAAAA-GG---GACG-CTCAGGCAAGGAAGGAACGAATGAGGACACTTGTCATGATCA---CAGCGGGGAAGAGAAAAG---GATCTGCTGGATTTGg---aggaagagg-----gaa----agacagaga--g----------------------------ggagacag i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1260585 388 - 2164891 CATGTGAGGG-GCAGAGGCTG-----GAGCAATGGGGAAGGG------------GCTGCTTCAAGGAATGGAGGTAATGAGCATCTTCAGAAACCCTTCTCTTTAA-TTCATTCTTGATTGATTGTTCAGAAAAAAAGGAAAGATTCTGTTACCTACAGCGCAGACTCAATCTCTCAGATTCACGGAGG-------CCCCTGG---------TTCATCTTTCATCC----GCGCT--GTGCTGGTGGA-GTTTAATGAGTTGCAGGCGACCCACGCAGATGTCATGGTGTGCAGGTCAGTGTGGGTCAAGTTTAAAAA-GG---GGCG-CTCAGGCAGAGAAGGAACAAATGAGGACACTTGTCATGATCA---CAGCCGGGAAGAAAAAAT---GATCTGCTGGCCTTGg---agaaagagg-----gaa----agacagaga--g----------------------------ggagacag i cebCap1.NW_016107695v1 I 122 C 0 s aotNan1.NW_018494782v1 1509792 370 - 1813869 CGTGTGAGGG-GCAGAGGCTG-----GAGCAATGGGGAAGGG------------GCTGCTTCGAGGAATGGAGGTAATGAGCATCTTCAGAAACCCTTCTGTTTAA-TTCATTC----TTGATTGTTCAGAAAAAAAGGAAAGATTCCATTGCCTACAGTGGAGAGTCAATCTCTCAGATTCACAGCGG-------CCCCTGG---------TTCATCTTTCATCC----TCGAT--GCGCTGGTGGA-GTTTAATGAGTTGCAGGCGACCCAAGCGGATGTCATGGTGTGGAAGTCAATGTGGGTCAAGTTTAAAAA-GA---GGCG-CTCAGGCAGAGAAGGAACAAATGAGGACACTTGTCATGATCA---CAGCCGGGAAGAGAAAAG---GATCTGCTGGGCTTGG---AGAAAGAGG-----------------------------------------------------GAGACAG i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10952067 385 - 12073884 ------------CGCAGGAGG-----GCGCAGAGAGG-------------------------TAGGAAGGGAGATAATGAGCCTCCTCAGAAAC-CTTCTGTTTAACTTTGCTCTTGATTAATTGTTAAGAAAAAA---GAAGATTTCACTGCCTACAGCTAAGGGCCCGTCTGG-GGAGTTGTCTGTA-------CCCT------------GCCACCTTTGTCCT----GGGTG--GTGTTCG-AGA-TCTTAACT-GCCGCAGACAAGCCATGCGCTTGTGAC--TGTGGAGGCTGACGTGTGTGAAGTGTGTAGA-AA---GGGG-CTGGGGGTGAGAACAGGGAAATGCGG---------ATGATCA---CAGC-GGGAAGGAACATG---TGTCTGCTGGGCCTGGGCAGGAGAGAGGCAGAGGACGGGCAGACAGACGAAGAGTTTGCCACttttatttttatttttttagagacag i otoGar3.GL873575 C 0 I 142 s dasNov3.JH569188 574672 407 + 760995 CTTATGAGGGTGCAAAGAGAGATACTAAGTAATGGGA-TGGGAGAAGAGAGAGTGGTGTTTTCAGAAACGGAGATAATGAGTGTCTTCAGAAAC-CTTCTGTTTAAAGTCACTCTTGATTGATTGTTAAGGAAAAAAAAAAAGATTGAGTTGCCTACAGCTAAGAACCAATCTGATGGAGTCATCTAAGTTTGTTTCCCTCCCTTCTACCACCTCCTCTTTCATCT----ATGCTAAGTGTTCATAGATTTTTAATAACTTGCAGATGATCCTTTTAAACCAAACAGCGTGGAGGCCGATTTGTG-AAAGTTAAAAACAGGAATGGGA-TTCAGAACAAAAAGGAAGAAAAGG-------TGCTGTGATTAGACCAACGAGGAAGAGAAATGTATTATCTGCTGGATTTGA---AAATAAAAA-----GA----------------------------------------------------- i dasNov3.JH569188 C 0 C 0 e canFam3.chr1 56173082 6728 + 122678785 I a score=314753.000000 s hg38.chr6_KB021644v2_alt 108284 34 + 185823 aggggagagagGGCACTATCTG-CCCCACCTTGTC s panTro5.chr6 173559381 34 + 175400573 aggggagagagGGCACCATCTG-CCCCACCTTGTC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171798447 34 + 173848474 aggggagagagGGCACCATCTG-CCCCACCTTGTC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11480913 34 - 12463322 aggggagagagGGCACCATCTG-CCCCACCTTGTC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156306724 34 + 157873769 aggagagagagGGCACCATCTC-CCCCACCTCGTC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170335296 34 + 172585720 agaggagagagGGCACCGTCTC-CCCCACCTCGTC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169080993 34 - 170955103 agaggagagagGGCACCGTCTC-CCCCACCTCGTC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8367239 34 + 10161646 agaggagagagGGCACCGTCTC-CCCCACCTCGTC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1398352 34 + 3144229 agaggagagagGGCACCATCTC-CCCTACCTCGTC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96685774 34 + 98384682 aggggagagagGGCACCGTCTC-CCCCACCTCGAC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8221942 34 - 10857215 agaggagagagGGCACCGTCTC-CCCCACCTTGTC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15614550 34 - 23502949 aggcgagagagGGCACCGTCTC-CCCCACCTCCTC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169889844 33 + 171630274 AAGGGAGAGAGGACACCATCT--CCTCACCTCCCC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1296797 33 - 2905041 -agggagagagGACACCGTCTC-CCCCACCTCATG i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1260973 34 - 2164891 aagggagagagGACACCATCTC-CCCCACCTCAGC i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1510162 34 - 1813869 AAGGGAGAGAGGACACCATCTC-CCCCACCTCACC i aotNan1.NW_018494782v1 C 0 I 15 s dasNov3.JH569188 575079 26 + 760995 ---------TGAGCGCAATCTCACCTCACCTCTTC i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10952452 142 - 12073884 I e canFam3.chr1 56173082 6728 + 122678785 I a score=75843.000000 s hg38.chr6_KB021644v2_alt 108318 15 + 185823 TGGATGG--CGCCACCC-------------- s panTro5.chr6 173559415 15 + 175400573 TGGATGG--CGCCACCC-------------- i panTro5.chr6 C 0 C 0 s panPan2.chr6 171798481 15 + 173848474 TGGATGG--CGCCACCC-------------- i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11480947 15 - 12463322 TGGATGG--CGCCACCC-------------- i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156306758 15 + 157873769 CGGATGG--TGCCACCC-------------- i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170335330 15 + 172585720 CAGATGG--TGCCACTC-------------- i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169081027 15 - 170955103 CAGATGG--TGCCACTC-------------- i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8367273 15 + 10161646 CAGATGG--TGCCACTC-------------- i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1398386 15 + 3144229 CAGATGG--TGCCACTC-------------- i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96685808 15 + 98384682 GAGATGG--TGCCACTC-------------- i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8221976 15 - 10857215 CAGATGG--TGCCACTC-------------- i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15614584 15 - 23502949 CAGATGG--CGCCACTC-------------- i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169889877 16 + 171630274 TGGGTGA-CTGCCACGT-------------- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1296830 16 - 2905041 CAGGTGG-CTGCCACGT-------------- i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1261007 16 - 2164891 CGGGTGA-CTGCCACGT-------------- i cebCap1.NW_016107695v1 C 0 C 0 s dasNov3.JH569188 575105 28 + 760995 ---CTGGCCTTCCTCTCATAAATCTGCATCT i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10952452 142 - 12073884 I e aotNan1.NW_018494782v1 1510196 15 - 1813869 I e canFam3.chr1 56173082 6728 + 122678785 I a score=2677.000000 s hg38.chr6_KB021644v2_alt 108333 1 + 185823 A s panTro5.chr6 173559430 1 + 175400573 A i panTro5.chr6 C 0 C 0 s panPan2.chr6 171798496 1 + 173848474 A i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11480962 1 - 12463322 A i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156306773 1 + 157873769 G i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170335345 1 + 172585720 G i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169081042 1 - 170955103 G i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8367288 1 + 10161646 G i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1398401 1 + 3144229 G i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96685823 1 + 98384682 G i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8221991 1 - 10857215 G i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15614599 1 - 23502949 G i colAng1.NW_012114488v1 C 0 C 0 s otoGar3.GL873575 10952594 1 - 12073884 A i otoGar3.GL873575 I 142 I 22 s dasNov3.JH569188 575133 1 + 760995 A i dasNov3.JH569188 C 0 C 0 e saiBol1.JH378287 1296846 0 - 2905041 C e aotNan1.NW_018494782v1 1510196 15 - 1813869 I e cebCap1.NW_016107695v1 1261023 0 - 2164891 C e calJac3.chr4 169889893 0 + 171630274 C e canFam3.chr1 56173082 6728 + 122678785 I a score=1068453.000000 s hg38.chr6_KB021644v2_alt 108334 113 + 185823 ------------------------------GGGCGGAGAGA-GGTCGCACTTCTTTAACACTGAGACGGCCAGGATTTTGAGGGACAGCTCTGAACCG--GCTGATTTGTAGGGAACTAGAATTGTTA-TT--CTTGTGTTTTTT-GCTA s panTro5.chr6 173559431 113 + 175400573 ------------------------------GGGCGGAGAGA-GGTCGCACTTCTTTAACACTGAGACGGCCAGGATTTTGAGGGACAGCTCTGAACCG--GCTGATTTGTAGGGAACTAGAATTGTTA-TT--CTCGTGTTTTTT-GCTA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171798497 113 + 173848474 ------------------------------GGGCGGAGAGA-GGTCGCACTTCTTTAACACTGAGACGGCCAGGATTTTGAGGGACAGCTCTGAACCG--GCTGATTTGTAGGGAACTAGAATTGTTA-TT--CTCGTGTTTTTT-GCTA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11480963 113 - 12463322 ------------------------------GGGCGGAGAGA-GGTCGCACTTCTTTAACACTGAGACGGCCAGGATTTTGAGGGACAGCTCTGAACCG--GCTCATTTGTAGGGAACTAGAATTGTTA-TT--CTTGTGTTTTTT-GCTA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156306774 113 + 157873769 ------------------------------GGGCAGGGAGA-GGTCGCACTTCTTTAACACTGAGACGGCCAGGATTTTGAGGGACAGCTCTGAACCA--GCTGATTTGTAGGGAACTAGAATTGTTA-TT--CTTGTGTTTTTT-GCTA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170335346 113 + 172585720 ------------------------------GGGCGGGGAAA-GGTCGTGCTCCTTTAACACTGAGACAGCCAGGATTTTGAGGGACAGCTCTGAACCA--GTTGATTTGTAGGGAACTAGAATTGTTG-TT--CTTGTGTTTTTT-GCTG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169081043 113 - 170955103 ------------------------------GGGCGGGGAAA-GGTCGTGCTCCTTTAACACTGAGACAGCCAGGATTTTGAGGGACAGCTCTGAACCG--ATTGATTTGTAGGGAACTAGAATTGTTG-TT--CTTGTGTTTTTT-GCTG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8367289 113 + 10161646 ------------------------------GGGCGGGGAAA-GGTCGTGCTCCTTTAACACTGAGACAGCCAGGATTTTGAGGGACAGCTCTGAACCA--GTTGATTTGTAGGGAACTAGAATTGTTG-TT--CTTGTGTTTTTT-GCTG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1398402 113 + 3144229 ------------------------------GGGCGGGGAGC-GGTCGCGCTCCTTTAACACTGAGACAGCCAGGATTTTGAGGGACAGCTCTGAACTG--ATTGATTTGTAGGGAACTAGAATTGTTG-TT--CTTGTGTTTTTT-GCTA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96685824 113 + 98384682 ------------------------------GGGCGGGGAGC-GGTCGCACTCCTTTTACACTGAGACAGCCAGGATTTTGAGGGACAGCTCTGAACTG--GCTGATTTGTAGGGAACTAGAATTGTTG-TT--CTTGTGTTTTTT-GCTA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8221992 113 - 10857215 ------------------------------GGGCGGGGAGC-GGTCGCGCTCCTTTAACACTGAGACAGCCAGGATTTTGAGGGACAGCTCTGAACTG--ATTGATTTGTAGGGAACTAGAATTGTTG-TT--CTTGTGTTTTTT-GCTA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15614600 113 - 23502949 ------------------------------GGGCGGGGAGC-GGTCGTGCTTCTTTAACACTGAGACAGCCAGGATTTTGAGGGACAGCTCTGAACCG--GCTGATTTGTGGGGAACTAGAATTGTTG-TT--CTTGTGTTTTTT-GCTA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169889893 106 + 171630274 ------------------------------GGGCGGGGAG--GGTC---CTTCTTTAACACTGAGATGGTCAGGATTTTGA-AGAGAGCTCTGAACCC--GCTGATTTGTAGGAAGT--GAATTGTTATTT--CTT-TGGGTTTT-GCTA i calJac3.chr4 C 0 M 3708 s saiBol1.JH378287 1296846 105 - 2905041 ------------------------------GGGTGGGGAG--GGTC------CTTTAACACTGAGATGGCCAGGATTTTGAGGGATAGCTCTGAACCA--GCTGATTTGTAGGAAACTGGAATTGTTA-TT--CTT-TGGTTTTT-GCTA i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1261023 108 - 2164891 ------------------------------GGGTGGGGAG--GGTC---CTTCTTTAACACTGAGATGGCCAGCATTGTGAGGGATAGCTCTGAACCA--GCTGACTTGTAGGGAACTGAAATTGTTA-TT--CCT-TGGTTTTT-GCTA i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1510211 108 - 1813869 ------------------------------GGGTGGGGAG--GGTC---CTTCTTTAACACTGAGATGGCCAGGATTTTGAGGGGTAGCTCCGAACCA--GCTGATTTGTAGGGAACTGGAATTGTTA-TT--CTT-TGGTTTTT-GCTA i aotNan1.NW_018494782v1 I 15 C 0 s otoGar3.GL873575 10952617 100 - 12073884 ------------------------------GGGTGGGCAGGTGGTC-------------ACTGAGATAGCCAGGATGCTAAGGGATAGCTCAGGAT-----GTCATTTTTAGGGAACTAGGATTGTCA-TTTATTTTTATTTTTA-CCTA i otoGar3.GL873575 I 22 C 0 s dasNov3.JH569188 575134 144 + 760995 GTGAAAAGAAAGCAATGACTTTCCACAATCTGGTGGGGAGTTAGTTATACTTTTGTAAAAATGAAATGACCAGGGATTTGACGGGCAGGACTGGGATGTCATTTATTT---GGAAAGGAGGATTGCTA-TC--TAAGTGCTTTTCAGCTA i dasNov3.JH569188 C 0 C 0 e canFam3.chr1 56173082 6728 + 122678785 I a score=2182512.000000 s hg38.chr6_KB021644v2_alt 108447 268 + 185823 CCACCAAGGAGTTCTCCACAGAGGCCCATCTCTCAGGTGGGTTCTACGAGGCTTCACA-CTCCCGCACTGCAGTTTTGTGG---CTCCATGGCTGCTATGGGACCGTCATGCTGGGGAGGCTGCAGAAGGGGGTGCGGGGCCCTC-TTTAGATGGAAGAGGGAAGAGCCAGCC---TCATCCCCCTCAAGGACAAAG-GCCTGC-------CTG------------CTGCATCCCCCTCCC---------GCTTCTGG----------GGGGTCT-TTGTGAAGAAAAACTTA----CAGTGTGGTCTTG----TGTGATTTTT s panTro5.chr6 173559544 267 + 175400573 CCACCAAGGAGTTCTCCACAGAGGCCCATCTCT-AGGTGGGTTCTACGAGGCTTCACA-CTCCTGCACCGCAGTTTTGTGG---CTCTATGGCTGCTATGGGACCGTCATGCTGGGGAGGCTGCGGAAGGGGGTGCGGGGTCCTC-TTTAGATGGAAGAGGGAAGAGCCAGCC---TCATCCCCCTCAAGGACAAAG-GCCTGC-------CTG------------CTGCATCCCCCTCCC---------GCTTCTGG----------GGGGTCT-TTGTGAAGAAAAACTTA----CAGTGTGGTCTTG----TGTGATTTTT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171798610 267 + 173848474 CCACCAAGGAGTTCTCCACAGAGGCCCATCTCT-AGGTGGGTTCTACGAGGCTTCACA-CTCCTGCACCGCAGTTTTGTGG---CTCTATGGCTGCTATGGGACCGTCATGCTGGGGAGGCTGCGGAAGGGGGTGCGGGGTCCTC-TTTAGATGGAAGAGGGAAGAGCCAGCC---TCATCCCCCTCAAGGACAAAG-GCCTGC-------CTG------------CTGCATCCCCCTCCC---------GCTTCTGG----------GGGGTCT-TTGTGAAGAAAAACTTA----CAGTGTGGTCTTG----TGTGATTTTT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11481076 267 - 12463322 CCACCAAGGAGTTCTCCACAGAGGCCCATCTCTCAGGTGCGTTCTACGAGGCTTCACA-CTCCCGCACCGCAGTTTTGTGG---CTCTGTGGCTGCTATGGGACCGTCGTGCTGGGGAGGCTGCGGAAGGGGGTGCGGGGCGC-C-TTTAGATGGAAGAGGGAAGAGCCAGCC---TCATCCCCCTCAAGGACAAAG-GCCTGC-------CTG------------CTGCATCCCCCTCCC---------GCTTCTGG----------GGGGTCT-TTGTGAAGAAAAACTTA----CAGTGTGGTCTTG----TGTGATTTTT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156306887 272 + 157873769 CCACCAAGGAGTTCTCCACAGAGGCCCACCTCTCAGGTGCGTTCCACGAGGCTTCACA-CTCCCACACCACGGTTTCGTGG---CTCTGTGGCTGCTGTGGGACCATCATGCCGGGGAGGCTGTGGAAGCGGGTGCGGGGCGCTC-TTTAGATGGAAGAGGGAAGAGCCAGCC---TCATCCCTCTCAAGGACAAAG-GCCTGC-------TTG------------CTGCATCCTCCTCCC---------CCTTCTGG----------GGGGTCT-TTGTGAAGAAAAACTTACAGTCAGTGTGGTCTTG----TGTGATTTTT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170335459 267 + 172585720 CCACCAAGGAGTTCTCCACAGAGACCCATCTCTCAGGTGTGTTCCATGAGGCTTCAGA-CTCCCACACTGCTGTTTCGTGG---CTCTGTGGCTGCTGTGGGACCATCCTGCT-GGGAGGCTGCGGAACGGGGTGCGGGGCGCTC-TTCAGATGGAAGAGGGAAGAGCCAGCC---GCATCCCCCTCAAGGACAAAG-CACTGC-------CTG------------CTGCATCCCTGTCCC---------CCTTCTGG----------GGGGTCT-TAGTGAAGAAAAACTCA----CAGTGTGGTCTTG----TGTGATTTTT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169081156 267 - 170955103 CCACCAAGGAGTTCTCCACAGAGGCCCATCTCTCAGGTGTGTTCCAGGAGGCTTCAGA-CTCCCACACTGCTGTTTCGTGG---CTCTGTGGCTGCTGTGGGACCATCCTGCT-GGGAGGCTGCGGAACGGGGTGCGGGGCGCTC-TTCAGATGGAAGAGGGAAGAGCCAGCC---GCATCCCCCTCAAGGACAAAG-CACTGC-------CTG------------CTGCATCCCTGTCCC---------CTTTCTGG----------GGGGTCT-TAGTGAAGAAAAACTCA----CAGTGTGGTCTTG----TGTGATTTTT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8367402 267 + 10161646 CCACCAAGGAGTTCTCCACAGAGGCCCATCTCTCAGGTGTGTTCCATGAGGCTTCAGA-CTCCCACACTGCTGTTTCGTGG---CTCTGTGGCTGCTGTGGGACCATCCTGCT-GGGAGGCTGCGGAAGCGGGTGCGGGGCGCTC-TTCAGATGGAAGAGGGAAGAGCCAGCC---GCATCCCCCTCAAGGACAAAG-CACTGC-------CTG------------CTGCATCCCTGTCCC---------CCTTCTGG----------GGGGTCT-TAGTGAAGAAAAACTCA----CAGTGTGGTCTTG----TGTGATTTTT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1398515 265 + 3144229 CCACCA---AGTTCTCCACGGAGGCCCATCTCTTAGGTGTGTTCCATGAGGCTTCAGA-CTCCCACACTGCTGTTTCGTGG---CTCTGTGGCTGCTGTGGGACCATCCCGCTGGGGAGGCTGCAGAAGCGGGTGCGGGGCGCTT-TTCAGATGGAAGAGGGAAGAGCCAGCC---GCATCCCCCTCAAGGACAAAG-CACTGC-------CTG------------CTGCATCCCTGTCCC---------CCTTCTGG----------GGGGTCT-TAGTGAAGAAAAACTTA----CAGTGTGGTCTTG----TGTGATTTTT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96685937 265 + 98384682 CCACCA---AGTTCTCCACGGAGGCCCATCTCTCAGGTGTGTTCCACGAGGCTTCAGA-CTCCCACACTGCCGTTTCGTGG---CTCTGTGGCTGCTGTGGGACCATCCTGCTGGGGAGGCTGCGGAAGGGGGTGTGGGGTGCTC-TTCAGATGGAAGAGGGAAGAGCCAGCC---GCACCCCCCTCAAGGACAAAG-CGCTGC-------CTG------------CTGCATCCCTGTCCC---------CCTTCTGG----------GGGGTCT-TTGTGAAGAAAAACTTA----CAGTGTGGTCTTG----TGTGATTTTT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8222105 265 - 10857215 CCACCA---AGTTCTCCACGGAGGCCCATCTCTCAGGTGTGTTCCATGAGGCTTCAGA-CTCCCACACTGCTGTTTCGTGG---CTCTGTGGCTGCTGTGGGACCATCCCGCTGGGGAGGCTGCAGAAGCGGGTGCGGGGCGCTT-TTCAGATGGAAGAGGGAAGAGCCAGCC---GCATCCCCCTCAAGGACAAAG-CACTGC-------CTG------------CTGCATCCCTCTCCT---------CCTTCTGG----------GGGGTCT-TAGTGAAGAAAAACTCA----CAGTGTGGTCTTG----TGTGATTTTC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15614713 268 - 23502949 CCACCAAGGAGTTCTCCACGGAGGCCCATCTCTCAGGTGTGTTCCATGAGGCTTCAGA-CTCCCACACTGCTGTTTCGTGG---CTCTGTGGCTGCTGTGGGACCATCCTGCTGGGGAGGCTGTGGAAGGGGGTGCGGGGCGCTC-TTCAGATGGAAGAGGGAAGAGCCAGCC---GCATCCCCCTCAAGGACAAAG-CACTGC-------CTG------------CTGCATCCCTGTCCC---------CCTTCTGG----------GGGGTCG-TAGTGAAGAAAAACTTA----CAGTGTGGTCTTG----TGTGATTTTT i colAng1.NW_012114488v1 C 0 C 0 s saiBol1.JH378287 1296951 276 - 2905041 GCACCAAGGAATTCTCCACAGAGGCCCATCTCTCAGGGGTGGACCCCAAGGCTTCACA-CTCCTGTATCA-GGTTTCCTGG---CTCTGTGGCGGCTGTGGGGCCATCATGCTGGGGAGGCTGTGGAAGGGGGCGCAGGGCGCTG-TTTAGACAGAAGAGGGAAGACCCAGCC---ACGTCCTCCTCCAGGACAAAG-TCCTGC-------CTG------------CTGCATCCCACTTCT---------GCTTCTGGTGGTGGTGGTGAGGTCT-TTGCGAAGAAAAGCTTA----CAGCGTGGTCTAG----TGTGATTTT- i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1261131 276 - 2164891 GCACCGAGGAGTTCTCCACAGAGGCCCGTCTCTCAGGGGTGGACCCCAAGGCTTCACA-CTCCTGTATCA-GGTTTCCTGG---CTCTGTGGCGGCTGTGGGGCCATCATGCTGGGGAGGCTGCGGAAGCGGGTGCAGGGTGCTG-TTTAGACAGAAGAGGGAAGACCCAGCC---ACATCCCCCTCCAGGGGAAAG-TCCTGC-------CTG------------CTGCATCCCATTGCT---------GCTTCTGGTGGTGGTGGTGAGGTCT-TTGTGAAGGAAAACTTA----CAGTGTGGTCTTG----TGTGATTTT- i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1510319 275 - 1813869 GCACCAAGGAGTTCTCCAC-GAGGCCCATCTCTCAGGGGTGGACCCCAAGGCTTCACA-CTCCTGTATCA-GGTTTCCTGG---CTCTGTGGCAGCTGTGGGGCCATCATGCTGGGGAGGTTGTGGAAGGGGGTGTGGGGTGCTG-TTTAGATAGAGGAGGGAAGACCCAGCC---ACATCACCCTCCAGGACAAAG-TCCTGC-------CTG------------CTGCATCCTGCTCCT---------GCTTCTGGTGGTGGTGGTGGGGTCT-TTGTGAAGAAGAACTTA----CAGTGTGGTCTTG----TGTGATTTT- i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10952717 245 - 12073884 CTATGAAAGAATTCTCCAAAGAAGCTAATTTATCTGGTAGAGAAAAAGGAACTTCACA-CATCTGTGCCCC------------------TGGCCACTGTAGGACCACCCTGTT-GGGAAGCTGGGGGGCAGGG----AGGGACGA-TATGGACAAAAGAGGG--GGAGCACCC---GGACACCCCTCAGGCCCAGGGTCCCTGT-------CTG------------------ACAACTGGG---------CCTCCTGG----------AGGGTCT-GTGTGAAGAAGACCCCA----CGGTGTGGACCCGTCGTTCTGATTTTT i otoGar3.GL873575 C 0 I 165 s dasNov3.JH569188 575278 297 + 760995 TGACTAAAGAG-TCTCGAAATAGGCTGAGCTACTAGGTAGAGACAAGAAGTACCCACAGTTTCTATATAAATGTTTAATAGTTACTTTGTGTTCATAATCAGACCATCAtgttggggaaactg-------aattgaggggcatttatttaagtacaaaagggatgaactatactgaacatccatttaaaggacttag-ttttgctgtcagactatataacataagccggcacccctctttctttttctttgcctctgt----------gtagtgtcttgtgaaggtaCGGTCA----CAGGCTTGCCTCA----AATTATTTTT i dasNov3.JH569188 C 0 C 0 e calJac3.chr4 169889999 3708 + 171630274 M e canFam3.chr1 56173082 6728 + 122678785 I a score=88395.000000 s hg38.chr6_KB021644v2_alt 108715 10 + 185823 ACTTTATGTT s panTro5.chr6 173559811 10 + 175400573 ACTTTATGTT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171798877 10 + 173848474 ACTTTATGTT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11481343 10 - 12463322 ACTTTATGTT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156307159 10 + 157873769 ACTTTATGTT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170335726 10 + 172585720 ACTTGATGTT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169081423 10 - 170955103 ACTTGATGTT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8367669 10 + 10161646 ACTTGATGTT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1398780 10 + 3144229 GCTTTATGTT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96686202 10 + 98384682 ACTTTATGTT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8222370 10 - 10857215 ACTTTATATT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15614981 10 - 23502949 ACTTTATGTT i colAng1.NW_012114488v1 C 0 C 0 s saiBol1.JH378287 1297227 10 - 2905041 ACTTTACGTT i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1261407 10 - 2164891 ACTTTATGTT i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1510594 10 - 1813869 ACTTTACGTT i aotNan1.NW_018494782v1 C 0 C 0 s dasNov3.JH569188 575575 10 + 760995 ACTTCTTTTT i dasNov3.JH569188 C 0 I 2717 e otoGar3.GL873575 10952962 165 - 12073884 I e calJac3.chr4 169889999 3708 + 171630274 M e canFam3.chr1 56173082 6728 + 122678785 I a score=1021991.000000 s hg38.chr6_KB021644v2_alt 108725 116 + 185823 AGGGCAAATGTATTCAAATTAC---GGCTCTAAAGGACGTGAGGGTTATTCCAGTCTGAGTTTTAGCTTTTAGCTTTGATTTCCTAAATACAGAGGTAATAAAATATTTTCTATTTCTT s panTro5.chr6 173559821 116 + 175400573 AGGGCAAATGTATTCAAATTAT---GGCTCTAAAGGACGTGAGGGTTATTCCAGTCTGAGTTTTAGCTTTTTGCTTTGATTTCCTAAATACAGAGGTAATAAAATATTTTCTATTTCTT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171798887 116 + 173848474 AGGGCAAATGTATTCAAATTAC---GGCTCTAAAGGACATGAGGGTTATTCCAGTCTGAGTTTTAGCTTTTTGCTTTGATTTCCTAAATACAGAGGTAATAAAATATTTTCTATTTCTT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11481353 116 - 12463322 AGGGCAAATGTATTCAAATTAC---GGCTCTAAAGGACGTGAGGTTTATTCCAGTCTGAGTTTTAGCTTTTAGCTTTGATTTCCTAAATACAGAGGTAATAAAATATTTTCTATTTCTT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156307169 116 + 157873769 AGGGCAAATGTATTCAAATTAT---GGCTCTAAAGGACATAAGGGTTATTCCAGTCTGAGTTTTAGCTTTTAACTTTGGTTTCCTAAATACAGAGGCAATAAAATATTTTCTATTTCTT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170335736 116 + 172585720 AGGGCAAATGTATTCAAATTAT---GGCTCTAAAGGATGTGAGGGTTATTCCAGTCTGAGTTTTAGCTTTTAACTTTGGTTTCCTAAATATAGAGATAATAAAATATTTTCTATTTCCT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169081433 116 - 170955103 AGGGCAAATGTATTCAAATTAT---GGCTCTAAAGGATGTGAGGGTTATTCCAGTCTGAGTTTTAGCTTTTAACTTTGGTTTCCTAAATATAGAGATAATAAAATATTTTCTATTTCCT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8367679 116 + 10161646 AGGGCAAATGTATTCAAATTAT---GGCTCTAAAGGATGTGAGGGTTATTCCAGTCTGAGTTTTAGCTTTTAACTTTGGTTTCCTAAATATAGAGATAATAAAATATTTTCTATTTCCT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1398790 116 + 3144229 AGGGCAAATGTATTCAAATTAT---GGCTCTAAAGGACGTGAGGGTTATTCCAGTCTGAGTTTTAGCTTTTAACTTTGGTTTCCTAAATATAGAGGTAATAAAATATTTTCTATTTCCT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96686212 116 + 98384682 AGGGCAAATGTATTCAAATTAT---GGCTCTAAAGGACGTGAGGGTTATTCCAGTCTGAGTTTTAGCTTTTAACTTTGGTTTCCTAAATATAGAGGTAATAAAATATTCTCTATTTCCT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8222380 116 - 10857215 AGGGCAAATGTATTCAAATTAT---GGCTCTAAAGGACGTGAGGGTTATTCCAGTCTGAGTTTTAGCTTTTAACTTTGGTTTCCTAAATATAGAGATAATAAAATATTTTCTATTTCCT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15614991 116 - 23502949 AGGGCAAATGTATTCAAATTAT---GGCTCTAAAGGATGCGAGGGTTATTCCAGTCTGAGTTTTAGCTTTTAACTTTGGTTTCCTAAATACAGAGGTAATAAAATATTTTCTATTTCCT i colAng1.NW_012114488v1 C 0 C 0 s saiBol1.JH378287 1297237 119 - 2905041 AGGGAAAATGTATTTAAATTATTACGGCTGTAAAGGATGTGAGGGTTACTCCAGTCTGAGTTTTAGCTTTTAGCTTTGCTTTCCTAAATATAGAGGTAATAAAATATTTTCTATTACCT i saiBol1.JH378287 C 0 I 199 s cebCap1.NW_016107695v1 1261417 116 - 2164891 AGGGAAAATGTATTTAAATTAT---GGCTCTAAAGGATGTGAGGGTTATTCCAGTCTTAGTTTTAGCTTTTAGCTTTGCTTTCCTAAATATAGAGGTAATAAAATATTTTCTATTTCCT i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1510604 110 - 1813869 AGGGAAAA------TAAATTAC---GGCTCTAAAGGATGTGAGGGTTATTCCAGTCTGAGTTTTAGCGTTTAGCTTTGCTTTCCTAAATATAGAGGTACTAAAATATTTTCTATTTCCT i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10952962 165 - 12073884 I e calJac3.chr4 169889999 3708 + 171630274 M e dasNov3.JH569188 575585 2717 + 760995 I e canFam3.chr1 56173082 6728 + 122678785 I a score=761458.000000 s hg38.chr6_KB021644v2_alt 108841 88 + 185823 TGTATTACAGATTTGCTTTTTCACATTTAGATCTTTGAATCACAGATAACACAGATAATCACAGTAATGGAAGAAATCAAAGTAACTA s panTro5.chr6 173559937 88 + 175400573 TGTATTACAGATTTGCTTTTTCACATTTAGATCTTTGAATCACAGATAACACAGATAATCACAGTAATGGAAGAAATCAAAGTAACTA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171799003 88 + 173848474 TGTATTACAGATTTGCTTTTTCACATTTAGATCTTTGAATCACAGATAACACAGATAATCACAGTAATGGAAGAAATCAAAGTAACTA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11481469 88 - 12463322 TGTATTACAGATGTGCTTTTTCACATTTAGATCTTTGAATCACAGATAACGCAGATAATCACAGTAATGGAAGAAATCAAAGTAACTA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156307285 88 + 157873769 TGTATTACAGATTTGCTTTTTCACATTTAGATTTTTGAATCACAGATAACACAGATAATCACAGTAATGGAAGAAATCAAAGTAACTA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170335852 88 + 172585720 TGTATTACAGATTTGCTTTTTCGCATTTAGATGTTTGAATCACAGATAACACAGATAATCACAGTAATGGGAGAAATCAAAGTAGCTA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169081549 88 - 170955103 TGTATTACAGATTTGCTTTTTCGCATTTAGATGTTTGAATCACAGATAACACAGATAATCACAGTAATGGGAGAAATCAAAGTAGCTA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8367795 88 + 10161646 TGTATTACAGATTTGCTTTTTCGCATTTAGATGTTTGAATCACAGATAACACAGATAATCACAGTAATGGGAGAAATCAAAGTAGCTA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1398906 88 + 3144229 TGTATTACAGATTTGCTTTTTCGCATTTAGATCTTTGAATCACAGATAACACAGATAATCACAGTAATGGGAGAAATCAAAGTAGCTA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96686328 88 + 98384682 TGTATTACAGATTTGCTTTTTCACATTTAGATCTTTGAATCACAGATAACACAGATAATCACAGTAATGGGAGAAATCAAAGTAACTA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8222496 88 - 10857215 TGTATTACAGATTTGCTTTTTCGCATTTAGATCTTTGAATCACAGATAACACAGATAATCACAGTAATGGGAGAAATCAAAGTAGCTA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15615107 88 - 23502949 TGTATTACAGATTTGCTTTTTCGCATATAGATCTTTGAATCACAGATAACATAGATAATCACAGTAATGGAAGAAATCAAAGTAACTA i colAng1.NW_012114488v1 C 0 C 0 s saiBol1.JH378287 1297555 88 - 2905041 TGTATTAGAGTTTTGCTTTTTCACATGTAGAACTTTAAATCACAGATAACACATATAGTCACAGTAATAGAAGAAATCGAAGTAACTA i saiBol1.JH378287 I 199 C 0 s cebCap1.NW_016107695v1 1261533 88 - 2164891 TATATTAGAGTTTTGCTTTTTCACACGTAGAACTTTAAGTCACAGATAACACATATAGTCACTGTAACGGAAGAAATCAAAGTAACTA i cebCap1.NW_016107695v1 C 0 I 735 s aotNan1.NW_018494782v1 1510714 88 - 1813869 TGTATTAGAGTTTTGCTTTTTCACATGTAGAACTTTAAATCACAGATAACACATATAGTCACAATAACAGAAGAAATCAAAGTAACTA i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10952962 165 - 12073884 I e calJac3.chr4 169889999 3708 + 171630274 M e dasNov3.JH569188 575585 2717 + 760995 I e canFam3.chr1 56173082 6728 + 122678785 I a score=308659.000000 s hg38.chr6_KB021644v2_alt 108929 49 + 185823 AACACCACTCTGGAAAGGACAGAGACAACAGACCGAGTAGCTCAACTGC s panTro5.chr6 173560025 49 + 175400573 AACACCACTCTGGAAAGGACAGAGACAATCGACCGAGTAGCTCATCTGC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171799091 49 + 173848474 AACACCACTCTGGAAAGGACAGAGACAATCGACCGAGTAGCTCATCTGC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11481557 49 - 12463322 AACACTACTCTGGAAAGGACAGAGACAATAGACCGAGTAGCTCATCTGC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156307373 49 + 157873769 AACACTACTCTGGAAAGTACAGAGAAAATAGACCGAGTAGCTCATCTGC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170335940 48 + 172585720 AACATTACTCTGGCAAGGACAGAGA-AATAGACCGAGTAGCTCATCTGC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169081637 48 - 170955103 AACATTACTCTGGCAAGGACAGAGA-AATAGACCGAGTAGCTCATCTGC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8367883 48 + 10161646 AACATTACTCTGGCAAGGACAGAGA-AATAGACCGAGTAGCTCATCTGC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1398994 48 + 3144229 AACATTACTCTGGAAAGGACAGAGA-AATAGACCGAGTAGCTCATCTGC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96686416 48 + 98384682 AACATTACTCTGGAAAGGACAGAGA-AATAGACCAAGTAGCTCATCTGC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8222584 48 - 10857215 AACATTACTCTGGAAAGGACAGAGA-AATAGACCGAGTAGCTCATCTGC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15615195 46 - 23502949 AACATTACTCTAGAAAGGACAGAGA-AATAGACCGAGTAGCTCA--TGC i colAng1.NW_012114488v1 C 0 C 0 s saiBol1.JH378287 1297643 39 - 2905041 ----TGACTCTGGAAAGGAC------AATAGACCAAGAAGCTCATCTGT i saiBol1.JH378287 C 0 I 1854 s aotNan1.NW_018494782v1 1510802 43 - 1813869 AATATGACTCTGGAAAGGAC------TATAGACCAAGAAGCTCATCTGT i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10952962 165 - 12073884 I e cebCap1.NW_016107695v1 1261621 735 - 2164891 I e calJac3.chr4 169889999 3708 + 171630274 M e dasNov3.JH569188 575585 2717 + 760995 I e canFam3.chr1 56173082 6728 + 122678785 I a score=20069.000000 s hg38.chr6_KB021644v2_alt 108978 4 + 185823 TACC s panTro5.chr6 173560074 4 + 175400573 TACC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171799140 4 + 173848474 TACC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11481606 4 - 12463322 TACC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156307422 4 + 157873769 TAAC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170335988 4 + 172585720 TAAC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169081685 4 - 170955103 TAAC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8367931 4 + 10161646 TAAC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1399042 4 + 3144229 TAAC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96686464 4 + 98384682 TGAC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8222632 4 - 10857215 TAAC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15615241 4 - 23502949 TAAC i colAng1.NW_012114488v1 C 0 C 0 s saiBol1.JH378287 1299536 4 - 2905041 tact i saiBol1.JH378287 I 1854 C 0 s aotNan1.NW_018494782v1 1510845 4 - 1813869 TAAT i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10952962 165 - 12073884 I e cebCap1.NW_016107695v1 1261621 735 - 2164891 I e calJac3.chr4 169889999 3708 + 171630274 M e dasNov3.JH569188 575585 2717 + 760995 I e canFam3.chr1 56173082 6728 + 122678785 I a score=2912.000000 s hg38.chr6_KB021644v2_alt 108982 1 + 185823 G s panTro5.chr6 173560078 1 + 175400573 G i panTro5.chr6 C 0 C 0 s panPan2.chr6 171799144 1 + 173848474 G i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11481610 1 - 12463322 G i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156307426 1 + 157873769 G i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170335992 1 + 172585720 A i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169081689 1 - 170955103 A i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8367935 1 + 10161646 A i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1399046 1 + 3144229 A i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96686468 1 + 98384682 A i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8222636 1 - 10857215 A i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15615245 1 - 23502949 A i colAng1.NW_012114488v1 C 0 C 0 s saiBol1.JH378287 1299540 1 - 2905041 g i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1262356 1 - 2164891 G i cebCap1.NW_016107695v1 I 735 C 0 s aotNan1.NW_018494782v1 1510849 1 - 1813869 A i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10952962 165 - 12073884 I e calJac3.chr4 169889999 3708 + 171630274 M e dasNov3.JH569188 575585 2717 + 760995 I e canFam3.chr1 56173082 6728 + 122678785 I a score=369813.000000 s hg38.chr6_KB021644v2_alt 108983 38 + 185823 TGAGCATGTGTGTATACAGGTAAGTTGCTATGTACACA s panTro5.chr6 173560079 38 + 175400573 TGAGCATGTGTGTATACAGGTGAGTTGCTATGTACACA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171799145 38 + 173848474 TGAGCATGTGTGTATACAGGTGAGTTGCTATGTACACA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11481611 38 - 12463322 TGAGCATGTGTGTATACAGGTGAGTTGCTATGTATACA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156307427 38 + 157873769 TGAGCATGTGTGTATACAGGTGAGTTGCTATGTACACA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170335993 38 + 172585720 CGAGCATGTGTGTACACAGGTGAGTTGCTATGTACACA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169081690 38 - 170955103 CGAGCATGTGTGTACACAGGTGAGTTGCTATGTACACA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8367936 38 + 10161646 CGAGCATGTGTGTACACAGGTGAGTTGCTATGTACACA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1399047 38 + 3144229 CGAGCATGTGTGTACACAGGTGAGTTGCTATGTACACA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96686469 38 + 98384682 CAAGCATGTGTGTATACAGGTGAGTTGCTATGTACACA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8222637 38 - 10857215 CGAGCATGTGTGTACACAGGTGAGTTGCTATGTACACA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15615246 38 - 23502949 CGAGCCTGTGTGTACACAGGTGAGTTGCTATGTACACA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169893712 37 + 171630274 TGAGCATGTGTGAATATAGGTGAGTCACTATG-ACACA i calJac3.chr4 M 3708 C 0 s saiBol1.JH378287 1299541 38 - 2905041 tgagcatgtgtgtacacaggtgagtcactatgaacata i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1262357 38 - 2164891 TGAGCATGTGTGTATACAGGTGAGTCACTATGAACACA i cebCap1.NW_016107695v1 C 0 I 113 s aotNan1.NW_018494782v1 1510850 38 - 1813869 TGAGCATGTGTGTATACAGGCGAGTCACTGTGAACACA i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10952962 165 - 12073884 I e dasNov3.JH569188 575585 2717 + 760995 I e canFam3.chr1 56173082 6728 + 122678785 I a score=10500.000000 s hg38.chr6_KB021644v2_alt 109021 1 + 185823 C s panTro5.chr6 173560117 1 + 175400573 C i panTro5.chr6 C 0 C 0 s panPan2.chr6 171799183 1 + 173848474 C i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11481649 1 - 12463322 C i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156307465 1 + 157873769 C i nomLeu3.chr3 C 0 I 2 s rheMac8.chr4 170336031 1 + 172585720 C i rheMac8.chr4 C 0 I 2 s macFas5.chr4 169081728 1 - 170955103 C i macFas5.chr4 C 0 I 492 s macNem1.NW_012011000v1 8367974 1 + 10161646 C i macNem1.NW_012011000v1 C 0 I 2 s cerAty1.NW_012002071v1 1399085 1 + 3144229 C i cerAty1.NW_012002071v1 C 0 I 2 s chlSab2.chr13 96686507 1 + 98384682 C i chlSab2.chr13 C 0 I 2 s manLeu1.NW_012106474v1 8222675 1 - 10857215 C i manLeu1.NW_012106474v1 C 0 I 2 s colAng1.NW_012114488v1 15615284 1 - 23502949 C i colAng1.NW_012114488v1 C 0 I 2 s calJac3.chr4 169893749 1 + 171630274 C i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1299579 1 - 2905041 c i saiBol1.JH378287 C 0 C 0 s aotNan1.NW_018494782v1 1510888 1 - 1813869 C i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10952962 165 - 12073884 I e cebCap1.NW_016107695v1 1262395 113 - 2164891 I e dasNov3.JH569188 575585 2717 + 760995 I e canFam3.chr1 56173082 6728 + 122678785 I a score=198881.000000 s hg38.chr6_KB021644v2_alt 109022 27 + 185823 GT-GTATATGTCCTAACATGAGCATACA s panTro5.chr6 173560118 27 + 175400573 GT-GTATATGTCCTAACATGAGCATACA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171799184 27 + 173848474 GT-GTATATGTCCTAACATGAGCATACA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11481650 27 - 12463322 GT-GTATATGTCCTAACATGAGCATACA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156307468 27 + 157873769 GT-GTGTATGTCCTAACGTGAGCATACA i nomLeu3.chr3 I 2 C 0 s rheMac8.chr4 170336034 27 + 172585720 GT-GTATATGTCCTAATGTGAGCATACA i rheMac8.chr4 I 2 I 1 s macFas5.chr4 169082221 27 - 170955103 GT-GTATATGTCCCAACGTGAGCATACA i macFas5.chr4 I 492 I 1 s macNem1.NW_012011000v1 8367977 27 + 10161646 GT-GTATATGTCCTAATGTGAGCATACA i macNem1.NW_012011000v1 I 2 I 1 s cerAty1.NW_012002071v1 1399088 27 + 3144229 GT-GTGTATGTCCTAATGTGAGCATACA i cerAty1.NW_012002071v1 I 2 I 1 s chlSab2.chr13 96686510 27 + 98384682 AT-GTATATGTCCTAACGTGAGCATACA i chlSab2.chr13 I 2 I 1 s manLeu1.NW_012106474v1 8222678 27 - 10857215 GT-GTGTATGTCCTAATGTGAGCATACA i manLeu1.NW_012106474v1 I 2 I 1 s colAng1.NW_012114488v1 15615287 27 - 23502949 GT-GTATATGTCCTAAAGTAAGCATACA i colAng1.NW_012114488v1 I 2 I 116 s calJac3.chr4 169893750 25 + 171630274 ---ATGCATGTACTAACATGAGCATGTG i calJac3.chr4 C 0 I 1 s saiBol1.JH378287 1299580 28 - 2905041 atgatgtatgtactaatgtgagcatgta i saiBol1.JH378287 C 0 I 640 s aotNan1.NW_018494782v1 1510889 28 - 1813869 ATGATGCATGTACTAACATGAGCATGCA i aotNan1.NW_018494782v1 C 0 I 1 e otoGar3.GL873575 10952962 165 - 12073884 I e cebCap1.NW_016107695v1 1262395 113 - 2164891 I e dasNov3.JH569188 575585 2717 + 760995 I e canFam3.chr1 56173082 6728 + 122678785 I a score=200774.000000 s hg38.chr6_KB021644v2_alt 109049 29 + 185823 GTATACAGGCTAGTCGTCATGTACACACA s panTro5.chr6 173560145 29 + 175400573 GTATACAGGCTAGTCGTCATGTACACACA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171799211 29 + 173848474 GTATACAGGCTAGTCGTCATGTACACACA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11481677 29 - 12463322 GTATACAGGCTAGTCGTCATGTACACACA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156307495 29 + 157873769 GTATACAGGCGAGTCATCATGTACACACG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170336062 29 + 172585720 GTATACGGTCAAGTCGTCACGTACACACA i rheMac8.chr4 I 1 I 966 s macFas5.chr4 169082249 29 - 170955103 GTATACAGGCAAGTCATCATGTACACACG i macFas5.chr4 I 1 I 42 s macNem1.NW_012011000v1 8368005 29 + 10161646 GTATACGGTCAAGTCGTCACGTACACACA i macNem1.NW_012011000v1 I 1 I 409 s cerAty1.NW_012002071v1 1399116 29 + 3144229 GTATACAGTCAAGTCGTCACGTACACACA i cerAty1.NW_012002071v1 I 1 I 937 s chlSab2.chr13 96686538 29 + 98384682 GTATACAGGCAAGTCGTCACATACACACG i chlSab2.chr13 I 1 C 0 s manLeu1.NW_012106474v1 8222706 29 - 10857215 GTATATGGTCAAGTCGTCACGTACACACA i manLeu1.NW_012106474v1 I 1 I 179 s colAng1.NW_012114488v1 15615430 29 - 23502949 GTATACAGACAAGTCATCATGTACACACA i colAng1.NW_012114488v1 I 116 I 2 s calJac3.chr4 169893776 29 + 171630274 GTATTCAGGTGAGTCACTGTGAACACACA i calJac3.chr4 I 1 C 0 s saiBol1.JH378287 1300248 27 - 2905041 gtatgcaggcgagtcactatga--acaca i saiBol1.JH378287 I 640 C 0 s aotNan1.NW_018494782v1 1510918 29 - 1813869 GTATCCAGGTGAGTCACTGTGAACACACA i aotNan1.NW_018494782v1 I 1 C 0 e otoGar3.GL873575 10952962 165 - 12073884 I e cebCap1.NW_016107695v1 1262395 113 - 2164891 I e dasNov3.JH569188 575585 2717 + 760995 I e canFam3.chr1 56173082 6728 + 122678785 I a score=-9073.000000 s hg38.chr6_KB021644v2_alt 109078 1 + 185823 -G s panTro5.chr6 173560174 1 + 175400573 -A i panTro5.chr6 C 0 C 0 s panPan2.chr6 171799240 1 + 173848474 -A i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11481706 1 - 12463322 -A i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156307524 1 + 157873769 -A i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169082320 1 - 170955103 -A i macFas5.chr4 I 42 C 0 s chlSab2.chr13 96686567 1 + 98384682 -A i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15615461 1 - 23502949 -A i colAng1.NW_012114488v1 I 2 C 0 s calJac3.chr4 169893805 1 + 171630274 T- i calJac3.chr4 C 0 I 2 s saiBol1.JH378287 1300275 1 - 2905041 t- i saiBol1.JH378287 C 0 I 2 s aotNan1.NW_018494782v1 1510947 1 - 1813869 T- i aotNan1.NW_018494782v1 C 0 I 2 e otoGar3.GL873575 10952962 165 - 12073884 I e cebCap1.NW_016107695v1 1262395 113 - 2164891 I e dasNov3.JH569188 575585 2717 + 760995 I e canFam3.chr1 56173082 6728 + 122678785 I e cerAty1.NW_012002071v1 1399145 937 + 3144229 I e manLeu1.NW_012106474v1 8222735 179 - 10857215 I e macNem1.NW_012011000v1 8368034 409 + 10161646 I e rheMac8.chr4 170336091 966 + 172585720 I a score=16423.000000 s hg38.chr6_KB021644v2_alt 109079 3 + 185823 TGC s panTro5.chr6 173560175 3 + 175400573 TGC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171799241 3 + 173848474 TGC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11481707 3 - 12463322 CGC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156307525 3 + 157873769 TGC i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169082321 3 - 170955103 TGT i macFas5.chr4 C 0 C 0 s chlSab2.chr13 96686568 3 + 98384682 TGC i chlSab2.chr13 C 0 I 173 s colAng1.NW_012114488v1 15615462 3 - 23502949 TGC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169893808 3 + 171630274 TGC i calJac3.chr4 I 2 C 0 s saiBol1.JH378287 1300278 3 - 2905041 tgc i saiBol1.JH378287 I 2 C 0 s cebCap1.NW_016107695v1 1262508 3 - 2164891 TGC i cebCap1.NW_016107695v1 I 113 C 0 s aotNan1.NW_018494782v1 1510950 3 - 1813869 TGC i aotNan1.NW_018494782v1 I 2 C 0 e otoGar3.GL873575 10952962 165 - 12073884 I e dasNov3.JH569188 575585 2717 + 760995 I e canFam3.chr1 56173082 6728 + 122678785 I e cerAty1.NW_012002071v1 1399145 937 + 3144229 I e manLeu1.NW_012106474v1 8222735 179 - 10857215 I e macNem1.NW_012011000v1 8368034 409 + 10161646 I e rheMac8.chr4 170336091 966 + 172585720 I a score=506475.000000 s hg38.chr6_KB021644v2_alt 109082 57 + 185823 ATGTCCTAACGTGAGCATGTGTGTATATAGGCGAGTTGCTATGTACCCATGTGATGT s panTro5.chr6 173560178 57 + 175400573 ATGTCCTAACCTGAGCATGTGTGTATATAGGCGAGTTGCTATGTACCCATGTGATGT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171799244 57 + 173848474 ATGTCCTAACCTGAGCATGTGTGTATATAGGCGAGTTGCTATGTACCCATGTGATGT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11481710 57 - 12463322 ATGTCCTAACGTGAGCATGTGTGTATATAGGCGAGTTGCTATGTACCCATGTGATGT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156307528 57 + 157873769 ATGTCCTAAGGTGAGCATGTGTGTATACAGGCGAGTTGCTATGTACCCATATGATGT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170337057 57 + 172585720 ATGTACTAATGTGAGCATGTGTGTATACAGGCGAGTTGCTAAGTACCCATATGATGT i rheMac8.chr4 I 966 C 0 s macFas5.chr4 169082324 57 - 170955103 ATGTACTAATGTGAGCATGTGTGTATACAGGCGAGTTGCTAAGTACCCATATGATGT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8368443 57 + 10161646 ATGTACTAATGTGAGCATGTGTGTATAGAGGCGAGTTGCTAAGTACCCATATGATGT i macNem1.NW_012011000v1 I 409 C 0 s cerAty1.NW_012002071v1 1400082 57 + 3144229 ATGTACTAACGTGAGCATGTGTGTATACAGGCGAGTTGCTAAGTACCCATATGATGT i cerAty1.NW_012002071v1 I 937 C 0 s chlSab2.chr13 96686744 57 + 98384682 ATGTACTAACGTGAGCATGCGTGTATACAGGTGAGTTGCTAAGTACCCATATGATGT i chlSab2.chr13 I 173 C 0 s manLeu1.NW_012106474v1 8222914 57 - 10857215 ATGTACTAACGTGAGCATGCGTGTATACAGGCGAGTTGCTAAGTACCCATATGATGT i manLeu1.NW_012106474v1 I 179 C 0 s colAng1.NW_012114488v1 15615465 57 - 23502949 AAGTACTAACATAAGCATGCGTGTATACAGGCGAGTTGCTAAGTACCCATATGATGT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169893811 57 + 171630274 ATGTACTAACGTGAGCATGTGGGTATACAGGTGAGTCACTATGAAcaagcatgatgc i calJac3.chr4 C 0 I 1151 s saiBol1.JH378287 1300281 57 - 2905041 atgtactaatgtgagcatgcctgtatacagacgagtcaatatgaacacacatgatgc i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1262511 57 - 2164891 ATGTACTAACGTGAGCATGTGTGTATACAGGTGAGTCACTATGAACACACATGATGT i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1510953 57 - 1813869 ATGTACTAATGTGAGCATGCGTGTATACGGGCAAGTCACTGTGAACACACATGACGC i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10952962 165 - 12073884 I e dasNov3.JH569188 575585 2717 + 760995 I e canFam3.chr1 56173082 6728 + 122678785 I a score=412628.000000 s hg38.chr6_KB021644v2_alt 109139 41 + 185823 ATGTACTAATACGAGCATGCATGTATACAGGCGAGTCACTA s panTro5.chr6 173560235 41 + 175400573 ATGTACTAATACGAGCATGCATGTATACAGGCGAGTCACTA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171799301 41 + 173848474 ATGTACTAATACGAGCATGCATGTATACAGGCGAGTCACTA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11481767 41 - 12463322 ATGTTCTAATACGAGCATGCATGTATACAGGCGAGTCACTA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156307585 41 + 157873769 ATGTACTAATATGAACATGCATGTATACAGGCGAGTCACTA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170337114 41 + 172585720 GTGTACTAATATGAACATGCATGTATACAGGCGAGTCACTA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169082381 41 - 170955103 GTGTACTAATATGAACATGCATGTATACAGGCGAGTCACTA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8368500 41 + 10161646 GTGTACTAATATGAACATGCATGTATACAGGCGAGTCACTA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1400139 41 + 3144229 ATGTACTAATATGAACATGCATGTATACAGGCGAGTCACTA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96686801 41 + 98384682 ATGTACTAATATGAACATGCATGTATACAGGCGAGTCACTA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8222971 41 - 10857215 ATGTACTAATATGAACATGCATGTATACAGGCGAGTCACTA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15615522 41 - 23502949 ACGTACTAATATGAACATGCATGTATACAGGCGAGTCACTA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169895019 41 + 171630274 ATGTACTAATGTGAGCATGCGTGTATACAGGTGAGTCATTA i calJac3.chr4 I 1151 C 0 s saiBol1.JH378287 1300338 41 - 2905041 atgtactaatgtgagcatgcatgtatacaGGTGAGTCACTA i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1262568 41 - 2164891 ATGTACTAATGTGAGCATACCTGTATACAGGCGAGTCACTA i cebCap1.NW_016107695v1 C 0 I 136 s aotNan1.NW_018494782v1 1511010 41 - 1813869 ATGTACTAACGTGAGCATGCGTGTATACAGGTGACTCACTG i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10952962 165 - 12073884 I e dasNov3.JH569188 575585 2717 + 760995 I e canFam3.chr1 56173082 6728 + 122678785 I a score=323310.000000 s hg38.chr6_KB021644v2_alt 109180 45 + 185823 GGTACACACATGCATACGTATACTAACGTGAGCATGTGTGTATAC s panTro5.chr6 173560276 45 + 175400573 GGTACACACATGCATACGTATACTAACGTAAGCATGTGTGTATAC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171799342 45 + 173848474 GGTACACACATGCATACGTATACTAACGTAAGCATGTGTGTATAC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11481808 45 - 12463322 GGTACACACATGCATACGTATACTAACGTGAGCATGTGTGTATAC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156307626 45 + 157873769 TGTACACACATGCCTACGTATACTAACGTGAGCATGTGTGTATAC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170337155 45 + 172585720 TGTACACACATGCATGCGTGTACTAACAGGCACATGCGTGTACAC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169082422 45 - 170955103 TGTACACACATGCATGCGTGTACTAACATGCACATGCGTGTACAC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8368541 45 + 10161646 TGTACACACATGCATGCGTGTACTAACATGCACATGCGTGTACAC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1400180 45 + 3144229 TGTACACACATGCATGCGTGTACTAACATGCACATGCGTGTATAC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96686842 43 + 98384682 TGTACACACATGCATACATGTACTAACATGCAC--GTGTGTATAC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8223012 45 - 10857215 TGTACACACATGCATGCGTGTACTAACATGCACATGCGTGTATAC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15615563 45 - 23502949 TGTACACACATGCATGTGTGTACTAACATGCACATGTGTGTATAC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169895060 41 + 171630274 TGAACACAC----ATGCATGTACTAATGTGAGCATGTGTGTATAC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1300379 44 - 2905041 TGAACACACATG-ATGTATGTACTAATGTGAGCATGTGTGTATAC i saiBol1.JH378287 C 0 C 0 s aotNan1.NW_018494782v1 1511051 44 - 1813869 TGAACACACATG-ACGCATGTACTAACGTGAGCATGCGTGTATAC i aotNan1.NW_018494782v1 C 0 I 781 e otoGar3.GL873575 10952962 165 - 12073884 I e cebCap1.NW_016107695v1 1262609 136 - 2164891 I e dasNov3.JH569188 575585 2717 + 760995 I e canFam3.chr1 56173082 6728 + 122678785 I a score=247001.000000 s hg38.chr6_KB021644v2_alt 109225 41 + 185823 AGGGACAGTTGCTATGTACACAC-ATGCACATATGTACCTGT s panTro5.chr6 173560321 41 + 175400573 AGGGACAGTTGCTATGTACACAC-ATGCACATATATACCTGT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171799387 41 + 173848474 AGGGACAGTTGCTATGTACACAC-ATGCACATATATACCTGT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11481853 41 - 12463322 AGGGACAGTTGCTATGTACACAC-ATGCACATATGTACCTGT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156307671 41 + 157873769 AGGGACAGTTGCTATGTACACAC-ATGCACATATGTACCTGT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170337200 41 + 172585720 AGGGAGAGTTGCTATGTACACAT-ATGCATATATGTACCTGT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169082467 41 - 170955103 AGGGAGAGTTGCTATGTACACAT-ATGCATATATGTACCTGT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8368586 41 + 10161646 AGGGAGAGTTGCTATGTACACAT-ATGCATATATGTACCTGT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1400225 41 + 3144229 AGGGAGAGTTGCTATGTACACAT-ATGCATGTATGTACCTGT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96686885 41 + 98384682 AGGGAGAGTTGCTATATACACAT-ATGCATATATGTACCTGT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8223057 41 - 10857215 AGGGAGAGTTGCTATGTACACAT-ATGCATGTATGTACCTGT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15615608 41 - 23502949 AGGGAGAGTTGCTATGTACACAT-ATGCATATATGTACCTGT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169895101 37 + 171630274 -AGGCAAGTCACTATGTACACATGATGCACTAACATGA---- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1300423 37 - 2905041 -AGGCGAGTCACTATGCACACATGATGTACTAACATGA---- i saiBol1.JH378287 C 0 C 0 e otoGar3.GL873575 10952962 165 - 12073884 I e aotNan1.NW_018494782v1 1511095 781 - 1813869 I e cebCap1.NW_016107695v1 1262609 136 - 2164891 I e dasNov3.JH569188 575585 2717 + 760995 I e canFam3.chr1 56173082 6728 + 122678785 I a score=1949473.000000 s hg38.chr6_KB021644v2_alt 109266 219 + 185823 GCATAACCAAAGTCTGCAAATAATGGGATATTGTTAATATTTAAAATGATCCTTGAAAACCCTTTAAATTCATTTAAGGCTCAGTGGCTCTTCAATGAGCAGGGGTAGAGGATGGAGGGCCAGCAGCACAGCCATGGTCCCGAGAGTCACTCCTGAACTAGCCAGTG-TGGGGGCCA-GCCCTTCTGCTCATGCAGCCAGTGGTCAGCTACAGGCACAGTC s panTro5.chr6 173560362 219 + 175400573 GCATAACCAAAGTCTGCAAATAATGGGATATTGTTAATATTTAAAATGATCCTTGAAAACCCTTTAAATTCATTTAAGGCTCAGTGGCTCTTCAATGAGCAGGGGTAGAGGATGGAGGGCCAGCAGCACAGCCATGGTCCCAAGAGTCACTCCTGAACAAGCCAGTG-TGGGGGCCA-GCCCTTCTGCGCATGCAGCCAATGGTCAGCTACAGGCACAGTC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171799428 219 + 173848474 GCATAACCAAAGTCTGCAAATAATGGGATATTGTTAATATTTAAAATGATCCTTGAAAACCCTTTAAATTCATTTAAGGCTCAGTGGCTCTTCAATGAGCAGGGGTAGAGGATGGAGGGCCAGCAGCACAGCCATGGTCCCAAGAGTCACTCCTGAACAAGCCAGTG-TGGGGGCCA-GCCCTTCTGCGCATGCAGCCAATGGTCAGCTACAGGCACAGTC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11481894 219 - 12463322 GCATAACCAAAGTCTGCAAATAATGGGATATTGTTAATATTTAAAATGATCCTTGAAAACCCTTTAAATTCATTTAAGGCTCAGTGGCTCTTCAATGAGCAGGGGTAGAGGACGGAGGGCCAGCAGCACAGCCATGGTCCTGAGAGTCACTCCTGAACAAGCCAGTG-TGGGGGCCA-GCCCTTCTGCGCATGCAGCCAATGGTCAGCTACAGGCACAGTC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156307712 220 + 157873769 GCATAACCAAAGTCTGCAAATAATGGGATATTGTTAATATTTAAAATGATCCTTGAAAACCCTTTAAATTCATGTAAGGCTCAGTAGCTCTTCAATGAGCAGGGGTAGACGATGGAGGGCCAGCAGCACAGCCATGGTCCTGAGAATCGCTCCTGAACAAGCCAGTGCTGGGCCCCA-GCCCTTCTGTGCATGCGGCCAATGGTCAGCTACAGGCACAGTC i nomLeu3.chr3 C 0 I 14 s rheMac8.chr4 170337241 217 + 172585720 GCATAACCAAAGTCTGCAAATAATGGGATATTGTAAAT-TTTAAAATGATCCTTGAAAACCCTTTAAATTCATTTAAGGCTCAGTGGCTCTTCAATGAGCAGGGATAGAGGATGGAGGGCCAGCAGCACAGCCATGGTGCC--GAGTCACTCCTGAACAAGCCAGTG-CGGGGGCCCTGCCCTTCTGTGCATACGGCCAATGGTCAACGGCAGGCACAGTC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169082508 217 - 170955103 GCATAACCAAAGTCTGCAAATAATGGGATATTGTAAAT-TTTAAAATGATCCTTGAAAACCCTTTAAATTCATTTAAGGCTCAGTGGCTCTTCAATGAGCAGGGATAGAGGATGGAGGGCCAGCAGCACAGCCATGGTGCC--GAGTCACTCCTGAACAAGCCAGTG-CGGGGGCCCTGCCCTTCTGTGCATACGGCCAATGGTCAACGGCAGGCACAGTC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8368627 218 + 10161646 GCATAACCAAAGTCTGCAAATAATGGGATATTGTTAATATTTAAAATGATCCTTGAAAACCCTTTAAATTCATTTAAGGCTCAGTGGCTCTTCAATGAGCAGGGATAGAGGATGGAGGGCCAACAGCACAGCCATGGTGCC--GAGTCACTCCTGAACAAGCCAGTG-CGGGGGCCCTGCCCTTCTGTGCATACGGCCAATGGTCAACGGCAGGCACAGTC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1400266 220 + 3144229 GCATAACCAAAGTCTGCAAATAATGGGATATTGTTAATATTTAAAATGATCCTTGAAAACCCTTTAAATTCATTTAAGGCTCAGTGGCTCTTCAATGAGCAGGGATAGAGGATGGAGGGCCAGCAGCCTAGCCATGGTGCCAAGAGTCACTCCTGAACAAGCCAGTG-TGGCGACCCTACCCTTCTGTGCATATGGCCAATGGTCAATGGCAGGCACAGTC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96686926 218 + 98384682 GTATAACCAAAGTCTGCAAATAATGGGATATTGTTAATATGTAAAATGATCCCTGAAAATCCTTTAAATTCATTTAAGGCTCAGTGACTCTTCAGTGAGCAGGGGTAGAGGATGGAGGGCCAGCAGCACAGCCATGGTGCC--GAGTCACTCCTGAACAAGCCAGTG-CGGGGGCCCTGCCCTTCTGTGCATACGGCCAATGGACAACGGCAGGCACAGTC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8223098 220 - 10857215 GCATAACCAAAGTCTGCAAATAATGGGATACTGTTAATATTTAAAATGATCCTTGAAAACCCTTTAAATTCATTTAAGGCTCAGTGGCTCTTCAATGAGCAGGGGTAGAGGATGGAGGGCCAACAGCCTAGCCATGGTGCCAAGAATCACTCCTGAACAAGCCAGTG-TGGGGACCCTGCCCTTCTGTGCATATGGCCAATGGTCAATGGCAGGCACAGTC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15615649 218 - 23502949 GCATAACCAAAGTCTGCAAATAATGGGATATTGTTAATATTTAAAATGATCCTTGAAAACTCTCTAAATTAATTTAAGGCTCAGTGGCTCTTCAGTGAGCAAGGGTAGAGGATGGAGGGCCAGCAGCACAGCCATAGTGCC--GAGTCACTCCTGAACAAGCCAGTT-CGGGGGCCCTGCCCTTCTGTGCATACGGCCAATGGTCAACAGCAGGCACAGTC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169895138 214 + 171630274 GCATAACCAACATCTGCAAATAAT-GGATGCTGTTCATATTTAAAATGATCCTTGAACACCATGTAAGTACATTTCCCGCTCAGTGGCTCTTCAGTCAGCAGGGGTGGAGGAGGGGGGGCCAGCAGCACAGCCTCAGTCCCGAGAGTGACTCCTGAACAAGCCAGGG-CAGG--CCCTGCT---CTGCACTTGAGGCCAGTGGTCAACCACAGGCACAGTC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1300460 214 - 2905041 GCATAACCAACGTCTGCAAATAAT-GGATATTGTTAATATTTAAAATGATCCCTGAAAACCCTCTAAGTGCATTTCCGGCTCAGTGGCTCTTCAGTCATCAGGGGTGGAGGATGGAGGGCCAGCAGCACAGCCTCGGTCCCGAGAGTCACTCCTGAACAAGCTGGTG-CGGG--CCCTGCC---CTGCGCTTGAGGCCGGTGGTCAACCACAGGCACAGTC i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1262745 216 - 2164891 GCATAAGCAACGTCTGCAAATAAT-GGATATTGTTAATATTTAAAGTGATCCCAGAAAACCCTTTAAGTGCATTTCCGGCTCAGTGGCTCTTCAGTCATCAGGGGTGGAGGATGGAGGGCCAGCAGCACAACCTCGGT-CCGAGAGTCACTCCTGAACAAGCTGGTG-CGGG--CCCTGCCCTTCTGCGTTTGAGGCCAGTGGTCAACCACAGGCATAGTC i cebCap1.NW_016107695v1 I 136 C 0 s aotNan1.NW_018494782v1 1511876 217 - 1813869 GCATAACTAATGTCTGCAAATAAT-AGATATTGTTAATATTTAAAATGATCCTTGAAAACCCTTTAAGTGCATTTCTGGCTCAGTGGCTCTTCGGTCAGCAGGGGTGGAGGATGGAGGGCCAGCAGCACAGCCTCGGTCCCGAGAGTCACTCCTTAACAAGTCAGTG-CGGG--CCCTGCCCTTCTGTGCTTGAGGCCAGCGGTCAACCACTGGCACAGTC i aotNan1.NW_018494782v1 I 781 C 0 e otoGar3.GL873575 10952962 165 - 12073884 I e dasNov3.JH569188 575585 2717 + 760995 I e canFam3.chr1 56173082 6728 + 122678785 I a score=4664.000000 s hg38.chr6_KB021644v2_alt 109485 1 + 185823 A s panTro5.chr6 173560581 1 + 175400573 A i panTro5.chr6 C 0 C 0 s panPan2.chr6 171799647 1 + 173848474 A i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11482113 1 - 12463322 A i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170337458 1 + 172585720 A i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169082725 1 - 170955103 A i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8368845 1 + 10161646 A i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1400486 1 + 3144229 A i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96687144 1 + 98384682 A i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8223318 1 - 10857215 A i manLeu1.NW_012106474v1 C 0 C 0 s saiBol1.JH378287 1300674 1 - 2905041 A i saiBol1.JH378287 C 0 C 0 s aotNan1.NW_018494782v1 1512093 1 - 1813869 G i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10952962 165 - 12073884 I e cebCap1.NW_016107695v1 1262961 0 - 2164891 C e calJac3.chr4 169895352 0 + 171630274 C e dasNov3.JH569188 575585 2717 + 760995 I e colAng1.NW_012114488v1 15615867 0 - 23502949 C e canFam3.chr1 56173082 6728 + 122678785 I e nomLeu3.chr3 156307932 14 + 157873769 I a score=45195.000000 s hg38.chr6_KB021644v2_alt 109486 11 + 185823 ACAGTGGTGAC s panTro5.chr6 173560582 11 + 175400573 ACAGTGGTGAC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171799648 11 + 173848474 ACAGTGGTGAC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11482114 11 - 12463322 ACAGTGGTGAC i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170337459 11 + 172585720 ACAGTGGTGAC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169082726 11 - 170955103 ACAGTGGTGAC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8368846 11 + 10161646 ACAGTGGTGAC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1400487 11 + 3144229 ACAGTGGTGAC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96687145 11 + 98384682 ACAGTGGTGAC i chlSab2.chr13 C 0 I 2 s manLeu1.NW_012106474v1 8223319 11 - 10857215 ACAGTGGTGAC i manLeu1.NW_012106474v1 C 0 I 2 s saiBol1.JH378287 1300675 4 - 2905041 ACAG------- i saiBol1.JH378287 C 0 C 0 e otoGar3.GL873575 10952962 165 - 12073884 I e aotNan1.NW_018494782v1 1512094 0 - 1813869 C e cebCap1.NW_016107695v1 1262961 0 - 2164891 C e calJac3.chr4 169895352 0 + 171630274 C e dasNov3.JH569188 575585 2717 + 760995 I e colAng1.NW_012114488v1 15615867 0 - 23502949 C e canFam3.chr1 56173082 6728 + 122678785 I e nomLeu3.chr3 156307932 14 + 157873769 I a score=10505.000000 s hg38.chr6_KB021644v2_alt 109497 2 + 185823 AG s panTro5.chr6 173560593 2 + 175400573 AG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171799659 2 + 173848474 AG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11482125 2 - 12463322 AG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156307946 2 + 157873769 AG i nomLeu3.chr3 I 14 C 0 s rheMac8.chr4 170337470 2 + 172585720 AG i rheMac8.chr4 C 0 I 175 s macFas5.chr4 169082737 2 - 170955103 AG i macFas5.chr4 C 0 I 117 s macNem1.NW_012011000v1 8368857 2 + 10161646 AG i macNem1.NW_012011000v1 C 0 I 2 s cerAty1.NW_012002071v1 1400498 2 + 3144229 AG i cerAty1.NW_012002071v1 C 0 I 2 s chlSab2.chr13 96687158 2 + 98384682 AG i chlSab2.chr13 I 2 C 0 s manLeu1.NW_012106474v1 8223332 2 - 10857215 AG i manLeu1.NW_012106474v1 I 2 C 0 e otoGar3.GL873575 10952962 165 - 12073884 I e saiBol1.JH378287 1300679 0 - 2905041 C e aotNan1.NW_018494782v1 1512094 0 - 1813869 C e cebCap1.NW_016107695v1 1262961 0 - 2164891 C e calJac3.chr4 169895352 0 + 171630274 C e dasNov3.JH569188 575585 2717 + 760995 I e colAng1.NW_012114488v1 15615867 0 - 23502949 C e canFam3.chr1 56173082 6728 + 122678785 I a score=84420.000000 s hg38.chr6_KB021644v2_alt 109499 18 + 185823 CATGTTAGGAGGTGCTGG s panTro5.chr6 173560595 18 + 175400573 TGTGTTAGGAGGTGCTGG i panTro5.chr6 C 0 I 4926 s panPan2.chr6 171799661 18 + 173848474 TGTGTTAGGAGGTGCTGG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11482127 18 - 12463322 CGTGTTAGGAGGTGCTGG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156307948 18 + 157873769 CGTGTTAGGAGGTGCTGG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170337647 18 + 172585720 TATGTTAGGAGGTGCTGG i rheMac8.chr4 I 175 C 0 s macFas5.chr4 169082856 18 - 170955103 CGTGTTAGCAGATGCTGG i macFas5.chr4 I 117 C 0 s macNem1.NW_012011000v1 8368861 18 + 10161646 CGTGTTAGAAGGTGCTGG i macNem1.NW_012011000v1 I 2 I 342 s cerAty1.NW_012002071v1 1400502 18 + 3144229 TGTGTTAGGAGGTGCTGG i cerAty1.NW_012002071v1 I 2 C 0 s chlSab2.chr13 96687160 18 + 98384682 CGTGTTAGGAGGTGCTGG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8223334 18 - 10857215 TGTGTTAGGAGGTGCTGG i manLeu1.NW_012106474v1 C 0 C 0 e otoGar3.GL873575 10952962 165 - 12073884 I e saiBol1.JH378287 1300679 0 - 2905041 C e aotNan1.NW_018494782v1 1512094 0 - 1813869 C e cebCap1.NW_016107695v1 1262961 0 - 2164891 C e calJac3.chr4 169895352 0 + 171630274 C e dasNov3.JH569188 575585 2717 + 760995 I e colAng1.NW_012114488v1 15615867 0 - 23502949 C e canFam3.chr1 56173082 6728 + 122678785 I a score=12378.000000 s hg38.chr6_KB021644v2_alt 109517 7 + 185823 CGTGTAT s panPan2.chr6 171799679 7 + 173848474 GGTGGAC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11482145 7 - 12463322 GGTGTAT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156307966 7 + 157873769 GGTGGGC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170337665 7 + 172585720 GGTGTAT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169082874 7 - 170955103 GGTGGGC i macFas5.chr4 C 0 C 0 s cerAty1.NW_012002071v1 1400520 7 + 3144229 GGTGTAG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96687178 7 + 98384682 GGTGTAT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8223352 7 - 10857215 GGTGTAG i manLeu1.NW_012106474v1 C 0 C 0 e otoGar3.GL873575 10952962 165 - 12073884 I e saiBol1.JH378287 1300679 0 - 2905041 C e aotNan1.NW_018494782v1 1512094 0 - 1813869 C e cebCap1.NW_016107695v1 1262961 0 - 2164891 C e calJac3.chr4 169895352 0 + 171630274 C e dasNov3.JH569188 575585 2717 + 760995 I e colAng1.NW_012114488v1 15615867 0 - 23502949 C e canFam3.chr1 56173082 6728 + 122678785 I e macNem1.NW_012011000v1 8368879 342 + 10161646 I e panTro5.chr6 173560613 4926 + 175400573 I a score=231.000000 s hg38.chr6_KB021644v2_alt 109524 2 + 185823 CA s panPan2.chr6 171799686 2 + 173848474 CA i panPan2.chr6 C 0 I 57 s gorGor5.CYUI01015032v1 11482152 2 - 12463322 CA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156307973 2 + 157873769 CG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170337672 1 + 172585720 -C i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169082881 2 - 170955103 CA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8369221 2 + 10161646 CA i macNem1.NW_012011000v1 I 342 C 0 s cerAty1.NW_012002071v1 1400527 2 + 3144229 CA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96687185 1 + 98384682 C- i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8223359 2 - 10857215 CA i manLeu1.NW_012106474v1 C 0 C 0 e otoGar3.GL873575 10952962 165 - 12073884 I e saiBol1.JH378287 1300679 0 - 2905041 C e aotNan1.NW_018494782v1 1512094 0 - 1813869 C e cebCap1.NW_016107695v1 1262961 0 - 2164891 C e calJac3.chr4 169895352 0 + 171630274 C e dasNov3.JH569188 575585 2717 + 760995 I e colAng1.NW_012114488v1 15615867 0 - 23502949 C e canFam3.chr1 56173082 6728 + 122678785 I e panTro5.chr6 173560613 4926 + 175400573 I a score=36779.000000 s hg38.chr6_KB021644v2_alt 109526 11 + 185823 GGGGCA-GCTCT s panPan2.chr6 171799745 11 + 173848474 GGGGCA-GCTCT i panPan2.chr6 I 57 C 0 s gorGor5.CYUI01015032v1 11482154 11 - 12463322 GGGGCA-GCTCT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156307975 11 + 157873769 -GGGCAGGCTCT i nomLeu3.chr3 C 0 T 57 s rheMac8.chr4 170337673 12 + 172585720 AGGGCAGGCTCT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169082883 12 - 170955103 GGGGCAGGTTCT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8369223 12 + 10161646 GGGGCAGGCTCT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1400529 12 + 3144229 GGGGCAGGCTCT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96687186 12 + 98384682 GGAGCAGGCTCT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8223361 12 - 10857215 GGGGCAGGCTCT i manLeu1.NW_012106474v1 C 0 C 0 e otoGar3.GL873575 10952962 165 - 12073884 I e saiBol1.JH378287 1300679 0 - 2905041 C e aotNan1.NW_018494782v1 1512094 0 - 1813869 C e cebCap1.NW_016107695v1 1262961 0 - 2164891 C e calJac3.chr4 169895352 0 + 171630274 C e dasNov3.JH569188 575585 2717 + 760995 I e colAng1.NW_012114488v1 15615867 0 - 23502949 C e canFam3.chr1 56173082 6728 + 122678785 I e panTro5.chr6 173560613 4926 + 175400573 I a score=73929.000000 s hg38.chr6_KB021644v2_alt 109537 21 + 185823 GTGAACAATGGTGATGGAGCA s panPan2.chr6 171799756 21 + 173848474 GTGAACAGTGGTGACGGAGCG i panPan2.chr6 C 0 T 114 s gorGor5.CYUI01015032v1 11482165 21 - 12463322 GTGAACAGTGGTGATGGAGCG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156307929 21 + 157873769 GTCAACAGTGGTGACAGAGCG i nomLeu3.chr3 T 57 C 0 s rheMac8.chr4 170337685 21 + 172585720 GTGAACTGTGGGGACAGAGTG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169082895 21 - 170955103 GTGAACAGTGGTGACAGAGTA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8369235 21 + 10161646 GTGAACAGTAGTGACAGAGCA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1400541 21 + 3144229 GTGAACAGTAGTGACAGAGCG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96687198 21 + 98384682 GTGAACAGTGGTGACAGAGCG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8223373 21 - 10857215 GTGAACAGTGGGGACAGAACG i manLeu1.NW_012106474v1 C 0 C 0 s saiBol1.JH378287 1300679 13 - 2905041 --------TGGTGATGGAGGA i saiBol1.JH378287 C 0 C 0 e otoGar3.GL873575 10952962 165 - 12073884 I e aotNan1.NW_018494782v1 1512094 0 - 1813869 C e cebCap1.NW_016107695v1 1262961 0 - 2164891 C e calJac3.chr4 169895352 0 + 171630274 C e dasNov3.JH569188 575585 2717 + 760995 I e colAng1.NW_012114488v1 15615867 0 - 23502949 C e canFam3.chr1 56173082 6728 + 122678785 I e panTro5.chr6 173560613 4926 + 175400573 I a score=71863.000000 s hg38.chr6_KB021644v2_alt 109558 16 + 185823 TGTTAGGAGGTGCT-GG s panPan2.chr6 171799663 16 + 173848474 TGTTAGGAGGTGCT-GG i panPan2.chr6 T 114 C 0 s gorGor5.CYUI01015032v1 11482186 16 - 12463322 TGTTAGGAGGTGCT-GG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156307950 16 + 157873769 TGTTAGGAGGTGCT-GG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170337706 16 + 172585720 TGTTAGGAGATGCT-GG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169082916 16 - 170955103 TGTTAGGAGGTGCT-GG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8369256 17 + 10161646 TATTAGGAGATGCTGGG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1400562 17 + 3144229 TGTTAGGAGATGCTGGG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96687219 16 + 98384682 TGTTAGGAGGTGCT-GG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8223394 16 - 10857215 TGTTAGGAGATGCT-GG i manLeu1.NW_012106474v1 C 0 I 17 s saiBol1.JH378287 1300692 16 - 2905041 TGTTAGGAGGTGCT-GG i saiBol1.JH378287 C 0 C 0 e otoGar3.GL873575 10952962 165 - 12073884 I e aotNan1.NW_018494782v1 1512094 0 - 1813869 C e cebCap1.NW_016107695v1 1262961 0 - 2164891 C e calJac3.chr4 169895352 0 + 171630274 C e dasNov3.JH569188 575585 2717 + 760995 I e colAng1.NW_012114488v1 15615867 0 - 23502949 C e canFam3.chr1 56173082 6728 + 122678785 I e panTro5.chr6 173560613 4926 + 175400573 I a score=7375.000000 s hg38.chr6_KB021644v2_alt 109574 9 + 185823 GGTGGACC-A s panPan2.chr6 171799679 9 + 173848474 GGTGGACC-A i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11482202 9 - 12463322 GGTGTATC-A i gorGor5.CYUI01015032v1 C 0 T 98 s nomLeu3.chr3 156307966 9 + 157873769 GGTGGGCC-G i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170337722 9 + 172585720 GGCGGGCCA- i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169082932 8 - 170955103 GGTGTATC-- i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8369273 8 + 10161646 GGTGTATT-- i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1400579 8 + 3144229 GGTGTATC-- i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96687235 8 + 98384682 GGTGTATC-- i chlSab2.chr13 C 0 C 0 s saiBol1.JH378287 1300708 9 - 2905041 GGTGGGCC-A i saiBol1.JH378287 C 0 T 48 e otoGar3.GL873575 10952962 165 - 12073884 I e aotNan1.NW_018494782v1 1512094 0 - 1813869 C e cebCap1.NW_016107695v1 1262961 0 - 2164891 C e calJac3.chr4 169895352 0 + 171630274 C e dasNov3.JH569188 575585 2717 + 760995 I e colAng1.NW_012114488v1 15615867 0 - 23502949 C e canFam3.chr1 56173082 6728 + 122678785 I e manLeu1.NW_012106474v1 8223410 17 - 10857215 I e panTro5.chr6 173560613 4926 + 175400573 I a score=1883.000000 s hg38.chr6_KB021644v2_alt 109583 1 + 185823 G s panPan2.chr6 171799688 1 + 173848474 G i panPan2.chr6 C 0 I 56 s nomLeu3.chr3 156307975 1 + 157873769 G i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170337731 1 + 172585720 G i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169082940 1 - 170955103 A i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8369281 1 + 10161646 G i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1400587 1 + 3144229 G i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96687243 1 + 98384682 G i chlSab2.chr13 C 0 C 0 e otoGar3.GL873575 10952962 165 - 12073884 I e saiBol1.JH378287 1300717 48 - 2905041 T e aotNan1.NW_018494782v1 1512094 0 - 1813869 C e cebCap1.NW_016107695v1 1262961 0 - 2164891 C e calJac3.chr4 169895352 0 + 171630274 C e dasNov3.JH569188 575585 2717 + 760995 I e colAng1.NW_012114488v1 15615867 0 - 23502949 C e canFam3.chr1 56173082 6728 + 122678785 I e manLeu1.NW_012106474v1 8223410 17 - 10857215 I e gorGor5.CYUI01015032v1 11482211 98 - 12463322 T e panTro5.chr6 173560613 4926 + 175400573 I a score=6945.000000 s hg38.chr6_KB021644v2_alt 109584 5 + 185823 GGGCA s nomLeu3.chr3 156307976 5 + 157873769 GGCAG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170337732 5 + 172585720 GGGCA i rheMac8.chr4 C 0 I 1 s macFas5.chr4 169082941 5 - 170955103 GGGCA i macFas5.chr4 C 0 I 1 s macNem1.NW_012011000v1 8369282 5 + 10161646 GGGCA i macNem1.NW_012011000v1 C 0 I 1 s cerAty1.NW_012002071v1 1400588 5 + 3144229 GGGCA i cerAty1.NW_012002071v1 C 0 I 1 s chlSab2.chr13 96687244 5 + 98384682 GGGCA i chlSab2.chr13 C 0 I 1 e otoGar3.GL873575 10952962 165 - 12073884 I e saiBol1.JH378287 1300717 48 - 2905041 T e aotNan1.NW_018494782v1 1512094 0 - 1813869 C e cebCap1.NW_016107695v1 1262961 0 - 2164891 C e calJac3.chr4 169895352 0 + 171630274 C e dasNov3.JH569188 575585 2717 + 760995 I e colAng1.NW_012114488v1 15615867 0 - 23502949 C e canFam3.chr1 56173082 6728 + 122678785 I e manLeu1.NW_012106474v1 8223410 17 - 10857215 I e gorGor5.CYUI01015032v1 11482211 98 - 12463322 T e panPan2.chr6 171799689 56 + 173848474 I e panTro5.chr6 173560613 4926 + 175400573 I a score=8148.000000 s hg38.chr6_KB021644v2_alt 109589 3 + 185823 GCT s nomLeu3.chr3 156307981 3 + 157873769 GCT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170337738 3 + 172585720 GCT i rheMac8.chr4 I 1 C 0 s macFas5.chr4 169082947 3 - 170955103 GCT i macFas5.chr4 I 1 C 0 s macNem1.NW_012011000v1 8369288 3 + 10161646 GCT i macNem1.NW_012011000v1 I 1 C 0 s cerAty1.NW_012002071v1 1400594 3 + 3144229 GCT i cerAty1.NW_012002071v1 I 1 C 0 s chlSab2.chr13 96687250 3 + 98384682 GCT i chlSab2.chr13 I 1 C 0 s manLeu1.NW_012106474v1 8223427 3 - 10857215 GCT i manLeu1.NW_012106474v1 I 17 C 0 e otoGar3.GL873575 10952962 165 - 12073884 I e saiBol1.JH378287 1300717 48 - 2905041 T e aotNan1.NW_018494782v1 1512094 0 - 1813869 C e cebCap1.NW_016107695v1 1262961 0 - 2164891 C e calJac3.chr4 169895352 0 + 171630274 C e dasNov3.JH569188 575585 2717 + 760995 I e colAng1.NW_012114488v1 15615867 0 - 23502949 C e canFam3.chr1 56173082 6728 + 122678785 I e gorGor5.CYUI01015032v1 11482211 98 - 12463322 T e panPan2.chr6 171799689 56 + 173848474 I e panTro5.chr6 173560613 4926 + 175400573 I a score=13840.000000 s hg38.chr6_KB021644v2_alt 109592 5 + 185823 CTGTG s nomLeu3.chr3 156307984 5 + 157873769 CTGTG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170337741 5 + 172585720 CTGTG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169082950 5 - 170955103 CTGTG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8369291 5 + 10161646 CTGTG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1400597 5 + 3144229 CTGTG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96687253 5 + 98384682 CTGTG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8223430 5 - 10857215 CTGTG i manLeu1.NW_012106474v1 C 0 C 0 s saiBol1.JH378287 1300669 5 - 2905041 CAGTC i saiBol1.JH378287 T 48 C 0 e otoGar3.GL873575 10952962 165 - 12073884 I e aotNan1.NW_018494782v1 1512094 0 - 1813869 C e cebCap1.NW_016107695v1 1262961 0 - 2164891 C e calJac3.chr4 169895352 0 + 171630274 C e dasNov3.JH569188 575585 2717 + 760995 I e colAng1.NW_012114488v1 15615867 0 - 23502949 C e canFam3.chr1 56173082 6728 + 122678785 I e gorGor5.CYUI01015032v1 11482211 98 - 12463322 T e panPan2.chr6 171799689 56 + 173848474 I e panTro5.chr6 173560613 4926 + 175400573 I a score=41534.000000 s hg38.chr6_KB021644v2_alt 109597 12 + 185823 AACAGTGGTGAC s gorGor5.CYUI01015032v1 11482113 12 - 12463322 AACAGTGGTGAC i gorGor5.CYUI01015032v1 T 98 I 169 s nomLeu3.chr3 156307989 12 + 157873769 AACGGTGGTGAC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170337746 12 + 172585720 AACAGTGGGGAC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169082955 12 - 170955103 AACTGTGGGGAC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8369296 12 + 10161646 AACAGTGGGGAC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1400602 12 + 3144229 AACAGTGGGGAC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96687258 12 + 98384682 AACAGTGGTGAC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8223435 12 - 10857215 GACAGTGGTGAC i manLeu1.NW_012106474v1 C 0 C 0 s saiBol1.JH378287 1300674 12 - 2905041 AACAGTGGTGAT i saiBol1.JH378287 C 0 C 0 e otoGar3.GL873575 10952962 165 - 12073884 I e aotNan1.NW_018494782v1 1512094 0 - 1813869 C e cebCap1.NW_016107695v1 1262961 0 - 2164891 C e calJac3.chr4 169895352 0 + 171630274 C e dasNov3.JH569188 575585 2717 + 760995 I e colAng1.NW_012114488v1 15615867 0 - 23502949 C e canFam3.chr1 56173082 6728 + 122678785 I e panPan2.chr6 171799689 56 + 173848474 I e panTro5.chr6 173560613 4926 + 175400573 I a score=84571.000000 s hg38.chr6_KB021644v2_alt 109609 24 + 185823 GGAGTGTGTTAGGAGGTGCTGGGG s gorGor5.CYUI01015032v1 11482294 24 - 12463322 GGAGCGTGTTAGGAGGTGCTGGGG i gorGor5.CYUI01015032v1 I 169 C 0 s nomLeu3.chr3 156308001 24 + 157873769 ACAGCATGTTAGGAGGTGCTGGGG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170337758 24 + 172585720 AGAGCATATTAGGAGATGCTGGGG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169082967 24 - 170955103 AGAGTGTGTTAGGAGATGCTGGGG i macFas5.chr4 C 0 I 1 s macNem1.NW_012011000v1 8369308 24 + 10161646 AGAGTGTGTTAGTAGATGCTGGGG i macNem1.NW_012011000v1 C 0 T 57 s cerAty1.NW_012002071v1 1400614 24 + 3144229 AGAGCATGTTAGGAGATGCTGGGG i cerAty1.NW_012002071v1 C 0 I 1 s chlSab2.chr13 96687270 24 + 98384682 AGAGCGTGTTAGGAGGTGCTGGGG i chlSab2.chr13 C 0 I 1 s manLeu1.NW_012106474v1 8223447 24 - 10857215 AGAGCGTGTTAGGAGATGCTGGAG i manLeu1.NW_012106474v1 C 0 I 1 s saiBol1.JH378287 1300686 24 - 2905041 GGAGGATGTTAGGAGGTGCTGGGG i saiBol1.JH378287 C 0 C 0 e otoGar3.GL873575 10952962 165 - 12073884 I e aotNan1.NW_018494782v1 1512094 0 - 1813869 C e cebCap1.NW_016107695v1 1262961 0 - 2164891 C e calJac3.chr4 169895352 0 + 171630274 C e dasNov3.JH569188 575585 2717 + 760995 I e colAng1.NW_012114488v1 15615867 0 - 23502949 C e canFam3.chr1 56173082 6728 + 122678785 I e panPan2.chr6 171799689 56 + 173848474 I e panTro5.chr6 173560613 4926 + 175400573 I a score=4439.000000 s hg38.chr6_KB021644v2_alt 109633 6 + 185823 TGGGCC s gorGor5.CYUI01015032v1 11482318 6 - 12463322 TGGCCC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156308025 6 + 157873769 TGGGCC i nomLeu3.chr3 C 0 I 1 s rheMac8.chr4 170337782 6 + 172585720 TGTATT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169082992 6 - 170955103 GGGCCA i macFas5.chr4 I 1 C 0 s macNem1.NW_012011000v1 8369275 6 + 10161646 TGTATT i macNem1.NW_012011000v1 T 57 C 0 s cerAty1.NW_012002071v1 1400639 6 + 3144229 TGTATC i cerAty1.NW_012002071v1 I 1 C 0 s chlSab2.chr13 96687295 5 + 98384682 -GTATC i chlSab2.chr13 I 1 C 0 s manLeu1.NW_012106474v1 8223472 6 - 10857215 TGTAGC i manLeu1.NW_012106474v1 I 1 I 1 s saiBol1.JH378287 1300710 6 - 2905041 TGGGCC i saiBol1.JH378287 C 0 C 0 e otoGar3.GL873575 10952962 165 - 12073884 I e aotNan1.NW_018494782v1 1512094 0 - 1813869 C e cebCap1.NW_016107695v1 1262961 0 - 2164891 C e calJac3.chr4 169895352 0 + 171630274 C e dasNov3.JH569188 575585 2717 + 760995 I e colAng1.NW_012114488v1 15615867 0 - 23502949 C e canFam3.chr1 56173082 6728 + 122678785 I e panPan2.chr6 171799689 56 + 173848474 I e panTro5.chr6 173560613 4926 + 175400573 I a score=18323.000000 s hg38.chr6_KB021644v2_alt 109639 4 + 185823 GGGG s panPan2.chr6 171799745 4 + 173848474 GGGG i panPan2.chr6 I 56 C 0 s gorGor5.CYUI01015032v1 11482324 4 - 12463322 AGGG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156308032 4 + 157873769 GGAG i nomLeu3.chr3 I 1 C 0 s rheMac8.chr4 170337788 4 + 172585720 GGGG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169082998 4 - 170955103 GGGG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8369281 4 + 10161646 GGGG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1400645 4 + 3144229 GGGG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96687300 4 + 98384682 GGGG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8223479 4 - 10857215 GGGG i manLeu1.NW_012106474v1 I 1 C 0 s saiBol1.JH378287 1300716 4 - 2905041 AGGG i saiBol1.JH378287 C 0 T 49 e otoGar3.GL873575 10952962 165 - 12073884 I e aotNan1.NW_018494782v1 1512094 0 - 1813869 C e cebCap1.NW_016107695v1 1262961 0 - 2164891 C e calJac3.chr4 169895352 0 + 171630274 C e dasNov3.JH569188 575585 2717 + 760995 I e colAng1.NW_012114488v1 15615867 0 - 23502949 C e canFam3.chr1 56173082 6728 + 122678785 I e panTro5.chr6 173560613 4926 + 175400573 I a score=4275.000000 s hg38.chr6_KB021644v2_alt 109643 3 + 185823 CAG- s panPan2.chr6 171799749 3 + 173848474 CAG- i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11482328 3 - 12463322 CAG- i gorGor5.CYUI01015032v1 C 0 T 206 s nomLeu3.chr3 156308036 3 + 157873769 CAG- i nomLeu3.chr3 C 0 I 1 s rheMac8.chr4 170337792 4 + 172585720 CAGG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169083002 4 - 170955103 CAGG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8369285 4 + 10161646 CAGG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1400649 4 + 3144229 CAGG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96687304 4 + 98384682 CAGG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8223483 4 - 10857215 CAGG i manLeu1.NW_012106474v1 C 0 C 0 e otoGar3.GL873575 10952962 165 - 12073884 I e saiBol1.JH378287 1300720 49 - 2905041 T e aotNan1.NW_018494782v1 1512094 0 - 1813869 C e cebCap1.NW_016107695v1 1262961 0 - 2164891 C e calJac3.chr4 169895352 0 + 171630274 C e dasNov3.JH569188 575585 2717 + 760995 I e colAng1.NW_012114488v1 15615867 0 - 23502949 C e canFam3.chr1 56173082 6728 + 122678785 I e panTro5.chr6 173560613 4926 + 175400573 I a score=24228.000000 s hg38.chr6_KB021644v2_alt 109646 7 + 185823 CTCTGTG s panPan2.chr6 171799752 7 + 173848474 CTCTGTG i panPan2.chr6 C 0 C 0 s nomLeu3.chr3 156308040 7 + 157873769 CTCTGTG i nomLeu3.chr3 I 1 T 58 s rheMac8.chr4 170337796 7 + 172585720 CTCTGTG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169083006 7 - 170955103 CTCTGTG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8369289 7 + 10161646 CTCTGTG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1400653 7 + 3144229 CTCTGTG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96687308 7 + 98384682 CTCTGTG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8223487 7 - 10857215 CTCTGTG i manLeu1.NW_012106474v1 C 0 C 0 e otoGar3.GL873575 10952962 165 - 12073884 I e saiBol1.JH378287 1300720 49 - 2905041 T e aotNan1.NW_018494782v1 1512094 0 - 1813869 C e cebCap1.NW_016107695v1 1262961 0 - 2164891 C e calJac3.chr4 169895352 0 + 171630274 C e dasNov3.JH569188 575585 2717 + 760995 I e colAng1.NW_012114488v1 15615867 0 - 23502949 C e canFam3.chr1 56173082 6728 + 122678785 I e gorGor5.CYUI01015032v1 11482331 206 - 12463322 T e panTro5.chr6 173560613 4926 + 175400573 I a score=34521.000000 s hg38.chr6_KB021644v2_alt 109653 12 + 185823 AACAATGGTGAT s panPan2.chr6 171799759 12 + 173848474 AACAGTGGTGAC i panPan2.chr6 C 0 C 0 s nomLeu3.chr3 156307989 12 + 157873769 AACGGTGGTGAC i nomLeu3.chr3 T 58 C 0 s rheMac8.chr4 170337803 12 + 172585720 AACAGTGGTGAC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169083013 12 - 170955103 AACAGTGGGGAC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8369296 12 + 10161646 AACAGTGGGGAC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1400660 12 + 3144229 AACAGTGGTGAC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96687315 12 + 98384682 AACAGTGGGGAC i chlSab2.chr13 C 0 T 171 s manLeu1.NW_012106474v1 8223494 12 - 10857215 AACAGTGGTGAC i manLeu1.NW_012106474v1 C 0 C 0 e otoGar3.GL873575 10952962 165 - 12073884 I e saiBol1.JH378287 1300720 49 - 2905041 T e aotNan1.NW_018494782v1 1512094 0 - 1813869 C e cebCap1.NW_016107695v1 1262961 0 - 2164891 C e calJac3.chr4 169895352 0 + 171630274 C e dasNov3.JH569188 575585 2717 + 760995 I e colAng1.NW_012114488v1 15615867 0 - 23502949 C e canFam3.chr1 56173082 6728 + 122678785 I e gorGor5.CYUI01015032v1 11482331 206 - 12463322 T e panTro5.chr6 173560613 4926 + 175400573 I a score=3377.000000 s hg38.chr6_KB021644v2_alt 109665 2 + 185823 GG s panPan2.chr6 171799771 2 + 173848474 GG i panPan2.chr6 C 0 C 0 s nomLeu3.chr3 156308001 2 + 157873769 AC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170337815 2 + 172585720 AG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169083025 2 - 170955103 AG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8369308 2 + 10161646 AG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1400672 2 + 3144229 AG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96687156 2 + 98384682 AG i chlSab2.chr13 T 171 C 0 s manLeu1.NW_012106474v1 8223506 2 - 10857215 AG i manLeu1.NW_012106474v1 C 0 C 0 e otoGar3.GL873575 10952962 165 - 12073884 I e saiBol1.JH378287 1300720 49 - 2905041 T e aotNan1.NW_018494782v1 1512094 0 - 1813869 C e cebCap1.NW_016107695v1 1262961 0 - 2164891 C e calJac3.chr4 169895352 0 + 171630274 C e dasNov3.JH569188 575585 2717 + 760995 I e colAng1.NW_012114488v1 15615867 0 - 23502949 C e canFam3.chr1 56173082 6728 + 122678785 I e gorGor5.CYUI01015032v1 11482331 206 - 12463322 T e panTro5.chr6 173560613 4926 + 175400573 I a score=54360.000000 s hg38.chr6_KB021644v2_alt 109667 20 + 185823 AG---------------------------------------------------------CGTGTTAGGAGGTGCTGG s panPan2.chr6 171799773 20 + 173848474 AG---------------------------------------------------------CGTGTTAGGAGGTGCTGG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11482125 20 - 12463322 AG---------------------------------------------------------CGTGTTAGGAGGTGCTGG i gorGor5.CYUI01015032v1 T 206 C 0 s nomLeu3.chr3 156308003 20 + 157873769 AG---------------------------------------------------------CATGTTAGGAGGTGCTGG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170337817 20 + 172585720 AT---------------------------------------------------------CATGTTAGGAGATGCTGG i rheMac8.chr4 C 0 I 1 s macFas5.chr4 169083027 77 - 170955103 AGCATATTAGGAGATGCTGGGGTGTATTGGGGCAGGCTCTGTGAACAGTGGTGACAGATCATGTTAGGAGATGCTGG i macFas5.chr4 C 0 I 1 s macNem1.NW_012011000v1 8369310 20 + 10161646 AG---------------------------------------------------------TGTGTTAGTAGATGCTGG i macNem1.NW_012011000v1 C 0 I 1 s cerAty1.NW_012002071v1 1400674 20 + 3144229 AA---------------------------------------------------------CGTGTTAGGAGATGCTGG i cerAty1.NW_012002071v1 C 0 I 17 s chlSab2.chr13 96687158 20 + 98384682 AG---------------------------------------------------------CGTGTTAGGAGGTGCTGG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8223508 20 - 10857215 AG---------------------------------------------------------CGTATTAGGAGATGCTGG i manLeu1.NW_012106474v1 C 0 M 639 e otoGar3.GL873575 10952962 165 - 12073884 I e saiBol1.JH378287 1300720 49 - 2905041 T e aotNan1.NW_018494782v1 1512094 0 - 1813869 C e cebCap1.NW_016107695v1 1262961 0 - 2164891 C e calJac3.chr4 169895352 0 + 171630274 C e dasNov3.JH569188 575585 2717 + 760995 I e colAng1.NW_012114488v1 15615867 0 - 23502949 C e canFam3.chr1 56173082 6728 + 122678785 I e panTro5.chr6 173560613 4926 + 175400573 I a score=10948.000000 s hg38.chr6_KB021644v2_alt 109687 4 + 185823 GGTG s panPan2.chr6 171799793 4 + 173848474 GGTG i panPan2.chr6 C 0 T 108 s gorGor5.CYUI01015032v1 11482145 4 - 12463322 GGTG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156308023 4 + 157873769 GGTG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170337838 4 + 172585720 GGTG i rheMac8.chr4 I 1 C 0 s macFas5.chr4 169083105 4 - 170955103 GGTG i macFas5.chr4 I 1 C 0 s macNem1.NW_012011000v1 8369331 4 + 10161646 GGTG i macNem1.NW_012011000v1 I 1 C 0 s chlSab2.chr13 96687178 4 + 98384682 GGTG i chlSab2.chr13 C 0 C 0 e otoGar3.GL873575 10952962 165 - 12073884 I e saiBol1.JH378287 1300720 49 - 2905041 T e aotNan1.NW_018494782v1 1512094 0 - 1813869 C e cebCap1.NW_016107695v1 1262961 0 - 2164891 C e calJac3.chr4 169895352 0 + 171630274 C e dasNov3.JH569188 575585 2717 + 760995 I e colAng1.NW_012114488v1 15615867 0 - 23502949 C e canFam3.chr1 56173082 6728 + 122678785 I e cerAty1.NW_012002071v1 1400694 17 + 3144229 I e manLeu1.NW_012106474v1 8223528 639 - 10857215 M e panTro5.chr6 173560613 4926 + 175400573 I a score=3320.000000 s hg38.chr6_KB021644v2_alt 109691 4 + 185823 TATC s gorGor5.CYUI01015032v1 11482149 4 - 12463322 TATC i gorGor5.CYUI01015032v1 C 0 I 2 s nomLeu3.chr3 156308027 4 + 157873769 GGCC i nomLeu3.chr3 C 0 I 2 s rheMac8.chr4 170337842 4 + 172585720 TAGC i rheMac8.chr4 C 0 I 2 s macFas5.chr4 169083109 4 - 170955103 TAGC i macFas5.chr4 C 0 I 2 s macNem1.NW_012011000v1 8369335 4 + 10161646 TATC i macNem1.NW_012011000v1 C 0 I 1 s chlSab2.chr13 96687182 4 + 98384682 TATC i chlSab2.chr13 C 0 I 1 e otoGar3.GL873575 10952962 165 - 12073884 I e saiBol1.JH378287 1300720 49 - 2905041 T e aotNan1.NW_018494782v1 1512094 0 - 1813869 C e cebCap1.NW_016107695v1 1262961 0 - 2164891 C e calJac3.chr4 169895352 0 + 171630274 C e dasNov3.JH569188 575585 2717 + 760995 I e colAng1.NW_012114488v1 15615867 0 - 23502949 C e canFam3.chr1 56173082 6728 + 122678785 I e cerAty1.NW_012002071v1 1400694 17 + 3144229 I e manLeu1.NW_012106474v1 8223528 639 - 10857215 M e panPan2.chr6 171799797 108 + 173848474 T e panTro5.chr6 173560613 4926 + 175400573 I a score=12167.000000 s hg38.chr6_KB021644v2_alt 109695 5 + 185823 GGGCA s panPan2.chr6 171799689 5 + 173848474 GGGCA i panPan2.chr6 T 108 C 0 s gorGor5.CYUI01015032v1 11482155 5 - 12463322 GGGCA i gorGor5.CYUI01015032v1 I 2 C 0 s nomLeu3.chr3 156308033 5 + 157873769 GAGCA i nomLeu3.chr3 I 2 I 1 s rheMac8.chr4 170337848 5 + 172585720 GGGCA i rheMac8.chr4 I 2 I 1 s macFas5.chr4 169083115 5 - 170955103 GGGCA i macFas5.chr4 I 2 I 1 s macNem1.NW_012011000v1 8369340 5 + 10161646 GGGCA i macNem1.NW_012011000v1 I 1 I 1 s chlSab2.chr13 96687187 5 + 98384682 GAGCA i chlSab2.chr13 I 1 I 1 e otoGar3.GL873575 10952962 165 - 12073884 I e saiBol1.JH378287 1300720 49 - 2905041 T e aotNan1.NW_018494782v1 1512094 0 - 1813869 C e cebCap1.NW_016107695v1 1262961 0 - 2164891 C e calJac3.chr4 169895352 0 + 171630274 C e dasNov3.JH569188 575585 2717 + 760995 I e colAng1.NW_012114488v1 15615867 0 - 23502949 C e canFam3.chr1 56173082 6728 + 122678785 I e cerAty1.NW_012002071v1 1400694 17 + 3144229 I e manLeu1.NW_012106474v1 8223528 639 - 10857215 M e panTro5.chr6 173560613 4926 + 175400573 I a score=17352.000000 s hg38.chr6_KB021644v2_alt 109700 5 + 185823 GCTCT s panPan2.chr6 171799694 5 + 173848474 GCTCT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11482160 5 - 12463322 GCTCT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156308039 5 + 157873769 GCTCT i nomLeu3.chr3 I 1 C 0 s rheMac8.chr4 170337854 5 + 172585720 GCTCT i rheMac8.chr4 I 1 C 0 s macFas5.chr4 169083121 5 - 170955103 GCTCT i macFas5.chr4 I 1 C 0 s macNem1.NW_012011000v1 8369346 5 + 10161646 GCTCT i macNem1.NW_012011000v1 I 1 C 0 s cerAty1.NW_012002071v1 1400711 5 + 3144229 GCTCT i cerAty1.NW_012002071v1 I 17 C 0 s chlSab2.chr13 96687193 5 + 98384682 GCTCT i chlSab2.chr13 I 1 C 0 e otoGar3.GL873575 10952962 165 - 12073884 I e saiBol1.JH378287 1300720 49 - 2905041 T e aotNan1.NW_018494782v1 1512094 0 - 1813869 C e cebCap1.NW_016107695v1 1262961 0 - 2164891 C e calJac3.chr4 169895352 0 + 171630274 C e dasNov3.JH569188 575585 2717 + 760995 I e colAng1.NW_012114488v1 15615867 0 - 23502949 C e canFam3.chr1 56173082 6728 + 122678785 I e manLeu1.NW_012106474v1 8223528 639 - 10857215 M e panTro5.chr6 173560613 4926 + 175400573 I a score=11070.000000 s hg38.chr6_KB021644v2_alt 109705 3 + 185823 GTG s panPan2.chr6 171799699 3 + 173848474 GTG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11482165 3 - 12463322 GTG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156308044 3 + 157873769 GTG i nomLeu3.chr3 C 0 T 115 s rheMac8.chr4 170337859 3 + 172585720 GTG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169083126 3 - 170955103 GTG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8369351 3 + 10161646 GTG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1400716 3 + 3144229 GTG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96687198 3 + 98384682 GTG i chlSab2.chr13 C 0 C 0 s saiBol1.JH378287 1300671 3 - 2905041 GTC i saiBol1.JH378287 T 49 C 0 e otoGar3.GL873575 10952962 165 - 12073884 I e aotNan1.NW_018494782v1 1512094 0 - 1813869 C e cebCap1.NW_016107695v1 1262961 0 - 2164891 C e calJac3.chr4 169895352 0 + 171630274 C e dasNov3.JH569188 575585 2717 + 760995 I e colAng1.NW_012114488v1 15615867 0 - 23502949 C e canFam3.chr1 56173082 6728 + 122678785 I e manLeu1.NW_012106474v1 8223528 639 - 10857215 M e panTro5.chr6 173560613 4926 + 175400573 I a score=50305.000000 s hg38.chr6_KB021644v2_alt 109708 14 + 185823 AACAGTGGTGATGG s panPan2.chr6 171799702 14 + 173848474 AACAGTGGTGATGG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11482168 14 - 12463322 AACAGTGGTGATGG i gorGor5.CYUI01015032v1 C 0 T 57 s nomLeu3.chr3 156307932 14 + 157873769 AACAGTGGTGACAG i nomLeu3.chr3 T 115 C 0 s rheMac8.chr4 170337862 14 + 172585720 GACAGTGGTGACAG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169083129 14 - 170955103 AACAGTGGTGACAG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8369354 14 + 10161646 AACAGTGGGGACAG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1400719 14 + 3144229 GACAGTGGTGACAG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96687201 14 + 98384682 AACAGTGGTGACAG i chlSab2.chr13 C 0 C 0 s saiBol1.JH378287 1300674 14 - 2905041 AACAGTGGTGATGG i saiBol1.JH378287 C 0 C 0 e otoGar3.GL873575 10952962 165 - 12073884 I e aotNan1.NW_018494782v1 1512094 0 - 1813869 C e cebCap1.NW_016107695v1 1262961 0 - 2164891 C e calJac3.chr4 169895352 0 + 171630274 C e dasNov3.JH569188 575585 2717 + 760995 I e colAng1.NW_012114488v1 15615867 0 - 23502949 C e canFam3.chr1 56173082 6728 + 122678785 I e manLeu1.NW_012106474v1 8223528 639 - 10857215 M e panTro5.chr6 173560613 4926 + 175400573 I a score=87471.000000 s hg38.chr6_KB021644v2_alt 109722 36 + 185823 AGCGTGTCAGGAGGTGCTGGGG-TGTA-CCAGGGGCAG s panPan2.chr6 171799716 36 + 173848474 AGCGTGTCAGGAGGTGCTGGGG-TGTA-TCAGGGGCAG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11482125 36 - 12463322 AGCGTGTTAGGAGGTGCTGGGG-TGTA-TCAGGGGCAG i gorGor5.CYUI01015032v1 T 57 C 0 s nomLeu3.chr3 156307946 36 + 157873769 AGCGTGTTAGGAGGTGCTGGGG-TGGG-CCGGGGCAGG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170337876 37 + 172585720 AGTGTGTTAGTAGATGCTGGGGTGGGC-CAGGGGCAGG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169083143 37 - 170955103 AGTGTGTTAGTAGATGCTGGGGTGGGC-CAGGGGCAGG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8369368 37 + 10161646 AGCATGTTAGGAGATGCTGGGGGTGTA-TTGGGGCAGG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1400733 38 + 3144229 AGCGTGTTAGCAGATGCTGGAGGTGTAGCAGGGGCAGG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96687215 36 + 98384682 AGCGTGTTAGGAGGTGCTGGGG-TGTA-TCGGGGCAGG i chlSab2.chr13 C 0 C 0 s saiBol1.JH378287 1300688 36 - 2905041 AGGATGTTAGGAGGTGCTGGGG-TGGG-CCAGGGGCAG i saiBol1.JH378287 C 0 T 53 e otoGar3.GL873575 10952962 165 - 12073884 I e aotNan1.NW_018494782v1 1512094 0 - 1813869 C e cebCap1.NW_016107695v1 1262961 0 - 2164891 C e calJac3.chr4 169895352 0 + 171630274 C e dasNov3.JH569188 575585 2717 + 760995 I e colAng1.NW_012114488v1 15615867 0 - 23502949 C e canFam3.chr1 56173082 6728 + 122678785 I e manLeu1.NW_012106474v1 8223528 639 - 10857215 M e panTro5.chr6 173560613 4926 + 175400573 I a score=13752.000000 s hg38.chr6_KB021644v2_alt 109758 4 + 185823 CTCT s panPan2.chr6 171799752 4 + 173848474 CTCT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11482161 4 - 12463322 CTCT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156307982 4 + 157873769 CTCT i nomLeu3.chr3 C 0 T 57 s rheMac8.chr4 170337913 4 + 172585720 CTCT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169083180 4 - 170955103 CTCT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8369405 4 + 10161646 CTCT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1400771 4 + 3144229 CTCT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96687251 4 + 98384682 CTCT i chlSab2.chr13 C 0 C 0 e otoGar3.GL873575 10952962 165 - 12073884 I e saiBol1.JH378287 1300724 53 - 2905041 T e aotNan1.NW_018494782v1 1512094 0 - 1813869 C e cebCap1.NW_016107695v1 1262961 0 - 2164891 C e calJac3.chr4 169895352 0 + 171630274 C e dasNov3.JH569188 575585 2717 + 760995 I e colAng1.NW_012114488v1 15615867 0 - 23502949 C e canFam3.chr1 56173082 6728 + 122678785 I e manLeu1.NW_012106474v1 8223528 639 - 10857215 M e panTro5.chr6 173560613 4926 + 175400573 I a score=122235.000000 s hg38.chr6_KB021644v2_alt 109762 39 + 185823 GTGAACAATGGTGATGGAGCGTGTTAGGAGGTGCTGGGG s panPan2.chr6 171799756 39 + 173848474 GTGAACAGTGGTGACGGAGCGTGTTAGGAGGTGCTGGGG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11482165 39 - 12463322 GTGAACAGTGGTGATGGAGCGTGTTAGGAGGTGCTGGGG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156307929 39 + 157873769 GTCAACAGTGGTGACAGAGCGTGTTAGGAGGTGCTGGGG i nomLeu3.chr3 T 57 C 0 s rheMac8.chr4 170337917 39 + 172585720 GTGAACAGTGGTGACAGAGCGTGTTAGGAGATGCTGGGG i rheMac8.chr4 C 0 I 1 s macFas5.chr4 169083184 39 - 170955103 GTGAACAGTGGTGACAGAGCGTGTTAGGAGATGCTGGGG i macFas5.chr4 C 0 I 1 s macNem1.NW_012011000v1 8369409 39 + 10161646 GTGAACAGTGGTGACAGATCATGTTAGGAGATGCTGGGG i macNem1.NW_012011000v1 C 0 T 115 s cerAty1.NW_012002071v1 1400775 39 + 3144229 GTGGACAGTGGTGACAGAGCGTGTTAGGAGGTGCTGGGG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96687255 39 + 98384682 GTGAACAGTGGTGACAGAGCGTGTTAGGAGGTGCTGGGG i chlSab2.chr13 C 0 C 0 e otoGar3.GL873575 10952962 165 - 12073884 I e saiBol1.JH378287 1300724 53 - 2905041 T e aotNan1.NW_018494782v1 1512094 0 - 1813869 C e cebCap1.NW_016107695v1 1262961 0 - 2164891 C e calJac3.chr4 169895352 0 + 171630274 C e dasNov3.JH569188 575585 2717 + 760995 I e colAng1.NW_012114488v1 15615867 0 - 23502949 C e canFam3.chr1 56173082 6728 + 122678785 I e manLeu1.NW_012106474v1 8223528 639 - 10857215 M e panTro5.chr6 173560613 4926 + 175400573 I a score=5236.000000 s hg38.chr6_KB021644v2_alt 109801 2 + 185823 TG s panPan2.chr6 171799795 2 + 173848474 TG i panPan2.chr6 C 0 T 57 s gorGor5.CYUI01015032v1 11482204 2 - 12463322 TG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156307968 2 + 157873769 TG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170337957 2 + 172585720 TG i rheMac8.chr4 I 1 C 0 s macFas5.chr4 169083224 2 - 170955103 TG i macFas5.chr4 I 1 C 0 s macNem1.NW_012011000v1 8369333 2 + 10161646 TG i macNem1.NW_012011000v1 T 115 C 0 s cerAty1.NW_012002071v1 1400814 2 + 3144229 TG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96687294 2 + 98384682 GG i chlSab2.chr13 C 0 C 0 e otoGar3.GL873575 10952962 165 - 12073884 I e saiBol1.JH378287 1300724 53 - 2905041 T e aotNan1.NW_018494782v1 1512094 0 - 1813869 C e cebCap1.NW_016107695v1 1262961 0 - 2164891 C e calJac3.chr4 169895352 0 + 171630274 C e dasNov3.JH569188 575585 2717 + 760995 I e colAng1.NW_012114488v1 15615867 0 - 23502949 C e canFam3.chr1 56173082 6728 + 122678785 I e manLeu1.NW_012106474v1 8223528 639 - 10857215 M e panTro5.chr6 173560613 4926 + 175400573 I a score=27107.000000 s hg38.chr6_KB021644v2_alt 109803 15 + 185823 TATT-GGGGCA-GCTCT s panPan2.chr6 171799740 16 + 173848474 TATCAGGGGCA-GCTCT i panPan2.chr6 T 57 C 0 s gorGor5.CYUI01015032v1 11482206 16 - 12463322 TATCAGGGGCA-GCTCT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156307970 16 + 157873769 -GGCCGGGGCAGGCTCT i nomLeu3.chr3 C 0 T 57 s rheMac8.chr4 170337959 16 + 172585720 TATT-GGGGCAGGCTCT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169083226 16 - 170955103 TATT-GGGGCAGGCTCT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8369335 16 + 10161646 TATC-AGGGCAGGCTCT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1400816 17 + 3144229 GGCCAGGGGCAGGCTCT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96687296 16 + 98384682 TATC-GGGGCAGGCTCT i chlSab2.chr13 C 0 C 0 e otoGar3.GL873575 10952962 165 - 12073884 I e saiBol1.JH378287 1300724 53 - 2905041 T e aotNan1.NW_018494782v1 1512094 0 - 1813869 C e cebCap1.NW_016107695v1 1262961 0 - 2164891 C e calJac3.chr4 169895352 0 + 171630274 C e dasNov3.JH569188 575585 2717 + 760995 I e colAng1.NW_012114488v1 15615867 0 - 23502949 C e canFam3.chr1 56173082 6728 + 122678785 I e manLeu1.NW_012106474v1 8223528 639 - 10857215 M e panTro5.chr6 173560613 4926 + 175400573 I a score=86688.000000 s hg38.chr6_KB021644v2_alt 109818 41 + 185823 GTGAA----------------------------------------------------------CAGTGGTGACGGAGCGTGTTAGGAGGTGCTGG-GGTG s panPan2.chr6 171799756 41 + 173848474 GTGAA----------------------------------------------------------CAGTGGTGACGGAGCGTGTTAGGAGGTGCTGG-GGTG i panPan2.chr6 C 0 T 150 s gorGor5.CYUI01015032v1 11482222 41 - 12463322 GTGAA----------------------------------------------------------CAGTGGTGACGGAACGTGTTAGGAGGTGCTGG-GGTG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156307929 41 + 157873769 GTCAA----------------------------------------------------------CAGTGGTGACAGAGCGTGTTAGGAGGTGCTGG-GGTG i nomLeu3.chr3 T 57 C 0 s rheMac8.chr4 170337975 42 + 172585720 GTGGA----------------------------------------------------------CAGGGGTGACAGAGTGTGTTAGCAGATGCTGGAGGTG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169083242 100 - 170955103 GTGGACAGTGGTGACAGAGTGTGTTAGCAGATGCTGGGGTGGGCCAGGGGCAGGTTCTGTGAACAGTGGGGACAGAGAGTGTTAGGAGATGCTGGGGGTG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8369351 42 + 10161646 GTGAA----------------------------------------------------------CAGTGGGGACAGAGCATGTTAGGAGATGCTGGGGGTG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1400833 37 + 3144229 GTGGA----------------------------------------------------------CAGTGGTGACAGAGTGTGTTAGGAGGTGCTGG----- i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96687312 42 + 98384682 GTGAA----------------------------------------------------------CAGTGGGGACAGAGTGTGTTAGTAGATGCTGGAGGTA i chlSab2.chr13 C 0 C 0 e otoGar3.GL873575 10952962 165 - 12073884 I e saiBol1.JH378287 1300724 53 - 2905041 T e aotNan1.NW_018494782v1 1512094 0 - 1813869 C e cebCap1.NW_016107695v1 1262961 0 - 2164891 C e calJac3.chr4 169895352 0 + 171630274 C e dasNov3.JH569188 575585 2717 + 760995 I e colAng1.NW_012114488v1 15615867 0 - 23502949 C e canFam3.chr1 56173082 6728 + 122678785 I e manLeu1.NW_012106474v1 8223528 639 - 10857215 M e panTro5.chr6 173560613 4926 + 175400573 I a score=928.000000 s hg38.chr6_KB021644v2_alt 109859 4 + 185823 TATC s gorGor5.CYUI01015032v1 11482263 4 - 12463322 GGCC i gorGor5.CYUI01015032v1 C 0 T 154 s nomLeu3.chr3 156307970 4 + 157873769 GGCC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170338017 4 + 172585720 TAGC i rheMac8.chr4 C 0 I 1 s macFas5.chr4 169083342 4 - 170955103 TATT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8369393 4 + 10161646 TATT i macNem1.NW_012011000v1 C 0 C 0 s chlSab2.chr13 96687354 4 + 98384682 TACC i chlSab2.chr13 C 0 I 1 e otoGar3.GL873575 10952962 165 - 12073884 I e saiBol1.JH378287 1300724 53 - 2905041 T e aotNan1.NW_018494782v1 1512094 0 - 1813869 C e cebCap1.NW_016107695v1 1262961 0 - 2164891 C e calJac3.chr4 169895352 0 + 171630274 C e dasNov3.JH569188 575585 2717 + 760995 I e colAng1.NW_012114488v1 15615867 0 - 23502949 C e canFam3.chr1 56173082 6728 + 122678785 I e cerAty1.NW_012002071v1 1400870 0 + 3144229 C e manLeu1.NW_012106474v1 8223528 639 - 10857215 M e panPan2.chr6 171799797 150 + 173848474 T e panTro5.chr6 173560613 4926 + 175400573 I a score=18185.000000 s hg38.chr6_KB021644v2_alt 109863 14 + 185823 GGGGCA-GCTCTGTG s nomLeu3.chr3 156307974 15 + 157873769 GGGGCAGGCTCTGTG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170338022 15 + 172585720 GGGGCAGGCTCTGTG i rheMac8.chr4 I 1 C 0 s macFas5.chr4 169083346 15 - 170955103 GGGGCAGGCTCTGTG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8369397 15 + 10161646 GGGGCAGGCTCTGTG i macNem1.NW_012011000v1 C 0 C 0 s chlSab2.chr13 96687359 15 + 98384682 CGGGCAGGCTCTGTG i chlSab2.chr13 I 1 C 0 e otoGar3.GL873575 10952962 165 - 12073884 I e saiBol1.JH378287 1300724 53 - 2905041 T e aotNan1.NW_018494782v1 1512094 0 - 1813869 C e cebCap1.NW_016107695v1 1262961 0 - 2164891 C e calJac3.chr4 169895352 0 + 171630274 C e dasNov3.JH569188 575585 2717 + 760995 I e colAng1.NW_012114488v1 15615867 0 - 23502949 C e canFam3.chr1 56173082 6728 + 122678785 I e cerAty1.NW_012002071v1 1400870 0 + 3144229 C e manLeu1.NW_012106474v1 8223528 639 - 10857215 M e gorGor5.CYUI01015032v1 11482267 154 - 12463322 T e panPan2.chr6 171799797 150 + 173848474 T e panTro5.chr6 173560613 4926 + 175400573 I a score=31234.000000 s hg38.chr6_KB021644v2_alt 109877 12 + 185823 AACAGTGGTGAC s panPan2.chr6 171799647 12 + 173848474 AACAGTGGTGAC i panPan2.chr6 T 150 C 0 s gorGor5.CYUI01015032v1 11482113 12 - 12463322 AACAGTGGTGAC i gorGor5.CYUI01015032v1 T 154 I 57 s nomLeu3.chr3 156307989 12 + 157873769 AACGGTGGTGAC i nomLeu3.chr3 C 0 I 2 s rheMac8.chr4 170338037 12 + 172585720 AACAGTGGTGAC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169083361 12 - 170955103 AACAGTGGTGAC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8369412 12 + 10161646 AACAGTGGTGAC i macNem1.NW_012011000v1 C 0 C 0 s chlSab2.chr13 96687374 12 + 98384682 AACAGTGGTGAC i chlSab2.chr13 C 0 C 0 e otoGar3.GL873575 10952962 165 - 12073884 I e saiBol1.JH378287 1300724 53 - 2905041 T e aotNan1.NW_018494782v1 1512094 0 - 1813869 C e cebCap1.NW_016107695v1 1262961 0 - 2164891 C e calJac3.chr4 169895352 0 + 171630274 C e dasNov3.JH569188 575585 2717 + 760995 I e colAng1.NW_012114488v1 15615867 0 - 23502949 C e canFam3.chr1 56173082 6728 + 122678785 I e cerAty1.NW_012002071v1 1400870 0 + 3144229 C e manLeu1.NW_012106474v1 8223528 639 - 10857215 M e panTro5.chr6 173560613 4926 + 175400573 I a score=-3317.000000 s hg38.chr6_KB021644v2_alt 109889 3 + 185823 AGC-- s panPan2.chr6 171799659 3 + 173848474 AGT-- i panPan2.chr6 C 0 I 27 s gorGor5.CYUI01015032v1 11482182 3 - 12463322 AGC-- i gorGor5.CYUI01015032v1 I 57 C 0 s nomLeu3.chr3 156308003 3 + 157873769 AGC-- i nomLeu3.chr3 I 2 C 0 s rheMac8.chr4 170338049 5 + 172585720 AGAGT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169083373 5 - 170955103 AGATC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8369424 5 + 10161646 AGATC i macNem1.NW_012011000v1 C 0 C 0 s chlSab2.chr13 96687386 5 + 98384682 AGAGT i chlSab2.chr13 C 0 C 0 e otoGar3.GL873575 10952962 165 - 12073884 I e saiBol1.JH378287 1300724 53 - 2905041 T e aotNan1.NW_018494782v1 1512094 0 - 1813869 C e cebCap1.NW_016107695v1 1262961 0 - 2164891 C e calJac3.chr4 169895352 0 + 171630274 C e dasNov3.JH569188 575585 2717 + 760995 I e colAng1.NW_012114488v1 15615867 0 - 23502949 C e canFam3.chr1 56173082 6728 + 122678785 I e cerAty1.NW_012002071v1 1400870 0 + 3144229 C e manLeu1.NW_012106474v1 8223528 639 - 10857215 M e panTro5.chr6 173560613 4926 + 175400573 I a score=33734.000000 s hg38.chr6_KB021644v2_alt 109892 25 + 185823 ATGTTAGGAGGTGCTGG-GGTGTATC s gorGor5.CYUI01015032v1 11482185 25 - 12463322 GTGTTAGGAGGTGCTGG-GGTGTATC i gorGor5.CYUI01015032v1 C 0 I 2 s nomLeu3.chr3 156308006 25 + 157873769 ATGTTAGGAGGTGCTGG-GGTGGGCC i nomLeu3.chr3 C 0 I 2 s rheMac8.chr4 170338054 25 + 172585720 GTGTTAGTAGATGCTGG-GGTGGGCC i rheMac8.chr4 C 0 I 2 s macFas5.chr4 169083378 26 - 170955103 ATGTTAGGAGATGCTGGAGGTGTAGC i macFas5.chr4 C 0 I 2 s macNem1.NW_012011000v1 8369429 26 + 10161646 ATGTTAGGAGATGCTGGGGGTGTATT i macNem1.NW_012011000v1 C 0 I 1 s cerAty1.NW_012002071v1 1400870 8 + 3144229 ------------------GGTGGGCC i cerAty1.NW_012002071v1 C 0 I 2 s chlSab2.chr13 96687391 25 + 98384682 GTGTTAGTAGATGCTGG-GGTGTATC i chlSab2.chr13 C 0 I 1 e otoGar3.GL873575 10952962 165 - 12073884 I e saiBol1.JH378287 1300724 53 - 2905041 T e aotNan1.NW_018494782v1 1512094 0 - 1813869 C e cebCap1.NW_016107695v1 1262961 0 - 2164891 C e calJac3.chr4 169895352 0 + 171630274 C e dasNov3.JH569188 575585 2717 + 760995 I e colAng1.NW_012114488v1 15615867 0 - 23502949 C e canFam3.chr1 56173082 6728 + 122678785 I e manLeu1.NW_012106474v1 8223528 639 - 10857215 M e panPan2.chr6 171799662 27 + 173848474 I e panTro5.chr6 173560613 4926 + 175400573 I a score=27740.000000 s hg38.chr6_KB021644v2_alt 109917 10 + 185823 GGGCA-GCTCT s panPan2.chr6 171799689 10 + 173848474 GGGCA-GCTCT i panPan2.chr6 I 27 C 0 s gorGor5.CYUI01015032v1 11482212 10 - 12463322 GGGCA-GCTCT i gorGor5.CYUI01015032v1 I 2 C 0 s nomLeu3.chr3 156308033 11 + 157873769 GAGCAGGCTCT i nomLeu3.chr3 I 2 C 0 s rheMac8.chr4 170338081 11 + 172585720 GGGCAGGCTCT i rheMac8.chr4 I 2 C 0 s macFas5.chr4 169083406 11 - 170955103 GGGCAGGCTCT i macFas5.chr4 I 2 C 0 s macNem1.NW_012011000v1 8369456 11 + 10161646 GGGCAGGCTCT i macNem1.NW_012011000v1 I 1 C 0 s cerAty1.NW_012002071v1 1400880 11 + 3144229 GGGCAGGCTCT i cerAty1.NW_012002071v1 I 2 C 0 s chlSab2.chr13 96687417 11 + 98384682 GGGCAGGCTCT i chlSab2.chr13 I 1 C 0 e otoGar3.GL873575 10952962 165 - 12073884 I e saiBol1.JH378287 1300724 53 - 2905041 T e aotNan1.NW_018494782v1 1512094 0 - 1813869 C e cebCap1.NW_016107695v1 1262961 0 - 2164891 C e calJac3.chr4 169895352 0 + 171630274 C e dasNov3.JH569188 575585 2717 + 760995 I e colAng1.NW_012114488v1 15615867 0 - 23502949 C e canFam3.chr1 56173082 6728 + 122678785 I e manLeu1.NW_012106474v1 8223528 639 - 10857215 M e panTro5.chr6 173560613 4926 + 175400573 I a score=11070.000000 s hg38.chr6_KB021644v2_alt 109927 3 + 185823 GTG s panPan2.chr6 171799699 3 + 173848474 GTG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11482222 3 - 12463322 GTG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156308044 3 + 157873769 GTG i nomLeu3.chr3 C 0 T 115 s rheMac8.chr4 170338092 3 + 172585720 GTG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169083417 3 - 170955103 GTG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8369467 3 + 10161646 GTG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1400891 3 + 3144229 GTG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96687428 3 + 98384682 GTG i chlSab2.chr13 C 0 C 0 s saiBol1.JH378287 1300671 3 - 2905041 GTC i saiBol1.JH378287 T 53 C 0 e otoGar3.GL873575 10952962 165 - 12073884 I e aotNan1.NW_018494782v1 1512094 0 - 1813869 C e cebCap1.NW_016107695v1 1262961 0 - 2164891 C e calJac3.chr4 169895352 0 + 171630274 C e dasNov3.JH569188 575585 2717 + 760995 I e colAng1.NW_012114488v1 15615867 0 - 23502949 C e canFam3.chr1 56173082 6728 + 122678785 I e manLeu1.NW_012106474v1 8223528 639 - 10857215 M e panTro5.chr6 173560613 4926 + 175400573 I a score=47793.000000 s hg38.chr6_KB021644v2_alt 109930 14 + 185823 AACAATGGTGACGG s panPan2.chr6 171799702 14 + 173848474 AACAGTGGTGATGG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11482225 14 - 12463322 AACAGTGGTGACGG i gorGor5.CYUI01015032v1 C 0 T 114 s nomLeu3.chr3 156307932 14 + 157873769 AACAGTGGTGACAG i nomLeu3.chr3 T 115 C 0 s rheMac8.chr4 170338095 14 + 172585720 AACAGTGGGGACAG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169083420 14 - 170955103 AACAGTGGTGACAG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8369470 14 + 10161646 GACAGTGGTGACAG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1400894 14 + 3144229 AACCGTGGTGACAG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96687431 14 + 98384682 AACAGTGGGGACAG i chlSab2.chr13 C 0 C 0 s saiBol1.JH378287 1300674 14 - 2905041 AACAGTGGTGATGG i saiBol1.JH378287 C 0 C 0 e otoGar3.GL873575 10952962 165 - 12073884 I e aotNan1.NW_018494782v1 1512094 0 - 1813869 C e cebCap1.NW_016107695v1 1262961 0 - 2164891 C e calJac3.chr4 169895352 0 + 171630274 C e dasNov3.JH569188 575585 2717 + 760995 I e colAng1.NW_012114488v1 15615867 0 - 23502949 C e canFam3.chr1 56173082 6728 + 122678785 I e manLeu1.NW_012106474v1 8223528 639 - 10857215 M e panTro5.chr6 173560613 4926 + 175400573 I a score=7466.000000 s hg38.chr6_KB021644v2_alt 109944 3 + 185823 AGC s panPan2.chr6 171799716 3 + 173848474 AGC i panPan2.chr6 C 0 T 57 s gorGor5.CYUI01015032v1 11482125 3 - 12463322 AGC i gorGor5.CYUI01015032v1 T 114 C 0 s nomLeu3.chr3 156307946 3 + 157873769 AGC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170338109 3 + 172585720 AGA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169083434 3 - 170955103 AGT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8369484 3 + 10161646 AGT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1400908 3 + 3144229 AGC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96687445 3 + 98384682 AGT i chlSab2.chr13 C 0 C 0 s saiBol1.JH378287 1300688 3 - 2905041 AGG i saiBol1.JH378287 C 0 C 0 e otoGar3.GL873575 10952962 165 - 12073884 I e aotNan1.NW_018494782v1 1512094 0 - 1813869 C e cebCap1.NW_016107695v1 1262961 0 - 2164891 C e calJac3.chr4 169895352 0 + 171630274 C e dasNov3.JH569188 575585 2717 + 760995 I e colAng1.NW_012114488v1 15615867 0 - 23502949 C e canFam3.chr1 56173082 6728 + 122678785 I e manLeu1.NW_012106474v1 8223528 639 - 10857215 M e panTro5.chr6 173560613 4926 + 175400573 I a score=95004.000000 s hg38.chr6_KB021644v2_alt 109947 33 + 185823 GTGTTAGGAGGTGCTGG-GGTGTACCAGGGGCA-G s panPan2.chr6 171799662 33 + 173848474 GTGTTAGGAGGTGCTGG-GGTGGACCAGGGGCA-G i panPan2.chr6 T 57 C 0 s gorGor5.CYUI01015032v1 11482128 33 - 12463322 GTGTTAGGAGGTGCTGG-GGTGTATCAGGGGCA-G i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156307949 33 + 157873769 GTGTTAGGAGGTGCTGG-GGTGGGCCGGGGCAG-G i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170338112 34 + 172585720 GTGTTAGGAGATGCTGG-GGGTGTATTGGGGCAGG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169083437 34 - 170955103 GTGTTAGTAGATGCTGG-GGTGGGCCAGGGGCAGG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8369487 34 + 10161646 GTGTTAGTAGATGCTGG-GGTGGGCCAGGGGCAGG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1400911 34 + 3144229 GTGTTAGGAGGTGCTGG-GGTGGGCCAGGGGCAGG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96687448 35 + 98384682 GTGTTAGCAGATGCTGGAGGTGTAGCAGGGGCAGG i chlSab2.chr13 C 0 C 0 s saiBol1.JH378287 1300691 33 - 2905041 ATGTTAGGAGGTGCTGG-GGTGGGCCAGGGGCA-G i saiBol1.JH378287 C 0 T 53 e otoGar3.GL873575 10952962 165 - 12073884 I e aotNan1.NW_018494782v1 1512094 0 - 1813869 C e cebCap1.NW_016107695v1 1262961 0 - 2164891 C e calJac3.chr4 169895352 0 + 171630274 C e dasNov3.JH569188 575585 2717 + 760995 I e colAng1.NW_012114488v1 15615867 0 - 23502949 C e canFam3.chr1 56173082 6728 + 122678785 I e manLeu1.NW_012106474v1 8223528 639 - 10857215 M e panTro5.chr6 173560613 4926 + 175400573 I a score=13752.000000 s hg38.chr6_KB021644v2_alt 109980 4 + 185823 CTCT s panPan2.chr6 171799695 4 + 173848474 CTCT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11482161 4 - 12463322 CTCT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156307982 4 + 157873769 CTCT i nomLeu3.chr3 C 0 T 57 s rheMac8.chr4 170338146 4 + 172585720 CTCT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169083471 4 - 170955103 CTCT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8369521 4 + 10161646 CTCT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1400945 4 + 3144229 CTCT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96687483 4 + 98384682 CTCT i chlSab2.chr13 C 0 C 0 e otoGar3.GL873575 10952962 165 - 12073884 I e saiBol1.JH378287 1300724 53 - 2905041 T e aotNan1.NW_018494782v1 1512094 0 - 1813869 C e cebCap1.NW_016107695v1 1262961 0 - 2164891 C e calJac3.chr4 169895352 0 + 171630274 C e dasNov3.JH569188 575585 2717 + 760995 I e colAng1.NW_012114488v1 15615867 0 - 23502949 C e canFam3.chr1 56173082 6728 + 122678785 I e manLeu1.NW_012106474v1 8223528 639 - 10857215 M e panTro5.chr6 173560613 4926 + 175400573 I a score=113036.000000 s hg38.chr6_KB021644v2_alt 109984 44 + 185823 GTGAACAATGGTGATGGAGCGTGTTAGGAGGTGCTGG-GGTGTAT s panPan2.chr6 171799699 44 + 173848474 GTGAACAGTGGTGATGGAGCGTGTCAGGAGGTGCTGG-GGTGTAT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11482165 44 - 12463322 GTGAACAGTGGTGATGGAGCGTGTTAGGAGGTGCTGG-GGTGTAT i gorGor5.CYUI01015032v1 C 0 I 2 s nomLeu3.chr3 156307929 44 + 157873769 GTCAACAGTGGTGACAGAGCGTGTTAGGAGGTGCTGG-GGTGGGC i nomLeu3.chr3 T 57 C 0 s rheMac8.chr4 170338150 45 + 172585720 GTGAACAGTGGTGACAGAGCGTGTTAGTAGATGCTGGAGGTGTAG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169083475 45 - 170955103 GTGAACAGTGGGGACAGAGAGTGTTAGGAGATGCTGGGGGTGTAT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8369525 45 + 10161646 GTGAACAGTGGGGACAGAGAGTGTTAGGAGATGCTGGGGGTGTAT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1400949 44 + 3144229 GTGGACAGTGGTGACAGAGTGTGTTAGGAGGTGCTGG-GGTGTAG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96687487 44 + 98384682 GTGAACAGTGGTGATAAAGCGTATTAGGAGGTGCTGG-GGTGGGC i chlSab2.chr13 C 0 C 0 e otoGar3.GL873575 10952962 165 - 12073884 I e saiBol1.JH378287 1300724 53 - 2905041 T e aotNan1.NW_018494782v1 1512094 0 - 1813869 C e cebCap1.NW_016107695v1 1262961 0 - 2164891 C e calJac3.chr4 169895352 0 + 171630274 C e dasNov3.JH569188 575585 2717 + 760995 I e colAng1.NW_012114488v1 15615867 0 - 23502949 C e canFam3.chr1 56173082 6728 + 122678785 I e manLeu1.NW_012106474v1 8223528 639 - 10857215 M e panTro5.chr6 173560613 4926 + 175400573 I a score=808.000000 s hg38.chr6_KB021644v2_alt 110028 1 + 185823 T s panPan2.chr6 171799743 1 + 173848474 C i panPan2.chr6 C 0 T 56 s nomLeu3.chr3 156307973 1 + 157873769 C i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170338195 1 + 172585720 C i rheMac8.chr4 C 0 I 1 s macFas5.chr4 169083520 1 - 170955103 T i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8369570 1 + 10161646 T i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1400993 1 + 3144229 C i cerAty1.NW_012002071v1 C 0 I 1 s chlSab2.chr13 96687531 1 + 98384682 C i chlSab2.chr13 C 0 I 1 e otoGar3.GL873575 10952962 165 - 12073884 I e saiBol1.JH378287 1300724 53 - 2905041 T e aotNan1.NW_018494782v1 1512094 0 - 1813869 C e cebCap1.NW_016107695v1 1262961 0 - 2164891 C e calJac3.chr4 169895352 0 + 171630274 C e dasNov3.JH569188 575585 2717 + 760995 I e colAng1.NW_012114488v1 15615867 0 - 23502949 C e canFam3.chr1 56173082 6728 + 122678785 I e manLeu1.NW_012106474v1 8223528 639 - 10857215 M e gorGor5.CYUI01015032v1 11482209 2 - 12463322 I e panTro5.chr6 173560613 4926 + 175400573 I a score=21276.000000 s hg38.chr6_KB021644v2_alt 110029 6 + 185823 GGGGCA s panPan2.chr6 171799688 6 + 173848474 GGGGCA i panPan2.chr6 T 56 C 0 s gorGor5.CYUI01015032v1 11482211 6 - 12463322 GGGGCA i gorGor5.CYUI01015032v1 I 2 C 0 s nomLeu3.chr3 156307974 6 + 157873769 GGGGCA i nomLeu3.chr3 C 0 I 1 s rheMac8.chr4 170338197 6 + 172585720 GGGGCA i rheMac8.chr4 I 1 I 1 s macFas5.chr4 169083521 6 - 170955103 GGGGCA i macFas5.chr4 C 0 I 1 s macNem1.NW_012011000v1 8369571 6 + 10161646 GGGGCA i macNem1.NW_012011000v1 C 0 I 1 s cerAty1.NW_012002071v1 1400995 6 + 3144229 GGGGCA i cerAty1.NW_012002071v1 I 1 I 1 s chlSab2.chr13 96687533 6 + 98384682 GGGGCA i chlSab2.chr13 I 1 I 1 e otoGar3.GL873575 10952962 165 - 12073884 I e saiBol1.JH378287 1300724 53 - 2905041 T e aotNan1.NW_018494782v1 1512094 0 - 1813869 C e cebCap1.NW_016107695v1 1262961 0 - 2164891 C e calJac3.chr4 169895352 0 + 171630274 C e dasNov3.JH569188 575585 2717 + 760995 I e colAng1.NW_012114488v1 15615867 0 - 23502949 C e canFam3.chr1 56173082 6728 + 122678785 I e manLeu1.NW_012106474v1 8223528 639 - 10857215 M e panTro5.chr6 173560613 4926 + 175400573 I a score=21690.000000 s hg38.chr6_KB021644v2_alt 110035 5 + 185823 GCTCT s panPan2.chr6 171799694 5 + 173848474 GCTCT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11482217 5 - 12463322 GCTCT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156307981 5 + 157873769 GCTCT i nomLeu3.chr3 I 1 C 0 s rheMac8.chr4 170338204 5 + 172585720 GCTCT i rheMac8.chr4 I 1 C 0 s macFas5.chr4 169083528 5 - 170955103 GCTCT i macFas5.chr4 I 1 C 0 s macNem1.NW_012011000v1 8369578 5 + 10161646 GCTCT i macNem1.NW_012011000v1 I 1 C 0 s cerAty1.NW_012002071v1 1401002 5 + 3144229 GCTCT i cerAty1.NW_012002071v1 I 1 C 0 s chlSab2.chr13 96687540 5 + 98384682 GCTCT i chlSab2.chr13 I 1 C 0 s manLeu1.NW_012106474v1 8224176 5 - 10857215 GCTCT i manLeu1.NW_012106474v1 M 639 C 0 e otoGar3.GL873575 10952962 165 - 12073884 I e saiBol1.JH378287 1300724 53 - 2905041 T e aotNan1.NW_018494782v1 1512094 0 - 1813869 C e cebCap1.NW_016107695v1 1262961 0 - 2164891 C e calJac3.chr4 169895352 0 + 171630274 C e dasNov3.JH569188 575585 2717 + 760995 I e colAng1.NW_012114488v1 15615867 0 - 23502949 C e canFam3.chr1 56173082 6728 + 122678785 I e panTro5.chr6 173560613 4926 + 175400573 I a score=13755.000000 s hg38.chr6_KB021644v2_alt 110040 3 + 185823 GTG s panPan2.chr6 171799699 3 + 173848474 GTG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11482222 3 - 12463322 GTG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156307986 3 + 157873769 GTG i nomLeu3.chr3 C 0 T 57 s rheMac8.chr4 170338209 3 + 172585720 GTG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169083533 3 - 170955103 GTG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8369583 3 + 10161646 GTG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1401007 3 + 3144229 GTG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96687545 3 + 98384682 GTG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8224181 3 - 10857215 GTG i manLeu1.NW_012106474v1 C 0 C 0 s saiBol1.JH378287 1300671 3 - 2905041 GTC i saiBol1.JH378287 T 53 C 0 e otoGar3.GL873575 10952962 165 - 12073884 I e aotNan1.NW_018494782v1 1512094 0 - 1813869 C e cebCap1.NW_016107695v1 1262961 0 - 2164891 C e calJac3.chr4 169895352 0 + 171630274 C e dasNov3.JH569188 575585 2717 + 760995 I e colAng1.NW_012114488v1 15615867 0 - 23502949 C e canFam3.chr1 56173082 6728 + 122678785 I e panTro5.chr6 173560613 4926 + 175400573 I a score=179421.000000 s hg38.chr6_KB021644v2_alt 110043 38 + 185823 AACAGTGGTGACGGAGCGTGTTAGGAGGTGCTG------------------------------------------------------------G-GGTG s panPan2.chr6 171799702 38 + 173848474 AACAGTGGTGATGGAGCGTGTCAGGAGGTGCTG------------------------------------------------------------G-GGTG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11482225 38 - 12463322 AACAGTGGTGACGGAACGTGTTAGGAGGTGCTG------------------------------------------------------------G-GGTG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156307932 38 + 157873769 AACAGTGGTGACAGAGCGTGTTAGGAGGTGCTG------------------------------------------------------------G-GGTG i nomLeu3.chr3 T 57 C 0 s rheMac8.chr4 170338212 39 + 172585720 AACAGTGGTGACAGAGCGTGTTAGGCGGTGCTG-----------------------------------------------------------AG-GGTG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169083536 98 - 170955103 AACAGTGGTGACAGAGCGTGTTAGTAGATGCTGGAGGTGTAGCAGGGGCAGGCTCTGTGAACAGTGGTGACAGAGCGTGTTAGGCGGTGCTGAG-GGTG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8369586 38 + 10161646 AACAGTGGTGACAGAGTATGTTAGGAGGTGCTG------------------------------------------------------------G-GGTG i macNem1.NW_012011000v1 C 0 I 548 s cerAty1.NW_012002071v1 1401010 38 + 3144229 AACAGTGGTGACAGAGCGTGTTAGGAGGTGCTG------------------------------------------------------------G-GGTG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96687548 39 + 98384682 AACAGTGGTGACAAAGCGTGTTAGCAGATGCTG------------------------------------------------------------GAGGTG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8224184 38 - 10857215 AACAGTGGGGACAGAGCGTGTTAGGAGGTGCTG------------------------------------------------------------G-GGTG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15615867 38 - 23502949 AACAGTGGTGACAGAGCGTGTTAGGAGGTGCTG------------------------------------------------------------G-GGTG i colAng1.NW_012114488v1 C 0 C 0 s saiBol1.JH378287 1300674 38 - 2905041 AACAGTGGTGATGGAGGATGTTAGGAGGTGCTG------------------------------------------------------------G-GGTG i saiBol1.JH378287 C 0 C 0 e otoGar3.GL873575 10952962 165 - 12073884 I e aotNan1.NW_018494782v1 1512094 0 - 1813869 C e cebCap1.NW_016107695v1 1262961 0 - 2164891 C e calJac3.chr4 169895352 0 + 171630274 C e dasNov3.JH569188 575585 2717 + 760995 I e canFam3.chr1 56173082 6728 + 122678785 I e panTro5.chr6 173560613 4926 + 175400573 I a score=25650.000000 s hg38.chr6_KB021644v2_alt 110081 11 + 185823 GGCCAGGGGCA s panPan2.chr6 171799740 11 + 173848474 TATCAGGGGCA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11482263 11 - 12463322 GGCCAGGGGCA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156307970 11 + 157873769 GGCCGGGGCAG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170338251 10 + 172585720 TATC-GGGGCA i rheMac8.chr4 C 0 I 1 s macFas5.chr4 169083634 10 - 170955103 TATC-GGGGCA i macFas5.chr4 C 0 I 1 s cerAty1.NW_012002071v1 1401048 11 + 3144229 TAGCAGGGGCA i cerAty1.NW_012002071v1 C 0 I 1 s chlSab2.chr13 96687587 11 + 98384682 TAGCAGGGGCA i chlSab2.chr13 C 0 I 1 s manLeu1.NW_012106474v1 8224222 11 - 10857215 TAGCAGGGGCA i manLeu1.NW_012106474v1 C 0 I 1 s colAng1.NW_012114488v1 15615905 11 - 23502949 TAGCAGGGGCA i colAng1.NW_012114488v1 C 0 I 1 s saiBol1.JH378287 1300712 11 - 2905041 GGCCAGGGGCA i saiBol1.JH378287 C 0 C 0 e otoGar3.GL873575 10952962 165 - 12073884 I e aotNan1.NW_018494782v1 1512094 0 - 1813869 C e cebCap1.NW_016107695v1 1262961 0 - 2164891 C e calJac3.chr4 169895352 0 + 171630274 C e dasNov3.JH569188 575585 2717 + 760995 I e canFam3.chr1 56173082 6728 + 122678785 I e macNem1.NW_012011000v1 8369624 548 + 10161646 I e panTro5.chr6 173560613 4926 + 175400573 I a score=6600.000000 s hg38.chr6_KB021644v2_alt 110092 1 + 185823 G s panPan2.chr6 171799751 1 + 173848474 G i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11482274 1 - 12463322 G i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156307981 1 + 157873769 G i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170338262 1 + 172585720 G i rheMac8.chr4 I 1 C 0 s macFas5.chr4 169083645 1 - 170955103 G i macFas5.chr4 I 1 C 0 s macNem1.NW_012011000v1 8370172 1 + 10161646 G i macNem1.NW_012011000v1 I 548 C 0 s cerAty1.NW_012002071v1 1401060 1 + 3144229 G i cerAty1.NW_012002071v1 I 1 C 0 s chlSab2.chr13 96687599 1 + 98384682 G i chlSab2.chr13 I 1 C 0 s manLeu1.NW_012106474v1 8224234 1 - 10857215 G i manLeu1.NW_012106474v1 I 1 C 0 s colAng1.NW_012114488v1 15615917 1 - 23502949 G i colAng1.NW_012114488v1 I 1 C 0 s saiBol1.JH378287 1300723 1 - 2905041 G i saiBol1.JH378287 C 0 T 53 e otoGar3.GL873575 10952962 165 - 12073884 I e aotNan1.NW_018494782v1 1512094 0 - 1813869 C e cebCap1.NW_016107695v1 1262961 0 - 2164891 C e calJac3.chr4 169895352 0 + 171630274 C e dasNov3.JH569188 575585 2717 + 760995 I e canFam3.chr1 56173082 6728 + 122678785 I e panTro5.chr6 173560613 4926 + 175400573 I a score=21010.000000 s hg38.chr6_KB021644v2_alt 110093 4 + 185823 CTCT s panPan2.chr6 171799752 4 + 173848474 CTCT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11482275 4 - 12463322 CTCT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156307982 4 + 157873769 CTCT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170338263 4 + 172585720 CTCT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169083646 4 - 170955103 CTCT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8370173 4 + 10161646 CTCT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1401061 4 + 3144229 CTCT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96687600 4 + 98384682 CTCT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8224235 4 - 10857215 CTCT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15615918 4 - 23502949 CTCT i colAng1.NW_012114488v1 C 0 C 0 e otoGar3.GL873575 10952962 165 - 12073884 I e saiBol1.JH378287 1300724 53 - 2905041 T e aotNan1.NW_018494782v1 1512094 0 - 1813869 C e cebCap1.NW_016107695v1 1262961 0 - 2164891 C e calJac3.chr4 169895352 0 + 171630274 C e dasNov3.JH569188 575585 2717 + 760995 I e canFam3.chr1 56173082 6728 + 122678785 I e panTro5.chr6 173560613 4926 + 175400573 I a score=16731.000000 s hg38.chr6_KB021644v2_alt 110097 3 + 185823 GTG s panPan2.chr6 171799756 3 + 173848474 GTG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11482279 3 - 12463322 GTG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156307986 3 + 157873769 GTG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170338267 3 + 172585720 GTG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169083650 3 - 170955103 GTG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8370177 3 + 10161646 GTG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1401065 3 + 3144229 GTG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96687604 3 + 98384682 GTG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8224239 3 - 10857215 GTG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15615922 3 - 23502949 GTG i colAng1.NW_012114488v1 C 0 C 0 s saiBol1.JH378287 1300671 3 - 2905041 GTC i saiBol1.JH378287 T 53 C 0 e otoGar3.GL873575 10952962 165 - 12073884 I e aotNan1.NW_018494782v1 1512094 0 - 1813869 C e cebCap1.NW_016107695v1 1262961 0 - 2164891 C e calJac3.chr4 169895352 0 + 171630274 C e dasNov3.JH569188 575585 2717 + 760995 I e canFam3.chr1 56173082 6728 + 122678785 I e panTro5.chr6 173560613 4926 + 175400573 I a score=8281.000000 s hg38.chr6_KB021644v2_alt 110100 1 + 185823 A s panPan2.chr6 171799759 1 + 173848474 A i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11482282 1 - 12463322 A i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156307989 1 + 157873769 A i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170338270 1 + 172585720 A i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169083653 1 - 170955103 A i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8370180 1 + 10161646 A i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1401068 1 + 3144229 A i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96687607 1 + 98384682 A i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8224242 1 - 10857215 A i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15615925 1 - 23502949 A i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169895352 1 + 171630274 A i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1300674 1 - 2905041 A i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1262961 1 - 2164891 A i cebCap1.NW_016107695v1 C 0 C 0 e otoGar3.GL873575 10952962 165 - 12073884 I e aotNan1.NW_018494782v1 1512094 0 - 1813869 C e dasNov3.JH569188 575585 2717 + 760995 I e canFam3.chr1 56173082 6728 + 122678785 I e panTro5.chr6 173560613 4926 + 175400573 I a score=94703.000000 s hg38.chr6_KB021644v2_alt 110101 11 + 185823 ACAGTGGTGAC s panPan2.chr6 171799760 11 + 173848474 ACAGTGGTGAC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11482283 11 - 12463322 ACAGTGGTGAT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156307990 11 + 157873769 ACGGTGGTGAC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170338271 11 + 172585720 ACAGTGGTGAT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169083654 11 - 170955103 ACAGTGGTGAT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8370181 11 + 10161646 ACGGTGGTGAT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1401069 11 + 3144229 ACAGTGGGGAC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96687608 11 + 98384682 ACAGTGGTGAT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8224243 11 - 10857215 ACAGTGGTGAC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15615926 11 - 23502949 ACAGTGGGGAC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169895353 11 + 171630274 ACAGTGGTGAT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1300675 11 - 2905041 ACAGTGGTGAT i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1262962 11 - 2164891 ACAGTGGTGAT i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1512094 11 - 1813869 ACAGTGGTGAC i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10952962 165 - 12073884 I e dasNov3.JH569188 575585 2717 + 760995 I e canFam3.chr1 56173082 6728 + 122678785 I e panTro5.chr6 173560613 4926 + 175400573 I a score=217908.000000 s hg38.chr6_KB021644v2_alt 110112 27 + 185823 GGAGCGTGTTAGGAGGTGCTGGGGT-GG s panTro5.chr6 173565539 27 + 175400573 GGAGCGTGTTAGGAGGTGCTGGGGT-GG i panTro5.chr6 I 4926 C 0 s panPan2.chr6 171799771 27 + 173848474 GGAGCGTGTTAGGAGGTGCTGGGGT-GG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11482294 27 - 12463322 GGAGCGTGTTAGGAGGTGCTGGGGT-GG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156308001 28 + 157873769 ACAGCATGTTAGGAGGTGCTGGGGTGGG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170338282 28 + 172585720 AAAGCATGTTAGGAGGTGCTGGGGTGGG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169083665 28 - 170955103 AAAGCATGTTAGGAGGTGCTGGGGTGGG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8370192 28 + 10161646 AAAGCATGTTAGGAGGTGCTGGGGTGGG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1401080 28 + 3144229 AGAGCGTGTTAGAAGGTGCTGGGGTGGG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96687619 28 + 98384682 AAAGCGTATTAGGAGGTGCTGGGGTGGG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8224254 28 - 10857215 AAAGCGTATTAGGAGGTGCTGGGGTGGG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15615937 28 - 23502949 AGAGTGTGTTAGGAGGTGCTGGGGTGGG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169895364 21 + 171630274 GGAGTGTGTTAGGAGGTGCTG------- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1300686 27 - 2905041 GGAGGATGTTAGGAGGTGCTGGGGTGG- i saiBol1.JH378287 C 0 I 4 s cebCap1.NW_016107695v1 1262973 27 - 2164891 GGAGCGTGTTAGGAGGTGCTGGGTGGG- i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1512105 27 - 1813869 GGAGCGTGTTAGGAGGTGctggggtgg- i aotNan1.NW_018494782v1 C 0 I 7 e otoGar3.GL873575 10952962 165 - 12073884 I e dasNov3.JH569188 575585 2717 + 760995 I e canFam3.chr1 56173082 6728 + 122678785 I a score=17645.000000 s hg38.chr6_KB021644v2_alt 110139 3 + 185823 CCT s panTro5.chr6 173565566 3 + 175400573 CCT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171799798 3 + 173848474 CCT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11482321 3 - 12463322 CCC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156308029 3 + 157873769 CCA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170338310 3 + 172585720 CCA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169083693 3 - 170955103 CCA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8370220 3 + 10161646 CCA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1401108 3 + 3144229 CCA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96687647 3 + 98384682 CCA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8224282 3 - 10857215 CCA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15615965 3 - 23502949 CCA i colAng1.NW_012114488v1 C 0 C 0 s cebCap1.NW_016107695v1 1263000 3 - 2164891 CCA i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1512139 3 - 1813869 cca i aotNan1.NW_018494782v1 I 7 C 0 e otoGar3.GL873575 10952962 165 - 12073884 I e saiBol1.JH378287 1300713 4 - 2905041 I e calJac3.chr4 169895385 0 + 171630274 C e dasNov3.JH569188 575585 2717 + 760995 I e canFam3.chr1 56173082 6728 + 122678785 I a score=906108.000000 s hg38.chr6_KB021644v2_alt 110142 105 + 185823 GGGGCAGGCTCTGTGCTGTCGACACTGGATCTTCCATCTGGGCAGGGCTCATTgtctcttgaagaaagtgacagctacagaggcttcaaggaagcaggagtggg--c s panTro5.chr6 173565569 105 + 175400573 GGGGCAGGCTCTGTGCTGTCGACACTGGATCTTCCATCTGGGCAGGGCTCATTGTCTCTTGGAGAAAGTGACAGCTACAGAGGCTTCAAGGAAGCAGGAGTGGG--C i panTro5.chr6 C 0 C 0 s panPan2.chr6 171799801 105 + 173848474 GGGGCAGGCTCTGTGCTGTCGACACTGGATCTTCCATCTGGGCAGGGCTCATTgtctcttggagaaagtgacagctacagaggcttcaaggaagcaggagtggg--c i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11482324 105 - 12463322 AGGGCAGGCTCTGTGCCGTCAACACTGGATCTTCCATCTGGGCAGGGCTCATTgtctcttggagaaagtgacagctacagaggcttcaaggaagcaggagtggg--c i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156308032 105 + 157873769 GGAGCAGGCTCTGTGCTGTCAACACTGGATCTTCCATCTGGGTAGGGCTCATTGTCTCTTGGAGAAAGTGACAGCTGCAGAGGCTTCAAGGAAGCGTGACTGGG--C i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170338313 105 + 172585720 GGGGCAGGTTCTGTGCTGTTGACACTGGATCTTCCATCTGGGCAGGGCTCATTGTCTCGTCGAGAAAGTGACAGCTACAGAGGCTTCAAAGAAGAGGGAGTGAG--C i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169083696 105 - 170955103 GGGGCAGGTTCTGTGCTGTTGACACTGGATCTTCCATCTGGGCAGGGCTCATTGTCTCGTCGAGAAAGTGACAGCTACAGAGGCTTCAAAGAAGAGGGAGTGAG--C i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8370223 105 + 10161646 AGGGCAGGTTCTGTGCTGTTGACACTGGATCTTCCATCTGGGCAGGGCTCATTGTCTCGTCGAGAAAGTGACAGCTACAGAGGCTTCAAAGAAGAGGGAGTGAG--C i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1401111 105 + 3144229 GGGGCAGGTTCTGTGCTGTTGACACTGAATCTTCCATCAGGGCAGGGCTCATTGTCTCGTCGAGAAATTGACAGCTACAGAGGCTTCAAAGAAGAGGGAGTGAG--C i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96687650 105 + 98384682 GGGGCAGGTTCTGTGCTGTTGACACTGGATCTTCCATCCGGGCAGGGCTCATTGTCTTGTCGAGAAAGTGACAGCTATGGAGGCTTCAAAGAAGAGGGAGTGAG--C i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8224285 105 - 10857215 GGGGCAGGTTCTGTGCTGTTGACACTGAATCTTCCATCTGGGCAGGGCTCATTGTCTCGTCGAGAAAGTGACAGCTACAGAGGCTTCAAAGAAGAGGGAGTGAG--C i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15615968 105 - 23502949 AGGGCAGGTTCTGTGCTGTTGACACTGGATCTTCCATCtgggcagggctcattgtctcgttgagaaagtgacagctacagaggcttcaaagaagacggagtgag--c i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169895385 86 + 171630274 ------------------TCCACCCTGGAGCCTCCATCTAGGCAGGGCCCATTGTCTCATGGAGAAACTGACAGCTACAGAGGCTCCAGAGAAGAGAAAGAGAG--- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1300717 104 - 2905041 GGGGCAGGATCTGTGCTGTCCACCCTGGAGCCTCCATCTAGGCAGGGACCATTGTCTCATGGAGAAACTGACAGCTACAGAGGCTCCAGAGGAGAGAAAGTGAG--- i saiBol1.JH378287 I 4 C 0 s cebCap1.NW_016107695v1 1263003 105 - 2164891 GGGGCAGGATGTGTGCTGTCCACCCTGGAGCCTCCATCTAGGCAGGGCCCATTGTCTCATGGAGAAACTGACAGCTACAGAGGCTCCAGAAAAGAGAAAGTGAGC-- i cebCap1.NW_016107695v1 C 0 I 54 s aotNan1.NW_018494782v1 1512142 105 - 1813869 gggccaggatctgtgcTGTCCAACCTGGAGCCTCCATCTAGGCAGGGCCCATTGTCTCATGGAGAAACTGACAGCTACAGAGGGTCCAGAGAAGAGAAAGTGAG-C- i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10952962 165 - 12073884 I e dasNov3.JH569188 575585 2717 + 760995 I e canFam3.chr1 56173082 6728 + 122678785 I a score=347923.000000 s hg38.chr6_KB021644v2_alt 110247 57 + 185823 c------------------GTGCAGATTGTATGAAAGCGCCCTGGCCATTAACACCTTTCACCGAAGCCCGACGG s panTro5.chr6 173565674 57 + 175400573 C------------------GTGCAGATTGTATGAAAGTGCCCCGGCCATTAACACCTTTCACCGAAGCCCAACGG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171799906 57 + 173848474 c------------------GTGCAGATTGTATGAAAGTGCCCCGGCCATTAACACCTTTCACCGAAGCCCAACGG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11482429 57 - 12463322 c------------------GTGCAGATTGTATGAAAGCGCCCCGGCCATTAGCACCTTTCACCGAAGCCCGGCGG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156308137 57 + 157873769 T------------------GTGCAGATTGTGTGAAAGTGCCCCGGCCATTAGCACCTTTCCCCGAAGCCCGACGG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170338418 75 + 172585720 CGATTGTATGATCTACAACGTGCAGATGGTATGAAAGGGCCCCAGCCATTTACAACTTTCACCGAAGCCTGATGG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169083801 75 - 170955103 CGATTGTATGATCTACAACGTGCAGATGGTATGAAAGGGCCCCAGCCATTTACAACTTTCACCGAAGCCTGACGG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8370328 75 + 10161646 CGATTGTATGATCTACAACGTGCAGATGGTATGAAAGGGCCCCAGCCATTTACAACTTTCACCGAAGCCTGACGG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1401216 75 + 3144229 CGATTGTATGATCTACAATGTGCAGTTTGTATGAAAGGGCCCCAGCCATTAACAACTTTCACCGAAGCCTGACGG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96687755 57 + 98384682 C------------------GAGCCAATTGTATGAAAGGGCCCCAGCCTTTAACAACTTTCACTGAAGCCTGACGG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8224390 57 - 10857215 C------------------GTGCAGATTGTATGAAAGGGCCCCAGCCATTAACAACTTTCACCGAAGCCTGACAG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15616073 57 - 23502949 c------------------gtgcagatTGTATGGAAGGGCCCCAGCCATTAACAACTTTCACCGAAGCCTGATGG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169895471 56 + 171630274 ------------------CATGCCGATTGTGGGAAAGCGCCC-AGCACTTAATAGCGTTCCCAGAAGCCCAGCGG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1300821 56 - 2905041 ------------------CATGCCGATTGTGGGAAAGCACCC-AGCATTTAGCAGCATTCCCAGAAGCCCAGCGG i saiBol1.JH378287 C 0 C 0 s aotNan1.NW_018494782v1 1512247 55 - 1813869 -------------------ATGCCGATTTTGGGAAAGCGCCC-AGCACTTAGCAGCTCTCCCAGAAGCCCAGTGG i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10952962 165 - 12073884 I e cebCap1.NW_016107695v1 1263108 54 - 2164891 I e dasNov3.JH569188 575585 2717 + 760995 I e canFam3.chr1 56173082 6728 + 122678785 I a score=2276478.000000 s hg38.chr6_KB021644v2_alt 110304 259 + 185823 TGCAGTGCCACAAACCTCACTTCCTCTGAGCAACCCCAGGAGTCACATCGCCTGGGCTTGGATTCCCGGCATCACACCTCCGAATGTCCTGGAATCACCTGTTCTGTCTGTGGTATTCAGGACCCTTCCCTGATGATTAAAGATGAA---------CTCCCCTAGAAGAACACACATCTACTGTGC--CTGTTAGACCTCCGTAGAAACCTGCAGCCTTT-AGAGCTGTGTGATGTGTTCACACACGTGTGGTTGTGAGGGAC-ATCTCTCT s panTro5.chr6 173565731 259 + 175400573 TGCAGTGCCGCAAACCTCACTTCCTCTGAGCAACCCCAGGAGTCACATCGCCTGGGCTTGGATTCCCGGCATCACACCTCCGAATGTCCTGGAATCACCTGTTCTGTCTGTGGTATTCAGGACCCTTCCCTGATGATTAAAGATGAA---------CTCCCCTAGAAGAACACACATCTACTGTGC--CTGTTAGACCTCCGTAGAAACCTGCAGCCTTT-AGAGCTGTGTGATGTGTTCACACACGTGTGGTTGTGGGGGAC-GTCTCTCT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171799963 259 + 173848474 TGCAGTGCCGCAAACCTCACTTCCTCTGAGCAACCCCAGGAGTCACATCGCCTGGGCTTGGATTCCCGGCATCACACCTCCGAATGTCCTGGAATCACCTGTTCTGTCTGTGGTATTCAGGACCCTTCCCTGATGATTAAAGATGAA---------CTCCCCTAGAAGAACACACATCTACTGTGC--CTGTTAGACCTCCGTAGAAACTTGCAGCCTTT-AGAGCTGTGTGATGTGTTCACACACGTGTGGTTGTGGGGGAC-GTCTCTCT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11482486 259 - 12463322 TGCAGTGCCGCAAACCTCACTTCCTCTGAGCAACCCCAGGAGTCACATCGCCTGGGCTTGGATTCCCCGCATCACACCTCCGAATGTCTTGGAATCACCTGTTCAGTCTGTGGTATTCAGGACCCTTCCCTGATGATTAAAGATGAA---------CTCCCCTAGAAGAACACACATCTACTGTGC--CTGTTAGACCTCCGTAGAAACCTGCAGCCTTT-AGAGCTGTGTGATGTGTTCACACACGTGTGGTTGTGAGGGAC-GTCTCTCT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156308194 259 + 157873769 TGCAGTGCCGCGAACCTCACTTCCCCTGAGCAACCCCAGGAGTCTCGTCGCCTGGGCTTGGATTCACCGCATCACACCTCCGAATGTCCTGGAATCACCTGTTCTGTCTGTGGTATTCGGGACCCTTCCCTGGTGATTAAGGATGAA---------CTCCCCTAGAAGAACGCACATCTACTGTGC--CTGTCAGACCTCCGTAGAAACCTCCAGCCTTT-AGAGCTGTGTGATGTGTTCACACACGTGTGGTTGTGAGGGAC-ATCTCTCT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170338493 259 + 172585720 TGTGGTCCTGCGAGCCTCAGTTCCTCTGAGAAACCCCAGGAGTCACGTCGCCTGGGCTTGGATTCATCTCATCACATCTCCAAATGTCCTGGAATCACGTGCTCTGTCTGTGGTATTAAGGACCCTTCCCTGATGATTAAAGATGAA---------CTCCCCCAGGAGAACGCACACCTGCTGTGC--CTGCCAGACCTCCGTATAAACCTCCAGCCTGTAAGAGCTGTGT-GTGTGTTCACACACGTGTGGTTGTGAGGGAC-GTCCCTCT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169083876 259 - 170955103 TGTGGTCCCGCGAGCCTCAGTTCCTCTGAGAAACCCCAGGAGTCACGTCGCCTGGGCTTGGATTCATCTCATCACATCTCCAAATGTCCTGGAATCACGTGCTCTGTCTGTGGTATTAAGGACCCTTCCCTGATGATTAAAGATGAA---------CTCCCCCAGGAGAACGCACACCTGCTGTGC--CTGCCAGACCTCCGTATAAACCTCCAGCCTGT-AGAGCTGTGTGGTGTGTTCACACACGTGTGGTTGTGAGGGAC-GTCCCTCT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8370403 259 + 10161646 TGTGGTCCTGCGAGCCTCAGTTCCTCTGAGAAACCCCAGGAGTCACGTCGCCTGGGCTTGGATTCATCTCATCACATCTCCAAATGTCCTGGAATCACGTGCTCTGTCTGTGGTATTAAGGACCCTTCCCTGATGATTAAAGATGAA---------CTCCCCCAGAAGAACGCACACCTGCTGTGC--CTGCCAGACCTCCGTATAAACCTCCAGCCTGT-AGAGCTGTGTGGTGTGTTCACACACGTGTGGTTGTGAGGGAC-GTCCCTCT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1401291 259 + 3144229 TGTGGTCCCGCGAGCCTCAGTTCCTCTGAGAAACCCCAGGAGTCACGTCGCCTGGGCTTGGATTAATCTCATCACATCTCCAAATGTCCTGGAATCACGTGTTCTGTCTGTGGTATTAAGGACCCTTCCCTGATGATTAAAGATGAA---------CTTCCCCAGAGGAACGCACATCTGCTGTGC--CTGTCAGACCTCCGTATAAACCTCCAGCCTGT-AGAGCTGTGTGGTGTGTTCACACACGTGTGGTTGTGAAGGAC-GTCCCTCT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96687812 259 + 98384682 TGTGGTCCCGCAAACCTCAGTTCCTCTGAGAAACCCCAGGAGTCACGTCGCCTGGGCTTGGATTCATCTCATCACATCTCCAAATGTCCTGGAATCACCTGCTCTGTCTGTGGTATTAAGGACCCTTCCCTGATGATTAAAGATGAA---------CTTCCCCAGAAGAACGCACATCTGCTGTGC--CTGTCAGACCTCCGTATAAACCGCCAGCCTGT-AGAGCTGTGTGGTGTGTTCACACACGTGTGGTTGTGAGGGAC-GTCCCACT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8224447 259 - 10857215 TGTGGTCCCGCGAGCCTCAGTTCCTCTGAGAAACCCCAGGAGTCACGTCGCCTGGGCTTGGATTCATCTCATCACATCTCCAAATGTCCTGGAATCACGTGCTCTGTCTGTGGTATTAAGGACCCTTCCCTGATGATTAAAGATGAA---------CTTCCCCAGAGGAACGCACATCTGCTGTGC--CTGTCAGACCTCCGTATAAACCTCCAGCCTGT-AGAGCTGTGTGGTGTGTTCACACTCGTGTGGTTGTGAAGGAC-CTCCCTCT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15616130 259 - 23502949 TGTGGTCCCGCGAACCTCACTTCCTCTGAGAAACCCCAGGAGTCACGTCGCCTGGGCTTGGATTCATCTCATCACATCTCCGAATGTCCTGGAACCACCTACTCTGTCTGTGGTATTAAGGACCCTTCCCTGATGATTAAACATGAA---------CTCCCCCAGAAGAACGCACATCTGCTGTGC--CTGTCAGACCTCCGTATAAACCTCCAGCCTGT-AGAGCTGTGTGGTGTGTTCACACACATGTGGTTGTGAGGGAC-GTCCCTCT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169895527 270 + 171630274 TGGGGTGCTGTGAACCTCACTTTCTCTGAGAAACCCCAGGAGTCGTGTAATCCGGGCTTGGATTCCTCTCACCATATCTACCAATGTCCTGGGATTACCTGTTCTGTCTGTGGTATTCAGGACCCTTCCCTGATGATAGAAGATGAGTCTGCACCGCTGCCCCAGAAGAATGCACGTGTCCTGTGCTGCTGTTAGACCTCCGTGTAAACCTCCAGCTGGT-GGAGCTGTGCAGCTTACTCACACGTGTGTGGGT-TGAGGGACGGTCCCTCT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1300877 267 - 2905041 TGGGGTGCCGCGAACCTCGCTTTCTCTGAGAAACCCCGGGAGTCACATAACCCAGGCTTGGGTTCCTCTCATCACATCTACGAATGTCCTGGGATAACCTGTTCTGTCTGT--TATTCAGAGTCCTTCCCTGATGATAGAAGATGAATCTCCACCGCTCCCCCGGTAGAATGCAAGTCTCCTGTGCTGTTGTTAAACCTTCGTGT-AACCTCCAGCCGGC-AGAGCTGTGT-GTGTGCTCAGACACGCGTGGGTGTGAGGGATGGTCCCTTT i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1263162 271 - 2164891 TGGGGTGCTGCGAACCTCACTTTCTCTGAGAAACCCCAGGAGTCATGTAACCCGGACTTGGATTCCTCTCATCACATCTACGAATGTCCTGGGATAACCTGTTCTGTCTGTGGTATTCAGGATCCTTCCCTGATGATAGAAGATGAATCTCCACCACTCCTCCAGAAGAATGCACATCTCCTGTGCTGTTGTTAAAACTCTGTGTAAACCTCCAGCCCGT-GAAGTTGTGTGGCGTGCTCACACGTGTGTGGGTGTGAGGAACAGTCCCTCT i cebCap1.NW_016107695v1 I 54 C 0 s aotNan1.NW_018494782v1 1512302 271 - 1813869 TGGGGTGCCGCGAACCTCACTTTCTCTGAGAAACCCCAGGAGTCACATAACCCGGGCTTGGATTCCTCTCATCACATATACGAATGTCCTGGGACAACCCATTCTGTCTTTGGTATTCAGGACCCTTCCCTGATGATAGAAGATGAATCTCCACCGCTCCCCCAGAAGAACGCACGTCTCCTGTGCTGTTGTTAAACCTCCGTGTAAACCTCCAGCGGGT-GGAGCCGTGCAGCGTGCTCACACGTGTGTGGGTGTGAGGGACGGTCCCTCT i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10952962 165 - 12073884 I e dasNov3.JH569188 575585 2717 + 760995 I e canFam3.chr1 56173082 6728 + 122678785 I a score=6837494.000000 s hg38.chr6_KB021644v2_alt 110563 783 + 185823 T-CACACG-TGTGGATTGTACCATGG-TCCGTG-TTGGAATTCTCACAGGGAACAAACGAACCGTCA-ATTACCGAGGAAAGGTTTGCTGCGTGGGTAACTCGCCTCTGTGC-AGGAAGAACCCAGAAGCC-CTG---CTCCTGCTGAGGTT-GTAAC-TGGACCTGTAGCTCCCCCGTGGTGCGGTGTGTGTGCGACAGTGTGGGGCGGTAAAGGCTACACGCGTGTGCTCGCGGAACTC-GGGACACAAGCTCCATGAGGCTCGCCGTGGATGGGAGCA--CGGGGCCAGGGCCCAGAGG-AAAAATGGGGA------------GTTAGACAAGGAT--GGGGTGAATCCTGCAGATGCCAGGAGCTGGTCCTTTAGTGAGACTCTGAGGA-AAGCTAAATAGGGCAGAAGCCTAGAA--------------------------------------------------GAGACTCTGCAGGCGTGCCTGG--------------------------------------------GAGAGG-------ACAGTCATAGACT--CTAAGTTACCA---------------------------GAAGGGGATGCAGAGTTGAGGGAGTTGTGA-TTGTTGAAGTACCTCAGAG-----TACATTGAAAGGCAATTTTCATGACATGGTGTGCACTCAATACGGGATGGTTTTAAAGAGGGGAGAAC--CGTCTGCCAGGGGAGCTAAACGTCTGCTTTTTATAAGGAATCTGGCCGTGAGATGTTGGCCTGGGAACGACAGTGCAAGAGGACAGAGGGAGGCCTGGCGGGTGGAGGGCGCTGCCATCTTGGAGATAGAGGG-CAGGTGTGATGAGCACAGCATGAGGCCTGTGGGCTCGAGTCGGGGCCTGAGACGGGGCCTCCTAGACACGGCATCACTGAG-CGAGGGGAGTG s panTro5.chr6 173565990 783 + 175400573 T-CACACG-TGTGGATTGTACCATGG-TCCGTG-TTGGAATTCTCACAGGGAACAAACGAACCGTCA-ATTACAGAGGAAGGGTTTGCTGTGTGGGTAACTCGCCTCTGTGC-AGGAAGAACCCAGAAGCC-CTG---CTCCTGCTGAGGTT-GTAAC-TGGACCTGTGGCTCCTCCGTGGTGCGGTGTGTGTGCGACAGTGTGGGGCGGTAAAGGCTACATGCGTGTGCTCGCGGAACTC-GGGACACAAGCTCCATGAGGCTTGCCATGGATGGGAGCA--CGGGGCCGGGGCCCAGAGG-AAAAATGGGGA------------GTTAGACAAGGAT--GGGGTGAATCCTGTAGATGCCAGGAGCTGGTCCTTTAGTGAGACTCTGAGGA-AAGCTAAATAGGGCAGAAGCCTAGAA--------------------------------------------------GAGACTCTGCAGGCGTGCCTGG--------------------------------------------GAGAGG-------ACAGTCATAGACT--CTAAGTAACCA---------------------------GAAGGGGATGCAGAGTTGAGGGAGTTGTGA-TTGTTGAAGTACCTCAGAG-----TACATTGAAAGGCAATTTTCATGACATGGTATGCACTCAATACGGGATGGTTTTAAAGAGGGGAGAAC--CGTCTGCCAGGAGAGCTAAATGTCTGCTTTTTATAAGGAATCTGGCCGTGAGATGTTGGCCTGGGAACGACAGTGCAAGAGGACAGAGGGAGGCCTGGCGGGTGGAGGGCGCTGCCATCTTGGAGATAGAGGG-CAGGTGTGATGAGCACAGCATGAGGCCTGTGGGCTCGAGTCGGGGCCTGAGACGGGGCCTCCTAGACACAGCATCACTGAG-CGAGGGGAGTG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171800222 783 + 173848474 T-CACACG-TGTGGATTGTACCATGG-TCCGTG-TTGGAATTCTCACAGGGAACAAACGAACCGTCA-ATTACAGAGGAAGGGTTTGCTGTGTGGGTAACTCGCCTCTGTGC-AGGAAGAACCCAGAAGCC-CTG---CTCCTGCTGAGGTT-GTAAC-TGGACCTGTGGCTCCTCCGTGGTGCGGTGTGTGTGCGACAGTGTGGGGCGGTAAAGGCTACATGCGTGTGCTCGCGGAACTC-GGGACACAAGCTCCATGAGGCTCGCCGTGGATGGGAGCA--CGGGGCCGGGGCCCAGAGG-AAAAATGGGGA------------GTTAGACAAGGAT--GGGGTGAATCCTGTAGATGCCAGGAGCTGGTCCTTTAGTGAGACTCTGAGGA-AAGCTAAATAGGGCAGAAGCCTAGAA--------------------------------------------------GAGACTCTGCAGGCGTGCCTGG--------------------------------------------GAGAGG-------ACAGTCATAGACT--CTAAGTAACCA---------------------------GAAGGGGATGCAGAGTTGAGGGAGTTGTGA-TTGTTGAAGTACCTCAGAG-----TACATTGAAAGGCAATTTTCATGACATGGTGTGCACTCAATATGGGATGGTTTTAAAGAGGGGAGAAC--CGTCTGCCAGGAGAGCTAAATGTCTGCTTTTTATAAGGAATCTGGCCGTGAGATGTTGGCCTGGGAACGACAGTGCAAGAGGACAGAGGGAGGCCTGGCGGGTGGAGGGCGCTGCCATCTTGGAGATAGAGGG-CAGGTGTGATGAGCACAGCATGAGGCCTGTGGGCTCGAGTCGGGGCCTGAGACGGGGCCTCCTAGACACAGCATCACTGAG-CGAGGGGAGTG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11482745 783 - 12463322 T-CACATG-TGTGGATTGTACCATGG-TCCGTG-TTGGAATTCTCACAGGGAACAAACAAACCGTCA-ATTACCGAGGAAGGGTTTGCTGTGTGGGTAACTCGCCTTTGTGC-AGGAAGAACCCAGAAGCC-CTG---CTCCTGCTGAGGTT-GT-AC-TGGACCTCTGGCTCCCCCATGGTGCGGTGTGTGTGTGACAGTGTGGGGCGGTAAAGGCTACACGCGTGTGCTCGCGGAACTCGGGGACACAAGCTCCATGAGGCTCGCCGTGGATGGGAGCA--CGGGGCCGGGGCCCAGAGA-AAAAATGGGGA------------GTTAGACAAGGAT-GGGGGTGAATCCTGCAGATGCCAGGAGCTGGTCCTTTAGTGAGACTCTGAGGA-AAGCTAAATAGGGCAGAAGCCTAGAA--------------------------------------------------GAGACTCCACAGGCATGCCTGG--------------------------------------------GAGAGG-------ACAGTTATAGACT--CTAAGTAACCA---------------------------GAAGGGGATGCAGAGTTGAGGGAGTTGTGA-TTGTTGAAGTACCTCAGAG-----TACATTGAAAGGCAATTTTCATGACATTGTGTGCACTCAATACGGGATGGTTTTAAAGAGGGGAGAA---CGTCTGCCAGGGGAGCTAAACGTCTGCTTTTTATAAGGAATCTGGCTGTGAGATGTTGGCCTGGGAACGACAGTGCAAGAGGACAGAGGGAGGCCTGGCGGGTGGAGGGCGCTGCCGTCTTGGAGATAGAGGG-CAGGTGTGATGAGCACAGCATGAGGCCTGTGGGCTCGAGTCGGGGCCTGAGACGGGGCCTCCTAGACACGGCATCACTGAG-CGAGGGGAGTG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156308453 828 + 157873769 T-CACACA-TGTGGATTGTACCATGG-TCCGTG-TTGGAATTCTCACAGGGAACAAACGAACGGTCA-ATTACCTAGGAAGGGTTTGCTGTGTGGGCAACTCACCTCGGTGC-GGGAGGAACCCAGAAGCC-CTG---ATTCTGCTGGGGTT-GTAAC-TGGACCTGTGGCTCCCCCGTGGTGCG--GTGTGTGCGACAGTGTGGGGAGGTAAAGGCTACATATGTGTGCTCGAGGAACTCAGGGACACAAGCTCCATGAGGCTCGCTGTGGACGGGAGCA--CGGGGCCAGGGCCCAGAGA-AAAAACGAGGA------------GTTAGACAAGGATGGGGGGTGAATCCTGCAGATGCCAGGAGCTGGTCCTTTGGTGAGACTCTGAGGA-AAGCTGAATAGGGCAGAAGCCTCGGA--------------------------------------------------GAGACTCCACAGGCGTGCCCGGGAGAGGACAGTCACAGACTCTAAGTGACCCACAGGCGTGCCCGGGAGAGG-------ACAGTCACAGACT--CTAAGTGACCA---------------------------GAGGAGGATGCAGAGTTGAGGGAGTTGTGG-TTGTTGAAGTACCTCAGAG-----TTCATGGAAAGGCAATTTTCATGACGTTGTGTGTACTCAATACGGGATGGTTTTAAAGAGGGGAGAAC--CGTCTGCCAGGTGAGCTAAACATCTGCTTTTTATAAGGAATCTGGCCATGAGATGTTGGCCTGGGAATGGCAGTGCAAGAGGACAGAGGGAGGCCTGATGGGTGGAGGGCACTGCAATCTTGGAGACAGAGGG-CAGGTGTGATGAGCAGAGCGTGAGCCCTGTGGACTTGAGTCAGGGCCTGAGACGGGGCCTCCTAGACACGGCATCACTGAG-CGGGGGGAGTG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170338752 787 + 172585720 TCCACAGG-TGGGGTCTGTGCCACGGCTCCGTGTTTGCAGTTCTCACAGGGAACAAACGAACCGTCGCATTACCT-GGAAGCGTTTGCTGTGTGGGC-ACTCGTCTCGGTGC-GGGAAGAACCGCGAAACC-CTG---CTCCTGCTGAGGCTGGTAACTTGGACCTGTGGCTCCCCCGTGGTGTGGTGCATGTGCGACAGTGTGGGGTGGTAAAGGCTACACGCGTGTGCTCGTGGAACTCAGAGACACAAGCTCCATGAGGCTTGCCATGGATGGGAGCA--CGGAGCCGGGGCCCAGAGG-AAAAATGGGGA------------GTTAGACAAGGAC-AGGGGTGAATCCTGCAGACGCCAGGAGCTGGTCCTTTGGTGAGACTCTTAGGA-AAGCTGAATAGGGCAGAAGCTTAG----------------------------------------------------GAGACTCCACAGGCGTGCCTGG--------------------------------------------GAGAGG-------ATAGTCATAGACT--CCAGGTAACCA---------------------------GAGGGGGATGCCTAGTTGAGGGAATTGTGA-TTGTTGAAGTACCTCAGAG-----TATGCTGAAAGGCAATTTTCATGACATTGTGTGCACTCAATACGGGATGGTTTTAAAGAGGGGAGAAC--CGTCTGCCAGGTGAGCTAAACATCTGCTTTTTATAAGGAATCTGGCCGTGAGATGTTGGCCCGTGAACGGCAGTGCAAGAGGGCAGAGGAAGGCCTGGACGGTGGAGAGTGCTGCAATCTTGGAGACAGAGGG-CAGGTGTGATGAGCACAGTGTGAGGCCTGTGGACTTCAGTCGGGGCCTGAGACAGGGCCTCCTAGACACGGCGTCACTGAG-CGGGGAAAGTG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169084135 784 - 170955103 T-CACAGG-TGCGGACTGTGCCATGG-TCCGTG-TTGCAGTTCTCACAGGGAACAAACGAACCGTCG-ATTACCTAGGAAGCGTTTGCTGTGTGGGCAACTCGTCTCGGTGCAGGGAAGAACCCGGAAACC-CTG---CTCCTGCTGAGGCT-GTAAC-TGGACCTGTGGCTCCCCCGTGGTGTGGTGCATGTGCGACAGTGTGGGGTGGTAAAGGCTACACGCGTGTGCTCGTGGAACTCGGAGACACAAGCTCCATGAGGCTTGCCATGGATGGGAGCA--CGGAGCCGGGGCCCAGAGG-AAAAATGGGGA------------GTTAGACAAGGAT-AGGGGTGAATCCTGCAGACGCCAGGAGCTGGTCCTTTGGTGAGACTCTTAGGA-AAGCTGAATAGGGCAGAAGCTTAG----------------------------------------------------GAGACTCCACAGGCGTGCCTGG--------------------------------------------GAGAGG-------ATAGTCATAGACT--CCAGGTAACCA---------------------------GAGGGGGATGCCGAGTTGAGGGAATTGTGA-TTGTTGAAGTACCTCAGAG-----TATGCTGAAAGGCAATTTTCATGACATTGTGTGCACTCAATACGGGATGGTTTTAAAGAGGGGAGAAC--CGTCTGCCAGGTGAGCTAAACATCTGCTTTTTGTAAGGAATCTGGCCGTGAGATGTTGGCCCGTGAACGGCAGTGCAAGAGGGCAGAGGAAGGCCTGGACGGTGGAGAGTGCTGCAATCTTGGAGACAGAGGG-CAGGTGTGATGAGCACAGTGTGAGGCCTGTGGACTTCAGTCGGGGCCTGAGACAGGGCCTCCTAGACACGGCGTCACTGAG-CGGGGAAAGTG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8370662 784 + 10161646 T-CACAGG-TGCGGACTGTGCCACGG-TCCGTG-TTGCAGTTCTCACAGGGAACAAACGAACCGTCG-ATTACCTAGGAAGCGTTTGCTGTGTGGGCAACTCGTCTCGGTTCAGGGAAGAACCCGGAAACC-CTG---CTCCTGCTGAGGCT-GTAAC-TGGACCTGTGGCTCCCCCGTGGTGTGGTGCATGTGCGACAGTGTGGGGTGGTAAAGGCTACACGCGTGTGCTCGTGGAACTCGGAGACACAAGCTCCATGAGGCTTGCCATGGATGGGAGCA--CGGAGCCGGGGCCCAGAGG-AAAAATGGGGA------------GTTAGACAAGGAT-AGGGGTGAATCCTGCAGACGCCAGGAGCTGGTCCTTTGGTGAGACTCTTAGGA-AAGCTGAATAGGGCAGAAGCTTAG----------------------------------------------------GAGACTCCACAGGCGTGCCTGG--------------------------------------------GAGAGG-------ATAGTCATAGACT--CCAGGTAACCA---------------------------GAGGGGGATGCCGAGTTGAGGGAATTGTGA-TTGTTGAAGTACCTCAGAG-----TATGCTGAAAGGCAATTTTCATGACATTGTGTGCACTCAATACGGGATGGTTTTAAAGAGGGGAGAAC--CGTCTGCCAGGTGAGCTAAACATCTGCTTTTTGTAAGGAATCTGGCCGTGAGATGTTGGCCCGTGAACGGCAGTGCAAGAGGGCAGAGGAAGGCCTGGACGGTGGAGAGTGCTGCAATCTTGGAGACAGAGGG-CAGGTGTGATGAGCACAGTGTGAGGCCTGTGGACTTCAGTCGGGGCCTGAGACAGGGCCTCCTAGACACGGCGTCACTGAG-CGGGGAAAGTG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1401550 783 + 3144229 T-CACATG-TGTGGACTGTGCCACGG-TCCGTG-TTGCAGTTCTCACGGGGAACAAACGAACCGTTA-ATTACCTAGGAAGCGTTTGCTGTGTGGGCAACTCGTCTCGGTGCAGGGAAGAATCCAGAAGCC-CT----CTCCTGCTGAGGCT-GTAAC-TGGACCTGTGGCTCCCCCGTGGCGTGGTGCATGTGCGACAGTGTGGGGTGGTAAAGACTACACGCGTGTGCTCGTGGAACTCGGGGACACAAGCTCCATGAGGCTTGCCATGGATGGGAGCA--CGGAGCCGGGGCCCAGAGG-AAAAATGGGGA------------GTTAGACAAGGAT-AGGGGTGAATCCTGCAGACGCCAGGAGCTGGTCCTTTGGTGAGACTCTTAGGA-AAGCTGAATAGGGCAGAAGCTTAG----------------------------------------------------GAGACTCCACAGGCGTGCCTGG--------------------------------------------GAGAGG-------ATAGTCATAGACT--CCAGGTAACCC---------------------------GAGGGGGATGCCGAGTTGAGGGAATTGTGA-TTGTTGAAGTACCTCAGAG-----TATGCTGAAAGGCAATTTTCATGACATTGTGTGCACTCAATACGGGATGGTTTTAAAGAGGGGAGAAC--CGACTGCCAGGTGAGCTAAACATCTGTTTTTTGTAAGGAATCTGGCCGTGAGATGTTGGCCCGGGAACAGCAGTGCAAGAGGGCAGAGGAAGGCCTGGACGGTGGAGGGTGCTGCAATCTTGGAGACAGAGGG-CAGGTGTGATGAGCGCAGCGTGAGGCCTGTGAGCTTCAGTCGGGGCCTGAGACAGGGCCTCCTAGACACGGCGTCACTGAG-CGGGGAAAGTG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96688071 784 + 98384682 T-CACAGG-TGTGGACTGTGCCACAG-TCCGTG-TTGCAGTTCTCACAGGGAACAAACGAACTGTCA-ATTACCTAGGAAGCGTTTGCTGTGTGGGCAACTCGTCTCGGTGCAGGGAAGAACCCAGAAGCC-CTG---CTCCTGCTGAGGCT-GTAAC-TGGACCTGTGGCTCCCCCGTAGTTTGGTGCATGTGCGACAGCGTGGGGTGGTAAAGGTTACATGCGTGTGCTCGTGGAACTCAGGGACACAAGCTTCATGAGGCTTGCCCTGGATGGGAGCA--CGGAGCCATGGCCCAGAGG-AAAAATGGGGA------------GTTAGACAAGGAT-AGGGGTGAATCCTGCAGACGCCAGGAGCTGCTCCTTTGGTGAGACTCTTAGGA-AAGCTGAATAGGGCAGAAGCTTAG----------------------------------------------------GAGACTCCACAGGCCTGCCTGG--------------------------------------------GAGAGG-------ATAGTCATAGACT--CCAGGTAACCA---------------------------GAGGGGGATGCCGAGTTGAGGAAGTTGTGA-TTGTTGAAGTACCTCAGAG-----TATGCTGAAAGGCAATTTTCATGACATTGTGTGCACCCAACACAGGATGGTTTTAAAGAGGGGAGAAC--CGACTGCCAGGTGAGCTAAACATCTGCTTTTTGTAAGGAATCTGGCCGTGAGATGTTGGCCCAGGAACGGCAGTGCAAGAGGGCAGAGGAAGGCCTGGACGGTGGAGGGTGCTGCAATCTTGGAGACAGAGGG-CAGGTGTGATGAGCGCAGCGTGAGGCCTGTGGGCTTCAGTCGGGGCCTGAGACAGGGCCTCCTAGACACGGCATCACTGAG-CAGGGGAAGTG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8224706 763 - 10857215 T-CACATG-TGTGGACTGTGCCGCGG-TCCGTG-TTGCAGTTCTCACAGGGAACAAACGAACCGTCG-ATTACCTAGGAAGCGTTTGCTGTGTGGGCAACTCGTCTCGGTGTGGGGAAGAATCCAGAAACC-CT----CTCCTGCTGAGGCT-GTAAC-TGGACCTGTGGCTCCCCTGTGGCGTGGTGCATGTGCGACAGTGTGGGGTGGTAAAGGCTGCACGCGTGTGCTCGTGGAACTCGGGGACACAAGCTCCATGAGGCTTGCCATGGATGGGAGCA--CGGAGCCGGGGCCTAGAGG-AAAAACGCGGA------------GTTAGACAAGGAT-AGGGGTGAATCCTGCAGACGCCAGGAGCTGGTCCTTTGGTGAGACTCTTAGGA-AAGCTGAATAGGGCAGAAGCTTAG----------------------------------------------------GAGACTCCACAGGCGTGCCCGG--------------------------------------------GAGAGG-------ACAGTCATAGACT--CCAGGTAACCA---------------------------GAGGGGGAAGCCGAGTTGAGGGAGTTGTGA-TTGTTGAAGTACCTCAGAG-----TATGCTGAAAGGCAATTTTCATGACATTGTGTGCACTCAATACGGGATGGTTTTAAAGAGGGGAGAAC--TGTCTGCCAGGTGAGCTAAACATCTGCTTTTTGTAAGGAATCTGGCCATGAGATGTTGGCCCGGGAACGGCAGTGCAAGAGGGCAGAGGAAGGCCTGGACGGTGGAGGGTGCTGCAATCTTGGAGACAGAGGG-CAGGTGTGATGAGCACAGCGTGA--------------------GGCCTGAGACAGGGCCTCCTAGACACGGCATCACTGAG-CGGGGAAAGTG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15616389 823 - 23502949 T-CACATG-TGTGGACTGTGCCACGG-TCCACG-TTTCAGTTCTCACAGGGAACAAACGAACCGTCA-ATTACCTAGGAAGCGTTTGCTGTGTGGGCAACTCATCTTGGTGCAGGGAAGAACCCAGAAGCC-CTG---CGCCCGCTGAGGCT-GTAAC-TGGACCTGTGGCTCCCCCGTGGTTTGGTGCATGTGTGACAGTGTGGGGTGGTAAAGGCTACACGCGTGTGCTCGTGGAACTCGGGGACACAAGCTCCATGAGGCTTGCCATGGATGGGAGCA--CGGAGCCAGGGCCCAGAGG-AAAAATGGGGA------------GTTAGACAAGGAT-AGGGGTGAATCCTGCAGACGCCAGGAGCTGGTCCTTTGGTGAGACTCTTAGGA-AAGCTGAATAGGGCAGAAGCTTAGGAGACTCCACAGGTGTGCCTGGGCGAGGATAGCCATAGACTCCAGGTAACCAGAGACTCCACAGGCATGCCTGG--------------------------------------------GCGAGG-------ATAGTCATAGACT--CCAGGTAACCA---------------------------GAGGCGGATGCCGAGCTGAGGGAGTTGTGA-TAGTTGAAGTACCTCAGAG-----TATGTTGAAAGGCAATTTTCATGACATTGTGTGCAGTCAATACGGGATGGTTTTAAAGAGGGGAGAAC--CATCTGCCAGGTGAGCTAAACATCTGCTTTTTGTAAGGA-------------ATGTTGGCCCGGGAATGGCAGTGCAAGAGGGCAGAGGAAGGCCTGGACGGTGGAGGGCGCTGCAATCTTGGAGACAGAGGG-CAGGTGTGATGAGCTCAGCGTGAGGCCTATGGGCTTGAGTCGGGGCCTGAGACAGGGCCTCGTAGACACAGCATCACTGAG-CGGGGGAAGTG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169895797 795 + 171630274 T-CACACG-TGTGGATCGTACCACGG-TCCCTG-TTGGAATTCTCATGGG----AAACAAACCGTCA-ATTACCTGGGAAGGGTCTGCTGTATGGGCAACTTGCCTTTGTGCAGAGAAGCACCCGGAAGCC-CTG---CTCCTGCTGAGATT-GTAAC-TGGACCCGTGTCTCCCCTGTGGTGCCATGTGT--GTGACAGTGTGGAGTGGTGAAGGCTACATGCGTGTGTCCACAGAACTCAGGGACACACACTCCATGAGGCTCGCTACAGACGGGAGCA--CGGGGCC-GGGCCCATAGGAAAAAATGAGGA------------GTCAGACGAGGATGAGGAGTGAATCCTGCAGATGCCAGGAGCAGGTCCTTTGGGGAGACTCTGAGGA-AAGCTGAGTAGGGC---AGTTTAGGG--------------------------------------------------GAGATTCCACAGGCATGTGTG---------------------------------------------GAGAGG-------ATAGTCACTGAGTGGCCATGTAAGTACATTTCCCGCTCAGTGGCTCTGAGCGGGAGGGGGATGCAGACTGGAGAGCACCGTGA-TTGTTGAAGTCCCTCAGAG-----GATGCTGAAAGGCAATTTCCACGACATCATGTGCACTCAATACGGGATGG-TTTAAAGAGGGCAGAAC--CACCTGTCCTGTGAGCTAAACCTCTACTTATTGGAAGAAAGCTGACTGTGAGATGGTGGCCCAGGAATGGCAGTGCAGGAGGAAAGAGGGAAGCCTGGAGGGTGGAGGGCACTGCCATCT------TGGAGGGGCAGTTGCAATGAGCACAGTGTGAGGTCCATGGGCTTGAGGCAGGCCCTGAGATGGGGCCTCCTAGACACGGCATCTCTGGG-GTGGGG----- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1301144 755 - 2905041 T-CACACA-TGTGGATCGTACCATGG-TCCCTG-TTGGAATTCTCA--GG----AAACAAATCATCA-ATTACCTGGGAAGGGTCTGCTGTGTGGGCAACTCACCTTGGTGCAGAGAAGCACCCGGAAGCC-CTG---CTCCTGCCGAGATT-GTAAA-TGGACCCGTGGCTCCCCCGTGGTGCCGTGTGTGGGCGACAGGGTGGAGCGGTGAAGCCTACATGCGTGTGCCTGCAGAACTCA--GACACACACTCCATGAGGCTTGCTACAGATGGGAACA--CGGGGCCAGGGCCCAGAGAAAAAAAAAATGA------------GTCAGACAAGGATGGGGCGTGAATCCTGCAGATGCCAGGAGCAGGTCCTTTGGGGAGACTCCACGGA-AAGCTGAATAGGGCAGAAGTTTAGGG--------------------------------------------------GAGATTCCA-AGGCGTGTGTG---------------------------------------------GAGAGG-------ACAGCCACTGACT--CCGAGTAAGCA---------------------------GAGGAGGATGTGGGGTGGAGGGCTCTGTGG-CTGCTGAAGTCCCTCAGAG-----GATGCTGAAAAGCCATTTCCATGGTGTTGTGTGCACTCAGTACAGGATGG-TTTAAAGAGGGCAGAAC--TATCTGTCCGGTGAGCTAAACCTCTGCTTATTGGAAGAAAGCTGACTGTGAGATGGGGGCCCC--AACGGCAGTGCAGGAGGCCAG-GGGAGGCCTGGAGGGTGTGGAGA----------------CGGAGGGGCAGTCACAGCGAGCACAGTGTGAGGCCTGTGGGCTTGAGGCGGGCCCTGAGATGCGGCCTCCTAGACACGGTGTCACTGGGCTTGGGG----- i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1263433 779 - 2164891 T-CACACA-TGTGGATTGTACCATAG-TCCCTG-TTGGAATTCTCACAGG----AAACAAATCATCA-ATTACCTGGGAAGGGTCTGCTGTGTGGGCAACTCGCCTTGGTGCAGAGAAGCACCCGGAATCC-CTG---CTCCTGCTAAGACT-GTAAC-TGGACCCGTGGCTCCCCCGTGGTGCCGTGTGTGGGCGACAGTGTAGAGTGGTGAAGGCTACATGCGTGTGCCCGCAGAACTCAGGGACACACACTCCATGAGGCTCGCTACAGACGGGAACA--CGGGGCCAGGGCCCAGAGAAAAAAATGAGGA------------GTCAGACAAGGATGGGGTGTGAATCCAGCAGATGCCAGGAGCAGGTCCTTTGGGGAGACTC--AGGA-AAGCTGAATAGGGCAGAAGTTTAGGG--------------------------------------------------GAGATTCCACAGGCGTGTGTG---------------------------------------------GAGAGG-------ACAGTCACTGACT----GAGTAGCCA---------------------------GAGGGGGATGCAGAGCGGAGGGCACTGTGA-TTGTTGAAGTCCCTCAGAG-----GATTCCGAAAGGCAATTTCCACGACATTGTGTGTACTCAATACAGGATGG-TTTAAAGAGGGCAGAGC--TATCTGTCCGGTGAGCTAAACCTCTGCTTATTGGAAGAAAGCTGACTGTGAGATGGGGGCCCAGGAACGGCAGTGCAGGAGGACAGAGGGAGGCCTGGTGGGTGGAGGGCACTGCCATCTTGGAGACGGAGGGACAGTTGCAACGAGCACAGTGTGAGGCCTGTGGGCTTGAGGTGGGCCCTGAGATGGGGCCTCCTAGACACGGCATCACTGGG-GTGGGGGAGTG i cebCap1.NW_016107695v1 C 0 I 72 s aotNan1.NW_018494782v1 1512573 780 - 1813869 T-CACACG-TGTGGATCGTACCACGG-TCCCTG-TTGGAATTCTCATAGG----AAACAAATCGTCA-ATTACCTGGGAAGGGTCTGCTGTGTGGACAACTCGCCTTGGTGCAGAGAAGCACCCAGAAGCC-CTG---CTCCTGCTGAGATT-GTAAC-TGGACCCTTGGCTCCCCCGTGGTGCCATGTGTGTGTGACAGTGTGGAGTGGTGAAGGCTACATGCGTGTGCCTGCAGAACTCAGGGACACACTCTCCATGAGGTTCGCTACGGATGGGAGCA--CGGAGCCTGGGCCCAGAGAAAAAAATGAGGA------------GTCAGACAAGGATGGGGCGTGAATCCTGCAGATGCCAGGAGCAGGTCCTTTGGGGAGACTCTGAGGA-AAGTTGAATAGGGCAGAAGTTTAGGG--------------------------------------------------AAGATTCCACAGGCCTGTGTG---------------------------------------------GAGAGG-------TTAGTCACTGACT----GAGTAACCA---------------------------GAGGGGGATGCGGAGTGGAGGGCACCGTGA-TTGTTGAAGTCCCTCAGAG-----GATGCTGAAAGGCAATTTCCACGACATCGTGTGCACTCAATACAGGATGG-TTTAAAGAGGGAAGAAC--TATCTGTCCGGTAAGCTAACCCTCTGCTTACTGGAAGAAAGCTGACTGTGAGACGGTGGCCCAGGAACGGCAGTGCAGGGCGACAGAGGGAGGCCTGGAGGGCAGAGGGCACTGCCATCTTGGAGACGGAGGGGCAGTTGCAACGAGTACAGTGTGAGGCC-GTGGGCTTGAGGCGGGCCCTGAGATGGGGCCTCCTAGACACGGCATCACTGGG-GTGGGGGAGTG i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10953127 744 - 12073884 T-CACACACCGGGGTCTGCGTGGTGG-CCCAGC-TCTGTGCTCTCACAGGAA--GGTGTGACCAGGA-CTGACCCAGGAAGGGTTTGCTCAGTGGGTAAGTTGCCTGGATGC-AGGAAACATGCAGACACCACTGGAAATCCTGCT----CT-GTGTC--AGACATGCA-CCACCCTGCAGAGTCCCACTCGTGTGGCAGCATGAGGGGCTCAGGG---CACATGTCTACTACTGGCCCCGGGAG----------CAGCAGGCTGGGTGCAGATAGGAGGAGGCTGAGCTGGGTCTGAGGGA------TGGGGAGCAGGTGGCTGGGTCAGGCATGGAT----GGCAGATGCTGCAGG-GCACAGAGCTGCTCTGGCAGGGAGGCCCTATGGAGAGGCCAAGTAGGGCAGAGGTCTA-----------------------------------------------------GAGATGTCAT--GTCTGCTGGG--------------------------------------------GCAGGGCAGGGTAACATGCATGGTGT--CCACACAGCCA------------------------------GCGCATTTAGAACTGAGGGAACAGTGAGCTATGGAAGCCCCACACAGGGGGACAGGTTGAGAGGCAAGTTC---AAGACTGTGTGCTGCTGATATGGGGTGGTCTTAAAGAAGGAAGAGCAGAGTCTA-CAGGGGAGCTGGAAGTCAA--TTTCAGTATTAACCTGA-TGTGAGCTGGTGGCCCCAG-ATGGCAGC---------------AGGGCCTGGAAGCAGGTGGATGGGGGCGTCTGGGAGACTAAAGG-CAGAGTTAAGGAGCAGAG---GAGGC----AGGGGTGAGCTGGGGCCTGCAAAGGGACCCC--AGGCCTGGGCTTGTTGAA-GTAAG------ i otoGar3.GL873575 I 165 C 0 e dasNov3.JH569188 575585 2717 + 760995 I e canFam3.chr1 56173082 6728 + 122678785 I a score=370414.000000 s hg38.chr6_KB021644v2_alt 111346 53 + 185823 GCTGGACAGGACAGTGACGAATTTCCTCTCAATGGTTCCGCAGCCTTTGCCTC s panTro5.chr6 173566773 53 + 175400573 GCTGGACAGGACAGTGACGAATTTCCTCTCAATGCTTCCGCAGCCTTTGCCTC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171801005 53 + 173848474 GCTGGACAGGACAGTGACGAATTTCCTCTCAATGCTTCCGCAGCCTTTGCCTC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11483528 53 - 12463322 GCTGGACAGGACAGTGACGAATTTCCTCTCAATGGTTCCGCAGCCTTTGCCTC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156309281 53 + 157873769 GCTGGACAGGACAGTGACGAATTTCCTCTCAATGGTTCCGCAGCCTTTGCCTC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170339539 53 + 172585720 GCTGGACAGGACAGTGACGAATTTCTGCTCAATGGTTCCACAGCCTTTGCCTC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169084919 53 - 170955103 GCTGGACAGGACAGTGACGAATTTCCGATCAATGGTTCCACAGCCTTTGCCTC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8371446 53 + 10161646 GCTGGACAGGACAGTGACGAATTTCCGCTCAATGGTTCCACAGCCTTTGCCTC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1402333 53 + 3144229 GCTGGACAGGACAGTGACGAATTTCCGCTCAATGGTTCTACAGCCTTTGCCTC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96688855 53 + 98384682 GCTGGACAGGACAGTGACGAATTTCCGCTCAATGGTTCCACAGCCTTTGCCTC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8225469 53 - 10857215 GCTGGACAGGACAGTGACGAATTTCCGCTCAATGGTTCCACAGCCTTTGCCTC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15617212 53 - 23502949 GCTGGACAGGACAGTGACGAATTTCCGCTCAATGGTTCCACAGCCTTTGCCTC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169896592 35 + 171630274 ------------AGTGACAGATTTCCTCCCGA-GATTCAGCAGCACTG----- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1301899 40 - 2905041 ------------AGCGATGGGCTTCCTCCCCA-GGTTCAGCAGCCCTGGCCTC i saiBol1.JH378287 C 0 C 0 s aotNan1.NW_018494782v1 1513353 36 - 1813869 ----------------ACGGATTTCCTCCCCA-GATTCAGCAGCCTTGGCCTC i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10953871 46 - 12073884 -------AGGACAGTGACCGACTGCATTTTGGTGGTTCAGGGGTCTTCACCTG i otoGar3.GL873575 C 0 C 0 e cebCap1.NW_016107695v1 1264212 72 - 2164891 I e dasNov3.JH569188 575585 2717 + 760995 I e canFam3.chr1 56173082 6728 + 122678785 I a score=272371.000000 s hg38.chr6_KB021644v2_alt 111399 38 + 185823 GCCTCACCAGC--GCCAGCCAATAACTGCTCCTCAAGGGG s panTro5.chr6 173566826 38 + 175400573 GCCTCACCAGC--GCCAGCCAATAACTGCTCCTCAAGGGG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171801058 38 + 173848474 GCCTCACCAGC--GCCAGCCAATAACTGCTCCTCAAGGGG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11483581 38 - 12463322 GCCTCACCAGC--ACCAGCCAATAACTGCTCCTCAAGGGG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156309334 38 + 157873769 GCCTCACCAGC--ACCAGCCAATAACTGCTCCTCAAGGGG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170339592 38 + 172585720 GCCTCACCAGC--GCCAGTCAATAACCGCTCCTTAAGTGG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169084972 38 - 170955103 GCCTCACCAGC--GCCAGTCAATAATCGCTCCTTAAGTGG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8371499 38 + 10161646 GCCTCACCAGC--GCCAGTCAATAATCGCTTCTTAAGTGG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1402386 38 + 3144229 GCCTCACCAGC--GCCAGTCAATAATCACTCCTTAAGTGG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96688908 38 + 98384682 GCCTCACCAGC--GCCAGCCAATAATCGCTCCTCAAGTGG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8225522 38 - 10857215 GCCTCACCAGC--GCCAGTCAATAATCGCTCCTTAAGCGG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15617265 38 - 23502949 ACCTCACCAGT--GCCAGCCAATAATCGCTCCTCAAGTGG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169896627 21 + 171630274 -----------------ATCAATAATCACTCCTTAAAG-- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1301939 36 - 2905041 GCTTCACCAGC--ACCAATCAATAATCACGCCTTAGAG-- i saiBol1.JH378287 C 0 C 0 s aotNan1.NW_018494782v1 1513389 36 - 1813869 GCTTCACCAGC--ACCAGTCAGTAATCACTCCTTAAAG-- i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10953917 37 - 12073884 GCCTCACCAGCT-GCTGGCCAGCTGTGACTCCTCAAGA-- i otoGar3.GL873575 C 0 C 0 s dasNov3.JH569188 578302 38 + 760995 GCTTTACCAGCCAGTGGTCAAATAAGTATGCCTCAAAG-- i dasNov3.JH569188 I 2717 C 0 e cebCap1.NW_016107695v1 1264212 72 - 2164891 I e canFam3.chr1 56173082 6728 + 122678785 I a score=433341.000000 s hg38.chr6_KB021644v2_alt 111437 42 + 185823 CAGACAGGCTTTGCCATGCTGAACAAGC------------------------------AGAAACTTCCCCTC s panTro5.chr6 173566864 42 + 175400573 CAGACAGGCTTTGCCACGCTGAACAAGC------------------------------AGAAACTTCCCCTC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171801096 42 + 173848474 CAGACAGGCTTTGCCACGCTGAACAAGC------------------------------AGAAACTTCCCCTC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11483619 42 - 12463322 CAGACAGGCTTTGCCACGCTGAACAAGC------------------------------AGAAACTTCCCCTC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156309372 42 + 157873769 CAGACAGGCTTTGCCACGCTGAACAAGC------------------------------AGAAACTTACCCTC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170339630 42 + 172585720 CAGACAGGCTTTGCCACGCTGAACAAGC------------------------------AGAAATTTCCCCTC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169085010 42 - 170955103 CAGACAGGCTTTGCCACGCTGAACAAGC------------------------------AGAAATTTCCCCTC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8371537 42 + 10161646 CAGACAGGCTTTGCCACGCTGAACAAGC------------------------------AGAAATTTCCCCTC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1402424 42 + 3144229 CAGACAGGCTTTGCCACGCTGAACAAGC------------------------------AGAAATTTCCCCTC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96688946 42 + 98384682 CAGACAGGCTTTGCCACGCTGAACAAGC------------------------------AGAAACTTCCCCTC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8225560 42 - 10857215 CAGACAGGCTTTGCCACACTGAACAAGC------------------------------AGAAACTTCCCCTC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15617303 42 - 23502949 CAGACAGGCTTTGCCACGCTGAACAAGC------------------------------AGAAACTTCCCCTC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169896648 39 + 171630274 CAGATGGGCTTTG-CACACTGAACAAGC------------------------------AGAAACTTCCC--C i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1301975 41 - 2905041 CAGACAGGCTTTG-CCCACTGAACAAGC------------------------------AGAAACTTCCCCTC i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1264284 41 - 2164891 CAGATAGGCTTTG-CACACTGAACAAGC------------------------------AGAAACTTCCCCTC i cebCap1.NW_016107695v1 I 72 C 0 s aotNan1.NW_018494782v1 1513425 41 - 1813869 CAGATAGGCTCTG-CACACTGAACAAGC------------------------------AGAAACTTCCCCTC i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10953954 69 - 12073884 CCAGCAGGCATTG---CACTGAGCGAGCTAGTTCCCTCCAAGCCTCTGTGTACCTGCAAGACACTCTCTCTC i otoGar3.GL873575 C 0 I 137 s dasNov3.JH569188 578340 38 + 760995 CAATCAGGTGTTG---CTTTGAAAGAGA------------------------------AGA-ACTTCACCTC i dasNov3.JH569188 C 0 C 0 e canFam3.chr1 56173082 6728 + 122678785 I a score=1481770.000000 s hg38.chr6_KB021644v2_alt 111479 183 + 185823 CGAGATGCCCAGA-AGTTTT--------------------------------------------CACCTGCCC--AGGGTGTT-------GCCTGGGGATAA-----TGAGTTCA---------------------------------------------------------CAAAATGCTCTCTTTACAAAAAGCACTGGGCTTGCCTGGAGGGGACAGCTACAGACTGACC----CCTGTGGCTGGATAGC-CCCTTAAGTGTGAAATAAGTAACTTAAGATA---AGATTCTCCATAGTAAGGA s panTro5.chr6 173566906 183 + 175400573 CGAGATGCCCAGA-AGTTTT--------------------------------------------CACCTGCCC--AGGGTGTT-------GCCTGGGGATAA-----TGAGTTCA---------------------------------------------------------CAAAATGCTCTCTTTACAAAAAGCACTGGGCTTGCCTGGAGGGGACAGCTACAGACTGACC----CCTGTGGCTGGATAGC-CCCTTAAGTGTGAAATAAGTAACTTAAGATA---AGATTCTCGATAGTAATGA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171801138 178 + 173848474 CGAGATGCCCAGA-AGTTTT--------------------------------------------CACCTGCCC--AGGGTGTT-------GCCTGGGGATAA-----TGAGTTCA---------------------------------------------------------CAAAATGCTCTCTTTACAAAAAGCACTGGGCTTGCCTGGAGGGGACAGCTACAGACTGACC----CCTGTGGCTGGATAGC-CCCTTAAGTGTGAAATAAGTAACT-----TA---AGATTCTCGATAGTAATGA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11483661 183 - 12463322 CGAGACACCCAGA-AGTTTT--------------------------------------------CACCTGCCC--AGGGTGTT-------GCCTGGGGATAA-----TGAGTTCA---------------------------------------------------------CAAAATGCTCTCTTTACAAAAAGCACTGGGCTTGCCTGGAGGGGACAGCTACAGACTGACC----CCTGTGGCTGGATAGC-CCCTTAAGTGTGAAATAAGTAACTTAAGATA---AGATTCTCGATAGTAATGA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156309414 183 + 157873769 CGAGATGCCCAGA-AGTTTT--------------------------------------------CACCTGCCC--AGGGTGTT-------GCCTGGGGATAA-----TGAGTTCA---------------------------------------------------------CAAAATGCTCTCTTTACAAAAAGCACTGGGCTTGCCTGGAGGGGACAGCTACAGACTGACC----CTTGTGGCTGGATAGC-CCCGTAAGTGTAAAATAAGTTACTTGAGATA---AGATTCTCGGTAGTAATGA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170339672 184 + 172585720 TGAGACGCCCAGA-AGCTTC--------------------------------------------TACCTGCCC--AGGGTGTT-------GCCTGGGGATAA-----CGAGTTCA---------------------------------------------------------CAAAATGCTCTCTTCACAAAAAGCACTGCGCTTGCCTGGAGGGGACAGCTACAGACTGACC----CCTGTGGCTGGATAGCACCCTTAAGTGTGAAATAAGTTACTTAAGATA---CAATTGTTGGTAGTAATGA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169085052 184 - 170955103 TGAGACGCCCAGA-AGCTTC--------------------------------------------TACCTGCCC--AGGGTGTT-------GCCTGGGGATAA-----CGAGTTCA---------------------------------------------------------CAAAATGCTCTCTTCACAAAAAGCACTGAGCTTGCCTGGGGGGGACAGCTACAGACTGACC----CCTGTGGCTGGATAGCACCCTTAAGTGTGAAACAAGTTACTTAAGATA---CAATTGTTGGTAGTAATGA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8371579 184 + 10161646 TGAGACGCCCAGA-AGCTTC--------------------------------------------TACCTGCCC--AGGGTGTT-------GCCTGGGGATAA-----CGAGTTCA---------------------------------------------------------CAAAATGCTCTCTTCACAAAAAGCACTGAGCTTGCCTGGAGGGGACAGCTACAGACTGACC----CCTGTGGCTGGATAGCACCCTTAAGTGTGAAATAAGTTACTTAAGATA---CAATTGTTGGTAGTAATGA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1402466 183 + 3144229 TGAGACGCCCAGA-AGCTTC--------------------------------------------CACCTGCCC--CGGGTGTT-------GCCTGGGGATAA-----CGAGTTCA---------------------------------------------------------CAAAATGCTCTCTTCACAAAAAGCACTGAGCTTGCCTGGAGGGGACAGCTACAGACTGA-C----CCTGTGGCTGGATAGCACCGTTAAGTGTGAAATAAGTTACTTAAGATA---CGATCGTTGGTAGTAATGA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96688988 184 + 98384682 TGAGACGCCCAGA-AGCTTC--------------------------------------------CACCTGCCC--AGGGTGTT-------GCCTGGGGATAA-----CGAGGTCA---------------------------------------------------------CAAAATGCTCTCTTCACAAAAAGCACTACGCTTGCCTGGAGGGGACAGCTACAGACTGACC----CCTGTGGCTGGATAGCACCGTTAAGTGTGAAATAAGTTACCTAAGATA---CAATCGTTGGTAGTAATGA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8225602 184 - 10857215 TGAGACGCCCAGA-AGCTTC--------------------------------------------CACCTGCCC--AGGGTGTT-------GCCTGGGGATAA-----CGAGTTCA---------------------------------------------------------CAAAATGCTCTCTTCACAAAAAGCACTGCGCTTGCCTGGAGCGGACAGCTACAGACTGACC----CCTGTGGCTGGATAGCACCGTTAAGTGTGAAATAAGTTACTTAAGATA---CGATCGTTGGTAGTAATGA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15617345 183 - 23502949 TGAGATGCCCAGA-AGTTTC--------------------------------------------CACCTGCCC--AGGGTGGT-------GCCTGGAGATAA-----CAAGTTCG---------------------------------------------------------CAAAATGCTCTTTTCACAAAAAGCACTGGGCTTGCCTGGAGGGGACAGCTACAGACTGACC----CCTGTGGCTGGATAGCA-CGGTAGGTGTGAAATAAGTTACTTAAGATA---CAATTGTTGGTAGTAATGA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169896687 176 + 171630274 TGAGATGCCCAG-----------------------------------------------------ACCCACCC--AGTGTGTT-------GCCTGTGGATAG-----TGAGTTCA---------------------------------------------------------CAACACGTTCTCTTTACAAAGAACAGTGGCCCCACCTTGGGAGGACTGCTACAGACTCC-C----CCTGTGGCTGGATAGC-GCCCTAAGTGTG-AATAAGTTACTCATGATAAATAAGGTCTTGGTAGTAATGA i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1302016 176 - 2905041 TGAGATGCTCAG-----------------------------------------------------ACCCGACC--AGGGTGTT-------GCCTGGGGATAG-----TGAGTTCA---------------------------------------------------------CAACATGCTCTCTTTACAAAGAACAGTGGCCGCCCCTGGGGAGGACAGCTACGGACCCA-C----CCTGTGGCTGGATAGC-GCCCTAGGTGTG-AACAAGTCACTCATGATAAATAAGGTCTCGGCAGTAATGA i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1264325 176 - 2164891 TGAGATGCCCAG-----------------------------------------------------ACCTGCCC--AGGGTGTT-------GCCTGGGCATAG-----TGAGTTCA---------------------------------------------------------CAACATGCTCTCTTTACAAAGAACAGTGGTCCCACCTGGGGAGAACAGCTACAGACCCA-C----CCTGTGGCTGAATAGT-GCCCTGAGTGTG-AATAAGTTACTTATGATAAATAAGGTCTTGGTAGTAGTGA i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1513466 176 - 1813869 TGAGATGCCCAG-----------------------------------------------------ACCCGCCC--AGGCTGTT-------GCCTGGGGATAG-----TGAGTTCA---------------------------------------------------------GGACATGCTCTCTTTACAAAGAACAGCGGCCCCACCTGGGGAGGACAGCTACAGACTCA-C----CCTGTGGCTGGATAGC-GCCCTCAGTGTG-AATAAGTTACTTATGATAAATAAGGTCTTGGTAGTAATGA i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10954160 295 - 12073884 ccacacacccagatagtttttcttttctctcttttttttaatttttagtagagacaggatcccactcttgttc--aggctggtctcaaactcctgcgctcaa-----gcaattcacccacctcggcctctcagagtactgggatggcaggcgtgagccaccgtgcccagccCCAGCATGCTCTCCTTACAACAAATGGTAGATTCCTCTAGAGAGCAGAGGGACAGGCAGATCAGTGCCTGCCACTTGCCGGA-ACACTGAGTGTG-GCTAAGATCCCACACGTG---AGGCTTCTGATAGCAAGGA i otoGar3.GL873575 I 137 C 0 s dasNov3.JH569188 578378 171 + 760995 TGCACTTTCTAGA-AATTAT--------------------------------------------TACTTACCATGTGGGTGTT-------GC------ATAACCTTTCCATTTTA---------------------------------------------------------AAAAATGCTCTTTTTAAAAAGAATATTGAGTTTGCCTGAAAAG-------------TGACA----ACTGTGGCTCACTTAC-ATATTAAGTGTGAAATAAATTTCTTAAGACA---AGATCCCTAGGTAGAATTA i dasNov3.JH569188 C 0 C 0 e canFam3.chr1 56173082 6728 + 122678785 I a score=6015025.000000 s hg38.chr6_KB021644v2_alt 111662 603 + 185823 AATAATCTACCAACTTTTCTTTCTGAGAAAATATACCTAACTGGGTGGGAACTC----GACATCATGCCTTAACTGGAATTTTTT-CCCCGTACATCCAAATG--TA---TTCTTGAGAGCTTAGGAACTAAGTCATCTCCAAAGGGACTGACAC-GGAGCAAACCATGGT----GATGATCGCTGCATTCGTTATCTCTGA--------ACGTCTCCACGCACCTCATTCTGCTCAGCCTCTTGCTGGACGTGGAGGGGCTTGGCTTTGCTCTCCA-----------GCACTGCGGGG------GTCGTGG--GCACTGGGAAGTCTCTGCCAGGCAGCCTGTGGACGTGCA---G-CTGGCAGAGTCAATTGGATCCGTGAGCTCACAGGAGACCGGCCCCTCCAGGTACATGCCATCTGAAAAC--AACC-TTTTAAGGGCAGGCGGT-GG-CTGAGTCATTGGTACTCAGCCAAGGAGAATGT---GTCCCCACAGCTGTGGCAC--AGCCTCGCTCTGGGCTCACT---CTGTGATATGATGCTGGCTGTGTTCTGTGGAAAGCAACGGTCCCATAAACCATAACTGCTAAGGGCTCTGCCACAGGCCAGCATAAGACATGGGCTGAATGTGCAGTC---------TGAGAGTGGA-GGGAGCAGAT s panTro5.chr6 173567089 603 + 175400573 AATAATCTACCAACTTTTCTTTCTGAGAAAATATACCTAACTGGGTGGGAACTC----GACATCATGCCTTAACTGGAATTTTTT-CCCCGTACATCCAAATG--TA---TTCTTGAGAGCTTAGGAACTAAGTCATCTCCAAAGGGACTGACAC-GGAGCAAAACATGGT----GATGATCGCTGCATTCGTTATCTCTGA--------ACGTCTCCACGCACCTCATTCTGCTCAGCCTCTTGCTGGACGTGGATGGGCTTGGCTTTGCTCTCCA-----------GCACTGCTGGG------GTTGTGG--GCACTGGGAAGTCTCTGCCAGGCAGCCTGTGGACGTGCA---G-CTGGCAGAGTCAATTGGATCCGTGAGCTCACAGGAGACCGGCCCCTCCAGGTACATGCCATCTGAAAAC--AACC-TTTTAAGGGCAGGCGGT-GG-CTGAGTCATTGGTACTCAGCCAAGGAGAATGT---GTCCCCACAGCTGTGGCAC--AGCCTCGCTCTGGGCTCACT---CTGTGATATGATGCTGGCTGTGTTCTGTGGAAAGCAACGGTCCCATAAACCATAACTGCTAAGGGCTCTGCCACAGGCCAGCATAAGACATGGGCTGGATGCACAGTC---------TGAGAGTGGA-GGGAGCAGAT i panTro5.chr6 C 0 I 272 s panPan2.chr6 171801316 603 + 173848474 AATAATCTACCAACTTTTCTTTCTGAGAAAATATACCTAACTGGGTGGGAACTC----GACATCATGCCTTAACTGGAATTTTTT-CCCCGTACATCCAAATG--TA---TTCTTGAGAGCTTAGGAACTAAGTCATCTCCAAAGGGACTGACAC-GGAGCAAAACATGGT----GATGATCGCTGCATTCGTTATCTCTGA--------ACGTCTCCACGCACCTCATTCTGCTCAGCCTCTTGCTGGACGTGGAGGGGCTTGGCTTTGCTCTCCA-----------GCACTGCTGGG------GTCGTGG--GCACTGGGAAGTCTCTGCCAGGCAGCCTGTGGACGCGCA---G-CTGGCAGAGTCAATTGGATCCGTGAGCTCACAGGAGACCGGCCCCTCCAGGTACATGCCATCTGAAAAC--AACC-TTTTAAGGGCAGGCGGT-GG-CTGAGTCATTGGTACTCAGCCAAGGAGAATGT---GTCCCCACAGCTGTGGCAC--AGCCTCGCTCTGGGCTCACT---CTGTGATATGATGCTGGCTGTGTTCTGTGGAAAGCAACGGTCCCATAAACCATAACTGCTAAGGGCTCTGCCACAGGCCAGCATAAGACATGGGCTGGATGCGCAGTC---------TGAGAGTGGA-GGGAGCAGAT i panPan2.chr6 C 0 I 136 s gorGor5.CYUI01015032v1 11483844 601 - 12463322 AATAATCTACCAACTTTTCTTTCTGAGAAAATATACCTAACTGGGTGGGAACTC----GACATCATGCCTTAACTGGAATTTTTT-CCCCGTACATCCAAATG--TA---TTCTTGAGAGCTTAGGAACTAAGTCATCTCCAAAGGGACTGACAC-GGAGCAAACCATGAT----GATGATCGCTGCATTCTTTATCTCTGA--------ATGTCTCCACGCACCTCATTCTGCTCAGCCTCTTGCTGGACGTGGAGGGGCTTGGCTTTGCTCTCCA-----------GCACTGCTGGG------GTCGTGG--GCACTGGGAAGTCTCTGCCAGGCAGCCTGTGGACGTGCA---G-CTGGCAGAGTCAATTGGATCCGTGAGCTCACAGGAGACCGGCCCCTCCAGGTACATGCCATCTGAAAAC--AACC-TTTTAAGGGCAGGCGGT-GG-CTAAGTCATTGGTACTCAGCCAAGGAGAATGT---GTCCCCACAGCTGTGGCAC--AGCCTCGCTCTGGGCTCA-----CTATGATATGATGCTGGCTGTGTTCTGTGGAAAGCAACGGTCCCATAAACCATAACTGCTAAGGGCTCTGCCACGGGCCAGCATAAGACATGGGCTGGATGCGCAGTC---------TGAGAGTGGA-GGGAGCAGAT i gorGor5.CYUI01015032v1 C 0 I 405 s nomLeu3.chr3 156309597 596 + 157873769 CATAATCTACCAACTTTTCTTTCTGAGAAAATATACTTAACCGGGTGGGCACTC----GACATCATGCCTTAACCGGATTTTTTT-CCCTGTACGTCCAAATG--TG---TTTTTGAGAGCTTAGGAACTAAGTCGTCTCCAAAGGGACTGACGG-GGAGCAAAGCATTGT----GATGGTCTCTGCATTCTTTATCTCTGA--------GCATCTCCACGCACCTCATTCTGCTCAGCCTCTTGCTGGCCGTGGAGGGG-TTGGCTTTGCTCTCCA-----------GCACTGCT-GG------GTCGTGG--GCACTGGGAAG--TCTGCCAGGCAGCCTGTGGACATGTA---G-CTGGCAGAGTCAATTGGATCCGTGAGCTCACAGGAGACCGGCCCCTCCAGGTACATGCCA-CTGAAAAC--AACC-TTTTAAGGGCAGGCGGT-GG-CTGAGTTGTTGGTACTCAGCCAAGGAGAATGT---GTCCCCACAGCTGTGGCAT--GGCCTCGCTCTGGGCTCACT---CTGTGGTATGATGCCGGCCATGTTCTGTGGAAAGCATCAGTCCCATAAACCATAACTGCTAAGGGCTCTGCCACGGGCCGGCATAAGAC--GGGCTGGATGCACAGTC---------TGGGAGAGGA-GGGAGCAGAC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170339856 591 + 172585720 AATAATCTGCCGACTTTTCTTTCTGAGAAAATACACCTAACTGGGTGGGAACTC----GACATCACACCTTAAGTGGAATTTTTT-CCCTGTACATCCACATG--TA---TTTTTGAGAGCTTAGGAACTAAGTTGTCTCCAAAGGGACTGACAT-GCAGCAAACCATTGT----GATGATCTCTGCGTTCTTTATCTCTGA--------ACGTCTCCGTGCACCTCATTCTGCTCAGCATCTTGCTGGACGTGGAGCGGCTTGGCTTTGCTCTCCA-----------GCACGGCTGGG------GTCGTGG--GCGCTGGGAAGTCTCTGCCAGGCAGGCTGTGGACGTGCA---G-CTGGCAGAGTCAGTTGGATCCGTGAGATCACAGGAGACTGGCCCCTCCAGGTACATGCCATCTGAAAGCAGAACCTTTTTAAGGGCGGGCAGT-GG-CTGAGTTGTTGGTGCTCAGCCAAGGAGAGTAT---GTCCCCACAGCTGTGGCAC--GGCCTCGCTCTGGGCTCACT---CTATGGCATGACGCCGGCCCTGTTCTGTGGA---------------AAACCATAACTGCTCAGGGCTCTGCCACGGGCCAGCGTAAGGCATGGGCTGGATGCACAGTC---------TGGGAGTGGA-GGGAGCGGAC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169085236 591 - 170955103 AATAATCTGCCGACTTTTCTTTCTGAGAAAATACACCTAACTGGGTGGGAACTC----GACATCACACCTTAAGTGGAATTTTTT-CCCTGTACATCCAAATG--TA---TTTTTGAGAGCTTAGGAACTAAGTTGTCTCCAAAGGGACTGACAT-GGAGCAAACCATTGT----GATGATCTCTGCGTTCTTTATCTCTGA--------ACGTCTCCGTGCACCTCATTCTGCTCAGCCTCTTGCTGGCCGTGGAGGGGCTTGGCTTTGCTCTCCA-----------GCACGGCTGGG------GTCGTGG--GCGCTGGGAAGTCTCTGCCAGGCAGGCTGTGGACGTGCA---G-CTGGCAGAGTCAGTTGGACCCGTGAGATCACAGGAGACTGGCCCCTCCAGGTACATGCCATCTGAAAGCAGAACCTTTTTAAGGGCGGGCAGT-GG-CTGAGTTGTTGGTACTCAGCCAAGGAGAGTAT---GTCCCCACAGCTGTGGCAC--GGCCTCGCTCTGGGCTCACT---CTGTGGCATGATGCCGGCCCTGTTCTGTGGA---------------AAACCATAACTGCTCAGGGCTCTGCCACGGGCCAGCATAAGGCATGGGCTGGATGCACAGTC---------TGGGAGTGGA-GGGAGCGGAC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8371763 591 + 10161646 AATAATCTGCCGACTTTTCTTTCTGAGAAAATACACCTAACTGGGTGGGAACTC----GACATCACACCTTAAGTGGAATTTTTT-CCCTGTACATCCAAATG--TA---TTTTTGAGAGCTTAGCAACTAAGTTGTCTCCAAAGGGACTGACAT-GGAGCAAACCATTGT----GATGATCTCTGCGTTCTTTATCTCTGA--------ACGTCTCCGTGCACCTCATTCTGCTCAGCCTCTTGCTGGACGTGGAGGGGCTTGGCTTTGCTCTCCA-----------GCACGGCTGGG------GTCGTGG--GCGCTGGGAAGTCTCTGCCAGGCAGGCTGTGGACGTGCA---G-CTGGCAGAGTCAGTTGGATCCGTGAGATCACAGGAGACTGGCCCCTCCAGGTACATGCCATCTGAAAGCAGAACCTTTTTAAGGGCGGGCAGT-GG-CTGAGTTGTTGGTACTCAGCCAAGGAGGGTAT---GTCCCCAGAGCTGTGGCAC--GGCCTCGCTCTGGGCTCACT---CTATGGCATGATGCCGGCCCTGTTCTGTGGA---------------AAACCATAACTGCTCAGGGCTCTGCCACGGGCCAGCATAAGGCATGGGCTGGATGCACAGTC---------TGGGAGTGGA-GGGAGCGGAC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1402649 590 + 3144229 AATAATCTGCCAACTTTTCTTTCTGAGAAAATACGCCTAACTGGGTGGGAACTC----GACATTACACCTTAAGTGGAATTTTTT-CCCTGTACATTCAAATG--TA---TTTTTGAGAGCTTAAGAACTAAGTTGTCTCCAAAGGGACTGACAT-GGAGCAAACTATTGT----GATGATCTCTGCGTTCTTTATCTCTGA--------ACGTCTCCGTGCACCTCATTCTGCTCAGCCTCTTGCTGGCCGTGGAGGGGCTTGACTTTGCTCTCCT-----------GCACGGCTGGG------GTCGTGG--GCGCTGGGAAGTCTCTGCCAGGCAGGCTGTGGACGTGCA---G-CTGGCAGAGTCAATTGGATCCGTGAGATCACAGGAGACTGGCCCCTCCAGGTACATGCCATCTGAAAGCAGAACC-TTTTAAAGGCGGGCAGT-GG-CTGAGTTGTTGGTACTCAGCCAAGGAGAGTGT---GTCCCCACAGCTGTGGCAC--GGCCTCGCTCTGGACTCACT---CTATGGCATGACACCGGCCCTGTTCTGTGGA---------------AAACCATAACTACTCAGGGCTCTGCCATGGGCCAGCATAAGGCATGGGCTGGATGCACAGTC---------TGGGAGTGGA-GGGAGCGGAC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96689172 589 + 98384682 AATAATCTGCCGACTTTTCTTTCTGAGAAAATATACCTAACTGGGTGGGAACTC----GACATCATACCTTAAGTGGAATTTTTTCCCCTGTACATCCACATG--TA---TTTTTGAGAGCTTAGGAACTAAGTTGTCTCCAAAGGGACTGACAT-GGAGCAAACCATTGT----GATGATCTCTGTGTTCTTTATCTCTGA--------ACGTCTCCGTGCGCCTCATTCTGCTCAGCCTCTTGCTGGACGTGGAGGGGCTTGGCTTTGCTCTCCA-----------GCATGGCT--G------GTCATGG--GCACTGGGAAGTCTCTGCCAGGCAGGCTGTGGACGTGCA---G-CTGGCAGAGTCAGTTGGATCCGTGAGCGCACAGGAGACTGGCCCCTCCAGGTACATGCCATCTGAAAACGGAACC-TTTTAAGGGCGGGCAGT-GG-CTGAGTTGTTGGTACTCAGCCAAGGAGAGTAT---GTCCCCACAGCTGTGGCAT--GGCCTCGCTCTGGGCTCACT---CTATGGCATGACGCTGGCCCTGTTCTGTGGA---------------AAACCATAACTGCTCAGGGCTCTGCCACGGCCCAGCATAAGGCATGGGCTGGATGCACAGTC---------TGGGAGTGGA-GGGAGCAGAC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8225786 590 - 10857215 AATAATCTGCCAACTTTTCTTTCTGAGAAAATATGCCTAACTGGGTGGGAACTC----GACATCACACCTTAAGTGGAATTTTTT-CCCTGTACATCCAAATG--TA---TTTTTGAGAGCTTAAGAACTAAGTTGTCTCCAAAGGGACTGACAT-GGAGCAAACCATTGT----GATGATCTCTGCGTTCTTTATCTCTGA--------ACGTCTCCGTGCATCTCATTCTGCTCAGCCTCTTGCTGGCTGTGGAGGGGCTTGACTTTGCTCTCCT-----------GCACGGCTGGG------GTCATGG--GCGCTGGGAAGTCTCTGCCAGGCAGGCTGTGGACGTGCA---G-CTGGCAGAGTCAATTGGATCCGTGAGATCACAGGAGACTGGCCCCTCCAGGTACATGCCATCTGAAAGCAGAACC-TTTTAAAGGTGGGCAGT-GG-CTGAGTTGTTGGTACTCAGCCAAGGAGAGTGT---GTCTCCACAGCTGTGGCAC--GGCCTCGCTCTGGGCTCACT---CTATGGCATGATGCCGGCCCTGTTCTATGGA---------------AAACCATAACTGCTCAGGGCTCTGCCACGGGCCAGCATAAGGCATGGGCTGGATGCACAGTC---------TGGGAGTGGA-GGGAGCGGAC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15617528 584 - 23502949 AATAATCTGCCAACTTTTCTTTCTGAGAAAATATACCTAACTGGGTGGGAACTC----GACATCATACCTTAAGTGGAATTTTTT-CCCTGTACATCCAAATG--TA---TTTTTGAGAGCTTAGGAACTAAGTTGTCTCCAAAGGGGCTGACAT-AGAGCAAATCATTGT----GATGATCTCTGCGTTCTTTATCTCTGA--------ACGTCTCCGTGCACTTCATTCTGCTCAGCCTCTGGCTGGACGTGGAG-GGCTTGGCTTTGCTCTCCA-----------GCACGGCTGGG------GTCGTGG--GCGCTGGGAAGTGTCTGCCAGGCAGGCTGTGGACGTGCA---G-CTGGCAGAGTCAACTGGATCCGTGAGCTCACAGGAGACTGGCCCCTCCAGGTACATGCCATCTGAAAGCAGAACC-TTTTAAGGGCAGGCAGT-GG-CTGAGTTGTTGGTACTCAGCCAAGGAGAGTAT---GTCCCCACAGCTGT-------GGCCTCGCTCTGGGCTCACT---CTATGGCATGACGCCGGCCCTGTTCTGTGGA---------------AAACCGGAACTGCTCAGGGCTCTGCCACGGGCCAGCATAAGGCATGGGCTGGATGCACAGTC---------TGGGAGTGGA-GGGAGCAGAC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169896863 589 + 171630274 AATAATCTGCCAACT----TTTCTGAGAAAATTTAC----CTGAGTGGAAACTC----CAGACGACACCTTAACCTGAATTTTTT-TCCTGTACATCCAAATG--TA---TTTTTGAGAGCATAGGAACTAAGTCGTCTCCGAAGGGACTGACGC-GGAGCAAGCCATTGT----GACAATCTCCGCATTCTCTACCTCTGA--------ATGTCTCCATGCATCTCATTCCGCCCAGCCTCTTGCTGAACGTGGGGG---TTGGCTT----CTCTG-----------GCACTGCTGGG------GCCATGG--GCGCTGGGAAGTCGTTGCCAGGCAGACTACGGATGTACA---G-CTGGCAGAATCCATTGGATCAGTGAGCTCACAGGAGGCTGGCCCCTCCAGGTACATGCCGGCT-AAAACAGAAAC-TTTTAAGGGCAGGCAGT-GG-ATGAGTTGTTGGTAGTTGGCCAAGGAGAATGT---GTCCCCACAGCTGTGGCAC--GGCCTTGCTCTGGGCTCACT---CTGTTATATGATGCTGGCCAGGTTCTGTGGGAAGCAGCAGTCCTATAAACCATCACTGCTAATGGCTCCGCCACTGGCCAGCATAAGACCTGGGCTGGATGCACAGTC---------CGGGAGTGGA-GGGACCAGAC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1302192 594 - 2905041 AACACTCTGCCAACT----TTTCTGAGAAAATTTACCTAACTGAGTGGAAATTC----CAGATGATGCCTTCACCTGAATTTTTT-TCCTGTACATCCAAATG--TA---TTTTTGAGAGCACAGGAACTAAGTTGTCTCCAAAGGGACTGGCAT-GGAGCAAGCCATTGC----GACAGTCTCCGCATTCTTTACCTCTGA--------ATGTCTCCACGCATCTCACTCTGCCCAGCCTGCTACTGAACGTGGGGG---TTGGCTTTGTCCTCTG-----------GCAGTGCTGGG------GCCGTGG--GCACTGGGAAGCCGCTGCCAGGCAGCCTACGGATGTACA---G-CTGGCAGAATCGATTGGATCAGTGAGCTCACAGGAGGCTGGCCCCTCCAGGTACATGCCCGCT-AAAACAGAAAC-TTTTAAGGGCAGGCAGT-GG-CTGA---GTTGGCAGCCGGCCAAGGAGAATGT---GTCCCCACAGCTGTGGCAC--GGCCTCGCTCTGGGCTCAGT---CTGTTATACGATGCCGGCCGTGTTCTGTGGAAAGCAGCAGTCCTATAAACCATCACTGCTAATGGCTCTGCCACGGGCCGGCATAAGACGTGGGCTGGATTTGCAGTC---------CCGGAGTGGA-GGGACCAGGC i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1264501 587 - 2164891 AACAATCTGCTAACT----TTTCTGAGAAAATTTTCCTAACTGAGTGGAAACTC----CAGATGACGCCTTAACCTGAATTTTTT-TCCTGTACATCCAAATA--TA---TTTTTGAGAGCATAGGAACTAAGTTGTCTCCAAAGGGACTGA--------CAAGCCATTGT----GACAATCTCCACATTCTTTACCTCTGA--------ATGTCTCCACGCATCTCATTCTGCCCAGCCTCTTGCTGAACGTGGGGG---TTGGCTTTGTTCTCTG-----------GCACTGCTGGG------GCCATGG--GTGCTGGGAAATCGCTGCCAGGCAGCCTATGGACGTACA---G-CTGGCAGAATCAATTGGATCAGTGAGCTCACAGGAGGCTGGTCCCTCCAGGTACATGCCCGCT-AAAACAGGAAC-TTTTAAGGGCAGGCAGT-GG-CTGA---GTTGGTAGTCGGCCAAGGAGAATGT---GTCCCCACAGCTGTGGCAC--AGCCTCGCCCTGGGCTCACT---CTGTTATATGATGCTGGCCACGTTCTGTGGGAAGCAACAGTTCTGTAAACCATCACTGCTAATGGCTCCGCCACGGGCCGGCATAAGACGTGGGCTGGATTCGCAGTC---------TGGGAGTAGA-GGGACCAGAC i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1513642 579 - 1813869 AACAGTCTGCCAACT----TTTCTGAGAAAATTTACCTAACTGAGTGGAAACTC----CAGATGACGCCTTAACCTGAG-TTTTT-TCCTGTACATCCAA--------------------CATAGGAACTAAGTCGTCTCCAAAGGGACTGACAT-GGAGCAAGCCATTGT----GACAGTCT--GCATTCTTTACCTCTGA--------ATGTCTCCACGCATCTCGTTCTGCCCAGCCTCTTGCTGAACGTGGGGG---TTGGCTTTGTTCTCTG-----------GCACTGCTGGG------GCCGTGG--GCACTGGGAAGTCGCTGCCAGGCAGCCTACGGACGTACA---G-CTGGCAGAATCAATTGGATCAGTGAGCTCGCAGGAGGCTGGCCCCTCCAGGTACATGCCCGCT-AAAACAGAAAC-TTTTAAGGGCAGGCAGT-GG-CTGAGTTGTTGGTAGTCGGCCAAGGAGAATGT---GTCCCCACAGCTGTGGCAC--GGCCTCGCTCTGGGCTCACT---CTGTTATATGATGCCGGCCATGTTCTGTGGGAAGCAGCAGTCCTATAAACCATCACTGCTAATGGCTCTGCCACGGGCCGGCATAAGACGTGGGCTGGATGTGCAGTC---------CGGGAGTGGA-GGGACCAGAC i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10954455 567 - 12073884 AATGATTTCTCATTTGTTTTTTCTGAGAAAATTTACACAACCATGTGGGAACTC-CTGAAGATTATGCCTTAGCT--AATTTGTT-TCTCATATAAGCAAATG--TGTATTTTTTGAGAGCTTAGGA--------GTCTCCATCGAGCCACAAGT-AGAGCAAAGCATTTT----TTAAGTCA-------TTTGATCTTTGG--------AGGTCTCCACGCAC------CCGCTTGGACTCTTGTTGGA-ATGGAAGCTCCTG-TTCTGCTCTCTG-----------ATGCTCCTTGGTGGCCAGTGCTGGCCTCGCCGGGATGTCACCGCCATGTGGCGGTTAGCAGCCCA--GG-CTGGCAGACGCAGTGGGGTTAGTGAACTCGTAGGATCCCAGTCCCTCTGGGGACGCG---TCTGCAAGTGGAGCC-TTACAAAGGCAGGTGGTAGG-TGGAGTTGAGGGTACT--GGCCGGGAGAAGGTGCAGCTCCCTCAGCTGCTGTGT--GGACGCATCCCTGGCTAGGT---GTGTGGAAT-------GCATTGTCCTGT------------------AGACTCCAACTGCTATGGGCTCTGTAGCAACACAG--TAAGCCGCCAGGTGGGTGTTCAGTC---------CAGGCGTGGA-CTGGTCAGAG i otoGar3.GL873575 C 0 I 4 s canFam3.chr1 56179810 604 + 122678785 AATAAGGCTTCATCCTGTCTCTCTGAGAAAATTTACCCAGCTGCATAGGAACTTATTAAAGATTATGCCTCACCCCAAATTTCCC-CCTGATAGATAAAAATGCCTA---TTTTTGAAAGTTTAGCAGCAAAATCACTTCCATAGCCGCTTAAGT-AGAAATGACACATTT----TAAAGTCATTATGCT-TTGATCTTGGA--------AGCTTTCCAC-TGCTCAGCTTTGTTCAGCTTTTGGTTGGGCTTGGGAGG-------------CTCTG-----------GTAGCACTTTG------TGTCTGC-----CTGGGAAGTCCCTGCCAGCCCGTGTTCAGCAGTGCA---GACTCCAAGAATCAACTGAATCAGTGAAGTGGTAAGACACTGACCACTCCAGATGCACTCCATCTGAAAG-AGAAAC-TTTCAAAGGCAGATGGCAGG-CTGAGTTGCTGGTAGTTGGCCAAGGAGAACGT---GTTCCGACAGCTATAGTCCCAGGCCTCCCTCTGGGCTCGCTTTCTTATTATAAGATACTTTCCATGTTCTGTGAAATATGCTGATCCTATAAAGTGTAATTGCTAAAGGCCCCACAATGGGTGAAAATACGGCATGGGCTGGA--CTCAGTCCAGGAACCATGAGAGAGTG-AGGAGCAG-- i canFam3.chr1 I 6728 C 0 s dasNov3.JH569188 578549 624 + 760995 AGTAATTTGTCTTCTTTTCTATCTGAGAGAATTTACCCAGCTGAATGGGAAATC-TTGAAGATTATGCCTCATCCTTATATTTTC-CCTTATTGATTCAGATG--TG-GGGTTTTGAGATTTCAGAAGCTCAATCACCAGCATGTGGACTTAAATAAAAGCAAACAATTGTTTTAAAAAGTCTTTATGAT-TTTATCTTTGATGTCCTCCATGTATGCATGTATTTAGCTCTGCTCAGGCTTTTGCCAAGGATGGAATGCTTTGGTTGTGCTCTCCAGATTCTCTCTTGTACTTCTGGT------GCTCTCC--TAACTGGGAAATTACTGCCAGA-AGGAGATTAGCAGGCAAAGG-CTTACAGAATCAATATAGTAAATGAACTCATAAGATACTGACCTCTCCAGGTGCATGGCATCTGAAAATAGAACT-TTTTAAAGGCAGGTGGT-GGATTGAGTTGTTGGTAATAGTCCAAGGAGAATGT---GCTCCAACATCTGTGGTAT--GGCCTCACTTT--------C---TTATTAGAAGATACTTGGAATGTTCAGTGAAGTATACTGGTCCTATAAACTGTAATTGTTAAAGGTTTTGGAATGGGTCATAATAAGACTTGAGCTGGAAGTTCAGTC---------CAGGAGTGGATTGGAG----- i dasNov3.JH569188 C 0 C 0 a score=2275234.000000 s hg38.chr6_KB021644v2_alt 112265 262 + 185823 GGTGAACTGGGAGGAGCCCTGTCAGGCCGCACAGTGAGCGAAGCACTGCTGAGCTGTGAGTGCCCGACGTAGTAAACCGTAAGG-CGAAGCCACCTTGGACTAAAGGAAATGTC--CA-CACCCAG---------CTTGGGGTGGAGTTGCAAACCTCTCCAC-------------TAAGCTGCAAACTCAGCTGTGTGACAAATA----AAACTGACACAGCACTTAGACAGTGTTTCTCTTTCAGGAAGGATTTTATTTCCAGTA--CAATCGAGAAGGAACACTGTA----TCTC s panTro5.chr6 173567964 261 + 175400573 GGTGAACTGGGAGGAGCCCTGTCAGGCCTCACAGTGAGTGAAGCACTGCTCAGCTGTGAGTGCCCGACGTAGTAAACCGTAAGG-CAAAGCCACCTTGGACTGAAGGAAATGTC--CA-CACCCAG---------CTTGGGGTGGAGTTGCAAACCTCTCCAC-------------TAAGCTGCAAACTCA-CTGTGTGACAAATA----AAACTGACACAGCACTTAGACAGTGTTTCTCTTTCAGGAAGGATTTTATTTCCAGTA--CAATTGAGAAGGAACACTGTA----TCTC i panTro5.chr6 I 272 C 0 s panPan2.chr6 171802055 261 + 173848474 GGTGAACTGGGAGGAGCCCTGTCAGGCCTCACAGTGAGTGAAGCACTGCTGAGCTGTGAGTGCCCGACGTAGTAAACCATAAGG-CAAAGCCACCTTGGACTGAAGGAAATGTC--CA-CACCCAG---------CTTGGGGTGGAGTTGCAAACCTCTCCAC-------------TAAGCTGCAAACTCA-CTGTGTGACAAATA----AAACTGACACAGCACTTAGACAGTGTTTCTCTTTCAGGAAGGATTTTATTTCCAGTA--CAATTGAGAAGGAACACTGTA----TCTC i panPan2.chr6 I 136 C 0 s gorGor5.CYUI01015032v1 11484850 261 - 12463322 GGTGAACTGGGAGGAGCCCTGTCAGGCCGCACAGTGAGCGAAGCACTGCTGAGCTGTGAGTGCCCGACGTAGTAAACCGTAAGG-CAAAGCCACCTTGGACTGAAGGAAATGTC--CA-CACCCAG---------CTTGGGGTGGAGTTGCAAACCTCTCCAC-------------TAAGCTGCAAACTCG-CTGTGTGACAAATA----AAACTGACACAGAACTTAGACAGTGTTTCTCTTTCAGAAAGGATTTTATTTCCAGTA--CAATTGAGAAGGAACATTGTA----TCTC i gorGor5.CYUI01015032v1 I 405 C 0 s nomLeu3.chr3 156310193 259 + 157873769 GGTGAATGGGGAGGAGCCCTGTCGGCTGGCACAGT--GCAAAGCACTGCTGAGCTGTGAGCGCCCGACATAGGTAACCATAAGC-CAAAGTCACCTCCGACTAAAGGAAACGTC--CA-CACCCAG---------CTTGGGGTGGACTTGCAAACCTCTCCAC-------------TAAGCTGCAAACTCG-CTGTGTGACAAATA----AAACTGACACAGCACTTAGACAGTGTTTCTCTTTCAGAAAGGATTTTATTTCCAGTA--CAATTGAGAAGGAACATTGTA----TCTC i nomLeu3.chr3 C 0 I 1 s rheMac8.chr4 170340447 263 + 172585720 GGCGAACCGGGAGGAACCT--GCGGCCTGCACGGTGAGCGAAGCACTGCCCAGCTGTGAGTGGCCGACGCAGGTAACCATAAGC-CAAAGCTGCCTCGGACTAAAGGAAACGTC--CA-CACCTAG---------CTTGGGGTGGAGTCACAAACCTCTGCAC-------------TAAACTGAAAACCCG-CTCTGTGACAAATA----AAACTAACACAGTACTTAGACAGTGTTTCTCTTTCAGAAAGGATTCTATTTCCAGTA--CAATTGAGGAGGAACATTGTATCTCTCTC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169085827 263 - 170955103 GGCGAACCGGGAGGAACCT--GCGGCCTGCACGGTGAGCGAAGCACTGCCCAGCTGTGAGTGGCCGACGCAGGTAACCATAAGC-CAAAGCTGCCTCGGACTAAAGGAAACGTC--CA-CACCTAG---------CTTGGGGTGGAGTCACAAACCTCTGCAC-------------TAAACTGAAAACCCG-CTCTGTGACAAATA----AAACTAACACAGTACTTAGACAGTGTTTCTCTTTCAGAAAGGATTCTATTTCCAGTA--CAACTGAGGAGGAACATTGTATCTCTCTC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8372354 263 + 10161646 GGCGAACCGGGAGGAACCT--GCGGCCTGCACGGTGAGCGAAGCACTGCCCAGCTGTGAGTGGCCGACGCAGGTAACCATAAGC-CAAAGCTGCCTCGGACTAAAGGAAACGTC--CA-CACCTAG---------CTTGGGGTGGAGTCACAAACCTCTGCAC-------------TAAACTGAAAACCCG-CTCTGTGACAAATA----AAACTAACACAGTACTTAGACAGTGTTTCTCTTTCAGAAAGGATTCTATTTCCAGTA--CAATTGAGGAGGAACATTGTATCTCTCTC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1403239 259 + 3144229 GGTGAACGGGGAGGAACCT--GCGGCCTGCACGGTGAGCGAAGCACTGCCCAGCTGTGAGTGGCCGACGCAGGTAACCATAAGC-CAAAGCTGCCTCGGACTAAAGGAAACGTC--CA-CACCCAG---------CTTGGGATGGAGTCGCAAACCTCTGCAC-------------TAAACTGAAAACCCG-CTCTGTGACAAATA----AAACTAACACAGTACTTAGACAGTGTTTCTCTTTCAGAAAGGATTCTATTTCCAGTA--CAACTGAGGAGGAACATTGTA----TCTC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96689761 263 + 98384682 GGCGAACCGGGGGGAACCT--GCGGCCCACACGGTGAGTGAAGCAGTGCCCAGCTGTGAGTGACCGACGCAGGTAACCATAAGC-CAAAGCTGCCTTGGACTAAAGGAAACGTC--CA-CACCCAG---------CTTGGGGTGGAGTCGCAAACCTCTGCAC-------------TAAACTGCAAACCCG-CTCTGTGACAAATA----AAACTAACACAGTACTTAGGCAGTGTTTCTCTTTCAGAAAGGATTCTATTTCCAATA--CAATTAAGGAGGAACATTGTATCTCTCTC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8226376 259 - 10857215 GGTGAACGGGGAGGAACCT--GCGGCCTGCACGGTGAGCGAAGCACTGCCCAGCTGTGAGTGGCCGACGCAGGTAACCATAAGC-CAAAGCTGCCTCGGACTAAAGGAAACGTC--CA-CACCTAG---------CTTGGGGTGGAGTCGCAAACCTCTGCAC-------------TAAACTGAAAGCCTG-CTCTGTGACAAATA----AAACTAACACAGTACTTAGACAGTGTTTCTCTTTCAGAAAGGATTCTATTTCCAGTA--CAACTGAGGAGGAACATTGTA----TCTC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15618112 259 - 23502949 GGTGAACGGGGAGGAACCT--GCGGCCCGCACGGTGAGCGAAGCACTGCCCAGCTGTGAGTGGCTGACACAGGTTACTATAAGC-CAAAGCTGCCTCGGACTAAAGGAAACGTC--CA-TACCCAG---------CTTGGGGTGGAGTCGCAAACCTCTGCGC-------------TAAACTGCAAACTTG-CTCTGTGACAAATA----AAACTAACACAGCACTTAGACAGTGTTTCTCTTTCAGAAAGGATTCTGTTTCCAGTA--CAATGGAGGAGGAACGTTGTA----TCTC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169897452 251 + 171630274 GGTGGACCAGCAGGAACCCCGGCAGCCCGCACCGTGCAGGAAGCACTGCTCAGCTGTGAGGGCCCGATGTAGGCAACCATAAGC-CGAAGCCACCGTGGATTAAAGGAAA-----------CACAG---------CTTGGGGTGGAGCTGCAAACCTCTCCAC-------------TGTGCTGCAAAGAGG-CTGCACGACAGATC----AAACTCATGCAGCACTTAGGC--TGTTTCTCTTTCAGAGAGGATTTTATCTCTAGCA--GAATTGAGGAGAAACATTGTA----TCTC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1302786 231 - 2905041 GGTGAACCGGGAGGAACCCCGTCAGCCCGCATGGTGCAGGAAGCACGGCCCAGCTGTGAGTGCCCGATGTAGGCAACCAAAAGC-CGAAGCCACCGTGGATGAAAGGAAA----------GCACAG---------CTT-GGGTGGAGCTGCAGGC---------------------------------AGG-CCGCATGACGGATC----AAACTCATGCAGCACTTAGCC--TGTTTCTCCTTGAGAGAGGATTTTGTCTCCAGTA--GAATTGAGGAGAAACATTGTA----TCTC i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1265088 232 - 2164891 GGTGAACCGGGAGGAACACCATCAGCCCACACAGCGCAGGAAGCACTGCTTAGCTGTGAGTGCCCGATGTAGGCAACCATAAGC-CAAAGCCACCGTGGATTAAAGGAAA----------ACACAG---------CTTGGGGTGGAGCTGCAAAC---------------------------------AGG-CTGCATGACTGATC----AAACTCAGGCAGCGCTTAGAC--TGTTTCTCTTTCAGAGAGGATTTTGTCTCCAGCA--GAATTGAGGAGAAACATTGTA----TCTC i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1514221 251 - 1813869 GGTGAACCGGGAGGAACCCAATCAGCCCGCACGGTGCAGGAAGCACTGCTCAGCTGTGAGTGCCCGATGTAGGCAACCATAAGC-CAAAGCCACCGTGGATTAAAGGAAA-----------CGCAG---------CTTGGGGTGGAGTTGCAAACCTCCCCAC-------------TGTGCTGCAAACACG-CTGCATGACAGATC----AAACTCATGCAGCACTTAGAC--TGTTTCTCTTTCAGAGAGGATTTTATCTCCAGTA--GAATTGAGGAGAAACATTGTA----TCTC i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10955026 245 - 12073884 GCTGGATAGTAGGGG--CTGGTTTGCCTGCTCTGTTGGCCAA-CGCTTCTCAGTGGTGAGCATCAAGGGCGCGTGGCTGTGAGTGAAAAGCCACCTTGGGTTAAAAGAGA----------ACCCAGGACAAATGACATGGGGCAGGTGTGCAAACACCCAC--------------------------CTTG-CTGTACGGCAAATG----AAGGGAAGGCAGCACGGAGCC--CACCTCTCTCTGAGAAA-GATTCCATCTCCAGAA--CAGGGGAGAAGGAATGTCAAA----CCTC i otoGar3.GL873575 I 4 C 0 s canFam3.chr1 56180414 234 + 122678785 ------------GGACCTGTGTTTGCCTGCA--GTGAGCAGAGCGCTTCTCAG----GAG-----AAGGCAAGTAGCCATAAGC-CAAAACCACTGTGGATTAAAAGAGAAGTCAACA-CATACAA---------TTT---ATGGAGATGCTAACCTCCGCAC-------------CATGATGCAAGCATG-TTGTATGGCAAAGAGAATGAATGAATGCAACACTGAGATTGTATTTCTCTTTCAGAAAGGGTTTTATTTCCA---------TGAAAAAGAGCATTATA----TCTC i canFam3.chr1 C 0 I 95 s dasNov3.JH569188 579173 262 + 760995 GGTGAAAAGAAGGGAGCCCTATTTGCCTGCACAAAGAGCA---------CCAG------GTATCAGATGCAAGTAACCATAGGC-CAAAGCCACCCTGGATTAAAACAAAAGTC--AATTATGAGA---------TTTGGGGTACAAGTACAAATCTCTACACGAGTCATCAAGCTTATACGGCAAGCATG-TCAGATGACAAATA----AAATGAATGCAACACCAAGACTGTATTTCTCTTTCAGAAGGGATTTTACTTCCAGCATTTTGTTGAAAAGGAATATTTTA----TCTC i dasNov3.JH569188 C 0 C 0 a score=26791.000000 s hg38.chr6_KB021644v2_alt 112527 4 + 185823 -TCAA s panTro5.chr6 173568225 4 + 175400573 -TCAA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171802316 4 + 173848474 -TCAA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11485111 4 - 12463322 -TCAA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156310453 4 + 157873769 -ACAA i nomLeu3.chr3 I 1 C 0 s rheMac8.chr4 170340710 4 + 172585720 -TCAG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169086090 4 - 170955103 -TCAG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8372617 4 + 10161646 -TCAG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1403498 4 + 3144229 -TCAG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96690024 4 + 98384682 -TCAG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8226635 4 - 10857215 -TCAG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15618371 4 - 23502949 -TCAG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169897703 4 + 171630274 -TCAA i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1303017 4 - 2905041 -TCAA i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1265320 4 - 2164891 -TCAA i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1514472 4 - 1813869 -TCAA i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10955271 4 - 12073884 -ACCA i otoGar3.GL873575 C 0 C 0 s dasNov3.JH569188 579435 4 + 760995 ATTA- i dasNov3.JH569188 C 0 C 0 e canFam3.chr1 56180648 95 + 122678785 I a score=24386.000000 s hg38.chr6_KB021644v2_alt 112531 2 + 185823 TG s panTro5.chr6 173568229 2 + 175400573 TG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171802320 2 + 173848474 TG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11485115 2 - 12463322 TG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156310457 2 + 157873769 TG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170340714 2 + 172585720 TG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169086094 2 - 170955103 TG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8372621 2 + 10161646 TG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1403502 2 + 3144229 TG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96690028 2 + 98384682 TG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8226639 2 - 10857215 TG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15618375 2 - 23502949 TG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169897707 2 + 171630274 TG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1303021 2 - 2905041 TG i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1265324 2 - 2164891 TA i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1514476 2 - 1813869 TG i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10955275 2 - 12073884 CG i otoGar3.GL873575 C 0 I 732 s canFam3.chr1 56180743 2 + 122678785 TG i canFam3.chr1 I 95 C 0 s dasNov3.JH569188 579439 2 + 760995 AG i dasNov3.JH569188 C 0 C 0 a score=60251.000000 s hg38.chr6_KB021644v2_alt 112533 5 + 185823 GTGAA s panTro5.chr6 173568231 5 + 175400573 GTGAA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171802322 5 + 173848474 GTGAA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11485117 5 - 12463322 GTGAA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156310459 5 + 157873769 GTGAA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170340716 5 + 172585720 GTGAA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169086096 5 - 170955103 GTGAA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8372623 5 + 10161646 GTGAA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1403504 5 + 3144229 GTGAA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96690030 5 + 98384682 GTGAA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8226641 5 - 10857215 GTGAA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15618377 5 - 23502949 GTGAA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169897709 5 + 171630274 GTGAA i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1303023 5 - 2905041 GTGAA i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1265326 5 - 2164891 GTGAA i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1514478 5 - 1813869 GTGAA i aotNan1.NW_018494782v1 C 0 C 0 s canFam3.chr1 56180745 5 + 122678785 TTGGG i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 579441 5 + 760995 ATAAA i dasNov3.JH569188 C 0 I 449 e otoGar3.GL873575 10955277 732 - 12073884 I a score=410371.000000 s hg38.chr6_KB021644v2_alt 112538 40 + 185823 ACTCTCCAGGTGTTGTCCCGAGTAATGTTTCGGGGACAGA s panTro5.chr6 173568236 40 + 175400573 ACTCTCCAGGTGTTGTCCAGAGTAATGTTTCGGGGACAGA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171802327 40 + 173848474 ACTCTCCAGGTGTTGTCCAGAGTAATGTTTCGGGGACAGA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11485122 40 - 12463322 ACTCTCCAGGTGTTGTTCAGAGTAATGTTTCCGGGACAGA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156310464 39 + 157873769 ACTCTCCATGTGTTGTCCAGAGTAATGTTTC-AGGACAGA i nomLeu3.chr3 C 0 M 100 s rheMac8.chr4 170340721 40 + 172585720 ACTCTCCAGGTGTTGTCCAGAGTAACATTTTGGGGACAGA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169086101 40 - 170955103 ACTCTCCAGGTGTTGTCCAGAGTAACATTTTGGGGACAGA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8372628 40 + 10161646 AGTCTCCAGGTGTTGTCCAGAGTAACATTTTGGGGACAGA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1403509 40 + 3144229 ACTCTCCAGGTGTTGTCCAGAGTAACATTTTGGGGACAGA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96690035 40 + 98384682 ACTCTCCAGGTGTTGTCCAGAGTAACATTTTGGGGACAGA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8226646 40 - 10857215 ACTCTCCAGGTGTTGTCCAGAGTAACATTTTGGCGACAGA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15618382 40 - 23502949 ACTCTCCAGGTGTTATCCAGAGTAACATTTTGGGGACAGA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169897714 40 + 171630274 ACTCTCCAGGTGTTGTCCAGAGTCACGTTTTGGGGACAGA i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1303028 40 - 2905041 ACTCCCCAGCTGTTGTCCAGAGTCACGTTTTGGGGACAGA i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1265331 40 - 2164891 ACTCTCCAGGTGTTGTCCAGAGTCACCTTTTGGAGACAGA i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1514483 40 - 1813869 ACTCTCAAGGTGTTGTCCAGAGTCACGTTTTGGGGACAGA i aotNan1.NW_018494782v1 C 0 C 0 s canFam3.chr1 56180750 40 + 122678785 ACTCTCCAGGTGTTGTTCGGACTTCCCTTTCTCTGAAAGA i canFam3.chr1 C 0 C 0 e otoGar3.GL873575 10955277 732 - 12073884 I e dasNov3.JH569188 579446 449 + 760995 I a score=46248.000000 s hg38.chr6_KB021644v2_alt 112578 6 + 185823 AAAGAT s panTro5.chr6 173568276 6 + 175400573 AAAGAT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171802367 6 + 173848474 AAAGAT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11485162 6 - 12463322 AAAGAT i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170340761 6 + 172585720 AAAGAT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169086141 6 - 170955103 AAAGAT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8372668 6 + 10161646 AAAGAT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1403549 6 + 3144229 AAAGAT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96690075 6 + 98384682 AAAGAT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8226686 6 - 10857215 AAAGAT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15618422 6 - 23502949 AAAGAA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169897754 6 + 171630274 AAAGTT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1303068 6 - 2905041 AAAGTT i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1265371 6 - 2164891 AAAGTT i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1514523 6 - 1813869 GAAGTT i aotNan1.NW_018494782v1 C 0 C 0 s canFam3.chr1 56180790 6 + 122678785 AAGTAT i canFam3.chr1 C 0 I 15 e otoGar3.GL873575 10955277 732 - 12073884 I e dasNov3.JH569188 579446 449 + 760995 I e nomLeu3.chr3 156310503 100 + 157873769 M a score=69776.000000 s hg38.chr6_KB021644v2_alt 112584 7 + 185823 GAGAGGG s panTro5.chr6 173568282 7 + 175400573 GAGAGGG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171802373 7 + 173848474 GAGAGGG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11485168 7 - 12463322 GAGAGGG i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170340767 7 + 172585720 GAGAGGG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169086147 7 - 170955103 GAGAGGG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8372674 7 + 10161646 GAGAGGG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1403555 7 + 3144229 GAGAGGG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96690081 7 + 98384682 GAGAGGG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8226692 7 - 10857215 GAGAGGG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15618428 7 - 23502949 GAGAGGG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169897760 7 + 171630274 GAGAGGG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1303074 7 - 2905041 GAGAGGG i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1265377 7 - 2164891 GAGAGGG i cebCap1.NW_016107695v1 C 0 I 416 s aotNan1.NW_018494782v1 1514529 7 - 1813869 GAGAGGA i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10955277 732 - 12073884 I e dasNov3.JH569188 579446 449 + 760995 I e canFam3.chr1 56180796 15 + 122678785 I e nomLeu3.chr3 156310503 100 + 157873769 M a score=110676.000000 s hg38.chr6_KB021644v2_alt 112591 19 + 185823 TACAGAGCTACCCGGGTCA s panTro5.chr6 173568289 18 + 175400573 TACAGAGCTACT-GGGTCA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171802380 18 + 173848474 TACAGAGCTACC-GGGTCA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11485175 19 - 12463322 TACAGAGCTACCCGGGTCA i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170340774 19 + 172585720 TGCAGGGCTACCCAGGTCA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169086154 19 - 170955103 TGCCGGGCTACCCAGGTCA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8372681 19 + 10161646 TGCAGGGCTACCCAGGTCA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1403562 19 + 3144229 TGCAGGGCTACCCAGGTCA i cerAty1.NW_012002071v1 C 0 I 660 s chlSab2.chr13 96690088 19 + 98384682 TGCAGGGCTACCCAGGTCA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8226699 19 - 10857215 TGCCGGGCTACCCAGGTCA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15618435 19 - 23502949 TGCAGGGCTACCCGGGTCA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169897767 19 + 171630274 TACAGTGCTACCATGGTCA i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1303081 19 - 2905041 TACAGTGCTACCAGAATCA i saiBol1.JH378287 C 0 C 0 s aotNan1.NW_018494782v1 1514536 19 - 1813869 TACAGTGCTACCAGGGGCA i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10955277 732 - 12073884 I e cebCap1.NW_016107695v1 1265384 416 - 2164891 I e dasNov3.JH569188 579446 449 + 760995 I e canFam3.chr1 56180796 15 + 122678785 I e nomLeu3.chr3 156310503 100 + 157873769 M a score=118568.000000 s hg38.chr6_KB021644v2_alt 112610 23 + 185823 GAACTGTCCCCTCAGGTCAGAGC s panTro5.chr6 173568307 23 + 175400573 GAACTGTCCCCTCAGGTCAGAGC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171802398 23 + 173848474 GAACTGTCCCCTCAGGTCAGAGC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11485194 22 - 12463322 GAACTGT-CCCTCAGGTCAGAGC i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170340793 23 + 172585720 GAGTTGTCACCTCAGGTCAGAGC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169086173 23 - 170955103 GAGTTGTCACCTCAGGTCAGAGC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8372700 23 + 10161646 GAGTTGTCACCTCAGGTCAGAGC i macNem1.NW_012011000v1 C 0 C 0 s chlSab2.chr13 96690107 23 + 98384682 GAGTTGTCACCTCAGGTCAGAGC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8226718 23 - 10857215 GAGTTGTCCCCCGAGGTCAGAAA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15618454 23 - 23502949 GAGTTGTCCCCTCAGGTCAGAGC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169897786 22 + 171630274 GAACTG-CCCTCCAGGTCAGAAC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1303100 22 - 2905041 GGACTG-CCCCCCAGGTCAGGGC i saiBol1.JH378287 C 0 C 0 s aotNan1.NW_018494782v1 1514555 23 - 1813869 GAACTGCCCCCCCAGGTCAGAGC i aotNan1.NW_018494782v1 C 0 I 105 e otoGar3.GL873575 10955277 732 - 12073884 I e cebCap1.NW_016107695v1 1265384 416 - 2164891 I e dasNov3.JH569188 579446 449 + 760995 I e canFam3.chr1 56180796 15 + 122678785 I e cerAty1.NW_012002071v1 1403581 660 + 3144229 I e nomLeu3.chr3 156310503 100 + 157873769 M a score=171556.000000 s hg38.chr6_KB021644v2_alt 112633 42 + 185823 TGCTCCCCCAGGTCAGAATGGCCC----------------CCCCAGGTCAAAGCTGCC s panTro5.chr6 173568330 42 + 175400573 TGCTCCCCCAGGTCAGAATGGCCC----------------CCCCAGGTCAAAGCTGCC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171802421 42 + 173848474 TGCTCCCCCAGGTCAGAATGGCCC----------------CCCCAGGTCAAAGCTGCC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11485216 42 - 12463322 TGCTCCCCCAGGTCAGAATGGCCC----------------CCCCAGGTCAAAGCTGCC i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170340816 42 + 172585720 TGTCCCCCGAGGTCAGAAAGGTCC----------------CCCAAGGTCAGAACTGCC i rheMac8.chr4 C 0 I 1 s macFas5.chr4 169086196 42 - 170955103 TGTCCCCCGAGGTCAGAAAGGTCC----------------CCCAAGGTCAGAACTGCC i macFas5.chr4 C 0 I 1 s macNem1.NW_012011000v1 8372723 42 + 10161646 TGTCCCCCGAGGTCAGAAAGGTCC----------------CCCAAGGTCAGAACTGCC i macNem1.NW_012011000v1 C 0 I 1 s chlSab2.chr13 96690130 42 + 98384682 TGTCCCCCGAGGTCAGAAAGGTCC----------------CCCAAGGTCAGAACTGCC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8226741 42 - 10857215 GGTCCCCCAAGGTCAGAACTGCCT----------------CCCCAGGTCAGAGCTGTC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15618477 42 - 23502949 TGTCCCCCAAGATCAGAAAGGTCC----------------CCCAAGGTCAGAACTGCC i colAng1.NW_012114488v1 C 0 I 1 s calJac3.chr4 169897808 57 + 171630274 -TGCCCCCCAGGTCAGAGCTACTCCCCAGGTTAGAACTAACCCCAGGTCAGAGCTACC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1303122 43 - 2905041 -TACCCCCCAGGTTAGAACTACCCCC--------------CCCCAGGCCAGAATGGTC i saiBol1.JH378287 C 0 C 0 e otoGar3.GL873575 10955277 732 - 12073884 I e aotNan1.NW_018494782v1 1514578 105 - 1813869 I e cebCap1.NW_016107695v1 1265384 416 - 2164891 I e dasNov3.JH569188 579446 449 + 760995 I e canFam3.chr1 56180796 15 + 122678785 I e cerAty1.NW_012002071v1 1403581 660 + 3144229 I e nomLeu3.chr3 156310503 100 + 157873769 M a score=4591.000000 s hg38.chr6_KB021644v2_alt 112675 2 + 185823 CC- s panTro5.chr6 173568372 2 + 175400573 CC- i panTro5.chr6 C 0 I 1 s panPan2.chr6 171802463 2 + 173848474 CC- i panPan2.chr6 C 0 I 1 s gorGor5.CYUI01015032v1 11485258 2 - 12463322 CC- i gorGor5.CYUI01015032v1 C 0 I 1 s rheMac8.chr4 170340859 2 + 172585720 CC- i rheMac8.chr4 I 1 I 1 s macFas5.chr4 169086239 2 - 170955103 CC- i macFas5.chr4 I 1 I 1 s macNem1.NW_012011000v1 8372766 2 + 10161646 CC- i macNem1.NW_012011000v1 I 1 I 1 s chlSab2.chr13 96690172 2 + 98384682 TC- i chlSab2.chr13 C 0 I 2 s manLeu1.NW_012106474v1 8226783 2 - 10857215 CC- i manLeu1.NW_012106474v1 C 0 I 56 s colAng1.NW_012114488v1 15618520 2 - 23502949 CC- i colAng1.NW_012114488v1 I 1 I 1 s calJac3.chr4 169897865 2 + 171630274 -CC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1303165 1 - 2905041 -C- i saiBol1.JH378287 C 0 C 0 e otoGar3.GL873575 10955277 732 - 12073884 I e aotNan1.NW_018494782v1 1514578 105 - 1813869 I e cebCap1.NW_016107695v1 1265384 416 - 2164891 I e dasNov3.JH569188 579446 449 + 760995 I e canFam3.chr1 56180796 15 + 122678785 I e cerAty1.NW_012002071v1 1403581 660 + 3144229 I e nomLeu3.chr3 156310503 100 + 157873769 M a score=-8688.000000 s hg38.chr6_KB021644v2_alt 112677 2 + 185823 -TG s panTro5.chr6 173568375 2 + 175400573 -TG i panTro5.chr6 I 1 C 0 s panPan2.chr6 171802466 2 + 173848474 -TG i panPan2.chr6 I 1 C 0 s gorGor5.CYUI01015032v1 11485261 2 - 12463322 -TG i gorGor5.CYUI01015032v1 I 1 C 0 s rheMac8.chr4 170340862 1 + 172585720 -C- i rheMac8.chr4 I 1 C 0 s macFas5.chr4 169086242 1 - 170955103 -C- i macFas5.chr4 I 1 C 0 s macNem1.NW_012011000v1 8372769 1 + 10161646 -C- i macNem1.NW_012011000v1 I 1 C 0 s chlSab2.chr13 96690176 1 + 98384682 -C- i chlSab2.chr13 I 2 C 0 s colAng1.NW_012114488v1 15618523 1 - 23502949 -C- i colAng1.NW_012114488v1 I 1 C 0 s calJac3.chr4 169897867 2 + 171630274 CC- i calJac3.chr4 C 0 C 0 e otoGar3.GL873575 10955277 732 - 12073884 I e saiBol1.JH378287 1303166 0 - 2905041 C e aotNan1.NW_018494782v1 1514578 105 - 1813869 I e cebCap1.NW_016107695v1 1265384 416 - 2164891 I e dasNov3.JH569188 579446 449 + 760995 I e canFam3.chr1 56180796 15 + 122678785 I e cerAty1.NW_012002071v1 1403581 660 + 3144229 I e nomLeu3.chr3 156310503 100 + 157873769 M e manLeu1.NW_012106474v1 8226785 56 - 10857215 I a score=36884.000000 s hg38.chr6_KB021644v2_alt 112679 8 + 185823 AGGACAGA s panTro5.chr6 173568377 8 + 175400573 AGGACAGA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171802468 8 + 173848474 AGGACAGA i panPan2.chr6 C 0 I 381 s gorGor5.CYUI01015032v1 11485263 8 - 12463322 AGGTCAGA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156310603 8 + 157873769 AGGTCAGA i nomLeu3.chr3 M 100 C 0 s rheMac8.chr4 170340863 8 + 172585720 AGGTCAGA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169086243 8 - 170955103 AGGTCAGA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8372770 8 + 10161646 AGGTCAGA i macNem1.NW_012011000v1 C 0 C 0 s chlSab2.chr13 96690177 8 + 98384682 AGGTCAGA i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15618524 8 - 23502949 AGGTCAGA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169897869 8 + 171630274 AGGTCAGA i calJac3.chr4 C 0 C 0 e otoGar3.GL873575 10955277 732 - 12073884 I e saiBol1.JH378287 1303166 0 - 2905041 C e aotNan1.NW_018494782v1 1514578 105 - 1813869 I e cebCap1.NW_016107695v1 1265384 416 - 2164891 I e dasNov3.JH569188 579446 449 + 760995 I e canFam3.chr1 56180796 15 + 122678785 I e cerAty1.NW_012002071v1 1403581 660 + 3144229 I e manLeu1.NW_012106474v1 8226785 56 - 10857215 I a score=6380.000000 s hg38.chr6_KB021644v2_alt 112687 5 + 185823 ACGGC s panTro5.chr6 173568385 5 + 175400573 ACGGC i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11485271 5 - 12463322 ACGGC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156310611 5 + 157873769 GCTGC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170340871 5 + 172585720 GCTGT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169086251 5 - 170955103 GCTGT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8372778 5 + 10161646 GCTGT i macNem1.NW_012011000v1 C 0 C 0 s chlSab2.chr13 96690185 5 + 98384682 GCTGT i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15618532 5 - 23502949 GCTGT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169897877 4 + 171630274 GCTA- i calJac3.chr4 C 0 C 0 e otoGar3.GL873575 10955277 732 - 12073884 I e saiBol1.JH378287 1303166 0 - 2905041 C e aotNan1.NW_018494782v1 1514578 105 - 1813869 I e cebCap1.NW_016107695v1 1265384 416 - 2164891 I e dasNov3.JH569188 579446 449 + 760995 I e canFam3.chr1 56180796 15 + 122678785 I e cerAty1.NW_012002071v1 1403581 660 + 3144229 I e manLeu1.NW_012106474v1 8226785 56 - 10857215 I e panPan2.chr6 171802476 381 + 173848474 I a score=103812.000000 s hg38.chr6_KB021644v2_alt 112692 22 + 185823 CCCCCCAGGTCAGAACTGCCCC s panTro5.chr6 173568390 22 + 175400573 CCCCCCAGGTCAGAACTGCCCC i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11485276 21 - 12463322 CCCCCCAGGTCAGAACTG-CCC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156310616 21 + 157873769 CTCCCCGGGTCATAACTG-CCC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170340876 22 + 172585720 CCCCCCAGGTCAGAACTGCCCC i rheMac8.chr4 C 0 I 1 s macFas5.chr4 169086256 22 - 170955103 CCCCCCAGGTCAGAACTGCCCC i macFas5.chr4 C 0 I 1 s macNem1.NW_012011000v1 8372783 22 + 10161646 CCCCCCAGGTCAGAACTGCCCC i macNem1.NW_012011000v1 C 0 I 1 s chlSab2.chr13 96690190 22 + 98384682 CCTCCCATGTCAGAACTGTCCC i chlSab2.chr13 C 0 I 1 s colAng1.NW_012114488v1 15618537 22 - 23502949 CCCCCCAGGTCAGAACGGCCCC i colAng1.NW_012114488v1 C 0 I 3 s calJac3.chr4 169897881 22 + 171630274 CTCCCCAGGTTAGAACTACCCC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1303166 19 - 2905041 --CCCCAGGTTATAACTA-CCC i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1265800 22 - 2164891 CCCCCCAGGTCAGAACTGCCCC i cebCap1.NW_016107695v1 I 416 C 0 e otoGar3.GL873575 10955277 732 - 12073884 I e aotNan1.NW_018494782v1 1514578 105 - 1813869 I e dasNov3.JH569188 579446 449 + 760995 I e canFam3.chr1 56180796 15 + 122678785 I e cerAty1.NW_012002071v1 1403581 660 + 3144229 I e manLeu1.NW_012106474v1 8226785 56 - 10857215 I e panPan2.chr6 171802476 381 + 173848474 I a score=-2120.000000 s hg38.chr6_KB021644v2_alt 112714 2 + 185823 CG- s panTro5.chr6 173568412 2 + 175400573 CG- i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11485297 2 - 12463322 CG- i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156310637 2 + 157873769 CC- i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170340899 2 + 172585720 CC- i rheMac8.chr4 I 1 C 0 s macFas5.chr4 169086279 2 - 170955103 CC- i macFas5.chr4 I 1 C 0 s macNem1.NW_012011000v1 8372806 2 + 10161646 CC- i macNem1.NW_012011000v1 I 1 C 0 s chlSab2.chr13 96690213 2 + 98384682 CC- i chlSab2.chr13 I 1 C 0 s calJac3.chr4 169897903 1 + 171630274 -C- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1303185 1 - 2905041 -C- i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1265822 2 - 2164891 -CG i cebCap1.NW_016107695v1 C 0 I 117 e otoGar3.GL873575 10955277 732 - 12073884 I e aotNan1.NW_018494782v1 1514578 105 - 1813869 I e dasNov3.JH569188 579446 449 + 760995 I e colAng1.NW_012114488v1 15618559 3 - 23502949 I e canFam3.chr1 56180796 15 + 122678785 I e cerAty1.NW_012002071v1 1403581 660 + 3144229 I e manLeu1.NW_012106474v1 8226785 56 - 10857215 I e panPan2.chr6 171802476 381 + 173848474 I a score=29584.000000 s hg38.chr6_KB021644v2_alt 112716 14 + 185823 ACCCAGGTCAGAA----C--- s panTro5.chr6 173568414 14 + 175400573 ACCCAGGTCAGAA----C--- i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11485299 14 - 12463322 ACCCAGGTCAGAA----C--- i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156310639 18 + 157873769 CCCCAGGTCAGAGCTGCC--- i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170340901 14 + 172585720 ATCCACATCAGAA----C--- i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169086281 14 - 170955103 ATCCACATCAGAA----C--- i macFas5.chr4 C 0 T 57 s macNem1.NW_012011000v1 8372808 14 + 10161646 ACACACATCAGAA----C--- i macNem1.NW_012011000v1 C 0 C 0 s chlSab2.chr13 96690215 14 + 98384682 ACCCACATCAGAA----C--- i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169897904 16 + 171630274 -CCCAGGTCAGAG----CTAC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1303186 16 - 2905041 -CCCAGGTCAGAG----CCAC i saiBol1.JH378287 C 0 C 0 e otoGar3.GL873575 10955277 732 - 12073884 I e aotNan1.NW_018494782v1 1514578 105 - 1813869 I e cebCap1.NW_016107695v1 1265824 117 - 2164891 I e dasNov3.JH569188 579446 449 + 760995 I e colAng1.NW_012114488v1 15618559 3 - 23502949 I e canFam3.chr1 56180796 15 + 122678785 I e cerAty1.NW_012002071v1 1403581 660 + 3144229 I e manLeu1.NW_012106474v1 8226785 56 - 10857215 I e panPan2.chr6 171802476 381 + 173848474 I a score=50791.000000 s hg38.chr6_KB021644v2_alt 112730 14 + 185823 TCCCCAGGTCAGAG s panTro5.chr6 173568428 14 + 175400573 TCCCCAGGTCAGAG i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11485313 14 - 12463322 TCCCCAGGTCAGAG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156310657 14 + 157873769 TCCCCAGGTCAGAA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170340915 14 + 172585720 TCCCTAGGTCAGAG i rheMac8.chr4 C 0 I 22 s macFas5.chr4 169086238 14 - 170955103 TCCCCAGGTCAGAG i macFas5.chr4 T 57 C 0 s macNem1.NW_012011000v1 8372822 14 + 10161646 TCCCTAGGTCAGAG i macNem1.NW_012011000v1 C 0 C 0 s chlSab2.chr13 96690229 14 + 98384682 TCCCTAGGCCAGAG i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169897920 14 + 171630274 TCCCCAGGTCAGAG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1303202 14 - 2905041 CACCCAGGTTAGAA i saiBol1.JH378287 C 0 C 0 e otoGar3.GL873575 10955277 732 - 12073884 I e aotNan1.NW_018494782v1 1514578 105 - 1813869 I e cebCap1.NW_016107695v1 1265824 117 - 2164891 I e dasNov3.JH569188 579446 449 + 760995 I e colAng1.NW_012114488v1 15618559 3 - 23502949 I e canFam3.chr1 56180796 15 + 122678785 I e cerAty1.NW_012002071v1 1403581 660 + 3144229 I e manLeu1.NW_012106474v1 8226785 56 - 10857215 I e panPan2.chr6 171802476 381 + 173848474 I a score=42683.000000 s hg38.chr6_KB021644v2_alt 112744 23 + 185823 CTGCC------TCCCCAGGTCAGAACTGC s panTro5.chr6 173568442 23 + 175400573 CTGCC------TCCCCAGGTCACAACTGC i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11485327 23 - 12463322 CTGCC------TCCCCAGGTCAGAACTGC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156310671 29 + 157873769 CTGCCCCCCCACCCCCAGGTCAGAGCTGC i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169086252 23 - 170955103 CTGTC------CCCCCAGGTCAGAACTGC i macFas5.chr4 C 0 I 38 s macNem1.NW_012011000v1 8372836 23 + 10161646 TTGTT------CCCCGAGGTCAGAAGGGC i macNem1.NW_012011000v1 C 0 C 0 s chlSab2.chr13 96690243 23 + 98384682 TTGTT------CCCCGAGGTCAGAAAGGC i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169897934 22 + 171630274 CTACC-------CCCCAGATCAGAGCTAC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1303216 22 - 2905041 CTACC-------CCCCAGGTCAGAACAGT i saiBol1.JH378287 C 0 C 0 e otoGar3.GL873575 10955277 732 - 12073884 I e aotNan1.NW_018494782v1 1514578 105 - 1813869 I e cebCap1.NW_016107695v1 1265824 117 - 2164891 I e dasNov3.JH569188 579446 449 + 760995 I e colAng1.NW_012114488v1 15618559 3 - 23502949 I e canFam3.chr1 56180796 15 + 122678785 I e cerAty1.NW_012002071v1 1403581 660 + 3144229 I e manLeu1.NW_012106474v1 8226785 56 - 10857215 I e rheMac8.chr4 170340929 22 + 172585720 I e panPan2.chr6 171802476 381 + 173848474 I a score=1757.000000 s hg38.chr6_KB021644v2_alt 112767 1 + 185823 C s panTro5.chr6 173568465 1 + 175400573 C i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11485350 1 - 12463322 C i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156310700 1 + 157873769 C i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169086313 1 - 170955103 T i macFas5.chr4 I 38 C 0 s macNem1.NW_012011000v1 8372859 1 + 10161646 C i macNem1.NW_012011000v1 C 0 C 0 s chlSab2.chr13 96690266 1 + 98384682 C i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169897956 1 + 171630274 T i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1303238 1 - 2905041 C i saiBol1.JH378287 C 0 C 0 e otoGar3.GL873575 10955277 732 - 12073884 I e aotNan1.NW_018494782v1 1514578 105 - 1813869 I e cebCap1.NW_016107695v1 1265824 117 - 2164891 I e dasNov3.JH569188 579446 449 + 760995 I e colAng1.NW_012114488v1 15618559 3 - 23502949 I e canFam3.chr1 56180796 15 + 122678785 I e cerAty1.NW_012002071v1 1403581 660 + 3144229 I e manLeu1.NW_012106474v1 8226785 56 - 10857215 I e rheMac8.chr4 170340929 22 + 172585720 I e panPan2.chr6 171802476 381 + 173848474 I a score=7483.000000 s hg38.chr6_KB021644v2_alt 112768 3 + 185823 CCC s panTro5.chr6 173568466 3 + 175400573 CCC i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11485351 3 - 12463322 CCC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156310701 3 + 157873769 CCC i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169086314 3 - 170955103 CCC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8372860 3 + 10161646 CTC i macNem1.NW_012011000v1 C 0 C 0 s calJac3.chr4 169897957 3 + 171630274 CCC i calJac3.chr4 C 0 I 1 s saiBol1.JH378287 1303239 3 - 2905041 CCC i saiBol1.JH378287 C 0 C 0 e otoGar3.GL873575 10955277 732 - 12073884 I e aotNan1.NW_018494782v1 1514578 105 - 1813869 I e cebCap1.NW_016107695v1 1265824 117 - 2164891 I e dasNov3.JH569188 579446 449 + 760995 I e colAng1.NW_012114488v1 15618559 3 - 23502949 I e canFam3.chr1 56180796 15 + 122678785 I e chlSab2.chr13 96690267 0 + 98384682 C e cerAty1.NW_012002071v1 1403581 660 + 3144229 I e manLeu1.NW_012106474v1 8226785 56 - 10857215 I e rheMac8.chr4 170340929 22 + 172585720 I e panPan2.chr6 171802476 381 + 173848474 I a score=-1915.000000 s hg38.chr6_KB021644v2_alt 112771 1 + 185823 -C s panTro5.chr6 173568469 1 + 175400573 -C i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11485354 1 - 12463322 -C i gorGor5.CYUI01015032v1 C 0 I 171 s nomLeu3.chr3 156310704 1 + 157873769 -C i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169086317 1 - 170955103 -T i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8372863 1 + 10161646 -C i macNem1.NW_012011000v1 C 0 C 0 s saiBol1.JH378287 1303242 1 - 2905041 G- i saiBol1.JH378287 C 0 C 0 e otoGar3.GL873575 10955277 732 - 12073884 I e aotNan1.NW_018494782v1 1514578 105 - 1813869 I e cebCap1.NW_016107695v1 1265824 117 - 2164891 I e calJac3.chr4 169897960 1 + 171630274 I e dasNov3.JH569188 579446 449 + 760995 I e colAng1.NW_012114488v1 15618559 3 - 23502949 I e canFam3.chr1 56180796 15 + 122678785 I e chlSab2.chr13 96690267 0 + 98384682 C e cerAty1.NW_012002071v1 1403581 660 + 3144229 I e manLeu1.NW_012106474v1 8226785 56 - 10857215 I e rheMac8.chr4 170340929 22 + 172585720 I e panPan2.chr6 171802476 381 + 173848474 I a score=-960.000000 s hg38.chr6_KB021644v2_alt 112772 1 + 185823 G s panTro5.chr6 173568470 1 + 175400573 G i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11485526 1 - 12463322 C i gorGor5.CYUI01015032v1 I 171 C 0 s nomLeu3.chr3 156310705 1 + 157873769 A i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169086318 1 - 170955103 G i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8372864 1 + 10161646 C i macNem1.NW_012011000v1 C 0 C 0 s saiBol1.JH378287 1303243 1 - 2905041 C i saiBol1.JH378287 C 0 C 0 e otoGar3.GL873575 10955277 732 - 12073884 I e aotNan1.NW_018494782v1 1514578 105 - 1813869 I e cebCap1.NW_016107695v1 1265824 117 - 2164891 I e calJac3.chr4 169897960 1 + 171630274 I e dasNov3.JH569188 579446 449 + 760995 I e colAng1.NW_012114488v1 15618559 3 - 23502949 I e canFam3.chr1 56180796 15 + 122678785 I e chlSab2.chr13 96690267 0 + 98384682 C e cerAty1.NW_012002071v1 1403581 660 + 3144229 I e manLeu1.NW_012106474v1 8226785 56 - 10857215 I e rheMac8.chr4 170340929 22 + 172585720 I e panPan2.chr6 171802476 381 + 173848474 I a score=13545.000000 s hg38.chr6_KB021644v2_alt 112773 19 + 185823 AGGTCAGAAAGG---CCCCC--CG s panTro5.chr6 173568471 19 + 175400573 AGGTCAGAAAGG---CCCCC--CC i panTro5.chr6 C 0 I 1 s gorGor5.CYUI01015032v1 11485527 18 - 12463322 AGGTCAGAACTG---CCCCC--G- i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156310706 18 + 157873769 AGGTCAGAAAGG---CCCCC--C- i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169086319 17 - 170955103 AGGTCAGAAGGG---CCCTC---- i macFas5.chr4 C 0 I 2 s macNem1.NW_012011000v1 8372865 19 + 10161646 AGGTCAGAACTG---ACCCCCC-- i macNem1.NW_012011000v1 C 0 I 1 s calJac3.chr4 169897961 18 + 171630274 AGGTTAGAACTA--ACCCCC---- i calJac3.chr4 I 1 C 0 s saiBol1.JH378287 1303244 20 - 2905041 AGGTTATAACTATCCCCCCC---- i saiBol1.JH378287 C 0 C 0 e otoGar3.GL873575 10955277 732 - 12073884 I e aotNan1.NW_018494782v1 1514578 105 - 1813869 I e cebCap1.NW_016107695v1 1265824 117 - 2164891 I e dasNov3.JH569188 579446 449 + 760995 I e colAng1.NW_012114488v1 15618559 3 - 23502949 I e canFam3.chr1 56180796 15 + 122678785 I e chlSab2.chr13 96690267 0 + 98384682 C e cerAty1.NW_012002071v1 1403581 660 + 3144229 I e manLeu1.NW_012106474v1 8226785 56 - 10857215 I e rheMac8.chr4 170340929 22 + 172585720 I e panPan2.chr6 171802476 381 + 173848474 I a score=6179.000000 s hg38.chr6_KB021644v2_alt 112792 30 + 185823 AGGTGAGAACTGCCTCTC-CAGGTCA-GAAGT s panTro5.chr6 173568491 32 + 175400573 AGGTGAGAACTGCCTGTCTCAGGACGCGAAGT i panTro5.chr6 I 1 C 0 s gorGor5.CYUI01015032v1 11485545 30 - 12463322 AGGTCAGAAAGGCCCCCC-CAGGTCA-GAACT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156310724 19 + 157873769 CGGTCAGAACGGCCCCCC-C------------ i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169086338 12 - 170955103 AGGTCAGAACTG-------------------- i macFas5.chr4 I 2 T 75 s calJac3.chr4 169897979 29 + 171630274 AGGTCAGAGCTA-CCCCC-CAGGTCA-GAGCT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1303264 30 - 2905041 AGGTGATAACTACCCCCC-CAGGTCA-TAATT i saiBol1.JH378287 C 0 I 38 e otoGar3.GL873575 10955277 732 - 12073884 I e aotNan1.NW_018494782v1 1514578 105 - 1813869 I e cebCap1.NW_016107695v1 1265824 117 - 2164891 I e dasNov3.JH569188 579446 449 + 760995 I e colAng1.NW_012114488v1 15618559 3 - 23502949 I e canFam3.chr1 56180796 15 + 122678785 I e chlSab2.chr13 96690267 0 + 98384682 C e cerAty1.NW_012002071v1 1403581 660 + 3144229 I e manLeu1.NW_012106474v1 8226785 56 - 10857215 I e macNem1.NW_012011000v1 8372884 1 + 10161646 I e rheMac8.chr4 170340929 22 + 172585720 I e panPan2.chr6 171802476 381 + 173848474 I a score=300.000000 s hg38.chr6_KB021644v2_alt 112822 1 + 185823 G s panTro5.chr6 173568523 1 + 175400573 G i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11485575 1 - 12463322 G i gorGor5.CYUI01015032v1 C 0 C 0 e otoGar3.GL873575 10955277 732 - 12073884 I e saiBol1.JH378287 1303294 38 - 2905041 I e aotNan1.NW_018494782v1 1514578 105 - 1813869 I e cebCap1.NW_016107695v1 1265824 117 - 2164891 I e calJac3.chr4 169898008 0 + 171630274 C e dasNov3.JH569188 579446 449 + 760995 I e colAng1.NW_012114488v1 15618559 3 - 23502949 I e canFam3.chr1 56180796 15 + 122678785 I e chlSab2.chr13 96690267 0 + 98384682 C e cerAty1.NW_012002071v1 1403581 660 + 3144229 I e nomLeu3.chr3 156310743 0 + 157873769 C e manLeu1.NW_012106474v1 8226785 56 - 10857215 I e macNem1.NW_012011000v1 8372884 1 + 10161646 I e rheMac8.chr4 170340929 22 + 172585720 I e macFas5.chr4 169086350 75 - 170955103 T e panPan2.chr6 171802476 381 + 173848474 I a score=1091.000000 s hg38.chr6_KB021644v2_alt 112823 6 + 185823 -CCCCCC s panTro5.chr6 173568524 6 + 175400573 -CCCCCC i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11485576 6 - 12463322 -CCCCCC i gorGor5.CYUI01015032v1 C 0 T 227 s macFas5.chr4 169086275 6 - 170955103 -CCCCCC i macFas5.chr4 T 75 C 0 s calJac3.chr4 169898008 3 + 171630274 ACC---- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1303332 3 - 2905041 ACC---- i saiBol1.JH378287 I 38 C 0 e otoGar3.GL873575 10955277 732 - 12073884 I e aotNan1.NW_018494782v1 1514578 105 - 1813869 I e cebCap1.NW_016107695v1 1265824 117 - 2164891 I e dasNov3.JH569188 579446 449 + 760995 I e colAng1.NW_012114488v1 15618559 3 - 23502949 I e canFam3.chr1 56180796 15 + 122678785 I e chlSab2.chr13 96690267 0 + 98384682 C e cerAty1.NW_012002071v1 1403581 660 + 3144229 I e nomLeu3.chr3 156310743 0 + 157873769 C e manLeu1.NW_012106474v1 8226785 56 - 10857215 I e macNem1.NW_012011000v1 8372884 1 + 10161646 I e rheMac8.chr4 170340929 22 + 172585720 I e panPan2.chr6 171802476 381 + 173848474 I a score=29495.000000 s hg38.chr6_KB021644v2_alt 112829 32 + 185823 ACCCAAGTCAGAATTC--------CCCAAGTCAGAGCTGT s panTro5.chr6 173568530 32 + 175400573 ACCCAAGTC-GAATTC-------GTCCAAGTCAGAGCTGT i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11485355 32 - 12463322 ACCCAAGTCAGAATTC--------CCCAAGTCAGAGCTGT i gorGor5.CYUI01015032v1 T 227 C 0 s nomLeu3.chr3 156310743 32 + 157873769 CCCCAGGTCAGAACTC--------CCCAGGTCAGAGCTGT i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169086281 32 - 170955103 ATCCACATCAGAACTC--------CCTAGGTCAGAGTTGT i macFas5.chr4 C 0 I 74 s calJac3.chr4 169898011 36 + 171630274 CCCCAGGTCAGAACTG----CTCCCCTAGGTCAGAGCTAC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1303335 40 - 2905041 CCCCAGGTTGTAACTGCCGCCCCCCCCAGCTTAGAATTTC i saiBol1.JH378287 C 0 C 0 e otoGar3.GL873575 10955277 732 - 12073884 I e aotNan1.NW_018494782v1 1514578 105 - 1813869 I e cebCap1.NW_016107695v1 1265824 117 - 2164891 I e dasNov3.JH569188 579446 449 + 760995 I e colAng1.NW_012114488v1 15618559 3 - 23502949 I e canFam3.chr1 56180796 15 + 122678785 I e chlSab2.chr13 96690267 0 + 98384682 C e cerAty1.NW_012002071v1 1403581 660 + 3144229 I e manLeu1.NW_012106474v1 8226785 56 - 10857215 I e macNem1.NW_012011000v1 8372884 1 + 10161646 I e rheMac8.chr4 170340929 22 + 172585720 I e panPan2.chr6 171802476 381 + 173848474 I a score=15559.000000 s hg38.chr6_KB021644v2_alt 112861 26 + 185823 CCCCCCACCCAGGTA---ACTGTCCC---------------CC--C s panTro5.chr6 173568562 26 + 175400573 CCCCCCACCCAGGTA-----CGTCCC---------------CCGAC i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11485387 25 - 12463322 -CCCCCACCCAGGTA---ACTGTCCC---------------CC--C i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156310775 29 + 157873769 CCCCCCACCCAGGTGAGAACTGCCTC---------------CC--C i nomLeu3.chr3 C 0 T 201 s macFas5.chr4 169086387 29 - 170955103 CCCCCCACCCAGGTGAGAACTGCCTC---------------CC--C i macFas5.chr4 I 74 C 0 s calJac3.chr4 169898047 24 + 171630274 ---T--CCCCAGGTTAGAACTACTCC---------------CC--T i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1303375 41 - 2905041 ---TGCCCCCAGGTTAGAACTACCTCCCATCAGAGCTGCCACC--C i saiBol1.JH378287 C 0 C 0 e otoGar3.GL873575 10955277 732 - 12073884 I e aotNan1.NW_018494782v1 1514578 105 - 1813869 I e cebCap1.NW_016107695v1 1265824 117 - 2164891 I e dasNov3.JH569188 579446 449 + 760995 I e colAng1.NW_012114488v1 15618559 3 - 23502949 I e canFam3.chr1 56180796 15 + 122678785 I e chlSab2.chr13 96690267 0 + 98384682 C e cerAty1.NW_012002071v1 1403581 660 + 3144229 I e manLeu1.NW_012106474v1 8226785 56 - 10857215 I e macNem1.NW_012011000v1 8372884 1 + 10161646 I e rheMac8.chr4 170340929 22 + 172585720 I e panPan2.chr6 171802476 381 + 173848474 I a score=29062.000000 s hg38.chr6_KB021644v2_alt 112887 19 + 185823 AGGTCAGAACTGCCTCTTC s panTro5.chr6 173568588 19 + 175400573 AGGTCAGAACTGCCTCGTC i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11485412 19 - 12463322 AGGTCAGAACTGCCTCTTC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156310603 19 + 157873769 AGGTCAGAGCTGCCTCCCC i nomLeu3.chr3 T 201 C 0 s macFas5.chr4 169086416 19 - 170955103 AGGTCAGAATTGCCCCCTC i macFas5.chr4 C 0 T 173 s calJac3.chr4 169898071 19 + 171630274 AGGTCAGAACTGCCCCCCC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1303416 19 - 2905041 AGGTCAGAATGGTCCCCCC i saiBol1.JH378287 C 0 C 0 e otoGar3.GL873575 10955277 732 - 12073884 I e aotNan1.NW_018494782v1 1514578 105 - 1813869 I e cebCap1.NW_016107695v1 1265824 117 - 2164891 I e dasNov3.JH569188 579446 449 + 760995 I e colAng1.NW_012114488v1 15618559 3 - 23502949 I e canFam3.chr1 56180796 15 + 122678785 I e chlSab2.chr13 96690267 0 + 98384682 C e cerAty1.NW_012002071v1 1403581 660 + 3144229 I e manLeu1.NW_012106474v1 8226785 56 - 10857215 I e macNem1.NW_012011000v1 8372884 1 + 10161646 I e rheMac8.chr4 170340929 22 + 172585720 I e panPan2.chr6 171802476 381 + 173848474 I a score=6617.000000 s hg38.chr6_KB021644v2_alt 112906 44 + 185823 GGGTCAGA-----ACTGCCCCC-------------CCACCCAGGTCA-GAGCTGCCCCCGCC--C---- s panTro5.chr6 173568607 47 + 175400573 GGGTCAGAGGCCGACTGCCCCT---------------ACCCGGCACAAGAGCTGCCCC-GCC--C---- i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11485431 41 - 12463322 AGGTCAG------ACTGCCCCC--------------CACCCAGGTCA-GAGCTGCCCC-CAC--C---- i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156310622 37 + 157873769 GGGTCATA-----ACTGCCCCC---------------CCCCAGGTCA-GAGCTGCCTC----------- i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169086262 22 - 170955103 -----------------------------------------AGGTCA-GAACTGCCCC-CCCATC---- i macFas5.chr4 T 173 C 0 s calJac3.chr4 169898090 53 + 171630274 AGGTGAGA-----ACTACCCCCGAGGTCAGAGCCACCACCCAGGTTA-GAACTACCCT------C---- i calJac3.chr4 C 0 T 183 s saiBol1.JH378287 1303435 40 - 2905041 AGGTTAGA-----ACGACCAC-----------------CCCAGGTTA-TAACTGCCCC------CCACC i saiBol1.JH378287 C 0 I 1 e otoGar3.GL873575 10955277 732 - 12073884 I e aotNan1.NW_018494782v1 1514578 105 - 1813869 I e cebCap1.NW_016107695v1 1265824 117 - 2164891 I e dasNov3.JH569188 579446 449 + 760995 I e colAng1.NW_012114488v1 15618559 3 - 23502949 I e canFam3.chr1 56180796 15 + 122678785 I e chlSab2.chr13 96690267 0 + 98384682 C e cerAty1.NW_012002071v1 1403581 660 + 3144229 I e manLeu1.NW_012106474v1 8226785 56 - 10857215 I e macNem1.NW_012011000v1 8372884 1 + 10161646 I e rheMac8.chr4 170340929 22 + 172585720 I e panPan2.chr6 171802476 381 + 173848474 I a score=21345.000000 s hg38.chr6_KB021644v2_alt 112950 25 + 185823 CAGGTTAGAACT-----CCCCAGGT--CAGAG s panTro5.chr6 173568654 26 + 175400573 CAGGTTAGAACT-----CCC-AGGTTCCAGAG i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11485472 25 - 12463322 CAGGTCAGAACT-----CCCCAGGT--CAGAG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156310659 12 + 157873769 ------------------CCCAGGT--CAGAA i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169086284 25 - 170955103 CACATCAGAACT-----CCCTAGGT--CAGAG i macFas5.chr4 C 0 I 4 s calJac3.chr4 169897960 28 + 171630274 CAGGTTAGAACTAAC--CCCCAGGT--CAGAG i calJac3.chr4 T 183 C 0 s saiBol1.JH378287 1303476 30 - 2905041 CCAGTTATAACTAACTTCCCCAGGT--CAGAG i saiBol1.JH378287 I 1 C 0 e otoGar3.GL873575 10955277 732 - 12073884 I e aotNan1.NW_018494782v1 1514578 105 - 1813869 I e cebCap1.NW_016107695v1 1265824 117 - 2164891 I e dasNov3.JH569188 579446 449 + 760995 I e colAng1.NW_012114488v1 15618559 3 - 23502949 I e canFam3.chr1 56180796 15 + 122678785 I e chlSab2.chr13 96690267 0 + 98384682 C e cerAty1.NW_012002071v1 1403581 660 + 3144229 I e manLeu1.NW_012106474v1 8226785 56 - 10857215 I e macNem1.NW_012011000v1 8372884 1 + 10161646 I e rheMac8.chr4 170340929 22 + 172585720 I e panPan2.chr6 171802476 381 + 173848474 I a score=11237.000000 s hg38.chr6_KB021644v2_alt 112975 29 + 185823 CTTCCTCCCCAGGTCA-AAACTGTACCCCC s panTro5.chr6 173568680 30 + 175400573 CTGCCTCCCCAGGTCGCAAACCTCGTCCCC i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11485497 27 - 12463322 CTGCCTCCCCAGGTCA-AAAC--TGTCCCC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156310671 13 + 157873769 CTGCCCCCCCA-----------------CC i nomLeu3.chr3 C 0 C 0 s calJac3.chr4 169897988 26 + 171630274 CTA-CCCCCCAGGTCA-GAGC--TACCCCC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1303506 27 - 2905041 CTGTCCCCCCAGGTCA-GAAC--TACCCCC i saiBol1.JH378287 C 0 T 239 e otoGar3.GL873575 10955277 732 - 12073884 I e aotNan1.NW_018494782v1 1514578 105 - 1813869 I e cebCap1.NW_016107695v1 1265824 117 - 2164891 I e dasNov3.JH569188 579446 449 + 760995 I e colAng1.NW_012114488v1 15618559 3 - 23502949 I e canFam3.chr1 56180796 15 + 122678785 I e chlSab2.chr13 96690267 0 + 98384682 C e cerAty1.NW_012002071v1 1403581 660 + 3144229 I e manLeu1.NW_012106474v1 8226785 56 - 10857215 I e macNem1.NW_012011000v1 8372884 1 + 10161646 I e rheMac8.chr4 170340929 22 + 172585720 I e macFas5.chr4 169086309 4 - 170955103 I e panPan2.chr6 171802476 381 + 173848474 I a score=12211.000000 s hg38.chr6_KB021644v2_alt 113004 16 + 185823 CACTGGTCAGAACTGC s panTro5.chr6 173568710 16 + 175400573 CACAGGTCAGAACTGC i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11485524 16 - 12463322 CCCAGGTCAGAACTGC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156310684 16 + 157873769 CCCAGGTCAGAGCTGC i nomLeu3.chr3 C 0 C 0 s calJac3.chr4 169898014 14 + 171630274 --CAGGTCAGAACTGC i calJac3.chr4 C 0 C 0 e otoGar3.GL873575 10955277 732 - 12073884 I e saiBol1.JH378287 1303533 239 - 2905041 T e aotNan1.NW_018494782v1 1514578 105 - 1813869 I e cebCap1.NW_016107695v1 1265824 117 - 2164891 I e dasNov3.JH569188 579446 449 + 760995 I e colAng1.NW_012114488v1 15618559 3 - 23502949 I e canFam3.chr1 56180796 15 + 122678785 I e chlSab2.chr13 96690267 0 + 98384682 C e cerAty1.NW_012002071v1 1403581 660 + 3144229 I e manLeu1.NW_012106474v1 8226785 56 - 10857215 I e macNem1.NW_012011000v1 8372884 1 + 10161646 I e rheMac8.chr4 170340929 22 + 172585720 I e macFas5.chr4 169086309 4 - 170955103 I e panPan2.chr6 171802476 381 + 173848474 I a score=12669.000000 s hg38.chr6_KB021644v2_alt 113020 25 + 185823 CCCCTGAGGTCAGAA-AGGCCC--CCCC s panTro5.chr6 173568726 27 + 175400573 CCCC-GAGGTCAGAAGACGCCCGCCCCC i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11485540 22 - 12463322 CCCC-GAGGTCAGAA-AGGC----CCCC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156310700 25 + 157873769 CCCCCAAGGTCAGAA-AGGCCC--CCCC i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169086313 25 - 170955103 TCCCTGAGGTCAGAA-GGGCCC--TCCC i macFas5.chr4 I 4 I 1 s calJac3.chr4 169898028 22 + 171630274 TCCCCTAGGTCAGA----GCTA--CTCC i calJac3.chr4 C 0 C 0 e otoGar3.GL873575 10955277 732 - 12073884 I e saiBol1.JH378287 1303533 239 - 2905041 T e aotNan1.NW_018494782v1 1514578 105 - 1813869 I e cebCap1.NW_016107695v1 1265824 117 - 2164891 I e dasNov3.JH569188 579446 449 + 760995 I e colAng1.NW_012114488v1 15618559 3 - 23502949 I e canFam3.chr1 56180796 15 + 122678785 I e chlSab2.chr13 96690267 0 + 98384682 C e cerAty1.NW_012002071v1 1403581 660 + 3144229 I e manLeu1.NW_012106474v1 8226785 56 - 10857215 I e macNem1.NW_012011000v1 8372884 1 + 10161646 I e rheMac8.chr4 170340929 22 + 172585720 I e panPan2.chr6 171802476 381 + 173848474 I a score=1746.000000 s hg38.chr6_KB021644v2_alt 113045 3 + 185823 CCA s panTro5.chr6 173568753 3 + 175400573 CCA i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11485562 3 - 12463322 CCA i gorGor5.CYUI01015032v1 C 0 C 0 s calJac3.chr4 169898050 3 + 171630274 CCA i calJac3.chr4 C 0 C 0 e otoGar3.GL873575 10955277 732 - 12073884 I e saiBol1.JH378287 1303533 239 - 2905041 T e aotNan1.NW_018494782v1 1514578 105 - 1813869 I e cebCap1.NW_016107695v1 1265824 117 - 2164891 I e dasNov3.JH569188 579446 449 + 760995 I e colAng1.NW_012114488v1 15618559 3 - 23502949 I e canFam3.chr1 56180796 15 + 122678785 I e chlSab2.chr13 96690267 0 + 98384682 C e cerAty1.NW_012002071v1 1403581 660 + 3144229 I e nomLeu3.chr3 156310725 0 + 157873769 C e manLeu1.NW_012106474v1 8226785 56 - 10857215 I e macNem1.NW_012011000v1 8372884 1 + 10161646 I e rheMac8.chr4 170340929 22 + 172585720 I e macFas5.chr4 169086338 1 - 170955103 I e panPan2.chr6 171802476 381 + 173848474 I a score=-881.000000 s hg38.chr6_KB021644v2_alt 113048 30 + 185823 -------------------GGTCAGAACTGCCC---CCCCTAGGTCAGAACT s panTro5.chr6 173568756 33 + 175400573 -------------------GGTCAGAACTGCCCCGCCACCCAAGTCAGAACT i panTro5.chr6 C 0 I 102 s gorGor5.CYUI01015032v1 11485565 10 - 12463322 -------------------GGTCAGAACT----------------------- i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156310725 19 + 157873769 -------------------GGTCAGAACGGCCC---CCCCC----------- i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169086339 10 - 170955103 -------------------GGTCAGAACT----------------------- i macFas5.chr4 I 1 C 0 s colAng1.NW_012114488v1 15618562 10 - 23502949 -------------------GGTCAGAACT----------------------- i colAng1.NW_012114488v1 I 3 C 0 s calJac3.chr4 169898053 29 + 171630274 GGTTAGAACTACTCCCCTAGGTCAGAACT----------------------- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1303294 19 - 2905041 ----------GTCCCCCCAGGTCAGTACT----------------------- i saiBol1.JH378287 T 239 C 0 e otoGar3.GL873575 10955277 732 - 12073884 I e aotNan1.NW_018494782v1 1514578 105 - 1813869 I e cebCap1.NW_016107695v1 1265824 117 - 2164891 I e dasNov3.JH569188 579446 449 + 760995 I e canFam3.chr1 56180796 15 + 122678785 I e chlSab2.chr13 96690267 0 + 98384682 C e cerAty1.NW_012002071v1 1403581 660 + 3144229 I e manLeu1.NW_012106474v1 8226785 56 - 10857215 I e macNem1.NW_012011000v1 8372884 1 + 10161646 I e rheMac8.chr4 170340929 22 + 172585720 I e panPan2.chr6 171802476 381 + 173848474 I a score=3295.000000 s hg38.chr6_KB021644v2_alt 113078 7 + 185823 GCCCCCC s gorGor5.CYUI01015032v1 11485575 7 - 12463322 GCCCCCC i gorGor5.CYUI01015032v1 C 0 C 0 s macFas5.chr4 169086349 7 - 170955103 GACCCCC i macFas5.chr4 C 0 C 0 s colAng1.NW_012114488v1 15618572 7 - 23502949 GCCCCCC i colAng1.NW_012114488v1 C 0 I 1 s calJac3.chr4 169898082 5 + 171630274 GCCCC-- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1303313 5 - 2905041 ACCCC-- i saiBol1.JH378287 C 0 C 0 e otoGar3.GL873575 10955277 732 - 12073884 I e aotNan1.NW_018494782v1 1514578 105 - 1813869 I e cebCap1.NW_016107695v1 1265824 117 - 2164891 I e dasNov3.JH569188 579446 449 + 760995 I e canFam3.chr1 56180796 15 + 122678785 I e chlSab2.chr13 96690267 0 + 98384682 C e cerAty1.NW_012002071v1 1403581 660 + 3144229 I e nomLeu3.chr3 156310744 0 + 157873769 C e manLeu1.NW_012106474v1 8226785 56 - 10857215 I e macNem1.NW_012011000v1 8372884 1 + 10161646 I e rheMac8.chr4 170340929 22 + 172585720 I e panPan2.chr6 171802476 381 + 173848474 I e panTro5.chr6 173568789 102 + 175400573 I a score=273.000000 s hg38.chr6_KB021644v2_alt 113085 1 + 185823 A s gorGor5.CYUI01015032v1 11485582 1 - 12463322 A i gorGor5.CYUI01015032v1 C 0 C 0 s colAng1.NW_012114488v1 15618580 1 - 23502949 A i colAng1.NW_012114488v1 I 1 C 0 e otoGar3.GL873575 10955277 732 - 12073884 I e saiBol1.JH378287 1303318 0 - 2905041 C e aotNan1.NW_018494782v1 1514578 105 - 1813869 I e cebCap1.NW_016107695v1 1265824 117 - 2164891 I e calJac3.chr4 169898087 0 + 171630274 C e dasNov3.JH569188 579446 449 + 760995 I e canFam3.chr1 56180796 15 + 122678785 I e chlSab2.chr13 96690267 0 + 98384682 C e cerAty1.NW_012002071v1 1403581 660 + 3144229 I e nomLeu3.chr3 156310744 0 + 157873769 C e manLeu1.NW_012106474v1 8226785 56 - 10857215 I e macNem1.NW_012011000v1 8372884 1 + 10161646 I e rheMac8.chr4 170340929 22 + 172585720 I e macFas5.chr4 169086356 0 - 170955103 C e panPan2.chr6 171802476 381 + 173848474 I e panTro5.chr6 173568789 102 + 175400573 I a score=42233.000000 s hg38.chr6_KB021644v2_alt 113086 37 + 185823 CCCAAGTCAGAACT---CCCCAAGTCAGAGCTGTCCCCCC s gorGor5.CYUI01015032v1 11485583 37 - 12463322 CCCAAGTCAGAACT---CCCCAAGTCAGAGCTGTCCCCCC i gorGor5.CYUI01015032v1 C 0 T 228 s nomLeu3.chr3 156310744 37 + 157873769 CCCAGGTCAGAACT---CCCCAGGTCAGAGCTGTCCCCCC i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169086356 37 - 170955103 CCCAGGTCAGAACT---CCCCAGGTCAGAGCTGTCCCCCC i macFas5.chr4 C 0 C 0 s colAng1.NW_012114488v1 15618581 31 - 23502949 CCCACGTCAGAACT---CCCTAGGTCAGAGTTGT------ i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169898087 40 + 171630274 CCCAGGTGAGAACTACCCCCGAGGTCAGAGCCACCACCCA i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1303318 38 - 2905041 CCCAGGTTAGAGCTACCCCCCAGGTTGTAACTGCCGCC-- i saiBol1.JH378287 C 0 C 0 e otoGar3.GL873575 10955277 732 - 12073884 I e aotNan1.NW_018494782v1 1514578 105 - 1813869 I e cebCap1.NW_016107695v1 1265824 117 - 2164891 I e dasNov3.JH569188 579446 449 + 760995 I e canFam3.chr1 56180796 15 + 122678785 I e chlSab2.chr13 96690267 0 + 98384682 C e cerAty1.NW_012002071v1 1403581 660 + 3144229 I e manLeu1.NW_012106474v1 8226785 56 - 10857215 I e macNem1.NW_012011000v1 8372884 1 + 10161646 I e rheMac8.chr4 170340929 22 + 172585720 I e panPan2.chr6 171802476 381 + 173848474 I e panTro5.chr6 173568789 102 + 175400573 I a score=3646.000000 s hg38.chr6_KB021644v2_alt 113123 14 + 185823 ACCCAGTT---AACTCT s gorGor5.CYUI01015032v1 11485392 14 - 12463322 ACCCAGGT---AACTGT i gorGor5.CYUI01015032v1 T 228 C 0 s nomLeu3.chr3 156310781 17 + 157873769 ACCCAGGTGAGAACTGC i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169086393 17 - 170955103 ACCCAGGTGAGAACTGC i macFas5.chr4 C 0 C 0 s calJac3.chr4 169898127 11 + 171630274 -----GGTTAGAACTA- i calJac3.chr4 C 0 C 0 e otoGar3.GL873575 10955277 732 - 12073884 I e saiBol1.JH378287 1303356 0 - 2905041 C e aotNan1.NW_018494782v1 1514578 105 - 1813869 I e cebCap1.NW_016107695v1 1265824 117 - 2164891 I e dasNov3.JH569188 579446 449 + 760995 I e colAng1.NW_012114488v1 15618612 0 - 23502949 C e canFam3.chr1 56180796 15 + 122678785 I e chlSab2.chr13 96690267 0 + 98384682 C e cerAty1.NW_012002071v1 1403581 660 + 3144229 I e manLeu1.NW_012106474v1 8226785 56 - 10857215 I e macNem1.NW_012011000v1 8372884 1 + 10161646 I e rheMac8.chr4 170340929 22 + 172585720 I e panPan2.chr6 171802476 381 + 173848474 I e panTro5.chr6 173568789 102 + 175400573 I a score=29268.000000 s hg38.chr6_KB021644v2_alt 113137 22 + 185823 CCCCCCAGGTCAGAAC------TGCC-CC s panTro5.chr6 173568891 28 + 175400573 CCCCCCAGGTCAGAACAGCCACTCCC-CC i panTro5.chr6 I 102 C 0 s gorGor5.CYUI01015032v1 11485406 22 - 12463322 CCCCCCAGGTCAGAAC------TGCC-TC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156310798 22 + 157873769 CTCCCCAGGTCAGAAT------TGCC-CC i nomLeu3.chr3 C 0 T 161 s macFas5.chr4 169086410 22 - 170955103 CTCCCCAGGTCAGAAT------TGCC-CC i macFas5.chr4 C 0 T 76 s calJac3.chr4 169898138 22 + 171630274 CCCTCCAGGTCAGAAC------TGCC-CC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1303356 23 - 2905041 CCCCCCAGCTTAGAAT------TTCTGCC i saiBol1.JH378287 C 0 C 0 e otoGar3.GL873575 10955277 732 - 12073884 I e aotNan1.NW_018494782v1 1514578 105 - 1813869 I e cebCap1.NW_016107695v1 1265824 117 - 2164891 I e dasNov3.JH569188 579446 449 + 760995 I e colAng1.NW_012114488v1 15618612 0 - 23502949 C e canFam3.chr1 56180796 15 + 122678785 I e chlSab2.chr13 96690267 0 + 98384682 C e cerAty1.NW_012002071v1 1403581 660 + 3144229 I e manLeu1.NW_012106474v1 8226785 56 - 10857215 I e macNem1.NW_012011000v1 8372884 1 + 10161646 I e rheMac8.chr4 170340929 22 + 172585720 I e panPan2.chr6 171802476 381 + 173848474 I a score=10002.000000 s hg38.chr6_KB021644v2_alt 113159 10 + 185823 ACCATGTCAG s panTro5.chr6 173568919 10 + 175400573 CCCAGGTCAG i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11485428 10 - 12463322 TTCAGGTCAG i gorGor5.CYUI01015032v1 C 0 I 182 s nomLeu3.chr3 156310659 10 + 157873769 CCCAGGTCAG i nomLeu3.chr3 T 161 C 0 s calJac3.chr4 169898160 10 + 171630274 CCCAGGCCAG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1303379 10 - 2905041 CCCAGGTTAG i saiBol1.JH378287 C 0 C 0 e otoGar3.GL873575 10955277 732 - 12073884 I e aotNan1.NW_018494782v1 1514578 105 - 1813869 I e cebCap1.NW_016107695v1 1265824 117 - 2164891 I e dasNov3.JH569188 579446 449 + 760995 I e colAng1.NW_012114488v1 15618612 0 - 23502949 C e canFam3.chr1 56180796 15 + 122678785 I e chlSab2.chr13 96690267 0 + 98384682 C e cerAty1.NW_012002071v1 1403581 660 + 3144229 I e manLeu1.NW_012106474v1 8226785 56 - 10857215 I e macNem1.NW_012011000v1 8372884 1 + 10161646 I e rheMac8.chr4 170340929 22 + 172585720 I e macFas5.chr4 169086432 76 - 170955103 T e panPan2.chr6 171802476 381 + 173848474 I a score=4768.000000 s hg38.chr6_KB021644v2_alt 113169 11 + 185823 AACTGTCCCCC s panTro5.chr6 173568929 8 + 175400573 AAC---GCCCC i panTro5.chr6 C 0 C 0 s nomLeu3.chr3 156310669 11 + 157873769 AACTGCCCCCC i nomLeu3.chr3 C 0 I 2 s calJac3.chr4 169898170 11 + 171630274 AGCTACCCCCC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1303389 11 - 2905041 AACTACCTCCC i saiBol1.JH378287 C 0 C 0 e otoGar3.GL873575 10955277 732 - 12073884 I e aotNan1.NW_018494782v1 1514578 105 - 1813869 I e cebCap1.NW_016107695v1 1265824 117 - 2164891 I e dasNov3.JH569188 579446 449 + 760995 I e colAng1.NW_012114488v1 15618612 0 - 23502949 C e canFam3.chr1 56180796 15 + 122678785 I e chlSab2.chr13 96690267 0 + 98384682 C e cerAty1.NW_012002071v1 1403581 660 + 3144229 I e manLeu1.NW_012106474v1 8226785 56 - 10857215 I e macNem1.NW_012011000v1 8372884 1 + 10161646 I e rheMac8.chr4 170340929 22 + 172585720 I e gorGor5.CYUI01015032v1 11485438 182 - 12463322 I e macFas5.chr4 169086432 76 - 170955103 T e panPan2.chr6 171802476 381 + 173848474 I a score=6714.000000 s hg38.chr6_KB021644v2_alt 113180 21 + 185823 GACCCAGGTCAGA----------------GCTACCCC s panTro5.chr6 173568937 37 + 175400573 CACCCAGGTCAGAACTCCCCATGGTCAGAGCTGCCCC i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11485620 21 - 12463322 CACCCAGGTCAGA----------------GCTGCCCC i gorGor5.CYUI01015032v1 I 182 C 0 s nomLeu3.chr3 156310682 19 + 157873769 CCCCCAGGTCAGA----------------GCTGCC-- i nomLeu3.chr3 I 2 C 0 s calJac3.chr4 169898181 14 + 171630274 ----CAGGTTAGA----------------ACTAC--- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1303400 11 - 2905041 -------ATCAGA----------------GCTGC--- i saiBol1.JH378287 C 0 C 0 e otoGar3.GL873575 10955277 732 - 12073884 I e aotNan1.NW_018494782v1 1514578 105 - 1813869 I e cebCap1.NW_016107695v1 1265824 117 - 2164891 I e dasNov3.JH569188 579446 449 + 760995 I e colAng1.NW_012114488v1 15618612 0 - 23502949 C e canFam3.chr1 56180796 15 + 122678785 I e chlSab2.chr13 96690267 0 + 98384682 C e cerAty1.NW_012002071v1 1403581 660 + 3144229 I e manLeu1.NW_012106474v1 8226785 56 - 10857215 I e macNem1.NW_012011000v1 8372884 1 + 10161646 I e rheMac8.chr4 170340929 22 + 172585720 I e macFas5.chr4 169086432 76 - 170955103 T e panPan2.chr6 171802476 381 + 173848474 I a score=910.000000 s hg38.chr6_KB021644v2_alt 113201 1 + 185823 T s panTro5.chr6 173568974 1 + 175400573 T i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11485641 1 - 12463322 T i gorGor5.CYUI01015032v1 C 0 C 0 s manLeu1.NW_012106474v1 8226841 1 - 10857215 T i manLeu1.NW_012106474v1 I 56 C 0 s colAng1.NW_012114488v1 15618612 1 - 23502949 T i colAng1.NW_012114488v1 C 0 C 0 e otoGar3.GL873575 10955277 732 - 12073884 I e saiBol1.JH378287 1303411 0 - 2905041 C e aotNan1.NW_018494782v1 1514578 105 - 1813869 I e cebCap1.NW_016107695v1 1265824 117 - 2164891 I e calJac3.chr4 169898195 0 + 171630274 C e dasNov3.JH569188 579446 449 + 760995 I e canFam3.chr1 56180796 15 + 122678785 I e chlSab2.chr13 96690267 0 + 98384682 C e cerAty1.NW_012002071v1 1403581 660 + 3144229 I e nomLeu3.chr3 156310701 0 + 157873769 C e macNem1.NW_012011000v1 8372884 1 + 10161646 I e rheMac8.chr4 170340929 22 + 172585720 I e macFas5.chr4 169086432 76 - 170955103 T e panPan2.chr6 171802476 381 + 173848474 I a score=25781.000000 s hg38.chr6_KB021644v2_alt 113202 18 + 185823 CCCCCAGGT-CAGAACAGC s panTro5.chr6 173568975 19 + 175400573 CCCCCAGGTTCAGAACAGC i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11485642 18 - 12463322 CCCCCAGGT-CAGAACAGC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156310701 18 + 157873769 CCCCAAGGT-CAGAAAGGC i nomLeu3.chr3 C 0 C 0 s chlSab2.chr13 96690267 17 + 98384682 CCCCCAGGT-CAGAACTG- i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8226842 17 - 10857215 CCCCGAGGT-CAGAAAGG- i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15618613 17 - 23502949 CCCCGAGGT-CAGAAAGG- i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169898195 15 + 171630274 CTCCCA--T-CAGAGCTG- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1303411 17 - 2905041 CACCCAGGT-CAGAATGG- i saiBol1.JH378287 C 0 C 0 e otoGar3.GL873575 10955277 732 - 12073884 I e aotNan1.NW_018494782v1 1514578 105 - 1813869 I e cebCap1.NW_016107695v1 1265824 117 - 2164891 I e dasNov3.JH569188 579446 449 + 760995 I e canFam3.chr1 56180796 15 + 122678785 I e cerAty1.NW_012002071v1 1403581 660 + 3144229 I e macNem1.NW_012011000v1 8372884 1 + 10161646 I e rheMac8.chr4 170340929 22 + 172585720 I e macFas5.chr4 169086432 76 - 170955103 T e panPan2.chr6 171802476 381 + 173848474 I a score=20611.000000 s hg38.chr6_KB021644v2_alt 113220 6 + 185823 CCCCCC s panTro5.chr6 173568994 6 + 175400573 CCCCCC i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11485660 6 - 12463322 CCCCCC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156310719 6 + 157873769 CCCCCC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170340951 6 + 172585720 CCCTCC i rheMac8.chr4 I 22 C 0 s chlSab2.chr13 96690284 6 + 98384682 CCCCCC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8226859 6 - 10857215 CCCTCC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15618630 6 - 23502949 CCCCCC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169898210 6 + 171630274 CCACCT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1303428 6 - 2905041 TCCCCC i saiBol1.JH378287 C 0 C 0 e otoGar3.GL873575 10955277 732 - 12073884 I e aotNan1.NW_018494782v1 1514578 105 - 1813869 I e cebCap1.NW_016107695v1 1265824 117 - 2164891 I e dasNov3.JH569188 579446 449 + 760995 I e canFam3.chr1 56180796 15 + 122678785 I e cerAty1.NW_012002071v1 1403581 660 + 3144229 I e macNem1.NW_012011000v1 8372884 1 + 10161646 I e macFas5.chr4 169086432 76 - 170955103 T e panPan2.chr6 171802476 381 + 173848474 I a score=-7190.000000 s hg38.chr6_KB021644v2_alt 113226 2 + 185823 C------------------------A s panTro5.chr6 173569000 26 + 175400573 CCAGGTCAGAAAGCCCCCCCCACCCA i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11485666 2 - 12463322 C------------------------A i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170340957 2 + 172585720 ------------------------CA i rheMac8.chr4 C 0 C 0 s chlSab2.chr13 96690290 2 + 98384682 ------------------------TA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8226865 2 - 10857215 ------------------------CA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15618636 2 - 23502949 ------------------------CA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169898216 2 + 171630274 ------------------------CA i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1303434 2 - 2905041 ------------------------CA i saiBol1.JH378287 C 0 C 0 e otoGar3.GL873575 10955277 732 - 12073884 I e aotNan1.NW_018494782v1 1514578 105 - 1813869 I e cebCap1.NW_016107695v1 1265824 117 - 2164891 I e dasNov3.JH569188 579446 449 + 760995 I e canFam3.chr1 56180796 15 + 122678785 I e cerAty1.NW_012002071v1 1403581 660 + 3144229 I e nomLeu3.chr3 156310725 0 + 157873769 C e macNem1.NW_012011000v1 8372884 1 + 10161646 I e macFas5.chr4 169086432 76 - 170955103 T e panPan2.chr6 171802476 381 + 173848474 I a score=9000.000000 s hg38.chr6_KB021644v2_alt 113228 2 + 185823 GG s panTro5.chr6 173569026 2 + 175400573 GG i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11485668 2 - 12463322 GG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156310725 2 + 157873769 GG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170340959 2 + 172585720 GG i rheMac8.chr4 C 0 C 0 s chlSab2.chr13 96690292 2 + 98384682 GG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8226867 2 - 10857215 GG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15618638 2 - 23502949 GG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169898218 2 + 171630274 GG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1303436 2 - 2905041 GG i saiBol1.JH378287 C 0 C 0 e otoGar3.GL873575 10955277 732 - 12073884 I e aotNan1.NW_018494782v1 1514578 105 - 1813869 I e cebCap1.NW_016107695v1 1265824 117 - 2164891 I e dasNov3.JH569188 579446 449 + 760995 I e canFam3.chr1 56180796 15 + 122678785 I e cerAty1.NW_012002071v1 1403581 660 + 3144229 I e macNem1.NW_012011000v1 8372884 1 + 10161646 I e macFas5.chr4 169086432 76 - 170955103 T e panPan2.chr6 171802476 381 + 173848474 I a score=11608.000000 s hg38.chr6_KB021644v2_alt 113230 16 + 185823 TCAGAACGG-CCCCC-CA s panTro5.chr6 173569028 16 + 175400573 TCAGAACGG-CCCCT-CA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171802857 16 + 173848474 TCAGAACGG-CCCCT-CA i panPan2.chr6 I 381 C 0 s gorGor5.CYUI01015032v1 11485670 16 - 12463322 TCAGAACGG-CCCCC-CA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156310727 17 + 157873769 TCAGAACGGCCCCCC-CC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170340961 15 + 172585720 TCAGAACTG-ACCCCC-- i rheMac8.chr4 C 0 C 0 s chlSab2.chr13 96690294 13 + 98384682 CCAGAAAGG--TCCC--- i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8226869 14 - 10857215 TCAGAACTG-CCCCC--- i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15618640 14 - 23502949 TCAGAACTG-TCCCA--- i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169898220 13 + 171630274 TCAGAATGG-TCCC---- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1303438 8 - 2905041 TTAGAACG---------- i saiBol1.JH378287 C 0 C 0 e otoGar3.GL873575 10955277 732 - 12073884 I e aotNan1.NW_018494782v1 1514578 105 - 1813869 I e cebCap1.NW_016107695v1 1265824 117 - 2164891 I e dasNov3.JH569188 579446 449 + 760995 I e canFam3.chr1 56180796 15 + 122678785 I e cerAty1.NW_012002071v1 1403581 660 + 3144229 I e macNem1.NW_012011000v1 8372884 1 + 10161646 I e macFas5.chr4 169086432 76 - 170955103 T a score=7960.000000 s hg38.chr6_KB021644v2_alt 113246 3 + 185823 CCC- s panTro5.chr6 173569044 3 + 175400573 CCC- i panTro5.chr6 C 0 C 0 s panPan2.chr6 171802873 3 + 173848474 CCC- i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11485686 3 - 12463322 CCC- i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156310744 3 + 157873769 CCC- i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170340976 2 + 172585720 -CC- i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169086356 3 - 170955103 CCC- i macFas5.chr4 T 76 C 0 s chlSab2.chr13 96690307 2 + 98384682 -CC- i chlSab2.chr13 C 0 I 1 s manLeu1.NW_012106474v1 8226883 2 - 10857215 -CC- i manLeu1.NW_012106474v1 C 0 I 1 s colAng1.NW_012114488v1 15618654 3 - 23502949 CCC- i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169898233 3 + 171630274 -CCC i calJac3.chr4 C 0 C 0 e otoGar3.GL873575 10955277 732 - 12073884 I e saiBol1.JH378287 1303446 0 - 2905041 C e aotNan1.NW_018494782v1 1514578 105 - 1813869 I e cebCap1.NW_016107695v1 1265824 117 - 2164891 I e dasNov3.JH569188 579446 449 + 760995 I e canFam3.chr1 56180796 15 + 122678785 I e cerAty1.NW_012002071v1 1403581 660 + 3144229 I e macNem1.NW_012011000v1 8372884 1 + 10161646 I a score=201003.000000 s hg38.chr6_KB021644v2_alt 113249 35 + 185823 AGGTCAGAACT-----CCCCAGGTCAAAGCTGTCCCCCCA s panTro5.chr6 173569047 35 + 175400573 AGGTCAGAACT-----CCCCAGGTCAGAGCTGTCCCCCCA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171802876 35 + 173848474 AGGTCAGAACT-----CCCCAGGTCAGAGCTGTCCCCCCA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11485689 35 - 12463322 AGGTCAGAACT-----CCCCAGGTCAGAGCTGTCCCCCCA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156310747 35 + 157873769 AGGTCAGAACT-----CCCCAGGTCAGAGCTGTCCCCCCA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170340978 35 + 172585720 AGGTCAGAACT-----CCCCAGGTCAGAGCTGTCCCCCCA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169086359 35 - 170955103 AGGTCAGAACT-----CCCCAGGTCAGAGCTGTCCCCCCA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8372885 35 + 10161646 AGGTCAGAACT-----CCCCAGGTCAGAGCTGTCCCCCCA i macNem1.NW_012011000v1 I 1 C 0 s chlSab2.chr13 96690310 40 + 98384682 AGGTCAGAACTGTCCACCCCAGGTCAGAGCTGTCCCCCAA i chlSab2.chr13 I 1 C 0 s manLeu1.NW_012106474v1 8226886 35 - 10857215 AGGTCAGAACT-----CCCCAGGTCAGAGCTGTCCCCCCA i manLeu1.NW_012106474v1 I 1 C 0 s colAng1.NW_012114488v1 15618657 35 - 23502949 AGGTCAGAACT-----CCCCAGGTCAGAGCTGTCCCTCCA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169898236 39 + 171630274 AGGTTAGAACT-ACCACCCCAGGTTGTAACTACCCCCCCA i calJac3.chr4 C 0 I 21 s saiBol1.JH378287 1303446 26 - 2905041 ------------ACCACCCCAGGTTATAACTGCCCCCC-- i saiBol1.JH378287 C 0 I 22 e otoGar3.GL873575 10955277 732 - 12073884 I e aotNan1.NW_018494782v1 1514578 105 - 1813869 I e cebCap1.NW_016107695v1 1265824 117 - 2164891 I e dasNov3.JH569188 579446 449 + 760995 I e canFam3.chr1 56180796 15 + 122678785 I e cerAty1.NW_012002071v1 1403581 660 + 3144229 I a score=140114.000000 s hg38.chr6_KB021644v2_alt 113284 18 + 185823 CCCAGGTGAGAACTGCCT s panTro5.chr6 173569082 18 + 175400573 CCCAGGTGAGAACTGCCT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171802911 18 + 173848474 CCCAGGTGAGAACTGCCT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11485724 18 - 12463322 CCCAGGTGAGAACTGCCT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156310782 18 + 157873769 CCCAGGTGAGAACTGCCT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170341013 18 + 172585720 CCCAGGTGAGAACTGCCT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169086394 18 - 170955103 CCCAGGTGAGAACTGCCT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8372920 18 + 10161646 CCCAGGTGAGAACTGCCT i macNem1.NW_012011000v1 C 0 C 0 s chlSab2.chr13 96690350 18 + 98384682 CCCAGGTGAGAACTGCCC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8226921 18 - 10857215 CCCAGGTGAGAACTGCCT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15618692 18 - 23502949 CCCAGGTGAGAACTGCCT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169898296 18 + 171630274 CCCAGGTCAGAGCTGCCC i calJac3.chr4 I 21 C 0 s saiBol1.JH378287 1303494 18 - 2905041 CCCAGGTCAGAGCTGTCC i saiBol1.JH378287 I 22 C 0 s aotNan1.NW_018494782v1 1514683 18 - 1813869 CCCAGGTCAGAGCTGCCC i aotNan1.NW_018494782v1 I 105 C 0 e otoGar3.GL873575 10955277 732 - 12073884 I e cebCap1.NW_016107695v1 1265824 117 - 2164891 I e dasNov3.JH569188 579446 449 + 760995 I e canFam3.chr1 56180796 15 + 122678785 I e cerAty1.NW_012002071v1 1403581 660 + 3144229 I a score=10500.000000 s hg38.chr6_KB021644v2_alt 113302 1 + 185823 C s panTro5.chr6 173569100 1 + 175400573 C i panTro5.chr6 C 0 C 0 s panPan2.chr6 171802929 1 + 173848474 C i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11485742 1 - 12463322 C i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156310800 1 + 157873769 C i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170341031 1 + 172585720 C i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169086412 1 - 170955103 C i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8372938 1 + 10161646 C i macNem1.NW_012011000v1 C 0 C 0 s chlSab2.chr13 96690368 1 + 98384682 C i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8226939 1 - 10857215 C i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15618710 1 - 23502949 C i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169898314 1 + 171630274 C i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1303512 1 - 2905041 C i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1265941 1 - 2164891 C i cebCap1.NW_016107695v1 I 117 C 0 s aotNan1.NW_018494782v1 1514701 1 - 1813869 C i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10955277 732 - 12073884 I e dasNov3.JH569188 579446 449 + 760995 I e canFam3.chr1 56180796 15 + 122678785 I e cerAty1.NW_012002071v1 1403581 660 + 3144229 I a score=2171715.000000 s hg38.chr6_KB021644v2_alt 113303 297 + 185823 CCCAGGTCAGAATTGCCCCCACTCCACCTCCAGGACATGGCCCAGCCACTTGTGGATAAGCATC--------------------------------ATGGGGACGGAAGAGAGGATGG-AAAGTGAGA---------AGACGGGTGGGAAAGTCAGACAGGCCAGCCTCAGGCCCCTCCCATGGCTTCGAGAACTTGGACCCTGCAGGTTCCCTACCAGGGCTGCTGTGCC--TACTGGACACGTTTTGCTTGGCCAGG--------------------CC-TGCGT---GGAGTGGGGACTCCCTGC--------------------CCATCCTGCAGCAGGAACGCAG-TCATA-----------ATTCATCCTGCAGTTACAATTTAGCAAGTA s panTro5.chr6 173569101 317 + 175400573 CCCAGGTCAGAATTGCCCCCACTCCACCTCCAGGACATGGCCCAGCCACTTGTGGATAAGCATC--------------------------------ATGGGGACAGAAGAGAGGATGG-AAAGTGAGA---------AGATGGGTGGGAAAGTCAGACAGGCCGGCCTCAGGCCCCTCCCATGGCTTCGAGAACTTGGACCCTGCAGGTTCCCTACCAGGGCTGCTGTGCC--TACTGGACAGGTTTTGCTTGGCCAGG--------------------CC-TGCGT---GGAGTGGGGACTCCCTGCGTGGAGTGGGGACTCCCTGCCCATCCTGCAGCAGGAACGCAG-TCATA-----------ATTCATCCTGCAGTTACAATTTACCAAGTA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171802930 317 + 173848474 CCCAGGTCAGAATTGCCCCCACTCCACCTCCAGGACATGGCCCAGCCACTTGTGGATAAGCATC--------------------------------ATGGGGACAGAAGAGAGGATGG-AAAGTGAGA---------AGACGGGTGGGAAAGTCAGACAGGCCAGCCTCAGGCCCCTCCCATGGCTTCGAGAACTTGGACCCTGCAGGTTCCCTACCAGGGCTGCTGTGCC--TACTGGACAGGTTTTGCTTGGCCAGG--------------------CC-TGCGT---GGAGTGGGGACTCCCTGCGTGGAGTGGGGACTCCCTGCCCATCCTGCAGCAGGAACGCAG-TCATA-----------ATTCATCCTGCAGTTACAATTTACCAAGTA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11485743 297 - 12463322 CCCAGGTCAGAATTGCCCCCACTCCACCTCCAGGACATGGCCCAGCCACTTGTGGATAAACATC--------------------------------ATGGGGACAGAAGAGAGGATGG-AAAGTGAGA---------AGACGGGTGGGAAAGTCAGACAGGCCGGCCTCAGGCCCCTCCCATGGCTTCGGGAACTTGGACCCTGCAGGTTCCCTCCCAGGGCTGCTGTGCC--TACTGGACATGTTTTGCTTGGCCAGG--------------------CC-TGCGT---GGAGTGGGGACTCCCTGC--------------------CCATCCTGCAGCAGGAACGCAG-TCGTA-----------ATTCATCCTGCAGTTACAATTTAGCAAGTA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156310801 295 + 157873769 CCCAGGTCAGAATTGCCCCCACTCCACCTCCAGGACGTGGCCCAGCCACTTGTGGATAAGCATC--------------------------------ACGGGGACAGAAGAGAGGATGG-AAAGTGAGA---------AGATGGGTGGGAAAGTCAGACAGGACGGCCTCAGGCCCCTCCCATGGCTTCGGGAGCTTGGACCCCGCAGGATCCCCCCCACGGCTGCTGTGCC--TACTGGACACATTTTGCTTGGCCAGG--------------------CC-TGCGTGAAGAAGTGGGGACTCCCTGCATGGAGT--------------------------GGAACGCAGTTCGTA-----------ATTCATCCTGCAGTTAGAATTTAGCAAGTA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170341032 316 + 172585720 CCCAGGTCAGAATTGCCCCCTCTCCACCTATGGGACGTGGCCCAGCCTCTTGTGGATAAGCATG--------------------------------GTGGGGACGGAAGAGCGGATGGAAAAGTGAGA---------AGACGGGT-GGAAAGTCAGACAGGCCGGCCTCAGGCCCGTCCCATGGCTTCGGGAGCTTGGTCCCTGCAGGTTCCCT-CCAGGGCTGCTACGCC--TACTGGACACGGTTTGCTTGGCCAGG--------------------CC-TGCGT---GGAGTGGGGACTCCCTGCGTGGAGTGGGGCTTTCCTGCCCATCCTGCAGCACAAACCCAG-TCATA-----------GTTCATCCTGCAGTTACAATTTAGCAAGTA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169086413 316 - 170955103 CCCAGGTCAGAATTGCCCCCTCTCCACCTACGGGACGTGGCCCAGCCTCTTGTGGATAAGCATG--------------------------------GTGGGGACGGAAGAGCGGATGGAAAAGTGAGA---------AGACGGGT-GGAAAGTCAGACAGGCCGGCCTCAGGCCCGTCCCATGGCTTCGGGAGCTTGGTCCCTGCAGGTTCCCT-CCAGGGCTGCTACGCC--TACTGGACACGGTTTGCTTGGCCAGG--------------------CC-TGCGT---GGAGTGGGGACTCCCTGCGTGGAGTGGGGATTTCCTGCCCATGCTGCAGCACAAACCCAG-TCATA-----------GTTCATCCTGCAGTTACAATTTAGCAAGTA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8372939 336 + 10161646 CCCAGGTCAGAATTGCCCCCTCTCCACCTACGGGACGTGGCCCAGCCTCTTGTGGATAAGCATG--------------------------------GTGGGGACGGAAGAGCGGATGGAAAAGTGAGA---------AGACGGGT-GGAAAGTCAGACAGGCCGGCCTCAGGCCCGTCCCATGGCTTCGGGAGCTTGGTCCCTGCAGGTTCCCT-CCAGGGCTGCTACGCC--TACTGGACACGGTTTGCTTGGCCAGGCCTGCGTGGAGTGGGGACTCCC-TGCGT---GGAGTGGGGACTCCCTGCGTGGAGTGGGGATTTCCTGCCCATCCTGCAGCACAAACCCAG-TCATA-----------GTTCATCCTGCAGTTACAATTTAGCAAGTA i macNem1.NW_012011000v1 C 0 C 0 s chlSab2.chr13 96690369 336 + 98384682 CCCAGGTCAGAATTGCCCCCGCTCCACCTACAGGATGTGGCCCAGCCTCTTGTGGATAAGCATC--------------------------------GTGGGGACAGAAGAGCAGATGG-AAAGTGAGA---------AGATGGGT-GGAAAGTCAGACAGGCCGGCCTCAGGCCCCTCCCATGGCTTTGGGAGCTTGGTCCCTGCAGGTTCCCTCCCAGGGCTGCTGCGCC--TACTGGACACAGTTTGCTTGGCCAGGCCTGCGTCGAGTGGGGACTCCC-TGCGT---GGAGTGGGGACTCCCTGTGTGGAGTGGGGATTCCCTGCCCATCCTGCAGCACAAACCCAG-TTGTA-----------GTTCATCCTGCAGTTACAATTTAGCAAGTA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8226940 316 - 10857215 CCCAGGTCAGAATTGCCCACACTCCACCTACAGGATGTGGCCCAGCCTCTTGTGGATAAGCATC--------------------------------GTGGGGACAGAAGAGCAGATGG-AAAGTGAGA---------AGATGGGT-GGAAAGTCAGACAGGCCGGCCTCAGGCCCCTCCCATGGCTTCGGGAGCTTGGTCCCTGCAGGTTCCCTCCCAGGGCTGCTGTGCC--TACTGGACATGGTTTGCTTGGCCAGG--------------------CC-TGCGT---GGAGTGGGGACTCCCTGCGTGGAGTGGGGATTTCCTGCCCATCCTGCAGCACAAACCCAG-TCGTA-----------GTTCATCCTGCAGTTACAATTTAGCAAGTA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15618711 316 - 23502949 CCCAGGTCAGAATTGCCCCCACTCCACCTACAGGACGTGGCCCAGCCTCCTGTGGATAAGCATC--------------------------------GTGGGGACAGAAGAGCGGATGG-AAAGTGAGA---------AGATGGGTGGGAAAGTCAGACAGGCCGGCCTCAGGCCCCTCCCATGGCTTCGGGAGCTTGGACCCTGCGGGTTCCCTCTCAGGGCTGCTGCGCC--TACCGGACACGGTTTGCTTGGCCAGG--------------------CC-TGCGT---CGAGTGGGGACTCCCTGCGTGGAGTGGGGACTCCCTGCCCAT-CTGCAGCACAAACCCAG-TCATA-----------GTTCACCCTGCAGTTACAATTTAGCAAGTA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169898315 287 + 171630274 CCCAGGTCAGAACTACCCCCTCTCCACCTCCAGGACGTGGCTCAGCCACTTGTGGATAAGCATG--------------------------------GTGGGGACAGAAGAGCTGATG--AAAGTGAGA---------AGATGGGT-GGGAAGTCAGACAGGACAGCCTCAGGTCC-TCCTGTGGCTTTGGGAGCTTGAGCCCTGCAGGTTTTTC-CTGGGGCTG-TGCACC--TACTGGACACGTTTTGCTTGGCCAGG--------------------CC-TGTGT---GGAGTGGCCATTCCCTGC--------------------CCA-CCTGCGGCAGGAGC-CCT-TTGCA-----------ATTCATCTG--AGCTACAATTTAGCAAGT- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1303513 286 - 2905041 CCCAGGTCAGAACTACCCCCGCTCCACCTCTCGGACATGGCTCAGCCACTTGTGGATAAGCATG--------------------------------GTGGGGACAGAAGAGCTGATG--AAAGTGAGA---------ACATGGGT-GGAAAGTCAGACAGGACAGCCTCAGGTCC-TCCTGTGGCTCTGGGATCCTGGGCCCTGCAGGTGCTCC-CTGGGGCTG-TGCACC--TACTGGACACGTTTTGCTTGGCCAGG--------------------CC-TGCG----GGAGCGGGGATTCCCCG---------------------CCA-CCTGCAGCAGGAGCGCCC-TCAAA-----------ATTCAGCTG--AGTTACAATTTAGCATTT- i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1265942 283 - 2164891 CCCAGGTCAGAGCTGCCCCCGCTCCACCTCCAGGACGTGGCTCAGCCACTTGTGGATAAGCATG--------------------------------GTGGGGACAGAAGTGCTGATG--AAAGTGAGA---------ACATGGGT-GGAAAGT----TAGGACAGCCTCAGGTCC-TCCTGTGGCTGTGGGAGCTTGGGCCCTGCAGGTTTTCC-CTGGGGCTG-TGCACC--TACTGGACACGTTTTGCTTGGCCAGG--------------------CC-TGCG----GGAGCAGGGATTCCCCGC--------------------CCA-CCTGCAGCAGGAGCGCCC-TCCCA-----------ATTCATCCG--AGCTACAATTTAGCAAGT- i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1514702 283 - 1813869 CCGGGGTGAGAACTACCCCCGCTCCACCTCCAGGACGTGGCTCAGCCACTTGTGGCTAAGCATG--------------------------------GTGGGGACAGAAGAGCTGTTG--AAAGTGAGA---------AGATGGGT-GGAAAGTCAGACGGGACAGCCTCAGG----TCCTGTGGCTTTGGGAGCTTGGGCCCTGCAGGTTTTCC-CTGGGGCTG-TGCACC--TACTGGGCACGTTTT-CTTGGCCAGG--------------------CC-TGTGT---GGAGCGGGC-TTCCCCGC--------------------CCA-CCGGCAGCAGGAGCGCCC-TCGCA-----------ATTCATCTG--AGTTACAATTTAGCAAGC- i aotNan1.NW_018494782v1 C 0 C 0 s canFam3.chr1 56180811 347 + 122678785 CCAAGGTAAGAATGATCCCATACTTATCTCCAGGACATGGAATAACCACTTCATGATCAATATCTGTTTTTTTTTTTTTAATATTgagaagaattgatagagagggaggtgcaggaag-ggagagagatggagaaggagaagggg-agagaaaCA-ATAGGCCAGCCCCGGCTCCCTTCCACGGTTCC--CAGTCAGGATCCCACATACTCACT--TGACACTGCTGAACCATTCATGGAGGCGCTTTGCTCCGTCATA--------------------CCTTGCAT---GCACTGTG-AGTCCTTGC------------------TCTTATTTCACAGTATTAACACGT-TATTAATCATTTGGTTATTAATCACTCAGTGATGATTTAGCAGGTA i canFam3.chr1 I 15 I 355 e otoGar3.GL873575 10955277 732 - 12073884 I e dasNov3.JH569188 579446 449 + 760995 I e cerAty1.NW_012002071v1 1403581 660 + 3144229 I a score=553701.000000 s hg38.chr6_KB021644v2_alt 113600 83 + 185823 ACTGt-----ttttctt-----ttctttt----tttctttttggagatggagtcttgctc-tgctgcccaggctggagtgctatggggtgatcttggc s panTro5.chr6 173569418 86 + 175400573 ACTGt-----ttttctt--cttttctttt----tttctttttggagatggagtcttgctc-tgttgcccaggctggagtgctatggggtgatcttggc i panTro5.chr6 C 0 C 0 s panPan2.chr6 171803247 86 + 173848474 ACTGt-----ttttctt--cttttctttt----tttctttttggagatggaatcttgctc-tgttgcccaggctggagtgctatggggtgatcttggc i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11486040 88 - 12463322 ACTGt-----ttttcttttcttttctttt----tttctttttggagatggagtcttgctc-tgttgcccaggctggagtgctatggggtgatcttggc i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156311096 87 + 157873769 ACTAt-----ttttctt-----ttcttttgctctttctttttggagatggagtcttgctc-tgttgcccatgcaggagtgcaatggggagatcttggc i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170341348 89 + 172585720 ACTAt-----ttttcttttcttttctttt----tttctttttggagatggagtcttactcttgttgcccaggttggactgcaatggggtgatctcggc i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169086729 89 - 170955103 ACTAt-----ttttcttttcttttctttt----tttctttttggagatggagtcttactcttgttgcccaggttggactgcaatggggtgatctcggc i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8373275 89 + 10161646 ACTAt-----ttttcttttcttttctttt----tttctttttggagatggagtcttactcttgttgcccaggttggactgcaatggggtgatctcggc i macNem1.NW_012011000v1 C 0 C 0 s chlSab2.chr13 96690705 89 + 98384682 ACTAt-----ttttcttttcttttcttta----tttctttttggagatggagtcttactcttgttgcccaggttggactgcaatggggtgatctcggc i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8227256 93 - 10857215 ACTATttttcttttcttttcttttctttt----tttctttttggagatggagtcttactc-tgttgcccaggctggactgcaatggggtgatctcggc i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15619027 88 - 23502949 ACTAt-----ttttcttttcttttctttt----tttctttttggagatggagtctgactc-tgttgcccaggttggactgcaatggggtgatctcggc i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169898602 77 + 171630274 ACTGt-----ttttttc-----ttctttc----tttctccttggagatggagtcttgctc-tgcctcc------aggctgcagaggcgcaatctcatc i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1303799 73 - 2905041 ACGAt-----ttttccc-----ttctttc----ttt----ttggagatggagtcttgctc-tgtctcc------aggctgcagtggcacgatctcagc i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1266225 77 - 2164891 ACTAt-----ttttctc-----tcctttg----tttctttttggagatggagccttgctc-tgtctcc------aggctgcagtggcatgatctcagc i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1514985 77 - 1813869 ACTAt-----ttttctc-----ttctttc----tttctttttggagatggagtcttgctc-tgtctcc------aggctgcagtggcacgacctcagc i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10955277 732 - 12073884 I e dasNov3.JH569188 579446 449 + 760995 I e canFam3.chr1 56181158 355 + 122678785 I e cerAty1.NW_012002071v1 1403581 660 + 3144229 I a score=644385.000000 s hg38.chr6_KB021644v2_alt 113683 73 + 185823 tcactgcaacctctgcctcccgggttcaagtgattctcccacctcagcctcccgagtggctgggattacggac s panTro5.chr6 173569504 73 + 175400573 tcactgcaacttctgcctcccgggttcaagtaattctcccgcctcagcctcccgagtggctgggattacggac i panTro5.chr6 C 0 C 0 s panPan2.chr6 171803333 73 + 173848474 tcactgcaacttctgcctcccgggttcaagtaattctcccgcctcagcctcccgagtggctgggattacagac i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11486128 73 - 12463322 tcactgcaacctctgcctcccgggttcaagtgattctcccgcctcagcctcccgagtggctgggattacggac i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156311183 73 + 157873769 tcactgaaacctctgcctcccgcattcaagtggttctcccgcctcagcctcccgagtggctgggattacggac i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170341437 73 + 172585720 tcactgcaacttccacctcccgggttcgagtgattctccagcctcagcctcccaagtagctgggattacagac i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169086818 73 - 170955103 tcactgcaacttccacctcccgggttcgagtgattctccagcctcagcctcccaagtagctgggattacagac i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8373364 73 + 10161646 tcactgcaccttccacctcccgggttcgagtgattctccagcctcagcctcccaagtagctgggattacagac i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1404241 73 + 3144229 tcactgcaatctccacctcccgggttcaagtgattctcctgcctcagcctcccaagtagctgggattatagac i cerAty1.NW_012002071v1 I 660 C 0 s chlSab2.chr13 96690794 73 + 98384682 tcactgcaacctccacctcccgggttcaagtgattctcctgccccagcctcccaagtagctgggattacagac i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8227349 66 - 10857215 tcactgcaa-------ctcccgggttcgagtgattctccagcctcagcctcccaagtagctgggattatagac i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15619115 73 - 23502949 tcactgcaacctccacctcccgggttcaagtgattctcctacttcaacctcccaagtagctgggattacagac i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169898679 73 + 171630274 tcactgcaacctctgcctcccaggttcaggcaattgtccctcctcagcctccggggtagctgggactacaggc i calJac3.chr4 C 0 I 1106 s saiBol1.JH378287 1303872 72 - 2905041 tcactgcaacctttgcctcccaggctcaggcagttctacctcctcagcctcc-gggtagctgggactacaggc i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1266302 72 - 2164891 tcactgcaacccctgcctcccaggttcaggcagttctccctcctcagcctcc-gggtagctggcactacaggc i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1515062 73 - 1813869 tcactgcaacctctgcctcccaggttcaggcaattctccctcctcagcctcccgggtagctgggactacagcc i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10955277 732 - 12073884 I e dasNov3.JH569188 579446 449 + 760995 I e canFam3.chr1 56181158 355 + 122678785 I a score=13265.000000 s hg38.chr6_KB021644v2_alt 113756 5 + 185823 acgtg s panTro5.chr6 173569577 5 + 175400573 acgtg i panTro5.chr6 C 0 C 0 s panPan2.chr6 171803406 5 + 173848474 acgtg i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11486201 5 - 12463322 acggc i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156311256 5 + 157873769 acgcg i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170341510 5 + 172585720 atgtg i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169086891 5 - 170955103 atgtg i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8373437 5 + 10161646 atgtg i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1404314 5 + 3144229 acccg i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96690867 5 + 98384682 acgcg i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8227415 5 - 10857215 acccg i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15619188 5 - 23502949 atgtg i colAng1.NW_012114488v1 C 0 C 0 s saiBol1.JH378287 1303944 3 - 2905041 --gtc i saiBol1.JH378287 C 0 I 2 s cebCap1.NW_016107695v1 1266374 3 - 2164891 --gtc i cebCap1.NW_016107695v1 C 0 I 2 s aotNan1.NW_018494782v1 1515135 3 - 1813869 --gtc i aotNan1.NW_018494782v1 C 0 I 2 e otoGar3.GL873575 10955277 732 - 12073884 I e calJac3.chr4 169898752 1106 + 171630274 I e dasNov3.JH569188 579446 449 + 760995 I e canFam3.chr1 56181158 355 + 122678785 I a score=1024684.000000 s hg38.chr6_KB021644v2_alt 113761 116 + 185823 ccaccacgcccagctaatttttatatttttgatagagacaaagtctcaaactccttacctcaagtgatccacccacctcggcctcccaaactgctgggattacaggtgtaagccac s panTro5.chr6 173569582 116 + 175400573 ccaccacgcccagctaatgtttatatttttgatagagacaaagtctcaaattccttacctcaagtgatccacccacctcggcctcccaaactgctgggattacaggtgtaagccac i panTro5.chr6 C 0 C 0 s panPan2.chr6 171803411 116 + 173848474 ccaccacgcccagctaatgtttatatttttgatagagacaaagtctcaaactccttacctcaagtgatccacccacctcggcctcccaaactgctgggattacaggtgtaagccac i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11486206 116 - 12463322 cacccacgcccagctaatttttatatttttgatagagacaaagtctcgaactccttacctcaagtgatccacccacctcggcctcccaaactgctgggattacaggtgtgagccac i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156311261 116 + 157873769 ccaccacgcctggctaatttttatgtttttgatagagacaaagtctcgaactccttacctcaagtgatccacccaccttggcctcccacagtgctgggattacaggtgtgagccac i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170341515 116 + 172585720 ccaccatgcccggctactttttatatttttcatagagacgaagtcatcaactcctgacctcaagtgatccacccacctctgcctcccaaagtgctgggattacaggtgtgagccac i rheMac8.chr4 C 0 I 16 s macFas5.chr4 169086896 116 - 170955103 ccaccatgcccggctaatttttatatttttaatagagacgaagtctcgaactcctgacctcaagtgatccacccacctctgcctcccaaagtgctgggattacaggtgtgagccac i macFas5.chr4 C 0 I 13 s macNem1.NW_012011000v1 8373442 116 + 10161646 ccaccatgcccggctaatttttatatttttaatagagacgaagtctcgaactcctgacctcaagtgatccacccacctctgcctcccaaagtgctgggattacaggtgtgagccac i macNem1.NW_012011000v1 C 0 I 16 s cerAty1.NW_012002071v1 1404319 116 + 3144229 ccaccatgtccggctaatttttatatttttaatagagacaaagtctcaaactcctaacctcaagtgatccacccacctctgcctcccaaagtgctgggattataggtgtgagccac i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96690872 115 + 98384682 ccaccatgtccggctaatttttatatttttaatagagagaaagtctcaaactcctaacctcaagtgatccaccca-ctctgcctcccaaagtgctgggattacaggtgtgagccac i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8227420 116 - 10857215 ccaccatgtccggctaatttttatatttttaatagagacaaagtctcgaactcctgacctcaagtgatccacccacctctgcctctcaaagtgctgggattacaggtgtgagccac i manLeu1.NW_012106474v1 C 0 I 16 s colAng1.NW_012114488v1 15619193 116 - 23502949 ccaccatgcccggttaatttttatatttttaatagagacaaagtctcaaactcctgacctcaagtgatccacccacctctgcctcccaaagtgctgggattacaggtgtgagccac i colAng1.NW_012114488v1 C 0 I 34 s calJac3.chr4 169899858 88 + 171630274 ccatcacacccggctaatttttgtatttttaatagagacgcgggctcaAACCCCTGG----------------------------CCACACTGCAAGGATGGCAGGAGTGAACCAC i calJac3.chr4 I 1106 C 0 s saiBol1.JH378287 1303949 116 - 2905041 ccatcacacccggctaatttttgtgtttttaatagagacacggtctcaaactcccgaccgcaagtgatccatccacctcggcctcccacactgctgggatgacaggagtgagcctc i saiBol1.JH378287 I 2 C 0 s cebCap1.NW_016107695v1 1266379 116 - 2164891 ccatcacgcccggctaatttttgtatttttaatagagacgcagtctcaaactcctgacctcaagtgatccatccacctcggcctcccacactgctgggatgacaggagtgaactgc i cebCap1.NW_016107695v1 I 2 C 0 s aotNan1.NW_018494782v1 1515140 116 - 1813869 ccatcacacccggctaattttcgtatttttaatagagacgcggtctcaaactctggacctcaagtgatccatccacctcggcctcccacactgctgggatgacaggagtgaaccgc i aotNan1.NW_018494782v1 I 2 C 0 e otoGar3.GL873575 10955277 732 - 12073884 I e dasNov3.JH569188 579446 449 + 760995 I e canFam3.chr1 56181158 355 + 122678785 I a score=56389.000000 s hg38.chr6_KB021644v2_alt 113877 20 + 185823 caca-cccagccAGCAAGTAC s panTro5.chr6 173569698 20 + 175400573 caca-cccagccAGCAAGTAC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171803527 20 + 173848474 caca-cccagccAGCAAGTAC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11486322 20 - 12463322 caca-cccagccAGCAAGTAC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156311377 14 + 157873769 cgca-gccagccAGC------ i nomLeu3.chr3 C 0 C 0 s cerAty1.NW_012002071v1 1404435 20 + 3144229 tgtg-cccggccAGCAAGTAC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96690987 20 + 98384682 tgtg-cccggccAGCAAGTAC i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169899946 20 + 171630274 CATG-CCTGGGTAGCAAGCGC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1304065 21 - 2905041 cccgcccTGGGCAGCAAGCAC i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1266495 20 - 2164891 cacg-cccggGCAGCAAGCAC i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1515256 20 - 1813869 cacg-cccggGCAGCAAGTGC i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10955277 732 - 12073884 I e dasNov3.JH569188 579446 449 + 760995 I e colAng1.NW_012114488v1 15619309 34 - 23502949 I e canFam3.chr1 56181158 355 + 122678785 I e manLeu1.NW_012106474v1 8227536 16 - 10857215 I e macNem1.NW_012011000v1 8373558 16 + 10161646 I e rheMac8.chr4 170341631 16 + 172585720 I e macFas5.chr4 169087012 13 - 170955103 I a score=135156.000000 s hg38.chr6_KB021644v2_alt 113897 34 + 185823 TATTTTTCTTAAGCTACTGCATGAAAGTTAAGAC s panTro5.chr6 173569718 34 + 175400573 TATTTTTCTTAAGCTACTGCATGAAAGTTAAGAC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171803547 34 + 173848474 TATTTTTCTTAAGCTACTGCATGAAAGTTAAGAC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11486342 34 - 12463322 TATTTTTCTTAAGCTACTACATGAAAGTTAAGAC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156311391 24 + 157873769 ----------AAGCTACTGCATGAAAGTTAAGAC i nomLeu3.chr3 C 0 C 0 s cerAty1.NW_012002071v1 1404455 34 + 3144229 TATTTTTCTTAAGATACATCATGAAAGTTAAGAC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96691007 34 + 98384682 TATTTTTCTTAAGCTACATCATGAAAGTTAAGAC i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169899966 34 + 171630274 CATCTTTCTCAAGATACACCATGAAAGTTGAGAC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1304086 34 - 2905041 TATTTTTCTTAAGATGAGCCATGAAAGCTGAGAC i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1266515 34 - 2164891 TATTTTTCTTAAGATACACCATGAAAGTTGGGAC i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1515276 34 - 1813869 TATTTTTCTTAAGATACGCCATGAAAGTTCAGAC i aotNan1.NW_018494782v1 C 0 C 0 s dasNov3.JH569188 579895 32 + 760995 TATTTGCCTTAATGTACATCATGAAAGA-AAGA- i dasNov3.JH569188 I 449 C 0 e otoGar3.GL873575 10955277 732 - 12073884 I e colAng1.NW_012114488v1 15619309 34 - 23502949 I e canFam3.chr1 56181158 355 + 122678785 I e manLeu1.NW_012106474v1 8227536 16 - 10857215 I e macNem1.NW_012011000v1 8373558 16 + 10161646 I e rheMac8.chr4 170341631 16 + 172585720 I e macFas5.chr4 169087012 13 - 170955103 I a score=146740.000000 s hg38.chr6_KB021644v2_alt 113931 32 + 185823 AAAGATTAAAATGAAAAATATGCATCTTCTTT s panTro5.chr6 173569752 32 + 175400573 AAAGATTAAAATGAAAAATATGCATCTTCTTT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171803581 32 + 173848474 AAAGATTAAAATGAAAAATATGCATCTTCTTT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11486376 32 - 12463322 AAAGATTAAAATGAAAAATATGCATCTTCTTT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156311415 32 + 157873769 AAAGATTAAAATGAAAAATATGCATCTTCTTT i nomLeu3.chr3 C 0 C 0 s cerAty1.NW_012002071v1 1404489 32 + 3144229 AAAGATTAAAATGAAAAATATGCATCTTCTTT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96691041 32 + 98384682 AAAGATTAAAATGAAAAATATGCATCTTCTTT i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169900000 31 + 171630274 AAAGAGGAAAAT-AAAAGTATGCATCTTCTTC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1304120 31 - 2905041 AAAGATGAAAAT-AAAAGGATGCACCTTCTTC i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1266549 30 - 2164891 AAAGATGAAAAT-AAAA-TACATATCTTCTTC i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1515310 31 - 1813869 AAAGAAGAAAAT-AAAAGTATGCATCTTCTTC i aotNan1.NW_018494782v1 C 0 C 0 s canFam3.chr1 56181513 32 + 122678785 aaatataaaaatGGAAAAGGCACATCTCTCTT i canFam3.chr1 I 355 C 0 s dasNov3.JH569188 579927 32 + 760995 AAAGATGACACTTGAAAAGAAACATCTTCCTT i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10955277 732 - 12073884 I e colAng1.NW_012114488v1 15619309 34 - 23502949 I e manLeu1.NW_012106474v1 8227536 16 - 10857215 I e macNem1.NW_012011000v1 8373558 16 + 10161646 I e rheMac8.chr4 170341631 16 + 172585720 I e macFas5.chr4 169087012 13 - 170955103 I a score=3322281.000000 s hg38.chr6_KB021644v2_alt 113963 656 + 185823 AAAACATGCATTTTAATGAACTATAATAAAGAAACAAATGTATATTGG----------------------------------------AGATTTTTTTAAGACGGCAATTGTTGCAAAATCTGACAAAGTT--CCAAAAACAGTTTCAGAAATCCCTGAGCTGATCAGCACAGTTTT-------AATTGTTCAAACTACATCTAAATATAGTAAATTGTACCATGATAGCTTACCAATGTCACTTTCAATATTTA-TAAGCATGAAGTTCAATTTATAATAAATGG-AAAATTTAAGAAATATTCTAAATTACTGCTGCATGTCAGTGTCTGTGAATTATTAACAGTT-GGGGTAAACTGTGGCATTGAAACA--T---TTTTTGGTAACCCACATATCCAGGAGTTAGAGATATATTTAGCTACGATGTAAACTTCTGGAGCAAATGCAAAAGACATTCATGCTGAATCCAATACTTGAAATTAAGTTTAACAGAAGGCTCC---------ATCCCAGAATAGGTTCCATATCCAGAGCTGCAAATCGGCCTGAGCACCAGCATTCTGGAAGCTAAGCCAGGTGTGTCGCATCGTGCTCTGCAGAGTGGTCCTATAAAGATCTCCAGAAGTGG-CCTCCGTGAGCGGACGTGCTGGAAATACTTC----CTTGT---------TCGTGAGCTTA-CTG---GAAGCAAGGTAGCCCAGGGCTTGGGAGAGTGCGCTCCA- s panTro5.chr6 173569784 665 + 175400573 AAAACATGCATTTTAATGAACTATAATAAAGAAACAAATGTATATTGG----------------------------------------AGATTTTTTTAAGACGGCAATTGTTGCAAAATCTGACAAAGTT--CCAAAAACAGTTTCAGAAATCCCTGAGCTGATCAGCGCAGTTTT-------AATTGTTCAAACTACATCTAAATATAGTAAATTGTACCATGATAGCTTACCAATGTCACTTTCAATATTTA-TAAGCATGAAGTTCAATTTATAATAAATGG-AAAATTTAAGAAATATTCTAAATTACTGCTGCATGTCAGTGTCTGTGAATTATTAACAGTT-GGGGTAAACTGTGGCATTGAAACA--T---TTTCTGGTAAGCCACATATCCAGGAGTTAGAGATATATTTAGCTATGATGTAAACTTCTGGAGCAAATGCAAAAGAAATTCATGCTGAATCCAATACTTGAAATTCAGTTTAACCGAAGGCTCCGAAGGCTCCAGCTCAGAATAGGTTCCATATCCAGAGCTGCAAATCGGCCTGAGCACCAGCATTCTGGAAGCTAAGCCAGGTGTGTCGCATCGTGCTCTGCAGAGTGGTCCTATAAAGATCTCCAGAAGTGG-CCTCCGTGAGCGGACGTGCTGGAAATACTTC----CTTGT---------TCGTGAGCTCA-CTG---GAAGCAAGGTAGCCCAGGGCTTGGGAGAGTGCGCTCCA- i panTro5.chr6 C 0 C 0 s panPan2.chr6 171803613 656 + 173848474 AAAACATGCATTTTAATGAACTATAATAAAGAAACAAATGTATATTGG----------------------------------------AGATTTTTTTAAGACGGCAATTGTTGCAAAATCTGACAAAGTT--CCAAAAACAGTTTCAGAAATCCCTGAGCTGATCAGCGCAGTTTT-------AATTGTTCAAACTACATCTAAATATAGTAAATTGTACCATGATAGCTTACCAATGTCACTTTCAATATTTA-TAAGCATGAAGTTCAATTTATAATAAATGG-AAAATTTAAGAAATATTCTAAATTACTGCTGCATGTCAGTGTCTGTGAATTATTAACAGTT-GGGGTAAACTGTGGCATTGAAACA--T---TTTCTGGTAGCCCACATATCCAGGAGTTAGAGATATATTTAGCTATGATGTAAACTTCTGGAGCAAATGCAAAAGAAATTCATGCTGAATCCAATACTTGAAATTCAGTTTAACCGAAGGCTCC---------ATCTCAGAATAGGCTCCATATCCAGAGCTGCAAATCGGCCTGAGCACCAGCATTCTGGAAGCTAAGCCAGGTGTGTCGCATTGTGCTCTGCAGAGTGGTCCTATAAAGATCTCCAGAAGTGG-CCTCCGTGAGCGGACGTGCTGGAAATACTTC----CTTGT---------TCGTGAGCTCA-CTG---GAAGCAAGGTAGCCCAGGGCTTGGGAGAGTGCGCTCCA- i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11486408 653 - 12463322 AAAACATGCATTTTAATGAACTATAATAAA-AAACAAATGTATATTGG----------------------------------------AGATTTTTTTAAGACGGCAATTGTTGCAAAATCTGACAAAGTT--CCAAAAACAGTTTCAGAAATCCCTGAGCTGATCAGCGCAGTTTT-------AATTGTTCAAACTACATCTAAATATAGTAAATTGTACCATGATAGCTTACCAATGTCACTTTCAATATTTA-TAAGCATGAAGTTCAATTTATAATAAATGG-AAAATTTAAGAAATATTCTAAATTACTGCTGCATGTCAGTGTCTGTGAATTATTAACAGTT-GGGGTAAACTATGGCATTGGAACA--T---TTT-TGGTAACCCAGATATCCAGGAGTTAG-GATATATTTAGCTATGATGTAAACTTCTGGAGCAAATGCAAAAGAAATTCATGCTGAATCCAATACTTGAAATTAAGTTTAACCGAAGGCTCC---------ATCCCAGTATAGGTTCCATATCCAGAGCTGCAAATCGGCCTGAGCACCAGCATTCTGGAAGCTAAGCCAGGTGTGTCGCATCGTGCTCTGCAGAGTGGTCCTATAAAGATCTCCAAAAGTGG-CCTCCGTGAGCTGACGTGCTGGAAATACTTC----CCTGT---------TTGTGAGCTTA-CTG---GAAGCAAGGTAGCCCAGGGCTTGGGAGAGTGGGCTCCA- i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156311447 657 + 157873769 AAAACATGTATTTTAATGAACTATAATAAAGAAACAAATGTATATTGG----------------------------------------AGATTTTTTTAAGATGGCAATTGTTGCAAAATTTAACAAAGTT--CCAAAAACAGTTTCAGAAATCCCTGAGCTGATCAGCACACTTTT-------AATTGTTCAAACTACATCTAAATATAGTAAATTGTACTATGATAGCTTACCAATGCCACTTTCAATATTTA-TAAGCATGAAGTTCAATTTATAATAAATGGAAAAATTTAAGAAATATTCTAAATTACTGCTGCATGTCAGTGTCTGTGAATTATTAACAGTT-GGGGTAAACTATGGCATTGAAACA--T---GTTTTGGTAACCCACATATCCAGGAGTTAGAGATATATTTAGCTATGACATAAACTTCTGGAGCAATTACAAAAGAAATTCATGCTGAATCCAATACTTGAAATTAAGTTTAACCAAAGGCTGC---------ATCCCAGTATAGGTTCTATATCCAGAGCTGCAAATCAGCCTGAGCACCAGCATTCTGGAAGCTGACTCAGGTGTGTCGCATCGTGCCCTGCAGAGTGGTCCTATAAAAATCTCCAGAAGTGA-CCTCTGTGAGCTGATGTGCTGGAAATACCTC----CTTGT---------TTGTGAGCTTA-CTG---GAAGCAAGGTAGCCGAGGGCTTGGGAGAGTAGGCTCCA- i nomLeu3.chr3 C 0 C 0 s cerAty1.NW_012002071v1 1404521 653 + 3144229 AGAACATGTATTTTAATGAGTTATAATAAAGAAACGAATGTATATTGG----------------------------------------AGATTTTTTTAAGATGACAATTGTTGCAAAATCTAACAAAGTT--CCAAAAACGGTTTCAGAAATCCCTGAGCTGATCAGCGCAGTTTT-------AATTGTTCAAACTACATCTAAACATACTAAATCGTACCATGATAGCTTACCAATGTCACTTTCAGTATTTA-TAAGTATGAAGTTCAATTTATAACAAATGG-GAAATTTAAGAAATATTCTAAATGACTGCTGCATGTCAGTGTCTGTGA---ATTAACAGTT-GGGGTAAACTATGGCATTTAAACA--T---TTTTTGGTAACCCACATATCCAGGAGTTAGAGATATATTTAGCTATGATGCAAACTTCTGGAGCAATTGCAAAAGAAATTCATGCTGAATCCAATACTCGAACTTAAGTTTAACCAAGGGCTCC---------ATCCCAGCATAGGTGCCATATCCAGAGCTGCAAATCAGCCTGAGCACCAGCATTCTGGAGGCTGAGCCAGGTGTGTCGCTTCGTGCTCTGCAGAGTGGCCCTATAAACACCTCCAGAAGTGG-CCTCCATGAGCGGACGTGCTGGAAATACTTT----CTTGT---------TTGTGAGCTTA-CTG---GAAGCAAGGTAGCCGGGGGCTTGGGAGCATGGGCTCCA- i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96691073 653 + 98384682 AGAACATGTATTTTAATGAGTTATAATAAAGAAACGAATGTATACTGG----------------------------------------AGATTTTTTTAAGATGACAATTGTTGCAAAATCTAACAAAGTT--CCAAAAACGGTTTCAGAAATCCCTGAGCTGATCAGCGCAGTTTT-------AATTGTTCAAACTACATCTAAACATACTAAATCGTACCATGAAAGCTTACCAATGTCACTTTCAGTATTTA-TAAGTATGAAGTTCAATTTATAATAAATGG-GAAATTTAAGAAATATTCCAAATTACTGCTGCATGTCAGTGTCTGTGA---ATTAACAGTT-GGAGTAAACTATGGCATTTAAACA--T---TTTTCGGTAACCCACATATCCAGGAGTTAGAGATATATTTAGCTATGATGCAAACTTCTGGAGCAATTGCAAAAGAAATTCATGCTGAATCCAATACTCGAACTTAAGTTTAACCAAAGGCTCC---------ATCCCAGCATAGGTGCCGTATCCAGAGCTGCAAATCAGCCTGAGCACCAGCATTCTGGAGGCTGAGCCAGGTGCGTCGCTTTGCGCTCTACAGAGTGGTCCTATAAACACCTCCAGAAGTGG-CCTCCATGAGCGGATGTGCTGGAAATACTTC----CTCGT---------TTGTGAGCTTA-CTG---GAAGCAAGGTAGCCGGGGGCTTGGGGGCGTGGGCTCCA- i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169900031 623 + 171630274 ATAATGCGTGTCTTAACGAACTGTAATAAAGA----AATGCGTATTGG----------------------------------------AGCTCTTTTTAAGATGGCAATTGTTGCAAAATCTAACAGAATT--C------CAGTTTCAGAAATCCCTGAGCTGATGAGTGCAGTTTC--------ATTGCTCAAACTGCACCTAAGTATAGTAAATGGTACCATGATGGTTTACCAATGTCACTTTCAATATTTT-TAAGCGTGAAGGTCAATTTACAATAAATGG-AAAATTTAAGAAATATTCTAAATTACTGCTGCATGTCC-TGTCTGTCAATGATG--------------AACTATGGAATTGAAACG--T---TTTTTGGTAATCCACGTGTCCAGGAGTTAGGGATATATTTAGCCATGATGTAAACTTTTGGA------GCAAAGGAAATTTATGCTGCATCCAACACTTGAAATTAAGTTTAACCAAAGGCTAC---------CTCCCGGCATATGTACCATACCCAGAGCAGCCAGTCAGCC-GGGCACCAGCATTCTGGAAGCGGAGCCAGGTCCACAGAGTCCTGCTCTGTAGAGTGGTCCTGTAGAAATCTCCAGAAGTGG-CCTCTGTGAGCTGGCCTGCTGGAAATGCTTC----CTTGT---------TTGTGAGGGTG-CTG---GAAGCAAGGTAGCCTAGTGCTTGTGAGAGCG-GGTCCA- i calJac3.chr4 C 0 I 598 s saiBol1.JH378287 1304151 628 - 2905041 ATAATACGTATCTTACTGAACTGTAATAAAGA----AATGCATATGGG----------------------------------------AGACCTTTTTAAGATGGCAATTGTTGCAAAATCTAACAAAGTT--CC----ACAGTTTCAGAAATCCCTGAGCTGATCAATGCAGTTTT--------ATTGTTCAAACTGCATCTAAATATAGTAAATGGTACCATCATAGTTTACCAATGTCACTTTCAATATTTA-TAAGTGTGAAGTTCAATTTATAATAGATGC-AAAACTTAAGAAACATTCTAAATTACTGCTGCATGTCC-TGTCTGTCAATTATT--------------AACTATGGCATTGAAACA--T---TTTTTGGTAACCCACATATCCAGGAGTTAGGGATATATTTAGCTCTGATGTAAACTTTTGGAGCAACTGCAAAGGACATTTATGCTGCATCCAATACTTGAAATTAAGTTTAACCGAAGGCTGC---------CTCCCAGCATACGTACCATATCCAGAGCGGCCAGTCAGCC-GGGCACCAGCGTTCTGGAAGTTGAGCCAGGTCCATTGAGTCATGCTC--TACAGTGGTCCTGTAGAAATCTCCAGAAGTGG-CCTCTGTGAGCTGACGTGCTGGAAACGCGTC----CTTGT---------TTGTGAGGGTG-CTG---GACGCAAGGCAGCCGAGTGCTTGTGAGAGT--GCTCCA- i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1266579 631 - 2164891 ATAATATGTATCTTAATGAACTGCAATAAAGA----AATGCACATTGG----------------------------------------AGATCTTTTTAAGATGGCAATTGTTGGAAAATCTAACAAAGTT--CC----ACAGTTTCAGAAATCCCTGAGCTGATCAATGCAGTTTT--------ATTGTTCAAAATGCATCTAAATATAGTAAATGGTACCATCATAATTTACCAATGTCACTTTCAATATTTA-TAAGTGTGAAGTTCAGTTTATACTAAATGG-AAAATTTATGAAATATTCTAAATTACAGCTGCATGTCC-TGTCTGTCAATTATT--------------AACTATGGCATTGAAACA--T---TTTTTGGTAACCCACATATCCAGGAGTTAGGGATATATTTAGCTATGATGTAAACTTTTGGAGCAACTGCAAAAGAAATCTATGCTGCATCCAGTACTTGAAATTAAGTTTAACCGAAGGCTAC---------CTCCCAGCATATGTACCATATCCAGAGCGGACAGTCAGCC-GGGCACCAGCATTCTGGAAGCTGAGCCAGGTCCATTGAGTCATGCTCTGTAGAGTGGTCCTATAGAAATCTCCAGAAGCGG-CATCTGTGAGCTGACATGCTGGAAATGCTTC----CTTGT---------TTGTAAGGGTG-CTG---AAAGCAAGGTAGCCAAGTGCTTGTGAGAGTG-GGTCCA- i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1515341 631 - 1813869 ATAATACGTATCTTAACGAACTGTAAGAAAGA----AATGCATATTGT----------------------------------------AGATCTTTTTAAGATGGCAATTGCTGCAAAATCTAACAAAGTT--CC----ACAGTTTGAGAAATCCCTGAGCTGATCAGTGCAGTTTT--------ATTGTTCAAACTGCATCTAAATATAGTAAATGGTACCATGATAGTTTACCAATGTCACTTTCAATACTTA-TAAATGTGAAGTTCAATTTATAATAAATGG-AAAATTTAAGAAATATCCTAAATTACTGCTGCGTGTCC-TGTCTGTCAATTGTT--------------AACTATGGCATTGAAACA--T---TTTTTGGTAACCCACACATCCAGGAGTTAGGGATATATTTACCTATGATGTAAACTTTTGGAGCAACTGCAAAAGAAACTTATGCTGCATCCAATACTTGGAATTAAGTTTAACCAAAGGCTAC---------CTCCCGGCATATGTGCCATATCCAGAGCGGCCAGTCAGCC-GGGCACCAGCATTCTGGAAGCTGAGCCGGGTCCGTTGAGTCATGCTCTGTAGAGCGGTCCTGTAGAAATCTCCAGAAGTGG-CCTCTGTGAGCTGACGTGCTGGAAATGCTTC----CTTGT---------TTGTGAGGGAG-CTG---GAAGCAAGGTAGCTGAGTGCTTGTGCGAGTG-GGTCCA- i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10956009 699 - 12073884 aaGGTATGTGTTTTAATTCCTTATAATAAGGTAACAAatatatattaatatacataaatatatatgtgtgtgtatatatatatatCATAGAT-TGTTTAAGGTGGTAACTATTGCAAAATCAAATAAAAGTACCCCCCCAAAATTTAAAAAATCCATGAGCTGATCAGT----TTTT--AAAATAACTATTCAAACTGCATCTAAAGATATTCAATTGTACCATGATGGCTTACAAATATCAATTGTACTATCTG-TAAGGATGAAATTCAATTTATAATACATAT-AAATTTTAAGAAATATCTCAAATTGCTGCCACAAGTCAGTGTCTGTCAATTATTAGTGGTT-GGGGTGAATTATAACATTTCAACAATT---TTTTTGACAACCTATATATCCAGGAGTTA--GATATATTTAGTTATGATGTAAACTGTTGGAGCATTAGCAAAAGAAAATCATACTAAATCCGATACT-GAAATTAAATTTAACC-AACTCTGT---------ACCCCAGCATCTGTTTCATGTCTAGTACCACGAATCAGACTGGGCACCAACATTCTCAGAA-TGAGGCAGATCCTTTGAGTCATGGT-TACGGAACAGGCTTATATAAATCTCCTGAAGTGGACTTGCATATGCCTATGTGGT-CAAATACTTCTCTGCTTAT---------TTTTTACCACAGCTT---GAGACAGAATAGCGCAGCACTTATGAAAGTGGGCTCAA- i otoGar3.GL873575 I 732 C 0 s canFam3.chr1 56181545 640 + 122678785 AAACTACGTATTTTAATTCACTGTAGTAAAACAACACATACACGTCAG----------------------------------------AGGT-GGTTTAAGACAGAGACTGTTGCGAAATCCAGGACAACA--------GAAATTCTGGAAACCACTGA-CTGATACGAGCAGTTTTT-AAAAGAACCTTTCAAACTGCATCTAAGTAGAGTAAAGTTTACTGTGACAGTTTATAAACGTCAATTTCAACACTCGTTAAGTACAAAGTTCAATTTATAATAAATGG-AAATTTTAAGAAATATTCCAAATTGCTGCCTTGTGTTGGCATCCGTCGGCTATTAATGGTTGGGGGCAAGCAATGGCTCTGAAGCA--CATATTTTTGGTAACCTACGGATCCAGGAGCTA--GATATATTTAGATGTGATAGAAACTCTTGGAGCGTTAGCAGAGGAAAGCCATACTAAATCCAATACT-GAAATTAAATTTAACCAAATGCTTT---------ACCCCAGCATCTGTTTCCTATCCAGTTCAACAAATCAAACTGGTC-CTAAAATTCTAAAAA-TGAGCCAGAACCTCTTACTCATCATTTACAGGACGGTCTTCCATAAATCTCCTCGAGCGG--CTGCATAGGCTTGCCTGCTGGACAGACTTC----TCCCC---------GGGTCTGGCCA-CTGTTTGAAGCAGAGCAGCAGGGCACCA----------------- i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 579959 658 + 760995 AACACAAATGTTTTAATATACAATAATAAAGCAACAGATGCATATCAG----------------------------------------ATGT-TATTTAAGAT---AATTGTTACAAAATCTAACAAAGAT--TGTAATAAACATTTCAAAATCACTACGCTGATCAAAGCAATTTTTAAAAAGAACTGGTCAATCTGTACCTAAATATAGCGAATTCTACTATAATCCTTTATAAGAATCAATTTCAATATTTA-TAAATATGAAATGCAATTTATAA-AAATGG-AAATTTTAAGAAATATTCAAAATTGCTGCCTCATGTTGGTGTCTGTCAGTTATTAATGACTGGGGGTAAATTAAGCCATTTAAAAA--A--AAATTTGGTAACCTACATATCCAAGAGTAC--GATATACTTAGATAAG----TAAATTTTGGAGCATTAGCAAAAGAAATTTACCCTAAATCCCATACT-GAAATTAAATTTAACCAAATGCTTT---------ATCCCAGCATCTGTTTCATATACAGTCCTGCAAATCAGAATGCGTACTAAAATTCAAAATA-TGAGCCAGACTCTTTGGCTCATGATTTAGAGAATAGTCTTGTATAAATCTCCTCAAGAAGACCTCCAGAAGATTACTTATT------ATTCC----CTTATTATAATTTATTTTGGCCATGATTT---GAAGCAGAATAGTAACGTGCTTAAAAAAAACAAGCCCAA i dasNov3.JH569188 C 0 C 0 e colAng1.NW_012114488v1 15619309 34 - 23502949 I e manLeu1.NW_012106474v1 8227536 16 - 10857215 I e macNem1.NW_012011000v1 8373558 16 + 10161646 I e rheMac8.chr4 170341631 16 + 172585720 I e macFas5.chr4 169087012 13 - 170955103 I a score=498240.000000 s hg38.chr6_KB021644v2_alt 114619 124 + 185823 GGGTGGGGTGGTTGCTGTGAGACCAGATGATGTCACGGAGA--CGCTCGGGATGTTTTTGCCCT-TCCACACTCTTCACGGCCTCCCGTTTTTGCTCCTTCCATTCATAACAGCCGCAGAGATCATC s panTro5.chr6 173570449 124 + 175400573 GGGCGGGGTGGTTGCTGTGAGACCAGATGATGTCGCGGAGA--CGCGCGGGATGTTTTTGCCCT-CCCACACTCTTCATGGCCTCCCGTTTTTGCTCCTTCCATTCGTAACAGCCGCGGAGATCATC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171804269 124 + 173848474 GGGTGGGGTGGTTGCTGTGAGACCAGATGATGTCGCGGAGA--CGCTCGGGATGTTTTTGCCCT-CCCACACTCTTCATGGCCTCCCGTTTTTGCTCCTTCCATTCGTAACAGCCGCGGAGATCATC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11487061 124 - 12463322 GGGTGGGGTGGTTGCTGTGAGACCAGATGATATCACGGAGA--CGCTCGGGATATTTTTGCCCT-TCCACACTCTTCATGGCCTCCCGTTTTTGCTCCTTCCATTCGTAACAGCCGTGGAGATCATC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156312104 124 + 157873769 GGGTTGGGTGGTTGCTGTGAGACCAGATGATGTCATGGAGA--CGCTTGGGATGTTTTTGCCCT-CCCACACTCTTCATGGCCTCCCGTTTTTGCTCCTTCCATTCGTAACAGCTGTGGAGATCATC i nomLeu3.chr3 C 0 C 0 s cerAty1.NW_012002071v1 1405174 124 + 3144229 GTGTCGGGTGGTTGCTGTGAGACCAGATGATGTCATGGAGA--TGCTCGGGAAGTTTTTGCCCT-CCCGCACTCTTCATGGCCTCCCGTTTTTGCTCCTTCCATTCGTAACAGCCATGGAGGTCATC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96691726 124 + 98384682 GTGTCGGGTGGTTGCTGTGAGACCAGATGACGTCATGGTGA--TGCTCGGGAGGTTTTTGCCCT-CCTGCACTCTTCATGGCCCCCCATTTTTGCTCCTTCCATTCGTAACAGCCATGGAGATCATC i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169901252 122 + 171630274 GGGTCAGGCGGCCGCCGTGGAGCCAGATAACGTCATGGAGA--CGCTGGGA--GGCTTTATCCT-CCCACACTCTTCTTCGCCTCCTGTTTTTGCTCCTTCCATTCGCAGCAGCCATGAAGGTCATC i calJac3.chr4 I 598 C 0 s saiBol1.JH378287 1304779 121 - 2905041 GGGTCAGGCGGCCGCTGTGGAGCCGGATGATGTAA-GGAGA--CGCTGGGA--GGCTTCATCCC-CCCACACTCTTCTTCGCCTCCTGTTTTTGCTCCTTCCATTCACAGCAGCCATGGAGGCCATC i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1267210 121 - 2164891 GGGTCAGGCGGCCGCTGTGGAGCCGGATGATGTAA-GGAGA--TGCTGGGA--GGCTTTATCCT-CCCACACTCTTCTTCGCCGCCTGTGTTTGCCCCTTCCATTCACAGCAGCCATGGAGATCATC i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1515972 121 - 1813869 GGGTCAGGCGGCCGCTGTGGAGCCGGATGATGTCA-GGAGA--TGCTTGGA--GGCTCTATCCT-CCCACACTCTTCTTCGCCTCCTGTTTTTGCTCCTTCCATTCACAGCAGCCATGGAGGTCATC i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10956708 116 - 12073884 GAATGAGACAGT--CCGTTGACTCAGATCATGTGGGGGGTG--TGGCCGT---GCTTCTGTCCT-GCTGAGATCTCCAT--CCCTCCATTTCT-TTCCATCCTTTCACAACAACAGTTGAGATGATC i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56182185 109 + 122678785 GGGTCAGCCGTCTG-TGTCTGCTCAG-TGATGGCA-GGAG----GCCAGAG-------TGCCCT----GCGTGCCACCCAGCCTCCCTTCTCTGCCTCACCCTCTCAGGAGGGCAGTTGAAATCATC i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 580617 123 + 760995 GAGTTAGACAATCTGTGTTGAATcag-tagtgtcatggagaggagttgaggatgcttttacccttcccatcatctccat---cagccaggtcccctccatcttttcctaaaggcaattgacatagtt i dasNov3.JH569188 C 0 C 0 e colAng1.NW_012114488v1 15619309 34 - 23502949 I e manLeu1.NW_012106474v1 8227536 16 - 10857215 I e macNem1.NW_012011000v1 8373558 16 + 10161646 I e rheMac8.chr4 170341631 16 + 172585720 I e macFas5.chr4 169087012 13 - 170955103 I a score=17490.000000 s hg38.chr6_KB021644v2_alt 114743 3 + 185823 TCG s panTro5.chr6 173570573 3 + 175400573 TCG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171804393 3 + 173848474 TCG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11487185 3 - 12463322 TCG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156312228 2 + 157873769 TC- i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169087025 3 - 170955103 TCA i macFas5.chr4 I 13 C 0 s cerAty1.NW_012002071v1 1405298 3 + 3144229 TCA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96691850 3 + 98384682 TCA i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169901374 3 + 171630274 TCA i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1304900 3 - 2905041 TCA i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1267331 3 - 2164891 TCA i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1516093 3 - 1813869 TCA i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10956824 3 - 12073884 TCA i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56182294 3 + 122678785 TCA i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 580740 3 + 760995 tca i dasNov3.JH569188 C 0 C 0 e colAng1.NW_012114488v1 15619309 34 - 23502949 I e manLeu1.NW_012106474v1 8227536 16 - 10857215 I e macNem1.NW_012011000v1 8373558 16 + 10161646 I e rheMac8.chr4 170341631 16 + 172585720 I a score=146349.000000 s hg38.chr6_KB021644v2_alt 114746 18 + 185823 ATTGTATCTAAATTGCTA s panTro5.chr6 173570576 18 + 175400573 ATTATATCTAAATTGCTA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171804396 18 + 173848474 ATTATATCTAAATTGCTA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11487188 18 - 12463322 ATTGTATCTAAATTGCTA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156312230 18 + 157873769 ATTGTATCTAAATTGCTA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170341647 18 + 172585720 ATTGTATCTAAATTGCTG i rheMac8.chr4 I 16 C 0 s macFas5.chr4 169087028 18 - 170955103 ATTGTATCTAAATTGCTG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8373574 18 + 10161646 ATTGTATCTAAACTGCTG i macNem1.NW_012011000v1 I 16 C 0 s cerAty1.NW_012002071v1 1405301 18 + 3144229 ATTGTATCTAAACTGCTG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96691853 18 + 98384682 GTTGTGTCTAAGTTGCTG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8227552 18 - 10857215 ATTGTATCTAAATTGCTG i manLeu1.NW_012106474v1 I 16 C 0 s calJac3.chr4 169901377 17 + 171630274 ATTGTGTCTACGT-GCTG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1304903 18 - 2905041 ATTGTGTCTACATGGCTG i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1267334 18 - 2164891 ATTGAGTCTACATGGCTG i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1516096 18 - 1813869 ATCGTGTCTACGTGGCTG i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10956827 18 - 12073884 AACTCTTCTAGACTGCTA i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56182297 17 + 122678785 TTTGTACTGAAATTGCT- i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 580743 18 + 760995 attttatctcaattgcta i dasNov3.JH569188 C 0 C 0 e colAng1.NW_012114488v1 15619309 34 - 23502949 I a score=1685652.000000 s hg38.chr6_KB021644v2_alt 114764 197 + 185823 CACACTACGTGGCTATCCAGTCCATCTCAGTTTTGTGCAGGTCTGTTGGGTCTCCGCTCCTCAGTGCAGTGT-CCCCGAAGCCCCTTCCTTATCAACTGAAattctagagccatcgctagttgaaccttactggtttctgcctt-ggcagagctgggtgaccttagg-caagacaattaatcatcgtatgcttcagtttc s panTro5.chr6 173570594 197 + 175400573 CACACTACGTGGCTATCCAGTCCATCTCAGTTTTGTGCAGGTCTGTTGGGTCTCCGCTCCTCAGTGCAGTGT-CCCCGAAGCCCCTTCCTTATCAACTGAAATTCTAGAGCCATCACTAGTTGAACCTTACTGGTTtctgcctt-gggagagctgggtgaccttagg-caagacaattaatcatcgtatgcttcagtttc i panTro5.chr6 C 0 C 0 s panPan2.chr6 171804414 197 + 173848474 CACACTACGTGGCTATCCAGTCCATCTCAGTTTTGTGCAGGTCTGTTGGGTCTCCGCTCCTCAGTGCAGTGT-CCCCGAAGCCCCTTCCTTATCAACTGAAattctagagccatcgctagttgaaccttactggtttctgcctt-gggagagctgggtgaccttagg-caagacaattaatcatcgtatgcttcagtttc i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11487206 197 - 12463322 CGCACTACATGGCTATCCAGTCCATCTCAGTTTTGTGCAGGTCTGTTGGGTCTCCGCTCCTCAGTGCAGTGT-CCCCGAAGCCCCTTCCTTATCAACTGAAATTCTAGAGCCATCGCTAGTTGAAACttactggtttctgcctt-gggagagctgggtgaccttagg-caagataattaatcattgtatgcttcagtttc i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156312248 197 + 157873769 CACACTACATGCCTATCCAGTCCATCTCAGTTTTGTGCAGGTCTGTTGGGTCTCCGCTCCTCGGTGCAGTGT-CTCTGGAGCCCCTTCCTTATCCACTGAAattctagagccatcgctagttgaacctcactggtttctgcctt-gtgagaactgggtgaccttagg-caagataatttatcattgtatgcttcagtttc i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170341665 194 + 172585720 CACACTACGTGGCTATGCAGTCCATCTCAGTTTTGTGCAGGTCCGTTGG---TCCGCTCCTCAGTAAAGTGC-CCATGAAGCCCCTTCCCTATCAACTGAAattctagagccattgctagttgaacctcactggtttctgcctt-gtgagagctgggtgaccttagg-caagataattaatcattgtatacttcagtttc i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169087046 194 - 170955103 CACACTACGTGGCTATGCAGTCCATCTCAGTTTTGTGCAGGTCCGTTGG---TCCGCTCCTCAGTAAAGTGC-CCATGAAGCCCCTTCCCTATCAACTGAAattctagagccattgctagttgaacctcactggtttctgcctt-gtgagagctgggtgaccttagg-caagataattaatcattgtatacttcagtttc i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8373592 194 + 10161646 CACACTACGTGGCTATGCAGTCCATCTCAGTTTTGTGCAGGTCCGTTGG---TCCGCTCCTCAGTAAAGTGC-CCATGAAACCCCTTCCCTATCAACTGAAattctagagccattgctagttgaacctcactggtttctgcctt-gtgagagctgggtgaccttagg-caagataattaatcattgtatacttcagtttc i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1405319 197 + 3144229 CACACTACATGGCTATCCAGTCCATCTCAGTTTTGTGCAAGTCTGTTGGGTCTCCGCTCCTCGGTGCAGTGC-CCCCGAAGCATCTTCCTTATCAACTGAAattctagagccattgctagttgaacctcactggtttctgcctt-gggagagctgggtgacctcagg-caagataattaatcattgtatgcttcagtttc i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96691871 193 + 98384682 CACACTGCATGGCTATCCAGTCCATCTCAGTTGTGTGCAAGTCTGTTGGGTCTGCGTTCCTTGGTGCAGTGC-CCCCGAAGCCCCTTCCTTATCAACTGAAattctagagccattgctagttgaacctcactggtttctgcctt-gggagagctgggtgacctcagg-caaga----taatcattgtctacttcagtttc i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8227570 194 - 10857215 CACACTACGTGGCTATCCAGTCCATCTCAGTTTTGTGCAGGTCCGTTGG---TCCGCTCCTCAGTAAAGTGC-CCACGAAGCCCCTTCCCTATCAACTGAAattctagagccattgctagttgaacctcactggtttctgcctt-gggagagctgggtgaccttagg-caagataattaatcattgtatgcttcagtttc i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15619343 194 - 23502949 CACGCTACATAGCTATCCAGTCCATCTCAGTTTTGTGCAGGTCCGTTGG---TCCGCTCCTCAGTGAAGTGC-CCACGAAGCCCCTTCCTTATCAACTGAAattctagagccattgctagttgaacctcactggtttctgcttt-gtgagagctgggtgaccttagg-caagataattaatcattgtatgcttcagtttc i colAng1.NW_012114488v1 I 34 C 0 s calJac3.chr4 169901394 175 + 171630274 CACACGACAGGGCCAGACAGTCAACCCCAGCTCTGTGCAGGTTTTCTGGGTCCCAGCTCCCCGGTGCAGCGTGGCCCAAAGCCCCTTCCT----GACTGAAATTCTGCAGCCAT----------------CTAGTTTCTGCCTT-GTGAGA-CTGGGTGACCTT-GG-CAAGGTGACTGATCATTGTATGCTGCA-TTTC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1304921 193 - 2905041 CACACGACAGGGCCAGACAGTCAACCCCAGTTCTGTGCAGGTCTTCTGGGTGCCCGCTCCCTGGTGCAGCGTGGCCCGAAGCCCCTTCCT----GAcagaaattctgcagccatcgctagttgaacctcactggtctctgcctt-gtgaga-ctgggtgaccttagg-caaggtgattgatcattttacgctgcagtttc i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1267352 193 - 2164891 CACATGACAGGGCCAGACAGTCAGCCCCAGGTCTGTGCAGGTCTTCTAGGTCCCCGCTCCCCGGTGCAGTGTGGCCCGAAGCCCCTTCCT----GACAGAAATTCTGCAGCCATCGCTAGTTGAACCTCACTGGTTtctgcctt-gtgaga-ctgggtgaccttagg-caaggtgattgatcactgtatgctgcagtttc i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1516114 193 - 1813869 CACACGACAGGGCCAGACAGTCAACCCCAGTTCTGTGCAGGTCTTCTGGGTCCCCGCTCCCCGGTGCAGCCTGGCCCGAAGCCCCTTCCT----GACTGAGATTCTGCAGCCATCGCTAGCTGACCCTCACTGGTTtctgcctt-gtgaga-ctgggtgagcttagg-cgaggtgactgatcattgtatgctgcagtttc i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10956845 115 - 12073884 CAC-----------AGACAG--------AATTCTGTGCAAGCCTCCTGGACCTCCGCT-----GTCAAGTGT-----------------------------------------------GTT------------TTCctgcctt-gtgtgagctgtgtgaccttaggacaagataattcatcatt-tgtgcctctgtttt i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56182314 134 + 122678785 --------GTGGC------------ATCAGTT-TGTGGAGGATCTGTGGACCCCACCTCC-------AGCCT-------GGCCCCTCCAG----CACAGCCATGCTAGAGCT-CGGGTGATCAGACCT------------------------ctgtgtca-cttggg-cacagtgattaatcattctgtgccttggtttc i canFam3.chr1 C 0 I 38 s dasNov3.JH569188 580761 167 + 760995 ---------------tgcagtc------aggtttataaaggtctcttggacaggcactttccagtt---tgt-gtcctaagc-cctcctatatagact----ttctcgagttaccattgGTTAAATCTCATTTGGTCTTGTTTTAATGGtagctgtgtgacattgga-gaagataatc-atcattttgtgcctcagttt- i dasNov3.JH569188 C 0 C 0 a score=585623.000000 s hg38.chr6_KB021644v2_alt 114961 57 + 185823 t----gcaatattacctatgtcataggtttattgttttgtcaaagatttaaatgaatacat s panTro5.chr6 173570791 57 + 175400573 t----gcaatattacctatgtcataggtttattgttttgtcaaagatttaaatgaatacat i panTro5.chr6 C 0 C 0 s panPan2.chr6 171804611 57 + 173848474 t----gcaatattaccaatgtcataggtttattgttttgtcaaagatttaaatgaatacat i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11487403 57 - 12463322 t----gcaatattacctatgtcataggtttattgttttgtcaaagatttaaatgaatacat i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156312445 57 + 157873769 t----gcaatattacctatgtcataggtttattgttttgtcaaagatttaaatgaatacat i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170341859 57 + 172585720 t----gcaatattacctatgtcataggtttattgttttgtcaaagatgtaaatgaatacat i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169087240 57 - 170955103 t----gcaatattacctatgtcataggtttattgttttgtcaaagatgtaaatgaatacat i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8373786 57 + 10161646 t----gcaatattacctatgtcataggtttattgttttgtcaaagatgtaaatgaatacat i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1405516 57 + 3144229 t----gcaatattacctatgtcataggtttattgttttgtcaaagatgtaaatgagtacat i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96692064 57 + 98384682 t----gcaatattacctgtgtcataggtttattgttttgtcaaagatgtaaatgaatacat i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8227764 57 - 10857215 t----gcaatattacctatgtcataggtttattgttttgtcaaagatgtaaatgagtacat i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15619537 57 - 23502949 t----gcaatattatctatgtcataggtttatgattttgtcaaagatgtaaatgagtacat i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169901569 56 + 171630274 T----GCAGTATTGTCTGCATCACAGGTTTATTGTTTTGTCAAAGAT-TAAATGAATATGT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1305114 56 - 2905041 t----gcaatattgcctgcatcatagctttattgttttgtcaaggat-taaataaatacat i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1267545 56 - 2164891 t----gcaatattgcctgcatcataggtttattgttttgtcacagat-taaataaatacat i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1516307 56 - 1813869 t----gcaacattgcctgcaccataggtttgctgttttgtcaaagat-taaataaatacat i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10956960 60 - 12073884 tcttctctatgacgcctacatcatagatttattatttgggaaaagat-gaaatgaatacat i otoGar3.GL873575 C 0 C 0 s dasNov3.JH569188 580928 46 + 760995 --------------cctcttctataatattattcttttggcaaggat-taaatgaataaat i dasNov3.JH569188 C 0 C 0 e canFam3.chr1 56182448 38 + 122678785 I a score=3910600.000000 s hg38.chr6_KB021644v2_alt 115018 388 + 185823 taaggatgtataaagaaattaggatagtgtctagcattcaaaagtgctGGCTGTTGTCAAAGTTACTCTTTTCATTTTTAATATAAAAATGGCGTGCGTGT-----TATAGG-------AGACAGATGTG---------------GGGGAGTGCAG---GTGAGCAGGGAGCTGTTGTCTTGGGAATTCGTTTCTCATCTCTGCAGTCTTTGA-GGAAGAGAAGCTGAGACGTGGAGCCTGGATTTTCCTCTGTGGTCTGCAAACA----TTCAGCGCTTCT-CTAAGC-TCCCATAGCTGTTGTATTTGCTATTAAATGACCTAAAATTTGCTGGTAGTTT-GTTTTGACTGTTTCCTCGTTTGGGGGCTCATTTTTGCATTTCCAA--GGGTATATATGAGCT-----TCCTTCCTCCCTGAGAGCAAACA s panTro5.chr6 173570848 388 + 175400573 taaggatgtataaagaaattaggatagtgtctagcgttcaaaagtgttggctgttgtCAAAGTTACTCTTTTCATTTTTAATATAAAAATGGCGTGGGTGT-----TATAGG-------AGACAGATGTG---------------GGGGAGTGCAG---GTGAGCAGGGAGCTGTTGTCTTGGGAATTCGTTTCTCATCTCTGCAGTCTTTGA-GGAAGAGAAGCTGAGACGTGGAGCCTGGATTTTCCTCTGTGGTCTGCAAACA----TTCAGCGCTTCT-CTAAGC-TCCCATAGCTGTTGTATTTGCTATTAAATGACCTAAAATTTGCTGGTAGTTT-GTTTTGACTGTTTCCTCATTTGGGGGCTCATTTTTGCATTTCTGA--GGGTATATATGAGCT-----TCCTTCCTCCTTGAGAGCAAACA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171804668 388 + 173848474 taaggatgtataaagaaattaggatagtgtctagcattcaaaagtgttggctgttgtCAAAGTTACTCTTTTCATTTTTAATATAAAAATGGCGTGGGTGT-----TATAGG-------AGACAGATGTG---------------GGGGAGTGCAG---GTGAGCAGGGAGCTGTTGTCTTGGGAATTCGTTTCTCATCTCTGCAGTCTTTGA-GGAAGAGAAGCTGAGACGTGGAGCCTGGATTTTCCTCTGTGGTCTGCAAACA----TTCAGCGCTTCT-CTAAGC-TCCCATAGCTGTTGTATTTGCTATTAAATGACCTAAAATTTGCTGGTAGTTT-GTTTTGACTGTTTCCTCATTTGGGGGCTCATTTTTGCATTTCTGA--GGGTATATATGAGCT-----TCCTTCCTCCTTGAGAGCAAACA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11487460 388 - 12463322 taaggatgtataaagaaattaggatagtgtctagcattcaaaagtgctGGCTGTTGTCAAAGTTACTCTTTTCATTTTTAATATAAAAATGGCGTGGGTGT-----TATAGG-------AGACAGATGTG---------------GGGGAGTGCAG---GTGAGCAGGGAGCTGTTGTCTTGGGAATTCGTTTCTCATCTCTGCAGTCTTTGA-GGAAGAGAAGCTGAGACGTGGAGCCTGGATTTTCCTCTGTGGTCTGCAAACA----TTCAGTGCTTCT-CTAAGC-TCCCATAGCTGTTGTATTTGCTATTAAATGACCTAAAATTTGCTGGTAGTTT-GTTTTGACTGTTTCCTCATTTGGGGGCTCATTTTTGCATTTCTGA--GGGTATATATGAGCT-----TCCTTCCTCCTTGAGAGCAAACA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156312502 388 + 157873769 taaggctgtataaagaaattaggagagtgtccagcattcaaaagtgctGGCTGTTGTCAAAGTTACTCTTTTCATTTTTAATATAAAAATGATGTCGGTGT-----TACAGG-------AGACAGATGTG---------------GGGGAGTGCAG---GTGAGCAGGGAGCTGTTGTCTTGGGATTTTGTTTCTCATCTCTGCAGTCTTTGA-GGAAGAGAAGCCCAGACCTGGAGCCTGGATTTCCCTCTGTGGTCTGCGAACA----TTCAGCGCTTCT-CTAAGC-TCCCATAGCTGTTGTATTTGCTATTAAATTACCTAAAATTTGCTGGTAGTTT-GTCTTGACTGTTTCCTCATTTGGGGGCTCATTTTTGCCTTTCTGA--GGGCGTATATGAGCT-----TCCTTCCTCCTTGAGAGCAAATA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170341916 388 + 172585720 taaggatatataaagaaatcaggatagtgtctagcattcaaaagtgctGGCTGTTGTCAAAGTTACTCTTTTCATTTTTAATATAAAAATGATGTGGGTGT-----TACAGG-------AGACAGATGTG---------------GGGGAGTGCAG---GTGAGCAGAGAACTGTTGTCTCGGGAATTCGTTTCTCATCTCTGCAGTCGTTGA-GGAAGAGAAGCTGAGACGTGGAGCCTGGATGTTCCTCTGTGGTCTGCAAACG----TTCAGCGCTTCT-CTAAGC-TCCCATAGCTGTTGTATTTGCTATTAAATGACCTAAAATTTGCTGGTAGTTT-GTCTTGACTGTTTCCTCGTTTGGGGGCTCCTTTTTGCCTTTCTGA--GGGTGTATATGAGCT-----TCTTTCCTCTTTGAGAGCAAACG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169087297 388 - 170955103 taaggatatataaagaaatcaggatagtgtctagcattcaaaagtgctGGCTGTTGTCAAAGTTACTCTTTTCATTTTTAATATAAAAATGATGTGGGTGT-----TACAGG-------AGACAGATGTG---------------GGGGAGTGCAG---GTGAGCAGAGAACTGTTGTCTCGGGAATTCGTTTCTCATCTCTGCAGTCGTTGA-GGAAGAGAAGCTGAGACGTGGAGCCTGGATGTTCCTCTGTGGTCTGCAAACG----TTCAGCGCTTCT-CTAAGC-TCCCATAGCTGTTGTATTTGCTATTAAATGACCTAAAATTTGCTGGTAGTTT-GTCTTGACTGTTTCCTCGTTTGGGGGCTCCTTTTTGCCTTTCTGA--GGGTGTATATGAGCT-----TCTTTCCTCTTTGAGAGCAAACG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8373843 388 + 10161646 taaggatatataaagaaatcaggatagtgtctagcattcaaaagtgctGGCTGTTGTCAAAGTTACTCTTTTCATTTTTAATATAAAAATGATGTGGGTGT-----TACAGG-------AGACAGATGTG---------------GGGGAGTGCAG---GTGAGCAGAGAACTGTTGTCTCGGGAATTCGTTTCTCATCTCTGCAGTCGTTGA-GGAAGAGAAGCTGAGACGTGGAGCCTGGATGTTCCTCTGTGGTCTGCAAACG----TTCAGCGCTTCT-CTAAGC-TCCCATAGCTGTTGTATTTGCTATTAAATGACCTAAAATTTGCTGGTAGTTT-GTCTTGACTGTTTCCTCGTTTGGGGGCTCCTTTTTGCCTTTCTGA--GGGTGTATATGAGCT-----TCTTTCCTCTTTGAGAGCAAACG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1405573 387 + 3144229 taaggatgtataaagaaatcaggatagtgtctagcattcaaaagtgctGGCTGTTGTCAAAGTTACTCTTTTCATTTTTAATATAAAAATGACGTGGGTGT-----TACAGG-------AGACAGATGTG---------------GGGGAGTGCAG---GTGAGCAGAGAACTGTTGTCTCGGGAATTCGTTTGTCATCTCTGCAGTCGTTGA-GGAAGAGAAGCTGAGACGTGGAGCCTGGAT-TTCCTCTGTGGTCTGCAAACG----TTCAGCGCTTCT-CTAAGC-TCCCATAGCTGTTGTATTTGCTATTAAACGACCTAAAATTTGCTGGTAGTTT-GTCTTGACTGTTTCCTCGTTTGGGGGCTCCTTTTTGCCTTTCTGA--GGGTGTATATGAGCT-----TCCTTCCCCCTTGAGAGCAAACG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96692121 384 + 98384682 taaggatatataaagaaatcaggatagtgtctagcattcaaaagtgctGGCTGTTGTCAAAGTTACTCTTTTCATTTTTAATATAAAAATGATGTGGGTGT-----TACAGG-------AGACAGATGTG---------------GGGGAGTGCAG---GTGAGCAGAG----GTTGTCTCGGGAATTCGTTTCTCATCTCTGCAGTCATTGA-GGAAGAGAAGCTGAGATGTGGAGCCTGGATGTTCCTCTGTGGTCTGCAAACG----TTCAGCGCTTCT-CTAAGC-TCCCATAGCTGTTGTATTTGCTATTAAATGACCTAAAATTTGCTGGTAGTTT-GTCTTGACTGTTTCCTCGTTTCGGGGCTCCTTTTTGCCTTTCTGA--GGGTGTATATGAGCT-----TCCTTCCCCCTTGAGAGCAAACA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8227821 388 - 10857215 taaggatgtataaagaaatcaggatagtgtctagcattcaaaagtgctGGCTGTTGTCAAAGTTACTCTTTTCATTTTTAATATAAAAATGACGTGGGTGT-----TACAGG-------AGACAGATGTG---------------GGGGAGTGCAG---GTGAGCAGAGAACTGTTGTCTCGGGAATTCGTTTCTCATCTCTGCAGTCGTTGA-GGAAGAGAAGCTGAGACTTGGAGCCTGGATTTCCCTCTGTGGTCTGCAAACG----TTCAGCGCTTCT-CTAAGC-TCCCATAGCTGTTGTATTTGCTATTAAATGACCTAAAATTTGCTGGTAGTTT-GTCTTGACTGTTTCCTCGTTTGGGGGCTCCTTTTTGCCTTTCTGA--GGGTGTATATGAGCT-----TCCTTCCCCCTTGAGAGCAAACG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15619594 388 - 23502949 tacagatgtataaagaaattaggacagtgtctagcattcaaaagtgctGGCTGTTGTCAAAGTTACTCTTTTCATTTTTAATGTAAAAATGGCTTGGGTGT-----TACAGG-------AGACAGATGTG---------------GGGGAATGCAG---GTGAGCAGAGAGCTGTTGTCTTGGGAATTCGTTTCTCATCTCTGCAGTCTTTGA-GGAAGAGAAGCTGAGACATGGAGCCTGGATTTTCCTCTGTGGTCTGCAAACG----TTCAGCATTTCT-CTAAGC-TCCCATAGCTGTTGTATTTGCTATTAAATGACCTAAAATGTGCTGGTAGTTT-GTCTTTACTGTTTCCTCATTTGGGAGCTCCTTTTTGCCATTCTGA--GCGTGTATATGAGCT-----TCCTTCCTCCTTGAGAGCAAACA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169901625 374 + 171630274 TAAGGATATATAAAGAAGTCAGGGTAGTGTCGAGCATTCAAAAGTCCCGGCTGTTGTCAGAGTTACTCTTTTCATTTTCAATATGAAAATGACATGGGTGT-----CACAGG-------GGACAGGCG-T---------------GGGCAGCGCAG---GTGAGTGGAGAGGTGCTGTCCTGGGAATTCCTTTCTCATCCCTGCAGTCTTTGAGGGAAGAGAAGCTGAGACCCGCACCCTGGGTTTTCCTCTGCGGTTTACAAACGTTTATTCAGTGCTTCT-CTAAGC-TCCC------------------ATTAAATCACCTAACGTTTGCTGGTAGGTT-GTCTTGGCTGTTTCCTGGTTTGGGGGCTCATTTTTGCCTTTGCGA--GGCTGCATGTGAGCT-----TCCTTCCCCCTTGAGAGCAAAGG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1305170 373 - 2905041 tcagcacatataaagaaataagggtagtgtctagcaTTCAA-------------------AGTTACTCTTTTCATTTTCAATATGAAAGTGACATGGGTGT-----TACAGG-------GGACAGGCATT---------------GGGGAGCACAG---GTGAGTGGAGAGGCGTTGTCCTGGGAACTCCTTTCTCAGCCCTGCAGTCTTTGA-GGAAGAGAAGCTGAGACATGCAGCCTGGGTTTTCCTCTGTGGTCTACAAACATTTATTCAGTGCTTCT-CCAAGC-TCCCATAGCTGCTGCATCTGCTATTAAATCACCTAACATTTGCTGGTAGGTT-GTCTTGGCTGGTTCCTGGTTTGGGGGCTCATTTTTGTCTTTCCAA--GGGTGCATATGAGCT-----TCCTTTCCCTTCGAGAGCAAACA i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1267601 392 - 2164891 taaggatatataaagaaatcagggtagtgtctagcattcaaaagtgctGGCTGTTGTCAAAGTTACTCTTTTCATTTTCAGTGTGAAAATGACATGGGTGT-----TACAGG-------GGACAGGCGTT---------------GGGGAGCGCAG---GTGAACCGAGAGGTGTTCTCCTGGGAATTCCTTTCTCAGCCCTGCAGTCTTTGA-GGAAGAGAAGCTGAGACATGTAGCCTGGGTTTTCCTCTGTGGTCTACAAACATTTATTCAGTGcttct-ctaagc-tcccatagctgctgtatctgctattaaatcacctaacatttgctggtaggtt-gtcttggctgtttactggtttgGGGGCTCATTTTTGCCTTTCCGA--GGGTGCATATGAGCT-----CCCTTCCCCTTTGAGAGCAAGCA i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1516363 392 - 1813869 taaggctatatgaagaactcagggtactgtctagcattcaaaagtgctGGCTGTTGTCAAAGTTACTCTTTTCATTTTCAATATGAAAATGACATGGGTGT-----TACAGG-------GGACAGGCATG---------------GAGGAGCGCAG---GTGAGTGGAGAGGGGTTGTCCTGGGAATTCCTTTCTCATCCCTGCAGTCTTTGA-GGAAGAGAAGCTGAGGCGTGCAGCCTGGGTTTTCCTCTGCAGTCTACAGACATTTATTCAGTGCTTCC-CTAAGT-TCCCATAGCTGCTGTACCTGCTGCTAAATCACCTAACATTTGCTGGTAGGTT-GTCTTGGCTGTTTCCTGGTTTAGGGGCTCATTTTTGCCTTTCCGA--GGGTGCATATGAGCG-----TCCTTCCCCCTCGAGAGCAAACA i aotNan1.NW_018494782v1 C 0 I 156 s otoGar3.GL873575 10957020 337 - 12073884 taagcgtgtgtaggtgaac--gctcagtgtccagcacttagaagcgctGGACATGGTCATAGTCACTGTTTCCATTTT-GTCGTGAGGATGAGGTGGGTGT-----GTTGGG----------CAGACC-------------------GTGGCACAG-----GGACTGAGGGGCACTGTCCC-TGAACTCATCTCTGCTCTCTGGAGCCCTTGA-GGAAGTGAAGCCCAGGTAGGGCCCCT------------------------------TTCTGGGCTCCT-ATGTGAGCCCCACAGCCCTCACATTCGCTACTGAATTGTCTGAAGCTCACTTCTAGGTCAACCTCTGTCATTTCCTGTTTCCTGGGCTCACTTCTGCCTTTCCAA----------ATCAGGT-----CACATGC------AGAAAAGTCG i otoGar3.GL873575 C 0 I 4 s canFam3.chr1 56182486 336 + 122678785 caagtacacacagatctcttagtacaacatctagcacT-GAGACTGTTGGCTACTGTCAAAATTATTATTT-----------ATGGGGAAGAGGAGGGTGTGGTGGTACAGGTTGGGTGGGGTGACCCTG---------------GAGGAGCAAAGTCAGTGGCCAGGAGCC-----TCCTGGGAGCTCAGCTC-----------ATCTTTGA----------------------------------CTTTTGGAGTTTCCACAAA----TTGTGCTGTTCT-CTCACC-CCCTGCCACCCCTGCATTGGGGACTAAGCCACGTGG-ACTTGGTGACGGGGG-CTCGTGATTATTCAT-------GGGGCTCACTTTTGCCTTTCCACCTCGGCTTGCATGAGCT-----TGCTTCCTCTTCGAGAGCAGGAA i canFam3.chr1 I 38 I 9 s dasNov3.JH569188 580974 393 + 760995 -----tcatggaaagtgtttagtgcagtatttgatactcaaaaatgctagatattgtcaaaattattattT----TTTAATTGTGAAAAAG---TAGATGT-----TGTAGA-------GAAAAGAACTGGTGGGATGAAACACAGAGGAGTATGA---AAGAACTGAGAGGTATTTTCCTGTCAGATCCTCTTTGAACTTTGGACTCCTCTC-AAAAGAGAAGTTGAAATATGCAGCATTGTTTTCCCTCTGTGATCATCAATCATTTATTCAGCTCTTCTGCTAAAC-TCCTGTAGTCTTTG----------TAAACTATCTAAAATTTGATGATGTAGT-GTCTTGGTGGTGTTCTGTTTCTTGGACTCACTTTTGCCTTTACACACAAGCTTATATGAGACAGAAAGACCACCTCTTTAAGGATAGAAA i dasNov3.JH569188 C 0 I 16 a score=21928.000000 s hg38.chr6_KB021644v2_alt 115406 2 + 185823 CT s panTro5.chr6 173571236 2 + 175400573 CT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171805056 2 + 173848474 CT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11487848 2 - 12463322 CT i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170342304 2 + 172585720 CT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169087685 2 - 170955103 CT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8374231 2 + 10161646 CT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1405960 2 + 3144229 CT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96692505 2 + 98384682 TT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8228209 2 - 10857215 CT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15619982 2 - 23502949 CT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169901999 2 + 171630274 CT i calJac3.chr4 C 0 I 3 s saiBol1.JH378287 1305543 2 - 2905041 CT i saiBol1.JH378287 C 0 I 3 s cebCap1.NW_016107695v1 1267993 2 - 2164891 CT i cebCap1.NW_016107695v1 C 0 I 94 s otoGar3.GL873575 10957361 2 - 12073884 CT i otoGar3.GL873575 I 4 C 0 s canFam3.chr1 56182831 2 + 122678785 CT i canFam3.chr1 I 9 C 0 s dasNov3.JH569188 581383 2 + 760995 CC i dasNov3.JH569188 I 16 C 0 e aotNan1.NW_018494782v1 1516755 156 - 1813869 I e nomLeu3.chr3 156312890 0 + 157873769 C a score=191536.000000 s hg38.chr6_KB021644v2_alt 115408 31 + 185823 TATTCTTCCGTG--AAA---C------------------------------------------------------------ATCCACTGTTCATCG s panTro5.chr6 173571238 31 + 175400573 TATTCTTCCGTG--AAA---C------------------------------------------------------------ATCCACTGTTCATCG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171805058 31 + 173848474 TATTCTTCCATG--AAA---C------------------------------------------------------------ATCCACTGTTCATCG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11487850 31 - 12463322 TATTCTTCCGTG--AAA---C------------------------------------------------------------ATCCACTGTTCATCG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156312890 30 + 157873769 -ATTATTCCGTG--AAA---C------------------------------------------------------------ATCCACTGTTCAGTG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170342306 31 + 172585720 TATTCTTCCGTG--AAA---C------------------------------------------------------------ATCCACTGTTCAGCG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169087687 31 - 170955103 TATTCTTCCGTG--AAA---C------------------------------------------------------------ATCCACTGTTCAGCG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8374233 31 + 10161646 TATTCTTCCGTG--AAA---C------------------------------------------------------------ATCCACTGTTCAGCG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1405962 31 + 3144229 TATTCTTCCGTG--AAG---C------------------------------------------------------------ATCCACTGTTCAGCG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96692507 31 + 98384682 TATTTTTCCATG--AAA---C------------------------------------------------------------ATCCACTGTTCAGCG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8228211 31 - 10857215 TATTCTTCCGTG--AAG---C------------------------------------------------------------ATCCACTGTTCAGCG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15619984 31 - 23502949 TATTCTTCCGTG--AAA---C------------------------------------------------------------ATCCACTGTTCAGCG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169902004 31 + 171630274 GCTTCTTCTGTG--AAA---T------------------------------------------------------------GTCCACTGCTCAGCA i calJac3.chr4 I 3 I 30 s saiBol1.JH378287 1305548 91 - 2905041 GCTTCTTCTGTG--AAA---TGCCCACGGCTCAGCACGGCAGTGGCAAGGCGTCCACGGCTCAGCACGGCAGTGGCGAGGCGTCCACGGCTCAGCA i saiBol1.JH378287 I 3 I 30 s otoGar3.GL873575 10957363 33 - 12073884 GATGCTTCTGTGCAAAC---C------------------------------------------------------------ACACACTGACTAGCA i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56182833 34 + 122678785 TCTGCTTCTCTG--GCATCCC------------------------------------------------------------GTGCACTGCCAGCCA i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 581385 27 + 760995 ---TATCTTGTC--ACC---C-------------------------------------------------------------TCCATAGAttagca i dasNov3.JH569188 C 0 C 0 e aotNan1.NW_018494782v1 1516755 156 - 1813869 I e cebCap1.NW_016107695v1 1267995 94 - 2164891 I a score=1245458.000000 s hg38.chr6_KB021644v2_alt 115439 139 + 185823 CAGCGGTGGGCATGCAG-------------AGCGCAGCTCA-----------------------------------GTCTCATT--GA-GGGGGTTGTTCCAACTGAGTTCAGTGACCACTGAGGGCTTAGCAAGATCTTAGGAACTAGACTCAAGGTCAAAGGGCTTCCCAGCTATCCAGGAGCTCCTT s panTro5.chr6 173571269 139 + 175400573 CAGCGGTGGGCATGCAG-------------AGCGCAGCTCA-----------------------------------GTCTCATT--GA-GGGGGTTGTTCCAACTGAGTTCAGTGACCACTGAGGGCTTAGCAAGATCTTAGGAACTAGACTCAAGGTCAAAGGGCTTCCCAGCTATCCAGGACCTCCTT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171805089 139 + 173848474 CAGCGGTGGGCATGCAG-------------AGCGCAGCTCA-----------------------------------GTCTCATT--GA-GGGGGTTGTTCCAACTGAGTTCAGTGACCACTGAGGGCTTAGCAAGATCTTAGGAACTAGACTCAAGGTCAAAGGGCTTCCCAGCTATCCAGGACCTCCTT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11487881 139 - 12463322 CAGCGGTGGGCATGCAG-------------AGCGCAGCTCA-----------------------------------GTCTCATT--GA-GGGGGTTGTTCCAACTGAGTTCAGTGACCACTGAGGGCTTAGCAAGATCTTAGGAACTAGACTCAAGGTCAAAGGGCTTCCCAGCTATCCAGGAGCTCCTT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156312920 138 + 157873769 CAGCGATGGGCATGCAG-------------AGCACAGCTCA-----------------------------------GACTCATT--GA-GGGGGTTGTTCCAACTGAGTTCAGTGACCACTGAGGGCTTAGCAAGATCTTAGGAACTAGACTCAAGGTCAAAGGGCTT-CCAGCTATCCAGGAGCTCCTT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170342337 139 + 172585720 CGGCGGTTGACGTGCAG-------------AGCGCAGCTCA-----------------------------------GACTCATT--GA-GGGGGTTGTTCCGTCTGAGTTCAGTGACCACTGAGGGCTTAGCAAGATCTTAGGAGCTAGACTCAAGGTCAGAGGACTTCCTAGCTATCCAGGAGTTCCTT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169087718 139 - 170955103 CGGCGGTTGACGTGCAG-------------AGCGCAGCTCA-----------------------------------GACTCATT--GA-GGGGGTTGTTCCGTCTGAGTTCAGTGACCACTGAGGGCTTAGCAAGATCTTAGGAGCTAGACTCAAGGTCAGAGGACTTCCTAGCTATCCAGGAGTTCCTT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8374264 139 + 10161646 CGGCGGTTGACGTGCAG-------------AGCGCAGCTCA-----------------------------------GACTCATT--GA-GGGGGTTGTTCCGTCTGAGTTCAGTGACCACTGAGGGCTTAGCAAGATCTTAGGAGCTAGACTCAAGGTCAGAGGACTTCCTAGCTATCCAGGAGTTCCTT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1405993 137 + 3144229 TGGCGGCTGGCGTGCAG-------------AGCGCAGCTC-------------------------------------ACTCATT--GA-GAGGGTTGTTCTGCCTGAGTTCAGTGACCACTGAGGGCTTAGCAAGATCTTAGGAGCTAGACTCAAGGTCAGAGGACTTCCTAGCTATCCAGGAGTTCTTT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96692538 136 + 98384682 TGGCGGCTGGCGTGCAG-------------AGCACAGTTC-------------------------------------ACTCATT--GA-G-GGGTTGTTCCACCTGAGTTCAGTGACCACTGAGGGCTTAGCAAGATCTTAGGAGCTAGACTCAAGGTCAGAGGACTTCCCAGCTATCCAGGAGTTCCTT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8228242 137 - 10857215 CGGCGGTTGACATGCAG-------------AGCACAGCTC-------------------------------------GCTCATT--GA-GAGGGTTGTTCTGCCTGAGTTCAGTGACCACTGAGGGCTTAGCAAGATCTTAGGAGCTAGACGCAAGGTCAGAGGACTTCCCAGCTATCCACTAGCTCCTT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15620015 174 - 23502949 CGGCGGTTGACGTGCAG-------------AGCACAGCTCACTCATTGCGCGGCGGTTGACGTGCAGAGCACAGCTCACTCATT--GC-GGGGGTAGTTCCGCCTGAGTTCAGTGACCACTGAGGGCTTAGCAAGATCTTAGGAGCTAGATTCAAGGTCAGAGGACTTCCTAGCTATCCAGGAGCTCCTT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169902065 139 + 171630274 CAGCGGTGGGCATGCCG-------------AGCACAGCTCA-----------------------------------GACTCCCT--GA-GGGGGTTGTTCTGACTGATTTCAGTGACTGTTGAGGGTTTAGGAAGATCTTGGGGACCAGAATCAAGGCCAAGGGACTTCCCAGCTATCCAGGAGCTCCTC i calJac3.chr4 I 30 C 0 s saiBol1.JH378287 1305669 140 - 2905041 CAGTGCTGGGCATGCCC-------------AGTGCAGCTCA-----------------------------------GACTCCCT--CAGGGGGGTTGTTCCAACTGATTTCAGTGACAGCTGAGGGTTTAGGAAGATCTTGGGGATGAGAATCAAGGCCAAGGGGCTTCCCAGCTATCCAGCAGCTCCTT i saiBol1.JH378287 I 30 C 0 s cebCap1.NW_016107695v1 1268089 135 - 2164891 CAGTGGTGGGCATGCCA-------------AGTACAGCTCA-----------------------------------GACTCCCT--GA-GGGGGTTGTT----CTGATTTCAGTGACAGCTGAGGGTTTAGGAAGATCTTGGGGACCAGAATCAAGGCCAAGGGGCTTCCCAGCTATCCAAGAGCTCCTT i cebCap1.NW_016107695v1 I 94 C 0 s aotNan1.NW_018494782v1 1516911 139 - 1813869 CAGTGGTGGGCATGCCG-------------AGTGCAGCTCA-----------------------------------GACTCCCT--GA-GGGGGTTGTTCCAACTGATTTCAGTGACAGCTGAGGGTTTAGGAAGATCTTGGGGACCAGAATCAAGGCCGAGGGGCTTCCCAGCTATCCAGGAGCTCCTT i aotNan1.NW_018494782v1 I 156 C 0 s otoGar3.GL873575 10957396 148 - 12073884 CAGCAGTGGGTGGGCAGGGAGCTC---ACAGGTGCAGCTGG-----------------------------------GACACAAG--GA-GGGGCTTGTTCTG-CTGAGTCCAAAAATTCCTGAGGGATGACGTGGGTCTTAGAAACTAGGCTCAGGGTCAAACAGCTCCCAGACCACCCAGGAGCTGCGT i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56182867 87 + 122678785 CAGCGATAGGCACCCCG-------------G---------------------------------------------GGGGCACT--GC-CCGGTTCCTCACAACCAGGTGAAG-GAAGTCTGGGGACTGA-------CCTGGGGGC--------------GGGTGCTTCC-------------------- i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 581412 151 + 760995 ---tagtgggcacccagtaagacctcaataaatAAAGACCAC----------------------------------GGCTCATTCAAA-GGGAGGTGTCCTGA-TGAGGTCCATAATTACTAAGGGTTTAGAGATTCCTTAGTTATTATGTTCAAGTACAAATGGTTTCCAGTCTATCTAGTCACTGCTT i dasNov3.JH569188 C 0 I 428 a score=49762.000000 s hg38.chr6_KB021644v2_alt 115578 5 + 185823 TAGAG s panTro5.chr6 173571408 5 + 175400573 TAGAG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171805228 5 + 173848474 TAGAG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11488020 5 - 12463322 TAGAG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156313058 5 + 157873769 TAGAT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170342476 5 + 172585720 TAGAG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169087857 5 - 170955103 TAGAG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8374403 5 + 10161646 TAGAG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1406130 5 + 3144229 TAGAG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96692674 5 + 98384682 TAGAG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8228379 5 - 10857215 TAGGG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15620189 5 - 23502949 TAGAG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169902204 5 + 171630274 CAGAG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1305809 5 - 2905041 CAGAG i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1268224 5 - 2164891 CAGAG i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1517050 5 - 1813869 CAGAG i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10957544 5 - 12073884 AAGAG i otoGar3.GL873575 C 0 C 0 e dasNov3.JH569188 581563 428 + 760995 I e canFam3.chr1 56182954 0 + 122678785 C a score=817524.000000 s hg38.chr6_KB021644v2_alt 115583 79 + 185823 AAGAACCTAAAATATTTG--TATGCCATTAGTGTTTCCCTAGCTTAGTTTTTGGCTGATTGTCCTGAATAGTCTATAATTG s panTro5.chr6 173571413 79 + 175400573 AAGAACCTAAAATATTTG--TATGCCATTAGTGTTTCCCTAGCTTAGTTTTTGGCTGATTGTCCTGAATAGTCTATAACTG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171805233 79 + 173848474 AAGAACCTAAAATATTTG--TATGCCATTAGTGTTTCCCTAGCTTAGTTTTTGGCTGATTGTCCTGAATAGTCTATAACTG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11488025 79 - 12463322 AAGAACCTAAAATATGTG--TATGCCATTAGTGTTTCCCTAGCTTGGTTTTTGGCTGATTGTCCTGAATAGTCTATAATTG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156313063 79 + 157873769 GACAACCTAAAATATTTG--TATGCCCTTAGTGTTTCCCTAGCTTAGCTTTTGGCTGATTGCCCTGAATAGTCTATAATTG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170342481 79 + 172585720 GAGAACCTGAAATATTTG--AATGCCCTTAGTGTTTTCCTAGCTTAGTTTTTGGCTGATCGTCCTGAATAGTCTATAATTG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169087862 79 - 170955103 GAGAACCTGAAATATTTG--AATGCCCTTAGTGTTTTCCTAGCTTAGTTTTTGGCTGATCGTCCTGAATAGTCTATAATTG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8374408 79 + 10161646 GAGAACCTGAAATATTTG--AATGCCCTTAGTGTTTTCTTAGCTTAGTTTTTGGCTGATCGTCCTGAATAGTCTATAATTG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1406135 79 + 3144229 GAGAACCTGAAATATTTG--AATGCCCTTAGTGTTTTCCTAGCTTAGTTTTTGGCTGATCGTCCTGAATAGTCTATAATTG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96692679 79 + 98384682 GAGAACCTGAAATATTTG--AATGCCCTTAGTGTTTTCCTAGCTTAGTTTTTGGCTGATTGTCCTGACTAGTCTATAATTG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8228384 79 - 10857215 GAGAACCTGAAATATTTG--AATGCCCTTAGTGTTTTCCTAGCTTAGTTTTTGGCTGATTGTCCTGACTAGTCTATAATTA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15620194 79 - 23502949 GAGAACCTGAAATATTTG--AATGCCCTTAGTGTTTTCCTAGCTTAATTTTTGGCTAATTGTCCTGAATAGTCTATAATTG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169902209 77 + 171630274 GAGAACCTACAATATTTG--TATGCCCTTAGTGTTTTCCTAGCT--GTTTTGGGCTGATTGCCCTGCATTCTCTATAATTG i calJac3.chr4 C 0 I 5 s saiBol1.JH378287 1305814 75 - 2905041 GAGAACCTA-AATGTTTG--TATGCCCTTAGTGTTTTCCTAGCTGAGTTTTTGGCTGATTGTCCTGAATTGTCTGTAA--- i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1268229 79 - 2164891 GAGAACCTAAAATGTTTG--TATGCCCTTAGTGTTTTCCTAACCGAGTTTTTGGTTGATTGTCCTCAACTGTCTATAATTG i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1517055 79 - 1813869 GAGAACCTAAAATGTTTG--TATGCCCTCAGTGTTTTCCTAGCTGAGTTTTTGGCTGATTGTCCTGAATTGTCTATAATTG i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10957549 76 - 12073884 GAAAGCCTAATGTGTTT----ATGACCTTAGTGATTCCTCAGCTTA-TTACGGGCTGATTATCCTGAATTGTCTGTAACTG i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56182954 43 + 122678785 ----GCCTG-------------TGACTTCAGT---------------------GCTGATTATCCTGAGCGGTCTGTGAGTG i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 581991 79 + 760995 -aAGAACTAAAATATTTGCTTATGACTTTACCATTTTCTTAGATTATTATTGGGCCTATTATCCTGAATTGTTTATAAAG- i dasNov3.JH569188 I 428 C 0 a score=10424.000000 s hg38.chr6_KB021644v2_alt 115662 1 + 185823 A s panTro5.chr6 173571492 1 + 175400573 A i panTro5.chr6 C 0 C 0 s panPan2.chr6 171805312 1 + 173848474 A i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11488104 1 - 12463322 A i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156313142 1 + 157873769 A i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170342560 1 + 172585720 A i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169087941 1 - 170955103 A i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8374487 1 + 10161646 A i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1406214 1 + 3144229 A i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96692758 1 + 98384682 A i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8228463 1 - 10857215 A i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15620273 1 - 23502949 A i colAng1.NW_012114488v1 C 0 C 0 s cebCap1.NW_016107695v1 1268308 1 - 2164891 A i cebCap1.NW_016107695v1 C 0 I 603 s aotNan1.NW_018494782v1 1517134 1 - 1813869 A i aotNan1.NW_018494782v1 C 0 I 606 s otoGar3.GL873575 10957625 1 - 12073884 A i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56182997 1 + 122678785 G i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 582070 1 + 760995 A i dasNov3.JH569188 C 0 C 0 e saiBol1.JH378287 1305889 0 - 2905041 C e calJac3.chr4 169902286 5 + 171630274 I a score=86379.000000 s hg38.chr6_KB021644v2_alt 115663 10 + 185823 GCCTGACAAT s panTro5.chr6 173571493 10 + 175400573 GCCTGACAAT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171805313 10 + 173848474 GCCTGACAAT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11488105 10 - 12463322 GCCTGACAAT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156313143 10 + 157873769 GCCTGACAAT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170342561 10 + 172585720 GCCTGACAAT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169087942 10 - 170955103 GCCTGACAAT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8374488 10 + 10161646 GCCTGACAAT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1406215 10 + 3144229 GCCTGACAAT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96692759 10 + 98384682 GCCTGACAAT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8228464 10 - 10857215 GCCTGACAAT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15620274 10 - 23502949 GCCTGACAAT i colAng1.NW_012114488v1 C 0 C 0 s saiBol1.JH378287 1305889 8 - 2905041 --CTGACAAT i saiBol1.JH378287 C 0 C 0 s otoGar3.GL873575 10957626 5 - 12073884 GCCTG----- i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56182998 10 + 122678785 GCCTGCCAAT i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 582071 10 + 760995 GTCTGTCAGT i dasNov3.JH569188 C 0 C 0 e aotNan1.NW_018494782v1 1517135 606 - 1813869 I e cebCap1.NW_016107695v1 1268309 603 - 2164891 I e calJac3.chr4 169902286 5 + 171630274 I a score=3587557.000000 s hg38.chr6_KB021644v2_alt 115673 601 + 185823 TAC-TATTGCACCCTAATGTATACA--CAGCCGTTTATTCATTTATATCTTTGACGATTTCTTAATGG-AAGCCATGAACTAAGCTGGGCACTGTGCTCAGAATTAGCATAAAGAAGGCAGAGTCGAAGAACCTCACATTGTAATGAAA----------AAATTTGATATAAACATGTAATTAAAATAAGATTAC---------------TGCACTATATTAGAAA-----------ATATATGCAGTTA----------ATGTTGCAA--ACAGAGAGGCAAGCAATGTAATCCAAGTTTCAAGAACATTTTAACTGAATAA------------TCCTTGGTAGGG-AGGCCATTCTAAGCTGAGCCGCAGAACCTTCAGAAGGCAAGGTGTGTCCGATGGCTGATGAAGGGTCTGTTGTAGCTTAAACCTGGAGCTCACAGAGGAAAGGGGGCACAAGATGACAGAGAT-------GGGTGGATTCCATGTAGACTTATGAGCTACGGAGGAGTTCAGGCTCCA------------------------------GCCTAC-----AGACTTGACCAGATTTGAGTGTTTATAAAGAAAATCCTGGAGACAA--GTA-GAATGTGCTTTTGGGAACGG-AGAG-CTGAAATCTGA---AACATCAGG---TATGCCAGTCTTTGAATGGTCTGTGTGTGAGACCATGATATCCCGTGA s panTro5.chr6 173571503 601 + 175400573 TAC-TATTGCACCCTAATGTATACA--CACCCGTTTATTCATGTATATCTTTGACGGTTTCTTAATGG-AAGCCATGAACTAAGCTGGGCACTGTGCTCAGAATTAGCATAAAGAAGGCAGAGTCGAAGAACCTCACATTGTAATGAAA----------AAATTTGATATAAACATGTAATTAAAATAAGATTAC---------------TGCATTATATTAGAAA-----------ATATATGCAGTTA----------ATGTTGCAA--ACAGAGAGGCAAGCAATGTAATCCAAGTTTCAAGAACATTTTAACTGAATAA------------TCCTTGGGAGGG-AGGCCATTCTAAGCTGAGCCGCAGAACCTTCAGAAGGCAAGGTGTGTCCGATGGCTGATGAAGGGTCTGTTGTAGCTTAAACCTGGAGCTCACAGAGGAAAGGGGGCACAAGATGACAGAGAT-------GGGTGGATTCCATGTAGACTTATGAGCTATGGAGGAGTTCAGGCTCCA------------------------------GCCTAC-----AGACTTGAGCAGATTTGAGTGTTTATAAAGAAAATCCTGGAGACAA--GTA-GAATGTGCTTTTGGGAATGG-AGAG-CTGAAATCTGA---AACATCAGG---TATGCCAGTCTTTGAATGGTCTGTGTGTGAGACCATGATATCCCGTGA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171805323 601 + 173848474 TAC-TATTGCACCCTAATGTATACA--CACCCGTTTATTCATTTATATCTTTGACGGTTTCTTAATGG-AAGCCATGAACTAAGCTGGGCACTGTGCTCAGAATTAGCATAAAGAAGGCAGAGTCGAAGAACCTCACATTGTAATGAAA----------AAATTTGATATAAACATGTAATTAAAATAAGATTAC---------------TGCATTATATTAGAAA-----------ATATATGCAGTTA----------ATGTTGCAA--ACAGAGAGGCAAGCAATGTAATCCAAGTTTCAAGAACATTTTAACTGAATAA------------TCCTTGGGAGGG-AGGCCATTCTAAGCTGAGCCGCAGAACCTTCAGAAGGCAAGGTGTGTCCGATGGCTGATGAAGGGTCTGTTGTAGCTTAAACCTGGAGCTCACAGAGGAAAGGGGGCACAAGATGACAGAGAT-------GGGTGGATTCCATGTAGACTTATGAGCTATGGAGGAGTTCAGGCTCCA------------------------------GCCTAC-----AGACTTGAGCAGATTTGAGTGTTTATAAAGAAAATCCTGGAGACAA--GTA-GAATGTGCTTTTGGGAACGG-AGAG-CTGAAATCTGA---AACATCAGG---TATGCCAGTCTTTGAATGGTCTGTGTGTGAGACCATGATATCCCGTGA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11488115 599 - 12463322 TAC-TATTGCACCCTAAT-TATACA--CACCC-TTTATTCATTTATATCTTTGACGATTTCTTAATGG-AAGCCATGAACTAAGCTGGGCACTGTGCTCAGAATTAGCATAAAGAAGGCAGAGTCGAAGAACCTCACATTGTAATGAAA----------AAATTTGATATAAACATGTAATTAAAATAAGATTAC---------------TGCATTATATTAGAAA-----------ATATATGCAGTTA----------ATGTTGCAA--ACAGAGAGGCAAGCAATGTAATCCAAGTTTCAAGAACATTTTAACTGAATAA------------TCCTTGGTAGGG-AGGCCATTCTAAGCTGAGCCGCAGAACCTTCAGAAGGCAAGGTGTGTCCGATGGCTGATGAAGGGTCTGTTGTAGCTTAAACCTGGAGCTCACAGAGGAAAGGGGGCACAAGATGACAGAGAT-------GGGTGGATTCCATGTAGACTTATGAGCTACGGAGGAGTTCAGGCTCCA------------------------------GCCTAC-----AGACTTGAGCAGATTTGAGTGTTTATAAAGAAAATCCTGGAGACAA--GTA-GAATGTGCTTTTGGGAATGG-AGAG-CTGAAATCTGA---AACATCAGG---TATGCCAGTCTTTGAATGGTCTGTGTGTGAGACCATGATATCCCGTGA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156313153 589 + 157873769 TAC-TATTGCACCCTAATGTATACA--CACCCGTTTATTCATTTATATCTTTGACGATTTCTTAATGG-AAGCCATGAACTAAGCTGGGCACTGTGCTCAGAATTAGCA------------AGTCGAAGAACCTCACATTGTGATGAAA----------AAATTTGATATAAACATGTAATTAAAATAAGATTAC---------------TGCATTATATTAGAAA-----------ATATATGCAGTTA----------ACGTTGCAA--ACAGAGAGGCAAGCAATGTAATCCAAGTTTCAAGAACATTTTGACTGAATAA------------TCCTTGGTGGGG-AGGCCATTCTAAGCTGGGCTACAGAACCTCCAGAAGGCAAGGTGTGTCTGATGGCTGATGAAGGGTCTGCTGTAGCTTAAACCTGGAGCTCACTGAGGAAAGGGGGCACAAGATGACAGAGAT-------GGGTGGATTCCATGGAGACTTATGAGCTACAGAGGAGTTCAGGCTCCA------------------------------GCCTAC-----AGACTTGAGCAGATTTGAGTGTTTATAAAGAAAATCCTGGAGACAA--GTA-GAATGTGCTTTTGGGAACAG-AGAG-CTGAAATCTGA---AACATCAGG---TATGCCAGTCTTTGAATGGTCTGTGTGTGAGACCATCATATCCCATGA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170342571 598 + 172585720 TAC-TGTTGCCCACTAATGTATACA--CACCCATTTATTCATTTATATCTTTGACAATTTCTTAACGG-AAGCCATGAGCTAAGCTGGGCGCTGTGCTCAGAATTCGCATAAAGAAGGTAGAGTTGAAGAACCTCACATTACCATGCAA----------AAATTTGAGATAAACATGTCATTAAAATAAGATTAC---------------TGCATTATGTTAGAAA-----------ATATGTGCCTTTA----------ACGTTGCAA--ACAGAGAGACAAGCAATGTAATCCAAGTTTCAAGAACATTTTAACTGAATAA------------TCCTTCGTAGGG-AGGCCGTGCAAAGCTGAGCCGCAGAGCCTTCAGAAGACAAGCTGTGTCCGACGGCCGAGGAAGAGTCTTTTGTAGCTTAAACCTGGAGCTCACAGAGGAAAGGGGGCACAAGATGACAGAGAC-------GGGTGGATTCCATGGagacttacgagctac---ggagttcaggctcca------------------------------gactac-----agactTGAGCAGATTTGAGTGTTTATAAAGAAAATCCTGGAGACAA--GTA-GAATGTGCTTTTGGGAACAG-AGAG-CTGAAATCTGA---AACATCAGG---TATGCCAGTCTTTGAATGGTCTGTGTGTGAGACCATGATATCCCGTGA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169087952 601 - 170955103 TAC-TGTTGCCCACTAATGTATACA--CACCCATTTATTCATTTATATCTTTGACAATTTCTTAACGG-AAGCCATAAGCTAAGCTGGGCGCTGTGCTCAGAATTCGCATAAAGAAGGTAGAGTTGAAGAACCTCACATTGCCATGCAA----------AAATTTGAGATAAACATGTCATTAAAATAAGATTAC---------------TGCATTATGTTAGAAA-----------ATATGTGCCTTTA----------ACGTTGCAA--ACAGAGAGACAAGCAAAGTAATCCATGTTTCAAGAACATTTTAACTGAATAA------------TCCTTCGTAGGG-AGGCCGTGCAAAGCTGAGCCGCAGAGCCTTCAGAAGACAAGCTGTGTCCGACGGCCGAGGAAGAGTCTTTTGTAGCTTAAACCTGGAGCTCACAGAGGAAAGGGGGCACAAGATGACAGAGAC-------GGGTGGATTCCATGGAGACTTACGAGCTACGGAGGAGTTCAGGCTCCA------------------------------GACTAC-----AGACTTGAGCAGATTTGAGTGTTTATAAAGAAAATCCTGGAGACAA--GTA-GAATGTGCTTTTGGGAACAG-AGAG-CTGAAATCTGA---AACATCAGG---TATGCCAGTCTTTGAATGGTCTGTGTGTGAGACCATGATATCCCATGA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8374498 601 + 10161646 TAC-TGTTGCCCACTAATGTATACA--CACCCATTTATTCATTTATATCTTTGACAATTTCTTAACGG-AAGCCATGAGCTAAGCTGGGCGCTGTGCTCAGAATTCGCATAAAGAAGGTAGAGTTGAAGAACCTCACATTGCCATGCAA----------AAATTTGAGATAAACATGTCATTAAAATAAGATTAC---------------TGCATTATGTTAGAAA-----------ATATGTGCCTTTA----------ACGTTGCAA--ACAGAGAGACAAGCAATGTAATCCAAGTTTCAAGAACATTTTAACTGAATAA------------TCCTTCGTAGGG-AGGCCGTGCAAAGCTGAGCCGCAGAGCCTTCAGAAGACAAGCTGTGTCCGATGGCCGAGGAAGAGTCTTTTGTAGCTTAAACCTGGAGCTCACAGAGGAAAGGGGGCACAAGATGACAGAGAC-------GGGTGGATTCCATGGAGACTTACGAGCTACGGAGGAGTTCAGGCTCCA------------------------------GACTAC-----AGACTTGAGCAGATTTGAGTGTTTATAAAGAAAATCCTGGAGACAA--GTA-GAATGTGCTTTTGGGAACAG-AGAG-CTGAAATCTGA---AACATCAGG---TATGCCAGTCTTTGAATGGTCTGTGTGTGAGACCATGATATCCCGTGA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1406225 601 + 3144229 TAC-TGTTGCCCACTAATGTATACA--CACCCATTTATTCATTTATATCTTTGACAATTTCTTAACGG-AAGCCATGAGCTAAGCTGGGCACTGTGCTCAGAATTCGCATAAAGAAGGTAGAGTCGAAGAACCTCACACTGCCATGCAA----------AAATTTGACATAAACATGTCATTAAAATAAGATTAC---------------TGCATTATGTTAGAAA-----------ATATGTGCCGTTA----------ACATTGCAA--ACAGAGAGACAAGCAATGTAATCCAAGTTTTAAGAACATTTTAACTGAATAA------------TCCTTGGTAGGG-AGGCCGTGCTAAGCCGAGCCGCAGAGCCTTCAGAAGACAAGCTGTGTCCGACGGCTGAGGAAGAGTCTTTTGTAGCTTAAACCTGGAGCTCACAGAGGAAAGGGGGCACAAGATGACAGAGAC-------GGGTGGATTCCATGGAGACTTACGATCTACGGAGGAGTTCAGGCTCCA------------------------------GACTAC-----AGACTTGAGCAGATTTGAGTGTTTATAAAGAAAATCCAGGAGACAA--GTA-GAATGTGCTTTTGGGAACAG-AGAG-CTGAAATCTGA---AACATCAGG---TATGCCAGTCTTTGAATGGTCTGTGTGTGAGACCATGATATCCCGTGA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96692769 602 + 98384682 CAC-TGTTGCCCACTAATGTATACA--CACTCATTTATTCATTCATATCTTTGACAGTTTCTTAACGGTAAGCCATGAGCTCAGCTGGGCGCTGTGCTCAGAATTCGCCTAAAGAAGGTAAAGTCGAAAAACCTCACATTGCCATGCAA----------AAATTTGAGATAAACGTGCCATTAAAATAAGATTAC---------------TGCATTATGTTAGAAA-----------ATATGTGCCGTTA----------ACGTTGCAA--ACAGAGAGACAAGCAATGTAATCCAAGTTTCAAGAACATTTTAACTGAATAA------------TCCTTGGTAGAG-AGGCCGTGCTAAGCTGAGCCGCAGAGCCTTCAGAAGACAAGCTGTGTCCGACGGCCGAGGAAGAGTCTTTTGTAGCTTAAACCTGGAGCTCACAGAGGAAAGGGGCCACAAGATGACAGAGAC-------GGGTGGATTCCATGGAGACTTACGAGCTACGGAGGAGttcaggctcca------------------------------gactac-----agacttgagcagatttgagtatttataaagaaaatcctggagacaa--ata-gaatgtgcttctgggaacag-agag-ctgaaatctGA---AACATCAGG---TATGCCAGTCTTTGAATGGTCTGTGTGTGAGACCATGATACCCCACGA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8228474 601 - 10857215 TAC-TGTTGCCCACTAATGTACACA--CACCCATTTATTCATTTATATCTTTGACAATTTCTTAACGG-AAGCCATGAGCTAAGCTGGGCGCCGTGCTCAGAATTCACATAAAGAAGGTAGAGTCGAAGAACCTCACACTGCCATGCAA----------AAATTTGACATAAACATGTCATTAAAATAAGATTAC---------------TGCATTATGTTAGAAA-----------ATGTGTGCCGTTA----------ACATTGCAA--ACAGAGAGACAAGCAATGTAATCCAAGTTTCAAGAACATTTTAACTGAATAA------------TCCTTGGTAGGG-AGGCCGTGCTAAGCTGAGCCGCAGAGCCTTCAGAAGACAAGCTGTGTCCGACGGCCGAGGAAGAGTCTTTTATAGCTTAAACCTGGAGCTCACAGAGGAAAGGGGGCACAAGATGACAGAGAC-------GGGTGGATTCCATGGAGACTCACGAGCTACGGAGGAGTTCAGGCTCCA------------------------------GACTAC-----AGACTTGAGCAGATTTGAGTGTTTATAAAGAAAATTCTGGAGACAA--GTA-GAATGTGCTTTTGGGAACAG-AGAG-CTGAAATCTGA---AACATCAGG---TATGCCAGTCTTTGAATGGTCTGTGTGTGAGACCATGATATCCCGTGA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15620284 601 - 23502949 TAC-TGTTGCCCACTAATGTATACA--CACCCATTTATTCATTTATATCTTTGACAGTTTCTTGAAGG-AAGCCATGAGCTAAGCTGGGTGCTGTGCTCAGAATTGGCATAAAGAAGGTAGAGTTGAAGAACCTCACATTGCCATGCAA----------AAATTTGAGATAAACATGTCATTAAAATAAGATTAC---------------TGCATTATGTTAGAAA-----------ATATGTGCCGTTA----------ACATTGCAA--ACAGAGAGACAAGCAATGTAATCCAAGTTTCAAGAACATTTTAACTGAATAA------------TCCTTGGTGGGG-AGGCCATGCTAAGCTGAACCGCAGAACCTTCAGAAGGCAAGCTGTGTCCAACGGCCGAGGAAGGGTCTTTTGTAGCTTAAACCTGGAGCTCACAGAGGAAAGGGGGCACAAGATGACAGAGAT-------GGGTGGATTCCATGGAGACTTATGAGCTACGGAGGAGTTCAGGTTCCA------------------------------GCCTAC-----AGACTTGAGCAGATTTGAGTATTTATAAAGAAAATCCTGGAGACAA--ATA-GAATGTGCTTCTGGGAACAG-AGAG-CTGAAATCTGA---AACATCAAG---TATGCCAGTCTTTGAATGGTCTGTGTGTGAGACCATGATATTGCGTGA i colAng1.NW_012114488v1 C 0 C 0 s otoGar3.GL873575 10957631 527 - 12073884 -------TGGACCCAATTATATGCA--TGGAC--TTGCTCattcatttcttcaacaatttctttatgg-agggcctgcacca-----ggcactgtGCACAGGCTTAGCAGGAGCAGGGTAGAGTGGAAGGACCTTGCGTTTCCATGGAA----------GGGTTAGATAAAAGCATGTAACTGAAATGAGATCAC---------------TGCATTATATGAGGAA-----------ATACAGGTAAATT----------ATTTTCTGA--CCAGAGACG-ATGCAATTTAACCCAAGTTTCCAGAACTTGTTCA-TGAATGATGTCTGAGAGTTTCCTTGGTGGGG-AAGCCGTGCTGAGCT-----------------GAAGGCACCTCCCCGCTGACGGGCAGAGAGGAGGCTGCTG-GGCGTAGACCTGGCAATCCCAGGGCAA--GGGGCGGAAGGTGGCAGGGCT-------GGG------CCCT--------------------GGAGTT-----------------------------------------------------------CAGACTTGAGTGTTGTTGAAGGAAAGCCCGGAGTCGG--GAAGGAATGTGGTTTGGGGAATGTCAGGG-CTGACGTCTGAAGGAATATCAAG---CAGGGACGTTCTCCAGCAGTC------CAAGGCCATGAAACCCTGCGA i otoGar3.GL873575 C 0 I 2272 s canFam3.chr1 56183008 360 + 122678785 CAC-TCACACTCTCCAGT-TACACAGTCATTCGTGTCTTCCCTAATTTCTCTGCCCATTTCTTTATTG-TGGTCCTGCACCAAGTGAGGCCCTGTGCCCGGAACCAGCGTGAATGAGGTGGA----------CTTGCTTTGTCA---------------------GATGCAGATGTGTCATTACAATAAG---AC---------------TGTGTTGTACAGGAAT-----------ATGTGCACGGT------------GCTTTGAAA--CCAGAGAAGCCAGCAATTCAATGGGTGTTTCAGGGAC---------------------------TCC------------------CTAAGC----------------------------------------------------------------------------------------------------GACAGCGAC-------GGA--------------------GAGCTCTGTGGCAGGT-------------------------------------------------------------------------------AACAGTCCTGGAGG---------GCGTGCTCACCTGGCAGCAG-GG----TGGAGCATGG-----CGTCAGGGCCCGTGGCAGCTGTGTGATGGTCTGGGTGGGAG------------TGTGA i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 582081 677 + 760995 CACTTGTTATACACCAAT-TACAGG--TATA-----------TCATTTCTTTGACAATTTCTTTTTTG-AAGGCCTACAGTGAGGTAGGCACTGTGCTCAGAATTATTATAAACAAGACATAGTTGAAGAAAATCATGTTGTGATGGAAGACAAAATACAAGGAAGATGTAAATCTATCATTAAGAT--GATTACATAATGatatatatatacataattatatatatatacataattatatatatatttatttatatatTACTTTGACATGAAAGAGATGGAAGACATTTAGCCCAT-TTCCAGGGACTCCTTCCCTAAATAATGAGTGACTT--TGCTTGTTGGGGAAGGCCATTCTAAGCTAAGCCATCGTGCTTTGAAAAGATGTAGTCTATCTCATGGACAATGAAGAGTTTGGTTTGGCTCATGC------------AAGGAGGAAAGGTAAACAATTACAGAGGTTAGGAAGGGACAGATTCTTT-AATTCTTCTGATATATGAAGGAGTTTAGATTCTAAATGGAAAAGGGAGTTAGAGAAGCTTAAATGACCACAAGAGAGATTTGAACAAATTCTAATGTTTATAA-GAAAATCCCAGAGACAAAGGTA-GAATGTGGATTTGGAAGCTT-AGGGTCTAAAACCTGA---ACTGTTGGT---TAGGCCACTTTTGGAATAGTCTGAATGGGAGATCCTGGAAGCCTGTGA i dasNov3.JH569188 C 0 I 3 e saiBol1.JH378287 1305897 0 - 2905041 C e aotNan1.NW_018494782v1 1517135 606 - 1813869 I e cebCap1.NW_016107695v1 1268309 603 - 2164891 I e calJac3.chr4 169902286 5 + 171630274 I a score=912050.000000 s hg38.chr6_KB021644v2_alt 116274 155 + 185823 TGTGACAC-AGGGGTCAGGGTTGCAAGGTGTGTGAGAAGCAGAAGTCATTACTTGACGAGCCA----GTC-ATTTCCACAGCTCCCAACAA-GGAGACGGAAGCTCTGCGTTTCTTAGAGCCCAGTCCTG--GGTCCCATGACACAC-------ACATTTTGCTTTGGTGT s panTro5.chr6 173572104 155 + 175400573 TGTGACAC-AGGGGTCAGGGTTGCAAGATGTGTGAGAAGCAGAAGTCATTACTTGATAAGCCA----ATC-ATTTCCACAGCTCCCAACAA-GGAGACGGAAGCTCTGCGTTTCTTAGAGCCCAGTCCTG--GGTCCCATGACACAC-------ACATTTTGCTTTGGTGT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171805924 155 + 173848474 TGTGACAC-AGGGGTCAGGGTTGCAAGATGTGTGAGAAGCAGAAGTCATTACTTGATAAGCCA----ATC-ATTTCCACAGCTCCCAACAA-GGAGACGGAAGCTCTGCGTTTCTTAGAGCCCAGTCCTG--GGTCCCATGACACAC-------ACATTTTGCTTTGGTGT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11488714 155 - 12463322 TGTGACAC-AGGGGTCAGGGTTGCAAGATGTGTGAGAAGCAGAAGTCATTACTCGATAAGCCA----ATC-ATTTCCACAGCTCCCAACAA-GGAGACGGAAGCTCTGCGTTTCTTAGAGCCCAGTCCTG--GGTCCCATGACACAC-------ACATTTTGCTTTGGTGT i gorGor5.CYUI01015032v1 C 0 I 146 s nomLeu3.chr3 156313742 156 + 157873769 TGTGAGGCAAGGGGTCAGGGTTGCAAGATGTGTGAGAAGCAGAAGTCATTACTTGATAAGCCA----ATC-ATTTCCACAGCTCCCAGCAA-GGAGACGGAAGCTCTGCATTTCTTAGAGCCCTGTCCTG--GGTCCCATGACACAC-------ACATTTTGCTTTGGTGT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170343169 156 + 172585720 TGTGACGCAGGGGGTCAGGGTTGCAAGATGTGTGAGAAGCAGAAGTCATCACTTGATAAGCCA----ATC-ATTTCCACAGCTCCCAGCAA-GGAGGCGGAAGCTCTGCGTTTCCTAGAGTCCAGTTCTG--GGCCCCATGACACAC-------ACATTTTGCCATGGTGT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169088553 156 - 170955103 TGTGACGCAGGGGGTCAGGGTTGCAAGATGTGTGAGAAGCAGAAGTCATCACTTGATAAGCCA----ATC-ATTTCCACAGCTCCCAGCAA-GGAGGCGGAAGCTCTGCGTTTCCTAGAGTCCAGTTCTG--GGCCCCATGACACAC-------ACATTTTGCCATGGTGT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8375099 156 + 10161646 TGTGACGCAGGGGGTCAGGGTTGCAAGATGTGTGAGAAGCAGAAGTCATCACTTGATAAGCCA----ATC-ATTTCCACAGCTCCCAGCAA-GGAGGCGGAAGCTCTGCGTTTCCTAGAGTCCAGTTCTG--GGCCCCATGACACAC-------ACATTTTGCCATGGTGT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1406826 156 + 3144229 TGTGACGCAGGGGGTCAGGGTTGCAAGATGTGTGAGAAGCAGAAGTCATCACTTGATAAGCCA----ATC-ATTTCCACAGCTCCCAGCAA-GGAGGCGGAAGCTCTGCGTTTCCTAGAGTCCAGTTCTG--GGCCCCACGACACAC-------ACATTTTGCCATGGTGT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96693371 156 + 98384682 TGTGACGCAGGGGGTCAGGGTTGCAAGATGTGTGAGAAGCAGAAGTCATCACTTGATAAGCCA----ATC-ATTTCCACAGCTCCCAGCAA-GGAGGTGGAAGCTCTGTGTTTCTTAGAGTCCAGTTCTG--GGCCCCATGACACAC-------ACATTTTGCCATGGTGT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8229075 156 - 10857215 TGTGACGCAGGGGGTCAGGGTTGCAAGATATGTGAGAAGCAGAAGTCATCACTTGATAAGCCA----ATC-ATTTCCACAGCTCCCAGCAA-GGAGGTGGAAGCTCTGTGTTTCTTAGAGTCCAGTTCTG--GGCCCCATAACACAC-------ACATTTTGCCATGGTGT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15620885 156 - 23502949 TGTGATGCAGGGGGTCAGGGTTGCAAGATGTGTGAGAAGCAGAAGTCATCACTTGATAAGCCA----ATC-ATTTCCACAGCTCCCAGCAA-GGAGGCGGAAGCTCAGAGTTTCTTAGAGTCCAGTTCTG--GGCCCCATGACACAC-------ACATTTTGCCATGGTGT i colAng1.NW_012114488v1 C 0 C 0 s canFam3.chr1 56183368 108 + 122678785 CGTGGTAC----------------------------------AAGTCATCATTTTGT-AGCCACCACCTG-GTTCCAACAGCAGCCAGTAA-CGGGG-AGAAGCTCTG-GCTCCTTCACGTCCTTTCCGGCTGGCGGCTTGCGACCT------------------------ i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 582761 163 + 760995 TGTGGCCATGGGGG--AGGTTTGTAACATACAGGAAAATTAAAAGCCACCATTTTATATACCA----AGCTATTTCTAGAACATCCAGTAATGAAAACAGAAGCTTTATATTTCTTACAAGGCTTTCCCA--GATCTCACAGCATATGTATTATATATTTTACTATATAGT i dasNov3.JH569188 I 3 C 0 e otoGar3.GL873575 10958158 2272 - 12073884 I e saiBol1.JH378287 1305897 0 - 2905041 C e aotNan1.NW_018494782v1 1517135 606 - 1813869 I e cebCap1.NW_016107695v1 1268309 603 - 2164891 I e calJac3.chr4 169902286 5 + 171630274 I a score=837659.000000 s hg38.chr6_KB021644v2_alt 116429 130 + 185823 AGAACGCAGAACAGTGGCCTAAAGCAAATAAAATTATTTAATATGGAAATAGTAGA-----ATATAGACAAATTGT----AGAAAATGGGGTTGATGGT-GTCTGCAGTGCTGACATATTGCGGGAATAGCGAAGATTTC s panTro5.chr6 173572259 130 + 175400573 AGAAGGCAGAACGGTGGCCTAAAGCAAATAAAATTATTTAATATGGAAATAGTAGA-----ATATAGACAAATTGT----AGAAAATGGGGTTGATGGT-GTCTGCAGTGCTGACGTATTGCGGAAATAGCGAAGATTTC i panTro5.chr6 C 0 I 292 s panPan2.chr6 171806079 130 + 173848474 AGAAGGCAGAACGGTGGCCTAAAGCAAATAAAATTATTTAATATGGAAATAGTAGA-----ATATAGACAAATTGT----AGAAAATGGGGTTGATGGT-GTCTGCAGTGCTGACGTATTGCGGAAATAGCGAAGATTTC i panPan2.chr6 C 0 I 292 s gorGor5.CYUI01015032v1 11489015 130 - 12463322 AGAACGCAGAACGGTGGCCTAAAGCAAATAAAATTATTTAATATAGAGATAGTAGA-----ATATAGACAAATTGT----GGAAAATGGGGTTGATGGT-GTCTGCAGTGCTGACATATTGCGGGAATAGCGAAGATTTC i gorGor5.CYUI01015032v1 I 146 C 0 s nomLeu3.chr3 156313898 130 + 157873769 AGAATGCAGAACGGTGGCTTAAAGCAAATAAAATTATTTAATGTGGAAATAGTAGA-----ATATAGACAAATTGT----AGAAAATGAGGTTGATGGT-GTCTGCAGTGATGACATATTGCGGGAACAGCAAAGATTTC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170343325 130 + 172585720 AGAACGCAGAACGGTGGCCTAAAGCAAATAAAATTATTTAATATAGAAATAGTAGA-----ATATAGACAAATTGT----AGAAAATGAGGTTGATGGT-GTCTGCAATGATGACATATTGCAGGAATACTAAAGATTTC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169088709 130 - 170955103 AGAACGCAGAACGGTGGCCTAAAGCAAATAAAATTATTTAATATAGAAATAGTAGA-----ATATAGACAAATTGT----AGAAAATGAGGTTGATGGT-GTCTGCAATGATGACATATTGCAGGAATACTAAAGATTTC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8375255 130 + 10161646 AGAACGCAGAACGGTGGCCTAAAGCAAATAAAATTATTTAATATAGAAATAGTAGA-----ATATAGACAAATTGT----AGAAAATGAGGTTGATGGT-GTCTGCAATGATGACATATTGCAGGAATACTAAAGATTTC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1406982 130 + 3144229 AGAACGCAGAACGGTAGCCTAAAGCAAATAAAATTATTTAATATAGAAATAGTAGA-----ATATAGACAAATTGT----AGAAAATGAGGTTGATGGT-GCCTGCAATGATGACATATTGCAGGAATAGTAAAGATTTC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96693527 130 + 98384682 AGAACGCAGAACGGTGGCCTAAAGCAAATAAAATTATTTAATATAGAAATAGTAGA-----ATATAGACAAATTGT----AGAAAATGAGGTTGATTGT-GTCTGCAATGATGACATATTTCAGGAATAGTAAAGATTTC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8229231 130 - 10857215 AGAACGCAGAACGGTGGCCTAAAGCACATAAAATTATTTAATATAGAAATAGTAGA-----ATATAGACAAATTGT----AGAAAATGAGGTTGATGGT-GCCTGCAATGATGACATATTGCAGGAATAGTAAAGATTTC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15621041 129 - 23502949 AGACCGCAGAACGGT-GCCCAAAGCAAATAAAATTATTTAATATAGAAATAGTAGA-----ATATAGACAAATTGT----AGAAAATGAGGTTGATGGT-GTCTGCAGTGAGGACATATTGCAGGAATAGTAAAGATTTC i colAng1.NW_012114488v1 C 0 C 0 s canFam3.chr1 56183476 126 + 122678785 ---AGACAGGATGGTGGCCCAAAGCACATGTGGTT-CCCAACACAAGAAAGGGAGA-----AAGTGGACAGGTTCT----AGAAAATGAGGCTTATGGCGGTCTGTAATCATGATATACTGGGGGGTTGGAAAGAATTC- i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 582924 139 + 760995 AGAGTGCAGAATGATGGTCTAAAGCAAGCCAAATTATTTAATACAGAAATGGTAGAAATGGATATTGACCAATTATGTAAGTAAAATGAAATTCATGGAAGTTTGTAATAATGGCATATTA-GGGGATTGTAAAGATTTT i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10958158 2272 - 12073884 I e saiBol1.JH378287 1305897 0 - 2905041 C e aotNan1.NW_018494782v1 1517135 606 - 1813869 I e cebCap1.NW_016107695v1 1268309 603 - 2164891 I e calJac3.chr4 169902286 5 + 171630274 I a score=411795.000000 s hg38.chr6_KB021644v2_alt 116559 60 + 185823 CAGAAGAAGAATTCCAAGTTTCCAATAAGAAACTTATTAGCCCATCTATAACAATCAAAT s panTro5.chr6 173572681 60 + 175400573 CAGAAGAAGAATTCCAAGTTTCCAATAAGAAACTTATTAGCCCATCTATAACAATCAAAT i panTro5.chr6 I 292 C 0 s panPan2.chr6 171806501 60 + 173848474 CAGAAGAAGAATTCCAAGTTTCCAATAAGAAACTTATTAGCCCATCTATAACAATCAAAT i panPan2.chr6 I 292 C 0 s gorGor5.CYUI01015032v1 11489145 60 - 12463322 CAGAAGAAGAATTCCAACTTTCCAATAAGAAACTTATTAGCCCATCTATAACAATCAAAT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156314028 57 + 157873769 ---TAGAAGAACTCCAAGTATCCAATGAGAAACTCATTGGCCCATCTATAACAATCAAAT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170343455 60 + 172585720 TAGAAGGACAATTCCAAGTATCCAATAAGAAACTTATTGGTCCATCTATAACAATCAAAT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169088839 60 - 170955103 TAGAAGGACAATTCCAAGTATCCAATAAGAAACTTATTGGTCCATCTATAACAATCAAAT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8375385 60 + 10161646 TAGAAGGACAATTCCAAGTATCCAATAAGAAACTTATTGGTCCATCTATAACAATCAAAT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1407112 60 + 3144229 TAGAAGAAGAATTCCAAGTTTCCAATAAGAAACTTATTGGCCCATCTATAACAATCAAAT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96693657 60 + 98384682 TGGAAGAACAATTCCAAGTATCCAATAAGAAACTTATTGGCCCATCTATAACAATCAAAT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8229361 60 - 10857215 TAGAAGAACAATTCCAAGTTTCCAATAAGAAACTTATTGGCCCATCTATAACAATCAAAT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15621170 60 - 23502949 TAGAAGAAGACTTCCAAGTTTCCAATAAGAAACTTATTGGCCCATCTATAACAATCAAAT i colAng1.NW_012114488v1 C 0 C 0 s canFam3.chr1 56183602 60 + 122678785 TAGAAGAATAAAGCCAGGTATCCAATAAGAAATTTATTGCTCCATGGATAGCAATCACAT i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 583063 60 + 760995 TAAAAGAAAAATTTCAAGTATTCAATAAGAAATTTATTGGCCTGTGGATAGCAATCAAAC i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10958158 2272 - 12073884 I e saiBol1.JH378287 1305897 0 - 2905041 C e aotNan1.NW_018494782v1 1517135 606 - 1813869 I e cebCap1.NW_016107695v1 1268309 603 - 2164891 I e calJac3.chr4 169902286 5 + 171630274 I a score=1553629.000000 s hg38.chr6_KB021644v2_alt 116619 264 + 185823 ACTTCAGTTTTAATTGT-AAAAATATTCACGATGTTGTAATAATGCTTTATTTCATGTAAACATGCAAG-AAAAAATCTTTTGTAGGAGCCATGAGTTCT--------ATGTAGCAAAATGTACTGTGAGTCTAATAGGTACAAGCCTAGGCTCCAATGAAAAGTATTTATCACGCTCCTAAAACAA-TTGATGTTTCCCAGAACATAAACCAT-AAACTCCACA-TTTTT--ATTTTATCATGGCACAGTGGA-----AAAGGGGGTGGCATATTCCAAATAC s panTro5.chr6 173572741 264 + 175400573 ACTTCAGTTTTAATTGT-AAAAATATTCACGATGTTGTAATAATGCTTTATTTCATGTAAACATGCAAG-AAAAAATCTTTTGTAGGAGCCATGAGTTCT--------ATGTAGCAAAATGTACTGTGAGTCTAATAGGTACAAGCCTAGGCTCCAATGAAAAGTATTTATCACGCTCCTAAAACAA-TTGATGTTTCCCAGAACATAAACCAT-AAACTCCACA-TTTTT--ATTTTATCATGGCACAGTGGA-----AAAGGGGGTGGCATATTCCAAATAC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171806561 264 + 173848474 ACTTCAGTTTTAATTGT-AAAAATATTCACAATGTTGTAATAATGCTTTATTTCATGTAAACATGCAAG-AAAAAATCTTTTGTAGGAGCCATGAGTTCT--------ATGTAGCAAAATGTACTGTGAGTCTAATAGGTACAAGCCTAGGCTCCAATGAAAAGTATTTATCACGCTCCTAAAACAA-TTGATGTTTCCCAGAACATAAACCAT-AAACTCCACA-TTTTT--ATTTTATCATGGTACAGTGGA-----AAAGGGGGTGGCATATTCCAAATAC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11489205 265 - 12463322 ACTTCAGTTTTAATTGT-AAAAATAGTCACGATGTTGTAATGATGCTTTATTTCATGTAAACATGCAAGAAAAAAAACTTTTGTAGGAGCCATGAGTTTT--------ATGTAGCAAAATGTACTGTGAGTCTAATAGGTACAAGCCTAGGCTCCAATGAAAAGTATTTATAACGCTCCTAAAACAA-TTGATGTTTCCCAGAACATAAACCAT-AAACTCCACA-TTTTT--ATTTTATCATGGCACAGTGGA-----AAAGGGGGTGGCATATTCCAAATAC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156314085 265 + 157873769 ACTTCAGTTTTAATTGTAAAAAATATTCACGATGTTGTGATAATGCTTTATTTCATGTAAACATGCAAG-AAAAAACCCTTTGTAGGAGCCATGAGTTTT--------CTGTAGCAAAACGTACTGTGAGTCCGATAGGCACAAGCCTAGTCTCCAATGAAAAGTATTTATCATGCTCCTAAAACGA-TTGATGTTTCCCAGAACATAAACCAT-AAAGTCCACA-TTTTT--ATTTTATCATGGCACAGTGGA-----AAAGGGGGTGGCATATTCCTAATAC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170343515 264 + 172585720 ACTTCAGTTTTAATTGT-AAAAAAATTCACGATGTTGTAATAATGCTTTATTTCATGTAAACATGCAAG-AAAAAACCTTTTGTAGGAGTCCAGAGTTTT--------ATGTAGCAAAATGTTCTAAGAGTCTGATAGGAACAAACCTAGGCTCCAATGAAAAGTATTTATCATGCTCCTAAAGCAA-TCAACATTTCCCAGAACATAAACCAT-GAGCTCCGCA-TTTTT--ATTTTATCATGGCACAGTGGA-----AAAGGGGGTGGCATATTCCAAATAC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169088899 264 - 170955103 ACTTCAGTTTTAATTGT-AAAAAAATTCACGATGTTGTAATAATGCTTTATTTCATGTAAACATGCAAG-AAAAAACCTTTTGTAGGAGTCCAGAGTTTT--------ATGTAGCAAAATGTTCTAAGAGTCTGATAGGAACAAACCTAGGCTCCAATGAAAAGTATTTATCATGCTCCTAAAACAA-TCAATATTTCCCAGAACATAAACCAT-GAGCTCCGCA-TTTTT--ATTTTATCATGGCACAGTGGA-----AAAGGGGGTGGCATATTCCAAATAC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8375445 264 + 10161646 ACTTCAGTTTTAATTGT-GAAAAAATTCACGATGTTGTAATAATGCTTTATTTCATGTAAACATGCAAG-AAAAAACCTTTTGTAGGAGTCCAGAGTTTT--------ATGTAGCAAAATGTTCTAAGAGTCTGATAGGAACAAACCTAGGCTCCAATGAAAAGTATTTATCATGCTCCTAAAACAA-TCAATATTTCCCAGAACATAAACCAT-GAGCTCCGCA-TTTTT--ATTTTATCATGGCACAGTGGA-----AAAGGGGGTGGCATATTCCAAATAC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1407172 264 + 3144229 ACTTCAGTTTTAATTGT-AAAAAAATTCACGATGTTGTAATAATGCTTTATTTCATGTAAACATGCAAG-AAAAAACCTTTTGTAGGAGTCCAGAGTTTT--------ATGTAGCAAAATGTTCTAAGAGTCTGATAGGAACAAACCTAGGCTCCAATGAAAAGTATTTATCATGCTCCTAAAACAA-TCAATATTTCCCAGAACATAAACCAT-AAGCTCTGCA-TTTTT--ATTTTATCATGGCACAGTGGA-----AAAGGGGGTGGCATATTCCAAATAC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96693717 265 + 98384682 ACTTCAGTTTTAATTGT-AAAAAAATTTACGATGTTGTAATAATGCTTTATTTCATGTAAACATGCAAG-AAAAAACCTTTTGTAGGAGTCCAGAGTTTT--------ATGTAGCAAAATGTTCTAAGAGTCTGATAGGAACAAACCTGAGCTCCAATGAAAAGTATTTATCATGCTCCTAAAACAA-TCAATATTTCCCAGAACATAAACCAT-GAGCTCCGCATTTTTT--TTTTTATCATGGCACAGTGGA-----AAAGGGGGTGGCATATTCCAAATAC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8229421 265 - 10857215 ACTTCAGTTTTAATTGTAAAAAAAATTCACGATGTTGTAATAATGCTTTATTTCATGTAAACATGCAAG-AAAAAACCTTTTGTAGGAGTCCAGAGTTTT--------ATGTAGCAAAATGTTCTAAGAGTCTGATAGGAACAAACCTAGGCTCCAATGAAAAGCATTTATCATGCTCCTAAAACAA-TCAATATTTCCCAGAACATAAACCAT-GAGCTCCGCA-TTTTT--ATTTTATCATGGCACAGTGGA-----AAAGGGGGTGGCATATTCCAAATAC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15621230 264 - 23502949 ACTTCAGTTTTAATTGT-AAAAAAATTCACGATGTTGTAATAATGCTTTATTTCATGTAAACATGCAAG-GAAAAACCTTGTGTAGGAGTCCAGAGTTTT--------ATGTAGCAAAATGTTCTATGAGTCTGATAGGAACAAGCCTAGGCTCCAATGAAAAGTATTTATCATGCTCCTAAAACAA-TCAATATTTCCCAGAACATAAACCAT-AAGCTCCGCA-TTTTT--ATTTTATCATGGCACAGTGGA-----AACGGGGGTGGCATATTCCAAATAC i colAng1.NW_012114488v1 C 0 C 0 s dasNov3.JH569188 583123 256 + 760995 ACTTCAGTTTTAATTGTAAAAAATATACATGATGTGGCAATA---CTTTA--------------------TGAAAATCTCTCATCTGAGGCAAGGGTTTTATACATACATATATCAAAAAGTTTTCTGGGTCTAACAGAAGAAAGCCTACTCTCTCTCT----TTTTTTCTCAACTTCCTAGACAAATTCAACATTTCCCACAACATAAATCATAAAACTCTGCA-TTTTTTAATTTTAGCATAGCATGGTGGAGGTGGATATGGGAGAGCATATTCTTAATAT i dasNov3.JH569188 C 0 I 1 e otoGar3.GL873575 10958158 2272 - 12073884 I e saiBol1.JH378287 1305897 0 - 2905041 C e aotNan1.NW_018494782v1 1517135 606 - 1813869 I e cebCap1.NW_016107695v1 1268309 603 - 2164891 I e calJac3.chr4 169902286 5 + 171630274 I e canFam3.chr1 56183662 0 + 122678785 C a score=1379052.000000 s hg38.chr6_KB021644v2_alt 116883 234 + 185823 AATCTATCAAAGTTTTCCTTATTTTGTCCCATACTTACTC-TGTTTTCATGTTAAGCCTGTG-------GAACTGTTTCCCTAGCTTTAAGAACA-TGGCAACAAAAGACGCAGGAATCAGAGGATTCTGCCCCATAACTGAAGTATGCCCTTGGCTGTGCTGCCAGGTTAAATCCACCTCACAGCATCCGGCCTCCTGTTGGGTGGACATCCACGCTTCCCCTTTTCACTATCCCGACCCCA--------- s panTro5.chr6 173573005 234 + 175400573 AATCTATCAAAGTTTTCCTTATTTTGTCCCATACTTACTC-TGTTTTCATGTTAAGCCTGTC-------GAACTGTTTCCCTAGCTTTAAGAACA-TGGCAACAAAAGACGCAGGAATCAGAGGATTCTGCCCCATAACTGAAGTATGCCCTTGGCTGTGCTGCCAGGTTAAATCCACCTCACAGCATCCGGCCTCCTGTTGGGTGGACATCCACGCTTCCCCTTTTCACTATCCCGACCCCA--------- i panTro5.chr6 C 0 C 0 s panPan2.chr6 171806825 234 + 173848474 AATCTATCAAAGTTTTCCTTATTTTGTCCCATACTTACTC-TGTTTTCATGTTAAGCCTGTC-------GAACTGTTTCCCTAGCTTTAAGAACA-TGGCAACAAAAGACGCAGGAATCAGAGGATTCTGCCCCATAACTGAAGTATGCCCTTGGCTGTGCTGCCAGGTTAAATCCACCTCACAGCATCCGGCCTCCTGTTGGGTGGACATCCACGCTTCCCCTTTTCACTATCCCGACCCCA--------- i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11489470 234 - 12463322 GATCTATCAAAGTTTTCCTTATTTTGTCCCATACTTACTC-TTTTTTCATGTTAAGCCTGTC-------GAACTGTTTCCCTAGCTTTAAGAACA-TGGCAACAAAAGACGCAGGAATCAGAGGATTCTGCCCCATAACTGAAGTATGCCCTTGGCTGTGCAGCCAGGTTAAATCCACCTCACAGCATCCGGCCTCCCGTTGGGTGGACATCCAGGCTTCCCATTTTCACTATCCCGACCCCA--------- i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156314350 233 + 157873769 AATCTAT-AAAGTTTTCCTTATTTTGTCCCATACTTACTC-TTTTTTCATGTTAAGCCTGTC-------AAACTGTTTCCCTAGCTTTGAGAACA-TGGCAACAAAAGACACAGGAATCAGAGGATTCTGCCCCATAACTGAAGTATGCCCTTGGCTGTGCAGCAAGGTTAAGTCCATCTCACAGTACCCGGCCTCCTTTTGGGTGGACATCCATGCTTCCCCTTTTCACTATCCCGACCCCA--------- i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170343779 242 + 172585720 AATCTATCAAAGTTTTCCTTATTTTGTCCCATATTTACTCTTTTTTTCTTGTAAAGCCTGTCAAGGCTTGAACTGTTTCCCTAGCTTTAAAAACA-TGGCAATAAAAGACGCAGGAATCAGAGGATTCTGCCCCATGACTGAAGTATGCTCTTGGCTGTGCAGCCAGGTTAAATCCATCTCACAGTGCCCGGCATCCTGCTGGGTGGACATCCACGCTTCCCCTTTTCACTGTCCCGACCCCA--------- i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169089163 242 - 170955103 AATCTATCAAAGTTTTCCTTATTTTGTCCCATATTTACTCTTTTTTTCTTGTAAAGCCTGTCAAGGCTTGAACTGTTTCCCTAGCTTTAAGAACA-TGGCAATAAAAGACGCAGGAATCAGAGGATTCTGCCCCATGACTGAAGTATGCTCTTGGCTGTGCAGCCAGGTTAAATCCATCTCACAGTGCCCGGCATCCTGCTGGGTGGACATCCACGCTTCCCCTTTTCACTGTCCCGACCCCA--------- i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8375709 242 + 10161646 AATCTATCAAAGTTTTCCTTATTTTGTCCCATATTTACTCTTTTTTTCTTGTAAAGCCTGTCAAGGCTTGAACTGTTTCCCTAGCTTTAAGAACA-TGGCAATAAAAGACGCAGGAATCAGAGGATTCTGCCCCATGACTGAAGTATGCTCTTGGCTGTGCAGCCAGGTTAAATCCATCTCACAGTGCCCGGCATCCTGCTGGGTGGACATCCACGCTTCCCCTTTTCACTGTCCCGACCCCA--------- i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1407436 242 + 3144229 AATCTATCAAAGTGTTCCTTATTTTGTCCCATATTTACTCTTTTTTTCATGTAAAGCCTGTCAAGGCTTGAACTGTTTCCCTAGCTTTAAGAACA-TGGCAATAAAAGTCGCAGGAATCAGAGGATTCTGCCCCATGACTGAAGTATGCTCTTGGCTGTGCAGCCAGGTTAAATCCATCTCACAGCACCCGGCATCCTGCTGGGTGGACATCCACACTTCCCCTTTTCACTATCCCGACCCCA--------- i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96693982 242 + 98384682 AATTTATCAAAGTGTTCCTTATTTTGTCCCATATTTGCTCTTTTTTTCATGTAAAGCCTGTCAAGGCTTGAACTGTTTCCCTAGTTTTAAGAACA-TGGCAATAAAAGACGCAGGAATCAGAGGATTCTGCCCCATGACTGAAGTATGCTCTTGGCTGTGCAGCCAGGTTAAATCCATCTCACACCGCCCGGCATCCTGTTGGGTGGACATCCACACTTCCCCTTTTCACTGTCCCAACCCCA--------- i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8229686 241 - 10857215 AACCTATCAAAGTGTTCCTTATTTTGTCCCATATTTGCTC-TTTTTTCATGTGAAACCTGTCAAGGCTGGAACTGTTTCCCTAGCTTTAAGAACA-TGGCAATAAAAGTCGCAGGAATCAGAGGATTCTGCCCCATGACTGAAGTATGCTCTTGGCTGTGCAGCCAGGTTAAATCCATCTCACAGCACCCGGCATCCTGCTGGGTGGACATCCACACTTCCCCTTTTCACTATCCCGACCCCA--------- i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15621494 241 - 23502949 AATCTATC-AAGTTTTCCTTATTTTGTCCCATATTTACTCTGTTTTTCATGTGAAGCCTGTCAAGGCTCGAACTGCTTCCCTAGCTTTAAGAACA-TGGCAATAAAAGACGCAGGAATCAGAGGATTCTGTCCCATGACTGAAGTATGCTCTTAGCTGTGCAGCCAGGTTAAATCCACCTCACAGCACCCGGCGCCCTGTTGGGTGGACATCCACACTTCCCCTTTTCACTATTCTGACCCCA--------- i colAng1.NW_012114488v1 C 0 C 0 s canFam3.chr1 56183662 226 + 122678785 AGCCCACCGAACTCCTCCTGGTTCTG-CCCACGCAGACTCGCTGTCTGGCGTTGAGTCTGCCCTGAGTGAGGCCTGTTCAGTGATGGTGAGAACATTGGCCGTCGAGGGCGCAGGGCTCCGTGGATTGGGCCCCAGGACCAAG----ACCGACAGCTGAGCTGCTGGACTGAAT--GATCCAGAGTGTCCTGTGCAGCACAGGGCAG-------CACCTGTTCCCATCACCAGC---ACCCCC--------- i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 583380 239 + 760995 AACCCATCAAATTTCTCCTGATTTTGTCCCATATCTACTC-TTCTTTAGTCTTAAGCTTATTTGACCACAAATGATTTCAACGATTATAAAAACA-AGGCAATAAAGGAGAGGGGAGTTAGTGCATTTTGCTTCACGATGAAAAAGTACCTGTGGTTGTGGACCCAGATTAAAT---AGTCACAA-----AGCAAAGTTTTGGGTATATATCAGTTCTTTCTCTTTTC---TTCTCTACCCCCTACCTCCCA i dasNov3.JH569188 I 1 C 0 e otoGar3.GL873575 10958158 2272 - 12073884 I e saiBol1.JH378287 1305897 0 - 2905041 C e aotNan1.NW_018494782v1 1517135 606 - 1813869 I e cebCap1.NW_016107695v1 1268309 603 - 2164891 I e calJac3.chr4 169902286 5 + 171630274 I a score=298026.000000 s hg38.chr6_KB021644v2_alt 117117 57 + 185823 CCCTAAATACTTGTTTTCGGAGTTGGCCGTGTCAAGCCTTGACTTACACTAGAAGGG s panTro5.chr6 173573239 57 + 175400573 CCCTAAATACTTGTTTTCGGAGTTGGCCGTGTCAAGCCTTGACTTACACTAGAAGGG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171807059 57 + 173848474 CCCTAAATACTTGTTTTCGGAGTTGGCCGTGTCAAGCCTTGACTTACACTAGAAGGG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11489704 57 - 12463322 CCCTAAATACTTATTTTTGGAGTTGGCCGTGTCAAGCCTTGACTTACACTAGAAGGG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156314583 57 + 157873769 CCCTAAATACTTGGTTTCGGAGTTGGCCGGGTCAAGCCTTGACTTACGCTAGAAGGG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170344021 57 + 172585720 CCCTAAGTACTTGGTTTCGGAGTTGACCGTGTCAAGCCTTGACTTGCACTAGAAGGG i rheMac8.chr4 C 0 I 6 s macFas5.chr4 169089405 57 - 170955103 CCCTAAGTACTTGGTTTCGGAGTTGACCGTGTCAAGCCTTGACTTGCACTAGAAGGG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8375951 57 + 10161646 CCCTAAGTACTTGGTTTCGGAGTTGACCGTGTCAAGCCTTGACTTGCACTAGAAGGG i macNem1.NW_012011000v1 C 0 I 6 s cerAty1.NW_012002071v1 1407678 57 + 3144229 CCCTAAGTACTTGGTTTTGGAGTTGACCGTGTCAAGCCTTAACTTACACTAGAAGGG i cerAty1.NW_012002071v1 C 0 I 6 s chlSab2.chr13 96694224 57 + 98384682 CCCTAAGTACTTGGTTTCGGAGTTGACCGCGTCAAGCCATGACTTGCACTAGAAGGG i chlSab2.chr13 C 0 I 6 s colAng1.NW_012114488v1 15621735 57 - 23502949 CCCTAAGTAACTGGTTTTGGAGTTGACCGTGTCAAGCCTTGACTTACACTAGAAGGG i colAng1.NW_012114488v1 C 0 I 6 s canFam3.chr1 56183888 56 + 122678785 TGCCAAATACCTGATTCTGGGGGAGGCAATGTC-AGACGGGACTTACACAGGAGGTA i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 583619 55 + 760995 CCCTAAATGCCTGATCCTGGGGTAGACAATG-CGAGAGTTGACTTGCACTGAAGTA- i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10958158 2272 - 12073884 I e saiBol1.JH378287 1305897 0 - 2905041 C e aotNan1.NW_018494782v1 1517135 606 - 1813869 I e cebCap1.NW_016107695v1 1268309 603 - 2164891 I e calJac3.chr4 169902286 5 + 171630274 I e manLeu1.NW_012106474v1 8229927 0 - 10857215 C a score=9648.000000 s hg38.chr6_KB021644v2_alt 117174 6 + 185823 TTACTC s panTro5.chr6 173573296 6 + 175400573 TTACTC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171807116 6 + 173848474 TTACTC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11489761 6 - 12463322 TTACTC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156314640 6 + 157873769 ACACTC i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169089462 6 - 170955103 ACACTC i macFas5.chr4 C 0 T 63 s canFam3.chr1 56183944 6 + 122678785 ATACTC i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 583674 6 + 760995 ACATTC i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10958158 2272 - 12073884 I e saiBol1.JH378287 1305897 0 - 2905041 C e aotNan1.NW_018494782v1 1517135 606 - 1813869 I e cebCap1.NW_016107695v1 1268309 603 - 2164891 I e calJac3.chr4 169902286 5 + 171630274 I e colAng1.NW_012114488v1 15621792 6 - 23502949 I e chlSab2.chr13 96694281 6 + 98384682 I e cerAty1.NW_012002071v1 1407735 6 + 3144229 I e manLeu1.NW_012106474v1 8229927 0 - 10857215 C e macNem1.NW_012011000v1 8376008 6 + 10161646 I e rheMac8.chr4 170344078 6 + 172585720 I a score=1911.000000 s hg38.chr6_KB021644v2_alt 117180 1 + 185823 T s panTro5.chr6 173573302 1 + 175400573 T i panTro5.chr6 C 0 C 0 s panPan2.chr6 171807122 1 + 173848474 T i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11489767 1 - 12463322 T i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156314646 1 + 157873769 T i nomLeu3.chr3 C 0 C 0 s canFam3.chr1 56183950 1 + 122678785 T i canFam3.chr1 C 0 I 60 s dasNov3.JH569188 583680 1 + 760995 T i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10958158 2272 - 12073884 I e saiBol1.JH378287 1305897 0 - 2905041 C e aotNan1.NW_018494782v1 1517135 606 - 1813869 I e cebCap1.NW_016107695v1 1268309 603 - 2164891 I e calJac3.chr4 169902286 5 + 171630274 I e colAng1.NW_012114488v1 15621792 6 - 23502949 I e chlSab2.chr13 96694281 6 + 98384682 I e cerAty1.NW_012002071v1 1407735 6 + 3144229 I e manLeu1.NW_012106474v1 8229927 0 - 10857215 C e macNem1.NW_012011000v1 8376008 6 + 10161646 I e rheMac8.chr4 170344078 6 + 172585720 I e macFas5.chr4 169089468 63 - 170955103 T a score=41175.000000 s hg38.chr6_KB021644v2_alt 117181 61 + 185823 TCCCTAAATACTTCATTTCGGGTTTGGCCGTGTCAA-----GACTTACGCTAGACGGGATGCTCTT s panTro5.chr6 173573303 61 + 175400573 TCCCTAAATACTTCATTTCGGGTTTGGCCGTGTCAA-----GACTTACGCTAGACGGGATGCTCTT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171807123 61 + 173848474 TCCCTAAATACTTCATTTCGTGTTTGGCCGTGTCAA-----GACTTACGCTAGACGGGATGCTCTT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11489768 61 - 12463322 TCCCTAAATACTTCATTTCGGGGTTGGCCGTGTCAA-----GACTTACGCTAGACGGGATGCTCTT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156314647 66 + 157873769 TCCCTAAATACTTGGTTTCGGAGTTGGCCGGGTCAAGCCTTGACTTACGCTAGACGAGACACTCTT i nomLeu3.chr3 C 0 C 0 s dasNov3.JH569188 583681 11 + 760995 -------------------------------------------CTTTTGTTAGA------------ i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10958158 2272 - 12073884 I e saiBol1.JH378287 1305897 0 - 2905041 C e aotNan1.NW_018494782v1 1517135 606 - 1813869 I e cebCap1.NW_016107695v1 1268309 603 - 2164891 I e calJac3.chr4 169902286 5 + 171630274 I e colAng1.NW_012114488v1 15621792 6 - 23502949 I e canFam3.chr1 56183951 60 + 122678785 I e chlSab2.chr13 96694281 6 + 98384682 I e cerAty1.NW_012002071v1 1407735 6 + 3144229 I e manLeu1.NW_012106474v1 8229927 0 - 10857215 C e macNem1.NW_012011000v1 8376008 6 + 10161646 I e rheMac8.chr4 170344078 6 + 172585720 I e macFas5.chr4 169089468 63 - 170955103 T a score=113052.000000 s hg38.chr6_KB021644v2_alt 117242 63 + 185823 CCCTAAATACTTGGTTTCGGAGTTGGCCATGTCAAGCCTTGACTTACACTAGAAGGGTTACTC s panTro5.chr6 173573364 63 + 175400573 CCCTAAATACTTGGTTTCGGAGTTGGCCATGTCAAGCCTTGACTTACACTAGAAGGGTTACTC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171807184 63 + 173848474 CCCTAAATACTTGGTTTCGGAGTTGGCCATGTCAAGCCTTGACTTACACTAGAAGGGTTACTC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11489829 63 - 12463322 CCCTAAATACTTGGTTTCGGAGTTGGCCGTGTCAAGCCTTGACTTACACTAGAAGGGTTACTC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156314713 63 + 157873769 CCCTAAATACTTGGTTTCGGAGTTGGCCGGGTCAAGCCTTGACTTACGCTAGAAGGGACACTC i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169089405 63 - 170955103 CCCTAAGTACTTGGTTTCGGAGTTGACCGTGTCAAGCCTTGACTTGCACTAGAAGGGACACTC i macFas5.chr4 T 63 C 0 s manLeu1.NW_012106474v1 8229927 63 - 10857215 CCCTAAGTACTTGGTTTTGGAGTTGACCTTGTCAAGCCTTGACTTACGCTAGAAGGGACACTC i manLeu1.NW_012106474v1 C 0 C 0 e otoGar3.GL873575 10958158 2272 - 12073884 I e saiBol1.JH378287 1305897 0 - 2905041 C e aotNan1.NW_018494782v1 1517135 606 - 1813869 I e cebCap1.NW_016107695v1 1268309 603 - 2164891 I e calJac3.chr4 169902286 5 + 171630274 I e dasNov3.JH569188 583692 0 + 760995 C e colAng1.NW_012114488v1 15621792 6 - 23502949 I e canFam3.chr1 56183951 60 + 122678785 I e chlSab2.chr13 96694281 6 + 98384682 I e cerAty1.NW_012002071v1 1407735 6 + 3144229 I e macNem1.NW_012011000v1 8376008 6 + 10161646 I e rheMac8.chr4 170344078 6 + 172585720 I a score=3822.000000 s hg38.chr6_KB021644v2_alt 117305 2 + 185823 TT s panTro5.chr6 173573427 2 + 175400573 TT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171807247 2 + 173848474 TT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11489892 2 - 12463322 TT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156314776 2 + 157873769 TT i nomLeu3.chr3 C 0 C 0 s manLeu1.NW_012106474v1 8229990 2 - 10857215 TT i manLeu1.NW_012106474v1 C 0 C 0 s dasNov3.JH569188 583692 2 + 760995 TT i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10958158 2272 - 12073884 I e saiBol1.JH378287 1305897 0 - 2905041 C e aotNan1.NW_018494782v1 1517135 606 - 1813869 I e cebCap1.NW_016107695v1 1268309 603 - 2164891 I e calJac3.chr4 169902286 5 + 171630274 I e colAng1.NW_012114488v1 15621792 6 - 23502949 I e canFam3.chr1 56183951 60 + 122678785 I e chlSab2.chr13 96694281 6 + 98384682 I e cerAty1.NW_012002071v1 1407735 6 + 3144229 I e macNem1.NW_012011000v1 8376008 6 + 10161646 I e rheMac8.chr4 170344078 6 + 172585720 I e macFas5.chr4 169089468 0 - 170955103 C a score=3782.000000 s hg38.chr6_KB021644v2_alt 117307 1 + 185823 C s panTro5.chr6 173573429 1 + 175400573 C i panTro5.chr6 C 0 C 0 s panPan2.chr6 171807249 1 + 173848474 C i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11489894 1 - 12463322 C i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156314778 1 + 157873769 C i nomLeu3.chr3 C 0 I 5603 s rheMac8.chr4 170344084 1 + 172585720 C i rheMac8.chr4 I 6 C 0 s macFas5.chr4 169089468 1 - 170955103 C i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8376014 1 + 10161646 C i macNem1.NW_012011000v1 I 6 C 0 s cerAty1.NW_012002071v1 1407741 1 + 3144229 C i cerAty1.NW_012002071v1 I 6 C 0 s chlSab2.chr13 96694287 1 + 98384682 A i chlSab2.chr13 I 6 C 0 s manLeu1.NW_012106474v1 8229992 1 - 10857215 C i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15621798 1 - 23502949 C i colAng1.NW_012114488v1 I 6 C 0 s dasNov3.JH569188 583694 1 + 760995 T i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10958158 2272 - 12073884 I e saiBol1.JH378287 1305897 0 - 2905041 C e aotNan1.NW_018494782v1 1517135 606 - 1813869 I e cebCap1.NW_016107695v1 1268309 603 - 2164891 I e calJac3.chr4 169902286 5 + 171630274 I e canFam3.chr1 56183951 60 + 122678785 I a score=261497.000000 s hg38.chr6_KB021644v2_alt 117308 56 + 185823 TATTGCACTCGTAGGGCAGAGAG-CAGCCTATATAGACTTTGGG-TTTTTTT--AAAGGT s panTro5.chr6 173573430 58 + 175400573 TATTGCACTCGTAGGGCAGAGAG-CAGCCTATGTAGACTTTGGT-TTTTTTTTTAAAGGT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171807250 56 + 173848474 TATTGCACTCGTAGGGCAGAGAG-CAGCCTATGTAGACTTTGGT-TTTTTTT--AAAGGT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11489895 56 - 12463322 TATTGCACTCATAGGGCAGAGAG-CAGCCTATGTAGACTTTGGG-TTTTTTT--AAAGGT i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170344085 56 + 172585720 TATTGCACTCACAGGGCACAGAG-CAGCCTATGTAGAGTTTGGA-TTTTTTT--AAAGAT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169089469 56 - 170955103 TATTGCACTCATAGGGCACAGAG-CAGCCTATGTAGAGTTTGGA-TTTTTTT--AAAGAT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8376015 56 + 10161646 TATTGCACTCATAGGGCACAGAG-CAGCCTATGTAGAGTTTGGA-TTTTTTT--AAAGAT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1407742 56 + 3144229 TATTGCACTCATAGGGCACAGAG-CAGTCTATGTAGAGTTTGGA-TTTTTTT--AAAGGT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96694288 57 + 98384682 TATTGCACTTATAGGGCACAGAG-CAGCCTATGTAGAGTTTGGATTTTTTTT--AAAGGT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8229993 56 - 10857215 TATTGCACTCACAGGGCACAGAG-CAGTCTATGTAGAGTTTGGA-TTTTTTT--AAAGGT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15621799 58 - 23502949 TATTGCAATTGTAGGGCACAGAG-CAGCCTATGTAGAGTTTGGG-TTTTTTTTCAAAGGT i colAng1.NW_012114488v1 C 0 C 0 s dasNov3.JH569188 583695 47 + 760995 ---------TATTGGACACAGAGTCAGCCTGGGTATACTTT-GA-TTTTTTT--AAAGGT i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10958158 2272 - 12073884 I e saiBol1.JH378287 1305897 0 - 2905041 C e aotNan1.NW_018494782v1 1517135 606 - 1813869 I e cebCap1.NW_016107695v1 1268309 603 - 2164891 I e calJac3.chr4 169902286 5 + 171630274 I e canFam3.chr1 56183951 60 + 122678785 I e nomLeu3.chr3 156314779 5603 + 157873769 I a score=1883524.000000 s hg38.chr6_KB021644v2_alt 117364 382 + 185823 TTTGCTGCAGCACCTAACTTCGAAACTTTGCTT--AACTTTTGGAAGCACATGCAGTTCCTCAGAGAGATACTTAATGACTTCTAA---------AGTAGGTTGCCAATAAGGAAGAAAACCTTTAATCTATAAGGTGAAAAAGGGCCAACTGGGAGCTGGTGCTGTATCATGCCCCTGCTCTGAGATtctgggtctgttttctcatttgtcagatagagccacaggccaga-cagtgtatgtaaaagttcccttca-atctcaaataacagtgattctatgactcTAGGTTCATTTATTCTAAATCATTTCAAACTTGTTAGgagacggatttacagtgcagtccatgaagcttgaatgtga--------g-ctccctcagc----tgcc--gtctcttgcagggactc s panTro5.chr6 173573488 382 + 175400573 TTTGCTGCAGCACCTAACGTCGAAACTTTGCTT--AACTTTTGGAAGCACATGCAGTTCCTCAGATAGATACTTAATGACTTCTAA---------AGTAGGTTGCCAATAAGGAAGAAAACCTTTAATCTATAAGGTGAAAAAGGGCCAACTGGGAGCTGGTGCTGTATCATGCCCCTGCTCTGAGATtctgggtctgttttctcatttgtcagatagagcctcaggccaga-cagtgtatgtaaaagttcccttca-atctcaaataacagtgattctatgactcTAGGTTCATTTATTCTAAATCATTTCAAACTTGTCAGGAGACGGATTTACAGTGCAGTCCATGAAGCTTGAATGTGA--------G-CTCCCTCAGC----GGCC--GTCTCTTGCAGGGACTC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171807306 382 + 173848474 TTTGCTGCAGCACCTAACGTCGAAACTTTGCTT--AACTTTTGGAAGCACATGCAGTTCCTCAGATAGATACTTAATGACTTCTAA---------AGTAGGTTGCCAATAAGGAAGAAAACCTTTAATCTATAAGGTGAAAAAGGGCCAACTGGGAGCTGGTGCTGTATCATGCCCCTGCTCTGAGATtctgggtctgttttctcatttgtcagatagagcctcaggccaga-cagtgtatgtaaaagttcccttca-atctcaaataacagtgattctatgactcTAGGTTCATTTATTCTAAATCATTTCAAACTTGTCAGGAGACGGATTTACAGTGCAGTCCATGAAGCTTGAATGTGA--------G-CTCCCTCAGC----GGCC--GTCTCTTGCAGGGACTC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11489951 381 - 12463322 TTTGCTGCAGCACCTAAC-TCGAAACTTTGCTT--AACTTTTGGAAGCACATGCAGTTCCTCAGATAGATACTTAATGACTTCTAA---------AGTAGGTTGCCAATAAGGAAGAAAACCTTTAATCTATAAGGTGAAAAAGGGCCAACTGGGAGCTGGTGCTGTATCATGCCCCTGCTCTGAGATtctgggtctgttttctcatttgtcagatagagcctcaggccaga-cagtgtatgtaaaagttcccttca-atctcaaataacagtgattctatgactcTAGGTTCATTTATTCTAAATCATTTCAAACTTGTTAGGAGACGGATTTACAGTGCAGTCCATGAAGCTTGAATGTGA--------G-CTCCCTCAGC----GGCT--GTCTCTTGCAGGGACTC i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170344141 382 + 172585720 TTTGCTGCAGCACCTAACTTCGAACCTTGGCTT--AACCATTGGAAGCACATGCAGTTCCTCA-ATAGATACTTAATGGCTTCTAA---------AGTAGGTTGCCAGTAAGGGAGAAAAGCTTTCATCTATAACGTGAAAAAGGGCCGACTGGGATCTGGGGCTCCATCATCCCCCTGCTCTGAGATTCTAGGTCTGTTTTCTCTTTCGTCAGACAGAGGCTCAGGCCAGA-CAGTGTACATCAAAGTTCCCTTCACGTGTCAAATAACAGTGGTTCTGTGACTCTAGGTTCATCGATTCTAAATCATTTCAAATGTGTTCAGAGACAGATTTACAGCGCAGTCCACGAAGCTTGAATGTGA--------G-CTCCCTCGGT----GGCC--ATCTCTTGCAGGGACTC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169089525 382 - 170955103 TTTGCTGCAGCACCTAACTTCGAACCTTGGCTT--AACCATTGGAAGCACATGCAGTTCCTCA-ATAGATACTTAATGGCTTCTAA---------AGTAGGTTGCCAGTAAGGGAGAAAAGCTTTCATCTATAAGGTGAAAAAGGGCCAACTGGGATCTGGGGCTCCATCATCCCCCTGCTCTGAGATTCTAGGTCTGTTTTCTCTTTCGTCAGACAGAGGCTCAGGCCAGA-CAGTGTACATCAAAGTTCCCTTCACGTGTCAAATAACAGTGGTTCTGTGACTCTAGGTTCATCGATTCTAAATCATTTCAAATGTGTTCAGAGACAGATTTACAGCGCAGTCCACGAAGCTTGAATGTGA--------G-CTCCCTCGGT----GGCC--ATCTCTTGCAGGGACTC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8376071 382 + 10161646 TTTGCTGCAGCACCTAACTTCGAACCTTGGCTT--AACCATTGGAAGCACATGCAGTTCCTCA-ATAGATACTTAATGGCTTCTAA---------AGTAGGTTGCCAGTAAGGGAGAAAAGCTTTCATCTATAAGGTGAAAAAGGGCTGACTGGGATCTGGGGCTCCATCATCCCCCTGCTCTGAGATTCTAGGTCTGTTTTCTCTTTCGTCAGACAGAGGCTCAGGCCAGA-CAGTGTACATCAAAGTTCCCTTCACGTGTCAAATAACAGTGGTTCTGTGACTCTAGGTTCATCGATTCTAAATCATTTCAAATGTGTTCAGAGACAGATTTACAGTGCAGTCCACGAAGCTTGAATGTGA--------G-CTCCCTCGGC----GGCC--ATCTCTTGCAGGGACTC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1407798 382 + 3144229 TTTGCTGCAGCACCTAACTTCGAACCTTGGCTT--AACCGTTGGAAGCACATGCAGTTCCTCA-ATAGATACTTAATGACTTCTAA---------AGTAGGTTGCCAGTAAGGGAGAAAAGCTTTCATCTATAAGGTGAAAAAGGGCCGACTGGGAGCTGGGGCTCCATCATCCCTCTGCTCTGAGATTCTAGGTCTGTTTTCTCTTTTGTCAGACAGAGGCTCAGGCCAGA-AAGTGTACATAAAAGTTCCCTTCACGTGTCAAATAACAGTGGTTCTATGACTCTAGGTTCATTGATTCTAAATCATTTCAAATGTGTTCAGAGACGGATTTACAGCACAGTCCACGAAGCTTGAATGTGA--------G-CTCCCTCAGC----GGCC--GTCTCTTGCAGGGACTC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96694345 376 + 98384682 TTTACTGCAGCACCTAACTTAGAAACTTGGCTT--AACCTTTGGAAGCACATGCAGTTCCTC-------TACTTAATGACTTCTAA---------AGTAGGTTGCCAATAAGGGAGAGAAGCTTTCATCTATAAGGTGAAAAAGGGCCGACTGGGAGCTGGGGCTCCATCATCCCCCTGCTCTGAGATTCTAGGTCTGTTTTCTCTTTTGTGAGACAGAGGCTCAGGCCAGA-CAGTGTACATAAAAGTTCCCTTCACATGTCAAATAACAGTGGTTCTATGACTCTAGGTTCATTGATTCTAAATCATTTCAAATGTGTTCAGAGACGGATTTACAGCGCAGTCCACGAAGCTTGAATGTGA--------G-CTCCCTCGGC----GGCC--ATCTCTTGCAGGGACTC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8230049 382 - 10857215 TTTGCTGCAGCACCTAACTTCGAACCTTGGCTT--AACCGTTGGAAGCACGTGCAGTTCCTCA-ATAGATACTTAATGACTTCTAA---------AGTAGGTTGCCAGTAAGGGAGAAAAGCTTTCATCTATAAGGTGAAAAAGGGCCGACTGGGAGCTGGGGCTCCATTATCCCTCTGCTCTGAGATTCTAGGTCTGTTTTCCCTTTTGGCAGACAGAGGCTCAGGCCAGA-AAGTGTACATAAAAGTTCCCTTCACATGTCAAATAACAGTGGTTCTGTGACTCTAGGTTCATTGATTCTAAATCATTTCAAATGTGTTCAGAGACGGATTTACAGCACAGTCCACGAAGCTTGAATGTGA--------G-CTCCCTCAGC----GGCC--GTCTCTTGCAGGGACTC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15621857 382 - 23502949 TTTGCTGCAGCACCTAACTTCGAAACTTGGCTT--AACCTTTGGAAGCACATGCAGTTCCTCA-ATAGATACTTAATGACTTCTAA---------AGTAGGTTGCCAATAAGGGAGAAAACCTTTCAACTAGAAGGTGAAAAAGGGCCGACTGGAAGCTGGGGCTCCATCATCCCCCTCCTCCGAAATTCTGGGTCTGTTTTCTCTTTTGTCAGACAGAGGCTCAGGCCACA-CAGTGTACATAAAAGTTCCCTTCACATGTCAAATAACAGTGGCTGTATGACTCTAGGTTCATTTATTCTAAATCATTTCAAATGTGTTcagagacggatttacagtgcagtccacaaagcttgaatgtga--------g-ctccctcagc----ggcc--gtctcttgcagggactc i colAng1.NW_012114488v1 C 0 C 0 s canFam3.chr1 56184011 381 + 122678785 TTTGGCACAGGGTCTAACCTTAAAATTTGACTTGAAACTCTGATAATCACATGCACGTCATCAAGTAGATACCTACTGACttccagcacgtttccagcacgtt-ccagcaAGGA--AATACCTTTCATGCACGAGGTCAA----GGCCGAC-----------GCCCCACAATGCC-CGGCTCTGAGGTCGCTGGCCCATTTGCTCATTCAGCAAGTGGACACTTAGACCAGACCCGTGTACATCAG---TCCCCTCGGATCTGAAATGATCATGG-TCCACGACACTATGTTTGCTTCTCCGCAGTCACCTTGCACACATTTGGACACCAA-TAGCAGTGGGGCTGACG--GCTCAGCCGTGGCCCTAGCTG-CTCCCACGGCCAGGGTCC--ATGCTGTGGAAATGCCC i canFam3.chr1 I 60 C 0 s dasNov3.JH569188 583742 353 + 760995 TTTGCC-TAGTGCCAAACTTTA-------------AATTTTTGGAAGCACATTCAACTCATCCAGTGTATACTTATTGACTTCTAA---------AGTAAGTTTCCAATAAAGA--AAATGTCTTAATAGATGGTGTAAGATTCAGCAGGTTGGGGGCCGACACTCTATCATGGCCTGGCTCTGAGACAGTTGGTATATT---------------AAGAGATTTAAGCCAGG-TAATACATTTAAA--TCCCCTTTAAGTCTAAAATAA--ATGGTTCTATGATCCCAAGTTAATTCATTCTAAATCATGTCAAACATGTTcagaggtagatttaccatgaaactaatgaagtttaggcaaca--------gtttctcttatt----tgcatggtcttttccaagggctc i dasNov3.JH569188 C 0 I 682 e otoGar3.GL873575 10958158 2272 - 12073884 I e saiBol1.JH378287 1305897 0 - 2905041 C e aotNan1.NW_018494782v1 1517135 606 - 1813869 I e cebCap1.NW_016107695v1 1268309 603 - 2164891 I e calJac3.chr4 169902286 5 + 171630274 I e nomLeu3.chr3 156314779 5603 + 157873769 I a score=189826.000000 s hg38.chr6_KB021644v2_alt 117746 46 + 185823 aggag--------------ggaagctggacacatgtctgtctt--------------cacggagtctggacagc s panTro5.chr6 173573870 46 + 175400573 AGGAG--------------GGAAGCTGGACACATGTCTGTCTT--------------CACGGAGTCTGGACAGC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171807688 46 + 173848474 AGGAG--------------GGAAGCTGGACACATGTCTGTCTT--------------CACGGAGTCTGGACAGC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11490332 46 - 12463322 AGGAG--------------GGAAGCTGGACACATGTCTGTCTT--------------CACGGAGTCTGGACAGC i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170344523 44 + 172585720 AGGAG--------------GGAAGCTGGACATATGTCTGTCTT--------------CAC--AGTCTGGACAAC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169089907 44 - 170955103 AGGAG--------------GGAAGCTGGACATATGTCTGTCTT--------------CAC--AGTCTGGACAGC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8376453 44 + 10161646 AGGAG--------------GGAAGCTGGACATATGTCTGTCTT--------------CAC--AGTCTGGACAGC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1408180 44 + 3144229 AGGAG--------------GGAAGCTGGACATATGTCTGTCTT--------------CGT--AGTCTGGACAGC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96694721 44 + 98384682 AGGAG--------------GGAAGCTGGACATATGTCTGTCTT--------------CCC--AGTCTGGACAGC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8230431 44 - 10857215 AGGAG--------------GGAAGCTGGACATATGTCTGTCTT--------------CGT--AGTCTGGACAGC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15622239 46 - 23502949 gggag--------------ggaagctggacatatgtctgtctt--------------tgcagagtctggacagc i colAng1.NW_012114488v1 C 0 C 0 s canFam3.chr1 56184392 74 + 122678785 ATCAGCCATGTGTGTTTGTGGGACCTGCAGAGTTGGCTACCGCAGGTGCAGGCGAAGCAGGTGGTGCAGGCTGC i canFam3.chr1 C 0 C 0 e otoGar3.GL873575 10958158 2272 - 12073884 I e saiBol1.JH378287 1305897 0 - 2905041 C e aotNan1.NW_018494782v1 1517135 606 - 1813869 I e cebCap1.NW_016107695v1 1268309 603 - 2164891 I e calJac3.chr4 169902286 5 + 171630274 I e dasNov3.JH569188 584095 682 + 760995 I e nomLeu3.chr3 156314779 5603 + 157873769 I a score=320382.000000 s hg38.chr6_KB021644v2_alt 117792 62 + 185823 tctccatcccctccca----tgtcctctctgccgccattccc-tggtgtctggtggcatcgaaggga s panTro5.chr6 173573916 62 + 175400573 tctccatcccctccca----tgtcctctctgccgccattccc-tggtgtctggtggcatcgaaggga i panTro5.chr6 C 0 C 0 s panPan2.chr6 171807734 62 + 173848474 tctccatcccctccca----tgtcctctctgccgccattccc-tggtgtctggtggcatcgaaggga i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11490378 62 - 12463322 tctccatcccctccca----tgtcctctctgccgccattccc-tggtgtctggtggcatcgaaggga i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170344567 62 + 172585720 tctctgtcccatccca----tgtcctgtctgccgcccttccc-tggtgtctggtggcattgaaggga i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169089951 62 - 170955103 tctctgtctcatccca----tgtcctgtctgccgcccttccc-tggtgtctggtggcattgaaggga i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8376497 62 + 10161646 tctctgtcccatccca----tgtcctgtctgccgcccttccc-tggtgtctggtggcattgaaggga i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1408224 62 + 3144229 tctctgtcccatccta----tgtcctgtctgccgcccttccc-tggtgtctggtggcattgaaggga i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96694765 62 + 98384682 tctccgtcccatccca----tgtcctctctgccgcccttccc-tggtgtctggtggcattgaaggga i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8230475 62 - 10857215 tctccgtcccatccca----tgtcctctctgccacccttccc-tggtgtctggtggcattgaaggga i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15622285 62 - 23502949 tctctgtcccatccca----tgtcctgtctgccacccttccc-tggtgtctggtgggactgaaggga i colAng1.NW_012114488v1 C 0 C 0 s canFam3.chr1 56184466 42 + 122678785 TGTCTGTCTGCCCTCGTTCCTGTCATCTCTGCCGCCTGTCCC------------------------- i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 584777 63 + 760995 tctctttcctcttcag----ctccctctctatcacacttccctttgtgtctggtgacattggagaga i dasNov3.JH569188 I 682 C 0 e otoGar3.GL873575 10958158 2272 - 12073884 I e saiBol1.JH378287 1305897 0 - 2905041 C e aotNan1.NW_018494782v1 1517135 606 - 1813869 I e cebCap1.NW_016107695v1 1268309 603 - 2164891 I e calJac3.chr4 169902286 5 + 171630274 I e nomLeu3.chr3 156314779 5603 + 157873769 I a score=3666435.000000 s hg38.chr6_KB021644v2_alt 117854 604 + 185823 tcatgaggactttgagatc-caatttgaaaagagatgaactg-cagtaatttcactctggcatggtg---ggatccactcatg--gttcaccatcacgtctgtggatagttgaattactgctgatcttcccagtgtggaagtggcttcc-agaacattcacccaaccaccgtgtgtctcacccggcctgtgacaagaaggagcagggccagaggtcagttccgacgcagaagggtcctccagggccc--------agggggatggac-agccaggcagacacaaggctcaa--------aggcgccga-------ccccgaagctgctctgcaggaaattcttccaatctgtacaccc-taaattatatgcagg-ttcatcccc----accttatccaaacaaaagtcctcgtctgtcaagcatctcctgtcgagaatgcagtacatgcagcgataa--acac------atcacacacaggaaa------aggcatgtg------------------gcacaaacaca----atggcaattactt-----gtgcaaggtagaacttttcagaaccc--------cagcgtcggcagtg--ccgggcg--gggctggcagtcggaaaagcaag---ttctg--cggcg-gaccacg--------------ggtttaggctcaccgc--gcagtcccaatacaactctatttcctgcga s panTro5.chr6 173573978 604 + 175400573 tcatgaggactttgagatc-caatttgaaaagagatgaactg-cagtaatttcactctggcatggtg---ggatccactcatg--gttcaccatcacgtctgtggataattgaattactgctgatcttcccagtgtggaaatggcttcc-agaacattcacccaaccaccatgtgtctcacccggcctgtgacaagaaggagcagggccagaggtcagttccgacgcagaagggtcctccagggccc--------agggggatggat-agccaggcagacacaaggctcaa--------aggcgccga-------ccccgaagctgctctgcaggaaattctttcaatctgcacaccc-taaattatatgcagg-ttcatcccc----acctcatccaaacaaaagtcctcgtctgtcaagcatctcctgtcgagaatgcagtacatgcagcgataa--acac------atcacacacaggaaa------aggcatgtg------------------gcacaaacaca----atggcaattactt-----gtgcaaagtagaacttttcagaaccc--------cagcgtcggcaatg--ccgggcg--gggctggcagtcggaaaaggaag---ttctg--cggcg-gaccacg--------------ggtttaggctcaccgc--gcagtcccaatacaactctgtttcctgcga i panTro5.chr6 C 0 C 0 s panPan2.chr6 171807796 604 + 173848474 tcatgaggactttgagatc-caatttgaaaagagatgaactg-cagtaatttcactctggcatggtg---ggatccactcatg--gttcaccatcacgtctgtggatagttgaattactgctgatcttcccagtgtggaaatggcttcc-agaacattcacccaaccaccatgtgtctcacccggcctgtgacaagaaggagcagggccagaggtcagttccgacgcagaagggtcctccagggccc--------agggggatggat-agccaggcagacacaaggctcaa--------aggcgccga-------ccctgaagctgctctgcaggaaattctttcaatctgcacaccc-tgaattatatgcagg-ttcatcccc----acctcatccaaacaaaagtcctcgtctgtcaagcatctcctgtcgagaatgcagtacatgcagcgataa--acac------atcacacacaggaaa------aggcatgtg------------------gcacaaacaca----atggcaattactt-----gtgcaaagtagaacttgtcagaaccc--------cagcgttggcaatg--ccgggcg--gggctggcagtcggaaaaggaag---ttctg--cggcg-gaccacg--------------ggtttaggctcaccgc--gcagtcccaatacaactctgtttcctgcga i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11490440 607 - 12463322 tcatgaggactttgagatc-caatttgaaaagagatgaactg-cagtaatttcactgtggcatggtg---ggatccactcatg--gttcaccatcacgtctgtggatagttgaattactgctgatcttcccagtgtggaaatggcttcc-agaacattcacccaaccaccgtatgtctcacccggcctgtgacaagaaggagcagggccagaggtcagttccgacgcagaagggtcctccagggccc--------agggggatggac-agccaggcagacacaaggctcaa--------aggcgccga-------ccccgaagctgctctgcgggaaattcttccaatctgcacaccc-taaattatatgcagg-ttcatcctc----acctcatccaaacaaaagtcctcgtctgttaagcatctcctgtcgagaatgcagtacatgcagcaataa--acac------atcacacagaggaaa------aggcatatg------------------gcacaaacaca----atggcaattactt-----gtgcaaggtagaacttttcagaaccc--------cagcgtcggcaatg--ccgggcg--gggctggcagtcggaaaaggaagttcttctg--cggcg-gaccacg--------------ggtttaggctcaccgc--gcagtcccaatacaactctatttcctgcga i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170344629 607 + 172585720 tcatgaggactttgagatc-caatttgaaaagagatgaactg-caataatttcactctggcatggtg---ggatccactcgtg--gttcaccgtcacttctgtggatagttgaattactgctgatcttcccagtgtggaaatggcttct-agaacattcatgcaaccaccgtgcctctcacccggcctgtgacaccaaggagcagggccagaggtcagttccaacgcagaagtgtcctccggggccc--------aggcggacgggc-agccaggcagacacaaggctcaa--------aggcttcga-------ccccgaagttactctgtgggaaattcttccaatctacacaccc-taaattatatgcagg-ttcatcctc----acctcatccaaacaaaagtcctcatgtgtcaagcatctcctgtccagaatgcagtacatgcagcgataa--acac------atcacacacaggaaa------agacgtatg------------------gcacaaacaca----acggcaattacat-----gtgcaagatagaacttttcagaaccc--------cagcatcggcgatg--cccagcg--ggactggcaattggaaaagcaactgcttctg--tggcg-ggccatg--------------ggtttaggctcaccgt--gctgtcacgatacaactctatttcccgcgt i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169090013 607 - 170955103 tcatgaggactttgagatc-caatttgaaaagagatgaactg-caataatttcactctggcatggtg---ggatccactcgtg--gttcaccatcacttctgtggatagttgaattactgctgatcttcccagtgtggaaatggcttct-agaacattcatgcaaccaccgtgcctctcacccggcctgtgacaccaaggagcagggccagaggtcagttccaacgcagaagtgtcctctggggccc--------aggtggacgggc-agccaggcagacacaaggctcaa--------aggcttcga-------ccccgaagttactctgtgggaaattcttccaatctacacaccc-taaattatatgcagg-ttcatcctc----acctcatccaaacaaaagtcctcatgtgtcaagcatctcctgtccagaatgcagtacatgcagcgataa--acac------atcacacaCAGGAAA------AGACGTATG------------------GCACAAACACA----ACGGCAATTACAT-----GTGCAAGATAGAACTTTTCAGAACCC--------CAGCATCGGCGATG--CCCAGCG--GGACTGGCAGCTGGAAAAGCAACTGCTTCTG--TGGCG-GGCCATG--------------GGTTTAGGCTCACCGT--GCTGTCACGATACAACTCTATTTCCCGCGT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8376559 607 + 10161646 tcatgaggactttgagatc-caatttgaaaagagatgaactg-caataatttcactctggcatggtg---ggatccactcgtg--gttcaccatcacttctgtggatagttgaattactgctgatcttcccagtgtggaaatggcttct-agaacattcatgcaaccaccgtgcctctcacccggcctgtgacaccaaggagcagggccagaggtcagttccaacgcagaagtgtcctccggggccc--------aggtggacgggc-agccaggcagacacaaggctcaa--------aggcttcga-------cccctaagttactctgtgggaaattcttccaatctacacaccc-taaattatatgcagg-ttcatcctc----acctcatccaaacaaaagtcctcatgtgtcaagcatctcctgtccagaatgcagtacatgcagcgataa--acac------atcacacacaggaaa------agatgtatg------------------gcacaaacaca----acggcaattacat-----gtgcaaggtagaacttttcagaaccc--------cagcatcggcgatg--cccagcg--ggactggcagttggaaaagcaactgcttctg--tggcg-ggccatg--------------ggtttaggctcaccgt--gctgtcacgatacaactctatttcccgcat i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1408286 606 + 3144229 tcatgaggactttgagatc-caatttgaaaagagatgaactg-caataatttcactctggcatggtg---ggatccactcgtg--gttcaccatcacttctgtggatagttgaattactgctgatcttcccagtgtggaaatggcttcc-agaacattcacccaaccaccgtgcctctcacgcagcctgtgacaccaaggagcagggccagaggtcagttctgacgcagaagtgtcctctggggccc--------aggcggacgggc-agtcaggcagacacagggttc-a--------aggcttcga-------ccctgaagttgctctgtgggaaattcttccaatctacacaccc-taaattatatgcagg-ttcatcctc----acctcatccaaacaaaagtcctcatgtgtcaagcatcttctgtccagaatgcagtacatgcagcgataa--acac------atcacacacaggaaa------agacgtatg------------------gcacaaacaca----acggcaattacac-----gtgcaagatagaacttttcagaaccc--------cagcatcggcgatg--cccagtg--ggactggcagttggaaaagcaactgcttctg--tggcg-ggtcatg--------------ggtttaggctcaccgt--gctgtcacgatacaactctatttcccgcgt i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96694827 606 + 98384682 tcatgaggactttgagatc-caatttgaaaagagatgaactg-caataatttcactctggcatggtg---ggatccactcgtg--gttcaccgtcacttctgtggatagttgaattactgctgatcttcccagtgtggaaatggcttcc-agaacattcatgcagccaccgtggctctcacccagcctgtgacaccaaggagcagggccagaggtcagttccaatgcagaagtgtcctccggggccc--------aggcggacaggc-agccaggcagacacaaggctcaa--------aggcttcga-------ccccgaagttactctgtgggaaattcttccaatctacacaccc-taaattatatgcagg-ttcatcctc----acctcatccaaacaaaagtcctcatctgtcaagcatctcctgtccagaatgcagtacatgcagcgataa--acac------atcacacaCGGGAAA------AGACGTATG------------------GC-CAAACACA----ACGGCAATTACAC-----GTGCAAGATAGAACTTTTCAGATCCC--------CAGCATCGGCGATG--CCCAGTG--GGACTGGCAGTTCGAAAAGCAACTGCTTCTG--TGGCG-GGCCATG--------------GGTTTAGGCTCACCGT--GCTGTCACGATACAACTCTATTTCCTGTGT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8230537 607 - 10857215 tcatgaggactttgagatc-caatttgaaaagagatgaactg-caataatttcactctggcatggtg---ggatccactcgtg--gttcaccatcacttctgtggatagttgaattactgctgatcttcccagtgtggaaatggcttcc-agaacattcacccaaccaccgtgcctctcacgcagcctgtgacaccaaggagcagggccagaggtcagttcccacgcagaagtgtcctcccgggccc--------aggcggacgggc-agccaggcaaacacaaggctcaa--------aggcttcga-------ccctgaagttgctctgtgggaaattcttccaatctacacaacc-taaattatatgcagg-ttcatcctc----acctcatccaaacaaaagtcctcatgtgtcaagcatctcctgtccagaatgcagtacatgcagcgataa--acac------atcacacacaggaaa------agacgtatg------------------gcacaagcaca----acggcaattacac-----gtgcaagacagaacttttcagaaccc--------cagcatcggcgatg--cccagtg--ggactggcagttggaaaagcaactgcttctg--tggcg-ggtcatg--------------ggtttaggctcaccgt--gctgtcacgatacaactctatttcccgcat i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15622347 606 - 23502949 tcatgaggactttgagatc-caatttgaaaagagatgaactg-caataatttcactctggcatggtg---ggatccactcgtg--gttcaccgtcacttctgtggatatttgaattactaatgatcttcccagtgtggaaatggcttcc-agaacattcacccaaccaccgtacctctcacccggcttgtgataccaaggagcagggccagaggtcagttccgaggcagaagcgtcctccggggccc--------aggggaatgggc-agccaggcagacacaaggctcaa--------agacgtcga-------ccccgaagttgttctgcgggaaattcttccaatctacacaccc-taaattatatgcagg-ttcatcctc----acctcatccgaacaaaagccctcatctgtcaaccgtctcctgtccagaatgcagtacatgcagcgataaacacac------atcacacacaggaaa------agacgtatg------------------gcacaaacaca----atggcaat---at-----gtgcaggatagaacttttgagaaccc--------cagcgtcggcgata--cccagtg--ggactggcagtcggaaaagcagctgcgtctg--tggcg-ggccatg--------------ggtttaggctcgccgt--gctgtcacgatacaactctgtttcctgcgt i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169902291 575 + 171630274 TCACGAGGACtttgagatc-cag-ttgaaaagtgatgagtgg-caagaatttcactctggcatggtg---ggatccacgcggg--gttcaccgtcccggc----------tgagttactgctgaccttcccagtgtgggaatggcttcc-agaacgttcacccaagcaccatgcctctcacttggcc--tgacaccaaagagcaaggctggaggtgagttccaacacagaagtgtcctccggggccc--------aaggaggtgggc-agctgagcagacacaaggctcaa-------gaggcgtcga-------cacggaggctgctctg--gggaa---TCCCACTGCACACGCCA-GAAGTCACACGCAGG-TTGGTCCTT----GCCTCGTCT------------------GTTGAGACGCC--TGTCGAGAATGCAGCA-ACGCAGCGATAA--ACAC------CCCACACACACGGGA--AGACAGACGTGTG------------------GCACAAACACA----ATGGCGAGT-----------------TAGACTTCTTCAGAA-CC--------CGGCGTGGGCGATG--CCCAGTG--CA-CCAGCAGTCGGAAAAGCAGGTGCTTCTG--TGGTG-GGCCACGGGAATCTTGACCGTGGGTTAGGCGCACCGGGAGCGCTAACAATACCCGCCTATTTTCCATAT i calJac3.chr4 I 5 C 0 s saiBol1.JH378287 1305897 599 - 2905041 TCATGAGGACtttgagatc-cagtttgaaaagtgataaatgg-caatcatttcactctggcacagtg---ggatccatgcggg--gcttgccgtcacgtc----------tgaattactgctgattttcccagtgtgggaatggcttcc-agaacattcactcaagcaccatgcctctcacttggcctgtgacatgaaagagcaaggctggaggtgagttccaacgcagaggtgtcctccggggccc--------aaggaggtgggc-agctgagcatacacaaggcccaa-------aaggcatcga-------cctggaagctgctctg--gggaactctcccaCTGCACACGCC--GGCGTCACA-GCAGC-TTAGTCCTT----GCCTGGCCCAAACAAAAGTCCTCACGGGTCGAGACGCCCGTGTCGAGGACGCAGCA-ACGCAGCGATGA--ACAC------ACCACACACACGAGA--GGACAGACATGTG------------------GCACAGACACA----ATGGCAGCT-----------------TAGACGTTTTCAGAA-CC--------CGGTGTGGGCGATG--CCCCGTG--GG-CCGGCAGCTGGAAAAGCAGGTGCCTCCG--TGGCA-GGCCACGGGAATCCTGACCGTGGGTTAGGCGCACCGGGAGCACCAACAATACACGACTATTTTCCACGT i saiBol1.JH378287 C 0 C 0 s canFam3.chr1 56184508 589 + 122678785 ------------------C-CCGTCTG-------------TG-CTGT-Gtttagtttgggcaaagtg---ggatattcacata--gtttgccattgcctctgtggacagttcaactactgcccatcttcccagcctggagacagcttct-agaatatccaccta--cacattgccctccacctggcctgtgac-ccaaagtggagggc-agaggccagtcccaatacagaggtgtcctctggg--cc--------agg--gttgggcaagctgggcagttggagggggggatggagggtaggctttgagggagtggcctgaagccattctgtgggaaatgcttacatttctcatgcccataaattattagcaggtttcatccag----acctggtcaaaacagaagtcctctcatgtccagaatattctgttaagaatgcaat---------gataa--acac------atgacatgtac----------atatataaa------------------atgcatacata----taaacatttatgctaataacgcaagatagaattcatcaaggcacacatcttgccttgtcagcaaggcacacatct--ggaatggtgttacggacagcaagtatttttg--gtgtgaagtcaca-------------tgttttacggccagcaa--ttaataacaataaaaatagatttcatgcat i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 584840 651 + 760995 tcat------ttttggatcacaatttagggaaaggtgaattgacgatgcatgggctctgggggggggacaggatacatttatgtagttcacaatcatttctataaacagttaggttactgctagtctttcctgtgtagagttggcttctaagaatagcctactgttctttgtcccttttacctgcattatgacacaaagaggcagagccagaggcaaatctcaacatgaaagtgtcctctggtgcctggttccagagggaggtaagt-agtggagaaggagcaaggtttga-------aaggtatgga-------gtcaggcaccattctggggccagtttttccaattcccatacct-ataagcataggttgc-atttttttggaaaacctagtcaaaatagaaattgtcttctgtcaagaatattc--tcaacaatgcagca-gtacaattataa--acatacaatgattacatatatgggatttaatatacatatatataaaaatctgcaaattatatagatataatttatggcaa----aa-----gtgcaaaatagaatttat-agaa-ct--------cagtttcagcagta--cacagtgctggaatggtattacaaaaagtaagtacttctgcatgtga-aatcaca-------------tgctttgtgtgtaccat---taataaaaataaaaataaatttcatgtat i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10958158 2272 - 12073884 I e aotNan1.NW_018494782v1 1517135 606 - 1813869 I e cebCap1.NW_016107695v1 1268309 603 - 2164891 I e nomLeu3.chr3 156314779 5603 + 157873769 I a score=1575425.000000 s hg38.chr6_KB021644v2_alt 118458 192 + 185823 ctctgg--------aaactgagttttctttctgttctctctaaggaaaacaatattaaaatagagatagccattggcacatgaaaaggtggttgaataatatgcagaaaaatt---gggggaaatgtgtatgt-ggggccgttattcagtag----aaacattgtatcacgttcagatgggccttgt---tg----gagaagatttgctaggtt--t s panTro5.chr6 173574582 192 + 175400573 ctctgg--------aaactgagttttctttctgttctctctatggaaaacaatattaaaatagagatagccattggcacatgaaaaggtggttgaataatatgcagaaaaatt---gggggaaatgtgtatgt-ggggccgttattcagtag----aaacattgtatcacgttcagatgggccttgt---tg----gagaagatttgctaggtt--t i panTro5.chr6 C 0 C 0 s panPan2.chr6 171808400 192 + 173848474 ctctgg--------aaactgagttttctttctgttctctctatggaaaacaatattaaaatagagatagccattggcacatgaaaaggtggttgaataatatgcagaaaaatt---gggggaaatgtgtatgt-ggggccgttattcagtag----aaacattgtatcacgttcagatgggccttgt---tg----gagaagatttgctaggtt--t i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11491047 191 - 12463322 ctctgg--------aaactgagttttc-ttctgttctctctatggaaaacaatattaaaatagagatagccattggcacatgaaaaggtggttgaataatatgcagaaaaatt---gggggaaacgtgtatgt-ggggccgttattcagtag----aaacattgtatcacgttcagatgcgccttgt---tg----gagaagatttgctaggtt--t i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170345236 193 + 172585720 ctctgg--------aaactgagttttctttctgttctgtctatggaaaacaacattaaaatagagataaccattggcacatgaaaaggtgtttgaataatatgcagaaaaatt--ggggggaaatgtgcatgt-gaggccgttattcagtgg----aaacgctgtaacacgttcagatgggcctcgt---ga----gagaagatttgctaggtt--t i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169090620 193 - 170955103 CTCTGG--------aaactgagttttctttctgttctgtctatggaaaacaacattaaaatagagataaccattggcacatgaaaaggtgtttgaataatatgcagaaaagtt--ggggggaaatgtgcatgt-gaggccgttattcagtgg----aaacgctgtaacacgttcagatgggcctcgt---ga----gagaagatttgctaggtt--t i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8377166 189 + 10161646 ctctgg--------aaactgagttttctttctgt----tctatggaaaacaacattaaaatagagataaccattggcacatgaaaaggtgtttgaataatatgcagaaaaatt--ggggggaaatgtgcatgt-gaggccgttattcagtgg----aaacgctgtaacacgttcagatgggcctcgt---ga----gagaagatttgctaggtt--t i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1408892 190 + 3144229 ctctgg--------aaactgagttttctttctgttctgtctatggaaaacagcattaaaatagagatagccattggcacatgaaaaggtggttgaataatatgcagaaaaatt--ggggggaaatgtgtatgt-gaggccgttattcagtgg----aaacgttgtaacatgttcagatgggcctcgt---ta----g---agatttgctaggtt--t i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96695433 193 + 98384682 CTCTGG--------aaactgagttttctttctgttctgtctatggaaaacaacattaaaatagagatagccagtagcacatgaaaaggtgtttgactaatatgcagaaaaatt--ggggggaaatgtatatgt-gaggccgtttttcagtgg----aaacgttgtaacacgttcagatgggcctggt---ga----gagaagatttgctaggtt--t i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8231144 190 - 10857215 ctctgg--------aaactgaattttctttctgttctgtctatggaaaacaacattaacatagagatagccattggcacatgaaaaggtggttgaataatatgcagaaaaatt--ggggggaaatgtgtatgt-gaggccgttattcagtgg----aaaggttgtaacacgttcagatgggcctcgt---ta----g---agatttgctaggtt--t i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15622953 195 - 23502949 ctctgg--------aaactgagctttctttctgttctgtctatggaaaacaacattaaaatagagatagccattggcacatgagaaggtggttgaataatatgcagaaaaatttgggggggaagtgtgtatgt-gaggccgttattcagtgg----aaacgttgtaacacgttcagatgggcctcgt---ta----gagaagattcgctaggtt--t i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169902866 186 + 171630274 CCCTGG--------aaactg--ttttgtttctgttctgtctatggaaaataacattaaaatagaggtagtcaccgg-acatggaaaggtggttgaataatatgcagaaaaatt---gggggaaacgtgtatgt-gaggccattattcagtag----aaaCGCCGCGTGGCGCTCAGGTGGGCCTTGT---------GAGAAGACCGGGCAGACT--- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1306496 186 - 2905041 CTCTGG--------aaactg--ttttctttctgttctctctatggaaaataacattaaaatagacgtagtcactgg-acatgggaaggtggttgaatcacatgcagaaaaatt---gggggaaacgtgtgtgt-gaggccattactcagcag----aaaCCTCGCATGGCGCTCAGATGGGCCTTGT---------GGGAAGCCTGGCCGGATT--- i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1268912 187 - 2164891 CTCTGG--------aaactg--ttttccttctgttctttctatggaaaataacattaaaatagaggtagtcactgg-acatggaaaggtagttgaataataagcagaaaaatt---gggggaaacgtgtacgt-gaggccattattcagtag----aaacatCGCCTGGCGCTCAGATGGGCCTTGT---------GAGAAGACTGGCCAGATTT-- i cebCap1.NW_016107695v1 I 603 I 14 s aotNan1.NW_018494782v1 1517741 187 - 1813869 ctctgg--------aaactg--ttttctttctgttctttctatggaaaataacattaaaatagaggtagtcactgg-acatggaaaggtggttgaataatatgcagaaaagtc---aggggaaacgtgtatgt-gaggccattactcagtag----aaacatCGCATGGCGCTCAGATGGGCCTTGT---------GAGAAGACTGGCCAGATT-T- i aotNan1.NW_018494782v1 I 606 I 15 s canFam3.chr1 56185097 188 + 122678785 ctatgg--------aaattgatttttcattctgttctctttataggaaa---cattaagttaggaatagtcattggtacatggaaaaatggtaaaagagtatgcagaaaa-tt---gggggaaattt---------ggcgtctattgggtagacaaaaatattatattatgctcgtgtgggttttat---tatgtttggagtacttgtcagagt--t i canFam3.chr1 C 0 I 1 s dasNov3.JH569188 585491 200 + 760995 ttatggtcgaggtaaaactgagttttctttctattcttgcagttcaaaatgatgttaaaataaaaatattcagtggcacatgaaaaggtgattaaatactatgcagaaaaatt----ttggaattgtttttatagtgtctaccagttactaa----aaa---tatattatttttaaatgaatttttcatatt----tatagtatttttcacact--t i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10958158 2272 - 12073884 I e nomLeu3.chr3 156314779 5603 + 157873769 I a score=49594.000000 s hg38.chr6_KB021644v2_alt 118650 16 + 185823 -tcagaacgcgtagtgt s panTro5.chr6 173574774 16 + 175400573 -tcagaacgcgtagtgt i panTro5.chr6 C 0 C 0 s panPan2.chr6 171808592 16 + 173848474 -tcagaacgcgtagtgt i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11491238 16 - 12463322 -tcagaacgcgtagtgt i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170345429 15 + 172585720 -tcag-atgcgtaatgt i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169090813 15 - 170955103 -tcag-atgcgtaatgt i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8377355 15 + 10161646 -tcag-atgcgtaatgt i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1409082 16 + 3144229 -tcagaatgcgtaatgt i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96695626 16 + 98384682 -tcagaatgcgtaatgt i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8231334 16 - 10857215 -tcagaatgcgtaatgt i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15623148 16 - 23502949 -tcagaatgcgtcatgt i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169903052 14 + 171630274 -TCAGGATGCAGCAC-- i calJac3.chr4 C 0 I 1 s saiBol1.JH378287 1306682 13 - 2905041 -CCAGGACGCAG-AC-- i saiBol1.JH378287 C 0 C 0 s canFam3.chr1 56185286 14 + 122678785 -tcaa-atgcataatt- i canFam3.chr1 I 1 C 0 s dasNov3.JH569188 585691 16 + 760995 ttaaacatgtataatt- i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10958158 2272 - 12073884 I e aotNan1.NW_018494782v1 1517928 15 - 1813869 I e cebCap1.NW_016107695v1 1269099 14 - 2164891 I e nomLeu3.chr3 156314779 5603 + 157873769 I a score=2300.000000 s hg38.chr6_KB021644v2_alt 118666 1 + 185823 t s panTro5.chr6 173574790 1 + 175400573 t i panTro5.chr6 C 0 C 0 s panPan2.chr6 171808608 1 + 173848474 t i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11491254 1 - 12463322 c i gorGor5.CYUI01015032v1 C 0 C 0 s calJac3.chr4 169903067 1 + 171630274 T i calJac3.chr4 I 1 C 0 s saiBol1.JH378287 1306695 1 - 2905041 T i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1269113 1 - 2164891 T i cebCap1.NW_016107695v1 I 14 C 0 s canFam3.chr1 56185300 1 + 122678785 t i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 585707 1 + 760995 t i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10958158 2272 - 12073884 I e aotNan1.NW_018494782v1 1517928 15 - 1813869 I e colAng1.NW_012114488v1 15623164 0 - 23502949 C e chlSab2.chr13 96695642 0 + 98384682 C e cerAty1.NW_012002071v1 1409098 0 + 3144229 C e nomLeu3.chr3 156314779 5603 + 157873769 I e manLeu1.NW_012106474v1 8231350 0 - 10857215 C e macNem1.NW_012011000v1 8377370 0 + 10161646 C e rheMac8.chr4 170345444 0 + 172585720 C e macFas5.chr4 169090828 0 - 170955103 C a score=448641.000000 s hg38.chr6_KB021644v2_alt 118667 61 + 185823 gttgaggtttctcttctcactgcaggcgag-----ggcttcctgct-----gtccttcctgtttgtaattc s panTro5.chr6 173574791 61 + 175400573 gttgaggtttctcttctcactgcaggcgag-----ggcttcctgct-----gtccttcctgttcgtaattc i panTro5.chr6 C 0 C 0 s panPan2.chr6 171808609 61 + 173848474 gttgaggtttctcttctcactgcaggcgag-----ggcttcctgct-----gtccttcctgttcgtaattc i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11491255 61 - 12463322 gttgaggtttctcttctcactgcaggcgag-----ggcttcctgct-----gtccttcctgttcgtaattc i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170345444 61 + 172585720 gttgaggtttctcttctcactgcaggcgag-----ggcttcctgct-----gtccttcctatttgtaattt i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169090828 61 - 170955103 gttgaggtttctcttctcactgcaggcgag-----ggcttcctgct-----gtccttcctatttgtaattt i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8377370 61 + 10161646 gttgaggtttctcttctcactgcaggcgag-----ggcttcctgct-----gtccttcctatttgtaattt i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1409098 61 + 3144229 gttgaggtttctcttctcactgcaggcgag-----ggcttcctgct-----gtccttcctatttgtaattt i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96695642 61 + 98384682 gttgaggtttctcttctcactgcaggcgag-----ggctccctgct-----gtccttcctatttgtaattt i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8231350 61 - 10857215 gttgaggtttctcttctcactgcaggcgag-----ggcttcctgct-----gtccttcctatttgtaattt i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15623164 61 - 23502949 gttgaggtttctcttctcactgcaggccag-----ggcttcctgct-----gtccttcctatttgtaatct i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169903068 56 + 171630274 GCCGAGGTTTC-CCTCCCG-GGCA-GCGCG-----GCCT-CCTGCT-----GTCT-TCCCGTCAGTTCCTG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1306696 59 - 2905041 GCTGAGGCTCC-CCTCCCG-TGCAGGCGCG-----GCCTCCCTGCC-----GTCTCTCCTGTCTGTGTTTG i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1269114 60 - 2164891 GCTGAGGTTTC-CTCCCCGTGGCAGGTGCA-----GCCTCCCTGCT-----GTCTTTCCTGTCTGTATTTG i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1517943 60 - 1813869 GCTGACGTTTC-CTTCCCGTGGCGGGCGTG-----GCCTCCCTGTT-----GTCTTTCCTGTCCGTATTTG i aotNan1.NW_018494782v1 I 15 C 0 s canFam3.chr1 56185301 66 + 122678785 gttgaggtttctttccacattgtgaataaa-----tgttcacttttataacgcattttctatttgtgcttc i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 585708 66 + 760995 gttgagatctcttttctcaatctaaataaatgtttgcttttctaat-----tcattttttatttgtacttt i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10958158 2272 - 12073884 I e nomLeu3.chr3 156314779 5603 + 157873769 I a score=1102291.000000 s hg38.chr6_KB021644v2_alt 118728 121 + 185823 ggttttacttttcttacag-ggcttccgaaatcattgaagtgt---------caaaacctgaatccac--cAGAATGTGTCCATGGAACTGAAAAC-TATCAGATAT----TTAGACA-----GGGTGCGTTAAAGGGCTCAC-- s panTro5.chr6 173574852 121 + 175400573 ggttttacttttcttacag-ggcttccgaaatcattgaagtgt---------caaaacctgaatccac--cAGAATGTGTCCATGGAACTGAAAAT-TATCAGATAT----TTAGACA-----GGGTGTGTTAAAGGGCTCAC-- i panTro5.chr6 C 0 C 0 s panPan2.chr6 171808670 121 + 173848474 ggttttacttttcttacag-ggcttccgaaatcattgaagtgt---------caaaacctgaatccac--cAGAATGTGTCCATGGAACTGAAAAT-TATCAGATAT----TTAGACA-----GGGTGTGTTAAAGGGCTCAC-- i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11491316 121 - 12463322 ggttttacttttcttacag-ggcttccgaaatcattgaagtgt---------caaaacctgaatccac--cAGAATGTGTCCATGGAACTGAAAAC-TATCAGATAT----TTAGACA-----GGGTGTGTTAAAGGGCTCAC-- i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156320382 119 + 157873769 ggTTTTACTTTTCTTACAC-GGCTTCCGAAATCATTGAAGTGT---------CAAAACCTGAATCCAC--CTGAATGTGTCCATGGAACGGAAAAT-TATCAGATAT----TTAGAC-------GGTGTGTTAAAGGGCTCAC-- i nomLeu3.chr3 I 5603 C 0 s rheMac8.chr4 170345505 121 + 172585720 ggttttacttttcttagag-ggcttgcgaaatcattgaagtat---------caaaacctgaatccac--ccGAATGTGTCCATGGACCTGAAAAT-TATCAGATAT----TTAGACA-----GGGTGTGTTAAAGGGCTCAC-- i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169090889 121 - 170955103 ggttttacttttcttagag-ggcttgcgaaatcattgaagtat---------caaaacctgaatccac--ccGAATGTGTCCATGGACCTGAAAAT-TATCAGCTAT----TTAGACA-----GGGTGTGTTAAAGGGCTCAC-- i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8377431 121 + 10161646 ggttttacttttctcagag-ggcttgcgaaatcattgaagtat---------caaaacctgaatccac--ccGAATGTGTCCATGGACCTGAAAAT-TATCAGATAT----TTAGACA-----GGGTGTGTTAAAGGGCTCAC-- i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1409159 121 + 3144229 ggttttacttttcttagag-ggcttgcgaaatcattgaagtat---------caaaacctgaatccac--ccGAATGTGTCCATGGACCTGAAAAG-TATCAGATAT----TTAGACA-----GGGTGTGTTAAAGGGCTCAC-- i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96695703 120 + 98384682 ggttttacttttctaagag-ggcttgcgaaatcattgaagtat---------caaaacctgaatccac--ccGAATGTGTCCATGGACCTGAAAAT-TATCAGATA-----TTAGACA-----GGGTGTGTTAAAGGGCTCAC-- i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8231411 121 - 10857215 ggttttacttttcttagag-ggcttgcgaaatcattgaagtat---------caaaacctgaatccac--ccGAATGTGTCCATGGACCTGAAAAT-TCTCAGATAT----TTAGACA-----GGGTGTGTTAAAGGGCTCAC-- i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15623225 121 - 23502949 ggttttacttttcttagag-ggcttgcgaaatcattgaagtgt---------caaaacctgaatccac--ccGAATGTGTCCATGGAACTGAAAAT-TATCAGATAT----TTAGACA-----GGGTGTGTTAAAGGGCTCAC-- i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169903124 98 + 171630274 GGTTTGACTTTCCTTAGAG-GGTTTCCTAAATCACTGCAGGGT---------CAGAGCCCGAGTCCAC--CCGGATGTGTCACTGGAACTGAAACG-TGTCA--------------------------------GAGGCTCAC-- i calJac3.chr4 C 0 I 14 s saiBol1.JH378287 1306755 121 - 2905041 GGTTTTACTTTTCTTAGAG-GGTTTCCTAAATCACTCAAGGGT---------CAAAACCTGAGTCCAC--CCAAATGTGTCCATGGAACTGAAAAA-TGTCAGCTAT----TTGGACA-----GGGCGCGTTGGGAGGCTCAC-- i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1269174 120 - 2164891 GGTTTCACTTTTCTTAGAG-GGTTTCCTAAATCACTCAAGGGT---------CAAAACCTGAATCCAC--CCGAATGTGTCCATGGAACTGAAA-A-TGTCAGATAT----TTGGACA-----GGGTGTGTTCAGAGGCTCAC-- i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1518003 104 - 1813869 GGTTTTACTTTTCTTAGAG-GGTTTCCTAAATCA-------------------------TGAATCCAC--CCGAATGTGTCCGTGGAACTGAAA-A-TGTCAGATAT----TTGGACA-----GGGTGTGTTCAGAGGCTCAC-- i aotNan1.NW_018494782v1 C 0 C 0 s canFam3.chr1 56185367 120 + 122678785 cgtgttacttttgttaga--ggctccctgaatCTTCTCGGTGT---------GAAAACCTGCATCCAC--CTGAGTGTATCCGTCAACCTGAAAATGCCTCAGATGTGTCCATAGACA-----CCGAG-GTTTATGTAC------ i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 585774 134 + 760995 ggccttatttttcttacagagggctcctaaatcatt----tgtcatgccccacaaaacctgaatccacctctAAAGGTTTTCACATAA--GAAAGT-TTACAGCTAT----TCAGACACTGAGAGATGTGCTAAAGAGGCTTTAA i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10958158 2272 - 12073884 I a score=366149.000000 s hg38.chr6_KB021644v2_alt 118849 40 + 185823 CGTGCGTCCGTTTTATGCCGTAATTATGTGCACAAATAAT s panTro5.chr6 173574973 40 + 175400573 CGTGCGTCCGTTTTATGCCGTAATTATGTGCACAAATAAT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171808791 40 + 173848474 CGTGCGTCCGTTTTATGCCGTAATTATGTGCACAAATAAT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11491437 40 - 12463322 CGTGCGTCCGTTTTATGCCGTAATGATGTGCACAAATAAT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156320501 40 + 157873769 CGTGCGTCCGTTTTATGCCGTATTTATGTGCGCAAATAAT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170345626 40 + 172585720 CGTGCGGCCGTTTTATGCCGTAATTATGTGCACAAATTAT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169091010 40 - 170955103 CGTGCGGCCGTTTTATGCCGTAATTATGTGCACAAATTAT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8377552 40 + 10161646 CGTGCGGCCGTTTTATGCCGTAATTATGTGCACAAATTAT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1409280 40 + 3144229 CGTGCGGCCGTTTTATGCCGTAATTATGTGCACAAATTAT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96695823 40 + 98384682 CGTGCGGCCGTTTTATGCCGTAATTATGTGCACAAATTAT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8231532 40 - 10857215 GGTGCGGCCGTTTTATGCCGTAATTATGTGCACAAATTAT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15623346 40 - 23502949 CGTGCGGCCGTTTTATGCCGTAATTATGTGCACAAATAAT i colAng1.NW_012114488v1 C 0 C 0 s saiBol1.JH378287 1306876 39 - 2905041 -AGGCGTCCGTTGTAGGCCGTAGTCATGTGCACAGACAAC i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1269294 40 - 2164891 AGTGCTTTTGTTTTATGCCGTGGTCATGTGCACAAACAAT i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1518107 40 - 1813869 AGTGCGTCCGTTTTATGCCGTAGTCATGTGCACAAACAAT i aotNan1.NW_018494782v1 C 0 C 0 s canFam3.chr1 56185487 40 + 122678785 TGCGTGTCTGTTTTATACCAGAATTTCGAGGGTCAGTAAT i canFam3.chr1 C 0 I 1004 s dasNov3.JH569188 585908 39 + 760995 AATGCGT-TGTGTTATGCTATAATTATGCGCACAAGTAAT i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10958158 2272 - 12073884 I e calJac3.chr4 169903222 14 + 171630274 I a score=-215.000000 s hg38.chr6_KB021644v2_alt 118889 1 + 185823 -T s panTro5.chr6 173575013 1 + 175400573 -T i panTro5.chr6 C 0 C 0 s panPan2.chr6 171808831 1 + 173848474 -T i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11491477 1 - 12463322 -G i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156320541 1 + 157873769 -T i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170345666 1 + 172585720 -T i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169091050 1 - 170955103 -T i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8377592 1 + 10161646 -T i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1409320 1 + 3144229 -T i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96695863 1 + 98384682 -T i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8231572 1 - 10857215 -T i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15623386 1 - 23502949 -T i colAng1.NW_012114488v1 C 0 C 0 s saiBol1.JH378287 1306915 1 - 2905041 -T i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1269334 1 - 2164891 -T i cebCap1.NW_016107695v1 C 0 I 77 s aotNan1.NW_018494782v1 1518147 1 - 1813869 -T i aotNan1.NW_018494782v1 C 0 C 0 s dasNov3.JH569188 585947 1 + 760995 G- i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10958158 2272 - 12073884 I e calJac3.chr4 169903222 14 + 171630274 I e canFam3.chr1 56185527 1004 + 122678785 I a score=99949.000000 s hg38.chr6_KB021644v2_alt 118890 27 + 185823 GCATGGCCGGCGTCGC-------GTGAGACGCGG------ s panTro5.chr6 173575014 27 + 175400573 GCATGGCCGGCGTCGT-------GTGAGACGCAG------ i panTro5.chr6 C 0 C 0 s panPan2.chr6 171808832 27 + 173848474 GCATGGCCGGCGTCGT-------GTGAGACGCAG------ i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11491478 27 - 12463322 GCACGGCCGGCTTCGT-------GTGAGACGCAG------ i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156320542 27 + 157873769 GCATGGCCGGCTTCGT-------GTGAGACGCAG------ i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170345667 22 + 172585720 GCATGGCCGGCTTCCT------------ACGCAG------ i rheMac8.chr4 C 0 I 1 s macFas5.chr4 169091051 22 - 170955103 GCATGGCCGGCTTCCT------------ACGCAG------ i macFas5.chr4 C 0 I 1 s macNem1.NW_012011000v1 8377593 22 + 10161646 GCATGGCCGGCTTCCT------------ACGCAG------ i macNem1.NW_012011000v1 C 0 I 1 s cerAty1.NW_012002071v1 1409321 22 + 3144229 GCATGGCCGGCTTCCT------------ACGCAG------ i cerAty1.NW_012002071v1 C 0 I 1 s chlSab2.chr13 96695864 22 + 98384682 GCATGGCCGGCTTCCT------------ACGCAG------ i chlSab2.chr13 C 0 I 1 s manLeu1.NW_012106474v1 8231573 22 - 10857215 GCAGGGCCGGCTTCCT------------ACGCAG------ i manLeu1.NW_012106474v1 C 0 I 1 s colAng1.NW_012114488v1 15623387 27 - 23502949 GCACGGCCGGCTTCCT-------GCGAGACGCAG------ i colAng1.NW_012114488v1 C 0 I 1 s saiBol1.JH378287 1306916 27 - 2905041 GCGTGAACGGCCCCGC-------TTGAGGCTCAG------ i saiBol1.JH378287 C 0 C 0 s aotNan1.NW_018494782v1 1518148 26 - 1813869 GTGTGAACGGCTCCGC-------TCGAGGCACG------- i aotNan1.NW_018494782v1 C 0 C 0 s dasNov3.JH569188 585948 40 + 760995 ATATTAATGATTTTGATTTCCCAATGAGAAGCATCTAAAA i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10958158 2272 - 12073884 I e cebCap1.NW_016107695v1 1269335 77 - 2164891 I e calJac3.chr4 169903222 14 + 171630274 I e canFam3.chr1 56185527 1004 + 122678785 I a score=95117.000000 s hg38.chr6_KB021644v2_alt 118917 14 + 185823 GAAGGACCGGGGAG s panTro5.chr6 173575041 14 + 175400573 GAAGGACCGGGGAG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171808859 14 + 173848474 GAAGGACCGGGGAG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11491505 14 - 12463322 GAAGGACCGGGGAG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156320569 14 + 157873769 AAAGGACCGGGGAG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170345690 14 + 172585720 AAAGGACGTGGGAG i rheMac8.chr4 I 1 C 0 s macFas5.chr4 169091074 14 - 170955103 AAAGGACGTGGGAG i macFas5.chr4 I 1 C 0 s macNem1.NW_012011000v1 8377616 14 + 10161646 AAAGGACGTGGGAG i macNem1.NW_012011000v1 I 1 C 0 s cerAty1.NW_012002071v1 1409344 14 + 3144229 AAAGGACCCGGGAG i cerAty1.NW_012002071v1 I 1 C 0 s chlSab2.chr13 96695887 14 + 98384682 AAAGGACGTGGGAG i chlSab2.chr13 I 1 C 0 s manLeu1.NW_012106474v1 8231596 14 - 10857215 GAAGGACCCGGGAG i manLeu1.NW_012106474v1 I 1 C 0 s colAng1.NW_012114488v1 15623415 14 - 23502949 AAAGGAGGTGGGAG i colAng1.NW_012114488v1 I 1 C 0 s calJac3.chr4 169903236 14 + 171630274 GAAGGAACGGGGAG i calJac3.chr4 I 14 C 0 s saiBol1.JH378287 1306943 13 - 2905041 -AAGGAGCCGAGCG i saiBol1.JH378287 C 0 C 0 s aotNan1.NW_018494782v1 1518174 14 - 1813869 GAAGGAACCAGGAG i aotNan1.NW_018494782v1 C 0 I 21 s dasNov3.JH569188 585988 14 + 760995 GAATTACTAAGGAA i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10958158 2272 - 12073884 I e cebCap1.NW_016107695v1 1269335 77 - 2164891 I e canFam3.chr1 56185527 1004 + 122678785 I a score=137880.000000 s hg38.chr6_KB021644v2_alt 118931 28 + 185823 ----CGGCAGAACCAGG--------GCTTCCAATTCCCGT- s panTro5.chr6 173575055 28 + 175400573 ----GAGCAGAACCAGG--------GCTTCCAATTCCTGT- i panTro5.chr6 C 0 C 0 s panPan2.chr6 171808873 28 + 173848474 ----GAGCAGAACCAGG--------GCTTCCAATTCCTGT- i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11491519 28 - 12463322 ----CAGCAGAACCAGG--------GCTTCCAATGCCTGT- i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156320583 28 + 157873769 ----GAGCAGAACCAGG--------GCTTCCAATTCCTGT- i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170345704 28 + 172585720 ----GAGCAGAACCAGG--------GTTTCCAAGTCCTGT- i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169091088 28 - 170955103 ----GAGCAGAACCAGG--------GTTTCCAAGTCCTGT- i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8377630 36 + 10161646 ----GAGCAGAACCAGGGGTTCCAAGTTTCCAAGTCCTGT- i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1409358 28 + 3144229 ----GAGCAGAACCAGG--------GTTTCCAAGTCCCGT- i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96695901 28 + 98384682 ----GAGCAGAACCAGG--------GTTTCCAAGTCCTGT- i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8231610 28 - 10857215 ----GAGCAGAACCAGG--------GTTTCCGAGTCCTGT- i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15623429 28 - 23502949 ----CAGCAGAACCAGG--------GTTTCCAAGTCCCGT- i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169903250 27 + 171630274 ----GAGCAGGACGGCT--------GAGGCCGAGTCCTG-- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1306956 27 - 2905041 ----GAGCGGGACGGCC--------AAGGTCAAGTCCTG-- i saiBol1.JH378287 C 0 C 0 s dasNov3.JH569188 586002 29 + 760995 TGTTATACAGGAACAAA--------AT----AAGTCCCTAG i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10958158 2272 - 12073884 I e aotNan1.NW_018494782v1 1518188 21 - 1813869 I e cebCap1.NW_016107695v1 1269335 77 - 2164891 I e canFam3.chr1 56185527 1004 + 122678785 I a score=283420.000000 s hg38.chr6_KB021644v2_alt 118959 28 + 185823 ----CCGCG-TTTAAAGCGCGCCAGCGCCCTCT s panTro5.chr6 173575083 28 + 175400573 ----CCGCG-TTTGAAGCGCGCCAGCGCCCTCT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171808901 28 + 173848474 ----CCGCG-TTTAAAGCGCGCCAGCGCCCTCT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11491547 28 - 12463322 ----CCGCG-TTTAAAGCGCGCCAGCGCCCTCT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156320611 28 + 157873769 ----CCGCG-TTTAAAGCGCGCCGGCGCCCTCT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170345732 28 + 172585720 ----CCGCG-TTTAAAGCGCGCCAGCGCCCTCT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169091116 28 - 170955103 ----CCTCG-TTTAAAGCGCGCCAGCGCCCTCT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8377666 28 + 10161646 ----CCTCG-TTTAAAGCGCGCCAGCGCCCTCT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1409386 28 + 3144229 ----CCGCG-TTTAAAGCGCGCCAGCGCCCTCT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96695929 28 + 98384682 ----CCGCG-TTTAAAGCGCGCCAGCGCCCTCT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8231638 28 - 10857215 ----CCGCG-TTTAAAGCGCGCCAGCGCCCTCT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15623457 28 - 23502949 ----CCGCG-TTTACAGCGCGCCAGCGCCCTCT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169903277 28 + 171630274 ----CCGCG-TGGAAAGCACGCCGGTGCCCTCT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1306983 28 - 2905041 ----CCGCG-TGGGAAGCGCGCTGGGGCCCTCT i saiBol1.JH378287 C 0 I 2 s cebCap1.NW_016107695v1 1269412 28 - 2164891 ----CCGCG-TGTAAAGCGCGCTGGTGCCCTCT i cebCap1.NW_016107695v1 I 77 C 0 s aotNan1.NW_018494782v1 1518209 28 - 1813869 ----CCGCG-TGTAAAGCGCGCTGGTGCCCTCT i aotNan1.NW_018494782v1 I 21 C 0 s dasNov3.JH569188 586031 33 + 760995 CTAAATGTGTTTTAAAACGAGACAGTGTCTCCT i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10958158 2272 - 12073884 I e canFam3.chr1 56185527 1004 + 122678785 I a score=18630.000000 s hg38.chr6_KB021644v2_alt 118987 2 + 185823 GG s panTro5.chr6 173575111 2 + 175400573 GG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171808929 2 + 173848474 GG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11491575 2 - 12463322 GG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156320639 2 + 157873769 GG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170345760 2 + 172585720 GG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169091144 2 - 170955103 GG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8377694 2 + 10161646 GG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1409414 2 + 3144229 GG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96695957 2 + 98384682 GG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8231666 2 - 10857215 GG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15623485 2 - 23502949 GG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169903305 1 + 171630274 -G i calJac3.chr4 C 0 I 1 s cebCap1.NW_016107695v1 1269440 1 - 2164891 -G i cebCap1.NW_016107695v1 C 0 I 1 s aotNan1.NW_018494782v1 1518237 1 - 1813869 -G i aotNan1.NW_018494782v1 C 0 I 1 s dasNov3.JH569188 586064 2 + 760995 GG i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10958158 2272 - 12073884 I e saiBol1.JH378287 1307011 2 - 2905041 I e canFam3.chr1 56185527 1004 + 122678785 I a score=162042.000000 s hg38.chr6_KB021644v2_alt 118989 14 + 185823 TGCTCAGGCTGCGC s panTro5.chr6 173575113 14 + 175400573 TGCTCAGGCTGCGC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171808931 14 + 173848474 TGCTCAGGCAGCGC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11491577 14 - 12463322 TGCTCAGGCTGCGC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156320641 14 + 157873769 TGCTCAGGCTGCGC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170345762 14 + 172585720 TGCTCAGGCTGCGC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169091146 14 - 170955103 TGCTCAGGCTGCGC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8377696 14 + 10161646 TGCTCAGGCTGCGC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1409416 14 + 3144229 TGCTCAGGCTGCGC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96695959 14 + 98384682 TGCTCAGGCTGCGC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8231668 14 - 10857215 TGCTCAGGCTGCGC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15623487 14 - 23502949 TGCTCAGGCTGCGC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169903307 14 + 171630274 TGCTCAGGCTGCGC i calJac3.chr4 I 1 C 0 s saiBol1.JH378287 1307013 14 - 2905041 TGCTCAGGCTGCGC i saiBol1.JH378287 I 2 C 0 s cebCap1.NW_016107695v1 1269442 14 - 2164891 TGCTTAGGCTGCGC i cebCap1.NW_016107695v1 I 1 C 0 s aotNan1.NW_018494782v1 1518239 14 - 1813869 TGCTCAGGCTGCGC i aotNan1.NW_018494782v1 I 1 C 0 s dasNov3.JH569188 586066 14 + 760995 TGGTAAAGCTTCTT i dasNov3.JH569188 C 0 I 63 e otoGar3.GL873575 10958158 2272 - 12073884 I e canFam3.chr1 56185527 1004 + 122678785 I a score=174314.000000 s hg38.chr6_KB021644v2_alt 119003 19 + 185823 AGCGCGCCGGCTCCGCGGG s panTro5.chr6 173575127 19 + 175400573 AGCGCGCCGGCTCCGCGGG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171808945 19 + 173848474 AGCGCGCCGGCTCCGCGGG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11491591 19 - 12463322 AGCGCGCCGGCTCCGCGGG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156320655 19 + 157873769 AGCGCGCCGGCTCCGCGGG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170345776 19 + 172585720 AGCGCGCCGGCTCCGCGGG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169091160 19 - 170955103 AGCGCGCCGGCTCCGCGGG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8377710 19 + 10161646 AGCGCGCCGGCTCCGCGGG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1409430 19 + 3144229 AGCGCGCCGGCTCCGCGGG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96695973 19 + 98384682 AGCGCGCCGGCTCCGCGGG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8231682 19 - 10857215 AGCGCGCCGGCTCCGCGGG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15623501 19 - 23502949 AGCGCGCCGGCTCCGCGGG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169903321 5 + 171630274 AGCGC-------------- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1307027 19 - 2905041 GGCACGCCGGCTCCCTGGG i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1269456 19 - 2164891 AGCACGCAGGTTCCGTGGG i cebCap1.NW_016107695v1 C 0 I 51 s aotNan1.NW_018494782v1 1518253 19 - 1813869 AGCACGCCGGCTCCGCGGG i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10958158 2272 - 12073884 I e dasNov3.JH569188 586080 63 + 760995 I e canFam3.chr1 56185527 1004 + 122678785 I a score=10821.000000 s hg38.chr6_KB021644v2_alt 119022 2 + 185823 TG s panTro5.chr6 173575146 2 + 175400573 TG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171808964 2 + 173848474 TG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11491610 2 - 12463322 TG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156320674 2 + 157873769 TG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170345795 2 + 172585720 TG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169091179 2 - 170955103 TG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8377729 2 + 10161646 TG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1409449 2 + 3144229 TG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96695992 2 + 98384682 CG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8231701 2 - 10857215 TG i manLeu1.NW_012106474v1 C 0 I 241 s colAng1.NW_012114488v1 15623520 2 - 23502949 AG i colAng1.NW_012114488v1 C 0 C 0 s saiBol1.JH378287 1307046 1 - 2905041 -G i saiBol1.JH378287 C 0 C 0 s aotNan1.NW_018494782v1 1518272 1 - 1813869 -G i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10958158 2272 - 12073884 I e cebCap1.NW_016107695v1 1269475 51 - 2164891 I e calJac3.chr4 169903326 0 + 171630274 C e dasNov3.JH569188 586080 63 + 760995 I e canFam3.chr1 56185527 1004 + 122678785 I a score=244902.000000 s hg38.chr6_KB021644v2_alt 119024 42 + 185823 CCGCCAAGGGCCGGGGCTGCC------TGGGGGCCTGCCCGGGGTTCC s panTro5.chr6 173575148 42 + 175400573 CCGCCAAGGGCCGGGCCTGCC------TGGGGGCCTGCCCGGGGTTCC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171808966 41 + 173848474 CCGCCAAGGGCCGGGCCTGCC------TGGGGGCCTGCCC-GGGTTCC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11491612 42 - 12463322 CCGCCAAGGGCCGGGCCTGCC------TGGGGGCCTGCCCGGGGTTCC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156320676 42 + 157873769 CCGCCAAGGGCCGGGCCTGCC------TGGGGGCCTGCCCGGGGTTCC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170345797 42 + 172585720 CCGCCAAGGGCCGGGCCTGCC------CAGGGGCCTGCCCGGAGTTCC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169091181 42 - 170955103 CCGCCAAGGGCCGGGCCTGCC------CAGGGGCCTGCCCGGAGTTCC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8377731 42 + 10161646 CCGCCAAGGGCCGGGCCTGCC------CAGGGGCCTGCCCGGAGTTCC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1409451 42 + 3144229 CCGCCAAGGGCCGGGCCTGCC------CAGGGGCCTGCCCGGAGTTCC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96695994 42 + 98384682 CCGCCAAGGGCCGGGCCTGCC------CAGGGGCCTGCCCGGAGTTCC i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15623522 42 - 23502949 CCGCCAAGGGCCGGGCCTGCC------CAGGCGCCTGCCCGGAGTTCC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169903326 20 + 171630274 ---------GCCAGGCCTGCC-------------------GGGGTTCT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1307047 30 - 2905041 CCGCCCGAGGCCAGGCCTGCC------------------GGGGGTTCT i saiBol1.JH378287 C 0 C 0 s aotNan1.NW_018494782v1 1518273 48 - 1813869 CCGTCCGAGGCCAGGCCTGCCAGGGGTTCTAGACCTGCCGGGGGTTCT i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10958158 2272 - 12073884 I e cebCap1.NW_016107695v1 1269475 51 - 2164891 I e dasNov3.JH569188 586080 63 + 760995 I e canFam3.chr1 56185527 1004 + 122678785 I e manLeu1.NW_012106474v1 8231703 241 - 10857215 I a score=174872.000000 s hg38.chr6_KB021644v2_alt 119066 23 + 185823 AGACCTGCTGGACCGTGCATGGC s panTro5.chr6 173575190 23 + 175400573 AGACCTGCTGGACCGTGCATGGC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171809007 23 + 173848474 AGACCTGCTGGACCGTGCATGGC i panPan2.chr6 C 0 I 38 s gorGor5.CYUI01015032v1 11491654 23 - 12463322 AGACCTGCTGGACCGTGCATGGC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156320718 23 + 157873769 AGACCTGCTGGACCGTGCAAGGC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170345839 23 + 172585720 AGACCTGCAGGACTGTGCACGGC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169091223 23 - 170955103 AGACCTGCAGGACCGTGCACGGC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8377773 23 + 10161646 AGACCTGCAGGACCGTGCACGGC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1409493 23 + 3144229 AGACCTGCAGGACTGTGCATGGC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96696036 23 + 98384682 AGACCTCCAAGACTGTGCACGGC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8231944 23 - 10857215 AGACCTGCAGGACCGTGCATGGC i manLeu1.NW_012106474v1 I 241 C 0 s colAng1.NW_012114488v1 15623564 23 - 23502949 AGACCTGCAGGACCGTGCACGGC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169903346 23 + 171630274 AACCCAGACGGACCCTGCAGGGC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1307077 23 - 2905041 AGATCTGCCGGACCCTGCGTGGC i saiBol1.JH378287 C 0 C 0 s aotNan1.NW_018494782v1 1518321 23 - 1813869 AAACCTGCCGGACCCTGCGTGGC i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10958158 2272 - 12073884 I e cebCap1.NW_016107695v1 1269475 51 - 2164891 I e dasNov3.JH569188 586080 63 + 760995 I e canFam3.chr1 56185527 1004 + 122678785 I a score=164784.000000 s hg38.chr6_KB021644v2_alt 119089 24 + 185823 TCATCAGGC---------------------------------------------------CGGGCCTGTCCAGGG s panTro5.chr6 173575213 75 + 175400573 TCATCAGGCTGGGCCTGCCCGGGGTTCCAGACCTGCTGGACCGTGCATGGCTCATCAGGCCGGGCCTGTCCAGGG i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11491677 24 - 12463322 TCATCAGGC---------------------------------------------------CAGGCCTGTCCAGGG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156320741 24 + 157873769 TCATCAGGC---------------------------------------------------CAGGCCTGTCCAGGG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170345862 24 + 172585720 TCATCAGGC---------------------------------------------------AGGGCCTGTCCAGGG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169091246 24 - 170955103 TCATCAGGC---------------------------------------------------AGGGCCTGTCCAGGG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8377796 24 + 10161646 TCATCAGGC---------------------------------------------------CGGGCCTGTCTAGGG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1409516 24 + 3144229 TCATCAGAC---------------------------------------------------CGGGCCTGTCCAGGG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96696059 24 + 98384682 TCATCAGGC---------------------------------------------------CGGGCCTGCCCAGGG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8231967 24 - 10857215 TCATCAGGC---------------------------------------------------CGGGCCTGTCCAGGA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15623587 24 - 23502949 TCATCAAGC---------------------------------------------------CGGGCCTGTGCAGGG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169903369 24 + 171630274 TCATCGGGC---------------------------------------------------CGGGCCTGTCCAGGG i calJac3.chr4 C 0 T 67 s saiBol1.JH378287 1307100 24 - 2905041 TCATCAGGC---------------------------------------------------CGGGCCTGTCCAGGG i saiBol1.JH378287 C 0 T 58 s aotNan1.NW_018494782v1 1518344 24 - 1813869 CCATCAGGC---------------------------------------------------CGGGCCTGTCCAGGG i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10958158 2272 - 12073884 I e cebCap1.NW_016107695v1 1269475 51 - 2164891 I e dasNov3.JH569188 586080 63 + 760995 I e canFam3.chr1 56185527 1004 + 122678785 I e panPan2.chr6 171809030 38 + 173848474 I a score=-3574.000000 s hg38.chr6_KB021644v2_alt 119113 5 + 185823 GTTT-G s panTro5.chr6 173575288 5 + 175400573 GTTT-G i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11491701 5 - 12463322 GTTT-G i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156320765 5 + 157873769 GTTC-C i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170345886 4 + 172585720 GTCC-- i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169091270 4 - 170955103 GTCC-- i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8377820 4 + 10161646 GTCC-- i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1409540 4 + 3144229 GTCC-- i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96696083 5 + 98384682 GCCTG- i chlSab2.chr13 C 0 I 10 s manLeu1.NW_012106474v1 8231991 4 - 10857215 GTCC-- i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15623611 4 - 23502949 GTCC-- i colAng1.NW_012114488v1 C 0 C 0 e otoGar3.GL873575 10958158 2272 - 12073884 I e saiBol1.JH378287 1307124 58 - 2905041 T e aotNan1.NW_018494782v1 1518368 0 - 1813869 C e cebCap1.NW_016107695v1 1269475 51 - 2164891 I e calJac3.chr4 169903393 67 + 171630274 T e dasNov3.JH569188 586080 63 + 760995 I e canFam3.chr1 56185527 1004 + 122678785 I e panPan2.chr6 171809030 38 + 173848474 I a score=19131.000000 s hg38.chr6_KB021644v2_alt 119118 7 + 185823 AGAACCG s panTro5.chr6 173575293 7 + 175400573 AGAACCG i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11491706 7 - 12463322 AGAACCG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156320770 7 + 157873769 AGAACCG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170345890 7 + 172585720 AGACCCT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169091274 7 - 170955103 AGACCCT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8377824 7 + 10161646 AGACCCT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1409544 7 + 3144229 AGACCCG i cerAty1.NW_012002071v1 C 0 C 0 s manLeu1.NW_012106474v1 8231995 7 - 10857215 AGACCCT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15623615 7 - 23502949 AGACTCG i colAng1.NW_012114488v1 C 0 C 0 e otoGar3.GL873575 10958158 2272 - 12073884 I e saiBol1.JH378287 1307124 58 - 2905041 T e aotNan1.NW_018494782v1 1518368 0 - 1813869 C e cebCap1.NW_016107695v1 1269475 51 - 2164891 I e calJac3.chr4 169903393 67 + 171630274 T e dasNov3.JH569188 586080 63 + 760995 I e canFam3.chr1 56185527 1004 + 122678785 I e chlSab2.chr13 96696088 10 + 98384682 I e panPan2.chr6 171809030 38 + 173848474 I a score=112091.000000 s hg38.chr6_KB021644v2_alt 119125 24 + 185823 CAGACCTGCAGGACTGTGCATGGC s panTro5.chr6 173575300 24 + 175400573 CAGACCTGCAGGACTGTGCATGGC i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11491713 24 - 12463322 CAGACCTGCAGGACTGTGCATGGC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156320777 24 + 157873769 CAGACCGGCAGGACTATGCATGGC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170345897 24 + 172585720 CAGACCTGCAGGACTGTGCACGGC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169091281 24 - 170955103 CAGACCTGCAGGACTGTGCACGGC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8377831 24 + 10161646 CAGACCTGCAGGACCGTGCACGGC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1409551 24 + 3144229 CAGACCTGCAGGACCGTGCACGGC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96696098 24 + 98384682 CAGACCTGCAAGACTGTGCACGGC i chlSab2.chr13 I 10 C 0 s manLeu1.NW_012106474v1 8232002 24 - 10857215 CAGACCTGCAGGACCATGCAAGAC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15623622 24 - 23502949 CAGACCTGCAGGACCGTGCATGGC i colAng1.NW_012114488v1 C 0 C 0 e otoGar3.GL873575 10958158 2272 - 12073884 I e saiBol1.JH378287 1307124 58 - 2905041 T e aotNan1.NW_018494782v1 1518368 0 - 1813869 C e cebCap1.NW_016107695v1 1269475 51 - 2164891 I e calJac3.chr4 169903393 67 + 171630274 T e dasNov3.JH569188 586080 63 + 760995 I e canFam3.chr1 56185527 1004 + 122678785 I e panPan2.chr6 171809030 38 + 173848474 I a score=34012.000000 s hg38.chr6_KB021644v2_alt 119149 7 + 185823 TCATTAG s panTro5.chr6 173575324 7 + 175400573 TCATTAG i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11491737 7 - 12463322 TCATTAG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156320801 7 + 157873769 TCATTAG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170345921 7 + 172585720 TCATCAG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169091305 7 - 170955103 TCATCAG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8377855 7 + 10161646 TCATCAG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1409575 7 + 3144229 TCATCAG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96696122 7 + 98384682 TCATCAG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8232026 7 - 10857215 TCATCAG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15623646 7 - 23502949 TCATCGG i colAng1.NW_012114488v1 C 0 C 0 s dasNov3.JH569188 586143 7 + 760995 TTATTAT i dasNov3.JH569188 I 63 C 0 e otoGar3.GL873575 10958158 2272 - 12073884 I e saiBol1.JH378287 1307124 58 - 2905041 T e aotNan1.NW_018494782v1 1518368 0 - 1813869 C e cebCap1.NW_016107695v1 1269475 51 - 2164891 I e calJac3.chr4 169903393 67 + 171630274 T e canFam3.chr1 56185527 1004 + 122678785 I e panPan2.chr6 171809030 38 + 173848474 I a score=66814.000000 s hg38.chr6_KB021644v2_alt 119156 11 + 185823 GCCGGGTCTGT s panTro5.chr6 173575331 11 + 175400573 GCCGGGTCTGT i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11491744 11 - 12463322 GCCGGGTCTGT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156320808 11 + 157873769 GCCGGGCCTGT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170345928 11 + 172585720 GCCGGGCCTGT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169091312 11 - 170955103 GCCGGGCCTGT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8377862 11 + 10161646 GCCGGGCCTGT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1409582 11 + 3144229 GCTGGGCCTGC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96696129 11 + 98384682 GCCGGGCCTGT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8232033 11 - 10857215 GCCAGGCCTGC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15623653 11 - 23502949 GCCGGGCCTGT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169903326 11 + 171630274 GCCAGGCCTGC i calJac3.chr4 T 67 C 0 s dasNov3.JH569188 586150 11 + 760995 GCCGAATCTAT i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10958158 2272 - 12073884 I e saiBol1.JH378287 1307124 58 - 2905041 T e aotNan1.NW_018494782v1 1518368 0 - 1813869 C e cebCap1.NW_016107695v1 1269475 51 - 2164891 I e canFam3.chr1 56185527 1004 + 122678785 I e panPan2.chr6 171809030 38 + 173848474 I a score=-20666.000000 s hg38.chr6_KB021644v2_alt 119167 13 + 185823 CCAGGG----------------------------------------------------------------------GGTCCAG s panTro5.chr6 173575342 13 + 175400573 CCAGGG----------------------------------------------------------------------GGTCCAG i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11491755 13 - 12463322 CCACGG----------------------------------------------------------------------GGTCCAG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156320819 13 + 157873769 CCAGGG----------------------------------------------------------------------GGTCCAG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170345939 79 + 172585720 CCAGGG----GTCCAGACCCTCAGACCTGCAGGACCGTGCATGGCTCATCAGGCCGGGCCTGTCTAGGGGTCCAGGCCCTCAG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169091323 20 - 170955103 CCAGGG----GTCCAGA-----------------------------------------------------------CCCTCAG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8377873 20 + 10161646 CCAGGG----GTCCAGA-----------------------------------------------------------CCCTCAG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1409593 24 + 3144229 CCGGGGGCCTGCCCGGA-----------------------------------------------------------GTTCCAG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96696140 20 + 98384682 CCAGGG----GTCCAGA-----------------------------------------------------------CCCTCAG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8232044 12 - 10857215 CCGGGG----TTC-------------------------------------------------------------------CAG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15623664 20 - 23502949 CCAGGG----GTCCAGA-----------------------------------------------------------CTCGCAG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169903337 11 + 171630274 --CGGG----------------------------------------------------------------------GTTCTAA i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1307066 13 - 2905041 CCGGGG----------------------------------------------------------------------GTTCTAG i saiBol1.JH378287 T 58 C 0 s dasNov3.JH569188 586161 1 + 760995 ------------------------------------------------------------------------------T---- i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10958158 2272 - 12073884 I e aotNan1.NW_018494782v1 1518368 0 - 1813869 C e cebCap1.NW_016107695v1 1269475 51 - 2164891 I e canFam3.chr1 56185527 1004 + 122678785 I e panPan2.chr6 171809030 38 + 173848474 I a score=223992.000000 s hg38.chr6_KB021644v2_alt 119180 42 + 185823 ACCTGCAGGAC---------------------------------------------------------------------CGTGCATGGCTCATCAGGCCGGGCCTGTCCA s panTro5.chr6 173575355 94 + 175400573 ACCTGCAGGACTGTGCATGGCTCATTAGGCCGGGTCTGTCCAGGGGGTCCAGACCTGCAGG-----------------ACCGTGCATGGCTCATCAGGCCGGGCCTGTCCA i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11491768 93 - 12463322 ACCTGCAGGACCGTGCATGGCTCATCAGGCCGGGCCTGCCC------------------GGGGTTCCAGACCTGCCGGACAGTGCATGGCTCATCAGGCCGGGCCTGTCCA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156320832 42 + 157873769 ACCTGCAGGAC---------------------------------------------------------------------CGAGCATGGCTCATCAGGCCGGGCCTGTCCA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170346018 42 + 172585720 ACCTGCAGGAC---------------------------------------------------------------------CGTGCATGGCTCATCAGGCCGGGCCTGTCCA i rheMac8.chr4 C 0 I 168 s macFas5.chr4 169091343 42 - 170955103 ACCTGCAGGAC---------------------------------------------------------------------CGTGCATGGCTCATCAGGCCGGGCCTGTCTA i macFas5.chr4 C 0 I 227 s macNem1.NW_012011000v1 8377893 42 + 10161646 ACCTGCAGGAC---------------------------------------------------------------------TGTGCACGGCTCATCAGGCCGGGCCTGTCTA i macNem1.NW_012011000v1 C 0 I 286 s cerAty1.NW_012002071v1 1409617 42 + 3144229 ACCTGCAGGAC---------------------------------------------------------------------CGTGCATGGCTCATCAGGCCGGGCCTGTCTA i cerAty1.NW_012002071v1 C 0 I 357 s chlSab2.chr13 96696160 42 + 98384682 ACCCGCAGGAC---------------------------------------------------------------------CGTGCATGGCTCATCAGGCCGGGCCTATCCA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8232056 33 - 10857215 ACCTGCCAGAC---------------------------------------------------------------------CGTGCATGGCTCATCAAGCCGG--------- i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15623684 42 - 23502949 ACCTGCAGGAC---------------------------------------------------------------------CGTGCATGGCTCATCGGGCCGGGCCTGTCCA i colAng1.NW_012114488v1 C 0 I 109 s calJac3.chr4 169903348 42 + 171630274 CCCAGACGGAC---------------------------------------------------------------------CCTGCAGGGCTCATCGGGCCGGGCCTGTCCA i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1307079 42 - 2905041 ATCTGCCGGAC---------------------------------------------------------------------CCTGCGTGGCTCATCAGGCCGGGCCTGTCCA i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1269526 42 - 2164891 ACCTGCCAGAC---------------------------------------------------------------------CCTGCATGGCTCATCAGGCCGGGCCTGTCCA i cebCap1.NW_016107695v1 I 51 C 0 s dasNov3.JH569188 586162 8 + 760995 ---TGAAAGAC---------------------------------------------------------------------------------------------------- i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10958158 2272 - 12073884 I e aotNan1.NW_018494782v1 1518368 0 - 1813869 C e canFam3.chr1 56185527 1004 + 122678785 I e panPan2.chr6 171809030 38 + 173848474 I a score=23400.000000 s hg38.chr6_KB021644v2_alt 119222 3 + 185823 GGG s panTro5.chr6 173575449 3 + 175400573 GGG i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11491861 3 - 12463322 GGG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156320874 3 + 157873769 GGG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170346228 3 + 172585720 GGG i rheMac8.chr4 I 168 C 0 s macFas5.chr4 169091612 3 - 170955103 GGG i macFas5.chr4 I 227 C 0 s macNem1.NW_012011000v1 8378221 3 + 10161646 GGG i macNem1.NW_012011000v1 I 286 C 0 s cerAty1.NW_012002071v1 1410016 3 + 3144229 GGG i cerAty1.NW_012002071v1 I 357 C 0 s chlSab2.chr13 96696202 3 + 98384682 GGG i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15623835 3 - 23502949 GGG i colAng1.NW_012114488v1 I 109 C 0 s calJac3.chr4 169903390 3 + 171630274 GGG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1307121 3 - 2905041 GGG i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1269568 3 - 2164891 GGG i cebCap1.NW_016107695v1 C 0 C 0 e otoGar3.GL873575 10958158 2272 - 12073884 I e aotNan1.NW_018494782v1 1518368 0 - 1813869 C e dasNov3.JH569188 586170 0 + 760995 C e canFam3.chr1 56185527 1004 + 122678785 I e manLeu1.NW_012106474v1 8232089 0 - 10857215 C e panPan2.chr6 171809030 38 + 173848474 I a score=4500.000000 s hg38.chr6_KB021644v2_alt 119225 1 + 185823 G s panTro5.chr6 173575452 1 + 175400573 G i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11491864 1 - 12463322 G i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156320877 1 + 157873769 G i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170346231 1 + 172585720 G i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169091615 1 - 170955103 G i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8378224 1 + 10161646 G i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1410019 1 + 3144229 G i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96696205 1 + 98384682 G i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15623838 1 - 23502949 G i colAng1.NW_012114488v1 C 0 C 0 e otoGar3.GL873575 10958158 2272 - 12073884 I e saiBol1.JH378287 1307124 0 - 2905041 C e aotNan1.NW_018494782v1 1518368 0 - 1813869 C e cebCap1.NW_016107695v1 1269571 0 - 2164891 C e calJac3.chr4 169903393 0 + 171630274 C e dasNov3.JH569188 586170 0 + 760995 C e canFam3.chr1 56185527 1004 + 122678785 I e manLeu1.NW_012106474v1 8232089 0 - 10857215 C e panPan2.chr6 171809030 38 + 173848474 I a score=804578.000000 s hg38.chr6_KB021644v2_alt 119226 127 + 185823 TTCCAGA----------------------------------------------------------------------------------------------------CCCGCGGGGACCTTGGCTCCATCAGGCGGGAACCGCCCCGCGGGATTCTGAAAGGATGAATGCATTT-TCCTCTTTCTAGCATGGAA----------------GGATTGTTAA--------------------TTATTTCTTCGTAGTTTTCTGTGC-------------- s panTro5.chr6 173575453 127 + 175400573 TTCCAGA----------------------------------------------------------------------------------------------------CCCGCGGGGACCTTGGCTCCATCAGGCGGGAACCGCCCCGCGGGATTCTGAAAGGATGAATGCATTT-TCCTCTTTCTAGCATGGAA----------------GGATTGTTAA--------------------TTATTTCTTCGTAGTTTTCTGTGC-------------- i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11491865 127 - 12463322 TTCCAGA----------------------------------------------------------------------------------------------------CCCGCGGGGACCTTGGCTCCATCAGGCGGGAACCGCCCCGCGGGATTCTGAAAGGATGAATGCATTT-TCCTCTTTCTAGCATGGAA----------------GGATTGTTAA--------------------TTATTTCTTCGTAGTTTTCTGTGC-------------- i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156320878 127 + 157873769 GTCCAGA----------------------------------------------------------------------------------------------------CCCGCGGGGACCCTGGCTCCATCAGGCGGGAACCGCCCCGCGGTATTCTGAAAGGATGAATGCATTT-TCCTCTTTCTAGCATGGAA----------------GGATTGTTAA--------------------TTATTTCTTCGTAGTTTTCTGTGC-------------- i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170346232 147 + 172585720 TTCCAGA----------------------------------------------------------------------------------------------------CCCACGGGGACCTTGACTCTATCAGGTGGGAACCGCCCCGCGGGGCTGGAAAAGGAAGAGTGCGTTT-TTCTCTTTCTAGCATGGAA----------------GGATTGTTAAATGGACGGATTGTTAATTATTTATTTCCTCGTAGTTTTCTGTGC-------------- i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169091616 147 - 170955103 TTCCAGA----------------------------------------------------------------------------------------------------CCCACGGGGACCTTGACTCTATCAGGTGGGAACCGCCCCGCGGGGCTGGAAAAGGAAGAGTGCGTTT-TTCTCTTTCTAGCATGGAA----------------GGATTGTTAAATGGACGGATTGTTAATTATTTATTTCCTCACAGTTTTCTGTGC-------------- i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8378225 147 + 10161646 TTCCAGA----------------------------------------------------------------------------------------------------CCCACGGGGACCTTGACTCTATCAGGTGGGAACCGCCCCGTGGGGCTGGAAAAGGAAGAGTGCGTTT-TTCTCTTTCTAGCATGGAA----------------GGATTGTTAAATGGACGGATTGTTAATTATTTATTTCCTCATAGTTTTCTGTGC-------------- i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1410020 147 + 3144229 TTCCAGA----------------------------------------------------------------------------------------------------CCCACGGGGACCTTGACTCCATCAGGCGGGAACCGCCCCGCGGGGTTGGGAAAGGAAGAATGCGTTT-TTCTCTTTCTAGCATGGAA----------------GGATTGTTAAATGGACGGATTGTTAATTATTTATTTCCTCGTAGTTTTCTGTGC-------------- i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96696206 247 + 98384682 TTCCAGACCCGCAGACCTGCAGGACCATGCAACACTCATCAGGCCAGGCCTGCCCGGGGTTCCAGACCTGCCAGACTGTGCATGGCTCATCAAGCGGCGCCTGCACGCCCGCGGGGACCTTAACTCCATCAGGCGGGAACCGCCCTGCGGGGTTGGGAAAGGAACAATGCGTTT-TTCTCTTTCTAGCATGGAA----------------GGATTGTTAAATGGATGGATAGTTAATTATTTATTTCTTCGTAGTTTTCTGTGC-------------- i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8232089 165 - 10857215 --------------------------------------------------------------------------------------------------GCCTGCACGCCCGCGGGGACCTTGACTCCATCAGGCGGGAACCGCCCCGTGGGGTTGGGAAAGGAAGAATGCGTTT-TTCTCTTTCTAGCATGGAAGGATTGTTAAATGGACGGATTGTTAAATGGACGGATTGTTAATTATTTATTTCTTCATAGTTTTCTGTGC-------------- i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15623839 147 - 23502949 TTCCAGA----------------------------------------------------------------------------------------------------CCCGCGGGGACCTTGACTCCACCAGGCGGGAACCGCCCCGTGGGGTTGGGAAAGGAAGAATGTGTTT-TTCTCTTTCTAGCATGGAA----------------GGATTGTTACATGGACGGATTGTTAATGATTTATTTCTTCGTAGTTTTCTGTGC-------------- i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169903393 127 + 171630274 TTCCAGA----------------------------------------------------------------------------------------------------CCCGCGGGGCCCGTGGCTCCGTCTGGTGGGGTCTGCCCTGGGGAATTCTGAATGGACGACTGCATTTTTTCTCTTTCTGACAT-GAA----------------GGATTGTTAA--------------------TCATTTCTTGGTAGTTTTCTGTGC-------------- i calJac3.chr4 C 0 I 1 s saiBol1.JH378287 1307124 92 - 2905041 TTCCAGA----------------------------------------------------------------------------------------------------CCCGCAGGCCCCGTGGCTCCATCAGCTGGGGTCTGCCCTGGGGGATTCTGAATGGATGACTGCATTTCTTC------------------------------------------------------------------------GTAGTTTTCTGTGC-------------- i saiBol1.JH378287 C 0 I 1 s cebCap1.NW_016107695v1 1269571 126 - 2164891 TTCCAGA----------------------------------------------------------------------------------------------------CCCACAGGGCCCATGGCTCCATCAGGTGGGGTCTGCCCTGGGGGATTCTGAATGGATGACTCTATTT-TTCTCTTTCTGGCAT-GAA----------------GGATTGTTAA--------------------TCATTTCTTTGTAGTTTTCTGTGC-------------- i cebCap1.NW_016107695v1 C 0 I 1 s aotNan1.NW_018494782v1 1518368 126 - 1813869 TTCCAGA----------------------------------------------------------------------------------------------------CCCGCGGGGCCCGTGGCTGCATCAGGTGGGGTCTGCCCTGGGGGATTCTGAATGGATGACTGCATTT-TTCTCTTCCTGGCAT-GAA----------------GGATTGTTAA--------------------TCATTTCTTCGTAGTTTTCTGTGC-------------- i aotNan1.NW_018494782v1 C 0 C 0 s dasNov3.JH569188 586170 88 + 760995 --------------------------------------------------------------------------------------------------------------------------------------------------------TTTTAAAAGGAA-AATGAATTT-TGCCTTCTTTTTGGTCGGA----------------GGACTGTTAA--------------------TTGCTTATTTACTGTTCTCTTTGTCATACTCCCAGAGC i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10958158 2272 - 12073884 I e canFam3.chr1 56185527 1004 + 122678785 I e panPan2.chr6 171809030 38 + 173848474 I a score=12326.000000 s hg38.chr6_KB021644v2_alt 119353 5 + 185823 TTCCC s panTro5.chr6 173575580 5 + 175400573 TTCCC i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11491992 5 - 12463322 TTCCC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156321005 5 + 157873769 TTCCC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170346379 5 + 172585720 TTCCG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169091763 5 - 170955103 TTCCG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8378372 5 + 10161646 TTCCG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1410167 5 + 3144229 TTCCG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96696453 5 + 98384682 TTCTG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8232254 5 - 10857215 TTCCG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15623986 5 - 23502949 TTCCA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169903521 4 + 171630274 TTTC- i calJac3.chr4 I 1 C 0 s saiBol1.JH378287 1307217 4 - 2905041 TCTC- i saiBol1.JH378287 I 1 C 0 s cebCap1.NW_016107695v1 1269698 4 - 2164891 TTCC- i cebCap1.NW_016107695v1 I 1 C 0 s dasNov3.JH569188 586258 5 + 760995 TTCAT i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10958158 2272 - 12073884 I e aotNan1.NW_018494782v1 1518494 0 - 1813869 C e canFam3.chr1 56185527 1004 + 122678785 I e panPan2.chr6 171809030 38 + 173848474 I a score=1351010.000000 s hg38.chr6_KB021644v2_alt 119358 170 + 185823 TTTCTCCTTTTTGCCTCACCTGCTCTTTCCTCCTGAATCCTGAGTGATTTGGGTAAAGCCAATGGTCGGATTACCTGGGAAGAAGCTGGGAAGCCAAATGTATGAAGAGCGGGGCTTCAGATAGGGGCCACGGAGAGCCCAGGCCCAGGAGGCCT-----------------------GCAGAGCCTGGGAGG s panTro5.chr6 173575585 170 + 175400573 TTTCTCCTTTTTGCCTCACCTGCTCTTTCCTCCTGAATCCTGAGTGATTTGGGTAAAGCCAATGGTCGGATTACCTGGGAAGAAGCTGGGAAGCCAAATGTATGAAGAGCGGGGCTTCAGATAGGGGCCACGGAGAGCCCAGGCCCAGGAGGCCT-----------------------GCAGAGCCTGGGAGG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171809068 170 + 173848474 TTTCTCCTTTTTGCCTCACCTGCTCTTTCCTCCTGAATCCTGAGTGATTTGGGTAAAGCCAATGGTCGGATTACCTGGGAAGAAGCTGGGAAGCCAAATGTATGAAGAGCGGGGCTTCAGATAGGGGCCACGGAGAGCCCAGGCCCAGGAGGCCT-----------------------GCAGAGCCTGGGAGG i panPan2.chr6 I 38 C 0 s gorGor5.CYUI01015032v1 11491997 169 - 12463322 TTTCTCCTTTTTGCCTCACC-GCTCTTTCCTCCTGAATCCTGAGTGATTTGGGTAAAGCCAATGGTCGGATTACCTGGGAAGAAGCTGGGAAGCCAAATGTATGAAGAGCGGGGGTTCAGATAGGGGCCACGGAGAGCCCAGGCCCAGGAGGCCT-----------------------GCAGAGCCTGGGAGG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156321010 170 + 157873769 TTTCTCCTTTTTGCCTCACCTGCTCTTTCCTCCTGAATCCTGAGTGATTTGGGTAAAGCCAATGGTCAGATTACCTGGGAGGAAGCTGAGAAGCCAAATGTATGAAGAGCGGGGGTTCGGATAGGGGCCACGGAGAGCCCAGGCTCAGGAGCCCT-----------------------ACAGAGCCTGGGAGG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170346384 169 + 172585720 TTTCTCCTTTTTGCCTCACCTGCTCTTTCCTCCTGAATCCTGA-TGATTTGGGTAAAACCAGTGGTGAGGTTACCTGGGAAGAAGCTGGGAAGCCGAATGTATGAAGAGCGGGGGTTCGGGTGGGGGCCATGGAGAGCCCAGGCCCGGGAGACCT-----------------------GCAGAGCCTGGGAGG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169091768 169 - 170955103 TTTCTCCTTTTTGCCTCACCTGCTCTTTCCTCCTGAATCCTGA-TGATTTGGGTAAAACCAATGGTGAGGTTACCTGGGAAGAAGCTGGGAAGCCGAATGTATGAAGAGCGGGGGTTCGGGTGGGGGCCATGGAGAGCCCAGGCCCGGGAGGCCT-----------------------GCAGAGCCTGGGAGG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8378377 169 + 10161646 TTTCTCCTTTTTGCCTCACCTGCTCTTTCCTCCTGAATCCTGA-TGATTTGGGTAAAACCAATGGTGAGGTTACCTGGGAAGAAGCTGGGAAGCCGAATGTATGAAGAGCGGGGGTTCGGGTGGGGGCCATGGAGAGCCCAGGCCCGGGAGGCCT-----------------------GCAGAGCCTGGGAGG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1410172 169 + 3144229 TTTCTCCTTTTTGCCTCACCTGCTCTTTCCTCCTGAATCCTGA-TGATTTGGGTAAAACCAGTGGTGAGGTTACCTGGGAAGAAGCTGGGAAGCCGAATGTATGAAGAGCGGGGGTTCGGGTGGGGGCCATGGAAAGCCCAGGCCCAGGAGGCCT-----------------------GCAGAGCCTGGGAGG i cerAty1.NW_012002071v1 C 0 I 18 s chlSab2.chr13 96696458 169 + 98384682 TTTCTCCTTTTTGCCTCACCTGCTCTTTCCTCCTGAATCCTGA-TGATTTGGGTAAAACCAAGGGTGAGGTTACCTGGGAAAAAGCTGGGAAGCCGAATGTATGAAGAGCGGGGGTTCGGGCGGGGGCCATGGAGAGCCCAGGCCCGGAAGGCCT-----------------------GCAGAGCCTGGGAGG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8232259 192 - 10857215 TTTCTCCTTTTTGTCTCACCTGCTCTTTCCTCCTGAATCCTGA-TGATTTGGGTAAAACCAATGGTGAGGTTACCTGGGAAGAAGCTGGGAAGCCGAATGTGTGAAGAGCGGGGGTTCGGGTGGGGGCCATGGAGAACTCAGGCCCAGGAGGCCTGCAGAGCCTAGGAGGCTCACCAAGCAGAGCCTGGGAGG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15623991 168 - 23502949 TTTCTCCTTTTTGCCTCACCTGCTCTTTCCTCCTGAATCCTGA-TGATTTGGGTAAAACCAATGGTGAGATTACCTGGGAAGAAGCTGGGAAGCCGAATGTATGAAGAGCGGGGGTTCGGGTGGGGGCCGTGGAGAGCCCAGGCCCAGGAGG-CT-----------------------GCAGAGCCTGGGAGG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169903525 154 + 171630274 TCTCTCCTTTTCCCCACACCTGCTCTTTCCTCCTGAATCCTGAGTGATTTGGGTAAAGCCAGTGGGCGGATTACCTGGGAAGAAGCTGTGAACACAAACA---------------TTCGGGTGGGAGCCGCAGAGAGCCCAGGC-CAGGAGGCCT-----------------------GCAGAGCCTGTGGGG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1307221 154 - 2905041 TGTCTCCTTTTTCCCTCACCTGCTCTTTCCTCCTCAACCCTGAGTGATTTGGGTAAAGACAGTGGTCGGATTACCTGGGAAGAAGCCGTGAAGCCAAACG---------------TTCGGGTGGGGGCCGCAGAGAGCCCAGGC-CAGGAGGCCT-----------------------GCAGAGCCTGGGGGG i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1269702 154 - 2164891 TTTCTCCTTTTTCCCTCACCTGCTCTTTCCTCCTGAATCCTGAGTGATTTGGGTAAAGCCAGTGGTTGGATTACCTGGGAAGAAGCCGTGAAGCCAAACG---------------TTCGGGCGGGAGCCACAGAGAGCCCAGGC-CAGGAGGCCT-----------------------GCAGAGCCTCGGGGG i cebCap1.NW_016107695v1 C 0 C 0 s dasNov3.JH569188 586263 107 + 760995 TTTGCCCTTTTTGCCTTGTTCAAGCTTT-CTTCTGCCTCTTTAGGGCTTGGTATGACGTCTGCAGTCAGATCACCTGCTAAGGAGTTGCTGAACCAATTGTCTCAAGA------------------------------------------------------------------------------------- i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10958158 2272 - 12073884 I e aotNan1.NW_018494782v1 1518494 0 - 1813869 C e canFam3.chr1 56185527 1004 + 122678785 I a score=147480.000000 s hg38.chr6_KB021644v2_alt 119528 32 + 185823 AGGGAGGCTCACCCAGCCCGGGGCCTGGCCCC s panTro5.chr6 173575755 32 + 175400573 AGGGAGGCTCACCCAGCCCGGGGCCTGGCCCC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171809238 13 + 173848474 AGGGAGGCTCACC------------------- i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11492166 32 - 12463322 AGGGAGGCTCACCCAGCCCGGGGCCTGGCCCC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156321180 13 + 157873769 AGGGAGGCTCACC------------------- i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170346553 32 + 172585720 AGGGAGGCTCACCCAGTGCAGAGCCTGGCCCC i rheMac8.chr4 C 0 I 165 s macFas5.chr4 169091937 32 - 170955103 AGGGAGGCTCACCCAGTGCAGAGCCTGGCCCC i macFas5.chr4 C 0 I 55 s macNem1.NW_012011000v1 8378546 32 + 10161646 AGGGAGGCTCACCCAGTGCAGAGCCTGGCCCC i macNem1.NW_012011000v1 C 0 I 55 s chlSab2.chr13 96696627 32 + 98384682 AGAGAGGCTCACCCAGTGCAGGGCCTGGCCCC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8232451 32 - 10857215 AGGGAGGCTCACCCAGTGCAGGGCCTGGCCCC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15624159 32 - 23502949 AGGGAGGCTCACCCAGTGCAAGGCCTGGCCCC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169903679 32 + 171630274 AGGGAGGCTTGCCCTGCACTGGCCCTGGCTCC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1307375 32 - 2905041 AGGGAGGCTTGCCCTGCACTGGCTCTGGCTCC i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1269856 32 - 2164891 AGGGAGGCTTGCCCTGCACTGGCTCTGGCTCC i cebCap1.NW_016107695v1 C 0 C 0 s dasNov3.JH569188 586370 4 + 760995 ---------CAAC------------------- i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10958158 2272 - 12073884 I e aotNan1.NW_018494782v1 1518494 0 - 1813869 C e canFam3.chr1 56185527 1004 + 122678785 I e cerAty1.NW_012002071v1 1410341 18 + 3144229 I a score=273.000000 s hg38.chr6_KB021644v2_alt 119560 1 + 185823 A s panTro5.chr6 173575787 1 + 175400573 A i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11492198 1 - 12463322 A i gorGor5.CYUI01015032v1 C 0 C 0 e otoGar3.GL873575 10958158 2272 - 12073884 I e saiBol1.JH378287 1307407 0 - 2905041 C e aotNan1.NW_018494782v1 1518494 0 - 1813869 C e cebCap1.NW_016107695v1 1269888 0 - 2164891 C e calJac3.chr4 169903711 0 + 171630274 C e dasNov3.JH569188 586374 0 + 760995 C e colAng1.NW_012114488v1 15624191 0 - 23502949 C e canFam3.chr1 56185527 1004 + 122678785 I e chlSab2.chr13 96696659 0 + 98384682 C e cerAty1.NW_012002071v1 1410341 18 + 3144229 I e nomLeu3.chr3 156321193 0 + 157873769 C e manLeu1.NW_012106474v1 8232483 0 - 10857215 C e macNem1.NW_012011000v1 8378578 55 + 10161646 I e rheMac8.chr4 170346585 165 + 172585720 I e macFas5.chr4 169091969 55 - 170955103 I e panPan2.chr6 171809251 0 + 173848474 C a score=45575.000000 s hg38.chr6_KB021644v2_alt 119561 19 + 185823 TGGGGGTCC---TGCTGCAGAG s panTro5.chr6 173575788 19 + 175400573 TGGGGGTCC---TCCTGCAGAG i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11492199 19 - 12463322 TGGGGGTCC---TCCTGCAGAG i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170346750 19 + 172585720 TGGGGGTCC---TCCTACAGAG i rheMac8.chr4 I 165 C 0 s macFas5.chr4 169092024 19 - 170955103 TGGGGGTCC---TCTTACAGAG i macFas5.chr4 I 55 C 0 s macNem1.NW_012011000v1 8378633 19 + 10161646 TGGGGGTCC---TCCTGCAGAG i macNem1.NW_012011000v1 I 55 C 0 s chlSab2.chr13 96696659 19 + 98384682 TGGGGGTCC---TCCTACAGAG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8232483 19 - 10857215 TCGGGGTCC---TCCTACAGAG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15624191 19 - 23502949 TGGGGGTCC---TCCTACAGAG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169903711 12 + 171630274 TGAGGGCCCCAG---------- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1307407 9 - 2905041 GGAGGGCCC------------- i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1269888 9 - 2164891 TGAGGGCCC------------- i cebCap1.NW_016107695v1 C 0 C 0 s dasNov3.JH569188 586374 13 + 760995 ----AATTC---CGCTGGAG-- i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10958158 2272 - 12073884 I e aotNan1.NW_018494782v1 1518494 0 - 1813869 C e canFam3.chr1 56185527 1004 + 122678785 I e cerAty1.NW_012002071v1 1410341 18 + 3144229 I e nomLeu3.chr3 156321193 0 + 157873769 C e panPan2.chr6 171809251 0 + 173848474 C a score=961644.000000 s hg38.chr6_KB021644v2_alt 119580 165 + 185823 GAGGAGGGAGGCTCACCCAGCGCTGGGCCTGGCCCC--------------------------------------------------------TGGTGGTCCTCCTGCAGATGTAGCCGTGAGGGCTGCTGACCCC--------------CTCCAACTTCACCGCCTCTCCTGAATCCCAGGCCATCCC--AGCCTC----GTCTGGCGGTGTGAAGAGTGGATCTGAATTCCAAAGATCTG s panTro5.chr6 173575807 166 + 175400573 GAGGAGGGAGGCTCACCCAGCGCTGGGCCTGGCCCCA-------------------------------------------------------TGGGGGTCCTCCTGCAGATGTAGCCGTGAGGGCTGCTGACCCC--------------CTCCAACTTCACCGCCTCTCCTGAATCCCAGGCCATCCC--AGCCTC----GTCTGGCGGTGTGAAGAGTGGATCTGAATTCCAAAGATCTG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171809251 149 + 173848474 -----------------CAGCGCTGGGCCTGGCCCCA-------------------------------------------------------TGGGGGTCCTCCTGCAGATGTAGCCGTGAGGGCTGCTGACCCC--------------CTCCAACTTCACCGCCTCTCCTGAATCCCAGGCCATCCC--AGCCTC----GTCTGGCGGTGTGAAGAGTGGATCTGAATTCCAAAGATCTG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11492218 220 - 12463322 GAGGAGGGAGGCTCACCCAGTGCTGGGCCTGGCCCCATGGGGGTCCTCCTGCAGAGGAGGAGGCAGGTTCACCCAGCGCTGGGCCTGGCCCCTGGTGGTCCTCCTGCAGATGTAGCC-TGAGGGCTGCTGACCCC--------------CTCCAACTTCACCGCCTCTCCTGAATCCCAGGCCATCCC--AGCCTC----GTCTGGCGGTGTGAAGAGTGGATCTGAATTCCAAAGATCTG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156321193 149 + 157873769 -----------------CAGCCCTGGGCCTGGCCCC--------------------------------------------------------TGGGGGTCCTCCTGCAGATGTAGCCGTGAGGGCTGCTGA-CCC--------------CTCCAACTTCACCGAATCTCCTGAATCCCAGGCCATCCCATAGCCTC----GTCCGGCCGTGTGAAGCGTGGATCTGAATTCCAAAGATCTG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170346769 170 + 172585720 GAGGAGGGAGGCTCACCCAGTGCTGGACCTGGTGCC--------------------------------------------------------TGGGGGTCCTCCTGCAGATGTAGCCATGAGGGCTGCTGGCCCCTCCAC---------CCCCAACTTCACTGTCACTCCTGAATCCCGGGCCATCCC--AGCCTC----ATCTGGCCGTGTGAACAGTAGATCTGAATTCCAAAGATCTG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169092043 170 - 170955103 GAGGAGGGAGGCTCACCCAGTGCAGGGCCTGGCCCC--------------------------------------------------------TGGGGGTCCTCCTGCAGATGTAGCCATGAGGGCTGCTGGCCCCTCCAC---------CCCCAACTTCACTGTCACTCCTGAATCCCAGGCCATCCC--AGCCTC----GTCTGGCCGTGTGAACAGTAGATCTGAATTCCAAAGATCTG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8378652 170 + 10161646 GAGGAGGGAGGCTCACCCAGTGCTGGACCTGGTGCC--------------------------------------------------------TGGGGGTCCTCCTGCAGATGTAGCCATGAGGGCTGCTGGCCCCTCCAC---------CCCCAACTTCACTGTCACTCCTGAATCCCAGGCCATCCC--AGCCTC----GTCTGGCCGTGTGAACAGTAGATCTGAATTCCAAAGATCTG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1410359 169 + 3144229 GAGGAGGGAGGCTCACCCAGTGCCGGCCCCGGCCCC--------------------------------------------------------TGGGGATCCTCCTGCAGATGTAGCCATGAGGGCTGCTGACCCC-CCAC---------CCCCAACTTCACTGTCTGTCCTGAATCCCAGGCCATCCC--AGCCTC----GTCTGGCCGTGTGAACAGTAGATCTGAATTCCAAAGATCTG i cerAty1.NW_012002071v1 I 18 C 0 s chlSab2.chr13 96696678 170 + 98384682 GAGGAGGGAGGTTCACCCAGTGCTGGACCCGGTGCC--------------------------------------------------------TGGGGGTCCTCCTGCAGATGTAGCCATGAGGGCTGCTGGCCCCTCCAC---------CCCCAACTTCACTGTCACTCCTGAATCCCAGGTCATCCC--AGCCTC----ATCTCGTCATGTGAACAGCAGATCTGAATTCCAAAGATCTG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8232502 169 - 10857215 GAGGAGGGAGGCTCACCCAGTGCCGGACCCGGCCCC--------------------------------------------------------TGGGGATCCTCCTGCAGATGTACCCATGAGGGCTGCTGACCCC-CCAC---------CCCCAACTTCACTGTCTCTCCTGAATCCCAGGCCATCCC--AGCCTC----GTCTGGCCGTGTGAACAGTAGATCTGAATTCCAAAGATCTG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15624210 178 - 23502949 GAGGAGGGAGGCTCACCCAGTGCTGGACCTGGCCCC--------------------------------------------------------TGGGGGTCCTCCTGCAGATGTAGCCATGAGGGCTGCTGACCCC-CCACCCGCAACTTCCCCAGCTTCACTGTCTTTCCTGAATCCCAGGCCATCCC--AGCCTC----GTCTGGCCGTGTGAACAGTAGATCTGAATTCCAAAGATCTG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169903723 121 + 171630274 ---GGTGGGG----------------------------------------------------------------------------------GGGGTGTCCTCCTGCAGATGTGGCTCTGAGGGCT-CTGACT----------------CCCTCACTT--CAGTCTCCCCTGAATCCCAGGCCAGTCT--GACCTC----GCCTGGC----------CTCGATCCGAATCCCAGGTATGTG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1307416 123 - 2905041 ----GGGGAG----------------------------------------------------------------------------------GAGGGGTTGTCCTGCAGATGTGGCTTTGAGGGCT-CTGACTC---------------CCCCCACTTCACAGTCTCTCCTGAATCCCAGGCCAGCCT--GGCATC----GCCCGGC----------GTGGATCTGAATTCCAGGTAGCTG i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1269897 123 - 2164891 ----CGGGGG----------------------------------------------------------------------------------GAGGGGGTGTCCTGCAGATGTGGCTCTGAGGGCT-CTGACTC---------------CCCCCACTTCACAGTCTCCCCTGAATCCCAGGCCAGCCT--GGCCTC----GCCCGGC----------GTGGATCTGAATTCCAGGTATCTG i cebCap1.NW_016107695v1 C 0 C 0 s dasNov3.JH569188 586387 107 + 760995 AAGAATTGAGGAGAACCCA-------------------------------------------------------------------------TGGA-----------------------AAAGTTTCCTGAACCT--------------CT-------------------TTAATCCTAAACCATCGT--GAACCCAGGAGTCtaaa---aaaaagggtggatgtaaagttggtacatctg i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10958158 2272 - 12073884 I e aotNan1.NW_018494782v1 1518494 0 - 1813869 C e canFam3.chr1 56185527 1004 + 122678785 I a score=648820.000000 s hg38.chr6_KB021644v2_alt 119745 76 + 185823 GGTCTTGCTCTGACTTTCCCCATTTGCTGCAGTTTGAGGAAGTAACGAATTATTTTGGAATCTTCATGTGTGTACA s panTro5.chr6 173575973 76 + 175400573 GGTCTTGCTCTGACTTTCCCCATTTGCTGCAGTTTGAGGAAGTAACGAATTATTTTGGCATCTTCATGTGTGTACA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171809400 76 + 173848474 GGTCTTGCTCTGACTTTCCCCATTTGCTGCAGTTTGAGGAAGTAACGAATTATTTTGGAATCTTCATGTGTGTACA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11492438 76 - 12463322 GGTCTTGCTCTGACTTTCCCCATTTGCTGCAGTTTGAGGAAGTAACGAATTATTTGGGAATCTTCATTTGTGTACA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156321342 76 + 157873769 GGTCTTGCTCTGACTTTCCCCATTTGCTGCAGTTTGAGGAAGTAATGAATTATTTTGGAATCTTCGTGTGTGTACA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170346939 76 + 172585720 GGTCTTGCTCTGACTTTCCCCATTTGCTGCAGTTTGAGGAAGTAAATAATTCTGTTGGAACCTTCATGTGTGTACA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169092213 76 - 170955103 GGTCTTGCTCTGACTTTCCCCATTTGCTGCAGTTTGAGGAAGTAAAGAATTCTGTTGGAACCTTCATGTGTGTACA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8378822 76 + 10161646 GGTCTTGCTCTGACTTTCCCCATTTGCTGCAGTTTGAGGAAGTAAAGAATTCTTTTGGAACCTTCATGTGTGTACA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1410528 75 + 3144229 GGTCTTGCTCTGACTTTCCCCATTTGCTGCAGTTTGAGGAAGTAACG-ATTCTTTTGGAACCTTCATGTGTGTACA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96696848 76 + 98384682 GGTCTTGCTCTGACTTCCCCCATTTGCTGCAGTTTGAGGAAGTAACGAATTCTTTTGGAACTTTCATGTGTGTACA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8232671 75 - 10857215 GGTCTTGCTCTGACTTTCCCCATTTGCTGCAGTTTGAGGAAGTAACG-ATTCTTTTGGAACCTTCATGTGTGTACA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15624388 75 - 23502949 AG-CTTGCTCTGACTTTCCCCATTTGCTGCAGTTTGAGGAAGTAACGAATTCTTTTGGAACCTTCATGTGTGTACA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169903844 75 + 171630274 -GTCTTGCTCTGCTGTTCCCCATTGGCTGCGGTTTGGGGAAGTAACAGATTCTTTTGGAATCTTCGTGTATGTGTG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1307539 75 - 2905041 -GTCTTGCTCTGACTTTCCCTATTTGCTGCAGTTTGGGGAAGTAACAGATTCTTTTGGAATCTTCATATATGTGTG i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1270020 75 - 2164891 -GTCTTGCTCTGACTTTCCCCATTTGCTGCAGTTTGGGGAAGTAACAGATTCTTTTGGAATCTTCATGTATGTGTG i cebCap1.NW_016107695v1 C 0 C 0 s canFam3.chr1 56186531 60 + 122678785 GGACTTGCGCTTATTCTCTTCCCTTGCAG-AGACTGAGAGGGGAAC---TGCCTCTGAATTCTG------------ i canFam3.chr1 I 1004 C 0 s dasNov3.JH569188 586494 64 + 760995 gctcctagtct---tttcttcacttgccgagatttgggaaaggcacatactctttttgaatcatcac--------- i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10958158 2272 - 12073884 I e aotNan1.NW_018494782v1 1518494 0 - 1813869 C a score=76936.000000 s hg38.chr6_KB021644v2_alt 119821 7 + 185823 TTTTAAT s panTro5.chr6 173576049 7 + 175400573 TTTTAAT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171809476 7 + 173848474 TTTTAAT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11492514 7 - 12463322 TTTTAAT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156321418 7 + 157873769 TTTTAAT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170347015 7 + 172585720 TTTTAAT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169092289 7 - 170955103 TTTTAAT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8378898 7 + 10161646 TTTTAAT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1410603 7 + 3144229 TTTTAAT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96696924 7 + 98384682 TTTTAAT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8232746 7 - 10857215 TTTTAAT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15624463 7 - 23502949 TTTTAAT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169903919 7 + 171630274 TTTTGAT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1307614 7 - 2905041 TTTTGAT i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1270095 7 - 2164891 TTCTGAT i cebCap1.NW_016107695v1 C 0 C 0 s otoGar3.GL873575 10960430 7 - 12073884 TTTTAAT i otoGar3.GL873575 I 2272 C 0 s canFam3.chr1 56186591 7 + 122678785 TATTAAA i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 586558 7 + 760995 ctttatt i dasNov3.JH569188 C 0 C 0 e aotNan1.NW_018494782v1 1518494 0 - 1813869 C a score=2122580.000000 s hg38.chr6_KB021644v2_alt 119828 258 + 185823 TTTTAAAATAAGGGTAAAAAAATTCCACCATTGCAGGTGAC--T---GAA-----AGTGAGGAGGGAGAGCTTGTGT----GGA--------AGGACATGAAAAA---------TTGCTCTC-------GGAGCCAACAACTGCT-GCTCCCTTCTC---------CCTGCACCCTCTAGACAGGCGCTGTTCCTG---ACCCTGTGAAGAGGCAGCGTCATGCGGGGCGATGGGAACACAGAGACTGCAGCATGGACAGACGTTTGTGTTGCAAGCAGAC---ACACA-------CCTCCAGGG-TAAATGTTTATTCC s panTro5.chr6 173576056 257 + 175400573 TTTTAAAATAAGGGTAAAAAAATTCCACCATTGCAGGTGAC--T---GAA-----AGTGAGGAGGGAGAGCTTGTGT----GGA--------AGGACGTGAAAAA---------TTGCTCTC-------GGAGCCAACAACTGCT-GCTCCCTTCTC---------CCTGCACCCTCTAGACAGGCGCTGTTCCTG---ACCCTGTGAAGAGGCAGCGTCATGCGGGGCGATGGGA-CACAGAGACTGCAGCATGGACAGACGTTTGTGTTGCAAGCAGAC---ACACA-------CCTCCAGGG-TAAATGTTTATTCC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171809483 257 + 173848474 TTTTAAAATAAGGGTAAAAAAATTCCACCTTTGCAGGTGAC--T---GAA-----AGTGAGGAGGGAGAGCTTGTGT----GGA--------AGGACATGAAAAA---------TTGCTCTC-------GGAGCCAACAACTGCT-GCTGCCTTCTC---------CCTGCACCCTCTAGACAGGCGCTGTTCCTG---ACCCTGTGAAGAGGCAGCGTCATGCGGGGCGATGGGA-CACAGAGACTGCAGCATGGACAGACGTTTGTGTTGCAAGCAGAC---ACACA-------CCTCCAGGG-TAAATGTTTATTCC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11492521 259 - 12463322 TTTTAAAATGAGGGT-AAAATATTCCATCATTGAAGGTGACTGT---GAA-----AGTGAGGAGGGAGAGCTTGTGT----GGA--------AGGACATCAAAAA---------TTGCTCTC-------GGAGCCAACAACTGCT-GCTCCCTTCTC---------CCTGCACCCTCTAGACAGGCGCTGTTCCTG---ACCCTGTGAAGAGGCAGCGTCATGCGGGGCGATGGGAACACAGAGACTGCAGCATGGACAGACGTTTGTGTTGCAAGCAGAC---ACACA-------CCTCCAGGG-TAAATGTTTATTCC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156321425 259 + 157873769 TTTAAAAATAAGGGTATAAAAATTCCACCATTGCAGGTGACTGT---GAA-----AGCGAGGAGGGAGAGCTTGTGT----GGA--------AGGACATGAAAAA---------TTGCTCTC-------AGAGCCAACAACTGTT--CTTCCTTCTC---------CCTGCACCCTCTAGACAGGCGCTGTTCCTC---ACCCTGTGAAGAGGCAGCGTCATGCGGGGTAATGGGAACATAGAGACTGCAGCATGGACAGACGTTTGTGCTGCAAGCAGAC---ACACA-------CCTCCAGGG-TAAATGTTTATTCC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170347022 260 + 172585720 TTTTAAAATAAGGGTAAAAACATTCCACCACTGCAGGTGACTGT---GAA-----AATGAGGAGGGAGAGCTT-TGT----GGA--------AGGACACGGAAAA---------TTGCTCTT-------AGAGCCAACAACTGCT-GCTTCCTTCTC---------CCTGCACCCTTCAGACAGGCGCCGTTCCCGTCCACCCCATGAAGAGGCAGCATCATGCCGGGCGATGGGA--ACAGAGACTGCAGCGCGGACAGACGTTTGTGTTGCAAGCAAAC---ACACA-------CCTCCAGGG-TAAATGTTTATTCC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169092296 260 - 170955103 TTTTAAAATAAGGGTAAAAACATTCCACCACTGCAGGTGACTGT---GAA-----AATGAGGAGGGAGAGCTT-TGT----GGA--------AGGACACGGAAAA---------TTGCTCTT-------AGAGCCAACAACTGCT-GCTTCCTTCTC---------CCTGCACCCTTCAGACAGGCGCCGTTCCCGTCGACCCCATGAAGAGGCAGCATCATGCCGGGCGATGGGA--ACAGAGACTGCAGCGCGGACAGACGTTTGTGTTGCAAGCAAAC---ACACA-------CCTCCAGGG-TAAATGTTTATTCC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8378905 260 + 10161646 TTTTAAAATAAGGGTAAAAACATTCCACCACTGTAGGTGACTGT---GAA-----AATGAGGAGGGAGAGCTT-TGT----GGA--------AGGACACGGAAAA---------TTGCTCTT-------AGAGCCAACAACTGCT-GCTTCCTTCTC---------CCTGCACCCTTCAGACAGGCGCCGTTCCCGTCGACCCCATGAAGAGGCAGCATCATGCCGGGCGATGGGA--ACAGAGACTGCAGCGCGGACAGACGTTTGTGTTGCAAGCAAAC---ACACA-------CCTCCAGGG-TAAATGTTTATTCC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1410610 255 + 3144229 TTTTAAAAGAAGGGT-AAAACATTCCACCACTGCAGGTGGCTGT---GAA-----AGTGAGGAGGGAGAGCTT-TGT----GGA--------AAGACACGGAAAA---------TTGCTCTT--------GAGCCAACGACTGCT-GCTTCCTTCTC---------CCTGCACCCTTCAGACAGGCGCCGTTCCCG---ACCCCGTGAAGAGGCAGCATCATGCCGGGCGATGGGA--ACAGAGACTGCAGCGCGGACAGACGTTTGTGTTGCAAGCAAAC---ACACA-------CCTCCAGGG-TAAATGTTTATTCC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96696931 257 + 98384682 TTTTAAAATAAGGGTAAAAAAATTCCACCACTGCAGGTGACTGC---GAA-----AATGAGGAGGGAGAGCTT-TGT----GGA--------AGGACACGGAAAA---------TTGCTCTT-------AGAGCCAACAACTGCT-GCTTCCTTCTC---------CCTGCACCCTTCAGACAGGCGCCGTTCCGG---ACCCCATGAAGAGGCAGCATCATGCCGGGCGATGGGA--ACAGAGACTGCAGCACGGACACACGTTTGTGTTGCAAGCAAAC---ACACA-------CCTGCAGGG-TAAATGTTTATTCC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8232753 256 - 10857215 TTTTAAAAGAAGGGT-AAAACATTCCACCACTGCAGGTGGCTGT---GAA-----AGTGAGGAGGGAGAGCTT-TGT----GGA--------AGGACATGGAAAA---------TTGCTCTT-------AGAGCCAACGACTGCT-GCTTCCTTCTC---------CCTGCACCCTTCAGACAGGCGCCGTTCCCG---ACCCCGTGAGGAGGCAGCATCATGCCGGGCGATGGGA--ACAGAGACTGCAGCGCGGACAGACGTTTGTGTTGCAAGCAAAC---ACACA-------CCTCCAGGG-TAAATGTTTATTCC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15624470 257 - 23502949 TTTTAAAATAAGGTTAAAAAAATTCCACCACTGCAGGTGACTGT---GAA-----AGTGAGGAGGGAGAGCTT-TGT----GGA--------AGGACACGGAAAA---------TTGCTCTC-------AGAGCCAACAACTGCT-GCTTCCTTCTC---------CCTGCACCCTTCAGTCAGGCGCCGTTCCTG---ACCCCGTGAAGAGGCAGCATCATGCCTCTTGATGGGA--ACAGAGACTGCAGCACGGACAGACGTTTGTGTTGCAAGCAAAC---ACACA-------CCTCCAGGG-TAAATGTTTATTCC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169903926 256 + 171630274 TTTTAAAATAAAGGT-AAAAAATGCCACCGTGGCAGGTGACTGT---GAA-----AGTGAGGAGGGAGCCCCTGTATGGAAGGC--------AGGACAGGAACAA---------TTGCTCTC-------ATAGCCAAACACTGCT-GGTCCCTTCTT---------CCCGCACCCTCCAGACGGGCGCTGTTCCCC---ACCCCATGAAGAGGCG---TGGTGCCA-GCGATGGGAACACGCAGGCTGCAGCGTGAACGGGCATTCATGGTGCCAGCGGAC---GCACA----------CCAGGG-CGAATGTTTATTCC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1307621 261 - 2905041 TTTTAAGATAAGGGT-GAAAAATCCCGCCGTGGCAGGTGACTGT---GAA-----GGTGAGGAGGGAGCCCCTGGATGACAGGA--------AGGACAGGACAAC---------TTGCTCTC-------ATAG-CAAACGCTGCC-GGTCCCTTCTT---------CCTGCACCCTCCAGCCGGGCGCTGTTCCCC---ACCCCGTGAAGAGGCGGCATCGTGCCG-GCGATGGGAACACGCAGGCTGCAGTGTGAATGGGCGCTCATGGTGCCAGCGGAC---GCACA-------CCTCCAGGG-CCAATGTTTATTCC i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1270102 261 - 2164891 TTTTGAAATAAGGGT-AAAAAATGCCACCCCGGCAGGTGACTGT---GAA-----AGTGAGGAGGGAGCCCCTGTATGAAAGGA--------AGGACAGGAAAAA---------TTGCTCTC-------ATAGCCAGATGCTGCT-GGCCCCTTCTT----------CTGCACCCTCCAGACAGGCACCATTCCCC---ACCCCATGAAGAGGCGGCGTCGTGCCG-TCAATGGGAACATGCAGACTGCAGTGTGAATGGGCGTTCGTGGTGCCAGCGGAC---GCACA-------CCTTCAGGG-TGAATGTTTATTCC i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1518494 257 - 1813869 TTTTAAAATAAGGGT-AAAAAACGCCACTGTGGCAGGTGAC--T---GAA-----AGTGAGGAGGGAGCCCCGGTATGAAAGGA--------AGGACAGGAAAAG---------TTCCTCTC-------ATAGCCAAACGCTGCT-GGTCCCTTC------------CTGCACCATCCAGACAGGCGCTGTTCCCC---ACCCCATGAAGAGGTGGTGTTGTGCCG-GCAACGGGAACACGCAGACTGCAGCGTGAACGGGCGTTCGTGGTGCCAGCGGAC---GCACA-------CCTCCAGGG-CGAACGTTTATTCC i aotNan1.NW_018494782v1 C 0 I 23 s otoGar3.GL873575 10960437 227 - 12073884 TTTTTTAATAAAGGT-AAAGAATATCCTCCCTTCAGCTGACTGT---GAAGGATTAGGGTTGACAAAGCCCATGTGT----AGAGTGTGGATGAGGCTGGTAGCA---------CAGCTCTT-------ACCACCAATAACCACT-GTT--CTTCCT---------TCTG--CTCTGAAGACAA-----ATTCTTG---ATAGTGAGAAGAGGC--CACTATGCCGAGTGATGGAA-------------------CACAGATGTGTGTATTGGGAGCTGACTGGGCCCA-------CGTCC------------------- i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56186598 233 + 122678785 TTTTTAAATAAGCGC--GGAAGCTCCACCTTTTCTGATGATCAG---GAA-----AGTCAGGAGAGAAA------------GGA--------AAGAAG------------------GCCCTG-------ACCGGCA----CCGCTGGGTTCCCTCTCCCCCGGGGTCCCCTGCCCCCGGGACAA-CGAGGGTCTCC---AGGGTGCCAAGAGGTCCCGATACAGCAGGC--------------GGCCGCGGCGCGAAAGTGGCCTGGTG------GCTGCC---ACGCAGGTGGCGAGTCCGGGC-TGAGTGTTTCCTCC i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 586565 267 + 760995 tattaaaataaggtt--aaaagttcttctttttcaaatggctgttgggaa-----aatcaagggagagaacttgtgt----gaa--------aacCTCTCGAAAGTCAGCATGTTTGCTCTCTAATTTTACAGCCAAGAATTATG-ACCCTTATCTT----------TTGCCGCCTGATAACGGGAAGGGTTGTGG---ATCTATCAGAGCAGGAG-ATAAT-----GTAAAAAAAATACAATGGATGTAGT----ATAGACATTGGTGTTTTAAGGTGAC---ACATG-------CTTTCGGGGCTAAATATCCATCCC i dasNov3.JH569188 C 0 C 0 a score=360016.000000 s hg38.chr6_KB021644v2_alt 120086 57 + 185823 AGAGGCACCACCATTCCCACGCCCAGCGAGTGTGCAT------TCTTTCTGGATTCAGAGCCC s panTro5.chr6 173576313 57 + 175400573 AGAGGCACCACCGTTCCCACGCCCAGCGAGTGTGCAT------TCTTTCTGGATTCAGAGCCC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171809740 57 + 173848474 AGAGGCACCACCGTTCCCACGCCCAGCGAGTGTGCAT------TCTTTCTGGATTCAGAGCCC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11492780 57 - 12463322 AGAGACACCACCGTTCCCACGCCCAGCGAGTGTGCAT------TCTTTCTGGATTCAGAGCCC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156321684 57 + 157873769 AGAGGCACCACCATTCCCACGCCCAGTGAGTGTGCAT------TCTTTCTGGATTCAGAGCCC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170347282 57 + 172585720 AGAGGCAACACCGTTCCCACGCCCAGCGAGTGTGCAT------TCTTTCTGGATTCAGAGCCC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169092556 57 - 170955103 AGAGGCAACACCGTTCCCACGCCCAGCGAGTGTGCAT------TCTTTCTGGATTCAGAGCCC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8379165 57 + 10161646 AGAGGCAACACCGTTCCCACGCCCAGCGAGTGTGCAT------TCTTTCTGGATTCAGAGCCC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1410865 57 + 3144229 AGAGGCAACACCGGTCCCACGCCCAGCGACTGTGCAT------TCTTTCTGGATTCAGAGCCC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96697188 57 + 98384682 AGAGGCAACACCGTTCCCACGCCCAGCGACTGTGCAT------TCTTTCTGGATTCAGAGCCC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8233009 57 - 10857215 AGAGGCAACACCGTTCCCACGCCCAGCGACTGTGCAT------TCTTTCTGGATTCAGAGCCC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15624727 57 - 23502949 AGAGGCAACACCGTTCCCACGTCCAGCGAGTGTGCAT------TCTTTCCGGATTCAGAGCCC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169904182 23 + 171630274 --GGGCACCG-CGTTCCCACACGCAG------------------------------------- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1307882 23 - 2905041 --GGGCACCG-CGTTCCCACGCCCAG------------------------------------- i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1270363 23 - 2164891 --GGGCACCG-CGTTCCCACGCCCAG------------------------------------- i cebCap1.NW_016107695v1 C 0 C 0 s otoGar3.GL873575 10960664 63 - 12073884 AGGGGCACCACCATCACCATGCTGAACATGAGAGCATCTCACATCTCATTATTTTCAGATCTC i otoGar3.GL873575 C 0 I 6 s canFam3.chr1 56186831 51 + 122678785 ------AGCGGCGCTGCCATCCGGAGCCCGTGTGCAT------TATTTCTGGATGCAGGGCTC i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 586832 56 + 760995 AGTGCCGCTGCTATTAGCAAACGGAG-GGTTGCACAC------TATTTCTGGATTCTCAGCTC i dasNov3.JH569188 C 0 C 0 e aotNan1.NW_018494782v1 1518751 23 - 1813869 I a score=10779142.000000 s hg38.chr6_KB021644v2_alt 120143 987 + 185823 CACAGTTGTGTTTGTGAGTCATCAATGGTGAACGGTGGGGCCTTCTGGGGACAGGGGT-GTGATCCATGTCTCCGTTTTCAGGTGACAACACCAGTCCCCCACCCACCTCACCCCA--AACAAAGAGGCCACTGATCCGGGCCGCACAG----ACACC-GCAGCCAGCAGCCATGCGGCCCCGCCTTTTCA-TTT--ATTAAGCAGAGATTAATAATGGTATATTTACGGCCTGTCTGC-GGCCGAGCGACACTGCGGCATTGATTCATTTCTGACCCTAGTATTGCGGGAACAACGACGCCGTTGAGTTC-GCTG-CTAGATTTATCACTTGAGGAGGTG-GGAGGAGA---AGGGGGTTACTGCAAATAG-AAAAC--GCACCTCTGGAAGCCCTTATTTATGAGCTGCTCAGGAACCGACCCCAAGACATA-GCCACGCAGTTTCCAGTAACTGGGCGCTGTCA--CTG-GCGGGGCCTCCCCAGGTGGTGGCCGTC-GGAGGCTGTGGCCGGG--A-GGTGGCCCCGGTGCCGGCCGGGC-CACACGGACAGCGTCTGGGGCAGCCGCGCCCCTCCGTCCCCAGGCCGCAGGCTGGCCACCCTGGCCGGGCGCGCACAAGATTTACACACCATCGGCG-----CCCACAGAGT-CGACGGG-CCAGCTCAGCTTTTTCATTAGCGTCCCCACATGGCACAGCAGAGAGTTCCTACGTCACCTCCAGAATGTATTATGCAAGGGCTATTTCTGTATTT-------------CTGTATCTACTGAGAGGTTATGTCAGGCAGCCCATCAACGGAAAAATGTG---AAAGCAGGT--TGTGACAGAAC----GAAT-----ATTCA----GCCCAGCCCAGCACTGGACACAGATTAGGAGTTCATAAA-ATATTAATATTTGTGGGC----CGATGGA-TTTTTGTCAGCTTCTGTGGTTTAtttctcttcttttttctcttt---cttttttccttt--tcCTCTT-A----AAAAAAA---GAAGTTTAAAATGCATGACATACTATCAGTTGTTAATGAGAAAGTAAAA s panTro5.chr6 173576370 990 + 175400573 CACAGTTGTGTTTGTGAGTCATCAATGGTGAACGCTGGGGCCTTCTGGGGACAGGGGT-GTGATCCATGTCTCCGTTTTCAGGTGACAACACCAGTCCCCCACCCACCTCACCCCA--AACAAAGAGGCCACTGATCCGGGCCGCACAG----ACACC-GCAGCCAGCAGCCATGCGGCCCCGCCTTTTCA-TTT--ATTAAGCAGAGATTAATAATGGTATATTTACGGCCTGTCTGC-GGCCGAGCGACACTGCGGCATTGATTCATTTCTGACCATAGTATTGCGGGAACAACGACGCCGTTGAGTTC-GCTG-CTAGATTTATCACTTGAGGAGGTG-GGAGGAGA---AGGGGGTTACTGCAAATAG-AAAAC--GCACCTCTGGAAGCCCTTATTTATGAGCTGCTCAGGAACCGACCCCAAGACATA-GCCACGCAGTTTCCAGTAACTGGGCGCTGTAA--CTG-GCGGGGCCTCCCCAGGTGGTGGCCGTC-GGAGGCTGTGGCCGGG--A-GGTGGCCCCGGTGCTGGCCGGGC-CACACGGACAGCGTCTGGGGCAGCCGCGCCCCTCCGTCCCCAGGCCGCAGGCTGGCCACCCTGGCCGGGCGCGCACAAGATTTACACACCATCGGCG-----CCCACAGAGT-CGACGGG-CCAGCTCAGCTTTTTCATTAGCGTCCCCACATGGCACAGCAGAGGGTTCCTACGTCACCTCCAGAATGTATTATGCAAGGGCTATTTCTGTATTT-------------CTGTATCTACTGAGAGGTTATGTCAGGCAGCCCATCAACGGAAAAATGTG---AAAGCAGGT--TGTGACAGAAC----GAAT-----ATTCA----GCCTAGCCCAGCACTGGACACAGATTAGGAGTTCATAAA-ATATTAATATTTGTGGGC----CGATGGA-TTTTTGTCAGTTTCTGTGGTTTAtttctcttcttttttctcttt---cttttttccttt--tcCTCTT-A----AAAAAAAAAAGAAGTTTAAAATGCATGACATACTATCAGTTGTTAATGAGAAAGTAAAA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171809797 988 + 173848474 CACAGTTGTGTTTGTGAGTCATCAATGGTGAACGCTGGGGCCTTCTGGGGACAGGGGT-GTGATCCATGTCTCCGTTTTCAGGTGACAACACCAGTCCCCCACCCACCTCACCCCA--AACAAAGAGGCCACTGATCCGGGCCGCACAG----ACACC-GCAGCCAGCAGCCATGCGGCCCCGCCTTTTCA-TTT--ATTAAGCAGAGATTAATAATGGTATATTTACGGCCTGTCTGC-GGCCGAGCGACACTGCGGCATTGATTCATTTCTCACCATAGTATTGCGGGAACAACGACGCCGTTGAGTTC-GCTG-CTAGATTTATCACTTGAGGAGGTG-GGAGGAGA---AGGGGGTTACTGCAAATAG-AAAAC--GCACCTCTGGAAGCCCTTATTTATGAGCTGCTCAGGAACCGACCCCAAGACATA-GCCACGCAGTTTCCAGTAACTGGGCGCTGTAA--CTG-GCGGGGCCT-CCCAGGTGGTGGCCGTC-GGAGGCTGTGGCCGGG--A-GGTGGCCCCGGTGCTGGCCGGGC-CACACGGACAGCGTCTGGGGCAGCCGCGCCCCTCCGTCCCCAGGCCGCAGGCTGGCCACCCTGGCCGGGCGCGCACAAGATTTACACACCATCGGCG-----CCCACAGAGT-CGACGGG-CCAGCTCAGCTTTTTCATTAGCGTCCCCACATGGCACAGCAGAGGGTTCCTACGTCACCTCCAGAATGTATTATGCAAGGGCTATTTCTGTATTT-------------CTGTATCTACTGAGAGGTTATGTCAGGCAGCCCATCAACGGAAAAATGTG---AAAGCAGGT--TGTGACAGAAC----GAAT-----ATTCA----GCCTAGCCCAGCACTGGACACAGATTAGGAGTTCATAAA-ATATTAATATTTGTGGGC----CGATGGA-TTTTTGTCAGTTTCTGTGGTTTAtttctcttcttttttctcttt---cttttttccttt--tcCTCTT-A----AAAAAAA-AAGAAGTTTAAAATGCATGACATACTATCAGTTGTTAATGAGAAAGTAAAA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11492837 991 - 12463322 CACAGTTGTGTTTGTGAGTCATCAATGGTGAACGCTGGGGCCTTCTGGGGACAGGGGT-GTGATCCATGTCTCCGTTTTCAGGTGACAACACCAGTCCCCCACCCACCTCACCCCA--AACAAAGAGGCCACTGATCCGGGCTGCACAG----ACACCGGCAGCCAGCAGCTATGCGGCCCCGCCTTTTCA-TTT--ATTAAGCAGAGATTAATAATGGTATATTTACGGCCTGTCTGC-GGCCGAGCGACACTGCGGCATTGATTCATTTCTGACGATAGTATTGCGGGAACAACGACGCCGTTGAGTTC-GCTG-CTAGATTTATCACTTGAGGAGGTG-GGAGGAGA---AGGGGGTTACTACAAATAG-AAAAC--GCACCTCTGGAAGCCGTTATTTATGAGCTGCTCAGGAACCGACCCCAAGACATA-GCCACGCAGTTTCCAGTAACTGGGCGCTGTAA--CTG-GCGGGGCCTCCCCAGGTGGTGGCCGTC-GGAGGCTGTGGCCGGG--A-GGTGGCCCTGGTGCTGGCCGGGC-CACACGGACAGCGTCTGGGGCAGCCGCGCCCCTCCGTCCCCAGGCCGCAGGCTGGCCACCCTGGCCGGGCGCGCACAAGATTTACACACCATCGGCG-----CCCACAGAGT-CGACGGG-CCAGCTCAGCTTTTTCATTAGCGTCCCCACATGGCACAGCAGAGGGTTCCTACGTCACCTCCAGAATGTATTATGCAAGGGCTATTTCTGTATTT-------------CTGTGTCTACTGAGAGGTTATGTCAGGCAGCCCATCAACGGAAAAATGTG---AAAGCAGGT--TGTGACAGAAC----GAAT-----ATTCA----gcccagcccagcactggacacagattaggagttcataaa-atattaatatttgtgggc----cgatgga-ttTTTGTCAGCTTCTGTGGTTTAtttctcttcttttttctcttt---cttttttccttt--tcctctt-T----AAAAAAAAAAGAAGTTTAAAATGCATGACATACTATCAGTTGTTAATGAGAAAGTAAAA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156321741 986 + 157873769 CACAGTTGTGTTTGTGAGTCATCAATGGTGAACGCTGGGGCCTTCTGGGGACAGGGGT-GTGATCCATGTTTCCGTTTTCGGGTGACAACACCAGTCCCTCACCCACCTCACCCCG--AACAAAGAGGCCACTGATCCTGGCCGCACAG----TCACCGGCAGCCAGCAGCTATGTGGCCCCGCCTTTTCA-TTT--ATTAAGCAGAGATTAATAATGGTATATTTACGGCCTGTCTGC-GGCCGAGCGACACTGCAGCATTGATTCATTTCTGACCATAGTATTGCGGGAACAATGACACCGTTGAGTTC-GTTG-CTAGATTTATCACTTGAGGAGGTG-GGAGGAGA---AGGGGATTACTGCAAATAG-AAAAC--GCACCTCTGGAAACCGTTATTTATGGGCTGCTCAGGAACTGACCCCAAGACATA-GCCACGCAGTTTCCAGTAACTGGGCGCTGTGA--CTG-GCGGGGCCTCCCCAGGTGGTGGCCGTC-GGAGGCTGTGGCCGGG--A-GGTGGCCCCGGTGCTGGCCGGGC-CACATGGAGAGCGTCTGGGGCAGCCGCGCCCCTCCGTCCCCAGGCCGCAGGCTGGCCACCGTGGCCGGGCGCGCACAAGATTTACACACCATCGGCG-----CCCACAAAGT-CGACGGG-CCAGCTCAGCTTTTTCATTAGCGTCCCCACATGGCACAGCAGAGGGTTCCTACGTCACCTCCAGAATGTATTATGCAAGGGCTATTTCTGTGCTT-------------CTGTATCTACTGAGAGGTTATGTCAGGCAGTCCATCAATGGAAACACGTG---AAAGCAGGT--TGTGATAGAAG----GAAT-----ATTCA----GCCCAGCCCAGCACTGGACACAGATTAGGAGTTCATAAA-ATATTAATATTTGTGGGC----CTATGGA-TTTTTGTCAGCTTCTGTGGTTTAtttctcttcttttttctcttt---cttttttccttt--tcctctt-A----AAAAAAA-----AGTTTAAAATGCATGACATACTATCAGTTGTTAATGAGAAAGTAAAA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170347339 989 + 172585720 CACAGTTGTGTTTGTGAGTCATCAATGGTGAACGCTGGGGCCTTCTCGGGACAGGAGT-GTGATCCGTGTCTCCGTTTTCAGGTGACAACACCAGTCCCCCACCCACCTCACCCCA--AACAAAGAGGCCACTGATCCCGGCCGCACAG----ACACTGGCAGCCGGCAGCTATGCGGCCCCGCCTTTTCA-TTT--ATTAAGCAGAGATTAATAATGGTATATTTATGGCCTGTCTGC-GGCCGAGCGACACTGTGGCATTGATTCACCTCTGACCATAGTCTTGCGGGAACAACGACGCTGTTGAGCTT-GTTG-CTAGATTTATCACTTGAGGAGGTG-GGAGGAGA---AGGGGGTTACTGCAAATAG-AAAAC--GCACCTCTGGAAACCGTTATTTATGGGCTGCTCAGGAACTGACCCCAAGACATA-GTCACGCAGTTTCCAGTAAGTGGGCGCTGGGA--CTG-GCGGGGCCTCCCCAGGCGGTGGCCGTC-GGAGGCTGTGGCCGGG--A-GGTGGCCCCAGTGCTGGCCGGGC-CACACGAACAGCATCTGGGGCAGCCGCGCCCCTCCATCCCCAGGCCGCAGTCTGGCCACCCTGGCAGGGCATGCACAAGATTTACACATCACCGGCA-----CCCACAGAGT-CAACAGA-CCAGCTCAGCTTTGTCATTAGCGTCCCCACATGGCACAGCGGAGGGTTCCCACGTCACCTCCAGAATGTATTATGCAAGGGCTATTTCTGTTTTT-------------CTGTATCTACTGAGAGGTTATGTCAGGCAGCCCATCAATGGAAAAACGTG---AAAGCAGGT--TGTGACAGAAC----GAAT-----ATTCA----GCCCAGCCCAGCACTGGACACAGACTAGGAGTCCATAAA-ATATTAATCTTTGTGGGC----CGATGGA-TTTTTGTCAGCTTCTGTGGCTTATTTATCTTCTTTTTTCTCTTT---CTTTCTTCCTTT--TCCTCTT-T----AAAAAAA--AGAAATTTAAAATGCATGACATACTACCAGTTGTTAATGAGAAAGTAAAA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169092613 989 - 170955103 CACAGTTGTGTTTGTGAGTCATCAATGGTGAACGCTGGGGCCTTCTCGGGACAGGAGT-GTGATCCGTGTCTCCGTTTTCAGGTGACAACACCAGTCCCCCACCCACCTCACCCCA--AACAAAGAGGCCACTGATCCTGGCCGCACAG----ACACTGGCAGCCGGCAGCTATGCGGCCCCGCCTTTTCA-TTT--ATTAAGCAGAGATTAATAATGGTATATTTATGGCCTGTCTGC-GGCCGAGCGACACTGTGGCATTGATTCACCTCTGACCATAGTCTTGCGGGAACAACGACGCTGTTGAGCTT-GTTG-CTAGATTTATCACTTGAGGAGGTG-GGAGGAGA---AGGGGGTTACTGCAAATAG-AAAAC--GCACCTCTGGAAACCGTTATTTATGGGCTGCTCAGGAACTGACCCCAAGACATA-GCCACGCAGTTTCCAGTAAGTGGGCGCTGGGA--CTG-GCGGGGCCTCCCCAGGCGGTGGCCGTC-GGAGGCTGTGGCCGGG--A-GGTGGCCCCAGTGCTGGCCGGGC-CACACGAACAGCATCTGGGGCAGCCGCGCCCCTCCATCCCCAGGCCGCAGTCTGGCCACCCTGGCAGGGCATGCACAAGATTTACACATCACCGGCA-----CCCACAGAGT-CAACAGA-CCAGCTCAGCTTTGTCATTAGCGTCCCCACATGGCACAGCGGAGGGTTCCCACGTCACCTCCAGAATGTATTATGCAAGGGCTATTTCTGTTTTT-------------CTGTATCTACTGAGAAGTTATGTCAGGCAGCCCATCAATGGAAAAACGTG---AAAGCAGGT--TGTGACAGAAC----GAAT-----ATTCA----GCCCAGCCCAGCACTGGACACAGACTAGGAGTCCATAAA-ATATTAATCGTTGTGGGC----CGATGGA-TTTTTGTCAGCTTCTGTGGCttatttatcttcttttttctcttt---ctttcttccttt--tcctctt-t----AAAAAAA--AGAAATTTAAAATGCATGACATACTACCAGTTGTTAATGAGAAAGTAAAA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8379222 988 + 10161646 CACAGTTGTGTTTGTGAGTCATCAATGGTGAACGCTGGGGCCTTCTCGGGACACGAGT-GTGATCCGTGTCTCCGTTTTCAGGTGACAACACCAGTCCGCCACCCACCTCACCCCA--AACAAAGAGGCCACTGATCCCGGCCGCACAG----ACACTGGCAGCCGGCAGCTATGCGGCCCCGCCTTTTCA-TTT--ATTAAGCAGAGATTAATAATGGTATATTTATGGCCTGTCTGC-AGCCGAGCGACACTGTGGCATTGATTCACCTCTGACCATAGTCTTGCGGGAACAACGACGCTGTTGAGCTT-GTTG-CTAGATTTATCACTTGAGGAGGTG-GGAGGAGA---AGGGGGTTACTGCAAATAG-AAAAC--GCACCTCTGGAAACCGTTATTTATGGGCTGCTCAGGAACTGACCCCAAGACATA-GCCACGCAGTTTCCAGTAAGTGGGCGCTGGGA--CTG-GCGGGGCCTCCCCAGGCGGTGGCCGTC-GGAGGCTGTGGCCAGG--A-GGAGGCCCCGGTGCTGGCCGGGC-CACACGAACAGCATCTGGGGCAGCCGCGCCCCTCCATCCCCAGGCCGCAGTCTGGCCACCCTGGCAGGGCATGCACAAGATTTACACATCACCGGCA-----CCCACAGAGT-CAACAGA-CCAGCTCAGCTTTGTCATTAGCGTCCCCACATGGCACAGCGGAGGGTTCCCACGTCACCTCCAGAATGTATTATGCAAGGGCTATTTCTGTTTTT-------------CTGTATCTACTGAGAGGTTATGTCAGGCAGCCCATCAATGGAAAAACGTG---AAAGCAGGT--TGTGACAGAAC----GAAT-----ATTCA----GCCCAGCCCAGCACTGGACACAGACTAGGAGTCCATAAA-ATATTAATCTTTGTGGGC----CGATGGA-TTTTTGTCAGCTTCTGTAGCttatttatcttcttttt--tcttt---ctttcttccttt--TCCTCTTAA----AAAAAAA--AGAAATTTAAAATGCATGACATACTACCAGTTGTTAATGAGAAAGTAAAA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1410922 989 + 3144229 CACAGTTGTGTTTGTGAGTCATCAATGGTGAACGCTGGGGCCTTCTCGGGACAGCAGT-GTGATCCGTGTCTCCGTTTTCAGGTGACAACACCAGTCCCCCACCCACCTCACCCCA--AACAAAGAGGCCACTGATCCCGGCCGCACAG----ACACTGGCAGCCAGCAGCTATGCGGCCCCGCCTTTTCA-TTT--ATTAAGCAGAGATTAATAATGGTATATTTATGGCCTGTCTGC-GGCCGAGCGACACTGTGGCATTGATTCACCTCTGACCATAGTCTTGCGGGAACAACGACGCTGTTGAGTTC-GTTG-CTAGATTTATCACTTGAGGAGGTG-GGAGGAGA---AGGGGGTTACTGCAAATAG-AAAAC--GCACCTCTGGAAACCATTATTTATGGGCTGCTCAGGAACTGACCCCAAGACATA-GCCACGCAGTTTCCAGTAAGTGGTCGCTGGGA--CTG-GCGGGGCCTCCCCAGGCGGTGGCCGTC-GGAGGCTGTGGCCGGG--A-GGTGGCCCCGGTGCTGGCCGGGC-CACACGGACAGCGTCTGGGGCAGCCGCACCCCTCCATCCCCAGGCCGCAGTCTGGCCACCCTGGCCGGGCACGCACAAGATTTACACATCACCGGCG-----CCCACAGAGT-CGACAGA-CCAGCTCAGCTTTGTCATTAGCGTCCCCACACGGCACAGCAGAGGGTTCCCACGTCACCTCCAGAATGTATTATGCAAGGGCTATTTCTGTTTTT-------------CTGTATCTACTGAGAGGTTATGTCAGGCAGCCCATCAATGGAAAAACGTG---AAAGCAGGT--TGTGACAGAAC----GAAT-----ATTCA----GCCCAGCCCAGCACTGCACACAGACTAGGAGTCCATAAA-ATATTAATCTTTGTGGGC----CGATGGA-TTTTTGTCAGTTTCTGTGGCTTATTTCTCTTCTTTTTTCTCTTT---CTTTCTTCCTTT--TCCTCTT-T----AAAAAAA--AGAAATTTAAAATGCATGGCATACTACCAGTTGTTAATGAGAAAGTAAAA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96697245 991 + 98384682 CACAGTTGTGTTTGTGAGTCATCAATGGTGAACGCTGGGGCCTTCTCGGGACAGGAGT-GTGCTCCGTGTCTCCGTTTTCAGGTGACAACACCAATCCCCCACCCACCTCACCCCA--AACAAAGAGGCCACTGATCCCGGCCGCACAG----ACACTGGCAGCCGGCAGCTATGCGGCCCCGCCTTTTCA-TTT--ATTAAGCAGAGATTAATAATGGTATATTTATGGCCTGTCTGC-GGCCGAGCGACACTGTGGCATTGATTCACCTCTGACCATAGTCTTGCGGGAACAACGACGCTGTTGAGCTC-GTTG-CTAGATTTATCACTTGAGGAGGTG-GGAGGAGA---AGGGGGTTACTGCAAATAG-AAAAC--GCACCTCTGGAAACCGTTATTTATGGGCTGCTCAGGAACTGACCCCAAGACATA-GCCACGCTGTTTCCAGTAAGTGGCCGCTGGGA--CTG-GCGGGGCCTCCCCAGGTGGTGGCCGTC-GGAGGCTGTGGCCGGG--A-GGTGGCCCCGGTGCTGGCCGGGC-CACACGGACAGCGTCTGGGGCAGCCGCGCCCCTCCATCCCCAGGCAGCAGTCTGGCCACCCTGGCCGGGCACGCACAAGATTTACACATCACCGGCG-----CCCACAGAGT-CGACAGA-CCAGCTCAGCTTTGTCATTAGCGTCCCCACACGGCACAGCAGAGGGTTCCTACGTCACCTCCAGAATGTATTATGCAAGGGCTATTTCTGTTTTT-------------CTGTATCTACAGAGAGGTTATGTCAGGCAGTCCATCAATGGAAAAACGTG---AAAGGAGGT--TGTGACAGAAC----GAAT-----ATTGA----CCCCAGCCCAGCACTGCACACAGACTAGGAGTCCATAAA-ATATTAATCTTTGTGGGC----CCATGGA-TTTTTGTCAGCTTCTGTGGCTTATTTCTCTTCTTTTTTCTCTTT---CTTTCTTCCTTT--TCCTCTT-T--AAAAAAAAA--AGAAATTTAAAATGCATGACATACTACCAGTTGTTAATGAGAAAGTAAAA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8233066 989 - 10857215 CACAGTTGTGTTTGTGAGTCATCAATGGTGAACGCTGGGGCCTTCTCGGGACAGGAGT-GTGATCCGTGTCTCCGTTTTCAGGTGACAACACCAGTCCCCCACCCACCTCACCCCA--AACAAAGAGGCCACTGATCCCGGCCGCACAG----ACACTGGCAGCCGGCAGCTATGCGGCCCCGCCTTTTCA-TTT--ATTAAGCAGAGATTAATAATGGTATATTTATGGCCTGTCTGC-GGCCGAGCGACACTGTGGCATTGATTCACCTCTGACCATAGTCTTGCGGGAACAACGACGCTGTTGAGTTC-GTTG-CTAGATTTATCACCTGAGGAGGTG-GGAGGAGA---AGGGGGTTACTGCAAATAG-AAAAC--GCACCTCTGGAAACCATTATTTATGGGCTGCTCAGGAACTGACCCCAAGACATA-GCCACGCAGTTTCCAGTAAGTGGGCGCTGGGA--CTG-GCGGGGCCTCCCCAGGCGGTGGCCGTC-GGAGGCTGTGGCCGGG--A-GGTGGCCCCGGTGCTGGCCGGGC-CACACGGACAGCGTCTGGGGCAGCCGCACCCCTCCATCCCCAGGCCGCAGTCTGGCCACCCTGGCCGGGCACGCACAAGATTTACACATCACTGGCG-----CCCACAGAGT-CGACAGA-CCAGCTCAGCTTTGTCATTAGCGTCCCCACACGGCACAGCAGAGGGTTCCCACGTCACCTCCAGAATGTATTATGCAAGGGCTATTTCTGTTTTT-------------CTGTATCTACTTAGAGGTTATGTCAGGCAGCCCATCAATGGAAAAACGTG---AAAGCAGGT--TGTGACAGAAC----GAAT-----ATTCA----GCCCAGCCCAGCACTGCACACAGACTAGGAGTCCATAAA-ATATTAATCTTTGTGGGC----CGATGGA-TTTTTGTCAGCTTCTGTGGCTTATTTCTCTTCTTTTTTCTCTTT---CTTTCTTCCTTT--TCCTCTT-T----AAAAAAA--AGAAATTTAAAATGCATGACATACTACCAGTTGTTAATGAGAAAGTAAAA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15624784 988 - 23502949 CAC-GTTGTGTTTGTGAGTCATCAATGGTGAACGCTGGGGCCTTCTCGGGACAGGAGT-GTGATCCATGTCTCCGTTTTCAGGTGACAACACCAGTCCCCCACCCACCTCACCCCA--AACAAAGAGGCCACTGATCCTGGCCGCACAG----ACACTGGCAGCCGGCAGCTATGCGGCCCCGCCTTTTCA-TTT--ATTAAGCAGAGATTAATAATGGTATATTTATGGCCTGTCTGC-GGCCGAGCGACACTGTGGCATTGATTCACCTCTGACCATAGTATTGCGGGAACAACGACGCTGTTGAGTTT-GTTG-CTAGATTTATCACTTGAGGAGGTG-GGAGGAGA---AGGGGGTTACTGCAAATAG-AAAAC--GCACCTCTGGAAACCGTTATTTATGGGCTGCTCAGGAACTGACCCCAAGACATA-GCCACGCAGTTTCCAGTAAGTGGCCGCTGGGA--CTG-GCGGGGCCTCCCCAGGCGGTGGCCGTC-GGAGACTGTGGCCGGG--A-GGTGGCCCCGGTGCTGGCCGGGC-CACACGGACAGCATCTGGGGCAGCCGCGCCCCTCCATCCCCAGGCCGCAGTCTGGCCACCCTGGCCGGGCACGCACAAGATTTACACACCACCGGCG-----CCCACAGAGT-CCACGGA-CCAGCTCAGCTTTCTCATTAGCGTCCCCACACGGCACAGCAGAGGGTTCCTACGTCACCTCCAGAATGTATTATGCAAGGGCTATTTCTGTTTTT-------------CTGTATCTACTGAGAGGTTATGTCAGGCAGCCCATCAATGGAAAACCGTG---AAAGCAGGT--TGTGACAGAAC----GAAT-----ATTCA----GCCCAGCCCAGCACTAGACACAGACTAGGAGTCCATAAA-ATGTTAATCTTTGTGGGC----CGATGGA-TTTTTGTCAGCTTCTGTGGCTTATTTCTCTTCTTTTTTCTCTTT---CTTTCTTCCTTT--TCCTCTT-T----AAAAAAA--AGAAATTTAAAATGCATGACATACTACCAGTTGTTAATGAGAAAGTAAAA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169904205 977 + 171630274 CACAGTTGTCTTTGTGAGTCATCAAGGGTGAACCCTGAGGCCTTTTGGGGACAGGGGT-GTGACCCA-GTCTCCGTTTTCAGGTGACAACACCACTCCCCTGCCCACCCCACCCCA--AACAAAGAGGCCACTGATCCTGGCCGCGCAG----ACCTGGGCAGCCAGCAGCTCTGCGGCCCCACCTTTACATTTT--ATTAAGCACAGATTAATAATGGTGTATTTATGGGCTGTCTGC-GGCCG-GCGACACTGTGGCCTTGATTCATTTCTGACCGTAACATTGT-GGAACAACCATGCCGTTGAGTTC-GTTG-CTGGATTTATCACTCAAGGAGATG-GGCGGAGA---AGGGGGCTGCCACAAATAG-AAAAC--TCACCTCTGGAAACGGCTATTTATGGGCTGCTCGGGAACTGACCCCAAGACATG-GCCACACAGTTTCCAGTAAGTGGGCGGCGTGA--CTG-GCGGGGCCTCCCCAGGTGGTGGCCGTC-GGAGGCTGTGGCCGGG--A-CGTGGCCCCGCTGCTGGCC-GGC-CACAGGGACAGCCTCTCGGGGAGCCCTGCCCCTCCATCCTCAGGCCGCAGGCTGGCCACCCAGGCCGGGAGCACACAAGACTTACACACCATTGGTG-----CCCACAGAGT-GGACAGG--CAGCTCAGCGTTCTCATTAGCGTCCTCACATGGCACAGCAGAG-CTTCCCACG-AGCCTCCAGCGTGTATTGTGCAAGAGCTAGTTCTGTGTCT-------------CTGTATCTACTGAGCGGTCACATCCGGCCGCCCATCAGCGAAAACACGGA---AAAGCAGGTTGTGTGAGAG--A----GAAT-----ATCCC----GCCCGGCCCAGCACTAGACACAGATGAGGAGTCCAT-AA-ATACTAATATTTGCGGGC----CAAGGGG-CTTTTGTTGGCTTCTGTGGtttctc------ttcttttttcttt---ctttcttccttc--ttctctt-t---AAAAGAAA--AGGGGTTTAAAATGCATGACATGCTACTACTTGTTTATGAGAAAGTGAAA i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1307905 980 - 2905041 CACAGTTGTCTTTGTGAGTCATCGAGGGTGAACCCTGAGGCCTTTTGGGGACAGGGGT-GTGACCCA-GTCTCCGTTTTCAGGTGACACCACCACTCCCCTGCCCACCCCACCCCA--AACAAAGAGGCCAGTGATCCTGGCGGTGAAG----GCCTGGGCAGCCAGCGGCTCTGCGGCCCCGCCTTTTCATTTT--ATTAAGCAGAGATTAATAACGGTGTATTTACGGCCTGTCTGC-GGCCG-GCGACACTACAGCATTGATTTATTTCTGACCGTAATATTGT-GGAACAACCACGCCGTTGAGTTC-GTTG-CTGGATTTATCACTCAAGGAGATG-GGAGGAGA---AGGGGGCTGCCACAAATAG-AAGAT--TCACCTCTGGCAACGGCTATTTACGGGCTGCTCGGGAACTGACCCCACGTCATG-GCCATGCAGTTTCCAGTAAGTGGGCGCTGTGA--CTG-GCGGGGCCTCCCCAGGTGGTGGCCGTC-GGACGCTGTGGCCGGG--A-CGTGGCCCCACTGCTGGCC-GGC-TACAGGGACAGCCTCTCGGGGAGCCCTGCCCCTCCGTCCTCAGGCCGCAGACTGGCCACCGGGGCCGGGCGCCCACAAGATTTACACACTCTTGGTG-----CCTGCAGAGT-GGGCGGG--CAGCTCGGCGTCCTCATTACTGCCCCCACACGGCACAGCAGAG-GTGCCCACG-AACCTGCAGCATGTGTCACGCAAGGGCTGCTTCTGTGCGT-------------CTGTATCTACTGAGAGGTCACACCAGGCAGCCCATCAACGAAAAAACGGA---AGAGCAGGT--TGTGACAG--A----AAGT-----ATCCC----GCCCAGCCCAGTGCTAGGCACAGATGAGGCGTCCATAAA-ACACTAATATTTTC-GGC----CAAGGGG-TTTTTGTTGGCTTCCGTGGtttctc----cttttttttctcttt---ctttcttccttc--ttctctt-tAAAAAAAAAAA--AGAGGTTTAAAATGCATGACATACGGCTAGCTGTTTACGAGAAAGTAAAA i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1270386 981 - 2164891 CACAGTTGTCTTTGTGAGTCATTAAGGGTGAACCCTGAGGCCTTTTGGGGACAGAGGT-GTGACCTG-GTCTCCCTTTTCAGGTGACAACACCACTCCCCTGCCCATCCCACCCCA--AACAAAGAGCCCACTGATCCTGGCCATGCAG----ACCTGGGCAGCCAGCGGCTCTGCGGCCCCACCTTTTCATTTT--ATTAAGCAGAGGTTAATAATGGTGTATTTATGGCCTGTCTGC-GGCCG-GCGACACTGTGGCATTGATTCATTTCTGACCGTAATATTGT-GGAACAACCATGCCGTTGAGTTC-GTTG-CTGGATTTATCACTCAAGGAGATG-GGAGGAGA---A-GGGGCTGCTGCAAATAG-AAAAT--TCAGCTCTGGAAAC-GCTGTTTATGGGCTGCTCAGGAACTGACCCCAAGACATG-GCCACACAGTTTCCAGTAAGTGGGCGCTGTGA--CTG-GCAGGGCCACCCCAGGTGGTGGCCGTC-GGAGGCTGTGGCCGGG--A-CGTGGCCCCACTGCTGTCC-AGC-CACAGGGACAGCCTCGCGGGGAGCCCTGCCCCTCCGTCCTCAGGCCGCAGGCTGGCCACCTGGGCCGGGCGCACACAAGATTTACACACCATTGGCG-----TCCACAGAGT-GGACGGG--CAGCTCAGCGTTCTC-TTAGCGTCCCCACATGGCACAGCAGAG-GTTCCCACG-AACCTCCAGCATGTGTTATGCAAGGGCTATTTCTGTGTTT-------------CTGTATCTACTGAGAGGTCACATCAGGAAGCCCATCAACGAAAAAACGGA---AAAGCAGGT--TGTGACAGAAA----GAAT-----ATCCC----GCCTGGCCCAGTGCTAGACACAGATGAGGAGTCCATAAA-ATACTAATATTTGCGGGC----CAAGGGGTTTTTTGTTGGCTTCTGTGGTTTCTCTTCTTTTTTTTTTCTCTTT---CTTTCTTCCTTC--TTCTCTT-T----AAAAAAA--AGAGGTTTAAAATGCATGACATACTACTAGTTGTTTATGAGAAAGTAAAA i cebCap1.NW_016107695v1 C 0 I 106 s aotNan1.NW_018494782v1 1518774 975 - 1813869 CACAGTTGTCTTTGTGAGTCATCTAGGGTGAACCCTGAGGCCTTTTGGGGACAGGGGT-GTGACCCA-GTCTCCGTTTTCAAGTGACAACACCACTCCCCTGCTCACCCCACCCCA--AACAAAGAGGCCACTGATCCTGGCCGCTCAG----ACCTGGGCAGCCAGCAGCTCTGTGGCCCCACCTTTTCATTTT--ATTAAGCAGAGATTAATAATAGTGTATTTATGGCCCGTCTGC-GGCCG-GTGACACTGTGGCACTGATTCATTTCTGACCATAATATTGT-GGAACAACCATGCCGTTGAGTTC-GTCG-CTGGATTTATCACTCAAGGAGACG-GGAGGAGA---AGGGGGCTGCTGCAAATAG-AACAT--TCACCTCTGGAAACGGCTGTTTATGGGCTGCTCAGGAACTGACCTCAAGACATG-GCCACGCGGTTTCCAGTAAGTGGGCGCTGTGA--CTG-GCGGGGCCTCCCCTGGTGGTGGCTGTC-AGAGGCTGTGGCCGGG--A-CATGGCCCCACTGCTGGCC-GGC-CACAGGGACAGCCTCTCGGGGAGCCCTGCCCCTCCGTCCTCAGGCCGCAGGCTGGCCACCCGGGCCGGGCGCACACAAGATTTACACACCATTGGCG-----CCCACAGAGT-GGACGGG--CAGCTCAGTGTCCTCATTAGCGTCCCCACATGGCCCAGCAGAG-GTTCCCACG-AACCTCCAGTATGTATTATGCAAGGGCTATTTCTGTGTTT-------------CTGTATCTACTGAGAGGTCACATCAGGCAGCCCATCAACGAAAAAACGGA---AAAGCAGGT--TGTGACAGAAA----GAAT-----ATCCC----GCCCGGCCCAGCGCTAGACACAGATGAGGAGTCCATAAA-ATACTAATATTTGTGGGC----CGAGGGG--TTTTGTTGGCTTCTGTGGTTTCTC---TTCTTTTTTTCTCTTT---CTTTCTTC---C--TTCTCTT-T-----AAAAAA--AGAGGTTGGAAATGCATGACATACTACTAGCTGTTTATGAGAAAGTAAAA i aotNan1.NW_018494782v1 I 23 C 0 s otoGar3.GL873575 10960733 928 - 12073884 CAGAGTC---CCCAAGAGTCACCTGCAGGGAGAGGTGAGGCCTTCTGGGGACAGTGGT-GTGACCTGAGCCTCA--TGTCAAGTGACAGCGTGACTCACCACCACACCT-ACCCCAGGGACAAAGGGCCCACTTACCTCTCCTGTGCAG----ACTC--------------------------CCTCTTAA-TTT--ATTAAGCAGAAATTAATAATGGTATATTTACAGCCTGTCTGC-GGCTGGATGACACGGCAGCATTCACTCACTCCTCACCACAACATCTTAGGAACAACAGTGCTGGTGAGACCAATTG-CTAGATTAGCCACTC-CGGACAGA-GGGGGAGA---AGACGGTTACTGTAAATAGAAAAAT--GCACTTCTGGAAACCATTATTTATGGGCTGCTCAGGAATTGACCTGAGGACACG-GCTGTGCAGTTTCCAGTAAGTGGACGCTGTGA--CCG-AGAGGGCCTCCCCAGGTGG-GGCTGTG-CGAGGCGCTGGGCGGG--A-GGTGG-CCTGGTGCTGGCCAGTCGCATACCGGCAGCTTCTGGGG--GGTGAAGCCCGTCTTCCCCAGACCGCGGGCTGGTCACTCAGGCCCTGTGCTGACAAGATTTACGCTCCACCGGTG-----CCCGCAACGT-AACCGAAGCCAGCTCTGCCTTCTCATTAGTGTC---------------------------AATAACCTCCAAGACCTGTTACTCAAGGGCTGTTTTTGTTTTC-------------CTATGTTTAATAAAAGGTC---TTAGGCAGCCTGTTGGCAGAAAAGCGTA---AAAGCAGAT--TGTGGCAGAACCCGGGTGC-----AGCCC----TCCCAGCTCAGCGTCAGCCCCA-ACAAAGAGAGGACAA--------------GGGGGCCTCACGGTGGG-ACCCCACCCGTCTCTGTGGCTTATTTCTCCTCCTTTCCCCCCTTACCCTTTCTTTTTTT--CTCCGTT-T-TAAAAAGAAA--AGAAGTTTCAAATGCATGTCACACCACCAGTGGTTTATGACAAGGTAAAA i otoGar3.GL873575 I 6 C 0 s canFam3.chr1 56186882 876 + 122678785 CAGGGCTG-GCCCATGAGTCATTAGCGGCGAGGGCCAAGCCC----------------------CCGCGGCTCTGTCTTCAGGTgccggcgccgaccccgc-ccggggccgccAGC--AACAAAGAGCCCACTGATCCCGCTCG-------------------CCGGCCGTCCTGCAGCCCTGCCCTTTAT-TTT--ATGAAACAGAGATTCATGATGCCGTATTTACGGCATGTCTGCAGGCCGTGTGAC-CTGCGGCATTTATTCATTCCTGACCGTAATATCCT-AGAACAACGATGCTGTTGATTCCCACGG-CTAGATTTATCACTGGAGGGGGTGCGGAGGAGA---AGGCTGACTGTACACAGGA-AAAAT--GCACTTCTGGAAACTATTATTTATGGGCTGCTCAGGAACTGACCCCAAGACACG-GCCGGGCTGTTTCCAGTAAGTGGACGCGGCCA--CCGAGTGGGGCCTCCCCAGGTGGTGGCCGCC-GG-GGCTGCGGTCGGG--AGGGTGGCCCTGGT--------GGC--------------------GCGGCCG-GCCCTTCCATCC-----------------CGCCTGGGCCG-------CCGAGATTGACGCCCC---GGTG-----CCCGCAGAGC-CCACGGAGCCAGCGCCGCTCTCTCATTAGCCTGGCCACACGGCACAGCCGAGGATTCCTGCGGAACCTCCAGACTTTATTA-GTAAGAGCTGTTTTTGCTTTT-------------CTGTATCTAATGAAAGGTTATCTCAGGCAGTCGGTCAACAGAAAGCCGAG---GAGGCAGGT--TGTCACCGACG----GAAG-----GTCCAGGCGGCCCGGCTCAGC-CTCGCGGGGGACAAAGAGCCGGGAA--------ATACTTGCCGGG----GGATGGA-TTTCCACCGGCTCCAGGG-------------CTCCTTTCTCTCC---CTTTCTCC---T--TCCAGTT-C----CAAGAGA----AAATTTAAAATGCATGACACACTAGCCGTTGTTTACAAGAAAGTAAAA i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 586888 991 + 760995 CAGGATTCTATTCATGAGTCACTGATGTCGCGGGCCAAGACCTTTTTGAGACGGTGGCGGTGACCCATGTCTCGTTATTCAGGCGACAACACGG-----TCACCTACCCCACCCAG-TAACAAAGAGCCCACTGA---CGGTCGCCTAGCCCAGCACCCTCCACCAACAGTCAGGCCG--CTGGCCTCTTA-TTTGCATGAAACAGAGATTAATAATGTTATATTTATGACATGTCCGCAGGTCGTGTTACCCTGCCCCACTGATTCATTTCTGACCAGAATATCACAGGAACAACGAGGCCGTTCATTCC-AATGACTAGATTTATCACCTGGCCAGGTG-GGGGGAGACACAGGGGGTTACTGTAAATAG-CCAACCTGCGCTTCTGGTAACGATTATTTATGGGTTGCTCAAGAACTGACCCCCAGACACAGGCTGCTGGGTTTCCAGTAAGTGGCTGCAGGGACCCCA-GGGGGGCCGCCTCCCAGGGCGGCTGGCAGGAGGCCGTGGCCGGGCAG-GGCCGTCCGGGGCCTGGGCAGCT-CCCACTGCCCGTGGCTGCGGGGTC-------------CCCCGGACCACACGTGGCTCGGGCTCTCGCTGCGATGACAAGATTTAC----CCCTGGAGCCCTTCCCACGGGGTGCGAGCAG-CCAGGCCTGCTTTTTCATTAGAGTCACCGCACAGGCCAGCCCGGGATGCATAAATAAC------------TTGGGAGCTGGCTTTTTTTGTTTTTGTTTTTTTTTTTCCTGCATCTAACGAAAAGTTAGCTGAGCCAGCCTGTCCACGGAAAAAAAAGGACAAAGCATGT--TGTCACCGAGC----TAATAACCCATTCC----ACCCTAGTCGGCGGTGGACGGAGATAAGGCCTCGAGAAATAAATTACT-------GGC----AGATTAA-AACCTGGCAGGTCCTGTGGCTtctttttttttctctctctctct---ctttcttccttttctccgctt-t----ctACAAG---GAAATTTAAAGCGCCTGACA--CGATCGGTGGCTTATAAGAACATAAAA i dasNov3.JH569188 C 0 C 0 a score=170038.000000 s hg38.chr6_KB021644v2_alt 121130 27 + 185823 AGTGTAAGAAGTATTCTAAAAATAAC----A s panTro5.chr6 173577360 27 + 175400573 AGTGTAAGAAGTATTCTAAAAATAAC----A i panTro5.chr6 C 0 C 0 s panPan2.chr6 171810785 27 + 173848474 AGTGTAAGAAGTATTCTAAAAATAAC----A i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11493828 27 - 12463322 AGTGTAAGAAGTATTCTAAAAATAAC----A i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156322727 31 + 157873769 AGTATAAGAAGTATTCTAAAAATAACAGTTA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170348328 31 + 172585720 AGTGTAAGAAGTATTCTAAAAATAGTAGTTA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169093602 31 - 170955103 AGTGTAAGAAGTATTCTAAAAATAGTAGTTA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8380210 31 + 10161646 AGTGTAAGAAGTATTCTAAAAATAGTAGTTA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1411911 31 + 3144229 AGTGTAAGTAGTATTCTAAAAATAGCAGTTA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96698236 31 + 98384682 AGTGTAAGAAGTATTCTAAAAATAGCATTTA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8234055 31 - 10857215 AGTGTAAGAAGTATTCTAAAAATAGCAGTTA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15625772 31 - 23502949 AGTGTAAGAAGTATTCTAAAAATAACAGTTA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169905182 27 + 171630274 GATACAAGGAGTGTGGTGGGAGTAACA---- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1308885 27 - 2905041 GATACAGGAAGTGTTGGAAAAGTAACC---- i saiBol1.JH378287 C 0 C 0 s aotNan1.NW_018494782v1 1519749 27 - 1813869 GATACAAGAAGCGTTGTAAGAGTAACA---- i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10961661 27 - 12073884 AATACAAGAGGTGAACCAAAAATAGCA---- i otoGar3.GL873575 C 0 I 4 s canFam3.chr1 56187758 28 + 122678785 -TCTCAACAAGTA--CTAAAACTAATGCTGG i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 587879 30 + 760995 -ACTCGACAAGTCGACTGAAAATAAACTTTG i dasNov3.JH569188 C 0 C 0 e cebCap1.NW_016107695v1 1271367 106 - 2164891 I a score=1687042.000000 s hg38.chr6_KB021644v2_alt 121157 166 + 185823 GATGTTCTTTCTGTATTCCTATTTG--TGA---TT-TTTT--------------------TTTCTTTATTAAAAAG-AACCTTTGTGTTTGCACCCT-GGCGGGTTTCACTGCT--CTGAAAAAGGGA-CT----------GATGTAA-------------TTTAAAGTTAGTTAATATTTAAAAAGCGGTTCCT-GCCCACACTCAGCATTTGTGGAGTC s panTro5.chr6 173577387 167 + 175400573 GATGTTCTTTCTGTATTCCTATCTG--TGA---TTATTTT--------------------TTTCTTTATTAAAAGG-AACCTTTGTGTTTGCACCCT-GGCGGGTTTCACTGCA--CTGAAAAAGGGA-CT----------GATGTAA-------------TTTAAAGTTAGTTAATATTTAAAAAGCGGTTCCT-GCCCACACTCAGCATTTGTGGAGTC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171810812 167 + 173848474 GATGTTCTTTCTGTATTCCTATCTG--TGA---TTATTTT--------------------TTTCTTTATTAAAAAG-AACCTTTGTGTTTGCACCCT-GGCGGGTTTCACTGCA--CTGAAAAAGGGA-CT----------GATGTAA-------------TTTAAAGTTAGTTAATATTTAAAAAGCGGTTCCT-GCCCACACTCAGCATTTGTGGAGTC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11493855 166 - 12463322 GATGTTC-TTCTGTATTCCTATTTG--TGA---TTTTTTT--------------------TTTCTTTATTAAAAAG-AACCTTTGTGTTTGCACCCT-GGCGGGTTTCACTGCA--CTGAAAAAGGGA-CT----------GATGTAA-------------TTTAAAGTTAGTTAATATTTAAAAAGCGGTTCCT-GCCCACACTCAGCATTTGTGGAGTC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156322758 166 + 157873769 GATGTTCTTTCTGTATTCCTATTTG--TGA---TT-TTTT--------------------TTTCTTTAATGAAAAG-AACCTTTGTGTTTGCACCCC-GGCGGGTTTCACTGCA--CTGAGAAGTGGA-CT----------GATGTAA-------------TTTAAAGTTAGTTAATATTTAAAAAGCAGTTCCT-GCCCACACTCAGCATTTGTGGAGTC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170348359 167 + 172585720 GCTGTTCTTTCTGTATTCCTATTTG--TGA---TTTTTTT--------------------TTTCTTTAATAAAAAG-AATCTTTGTGTTTGCGTCCT-GGCGGGTTTCACTGCA--CTGAAAAATGGA-CT----------GATGTAA-------------TTTAAAGTTAGCTAATGTTTAAAAAGCGGTTGCT-GCCCACACTCAGCATTTGCGGAGTC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169093633 167 - 170955103 GCTGTTCTTTCTGTATTCCTATTTG--TGA---TTTTTTT--------------------TTTCTTTAATAAAAAG-AATCTTTGTGTTTGCATCCT-GGCGGGTTTCACTGCA--CTGAAAAGTGGA-CT----------GATGTAA-------------TTTAAAGTTAGCTAATGTTTAAAAAGCGGTTCCT-GCCCACACTCGGCATTTGCGGAGTC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8380241 167 + 10161646 GCTGTTCTTTCTGTATTCCTATTTG--TGA---TTTTTTT--------------------TTTCTTTAATAAAAAG-AATCTTTGTGTTTGCATCCT-GGCGGGTTTCACTGCA--CTGAAAAGTGGA-CT----------GATGTAA-------------TTTAAAGTTAGTTAATGTTTAAAAAGCGTTTCCT-GCCCACACTCAGCATTTGTGGAGTC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1411942 166 + 3144229 GCTGTTCTTTCTGTATTCCTATTTG--TGA----TTTTTT--------------------TTTCTTTAATAAAAAG-AATCTTTGTGTTTGCATCCT-GGCGGGTTTCACTGCA--CTGAAAAGTGGA-CT----------GATGTAA-------------TTTAAAGTTAGTTAATGTTTAAAAAGCGGTTCCT-CCCCACGCTCAGCATTTGCGGAGTC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96698267 167 + 98384682 GCTGTTCTTTCTGTATTCCTATTTG--TAA---TTTTTTT--------------------TTTCTTTAATAAAAAG-AATCTTTGTGTTTGCATCGT-GGCGGGTTTCACTGCA--CTGAAAAGTGGA-CT----------GATGGAA-------------TTTAAAGTTAGTTGATATTTAAAAAGCGGTTCCT-GCCCACACTCAGCATTTGCGGAGTC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8234086 166 - 10857215 GCTGTTCTTTCTGTATTCCTATTTG--TGA----TTTTTT--------------------TTTCTTTAATAAAAAG-AATCTTTGTGTTTGCATCCT-GGCGGGTTTCACTACA--CTGAAAAGTGGA-CT----------GATGTAA-------------TTTAAAGTTAGTTAATGTTTAAAAAGCGGTTCCT-GCCCACGCTCAGCATTTGCGGAGTC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15625803 170 - 23502949 GCTATTCTTTTTGTATTCCTGTTTG--TGATTTTTTTTTT--------------------TTCCTTTAACAAAAAG-AATCTTTGTGTTTGCATCCC-AGCGGATTTCACTGCA--CTGAAAAGTGGA-CT----------GATGTAA-------------TTTAAAGTTAGTTAATATTTAAAAAGAGGTTCCT-GCCCACACTCAGCATTTTCAGAGTC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169905209 163 + 171630274 GATGTTCTTTCTGTATTCCTGTTTG--TGA---CT-CTTT--------------------ATTCTTTAATAAAAAG-AAACTTTGTGTTTGCAGCCT-GGCAGGTTTCACTGCA--CTGA-AAGTGGA-CT----------GA-GTAG-------------TTTAAAGGTGGTTAATATTTAAAACGTGGTT-CT-GCACACGCTCCGCGTCGGCGGAGTC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1308912 162 - 2905041 GATGTTCTTTCTGTATTCCTATTTG--TGA---CT-CTTT--------------------TTTCTTTAATAAAAAG-AACCTTCGTGTTTGCACCCT-GGCAGGTT--ACTGCA--CTGA-AAGTGGA-CT----------GATGCAG-------------TTTAAAGTCAGTTAATATTTAAAGCATGGTT-CT-GCCCACACTCTGCGTTTGTGGAGTC i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1271473 182 - 2164891 GATGTTTTTTCTGTATTCCTATTTG--TGA---CT-CTTTCTTCTTTAATAAAAAGAACGTTTCTTTAATAAAAAG-AACGTTTGTGTTTGCACCCT-GGCAGGTT--ACTGCA--CTGA-AAGTGGA-CC----------AATGCAG-------------TTTAAAGTTAGTTAATATTCAAAACGTGGTT-CT-GCCCACACTCTGCGTTTGCGGAGTC i cebCap1.NW_016107695v1 I 106 I 1434 s aotNan1.NW_018494782v1 1519776 164 - 1813869 GATGTTCTTTCTGTGTTCCTATTTG--TGA---CT-CTTT--------------------TTTCTTTAATAAAAAG-AACCTTTGTGTTTGCACCCT-GGCAGTTTTCACTGCA--CTGA-AAGCGGA-CT----------GAGGCAG-------------TTTAAAGTTAGTTAATATTTAAAACGTGGTT-CT-GCCCACACTCCGCGTTTGTGGAGTC i aotNan1.NW_018494782v1 C 0 I 1490 s otoGar3.GL873575 10961692 175 - 12073884 GATGTTCGTTCTGTATCCCTATCTG--CGG---------C--------------------TTTCTTTACTAAAAGGAAACCTTTTTGTTGGCAGCCT-GGTAGATTTCACTGGA--CTGAAAAGTCAA-CT----------GATTTAATGGTGGAAAGATTTGTAGAGTTAGTTAATATTTAAAAAGTGATTCAT-GCCCAAATTCAGCTTTTACATAATC i otoGar3.GL873575 I 4 C 0 s canFam3.chr1 56187786 175 + 122678785 GAGGTCCCTCCTCTGTCCCTATTTTCCTGA------TGTT--------------------TCTCTCTAACGAGGGG-A----CCGCGCTAGGCCCCTGGGCAGGTGTGACTGCACCCCGGCAGCCGCA-CTCTCAGTGTGGGAAGGTT-------------TGCAGGGTTAGTTAATATTTAAAAGGTGACTCAT-GTCCCACTTCAACGTTTACACAATC i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 587909 165 + 760995 GATTTTCTTTCTGCATTCCAATTGG--TGA---GC-TTTC--------------------TTTCATACATGGAAAA-GCTCTTTACGGGC-CAGCCA-AGCAGGTTTCGCTGTA--TTGAGAAATACAGCT----------AGGGT---------------TGTAGCGTTAGGTAACCTTTAAAAGGTGATTCATGGTCCAAATTCAGCTTTTATGTGATC i dasNov3.JH569188 C 0 C 0 a score=96133.000000 s hg38.chr6_KB021644v2_alt 121323 25 + 185823 AAACGGAGGTTGTGCCGGTCCGTCG s panTro5.chr6 173577554 25 + 175400573 AAACGGAGGTTGTGCCGGTCCGTCG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171810979 25 + 173848474 AAACGGAGGTTGTGCCAGTCCGTCG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11494021 25 - 12463322 AAACTGAGGTTGTGCCAGTCCGTCG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156322924 25 + 157873769 AAACGGAGGCTGTGCCGGTCCGTCG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170348526 24 + 172585720 AAATGGAGACTGTGCGCGTCC-TCG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169093800 24 - 170955103 GAATGGAGGCTGTGCGCGTCC-TCG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8380408 24 + 10161646 GAATGGAGGCTGTGCGCGTCC-TCG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1412108 24 + 3144229 AAATGGAGGCTGTGCGCGTCC-TCG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96698434 25 + 98384682 AAATGGAAGCTGTGCCCGTCCGTCG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8234252 24 - 10857215 AAATGGAGGCTGTGCGTGTCC-TCG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15625973 25 - 23502949 AGATGGAGGCTGTGCCCGTCCGTCG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169905372 22 + 171630274 TCAGGGAGGTCGTCCCAC---GTCG i calJac3.chr4 C 0 I 1 s saiBol1.JH378287 1309074 25 - 2905041 TCAGGGAGGTTGACCCGTTCGGCCG i saiBol1.JH378287 C 0 I 1455 s otoGar3.GL873575 10961867 22 - 12073884 AAAATGAGTTTGTAGCTGTCAG--- i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56187961 24 + 122678785 AGATGAGGTCAGTACCTGTCGGTG- i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 588074 22 + 760995 AGACTGTGGTTTTG---GACTGTCA i dasNov3.JH569188 C 0 C 0 e aotNan1.NW_018494782v1 1519940 1490 - 1813869 I e cebCap1.NW_016107695v1 1271655 1434 - 2164891 I a score=138659.000000 s hg38.chr6_KB021644v2_alt 121348 19 + 185823 CTGAGACTTATCTCAGGAA s panTro5.chr6 173577579 19 + 175400573 CTGAGACTTATCTCAGGAA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171811004 19 + 173848474 CTGAGACTTATCTCAGGAA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11494046 19 - 12463322 CTGAGACTTATCTCAGGAA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156322949 14 + 157873769 CTGAGACTT-----AGGAA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170348550 19 + 172585720 CTGAGACTTATCTCAGGAA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169093824 19 - 170955103 CTGAGACTTATCTCAGGAA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8380432 19 + 10161646 CTGAGACTTATCTCAGGAA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1412132 19 + 3144229 CTGAGACTTATCTCAGGAA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96698459 19 + 98384682 CTGAGACTTAGCTCAGGAA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8234276 19 - 10857215 CTGAGACTTATCTCAGGAA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15625998 19 - 23502949 CTGAGACTTATCTCAGGAA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169905395 14 + 171630274 CGGAG-----TCTCAGGGA i calJac3.chr4 I 1 C 0 s otoGar3.GL873575 10961889 18 - 12073884 -TGAGAGTTATCGCAGGAA i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56187985 18 + 122678785 ATGAGA-TGATCACAGGAG i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 588096 19 + 760995 GTAAGAGTTATCATAGAAA i dasNov3.JH569188 C 0 I 1077 e saiBol1.JH378287 1309099 1455 - 2905041 I e aotNan1.NW_018494782v1 1519940 1490 - 1813869 I e cebCap1.NW_016107695v1 1271655 1434 - 2164891 I a score=8666.000000 s hg38.chr6_KB021644v2_alt 121367 1 + 185823 G s panTro5.chr6 173577598 1 + 175400573 G i panTro5.chr6 C 0 C 0 s panPan2.chr6 171811023 1 + 173848474 G i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11494065 1 - 12463322 G i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156322963 1 + 157873769 G i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170348569 1 + 172585720 G i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169093843 1 - 170955103 G i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8380451 1 + 10161646 G i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1412151 1 + 3144229 G i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96698478 1 + 98384682 G i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8234295 1 - 10857215 G i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15626017 1 - 23502949 G i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169905409 1 + 171630274 G i calJac3.chr4 C 0 I 1690 s otoGar3.GL873575 10961907 1 - 12073884 G i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56188003 1 + 122678785 A i canFam3.chr1 C 0 C 0 e saiBol1.JH378287 1309099 1455 - 2905041 I e aotNan1.NW_018494782v1 1519940 1490 - 1813869 I e cebCap1.NW_016107695v1 1271655 1434 - 2164891 I e dasNov3.JH569188 588115 1077 + 760995 I a score=63674.000000 s hg38.chr6_KB021644v2_alt 121368 13 + 185823 CGCACAGGCACGG---------- s panTro5.chr6 173577599 13 + 175400573 CGCACAGGCACGG---------- i panTro5.chr6 C 0 C 0 s panPan2.chr6 171811024 13 + 173848474 CGCACAGGCACGG---------- i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11494066 13 - 12463322 CGCACAGGCACGG---------- i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156322964 13 + 157873769 CGCACGGGCACAG---------- i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170348570 13 + 172585720 CGCACAGGCACAG---------- i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169093844 13 - 170955103 CGCACAGGCACAG---------- i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8380452 13 + 10161646 TGCACAGGCACAG---------- i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1412152 11 + 3144229 CG--CAGGCACAG---------- i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96698479 13 + 98384682 CGCACAGGCACAG---------- i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8234296 11 - 10857215 CG--CAGGCACAG---------- i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15626018 13 - 23502949 CGCACAGGCACAG---------- i colAng1.NW_012114488v1 C 0 C 0 s otoGar3.GL873575 10961908 12 - 12073884 -GCGCGGGCACAG---------- i otoGar3.GL873575 C 0 I 1130 s canFam3.chr1 56188004 17 + 122678785 ------GGCTTGGCTGCGCCCTG i canFam3.chr1 C 0 C 0 e saiBol1.JH378287 1309099 1455 - 2905041 I e aotNan1.NW_018494782v1 1519940 1490 - 1813869 I e cebCap1.NW_016107695v1 1271655 1434 - 2164891 I e calJac3.chr4 169905410 1690 + 171630274 I e dasNov3.JH569188 588115 1077 + 760995 I a score=113941.000000 s hg38.chr6_KB021644v2_alt 121381 18 + 185823 TGCTCGCCCTGAGAGTGA s panTro5.chr6 173577612 18 + 175400573 TGCTCGCCCTGAGAGTGA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171811037 18 + 173848474 TGCTCGCCCTGAGAGTGA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11494079 18 - 12463322 TGCTCGCCCTGAGAGTGA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156322977 18 + 157873769 CGCTCGCCCTGGGAGTGA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170348583 18 + 172585720 CGCTTGCCCTGGGAGTGA i rheMac8.chr4 C 0 I 1357 s macFas5.chr4 169093857 18 - 170955103 CGCTTGCCCTGGGAGTGA i macFas5.chr4 C 0 I 1345 s macNem1.NW_012011000v1 8380465 18 + 10161646 CGCTTGCCCTGGGAGTGA i macNem1.NW_012011000v1 C 0 I 1357 s cerAty1.NW_012002071v1 1412163 18 + 3144229 CGCTTGCCCTGGGAGTGA i cerAty1.NW_012002071v1 C 0 I 1359 s chlSab2.chr13 96698492 18 + 98384682 CGCTTGCCCTGGGAGTGA i chlSab2.chr13 C 0 I 1353 s manLeu1.NW_012106474v1 8234307 18 - 10857215 CGCTTGCCCTGGGAGTGA i manLeu1.NW_012106474v1 C 0 I 1359 s colAng1.NW_012114488v1 15626031 18 - 23502949 CGCTTGCCCTGGGAGTGA i colAng1.NW_012114488v1 C 0 I 1343 s canFam3.chr1 56188021 18 + 122678785 AGCCAGCCCTGGGAGGGA i canFam3.chr1 C 0 I 1339 e otoGar3.GL873575 10961920 1130 - 12073884 I e saiBol1.JH378287 1309099 1455 - 2905041 I e aotNan1.NW_018494782v1 1519940 1490 - 1813869 I e cebCap1.NW_016107695v1 1271655 1434 - 2164891 I e calJac3.chr4 169905410 1690 + 171630274 I e dasNov3.JH569188 588115 1077 + 760995 I a score=9834.000000 s hg38.chr6_KB021644v2_alt 121399 12 + 185823 GAATCGCTTGAA s panTro5.chr6 173577630 12 + 175400573 GAATCGCTTGAA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171811055 12 + 173848474 GAATCGCTTGAA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11494097 12 - 12463322 GAATCACTTGAA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156322995 12 + 157873769 GAACTGCTTGAA i nomLeu3.chr3 C 0 C 0 e otoGar3.GL873575 10961920 1130 - 12073884 I e saiBol1.JH378287 1309099 1455 - 2905041 I e aotNan1.NW_018494782v1 1519940 1490 - 1813869 I e cebCap1.NW_016107695v1 1271655 1434 - 2164891 I e calJac3.chr4 169905410 1690 + 171630274 I e dasNov3.JH569188 588115 1077 + 760995 I e colAng1.NW_012114488v1 15626049 1343 - 23502949 I e canFam3.chr1 56188039 1339 + 122678785 I e chlSab2.chr13 96698510 1353 + 98384682 I e cerAty1.NW_012002071v1 1412181 1359 + 3144229 I e manLeu1.NW_012106474v1 8234325 1359 - 10857215 I e macNem1.NW_012011000v1 8380483 1357 + 10161646 I e rheMac8.chr4 170348601 1357 + 172585720 I e macFas5.chr4 169093875 1345 - 170955103 I a score=1500.000000 s hg38.chr6_KB021644v2_alt 121411 1 + 185823 C s panTro5.chr6 173577642 1 + 175400573 C i panTro5.chr6 C 0 C 0 s panPan2.chr6 171811067 1 + 173848474 C i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11494109 1 - 12463322 C i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156323007 1 + 157873769 C i nomLeu3.chr3 C 0 C 0 s calJac3.chr4 1723605 1 - 171630274 C i calJac3.chr4 n 1690 C 0 e otoGar3.GL873575 10961920 1130 - 12073884 I e saiBol1.JH378287 1309099 1455 - 2905041 I e aotNan1.NW_018494782v1 1519940 1490 - 1813869 I e cebCap1.NW_016107695v1 1271655 1434 - 2164891 I e dasNov3.JH569188 588115 1077 + 760995 I e colAng1.NW_012114488v1 15626049 1343 - 23502949 I e canFam3.chr1 56188039 1339 + 122678785 I e chlSab2.chr13 96698510 1353 + 98384682 I e cerAty1.NW_012002071v1 1412181 1359 + 3144229 I e manLeu1.NW_012106474v1 8234325 1359 - 10857215 I e macNem1.NW_012011000v1 8380483 1357 + 10161646 I e rheMac8.chr4 170348601 1357 + 172585720 I e macFas5.chr4 169093875 1345 - 170955103 I a score=1883.000000 s hg38.chr6_KB021644v2_alt 121412 1 + 185823 C s panTro5.chr6 173577643 1 + 175400573 C i panTro5.chr6 C 0 C 0 s panPan2.chr6 171811068 1 + 173848474 C i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11494110 1 - 12463322 C i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156323008 1 + 157873769 T i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 1860326 1 + 170955103 C i macFas5.chr4 n 1345 C 0 s colAng1.NW_012114488v1 7876003 1 + 23502949 C i colAng1.NW_012114488v1 n 1343 C 0 s calJac3.chr4 1723606 1 - 171630274 C i calJac3.chr4 C 0 C 0 e otoGar3.GL873575 10961920 1130 - 12073884 I e saiBol1.JH378287 1309099 1455 - 2905041 I e aotNan1.NW_018494782v1 1519940 1490 - 1813869 I e cebCap1.NW_016107695v1 1271655 1434 - 2164891 I e dasNov3.JH569188 588115 1077 + 760995 I e canFam3.chr1 56188039 1339 + 122678785 I e chlSab2.chr13 96698510 1353 + 98384682 I e cerAty1.NW_012002071v1 1412181 1359 + 3144229 I e manLeu1.NW_012106474v1 8234325 1359 - 10857215 I e macNem1.NW_012011000v1 8380483 1357 + 10161646 I e rheMac8.chr4 170348601 1357 + 172585720 I a score=14705.000000 s hg38.chr6_KB021644v2_alt 121413 5 + 185823 CAGGG s panTro5.chr6 173577644 5 + 175400573 CAGGG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171811069 5 + 173848474 CAGGG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11494111 5 - 12463322 CAGGG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156323009 5 + 157873769 CAGGG i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 1860327 5 + 170955103 CAAGT i macFas5.chr4 C 0 C 0 s colAng1.NW_012114488v1 7876004 5 + 23502949 CAGGT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 1723607 5 - 171630274 CAGAG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1594934 5 + 2905041 CAGAG i saiBol1.JH378287 n 1455 C 0 s otoGar3.GL873575 1111067 5 + 12073884 CAGAG i otoGar3.GL873575 n 1130 C 0 e aotNan1.NW_018494782v1 1519940 1490 - 1813869 I e cebCap1.NW_016107695v1 1271655 1434 - 2164891 I e dasNov3.JH569188 588115 1077 + 760995 I e canFam3.chr1 56188039 1339 + 122678785 I e chlSab2.chr13 96698510 1353 + 98384682 I e cerAty1.NW_012002071v1 1412181 1359 + 3144229 I e manLeu1.NW_012106474v1 8234325 1359 - 10857215 I e macNem1.NW_012011000v1 8380483 1357 + 10161646 I e rheMac8.chr4 170348601 1357 + 172585720 I a score=119198.000000 s hg38.chr6_KB021644v2_alt 121418 17 + 185823 AATGAAAAGGTTATTAT s panTro5.chr6 173577649 17 + 175400573 AATGAAAAGGTTATTCT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171811074 17 + 173848474 AATGAAAAGGTTATTCT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11494116 17 - 12463322 AATGAAAAGGTTATTAT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156323014 17 + 157873769 AATGAAAAGGTTATTCT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 2236223 17 - 172585720 AATGAAAAGGTTATTCT i rheMac8.chr4 n 1357 C 0 s macFas5.chr4 1860332 17 + 170955103 AATGAAAAGGTTATTCT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 1780267 17 - 10161646 AATGAAAAGGTTATTCT i macNem1.NW_012011000v1 n 1357 C 0 s cerAty1.NW_012002071v1 1731153 17 - 3144229 AATGAAAAGGTTATTCT i cerAty1.NW_012002071v1 n 1359 C 0 s chlSab2.chr13 1685276 17 - 98384682 AATAAAAAGGTTATTCT i chlSab2.chr13 n 1353 C 0 s manLeu1.NW_012106474v1 2621995 17 + 10857215 AATGAAAAGGTTATTCT i manLeu1.NW_012106474v1 n 1359 C 0 s colAng1.NW_012114488v1 7876009 17 + 23502949 AATGAAAAGGTTATTCT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 1723612 17 - 171630274 AACGGAAAGGCTGTTCC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1594939 15 + 2905041 AACGGAAAGGCTGT--C i saiBol1.JH378287 C 0 C 0 s otoGar3.GL873575 1111072 14 + 12073884 AATGGAAAAGTTCT--- i otoGar3.GL873575 C 0 C 0 e aotNan1.NW_018494782v1 1519940 1490 - 1813869 I e cebCap1.NW_016107695v1 1271655 1434 - 2164891 I e dasNov3.JH569188 588115 1077 + 760995 I e canFam3.chr1 56188039 1339 + 122678785 I a score=2036651.000000 s hg38.chr6_KB021644v2_alt 121435 212 + 185823 CCCTGACTTAGGGCCTATTCCCTTCCCCACTTACTGTTACCCTTCCCTCAGAAACA--TTCACAGTCGAAAATGAGGATTGA-GTGTATCTCGTGAGAAGAACCACCTGGTTCTCCCGCAGAATCATAGCCCAGGATGAAAG--CATTTCTCCCAC-TGAAAGTTGAATTTAAGGACCCAACATCTTTTCATCATATGGCACACCTCAGAAAACAAA--A s panTro5.chr6 173577666 212 + 175400573 CCCTGACTTAGGGCCTATTCCCTTCCCCACTTACTGTTACCCTTCCCTCAGAAACA--TTTACAGTCGAAAACGAGGATTGA-GTGTATCTCGTGAGAAGAACCATCTGGTTCTCCCGCAGAGTCATAGCCCAGGATGAAAG--CATTTCTCCCAC-TGAAAGTTGAATTTAAGGACCCAACATCTTTTCATCATATGGCACACCTCAGAAAACAAA--A i panTro5.chr6 C 0 C 0 s panPan2.chr6 171811091 205 + 173848474 CCCTGACTTAGGGCCTATTCCCTTCCCCACTTACTGTTACCCTTCCCTCAGAAACA--TTTACAGTCGAAAATGAGGATTGA-GTGTATCTCGTGAGAAGAACCACCTGGTTCTCCCGCAGAA-------CCAGGATGAAAG--CATTTCTCCCAC-TGAAAGTTGAATTTAAGGACCCAACATCTTTTCATCATATGGCACACCTCAGAAAACAAA--A i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11494133 212 - 12463322 CCCTGACTTAGGGCCTATTCCCTTCCCCACTTACTGTTACCCTTCCCTCAGAAACA--TTTACAGTCGAAAATGAGGATTGA-GTGTATCTCGTGAGAAGAACCACCTGGTTCTCCCGCAGAATCATAGCCCAGGATGAAAG--CATTTCTCCCAC-TGAAAGTTGAATTTAAGGACCCAACATCTTTTCATCATATGGCACACCTCAGAAAACAAA--A i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156323031 208 + 157873769 CCCTGACTTAGGGCCTATTCCCTTCCCCACTTACTGTTACCCTTCCCTCAGAAACA--TTTACAGTCAAAAATGAGGATTGA-GTGTATCTCGTCAGAAGAGCCACCTGGTTCTCCCGCAGAATCATAGCCCAGGATGAAAG--CATTTCTCCCAC-TGAAAGTTGAATTTAAGGACCCAACGTCTTTTCATCATGTGGCACACCTCAGAAAAC------ i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 2236240 211 - 172585720 CCATGACTTAGGGCCTATTCCCTTCCCCATTTCCTGTTACACTTGCCCCAGAAACA--TTTACAGTCGAAAACGAGGACTGA-GTGTGTCTCGTCAGAAGAACCACCTGGTTCTCCTGCAGAATCACAGCCCAGGATGAAA---CATTTCTCCCAC-TGAAAGTTGCATCCAAGGACCCAACATCTTTTCATCATATGGCACACCTCAGAAAACAAA--A i rheMac8.chr4 C 0 C 0 s macFas5.chr4 1860349 211 + 170955103 CCATGACTTAGGGCCTATTCCCTTCCCCATTTCCTGTTACACTTGCCCCAGAAACA--TTTACAGTCGAAAACGAGGACTGA-GTGTGTCTCGTCGGAAGAACCACCTGGTTCTCCTGCAGAATCACAGCCCAGGATGAAA---CATTTCTCCCAC-TGAAAGTTGCATCCAAGGACCCAACATCTTTTCATCATATGGCACACCTCAGaaaacaaa--a i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 1780284 211 - 10161646 CCATGACTTAGGGCCTATTCCCTTCCCCATTTCCTGTTACACTTGCCCCAGAAACA--TTTACAGTCGAAAACGAGGACTGA-GTGTGTCTCGTCAGAAGAACCACCTGGTTCTCCTGCAGAATCACAGCCCAGGATGAAA---CATTTCTCCCAC-TGAAAGTTGCATCCAAGGACCCAACATCTTTTCATCATATGGCACACCTCAGaaaacaaa--a i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1731170 211 - 3144229 CCCCGACTTAGGGCCTATTCCCTTCCCCATTTCCTGTTACACTTGCCCCAGAAACA--TTTATAGTCGAAAACGAGGACTGA-GTGTGTCTCGTCAGAAGAACCACCTGGTTCTCCTGCAGAATCACAGCCCAGGATGAAA---CATTTCTCCCAC-TGAAAGTTGCATCCAAGGACCCAACATCTTTTCATCATATGGCACACCTCAGaaaacaaa--a i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 1685293 211 - 98384682 CCCCAACTTAGGGCCTATTCCCTTCCCCATTTCCTGTTACACTTGCCCCAGAAACA--TTTATAGTCGAAAACGAGGACTGA-GTGTGTCTCGTCAGAAGAACCACCGGGTTCTCCTGCAGAATCACAGCCCAGGATGAAA---CATTTCTCCCAC-TGAAAGTTGCATCCAAGGACCCAACATCTTTTCATCATATGGCACGCCTCAGaaaacaaa--a i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 2622012 211 + 10857215 CCCTGACTTAGGGCCTATTCCCTTCCCCATTTCCTGTTACACTTGCCCCAGAAACA--TTTATAGTCGAAAACGAGGACTGA-GTGTGTCTCGTCAGAAGAACCACCTGGTTCTCCTGCAGAATCACAGCCCAGGATGAAA---CATTTCTCCCAA-TGAAAGTTGCATCCAAGGACCCAACATCTTTTCATCATATGGCACACCTCAGaaaacaaa--a i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 7876026 210 + 23502949 CCCCAACTTAGGGCCTATTCCCTTCCCCATTTCCTGTTACACTTCCCCCAGAAACA--TTTACAGTCGAAAACGAGGACTGA-GTGTGTCTCGTCAAAAGAACCACCTGGTTCTCCTGCAGAATCACAGCCCAGGATGAAA---CATTTCTCCCAC-TGAAAGTTGAATCCAAGGACTCAATATCTTTTCATCATATGGCACACCTCAGAGAA-AAA--A i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 1723629 209 - 171630274 CCCTGAATTCGGGCCCATTCCCTTCCCCACTCACTGTTACCCTTCCCTCAAAAACA--CTTATCTTAGAAGACCAGGACTGA-GTGTATCTCATCAGAAGAGCCA-CTTGTTTTCCTGTAGAATCACAGCCCA-GATGAAAG--CATTTCTCCCAC-TGGAAGTTGAATTCAAGGACCCAGCATCTTTTCATCACATGGCACACCTCAGAAAATAAA--- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1594954 208 + 2905041 CCCTGAATTCGGGCCCTTTCCCTTCCCCACTCACTGTGACC--TCCCTCAAAAACA--TTTACCTTAGAAGACGAGGACTGA-GTATATCTCGTCAGAAGACCCACCTTGCTCTTCTGCAGAATCACAGCCCA-GATGAAAG--CATTTCTCCCAC-TGGAAGTTGAATTCAAGGACCCAGCATCTTTTCATCATATGACACACCTCAGAAAACAAA--- i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 892269 211 + 2164891 CCCTGAATTCGGGCCCATTCCCTTCCCCACTCAGTGTGACCCTTCCCTCAAAAACA--TTTACCTTAGAAGACGAGGACTGA-GTGCATCTCGTCAGAAGACCCACCTTGTTCTCCTGCAGAATCACAGCCCA-GATGAAAG--CATTTCTCCCAC-TGGAAGTTGAATTCAAGGACCCAGCATCTTTTCATCACATGGCACACCTCAGAAAACAAAA-- i cebCap1.NW_016107695v1 n 1434 n 1434 s aotNan1.NW_018494782v1 292908 211 + 1813869 CCCTGAATTCGGGCCCATTCCCTTCCCCACTCACTGTTACCCTTCCCTCAAAAACG--TTTACCTTAGAAGACGAGGATTGA-GTGTATCTCACCAGAAGAACCACCTTGTTCTCCTGCAGAATCACAGCTCA-GGTGAAAG--CATTTCTCCCAC-TGGAAGTTGAATTCAAGGACCCAGCATCTTTCCATCATATGGCACAGCTCAGAAAACAAA-A- i aotNan1.NW_018494782v1 n 1490 n 1490 s otoGar3.GL873575 1111086 210 + 12073884 -CCCAGCT--GGCCCTGCTTCCCTCCCCTCTGACTGTCACCCTCCCCTGGAAAGTAATTTTGGAGTAGAAAATCAAGGTCAATGTGTGTCCCATCAGAAGA---ATCCGCTTCTCC--CAGAGTCACAGCCCATGATTAAAGCACATTTTTCTCACACGAGATTTGAACTTAAGAATCAAACATCTTTTCATCATTTGGCACACCTCTaaaagcaaa--a i otoGar3.GL873575 C 0 C 0 e dasNov3.JH569188 588115 1077 + 760995 I e canFam3.chr1 56188039 1339 + 122678785 I a score=454211.000000 s hg38.chr6_KB021644v2_alt 121647 69 + 185823 ------AC-AAAA----AGTACAGAGAGAAAAG-CAAACCCAGCGTCACCCACCTCGC----CCGAGAGCCG-----TGCTCACTAGAGG s panTro5.chr6 173577878 69 + 175400573 ------AC-AAAA----AGTACAGAGAGAAAAG-CAAACCCAGCGTCACCCACCTCGC----CCGAGAGCCG-----TGCCCACTAGAGG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171811296 69 + 173848474 ------AC-AAAA----AGTACAGAGAGAAAAG-CAAACCCAGTGTCACCCACCTCGC----CCAAGAGCCG-----TGCTCACTAGAGG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11494345 69 - 12463322 ------AC-AAAA----AGTACAGAGAGAAAAG-CAAACCCAGCGTCACCCACCTCGC----CCGAGAGCCG-----TGCTCACTAGAGG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156323239 69 + 157873769 ------AC-AAAA----AATGCAGACAGAAAAG-CAAACCCAGCGTCACCCACCTCGC----CCAAGAGCTG-----TGCTCACTAGAGG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 2236451 70 - 172585720 ------ACAAAAA----AATACGGACAGAAAAG-CAAACCCAGCGTCACCCACCTCGC----CCGAGAGTGG-----TGCTCACTGGAAG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 1860560 70 + 170955103 ------acaaaaa----aatacagacagaaaag-caaaCCCAGCGTCACCCATCTCGC----CCGAGAGTGG-----TGCTCACTGGAAG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 1780495 70 - 10161646 ------acaaaaa----aatacagacagaaaag-caaaCCCAGCGTCACCCACCTCGC----CCGAGAGTGG-----TGCTCACTGGAAG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1731381 70 - 3144229 ------acaaaaa----aatacagacagaaaag-caaaCCCAGCGTCACCCACCTCGC----CCGAGAGTGG-----TGCTCACTGGAAG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 1685504 70 - 98384682 ------acaaaaa----aatacagacagaaaag-caaaCCCAGCGTCACCCACCTCAC----CCATGAGTGG-----TGCTCACTGGAAG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 2622223 70 + 10857215 ------acaaaaa----aatacagacagaaaag-caaaCCCAGCGTCACCCACCTCGC----CCGAGAGTGG-----TGCTCACTGGAAG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 7876236 70 + 23502949 ------ACAAAAA----AATACAGACAGAAAAG-CAAACCCAGCGTCACCCACCTCAC----CGGAGAGCGG-----TGCTCACTGGAAG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 1723838 66 - 171630274 ------------------ACAGAGACAGAAAAG-CAAACCCAGCGCCACCCATCTTGC----CTGAGAGAGGGGCACTGCTCACTGG-GG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1595162 68 + 2905041 ------------A----CACACAGACAGAAAAG-CAAACCCAGCGCCACCCAAGTTGC----CTGAGAGCAGGGCACTGCTCACTGG-GG i saiBol1.JH378287 C 0 C 0 s otoGar3.GL873575 1111296 85 + 12073884 acaaaaacaaaaaATATAATACAAGCAAAAAAGCCAACCCCAGGCCCACCCACCTTGTGAAGTAGAGAGCAG-----CGCGCATTTCAGG i otoGar3.GL873575 C 0 n 0 e aotNan1.NW_018494782v1 293119 1490 + 1813869 I e cebCap1.NW_016107695v1 892480 1434 + 2164891 I e dasNov3.JH569188 588115 1077 + 760995 I e canFam3.chr1 56188039 1339 + 122678785 I a score=116118.000000 s hg38.chr6_KB021644v2_alt 121716 15 + 185823 CCAGGTGCCTCATTC s panTro5.chr6 173577947 15 + 175400573 CCAGGTGCCTCATTC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171811365 15 + 173848474 CCAGGTGCCTCATTC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11494414 15 - 12463322 CCAGGTGCCGCATTC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156323308 15 + 157873769 CCAGGTGCCTCATTC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 2236521 15 - 172585720 CCAGGTGCCTCATTC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 1860630 15 + 170955103 ACAGGTGCCTCATTC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 1780565 15 - 10161646 ACAGGTGCCTCATTC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1731451 15 - 3144229 CCAGGTGCCTCATTC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 1685574 15 - 98384682 CCAGGTGCCTCATTC i chlSab2.chr13 C 0 n 0 s manLeu1.NW_012106474v1 2622293 15 + 10857215 CCAGGTGCCTCATTC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 7876306 15 + 23502949 CCAGGTGCCTCATTC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 1723904 15 - 171630274 CCAGGTGCTTCACTC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1595230 15 + 2905041 CCAGGTGCTTCGCTC i saiBol1.JH378287 C 0 C 0 e otoGar3.GL873575 1111381 0 + 12073884 I e aotNan1.NW_018494782v1 293119 1490 + 1813869 I e cebCap1.NW_016107695v1 892480 1434 + 2164891 I e dasNov3.JH569188 588115 1077 + 760995 I e canFam3.chr1 56188039 1339 + 122678785 I a score=4951.000000 s hg38.chr6_KB021644v2_alt 121731 2 + 185823 CT s panTro5.chr6 173577962 2 + 175400573 CT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171811380 2 + 173848474 CT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11494429 2 - 12463322 CT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156323323 2 + 157873769 CG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 2236536 2 - 172585720 CG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 1860645 2 + 170955103 CG i macFas5.chr4 C 0 n 0 s macNem1.NW_012011000v1 1780580 2 - 10161646 CG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1731466 2 - 3144229 CG i cerAty1.NW_012002071v1 C 0 C 0 s manLeu1.NW_012106474v1 2622308 2 + 10857215 CG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 7876321 2 + 23502949 CG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 1723919 2 - 171630274 TG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1595245 2 + 2905041 TG i saiBol1.JH378287 C 0 C 0 e otoGar3.GL873575 1111381 0 + 12073884 I e aotNan1.NW_018494782v1 293119 1490 + 1813869 I e cebCap1.NW_016107695v1 892480 1434 + 2164891 I e dasNov3.JH569188 588115 1077 + 760995 I e canFam3.chr1 56188039 1339 + 122678785 I e chlSab2.chr13 1685589 0 - 98384682 I a score=13326.000000 s hg38.chr6_KB021644v2_alt 121733 2 + 185823 tc s panTro5.chr6 173577964 2 + 175400573 tc i panTro5.chr6 C 0 C 0 s panPan2.chr6 171811382 2 + 173848474 tc i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11494431 2 - 12463322 tc i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156323325 2 + 157873769 tc i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 2236538 2 - 172585720 TC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169095220 2 - 170955103 tt i macFas5.chr4 I 1345 C 0 s macNem1.NW_012011000v1 1780582 2 - 10161646 TC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1731468 2 - 3144229 TC i cerAty1.NW_012002071v1 C 0 C 0 s manLeu1.NW_012106474v1 2622310 2 + 10857215 TC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 7876323 2 + 23502949 TC i colAng1.NW_012114488v1 C 0 n 0 s calJac3.chr4 1723921 2 - 171630274 TC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1595247 2 + 2905041 TC i saiBol1.JH378287 C 0 C 0 e otoGar3.GL873575 1111381 0 + 12073884 I e aotNan1.NW_018494782v1 293119 1490 + 1813869 I e cebCap1.NW_016107695v1 892480 1434 + 2164891 I e dasNov3.JH569188 588115 1077 + 760995 I e canFam3.chr1 56188039 1339 + 122678785 I e chlSab2.chr13 1685589 0 - 98384682 I a score=4909.000000 s hg38.chr6_KB021644v2_alt 121735 1 + 185823 g s panTro5.chr6 173577966 1 + 175400573 g i panTro5.chr6 C 0 C 0 s panPan2.chr6 171811384 1 + 173848474 g i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11494433 1 - 12463322 g i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156323327 1 + 157873769 g i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 2236540 1 - 172585720 G i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169095222 1 - 170955103 g i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 1780584 1 - 10161646 G i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1731470 1 - 3144229 G i cerAty1.NW_012002071v1 C 0 C 0 s manLeu1.NW_012106474v1 2622312 1 + 10857215 G i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15627392 1 - 23502949 g i colAng1.NW_012114488v1 I 1343 C 0 s calJac3.chr4 1723923 1 - 171630274 A i calJac3.chr4 C 0 n 0 s saiBol1.JH378287 1595249 1 + 2905041 A i saiBol1.JH378287 C 0 n 0 e otoGar3.GL873575 1111381 0 + 12073884 I e aotNan1.NW_018494782v1 293119 1490 + 1813869 I e cebCap1.NW_016107695v1 892480 1434 + 2164891 I e dasNov3.JH569188 588115 1077 + 760995 I e canFam3.chr1 56188039 1339 + 122678785 I e chlSab2.chr13 1685589 0 - 98384682 I a score=20055.000000 s hg38.chr6_KB021644v2_alt 121736 2 + 185823 ct s panTro5.chr6 173577967 2 + 175400573 ct i panTro5.chr6 C 0 C 0 s panPan2.chr6 171811385 2 + 173848474 ct i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11494434 2 - 12463322 ct i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156323328 2 + 157873769 ct i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 2236541 2 - 172585720 CT i rheMac8.chr4 C 0 n 0 s macFas5.chr4 169095223 2 - 170955103 ct i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 1780585 2 - 10161646 CT i macNem1.NW_012011000v1 C 0 n 0 s cerAty1.NW_012002071v1 1731471 2 - 3144229 CT i cerAty1.NW_012002071v1 C 0 n 0 s manLeu1.NW_012106474v1 2622313 2 + 10857215 CT i manLeu1.NW_012106474v1 C 0 n 0 s colAng1.NW_012114488v1 15627393 2 - 23502949 ct i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169907100 2 + 171630274 ct i calJac3.chr4 I 1690 C 0 s saiBol1.JH378287 1310554 2 - 2905041 ct i saiBol1.JH378287 I 1455 C 0 s cebCap1.NW_016107695v1 1273089 2 - 2164891 ct i cebCap1.NW_016107695v1 I 1434 C 0 s aotNan1.NW_018494782v1 1521430 2 - 1813869 ct i aotNan1.NW_018494782v1 I 1490 C 0 e otoGar3.GL873575 1111381 0 + 12073884 I e dasNov3.JH569188 588115 1077 + 760995 I e canFam3.chr1 56188039 1339 + 122678785 I e chlSab2.chr13 1685589 0 - 98384682 I a score=7360.000000 s hg38.chr6_KB021644v2_alt 121738 3 + 185823 tga s panTro5.chr6 173577969 3 + 175400573 tga i panTro5.chr6 C 0 C 0 s panPan2.chr6 171811387 3 + 173848474 tga i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11494436 3 - 12463322 tga i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156323330 3 + 157873769 gga i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169095225 3 - 170955103 tcc i macFas5.chr4 C 0 C 0 s colAng1.NW_012114488v1 15627395 3 - 23502949 tca i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169907102 3 + 171630274 tga i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1310556 3 - 2905041 tga i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1273091 3 - 2164891 tga i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1521432 3 - 1813869 tga i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 1111381 0 + 12073884 I e dasNov3.JH569188 588115 1077 + 760995 I e canFam3.chr1 56188039 1339 + 122678785 I e chlSab2.chr13 1685589 0 - 98384682 I e cerAty1.NW_012002071v1 1731473 0 - 3144229 I e manLeu1.NW_012106474v1 2622315 0 + 10857215 I e macNem1.NW_012011000v1 1780587 0 - 10161646 I e rheMac8.chr4 2236543 0 - 172585720 I a score=16324.000000 s hg38.chr6_KB021644v2_alt 121741 3 + 185823 acc s panTro5.chr6 173577972 3 + 175400573 acc i panTro5.chr6 C 0 C 0 s panPan2.chr6 171811390 3 + 173848474 acc i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11494439 3 - 12463322 acc i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156323333 3 + 157873769 acc i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169095228 3 - 170955103 act i macFas5.chr4 C 0 C 0 s chlSab2.chr13 96699863 3 + 98384682 acc i chlSab2.chr13 I 1353 C 0 s colAng1.NW_012114488v1 15627398 3 - 23502949 acc i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169907105 3 + 171630274 atc i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1310559 3 - 2905041 acc i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1273094 3 - 2164891 acc i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1521435 3 - 1813869 acc i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 1111381 0 + 12073884 I e dasNov3.JH569188 588115 1077 + 760995 I e canFam3.chr1 56188039 1339 + 122678785 I e cerAty1.NW_012002071v1 1731473 0 - 3144229 I e manLeu1.NW_012106474v1 2622315 0 + 10857215 I e macNem1.NW_012011000v1 1780587 0 - 10161646 I e rheMac8.chr4 2236543 0 - 172585720 I a score=7291.000000 s hg38.chr6_KB021644v2_alt 121744 2 + 185823 cg s panTro5.chr6 173577975 2 + 175400573 cg i panTro5.chr6 C 0 C 0 s panPan2.chr6 171811393 2 + 173848474 cg i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11494442 2 - 12463322 ca i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156323336 2 + 157873769 ga i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170349958 2 + 172585720 cg i rheMac8.chr4 I 1357 C 0 s macFas5.chr4 169095231 2 - 170955103 cg i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8381840 2 + 10161646 cg i macNem1.NW_012011000v1 I 1357 C 0 s chlSab2.chr13 96699866 2 + 98384682 tg i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15627401 2 - 23502949 cg i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169907108 2 + 171630274 ca i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1310562 2 - 2905041 ca i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1273097 2 - 2164891 ca i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1521438 2 - 1813869 ca i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 1111381 0 + 12073884 I e dasNov3.JH569188 588115 1077 + 760995 I e canFam3.chr1 56188039 1339 + 122678785 I e cerAty1.NW_012002071v1 1731473 0 - 3144229 I e manLeu1.NW_012106474v1 2622315 0 + 10857215 I a score=568710.000000 s hg38.chr6_KB021644v2_alt 121746 61 + 185823 ggaggcggaggttgcagtgagctgagatcgcgccactgcactccagcctgggcaacagaac s panTro5.chr6 173577977 61 + 175400573 ggaggcggaggttgcagtgagctgagattgtgccactgcactccagcctgggcaacagaac i panTro5.chr6 C 0 C 0 s panPan2.chr6 171811395 61 + 173848474 ggaggcggaggttgcagtgagctgagattgcgccactgcactccagcctgggcgacagaac i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11494444 61 - 12463322 ggaggcggaggttgcagtgagctgagatcgcgccactgcactccagcctgggcaacagaac i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156323338 61 + 157873769 ggaggcggaggttgcagtgagctgagatggtgtcactgcactccagcccgggcgacagaac i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170349960 61 + 172585720 ggaggtggaggtggcactgagctgagatctcgccaccgcactccagcctgggcgacagagc i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169095233 61 - 170955103 ggaggtggaggtggcactgagctgagatctcgccaccgcactccagcctgggcgacagagc i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8381842 61 + 10161646 ggaggtggaggtggcactgagctgagatctcgccaccgcactccagcctgggcgacagagc i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1413540 61 + 3144229 ggaggtggaggtggcactgagctgagatcgcgccaccacactccagcctgggcgacagagc i cerAty1.NW_012002071v1 I 1359 C 0 s chlSab2.chr13 96699868 61 + 98384682 ggaggtggaggtggcaatgagctgagattgtgccaccgcactccagcctgggcgacagagc i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8235684 61 - 10857215 ggaggtggaggtggcactgagctgagatcgcgccaccacactccagcctgggcgacagagc i manLeu1.NW_012106474v1 I 1359 C 0 s colAng1.NW_012114488v1 15627403 61 - 23502949 ggaggtggaagttgcagtaagctgagatcacgccaccacactccagcctgggcaacagagc i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169907110 61 + 171630274 ggaggtggagtttgcagtgagctgagatcacgccattgcactccagcctggatgacagagc i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1310564 61 - 2905041 ggaggtggagtttgcagtaagctgagatcacaccactgcactccactctggatgaaagagc i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1273099 61 - 2164891 ggaggtagagtttgcagtgagctgagatcaccccattgcactccagcctggatgacagagc i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1521440 61 - 1813869 ggaggtggagtttgcagtgagctgagatcacaccattgcactccagcctggatgacagagc i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 1111381 0 + 12073884 I e dasNov3.JH569188 588115 1077 + 760995 I e canFam3.chr1 56188039 1339 + 122678785 I a score=206007.000000 s hg38.chr6_KB021644v2_alt 121807 25 + 185823 aagactccatct-caaaaaa-------aaaaaa s panTro5.chr6 173578038 25 + 175400573 aagactccatct-caaaaaa-------aaaaaa i panTro5.chr6 C 0 C 0 s panPan2.chr6 171811456 26 + 173848474 aagactccatctacaaaaaa-------aaaaaa i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11494505 25 - 12463322 aagactccatct-caaaaaa-------aaaaaa i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156323399 25 + 157873769 aagactccatct-caaaaaa-------aaaaaa i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170350021 31 + 172585720 aagattccatct-caaaaaa-atacataaataa i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169095294 31 - 170955103 aagattccatct-caaaaaa-atacataaataa i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8381903 31 + 10161646 aagattccatct-caaaaaa-atacataaataa i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1413601 31 + 3144229 aagactccatct-caaaaaa-atacataaataa i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96699929 31 + 98384682 aagactccatct-caaaaaa-atacataaataa i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8235745 31 - 10857215 aagactccatct-caaaaaa-atacataaataa i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15627464 31 - 23502949 aagactccatct-caaaaaa-atacataaataa i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169907171 25 + 171630274 aagactccatct-caaaaaa-------aaaaaa i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1310625 25 - 2905041 aagactccatct-caaaaaa-------aaaaaa i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1273160 25 - 2164891 aggattccatct-caaaaaa-------aaaaaa i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1521501 23 - 1813869 aagactctgtct-caaaaaa-------aaag-- i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10963050 26 - 12073884 agaaatccaacc-cacaaaatgtttgt------ i otoGar3.GL873575 I 1130 C 0 e dasNov3.JH569188 588115 1077 + 760995 I e canFam3.chr1 56188039 1339 + 122678785 I a score=7098.000000 s hg38.chr6_KB021644v2_alt 121832 1 + 185823 a s panTro5.chr6 173578063 1 + 175400573 a i panTro5.chr6 C 0 C 0 s panPan2.chr6 171811482 1 + 173848474 a i panPan2.chr6 C 0 I 251 s gorGor5.CYUI01015032v1 11494530 1 - 12463322 a i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156323424 1 + 157873769 a i nomLeu3.chr3 C 0 I 7 s rheMac8.chr4 170350052 1 + 172585720 a i rheMac8.chr4 C 0 I 1 s macFas5.chr4 169095325 1 - 170955103 a i macFas5.chr4 C 0 I 1 s macNem1.NW_012011000v1 8381934 1 + 10161646 a i macNem1.NW_012011000v1 C 0 I 1 s cerAty1.NW_012002071v1 1413632 1 + 3144229 a i cerAty1.NW_012002071v1 C 0 I 1 s chlSab2.chr13 96699960 1 + 98384682 a i chlSab2.chr13 C 0 I 1 s manLeu1.NW_012106474v1 8235776 1 - 10857215 a i manLeu1.NW_012106474v1 C 0 I 1 s colAng1.NW_012114488v1 15627495 1 - 23502949 a i colAng1.NW_012114488v1 C 0 I 1 s dasNov3.JH569188 589192 1 + 760995 a i dasNov3.JH569188 I 1077 C 0 e otoGar3.GL873575 10963076 0 - 12073884 C e saiBol1.JH378287 1310650 0 - 2905041 C e aotNan1.NW_018494782v1 1521524 0 - 1813869 C e cebCap1.NW_016107695v1 1273185 0 - 2164891 C e calJac3.chr4 169907196 0 + 171630274 C e canFam3.chr1 56188039 1339 + 122678785 I a score=28160.000000 s hg38.chr6_KB021644v2_alt 121833 10 + 185823 aaaa----------GTTATA s panTro5.chr6 173578064 20 + 175400573 aaaaaaaaaaaaaaGTTATG i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11494531 8 - 12463322 ------------aaGTTATG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156323432 20 + 157873769 aaaaaaaaaaCAAAGTTATG i nomLeu3.chr3 I 7 C 0 s rheMac8.chr4 170350054 10 + 172585720 ----------aaaaGTTATG i rheMac8.chr4 I 1 C 0 s macFas5.chr4 169095327 10 - 170955103 ----------aaaagttatg i macFas5.chr4 I 1 C 0 s macNem1.NW_012011000v1 8381936 10 + 10161646 ----------aaaagttatg i macNem1.NW_012011000v1 I 1 C 0 s cerAty1.NW_012002071v1 1413634 10 + 3144229 ----------aaaagttatg i cerAty1.NW_012002071v1 I 1 C 0 s chlSab2.chr13 96699962 10 + 98384682 ----------aaaagttatg i chlSab2.chr13 I 1 C 0 s manLeu1.NW_012106474v1 8235778 10 - 10857215 ----------aaaagttatg i manLeu1.NW_012106474v1 I 1 C 0 s colAng1.NW_012114488v1 15627497 10 - 23502949 ----------aaaagttatg i colAng1.NW_012114488v1 I 1 C 0 s calJac3.chr4 169907196 8 + 171630274 ------------GAGGTATA i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1310650 8 - 2905041 ------------aagttgta i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1273185 5 - 2164891 ---------------TTATA i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1521524 5 - 1813869 ---------------ttata i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10963076 10 - 12073884 ----------aaatgccatg i otoGar3.GL873575 C 0 C 0 s dasNov3.JH569188 589193 10 + 760995 ----------aaatgccatg i dasNov3.JH569188 C 0 C 0 e canFam3.chr1 56188039 1339 + 122678785 I e panPan2.chr6 171811483 251 + 173848474 I a score=716801.000000 s hg38.chr6_KB021644v2_alt 121843 69 + 185823 ATCG---------TTTGTGAATACAC-AAGTGAAA--Tttttgtaggtgaatgagtaaaccttta-----ttaaagtttgcagtaa- s panTro5.chr6 173578084 69 + 175400573 ATCG---------TTTGTGAATACAC-AAGTGAAA--Tttttgtaggtgaatgagtaaatcttta-----ttaaagtttgcagtaa- i panTro5.chr6 C 0 C 0 s panPan2.chr6 171811734 69 + 173848474 ATCG---------TTTGTGAATACAC-AAGTGAAA--Tttttgtaggtgaatgagtaaaccttta-----ttaaagtttgcagtaa- i panPan2.chr6 I 251 C 0 s gorGor5.CYUI01015032v1 11494539 69 - 12463322 ATCG---------TTTGTGAATACAC-AAGTGAAA--Tttttgtaggtgaatgagtaaaccttta-----ttaaagtttgcagtaa- i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156323452 74 + 157873769 ATCG---------TTTGTGAATACAC-AAGTGAAA--gttttgcaggtgaatgagtaaacctttattaatttaaagtttgcagtaa- i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170350064 74 + 172585720 ATCG---------TTTGTGAGTACAC-AAGTGAAA--Tttttgtaggtgaatgagtaaacctttattaatttaaagtttgcagtca- i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169095337 74 - 170955103 atcg---------tttgtgagtacac-aagtgaaa--tttttgtaggtgaatgagtaaacctttattaatttaaagtttgcagtca- i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8381946 74 + 10161646 atcg---------tttgtgagtacac-aagtgaaa--tttttgtaggtgaatgagtaaacctttattaatttaaagtttgcagtca- i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1413644 74 + 3144229 atcg---------tttgtgggtatac-aagtgaaa--tttttgtaggtgaatgagtaaacctttattaatttaaagtttgcagtca- i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96699972 74 + 98384682 atcg---------tttgtgagtacac-aagtgaaa--tttttgtaggtgaatgagtaaatctttattaatttaaagtttccagtca- i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8235788 74 - 10857215 atcg---------tttgtgggtacac-aagtgaaa--tttttgtaggtgaatgagtaaacctttattaatttaaggtttgcagtca- i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15627507 74 - 23502949 atca---------tttgtgagtacac-aagtgaaa--tttttgtaggtgaatgagtaaacctttattaatttaaagtttgcagtca- i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169907204 75 + 171630274 ATTGTTTGTGAGTTTTGTGAGTACACAAAGTGGAA--TCTTCGTTGGTGAA---------Ctttattaatttaaagatagcagtaa- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1310658 75 - 2905041 attg---------cttgcgagtacacaaagtgaaa--tttttgttggtgaatgagtaaacctttattaatttaaagtttgcagtaa- i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1273190 75 - 2164891 ATTG---------TTTGTGAGTACACAAAGTGAAA--Tttttgttggtgactgagtaaacctttattaatttaaagtttgcagtaa- i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1521529 75 - 1813869 attg---------tttgtgaggacacaaagtgaaa--tttttgttgttgaatgagtaaacctttattaatttaaagtttgcagtaa- i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10963086 77 - 12073884 gtag---------tttgtaaatatgtaaagtaaaacctttttgtcagtaaatcgtttaacttatattaatctaaattttgcattaa- i otoGar3.GL873575 C 0 I 3 s dasNov3.JH569188 589203 76 + 760995 ccag---------tttgtgaatacataaagtgaaa-ctctttgtggataatgaattaaacacttattaa-ttaaaatttgtagttac i dasNov3.JH569188 C 0 C 0 e canFam3.chr1 56188039 1339 + 122678785 I a score=867664.000000 s hg38.chr6_KB021644v2_alt 121912 80 + 185823 cttttcctgtttgggagccaataaaattgtgttcaga-----aacatttccgtagactcttgaagagcttgtagcagcaaaagaa s panTro5.chr6 173578153 80 + 175400573 cttttcctgtttgggagccaataaaattgtgttcaga-----aacatttccgtagactcttgaagagcttgtagCAGCAAAAGAA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171811803 80 + 173848474 cttttcctgtttgggagccaataaaattgtgttcaga-----aacatttccgtagactcttgaagagcttgtagCAGCAAAAGAA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11494608 80 - 12463322 cttttcctgtttcagagccaataaaattgtgttcaga-----aacatttccgtagactcttgaagagcttgtaACAGCAAAAGAA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156323526 80 + 157873769 cttttcctgtttgggagccaataaaattgtgttcaaa-----aacatttccgtaaactcttgaagagctcatagctgcaaaagaa i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170350138 80 + 172585720 cttttgctgtccgggagccaataaaattgtgttcaga-----aacatttccgtagactcttaaagagctcgtagCAGCAAAAGAA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169095411 80 - 170955103 cttttgctgtccgggagccaataaaattgtgttcaga-----aacatttccgtagactcttaaagagctcgtagCAGCAAAAGAA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8382020 80 + 10161646 cttttgctgtccgggagccaataatattgtgttcaga-----aacatttccatagactcttaaagagctcgtagCAGCAAAAGGA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1413718 80 + 3144229 cttttgctgtccaggagccaataaaattgtgttcaga-----aacatttccgtagactcttaaagagctcgtagCAGCAAAAGAA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96700046 80 + 98384682 cttttgctgtccaggagccaataaaattgtgttcaga-----aacatttccgtagactcttaaagagctcgtagCAGCAACAGAA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8235862 80 - 10857215 cttttgctgtccgggagccaataaaattgtgttcaga-----aacatttccgtagactcttaaacagctcgtagcagcgaaagaa i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15627581 79 - 23502949 ctttggct-ttcgggagccaataaaattgtgttcaga-----aacatttccgtaggctcttgaagagctcgtagCAGCGAAAGAA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169907279 79 + 171630274 catttcctgcttgggagccaa-gaaactgtgtttgga-----aacagttccatagactctggaagagtttgtaggagcaaaagcc i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1310733 80 - 2905041 cctttcctgtttgggaaccaataaaattgtgtttgga-----aacatttccatagactcttgaagagctcgcaggAGCAGAAGCC i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1273265 80 - 2164891 catttcctgtttgggagccaataaaattgtatttgga-----aacatttccatagactcttgaagagcttgtaggagcaaaagcc i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1521604 80 - 1813869 catttcctgtttggaagccaataaaattgtgtttgga-----aacatttccatagactcttgaagagcttgtaggAGCAAAAGCC i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10963166 85 - 12073884 cttttcctgttctggagccaataacattgttttcaaagcttggacattttaacagactcttggaaagattgtaggAGCAAAGGGA i otoGar3.GL873575 I 3 C 0 s canFam3.chr1 56189378 65 + 122678785 CTGTCCCTGTTCGGG-GTTGACTAAGTTGTTTTTAAACTTCAGACATTGCAGTAGACCCTTG-------------------AGTA i canFam3.chr1 I 1339 C 0 s dasNov3.JH569188 589279 85 + 760995 cttttcctcttttggagccaataaatttgtgtttaagccccaagcattttaacagacccttaaaaagcttgtgggAACAAAAGAA i dasNov3.JH569188 C 0 I 102 a score=874981.000000 s hg38.chr6_KB021644v2_alt 121992 129 + 185823 tcgtgtgtgtagtg-c--ctG---CACCACTGCCCGGGGCTGACCTCACCTGTGCCTCTGGGCCCCTCCgtaggaggatggacgacggcccttgaagatctgcgcgtctccaccc------------acctaggaacctgcgctttt---- s panTro5.chr6 173578233 129 + 175400573 TCGTGTGTGTAGTG-C--GTG---CACCACTGTCCGGGGCTGACCTCACCTGTGCCTCTGGGCCCCTCCgtaggaggatggacgacggcccttgaagatctgcgcgtctccaccc------------acctaggaacctgcactttt---- i panTro5.chr6 C 0 C 0 s panPan2.chr6 171811883 129 + 173848474 TCGTGTGTGTAGTG-C--GTG---CACCACTGTCCGGGGCTGACCTCACCTGTGCCTCTGGGCCCCTCCgtaggaggatggacgacggcccttgaagatctgcgcgtctccaccc------------acctaggaacctgcgctttt---- i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11494688 131 - 12463322 TCGTGTGTGTAGTG-CCGCGG---CACCACTGTCCGGGGCTGACCTCACCTGTGCCTCTGGGCCCCTCCgtaggaggatggatgacagcccttgaagatctgcgcgtctccaccc------------acctaggaacctgcgttttt---- i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156323606 129 + 157873769 tcgtgcgtgtagtg-c--ctG---CAGCACTGTCGGGGGCTGACCTCACCTGTGTCTCCGGGCCCCTCCGTAGGGGGATGGACGACGGCCCTGGAAGATCTGCGCGTCTCCAcct------------acctgggaacctgcgttttt---- i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170350218 128 + 172585720 TCATGTGTGTAGTG-C--CTG---CACCGCTGTCCGTGGCTGACCGCATCAGTGTCTCT-GGCCCCTCCATAGGAGGATGAACGATGTCCCTTGAAGATCTGTTTGTCTCCACCT------------ACCTAGAGACCTGCattttt---- i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169095491 128 - 170955103 TCATGTGTGTAGTG-C--CTG---CACCGCTGTCCGTGGCTGACCGCACCAGTGTCTCT-GGCCCCTCCATAGGAGGATGGACGATGGCCCTTGAAGATCTGTTTGTCTCCACCT------------ACCTAGAGACCTGCattttt---- i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8382100 128 + 10161646 TCATGTGTGTAGTG-C--CTG---CACCGCTGTCCGTGGCTGACCGCACCAGTGTCTCT-GGCCCCTCCATAGGAGGATGGACGATGGCCCTTGAAGATCTGTTTGTCTCCACCT------------ACCTAGAGACCTGCattttt---- i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1413798 128 + 3144229 TCATGTGTGTAATG-C--CTG---CACCGCTGTCCGTGGCTGACCGCACCTGTGTCTCT-GGCCCCTCCATAGAaggatggacgatggcccttaaagatttgtgtgtctccacct------------acctagagacctgtgttttt---- i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96700126 128 + 98384682 TCATGTGTGTAGTG-C--CTG---CACCGCTGTCCGTGGCTGACCCCACCTGTGTCTCT-GGCCCCTCCATAGGAGGAGGGACGATGGCCCTTGAAGATCTGTGTGTCTCCACCT------------ACCTAgaaacctgcgttttt---- i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8235942 128 - 10857215 tcgtgtgtgtagtg-c--ctG---CACCGCTGTCCGCGGCCGACCGCACCTGTGCCTCT-GGCCCCTCCATAGGaggatggacgatggcccttgaagatctgtgtgtctccacct------------acctagagacctgtgttttt---- i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15627660 129 - 23502949 TCACGTGTGTAGTG-C--CTG---CACCGCTGTCCGCGGCTGGCCGCACCTGTGTCTCTGGGCCCCTCCATAGGAGGACGGACGATGGCCCTTGAAGATCTGTGCGTCTCCACCT------------ACCTAGAGACCTACGTTttt---- i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169907358 142 + 171630274 a-gtgcctgcagtgAG--ATGAGCCACGGCC-TCCGGGGCTGGCCTCACCTGTGTCTCT-GGACTCCCCGCAGGGGAATGAGCCACGGCCCCTGGAGGTGGGCACCTCCCCACCTGCCTCGGAACCAGcctcggaacctgcatttct---- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1310813 121 - 2905041 GCGTGCATGCAGTG-G--CTG---CACAGCC-TCCGGGGCTGGCCTCGCCTGTGTCTCT-GGACTCCTCGCAGGGGAATGAGCCACGGC------------------TCCCACCTGCCTCAGAACCTGccttggaacctgcatttct---- i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1273345 139 - 2164891 ccgtgcatgcagtg-g--ctG---CACGGCC-TCCGGGGCTGGCCTCACCTGTGTCTCT-GGACTCTCTGCAGAGGGATGAGCCACGGCCCCTGGAGGTGTGCACGTCCCCACCTGCCTCGGAACCCAcctcagaacctgcatttct---- i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1521684 135 - 1813869 CCGTGCGTGCGGTG-G--CCG---CATGGCC-TCCGGG---GGCCTCACGTGTGTCTCA-GGACTC-CCGCAGGGGGATGAGCCACTGCCCCTGGAGGTGTGCACGTCCCCACCTGCCTTGGAACCCGcctcggaacctgcatttct---- i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10963251 97 - 12073884 CTGCGTGTGGAGCA-C--CCA---CTATGCT-----------------ACAGTTTCCCT---CCTCACTCTGGGAGGATGAACAGGGTCCCCAGTGAA-----------CCTcct-----------------gggacctgccaatccacca i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56189443 110 + 122678785 TTGTGCCTCCAATA-A--GTA---T-------CCTGGGGACAACCTTATCTGT-TCTGt----------atgggaggccgggtaatagtcacagg-gacggccccgtctgaaacc------------accgtagactgtgaatacgt---- i canFam3.chr1 C 0 C 0 e dasNov3.JH569188 589364 102 + 760995 I a score=373342.000000 s hg38.chr6_KB021644v2_alt 122121 34 + 185823 ccttacct----ggcaaaatggactctgcag-tgcaatt s panTro5.chr6 173578362 34 + 175400573 ccttacct----ggcaaaatggactctgcag-tgcaact i panTro5.chr6 C 0 C 0 s panPan2.chr6 171812012 34 + 173848474 ccttacct----ggcaaaatggactctgcag-tgcaatt i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11494819 34 - 12463322 ccttacct----ggcaaaatggactctgcag-tgcaatt i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156323735 34 + 157873769 ccttacct----ggcaaaatggactttgcag-tgcaatt i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170350346 34 + 172585720 ccttacct----ggcaaaatggactttgcag-tgcaatt i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169095619 34 - 170955103 ccttacct----ggcaaaatggactttgcag-tgcaatt i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8382228 34 + 10161646 ccttacct----ggcaaaatggactttgcag-tgcaatt i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1413926 34 + 3144229 ccttacct----ggcaaaatggactttgcag-tgcaatt i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96700254 34 + 98384682 ccttacct----gccaaaatggactttgcag-tgcaatt i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8236070 34 - 10857215 ccttacct----ggcaaaatggactttgcag-tgcaatt i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15627789 34 - 23502949 ccttacct----ggcaaaatggactttgcag-tgcaatt i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169907500 34 + 171630274 ccttgcct----ggtaacaaggaccttgcac-tgcaatt i calJac3.chr4 C 0 I 321 s saiBol1.JH378287 1310934 34 - 2905041 ccttacct----ggtaacaaggaccttgcag-ggcaatt i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1273484 34 - 2164891 ccttacct----ggtaacaaggaccttgcag-tgcaatt i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1521819 34 - 1813869 ccttacct----ggtagcaaggaccttgcgg-tgcagtt i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10963348 35 - 12073884 cctcataa----ggcaaaagggactttgcagatgagact i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56189553 38 + 122678785 ggtcagctccgaggcaggagggactttgcag-ggggttt i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 589466 35 + 760995 cctgacat----agcaaaaagcacatggcaggtgtgatg i dasNov3.JH569188 I 102 C 0 a score=4628005.000000 s hg38.chr6_KB021644v2_alt 122155 530 + 185823 aaattactgtttc----aagctgggaatctgctggtg--------------------------------------agatggggaggtgaccctg-----------------------------------------gcccatctgggggtgg------ggacg---ctgacac-------agggttctcatagcggggaggctggggatccaagtcaggaaaaggagctgtgaccccaaaaccagaggctgagg--------tg--------tgacgatgg-ggaaggggccgggagcccag--------ga-tgcagagagcctctcgcgctgggaaaggcagtaagagggattctccctcaaagctcc---------------gacacctggattttagacgcctggattttagacttccggcctgcagaactgtgaggggaccaatctgtgttgttttaagcagt-gatttgcagtgatttgttacagcagcaatggaaacaaatGAGCAGTCCTAGGATCTTCATC------CCAG----CT---GCTCCTGGGGTCTCAGGAT--GAGACGCGGGGCCC---GGTTCCCCTCACACAGGGTC-TCTGCTGGCCTCTG---------A---GGGCCCCTGTCCCAGACGAGGGG-CTTGGCTCACCTGCCCCCCTAACTTGGCCTCTTTCAACATGATGG s panTro5.chr6 173578396 530 + 175400573 aaattactgtttc----aagctgggaatctgctggtg--------------------------------------agacggggaggcgaccctg-----------------------------------------gcccatctgggggtgg------ggacg---ctgacac-------aggtttctcatagcggggaggctggggatccaagtcaggaaaaggagctgtgaccccagaaccagaggctgagg--------tg--------tgacgatgg-ggaaggggccgggagcccag--------ga-tgcagagagcctctcgctctgggaaaggcagtaagagggattctccctcaaagctcc---------------gatacctggattttagacgcctggattttagacttctggcctgcagaactgtgaggggaccaatctgtgttgttttaagcagt-gatttgcagtgatttgttacagcagcaatggaaacaaatGAGCAGTCCTAGGATCTTCATC------CCAG----CT---ACTCCTGGGGTCTCAGGAT--GAGACGCGGGGCCC---GGTCCCCCTCACGCAGGGTC-TCTGCTGGCCTCTG---------A---GGGCCCCTGTCCCAGACGAGGGG-CTTGGCTCACCTGCTCCCCTAACTTGGCCTCTTTCAACATGATGG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171812046 530 + 173848474 aaaatactgtttc----aagctgggaatctgctggtg--------------------------------------agacggggaggcgaccctg-----------------------------------------gcccatctgggggtgg------ggacg---ctgacac-------aggtttctcatagcggggaggctggggatccaagtcaggaaaaggagctgtgaccccagaatcagaggctgagg--------tg--------tgacgatgg-ggaaggggccgggagcccag--------ga-tacagagagcctctcgcgctgggaaaggcagtaagagggattctccctcaaagctcc---------------gatacctggattttaggcgcctggattttagacttctggcctgcagaactgtgaggggaccaatctgtgttgttttaagcagt-gatttgcagtgatttgttacagcagcaatggaaacaaatGAGCAGTCCTAGGATCTTCATC------CCAG----CT---ACTCCTGGGGTCTCAGGAT--GAGACGCGGGGCCC---GGTCCCCCTCACGCAGGGTC-TCTGCTGGCCTCTG---------A---GGGCCCCTGTCCCAGACGAGGGG-CTTGGCTCACCTGCCCCCCTAACTTGGCCTCTTTCAACATGATGG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11494853 530 - 12463322 aaattactgtttc----aagctgggaatctgctggtg--------------------------------------agacggggaggtgaccctg-----------------------------------------gcccatctgggggcgg------gaacg---ctgacac-------agggttctcatagcggggaggctggggatccaagacaggaaaaggagctgtgaccccagaaccagaggctgagg--------tg--------tgacgatgg-ggaaggggccgggagcccag--------ga-tgcagagagcctctcgcgctgggaaaggcagtaagagggattctccctcaaagctcc---------------gacacctggattttacacggctggattttagacttccggcctgcagaactgtgaggggaccaatctgtgttgttttaagcagt-gatttgcagtgatttgttacagcagcaatggaaacaaatGAGCAGTCCTAGGATCTTCATC------CCAG----CT---GCTCCTGGGGTCTCAGGAT--GAGACGCGGGGCCC---GGTCCCCCTCACGCAGGGTC-TCTGCTAGCCTCTG---------A---GGGCCCCTGTCCCAGGTGAGGGG-CTTGGCTCACCTGCCCCCCTAACTTGGCCTCTTTCAATATGATGG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156323769 513 + 157873769 aaattactgtttc----aagctgggaatctgctggtg--------------------------------------agatggggaggtgaccctg-----------------------------------------gcccatctgggggtgg------gggcg---ctgacac-------aaggttctcatagcggggaggctgggggtccaagtcaggaaaaggagctgtgaccccagaaccagaggctgagg--------tg--------tgatgatgg-ggacagggccgggagcccca--------ga-tgcagagagcctctcgcactgggaaaggcagtaagagcgattctccctcaaagctcc---------------gacac---------------ctggattttagacttccggcctgcagaac--tgagggaatcagtctgtgttgttttaagcagt-gatttgcggtgattggttatagcagcaatggaaacaaatGAGCAGTCCTAGGAACTTCATC------CCAG----CT---GCTCCTGGGGTCTCAGGAT--GAGACGCGGGGCCC---GGTCCCCCTCCCGCAGGGTC-TCTGCTGGCCTCTG---------A---GGGCCCCTGTCCCAGGCGAGGGG-CTTGGCTCACCTGCCCCCCTAACTTGGCCTCTTTCAACATGATGC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170350380 535 + 172585720 aaattactgtttc----aagctgggaatctgctggtg--------------------------------------agatggggaggtgaccctg-----------------------------------------gcccatctgggggtga------ggacg---ctgacacagtcacaaggcttctcatagtagagaggttggggatccaagttaggaaaaggagctgtgaccccagaaccagaggctgagg--------tg--------tggtgatgg-ggaaggggccgggagcccag--------ga-tggagggagcctctcacgctgggaaaggcagtaagagggattctccctgaaggctcc---------------gacacctggacttcagatgcctggatttcagacttgcggcctgcagaactatgagggtatcaatctgtgttgttttaagcagt-gatttgcagtgatttgttacagcagcaatggaaacaaaCGAACAGTCCTAGGACCGTGATC------GCAG----AG---GCTCCTGGGGTCTCAGGAT--GAGATGTGGGGCCC---GCTCCCCCTCCTGCAGGGTC-TCTGCTGGCCTCTG---------A---GGATCCCTGTTCCAGACGAGGGG--TTGGCTCACCTGC-CCCCTAACTTGGCATCTTCCAACATGATGG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169095653 535 - 170955103 aaattactgtttc----aagctgggaatctgctggtg--------------------------------------agatggggaggtgaccctg-----------------------------------------gcccatctgggggtga------ggacg---ctgacacagtcacaaggcttctcatagtagagaggttggggatccaagttaggaaaaggagctgtgaccccagaaccagaggctgagg--------tg--------tggtgatgg-ggaaggggccgggagcccag--------ga-tggagggagcctctcacgctgggaaaggcagtaagagggattctccctgaaggctcc---------------gacacctggacttcagatgcctggatttcagacttgcggcctgcagaactatgagggtatcaatctgtgttgttttaagcagt-gatttgcagtgatttgttacagcagcaatggaaacaaaCGAACAGTCCTAGGACCGTGATC------GCAG----AG---GCTCCTGGGGTCTCAGGAT--GAGATGTGGGGCCC---GCTCCCCCTCCTGCAGGGTC-TCTGCTGGCCTCTG---------A---GGATCCCTGTTCCAGACGAGGGG--TTGGCTCACCTGC-CCCCTAACTTGGCATCTTCCAACATGATGG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8382262 535 + 10161646 aaattactgtttc----aagctgggaatctgctggtg--------------------------------------agatggggaggtgaccctg-----------------------------------------gcccatctgggggtga------ggacg---ctgacacagtcacaaggcttctcatagtagagaggttggggatccaagttaggaaaaggagctgtgaccccagaaccagaggctgagg--------tg--------tggtgatgg-ggaaggggccgggaacccag--------ga-tggagggagcctctcacgctgggaaaggcagtaagagggattcttcctgaaggctcc---------------gacacctggacttcagatgcctggatttcagacttgcggcctgcagaactatgagggtatcaatctgtgttgttttaagcagt-gatttgcagtgatttgttacagcagcaatggaaacaaaCGAACAGTCCTAGGACCCTGATC------CCAG----AG---GCTCCTGGGGTCTCAGGAT--GAGATGCGGGGCCC---GCTCCCCCTCCTGCAGGGTC-TCTGCTGGCCTCTG---------A---GGATCCCTGTTCCAGACGAGGGG--TTGGCTCACCTGC-CCCCTAACTTGGCATCTTCCAACATGATGG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1413960 536 + 3144229 aaattactgtttc----aagctgggaatctgctggtg--------------------------------------agatggggaggtgaccctg-----------------------------------------gcccatctgggggtga------ggacg---ctgacacagtcacaaggcttctcatagtggggaggctggggatccaagttaggaaaaggagctgtgaccccagaaccagaggctgagg--------tg--------tggtgatgg-ggaaggggccgggagcccag--------ga-tggagggagcctctcacactgggaaaggcagtaagagggattctccctgaaggctcc---------------aacaccgggacttcagatgcctggatttcagacttgcggcctgcagaactgtgaggggatcaatctgtgttgttttaagcagt-gatttgcagtgatttgttacagcagcaacggaaacaaaCGAGCAGTCCTAGGACCGTGATC------CCAG----CT---GCTCCTGGGGTCTCAGGAT--GAGATGCGGGGCCC---GCTCCCCCTCCTGCAGGGTC-TCTGTTGGCCTCTG---------A---GGATCCCTGTTCCAGACGAGGGG-CTTGACTCACCTGC-CCCCTAACTTGGCATCTTCCAACATGATGG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96700288 536 + 98384682 aaatgactgtttc----aagctgggaatctgctggtg--------------------------------------agatggggaggtgaccctg-----------------------------------------gcccatctgggggtga------ggacg---ctgacacagtcacaaggcttctcatagtagagaggttggggatccaagttaggaaaaggacctgtgaccccagaaccagaggctgagg--------tg--------tggtgatgg-ggaaggggccgggagcccag--------ga-tggagggaggctctcacgctgggaaaggcagtgagagggattctccctgaaggctcc---------------gacacctggacttcagatgcctggatttcagactcgcggcctgcagaactgtgaggggatcagtctgtgttgttttaagcagt-gatttgcagtgatttgttacagcagcaaaggaaacaaaCGAGCAATCCTAGGAATGTGATC------CCAG----CG---GCTCCTGGGGTCTCAGGAT--GAGATGCGGGGCCT---GCTCCCCCTCCTGCAGGGTC-TCTGCTGGCCTCTG---------A---GCATCCCTGTTCCAGACGAGGGG-CTTGACTCACCTGC-CCCCTAACTTGGCATCTTCCAACATGATGG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8236104 536 - 10857215 aaattactgtttc----aagctgggaatctgctggtg--------------------------------------agatggggaggtgaccctg-----------------------------------------gcccatctaggggtga------ggacg---ctgacacagtcacaaggcttctcatagtggggaggctggggatccaagttaggaaaaggagctgtgaccccagaaccagaggctgagg--------tg--------tggtgatgg-ggaaggggccgggagcccag--------ga-tggagggagcctctcacgctgggaaaggcagtaagagggattctccctgaaggctcc---------------gacacctggacttcagatgcctggatttcagacttgcggcctgcagaactgtgaggggatcaatctgtgttgttttaagcagt-gatttgcagtgatttgttacagcagcaacggaaacaaaCGAGCAGTCCTAGGACCGTGATC------CCAG----CT---GCTCTTGGGGTCTCAGGAG--GAGATGTGGGGCCC---GCTCCCCCTCCTGCAGGGTC-TCTGTTGGCCTCTG---------A---GGATCCCTGTTCCAGACAAGGGG-CTTGGCTCACCTGC-CCCCTAACTTGGCATCTTCCAACATGATGG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15627823 534 - 23502949 aaattactgtttc----aagctgggaatctgctggtg--------------------------------------agatggggaggtgaccctg-----------------------------------------gcccatctgggggtga------ggacg---ctg--acagtcacaaggcttctcacagtggggaggctggggatccgagttaggaaaaggagctgtgaccccagaaccagaggctgagg--------tg--------tggtgatgg-ggaaggggccaggagcccag--------ga-tggagggagcctctcacgctgggaaaggcagtaagagggattctccctgaaggctcc---------------gacacctggactttagatgcctggatttcagacttgcggcctgcagaactgtgaggggatcagtctgtgttgttttaagcagt-gatttgcagtgatttgttacagcagcgatggaaacaaaCGAGCAGTCCCAGGAACTTGATC------CCAG----CT---GCTCCTGGGGTCTCAGGAT--GAGATGCGGGGCCC---GCTCCCCCTCCTGCAGGGTC-TCTGCTGGACTCTG---------A---GGATCCCTGTTCCAGACGAGGGG-CTTGGCTCACCTGC-CCCCTAACTTGGCATCATCCAACATGATGG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169907855 555 + 171630274 aaattactg-tcc----aagccaggaatctgctgggg--------------------------------------agatggggagatgatcctg-----------------------------------------gcacacctcagggcggggggctgggca---ctgacgcagtcacaagggttcccatagtggggaagcaggggacccaagttaggaaaaggagctgggaccccagagccagaggttgagg--------tg--------tgaccacag-ggaaggggccaggagcccaggagccaaaga-tgcagggagcctctcacgccggaaaaggcagtcagagggatggtccctgagggctct-----------tctagacgcctggatttcagacacctagattctgtacttccgg-ctgcagaactgtgggggaatcaatccgtgctgtcttcagccac--atttgcagtgacatgttacagcgccattggaaacaaatGAGCAGTCCTAGGAGCTGCATC------CCAGCTGCCT---GCTCCTCAGACCTCAGGGT--GAGATGCGGGGCCC---CATCCGCCTCCAGCAGGGTC-TCTGCCAGCCTCTG---------A---GGG-CCCTGCCCTGGGTGAGGGG-CTCAACACACCTGCCTCTCTAGCTCGGTATCTTCCAACATGATGG i calJac3.chr4 I 321 C 0 s saiBol1.JH378287 1310968 567 - 2905041 aaattactg-tcc----cagccgggaatctgctgggg--------------------------------------agatggggcgatggtcctg-----------------------------------------gcacacctcagggtggggggctgggca---ctgacgcagtcacaagggttcccgtagtggggaggcaggggacccaagttaggagaaggagctgggaccacagatccggaggctgagg--------tg--------tgaccacag-ggaaggggccaggagctcaggagaccggga-tgcagggagcctctcacgcagggaaaggcagtcagagggatggtccctgagggctccgacacctggaatttagacgcctggatttcagacacctagattctgtacttccggcctgtggaactgtgggggaatcaatctgtgctgtcgtcagccac--atttgcagtgatgt-ttacagcgccagtggaaacaaaGGAGCAGTCCCAGGAACTTCATC------CCAGCTGCCT---GCTCCTGGGACCTGAGGGT--GAGAGGCAGGGTCC---CATCCGCCCCCGGCAGGGTC-TCTGCCGGCCTCTG---------A---GGGCCCCTGCCCAGGGTGAGGGG-CTCAGCACACCTGCCCCTCTAGCTCGGCATCTTCTGCCATGATGG i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1273518 563 - 2164891 -----attg-tcc----aagctgggaatcttctgggg--------------------------------------agatggggagatggtcctg-----------------------------------------gcatacctcggggcggtgggctgggca---ctgatgcagtcgcaagggttcccatagtggggcggcaggggacccaagttaggaaaaggagctgggaccccagaaccagaggctgagg--------tg--------tgaccacag-gggaggcgccaggagcccaggagcccagga-tgcagggagcccctcacgcagggaagggcagtcagagggatggtccctgagggctccgacacctggattttagacgcctggatttcagacacctagattctgtactgtcgacctgcagaactgtgggggaatcaatccgtgctgtcttcagccac--atttgcagtgatgtgttacagcaccaatggaaacaaatGAGCAGTCCCAGGAGCTTCATC------CCAGCGGCCT---GCTCCCGGGACCTCAGGGC--GAGATGTGGGGCCC---CATCTGCCTCCGGCAGGGTC-TCTTCCGGCCTCTG---------A---GGGCCCCTGCCCTGGGTGAGGGG-CTCAGCACACCTGCCTCTCTAGCTCGGCATCTTCCGACATGATGG i cebCap1.NW_016107695v1 C 0 I 2 s aotNan1.NW_018494782v1 1521853 552 - 1813869 aaattactg-tcc----aagccgggaatctgctgggg--------------------------------------agatggggagatggtcctg-----------------------------------------gcacacctaggggtggggggctgggca---ctgacacagtcacaagggttcccgtagtggggaggcagtggacccaagttaggaaaaggagctgagaccccagaaccagaggctgagg--------tt--------tgaccacag-ggaaggggccaggaacccaggagcccagga-tgcagggagcctctcacgcagggaaaggcagtcagagggatggtccctgagggctcc---------------gacgcctggattttagacgcctggattctatacttccgacttgcagaactgt-ggggaatcaatccgtgctgtcttcagccac--atttgcagtgatgtgttacagcgccaatggaaacaaatGAGCAGTCCTAGGAACTTCATC------CCAGCTGCCT---GCTCCTGGGACCTCAGGGT--GAGACGCGGGGCCC---CGTCCGCCTCCGGCAGGGTC-TCTGCCGGCCTCTG---------A---GGGCCCCTGCCCTGGGCGAGGGG-CTCGGCACACTTGCCTCTCTAGCTCGGCATCTTCCGACATGATGG i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10963383 561 - 12073884 aaatcaCGTCTCCCGTGAAGTCGTGACCCACATGTTGAAAGTGCATTGCATGTACAGGGAGCACTGCGGCACACAAAACCGGGATTGGACTCTGCACACAAAATCCCCTCTGCACTAAATCCCCAAGCTGGGAGCCTCCTTCTGGGGCAGG------AGATTGTCCTGATGCAATCTCAGTGGTCCTGGGAAGGGGAGACAAAAGGATCTGCATGAGAGAAAGGAGCTGGGACCCCGGAACCCAAGGTGGGAGCTGTAATCTG--------AGACACAGG-TGAGGGTGCTGGGAGC-CAG--------GC-TGAAGGG-GCCTTCAAGGCTGG-AAAGACA---AGAGG----CTCCCCTGAGGCCCT---------------GAAAGACAGGCCTCTG-----CAGATCCCA--------------AGAACCTTGAGAGGACACATCTGTGTCAT--TAAGGAGC-AGTT-------------------------GGAAACTGTGACTCAATCCTGGTAACTGCACG------CCAG----CCATAGCTCCTTGGGTGTCAGAAC--TGGGTCTGGGTCCATGGAATCCTCTTCC--CAGGATC-TCTGCCAGCCTCTG---------AAATGGCTCCCTG-----------------GGACCCACTT-C-TCCATACCT---CATTTTCCCACATGATGG i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56189591 509 + 122678785 gggttaagattcc----acgctgggggcctccccact--------------------------------------agatggggacatggtcctg-----------------------------------------ggttgtccaggggcca------gggtc---atcataa-------agg--tcttgtaaggagaggccaaggggtcagggctagga------------accagacagctggagcttggag--------gggccc---ttaaagacag-ag--ggaggctgtggccgag--------gt-acgcaggtgtctctagaagctggaaaggcaagaaacaggtttc-cctcagaggcacc---------------aaaaggaactctgctgacatcttaactgcagacttttcacctccaaaaccaaaagagagtaaatctgtgttgttttaatccactggtttgccttgatttatgata-------taataacaagaggaaagtaacaGGTCCCTCAGCTACTGACCAG----CT---ACTCGT-GCACCTCAGGCTTCTGGCTAGCGGGCCT----------CTCTTTTGGGGTCTTCTGCTGGTGTTTGTGTTTGTGAG---GGGTTGCTGACCTGGACTGGGGACCCCCCCGCACCCACCTCTCTCGCCTTGTTTC-------------- i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 589501 299 + 760995 -----------------aagttaaagatct-----tt--------------------------------------agatagggagattaccctg-----------------------------------------ggtcatctcagg----------aggtc---cttata--------agacagccagcaa-------------ggtcgaagttaggaaaaggagctgtgattttggaa-cagagtttggag--------tgatgcattctgaagatggaggcagaggccactagccaag--------gagttcaggtgacctctagacttgggaaaggcaaggaaacgagtcctcccctgaagatcc-------------------------ctgccaacacccaagtttttgatttctgacctccagaac---------------------tgCCTTA-------GATCTTTGG-------------------------------------------------GCC------ACAG----GG---GC-CCTTCTTTCTCAGTAT---------------------------------------------------------------------------------------------------------------------------------------- i dasNov3.JH569188 C 0 C 0 a score=16578.000000 s hg38.chr6_KB021644v2_alt 122685 2 + 185823 AC s panTro5.chr6 173578926 2 + 175400573 AC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171812576 2 + 173848474 AC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11495383 2 - 12463322 AC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156324282 2 + 157873769 AC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170350915 2 + 172585720 AT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169096188 2 - 170955103 AT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8382797 2 + 10161646 AT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1414496 2 + 3144229 AC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96700824 2 + 98384682 AC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8236640 2 - 10857215 AC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15628357 2 - 23502949 AT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169908410 2 + 171630274 AC i calJac3.chr4 C 0 I 96 s saiBol1.JH378287 1311535 2 - 2905041 AC i saiBol1.JH378287 C 0 I 94 s aotNan1.NW_018494782v1 1522405 2 - 1813869 AC i aotNan1.NW_018494782v1 C 0 I 99 s otoGar3.GL873575 10963944 2 - 12073884 AC i otoGar3.GL873575 C 0 C 0 e cebCap1.NW_016107695v1 1274081 2 - 2164891 I e dasNov3.JH569188 589800 0 + 760995 C e canFam3.chr1 56190100 0 + 122678785 C a score=2148398.000000 s hg38.chr6_KB021644v2_alt 122687 381 + 185823 ATCGTTCTGCTCTCCAGCTGCTCAGAGGGCAAGGCCTGCACAGAGGCTGTGGTCCATGGATTGGAGTTTGTGGCCCAGCTGTGGGGAGTATGGAGAGAAAGAGCAGGAGATACGCTGGGGTGCTGGGGACAGGGAGATCCCAGGCCAGGCAGGTGCCAACCTGC-AGGCTGTTGGGCA-------CAGAGTGGGTTGTTCTCTAGGAGTGAGATGCCAAGGTTTCGAATGTGCCCAGCATTAAGGATTCAGAGATACCTAA-ATCA-GGAAGATGGCCAGCCTAGGACAGATTA------GGAATACCAGCAGATC--CTT--TTTTTAAAAAA-GGTAGACTAAACTC---------GTGTTTCA----GCTGTGCAAGATTAATACTGATTATAATCACCCATGCGACTTGCT s panTro5.chr6 173578928 382 + 175400573 ATCGTTCTGCTCTCCAGCTGCTCAGAGGGCAAGGCCGGCACAGAGGCTGTGGTCCATGGATTGGAGTTTGTGGCCCAGCTGTGGGGAGTATGGAGAGAAAGAGCAGGAGATACGCTGGGGTGCTGGGGACAGGGAGATGCCAGGCCAGGCAGGTGCCCACCTGC-AGGCTGTTGGGCA-------CAGAGTGGGTTGTTCTCCAGGAGTGAGATGCCAAGGTTTCGAATGTGCCCAGCATTAAGGATTCAGAGATACCTAA-ATCA-GGAAGATGGCCAGCCTAGGACAGATTA------GGAATACCAGCAGATC--CTT--TTTTTAAAAAAAGGTAGACTAAACTC---------GTGTTTCA----GCTGTGCAAGATTAATACTGATTATAATCACCCATGCGACTTGCT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171812578 381 + 173848474 ATCGTTCTGCTCTCCAGCTGCTCAGAGGGCAAGGCCGGCACAGAGGCTGTGGTCCATGGATTGGAGTTTGTGGCCCAGCTGTGGGGAGTATGGAGAGAAAGAGCAGGAGATACGCTGGGGTGCTGGGGACAGGGAGATCCCAGGCCAGGCAGGTGCCCACCTGC-AGGCTGTTGGGCA-------CAGAGTGGGTTGTTCTCCAGGAGTGAGATGCCAAGGTTTCGAATGTGCCCAGCATTAAGGATTCAGAGATACCTAA-ATCA-GGAAGATGGCCAGCCTAGGACAGATTA------GGAATACCAGCAGATC--CTT--TTTTAAAAAAA-GGTAGACTAAACTC---------GTGTTTCA----GCTGTGCAAGATTAATACTGATTATAATCACCCATGCGACTTGCT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11495385 382 - 12463322 ATGGATCTGCTCTCTAGCTGCTCAGAGGGCAAGGCCGGCACAGAGGCTGTGGTCCATGGATTGGAGTTTGTGGCCCAGCTGTGGGGAGTATGGAGAGAAAGAGCAGGAGATACTCTGGGGTGCTGGGGACAGGGAGATCCCAGGCCAGGCAGGTGCCCACCTGC-AGGCTGTTGGGCA-------CAGAGTGGGTTGTTCTCTAGGAGTGAGATGCCAAGGTTTCGAATGTGCCCAGCATTAAGGATTCAGAGATACCTAA-ATCA-GGAAGATGGCCAGCCTAGGACAGATTA------GGAATACCAGCAGATC--CTT--TTTTTAAAAAAAGGTAGACTAAACTC---------GTGTTTCA----GCTGTGCAAGATTAATACTGATTATAATCACCCATGCGACTTGCT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156324284 383 + 157873769 ATGGTGCTGCTCTCCAGCTGCTCAGAGGGCAAGGCCGGCACAGAGGCCGTGGTCCATGGATTGGAGTTTGTGGCTCAGCTGCGGGGAGTATGGAGAGAAAGAGCAGGGGATACGCTGGGGTGCTGGGGACAGGGAGATTCCAGGCCGGGCAGGTGCCCACCTGC-AGGCTGTTGGGCA-------CAGAGTGGGTTGTTCTCTAGGAGTGGGATGCCAAGATTTCGAATGTGCCCAGCATTAAGGATTCAAAGATACCTAA-ATCA-GGAAGATGGCCAGCCTAGGATGGATTA------GGAATACCAGTGGGTC--ATTTCTTTTTAAAAAA-GGTAGACCGAACTC---------GTGTTTCA----GCTGTGAAAGATTAATACTGATTATAATCACCCATGCGACTTGCT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170350917 384 + 172585720 GTGGTGCTGCTCTCCAGCTGCTCAGAGGGCGAGGCCAGGACAGGGGCTGTGCTCCATGGATGGGAGTTTGTGGCCCAGTTGTGGGGAGTATGGAGAGAAAGAGCAGGGGATGCGCTGAGGTGCTGGGGACAGGGAGACCCCAGGCCGGACAGGTGCCCACCTGC-AGGCTGTTGGGCA-------CAGAGTGGGCTGTTCTCTAGGAGTGAGATGCCAAGGTTTCGAATGTGCCCAGCATTAAGGATTCAAAGATACCTAATATCA-GGAAGATGGCCAGCCTAGGACGGATTA------GGAATACCAGTAGATCTTTTT--TTTTTTTAAA--GGTAGACTAAAAAA--------GGTGTTTCA----GCTGTGAAAGATTAATACTGATTATAATCACCCAAGTGACTTGCT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169096190 384 - 170955103 GTGGTGCTGCTCTCCAGCTGCTCAGAGGGCGAGGCCAGGACAGGGGCTGTGCTCCATGGATGGGAGTTTGTGGCCCAGTTGTGGGGAGTATGGAGAGAAAGAGCAGGGGATGCGCTGAGGTGCTGGGGACAGGGAGACCCCAGGCCGGACAGGTGCCCACCTGC-AGGCTGTTGGGCA-------CAGAGTGGGCTGTTCTCTAGGAGTGAGATGCCAAGGTTTCGAATGTGCCCAGCATTAAGGATTCAAAGATACCTAATATCA-GGAAGATGGCCAGCCTAGGACGGATTA------GGAATACCAGTAGATCTTTTT--TTTTTTTAAA--GGTAGACTAAAAAA--------GGTGTTTCA----GCTGTGAAAGATTAATACTGATTATAATCACCCAAGTGACTTGCT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8382799 384 + 10161646 GTGGTGCTGCTCTCCAGCTGCTCAGAGGGCGAGGCCAGGACAGGGGCTGTGCTCCATGGATGGGAGTTTGTGGCCCAGTTGTGGGGAGTATGGAGAGAAAGAGCAGGGGATGCGCTGAGGTGCTGGGGACAGGGAGACCCCAGGCCAGACAGGTGCCCACCTGC-AGGCTGTTGGGCA-------CAGAGTGGGCTGTTCTCTAGGAGTGAGATGCCAAGGTTTCGAATGTGCCCAGCATTAAGGATTCAAAGATACCTAATATCA-GGAAGATGGCCAGCCTAGGACGGATTA------GGAATACCAGTAGATCTTTTT--TTTTTTTAAA--GGTAGACTAAAAAA--------GGTGTTTCA----GCTGTGAAAGATTAATACTGATTATAATCACCCAAGTGACTTGCT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1414498 382 + 3144229 GTGGTGCTGCTCTCCAGCTGCTCAGAGGGCGAGGCCGGGACAGGGGCTGTGCTCCATGGATGGGAGTTTGTGGCCCAGTTGTGGGGAGTATGGAGAGAAAGAGCAGGGGATGCGCTGGGGTGCTGGGGACAGGGAGACCCCAGGCCGGGCATGTGCCCACCTGC-AGGCTGTTGGGCA-------CAGAGTGGGTTGTTCTCTAGGAGTGAGATGCCAAGGTTTCGAATGTGCCCAGCATTAAGGATTCAAAGATACCTAATATCA-GGAAGACGGCCAGCCTAGGACGGATTA------GGAATACCAGTAGATC--TTT--TTTTTTTAAA--GGTAGACTAAAAAA--------GGTGTTTCA----GCTGTGAAAGATAAATACTGATTATAATCACCCAAGTGACTTGCT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96700826 382 + 98384682 GTGGTGCTGCTCTCCCGCTGCTCAGAGGGCGAGGCCGGGACAGGGGCTGTGCTCCATGCATGGGAGTTTGTGGCCCAGTTGCGGGGAGTATGGAGAGAAAGAGCAGGGGATGCGCTGGGGTGCTGGGGACAGGGAGACCCCAGGCCGGGCAGGTGCCCACCTGC-AGGCTGTTGGGCA-------CAGAGTAGGTTGTTCTCTAGGAGTGAGATGCCAAGGTTTCGAATGTGCCCGGCATTAAGGATTCAAAGATACCTAATATCA-GGAAGACAGCCAGCCTAGGACGGATTA------GGAATACCAGTAGATC--ATT--TTTGTTTAAA--GGTAGACTAAAAAA--------GGTGTTTCA----GCTGTCAAAGATTAATACTGATTATAATCACCCAAGTGACTTGCT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8236642 384 - 10857215 GTGGTGCTGCTCTCCAGCTGCTCAGAGGGCGAGGCCGGGACAGGGGCTGTGCTCCATAGATGGGAGTTTGTGGCCCAGTTGCGGGGAGTATGGAGAGAAAGAGCAGGGGATGCGCTGGGGTGCTGGGGACAGGGAGACCCCAGGCCGGGCAGATGCCCACCTGC-AGGCTGTTGGGCA-------CAGAGTGGGCTGTTCTCTAGGAGTGAGATGCCAAGGTTTCGAATGTGCCCAGCATTAAGGATTCAAAGATACCTAATATCA-GGAAGACGGCCAGCCTAGGACGGATTA------GGAATACCAGTAGATCTTCTT--TTTTTTTAAA--GGTAGACTAAAAAA--------GGTGTTTCA----GCTGTGAAAGATAAATACTGATTATAATCACCCAAGTGACTTGCT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15628359 382 - 23502949 GTGGTGCTGCTCTCCAGCTGCTCTGAGGGCGAGGCTGGGACAGGGGCTGTGCCCCATGGATCAGAGTTTGTGGCCCAGTTGTGGGGAGTATGGAGAGAAAGAGCAGGGGATGCGCTGGGGTGCTGGGGACAGGGAGACCCCAGGCCAGGCAGGAGCCCACCTGC-AGGCTGTTGGGCA-------CAGAGTGGGTTGTTCTCTAGGAGTGAGATGCCAAAGTTTCGAATGTGCCCAGCATTAAGGATTCAAAGATACCTAACATCA-GGAAGACGGCCAGCCTAGGAGGGATTA------GGAATACCAGTAGATC--ATT--TTTTTTTAAA--GGTAGACTAAAAAA--------GGTGTTTCA----GCTGTGAAAGATTAATACTGACTATAATCACCCAAGTGACTTGCT i colAng1.NW_012114488v1 C 0 C 0 s otoGar3.GL873575 10963946 311 - 12073884 GTGG-------CTCCACCT-CTCAGA-------GCATGCACAGAGA--GCGCT-----------AATCTGGGGTCTAGTCCTG----CTCTA-------------------ACTCTGGGGTACTG----------GACCCAGGGCTAGGCAGAAGCCCACCTGC-TGGGTGAGAGGTGAGAGGTCCTGAGTGCTTTGCTCTCAAAGAGTGAGAAGCCCAGGTTTAAAGTGTGTCTTGGGTCAAGGATTCATAAGTACAGGACATCA-GGAGAACACCAGACCTGGAACTGATCA------------------------TTT--AAAAATCAAA--ATGCAACTCAACTC---------ATGTTTTA----ACTGTGAAAAGGCAACACTGATCGTAATCATCCACGTGACCTTCT i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56190100 259 + 122678785 --------------------------------------CACAAAGG-----------------------------------------AAACAGGAAGAGACAGGAAGAGA-----TGGTAGACGGGGGCCTGTGGGGACCCA--CC-------TGCCCAGCAGG-AAG-TGTGAAGCA-------TG--------TGCTCCCTTGGGGTGCAATGCA----------------TCTGGATCAAGGA-TCAGAAGCTCACAGTATCA-GGA--------AGCCTTGAATGCATTT------TAAGTACTATCGGGTC--TTT------TAAAAA--GAAAAAACAAACCATCTCCACGTGGGTTCTA----GCTGCGGAAATGTAATACTGATTAAAACTAACCACGTGACTTCCT i canFam3.chr1 C 0 I 28 s dasNov3.JH569188 589800 297 + 760995 -----TCTGCCATCC--TTTTTGAGAAGTCACTACC------------------------------------------------------TGGGATCAGAAAACATTAGACAGGATGAGG-----------GGAGGA------------------CCTACCTGCTGGGCAGTCAGATG-------CACAATATTTCATACTCAGGTGGAGAGATGAGAGGTTTCAAAAGGTATTTAGTATCAAGGATGAAATGTTACATAATACCAGGGAAAACTGTCAACCATGAGTAGATATAAATACAAAATACTGGAGGGAT--ATT------GAAAAA--AACAAAC--AAACA---------TTTTTTTAGGGGGCTGTGAAACATTAATACTGATTATAAGCATTTATGTGACATGCT i dasNov3.JH569188 C 0 C 0 e saiBol1.JH378287 1311537 94 - 2905041 I e aotNan1.NW_018494782v1 1522407 99 - 1813869 I e cebCap1.NW_016107695v1 1274081 2 - 2164891 I e calJac3.chr4 169908412 96 + 171630274 I a score=245321.000000 s hg38.chr6_KB021644v2_alt 123068 36 + 185823 AATTATTTTTATCAAAACTGACCACAAAGGGTATTT s panTro5.chr6 173579310 36 + 175400573 AATTATTTTTATCAAAACTGACCACAAAGGGTATTT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171812959 36 + 173848474 AATTATTTTTATCAAAACTGACCACAAAGGGTATTT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11495767 36 - 12463322 AATTATTTTTATCAAAACTGACCACAAAGGGTATTT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156324667 36 + 157873769 AATTATTTTTATCAAAACTGACCACAAAGGGTATTT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170351301 36 + 172585720 AATTATTTTCATCAAAACTGACCACAAAGGATATGT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169096574 36 - 170955103 AATTATTTTCATCAAAACTGACCACAAAGGATATGT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8383183 36 + 10161646 AATTATTTTCATCAAAACTGACCACAAAGGATATGT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1414880 36 + 3144229 AATTATTTTCATCAAAACTGACCACAAAGGGTATGT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96701208 36 + 98384682 AATAATTTTCATCAAAACTGACCACAAAGGGTATGT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8237026 36 - 10857215 AATTATTTTCATCAAAACTGACCACAAAGGGTATGT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15628741 36 - 23502949 AATTATTTTCATCAAAACTGACCACGAAGGGTATGT i colAng1.NW_012114488v1 C 0 C 0 s otoGar3.GL873575 10964257 36 - 12073884 AATTATTTTTACCTAAGTTAACCACATGGGGCATTT i otoGar3.GL873575 C 0 I 13 s dasNov3.JH569188 590097 36 + 760995 AATCATTTTTATTTTACCTGGCCACGCAGAGAATTT i dasNov3.JH569188 C 0 C 0 e saiBol1.JH378287 1311537 94 - 2905041 I e aotNan1.NW_018494782v1 1522407 99 - 1813869 I e cebCap1.NW_016107695v1 1274081 2 - 2164891 I e calJac3.chr4 169908412 96 + 171630274 I e canFam3.chr1 56190359 28 + 122678785 I a score=28926.000000 s hg38.chr6_KB021644v2_alt 123104 4 + 185823 CCAG s panTro5.chr6 173579346 4 + 175400573 CCAG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171812995 4 + 173848474 CCAG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11495803 4 - 12463322 CCAG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156324703 4 + 157873769 CCAG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170351337 4 + 172585720 CCAG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169096610 4 - 170955103 CCAG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8383219 4 + 10161646 CCAG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1414916 4 + 3144229 CCAG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96701244 4 + 98384682 CCAG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8237062 4 - 10857215 CCAG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15628777 4 - 23502949 CCAG i colAng1.NW_012114488v1 C 0 C 0 s dasNov3.JH569188 590133 4 + 760995 TCAG i dasNov3.JH569188 C 0 I 924 e otoGar3.GL873575 10964293 13 - 12073884 I e saiBol1.JH378287 1311537 94 - 2905041 I e aotNan1.NW_018494782v1 1522407 99 - 1813869 I e cebCap1.NW_016107695v1 1274081 2 - 2164891 I e calJac3.chr4 169908412 96 + 171630274 I e canFam3.chr1 56190359 28 + 122678785 I a score=41151.000000 s hg38.chr6_KB021644v2_alt 123108 7 + 185823 ATGCCAG s panTro5.chr6 173579350 7 + 175400573 ATGCCAG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171812999 7 + 173848474 ATGCCAG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11495807 7 - 12463322 ATGCCAG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156324707 7 + 157873769 ATGCCAG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170351341 7 + 172585720 ATGCCAG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169096614 7 - 170955103 ATGCCAG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8383223 7 + 10161646 ATGCCAG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1414920 7 + 3144229 ATGCCGG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96701248 7 + 98384682 ATGCCGG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8237066 7 - 10857215 ATGCCGG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15628781 7 - 23502949 ATGCCAG i colAng1.NW_012114488v1 C 0 C 0 e otoGar3.GL873575 10964293 13 - 12073884 I e saiBol1.JH378287 1311537 94 - 2905041 I e aotNan1.NW_018494782v1 1522407 99 - 1813869 I e cebCap1.NW_016107695v1 1274081 2 - 2164891 I e calJac3.chr4 169908412 96 + 171630274 I e dasNov3.JH569188 590137 924 + 760995 I e canFam3.chr1 56190359 28 + 122678785 I a score=7800.000000 s hg38.chr6_KB021644v2_alt 123115 1 + 185823 G s panTro5.chr6 173579357 1 + 175400573 G i panTro5.chr6 C 0 C 0 s panPan2.chr6 171813006 1 + 173848474 G i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11495814 1 - 12463322 G i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156324714 1 + 157873769 G i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170351348 1 + 172585720 G i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169096621 1 - 170955103 G i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8383230 1 + 10161646 G i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1414927 1 + 3144229 G i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96701255 1 + 98384682 G i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8237073 1 - 10857215 G i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15628788 1 - 23502949 G i colAng1.NW_012114488v1 C 0 C 0 s saiBol1.JH378287 1311631 1 - 2905041 G i saiBol1.JH378287 I 94 C 0 e otoGar3.GL873575 10964293 13 - 12073884 I e aotNan1.NW_018494782v1 1522407 99 - 1813869 I e cebCap1.NW_016107695v1 1274081 2 - 2164891 I e calJac3.chr4 169908412 96 + 171630274 I e dasNov3.JH569188 590137 924 + 760995 I e canFam3.chr1 56190359 28 + 122678785 I a score=14462.000000 s hg38.chr6_KB021644v2_alt 123116 2 + 185823 GT s panTro5.chr6 173579358 2 + 175400573 GT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171813007 2 + 173848474 GT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11495815 2 - 12463322 GT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156324715 2 + 157873769 GT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170351349 2 + 172585720 GT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169096622 2 - 170955103 GT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8383231 2 + 10161646 GT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1414928 2 + 3144229 GT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96701256 2 + 98384682 GT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8237074 2 - 10857215 GT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15628789 2 - 23502949 GT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169908508 2 + 171630274 GC i calJac3.chr4 I 96 C 0 s saiBol1.JH378287 1311632 2 - 2905041 GC i saiBol1.JH378287 C 0 C 0 e otoGar3.GL873575 10964293 13 - 12073884 I e aotNan1.NW_018494782v1 1522407 99 - 1813869 I e cebCap1.NW_016107695v1 1274081 2 - 2164891 I e dasNov3.JH569188 590137 924 + 760995 I e canFam3.chr1 56190359 28 + 122678785 I a score=9555.000000 s hg38.chr6_KB021644v2_alt 123118 1 + 185823 A s panTro5.chr6 173579360 1 + 175400573 A i panTro5.chr6 C 0 C 0 s panPan2.chr6 171813009 1 + 173848474 A i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11495817 1 - 12463322 A i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156324717 1 + 157873769 A i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170351351 1 + 172585720 A i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169096624 1 - 170955103 A i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8383233 1 + 10161646 A i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1414930 1 + 3144229 A i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96701258 1 + 98384682 A i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8237076 1 - 10857215 A i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15628791 1 - 23502949 A i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169908510 1 + 171630274 A i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1311634 1 - 2905041 A i saiBol1.JH378287 C 0 C 0 s dasNov3.JH569188 591061 1 + 760995 A i dasNov3.JH569188 I 924 C 0 e otoGar3.GL873575 10964293 13 - 12073884 I e aotNan1.NW_018494782v1 1522407 99 - 1813869 I e cebCap1.NW_016107695v1 1274081 2 - 2164891 I e canFam3.chr1 56190359 28 + 122678785 I a score=1668588.000000 s hg38.chr6_KB021644v2_alt 123119 202 + 185823 AAAACAGAGCCA-GGCACTTTTATTCACTGATTATTCA---TCCTTTTATTCTTGGCTTGTCCAGGAGTCCGGAGCTATTTTAAACAGCATCATTAGAACTGTCTCTGCAAACCCCGTCCGCTGGTGTGCTGACTGTGGATAGGTCTCCGCCAAGCCGTGGCTCCTGTC-GTCCTGACATAGACGCCGCCATTTTAACGCTGACCTC s panTro5.chr6 173579361 202 + 175400573 AAAACAGAGCCA-GGCACTTTTATTCACTGATTATTCA---TCCTTTTATTCTTGGCTTGTCCAGGAGTCCAGAGCTATTTTAAACAGCATTATTAGAACTGTCTCTGCAAACACCGTCCGCTGGTGTGCTGACTGTGGACAGGTCTCCGCCAAGCCGTGGCTCCTGTC-GTTCTGACATAGACGCCGCCATTTTAACGCTGACCTC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171813010 202 + 173848474 AAAACAGAGCCA-GGCACTTTTATTCACTGATTATTCA---TCCTTTTATTCTTGGCTTGTCCAGGAGTCCAGAGCTATTTTAAACAGCATTATTAGAACTGTCTCTGCAAACACCGTCCGCTGGTGTGCTGACTGTGGACAGGTCTCCGCCAAGCCGTGGCTCCTGTC-GTTCTGACATAGACGCCGCCATTTTAACGCTGACCTC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11495818 202 - 12463322 AAAACAGAGCTA-GGCACTTTTATTCACTGATTATTCA---TCCTTTTATTCTTGGCTTGTCCAGGAGTCCAGAGCTATTTTAAACAGCATTATTAGAACTGTCTCTGCAAACACCGTCCGCTGGTGTGCTGACTGTAGACAGGTCTCCGCCAAGCCGTGGCTCCTGTC-GTCCTGACATAGACGCTGCCATTTTAATGCTGACCTC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156324718 202 + 157873769 AAAACAGAGCCA-GGCACTTTTATTCACTGATTGTGCA---TCCTTTTATTCTTGGCTTGTCCAGGAGTCCAGAGCTATTTTAAACAGCATCATTAGAAGTGTCTCTGCAAACACCGTCCACTGGTGTGCTGACCGTGGACAGGTCTCCGCCAAGCTGTGGCTCCTGTC-ATCCTGACATAGACGCTGCCATGTTAACGCTGACCTC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170351352 202 + 172585720 AAAACAGAGCCA-GGCAGTTTTATTCACAGATTGTCCA---TCCTTTTATTCTTGGCTTATCCAGGAGTCCAGAGCTATTTTAAACAGCATCGTTAGAACCATCTCTGCAAACACTGTCCTCTGGTGTGCTGGCCGTGGACAGGTCTCCGCCAAGTCGTGGCTCCTGTC-ATCCTGACTTAGATGCTGCTGTTTTAACACTGACCTC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169096625 202 - 170955103 AAAACAGAGCCA-GGCAGTTTTATTCACGGATTGTTCA---TCCTTTTATTCTTGGCTTATCCAGGAGTCCAGAGCTATTTTAAACAGCATCGTTAGAACCGTCTCTGCAAACACTGTCCTCTGGTGTGCTGGCCGTGGACAGGTCTCCGCCAAGTCGTGGCTCCTGTC-ATCCTGACTTAGATGCTGCTGTTTTAACACTGACCTC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8383234 202 + 10161646 AAAACAGAGCCA-GGCAGTTTTATTCACGGATTGTTCA---TCCTTTTATTCTTGGCTTATCCAGGAGTCCAGAGCTATTTTAAACAGCATCGTTAGAACCGTCTCTGCAAACACTGTCCTCTGGTGTGCTGGCTGTGGACAGGTCTCCGCCAAGTCGTGGCTCCTGTC-ATCCTGACTTAGATGCTGCTGTTTTAACACTGACCTC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1414931 202 + 3144229 AAAACAGAGCCA-GGCAGTTTTATTCACTGATTGTTCA---TCCTTTTATTCTTGGCTTATCCAGGAGTCCAGAGCTATTTTAAACAGCATCGTTAGAACCGTCTCTGCAAACACTGTCCTCTGGTGTGCTGGCCATGGACAGGTCTCCGCCAAGCCGTGGCTCCTGTC-ATCCTGACTTAGATGCTGCTGTTTTAACACTGACCTC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96701259 203 + 98384682 AAAACAGAGCCAGGGCAGTTTTATTCACTGATTGTTCA---TCCTTTTATTCTTGGCTTATCCACTAGTCCAGAGCTATTTTAAACAGCATCGTTAGAACTGTCTCTGCAAACACTGTCCTCTGGTGTGCTGGCCATGGACAGGTCTCCGCCAAGCCGTGGGTCCTGTC-GTCTTGACTTAGATGCTGCCCTTTTAACGCTGACCTC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8237077 202 - 10857215 AAAACAGAGCCA-GGCAGTTTTATTCACGGATTGTTCA---TCCTTTTATTCTTGGCTTATCCAGGAGTCCAGAGCTATTTTAGACAGCATCGTTAGAACCGTCTCTGCAAACACTGTCCTCTGGTGTGCTGGCCATGGACAGGTCTCCGCCAAGCCGTGGCTCCTGTC-ATCCTGACTTAGATGCTGCTGTTTTAACACTGACCTC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15628792 202 - 23502949 AAAACAGAGCCA-GGCAGTTTTATTCACTGATTGTTCA---TGCTTTTATTCTTGGCTTATCCAGGAGTCCAGAGCTATTTTAAACAGCATCCTTAGAACTGTCTCTGCAAACACTGTCCGCTAGTGTGCTGGCCATGGACAGATCTCCACCAAGCCATGGCTCCTGTC-GTCCTGACTTAGACGCTGCCATTTTAACACTGACCTC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169908511 202 + 171630274 AAACCCTAGCCA-GGCACTTTTATTCACTGATTGATTGTTCTCCTTGTATTCTGGCT-TGTCCAGGAGTCTAGAGCTCCTTTCAACTGCATCGTTAGAATCATCTCTGCAGGCACT-TCGGCTGGTGTGCTGACCGTGG-CAGGTCTCTGCCAGGCCTCGGCTCCTGTC-AGCCTGACGTGGATGCTGCCATGTTCACGCTGACCTC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1311635 199 - 2905041 AAAACCGAGCCG-GGCAGTTTGATTCACTAATTGCTAA---TCCTTGTATTCTCAGC-TGTCCAGGAGTCCAGAGCTACTTTAAACTGCATCGTTAGAACCGTCTCTACAGGCACC-TCGGCTGGTGTGCTGACCGTGG-CAGGTCTCTGCCAGGCCTCGGCTCCTGTC-ATCCTGACTTGGATGCTGCCGTGTTCACGCTGACCTC i saiBol1.JH378287 C 0 C 0 s aotNan1.NW_018494782v1 1522506 200 - 1813869 AAAACCGAGCCA-GGCAGTTTTATTCACTAATTGTTCA---TCCTTGTATTCTCGGCTTGTCCAGGAGTCCAGAGCTACTTTAAACTGCATCGTTAGAACCGTCTCTACAGGCACC-TCGGCTGGCATGCTGACCGTGG-CAGGTGTCTGCCAGGCCTCGGCTCCTGTC-ATCCTGATGTGGACGCTGCCGTGTTCACGCTGACCTC i aotNan1.NW_018494782v1 I 99 C 0 s dasNov3.JH569188 591062 196 + 760995 AAAAATGAACCA-AGCAGTTTTATTTACAATCCAATTA---TCATTGC-TTCTTTGCTTTTC--AGAGTGCAGAGACATTTTAAATCAAATCTTTAGAACCACATCTAAAAGTGTAATTCTCTGATATTTTGTCTGGGGGAAGATATACATCAAGCAGTTATTCTAAACAATCATGGCATGGGTTTTGCTGCTTTA----TGACttc i dasNov3.JH569188 C 0 I 536 e otoGar3.GL873575 10964293 13 - 12073884 I e cebCap1.NW_016107695v1 1274081 2 - 2164891 I e canFam3.chr1 56190359 28 + 122678785 I a score=450912.000000 s hg38.chr6_KB021644v2_alt 123321 56 + 185823 CAGGGGCTGGTGGCTGGACCTGCGCGGCCATCACTGCCCAGACCCAGCAGAACCC------C s panTro5.chr6 173579563 60 + 175400573 CAGGGGCTGGTGGCTGGACCTGCGCGGCCATCACTGCCCTGAACCAGCAGCCCCG--TGGGC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171813212 62 + 173848474 CAGGGGCTGGTGGCTGGACCTGCGCGGCCATCACTGCCCTGAACCAGCAGAACCCCGTGGGC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11496020 62 - 12463322 CAGGGGCTGGTGGCTGGACCTGTGCGGCCATCACTGCCCAGACCCAGCAGAACCCCGTGAGC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156324920 62 + 157873769 CAGGGGCTGGTGGCTGGACCTGCTTGGCCATCACTGCCCAGACCCAGCAGAACCCCATGGGC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170351554 62 + 172585720 AAGGGACTGGTGGCTGGACCTGCGCGGCCGTCACTGCCCCAACCCAGCAGAACCCCGTGGGC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169096827 62 - 170955103 AAGGGACTGGTGGCTGGACCTGCGCGGCCGTCACTGCCCCAACCCAGCAGAACCCCGTGGGC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8383436 62 + 10161646 AAGGGACTGGTGGCTGGACCTGCGCGGCCATCACTGCCCCAACCCAGCAGAACCCCGTGGGC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1415133 62 + 3144229 AAGGGACTGGTGGCTCGACCTGCGCGGCCGTCACTGCCCCAACCCAGCAGAACCCCGTGGGC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96701462 62 + 98384682 AAGGGACTGGTGGCTGGACCTGCACCGCTGTCACTGCCCCAACCCAGCAGAACCCCGTGGGC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8237279 62 - 10857215 AAGGGACTGGTGGCTGGACCTGCGCGGCCGTCACTGCCCCAACCCAGCAGAACCCCGTGGGC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15628994 62 - 23502949 AAGGGACTGGTGGCTGGACCTGCGCGGCCGTCACTGCCCCAACCCAGCAGAACCCCGTGGGC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169908713 56 + 171630274 AGGGGGCTGGCGGCTGGACCTGCATGGCCGTCCCTGTCCCGATACAGCAGAGCCCC------ i calJac3.chr4 C 0 I 6 s saiBol1.JH378287 1311834 56 - 2905041 AGGGGGCTGGCAGCTGGACCCGCGTGGCCGTCACTGTCCCGATACAGCAGAGCCCC------ i saiBol1.JH378287 C 0 I 6 s aotNan1.NW_018494782v1 1522706 56 - 1813869 AGGGGGCTGGCAGCTGGACCTGCGTGGCCGTCACTGTCCCGATACAGCAGAGCCCC------ i aotNan1.NW_018494782v1 C 0 T 355 e otoGar3.GL873575 10964293 13 - 12073884 I e cebCap1.NW_016107695v1 1274081 2 - 2164891 I e dasNov3.JH569188 591258 536 + 760995 I e canFam3.chr1 56190359 28 + 122678785 I a score=69104.000000 s hg38.chr6_KB021644v2_alt 123377 12 + 185823 ATGGTTGCACAC-- s panTro5.chr6 173579623 12 + 175400573 GTGGTTGCACAC-- i panTro5.chr6 C 0 C 0 s panPan2.chr6 171813274 12 + 173848474 ATGGTTGCACAC-- i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11496082 12 - 12463322 GTGGTTGCACAC-- i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156324982 12 + 157873769 ATGGTTGCACAC-- i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170351616 12 + 172585720 GTGGCTGCACGC-- i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169096889 12 - 170955103 GTGGCTGCACGC-- i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8383498 12 + 10161646 GTGGCTGCACGC-- i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1415195 12 + 3144229 ATGGCTGCATGC-- i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96701524 12 + 98384682 ACGTCTGCACGC-- i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8237341 12 - 10857215 ATGGCTGCACGC-- i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15629056 12 - 23502949 ATGGCTGCACAC-- i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169908775 14 + 171630274 GTGGCTGCACACGT i calJac3.chr4 I 6 C 0 s saiBol1.JH378287 1311896 14 - 2905041 GTGGCCGCACACGT i saiBol1.JH378287 I 6 C 0 e otoGar3.GL873575 10964293 13 - 12073884 I e aotNan1.NW_018494782v1 1522762 355 - 1813869 T e cebCap1.NW_016107695v1 1274081 2 - 2164891 I e dasNov3.JH569188 591258 536 + 760995 I e canFam3.chr1 56190359 28 + 122678785 I a score=495438.000000 s hg38.chr6_KB021644v2_alt 123389 67 + 185823 ATCTCCCACTAACATTCGGCATCAAAAGTCAGGGAATCGACGTTTATTGCGAAGTTCAAGACGGCTC s panTro5.chr6 173579635 67 + 175400573 GTCTCCCACTAACATTCGGCATCAAAAGTCAGGGAATCGACGTTTATTGCGAAGTTCAAGACAGCTC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171813286 67 + 173848474 GTCTCCCACTAACATTCGGCATCAAAAGTCAGGGAATCGACGTTTATTGCGAAGTTCAAGACAGCTC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11496094 67 - 12463322 GTCTCCCACTAACATTCGGCATCAAAAGTCAGGGAATCGACGTTTATTGCGAAGTTCAAGACAGCTC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156324994 67 + 157873769 ATCTCCCACTAACATTCAGCATCAAAAGTCAGGAAATCGACGTTTATTGCGAAGTTCAAGACAGCTC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170351628 67 + 172585720 GTCTCCCACTAACGTTCAGCATCGAAAGTCGGGGAATCCACATTTATTGCAAAGTTCAAGACAGCTC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169096901 67 - 170955103 GTCTCCCCCTAACGTTCAGCATCGAAAGTCGGGGAATCCACATTTATTGCAAAGTTCAAGACAGCTC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8383510 67 + 10161646 GTCTCCCAGTAACGTTCAGCATTGAAAGTCGGGGAATCCACATTTATTGCAAAGTTCAAGACAGCTC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1415207 67 + 3144229 GTCTCCCACTAACGTTCAGCATCAAAAGTCGGGGAATCCACATTTATTGCAAAGTTCAAGACAGCTC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96701536 67 + 98384682 GTCTCCCACTAACGTTCCGCATCGAAAGTCAGGGAATCCACATTTATTGCAAAGTTCAAGACAGCTC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8237353 67 - 10857215 GTCTCCCACTAACGTTCAGCATCGAAAGTTGGGGAATTCACATTTATTGCAAAGTTCAAGACAGCTC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15629068 67 - 23502949 GTCTCCCACTAACGTTCAGCATCGAAAGTCGGGGAATCCACATTTATTGCAAAGTTCAAGACAACTC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169908789 65 + 171630274 GTCTGCCACTAACCTTCAACATCTAAAGTCGGAGAGTTGACATTTAT--CAGAGTGGAAGACAGCTC i calJac3.chr4 C 0 T 442 s saiBol1.JH378287 1311910 67 - 2905041 GTCTGCCACTAACCTTCAGCATCTGAAGTCAGAGAATTGACGTTTATTGCAGAGTGGAAGACAGCTC i saiBol1.JH378287 C 0 C 0 s dasNov3.JH569188 591794 66 + 760995 ACTTTTCAATATCATTTGGTGTTTAAA-TGAAAGAACCAGCTTTTGTTGCAAAATTCAAGGCAACTC i dasNov3.JH569188 I 536 C 0 e otoGar3.GL873575 10964293 13 - 12073884 I e aotNan1.NW_018494782v1 1522762 355 - 1813869 T e cebCap1.NW_016107695v1 1274081 2 - 2164891 I e canFam3.chr1 56190359 28 + 122678785 I a score=36426.000000 s hg38.chr6_KB021644v2_alt 123456 5 + 185823 ACTGG s panTro5.chr6 173579702 5 + 175400573 ACTGG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171813353 5 + 173848474 ACTGG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11496161 5 - 12463322 ACTGG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156325061 5 + 157873769 ACTGG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170351695 5 + 172585720 ACTGG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169096968 5 - 170955103 ACTGG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8383577 5 + 10161646 ACTGG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1415274 5 + 3144229 ACTGG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96701603 5 + 98384682 ACTGG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8237420 5 - 10857215 ACTGG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15629135 5 - 23502949 ACTGG i colAng1.NW_012114488v1 C 0 C 0 s saiBol1.JH378287 1311977 5 - 2905041 GCTGC i saiBol1.JH378287 C 0 C 0 s dasNov3.JH569188 591860 5 + 760995 ACTCG i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10964293 13 - 12073884 I e aotNan1.NW_018494782v1 1522762 355 - 1813869 T e cebCap1.NW_016107695v1 1274081 2 - 2164891 I e calJac3.chr4 169908854 442 + 171630274 T e canFam3.chr1 56190359 28 + 122678785 I a score=59576.000000 s hg38.chr6_KB021644v2_alt 123461 6 + 185823 TCTGGA s panTro5.chr6 173579707 6 + 175400573 TCTGGA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171813358 6 + 173848474 TCTGGA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11496166 6 - 12463322 TCTGGA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156325066 6 + 157873769 TCTGGA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170351700 6 + 172585720 TCTGGA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169096973 6 - 170955103 TCTGGA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8383582 6 + 10161646 TCTGGA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1415279 6 + 3144229 TCTGGA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96701608 6 + 98384682 TCTGGA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8237425 6 - 10857215 TCTGGA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15629140 6 - 23502949 TCTGGA i colAng1.NW_012114488v1 C 0 C 0 s saiBol1.JH378287 1311982 6 - 2905041 TCTGGA i saiBol1.JH378287 C 0 T 451 s otoGar3.GL873575 10964306 6 - 12073884 TTTAGG i otoGar3.GL873575 I 13 C 0 s canFam3.chr1 56190387 6 + 122678785 TTTAGA i canFam3.chr1 I 28 C 0 s dasNov3.JH569188 591865 6 + 760995 TCTGGA i dasNov3.JH569188 C 0 C 0 e aotNan1.NW_018494782v1 1522762 355 - 1813869 T e cebCap1.NW_016107695v1 1274081 2 - 2164891 I e calJac3.chr4 169908854 442 + 171630274 T a score=76338.000000 s hg38.chr6_KB021644v2_alt 123467 12 + 185823 TATTCTGTTTTA s panTro5.chr6 173579713 12 + 175400573 TATTCTGTTTTA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171813364 12 + 173848474 TATTCTGTTTTA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11496172 12 - 12463322 TATTCTGTTTTA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156325072 9 + 157873769 TATT---GTTTA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170351706 12 + 172585720 TATTCTGTTTTA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169096979 12 - 170955103 TATTCTGTTTTA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8383588 12 + 10161646 TATTCTGTTTTA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1415285 12 + 3144229 TATTCTGTTTTA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96701614 12 + 98384682 TATTCTGTTTTA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8237431 12 - 10857215 TATTCTGTTTTA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15629146 12 - 23502949 TATTCTGTTTTA i colAng1.NW_012114488v1 C 0 C 0 s otoGar3.GL873575 10964312 12 - 12073884 TATTTTCTTTGA i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56190393 12 + 122678785 TATTTTGTTCCA i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 591871 12 + 760995 TCCTATGAATCA i dasNov3.JH569188 C 0 C 0 e saiBol1.JH378287 1311988 451 - 2905041 T e aotNan1.NW_018494782v1 1522762 355 - 1813869 T e cebCap1.NW_016107695v1 1274081 2 - 2164891 I e calJac3.chr4 169908854 442 + 171630274 T a score=739517.000000 s hg38.chr6_KB021644v2_alt 123479 121 + 185823 TGTCTT--------------ACTTGACTACACACTTAAACTCTATGAAAAT-GGTTCTGTGTCTGTTCTCTAAGATTAGGAGCTCCCTTCTTTCA------CAAATAAGGGAAAAGTACACTGAAAAAAAATGTTTGTAAGT s panTro5.chr6 173579725 127 + 175400573 TGTCTT--------------ACTTGACTACACACTTAAACTCTATGAAAAC-GGTTCTGTGTCTGTTCTCTAAGATTACGAGCTCCCTTCTTTCATATCCACAAATAAGGGAAAAGTACACTGAAAAAAAATGTTTGTAAGT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171813376 127 + 173848474 TGTCTT--------------ACTTGACTACACACTTAAACTCTATGAAAAT-GGTTCTGTGTCTGTTCTCTAAGATTAGGAGCTCCGTTCTTTCATATCCACAAATAAGGGAAAAGTACACTGAAAAAAAATGTTTGTAAGT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11496184 127 - 12463322 TGTCTT--------------ACTTGACTACACACTTAAACTCTATGAAAAC-GGTTCTGTGTCTGCTCTCTAAGATTAGGAGCTCCCTTCTTTCATATCCACAAATAAGGGAAAAGTACACTGAAAAAAAATGTTTGTAAGT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156325081 126 + 157873769 AGTCTT--------------ACTTGACTACACACTTAAACTCTACGAAAACAGGTTCTGTGTCCGTTCTCTAAGATTAGGAGCTCCCTTCTTTCATATCCACACGTAAGGGAAAAGTACACCG-AAAAAAATGTTTGTAAG- i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170351718 141 + 172585720 TGTCTTGACTACACACTTAAACTTGACTACACACTTAAACTCTATGAAAACAAGTTCTGTGTCTGTTCTCTGAGATTAGTAACTCCCTTCTTTCATATCCACAGATAAGGGAAAAGTACACCG-AAAATAATGTTTGTAGGT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169096991 141 - 170955103 TGTCTTGACTACACACTTAAACTTGACTACACACTTAAACTCTATGAAAACAAGTTCTGTGTCTGTTCTCTGAGATTAGTAACTCCCTTCTTTCATATCCACAGATAAGGGAAAAGTACACCG-AAAATAATGTTTGTAGGT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8383600 141 + 10161646 TGTCTTGACTACACACTTAAACTTGACTACACACTTAAACTCTATGAAAACAAGTTCTGTGTCTGTTCTCTGAGATTAGTAACTCCCTTCTTTCATATCCACAGATAAGGGAAAAGTACACCG-AAAATAATGTTTGTAGGT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1415297 127 + 3144229 TGTCTT--------------ACTTGACTACACACTTAAACTCTATGAAAACAGGTTCTGTGTCTGTTCTCTGAGATTAGTAACTCCCTTCTTTCATATCCACAAATAAGGGAAAAGTACACCG-AAAATAATGTTTGTAAGT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96701626 127 + 98384682 CGTCTT--------------ACTTGACTACACACTTAAACTCTATGAAAACAGGTTCTGTGTCTGTTCTCTGAGATCAGTAACTCCCTTCTTTCATATCCACAAATAAGGGAAAAGTACACCG-AAAATAATGTTTGTAAGT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8237443 127 - 10857215 TGTCTT--------------ACTTGACTACACACTTAAACTCTATGAAAACAGGTTCTGTGTCTGTTCTCTGAGATTAGTAACTCCCTTCTTTCATATCCACAAATAAGGGAAAAGTACACCG-AAAATAATGTTTGTAAGT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15629158 123 - 23502949 CGTCTT--------------ACTTGACTACACACTTAAACTCTATGAAAACAGGTTCTGTGTCTGTTCTCTGAGATTAGTAACTC----CTTTCATATCCACAAATAAGGGAAAAGTACACCG-AAAATAATGTTTGTAAGT i colAng1.NW_012114488v1 C 0 C 0 s otoGar3.GL873575 10964324 125 - 12073884 AATTTT--------------ATTTTACTACAAATATAAACTCCATAAATACATGTTCCATGTTCATACTCTAAAATTAGTGGTTCTCTTCTTTCATATCTAAAAATAAGGAAAAATT-CTCTG-AAAGGAATATTTG-AAGT i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56190405 125 + 122678785 CATTTT--------------ATTTGACTACAAATATAAAGTCTAAG-ATATATATTCTGGGCTTATACTTAAAAGCTAAT-GTTTTTTTTTTTTTCATTTCCAAAAAAAGGACAAGTGGTTCA-ACTAGAATATATGAAAGT i canFam3.chr1 C 0 C 0 e saiBol1.JH378287 1311988 451 - 2905041 T e aotNan1.NW_018494782v1 1522762 355 - 1813869 T e cebCap1.NW_016107695v1 1274081 2 - 2164891 I e calJac3.chr4 169908854 442 + 171630274 T e dasNov3.JH569188 591883 0 + 760995 C a score=6006.000000 s hg38.chr6_KB021644v2_alt 123600 1 + 185823 A s panTro5.chr6 173579852 1 + 175400573 A i panTro5.chr6 C 0 C 0 s panPan2.chr6 171813503 1 + 173848474 A i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11496311 1 - 12463322 A i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170351859 1 + 172585720 A i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169097132 1 - 170955103 A i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8383741 1 + 10161646 A i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1415424 1 + 3144229 A i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96701753 1 + 98384682 A i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8237570 1 - 10857215 A i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15629281 1 - 23502949 A i colAng1.NW_012114488v1 C 0 C 0 s canFam3.chr1 56190530 1 + 122678785 A i canFam3.chr1 C 0 C 0 e otoGar3.GL873575 10964449 0 - 12073884 C e saiBol1.JH378287 1311988 451 - 2905041 T e aotNan1.NW_018494782v1 1522762 355 - 1813869 T e cebCap1.NW_016107695v1 1274081 2 - 2164891 I e calJac3.chr4 169908854 442 + 171630274 T e dasNov3.JH569188 591883 0 + 760995 C e nomLeu3.chr3 156325207 0 + 157873769 C a score=1592867.000000 s hg38.chr6_KB021644v2_alt 123601 293 + 185823 ATTTCTAggccaggcgcagtggctcacgcctgtaatcccagcactttgagaggccaagacaggtggattacctgaagtcagaagtgcaataccagcctggtcaatatggtgaaaccccgtctctaccaaaaatacaaaacgttagccaggcgtggtgatgtgtgcctgtggtcccagctactcaggaggctgaggcaggagaatcgcttgaacctaggaggcagaggttgtagtgagccaagatcgcgccactgcactccagcctcagcgacagagcaagactccatctc---------aaa s panTro5.chr6 173579853 293 + 175400573 ATTTCTAggccaggcgcagtggctcacgcctgtaatcccagcactttgagaggccaagacgggtggatcacctgaagtcagaagtgcaataccagcctggtcaatacggtgaaaccccgtctctaccaaaaatacaaaacgttagccaggcgtggtgatgtgtgcctgtggtcccagctgctcaggaggctgaggcaggagaatcgcttgaacctaggaggcagaggttgtagtgagccaagatcgcgccactgcactccagcctcagcgacagagcaagactccatctc---------aaa i panTro5.chr6 C 0 C 0 s panPan2.chr6 171813504 294 + 173848474 ATTTCTAggccaggcgcagtggctcacgcctgtaatcccagcactttgagaggccaagacgggtggatcacctgaagtcagaagtgcaataccagcctggtcaatacggtgaaaccccgtctctaccaaaaatacaaaacgttagccaggcgtggtgatgtgtgcctgtggtcccagctactcaggaggctgaggcaggagaatcgcttgaacctaggaggcagaggttgtagtgagccaagatcgcgccactgcactccagcctcagcgacagagcaagactccatctc--------aaaa i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11496312 295 - 12463322 ATTTCTAggccaggcgcagtggctcacgcctgtaatcccagcactttgagaggccaagacaggtggattacctgaagtcggaagtgcaataccagcctggtcaatacggtgaaaccctgtctctaccaaaaatacaaaacgttagccaggcgtggtgatgtgtgcctgtggtcccagctactcaggaggctgaggcaggagaatcgcttgaacctaggaggcagaggttgtagtgagccaagatcgcgccactgcactccagcctcagcgacagagcaagactccatctc-------aaaaa i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156325207 296 + 157873769 -----TAggccaggcgcaatggctcacgcctgtaatcccagcactttgagaggctgagacaggcggattacctgaagtcagaagtgcaagaccagcctggtcaacatggtgaagccccgtctctactacaaatacaaagtgttagccaggcgtggtgatgtgtgcctgtggtcccagctactcaggaggctgaggcaggagaatcgcttgaacc-aggaggcggaggttgtagtgagccaagactgcgccactgcactccagcctcagcaacacagcgagactccatctcaaaaaaaaaaaa i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170351860 293 + 172585720 ATTTCTAggccaggcgcagtggctcacacctgtaatcccagcactttgagaggccgaggcaggcagattacctgagatcagaagtgcaagaccagcctggtcaatacagtgaaatcctgtctctactaaaaatacaaaacattagtcaggtgtggtgatgtgtgcctgtggtccaagctactcaggaggctgaggcagaagaatcacttgaacccaggaggcggaggttgtagtgagctgagatcgtgccactgcactctagccttggcgacagagcaagattccatttc---------aaa i rheMac8.chr4 C 0 I 15 s macFas5.chr4 169097133 293 - 170955103 ATTTCTAggccaggcgcagtggctcacacctgtaatcccagcactttgagaggccgaggcaggcagattacctgagatcagaagtgcaagaccagcctggtcaatacagtgaaatcctgtctctactaaaaatacaaaacattagtcaggtgtggtgatgtgtgcctgtggtccaagctactcaggaggctgaggcagaagaatcacttgaacccaggaggcggaggttgtagtgagccgagatcgtgccactgcactctagccttggcgacagagcgagattccatctc---------aaa i macFas5.chr4 C 0 I 15 s macNem1.NW_012011000v1 8383742 276 + 10161646 ATTTCTAggccaggcgcagtggctcacacctgtaatcccagcactttgagaggccgaggcag-------------gatcagaagtgcaagaccagcctggtcaatacagtgaaatcctgtctctactaaaaatacaaaacattagtcaggtgtggtgatgtgtgcctgtggtccaagctactcaggaggctgaggcagaagaatcacttgaacccaggaggcggaggttgtagtgagctgagatcgtgccactgcactctagccttggcgacagagcgagattccatct------------- i macNem1.NW_012011000v1 C 0 I 9 s cerAty1.NW_012002071v1 1415425 292 + 3144229 ATTTCTAggccaggcgcagtggctcacacctgtaatcccagcactttgagaggccgaggcaggcagattacctgagatcagaagtgcaagaccagtctggtcaatacggtgaaatcctgtctctactaaaaatacaaaacattagtcaggtgtggtgatgtgtgcctgtggtccaagctactcaggaggctgaggcagaagaatcacttgaa-ccaggaggcagaggttgtagtgagccgagatcgtgctgctgcactccagccttggcaacagagcgagactccatctc---------aaa i cerAty1.NW_012002071v1 C 0 I 14 s chlSab2.chr13 96701754 293 + 98384682 ATTTCTAggccaggtgcagtggctcacgcctgtaataccagcactttgagcggccgaggcaggcagattaccggagatcagaagtgcaagaccagcctggtcaatacagtgaaaccctgtctctactaaaaatacaaaacattagtcaggtgcggtgatgtgtgcctgtggtccaagctactcaggaggctgaggcagaagaatcacttgaacccaggaagcagaggttgtagtgagccgagatcgtgccactgcactctagccttggcgacagagcgagattccatctc---------aaa i chlSab2.chr13 C 0 I 15 s manLeu1.NW_012106474v1 8237571 293 - 10857215 ATTTCTAggccaggcgcagtggttcacgcctgtaatcccagcactttgagaggccgaggcaggcagattacctgagatcagaagtgcaagaccagcctggtcaatacggtgaaaccctgtctctactaaaaatacaaaacattagtcaggtgtggtgatgtgtgcctgtggtccaagctactcaggaggctgagggagaagaatcacttgaacccaggaggcagaggttgtagtgagccgagatcgtgctactgcactccagccttggcaacagagcgagactccatctc---------aaa i manLeu1.NW_012106474v1 C 0 I 19 s colAng1.NW_012114488v1 15629282 291 - 23502949 ATTTCTAggccaggcgcagtggctcacgcctgtaatcccagcactttgagaggccaaggcacgcagat--cctgagatcagaagtgcaagaccagcctggtcaatacggtgaaatcctgtctctactaacaatacaaaacattagtcaggtatggtgatgtgtgcctgtggtccaagctactcaggaggctgaggcagaagaatcacttgaacccacgaggcggaggttgtagtgagccgagatcgtgccactgcactccagccttggtgacagagcgagactccatctc---------aaa i colAng1.NW_012114488v1 C 0 T 779 e otoGar3.GL873575 10964449 0 - 12073884 C e saiBol1.JH378287 1311988 451 - 2905041 T e aotNan1.NW_018494782v1 1522762 355 - 1813869 T e cebCap1.NW_016107695v1 1274081 2 - 2164891 I e calJac3.chr4 169908854 442 + 171630274 T e dasNov3.JH569188 591883 0 + 760995 C e canFam3.chr1 56190531 0 + 122678785 C a score=76802.000000 s hg38.chr6_KB021644v2_alt 123894 18 + 185823 aaaaaaaaaaaggaaaTC s panTro5.chr6 173580146 18 + 175400573 aaaaaaaaaaaggaaaTC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171813798 18 + 173848474 aaaaaaaaaaaggaaaTC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11496607 18 - 12463322 aaaaaaaaaaaggaaaTC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156325503 18 + 157873769 aaaaaaaaaaaggaaaGC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170352168 18 + 172585720 aaaaaaaaaaagaaaaGC i rheMac8.chr4 I 15 C 0 s macFas5.chr4 169097441 18 - 170955103 aaaaaaaaaaagaaaaGC i macFas5.chr4 I 15 C 0 s macNem1.NW_012011000v1 8384027 18 + 10161646 aaaaaaaaaaagaaaaGC i macNem1.NW_012011000v1 I 9 C 0 s cerAty1.NW_012002071v1 1415731 18 + 3144229 aaaaaaaaaaaGGAAAGC i cerAty1.NW_012002071v1 I 14 C 0 s chlSab2.chr13 96702062 18 + 98384682 gaaaaaaaaTTGAAAAGC i chlSab2.chr13 I 15 C 0 s manLeu1.NW_012106474v1 8237883 18 - 10857215 aaaaaaaaaaaGGAAAGC i manLeu1.NW_012106474v1 I 19 C 0 e otoGar3.GL873575 10964449 0 - 12073884 C e saiBol1.JH378287 1311988 451 - 2905041 T e aotNan1.NW_018494782v1 1522762 355 - 1813869 T e cebCap1.NW_016107695v1 1274081 2 - 2164891 I e calJac3.chr4 169908854 442 + 171630274 T e dasNov3.JH569188 591883 0 + 760995 C e colAng1.NW_012114488v1 15629573 779 - 23502949 T e canFam3.chr1 56190531 0 + 122678785 C a score=4664.000000 s hg38.chr6_KB021644v2_alt 123912 1 + 185823 T s panTro5.chr6 173580164 1 + 175400573 T i panTro5.chr6 C 0 C 0 s panPan2.chr6 171813816 1 + 173848474 T i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11496625 1 - 12463322 T i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156325521 1 + 157873769 T i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170352186 1 + 172585720 T i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169097459 1 - 170955103 T i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8384045 1 + 10161646 T i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1415749 1 + 3144229 T i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96702080 1 + 98384682 T i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8237901 1 - 10857215 T i manLeu1.NW_012106474v1 C 0 C 0 s otoGar3.GL873575 10964449 1 - 12073884 C i otoGar3.GL873575 C 0 C 0 e saiBol1.JH378287 1311988 451 - 2905041 T e aotNan1.NW_018494782v1 1522762 355 - 1813869 T e cebCap1.NW_016107695v1 1274081 2 - 2164891 I e calJac3.chr4 169908854 442 + 171630274 T e dasNov3.JH569188 591883 0 + 760995 C e colAng1.NW_012114488v1 15629573 779 - 23502949 T e canFam3.chr1 56190531 0 + 122678785 C a score=836728.000000 s hg38.chr6_KB021644v2_alt 123913 162 + 185823 ATTTCTATACTTTGAATGCTCACTTTTTAATAATTCTGTGTTTGTTAGTATCCCAGAAG---CTGATTCTATTTATGAAA--AATGCACCTGATATCCTGAGAACACTGCCAAGTGTGCACTCTGGATTGGCCTCTGCACACACAATTGTCCAGTTGCTGA----------------------------G---GGCTG s panTro5.chr6 173580165 161 + 175400573 ATTTCTA-ACTTTGAATGCTCCCTTTTTAATAATTCTGTGTTTGTCAGTATCCCAGAAG---CTGATTCTATTTATGAAA--AATGCACCTGATATCCTGAGAACACTGCAAAGTGTGCACTCTGGTTTGGCCTCTGCACACACAATCGTCCAGTTGCAGA----------------------------G---GGCTG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171813817 162 + 173848474 ATTTCTATACTTTGAATGCTCCCTTTTTAATAATTCTGTGTTTGTCAGTATCCCAGAAG---CTGATTCTATTTATGAAA--AATGCACCTGATATCCTGAGAACACTGCAAAGTGTGCACTCTGGATTGGCCTCTGCACACACAATCGTCCAGTTGCAGA----------------------------G---GGCTG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11496626 162 - 12463322 ATTTCTATACTTTGAATGCTCCCTTTTTAATAATTCTGTGTTTGTCAGTATCCCAGAAG---CTGATTCTACTTATGAAA--AATGCACCTGATATCCTGAGAACACTGCAAAGTGTGCACTCTGAATTGGCCTCTGCACACACAATCGTCCAGTTGCCGA----------------------------G---GGCTG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156325522 162 + 157873769 ATTTCTATACTTTGAATGCTCACTTTTTAATAATTCTGTGTTTGTCAGTATCCCAGAAG---CTGATTCTATTTATGAAA--AATGCACCTGATATCCTGAGAACACTGCAAAGTGTGCACTCTGGACTGGCCTCTGCACACACAATTGTCCAGTTGCTGA----------------------------G---GGCTG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170352187 160 + 172585720 ATTTCTATACTTTGAATGCTCACTTTTTAATAATTC--TGTTTGTCAGTATCCCAGAAG---TTGATTCTATTTATGAAA--AATGCACCTGACATCCTGAGAACACTGCAAAGTGTGCAATCTGGACTGGCCTCTGTGCACACAATTGTCCGGTTGCTGA----------------------------G---GGCTG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169097460 160 - 170955103 ATTTCTATACTTTGAATGCTCACTTTTTAATAATTC--TGTTTGTCAGTATCCCAGAAG---TTGATTCTATTTATGAAA--AATGCACCTGACATCCTGAGAACACTGCAAAGTGTGCAATCTGGACTGGCCTCTGTGCACACAATTGTCCGGTTGCTGA----------------------------G---GGCTG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8384046 160 + 10161646 ATTTCTATACTTTGAATGCTCACTTTTTAATAATTC--TGTTTGTCAGGATCCCAGAAG---TTGATTCTATTTATGAAA--AATGCACCTGACATCCTGAGAACACTGCAAAGTGTGCAATCTGGACTGGCCTCTGTGCACACAATTGTCCGGTTGCTGA----------------------------G---GGCTG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1415750 162 + 3144229 ATTTCTATACTTTGAATGCTCACTTTTTAATAATTCCGTGTTTGTCAGTATCCTAGAAG---CTGATTCTATTTATGAAA--AATGCACCTGACATCCTGAGAACACTGCAAAGTGTGCAATCTGGACTGGCCTCTGTGCACACAATTGTCCAGTTGCTGA----------------------------G---GGCTG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96702081 162 + 98384682 ATTTCTATACTTTGAATGCTCACTTTTTAATAATTCTGTGTTTGTCAGTATCCTAGAAG---CTGATTCTATTTATGAAA--AATGCACCTGACATCCTGAGAACACTGCAAAGTGTGCAATCTGGACTGGCCTCTGTGCACACAATCGTCCAGTTGCTGA----------------------------G---GGCTG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8237902 160 - 10857215 ATTTCTATACTTTGAATGCTCACTTTTTAATAATTC--TGTTTGTCAGTATCCCAGAAG---TTGATTCTATTTATGAAA--AATGCACCTGACATCCTGAGAACACTGCAAAGTGTGCAATCTGGACTGGCCTCTGTGCACACAATTGTCCAGTTGCTGA----------------------------G---GGCTG i manLeu1.NW_012106474v1 C 0 C 0 s otoGar3.GL873575 10964450 185 - 12073884 ATTTCTGTATTTTGGGTTCCTGTTTTTTAGTAATTCTGTGCATCTCAGT-----AGAAGTCACTGATCTCACATGTTGAA--AGTGCTTTGCATGTACAGAGAGCCCTGCGGCACAGGAAACCGGGG-TGGACTCTGCGCACAAA--CGCCGAGTTCCTGAGACGTGCTGTTGCCTCCTCACAGCACACG---GGCTG i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56190531 156 + 122678785 ATTTCTGTATTTTGAATATT---TTTGAAACAAATCTGTATGTTTTGGTAGCTCAGATT---CTG--------TATTAAAGGGAGGCCTCAGATATATTGAGAACATTGTGATAAATGGAATCTGAGTTGGACTTTGCACACGTGAATTTTAAGCTTCTGA----------------------------GCATGGCTG i canFam3.chr1 C 0 I 1700 e saiBol1.JH378287 1311988 451 - 2905041 T e aotNan1.NW_018494782v1 1522762 355 - 1813869 T e cebCap1.NW_016107695v1 1274081 2 - 2164891 I e calJac3.chr4 169908854 442 + 171630274 T e dasNov3.JH569188 591883 0 + 760995 C e colAng1.NW_012114488v1 15629573 779 - 23502949 T a score=1323674.000000 s hg38.chr6_KB021644v2_alt 124075 280 + 185823 CCCCGAGCTGAGC-------------------------------------------------------------ACTGCTTTGCGAATGTTGGATGAGCACTTACCTTAGGC-TTAGCTGCACGAGAGCCCTGGAGCAGTGTGGGGTTTGTGAAAGAGCACAGGCTCCCCTGGTGCCCAGCGAAC-------CTGGTGGAGTGAGATGAGTTTCCCCTTATGACAAGGGAAATAAAGATGGGATGAAGCATCCACT---GGGACAGCCCAA-GGGCCGGGGTCCTAAAGGCCAAGGGCATTCAGATGC-TGACGCTGGAGGCCTCCTCAGT-GAGGGAAGCCAGTGCCTGCCCTG s panTro5.chr6 173580326 280 + 175400573 CCCCGAGCTGAGC-------------------------------------------------------------ACTGCTTTGCGAATGTTCGATGAGCACTTACCTTAGGC-TTAGCTGCACGAGAGCCCTGGAGCAGTGTGGGGTTTGTGAAAGAGCACAGGCTCCCCTGGTGCCCAGCGAAC-------CTGGTGGAGTGAGATGAGCTTCCCCTCATGACAAGGGAAATAAAGATGGGATGAAGCATCCACT---GGGACAGCCCAA-GGGCCGGGGTCCTAAAGGCCAAGGGCATTCAGATGC-TGACACTGGAGGCCTCCTCAGT-GAGGGAAGCCAGTGCCTGCCCTG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171813979 280 + 173848474 CCCCGAGCTGAGC-------------------------------------------------------------ACTGCTTTGCGAATGTTCGATGAGCACTTACCTTAGGC-TTAGCTGCACGAGAGCCCTGGAGCAGTGTGGGGTTTGTGAAAGAGCACAGGCTCCCCTGGTGCCCAGCGAAC-------CTGGTGGAGTGAGATGAGCTTCCCCTCATGACAAGGGAAATAAAGATGGGATGAAGCATCCACT---GGGACAGCCCAA-GGGCCGGGGTCCTAAAGGCCAAGGGCATTCAGATGC-TGACACTGGAGGCCTCCTCAGT-GAGGGAAGCCAGTGCCTGCCCTG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11496788 280 - 12463322 CCCCGAGCTGAGC-------------------------------------------------------------ATTGCTTTGCGAATGTTGGATGAGCACTTACCTTAGGC-TTAGCTGCACGAGAGCCCTGGAGCAGTGTGGGGTTTGTGAAAGAGCACAGGCTCCCCTGGTGCCCAGCGAAC-------CTGGTGGAGTGAGATGAGCTTCCCCTCATGACAAGGGAAATAAAGATGGGATGAAGCATCCACT---GGGACAGCCCAA-GGGCTGGGGTCCTAAAGGCCAAGGGCATTCAGACAT-TGACGCTGGAGGCCTCCTCAGT-GAGGGAAGCCAGTGCCTGCCCTG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156325684 287 + 157873769 CCCCGAGCTGAGC-------------------------------------------------------------ATTGCTTTGCGAATGTTGAATGAGCACTTACCTTATGC-TTAGCTGCACGAGAGCCCTGAAGCAGTGTGGGGTTTGTGAAAGAGCACAGGCTCCTCTGGTGCCCAGCGAACCTCCACGCTGGTGGAGAGGGACGAGTTCCCCCTCATGACAAGGGATATAAAGATGGGATGAAGCATCCACT---GGGACAGCCCAA-GGGCCAGGGTCCTAAAGGCCGAGGGCATTCAGATGC-TGACGCTGGAGGCCTCTTCAGT-GAGCGAAGCCGGCGCCTGCCCTG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170352347 290 + 172585720 CCCCGAGCTGAGC-------------------------------------------------------------ATTGCTTTGCGAATGTTGAATGAGCACTTACTCTATGC-TTAGCTGCACAAGAGCCCTGAAGCAGTGTGGGGTTTGTGGAAGAACATGGGCTCCTCTGGTGCTCAGCGAGCCTCCACACTGGTGGAGAAAGACGAGTTTCCCCTGGTGACAAGGGAAATAAAGATGGGATGAAGCATCCGCCATGGGAACAGCCCCA-GGGCTGGGGTCCTAAAGGCCGAGGGCATTCAGATGC-TGACGCTGGAGGCCTCCTCAGT-GAGGGAAGCCAGCGCCTGCACTG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169097620 290 - 170955103 CCCCGAGCTGAGC-------------------------------------------------------------ATTGCTTTGCGAATGTTGAATGAGCACTTACTCTATGC-TTAGCTGCACAAGAGCCCTGAAGCAGTGTGGGGTTTGTGGAAGAACATGGGCTCCTCTGGTGCTCAGCGAGCCTCCACACTGGTGGAGAAAGACGAGTTTCCCCTGGTGACAAGGGAAATAAAGATGGGATGAAGCATCCGCCATGGGAACAGCCCCA-GGGCTGGGGTCCTAAAGGCCGAGGGCATTCAGATGC-TGACGCTGGAGGCCTCCTCAGT-GAGGGAAGCCAGCGCCTGCACTG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8384206 290 + 10161646 CCCCGAGCTGAGC-------------------------------------------------------------ATTGCTTTGCGAATGTTGAATGAGCACTTACTCTATGC-TTAGCTGCACAAGAGCCCTGAAGCAGTGTGGGGTTTGTGGAAGAACATGGGCTCCTCTGGTGCTCAGCGAGCCTCCACACTGGTGGAGAAAGACGAGTTTTCCCTGGTGACAAGGGAAATAAAGATGGGATGAAGCATCCGCCATGGGAACAGCCCCA-GGGCTGGGGTCCTAAAGGCCGAGGGCATTCAGATGC-TGACGCTGGAGGCCTCCTCAGT-GAGGGAAGCCAGCGCCTGCACTG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1415912 290 + 3144229 CCCCAAGCTGAGC-------------------------------------------------------------ATTGCTTTGcgaatgttgaatgagcacttactctatgc-ttagctgcacgagagccctgaagcaatgtggggtttgtggaagagcatgggctcctctggtgctcagcgagcctccacactggtggagaaagacGAGTTTCCCCTGGTGACAAGGGAAATAAAGATGGAAAGAAGCATCCGCCATGGGAACAGCCCCA-GGGCCGGGGTCCTAAAGGCCGAGGGCATTCAGATGC-TGACGCTGGAGGCCTCCTCAGT-GAGGGAAGCCAGCGCCTGCACTG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96702243 290 + 98384682 CCCTGAGCTGAGC-------------------------------------------------------------ATTGCTTTGCGAATGTTGAATGAGCACTTACTCTATGC-TTAGCTGCACAAGAGCCCTGAAGCAATGTGGGGTTTGTGGAAGAGCATGGGCTCCTCTGGTGCTCAGTGAGCCTCCACGCTGGTGAAGAAAGACGAGTTTCCCCTCGTGACAAGGGAAATAAAGATGGAATGAAGCATCCACCTCGGGAACAGCCCCA-GGGCCAGGGTCCTAAAGGCCGAGGGCATTCAGATGC-TGATGCTGGAGGCCTCCTCAGT-GAGGGAAGCCAGCGCCTGCACTG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8238062 290 - 10857215 CCCCGAGCTGAGC-------------------------------------------------------------ATTGCTTTGcgaatgttgaatgagcacttactctatgc-ttagctgcacaagagccctgaagcaatgtggggtttgtggaagagcatgggctcctctggtgctcagcgagcctccacactggtggagaaagacGAGTTTCCCCTGGTGACAAGGGAAATAAAGACGGGATGAAGCATCCGCCATGGGAACAGCCCCA-GGGCCGGGGTCCTAAAGGCCGAGGGCATTCAGATGC-TGACGCTGGAGGCCTCCTCAGT-GAGGGAAGCCAGCGCCTGCACTG i manLeu1.NW_012106474v1 C 0 C 0 s otoGar3.GL873575 10964635 340 - 12073884 CCTGGGACGGGCCCTGTCATCGGCTGACTGTTCCTTCCTTAGCCCCACCAGGTTCCTCTCAGACATGCGGACTGATTGCTGTGCAAAAGTTCAAGAAGCACCTGCCACGTACTTTAATTGTGCAGTTGCACTGAAGTGGGGTGGAGTTTACAGAAAAGGGTGAGCCACCC--ACACTCAGTGGGTCTACGGGCAG--GGAGAGAAGCAAAGTCATGATCACAGCCAGGAAGAAAAGGACAGGACGCAGAACACCCTGGCAGGAGAGCCCAGTAGGCCA--GTCATAGA-------GGTACTCAGACACGTGATGCTGGGGGCTTCACTGGCAGCATGGAACTGGGGCCCAGCC-- i otoGar3.GL873575 C 0 C 0 e saiBol1.JH378287 1311988 451 - 2905041 T e aotNan1.NW_018494782v1 1522762 355 - 1813869 T e cebCap1.NW_016107695v1 1274081 2 - 2164891 I e calJac3.chr4 169908854 442 + 171630274 T e dasNov3.JH569188 591883 0 + 760995 C e colAng1.NW_012114488v1 15629573 779 - 23502949 T e canFam3.chr1 56190687 1700 + 122678785 I a score=765040.000000 s hg38.chr6_KB021644v2_alt 124355 100 + 185823 GTGGGGAGGATGGGAGCACCTGGCCACACAGAGAAGAAGGGAAGAGGA-CGACTCGGCACGAAGCCGGCTTTGAAACTTGACTGGGAGGGAGTCCAGCAAG s panTro5.chr6 173580606 100 + 175400573 GTGGGGAGGATGGGAGCACCTGGCCACACAGAGAAAAAGGGAAGAGGA-CGACTCGGCACGAAGCCGGCTTTGAAACTTGACTGGGAGGGAGTCCAGCAAG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171814259 100 + 173848474 GTGGGGAGGATGGGAGCACCTGGCCACACAGAGAAAAAGGGAAGAGGA-CGACTCGGCACGAAGCCGGCTTTGAAACTTGACTGGGAGGGAGTCCAGCAAG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11497068 100 - 12463322 GTGGGGAGGATGGGAGCACCTGGCCACACAGAGAAAAAGGGAAGAGGA-CGACTCGGCACGAAGCCGGCTTTGAAACTTGACTGGGAGGGAGTCCAGCAAG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156325971 100 + 157873769 GTGGGGAGGATGGGAGCACCAGGCCACACAGAGGAGAAGGGAAGAGGG-CGACGCGGCACGGAGCCGGCTTTGAAACTTGATTGGGAGGGAGTCCAGCAAA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170352637 100 + 172585720 GTGGGGAGGATGGGAACACCTGGCCACAGAGAGAGGAAGGGAAGAGGA-CGACTCGGCACGAGGCTGGCTTTGAAACTTGATTGGGAGGGAGTCCAGCAAA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169097910 100 - 170955103 GTGGGGAGGATGGGAACACCTGGCCACAGAGAGAGGAAGGGAAGAGGA-CGACTCGGCACCAGGCTGGCTTTGAAACTTGATTGGGAGGGAGTCCAGCAAA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8384496 100 + 10161646 GTGGGGAGGATGGGAACACCTGGCCACAGAGAGAGGAAGGGAAGAGGA-CGACTCGGCACGAGGCTGGCTTTGAAACTTGATTGGGAGGGAGTCCAGCAAA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1416202 100 + 3144229 GTGGGGAGGATGGGAACACCTGGCCACAGAGAGAGGAAGGGAAGAGGA-TGACTCGGCACGAAGCCGGCTTTGAAACTTGATTGGGAGGGAGTCCAGCAAA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96702533 100 + 98384682 GTGGGGAGGATGGGAACACCTGGCCACAGAGAGAGGAAGGGAAGAGGA-CGACTCGGCATGAAGCTGGCTTTGAAACTTGATTGGGAGGGAGTCCAGCAAA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8238352 100 - 10857215 GTGGGGACGATGGGAACACCTGGCCACAGAGAGAGGAAGGGAAGAGGA-TGACTCGGCACGAAGCCGGCTTTGAAACTTGATTGGGAGGGAGTCCAGCAAA i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169908412 101 + 171630274 GTGGGGCGGATGGGGGCGTCTGGCCAGGCGGGGAGGAAGGGAAGAGGACTGACTCCGTGTGAAGCCGGATTTGGGAGCTTACTATAAGGGAGTCCAGCAAA i calJac3.chr4 T 442 C 0 s saiBol1.JH378287 1311537 100 - 2905041 GTGGGGCGGCT-GGGGCATCTGGCCAGGCGGGGAGGAAGGGAAGAGGAGCGACTCCGTGTGAAGCCAGATTTGGAACTTCACTGGAAGGGAGTCAGGCAAA i saiBol1.JH378287 T 451 C 0 s cebCap1.NW_016107695v1 1274083 101 - 2164891 GTGGGGCGGCTGGGGGCATCTGGCCAGGCAGGGAGGAAGGGAAGAGGACCGACTCTGTGTGAAGCCGGATTTGGAGCTTTACTGGAAGGGAGTCCGGCAAA i cebCap1.NW_016107695v1 I 2 C 0 s aotNan1.NW_018494782v1 1522407 101 - 1813869 GTGGGGCAGATGGGGGCATCTGGCCAGGCGGGGAGGAAGGGAAGAGGACTGACTCCGTGTGAAGCCGGATCTGGAACTTTACCGGAAGGGAGTCCGGCGAA i aotNan1.NW_018494782v1 T 355 C 0 s otoGar3.GL873575 10964975 87 - 12073884 --ACCGGGGATGGGGGACCTGGGCCGCAGGGATGAGGCTGCAGAAGTG-CTGGTGTCCACACAGC---------AGCTCCAAGGGAGGGAAG--AAGCAGA i otoGar3.GL873575 C 0 C 0 e dasNov3.JH569188 591883 0 + 760995 C e colAng1.NW_012114488v1 15629573 779 - 23502949 T e canFam3.chr1 56190687 1700 + 122678785 I a score=606209.000000 s hg38.chr6_KB021644v2_alt 124455 69 + 185823 AACG------GAGCCAGGCAGGTTTATTCACTGATTGTTCA---TCTTTTCATTCTCGGCTTGTGCAGGAGTCCAGAG s panTro5.chr6 173580706 69 + 175400573 AACG------GAGCCAGGTAGGTTTATTCACTGATTGTTCA---TCTTTTCATTCTCAGTTTGTGCAGGAGTCCAGAG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171814359 69 + 173848474 AACG------GAGCCAGGTAGGTTTATTCACTGATTGTTCA---TCTTTTCATTCTCGGCTTGTGCAGGAGTCCAGAG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11497168 69 - 12463322 AACG------GAGCCAGGTAGGTTTATTCACTGATTGTTCA---TCTTTTCATTCTCAGCTTGTGCAGGAGTCCAGAG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156326071 69 + 157873769 AACG------GAGCCAGGTAGGTTTATTCACTGATGGTTCA---TCCTTTTATTCTTGGCTTGTCCAGGAGTCCAGGG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170352737 75 + 172585720 AACAGGTAAGGAGCTAGGTAAGTTTATTCACTAATTGTTCA---TCCTTTTGTTCTTGGCTTGTCCAGGAGTCCAGAG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169098010 75 - 170955103 AACAGGTAAGGAGCTAGGTAAGTTTATTCACTAATTGTTCA---TCCTTTTGTTCTTGGCTTGTCCAGGAGTCCAGAG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8384596 75 + 10161646 AACAGGTAAGGAGCTAGGTAAGTTTATTCACTAATTGTTCA---TCCTTTTGTTCTTGGCTTGTCCAGGAGTCCAGAG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1416302 75 + 3144229 AACAGGTAAGGAGCTAGGTAAGTTTATTCACTAATTGTTCA---TCCTTTTATTCTTGGCTTGTCCAGGAGTCCAGAG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96702633 75 + 98384682 AACAGGTAAGGAGCTAGGTAAGTTTATTCACTAATTGTTCA---TCCTTTTATTCTTGGCTTGTCCAGGAGTCCAGAG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8238452 75 - 10857215 AACAGGTAAGGAGCTAGGTAAGTTTATTCACTAATTGTTCA---TCCTTTTATTCTTGGCTTGTCCAGGAGTCCAGAG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15628794 69 - 23502949 AACA------GAGCCAGGCAGTTTTATTCACTGATTGTTCA---TGCTTTTATTCTTGGCTTATCCAGGAGTCCAGAG i colAng1.NW_012114488v1 T 779 C 0 s calJac3.chr4 169908513 71 + 171630274 ACCC------TAGCCAGGCACTTTTATTCACTGATTGATTGTTCTCCTTGTATTCTGGCT-TGTCCAGGAGTCTAGAG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1311637 68 - 2905041 AACC------GAGCCGGGCAGTTTGATTCACTAATTGCTAA---TCCTTGTATTCTCAGC-TGTCCAGGAGTCCAGAG i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1274184 68 - 2164891 AACT------GAGCCAGGCAGTTTTATTCACTAATTGCTAA---TCCTTGTATTCTCGGC-TGTCCAGAAGTCCAGAG i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1522508 69 - 1813869 AACC------GAGCCAGGCAGTTTTATTCACTAATTGTTCA---TCCTTGTATTCTCGGCTTGTCCAGGAGTCCAGAG i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10965062 67 - 12073884 AACT------GAGCCGAG-ACCTTCATTTACAAATTGTTCA---TCTTTTTCAGTTTGGTTT-TCTAGGAGTCCAGAG i otoGar3.GL873575 C 0 I 1768 e dasNov3.JH569188 591883 0 + 760995 C e canFam3.chr1 56190687 1700 + 122678785 I a score=12000.000000 s hg38.chr6_KB021644v2_alt 124524 1 + 185823 C s panTro5.chr6 173580775 1 + 175400573 C i panTro5.chr6 C 0 C 0 s panPan2.chr6 171814428 1 + 173848474 C i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11497237 1 - 12463322 C i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156326140 1 + 157873769 C i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170352812 1 + 172585720 C i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169098085 1 - 170955103 C i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8384671 1 + 10161646 C i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1416377 1 + 3144229 C i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96702708 1 + 98384682 C i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8238527 1 - 10857215 C i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15628863 1 - 23502949 C i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169908584 1 + 171630274 C i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1311705 1 - 2905041 C i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1274252 1 - 2164891 C i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1522577 1 - 1813869 C i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10965129 1768 - 12073884 I e dasNov3.JH569188 591883 0 + 760995 C e canFam3.chr1 56190687 1700 + 122678785 I a score=2478350.000000 s hg38.chr6_KB021644v2_alt 124525 280 + 185823 TATTTTAAACAGCA------CCGTTAGAACCGTCTCTGCAAACAACATCTACTGCTGTGCTGACCGTGGACAGGTCTCCGCCAAGCCGTGGCTCCTGTTGTCCTGACATAGACGCTGCCATTTTAACACAGACCTCAAGGGGCTGGTGGCTGGACCCACGCGG---CCGTCACTGCCCCGACCCAGCAGAACCCCGTGGGCGTGGTTGCACAC--GTCTCCCACTAACGTTCAGCATCAAAAGTCGGGGGATCGACATTTATTGCAAAGTTCAAGACAGCTCACTGGTCT-G s panTro5.chr6 173580776 280 + 175400573 TATTTTAAACAGCA------CCGTTAGAACCGTCTCTGCAAACAACGTCTACTGGTGTGCTGACCGTGGACAGGTCTCCGCCAAGCCGTGGCTCCTGTTGTCCTGACATAGACGCTGCCATTTTAACACAGACCTCAAGGGGCTGGTGGCTGGACCTGAGCGG---CCGTCACTGCCCCGACCCAGCAGAACCCCATGGGCGTGGTTGCACAC--GTCTCCCACTAACGTTCAGCATCAAAAGTCGGGGGATCGACGTTTATTGCAAAGTTCAAGACAGCTCACTGGTCT-G i panTro5.chr6 C 0 C 0 s panPan2.chr6 171814429 280 + 173848474 TATTTTAAACAGCA------CCGTTAGAACCGTCTCTACAAACAACGTCTACTGGTGTGCTGACCGTGGACAGGTCTCCGCCAAGCCGTGGCTCCTGTTGTCCTGACATAGACGCTGCCATTTTAACACAGACCTCAGGGGGCTGGTGGCTGGACCTGCGCGG---CCGTCACTGCCCCGACCCAGCAGAACCCCGTGGGCGTGGTTGCACAC--GTCTCCCACTAACGTTCAGCATCAAAAGTTGGGGGATCGACATTTATTGCAAAGTTCAACACAGCTCACTGGTCT-G i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11497238 278 - 12463322 TATTTTAAACAGCA------CCGTTAGAACCGTCTCTGCAAACAACGTCTACTGGTATGCTGACTGTGGACAGTTCTCCGCCAAGCCGTGGCTCCTGTTGTCCTGACATAGACGCTGCCATTTTA--ACAGACCTCAAGGGGCTGGTGGCTGGACCTGCGCGG---CCGTCACTGCCCCGACCCAGCAGAACCCCGTGGGCGTGGTTGCACAT--GTCTCCCACTAACGTTCAGCATCAAAAGTTGGGGGATCGACATTTATTGCAAAGTTCAACACAGCTCACTGGTCT-G i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156326141 281 + 157873769 TATTTTAAACAGCA------CCGTTAGAACCGTCTCTGCAAACACCGTCCGCTGGTGTGCTGACCGTGGACAGGTCTCCGCCAAGCCGTGGCTCCTGTCATCCTGACATAGACGCTGCCATTTTAACGCTGACCTCAAGGGGCTGGTGGCTGGACCTGCGCGG---CCGTCACTGTCCCGACCCAGCAGAATCCCGTGGGTGTGGTTGCACAC--ATCTCCCACTAACGTTCAGCATCAAAAGTCGGGGGATTGATGTTTATTGCAAAATTCAAGACAGCTCACTGGTCTGG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170352813 280 + 172585720 TATTTTAAACAGCA------TCGTCAGAACCATCTCTGCAAACACCGCCTGCTGGTGTGCTGGCCGTGGACAGGTCTCTGCCAAGCCGTGGCTCCTGTCGTCCTGACTTAGATGCTGCCGTTTTAACGCTGACCTCAAGGGGCTGGTGGCTGGACCTGCGTGG---CCATCACTGCCCCGACCTAGCAGAACCCCGTGGGCGTGGCTTCACAC--GTCTCCCACTAACGTTCAGCATCGAAAGTTGGGGAATCCACGTTTGTTGCAAAGTTCAAGACAGCTCACTGGTCT-G i rheMac8.chr4 C 0 I 1 s macFas5.chr4 169098086 280 - 170955103 TATTTTAAACAGCA------TCGTCAGAACCATCTCTGCAAACACCGCCTGCTGGTGTGCTGGCCGTGGACAGGTCTCTGCCAAGCCGTGGCTCCTGTCGTCCTGACTTAGATGCTGCCGTTTTAACGCTGACCTCAAGGGGCTGGTGGCTGGACCTGCGTGG---CCATCACTGCCCCTACCTAGCAGAGCCCCGTGGGCGTGGCTTCACAC--GTCTCCCACTAACGTTCAGCATCGAAAGTTGGGGAATCCACGTTTGTTGCAAAGTTCAAGACAGCTCACTGGTCT-G i macFas5.chr4 C 0 I 1 s macNem1.NW_012011000v1 8384672 280 + 10161646 TATTTTAAACAGCA------TCGTCAGAACCATCTCTGCAAACACCGCCTGCTGGTGTGCTGGCCGTGGACAGGTCTCTGCCAAGCCGTGGCTCCTGTCGTCCTGACTTAGATGCTGTCGTTTTAACGCTGACCTCAAGGGGCTGGTGGCTGGACTTGCGTGG---CCATCACTGCCCCGACCTAGCAGAACCCCGTGGGCGTGGCTTCACAC--GTCTCCCACTAACGTTCAGCATCGAAAGTTGGGGAATCCACGTTTGTTGCAAAGTTCAAGACAGCTCACTGGTCT-G i macNem1.NW_012011000v1 C 0 I 1 s cerAty1.NW_012002071v1 1416378 280 + 3144229 TATTTTAAACAGCA------TCGTCTGAACCATCTCTGCAAACACCGCCTGCTGGTGTGCCGGCCGTGGACAGGTCTCTGCCAAGCCGTGGCTCCTGTTGTCCTAACTTAGACGCTGCCGTTTTAACGCTGACCTCAAGGGGCTGGTGGCTGGACCTGTGCGG---CCGTCACTGCCCTGACTTTGCAGAACCCCGTGGGCGTGGCTGCACGC--GTCTCCCACTAACGTTCAGCATTGAAAGTCGGAGCATCCACGTTTGTTGCAAAGTTCAAGACAGCTCACTGGTCT-G i cerAty1.NW_012002071v1 C 0 I 1 s chlSab2.chr13 96702709 280 + 98384682 TATTTTAAACAGCA------TCGTCAGAACCATCTCTGCAAACACCGCCTGCTGGTGTGCTGGCCGTGGACAGGTCTCTGCCAAGCCGTGGCTCCTGTCGTCCTGACTTAGATGCTGCTGTTTTAACGCTGACCTCAAGGGGCTGGTGGCTGGACCTGCGTGG---CCGTCACTGCCCTGACCCAGCAGAACCCTGTGGACGTGGCTTCACAC--GTCTCCCACTAACGTTCAGCATCGAAAGTCGGGGCATCCACGTTTGTTGCAAAGTTCAAGACCTCTCACTGGTCT-G i chlSab2.chr13 C 0 I 1 s manLeu1.NW_012106474v1 8238528 280 - 10857215 TATTTTAAACAGCA------TCGTCTGAACCACCTCTGCAAACACCGCCTGCTGGTGTGCCGGCCGTGGACAGGTCTCTGCCAAGCCGTGGCTCCTGTCGTCCTGACTTAGATGCTGCCGTTTTAACGCTGACCTCAAGGGGCTGGTGGCTGGACCTGTGCGG---CCGTCACTGCCCCGACTTTGCAGAACCCCGTGGGTGTGGCTGCATGC--GTCTCCCACTAACGTTCAGCATCGAAAGTCGGAGCATCCACGTTTGTTGCAAAGTTCAAGACAGCTCACTGGTCT-G i manLeu1.NW_012106474v1 C 0 I 1 s colAng1.NW_012114488v1 15628864 280 - 23502949 TATTTTAAACAGCA------TCCTTAGAACTGTCTCTGCAAACACTGTCCGCTAGTGTGCTGGCCATGGACAGATCTCCACCAAGCCATGGCTCCTGTCGTCCTGACTTAGACGCTGCCATTTTAACACTGACCTCAAGGGACTGGTGGCTGGACCTGCGCGG---CCGTCACTGCCCCAACCCAGCAGAACCCCGTGGGCATGGCTGCACAC--GTCTCCCACTAACGTTCAGCATCGAAAGTCGGGGAATCCACATTTATTGCAAAGTTCAAGACAACTCACTGGTCT-G i colAng1.NW_012114488v1 C 0 I 1919 s calJac3.chr4 169908585 271 + 171630274 TCCTTTCAACTGCA------TCGTTAGAATCATCTCTGCAGGCACT-TCGGCTGGTGTGCTGACCGTGG-CAGGTCTCTGCCAGGCCTCGGCTCCTGTCAGCCTGACGTGGATGCTGCCATGTTCACGCTGACCTCAGGGGGCTGGCGGCTGGACCTGCATGG---CCGTCCCTGTCCCGATACAGCAGAGCCCCGTGGACGTGGCTGCACACGTGTCTGCCACTAACCTTCAACATCTAAAGTCGGAGAGTTGACATTTAT--CAGAGTGGAAGACA-------GCTCT-G i calJac3.chr4 C 0 I 1 s saiBol1.JH378287 1311706 280 - 2905041 TACTTTAAACTGCA------TCGTTAGAACCGTCTCTACAGGCACC-TCGGCTGGTGTGCTGACCGTGG-CAGGTCTCTGCCAGGCCTCGGCTCCTGTCATCCTGACTTGGATGCTGCCGTGTTCACGCTGACCTCAGGGGGCTGGCAGCTGGACCCGCGTGG---CCGTCACTGTCCCGATACAGCAGAGCCCCGTGGACGTGGCCGCACACGTGTCTGCCACTAACCTTCAGCATCTGAAGTCAGAGAATTGACGTTTATTGCAGAGTGGAAGACAGCTCGCTGCTCT-G i saiBol1.JH378287 C 0 I 1 s cebCap1.NW_016107695v1 1274253 278 - 2164891 TACTTTAAACTGCA------TCGTGAGAACCGTCTCTGCAGGCACC-TCGGCTGGTGTGCTGACCATGG-CAGGTCTCTGCCAGGCCTCAGCTCCTGTCATCCTGACGTGGATGCTGCCGTGTTCACGCTGACCTCAGGGGGCTGGC-GCTGGACCTG-GTGG---CCGTCACTGTCTCGATACAGCAGAACCCCGTGGACGTGGCCACACACGTGTCTGCCACTAACCTTCAGCATCTAAAGTCAGAGAATTGACGTTTATTGCAGAGGTGAAGACAGCTCACTGCTCT-G i cebCap1.NW_016107695v1 C 0 I 1 s aotNan1.NW_018494782v1 1522578 280 - 1813869 TACTTTAAACTGCA------TCGTTAGAACCGTCTCTACAGGCACC-TCGGCTGGCATGCTGACCGTGG-CAGGTGTCTGCCAGGCCTCGGCTCCTGTCATCCTGATGTGGACGCTGCCGTGTTCACGCTGACCTCAGGGGGCTGGCAGCTGGACCTGCGTGG---CCGTCACTGTCCCGATACAGCAGAGCCCCGTGCACGTGGCTGCACACGTGTCTGCCACTAACCTTCAGCATCTAAAGTTGCAGAATTGACGTTTATTGCAGAGCTGAAGACAGCTCACTGCTCT-G i aotNan1.NW_018494782v1 C 0 I 1 s otoGar3.GL873575 10966897 226 - 12073884 TATTTTGAATAGCAGTGTTGTCTTTAGAGCTGTCTCTAAAAGCACCATTCTCTGGTAT-TTGCCTGTGGAAAGTTCCC--CCAGAGTCTGGCG--------------GTGGACTCCAGCGTTTCACAGCCG-CTGCGGGGAGCTGCAG---GGAGCTACGGGGAGCTTGTCACTTGTCAGA------------------GCGTCGCTGC---C--ACCTGCCG---------GGCAT-GAAGGTCAGAGT-----------TAGCAGCCTAAGGGAGAGCTCACTGCTCA-G i otoGar3.GL873575 I 1768 I 8 e dasNov3.JH569188 591883 0 + 760995 C e canFam3.chr1 56190687 1700 + 122678785 I a score=102997.000000 s hg38.chr6_KB021644v2_alt 124805 12 + 185823 ACCTCGAGGGTG s panTro5.chr6 173581056 12 + 175400573 ACCTCAAGGGTG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171814709 12 + 173848474 ACCTCGAGGGTG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11497516 12 - 12463322 ACCTCGACGGTG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156326422 12 + 157873769 ACCTCAAGGGTG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170353094 12 + 172585720 ACCTCGAGGGTG i rheMac8.chr4 I 1 C 0 s macFas5.chr4 169098367 12 - 170955103 ACCTCGAGGGTG i macFas5.chr4 I 1 C 0 s macNem1.NW_012011000v1 8384953 12 + 10161646 ACCTCGAGGGTG i macNem1.NW_012011000v1 I 1 C 0 s cerAty1.NW_012002071v1 1416659 12 + 3144229 ACCTCGAGGGTG i cerAty1.NW_012002071v1 I 1 C 0 s chlSab2.chr13 96702990 12 + 98384682 ACCTCAAGGGTG i chlSab2.chr13 I 1 C 0 s manLeu1.NW_012106474v1 8238809 12 - 10857215 ACCTCGAGGGTG i manLeu1.NW_012106474v1 I 1 C 0 s calJac3.chr4 169908857 12 + 171630274 ACCTTGGTGGTG i calJac3.chr4 I 1 C 0 s saiBol1.JH378287 1311987 12 - 2905041 ACCTCAACGGTG i saiBol1.JH378287 I 1 C 0 s cebCap1.NW_016107695v1 1274532 12 - 2164891 ACCTCAACAGTG i cebCap1.NW_016107695v1 I 1 C 0 s aotNan1.NW_018494782v1 1522859 12 - 1813869 ACCTCAACGGTG i aotNan1.NW_018494782v1 I 1 C 0 s otoGar3.GL873575 10967131 12 - 12073884 ACCTGGAGAGCC i otoGar3.GL873575 I 8 C 0 e dasNov3.JH569188 591883 0 + 760995 C e colAng1.NW_012114488v1 15629144 1919 - 23502949 I e canFam3.chr1 56190687 1700 + 122678785 I a score=681773.000000 s hg38.chr6_KB021644v2_alt 124817 90 + 185823 TCCCTTAGGCCCGTCTCTCAGAGTGTGCATTGGCTGTAATGGAGAAAGTGAGTTTTCCTTGGATTCTGCCCTGGTTTGACCTCATCACAC s panTro5.chr6 173581068 90 + 175400573 TCCCTGAGGCCCGTCTCTCAGAGTGTGCATTGGCTGTAACGGAGGAAGTGAGTTTTCCTTGGATTCTGCCCTGGTTTGACCTCATCACAC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171814721 90 + 173848474 TCCCTGAGGCCCGTCTCTCAGAGTGTGCATTGGCTGTAACGGAGAAAGTGAGTTTTCCTTGGATTCTGCCCTGGTTTGACCTCATCACAC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11497528 90 - 12463322 TCCCTGAGGCCCGTCTCTCAGAGTGTGCATTGGCTGTAATGGAGAAAGTGAGTTTTCCTTGGATTCTGCCCTGGTTTGACCTCATCACAC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156326434 90 + 157873769 TCCCTGAGGCCCGTCTCTCCGAGTGTGCATTGGCTGTAATGGAGAAAGTGAGTTTTCCTTGGATTCTACCCTGGTTTATGCTCATCACAC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170353106 90 + 172585720 TCCCTGAGGCCCATCTCTCCGAGTGTGCATTGGTTGTAATGGAGGAAGTGAGTTTTCCTTGGATTCTGTCCTGATTTGACCTCATCATGC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169098379 90 - 170955103 TCCCTGAGGCCCATCTCTCCGAGTGTGCATTGGTTGTAATGGAGGAAGTGAGTTTTCCTTGGATTCTGTCCTGATTTGACCTCATCATGC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8384965 90 + 10161646 TCCCTGAGGCCCATCTCTCCGAGTGTGCATTGGTTGTAATGGAGGAAGTGAGTTTTCCTTGGATTCTGTCCTGATTTGACCTCATCATGC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1416671 88 + 3144229 TCCCT--GGCCCATCTCTCCGAGTGTGCGTTGGTTGTAATGGAGGAAGTGAGTTTTCCTTGGATTCTGTCCTGGTTTGACCTCATCATGC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96703002 90 + 98384682 TCCCTGAGGCCCATCTCTCCGAGAGTGCATTGGTTGTAATGGAGGAAGTGAGTTTTCCTTGGATTCTGTCCTGGTTTGACCTCATCATGC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8238821 88 - 10857215 TCCCT--GGCCCATCTCTCCGAGTGTGCGTTGGTTGTAATGGAGGAAGTGAGTTTTCCTTGGATTCTGTCCTGGTTTGACCTCATCATGC i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169908869 90 + 171630274 TCCCTGAGACCTGCCTCTCTGAGTGCATGTGGATTGTTATGGAGAAAGTGAGTTTTCCTTGGATTCTGTCCTGGTCTGACCTCCTCGCAC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1311999 73 - 2905041 TCCCTGAGGCCTGCCTCTCCGGGTACGTGTCGACTGTTATGGAGAAAG-----------------CCGTCCTGGTCTGACCTCCTCGCAC i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1274544 90 - 2164891 TCCCTGAGACCTGCCTCTCCGAGTACGTGTTGATTGTTATGGAGAAAGTGAGTTTTCCTTGGATTCCATCCTGGTCTGACCTCCTCGCAC i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1522871 90 - 1813869 TCCCTGAGACCTGCCTCCCCGAGTGCGTGTTGATTGTTATGGAGAAAGTGAGTTTTCCTTGGATTCCATCCTGGTCTGACCTCCTCTCAC i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10967143 55 - 12073884 ACCCCTTGG---------AGGAGTGT-CCTCAGTCCTGGTGGGGGAAGTGGTCTTCCCCGGCAT-------------------------C i otoGar3.GL873575 C 0 C 0 s dasNov3.JH569188 591883 74 + 760995 TCCCTGATAACCGAGGACCCAAAGGAG--TTTATTTTAATGGAGAAACTGAATTTT--------------CTATTTTGACTGAATTATAC i dasNov3.JH569188 C 0 C 0 e colAng1.NW_012114488v1 15629144 1919 - 23502949 I e canFam3.chr1 56190687 1700 + 122678785 I a score=3625689.000000 s hg38.chr6_KB021644v2_alt 124907 420 + 185823 TCCAGGACACAGAGAGCCCGGCTG-GGTGATCAGAGATCGGTGTCCT---------CGGGGAGCCTGCAGT---GCCCCTGCTG---------AGGGCTTCAGGGGCT-C-AGGAGGTG-AAGTGGCTGACTCTAGGTAAAATGGGCTC-CGGG---AGAGGCACCTTTGTTTTAGGGTGGTTTTAGGATCATTAGGT-----GAAT-----------GCAGCGACCT------CACCCA------------ACTACGGCCTCAGGG----C------------CTGGCTCCCCTCAGCCCCCCGGGGCTTTGATGGTGGCCTTGGGACCTGTCCCAGAAGTTGCTGGCTGAGTACAACAGACCT-TTGCTGACCAAAGGAAGCAAGGAAAAGAGTTTAGCTGCTCAGGACAATGACTGC-ATTTAATGACCTCTCCTGCTAGAAAC-AAAAAAACAGTGGCTCAGGCCTGGGGATGAGAATCA--AGTTTTACAGATGGTGGC s panTro5.chr6 173581158 421 + 175400573 TCCAGGACACAAAGAGCCCGGCTG-GGCGATCAGAAATCGGTGTCCT---------CGGGGAGCCTGCAGT---GCCCCTGCTG---------AGGGCTTCAGGGGCT-C-AGGAGGTG-AAGTGGCTGACTCTAGGGAAAATGGGCTC-CGGG---AGAGGCACCTTTGTTTTAGGGTGGTTTTAGGATCATTAGGT-----GAAT-----------GCAGCGACCT------CACCCA------------ACTACGGCCTCAGGG----C------------CTGGCTCCCCTCAGCCCCCCGGGGCTTTGATGGTGGCCTTGGGACCTGTCCCAGAAGTTGCTGGCTGAGTACAACAGACCT-TTGCTGACCAAAGGAAGCAAGGAAAAGAGTTTAGCTGCTCAGGACAATGACTGC-ATTTAATGACCTCTCCTGCTAGAAACAAAAAAAACAGTGGCTCAGGCCTGGGGATGAGAATCA--AGTTTTATAGATGGTGGC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171814811 419 + 173848474 TCCAGGACACAGAGAGCCCGGCTG-GACGATCAGAGATCGGTGTCCT---------CGGGGAGCCTGCAGT---GCCCC-GCTG---------AGGGCTTCAGGGGCT-C-AGGAGGTG-AAGTGGCTGACTCTAGGGAAAATGGGCTC-CGGG---AGAGGCACCTTTGTTTTAGGGTGGTTTTAGGATCATTAGGT-----GAAT-----------GCAGCAACCT------CACCCA------------ACTACGGCCTCAGGG----C------------CTGGCTCCCCTCAGCCCCCCGGGGCTTTGATGGTGGCCTTGGGACCTGTCCCAGAAGTTGCTGGCTGAGTACAACAGATCT-TTGCTGACCAAAGGAAGCAAGGAAAAGAGTTTAGCTGCTCAGGACAATGACTGC-ATTTAATGACCTCTCCCGCTAGAAAC-AAAAAAACAGTGGCTCAGGCCTGGGGATGAGAATCA--AGTTTTACAGATGGTGGC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11497618 420 - 12463322 TCCAGGACACAGAGAGCCCGGCTG-GGTGATCAGAAATCGGTGTCCT---------CGGGGAGCCTGCAGT---GCCCCTGCTG---------AGGGCTTCAGGGGCT-C-AGGAGGTG-AAGTGGCTGACTCTAGGGAAAATGGGCTC-CGGG---AGAGGCACCTTTGTTTTAGGGTGGTTTTAGGATCATTAGGT-----GAAT-----------GCAGTGACCT------CACCCA------------ACTACGGCCTCAGGG----C------------CTGGCTCCCCTCAGCCCCCTGGGGCTTTGATGGTGGCCTTGGGACCTGTCCCAGAAGTTGCTGGCTGAGTACAACAGACCT-TTGCTGACCAAAGGAAGCAAGGAAAAGAGTTTAGCTGCTCAGGACAATTACTGC-ATTTAATGACCTCTCCTGCTAGAAAC-AAAAAAACAGTGGCTCAGGCCTGGGGATGAGAATCA--AGTTTTATAGATGGTGGC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156326524 419 + 157873769 TCCAGGACACAGAGAGCCCGGCTG-GGCGATCAGAGATCGGTGTCCT---------CGGGAAGCCTGCAGT---GCCCCTGCTG---------AGGGCTTCAGGGGCT-C-AGGAGGTG-AAGTGGCTGACTCTGGGGAAAATGGGCTC-CGGG---AGAGGCACCTTTGTTTTAGGGTGGTTTCAGGATTGTTAGGT-----GAAT-----------GTAGTGACCT------CACCCA------------ACTACGGCCTCAGGG----C------------CTGGCTCCCCTCAGCCCCGTGGGGCTTTGATGGTGGCCTTGGGACCTGTTCCAGAAGTTGCTGGCTGAGTACAACAGATCT-TTGCTGACCGAAGGAAGCAAGGAAAAGAGTTTGGCTGCTCAGGACAATAACTGC-ATTTAATGACCTCTCCTGCTAGAAAC--AAAAAGCAGTGGCTCAGGCCTGGGGATGAGAATCA--AGTTTTATAGATGGTGGT i nomLeu3.chr3 C 0 I 3 s rheMac8.chr4 170353196 419 + 172585720 TCCAGGACGCGGACAGCCCGGCTG-GGCAATCAGAGATTGATGTCCT---------CGGGGAGCCTGCGAT---GCTCCTGCTG---------AGAGCTTCAAGGGCT-C-AGGAGGTG-AAATGGCTGACTCTGGGGAAAATGGGCTC-CTGG---AGAGGCACCTTTGTTTCAGGGTGGTTTTAGGACTGTTTGGT-----GAAT-----------GCAGCAACCT------CACCCA------------ACTACGGCCTCAGGG----C------------CTGGCTCCCCTCAGCCCCGCGGGGCTTTGATGGTGACCTGGGGACCTGTCCCAGAAGTTGCTGGCTGAGTACAACAGACTT-TTGCTGACTGAAGGAAGCAAGGAAAAGAGTTTGGCTGCTCAGGACAATGACTGC-ATTTAATGACCTCTCCTGCTAGAAAC--AAAAACCAGTGGCTCAGGCCTGGGGATGAGAATCA--AGTTTCACAGATGGTGGC i rheMac8.chr4 C 0 I 3 s macFas5.chr4 169098469 419 - 170955103 TCCAGGACGCGGACAGCCCGGCTG-GGCGATCAGAGATTGATGTCCT---------CGGGGAGCCTGCGAT---GCTCCTGCTG---------AGAGCTTCAAGGGCT-C-AGGAGGTG-AAATGGCTGACTCTGGGGAAAATGGGCTC-CTGG---AGAGGCACCTTTGTTTCAGGGTGGTTTTAGGACTGTTTGGT-----GAAT-----------GCAGCAACCT------CACCCA------------ACTACGGCCTCAGGG----C------------CTGGCTCCCCTCAGCCCCGCGGGGCTTTGATGGTGACCTGGGGACCTGTCCCAGAAGTTGCTGGCTGAGTACAACAGACTT-TTGCTGACTGAAGGAAGCAAGGAAAAGAGTTTGGCTGCTCAGGACAATGACTGC-ATTTAATGACCTCTCCTGCTAGAAAC--AAAAACCAGTGGCTCAGGCCTGGGGATGAGAATCA--AGTTTCACAGATGGTGGC i macFas5.chr4 C 0 I 3 s macNem1.NW_012011000v1 8385055 419 + 10161646 TCCAGGACGCGGACAGCCCGGCTG-GGCGATCAGAGATTGATGTCCT---------CGGGGAGCCTGCGAT---GCTCCTGCTG---------AGAGCTTCAAGGGCT-C-AGGAGGTG-AAATGGCTGACTCTGGGGAAAATGGGCTC-CTGG---AGAGGCACCTTTGTTTCAGGGTGGTTTTAGGACTGTTTGGT-----GAAT-----------GCAGCAACCT------CACCCA------------ACTACGGCCTCAGGG----C------------CTGGCTCCCCTCAGCCCCGCGGGGCTTTGATGGTGACCTGGGGACCTGTCCCAGAAGTTGCTGGCTGAGTACAACAGACTT-TTGCTGACTGAAGGAAGCAAGGAAAAGAGTTTGGCTGCTCAGGACAATGACTGC-ATTTAATGACCTCTCCTGCTAGAAAC--AAAAACCAGTGGCTCAGGCCTGGGGATGAGAATCA--AGTTTCACAGATGGTGGC i macNem1.NW_012011000v1 C 0 I 3 s cerAty1.NW_012002071v1 1416759 419 + 3144229 TCCAGGACACCGAGAGCCTGGCTG-GGCGATCAGAGATGGGTGTCCA---------CGGGGAGCCTGCGGT---GCTCCTGCTG---------AGGGCTCCAGGGGCT-C-AGGAGGTG-AAGTGGCTGACTCTGGGGAAAATGGGCTC-CTGG---AGAGGCACCTTTGTTTCAGGGTGGTTTTAGGACTGTTTGGT-----GAAT-----------GCAGCGACCT------CACCCA------------ACTACGGCCTCAAGG----C------------CTGGCTCCCCTCAGCCCCGCGGGGCTTTGATGGTGGCCTGGGGACCTGTCCCAGAAGTTGCTGGCTCAGTACAACAGACTT-TTGCTGACTGAAGGAAGCAAGGAAAAGAGTTTGGCTGCTCAGGACAATGACTGC-ATTTAATGACCTCTCCTGCTAGACAC--GAAAACCAGTGGCTCAGGCCTGGGGATGAGAATCA--AGTTTCACAGATGGTGGC i cerAty1.NW_012002071v1 C 0 I 3 s chlSab2.chr13 96703092 414 + 98384682 TCCAGGACACGGAGAGCCCGGCTG-GGCGATCAGAGATGGGTGTCCT---------TGG-----CTGCGGT---GCTCCTGCTG---------AGGGCTTCAGGGGCT-C-AGGAGGTG-AAGTGGCTGACTCTGGGGAAAACGGGCTC-CTGG---AGAGGCACCTTTGTTTCAGGGTGATTTTAGGACTGTTTGGT-----GAAT-----------GCAGCGACCT------CACCCA------------ACTACAGCCTCAGGG----C------------CTGGCTCCCTTCAGCCCCGCAGGGCTTTGATGGTGGCCTGGGGACCTGTCCCAGAAGTTGCTGGCTCAGTACAACAGACTT-TTGCTGACTGAAGGAAGCAAGGAAAAGAGTTTGGCTGCTCAGGACAATGACTGC-ATTTAATGACCTCTCCTGCTAGAAAC--AAAAACCAGTGGCTCAGGCCTGGGGATGAGAATCA--AGTTTCACAGATGGTGGC i chlSab2.chr13 C 0 I 3 s manLeu1.NW_012106474v1 8238909 419 - 10857215 TCCAGGACACCCAGAGCCCGGCTG-GGCGATCAGAGATGGGTGTCCT---------TGGGGAGCCTGCGGT---GCTCCTGCTG---------AGGGCTTCAGGGGCT-C-AGGAGGTG-AAGTGGCTGACTCTGGGGAAAATGGGCTC-CTGG---AGAGGCACCTTTGTTTCAGGGTGGTTTTAGGACTGTTTGGT-----GAAT-----------GCAGCGACCT------CACCCA------------ACTACGGCCTCAGGG----C------------CTGGCTCCCCTCAGCCCCTCCGGGCTTTGATGGTGGCCTGGGGACCTGTCCCAGAAGTTGCTGACTCAGTACAACAGACTT-TTGCTGACTGAAGGAAGCAAGGAAAAGAGTTTGGCTGCTCAGGACAATGACTGC-ATTTAATGACCTCTCCTGCTGGACAC--AAAAACCAGTGGCTCAGGCCTGGGGATGAGAAGCA--AGTTTCACAGATGGTGGC i manLeu1.NW_012106474v1 C 0 I 3 s calJac3.chr4 169908959 417 + 171630274 TCTGGGACAGGGAGAGCCCAG--GCAGCGATCAGAGATGGGCGTGCT----------GGGGAGCCCTCATT---GCCCCTGCCG---------AGCATGTCAGGGGCT-C-GGGAGGGG-AAGCGGCAGACTCTGGGGAAAATGGACTC-TGGG---AGAGGCACCCGCGTTTGAAGGTGGTTTTAGGATTTTTGGGT-----GAAT-----------GCAGCGACCT------CACCCA------------ACTACGGCCTCAGGG----C------------CTCGCTCCCCACAGTGTTGAGAAGCTTTGACGGTGGCCTGGGGACCCGTCCCAGGAGTTGCTGACCGAGTACAACAGACTT-TTGCTGACTGAAGACAGCAAGGAAAAGAGTTTGGCTGCTCAGGACACTGACTGC-ATTTAATGATCTCTCATTAGGGAAAT--GAATGACGGTGGCTCAGGCTTGCAAATGAGAATCA--AGCTTCACAGACTGTGGC i calJac3.chr4 C 0 I 1 s saiBol1.JH378287 1312072 416 - 2905041 TCTGGGACAGGGGGAGCCCAG--G-GGCTATCAGAGATGGGTGTGCT----------GGGGAGCCCGCCTT---GCCCCTGCTG---------AGGGCGTCAGGGGCT-C-GGGAGGGG-AAGCGGCTGACTCTGGGGAAAATGGACTC-TGGG---AGAGGCACCTGTGTTTGAAGGTGGTTTTAAGATTTTTGGGT-----GAAG-----------GCAGTGACCT------CACCCG------------ACTACGGGCTCAAGG----T------------CTGGCTCCCCACGGTCTTGAGGGGCTTTGATGGTGGCCTGGGGACACGTCCCAGGAGTTGCTGGCTGAGTACAACAGACTT-TTGCTGACTGAAGGCAGCAAGGAAGGGAGTTTGGCTGCTCAGGACAATGACTGC-ATTTAATGATCTCTCCCGCTAGAAAC--AGAAGACAGTGGCTCAGGCCTGCAGATTAGAATCA--AGTTTCACAGATGGTGGC i saiBol1.JH378287 C 0 I 1 s cebCap1.NW_016107695v1 1274634 415 - 2164891 TCTGAGACAGGGAGAGCCCAG--GGGGCGATCAGAGTTGGGTGTGCT----------GGGGAGCCCGCATT---GCCCCTGCTG---------AGGGCGTCAGGGGCT-C-GGGAGGGG-AAGCGGCTGACTCTGGGGAAAATGGACTC-TGGG---AGTGGCATCTGTATCTGAAGCTGGTTTTAGGATTTTTGGGT-----GAAT-----------GCAGTGACCT------CACCCG------------ACTATGGCCTCAGGG----C------------CTGGCGCCCCA--GTCTCGAGGGACTTTGACGGTGGCCTGGGGACCTGCCCCAGGAGTTGCTGGCCGAGTACAACAGACTT-TTGCTGACTGAAGGCAGCAAGGAAGGGAGTTTAGCTGCTCAGGACAATGACTGC-ATTTAATGATCTCTCCTGCAAGAAAC--AAAAGACGGTGGCTCAGGCCTGCAAATTAGAATCA--AGTGTCACAGATGGTGGC i cebCap1.NW_016107695v1 C 0 I 1 s aotNan1.NW_018494782v1 1522961 411 - 1813869 TCTGGGACAGGGAGAGCCCGG--G-GGCGATCAGAGATGGATGTGCT----------GGGGAGCCCGCATT---GCCCCTGCTG---------AGGGCGTC--GGGCG-C-GGGAGGGG-AAGCCGCTGACTCT-GGGAAAATGGACTC-TGGG---AGAGGCACCTGTGTTTGAAGGGGGTTTTAGGGTTTTTGGAT-----GAAT-----------GCAGCGACCT------CGCCCA------------ACTACGGCCTCAGGG----C------------CTGGCTCCCCACAGTCTCAAG-GGCTTTGACGGTGGCCTGGGGACCCATCCCGGGAGTTGCTGGCCGAGTACAACAGACCT-TTGCTGACTGAAGGCAGCAAGGAAAGGAGTTTGGCTGCTGGGGACAATGACTGC-ATTTAATGATCTCTCCCGCTAGAAAC--GAAAGACAGTGGCTCAGGCCTGCAT-TTAGAATCG--AGTTTCACAGATGATGGC i aotNan1.NW_018494782v1 C 0 I 16 s otoGar3.GL873575 10967198 373 - 12073884 CCCAGGA-GTGGGGACACTGGCCA-G------AGGCCCGGGTGACCT-----------GGGCTGCTGCAGT---GAGGTCTGAG---------AGGGCTTCAGAGGCTGC-AGAAGGAGAAAATGGTTCTCTCTGGACAAGCCAGGCTT-TGGG---GAG-------CTGTTTTAGGATGGTTTTAGGATAATTGGGGCACCAAAAA-----------GCTGCAGGCC------CCCTGA------------ACTCC--CCTCACTGCGCCC------------CTGCTCTCCCTTGGGTCCGCA------TGGCAGCCGCCTCCGCACCTGCCAGGGGAACAGTTG--CAAAGAGCACAGACTC-C------CTGAAG-------------------------CCAAGAGAGCAGCTGA-GTCTGGTGACTGCTCCTGTCAGAAAC--AAAAACCACTGGCTCAGGCCTCGGGATCAGAACCA--GGCCTTACCGAGGGTGAC i otoGar3.GL873575 C 0 I 4 s canFam3.chr1 56192387 448 + 122678785 TCCTGTGCGCAGGGCCCCCAG----GCTGAGCAGATTTCCGTGGGCC---------TGGGGGATGTCCACTCGAGTCCCTGTGGGCTCAGAGCAGGTCTGCGGAGGCT-CTAGGAGGTA-GAACGTTCTGGTTCAGAGAAAATGGGGCC-TGGGGACAAAGACCCCGCTGGGGAGGAGGAATTCTCGGCTTGTTGGTG-----GAAT------CCCGGGCCGTGGCCTGGACCACACCCACCCCTTTCCTCCACTCCTGCTTCATGG----CACTGGCGGGAGTCTGTCTTCCTCAAGT---AAGGGTGCATCAAGGTGGCATCTGCACTAGTTCGTG-----------CAAGGACA--AGACCT-TTTCT-ACCCAAGGAAGCAAAGAACATGGTTTTGCCTCTTTGAGGAACCAGTGC-ATTTAATGACTCCTCCTGCTAGAAAC--AAAGG--ATTGGCTCTGGCCTTGAGATTAAGACCA--AATTTTACTGATGGTGAC i canFam3.chr1 I 1700 I 7 s dasNov3.JH569188 591957 435 + 760995 TCCATAAACTGGAGAGAT-------GGCCAAAAGATAAGCATGATCCAAAGGCCAGTGGAACACCTCAAGT---ACTTCATCTG---------AGGAATTT-----CC-T-AGGCTGT--AAATGATGAACTCTGAACAAAAGGGGATCTTGGG---AAAGGCACCTTTGGGGAAAATGAATCGTAGGAGAACCGGGG-----GGAGGAAAGTCACAAGCAGTGCCCTGGACC-AATCCA------------AATTCCTTTTTTAGA----G------------CTATTTTCCTTCAGGCTTGCGGGCATTTTAAAGAGGATTTGGACCGTGT--GAGGAACTGCTGGCCGAGTATAACAGATTTCTTGCTGACTTTGGGAAGAAAAGAAAATAGTTTGGCTGCTTGAGAGAATTACTGCTAATTAATGATGACTTTTGCTAGAAAC--AAAAACGATTGGATCAGGGTTTGGGATTAAAATCATTTTTTTTCCTGATGATGAT i dasNov3.JH569188 C 0 C 0 e colAng1.NW_012114488v1 15629144 1919 - 23502949 I a score=57831.000000 s hg38.chr6_KB021644v2_alt 125327 17 + 185823 ------AGGAGTTCAT-TACACTG-- s panTro5.chr6 173581579 17 + 175400573 ------GGGAGTTCAT-TACACTG-- i panTro5.chr6 C 0 C 0 s panPan2.chr6 171815230 17 + 173848474 ------AGGAGTTCAT-TACACTG-- i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11498038 17 - 12463322 ------AGGAGTTCAT-TACACTG-- i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156326946 17 + 157873769 ------AGGAGTTCAT-TACACTG-- i nomLeu3.chr3 I 3 C 0 s rheMac8.chr4 170353618 17 + 172585720 ------AGGAGTTCAT-TACACCA-- i rheMac8.chr4 I 3 C 0 s macFas5.chr4 169098891 17 - 170955103 ------AGGAGTTCAT-TACCCCA-- i macFas5.chr4 I 3 C 0 s macNem1.NW_012011000v1 8385477 17 + 10161646 ------AGGAGTTCAT-TACACCA-- i macNem1.NW_012011000v1 I 3 C 0 s cerAty1.NW_012002071v1 1417181 17 + 3144229 ------AGGAGTTCAT-CACACCA-- i cerAty1.NW_012002071v1 I 3 C 0 s chlSab2.chr13 96703509 17 + 98384682 ------AGGAGTTCAT-TACACCA-- i chlSab2.chr13 I 3 C 0 s manLeu1.NW_012106474v1 8239331 17 - 10857215 ------AGGATTTCAT-TACACCA-- i manLeu1.NW_012106474v1 I 3 C 0 s calJac3.chr4 169909377 15 + 171630274 ------GGGAGATCGT-CAAAC---- i calJac3.chr4 I 1 C 0 s saiBol1.JH378287 1312489 15 - 2905041 ------GGGAGATCAT-CAAAC---- i saiBol1.JH378287 I 1 C 0 s cebCap1.NW_016107695v1 1275050 15 - 2164891 ------GGGAGATCAT-CAAAC---- i cebCap1.NW_016107695v1 I 1 C 0 s otoGar3.GL873575 10967575 4 - 12073884 ------AGGG---------------- i otoGar3.GL873575 I 4 C 0 s canFam3.chr1 56192842 17 + 122678785 ------GGGTATCGGG-TATAATG-- i canFam3.chr1 I 7 C 0 s dasNov3.JH569188 592392 26 + 760995 GGGCCAAGGAAATCACATAAAATTTG i dasNov3.JH569188 C 0 C 0 e aotNan1.NW_018494782v1 1523372 16 - 1813869 I e colAng1.NW_012114488v1 15629144 1919 - 23502949 I a score=171820.000000 s hg38.chr6_KB021644v2_alt 125344 25 + 185823 AGCACAGCCAGC------CAGCGTCCTGCAG s panTro5.chr6 173581596 25 + 175400573 AGCACAGCCAGC------CAGCGTCCTGCAG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171815247 25 + 173848474 AGCACAGCCAGC------CAGCGTCCTGCAG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11498055 25 - 12463322 AGCACAGCCAGC------CAGCGTCCTGCAG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156326963 25 + 157873769 AGCACAGCCGGC------CAGCGTCCTGCAG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170353635 25 + 172585720 AGCACAGCCGGC------CAGCGTCCTGCAG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169098908 25 - 170955103 AGCACAGCCGGC------CAGCGTCCTGCAG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8385494 25 + 10161646 AGCACAGCCGGC------CAGCGTCCTGCAG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1417198 25 + 3144229 AGCACAGCCGGC------CAGCGTCCTGCAG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96703526 25 + 98384682 AGCCCAGCCGGC------CAGCGTCCTGCAG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8239348 25 - 10857215 AGCACAGCCGGC------CAGCGTCCTGCAG i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169909392 21 + 171630274 CGCACAGCTGGCGTCCCACAG---------- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1312504 19 - 2905041 GGCACAGCCGGC------CAGCGTC------ i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1275065 19 - 2164891 AGCACACCCGGC------CAGCGTC------ i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1523388 19 - 1813869 AGCACAGCCGGC------CGGCGTC------ i aotNan1.NW_018494782v1 I 16 C 0 s otoGar3.GL873575 10967579 24 - 12073884 ACCTCTGACTGC------C-GCATCCTGCAG i otoGar3.GL873575 C 0 I 1070 s canFam3.chr1 56192859 27 + 122678785 -TGACAGCCAACAAC---CAGTGTTGCTCAG i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 592418 25 + 760995 AGAGGAAACAGC------AAGTATTCTTCAA i dasNov3.JH569188 C 0 C 0 e colAng1.NW_012114488v1 15629144 1919 - 23502949 I a score=3002278.000000 s hg38.chr6_KB021644v2_alt 125369 414 + 185823 CTGCAAGTGCTCCAGGAAAGGCACCTCCACTTCTGGTCTCATCTCGAGGT-C---GG--TCTCAGTCAGC-TGGGAGTGAAAGGGAC--ACATTTACAAGTATTCTCT--------GGAGACAGTGCAAGGTGCTTCCTGCTGCCATCCAGGACAAGAGGCTCCTGTGCTGGGTGCCTGATACTCTGGCTGGGATGCTTGCATCCTCTCCTTTGCTTCTGCCTGGATCCCTCCCTC-CCAAACTTGGTGTCAGAA---GAGA-AGAGGGACCTCTGGGGACGCAAA-------CATCATTACCAAAACTTTAAGGCCACTTTTC-AACAAAAAGGGCATCTTTGAAAGACTTTCAGATCAGAAACAACGCTGTC----TCTACCCTCCCAC----CCCTCCAACCTCAGATTTGGGTGCAC-TACCATGCAGAA-----TATATCAAATCAGACTTTT s panTro5.chr6 173581621 417 + 175400573 CTGCAAGTGATCTGGGAAAGGCACCTCCACTTCTGGTCTCATCTCGAGGT-C---GG--TCTCAGTCAGC-TGGGAGCGAAAGGGAC--ACATTTACAAGTGTTCTCT--------GGAGACAGTGCAAGGTGCTTCCTGCTGCCATCCAGGACAAGGGGCTCCTGTGCTGGGTGCCTGATACTCCTGCTGGGATGCTTGCATCCTCTTCTTTGCTTCTGCCTGGATCCCTCCCTC-ACAAACTTTGTGTCAGAA---GAGA-AGAGGGACCTCTGGGGACGCAAA----CATCATCATTACCAAAACTTTAAGGCCACTTTTC-AACAAAAAGGGCATCTTTGAAAGACTTTCAGATCAGAAACAACGCTGTC----TCAACCCTCCCAC----CCCTCCAACCCCAGATTTGGGTGCAC-TACCATGCAGAA-----TATATCAAATCAGACTTTT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171815272 417 + 173848474 CTGCAAGTGATCTGGGAAAGGCACCTCCACTTCTGGTCTCATCTCAAGGT-C---GG--TCTCAGTCAGC-TGGGAGCGAAAGGGAC--ACATTTATAAGTGTTCTCT--------GGAGACAGTGCAAGGTGCTTCCTGCTGCCATCCAGGACAAGGGGCTCCTGCGCTGGGTGGCTGATACTCCCGCTGGGATGCTTGCATCCTCTCCTTTGCTTCTGCCTGGATCCCTCCCTC-ACAAACTTTGTGTCAGAA---GAGA-AGAGGGACCTCTGGGGACGCAAA----CATCATCATTACCAAAACTTTAAGGCCACTTTTC-AACAAAAAGGGCATCTTTGAAAGACTTTCAGATCAGAAACAACGCTGTC----TCAACCCTCCCAC----CCCTCCAACCCCAGATTTGGGTGCAC-TACCATGCAGAA-----TATATCAAATCAGACTTTT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11498080 417 - 12463322 CTGCAAGTGATCCGGGAAAGGCACCTCCACTTCTGGTCTCATCTCGAGGT-C---GG--TCTCAGTCAGC-TGGGAGCGAAAGGGAC--ACATTTACAAGTGTTCTCT--------GGAGACAGTGCAAGGTGCTTCCTGCTGCCATCCAGGACAAGGGGCTCCTGCGCTGGGTGCCTGATACTCCCGCTGGGATGCTTGCATCCTCTCCTTTGCTTCTGCCTGGATCCCTCCCTC-ACAAACTTTGTGTCAGAA---GAGA-AGAGGGACCTCTGGGGACACATA----CATCATCATTACCAAAACTTTAAGGCCACTTTTC-AACAAAAAGGGCATCTTTGAAAGACTTTCAGATCAGAAACAATGCTGTC----TCAACCCTCCCAC----CCCTCCAACCCCAGATTTGGGTGCAC-TACCATGCTGAA-----TATATCAAATCAGACTTTT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156326988 415 + 157873769 CTGCAAGTGATCTGGGAAAGGCAGCTCCACCTCTGTTCTCATCTCCAGGT-G---AG--TCTCAGTCAGC-TGGGAGCAAAAGGGAC--ACATTTACAAGTGTTCTCT--------GGAGACAGTGCAAGGTGCTTCCTGCTGCCATCCAGGACAAGGGGCTCCTGCGCTGGGTGCCTGATACTCCCGCTGGGATGCTTGTGTCCTCTCCTTTGCTTCTGCCTGGATCCCTCCCCC-ACAAACTTTGTGTCAGAA---GAGA-AGACCGACCTCTGGGGACACAAA----CATCATCATTGCCAAAACTTTAAGGCCACTTTTC-AACAAAAAGGGCATCTTTTAAAGACTTTCAGATCAGAA--AACACTGTC----TCAACCCTCCCAT----CCCTCCAACCCCAGATTTGTGTGTAC-TACCATGCAGAA-----GATATCAAATCAGACTTTC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170353660 417 + 172585720 CTGCACACGATCCACGAAAGGCACCTCCACCTCTGGTCTCATCTCAAGGT-C---TG--TCTCCGTCAGC-TGGGAGCGAAAGGGAC-AACATTTACAAGCGTTCTCT--------GGAGACAGTGCAAGGTGCGTCCTGGAGCCGTCTGGGACAAG-GGCTCCTGCGCCGGGTGCCTGATACTCCCAGTGCGACACTTGCATCCACTCCTTTGCTTCTGCCTGGATCTCTCCCCG-ACAAACTTTGTGTCAGAA---GAGA-AGAGGGACCTCTGGGGACATAAA----CATCATCGTTACCAAAACTTTAAGGCCACTTTTC-AACAAAAAGGACATCTTTTAAAGACTTTCAGATCAGAAACAACTCTGTC----TCAACCCTCCCAT----TCCTCCAACCCCAGATCTGTGTGCAC-TGCCATGCAGAA-----TATATCAAATCGGACTTTT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169098933 417 - 170955103 CTGCACACCATCCACGAAAGGCACCTCCACCTCTGGTCTCATCTCAAGGT-C---TG--TCTCCGTCAGC-TGGGAGCGAAAGGGAC-AACATTTACAAGCGTTCTCT--------GGAGACAGTGCAAGGTGCGTCCTGGTGCCGTCCGGGACAAG-GGCTCCTGCGCCGGGTGCCTGATACTCCCAGTGCGACACTTGCATCCACTCCTTTGCTTCTGCCTGGATCTCTCCCCG-ACAAACTTTGTGTCAGAA---GAGA-AGAGGGACCTCTGGGGACATAAA----CATCATCGTTACCAAAACTTTAAGGCCACTTTTC-AACAAAAAGGACATCTTTTAAAGACTTTCAGATCAGAAACAACGCTGTC----TCAACCCTCCCAT----TCCTCCAACCCCAGATCTGTGTGCAC-TGCCATGCAGAA-----TATATCAAATCGGACTTTT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8385519 417 + 10161646 CTGTACACGATCCACGAAAGGCACCTCCACCTCTGGTCTCATCTCAAGGT-C---TG--TCTCCGTCAGC-TGGGAGCGAAAGGGAC-AACATTTACAAGCGTTCTCT--------GGAGACAGTGCAAGGTGCGTTCTGGTGCCGTCCGGGACAAG-GGCTCCTGCGCTGGGTGCCTGATACTCCCAGTGCGACACTTGCATCCACTCCTTTGCTTCTGCCTGGATCTCTCCCCC-ACAAACTTTGTGTCAGAA---GAGA-AGAGGGACCTCTGGGGACATAAA----CATCATCGTTACCAAAACTTTAAGGCCACTTTTC-AACAAAAAGGACATCTTTTAAAGACTTTCAGATCAGAAACAACGCTGTC----TCAACCCTCCCAT----TCCTCCAACCCCAGATCTGTGTGCAC-TGCCATGCAGAA-----TATATCAAATCGGACTTTT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1417223 417 + 3144229 CTGCACGCGATCCACGAAAGGCACCTCCACCTCTGGTCTCATCTCAAGGT-C---TG--TCTCCGTCAGC-TGGGAGCGAAAGGGAC-AACATTTACATGCGTTCTCT--------GGAGACAGTGCAAGGTGCGTCCTGGTGCCGTCCAGGACAAG-GGCTTCTGCGCCGGGTGCCTGATACTCCCGGTGCCACACTTGCGTCCACTCCTTTGCTTCTGCCTGGATCTCTCCCCC-ACAGACTTTGTGTCAGAA---GAGA-AGAGGGACCTCTGGGGACATAAA----CATCATCGTTACCAAAACTTTAAGGCCACTTTTC-AACAAAAAGGGCATCTTTTAAAGACTTTCAGATCAGAAACAACGCTGTC----TCAACCCTCCCAT----TCCTCCCACCCCAGATCTGTGTGCAC-TGCCATGCAGAA-----TAGATCAAATCGGACTTTT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96703551 413 + 98384682 CTGCACACGATCCACGAAAGGCACCTCCACCTCTGGTCTCATCTCAAGGT-C---TG--TCTCAGTCAGC-TGGGAGCGAAAGGGAC-AACATTTCCAAGCGTTCTCT--------GCAGACAGTGCAAGGTGCTTCCTGGTGCCGTCCAGGACAAG-GGCTCCTGCGCCGGGTGCCTGATACTTCCGGTGGGATGCTTGCATCCACTCCTTTGCTTCTGCCTGGATCTCTCCCCG-ACAAACTTTGTGTCAGAA---GAGA-AGAGGGACCTCTGGGGACATAAA----CATCATCGTTACCAA----TTAAGGCCACTTTTC-AACAAAAAGGGCATCTTTTAAAGACTTTCAGATCAGAAACAACGCTGTC----TCAACCCTCCCAT----TCCTCCAACCCAAGATCTGTGTGCAC-TGCCATGCAGAA-----TATATCAAATCGGAATTTT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8239373 417 - 10857215 CTGCACACGATCCACGAAAGGCACCTCCACCTCTGGTCTCATCTCAAGGT-C---TG--TCTCCGTCAGC-TGGGAGCGAAAGGGAC-AACATTTACAAGCGTTCTCT--------GGAGACAGTGCAAGGTGCGTCCTGGTGCCGTCCAGGACGAG-GGCTTCTGCGCCGGGTGCCTGATACTCCCGGTGGGATGCTTGCATTCACTCCTTTGCTTCTGCCTGGATCTCTCCCCC-ACAGACTTTGTGTCAGAA---GAGA-AGAGGGACCTCTGGGGACATAAA----CATCATCGTTACCAAAACTTTTAGGCCACTTTTC-AACAAAAAGGGCATCTTTTAAAGACTTTCAGATCAGAAACAACGCTGTC----TCAGCCCTCCCAT----TCCTCCCACCCCAGATCTGTGTGCAC-TGCCGTGCAGAA-----TAGATCAAATCGGACTTTT i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169909413 352 + 171630274 CGGCAAGTGATTCCGGAAAAGCCCCTCCGCC-CTGGTCCCATCTCAGGGTCC---TG--TCTCAGTCGGC-C-GGAGTGAAAGGGAC-GACATTCACAGGCGTCCTCG--------GGAGACAGTGC-AGGTGTTTCCCGGCGCCGCCCAGGACAGG-GGCTCCCG---GGGGTGC----------------------CGTGTCCACACCTTTGCTTCTGCCGGGACCCCT-CCCC-ACAAACTTTCTGTCAGAA---GAGA-AGAGGGACCTCTGGGGACATAAA----TATCGTCATTACCAAAACTTTAAGGCCACTCTT----CAACAAGGACATCTTTTAAAGACTT-----TCAGA-------------------------------------TCAAGCCCGGATTTGTGGGCAC-CGCCATGCACGA-----TAGGTCGAATCGGACCTTT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1312523 377 - 2905041 CGGCAAGTGATTCCGGAAAAGCGCCTCCGCC-CTGGTCCCATCTCAGGGTCC---TG--TCTCCGTCGGC-CGGGAGCGAAAGGGAC-GACCTTCCCAAGTGTCCTCC--------GGAGACAGCGC-AGGTGCTTCCCGGTGCCGCCCGGGACAGG-GGCTCCCG---GGGGTGC----------------------TGTGTCCACGCCTTTGCTTCTGCCTGGACCCCTCCCCC-ACAAACTTTGTGTCAGAA---GAGA-AGAGGGACCTCTGGGGACATAAA----CATCATCATTACCAAAACTTTAAGGCCACTTTTC-AACAACAAGGACACCTTTTAAAGACTC--AGATCAGACGCGACG---------------CTCCCAT-----CCTCCAAGCCCAGATTTGTGTGTAC-CGCCATGCAGGG-----TAGGTCAGATGGGACCTTG i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1275084 380 - 2164891 TGGCAAGTGATTCCGGAAATGCGCCTCCGCC-CTGGTCCCATCTCAGGGTCC---TG--TCTCAGTCGGC-CGGTAGCGAAAGGGAC-CACATGCACCAGTGTCCTCG--------GGAGACAGTGC-AGGTGCTTCCCAGCGCCACCCAGGACAGG-GGCTCCTG---GGGGTGC----------------------TGTGTCCACGCCTTTGCCTCTGCCTGGATCCCTCCCCCAACAAACTTTGTGTCAAAA---GAGA-AGAGGGACCTCTGGGGACATAAA----CATCATCATTACCAAAACTTTAAGGCCACTTTTC-AACAACAAGGACATCTTTTAAAGGCTTTCAGATCAGAAACGATG---------------CTCCCAT-----CCTCCAAGCCCGGATTTGTGTGCAC-CGCCATGCAGGA-----TTGGTCGAATCGGACCTTT i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1523407 379 - 1813869 CTGCAAGTGATTCCGGAAAAGCGCCTCCGCC-CTGGTCCCACCTCAGGGTCC---CG--CCTCAGTCAGC-CGGGAGCGAAAGGGAC-GACGCTCACAAGCGTCCTTG--------GGAGACAGTGC-AGGTGCTTCCTGGCGCCGCCCAGGACAGG-GGCTCCCG---GGGATGC----------------------TGTGTCCACGCCTGTGCTTCTGCCTGGACCCCTCCCCC-ACAAACTTTGTGTCAGAA---GAGA-CGAGGGACCTCTGGGGACATAAA----CATCATCATTACCAAAACTTTAAGGCCACTTTTC-AACAACAAGGACATCTTTTAAAGACTTTCAGATCAGAAACGACA---------------CTCCCAT-----CCTCCGAGGCCGGATTTGTGTGCAC-CACCATGCAGGA-----CAGGTCGAATCGGACCTTT i aotNan1.NW_018494782v1 C 0 C 0 s canFam3.chr1 56192886 293 + 122678785 --------------------GTGTCCTCGCTGAAGGCCGAGGCCCATGGC-C---TGGACCCCGGTC------TGGGCAGCAGGGAG---------CAGCCTCCTTTG--------GGACACGCTGC----------------CCACACGGGCCAGA------CTG-----------------------------------GTCCCCTGCTCTGC----GCCTGG---------TG-AC----------CCAGGA---GGGACAGAAGGACCTT--GGAAAAGTAA----CGTCGTCATTACTAAGACTCGAAGATCACTTTGC-TAGATAAAGGACACTTTTACAAGAATGTCAGATCAGAAATGACATTGTC-------ATCTTCCTG---------------CCAAATTGGTGCACACTTGCTCCAGAGAA-----TACATGAAACCTGGGCTTC i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 592443 421 + 760995 ----------------GTATACACGTTAGCTTCTGAAC-CATGTCTGGAC-CCTGTG--TTTCAGTTAGCGCTAAAGTAAAGAAGGTGAAAATTTACAAGGTATCTTTACGAAGGGGCGGATAGTG--AGATGCTTCTAAGTATTTTCCAGGCAAAG-GGACTCTGCTATTTGTGTCTGATGATTCTAGTCAGAATCTTTTCTCTGCTCTTTT----CTGACTTAACTTCT-CCTA-AC-----TTATGCCAGAAGATGATA-AGGAAGATCTCAAGAAAAACAAAGGACTGTCATCATTGCCAAAACTTTAAAATCACTTTTTAAATAAAAAGAACATCTTGTAAAGATGATCAGATTGGAAATAACACTGTCCATCTCAACCCTCCCACCTTCTTCCCTAACATTTGCTGTGTATGC-T-TGCTACTGAAAAATAGGTATATAAAATCCAGGTTTT i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10967603 1070 - 12073884 I e colAng1.NW_012114488v1 15629144 1919 - 23502949 I a score=46062.000000 s hg38.chr6_KB021644v2_alt 125783 7 + 185823 GCTATGA s panTro5.chr6 173582038 7 + 175400573 ACTATGA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171815689 7 + 173848474 ACTATGA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11498497 7 - 12463322 ACTACGA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156327403 7 + 157873769 CCTACAA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170354077 7 + 172585720 ACTATGA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169099350 7 - 170955103 ACTATGA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8385936 7 + 10161646 ACTATGA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1417640 7 + 3144229 ACTATGA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96703964 7 + 98384682 ACTATGA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8239790 7 - 10857215 ACTATGA i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169909765 7 + 171630274 ACGATGA i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1312900 7 - 2905041 ATGATGA i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1275464 7 - 2164891 ATGATGA i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1523786 7 - 1813869 ATGATGA i aotNan1.NW_018494782v1 C 0 C 0 s dasNov3.JH569188 592864 7 + 760995 GTTGAGA i dasNov3.JH569188 C 0 I 1337 e otoGar3.GL873575 10967603 1070 - 12073884 I e colAng1.NW_012114488v1 15629144 1919 - 23502949 I e canFam3.chr1 56193179 0 + 122678785 C a score=1642499.000000 s hg38.chr6_KB021644v2_alt 125790 224 + 185823 TAATCTGACTTTTATCAAAGAGCACTGAGAGGGGACAGCCTGGCTGAAGACCACCCCAACAGCTGG-------tttttttttttttt---ttttcaatttttgagacaagatctcactctgtcacccaggctggagtgcagtgatgccatcacagctcactgcagcctcaaactcct-gggctaaagcaatcctcccacctcagcctcctgagtggctggaaccacgtgcctgca s panTro5.chr6 173582045 219 + 175400573 TAATCTGACTTTTATCAAAGAGCACTGAGAGGGGACAGCCTGGCTGAAGACCACCCCAACAGCTGG-------tttgtttttttttt--------aatttttgagacaagatctcactctgtcacccaggctggagtgcagtgatgccatcacagctcactgcagcctcaaactcct-gggctaaagcaatcctcccacctcagcctcctgagtggctggaaccacgtgcctgca i panTro5.chr6 C 0 C 0 s panPan2.chr6 171815696 217 + 173848474 TAATCTGACTTTTATCAAAGAGCACTGAGAGGGGACAGCCTGGCTGAAGACCACCCCAACAGCTGG-------tttgtttttttt----------aatttttgagacaagatctcactctgtcacccaggctggagtgcagtgatgccatcacagctcactgcagcctcaaactcct-gggctaaagcaatcctcccacctcagcctcctgagtggctggaaccacgtgcctgca i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11498504 227 - 12463322 TAATCTGACTTTTATCAAAGAGCACTGAGAGGGGACAGCCTGGCTGAAGACCACCCCAACAGCTGG-------tttttttttttttttttttttcaatttttgacacaagatctcactctgtcacccaggctggagtgcagtgatgccatcacaactcactgcagcctcaaactcct-gggctaaagcaatcctcccacctcagcctcctgagtggctggaaccacgtgcctgca i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156327410 218 + 157873769 TAATCTGCCTTTTATCAAAGAGCACTGAGAGGGGACAGCCTGGCTGAAGACCACCCCAACAGCTGA-------tttttttttttc----------aattttggagacaagatctcactctgtcacccaggctggagtgcagtgatgccatcacagctcactgcagcctcaaactcctggggctaaagcaatcttcccacctcagcctcctgagtggctggaaccacctgcctgca i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170354084 215 + 172585720 TAATCTGACTTTTATCAAAGAGCACTGAGAGGGGACAGCCTGACTGAAGACCA-CCCAACAGTTGA-------tttt-tttttta----------agtttttgagacagggtctcactctgtcacccaggctggagtgccatgatgccatcacggctcactgcagcctcagactcct-gggctaaagcgatcctcccacctcagcctcctgagtggctggaaccatgtgcctgca i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169099357 216 - 170955103 TAATCTGACTTTTATCAAAGAGCACTGAGAGGGGACAGCCTGACTGAAGACCA-CCCAACAGTTGA-------ttttctttttta----------agtttttgagacagggtctcactctgtcacccaggctggagtgccatgatgccatcacggctcactgcagcctcagactcct-gggctaaagcgatcctcccacctcagcctcctgagtggctggaaccatgtgcctgca i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8385943 215 + 10161646 TAATCTGACTTTTATCAAAGAGCACTGAGAGGGGACAGCCTGACTGAAGACCA-CCCAACAGTTGA-------tttt-tttttta----------agtttttgagacagggtctcactctgtcacccaggctggagtgccatgatgccatcacggctcactgcagcctcagactcct-gggctaaagtgatcctcccacctcagcctcctgagtggctggaaccatgtgcctgca i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1417647 216 + 3144229 TAATCTGACTTTTATCAAAGAGTACTGAGAGGGGACAGCCTGACTGAAGACCA-CCCAACAGTTGA-------ttttttttttta----------agtttttgagacagggtctcactctgtcacccaggctggagtgccatgatgccatcatggctcactgcagcctcagactcct-gggctaaagtgatcctcccacctcagccttctgagtggctggagccatgtgcctgca i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96703971 213 + 98384682 TAATCTGACTTTTATCAAAGAGCACTGAGAGGGGACAGCCTGGCTGAAGACCA-CCCAACAGCTGAtttttttttttttttttta----------agtttttgag----------actctgtcacccaggctggagtgcaatgatgccatcacggctcactgcagcctcagactcct-gggctaaagcgatcctcccacctcagcctcctgagtggctggaaccatgtgcctgca i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8239797 205 - 10857215 TAATCTGACTTTTATCAAAGAGCACTGAGAGGGGACAGCCTGGCTGAAGACCA-CCCAACAGCTGA-------ttttttttttta----------agtttttgagacagggtctcactctgtcacccaggctggagtgccatgatgccatcacag-----------ctcagactcct-gggctaaagcgatcctcccacctcagcctcctgagtggctggagccatgtgcctgca i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169909772 215 + 171630274 TATTCTGACTTGTGTCGAGTAGAACT--GGGGGTCCAGGCTGGCCAAAGACCACCCCAACAGCTGt-------ttgtttgttttt----------agtttttgagacaaggtgtcactctgtcacccaggctggggcggagtgacgccatcaccgctcactgcagcctcaaagtcct-gggctagagccatcctcccagctcagcctcctcagtggctggagccatatgcatgca i calJac3.chr4 C 0 I 1 s saiBol1.JH378287 1312907 209 - 2905041 TGCGCTGACTTGTGTCGAGTAGCACT--GGGGCGCCAGCCTGGCCGAAGGCCACCCCAACTG-----------GTAtttgttttt----------agtttttgagacaaggtgtca--ctgtcacccaggctggggtggactgacggcatcacggctcactgcagcctcaaagtcct-gggctagagccatcctcccacctcagcctcccccgtggctagagctgtatgcctgca i saiBol1.JH378287 C 0 I 1 s cebCap1.NW_016107695v1 1275471 215 - 2164891 TACTCTGACTTGTGTCAAGTAGCACT--GGGGGGCCAGCCTGGCTGAAGACCACCCCAACAGCTAG-------ttttttgttttt----------agtttttgagacaaggtgtcactctgtcatccaggctgggttggagtgatgccatcatggctcactgcggcctcaaagtcct-gggctagagccatcctcccacctcagcctcctcagtggctggagccatatgcctgca i cebCap1.NW_016107695v1 C 0 I 22 s aotNan1.NW_018494782v1 1523793 210 - 1813869 TACTC-----TGTGTCAAGTAGCACT--AGGGGGCCAGCCTGGCCGAAGACCACCCCAACAGCTGG-------ttttttgttttt----------agtttttgagacaaggtgtcactctgtcacccaggctggggtggagtgacgccatcacagctcactgcagcctcaaagtcct-gggctagagccattctcccacctcagccccctcagtggctggagccacgtgcctgca i aotNan1.NW_018494782v1 C 0 I 21 e otoGar3.GL873575 10967603 1070 - 12073884 I e dasNov3.JH569188 592871 1337 + 760995 I e colAng1.NW_012114488v1 15629144 1919 - 23502949 I e canFam3.chr1 56193179 0 + 122678785 C a score=75901.000000 s hg38.chr6_KB021644v2_alt 126014 30 + 185823 tgtgcctgcaccacgcctggc-ttagttgt-----------------t s panTro5.chr6 173582264 27 + 175400573 tgtgcctgcaccacgcctggc-taa---gt-----------------t i panTro5.chr6 C 0 C 0 s panPan2.chr6 171815913 27 + 173848474 tgtgcctgcaccacgcctggc-taa---gt-----------------t i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11498731 26 - 12463322 tgtgcctgcaccacgcctggc-taa---gt------------------ i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156327628 44 + 157873769 tgtgcctgcaccacacctggg-taa---gttttttttttttttttttt i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170354299 37 + 172585720 tgtgcccgcaccacacctggcttaa---gt--------ttttttgttg i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169099573 37 - 170955103 tgtgcccgcaccacacctggcttaa---gt--------ttttttgttg i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8386158 37 + 10161646 tgtgcccgcaccacacctggcttaa---gt--------ttttttgttg i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1417863 37 + 3144229 tgtgcccgcaccatgtctggcttaa---gt--------ttttttgttg i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96704184 37 + 98384682 tgtgcccgcaccacacctggcttaa---gt--------ttttttgttg i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8240002 37 - 10857215 tgtgcccgcaccacacctggcttaa---gt--------ttttttgttg i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169909988 21 + 171630274 cacacctacaccagactaaga--------------------------- i calJac3.chr4 I 1 C 0 s saiBol1.JH378287 1313117 21 - 2905041 cacacctgcaccagactaaga--------------------------- i saiBol1.JH378287 I 1 C 0 e otoGar3.GL873575 10967603 1070 - 12073884 I e aotNan1.NW_018494782v1 1524003 21 - 1813869 I e cebCap1.NW_016107695v1 1275686 22 - 2164891 I e dasNov3.JH569188 592871 1337 + 760995 I e colAng1.NW_012114488v1 15629144 1919 - 23502949 I e canFam3.chr1 56193179 0 + 122678785 C a score=1524706.000000 s hg38.chr6_KB021644v2_alt 126044 199 + 185823 --tttttttttttttttttgtaga------gatggggtcttgccatgttgcctaggctggtcttaaactcctgggctcaagcaatcctt---cctcggcctcccacagtgctgggattttaggcatgagcccccgcacAGCTCTGTGGGAATGCAAGGCCTTATCCCAGGAACACATGCTGCT-GGGGGGATAACCAGGAACATTGGCCCC s panTro5.chr6 173582291 199 + 175400573 --tttttttttttttttttgtaga------gttggggtcttgccatgttgcctaggctggtcttaaactcctgggctcaagcaatcctt---cctcggcctcccacagtgctgggattttaggcatgagcccccgcacAGCTCTGTGGGAATGCAAGGCCTTATCCCAGGAACACATGCTGCT-GGGGGGATAACCAGGAACATTGGCCCC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171815940 199 + 173848474 --tagttttttttttttttgtaga------gatggggtcttgccatgttgcctaggctggtcttaaactcctgggctcaagcaatcctt---cctcggcctcccacagtgctgggattttaggcatgagcccccgcacAGCTCTGTGGGAATGCAAAGCCTTATCCCAGGAACACATGCTGCT-GGGGGGATAACCAGGAACATTGGCCCC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11498757 196 - 12463322 -----tttgtgttttttttgtaga------gatggggtcttgccatgttgcctaggctggtcttaaactcctgggctcaagcaatcctt---ccttggcctcccacagtgctgggattttaggcatgagcccccgcacAGCTCTGTGGGAATGCAAGGCCTTATCCCAGGAACACATGCTGCT-GGGGGGATAACCAGGAACACTGGCTTC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156327672 200 + 157873769 --tttttttttttttttttgtaga------gatggggtcttgccatgttgcctaggctggacttaaactcctgggctcaagcaatcctt---cctcagcctcccaaagtgctgggattctaggcacgagcccccgcacAGCTCTGTGGGAATGCAAGGCCTCATCCCAGGAACACATGCTGCCGGGGGGGATAGCCAGGAACATTGGCCCC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170354336 202 + 172585720 --ttgttgtttttgtttttgtagagatggggatggggtcctgccatgttgcctaggctagtcttaaactcctgggctcaagcaatcctt---cctcagcctcccaaagtgctgggattctaggcatgagcccccacgcAGCTCTGTGGGAAGTCAAGGCCTCATCCCAGGAACACATGCC----GGGGGGATAACCAGGGACACTGGCCCT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169099610 202 - 170955103 --ttgttgtttttgtttttgtagagatggggatggggtcctgccatgttgcctaggctagtcttaaactcctgggctcaagcaatcctt---cctcagcctcccaaagtgctgggattctaggcatgagcccccacgcAGCTCTGTGGGAAGTCAAGGCCTCATCCCAGGAACACATGCC----GGGGGGATAACCAGGGACACTGGCCCT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8386195 202 + 10161646 --ttgttgtttttgtttttgtagagatggggatggggtcctgccatgttgcctaggctagtcttaaactcctgggctcaagcaatcctt---cctcagcctcccaaagtgctgggattctaggcatgagcccccacgcAGCTCTGTGGGAAGTCAAGGCCTCATCCCAGGAACACATGCC----GGGGGGATAACCAGGGACACTGGCCCT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1417900 202 + 3144229 --ttgttgtttttgtttttgtagagatggggatggggtcctgccatgttgcctcggctagtcttaaactcctgggctgaagcaatcctt---cctcagcctcccaaagtgctgggattctaggcatgagcccccacgcAGCTCTGTGGGAATTCAAGGCCTCATCCCAGGAACACATGCC----GGGGGGATAACCGGGGACACTGGCCCT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96704221 202 + 98384682 --ttgttgtttttgtttttatagagatggggatggggtcctgccatgttgcctaggctagtcttaaactcctgggctcaagcaatcctt---cctcagcctcccaaagtgctgggattctaggcatgagcccccacgcAGCTCTGTGGGAAGTCAAGGCCTCATCCCAGGAACACATGCC----GGGGGGATAACCAGGGACACTGGCCCC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8240039 202 - 10857215 --ttgttgtttttgtttttgtagagatggggatggggtcctgccatgttgcctcggctagtcttaaactcctgggctcaagcaatcctt---cctcagcctcccaaagtgctgggattctaggcatgagcccccacgcAGCTCTGTGGGAATTCAAGGCCTCATCCCAGGAACACATGCT----GGGGGGATAACCAGGGACACTGGCCCC i manLeu1.NW_012106474v1 C 0 I 26 s calJac3.chr4 169910009 202 + 171630274 -tttgtttgtttatttttggtaga------gatggggctttgctgtgttgccgaggctggtcttaaactcctgggctcacgcaatccttcttcctcagcctcccaaagtgctgggattacgggcatgag-ccCCATGCAACTCTGTAGAATTGCAAGGCCTCATCCCAGGAGCATGTGCTGCT-GGGACGATAACCGGGGACACTGGCCAC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1313138 200 - 2905041 -tttgtttattt-tttttggtaga------gatggggcttcactatgttgcctaggctggtcttaaactcctgggctcaagcgatcctt-tccctcagcttcccaaagtgctgggattacaggcatgagcccccAGGCAGCTCCGTGGGAATGCTAGGCCTCTTCCAAGGA-CATGTGCTGCC-GGGACGGTAACCAGGGACACTGGCCTC i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1275708 200 - 2164891 -tttgtttatt--tttttggtaga------gatgtggctttgctatgttgcctaggctggtcttaaacgcctgcgctcaagtgatcctt-ttcctcagcctcccaaagtgctgggattacaggcatgagcccccAGGCAGCTCTGTGGGAATGCAAGGCCTCATCCCGGGAGCATGTGCTGCC-GGAATGATAACCAGGAACACTGGCCCC i cebCap1.NW_016107695v1 I 22 C 0 s aotNan1.NW_018494782v1 1524024 201 - 1813869 atttgtttatt--tttttggtaga------gatggggctttgctatgttgcctaggctggtcttaaactcctgggctcaagcgatcctt-ttcctcagcctcccaaagtgctgggattacaggcatgagccaccAAGCAGCTCTGTGGGAATGCAAGGCCTCATCCCAGGAGCATGTGCTGCC-GGGACTATAACCAGGGACACTGGCCCC i aotNan1.NW_018494782v1 I 21 C 0 e otoGar3.GL873575 10967603 1070 - 12073884 I e dasNov3.JH569188 592871 1337 + 760995 I e colAng1.NW_012114488v1 15629144 1919 - 23502949 I e canFam3.chr1 56193179 0 + 122678785 C a score=146557.000000 s hg38.chr6_KB021644v2_alt 126243 19 + 185823 AGTTTTCCACCTGGATCTG s panTro5.chr6 173582490 19 + 175400573 GGTTTTCCACCTGGATCTG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171816139 19 + 173848474 GGTTTTCCACCTGGATCTG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11498953 19 - 12463322 GGTTTTCCACCTGGATCTG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156327872 19 + 157873769 GGTTTTCCACCTGGATCTG i nomLeu3.chr3 C 0 I 88 s rheMac8.chr4 170354538 19 + 172585720 GGTTTTCCACCTGGATCTG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169099812 19 - 170955103 GGTTTTCCACCTGGATCTG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8386397 19 + 10161646 GGTTTTCCACCTGGATCTG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1418102 19 + 3144229 GGTTTTCCACCTGGATCTG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96704423 19 + 98384682 GGTTTTCCACCTGGATCTG i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169910211 19 + 171630274 AGTTTTCCACCTGGATCTG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1313338 19 - 2905041 AGGTCTCCACCTGGATCCG i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1275908 19 - 2164891 AGTTTTCTACCTGGATATG i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1524225 19 - 1813869 AGTGTTCCACCTGGATCTG i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10967603 1070 - 12073884 I e dasNov3.JH569188 592871 1337 + 760995 I e colAng1.NW_012114488v1 15629144 1919 - 23502949 I e canFam3.chr1 56193179 0 + 122678785 C e manLeu1.NW_012106474v1 8240241 26 - 10857215 I a score=35820.000000 s hg38.chr6_KB021644v2_alt 126262 6 + 185823 GGAAAG s panTro5.chr6 173582509 6 + 175400573 GGAAAG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171816158 6 + 173848474 GGAAAG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11498972 6 - 12463322 GGAAAG i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170354557 6 + 172585720 GGAAGG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169099831 6 - 170955103 GGAAGG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8386416 6 + 10161646 GGAAGG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1418121 6 + 3144229 GGAAAG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96704442 6 + 98384682 GGAAAG i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169910230 6 + 171630274 GGAATG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1313357 6 - 2905041 GGAATG i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1275927 6 - 2164891 GGAAAG i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1524244 6 - 1813869 GGAATG i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10967603 1070 - 12073884 I e dasNov3.JH569188 592871 1337 + 760995 I e colAng1.NW_012114488v1 15629144 1919 - 23502949 I e canFam3.chr1 56193179 0 + 122678785 C e nomLeu3.chr3 156327891 88 + 157873769 I e manLeu1.NW_012106474v1 8240241 26 - 10857215 I a score=8281.000000 s hg38.chr6_KB021644v2_alt 126268 1 + 185823 A s panTro5.chr6 173582515 1 + 175400573 A i panTro5.chr6 C 0 C 0 s panPan2.chr6 171816164 1 + 173848474 A i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11498978 1 - 12463322 A i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170354563 1 + 172585720 A i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169099837 1 - 170955103 A i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8386422 1 + 10161646 A i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1418127 1 + 3144229 A i cerAty1.NW_012002071v1 C 0 I 79 s chlSab2.chr13 96704448 1 + 98384682 A i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8240267 1 - 10857215 A i manLeu1.NW_012106474v1 I 26 C 0 s calJac3.chr4 169910236 1 + 171630274 A i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1313363 1 - 2905041 A i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1275933 1 - 2164891 A i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1524250 1 - 1813869 A i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10967603 1070 - 12073884 I e dasNov3.JH569188 592871 1337 + 760995 I e colAng1.NW_012114488v1 15629144 1919 - 23502949 I e canFam3.chr1 56193179 0 + 122678785 C e nomLeu3.chr3 156327891 88 + 157873769 I a score=33966.000000 s hg38.chr6_KB021644v2_alt 126269 5 + 185823 GACAT s panTro5.chr6 173582516 5 + 175400573 GACAT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171816165 5 + 173848474 GACAT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11498979 5 - 12463322 GACAT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156327979 5 + 157873769 GGCAT i nomLeu3.chr3 I 88 C 0 s rheMac8.chr4 170354564 5 + 172585720 GACAT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169099838 5 - 170955103 GACAT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8386423 5 + 10161646 GACAT i macNem1.NW_012011000v1 C 0 C 0 s chlSab2.chr13 96704449 5 + 98384682 GACAT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8240268 5 - 10857215 GACAT i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169910237 5 + 171630274 GACAC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1313364 5 - 2905041 GACAC i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1275934 5 - 2164891 GACCC i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1524251 5 - 1813869 GACAC i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10967603 1070 - 12073884 I e dasNov3.JH569188 592871 1337 + 760995 I e colAng1.NW_012114488v1 15629144 1919 - 23502949 I e canFam3.chr1 56193179 0 + 122678785 C e cerAty1.NW_012002071v1 1418128 79 + 3144229 I a score=112459.000000 s hg38.chr6_KB021644v2_alt 126274 17 + 185823 CACACAGCTCAGTGTCC s panTro5.chr6 173582521 17 + 175400573 CACACAGCTCAGCGTCC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171816170 17 + 173848474 CACACAGCTCAGCGTCC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11498984 17 - 12463322 CACACAGCTCAGCGTCC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156327984 17 + 157873769 CACACAGCTCAACGTCC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170354569 17 + 172585720 CACACAGCTCAGCGTCC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169099843 17 - 170955103 CACACAGCTCAGCGTCC i macFas5.chr4 C 0 T 74 s macNem1.NW_012011000v1 8386428 17 + 10161646 CACACAGCTCAGCGTCC i macNem1.NW_012011000v1 C 0 T 48 s chlSab2.chr13 96704454 17 + 98384682 CACACAGCTCAGCGTCC i chlSab2.chr13 C 0 T 48 s manLeu1.NW_012106474v1 8240273 17 - 10857215 CACACAGCTCAGCGTCC i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169910242 17 + 171630274 CACACAGCTTAGCCTCC i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1275939 17 - 2164891 CATACAACTCAGCCTCC i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1524256 17 - 1813869 CACACAACTCAGCCTCC i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10967603 1070 - 12073884 I e saiBol1.JH378287 1313369 0 - 2905041 C e dasNov3.JH569188 592871 1337 + 760995 I e colAng1.NW_012114488v1 15629144 1919 - 23502949 I e canFam3.chr1 56193179 0 + 122678785 C e cerAty1.NW_012002071v1 1418128 79 + 3144229 I a score=17190.000000 s hg38.chr6_KB021644v2_alt 126291 4 + 185823 AGGA s panTro5.chr6 173582538 4 + 175400573 AGGA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171816187 4 + 173848474 AGGA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11499001 4 - 12463322 AGGA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156328001 4 + 157873769 AGGA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170354586 4 + 172585720 AGGA i rheMac8.chr4 C 0 I 1 s manLeu1.NW_012106474v1 8240290 4 - 10857215 AGGA i manLeu1.NW_012106474v1 C 0 I 1 s calJac3.chr4 169910259 4 + 171630274 AGGA i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1275956 4 - 2164891 AGGA i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1524273 4 - 1813869 AGGA i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10967603 1070 - 12073884 I e saiBol1.JH378287 1313369 0 - 2905041 C e dasNov3.JH569188 592871 1337 + 760995 I e colAng1.NW_012114488v1 15629144 1919 - 23502949 I e canFam3.chr1 56193179 0 + 122678785 C e chlSab2.chr13 96704471 48 + 98384682 T e cerAty1.NW_012002071v1 1418128 79 + 3144229 I e macNem1.NW_012011000v1 8386445 48 + 10161646 T e macFas5.chr4 169099860 74 - 170955103 T a score=-8535.000000 s hg38.chr6_KB021644v2_alt 126295 2 + 185823 -GT s panTro5.chr6 173582542 2 + 175400573 -GT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171816191 1 + 173848474 -G- i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11499005 2 - 12463322 -GG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156328005 2 + 157873769 -GG i nomLeu3.chr3 C 0 T 160 s rheMac8.chr4 170354591 1 + 172585720 -G- i rheMac8.chr4 I 1 C 0 s macFas5.chr4 169099786 1 - 170955103 -G- i macFas5.chr4 T 74 C 0 s manLeu1.NW_012106474v1 8240295 1 - 10857215 -G- i manLeu1.NW_012106474v1 I 1 C 0 s calJac3.chr4 169910263 2 + 171630274 GG- i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1275960 2 - 2164891 GA- i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1524277 2 - 1813869 GG- i aotNan1.NW_018494782v1 C 0 I 1 e otoGar3.GL873575 10967603 1070 - 12073884 I e saiBol1.JH378287 1313369 0 - 2905041 C e dasNov3.JH569188 592871 1337 + 760995 I e colAng1.NW_012114488v1 15629144 1919 - 23502949 I e canFam3.chr1 56193179 0 + 122678785 C e chlSab2.chr13 96704471 48 + 98384682 T e cerAty1.NW_012002071v1 1418128 79 + 3144229 I e macNem1.NW_012011000v1 8386445 48 + 10161646 T a score=67427.000000 s hg38.chr6_KB021644v2_alt 126297 22 + 185823 GGGGGCAGCCCAAGACTCAGGC s panTro5.chr6 173582544 22 + 175400573 GGGGGCAGCCCAAGACTCAGGC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171816192 22 + 173848474 GCGGGCAGCCCAAGACTCAGGC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11499007 22 - 12463322 CGGGGCAGCCCAAAACTTAGGC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156327847 22 + 157873769 GGGGATAGCCAGGAACATTGGC i nomLeu3.chr3 T 160 C 0 s rheMac8.chr4 170354592 22 + 172585720 CGGGGCAGCCCGAGACTCAGGC i rheMac8.chr4 C 0 T 76 s macFas5.chr4 169099787 22 - 170955103 GGGGATAACCAGGGACACTGGC i macFas5.chr4 C 0 I 2 s manLeu1.NW_012106474v1 8240296 22 - 10857215 CGGGGCAGCCCGAGACTCAGGC i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169910265 22 + 171630274 GGAGGCAGCGAGGGACTCAGGC i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1275962 22 - 2164891 GGAGGCAGGGAAGGACTCAGGC i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1524280 22 - 1813869 GGAGGCAGCGAAGGACTCAGGC i aotNan1.NW_018494782v1 I 1 C 0 e otoGar3.GL873575 10967603 1070 - 12073884 I e saiBol1.JH378287 1313369 0 - 2905041 C e dasNov3.JH569188 592871 1337 + 760995 I e colAng1.NW_012114488v1 15629144 1919 - 23502949 I e canFam3.chr1 56193179 0 + 122678785 C e chlSab2.chr13 96704471 48 + 98384682 T e cerAty1.NW_012002071v1 1418128 79 + 3144229 I e macNem1.NW_012011000v1 8386445 48 + 10161646 T a score=4093.000000 s hg38.chr6_KB021644v2_alt 126319 3 + 185823 TCA s panTro5.chr6 173582566 3 + 175400573 TCA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171816214 3 + 173848474 TCA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11499029 3 - 12463322 TCA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156327869 3 + 157873769 CCC i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169099811 1 - 170955103 T-- i macFas5.chr4 I 2 C 0 s manLeu1.NW_012106474v1 8240318 3 - 10857215 TCA i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169910287 3 + 171630274 TCA i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1275984 3 - 2164891 TCA i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1524302 3 - 1813869 TCA i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10967603 1070 - 12073884 I e saiBol1.JH378287 1313369 0 - 2905041 C e dasNov3.JH569188 592871 1337 + 760995 I e colAng1.NW_012114488v1 15629144 1919 - 23502949 I e canFam3.chr1 56193179 0 + 122678785 C e chlSab2.chr13 96704471 48 + 98384682 T e cerAty1.NW_012002071v1 1418128 79 + 3144229 I e macNem1.NW_012011000v1 8386445 48 + 10161646 T e rheMac8.chr4 170354614 76 + 172585720 T a score=15600.000000 s hg38.chr6_KB021644v2_alt 126322 2 + 185823 GG s panTro5.chr6 173582569 2 + 175400573 GG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171816217 2 + 173848474 GG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11499032 2 - 12463322 GG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156327872 2 + 157873769 GG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170354538 2 + 172585720 GG i rheMac8.chr4 T 76 C 0 s macFas5.chr4 169099812 2 - 170955103 GG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8386397 2 + 10161646 GG i macNem1.NW_012011000v1 T 48 C 0 s chlSab2.chr13 96704423 2 + 98384682 GG i chlSab2.chr13 T 48 C 0 s manLeu1.NW_012106474v1 8240321 2 - 10857215 GG i manLeu1.NW_012106474v1 C 0 I 106 s calJac3.chr4 169910290 2 + 171630274 GG i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1275987 2 - 2164891 GG i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1524305 2 - 1813869 GG i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10967603 1070 - 12073884 I e saiBol1.JH378287 1313369 0 - 2905041 C e dasNov3.JH569188 592871 1337 + 760995 I e colAng1.NW_012114488v1 15629144 1919 - 23502949 I e canFam3.chr1 56193179 0 + 122678785 C e cerAty1.NW_012002071v1 1418128 79 + 3144229 I a score=146229.000000 s hg38.chr6_KB021644v2_alt 126324 23 + 185823 TTTTCCACCTGGATCTTGGAAAG s panTro5.chr6 173582571 23 + 175400573 TTTTCCACCTGGATCTGGGAAAG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171816219 23 + 173848474 TTTTCCACCTGGACCTTGGAAAG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11499034 23 - 12463322 TTTTCCACCTGGATCTGGGAATG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156327874 23 + 157873769 TTTTCCACCTGGATCTGGGAATG i nomLeu3.chr3 C 0 I 1 s rheMac8.chr4 170354540 23 + 172585720 TTTTCCACCTGGATCTGGGAAGG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169099814 23 - 170955103 TTTTCCACCTGGATCTGGGAAGG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8386399 23 + 10161646 TTTTCCACCTGGATCTGGGAAGG i macNem1.NW_012011000v1 C 0 C 0 s chlSab2.chr13 96704425 23 + 98384682 TTTTCCACCTGGATCTGGGAAAG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8240429 23 - 10857215 TTTTCCACCTGGATCTGGGAATG i manLeu1.NW_012106474v1 I 106 I 1 s calJac3.chr4 169910292 23 + 171630274 CTCTCCACCTGGATCTGGGAATG i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1275989 23 - 2164891 TTCTCCACCCGGATCTGGGAATC i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1524307 23 - 1813869 TTTTCCACCTGGATCTGGGAATG i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10967603 1070 - 12073884 I e saiBol1.JH378287 1313369 0 - 2905041 C e dasNov3.JH569188 592871 1337 + 760995 I e colAng1.NW_012114488v1 15629144 1919 - 23502949 I e canFam3.chr1 56193179 0 + 122678785 C e cerAty1.NW_012002071v1 1418128 79 + 3144229 I a score=31128.000000 s hg38.chr6_KB021644v2_alt 126347 5 + 185823 AGAC-A s panTro5.chr6 173582594 5 + 175400573 AGAC-A i panTro5.chr6 C 0 C 0 s panPan2.chr6 171816242 5 + 173848474 AGAC-A i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11499057 6 - 12463322 AAGCTA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156327898 5 + 157873769 AGGC-A i nomLeu3.chr3 I 1 C 0 s rheMac8.chr4 170354563 5 + 172585720 AGAC-A i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169099837 5 - 170955103 AGAC-A i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8386422 5 + 10161646 AGAC-A i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1418207 5 + 3144229 AGAC-A i cerAty1.NW_012002071v1 I 79 C 0 s chlSab2.chr13 96704448 5 + 98384682 AGAC-A i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8240453 5 - 10857215 AGAC-A i manLeu1.NW_012106474v1 I 1 C 0 s calJac3.chr4 169910315 5 + 171630274 AGAC-A i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1276012 5 - 2164891 AGAT-A i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1524330 5 - 1813869 AGAC-A i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10967603 1070 - 12073884 I e saiBol1.JH378287 1313369 0 - 2905041 C e dasNov3.JH569188 592871 1337 + 760995 I e colAng1.NW_012114488v1 15629144 1919 - 23502949 I e canFam3.chr1 56193179 0 + 122678785 C a score=12223.000000 s hg38.chr6_KB021644v2_alt 126352 2 + 185823 TC s panTro5.chr6 173582599 2 + 175400573 TC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171816247 2 + 173848474 TC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11499063 2 - 12463322 TC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156327903 2 + 157873769 TC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170354568 2 + 172585720 TC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169099842 2 - 170955103 TC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8386427 2 + 10161646 TC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1418212 2 + 3144229 TC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96704453 2 + 98384682 TC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8240458 2 - 10857215 TC i manLeu1.NW_012106474v1 C 0 C 0 s cebCap1.NW_016107695v1 1276017 2 - 2164891 CC i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1524335 2 - 1813869 CC i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10967603 1070 - 12073884 I e saiBol1.JH378287 1313369 0 - 2905041 C e calJac3.chr4 169910320 0 + 171630274 C e dasNov3.JH569188 592871 1337 + 760995 I e colAng1.NW_012114488v1 15629144 1919 - 23502949 I e canFam3.chr1 56193179 0 + 122678785 C a score=269142.000000 s hg38.chr6_KB021644v2_alt 126354 44 + 185823 ACACAGCTCAGCCTCTAGGAGGC--------------------------------------------------------------------------------GGGGCAGCCCGAGACTCAGGC s panTro5.chr6 173582601 44 + 175400573 ACACAGCTCAGCGTCCAGGAGTG--------------------------------------------------------------------------------GGGGCAGCCCAAGACTCAGGC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171816249 124 + 173848474 ACACAGCTCAGCGTCCAGGAGGCAGGGCAGCCCAAAACTTAGGCTCAGGTTTTCCACCTGGATCTGGGAATGAAGACGTCACACAGCTCAGCTTTCAGGAGGTGGGGCAGCCTGAGACTCAGGC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11499065 44 - 12463322 ACACAGCTCAGCTTCTAGGAGGC--------------------------------------------------------------------------------GGGGCAGCCCAAGACTCAGGC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156327905 44 + 157873769 ACACAGCTCAGCTTCTAGGAGGC--------------------------------------------------------------------------------GGGGCAGCCCGAGACTCAGGC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170354570 44 + 172585720 ACACAGCTCAGCGTCCAGGAGGC--------------------------------------------------------------------------------GGGGCAGCCCGAGACTCAGGC i rheMac8.chr4 C 0 T 76 s macFas5.chr4 169099844 44 - 170955103 ACACAGCTCAGCGTCCAGGAGGC--------------------------------------------------------------------------------GGGGCAGCCCGAGACTCAGGC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8386429 44 + 10161646 ACACAGCTCAGCGTCCAGGAGGC--------------------------------------------------------------------------------GGGGCAGCCCGAGACTCAGGC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1418214 44 + 3144229 ACACAGCTCAGCTTCTAGGAGGC--------------------------------------------------------------------------------GGGGCAGCCCGAGACTCAGGC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96704455 44 + 98384682 ACACAGCTCAGCGTCCAGGAGGC--------------------------------------------------------------------------------GGTGCAGCCCGAGACTCAGGC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8240460 44 - 10857215 ACACAGCTCAGCTTCTAGGagtg--------------------------------------------------------------------------------ggggcagcctgggacgtgggc i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169910320 44 + 171630274 ACACAACTCAGCTTCCAGGAGGG--------------------------------------------------------------------------------GAGGCTGTGAAGGACTCAGGC i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1276019 44 - 2164891 ACACAGCTCAGCCTCCAGGAGGG--------------------------------------------------------------------------------GAGGCAGTGAAGGACTCAGGC i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1524337 44 - 1813869 ACAGAGCTCAGCTTCCAGGAGGG--------------------------------------------------------------------------------GAGGCAGCAAGGGACTCAGGC i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10967603 1070 - 12073884 I e saiBol1.JH378287 1313369 0 - 2905041 C e dasNov3.JH569188 592871 1337 + 760995 I e colAng1.NW_012114488v1 15629144 1919 - 23502949 I e canFam3.chr1 56193179 0 + 122678785 C a score=20424.000000 s hg38.chr6_KB021644v2_alt 126398 3 + 185823 TCA s panTro5.chr6 173582645 3 + 175400573 TCA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171816373 3 + 173848474 TCA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11499109 3 - 12463322 TTA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156327949 3 + 157873769 TCA i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169099888 3 - 170955103 TCA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8386473 3 + 10161646 TCA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1418258 3 + 3144229 TCA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96704499 3 + 98384682 TCA i chlSab2.chr13 C 0 T 79 s manLeu1.NW_012106474v1 8240504 3 - 10857215 tca i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169910364 3 + 171630274 TCA i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1276063 3 - 2164891 TCA i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1524381 3 - 1813869 TCA i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10967603 1070 - 12073884 I e saiBol1.JH378287 1313369 0 - 2905041 C e dasNov3.JH569188 592871 1337 + 760995 I e colAng1.NW_012114488v1 15629144 1919 - 23502949 I e canFam3.chr1 56193179 0 + 122678785 C e rheMac8.chr4 170354614 76 + 172585720 T a score=46081.000000 s hg38.chr6_KB021644v2_alt 126401 7 + 185823 GGTTTTC s panTro5.chr6 173582648 7 + 175400573 GGTTTTC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171816376 7 + 173848474 GGTTTTC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11499112 7 - 12463322 GGTTTTC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156327952 7 + 157873769 GGTTTTC i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169099891 7 - 170955103 GGTTTTC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8386476 7 + 10161646 GGTTTTC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1418261 7 + 3144229 GGTTTTC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96704423 7 + 98384682 GGTTTTC i chlSab2.chr13 T 79 C 0 s manLeu1.NW_012106474v1 8240507 7 - 10857215 gattttc i manLeu1.NW_012106474v1 C 0 T 80 s calJac3.chr4 169910367 7 + 171630274 GGCTTTC i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1276066 7 - 2164891 GGTTCTC i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1524384 7 - 1813869 GGTTCTC i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10967603 1070 - 12073884 I e saiBol1.JH378287 1313369 0 - 2905041 C e dasNov3.JH569188 592871 1337 + 760995 I e colAng1.NW_012114488v1 15629144 1919 - 23502949 I e canFam3.chr1 56193179 0 + 122678785 C e rheMac8.chr4 170354614 76 + 172585720 T a score=22698.000000 s hg38.chr6_KB021644v2_alt 126408 3 + 185823 CAC s panTro5.chr6 173582655 3 + 175400573 CAC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171816383 3 + 173848474 CAC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11499119 3 - 12463322 CAC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156327959 3 + 157873769 CAC i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169099898 3 - 170955103 CAC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8386483 3 + 10161646 CAC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1418268 3 + 3144229 CAC i cerAty1.NW_012002071v1 C 0 T 169 s chlSab2.chr13 96704430 3 + 98384682 CAC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8240434 3 - 10857215 CAC i manLeu1.NW_012106474v1 T 80 C 0 s calJac3.chr4 169910374 3 + 171630274 CAC i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1276073 3 - 2164891 CAC i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1524391 3 - 1813869 CAC i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10967603 1070 - 12073884 I e saiBol1.JH378287 1313369 0 - 2905041 C e dasNov3.JH569188 592871 1337 + 760995 I e colAng1.NW_012114488v1 15629144 1919 - 23502949 I e canFam3.chr1 56193179 0 + 122678785 C e rheMac8.chr4 170354614 76 + 172585720 T a score=77079.000000 s hg38.chr6_KB021644v2_alt 126411 15 + 185823 CTGGACCTTGGAAAG s panTro5.chr6 173582658 15 + 175400573 CTGGATCTTGGAAAG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171816386 15 + 173848474 CTGGATCTCGGAAAG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11499122 15 - 12463322 CTGGATCTGGGAAAG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156327962 15 + 157873769 CTGGATCTGGGAATG i nomLeu3.chr3 C 0 I 1 s macFas5.chr4 169099901 15 - 170955103 CTGGATCTGGGAATG i macFas5.chr4 C 0 T 130 s macNem1.NW_012011000v1 8386486 15 + 10161646 CTGGATCTGGGAATG i macNem1.NW_012011000v1 C 0 T 104 s chlSab2.chr13 96704433 15 + 98384682 CTGGATCTGGGAAAG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8240437 15 - 10857215 CTGGATCTGGGAATG i manLeu1.NW_012106474v1 C 0 I 1 s calJac3.chr4 169910377 15 + 171630274 CTGGATCTGGGAATG i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1276076 15 - 2164891 CCGGATCTGGAAATG i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1524394 15 - 1813869 CTGGATCTGGGAATG i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10967603 1070 - 12073884 I e saiBol1.JH378287 1313369 0 - 2905041 C e dasNov3.JH569188 592871 1337 + 760995 I e colAng1.NW_012114488v1 15629144 1919 - 23502949 I e canFam3.chr1 56193179 0 + 122678785 C e cerAty1.NW_012002071v1 1418271 169 + 3144229 T e rheMac8.chr4 170354614 76 + 172585720 T a score=83627.000000 s hg38.chr6_KB021644v2_alt 126426 27 + 185823 AGACA-TCACACAGCTCAGCGTCCAGGA s panTro5.chr6 173582673 27 + 175400573 AGACA-TCACACAGCTCAGCTTCTAGGA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171816401 27 + 173848474 AGACA-TCACACAGCTCAGCGTCCAGGA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11499137 27 - 12463322 AGACA-TCACACAGCTCAGCATCCAGGA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156327978 27 + 157873769 AGGCA-TCACACAGCTCAACGTCCAGGA i nomLeu3.chr3 I 1 C 0 s chlSab2.chr13 96704448 27 + 98384682 AGACA-TCACACAGCTCAGCGTCCAGGA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8240453 27 - 10857215 AGACA-TCACACAGCTCAGCTTCTAGGa i manLeu1.NW_012106474v1 I 1 C 0 s calJac3.chr4 169910392 25 + 171630274 AGACA---ACACAACTCAGCTTCCAGGA i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1276091 27 - 2164891 AGACA-CCACACAGCTCAGCTTCTAGGA i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1524409 28 - 1813869 AGACAACAACACACGTCAGCTTCCGGTG i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10967603 1070 - 12073884 I e saiBol1.JH378287 1313369 0 - 2905041 C e dasNov3.JH569188 592871 1337 + 760995 I e colAng1.NW_012114488v1 15629144 1919 - 23502949 I e canFam3.chr1 56193179 0 + 122678785 C e cerAty1.NW_012002071v1 1418271 169 + 3144229 T e macNem1.NW_012011000v1 8386501 104 + 10161646 T e rheMac8.chr4 170354614 76 + 172585720 T e macFas5.chr4 169099916 130 - 170955103 T a score=5500.000000 s hg38.chr6_KB021644v2_alt 126453 1 + 185823 G s panTro5.chr6 173582700 1 + 175400573 G i panTro5.chr6 C 0 C 0 s panPan2.chr6 171816428 1 + 173848474 G i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11499164 1 - 12463322 G i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156328005 1 + 157873769 G i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169099786 1 - 170955103 G i macFas5.chr4 T 130 I 1 s chlSab2.chr13 96704475 1 + 98384682 G i chlSab2.chr13 C 0 I 2 s manLeu1.NW_012106474v1 8240480 1 - 10857215 g i manLeu1.NW_012106474v1 C 0 T 108 s calJac3.chr4 169910417 1 + 171630274 G i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1276118 1 - 2164891 G i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1524437 1 - 1813869 G i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10967603 1070 - 12073884 I e saiBol1.JH378287 1313369 0 - 2905041 C e dasNov3.JH569188 592871 1337 + 760995 I e colAng1.NW_012114488v1 15629144 1919 - 23502949 I e canFam3.chr1 56193179 0 + 122678785 C e cerAty1.NW_012002071v1 1418271 169 + 3144229 T e macNem1.NW_012011000v1 8386501 104 + 10161646 T e rheMac8.chr4 170354614 76 + 172585720 T a score=3600.000000 s hg38.chr6_KB021644v2_alt 126454 1 + 185823 G s panTro5.chr6 173582701 1 + 175400573 G i panTro5.chr6 C 0 C 0 s panPan2.chr6 171816429 1 + 173848474 G i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11499165 1 - 12463322 G i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156328006 1 + 157873769 G i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169099788 1 - 170955103 G i macFas5.chr4 I 1 C 0 s chlSab2.chr13 96704478 1 + 98384682 G i chlSab2.chr13 I 2 C 0 s calJac3.chr4 169910418 1 + 171630274 G i calJac3.chr4 C 0 I 2 s cebCap1.NW_016107695v1 1276119 1 - 2164891 G i cebCap1.NW_016107695v1 C 0 T 211 e otoGar3.GL873575 10967603 1070 - 12073884 I e saiBol1.JH378287 1313369 0 - 2905041 C e aotNan1.NW_018494782v1 1524438 0 - 1813869 C e dasNov3.JH569188 592871 1337 + 760995 I e colAng1.NW_012114488v1 15629144 1919 - 23502949 I e canFam3.chr1 56193179 0 + 122678785 C e cerAty1.NW_012002071v1 1418271 169 + 3144229 T e manLeu1.NW_012106474v1 8240481 108 - 10857215 T e macNem1.NW_012011000v1 8386501 104 + 10161646 T e rheMac8.chr4 170354614 76 + 172585720 T a score=1000.000000 s hg38.chr6_KB021644v2_alt 126455 1 + 185823 C s panTro5.chr6 173582702 1 + 175400573 C i panTro5.chr6 C 0 I 1 s panPan2.chr6 171816430 1 + 173848474 C i panPan2.chr6 C 0 I 1 s gorGor5.CYUI01015032v1 11499166 1 - 12463322 C i gorGor5.CYUI01015032v1 C 0 I 1 s nomLeu3.chr3 156328007 1 + 157873769 C i nomLeu3.chr3 C 0 I 81 e otoGar3.GL873575 10967603 1070 - 12073884 I e saiBol1.JH378287 1313369 0 - 2905041 C e aotNan1.NW_018494782v1 1524438 0 - 1813869 C e cebCap1.NW_016107695v1 1276120 211 - 2164891 T e calJac3.chr4 169910419 2 + 171630274 I e dasNov3.JH569188 592871 1337 + 760995 I e colAng1.NW_012114488v1 15629144 1919 - 23502949 I e canFam3.chr1 56193179 0 + 122678785 C e chlSab2.chr13 96704479 0 + 98384682 C e cerAty1.NW_012002071v1 1418271 169 + 3144229 T e manLeu1.NW_012106474v1 8240481 108 - 10857215 T e macNem1.NW_012011000v1 8386501 104 + 10161646 T e rheMac8.chr4 170354614 76 + 172585720 T e macFas5.chr4 169099789 0 - 170955103 C a score=38850.000000 s hg38.chr6_KB021644v2_alt 126456 23 + 185823 GGGCAGCCCGAGACTCAGGCTCA s panTro5.chr6 173582704 23 + 175400573 GGGCAGCCGGAGACTCAGGCTCA i panTro5.chr6 I 1 C 0 s panPan2.chr6 171816432 23 + 173848474 GTGCAGCCCGAGACTCAGGCTCA i panPan2.chr6 I 1 C 0 s gorGor5.CYUI01015032v1 11499168 21 - 12463322 GGGCAGCCC-AGACT-AGGCTCA i gorGor5.CYUI01015032v1 I 1 C 0 s nomLeu3.chr3 156328089 23 + 157873769 GGGCAGCCTGGGACGTGGGTGca i nomLeu3.chr3 I 81 C 0 s macFas5.chr4 169099789 23 - 170955103 GGATAACCAGGGACACTGGCCCT i macFas5.chr4 C 0 C 0 s chlSab2.chr13 96704479 23 + 98384682 GTGCAGCCCGAGACTCAGGCTCA i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169910421 23 + 171630274 AGGCAGCGAGGGACTCAGGCTCA i calJac3.chr4 I 2 C 0 s aotNan1.NW_018494782v1 1524438 23 - 1813869 GGGCAGTGAGGGATTCAGGCACA i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10967603 1070 - 12073884 I e saiBol1.JH378287 1313369 0 - 2905041 C e cebCap1.NW_016107695v1 1276120 211 - 2164891 T e dasNov3.JH569188 592871 1337 + 760995 I e colAng1.NW_012114488v1 15629144 1919 - 23502949 I e canFam3.chr1 56193179 0 + 122678785 C e cerAty1.NW_012002071v1 1418271 169 + 3144229 T e manLeu1.NW_012106474v1 8240481 108 - 10857215 T e macNem1.NW_012011000v1 8386501 104 + 10161646 T e rheMac8.chr4 170354614 76 + 172585720 T a score=31813.000000 s hg38.chr6_KB021644v2_alt 126479 7 + 185823 GGTTTTC s panTro5.chr6 173582727 7 + 175400573 GGTTTTC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171816455 7 + 173848474 GGTTTTC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11499189 6 - 12463322 -GTTTTC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156328112 7 + 157873769 ggttttc i nomLeu3.chr3 C 0 T 220 s macFas5.chr4 169099812 7 - 170955103 GGTTTTC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8386397 7 + 10161646 GGTTTTC i macNem1.NW_012011000v1 T 104 C 0 s cerAty1.NW_012002071v1 1418102 7 + 3144229 GGTTTTC i cerAty1.NW_012002071v1 T 169 C 0 s chlSab2.chr13 96704502 7 + 98384682 GGTTTTC i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169910444 7 + 171630274 GGCTCTC i calJac3.chr4 C 0 C 0 s aotNan1.NW_018494782v1 1524461 7 - 1813869 GGTTCTC i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10967603 1070 - 12073884 I e saiBol1.JH378287 1313369 0 - 2905041 C e cebCap1.NW_016107695v1 1276120 211 - 2164891 T e dasNov3.JH569188 592871 1337 + 760995 I e colAng1.NW_012114488v1 15629144 1919 - 23502949 I e canFam3.chr1 56193179 0 + 122678785 C e manLeu1.NW_012106474v1 8240481 108 - 10857215 T e rheMac8.chr4 170354614 76 + 172585720 T a score=60287.000000 s hg38.chr6_KB021644v2_alt 126486 18 + 185823 CACCTGGACCTTGGAAAG s panTro5.chr6 173582734 18 + 175400573 CACCTGGATCTTGGAAAG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171816462 18 + 173848474 CACCTGGACCTTGGAAAG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11499195 17 - 12463322 CACCTGGATC-TGGAAAG i gorGor5.CYUI01015032v1 C 0 C 0 s macFas5.chr4 169099819 18 - 170955103 CACCTGGATCTGGGAAGG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8386404 18 + 10161646 CACCTGGATCTGGGAAGG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1418109 18 + 3144229 CACCTGGATCTGGGAAAG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96704509 18 + 98384682 CACCTGGATCTGGGAATG i chlSab2.chr13 C 0 T 79 s calJac3.chr4 169910451 18 + 171630274 CACCTGGATCTGGGAATG i calJac3.chr4 C 0 C 0 s aotNan1.NW_018494782v1 1524468 18 - 1813869 CACCTGGATCTGGGAATG i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10967603 1070 - 12073884 I e saiBol1.JH378287 1313369 0 - 2905041 C e cebCap1.NW_016107695v1 1276120 211 - 2164891 T e dasNov3.JH569188 592871 1337 + 760995 I e colAng1.NW_012114488v1 15629144 1919 - 23502949 I e canFam3.chr1 56193179 0 + 122678785 C e nomLeu3.chr3 156328119 220 + 157873769 T e manLeu1.NW_012106474v1 8240481 108 - 10857215 T e rheMac8.chr4 170354614 76 + 172585720 T a score=5005.000000 s hg38.chr6_KB021644v2_alt 126504 1 + 185823 A s panTro5.chr6 173582752 1 + 175400573 A i panTro5.chr6 C 0 C 0 s panPan2.chr6 171816480 1 + 173848474 A i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11499212 1 - 12463322 A i gorGor5.CYUI01015032v1 C 0 C 0 s macFas5.chr4 169099837 1 - 170955103 A i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8386422 1 + 10161646 A i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1418127 1 + 3144229 A i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96704448 1 + 98384682 A i chlSab2.chr13 T 79 C 0 s manLeu1.NW_012106474v1 8240373 1 - 10857215 A i manLeu1.NW_012106474v1 T 108 C 0 s calJac3.chr4 169910469 1 + 171630274 A i calJac3.chr4 C 0 C 0 s aotNan1.NW_018494782v1 1524486 1 - 1813869 A i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10967603 1070 - 12073884 I e saiBol1.JH378287 1313369 0 - 2905041 C e cebCap1.NW_016107695v1 1276120 211 - 2164891 T e dasNov3.JH569188 592871 1337 + 760995 I e colAng1.NW_012114488v1 15629144 1919 - 23502949 I e canFam3.chr1 56193179 0 + 122678785 C e nomLeu3.chr3 156328119 220 + 157873769 T e rheMac8.chr4 170354614 76 + 172585720 T a score=117937.000000 s hg38.chr6_KB021644v2_alt 126505 26 + 185823 GACATCACACAGCTCAATGTCCAGGA s panTro5.chr6 173582753 26 + 175400573 GACATCACACAGCTCAGCTTCTAGGA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171816481 26 + 173848474 GACATCACACAGCTCAACGTCCAGGA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11499213 22 - 12463322 GACATC-CACAGCTC---GCTCAGGA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156327899 26 + 157873769 GGCATCACACAGCTCAGCTTCTAGGA i nomLeu3.chr3 T 220 C 0 s macFas5.chr4 169099838 26 - 170955103 GACATCACACAGCTCAGCGTCCAGGA i macFas5.chr4 C 0 T 79 s macNem1.NW_012011000v1 8386423 26 + 10161646 GACATCACACAGCTCAGCGTCCAGGA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1418128 26 + 3144229 GACATCACACAGCTCAGCGTCCAGGA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96704449 26 + 98384682 GACATCACACAGCTCAGCGTCCAGGA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8240374 26 - 10857215 GACATCACACAGCTCAGCGTCCAGGA i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169910470 24 + 171630274 GACAACAC--AACTCAGTTTCCAGGA i calJac3.chr4 C 0 C 0 s aotNan1.NW_018494782v1 1524487 26 - 1813869 GACACCACAGAGCTCAGCTTCCAGGA i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10967603 1070 - 12073884 I e saiBol1.JH378287 1313369 0 - 2905041 C e cebCap1.NW_016107695v1 1276120 211 - 2164891 T e dasNov3.JH569188 592871 1337 + 760995 I e colAng1.NW_012114488v1 15629144 1919 - 23502949 I e canFam3.chr1 56193179 0 + 122678785 C e rheMac8.chr4 170354614 76 + 172585720 T a score=-1299.000000 s hg38.chr6_KB021644v2_alt 126531 3 + 185823 -GGT s panTro5.chr6 173582779 3 + 175400573 -GGC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171816507 3 + 173848474 -GGT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11499235 1 - 12463322 -G-- i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156327925 3 + 157873769 -GGC i nomLeu3.chr3 C 0 I 80 s macFas5.chr4 169099785 3 - 170955103 -GGG i macFas5.chr4 T 79 C 0 s macNem1.NW_012011000v1 8386449 3 + 10161646 -GGC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1418154 3 + 3144229 -GGT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96704475 3 + 98384682 -GGC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8240400 3 - 10857215 -GGC i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169910494 3 + 171630274 GGG- i calJac3.chr4 C 0 C 0 s aotNan1.NW_018494782v1 1524513 3 - 1813869 GGG- i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10967603 1070 - 12073884 I e saiBol1.JH378287 1313369 0 - 2905041 C e cebCap1.NW_016107695v1 1276120 211 - 2164891 T e dasNov3.JH569188 592871 1337 + 760995 I e colAng1.NW_012114488v1 15629144 1919 - 23502949 I e canFam3.chr1 56193179 0 + 122678785 C e rheMac8.chr4 170354614 76 + 172585720 T a score=115370.000000 s hg38.chr6_KB021644v2_alt 126534 24 + 185823 GGGGCAGCCCAAGACTCAGGCTCA s panTro5.chr6 173582782 24 + 175400573 GGGGCAGCCCGAGACTCAGGCTCA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171816510 24 + 173848474 GGGGCAGCCCAAGACTCAGGCTCA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11499236 24 - 12463322 CGGGCAGCCCGAGACTCAGGCTCA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156328008 24 + 157873769 GGGGCAGCCCGAGACTCAGGCTCA i nomLeu3.chr3 I 80 C 0 s macFas5.chr4 169099788 24 - 170955103 GGGATAACCAGGGACACTGGCCCT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8386452 24 + 10161646 GGGGCAGCCCGAGACTCAGGCTCA i macNem1.NW_012011000v1 C 0 T 79 s cerAty1.NW_012002071v1 1418157 24 + 3144229 GGGGCAGCCGGAGACTCAGGCTCA i cerAty1.NW_012002071v1 C 0 T 79 s chlSab2.chr13 96704478 24 + 98384682 GGTGCAGCCCGAGACTCAGGCTCA i chlSab2.chr13 C 0 T 79 s manLeu1.NW_012106474v1 8240403 24 - 10857215 GGGGCAGCCCGAGACTCAGGCTCA i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169910497 24 + 171630274 GAGGCAGCGAGGGACTCAGGCTCA i calJac3.chr4 C 0 C 0 s aotNan1.NW_018494782v1 1524516 24 - 1813869 GAGGCAGCGAAGGACTCAGGCTCA i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10967603 1070 - 12073884 I e saiBol1.JH378287 1313369 0 - 2905041 C e cebCap1.NW_016107695v1 1276120 211 - 2164891 T e dasNov3.JH569188 592871 1337 + 760995 I e colAng1.NW_012114488v1 15629144 1919 - 23502949 I e canFam3.chr1 56193179 0 + 122678785 C e rheMac8.chr4 170354614 76 + 172585720 T a score=193021.000000 s hg38.chr6_KB021644v2_alt 126558 30 + 185823 GGTTTTCCACCTGGATCTGGGAAAG-AGACA s panTro5.chr6 173582806 30 + 175400573 GGTTTTCCACCTGGATCTGGGAAAG-AGACA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171816534 30 + 173848474 GTTTTTCCACCTGGATCTGGGAAAG-AGACA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11499260 30 - 12463322 GGTTTTCCACCTGGATCTGGGAAAG-AGACA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156328032 31 + 157873769 GGTTTTCCACCTGGATCTAGGAATGAAGGCA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170354538 30 + 172585720 GGTTTTCCACCTGGATCTGGGAAGG-AGACA i rheMac8.chr4 T 76 C 0 s macFas5.chr4 169099812 30 - 170955103 GGTTTTCCACCTGGATCTGGGAAGG-AGACA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8386397 30 + 10161646 GGTTTTCCACCTGGATCTGGGAAGG-AGACA i macNem1.NW_012011000v1 T 79 C 0 s cerAty1.NW_012002071v1 1418102 30 + 3144229 GGTTTTCCACCTGGATCTGGGAAAG-AGACA i cerAty1.NW_012002071v1 T 79 C 0 s chlSab2.chr13 96704423 30 + 98384682 GGTTTTCCACCTGGATCTGGGAAAG-AGACA i chlSab2.chr13 T 79 C 0 s manLeu1.NW_012106474v1 8240427 31 - 10857215 GGTTTTCCACCTGGATCTGGGAATGAAGACA i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169910521 30 + 171630274 AGCTCTCCACCTGGATCTGGGAATG-AGACA i calJac3.chr4 C 0 T 154 s aotNan1.NW_018494782v1 1524540 30 - 1813869 GGTTCTCCACCTGGATCTGGGAATG-AGACA i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10967603 1070 - 12073884 I e saiBol1.JH378287 1313369 0 - 2905041 C e cebCap1.NW_016107695v1 1276120 211 - 2164891 T e dasNov3.JH569188 592871 1337 + 760995 I e colAng1.NW_012114488v1 15629144 1919 - 23502949 I e canFam3.chr1 56193179 0 + 122678785 C a score=11264.000000 s hg38.chr6_KB021644v2_alt 126588 2 + 185823 TC s panTro5.chr6 173582836 2 + 175400573 TC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171816564 2 + 173848474 TC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11499290 2 - 12463322 TC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156328063 2 + 157873769 TC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170354568 2 + 172585720 TC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169099842 2 - 170955103 TC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8386427 2 + 10161646 TC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1418132 2 + 3144229 TC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96704453 2 + 98384682 TC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8240458 2 - 10857215 TC i manLeu1.NW_012106474v1 C 0 C 0 s aotNan1.NW_018494782v1 1524570 2 - 1813869 CC i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10967603 1070 - 12073884 I e saiBol1.JH378287 1313369 0 - 2905041 C e cebCap1.NW_016107695v1 1276120 211 - 2164891 T e calJac3.chr4 169910551 154 + 171630274 T e dasNov3.JH569188 592871 1337 + 760995 I e colAng1.NW_012114488v1 15629144 1919 - 23502949 I e canFam3.chr1 56193179 0 + 122678785 C a score=144941.000000 s hg38.chr6_KB021644v2_alt 126590 24 + 185823 ACACAGCTCAGCATCCAGGAGGCC s panTro5.chr6 173582838 24 + 175400573 ACACAGCTCAGCGTCCAGGAGGCG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171816566 24 + 173848474 ACATAGCTCAGCGTCCAGGAGACG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11499292 24 - 12463322 CCACAGCTCGGCGTCCAGGAGGCG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156328065 24 + 157873769 ACGCAGCTCAGCGTCCAGGAGGCG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170354570 24 + 172585720 ACACAGCTCAGCGTCCAGGAGGCG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169099844 24 - 170955103 ACACAGCTCAGCGTCCAGGAGGCG i macFas5.chr4 C 0 T 79 s macNem1.NW_012011000v1 8386429 24 + 10161646 ACACAGCTCAGCGTCCAGGAGGCG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1418134 24 + 3144229 ACACAGCTCAGCGTCCAGGAGGTG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96704455 24 + 98384682 ACACAGCTCAGCGTCCAGGAGGCG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8240460 24 - 10857215 ACACAGCTCAGCTTCTAGGagtgg i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169910397 24 + 171630274 ACACAACTCAGCTTCCAGGAGGGG i calJac3.chr4 T 154 C 0 s aotNan1.NW_018494782v1 1524572 24 - 1813869 ACACAGCTTAGCTTCCAGGACGGG i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10967603 1070 - 12073884 I e saiBol1.JH378287 1313369 0 - 2905041 C e cebCap1.NW_016107695v1 1276120 211 - 2164891 T e dasNov3.JH569188 592871 1337 + 760995 I e colAng1.NW_012114488v1 15629144 1919 - 23502949 I e canFam3.chr1 56193179 0 + 122678785 C a score=98511.000000 s hg38.chr6_KB021644v2_alt 126614 20 + 185823 GGGC-AGCCTGAGACTCAGGC s panTro5.chr6 173582862 20 + 175400573 GGGC-AGCCTGAGACTCAGGC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171816590 20 + 173848474 GGGC-AGCCCGGGACTCAGGC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11499316 20 - 12463322 GGGC-AGCCCGAGACTCAGGC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156328089 20 + 157873769 GGGC-AGCCTGGGACGTGGGT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170354594 20 + 172585720 GGGC-AGCCCGAGACTCAGGC i rheMac8.chr4 C 0 T 76 s macFas5.chr4 169099789 20 - 170955103 GGAT-AACCAGGGACACTGGC i macFas5.chr4 T 79 C 0 s macNem1.NW_012011000v1 8386453 20 + 10161646 GGGC-AGCCCGAGACTCAGGC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1418158 20 + 3144229 GGGC-AGCCGGAGACTCAGGC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96704479 20 + 98384682 GTGC-AGCCCGAGACTCAGGC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8240484 20 - 10857215 gggc-agcctgggacgtgggc i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169910421 20 + 171630274 AGGC-AGCGAGGGACTCAGGC i calJac3.chr4 C 0 C 0 s aotNan1.NW_018494782v1 1524596 21 - 1813869 GGGCAAGTGAAGGACTCAGGC i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10967603 1070 - 12073884 I e saiBol1.JH378287 1313369 0 - 2905041 C e cebCap1.NW_016107695v1 1276120 211 - 2164891 T e dasNov3.JH569188 592871 1337 + 760995 I e colAng1.NW_012114488v1 15629144 1919 - 23502949 I e canFam3.chr1 56193179 0 + 122678785 C a score=12772.000000 s hg38.chr6_KB021644v2_alt 126634 3 + 185823 TCA s panTro5.chr6 173582882 3 + 175400573 TCA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171816610 3 + 173848474 TCA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11499336 3 - 12463322 TCA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156328109 3 + 157873769 Gca i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169099809 3 - 170955103 CCT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8386473 3 + 10161646 TCA i macNem1.NW_012011000v1 C 0 T 79 s cerAty1.NW_012002071v1 1418178 3 + 3144229 TCA i cerAty1.NW_012002071v1 C 0 T 79 s chlSab2.chr13 96704499 3 + 98384682 TCA i chlSab2.chr13 C 0 T 79 s manLeu1.NW_012106474v1 8240504 3 - 10857215 tca i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169910441 3 + 171630274 TCA i calJac3.chr4 C 0 C 0 s aotNan1.NW_018494782v1 1524617 3 - 1813869 TCA i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10967603 1070 - 12073884 I e saiBol1.JH378287 1313369 0 - 2905041 C e cebCap1.NW_016107695v1 1276120 211 - 2164891 T e dasNov3.JH569188 592871 1337 + 760995 I e colAng1.NW_012114488v1 15629144 1919 - 23502949 I e canFam3.chr1 56193179 0 + 122678785 C e rheMac8.chr4 170354614 76 + 172585720 T a score=7800.000000 s hg38.chr6_KB021644v2_alt 126637 1 + 185823 G s panTro5.chr6 173582885 1 + 175400573 G i panTro5.chr6 C 0 C 0 s panPan2.chr6 171816613 1 + 173848474 G i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11499339 1 - 12463322 G i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156328112 1 + 157873769 g i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170354538 1 + 172585720 G i rheMac8.chr4 T 76 C 0 s macFas5.chr4 169099812 1 - 170955103 G i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8386397 1 + 10161646 G i macNem1.NW_012011000v1 T 79 C 0 s cerAty1.NW_012002071v1 1418102 1 + 3144229 G i cerAty1.NW_012002071v1 T 79 C 0 s chlSab2.chr13 96704423 1 + 98384682 G i chlSab2.chr13 T 79 C 0 s manLeu1.NW_012106474v1 8240507 1 - 10857215 g i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169910444 1 + 171630274 G i calJac3.chr4 C 0 C 0 s aotNan1.NW_018494782v1 1524620 1 - 1813869 G i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10967603 1070 - 12073884 I e saiBol1.JH378287 1313369 0 - 2905041 C e cebCap1.NW_016107695v1 1276120 211 - 2164891 T e dasNov3.JH569188 592871 1337 + 760995 I e colAng1.NW_012114488v1 15629144 1919 - 23502949 I e canFam3.chr1 56193179 0 + 122678785 C a score=45116.000000 s hg38.chr6_KB021644v2_alt 126638 6 + 185823 GTTTTC s panTro5.chr6 173582886 6 + 175400573 GTTTTC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171816614 6 + 173848474 GTTTTC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11499340 6 - 12463322 GTTTTC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156328113 6 + 157873769 gttttc i nomLeu3.chr3 C 0 T 227 s rheMac8.chr4 170354539 6 + 172585720 GTTTTC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169099813 6 - 170955103 GTTTTC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8386398 6 + 10161646 GTTTTC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1418103 6 + 3144229 GTTTTC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96704424 6 + 98384682 GTTTTC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8240508 6 - 10857215 attttc i manLeu1.NW_012106474v1 C 0 T 141 s calJac3.chr4 169910445 6 + 171630274 GCTCTC i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1275909 6 - 2164891 GTTTTC i cebCap1.NW_016107695v1 T 211 C 0 s aotNan1.NW_018494782v1 1524621 6 - 1813869 GTTCTC i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10967603 1070 - 12073884 I e saiBol1.JH378287 1313369 0 - 2905041 C e dasNov3.JH569188 592871 1337 + 760995 I e colAng1.NW_012114488v1 15629144 1919 - 23502949 I e canFam3.chr1 56193179 0 + 122678785 C a score=66197.000000 s hg38.chr6_KB021644v2_alt 126644 12 + 185823 CACCTGGATCTC s panTro5.chr6 173582892 12 + 175400573 CACCTGGATCTG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171816620 12 + 173848474 CACCTGGATCTC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11499346 12 - 12463322 CACCTGGATCTT i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170354545 12 + 172585720 CACCTGGATCTG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169099819 12 - 170955103 CACCTGGATCTG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8386404 12 + 10161646 CACCTGGATCTG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1418109 12 + 3144229 CACCTGGATCTG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96704430 12 + 98384682 CACCTGGATCTG i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169910451 12 + 171630274 CACCTGGATCTG i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1275915 12 - 2164891 TACCTGGATATG i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1524627 12 - 1813869 CACCTGGATCTG i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10967603 1070 - 12073884 I e saiBol1.JH378287 1313369 0 - 2905041 C e dasNov3.JH569188 592871 1337 + 760995 I e colAng1.NW_012114488v1 15629144 1919 - 23502949 I e canFam3.chr1 56193179 0 + 122678785 C e nomLeu3.chr3 156328119 227 + 157873769 T e manLeu1.NW_012106474v1 8240514 141 - 10857215 T a score=30984.000000 s hg38.chr6_KB021644v2_alt 126656 6 + 185823 GGAAAG s panTro5.chr6 173582904 6 + 175400573 GGAAAG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171816632 6 + 173848474 GGAAAG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11499358 6 - 12463322 GGAAAG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156327892 6 + 157873769 GAATGA i nomLeu3.chr3 T 227 C 0 s rheMac8.chr4 170354557 6 + 172585720 GGAAGG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169099831 6 - 170955103 GGAAGG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8386416 6 + 10161646 GGAAGG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1418121 6 + 3144229 GGAAAG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96704442 6 + 98384682 GGAAAG i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169910463 6 + 171630274 GGAATG i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1275927 6 - 2164891 GGAAAG i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1524639 6 - 1813869 GGAATG i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10967603 1070 - 12073884 I e saiBol1.JH378287 1313369 0 - 2905041 C e dasNov3.JH569188 592871 1337 + 760995 I e colAng1.NW_012114488v1 15629144 1919 - 23502949 I e canFam3.chr1 56193179 0 + 122678785 C e manLeu1.NW_012106474v1 8240514 141 - 10857215 T a score=38792.000000 s hg38.chr6_KB021644v2_alt 126662 5 + 185823 AGACA s panTro5.chr6 173582910 5 + 175400573 AGACA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171816638 5 + 173848474 AGACA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11499364 5 - 12463322 AGACA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156327898 5 + 157873769 AGGCA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170354563 5 + 172585720 AGACA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169099837 5 - 170955103 AGACA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8386422 5 + 10161646 AGACA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1418127 5 + 3144229 AGACA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96704448 5 + 98384682 AGACA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8240373 5 - 10857215 AGACA i manLeu1.NW_012106474v1 T 141 C 0 s calJac3.chr4 169910469 5 + 171630274 AGACA i calJac3.chr4 C 0 T 154 s cebCap1.NW_016107695v1 1275933 5 - 2164891 AGACC i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1524645 5 - 1813869 AGACA i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10967603 1070 - 12073884 I e saiBol1.JH378287 1313369 0 - 2905041 C e dasNov3.JH569188 592871 1337 + 760995 I e colAng1.NW_012114488v1 15629144 1919 - 23502949 I e canFam3.chr1 56193179 0 + 122678785 C a score=12223.000000 s hg38.chr6_KB021644v2_alt 126667 2 + 185823 TC s panTro5.chr6 173582915 2 + 175400573 TC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171816643 2 + 173848474 TC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11499369 2 - 12463322 TC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156327903 2 + 157873769 TC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170354568 2 + 172585720 TC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169099842 2 - 170955103 TC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8386427 2 + 10161646 TC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1418132 2 + 3144229 TC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96704453 2 + 98384682 TC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8240378 2 - 10857215 TC i manLeu1.NW_012106474v1 C 0 C 0 s cebCap1.NW_016107695v1 1275938 2 - 2164891 CC i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1524650 2 - 1813869 CC i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10967603 1070 - 12073884 I e saiBol1.JH378287 1313369 0 - 2905041 C e calJac3.chr4 169910474 154 + 171630274 T e dasNov3.JH569188 592871 1337 + 760995 I e colAng1.NW_012114488v1 15629144 1919 - 23502949 I e canFam3.chr1 56193179 0 + 122678785 C a score=176247.000000 s hg38.chr6_KB021644v2_alt 126669 24 + 185823 ACACAGCTCAGCATCCAGGAGGCG s panTro5.chr6 173582917 24 + 175400573 ACACAGCTCAGCATCCAGGAGGCG i panTro5.chr6 C 0 I 77 s panPan2.chr6 171816645 24 + 173848474 ACACAGCTCAGCGTCCAGGAGGCG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11499371 24 - 12463322 ACACAGCTCAGCGTCCATGAGGCG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156327905 24 + 157873769 ACACAGCTCAGCTTCTAGGAGGCG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170354570 24 + 172585720 ACACAGCTCAGCGTCCAGGAGGCG i rheMac8.chr4 C 0 I 28 s macFas5.chr4 169099844 24 - 170955103 ACACAGCTCAGCGTCCAGGAGGCG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8386429 24 + 10161646 ACACAGCTCAGCGTCCAGGAGGCG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1418134 24 + 3144229 ACACAGCTCAGCGTCCAGGAGGTG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96704455 24 + 98384682 ACACAGCTCAGCGTCCAGGAGGCG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8240380 24 - 10857215 ACACAGCTCAGCGTCCAGGAGGCG i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169910320 24 + 171630274 ACACAACTCAGCTTCCAGGAGGGG i calJac3.chr4 T 154 C 0 s cebCap1.NW_016107695v1 1275940 24 - 2164891 ATACAACTCAGCCTCCAGGAGAGG i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1524652 24 - 1813869 ACACAGCTTAGCTTCCAGGACGGG i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10967603 1070 - 12073884 I e saiBol1.JH378287 1313369 0 - 2905041 C e dasNov3.JH569188 592871 1337 + 760995 I e colAng1.NW_012114488v1 15629144 1919 - 23502949 I e canFam3.chr1 56193179 0 + 122678785 C a score=154431.000000 s hg38.chr6_KB021644v2_alt 126693 23 + 185823 GGGCAGCCCAAGACTCAGGCTCA s panTro5.chr6 173583018 23 + 175400573 GGGCAGCCCAAAACTTAGGCTCA i panTro5.chr6 I 77 C 0 s panPan2.chr6 171816669 23 + 173848474 GGGCAGCCCAAAACTTAGGCTCA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11499395 23 - 12463322 GGGCAGCCCAAGACTTAGGCTCA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156327929 23 + 157873769 GGGCAGCCCGAGACTCAGGCTCA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170354622 23 + 172585720 GGGCAGCCCGAGACTCAGGCTCA i rheMac8.chr4 I 28 C 0 s macFas5.chr4 169099868 23 - 170955103 GGGCAGCCCGAGACTCAGGCTCA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8386453 23 + 10161646 GGGCAGCCCGAGACTCAGGCTCA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1418158 23 + 3144229 GGGCAGCCGGAGACTCAGGCTCA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96704479 23 + 98384682 GTGCAGCCCGAGACTCAGGCTCA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8240404 23 - 10857215 GGGCAGCCCGAGACTCAGGCTCA i manLeu1.NW_012106474v1 C 0 T 186 s calJac3.chr4 169910344 23 + 171630274 AGGCTGTGAAGGACTCAGGCTCA i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1275964 23 - 2164891 AGGCAGGGAAGGACTCAGGCTCA i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1524676 23 - 1813869 GGGCAGTGAAGGACTCAGGCTCA i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10967603 1070 - 12073884 I e saiBol1.JH378287 1313369 0 - 2905041 C e dasNov3.JH569188 592871 1337 + 760995 I e colAng1.NW_012114488v1 15629144 1919 - 23502949 I e canFam3.chr1 56193179 0 + 122678785 C a score=185580.000000 s hg38.chr6_KB021644v2_alt 126716 27 + 185823 GGTTTTCCATCTGGATCTGGGAATGAA s panTro5.chr6 173583041 27 + 175400573 GGTTTTCCACCTGGATCTGGGAATGAA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171816692 27 + 173848474 GGTTTTCCACCTGGATCTGGGAATGAA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11499418 26 - 12463322 GGTTTTCCACCTGGATCTGGGAAAG-A i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156327952 27 + 157873769 GGTTTTCCACCTGGATCTGGGAATGAA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170354645 27 + 172585720 GGTTTTCCACCTGGATCTGGGAATGAA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169099891 27 - 170955103 GGTTTTCCACCTGGATCTGGGAATGAA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8386476 27 + 10161646 GGTTTTCCACCTGGATCTGGGAATGAA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1418181 27 + 3144229 GGTTTTCCACCTGGATCTGGTTATGAA i cerAty1.NW_012002071v1 C 0 T 80 s chlSab2.chr13 96704502 27 + 98384682 GGTTTTCCACCTGGATCTGGGAATGAA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8240241 27 - 10857215 GGTTTTCCACCTGGATCTGGGAATGAA i manLeu1.NW_012106474v1 T 186 C 0 s calJac3.chr4 169910367 26 + 171630274 GGCTTTCCACCTGGATCTGGGAATGA- i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1275987 26 - 2164891 GGTTCTCCACCCGGATCTGGGAATCA- i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1524699 26 - 1813869 GGTTCTCCACCTGTATCTGGGAATGT- i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10967603 1070 - 12073884 I e saiBol1.JH378287 1313369 0 - 2905041 C e dasNov3.JH569188 592871 1337 + 760995 I e colAng1.NW_012114488v1 15629144 1919 - 23502949 I e canFam3.chr1 56193179 0 + 122678785 C a score=208627.000000 s hg38.chr6_KB021644v2_alt 126743 30 + 185823 GACATCACACAGCTCAGCGTCCAGGAGGTG s panTro5.chr6 173583068 30 + 175400573 GACATCACACAGCTCAGCTTTCAGGAGGCG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171816719 30 + 173848474 GACATCACAGAGCTCAGCGTTCAGGAGGCG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11499444 30 - 12463322 GACATCACACAGCTCAGCGTCCAGGAGGCG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156327979 30 + 157873769 GGCATCACACAGCTCAACGTCCAGGAGGCG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170354672 30 + 172585720 GACATCACACAGCTCAGCTTCTAGGAGGGG i rheMac8.chr4 C 0 T 80 s macFas5.chr4 169099918 30 - 170955103 GACATCACACAGCTCAGCTTCTAGGAGGGG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8386503 30 + 10161646 GACATCACACAGCTCAGCTTCTAGGAGGGG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1418128 30 + 3144229 GACATCACACAGCTCAGCGTCCAGGAGGTG i cerAty1.NW_012002071v1 T 80 C 0 s chlSab2.chr13 96704529 30 + 98384682 GACATCACACAGCTCAGCTTCTAggaggca i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8240268 30 - 10857215 GACATCACACAGCTCAGCGTCCAGGAGGCG i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169910393 28 + 171630274 GACA--ACACAACTCAGCTTCCAGGAGGGG i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1276013 30 - 2164891 GATACCACACAGCTCAGCCTCCAGGAGGGG i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1524725 30 - 1813869 GACACCACACAGCTCAGCCTCCAGGAGGTG i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10967603 1070 - 12073884 I e saiBol1.JH378287 1313369 0 - 2905041 C e dasNov3.JH569188 592871 1337 + 760995 I e colAng1.NW_012114488v1 15629144 1919 - 23502949 I e canFam3.chr1 56193179 0 + 122678785 C a score=50441.000000 s hg38.chr6_KB021644v2_alt 126773 9 + 185823 GGGCAGCCC s panTro5.chr6 173583098 9 + 175400573 GGGCAGCCT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171816749 9 + 173848474 GGGCAGCCC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11499474 9 - 12463322 GGGCAGCCT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156328009 9 + 157873769 GGGCAGCCC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170354622 9 + 172585720 GGGCAGCCC i rheMac8.chr4 T 80 C 0 s macFas5.chr4 169099948 9 - 170955103 GGGCAGCCC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8386533 9 + 10161646 GGGCAGCCC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1418158 9 + 3144229 GGGCAGCCG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96704559 9 + 98384682 gggtagccc i chlSab2.chr13 C 0 T 80 s manLeu1.NW_012106474v1 8240298 9 - 10857215 GGGCAGCCC i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169910421 9 + 171630274 AGGCAGCGA i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1276043 9 - 2164891 AGGCAGTGA i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1524755 9 - 1813869 AGTCAGTGA i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10967603 1070 - 12073884 I e saiBol1.JH378287 1313369 0 - 2905041 C e dasNov3.JH569188 592871 1337 + 760995 I e colAng1.NW_012114488v1 15629144 1919 - 23502949 I e canFam3.chr1 56193179 0 + 122678785 C a score=33834.000000 s hg38.chr6_KB021644v2_alt 126782 5 + 185823 GAGAC s panTro5.chr6 173583107 5 + 175400573 GAGAC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171816758 5 + 173848474 GAGAC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11499483 5 - 12463322 GAGAC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156328018 5 + 157873769 GAGAC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170354631 5 + 172585720 GAGAC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169099957 5 - 170955103 GGGAC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8386542 5 + 10161646 GGGAC i macNem1.NW_012011000v1 C 0 T 80 s cerAty1.NW_012002071v1 1418167 5 + 3144229 GAGAC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96704488 5 + 98384682 GAGAC i chlSab2.chr13 T 80 C 0 s manLeu1.NW_012106474v1 8240307 5 - 10857215 GAGAC i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169910430 5 + 171630274 GGGAC i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1276052 5 - 2164891 AGGAC i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1524764 5 - 1813869 GGGAG i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10967603 1070 - 12073884 I e saiBol1.JH378287 1313369 0 - 2905041 C e dasNov3.JH569188 592871 1337 + 760995 I e colAng1.NW_012114488v1 15629144 1919 - 23502949 I e canFam3.chr1 56193179 0 + 122678785 C a score=69745.000000 s hg38.chr6_KB021644v2_alt 126787 9 + 185823 TCAGGCTCA s panTro5.chr6 173583112 9 + 175400573 TCAGGCTCA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171816763 9 + 173848474 TCAGGCTCA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11499488 9 - 12463322 TCAGGCTCA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156328023 9 + 157873769 TCAGGCTCA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170354636 9 + 172585720 TCAGGCTCA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169099962 9 - 170955103 GTGCGCTca i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8386467 9 + 10161646 TCAGGCTCA i macNem1.NW_012011000v1 T 80 C 0 s cerAty1.NW_012002071v1 1418172 9 + 3144229 TCAGGCTCA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96704493 9 + 98384682 TCAGGCTCA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8240312 9 - 10857215 TCAGGCTCA i manLeu1.NW_012106474v1 C 0 T 80 s calJac3.chr4 169910435 9 + 171630274 TCAGGCTCA i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1276057 9 - 2164891 TCAGGCTCA i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1524769 9 - 1813869 TCAGGCTCA i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10967603 1070 - 12073884 I e saiBol1.JH378287 1313369 0 - 2905041 C e dasNov3.JH569188 592871 1337 + 760995 I e colAng1.NW_012114488v1 15629144 1919 - 23502949 I e canFam3.chr1 56193179 0 + 122678785 C a score=53136.000000 s hg38.chr6_KB021644v2_alt 126796 7 + 185823 GGTTTTC s panTro5.chr6 173583121 7 + 175400573 GGTTTTC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171816772 7 + 173848474 GGTTTTC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11499497 7 - 12463322 GGTTTTC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156328032 7 + 157873769 GGTTTTC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170354645 7 + 172585720 GGTTTTC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169099971 7 - 170955103 gattttc i macFas5.chr4 C 0 T 80 s macNem1.NW_012011000v1 8386476 7 + 10161646 GGTTTTC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1418181 7 + 3144229 GGTTTTC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96704502 7 + 98384682 GGTTTTC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8240241 7 - 10857215 GGTTTTC i manLeu1.NW_012106474v1 T 80 C 0 s calJac3.chr4 169910444 7 + 171630274 GGCTCTC i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1276066 7 - 2164891 GGTTCTC i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1524778 7 - 1813869 GGTTCTC i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10967603 1070 - 12073884 I e saiBol1.JH378287 1313369 0 - 2905041 C e dasNov3.JH569188 592871 1337 + 760995 I e colAng1.NW_012114488v1 15629144 1919 - 23502949 I e canFam3.chr1 56193179 0 + 122678785 C a score=77038.000000 s hg38.chr6_KB021644v2_alt 126803 9 + 185823 CACCTGGAT s panTro5.chr6 173583128 9 + 175400573 CACCTGGAT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171816779 9 + 173848474 CACCTGGAT i panPan2.chr6 C 0 T 238 s gorGor5.CYUI01015032v1 11499504 9 - 12463322 CACCTGGAT i gorGor5.CYUI01015032v1 C 0 I 157 s nomLeu3.chr3 156328039 9 + 157873769 CACCTGGAT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170354652 9 + 172585720 CACCTGGAT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169099898 9 - 170955103 CACCTGGAT i macFas5.chr4 T 80 C 0 s macNem1.NW_012011000v1 8386483 9 + 10161646 CACCTGGAT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1418188 9 + 3144229 CACCTGGAT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96704509 9 + 98384682 CACCTGGAT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8240248 9 - 10857215 CACCTGGAT i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169910451 9 + 171630274 CACCTGGAT i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1276073 9 - 2164891 CACCCGGAT i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1524785 9 - 1813869 CACCTGGAT i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10967603 1070 - 12073884 I e saiBol1.JH378287 1313369 0 - 2905041 C e dasNov3.JH569188 592871 1337 + 760995 I e colAng1.NW_012114488v1 15629144 1919 - 23502949 I e canFam3.chr1 56193179 0 + 122678785 C a score=52672.000000 s hg38.chr6_KB021644v2_alt 126812 10 + 185823 CTGGGAATGA s panTro5.chr6 173583137 9 + 175400573 CTCGGAAAG- i panTro5.chr6 C 0 C 0 s panPan2.chr6 171816550 9 + 173848474 CTGGGAAAG- i panPan2.chr6 T 238 C 0 s gorGor5.CYUI01015032v1 11499670 10 - 12463322 CTGGGAATGA i gorGor5.CYUI01015032v1 I 157 C 0 s nomLeu3.chr3 156328048 10 + 157873769 CTAGGAATGA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170354661 10 + 172585720 CTGGGAATGA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169099907 10 - 170955103 CTGGGAATGA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8386492 10 + 10161646 CTGGGAATGA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1418197 10 + 3144229 CTGGTTATGA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96704518 10 + 98384682 CTGGGAATGA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8240257 10 - 10857215 CTGGGAATGA i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169910460 10 + 171630274 CTGGGAATGA i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1276082 10 - 2164891 CTGGAAATGA i cebCap1.NW_016107695v1 C 0 I 61 s aotNan1.NW_018494782v1 1524794 9 - 1813869 CTGGGAATG- i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10967603 1070 - 12073884 I e saiBol1.JH378287 1313369 0 - 2905041 C e dasNov3.JH569188 592871 1337 + 760995 I e colAng1.NW_012114488v1 15629144 1919 - 23502949 I e canFam3.chr1 56193179 0 + 122678785 C a score=6006.000000 s hg38.chr6_KB021644v2_alt 126822 1 + 185823 A s panTro5.chr6 173583146 1 + 175400573 A i panTro5.chr6 C 0 C 0 s panPan2.chr6 171816559 1 + 173848474 A i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11499680 1 - 12463322 A i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156328058 1 + 157873769 A i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170354671 1 + 172585720 A i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169099917 1 - 170955103 A i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8386502 1 + 10161646 A i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1418207 1 + 3144229 A i cerAty1.NW_012002071v1 C 0 I 80 s chlSab2.chr13 96704528 1 + 98384682 A i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8240267 1 - 10857215 A i manLeu1.NW_012106474v1 C 0 C 0 s aotNan1.NW_018494782v1 1524803 1 - 1813869 A i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10967603 1070 - 12073884 I e saiBol1.JH378287 1313369 0 - 2905041 C e cebCap1.NW_016107695v1 1276092 61 - 2164891 I e calJac3.chr4 169910470 0 + 171630274 C e dasNov3.JH569188 592871 1337 + 760995 I e colAng1.NW_012114488v1 15629144 1919 - 23502949 I e canFam3.chr1 56193179 0 + 122678785 C a score=52133.000000 s hg38.chr6_KB021644v2_alt 126823 9 + 185823 GACATCACA s panTro5.chr6 173583147 9 + 175400573 GACATCACA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171816560 9 + 173848474 GACATCACA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11499681 9 - 12463322 GACATGACA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156328059 9 + 157873769 GGCATCACG i nomLeu3.chr3 C 0 T 80 s rheMac8.chr4 170354672 9 + 172585720 GACATCACA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169099918 9 - 170955103 GACATCACA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8386503 9 + 10161646 GACATCACA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1418288 9 + 3144229 GACATCACA i cerAty1.NW_012002071v1 I 80 C 0 s chlSab2.chr13 96704529 9 + 98384682 GACATCACA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8240268 9 - 10857215 GACATCACA i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169910470 7 + 171630274 GACA--ACA i calJac3.chr4 C 0 C 0 s aotNan1.NW_018494782v1 1524804 9 - 1813869 GACACCACA i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10967603 1070 - 12073884 I e saiBol1.JH378287 1313369 0 - 2905041 C e cebCap1.NW_016107695v1 1276092 61 - 2164891 I e dasNov3.JH569188 592871 1337 + 760995 I e colAng1.NW_012114488v1 15629144 1919 - 23502949 I e canFam3.chr1 56193179 0 + 122678785 C a score=174289.000000 s hg38.chr6_KB021644v2_alt 126832 30 + 185823 CAGCTCAGCGTCCAGGAGGTGGGGCAGCCC s panTro5.chr6 173583156 30 + 175400573 CAGCTCAGCGTCCAGGAGGCGGGGCAGCCC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171816569 30 + 173848474 TAGCTCAGCGTCCAGGAGACGGGGCAGCCC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11499690 30 - 12463322 CAGCTCAGCgtccaggaggcagggcagccc i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156327988 30 + 157873769 CAGCTCAACGTCCAGGAGGCGGGGCAGCCC i nomLeu3.chr3 T 80 C 0 s rheMac8.chr4 170354681 30 + 172585720 CAGCTCAGCTTCTAGGAGGGGGGGCAGCCC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169099927 30 - 170955103 CAGCTCAGCTTCTAGGAGGGGGGGCAGCCC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8386512 30 + 10161646 CAGCTCAGCTTCTAGGAGGGGGGGCAGCCC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1418297 30 + 3144229 CAGCTCAGCTTCTAGGAGGGGGGGCagccc i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96704538 30 + 98384682 CAGCTCAGCTTCTAggaggcagggtagccc i chlSab2.chr13 C 0 T 80 s manLeu1.NW_012106474v1 8240277 30 - 10857215 CAGCTCAGCGTCCAGGAGGCGGGGCAGCCC i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169910477 30 + 171630274 CAACTCAGTTTCCAGGAGGGGAGGCAGCGA i calJac3.chr4 C 0 C 0 s aotNan1.NW_018494782v1 1524813 30 - 1813869 CAGCTCAGCCTCCAGGAGGTGAGTCAGTGA i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10967603 1070 - 12073884 I e saiBol1.JH378287 1313369 0 - 2905041 C e cebCap1.NW_016107695v1 1276092 61 - 2164891 I e dasNov3.JH569188 592871 1337 + 760995 I e colAng1.NW_012114488v1 15629144 1919 - 23502949 I e canFam3.chr1 56193179 0 + 122678785 C a score=18070.000000 s hg38.chr6_KB021644v2_alt 126862 3 + 185823 GAG s panTro5.chr6 173583186 3 + 175400573 GAG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171816599 3 + 173848474 GGG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11499720 3 - 12463322 ggg i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156328018 3 + 157873769 GAG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170354711 3 + 172585720 GGG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169099957 3 - 170955103 GGG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8386542 3 + 10161646 GGG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1418327 3 + 3144229 ggg i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96704488 3 + 98384682 GAG i chlSab2.chr13 T 80 C 0 s manLeu1.NW_012106474v1 8240307 3 - 10857215 GAG i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169910507 3 + 171630274 GGG i calJac3.chr4 C 0 C 0 s aotNan1.NW_018494782v1 1524843 3 - 1813869 GGG i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10967603 1070 - 12073884 I e saiBol1.JH378287 1313369 0 - 2905041 C e cebCap1.NW_016107695v1 1276092 61 - 2164891 I e dasNov3.JH569188 592871 1337 + 760995 I e colAng1.NW_012114488v1 15629144 1919 - 23502949 I e canFam3.chr1 56193179 0 + 122678785 C a score=14456.000000 s hg38.chr6_KB021644v2_alt 126865 2 + 185823 AC s panTro5.chr6 173583189 2 + 175400573 AC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171816602 2 + 173848474 AC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11499723 2 - 12463322 ac i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156328021 2 + 157873769 AC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170354714 2 + 172585720 AC i rheMac8.chr4 C 0 T 178 s macFas5.chr4 169099960 2 - 170955103 AC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8386545 2 + 10161646 AC i macNem1.NW_012011000v1 C 0 T 80 s cerAty1.NW_012002071v1 1418330 2 + 3144229 ac i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96704491 2 + 98384682 AC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8240310 2 - 10857215 AC i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169910510 2 + 171630274 AC i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1276153 2 - 2164891 AC i cebCap1.NW_016107695v1 I 61 C 0 s aotNan1.NW_018494782v1 1524846 2 - 1813869 AG i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10967603 1070 - 12073884 I e saiBol1.JH378287 1313369 0 - 2905041 C e dasNov3.JH569188 592871 1337 + 760995 I e colAng1.NW_012114488v1 15629144 1919 - 23502949 I e canFam3.chr1 56193179 0 + 122678785 C a score=50979.000000 s hg38.chr6_KB021644v2_alt 126867 9 + 185823 TCAGGCTCA s panTro5.chr6 173583191 9 + 175400573 TCAGGCTCA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171816604 9 + 173848474 TCAGGCTCA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11499725 9 - 12463322 gtgggctca i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156328023 9 + 157873769 TCAGGCTCA i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169099962 9 - 170955103 GTGCGCTca i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8386467 9 + 10161646 TCAGGCTCA i macNem1.NW_012011000v1 T 80 C 0 s cerAty1.NW_012002071v1 1418332 9 + 3144229 gtgggctca i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96704493 9 + 98384682 TCAGGCTCA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8240312 9 - 10857215 TCAGGCTCA i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169910512 9 + 171630274 TCAGGCTCA i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1276155 9 - 2164891 TCAGGCTCA i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1524848 9 - 1813869 TCAGGCTCA i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10967603 1070 - 12073884 I e saiBol1.JH378287 1313369 0 - 2905041 C e dasNov3.JH569188 592871 1337 + 760995 I e colAng1.NW_012114488v1 15629144 1919 - 23502949 I e canFam3.chr1 56193179 0 + 122678785 C e rheMac8.chr4 170354716 178 + 172585720 T a score=8840.000000 s hg38.chr6_KB021644v2_alt 126876 7 + 185823 GG--------------------------------------------------TTTTC s panTro5.chr6 173583200 7 + 175400573 GG--------------------------------------------------TTTTC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171816613 7 + 173848474 GG--------------------------------------------------TTTTC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11499734 7 - 12463322 gg--------------------------------------------------ttttc i gorGor5.CYUI01015032v1 C 0 T 228 s nomLeu3.chr3 156328032 7 + 157873769 GG--------------------------------------------------TTTTC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170354538 7 + 172585720 GG--------------------------------------------------TTTTC i rheMac8.chr4 T 178 C 0 s macFas5.chr4 169099971 7 - 170955103 ga--------------------------------------------------ttttc i macFas5.chr4 C 0 I 6 s macNem1.NW_012011000v1 8386476 7 + 10161646 GG--------------------------------------------------TTTTC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1418341 7 + 3144229 ga--------------------------------------------------ttttc i cerAty1.NW_012002071v1 C 0 T 141 s chlSab2.chr13 96704502 7 + 98384682 GG--------------------------------------------------TTTTC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8240321 52 - 10857215 GGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN----- i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169910521 7 + 171630274 AG--------------------------------------------------CTCTC i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1276164 7 - 2164891 GG--------------------------------------------------CTCTC i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1524857 7 - 1813869 GT--------------------------------------------------TTCTC i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10967603 1070 - 12073884 I e saiBol1.JH378287 1313369 0 - 2905041 C e dasNov3.JH569188 592871 1337 + 760995 I e colAng1.NW_012114488v1 15629144 1919 - 23502949 I e canFam3.chr1 56193179 0 + 122678785 C a score=30910.000000 s hg38.chr6_KB021644v2_alt 126883 7 + 185823 CACCTGG s panTro5.chr6 173583207 7 + 175400573 CACCTGG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171816620 7 + 173848474 CACCTGG i panPan2.chr6 C 0 C 0 s nomLeu3.chr3 156328039 7 + 157873769 CACCTGG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170354545 7 + 172585720 CACCTGG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169099984 5 - 170955103 cacct-- i macFas5.chr4 I 6 C 0 s macNem1.NW_012011000v1 8386483 7 + 10161646 CACCTGG i macNem1.NW_012011000v1 C 0 C 0 s chlSab2.chr13 96704509 7 + 98384682 CACCTGG i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169910528 7 + 171630274 CACCTGG i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1276171 7 - 2164891 CACCTGG i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1524864 7 - 1813869 CACCTGG i aotNan1.NW_018494782v1 C 0 T 237 e otoGar3.GL873575 10967603 1070 - 12073884 I e saiBol1.JH378287 1313369 0 - 2905041 C e dasNov3.JH569188 592871 1337 + 760995 I e colAng1.NW_012114488v1 15629144 1919 - 23502949 I e canFam3.chr1 56193179 0 + 122678785 C e cerAty1.NW_012002071v1 1418348 141 + 3144229 T e manLeu1.NW_012106474v1 8240373 0 - 10857215 C e gorGor5.CYUI01015032v1 11499741 228 - 12463322 T a score=5683.000000 s hg38.chr6_KB021644v2_alt 126890 2 + 185823 TC s panTro5.chr6 173583214 2 + 175400573 AT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171816627 2 + 173848474 AT i panPan2.chr6 C 0 I 159 s nomLeu3.chr3 156328046 2 + 157873769 AT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170354552 2 + 172585720 AT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169099989 2 - 170955103 ac i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8386490 2 + 10161646 AT i macNem1.NW_012011000v1 C 0 C 0 s chlSab2.chr13 96704516 2 + 98384682 AT i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169910535 2 + 171630274 AT i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1276178 2 - 2164891 AT i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1524634 2 - 1813869 AT i aotNan1.NW_018494782v1 T 237 C 0 e otoGar3.GL873575 10967603 1070 - 12073884 I e saiBol1.JH378287 1313369 0 - 2905041 C e dasNov3.JH569188 592871 1337 + 760995 I e colAng1.NW_012114488v1 15629144 1919 - 23502949 I e canFam3.chr1 56193179 0 + 122678785 C e cerAty1.NW_012002071v1 1418348 141 + 3144229 T e manLeu1.NW_012106474v1 8240373 0 - 10857215 C e gorGor5.CYUI01015032v1 11499741 228 - 12463322 T a score=11351.000000 s hg38.chr6_KB021644v2_alt 126892 3 + 185823 CTT s panTro5.chr6 173583216 3 + 175400573 CTT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171816788 3 + 173848474 CTT i panPan2.chr6 I 159 C 0 s gorGor5.CYUI01015032v1 11499513 3 - 12463322 CTT i gorGor5.CYUI01015032v1 T 228 C 0 s nomLeu3.chr3 156328048 3 + 157873769 CTA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170354554 3 + 172585720 CTG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169099991 3 - 170955103 ctg i macFas5.chr4 C 0 T 157 s macNem1.NW_012011000v1 8386492 3 + 10161646 CTG i macNem1.NW_012011000v1 C 0 C 0 s chlSab2.chr13 96704518 3 + 98384682 CTG i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169910537 3 + 171630274 CTG i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1276180 3 - 2164891 CTG i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1524636 3 - 1813869 CTG i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10967603 1070 - 12073884 I e saiBol1.JH378287 1313369 0 - 2905041 C e dasNov3.JH569188 592871 1337 + 760995 I e colAng1.NW_012114488v1 15629144 1919 - 23502949 I e canFam3.chr1 56193179 0 + 122678785 C e cerAty1.NW_012002071v1 1418348 141 + 3144229 T e manLeu1.NW_012106474v1 8240373 0 - 10857215 C a score=24661.000000 s hg38.chr6_KB021644v2_alt 126895 6 + 185823 GGAAAG s panTro5.chr6 173583219 6 + 175400573 GGAAAG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171816791 6 + 173848474 GGAAAG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11499516 6 - 12463322 GGAAAG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156328051 6 + 157873769 GGAATG i nomLeu3.chr3 C 0 T 79 s rheMac8.chr4 170354557 6 + 172585720 GGAAGG i rheMac8.chr4 C 0 C 0 s macNem1.NW_012011000v1 8386495 6 + 10161646 GGAATG i macNem1.NW_012011000v1 C 0 T 79 s chlSab2.chr13 96704521 6 + 98384682 GGAATG i chlSab2.chr13 C 0 T 79 s calJac3.chr4 169910540 6 + 171630274 GGAATG i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1276183 6 - 2164891 GGAATG i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1524639 6 - 1813869 GGAATG i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10967603 1070 - 12073884 I e saiBol1.JH378287 1313369 0 - 2905041 C e dasNov3.JH569188 592871 1337 + 760995 I e colAng1.NW_012114488v1 15629144 1919 - 23502949 I e canFam3.chr1 56193179 0 + 122678785 C e cerAty1.NW_012002071v1 1418348 141 + 3144229 T e manLeu1.NW_012106474v1 8240373 0 - 10857215 C e macFas5.chr4 169099994 157 - 170955103 T a score=143293.000000 s hg38.chr6_KB021644v2_alt 126901 19 + 185823 AGACATCACACAGCTCAGC s panTro5.chr6 173583225 19 + 175400573 AGACATCACACAGCTCAGC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171816797 19 + 173848474 AGACATCACACAGCTCAGC i panPan2.chr6 C 0 T 159 s gorGor5.CYUI01015032v1 11499522 19 - 12463322 AGACATGACACAGCTCAGC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156327978 19 + 157873769 AGGCATCACACAGCTCAAC i nomLeu3.chr3 T 79 C 0 s rheMac8.chr4 170354563 19 + 172585720 AGACATCACACAGCTCAGC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169099837 19 - 170955103 AGACATCACACAGCTCAGC i macFas5.chr4 T 157 C 0 s macNem1.NW_012011000v1 8386422 19 + 10161646 AGACATCACACAGCTCAGC i macNem1.NW_012011000v1 T 79 C 0 s cerAty1.NW_012002071v1 1418207 19 + 3144229 AGACATCACACAGCTCAGC i cerAty1.NW_012002071v1 T 141 C 0 s chlSab2.chr13 96704448 19 + 98384682 AGACATCACACAGCTCAGC i chlSab2.chr13 T 79 C 0 s manLeu1.NW_012106474v1 8240373 19 - 10857215 AGACATCACACAGCTCAGC i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169910546 17 + 171630274 AGACA--ACACAACTCAGC i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1276189 19 - 2164891 AGATACCACACAGCTCAGC i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1524645 19 - 1813869 AGACACCACACAGCTTAGC i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10967603 1070 - 12073884 I e saiBol1.JH378287 1313369 0 - 2905041 C e dasNov3.JH569188 592871 1337 + 760995 I e colAng1.NW_012114488v1 15629144 1919 - 23502949 I e canFam3.chr1 56193179 0 + 122678785 C a score=169481.000000 s hg38.chr6_KB021644v2_alt 126920 32 + 185823 GTTCAGGAGGCGGGGCAGCCCAAGACTCAGGC s panTro5.chr6 173583244 32 + 175400573 GTCCAGGAGGCGGGGCAGCCCAAGACTCAGGC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171816657 32 + 173848474 GTCCAGGAGGCGGGGCAGCCCAAAACTTAGGC i panPan2.chr6 T 159 C 0 s gorGor5.CYUI01015032v1 11499541 31 - 12463322 GTCCAGGAGGC-GGGCAGCCCGAGACTCAAGC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156327997 32 + 157873769 GTCCAGGAGGCGGGGCAGCCCGAGACTCAGGC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170354582 32 + 172585720 GTCCAGGAGGCGGGGCAGCCCGAGACTCAGGC i rheMac8.chr4 C 0 T 76 s macFas5.chr4 169099856 32 - 170955103 GTCCAGGAGGCGGGGCAGCCCGAGACTCAGGC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8386441 32 + 10161646 GTCCAGGAGGCGGGGCAGCCCGAGACTCAGGC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1418226 32 + 3144229 TTCTAGGAGGCGGGGCAGCCCGAGACTCAGGC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96704467 32 + 98384682 GTCCAGGAGGCGGTGCAGCCCGAGACTCAGGC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8240392 12 - 10857215 GTCCAGGAGGCG-------------------- i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169910563 32 + 171630274 TTCCAGGAGGGGAGGCTGTGAAGGACTCAGGC i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1276208 31 - 2164891 CTCCAGGAGGGGA-GCGGTGAAGGACTCAGGC i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1524664 32 - 1813869 TTCCAGGACGGGGGGCAGTGAAGGACTCAGGC i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10967603 1070 - 12073884 I e saiBol1.JH378287 1313369 0 - 2905041 C e dasNov3.JH569188 592871 1337 + 760995 I e colAng1.NW_012114488v1 15629144 1919 - 23502949 I e canFam3.chr1 56193179 0 + 122678785 C a score=18612.000000 s hg38.chr6_KB021644v2_alt 126952 3 + 185823 TCA s panTro5.chr6 173583276 3 + 175400573 TCA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171816689 3 + 173848474 TCA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11499572 3 - 12463322 TCA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156328029 3 + 157873769 TCA i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169099888 3 - 170955103 TCA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8386473 3 + 10161646 TCA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1418258 3 + 3144229 TCA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96704499 3 + 98384682 TCA i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169910595 3 + 171630274 TCA i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1276239 3 - 2164891 TCA i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1524696 3 - 1813869 TCA i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10967603 1070 - 12073884 I e saiBol1.JH378287 1313369 0 - 2905041 C e dasNov3.JH569188 592871 1337 + 760995 I e colAng1.NW_012114488v1 15629144 1919 - 23502949 I e canFam3.chr1 56193179 0 + 122678785 C e manLeu1.NW_012106474v1 8240404 0 - 10857215 C e rheMac8.chr4 170354614 76 + 172585720 T a score=158327.000000 s hg38.chr6_KB021644v2_alt 126955 25 + 185823 GGTTTTCCACCTGGATCTCAGAAAG s panTro5.chr6 173583279 25 + 175400573 GGTTTTCCACCTGGATCTTGGAAAG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171816692 25 + 173848474 GGTTTTCCACCTGGATCTGGGAATG i panPan2.chr6 C 0 I 1 s gorGor5.CYUI01015032v1 11499575 25 - 12463322 GGTTTTCCACCTGGATCTTGGAAAG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156328032 25 + 157873769 GGTTTTCCACCTGGATCTAGGAATG i nomLeu3.chr3 C 0 T 158 s rheMac8.chr4 170354538 25 + 172585720 GGTTTTCCACCTGGATCTGGGAAGG i rheMac8.chr4 T 76 C 0 s macFas5.chr4 169099891 25 - 170955103 GGTTTTCCACCTGGATCTGGGAATG i macFas5.chr4 C 0 T 56 s macNem1.NW_012011000v1 8386476 25 + 10161646 GGTTTTCCACCTGGATCTGGGAATG i macNem1.NW_012011000v1 C 0 T 56 s cerAty1.NW_012002071v1 1418261 25 + 3144229 GGTTTTCCACCTGGATCTGGGAATG i cerAty1.NW_012002071v1 C 0 T 78 s chlSab2.chr13 96704502 25 + 98384682 GGTTTTCCACCTGGATCTGGGAATG i chlSab2.chr13 C 0 T 56 s calJac3.chr4 169910598 25 + 171630274 GGCTCTCCACCTGGATCTGGGAATG i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1276242 25 - 2164891 GGTTCTCCACCCAGATCTGGGAATG i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1524699 25 - 1813869 GGTTCTCCACCTGTATCTGGGAATG i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10967603 1070 - 12073884 I e saiBol1.JH378287 1313369 0 - 2905041 C e dasNov3.JH569188 592871 1337 + 760995 I e colAng1.NW_012114488v1 15629144 1919 - 23502949 I e canFam3.chr1 56193179 0 + 122678785 C e manLeu1.NW_012106474v1 8240404 0 - 10857215 C a score=1050.000000 s hg38.chr6_KB021644v2_alt 126980 1 + 185823 A s panTro5.chr6 173583304 1 + 175400573 A i panTro5.chr6 C 0 C 0 s panPan2.chr6 171816718 1 + 173848474 A i panPan2.chr6 I 1 C 0 s gorGor5.CYUI01015032v1 11499600 1 - 12463322 A i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170354563 1 + 172585720 A i rheMac8.chr4 C 0 C 0 s calJac3.chr4 169910623 1 + 171630274 A i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1276267 1 - 2164891 A i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1524724 1 - 1813869 T i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10967603 1070 - 12073884 I e saiBol1.JH378287 1313369 0 - 2905041 C e dasNov3.JH569188 592871 1337 + 760995 I e colAng1.NW_012114488v1 15629144 1919 - 23502949 I e canFam3.chr1 56193179 0 + 122678785 C e chlSab2.chr13 96704527 56 + 98384682 T e cerAty1.NW_012002071v1 1418286 78 + 3144229 T e nomLeu3.chr3 156328057 158 + 157873769 T e manLeu1.NW_012106474v1 8240404 0 - 10857215 C e macNem1.NW_012011000v1 8386501 56 + 10161646 T e macFas5.chr4 169099916 56 - 170955103 T a score=69568.000000 s hg38.chr6_KB021644v2_alt 126981 22 + 185823 GACATCACACAGCTCAGCTTCT s panTro5.chr6 173583305 22 + 175400573 GACATCACACAGCTCAGCATCC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171816719 22 + 173848474 GACATCACAGAGCTCAGCGTTC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11499601 22 - 12463322 GACATCACACAGCTCAGCATCC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156327899 22 + 157873769 GGCATCACACAGCTCAGCTTCT i nomLeu3.chr3 T 158 C 0 s rheMac8.chr4 170354564 22 + 172585720 GACATCACACAGCTCAGCGTCC i rheMac8.chr4 C 0 C 0 s cerAty1.NW_012002071v1 1418208 22 + 3144229 GACATCACACAGCTCAGCTTCT i cerAty1.NW_012002071v1 T 78 C 0 s calJac3.chr4 169910624 20 + 171630274 GACA--ATACAACTCAGCTTCC i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1276268 22 - 2164891 GACACCACACAGCTCAGCTGCT i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1524725 22 - 1813869 GACACCACACAGCTCAGCCTCC i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10967603 1070 - 12073884 I e saiBol1.JH378287 1313369 0 - 2905041 C e dasNov3.JH569188 592871 1337 + 760995 I e colAng1.NW_012114488v1 15629144 1919 - 23502949 I e canFam3.chr1 56193179 0 + 122678785 C e chlSab2.chr13 96704527 56 + 98384682 T e manLeu1.NW_012106474v1 8240404 0 - 10857215 C e macNem1.NW_012011000v1 8386501 56 + 10161646 T e macFas5.chr4 169099916 56 - 170955103 T a score=46958.000000 s hg38.chr6_KB021644v2_alt 127003 7 + 185823 AGGAGGC s panTro5.chr6 173583327 7 + 175400573 AGGAGGC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171816741 7 + 173848474 AGGAGGC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11499623 7 - 12463322 AGGAGGC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156327921 7 + 157873769 AGGAGGC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170354586 7 + 172585720 AGGAGGC i rheMac8.chr4 C 0 I 28 s macFas5.chr4 169099860 7 - 170955103 AGGAGGC i macFas5.chr4 T 56 C 0 s macNem1.NW_012011000v1 8386445 7 + 10161646 AGGAGGC i macNem1.NW_012011000v1 T 56 C 0 s cerAty1.NW_012002071v1 1418230 7 + 3144229 AGGAGGC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96704471 7 + 98384682 AGGAGGC i chlSab2.chr13 T 56 C 0 s calJac3.chr4 169910644 7 + 171630274 AGGAGGG i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1276290 7 - 2164891 AGGAGGG i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1524747 7 - 1813869 AGGAGGT i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10967603 1070 - 12073884 I e saiBol1.JH378287 1313369 0 - 2905041 C e dasNov3.JH569188 592871 1337 + 760995 I e colAng1.NW_012114488v1 15629144 1919 - 23502949 I e canFam3.chr1 56193179 0 + 122678785 C e manLeu1.NW_012106474v1 8240404 0 - 10857215 C a score=362754.000000 s hg38.chr6_KB021644v2_alt 127010 49 + 185823 AGGGCAGCCCGAGACTCAGGCTCAGGTTTTCCACCTGGATCTGGGAATG s panTro5.chr6 173583334 49 + 175400573 GAGGCAACCCGAGACTCAGGCTCAGGTTTTCCACCTGGATCTGGGAATG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171816748 49 + 173848474 GGGGCAGCCCGAGACTCAGGCTCAGGTTTTCCACCTGGATCTTGGAAAG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11499630 49 - 12463322 GAGGCAACCCAAGACTCAGGCTCAGGTTTTCCACCTGGATCTGGGAATG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156327928 49 + 157873769 GGGGCAGCCCGAGACTCAGGCTCAGGTTTTCCACCTGGATCTGGGAATG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170354621 49 + 172585720 AGGGCAGCCCGAGACTCAGGCTCAGGTTTTCCACCTGGATCTGGGAATG i rheMac8.chr4 I 28 C 0 s macFas5.chr4 169099867 49 - 170955103 GGGGCAGCCCGAGACTCAGGCTCAGGTTTTCCACCTGGATCTGGGAATG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8386452 49 + 10161646 GGGGCAGCCCGAGACTCAGGCTCAGGTTTTCCACCTGGATCTGGGAATG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1418237 49 + 3144229 GGGGCAGCCCGAGACTCAGGCTCAGGTTTTCCACCTGGATCTGGGAATG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96704478 49 + 98384682 GGTGCAGCCCGAGACTCAGGCTCAGGTTTTCCACCTGGATCTGGGAATG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8240404 48 - 10857215 -GGGCAGCCCGAGACTCAGGCTCAGGTTTTCCACCTGGATCTGGGAATG i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169910651 49 + 171630274 GAGGCTGTGAAGGACTCAGGCTCAGGCTCTCCACCTGGATCTGGGAATG i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1276297 49 - 2164891 GAGGCAATGAAGGACTCAGGCTCAGGCTCTCCATCTGGATCTGGGAATG i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1524754 49 - 1813869 GAGTCAGTGAGGGAGTCAGGCTCAGGTTCTCCACCTGGATCTGGGAATG i aotNan1.NW_018494782v1 C 0 I 83 e otoGar3.GL873575 10967603 1070 - 12073884 I e saiBol1.JH378287 1313369 0 - 2905041 C e dasNov3.JH569188 592871 1337 + 760995 I e colAng1.NW_012114488v1 15629144 1919 - 23502949 I e canFam3.chr1 56193179 0 + 122678785 C a score=29955.000000 s hg38.chr6_KB021644v2_alt 127059 5 + 185823 AAGAC s panTro5.chr6 173583383 5 + 175400573 AAGAC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171816797 4 + 173848474 -AGAC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11499679 5 - 12463322 AAGAC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156327977 5 + 157873769 AAGGC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170354670 5 + 172585720 AAGAC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169099916 5 - 170955103 AAGAC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8386501 5 + 10161646 AAGAC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1418286 5 + 3144229 AAGAC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96704527 5 + 98384682 AAGAC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8240452 5 - 10857215 AAGAC i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169910700 4 + 171630274 -AGAC i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1276346 4 - 2164891 -AGAT i cebCap1.NW_016107695v1 C 0 C 0 e otoGar3.GL873575 10967603 1070 - 12073884 I e saiBol1.JH378287 1313369 0 - 2905041 C e aotNan1.NW_018494782v1 1524803 83 - 1813869 I e dasNov3.JH569188 592871 1337 + 760995 I e colAng1.NW_012114488v1 15629144 1919 - 23502949 I e canFam3.chr1 56193179 0 + 122678785 C a score=1103.000000 s hg38.chr6_KB021644v2_alt 127064 4 + 185823 ATGA- s panTro5.chr6 173583388 4 + 175400573 ATGA- i panTro5.chr6 C 0 C 0 s panPan2.chr6 171816801 4 + 173848474 ATCA- i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11499684 4 - 12463322 ATGA- i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156327982 4 + 157873769 ATCA- i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170354675 4 + 172585720 ATCA- i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169099921 4 - 170955103 ATCA- i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8386506 4 + 10161646 ATCA- i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1418291 4 + 3144229 ATCA- i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96704532 4 + 98384682 ATCA- i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8240457 4 - 10857215 ATCA- i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169910704 2 + 171630274 ---AA i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1276350 2 - 2164891 ---AC i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1524886 2 - 1813869 ---AC i aotNan1.NW_018494782v1 I 83 C 0 e otoGar3.GL873575 10967603 1070 - 12073884 I e saiBol1.JH378287 1313369 0 - 2905041 C e dasNov3.JH569188 592871 1337 + 760995 I e colAng1.NW_012114488v1 15629144 1919 - 23502949 I e canFam3.chr1 56193179 0 + 122678785 C a score=20055.000000 s hg38.chr6_KB021644v2_alt 127068 2 + 185823 CA s panTro5.chr6 173583392 2 + 175400573 CA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171816805 2 + 173848474 CA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11499688 2 - 12463322 CA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156327986 2 + 157873769 CA i nomLeu3.chr3 C 0 I 80 s rheMac8.chr4 170354679 2 + 172585720 CA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169099925 2 - 170955103 CA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8386510 2 + 10161646 CA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1418295 2 + 3144229 CA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96704536 2 + 98384682 CA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8240461 2 - 10857215 CA i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169910706 2 + 171630274 CA i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1313369 2 - 2905041 CA i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1276352 2 - 2164891 CA i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1524888 2 - 1813869 CA i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10967603 1070 - 12073884 I e dasNov3.JH569188 592871 1337 + 760995 I e colAng1.NW_012114488v1 15629144 1919 - 23502949 I e canFam3.chr1 56193179 0 + 122678785 C a score=86922.000000 s hg38.chr6_KB021644v2_alt 127070 9 + 185823 CAGCTCAGC s panTro5.chr6 173583394 9 + 175400573 CAGCTCAGC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171816807 9 + 173848474 CAGCTCAGC i panPan2.chr6 C 0 M 191 s gorGor5.CYUI01015032v1 11499690 9 - 12463322 CAGCTCAGC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156328068 9 + 157873769 CAGCTCAGC i nomLeu3.chr3 I 80 C 0 s rheMac8.chr4 170354681 9 + 172585720 CAGCTCAGC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169099927 9 - 170955103 CAGCTCAGC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8386512 9 + 10161646 CAGCTCAGC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1418297 9 + 3144229 CAGCTCAGC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96704538 9 + 98384682 CAGCTCAGC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8240463 9 - 10857215 CAGCTCAGC i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169910708 9 + 171630274 CAACTCAGC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1313371 9 - 2905041 CAGCTcagc i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1276354 9 - 2164891 CAACTCAGC i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1524890 9 - 1813869 CAactcagc i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10967603 1070 - 12073884 I e dasNov3.JH569188 592871 1337 + 760995 I e colAng1.NW_012114488v1 15629144 1919 - 23502949 I e canFam3.chr1 56193179 0 + 122678785 C a score=37574.000000 s hg38.chr6_KB021644v2_alt 127079 6 + 185823 gtccag s panTro5.chr6 173583403 6 + 175400573 gtccag i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11499699 6 - 12463322 gtccag i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156328077 6 + 157873769 GTCCAG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170354690 6 + 172585720 TTCTAG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169099936 6 - 170955103 TTCTAG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8386521 6 + 10161646 TTCTAG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1418306 6 + 3144229 TTCTAG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96704547 6 + 98384682 TTCTAg i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8240472 6 - 10857215 TTCTAG i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169910717 6 + 171630274 TTCCAG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1313380 6 - 2905041 ttccag i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1276363 6 - 2164891 TTCCAG i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1524899 6 - 1813869 ttccag i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10967603 1070 - 12073884 I e dasNov3.JH569188 592871 1337 + 760995 I e colAng1.NW_012114488v1 15629144 1919 - 23502949 I e canFam3.chr1 56193179 0 + 122678785 C e panPan2.chr6 171816816 191 + 173848474 M a score=125382.000000 s hg38.chr6_KB021644v2_alt 127085 21 + 185823 gaggcagggcagcccgggacg s panTro5.chr6 173583409 21 + 175400573 gaggcagggcagcccgggacg i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11499705 21 - 12463322 gaggcagggcagcccgggacg i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156328083 21 + 157873769 GAGGCGGGGCAGCCTGGGACG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170354696 21 + 172585720 GAGGGGGGGCAGCCCGGGACA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169099942 21 - 170955103 GAGGGGGGGCAGCCCGGGACG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8386527 21 + 10161646 GAGGGGGGGCAGCCCGGGACG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1418312 21 + 3144229 GAGGGGGGGCagcccgggacg i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96704553 21 + 98384682 gaggcagggtagcccagcaag i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8240478 21 - 10857215 Gagtgggggcagcctgggacg i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169910723 20 + 171630274 GAGGCGGGTCAGCC-Gggact i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1313386 20 - 2905041 gaggcagggcagcc-gggact i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1276369 20 - 2164891 GAGGCAGGGCAGCT-Gggact i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1524905 20 - 1813869 gaggcagggcagcc-gggact i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10968673 17 - 12073884 GAGGGAGGGGATCC----ACC i otoGar3.GL873575 I 1070 C 0 e dasNov3.JH569188 592871 1337 + 760995 I e colAng1.NW_012114488v1 15629144 1919 - 23502949 I e canFam3.chr1 56193179 0 + 122678785 C e panPan2.chr6 171816816 191 + 173848474 M a score=416309.000000 s hg38.chr6_KB021644v2_alt 127106 53 + 185823 tgggctcaggttttctgagctcatctacttggtctctcctcactcactgtatg s panTro5.chr6 173583430 53 + 175400573 tgggctcaggttttctgagctcatctacctggtctctcctcactcactgtatg i panTro5.chr6 C 0 C 0 s panPan2.chr6 171817011 53 + 173848474 tgggctcaggttttctgagatcatctacctggtctctcctcactcactgtatg i panPan2.chr6 M 191 C 0 s gorGor5.CYUI01015032v1 11499726 53 - 12463322 tgggctcaggttttctgagatcatctacctggtctcttctcactcattgtatg i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156328104 51 + 157873769 TGGGTGcaggttttctgagctcacctacctggtctctcct--ctcaccctgtg i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170354717 53 + 172585720 TGCGCTcagattttctgagctcacctacctggtctctcctcactcaccatgtg i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169099963 53 - 170955103 TGCGCTcagattttctgagctcacctacctggtctctcctcactcaccatgtg i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8386548 53 + 10161646 TGCGCTcagattttctgagctcacctacctggtctctcctcactcaccatgtg i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1418333 53 + 3144229 tgggctcagattttctgagctcacctacctggtctctcctcactcaccatgtg i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96704574 53 + 98384682 tgggctcagattttctgagctcagctacctggtctcttctcactcactatgtg i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8240499 53 - 10857215 tgggctcagattttctgagctcacctacctggtctctcctcactcaccatgtg i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169910743 52 + 171630274 tggactcaggctttttgagctca-ccgcctggtgtctcctcactcacgatgtg i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1313406 52 - 2905041 cggactcaggttttctgagctca-ccgcctggtgtctcctcactcaccatgtg i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1276389 52 - 2164891 cagactcaggttttctgagctca-ctgcctggtgtctcctcactcaccgtgtg i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1524925 52 - 1813869 tggactcaagttttctgagctca-ccgcctggtgtctcctcactcaccatgtg i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10968690 50 - 12073884 GGGGCTCCAG-TCTCTGAACTTCCCTGTCTCATC-CTCCTCACCCTCC-TGTG i otoGar3.GL873575 C 0 C 0 e dasNov3.JH569188 592871 1337 + 760995 I e colAng1.NW_012114488v1 15629144 1919 - 23502949 I e canFam3.chr1 56193179 0 + 122678785 C a score=880379.000000 s hg38.chr6_KB021644v2_alt 127159 113 + 185823 acctcaggtaacttcctgagtgtcttcatgcct---cagtttctccgtgtgc------aataggag------------ttttgtgaagattaattgaattaataactatgtcgggacaaatgtatcagctcctg s panTro5.chr6 173583483 113 + 175400573 acctcaggtaacttcctgagtgtcttcatgcct---cagtttccccgtgtgc------aataggag------------ttttgtgaagattaattgaattaataactatgtcgggacaaatgtatcagctcctg i panTro5.chr6 C 0 C 0 s panPan2.chr6 171817064 113 + 173848474 acctcaggtaacttcctgagtgtcttcatgcct---cagtttccccgtgtgc------aataggag------------ttttgtgaagattaattgaattaataactatgtcgggacaaatgtatcagctcctg i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11499779 113 - 12463322 acctcaggtaacttcctgagtgtcttcatgcct---cagttttcccgtgtgc------aataggag------------ttttgtgaagattaattgaattaataactatgtcgggacaaatgtatcagctcctg i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156328155 113 + 157873769 acctcaggtaacttcctgagtgtcttcatgcct---cagtttccccatgtgc------aaTAGGAG------------TTTTGTGAAGATTAATTGCATTAATAACTACGTTGGGACAAATGTATCAGCTCCTG i nomLeu3.chr3 C 0 M 1058 s rheMac8.chr4 170354770 112 + 172585720 agcccaggtaacttcctgaatgccttcatgcct---cagtttccccatgtgc------aaTAGGAG------------TTTTGTGAAGACTAATTGAA-TAATAACTATGTCGGAACAAATGTATCAGCTCTTG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169100016 112 - 170955103 agcccaggtaacttcctgaatgtcttcatgcct---cagtttccccatgtgc------aaTAGGAG------------TTTTGTGAAGACTAATTGAA-TAATAACTATGTCGGAACAAATGTATCAGCTCTTG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8386601 112 + 10161646 agcccaggtaacttcctgaatgtcttcatgcct---cagtttccccatgtgc------aaTAGGAG------------TTTTGTGAAGACTAATTGAA-TAATAACTATGTCGGAACAAATGTATCAGCTCTTG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1418386 112 + 3144229 agcccaggtaacttcctgaatgtcttcatgcct---cagtttccccatgtgc------aaTAGGAG------------TTTTGTGAAGACTAATTGAA-TAATAACTATGTTGGTAAAAATGTATCAAGCTCTT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96704627 112 + 98384682 acctcaggtaacttcctgaatgtcttcatgcct---cagtttccccatgtgc------aaTAGGAG------------TTTTGTGACGACTAATTGAA-TAATAACTGTGTCGAAACAAATGTATCAGCTCTTG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8240552 112 - 10857215 agcccaggtaacttcctgaatgtcttcatgcct---cagtttccccatgtgc------aaTAGGAG------------TTTTGTGAAGACTAATTGAA-TAATAACTATGTCGGAACAAATGTATCAGCTCTTG i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169910795 107 + 171630274 acctcagttaacttcctgaatggcttcatgcct---cagtttcctgaagggc-----aaataggag------------ttttgtgaagattaattgaattaataaatgtGTGAGGACAAAAGTATCA------- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1313458 106 - 2905041 acctcaggtaacttcctgaatggcttcatgcct---cattttcc-aaagtgc-----aaataggag------------ttttgtgaagattaattgcattaataaatgtgtcaggacgaatgtatca------- i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1276441 106 - 2164891 acctcaggtaacttcctgaatggcttcatgcct---cattttcc-aaagtgc-----aaataggag------------ttttgtgaagattaattgaattaataaatgtGTCAGGACAAATGTATCA------- i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1524977 107 - 1813869 acctcaggtaacttcctgaatggcttcatgcct---cagtttcccaaagtac-----aaataggag------------tttagtgaagattaattgaattaatagatgtGTCAGGACAAATGTATCA------- i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10968740 106 - 12073884 ACCTCAGGTACCTGCCTGTGTGTCTCCCTGCTTTGATAGTTCCCTCACGTGC-----AAGCAGGAG------------TTC--TTGAGACTAATCAGGCTAACAAATGTATCTGGACAGC--TCTCA------- i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56193179 111 + 122678785 ACCTGCCGTAGCTTCCCAAACACCTTCATGCCC---TGGTGACCTCACGAGCGAGTGGAACAGGAATGACAGCCGGGTTCTCGTGCGGATTGAGTTGA-----------GACAGGACAG--GGCTTA------- i canFam3.chr1 C 0 C 0 e dasNov3.JH569188 592871 1337 + 760995 I e colAng1.NW_012114488v1 15629144 1919 - 23502949 I a score=777747.000000 s hg38.chr6_KB021644v2_alt 127272 125 + 185823 gcacttggtaaTATAA-GCCATGACTCTT-CACTGTTGTTATCATTTGATATTTGAGCTTAATGCCAAAAGTTTCTCCGGAGGAAGGTGCAGCTCTCTCGAAGGCGCTGAGC-TCCAGC--AGGGAATGT---- s panTro5.chr6 173583596 125 + 175400573 gcacttggtaaTATAA-GCCATGACTCTT-CACTGTTGTTATCATTTCATATTTGAGCTTAATGCCAAAAGTTTCTCCGGAGGAAGGTGCAGCTTTCTCGAAGGCACTGAGC-TCCAGC--AGGGAATGT---- i panTro5.chr6 C 0 C 0 s panPan2.chr6 171817177 125 + 173848474 gcacttggtaaTATAA-GCCATGACTCTT-CACTGTTGTTATCATTTGAAATTTGAGCTCAATGACAAAAGTTTCTCCGGAGGAAGGTGCAGCTCTCTCGAAGGCGCTGAGC-TCCAGC--AGGGAATGT---- i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11499892 125 - 12463322 gcacttggtaaTATAA-GCCATGACTCTT-CACTGTTGTTATCATTTGATATTTGAGCTTAATGCCAAAAGTTTCTCCGGAGGAAGGTGCAGCTCTCTCGAAGGCGCTGAGC-TCCTGC--AGGGAATGT---- i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170354882 125 + 172585720 GCACTTGGTGATGTAA-ACCATGACTCTT-CACTGTTGTTATCATTTGATACTTGAGCTTATTGCCAAAGGTTTCTCTGCAGGAAGGTACAGCTCTCTCGAAGGCACTGAGC-TCCGTT--GGGGAACGT---- i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169100128 125 - 170955103 GCACTTGGTGATGTAA-ACCATGACTCTT-CACTGTTGTTATCATTTGATACTTGAGCTTATTGCCAAAGGTTTCTCTGCAGGAAGGTACAGCTCTCTGGAAGGCACTGAGC-TCCGTT--GGGGAACAT---- i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8386713 125 + 10161646 GCACTTGGTGATGTAA-ACCATGACTCTT-CACTGTTGTTATCATTTGATACTTGAGCTTATTGCCAAAGGTTTCTCTGCAGGAAGGTACAGCTCTCTCGAAGGCACTGAGC-TCCGTT--GGGGAACGT---- i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1418498 127 + 3144229 GCACTT-GTGATGTAAGGCCATGAGTCTT-CATGTTGATTATCTTTGAATACTTGAGCTTATTGCCAAGGG-TTCTCTGCAGGAAGGTGCAGCTCTCTCGAAGGCACTGAGCTTCCGTTAAGGAGAACGT---- i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96704739 125 + 98384682 GCACTTGGTGATGTAA-ACCATGACTCTT-CACTGTTGTTACCATTTGATACTTGAGCTTATTACCAAAGGTCTCTCTGTAGGAAGGTGCAGCTCTCTCGAAGGTACTGAGC-TCCGCT--GGGGAACGT---- i chlSab2.chr13 C 0 I 106 s manLeu1.NW_012106474v1 8240664 125 - 10857215 GCACTTGGTGATGTAA-ACCATGACTCTT-CACTGTTGTTATCATTTGATACCTGAGCTTATTGCCAAAGGTTTCTCTGCAGGAAGGTACAGCCCTCTCGAAGGCACTGAGC-TCCCTT--GGGTAACGT---- i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169910902 124 + 171630274 GCACTTGGTACTATAG-GCCATAACTTTT-CACTGTTGTTATCATTTCATACTTGAGGTCACTGCTAAAGGTTCCTCCGTGTGAAGGTGCCGCTCTCTCAAAGGCGCTGAGC-T-CCGC--GGGGAACGT---- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1313564 124 - 2905041 gcgcttggtactataa-gccataactttt-cactgttgttatcattTCATACCTGAGGTCATCGCTAAAGGTTCCTCCGTGCGAAGGTGCTGCTCTCTCAAAGGTGCTGAGC-T-CGGC--GCGGAATGT---- i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1276547 124 - 2164891 GCACTTGGTACTATAA-GCCATACCTTTT-CACTGTTGTTACCATTTCATACTTGAGGTCATCGCTAAAGGTTCTTCCGTGCGAAGGTGCTGCTCTCTCAAAGGCACTGAGC-T-CAGT--GGGGAACGT---- i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1525084 122 - 1813869 GCACTTGGTACCATAA-GCCATAACTTT---ACTGTTGTTATCATTTCATACTTGAGGTCATTGCTAAAGGTTCCTCCGTGCGAAGGTGCTGCTCTCTCAAAGGCACTGAGC-T-CGGC--AGGGAACGC---- i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10968846 105 - 12073884 GCCCATGGTAAT---A-AGCACGCATTTT-AGCTGTTATTAGTGCTTTGTAGTTGAGTTTAGCACCAAAGACTCTTCAGAAGAGAGGAG-----------------CTGGAC-CCCAGC--AGAGGAAGG---- i otoGar3.GL873575 C 0 I 1 s canFam3.chr1 56193290 114 + 122678785 GCACATGGTAA-GGAA-TCCACCAGTCGTACATT----TTACTGTTTGACGCTTGAGTTTAGTACCGAAGCTCTTGCAAGAGGA-----------CCTTGAGGTTGTTGGTC-TTAGGT--GGTGGTGGGGTTC i canFam3.chr1 C 0 C 0 e dasNov3.JH569188 592871 1337 + 760995 I e colAng1.NW_012114488v1 15629144 1919 - 23502949 I e nomLeu3.chr3 156328268 1058 + 157873769 M a score=409604.000000 s hg38.chr6_KB021644v2_alt 127397 74 + 185823 ACATCCCAACTCATAATTTCCTTCAATGTT-AAAACATGA-GCC-AGTTG--CCTGTGACT----T-------TATTCCT--TTCGTGCATT----- s panTro5.chr6 173583721 75 + 175400573 ACATCCCAACTCATAATTTTCTTCAATGTTAAAAAAATGA-GCC-AGTTG--CCTGTGACT----T-------TATTCCT--TTCGTGCATT----- i panTro5.chr6 C 0 C 0 s panPan2.chr6 171817302 74 + 173848474 ACATCCCAACTCATAATTTCCTTCAATGTT-AAAAAATGA-GCC-AGTTG--CCTGTGACT----T-------TATTCCT--TTCATGCATT----- i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11500017 74 - 12463322 ACATCCCAACTCATAATTTCCTTCAGTGTT-AAAACATGA-GCC-AGTTG--CCTGTGACT----T-------TATTCCT--TTCGTGCATT----- i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170355007 74 + 172585720 ACTTCCCAACTCATAATTTCCTTCAACGTT-AAAACGTGA-GCC-AGTTG--CCTGTGACT----T-------TATTCCT--TTCATGCATT----- i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169100253 74 - 170955103 ACTTCCCAACTCATAATTTCCTTCAATGTT-AAAACGTGA-GCC-AGTTG--CCTGTGACT----T-------TATTCCT--TTCATGCATT----- i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8386838 74 + 10161646 ACTTCCCGACTCATAATTTCCTTCAATGTT-AAAACGTGA-GCC-AGTTG--CCTGTGACT----T-------TATTCCT--TTCATGCATT----- i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1418625 81 + 3144229 ACTT-CCATCTCATAATTTCCTTCCAATGT-AAAACGTGGCGCCGAGTTTGCCCTGTGACTGGCGT-------TATTCCCTGTTCATGCG------- i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96704970 74 + 98384682 ACTTCCCAACTCATCATTTCCTTCAGCGTT-AAAACGCGA-GCC-AGTTG--CCTGTGACT----T-------TATTCCT--TTCATGCATT----- i chlSab2.chr13 I 106 C 0 s manLeu1.NW_012106474v1 8240789 74 - 10857215 ACTTCCCGACTCATAATTTCCTTCAGCGTT-AAAACGTGA-GCC-AGTTG--CCTGTGACT----T-------TATTCCT--TTCATGCATT----- i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169911026 81 + 171630274 ACCTCCCAACTCGGAATTCCCTTCAGTGTT-ACAACGTGA-CCC-AGTGG--CCTATGGCC----TCCTTCGGCCTTCCT--TTCATGCGTT----- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1313688 81 - 2905041 ACCTCCCAACTCGCAATTCCCTTCAGTGTT-AAAACGTGA-CCC-AGTGG--CCTTTGGCC----GCCTTCTGCCTTCCT--TTCATGCGTT----- i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1276671 81 - 2164891 ACCTCCCAACTCGTAAATCCCTTCAGTGTT-AAAACATGA-CCT-AGTGG--CCTGTGGCC----TCCTTCTGCCTTCCT--TTCATGTGTT----- i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1525206 81 - 1813869 ACCTCCCAACTCGTAATTTCCTTCAGTGTT-AAAACGTGA-CCC-AGTGG--CCTATGGCT----TCCTTCTGCCTTCCT--TTCATGCGTT----- i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10968952 66 - 12073884 -ACTGCCTCGTCCTAATCTCTACC-----C-----------ATC-AGTTG--CATTCAACA----TTATCCTACCTGCCT--TCAGTGCATG----- i otoGar3.GL873575 I 1 C 0 s canFam3.chr1 56193404 78 + 122678785 ACTTCCCAAATCACAA-TCCCTGCAACACT-AGTACGTGG-ATC-GTGCA--TGTGTGAAT----A-------CACACCT--CACTTCTAATGAAGC i canFam3.chr1 C 0 C 0 e dasNov3.JH569188 592871 1337 + 760995 I e colAng1.NW_012114488v1 15629144 1919 - 23502949 I e nomLeu3.chr3 156328268 1058 + 157873769 M a score=1685485.000000 s hg38.chr6_KB021644v2_alt 127471 216 + 185823 CGTGAGTTTACTATCAAGGAAATACAGGTAAGCT-CTTCACGTTTA--TGTTTTCACACTCTT-AAAGGCAACT-CTGATTCTG-ATGTTTTAGGCTTT----AGTCC-ATGTT-TATC-CTGTCTTC-TAATTGTTCTAATT-TTAT-GCATGTC-TATAATA-GTtgtcttatgtttctaa-attactttttatctttttatgttttatAGCTATACCCTT--TT-TCATGATTTT- s panTro5.chr6 173583796 215 + 175400573 CGTGAGTTTACTATCAAGGAAATACAGGTAAGCT-CTTCACGTTTA--TGTTTCCACACTCTT-AAAGGCAACT-CCGATTCTG-ATGTTTCAGGCTTT----AGTTC-ATGTT-TATC-CTGTCTTC-TAATTGTTCTAATT-TTAT-GCATGTC-TATAATA-GTtgtcttatgtttctaa-attaccttttatctttttatgttttatAGCTATACCCTT--TT-TCATGA-TTT- i panTro5.chr6 C 0 C 0 s panPan2.chr6 171817376 215 + 173848474 CGTGAGTTTACTATCAAGGAAATACAGGTAAGCT-CTTCACGTTTA--TGTTTCCACACTCTT-AAAGGCAACT-CCGATTCTG-ATGTTTCAGGCTTT----AGTTC-ATGTT-TATC-CTGTCTTC-TAATTGTTCTAATT-TTAT-GCATGTC-TATAATA-GTtgtcttatgtttctaa-attaccttttatctttttatgttttatAGCTATACTCTT--TT-TCATGA-TTT- i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11500091 215 - 12463322 CATGAGTTTACTATCAAGGAAATACAGGTAAGCT-CTTCACGTTTA--TGTTTGCACACTCTT-AGAGGCAACT-CCGATTCTG-ATGTTTTAGGCTTT----AGTTC-ATGTT-TATC-CTGTCTTC-TAATTGTTCTAATT-TTAT-GCATGTC-TATAATA-GTTGTCTTATGTTTCTAA-ATTACTTTTTATCTTTTTATGTTTTATAGCTATACCCTT--TT-TCATGA-TTT- i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156329326 215 + 157873769 CGCGAGTTTACTATCAAGCAAATACAGGTAAGCT-CTTCACGTTTA--TGTCTTCACACTCTT-AAAGGCAACT-CTGATTCTG-ATATTTTAGGCTTT----AGTTC-GTGTT-TATC-CTGTCTTC-TAATTGTTCTAATT-TTAT-ACACATC-TATCATA-GTtgtcttatgtttctaa-attactttttatctttttatgttttatAGCTATACCCTT--TT-TCATGA-TTT- i nomLeu3.chr3 M 1058 C 0 s rheMac8.chr4 170355081 218 + 172585720 TGTGAGTTTACT-TCAAGCAAATACAGGTAAGCT-CTTCATGTTCA--TGTTTTCACACTCTC-AAAGGCAACT-CCAATTCTG-ATATTTTAGGCTTTAGTCAGTTC-ATGTT-TATC-CTGTCTTC-AAATTGTTCTAATT-TTAT-ACATGTC-TATAATA-GTTATCTTAGGTTTCTAA-ATTACTTTTTATCTTTTTATGTTTTATAGCTATACCTTT--TT-TCATGA-TTT- i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169100327 218 - 170955103 TGTGAGTTTACT-TCAAGCAAATACAGGTAAGCT-CTTCATGTTCA--TGTTTTCACACTCTC-AAAGGCAACT-CCAATTCTG-ATATTTTAGGCTTTAGTCAGTTC-ATGTT-TATC-CTGTCTTC-AAATTGTTCTAATT-TTAT-ACATGTC-TATAATA-GTTATCTTAGGTTTCTAA-ATTACTTTTTATCTTTTTATGTTTTATAGCTATACCTTT--TT-TCATGA-TTT- i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8386912 218 + 10161646 TGTGAGTTTACT-TCAAGCAAATACAGGTAAGCT-CTTCATGTTCA--TGTTTTCACACTCTC-AAAGGCAACT-CCAATTCTG-ATATTTTAGGCTTTAGTCAGTTC-ATGTT-TATC-CTGTCTTC-AAATTGTTCTAATT-TTAT-GCATGTC-TATAATA-GTTGTCTTAGGTTTCTAA-ATTACTTTTTACCTTTTTATGTTTTATAGCTATACCTTT--TT-TCATGA-TTT- i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1418706 227 + 3144229 ---GGATTTACT-TCAAGCAAATGCAGGTAAA-T-CTTCAAGTTTATGTGTTTTCACACTCTCAAAAAGCAACTCCCAATTCTGTTTATTTTAGGCTTTAGTCAGTTCTATGTTGTATCTCTGTCTTCAAAATTGTTCTAATTGTTATGGCATGTCTTATAATACGTTGTCTTTAGGTTCTAA-ATTTACTTTTATCTTTTTATGTTTTATAGCTATACTCTT--TT-TCATGA-TTT- i cerAty1.NW_012002071v1 C 0 I 33 s chlSab2.chr13 96705044 218 + 98384682 TGTGAGTTTACT-TCTAGCAAATGCAGGTAAGCT-CTTCATGTTCA--TGTTTTCACACTCTC-AAAGGCAACT-CCGATGCTG-ATATTTTAGGCTTTAGTCAGTTC-ATGTT-TATC-CAGTCTTC-ACATTGTTCTAATT-TTAT-ACATGTC-TATAATA-GTTGTCTTAGGTTTCTAA-AGTACTTTTTATCTTTTTATGTTTTATAGCTATACATTT--TT-TCATGA-TTT- i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8240863 218 - 10857215 TGTGAGTTTACT-TCAAGCAAATACAGGTAAGCT-CTTCATGTTCA--TGTTTTCACACTCTC-AAAGGCAACT-CCAATTCTG-ATATTTTAGGCTTTAGTCAGTTC-ATGTT-TATC-CTGTCTTC-AAATTGTTCTAATT-TTAT-GCATGTC-TATAATA-GTTGTCTTAGGTTTCTAA-ATTACTTTTTATCTTTTTATGTTTTATAGCTATACCTTT--TT-TCATGA-TTT- i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169911107 219 + 171630274 CATGAGTTTACTGTGAAGCAAATACAGGTAAGTTCCTTCACGTTTC--TGTTTCCACACTCTC-AAAAGCAACT-CCGATTCTA----TTTTAGGATTTGGACAGTTC-ATGTT-TATC-TTGTCTTC-TCATTGCTCCAATT-TTGC-ACGTGTC-TATAATG-GTGGTCTTATATTTCTAA-TTTACTTTTTATCTTTTTATGTTTTATAACTATACCTTTTATT-TTAAAG-ATT- i calJac3.chr4 C 0 I 1 s saiBol1.JH378287 1313769 216 - 2905041 CATGAGTTTACTGTTAAGCAAATACAGGTAAGTT-CTTCATGTTTC--TGTTTTCACACTCTC-GAAAGCAACT-CCGATTCTA----CTTTAGGATTTGGACAGTTC-ATGTT-TGTC-TTGTCTTC-CAATTGTTCCAATT-TTGC-ACGTGTC-TATAATG-GTTGTCTTGTATTTCTAA-TTCACTTTTTATCTTTTTATGTTTTATGACTATACCTGT--TT-TTAAGG-ATT- i saiBol1.JH378287 C 0 I 1 s cebCap1.NW_016107695v1 1276752 216 - 2164891 CATGAGTTTACTGTCAAGCAAATACAGGTAAGTT-CTTCACGTTTC--TGTTTTCACACTCTC-GAAAGCAACT-CCGATTCTA----TTTTAGGATTGGGACAGTTG-ATGTT-TATC-TTGTCTTC-TAATTGTTCCAATT-TTGC-ACGTGTC-TATAACG-GTTGTCCtatatttctaa-tttactttttatctttttatgttttataACTATACCTAT--TT-TTAAGG-ATT- i cebCap1.NW_016107695v1 C 0 I 1 s aotNan1.NW_018494782v1 1525287 216 - 1813869 CATGAGTTTACTGTCAAGCAAGTACAGGTAAGTT-CTTCAGATTTC--TGTTTTCACACTCCC-GAAAGCAACG-CCGATTCTA----TTTTAGGGTTTGGACAGTTC-ATGTT-TATC-TTGTCTTC-TAATTGTTCCAATT-TTGC-ACATGTC-TCTAATG-GTtgtcttatgtttctaa-tttactttttatctttttatgtcttatAACTATACCTTT--TT-TAAAGG-ATT- i aotNan1.NW_018494782v1 C 0 I 1 s otoGar3.GL873575 10969018 199 - 12073884 TGTGAGCTTATAATAAAGCAGATA-AAATGAGTC-CTTCTGATtta--gcttttcagactaca-aaaagcaacc-ccaattctg-atgtttcaggatttggtaaGTTC-TGGTA-TATC------TTT-AATTTTTCCCAATT-TCGT-ACATGTC-TATTACA-ATTGCCTTGTGTTTTTAA--TTGTTTTTTATCTTTTTATATTTCATAA-TATACCTT----------------- i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56193482 188 + 122678785 CATGAGTTTAAA-TCACGTGTGTATGGGTAAGTT-CTTCCAGTTTA--TAATTTCACA---------------T-CTCATTGTC-ATACTTTAGAT-------------TTGGT-Tttc-ttgtcttt-----ttttctaatt-ttat-atatctc-tgttgtg-actttgttatgcttttatttttactcttt---ttttaatgcttttccattttgtgttt--ttattATGA-TCCT i canFam3.chr1 C 0 C 0 e dasNov3.JH569188 592871 1337 + 760995 I e colAng1.NW_012114488v1 15629144 1919 - 23502949 I a score=181343.000000 s hg38.chr6_KB021644v2_alt 127687 19 + 185823 TAGTGCATT--AATGCCTGGG s panTro5.chr6 173584011 19 + 175400573 TAGTGCATT--AATGCCTGGG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171817591 19 + 173848474 TAGTGCATT--AATGCCTGGG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11500306 19 - 12463322 TAGTGCATT--AATGCCTGGG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156329541 19 + 157873769 TAGTGCATT--AATGCCTGGG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170355299 19 + 172585720 TAGTGCATT--AATGCCTGGG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169100545 19 - 170955103 TAGTGCATT--AATGCCTGGG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8387130 19 + 10161646 TAGTGCATT--AATGCCTGGG i macNem1.NW_012011000v1 C 0 C 0 s chlSab2.chr13 96705262 19 + 98384682 TAGTGCATT--AATGCCTGGG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8241081 19 - 10857215 TAGTGCATT--AATGCCTGGG i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169911327 19 + 171630274 TGGTGCATT--AATCCCTGGG i calJac3.chr4 I 1 C 0 s saiBol1.JH378287 1313986 19 - 2905041 TAGTGCGTT--AATCCCTGGG i saiBol1.JH378287 I 1 C 0 s cebCap1.NW_016107695v1 1276969 19 - 2164891 TAGTGCATT--AATCCCTGGG i cebCap1.NW_016107695v1 I 1 C 0 s aotNan1.NW_018494782v1 1525504 19 - 1813869 TAGTGCATT--AATCCCTGGG i aotNan1.NW_018494782v1 I 1 C 0 s otoGar3.GL873575 10969217 21 - 12073884 TAATGCATTAGAATCTCTGAG i otoGar3.GL873575 C 0 I 3 s canFam3.chr1 56193670 18 + 122678785 -AATGCATT--AACTCCTGGG i canFam3.chr1 C 0 C 0 e dasNov3.JH569188 592871 1337 + 760995 I e colAng1.NW_012114488v1 15629144 1919 - 23502949 I e cerAty1.NW_012002071v1 1418933 33 + 3144229 I a score=2649225.000000 s hg38.chr6_KB021644v2_alt 127706 312 + 185823 AGTGACAGCTGTTTACAATTCAAATCCCA-CATTCTGCTGCGAACTCTCCTCCTCTGTG-TCCGGAAGGTTCTATCC---ACTTTCCTTTTGTGCATTTAGTTATTGGCACTGCTCCTTCTCCCC-----------------T-AAAAGAATTCTAAGCAATTA------------------CACTTGC-TCCATTTCCCTTT-AAGGACTCGAACTCA--CTTCTCCCAGCAAGTCACACTGGCTTACTTGGTCATTG--ATCTTATGTTTTAGTCTCATTTCCGAGAACCTGCTCATCTG-CGGTTGCCTTGTGTGTGTTGGAGACCTTCTCAGAGATGGGGTCATTTTGACAAAGTC s panTro5.chr6 173584030 312 + 175400573 AGTGACAGCTGTTTACAATTCAAATCCCA-CATTCTGCTGCGAACTTTCCTCCTCTGTG-TCCGGAAGGTTCTATCC---ATTTTCCTTTTGTGCATTTAGTTATTGGCACTGCTCCTTCTCCCC-----------------T-AAAAGAATTCTAAGCAATTA------------------CATTTGC-TCCATTTCCCTTT-AAGGACTCGAACTCA--CTTCTCCCAGCGAGTCACACTGGCTTACTTGGTCATTG--ATCTTACGTTTTAGTCTCATTTCCGAGAAACTGCTCATCTG-CGGTTGCCTTGTGTGTGTTGGAGACCTTCTCAGAGATGGGGTCATTTTGACAAAGTC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171817610 312 + 173848474 AGTGACAGCTGTTTACAATTCAAATCCCA-CATTCTGCTTCAAACTCTCCTCCTCTGTG-TCCAGAAGGTTCTATCC---ACTTTCCTTTTGTGCATTTAGTTATTGGCACTGCTCCTTCTCCCC-----------------T-AAAAGAATTCTAAGCAATTA------------------CACTTGC-TCCATTTCCCTTT-AAGGACTCGAACTCA--CTTCTCCCAGCAAGTCACACTGGCTTACTTGGTCATTG--ATCTTACGTTTTAGTCTCGTTTCCGAGAACCTGCTCATGTG-CGGTTGCCTTGTGTGTGTTGGAGACCTTCTCAGAGATGGGGTCATTTTGACAAAGTC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11500325 310 - 12463322 AGTGACAGCTGTTTACAATTCAAATCCCA-CATTCTGCTGCGAACTCTCCTCCTCTGTG-TCCGGAAGGTTCTATCC---ACTTTCC-TTTGTGCATTTAGTTATTGGCACTGCTCCTTCTCCCC-----------------T-AAAAGAATTCTAAGCAATTA------------------CACTTGC-TCCATTTCCC-TT-AAGGACTCGAACTCA--CTTCTCCCAGCGAGTCACACTGGCTTACTTGGTCATTG--ATCTTACGTTTTAGTCTCATTTCCGAGAACCTGCTCCTCTG-CGGTTGCCTTGTGTGTGTTGGAGACCTTCTCAGAGATGGGGTCATTTTGACAAAGTC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156329560 312 + 157873769 AGTGACAGCTGTTTACAATTCAAATCCCA-CATTCTGCTGCGAACTCTCCTCCTCTGTG-TCTGGAAGGTTCTATCT---ACTTTCCTTTTGTGCATTTAGTTATTGGCACTGCTCTTTCTCCCC-----------------T-AAAAGAATTCTAAGCAATTA------------------CACTTGC-TCCATTTCCCTGT-GAGGACTCAAACTCA--CTTCTCCCAGCAAGTCACACTGGCTTACTTGGTCACTG--ATCTTACGTTTTAGTCTCATTTCTGAGAAACTGCTCATCTG-CGGTTGCCTTGTGTGTGTTGGAGACCTTCTCAGACATGGGGTCATTTTGACAAAGTC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170355318 315 + 172585720 AGTGACAGCTGTTTACAATTCAAATCTCA-CATTCTGCTGCGAACTCTCCTCCTCTGTG-TCCAGAAGGTTCTATCCACGACTTCCCTTTTGTGCATTTAGTTATTGGCACTGCTCTTTCTCCCC-----------------T-AAAAGAATTCTAAGCAATTA------------------GACTTGC-TTGATTTCCCTTT-AAGGACTTGAACTCA--CTTCCCCCAGCGAGTCACACTGGCTTACTTCATCATTA--ATCTTACGTTTTAGTCTCCTTTCCAAGAACCTGCTCATCTG-CAGTTGCCCTGTCTGTGTTGGAGTCCTTCTTGGAGATGGGGTCATTTTGATAAAGTC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169100564 315 - 170955103 AGTGACAGCTGTTTACAATTGAAATCTCA-CATTCTGCTGCGAACTCTCCTCCTCTGTG-TCTGGAAGGTTCTATCCACGACTTCCCTTTTGTGCATTTAGTTATTGGCACTGCTCTTTCTCCCC-----------------T-AAAAGAATTCTAAGCAATTA------------------GACTTGC-TTGATTTCCCTTT-AAGGACTTGAACTCA--CTTCCCCCAGCGAGTCACACTGGCTTACTTCGTCATTA--ATCTTACGTTTTAGTCTCCTTTCCAAGAACCTGCCCATCTG-CAGTTGCCCTGTCTGTGTTGGAGTCCTTCTTGGAGATGGGGTCATTTTGATAAAGTC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8387149 315 + 10161646 AGTGACAGCTGTTTACAATTCAAATCTCA-CATTCTGCTGCGAACTCTCCTCCTCTGTG-TCCGGAAGGTTCTATCCACGACTTCCCTTTTGTGCATTTAGTTATTGGCACTGCTCTTTCTCCCC-----------------T-AAAAGAATTCTAAGCAATTA------------------GACTTGC-TTGATTTCCCTTT-AAGGACTTGAACTCA--CTTCCCCCAGCGAGTCACACTGGCTTACTTCGTCATTA--ATCTTACGTTTTAGTCTCCTTTCCAAGAACCTGCCCATCTG-CAGTTGCCTTGTCTGTGTTGGAGTCCTTCTTGGAGATGGGGTCATTTTGATAAAGTC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1418966 320 + 3144229 AGTGAACAGCGTTTAC-ATTCATATCTCAGCATTCTGCTGCGAACTCTCCTCCTCTGTGTTCCGGAAGGTTCCATCCACGACTTCCCTTTTGTGCATTTAGTTATTGGCACTGCTCTTTCTCCCC-----------------TAAAAAGAATTCTAAGCAATTA------------------GACTTGCTTTGATTTCCCTTTAAAGGACTTGAACTCA--CTTCCCCCAGCGAGTCACACTGGCTTAC-TCGTCATTAATATCTTACGTCTTAGTCTCCTTTCCAAGAACCTGCCCATCTGCCGGTTGCCTTGTCTGTGTTGGAGTCCTTCTTGGAGACGGGGTCATTTTGAT-AAGTC i cerAty1.NW_012002071v1 I 33 C 0 s chlSab2.chr13 96705281 315 + 98384682 AGTGACAGCTGTTTACAATTCAGATCCCA-CACTCTGCTGCGAACTCCCCTCCTCTGTG-TCCGGAAGGTTCTATCCACGACTTCCCTTTTGTGCATTTAGTTATTGGCACTGCTCTTTCTCCCC-----------------T-AAAAGAATTCTAAGCAATTA------------------GACTTGC-TTGATTTCCCTTT-AAGGACTTGAACTCA--CTTCCCCCAGCGAATCACACTGGCTTACTTCGTCATTA--ATCTTACGTTTTAGTTTCCTTTCCAAGAACCTGCTCATCTG-TGGTTGCCTTGTCTGTGTTGGAGACCTTCTTGGAGATGGGGTCGTTTTGATAAAGTC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8241100 315 - 10857215 AGTGACAGCTGTTTACAATTCAAATCCCA-CATTCTGTTGCGAACTCTCCTTCTCTGTG-TCCGGAAGGTTCTATCCATGACTTCCCTTTTGTGCATTTAGTTATTGGCACTGCTCTTTCTCCCC-----------------T-AAAAGAATTCTAAGCAATTA------------------GACTTGC-TTGATTTCCCTTT-AAGGACTTGAACTCA--CTTCCCCCAGCGAGTCACACTGGCTTACTTCGTCATTA--ATCTTACGTTTTAGTCTCCTTTCCAAGAACCTGCCAATCTG-CAGTTGCCTTGTCTGTGTTGGAGACCTTCTTGGAGATGGGGTCATTTTGATAAAGTC i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169911346 332 + 171630274 AGTGACAACTGTTTACAATTCAAATCCCA-CGTTCTGCTGTGAACCCTGCTCCTCTGTG-TCCAGAGGTTTCTATACACAACATTCCTTTTGTGCATTTAGTTACTGGCACTGCTTATTTTCCCC-----------------T-AAAAGAACTCTAACCAATTAAAATAATCCTAAGCAATTAACTTGC-TTAATTTCCCCCC-GAGGACTTGAACGCA--CTTCCCCT-GCAAGTCACACCGGGTTACCTGATCGCTG--ATATTACATTTCAGTTTCGCTTCCCAGAGCCAGCTCATCTG-CAGTTGCCTTGTATGTGTTGGAGCCCTGCTCATAGCTGGGGTCATTTTGACAAAGCC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1314005 332 - 2905041 AGTGACAACTGTTTACAATTCAGATCCCA-CGCTCTGCTGTGAACTGTCCTTCTCTGTG-TCCAGAAGGTTCTATCCACCGCTTTCCTTTTGTGCATTTAGTTACTGGCACTGCTCTTTCTCCCC-----------------T-AAAAGAACTCTAACCAACTGAAATCATTCTAAGCAATTAACTTGC-TTAATTTCCCCCT-GAGGACTTGAACTCA--CTTCCCCT-GCAAGTCACACCAGGTTACCTGGTCGCTG--ATATTACATTTTAGTTTCGCTTCCCAGAGCCAGCTCATCTG-CGGTTGCCTTCTATGTGTCGGCGACCTGCTGGTAGGTGGGGTCATTTGGGCAAAGCC i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1276988 331 - 2164891 AGTGACAACTGTTTACAATTCAAATCCCA-CGTTCTGCTGTGAACCGTCCTCCTCTGTG-TCCAGAAGTTTGTATCCACCACTTTCCTTTTGTGCATTTAGTTTCTGGCACTGCTCTTTCTCCCC-----------------T-AAAAGAACTCTAACCAATTAAAATAATTCTAAGCGATTAACTTGC-TTAATTT-CCCCT-GAGGACTTGAACTCA--CTTCCCCT-GCAAGTCACACCAGGTTACCTGGTCGCTG--ATATTACACTTTAGTTTCACTTCCCAGAGCCAGCTCATCTG-CAGTTGCCTTGTATGTTTTGGAGACCTGCTTGTAGGTAGGGTCATTTTGACAAAGTC i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1525523 332 - 1813869 AGTGACAGCTGTTTACAATTCAAATCCCA-CATTCTGCTGTGAACCCTCCTCCTCTGTG-TCTGGAAGGTTCTATTCACCACTTCCCTTTTGTGCATTTAGTTACTGGCACTGCTCTTTCTCCCC-----------------T-AAAATAACTCTAACCAATTAAAATAATTCTAAGCAATTAACTTGC-TTAATGTCCCCCT-GAGGACTTGAACTCA--CTTCCCCT-GCAAGTCACACCGGGTTACCTGGTCGCTG--ATATTACATTTTAGTTTCACTTCCCAGAGCCAGCTCATCTG-AGGTTGCCTTGTATGTGTTGGAGACCTGCTCGTAGGTGGGGTCATTTTGACAAAGTC i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10969241 307 - 12073884 AGTGAC----TTTTACGTTTGAAACACCA-AATTGTGTTGTGAAA---CCTGGTGAGTG-T-TGGAAGGCTGTGCCCCCCACTCTGCTTTTGCAC---TGGTTGCAGTCACCTGTCTTTCTACCC--------------AAGT-AACAGAATTCCAGGCAAGGA------------------GGTTTCC-TTATTTTCCCCAA-ACAGACATGAAATTAACTTTTCCCCAGCAAGTTATGCTGGCTTGGTTGGTCACTG--ATCTTGCATTTTAGTCTCATTTCTGAGAACCAGATTATCTG-TGGTTGCCTCGTATGTTTTGGATAACTTCTCATAGACAAGATTGTTT-GACAAAGT- i otoGar3.GL873575 I 3 C 0 s canFam3.chr1 56193688 325 + 122678785 AGCTCCAGCTGTTCACTCTTCAAACCCCA-CATTTTGTGATGAAGGCTCCTGA-AAGTA-TTTGAAAGG-TATAACCACCACTTTCCATTTGTGC--CCGGTTACCAACACCTCCCTCCATCTCCAGGAAGTTCTAACCAGGG-GAGAGGACTCTAGGTAACTA------------------GATCTCC-TTAGGGCTCCTCA-CAGATATCATATTAA--CTTCCCCCAACAGATCATGCTGGCTT-CCTGGTCCTCA--AGCTCATGTGCTGGCCCCATTTGAGAGGA-CAGGGGAACAG-CAGCTTCCTGGCGTGTATAGGAGACCTTCTTGGGGAC-GGGTCACCCTGAGGATGTC i canFam3.chr1 C 0 I 201 e dasNov3.JH569188 592871 1337 + 760995 I e colAng1.NW_012114488v1 15629144 1919 - 23502949 I a score=63917.000000 s hg38.chr6_KB021644v2_alt 128018 8 + 185823 ACAGAGCA s panTro5.chr6 173584342 8 + 175400573 ACAGAGCA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171817922 8 + 173848474 ACAGAGAA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11500635 8 - 12463322 ACAGAGCA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156329872 8 + 157873769 ACAGAGCA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170355633 8 + 172585720 TCAGAGCA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169100879 8 - 170955103 TCAGAGCA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8387464 8 + 10161646 TCAGAGCA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1419286 8 + 3144229 TCAGAGCA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96705596 8 + 98384682 TCAGAGCT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8241415 8 - 10857215 TCAGAGCA i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169911678 8 + 171630274 ACAGAGCG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1314337 8 - 2905041 ACAGAGCA i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1277319 8 - 2164891 ACAGAGCA i cebCap1.NW_016107695v1 C 0 I 243 s aotNan1.NW_018494782v1 1525855 8 - 1813869 ACAAAGCA i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10969548 8 - 12073884 GCAGGACA i otoGar3.GL873575 C 0 C 0 e dasNov3.JH569188 592871 1337 + 760995 I e colAng1.NW_012114488v1 15629144 1919 - 23502949 I e canFam3.chr1 56194013 201 + 122678785 I a score=150437.000000 s hg38.chr6_KB021644v2_alt 128026 44 + 185823 A-AAGCC-ATCACACATCAAAGCCA-GGGCTC-CTC-TGATGCTGAGCC s panTro5.chr6 173584350 44 + 175400573 A-AAGCC-GTCACACATCAAAGCCA-GGGCTC-CTC-TGATGCTGAGCC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171817930 44 + 173848474 A-AAGCC-ATCACACATCAAAGCCA-GGGCTC-CTC-TGATGCTGAGCC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11500643 44 - 12463322 A-AAGCC-GTCACACATCAAAGCCA-GGGCTC-CTC-TGATGCTGAGCC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156329880 44 + 157873769 G-AAGCA-GGCACACGTCAAAGCCA-GGGCTC-CTC-CGATGCTGAGCC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170355641 43 + 172585720 G-AGGCA-GTCACATGTCAAAGCCA--TGCTC-CTC-CGATGCTGAGCC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169100887 43 - 170955103 G-AGGCA-GTCACATGTCAAAGCCA--TGCTC-CTC-CGATGCTGAGCC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8387472 43 + 10161646 G-AGGCA-GTCACATGTCAAAGCCA--TGCTC-CTC-CGATGCTGGGCC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1419294 46 + 3144229 GCAGGCATGTCACATGTCAAAGCCA--TGCTCACTC-CGATGTTGAGCC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96705604 43 + 98384682 G-AGGCA-GTCACATGTCAAAGCCA--TGCTC-CTC-TGGTGCTGAGCC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8241423 43 - 10857215 G-AGGCA-GTCACATGTCAAAGCCA--TGCTC-CTC-CGATGCTGAGCT i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169911686 19 + 171630274 G-AGGCC-TTCACGTGTCGAA---------------------------- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1314345 18 - 2905041 G-AGGCC-TTCGCCTGTTGA----------------------------- i saiBol1.JH378287 C 0 C 0 s aotNan1.NW_018494782v1 1525863 44 - 1813869 G-AGGCC-TTCACGTGTCGAAGCCA-GGGCTC-CCC-CGATGCTGAGCC i aotNan1.NW_018494782v1 C 0 I 199 s otoGar3.GL873575 10969556 41 - 12073884 -CAGGCT-GTTCCACATCCAAGCTGGGGGCTC-CTTGAGATGCC----- i otoGar3.GL873575 C 0 C 0 e cebCap1.NW_016107695v1 1277327 243 - 2164891 I e dasNov3.JH569188 592871 1337 + 760995 I e colAng1.NW_012114488v1 15629144 1919 - 23502949 I e canFam3.chr1 56194013 201 + 122678785 I a score=1222646.000000 s hg38.chr6_KB021644v2_alt 128070 292 + 185823 AGTGGTGGGGCCA--------------------------------------------------------------------GGGCTTCTCCGATGCTGAGCCGGTCCCTTTATCCCGTACCCCATCCTCC-CTGTG--------------TGAAGGGCATGTGAGACAAAGCCCTT--CCAAG---TGCAGGACCTGACTCA-TAGCTCTGACACCTCTGCTTCCTGGGCCGTGTGTGGACAGGCACTGTCTTCTTGAGTGTAGACTG------TGTGTTTTTCATTCTTCCATCTG-CGACCCGTGGACCTGGGCGTGGGCGATATGGCTGCATTGAGCCTCTAACTGGCTTTCTTATGATAAttatttttattttta--tttttttga s panTro5.chr6 173584394 258 + 175400573 A------------------------------------------------------------------------------------------------------GTCCCTTTATCCCGTACCCCATCCTCC-CTGTG--------------TGAAGGGCATGTGAGACAAAGCCCTT--CCATG---TGCAGGACCTGACTCA-TAGCTCTGACACCTCTGCTTCCTGGGCCGTGTGTGGACAGGCACTGTCTTCTTGAGTGTAGACTG------TGTGTTTTTCATTCTTCCATCTG-CGACCCGTGGACCTGGGCGTGGGTGACATGGCTGCATTGAGCCTCTAACTGGCTTTCTTATGATAAttatttttattttta--tttttttga i panTro5.chr6 C 0 C 0 s panPan2.chr6 171817974 359 + 173848474 AGTGGTGGGGCCAGGGCTCCTCCGATGCCGAGCCAGTGGTGGGGCCGGGGCTCCTCCGATGCCGAGCCAGTGGTGGGGCCGGGGCTTCTCCGATGCTGAGCCGGTCCCTCTATCCCGTACCCCATCCTCC-CTGTG--------------TGAAGGGCATGTGAGACAAAGCCCTT--CCATG---TGCAGGACCTGACTCA-TAGCTCTGACACCTCTGCTTCCTGGGCCGTGTGTGGACAGGCACTGTCTTCTTGAGTGTAGACTG------TGTGTTTTTCATTCTTCCATCTG-TGACCTGTGGACCTGGGCGTGGGCGACATGGCTGCATTGAGCCTCTAACTGGCTTTCTTACGATAAttattttta-tttta--tttttttga i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11500687 292 - 12463322 AGTGGTGGGGCCA--------------------------------------------------------------------GGGCTTCTCCGATGCTGAGCCGGTCCCTTTATCCCGTACCCCATCCTCC-CTGTG--------------TGAAGGGCATGTGAGACAAAGCCCTT--GCATG---TGCAGGACCTGACTCA-TAGCTCTGACACCTCTGCTTCCTGGGCCATGTGTGGACAGGCACTGTCTTCTTGAGTGTAGACTG------TGTGTTTTTCATTCTTCCATCTG-CGACCTGTGGACCTGGGTGTGGGCGACATGGCTGCATTGAGCTTCTAACTGGCTTTCTTACGATAAttatttttattttta--tttttttga i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156329924 258 + 157873769 G------------------------------------------------------------------------------------------------------GTCCCTTTATCCCGTACCCTATCCTCC-CTGTG--------------TGAAGGGCGTGTGAGACAAAGCCCTT--CCATG---TGCAGGACCTGACTCA-TAGCTCTGACACCTCTGCTTCCTGGGCTGTGTGTGGTCAGACACTGTCTTCTTGAGTGTAGACTG------TGTGTTTTTCATTCTTCCATCTG-CGATCCATGGACCCAGGCATGGGCGACATGGCTGCATTGAGACTCTAACTGGCTTTCTTATGATAAttatttttactttta--tttttttga i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170355684 261 + 172585720 G------------------------------------------------------------------------------------------------------GTCCCTTTATCCCGTGCCCCATCCTCCTCTGTG--------------TGAAGGACGAGTCAGACAAGGCCCTT--CCGTG---TACAGGACCTGACTCA-TAGCTCTGAAACCTCTGCTTCCTGGGCCATGTGTGGACGGGCACTGTCTCCTTGAGTGTACACTG------TGTGGTTTTCATTCTTCCATCCG-TGGCCTGTGGACCTGGGAATAGGCGACGTGGCTGCATCGAGCCTCTAATTGGCTTTCTTACCATAAttatttttatttttatttttttttga i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169100930 261 - 170955103 G------------------------------------------------------------------------------------------------------GTCCCTTTATCCCGTGCCCCATCCTCCTCTGTG--------------TGAAGGACGAGTCAGACAAGGCCCTT--CCGTG---TACAGGACCTGACTCA-TAGCTCTGAAACCTCTGCTTCCTGGGCCATGTGTGGACGGGCACTGTCTCCTTGAGTGTACACTG------TGTGGTTTTCATTCTTCCATCCG-TGGCCTGTGGACCTGGGAATAGGCGACGTGGCTGCATCGAGCCTCTAATTGGCTTTCTTACCATAAttatttttatttttatttttttttga i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8387515 260 + 10161646 G------------------------------------------------------------------------------------------------------GTCCCTTTATCCCGTGCCCCATCCTCCTCTGTG--------------TGAAGGACGAGTCAGACAAGGCCCTT--CCGTG---TACAGGACCTGACTCA-TAGCTCTGAAACCTCTGCTTCCTGGGCCATGTGTGGACGGGCACTGTCTCC-TGAGTGTACACTG------TGTGCTTTTCATTCTTCCATCCG-TGGCCTGTGGACCTGGGAATAGGCGACGTGGCTGCATCGAGCCTCTAATTGGCTTTCTTACCATAAttatttttatttttatttttttttga i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1419340 257 + 3144229 G------------------------------------------------------------------------------------------------------GTCCCTTTAT--CATGCCCCATCCTCTCCTGTG--------------TGAA-GACGAGTGAGACAAAGCCCTTTCCCGTG---TACAGGACCTGACTCA-TAGCTCTGAAA-CTCTGCTTCCT-GGCCATGTGTGGACGGCCACTGTCTCCTTGAGTGTACACTG------TGTGGTTTTCATTCTTCCATCCG-TGGCCTGTGGACCTGGGAATAGGCGACATGACTGCATCGAGCCTCTAATTGGCTTTC-TACGATAAttattttttatttttattttttttga i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96705647 258 + 98384682 G------------------------------------------------------------------------------------------------------GTCCCTTTATCCCGTGCCCCATCCTCCCCTGCG--------------TGAAGGACGAGTGAGACAAAGCCCTT--CCGTG---TACAGGACCCGACTC---AGCTCCGACACCTCTGCTTCCTGGGCCATGTGTGGACGGGCACTGTCTTCTTGAGTGTACACTG------TGTGGTTTTCATTCTTCCATCCG-TGACCTGTGGACCTGGGCATGAGCGACATGGCTGCATTGAGCCTCTAATTGGCTTTCTTACGATAAttatttttattttta-ttttttttga i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8241466 260 - 10857215 G------------------------------------------------------------------------------------------------------GTCCCTTTATCCCGTGCCCCATCCTCCTCTGTG--------------TGAAGGACGAGTGAGACAAAGCCCTT--CTGTG---TACAGGACCTGACTCA-TAGCTCTGAAACCTCTGCTTCCTGGGCCATGTGTGGACGGGCACTGTCTCCTTGAGTGTACACTG------TGTGGTTTTCATTCTTCCATCCG-TGGCCTGTGGACCTGGGAATAGGCGACATGGCTGCATCAAGCCTCTAATTGGCTTTCTTACGATAAttatttttattttta-ttttttttga i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169911705 218 + 171630274 -----------------------------------------------------------------------------GCCAGGGCTCCCCCGATGCTGAGCTGGTCCCATTATCCCCTGGCCTGTCCTCCCCTGTG--------------TGGAGGGTGTGGGAGACAAAGCCCTT--CCACG---TGCAGGACCTGAGTCA-CAGCTCCGACGCCCCTGCTGCCTGGGCC-TGTATGGACGGGCACCGTCTTCTTGAGTATAGACTTATAGACTGGGCTTTCCATTCCTTC--TCGTTTACCCATCGACCTGGGCGT------------------------------------------------------------------------ i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1314363 221 - 2905041 --------------------------------------------------------------------------------AGGGCTCCCCCGATGCTGAGCGGGTCCCATTATCCCCTGGCCTGTCCTTCCCTGTG--------------TGGAGGATGTGGGAGACAAAGCCCTT--CCACA---TACAGGACCTGAGTCA-CAGCTCTGATGCACCTGCTGCCTGGGCC-TGTGTGGACAGGCACTGTCTTCTTGAGTATAGACTTATAGACTGGGCTTTCCATTCCTCCGTCCGTTTACCCATGGACCTGGGCATGGGC-------------------------------------------------------------------- i saiBol1.JH378287 C 0 I 1 s otoGar3.GL873575 10969597 235 - 12073884 -----------------------------------------------------------------------------------------------------TGGT-----------GGATCCTGTCCTTGCCTGGGACCAGCTGACGTGATGGATGGCGTGTGAGACAGAGGCCTC--TGGTGTCTTGCACGATCTGACTTACTCTCTCTGACCTGTCTGCTTCCTGGGGCCACTGCAGA-AGGAATTGTCTACCC-AGCACCAACCC------CCTGCCCTTTCCTTCTTCATCCC-TGACCCCTGGA---------------------TACACGGAGCCTTGGACTGGCTCTCTTACAGGCACATTTTTTAAATTGA----------- i otoGar3.GL873575 C 0 C 0 e aotNan1.NW_018494782v1 1525907 199 - 1813869 I e cebCap1.NW_016107695v1 1277327 243 - 2164891 I e dasNov3.JH569188 592871 1337 + 760995 I e colAng1.NW_012114488v1 15629144 1919 - 23502949 I e canFam3.chr1 56194013 201 + 122678785 I a score=7800.000000 s hg38.chr6_KB021644v2_alt 128362 1 + 185823 g s panTro5.chr6 173584652 1 + 175400573 g i panTro5.chr6 C 0 C 0 s panPan2.chr6 171818333 1 + 173848474 g i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11500979 1 - 12463322 g i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156330182 1 + 157873769 g i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170355945 1 + 172585720 g i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169101191 1 - 170955103 g i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8387775 1 + 10161646 g i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1419597 1 + 3144229 g i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96705905 1 + 98384682 g i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8241726 1 - 10857215 g i manLeu1.NW_012106474v1 C 0 C 0 s aotNan1.NW_018494782v1 1526106 1 - 1813869 g i aotNan1.NW_018494782v1 I 199 C 0 s otoGar3.GL873575 10969832 1 - 12073884 G i otoGar3.GL873575 C 0 C 0 e saiBol1.JH378287 1314584 1 - 2905041 I e cebCap1.NW_016107695v1 1277327 243 - 2164891 I e calJac3.chr4 169911923 0 + 171630274 C e dasNov3.JH569188 592871 1337 + 760995 I e colAng1.NW_012114488v1 15629144 1919 - 23502949 I e canFam3.chr1 56194013 201 + 122678785 I a score=749449.000000 s hg38.chr6_KB021644v2_alt 128363 93 + 185823 acagagtcacgctcagttgcccaggctggagtgcagtggtgtaatctcagctcactgcaacctccgcctccccagctcaagccattctcctgc s panTro5.chr6 173584653 93 + 175400573 acagagtcccactcagttgcccaggctggagtgcagtggtgtaatctcagctcactgcaacctccgcctccccggctcaagccattctcctgc i panTro5.chr6 C 0 C 0 s panPan2.chr6 171818334 93 + 173848474 acagagtcccgctcagctgcccaggctggagtgcagtggtgtgatctcagctcactgcaacctccgcctccccggctcaagccattctcctgc i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11500980 93 - 12463322 acagagtcctgctctgttgcccaggctggagtgcagtggtgtaatctcagctcactgcaacctccgcctccccagctcaagccattctcctgc i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156330183 93 + 157873769 acagagtcccgctcagttgcccaggctggagtgcagtgccacaatctcagctcactgcaacctccgccgccccggctcaagcccttctcctgc i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170355946 93 + 172585720 acagagtcccactcagttgcccaggctggagtgcagtgccacaatctcagctcactgcaacctccgcctccccggctcaagccattctcctgc i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169101192 93 - 170955103 acagagtcccgctcagttgcccaggctggagtgcagtgccacaatctcagctcactgcaacctccgcctccccggctcaagccattctcctgc i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8387776 93 + 10161646 acagagtcccgctcagttgcccaggctggagtgcagtgccacaatctcagctcactgcaacctccgcctccccggctcaagccattctcctgc i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1419598 89 + 3144229 agag---cccactcgattgcccaggctggagtgcagtgccacaatctcagctcactgcaacc-ccgcctccccggctcaagccattctcctgc i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96705906 93 + 98384682 acagagtcccgctcagttgcccaggctggagtgcagtgccacaatctcagctcactgcaacctctgcttccccggctcaagccattctcctgc i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8241727 91 - 10857215 --agagtcccgctcagttgcccaggctggagtgcagtgccacaatctcagctcactgcaacctccgcctccccggctcaagccattctcctgc i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169911923 90 + 171630274 ---gagtcttgctcagtcacccaggctggagtgcagtgatacaatctttatttgctgcaacctccgcctcctgggctcaagccattctcctgc i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1314585 93 - 2905041 acagagtctcgctcagtcacccaggctggagtgcagtggtgcaatctttattcacggcaacccccgcctcctgggctcaagccattctcctgc i saiBol1.JH378287 I 1 C 0 s cebCap1.NW_016107695v1 1277570 93 - 2164891 acagagtcttgctcagtcacccaggctggagtgcagtggtgcaatcttcattcactgcaaccttcacctcctgggctcaagattttctcctac i cebCap1.NW_016107695v1 I 243 C 0 s aotNan1.NW_018494782v1 1526107 93 - 1813869 acagagtcttgctcagtcacctaggctggagtgcagtggtggagtctttattcactgcaacctccgcctcctgggctcaagccattctcctgc i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10969833 64 - 12073884 AGAAAGTTT---------------------GTGTTAT-CTATAAGCTTTTCTCTC----AATTTCTCTTCCCCTGCCTAAAC---TCCCCTGT i otoGar3.GL873575 C 0 C 0 e dasNov3.JH569188 592871 1337 + 760995 I e colAng1.NW_012114488v1 15629144 1919 - 23502949 I e canFam3.chr1 56194013 201 + 122678785 I a score=25976.000000 s hg38.chr6_KB021644v2_alt 128456 2 + 185823 ct s panTro5.chr6 173584746 2 + 175400573 ct i panTro5.chr6 C 0 C 0 s panPan2.chr6 171818427 2 + 173848474 ct i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11501073 2 - 12463322 ct i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156330276 2 + 157873769 ct i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170356039 2 + 172585720 ct i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169101285 2 - 170955103 ct i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8387869 2 + 10161646 ct i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1419687 2 + 3144229 ct i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96705999 2 + 98384682 ct i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8241818 2 - 10857215 ct i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15631063 2 - 23502949 ct i colAng1.NW_012114488v1 I 1919 C 0 s calJac3.chr4 169912013 2 + 171630274 ct i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1314678 2 - 2905041 ct i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1277663 2 - 2164891 ct i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1526200 2 - 1813869 ct i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10969897 2 - 12073884 CT i otoGar3.GL873575 C 0 I 75 e dasNov3.JH569188 592871 1337 + 760995 I e canFam3.chr1 56194013 201 + 122678785 I a score=1301212.000000 s hg38.chr6_KB021644v2_alt 128458 148 + 185823 cagcctcctgagtagctgggatt-acaggcac-ctgccaccatgcccagctaatttttgtattttt-agtagag-------atggggtttcaccatgttgtccaggctggtcttgagctcc---------tgacctcaggcgattcgcctgcctcggcctcccaaag s panTro5.chr6 173584748 148 + 175400573 cagcctcctgagtagctgggatt-acaggcac-ctgccaccatgcccagctaatttttgtattttt-agtagag-------atggggttttaccatgttggccaggctggtcttgagctcc---------tgacctcaggcgatttgcctgcctcggcctcccaaag i panTro5.chr6 C 0 C 0 s panPan2.chr6 171818429 148 + 173848474 cagcctcctgagtagctgggatt-acaggcac-ctgccaccatgcccagctaatttttgtattttt-agtagag-------atggggtttcaccatgttggccaggctggtcttgagctcc---------tgacctcaggtgattcgcctgcctcggcctcccaaag i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11501075 148 - 12463322 cagcctcctgagtagctgggatt-acaggcac-ctgccaccatgcccagctaatttttgtattttt-agtagag-------atggggtttcaccatgttggccaggctggtcttgagctcc---------tgacctcaggtgattcgcctgcctcggcctcccaaag i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156330278 149 + 157873769 cagcctcctgagtagctgggatt-acaggcac-ctgccaccacgcccagctaatttttgtatttttaaatagag-------atggggtttcaccatgttggccaggctggtcttgaactcc---------tgacctcaggcgatctgcccgcctcggcctcccaaag i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170356041 147 + 172585720 cagcctcctgagtagctgggatt-acag--gcgccaccaccacgcccagctaatttttgtattttt-agtaaag-------acggggtttcaccatgttggcccggctggtgttgaactcc---------tgacctcaggtgatccacctgcctcggcctcctgaag i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169101287 147 - 170955103 cagcctcctgagtagctgggatt-acag--gcgccgccaccacgcccagctaatttttgtattttt-agtaaag-------acggggtttcaccatgttggcccggctggtgttgaactcc---------tgacctcaggtgatccacctgcctcggcctcctgaag i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8387871 149 + 10161646 cagcctcctgagtagctgggatt-acaggcgcgccaccaccacgcccagctaatttttgtatttgt-agtaaag-------acggggtttcaccatgttggcccggctggtgttgaactcc---------tgacctcaggtgatccacctgcctcggcctcctgaag i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1419689 148 + 3144229 cagcctcctgagtagctgggattaacaggcaccccaccaccacgcccagctaatttttgtattttt-agtaaag-------ac-gggtttcaccatgttgg-ccggctggtgttgaactcc---------tgacctcaggtgagccacctgcctcggcctcccaaag i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96706001 148 + 98384682 cagcctcctgagtagctgggatt-acaggcgc-ccaccaccacgcccagctaatttttgtatttgt-tgtaaag-------acagggtttcaccatgttggcccagctggtgttgaactcc---------tgacctcaggtgatccacctgcctcggcctccagaag i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8241820 148 - 10857215 cggcctcctgagtagctgggatt-acaggcgc-ccgccaccacgcccagctaatttttgtattttt-agtaaag-------acggagtttcaccatgttggcccggctggtgttgaactcc---------tgacctcaggtgagccacctgcctcggcctcccaaag i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15631065 148 - 23502949 cagcctcctgagtagctgggatt-acaggcac-ccaccgccacacccagctaatttttgttttttt-agtaaag-------acggtgtttcaccatgttggcccggctggtgttgaactcc---------tgacctcaggtgatccacctgcctcggcctcccaaag i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169912015 154 + 171630274 cagtctcccaag-agctaagatt-acaggcac-ccgccaccatgctcagctaatttttgtattttt-agtaaagatgaactatgaactttcaccgtgctggccaggctggtcttgaaccca---------tgacctcaggtgatccacccacctcagcttctcaaag i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1314680 146 - 2905041 cagcctcccaag-agctaagatt-acaggcat-ccgccaccatgctcagctaatttttgtgttttt-agtaaag-------atgaagtttcaccatgttggccaggctggtcttg-acaca---------tgatctcaggtgatccacccacctcagcttctcaaag i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1277665 156 - 2164891 cagcgtcccaag-agctaagatt-acaggcgt-ctgccaccatgctcagctaatttttgtattttt-agtacag-------atgaagtttcaccatgttggccaggctggtcttgaacacatggaacacctgacctcaggtgttccacccacctcagcttctgaaag i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1526202 147 - 1813869 caccctcccaag-agctaagatt-acaggcac-ccgccaccatgctcagctaatttttgtattttt-agtaaag-------atgaagtttcaccatgttggccaggctggtcttgaacaca---------tgacttcaggtgatccacctacctcagcttcttaaag i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10969899 75 - 12073884 I e dasNov3.JH569188 592871 1337 + 760995 I e canFam3.chr1 56194013 201 + 122678785 I a score=122802.000000 s hg38.chr6_KB021644v2_alt 128606 15 + 185823 tgctggaattacagg s panTro5.chr6 173584896 15 + 175400573 tgctatgattacagg i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11501223 15 - 12463322 tgctgggattacagg i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156330427 15 + 157873769 tgctgggattacagg i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170356188 15 + 172585720 tgttgggattacagg i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169101434 15 - 170955103 tgttgggattacagg i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8388020 15 + 10161646 tgttgggattacagg i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1419837 13 + 3144229 -gtt-ggattacagg i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96706149 15 + 98384682 tgttgggattacagg i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8241968 15 - 10857215 ggttgggattacagg i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15631213 15 - 23502949 ggttgggattacagg i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169912169 15 + 171630274 tgctgggattacagg i calJac3.chr4 C 0 I 2077 s saiBol1.JH378287 1314826 15 - 2905041 tgctgggattacagg i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1277821 15 - 2164891 tgctgggattacagg i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1526349 15 - 1813869 tgctgggattacagg i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10969899 75 - 12073884 I e dasNov3.JH569188 592871 1337 + 760995 I e canFam3.chr1 56194013 201 + 122678785 I e panPan2.chr6 171818577 0 + 173848474 C a score=94446.000000 s hg38.chr6_KB021644v2_alt 128621 15 + 185823 tgtgagccaccgcgc s panTro5.chr6 173584911 15 + 175400573 tgtgagccaccgtgc i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11501238 15 - 12463322 tgtgagccaccgcac i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156330442 15 + 157873769 tgtgagccactgcgc i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170356203 15 + 172585720 catgagccactgcac i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169101449 15 - 170955103 cacgagccactgcac i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8388035 15 + 10161646 catgagccactgcac i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1419850 14 + 3144229 catga-ccactgcac i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96706164 15 + 98384682 catgagccactgcac i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8241983 15 - 10857215 cgtgagccactgcac i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15631228 15 - 23502949 catgagccactgcac i colAng1.NW_012114488v1 C 0 C 0 s saiBol1.JH378287 1314841 15 - 2905041 catgagccaccgccc i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1277836 15 - 2164891 catgagccattgccc i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1526364 15 - 1813869 catgagccactgccc i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10969899 75 - 12073884 I e calJac3.chr4 169912184 2077 + 171630274 I e dasNov3.JH569188 592871 1337 + 760995 I e canFam3.chr1 56194013 201 + 122678785 I e panPan2.chr6 171818577 0 + 173848474 C a score=414860.000000 s hg38.chr6_KB021644v2_alt 128636 63 + 185823 ac-ggccTACAATAATATTTTTAAAACGGCTTTCTCCTATTTTCTTTGGCCTGTCTAAACTTAA s panTro5.chr6 173584926 63 + 175400573 ac-ggccTACAATAATATTTTTTAAACGGCTTTCTCCTATTTTCTTTGGCCTGTCTAAACTTAA i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11501253 63 - 12463322 ac-ggccTACAATAATATTTTTAAAATGGCTTTCTCCTATTTTCTTTGGCCTATCTAAACTTAA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156330457 63 + 157873769 cc-ggccTACAATAATATTTTTATAAAGGCTTTTTCCTATTTTCTTTGGCCTGTCTAAACTTAA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170356218 63 + 172585720 cc-ggccTACAGTAATATTTTTTAAACGGTTTTCTCCTGTTTTCTTTGGCCTGTCTAAACCTAA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169101464 63 - 170955103 cc-ggccTACAGTAATATTTTTAAAACGGCTTTCTGCTGTTTTCTTTGACCTGTCTAAACTTAA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8388050 63 + 10161646 cc-ggccTACAGTAATATTTTTAAAACGGTTTTCTCTTGTTTTCTTTGGCCTGTCTAAACTTAA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1419864 63 + 3144229 cctggccTACAGTAATATTTTTAAAACGGC-TTCTCCTATTTTCTTTGGCCTGTCTAAACTTAA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96706179 63 + 98384682 cc-ggccTACAGTAATATTTTTAAAACGGCTTTCTCCTGTTTTCTTTGGCCTGTCTAAACTTAA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8241998 63 - 10857215 cc-ggccTACAGTAATATTTTTAAAACGGCTTTCTCCTGTTTTCTTTGGCTTGTCTAAACTTAA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15631243 59 - 23502949 ct-ggccCACAGTAATATTTTTAAAATGGCCTTCTCCTATTTTCTTTGGC----CTAAACTTAA i colAng1.NW_012114488v1 C 0 C 0 s saiBol1.JH378287 1314856 63 - 2905041 cc-ggccTACAAGAATATTTTTGAAACAGCTTTCTTCTATTTTATTTTGCCTGTCTAAACTTGA i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1277851 63 - 2164891 ct-ggccTACAATAATATTTTTGAAACAGCTTTCTTCTATTTTCTTTTGCCTGTCTAAATTTGA i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1526379 50 - 1813869 cc-ggccTACAATAATA-------------TTTCTTCTGTTTTCTTTTGCCTGTCTAAACTTGA i aotNan1.NW_018494782v1 C 0 C 0 s canFam3.chr1 56194214 63 + 122678785 AC-AGCGTGCAGTGCTGTTGTAGCCACAGTATGTTCTAGTTCCTTCTCCTCTGCACAAATCTGG i canFam3.chr1 I 201 C 0 e otoGar3.GL873575 10969899 75 - 12073884 I e calJac3.chr4 169912184 2077 + 171630274 I e dasNov3.JH569188 592871 1337 + 760995 I e panPan2.chr6 171818577 0 + 173848474 C a score=105430.000000 s hg38.chr6_KB021644v2_alt 128699 12 + 185823 GTATCCATATTT s panTro5.chr6 173584989 12 + 175400573 GTATCCATATTT i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11501316 12 - 12463322 GTATCCATATTT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156330520 12 + 157873769 GTATCCATATTT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170356281 12 + 172585720 GTATCCATATTT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169101527 12 - 170955103 GTATCCATATTT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8388113 12 + 10161646 GTATCCATATTT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1419927 12 + 3144229 GTATCCATATTT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96706242 12 + 98384682 GTATCCATATTT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8242061 12 - 10857215 GTATCCATATTT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15631302 12 - 23502949 GTATCCATATTT i colAng1.NW_012114488v1 C 0 C 0 s saiBol1.JH378287 1314919 12 - 2905041 GTATACACATTT i saiBol1.JH378287 C 0 M 1052 s cebCap1.NW_016107695v1 1277914 12 - 2164891 Gtatacatattt i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1526429 12 - 1813869 GTATACACATTT i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10969974 9 - 12073884 gtatctata--- i otoGar3.GL873575 I 75 C 0 s canFam3.chr1 56194277 12 + 122678785 GTACCCATGTTT i canFam3.chr1 C 0 I 1 e calJac3.chr4 169912184 2077 + 171630274 I e dasNov3.JH569188 592871 1337 + 760995 I e panPan2.chr6 171818577 0 + 173848474 C a score=84753.000000 s hg38.chr6_KB021644v2_alt 128711 11 + 185823 CTGTTTTCTGT s panTro5.chr6 173585001 11 + 175400573 CTGTTTTCTGT i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11501328 11 - 12463322 CTGTTTTCTAT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156330532 11 + 157873769 CTGTTTTCTGT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170356293 11 + 172585720 CTGTTTTCTGT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169101539 11 - 170955103 CTGTTTTCTGT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8388125 11 + 10161646 CTGTTTTCTGT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1419939 11 + 3144229 CTGTCTTCTGT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96706254 11 + 98384682 CTGTTTTCTGT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8242073 11 - 10857215 CTGTTTTCTGT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15631314 11 - 23502949 CTGTTTTCTGT i colAng1.NW_012114488v1 C 0 C 0 s cebCap1.NW_016107695v1 1277926 11 - 2164891 ctgttctctgt i cebCap1.NW_016107695v1 C 0 I 1072 s aotNan1.NW_018494782v1 1526441 11 - 1813869 CTGTTTTCTGt i aotNan1.NW_018494782v1 C 0 I 128 s canFam3.chr1 56194290 11 + 122678785 CTATTTTCTAC i canFam3.chr1 I 1 C 0 e otoGar3.GL873575 10969983 0 - 12073884 C e saiBol1.JH378287 1314931 1052 - 2905041 M e calJac3.chr4 169912184 2077 + 171630274 I e dasNov3.JH569188 592871 1337 + 760995 I e panPan2.chr6 171818577 0 + 173848474 C a score=32983.000000 s hg38.chr6_KB021644v2_alt 128722 13 + 185823 GTTTGGatatata s panTro5.chr6 173585012 9 + 175400573 GTTTGG----AGA i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11501339 9 - 12463322 GTTTGG----AGA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156330543 9 + 157873769 GTTTGG----ATA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170356304 13 + 172585720 GTTTGGATACGTA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169101550 13 - 170955103 GTTTGGATACGTG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8388136 13 + 10161646 GTTTGGATACGTA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1419950 13 + 3144229 GTTTGGATACATA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96706265 13 + 98384682 GTTTGGATACATA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8242084 13 - 10857215 GTTTGGATACATA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15631325 13 - 23502949 GTTTGGatatata i colAng1.NW_012114488v1 C 0 C 0 s otoGar3.GL873575 10969983 5 - 12073884 --------acata i otoGar3.GL873575 C 0 I 2 s canFam3.chr1 56194301 7 + 122678785 ------ACACAAA i canFam3.chr1 C 0 C 0 e saiBol1.JH378287 1314931 1052 - 2905041 M e aotNan1.NW_018494782v1 1526452 128 - 1813869 I e cebCap1.NW_016107695v1 1277937 1072 - 2164891 I e calJac3.chr4 169912184 2077 + 171630274 I e dasNov3.JH569188 592871 1337 + 760995 I e panPan2.chr6 171818577 0 + 173848474 C a score=45250.000000 s hg38.chr6_KB021644v2_alt 128735 8 + 185823 tatatata s panTro5.chr6 173585021 8 + 175400573 TATATATA i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11501348 8 - 12463322 TACATAAA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156330552 8 + 157873769 TATATAAA i nomLeu3.chr3 C 0 I 2 s rheMac8.chr4 170356317 8 + 172585720 TACATATA i rheMac8.chr4 C 0 I 2 s macFas5.chr4 169101563 8 - 170955103 TACATATA i macFas5.chr4 C 0 I 2 s macNem1.NW_012011000v1 8388149 8 + 10161646 TACATATA i macNem1.NW_012011000v1 C 0 I 2 s cerAty1.NW_012002071v1 1419963 8 + 3144229 TACATATA i cerAty1.NW_012002071v1 C 0 I 2 s chlSab2.chr13 96706278 8 + 98384682 TACATATA i chlSab2.chr13 C 0 I 2 s manLeu1.NW_012106474v1 8242097 8 - 10857215 TACATATA i manLeu1.NW_012106474v1 C 0 I 2 s colAng1.NW_012114488v1 15631338 8 - 23502949 tacatata i colAng1.NW_012114488v1 C 0 I 2 s calJac3.chr4 169914261 8 + 171630274 tatatatc i calJac3.chr4 I 2077 I 1 s otoGar3.GL873575 10969990 8 - 12073884 tatatgca i otoGar3.GL873575 I 2 C 0 s canFam3.chr1 56194308 7 + 122678785 -AGATGTA i canFam3.chr1 C 0 C 0 e saiBol1.JH378287 1314931 1052 - 2905041 M e aotNan1.NW_018494782v1 1526452 128 - 1813869 I e cebCap1.NW_016107695v1 1277937 1072 - 2164891 I e dasNov3.JH569188 592871 1337 + 760995 I e panPan2.chr6 171818577 0 + 173848474 C a score=74894.000000 s hg38.chr6_KB021644v2_alt 128743 18 + 185823 tataatatTTT-CCCCATT s panTro5.chr6 173585029 19 + 175400573 TATAATATTTTCCCCCATT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171818577 19 + 173848474 tATAATATTTTCCCCCATT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11501356 18 - 12463322 -AAAAACTTTTCCCCCATT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156330562 15 + 157873769 ----ATATTTTACCCCATT i nomLeu3.chr3 I 2 C 0 s rheMac8.chr4 170356327 18 + 172585720 TATAATATTT-CCCCCGTT i rheMac8.chr4 I 2 C 0 s macFas5.chr4 169101573 17 - 170955103 TATAATATTT--CCCCGTT i macFas5.chr4 I 2 C 0 s macNem1.NW_012011000v1 8388159 17 + 10161646 TATAATATTT--CCCCGTT i macNem1.NW_012011000v1 I 2 C 0 s cerAty1.NW_012002071v1 1419973 19 + 3144229 TATAATATTTCCCCCCGTT i cerAty1.NW_012002071v1 I 2 C 0 s chlSab2.chr13 96706288 19 + 98384682 TATAGTATTTCCCCCCGTT i chlSab2.chr13 I 2 C 0 s manLeu1.NW_012106474v1 8242107 19 - 10857215 TATAATATTTCCCCCCGTT i manLeu1.NW_012106474v1 I 2 C 0 s colAng1.NW_012114488v1 15631348 19 - 23502949 tataatatTTCCCCCCATT i colAng1.NW_012114488v1 I 2 C 0 s calJac3.chr4 169914270 18 + 171630274 tat-atattttcccccatt i calJac3.chr4 I 1 I 7 s otoGar3.GL873575 10969998 7 - 12073884 cataGAA------------ i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56194315 18 + 122678785 TTTGATTTTTT-TCCCATT i canFam3.chr1 C 0 C 0 e saiBol1.JH378287 1314931 1052 - 2905041 M e aotNan1.NW_018494782v1 1526452 128 - 1813869 I e cebCap1.NW_016107695v1 1277937 1072 - 2164891 I e dasNov3.JH569188 592871 1337 + 760995 I a score=421406.000000 s hg38.chr6_KB021644v2_alt 128761 66 + 185823 TTC--------TCTCATTTTCCCTCAATTTCCTAAAAT-TTGCCTTTTTCC--------T----TTTATTTTCTTATGACATTATTC s panTro5.chr6 173585048 71 + 175400573 TTC--------TCTCATTTTCCCTCAATTTCCTAAAAT-TTGCCTTTTTCCTTT---TAT----TTTATTTTCTCATGACATTATTC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171818596 71 + 173848474 TTC--------TCTCATTTTCCCTCAATTTCCTAAAAT-TTGCCTTTTTCCTTT---TAT----TTTATTTTCTCATGACATTATTC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11501374 69 - 12463322 TTC--------TCTCATTTTCCCTCAATTTCCTAAAAT-TTGCCTTTTTCCTTT---TAT----TTTATTTTCTTATGACATTAT-- i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156330577 78 + 157873769 TTCTATTTTTTTCTCATTTACCCTCAATTTCCTAAAAT-TTGCC-TTTTCCTTT---CAT----TTTATTTTCTTATGACATTATTC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170356345 68 + 172585720 TTC-----------CATTTTCCTTCAATTTCCTAAAAT-TTGCCTTTCTCCCTT---TAT----TTTATTTACTTCTTACATTATTC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169101590 68 - 170955103 TTC-----------CATTTTCCTTCAATTTCCTAAAAT-TTGCCTTTCTCCCTT---TAT----TTTATTTACTTCTTACATTATTC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8388176 68 + 10161646 TTC-----------CATTTTCCTTCAATTTCCTAAAAT-TTCCCTTTCTCCCTT---TAT----TTTATTTACTTCTTACATTATTC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1419992 68 + 3144229 TTC-----------CATTTTCCCTCAATTTCCTAAAAT-TTGCCTTTCTCCCTT---TAT----TTTATTTACTTCTTAAGTTATTC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96706307 68 + 98384682 TTC-----------CATTTTCCTTCAATTTCCTAAAAT-TTGCCTTTCTCCCTT---TAT----TTTATTTACTTCTTACATTATTC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8242126 68 - 10857215 TTC-----------CATTTTCCCTCAATTTCCTAAAAT-TTGCCTTTCTCCCTT---TAT----TTTATTTACTTCTTACGTTATTC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15631367 68 - 23502949 TTC-----------CATTTTCCCTCCATTTCCTAAAAT-TTGCCTTTCTCCCTT---TAT----TTTATTTACTTCTTACATTATTC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169914295 68 + 171630274 ttc--------cttcattttcccttagtttcctaaaat-gtttctttccccctt---tat----tttatttacttattccatta--- i calJac3.chr4 I 7 C 0 s saiBol1.JH378287 1315984 68 - 2905041 TTT--------CCTCATTTTCCCTTAGTTTCCTAAAAT-GTTCCTTTCGCCGTT---TAT----TTTATTTACATATTGCGTTA--- i saiBol1.JH378287 M 1052 C 0 s otoGar3.GL873575 10970005 70 - 12073884 --------------CGGGTTTTCTCACTTTCCTAAAATATTGTTTTTCTCCCTT---TATTGGCTTCTGTTGATTGCTATAATGTTC i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56194333 56 + 122678785 --------------------------GTTTTAGAAACA-TTGCCTTTCCCCTTTACCAGC----TCCTTCTACTTGTGGTGTTATTC i canFam3.chr1 C 0 C 0 e aotNan1.NW_018494782v1 1526452 128 - 1813869 I e cebCap1.NW_016107695v1 1277937 1072 - 2164891 I e dasNov3.JH569188 592871 1337 + 760995 I a score=852039.000000 s hg38.chr6_KB021644v2_alt 128827 93 + 185823 TTGTCAAGTACAATTGCTTTTGAATACAAAGTATTTTGGTTTATGATGTTCATGATTTGTCCTGAGATCCTAAAATTTTTGAGGAGAAACCCT s panTro5.chr6 173585119 93 + 175400573 TTGTCAAGTACAATTGCTTTTGAATACAAAGTATTTTGGTTTATGATGTTCATGATTTGTCCTGAGATCCTAAAATTTTTGAGGAGAAACCCT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171818667 93 + 173848474 TTGTCAAGTACAATTGCTTTTGAATACAAAGTATTTTGGTTTATGATGTTCATGATTTATCCTGAGATCCTAAAATTTTTGAGGAGAAACCCT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11501443 93 - 12463322 TTGTCAAGTACAATTGCTTTTGAATACAAAGTATTTTGGTTTATGATGTTCATGATTTGTCCTGAGATCCTAAAATTTTTTAGGAGAAACCCT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156330655 93 + 157873769 TTGTCAAGTACAATTGCTTTTGAATACAAAGTGTTTTGGTTTATGATGTTCATGATTTGTCCTGAGATCCTAAATTTTTTGAGTAGAAACCCT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170356413 93 + 172585720 TTGTCAAGTACAATTGCTTTTGAATATAAAGTATTTTGGTTCATGATGTTCATGATTTTTCCTGAGATCCTAAAATTTTTGAGGAGAAATCCT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169101658 93 - 170955103 TTGTCAAGTACAATTGCTTTTGAATATAAAGTATTTTGGTTCATGATGTTCATGATTTTTCCTGAGATCCTAAAATTTTTGAGGAGAAATCCT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8388244 93 + 10161646 TTGTCAAGTACAATTGCTTTTGAATATAAAGTATTTTGGTTCATGATGTTCATGATTTTTCCTGAGATCCTAAAATTTTTGAGGAGAAATCCT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1420060 91 + 3144229 TTGTCAAGTACAATTGCTTTTGAATACAAAGTATTTTGGTTCATGATGTTCATGGTTTGTCCTGAGATCCTAAAA--TTTGAGGAGAAACCCT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96706375 93 + 98384682 TTGACAAGTACAATTGCTTTTGAATACAAAGTATTTTGGTTCAAGATGTTCATGATTTGTCCTGAGATCCTAAAATTTCTGAGGAGAAACCCT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8242194 91 - 10857215 TTGTCAAGTACAATTGCTTTTGAATACAAAGTATTTTGGTTCATGATGTTCATGATTTGTCCTGAGATCCTAAAATT--TGAGGAGAAACCCT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15631435 93 - 23502949 TTGTCAAGTACAATTGCTTTTGAATACAAAGTATTTTGGTTCATGATGTTCATGATTTGTCCTGAGATCCTAAAATTTTTGAGGAGAAACCCT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169914363 93 + 171630274 atgtcgaatacagttgcttttgaatctaaagtattttGGTTGGTGATGTTCATAACTTGTCCTGAGATCCAAACGTTGTTGAGGAGAAACGCT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1316052 93 - 2905041 TTGTCCAGTACAGTTGCTTTTGAATCCAAAGTATTTTGGTTCATGATGTTCATGACTTGTCCTGAGATCCAAGCGTTTTTGAGGAGAAACCCT i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1279009 93 - 2164891 TTGTCCAGTACAGTTGCTTTTGAATCCGAAGTATTTTGGTTCATGATGTTCATGACTTGTCCTGAGATCCAAACGTTTTTCAGGAGATACCCT i cebCap1.NW_016107695v1 I 1072 C 0 s otoGar3.GL873575 10970075 85 - 12073884 TTGCTGCACACAATTGGATATGAACACAAAGCATTAGGGT--------CTCACGATTTGTCCTGAGATCCTAAACGTTTTAAAGGAAAACCCT i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56194389 57 + 122678785 TTGTTGCATTTGATTGCTTTGGAACACAAAGTATTTTGGTTCA-----------ATTTGTCCCCACTT------------------------- i canFam3.chr1 C 0 C 0 e aotNan1.NW_018494782v1 1526452 128 - 1813869 I e dasNov3.JH569188 592871 1337 + 760995 I a score=2291142.000000 s hg38.chr6_KB021644v2_alt 128920 245 + 185823 TGTCTTCACTTCTAAGACTATTTTATTTTAGTTCTTTTCTCTGCATCCCCCTTAACCAG-CTAATAACATTTTGTCTTGATTTCATAATATGATAGGTTTTCATCTT------TGTGACTACCATGTGGTCACTT-TT-------ACTCAC--TAGGCTTTTGAACTCAAT------TT------AAACAGAA---TAACTTACCAGTGCAAAATATGAGGTTAGATGAGTAAGTTGGAATCAAAATTCTGCCATGTTG---GGCAAATTATTCACCTAC s panTro5.chr6 173585212 245 + 175400573 TGTCTTCACTTCTAAGACTATTTTATTTTAGTTCTTTTCTCTGCATCCCCCTTAACCAG-CTAATAGCATTTTGTCTTGATTTCATAATATGATAGGTTTTCATCTT------TGTGACTATCATGTGGTCACTT-TT-------ACTCAC--TAGGCTTTTGAACTCAAT------TT------AAACAGAA---TAACTTACCAGTGCAAAATATGAGGTTAGATGAGTAAGTTGGAATCAAAATTCTGCCATGTTG---GGCAAATTATTCACCTAC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171818760 245 + 173848474 TGTCTTCACTTCTAAGACTATTTTATTTTAGTTCTTTTCTCTGCATCCCCCTTAACCAG-CTCATAGCATTTTGTCTTGATTTCATAATATGATAGGTTTTCATCTT------TGTGACTATCATGTGGTCACTT-TT-------ACTCAC--TAGGCTTTTGAACTCAAT------TT------AAACAGAA---TAACTTACGAGTGCAAAATATGAGGTTAGATGAGTAAGCTGGAATCAAAATTCTGCCATGTTG---GGCAAATTATTCACCTAC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11501536 240 - 12463322 TGT-----CTTCTAAGACTATTTTATTTTAGTTCTTTTCTCTGCATCCCCCTTAACCAG-CTAATAGCATTTTGTCTTGATTTCATAATATGATAGGTTTTCATCTT------TGTGACTACCATATGGTCACTT-TT-------ACTCAC--TAGGCTTTTGAACTCAAT------TT------AAACAGAA---TAACTTACCAGTGCAAAATATGAGGTTAGATGAGTAAGTTGGAATCAAAATTCTGCCATGTTG---GGCAAATTATTCACCTAC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156330748 245 + 157873769 TGTCTTCGCTTCTAAGACTATTTTATTTTGGTGCTTTTCTCTGCATCCCCCTTAACCAG-TTAATAGCATTTCGTCTTGATTTCATAATATGATAGGTTTTCATCTT------TGTGACTATCATATGGTCACTT-CT-------ACTCAC--TAGGCTTTTGAACTCAGT------TT------AAACAGAA---TAACTTACCCGTGCAAAATATGAGGTCAGAGGAGTAAGTTGGAATCAAAATTCTGCCATGTTG---GGCAAATTATTCACCTAC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170356506 247 + 172585720 TGTCTTCACTGATAAGACTATTTTATTTCAGTTCTTTTCTTTGCATCCCCCTTAACCAGTTTAATAGCATTTTGTCTTGATTTCATAGTATGCTAGGTTTTCATCTT------TGTGACTATGCTGTGGTCATTT-TT-----T-ACTCAC--TAGGCTTTTGAACTCAAT------TT------AAACAGAA---TAACTTACCGGTGCAAAATATGGGGTCAGATGAGTAAGTTGGAATCAAAATTCTGCCGTGTTG---GGCAAATTATTCACCTAC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169101751 248 - 170955103 TGTCTTCACTGATAAGACTATTTTATTTCAGTTCTTTTCTTTGCATCCCCCTTAACCAGTTTAATAGCATTTTGTCTTGATTTCATAGTATGCTAGGTTTTCATCTT------TGTGACTATGCTGTGGTCATTT-TT-----TAACTCAC--TAGGCTTTTGAACTCAAT------TT------AAACAGAA---TAACTTACCGGTGCAAAATATGGGGTCAGATGAGTAAGTTGGAATCAAAATTCTGCCGTGTTG---GGCAAATTATTCACCTAC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8388337 248 + 10161646 TGTCTTCACTGATAAGACTATTTTATTTCAGTTCTTTTCTTTGCATCCCCCTTAACCAGTTTAATAGCATTTTGTCTTGATTTCATAGTATGCTAGGTTTTCATCTT------TGTGACTATGCTGTGGTCATTT-TT-----TAACTCAC--TAGGCTTTTGAACTCAAT------TT------AAACAGAA---TAACTTACCGGTGCAAAATATGGGGTCAGATGAGTAAGTTGGAATCAAAATTCTGCCGTGTTG---GGCAAATTATTCACCTAC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1420151 248 + 3144229 TGTCTTCACCGATAAGACTATTTTATTTCAGTTCTTTTCTTTGCATCCCCCTTAACCAG-TTAATAGCGTTTTGTCTTGATTTCATAGTATGCTAGGTTTTCATCTT------TGTGACTATGATGTGGTCATTT-TT-------ACTCAC--TAGGTTTTTGAACTCAAT------TT------CAACAGAA---TAACTTACCGGTGCAAAATATGGGGTCAGATGAGTAAGTTGGAATCAAAATTCTGCCGTGTTGTTCTGCAAATTATTCACCTAC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96706468 246 + 98384682 TGTCTTCACTGATAAGACTATTTTATTTCAGTTCTTTTCTTTGCATACCCCTTAACCAG-TTAATGGCGTTTTGGCTTGATTTCATAGTATGCTAGGTTTTCATCAT------TGTGACTATGATGTGGTCATTTGTT-------AATCAC--TAGGCTTTTGAACTCAAT------TT------AAACAGAA---TAACTTACCGGTGCAAAATATGGGGTCAGATGAGTAAGTTGGAATCAAAATTCTGCCGTGTTG---GGCAAATTATTCATCTAC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8242285 245 - 10857215 TGTCTTCACCGATAAGACTATTTTATTTCAGTTCTTTTCTTTGCATCCCCCTTAACCAG-TTAATAGCGTTTTGTCTTGATTTCATAGTATGCTAGGTTTTCATCTT------TGTGACTATGATGTGGTCATTT-TT-------ACTCAC--TAGGTTTTTGAACTCAAT------TT------CAACAGAA---TAACTTACCGGTGCAAAATATGGGGTCAGATGAGTAAGTTGGAATCAAAATTCTGCCGTGTTG---GGCAAATTATTCACCTAC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15631528 246 - 23502949 TGTCTTCACTGATGAGACTATTTTATTTTAGTTCTTTTCTTTGCATCCCCCTTAACCAG-TTAATAGCGTTTTGTCTTGATTTCATAGTATGCTGGGTTTTCATCTT------TGTGACTATGATGTGGTCATTT-TT-----T-ACTCAC--TAGGCTTTTGAACTCAAT------TT------AAACAGAA---TAACTTACCGGTACAAAATATGGGGTCAGATGAATAAGTTGGAATCAAAATTCTGCCATGTTG---GGCAAATTATTCACCTAC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169914456 238 + 171630274 TGTCTTCGCTTCTAAGACGATTTTATTTTCATTCTTTTGTCTGCACCTCCCTTAAGTGG-TTAACAG-----TGTCTTGATTTCATAATGGGATAGGTTTTCATCTC------TGCAGC--TGGCGTGATCATTT-TT-----T-TCTCAC--TAGGTTTTTGAACTCAA-------TT------AAACAGAA---TAACTTTCTGGTGCAAAATGTGGGGTCAGATCAGTAAGTTTGAATCAAAATTCTGCCATCTTG---GGCAAGTTATCCACCTAC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1316145 228 - 2905041 TGCCTTCACTTTGAAGATGATTTTATTTTCGTTCTTTTGTCTGCACCTCCCTTAACCAG-TTA------------------TTCATCAGGGGATAGATTTTCATCTC------TGCAACTGTGGTGTGGTCATTT-TT-----T-ACTCAC--TAGGCTTTTGAACTCAAT------TT------AAACAGAA---TCACTTTCTGGTGCAAAATACGGGGTCAGATCAGTAAGTTTGAATCAAAATTCTGCCGTGTTG---GGCAAGTTATTCACCTAC i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1279102 244 - 2164891 TGTCTTTACTTTTAAGACGATTTCATTTTTGTTCTTTTGTCTGCACCTCCCTTAACCTG-TTAACAGTGTTTTGTCTTGATTTCGTAACGGGGTAGGTTTTCATCTC------TGCAAC--TGGTGTGATCATTT-TT-----T-ACTCAC--TAGGCTTTTGAACTCAAT------TT------AAACAGAA---TAGCTTTCGAGTGTAAAATATGGGGTCAGATCAGTAAGTTTGAATCAAAATTCTGCCATGTTG---GGCAGGTTATTCACCTAC i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1526580 244 - 1813869 TGTCTTCACTTTTAAGACGATTTCATTTTCGTTC--TTGTCTGCAGCTCCCTTAACTAG-TTAACGGTGTTTTGTCTTGATTTCATAATGGGATAGGTTTTCATCTC------TGCAACTGTCGTGTGATCATTT-TT-----T-ACTAAC--TAGGCTTTTGAACTCAAT------TT------AAACAGAA---TCACTTTCTGGTGCAAAATAAGGGGTCAGATCAGTAAGTTTGAATCGAAATTCTGCCATGTTG---GGCAAGTTATTCACCTAC i aotNan1.NW_018494782v1 I 128 C 0 s otoGar3.GL873575 10970160 240 - 12073884 TGCCGTCTCTCTCTATGC--TCTAATCTTAGTTC---TCTCTGTGTCTGTCTGACCACG------------------TGATTTCATAACATGA-GGGGTTTCATATTTCCACGTTTGACAATGGTGTGACATCCT-GT-----T-CCTCACCTTGGACTGCCGAGCTCCTTTATGTGTG------AAAGAAAATTTTTACTTATTGGTACAAAATTTGGAATCATAACTGCAAATTTGGATCAAACTTCTGCCACCTTG---GACAAATAGTGCATCTAA i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56194446 243 + 122678785 TGTATTTGCTTAATA----------------TTCTTATCACTTTA-CCTCCTTGACCAC-CTGATGGCGTTCGGTCTTGGTTTCTTAAAAGAATAGGTTTTTATCTTTCTAAGTTTGACAACGGTGTGATGGTTT-TTATTTTC-TCCCCC--TAGACCATTGAACGTAAT------TTTATGTGAAACAGTA----AATTTATCAGTACGAAATTGGGAATTAGAAATGTAAATCTGAATCAAAGTTTTGCCTCCTTA---GGTCAG--ACCTATCAGC i canFam3.chr1 C 0 C 0 e dasNov3.JH569188 592871 1337 + 760995 I a score=1515555.000000 s hg38.chr6_KB021644v2_alt 129165 148 + 185823 ATATTGTGAAGTGTTGTG-TTATTTCTCCTTATTTATTCTTATGGGGTCTTATTAAAA----TCTTAGCATTTGTTAAAGAAAATAATATTCATCATTTAAAGACCAGACGGTTCAATCTAATGAATTTTAATA-ACAC---AACAAATTAAACCAC s panTro5.chr6 173585457 148 + 175400573 ATATTGTGAAGTGTTGTG-TTATTTCTCCTTATTTATTCTTATTGGGTCTTATTAAAA----TCTTAGCATTTGTTAAAGAAAATAATATTCATCATTTAAAGACCAGACGGTTCAATCTAATGAATTTTAATA-ACAC---AACAAATTAAACCAC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171819005 148 + 173848474 ATATTGTGAAGTGTTGTG-TTATTTCTCCTTATTTATTCTTATTGGGTCTTATTAAAA----TCTTAGCATTTGTTAAAGAAAATAATATTCATCATTTAAAGACCAGACGGTTCAATCTAATGAATTTTAATA-ACAC---AACAAATTAAACCAT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11501776 148 - 12463322 ATATTGTGAAGTGTTGTG-TTATTTCTCCTTATTTATTCTTATTGGGTCTTATTAAAA----TCTTAGCATTTGTTAAGGAAAATAATATTCATCATTTAAAGACCAGACGGTTCAATCTAATGAATTTTAATA-ACAC---AACAAATTAAACCAC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156330993 139 + 157873769 ATATTGTGAAGTGTTGTA-TTATTTCTCCTTATTTATTCTTACTCGGTCTTATTAAAA----TCTTAGCATTTGTT----AAAATAATATTCATCATTTAAAGACCAGACAGCTCAATCTAATGAATTTCAATA-ACAC--------ATTAAACCAC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170356753 152 + 172585720 ATGTTGTGAAGTGTTGTG-TTATTGCTCATTATTTATTCTTATTGGGTCTTAGTAAAATTATTCTTAGCATTTGTTAAAGAAAATAATATTCATCATTTAAAGACCAGACGGTTCGATCTAATGAATTTTAATA-ACAC---AACAAATTAAACCAT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169101999 152 - 170955103 ATGTTGTGAAGTGTTGTG-TTATTGCTCATTATTTATTCTTATTGGGTCTTAGTAAAATTATTCTTAGCATTTGTTAAAGAAAATAATATTCATCATTTAAAGACCAGACGGTTCGATCTAATGAATTTTAATA-ACAC---AACAAATTAAACCAT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8388585 152 + 10161646 ATGTTGTGAAGTGTTGTG-TTATTGCTCATTATTTATTCTTATTGGGTCTTAGTAAAATTATTCTTAGCATTTGTTAAAGAAAATAATATTCATCATTTAAAGACCAGACGGTTCGATCGAATGAATTTTAATA-ACAC---AACAAATTAAACCAT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1420399 152 + 3144229 ATGTTGTGAAGTGTTGTG-TTATTGCTCATTATTTATTCTTATTTGGTCTTATTAAAATTATTCTTAGCATTTGTTAAAGAAAATAATATTCATCATTTAAAGACCAGACGGTTCGATCTAATGAATTTTAATA-ACAC---AGCAAATTAAACCAC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96706714 152 + 98384682 ATGTTGTGAAGTGTTGTG-TTATTGCTCATTATTTATTCTTATTGGGTCTTATTAAAACTATTCTTAGCATTTGTTAAAGAAAATAATATTCATCATTTAAAGACCAGACGCTTCGATCTAATGAATTTTAATA-ACAC---AACAAATTAAACCAC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8242530 152 - 10857215 ATGTTGTGAAGTGTTGTG-TTATTGCTCATTATTTATTCTTATTTGGTCTTATTAAAATTATTCTTAGCATTTGTTAAAGAAAATAATATTCATCATTTAAAGACCAGACGGTTTGATCTAATGAATTTTAATA-ACAC---AGCAAATTAAACCAC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15631774 152 - 23502949 ATATTGTGAAGTGTTGTG-TTATCTCTCATTATTTATTCTTATTGGGTCTTATTAAAATTATTCTTAGCAATTGTTAAAGAAAATAGTATTCATCATTTAAAGACCAGACGGTTCAATCTAATGAATTTTAATA-ATAC---AACAAATTAAACCAC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169914694 137 + 171630274 ATATTATGACGTGTTGTG-TAATTTCTCCTGATTTATTCTTATTGGGTCTTGTTAAAGTTATTCTTAGCGCTTGCTAAAGAAAATAATATTTATCATTTAAAGACCAGGCGGTTTAATCTAAT-------------CAC------AAGTTAAACCAG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1316373 149 - 2905041 ATATTATGAAGCGTTGTG-TTATTTCTCCTGGTTTACTCTTATTGGGTCTTGTTAAAGTCATTCTTAGCGCTTGCTAAAGAGAGTAATATTTATCATTTAAAGACCAGGCGGTTTAATCTAACGAATTTTAGCA-ACAC------AGGTTCAACCCC i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1279346 149 - 2164891 ATATTATGAAGTGTAGTG-TTATTTCTCCTGATTTATTCTTATTGGGTCTTGTTAAAGTTATTCTTAGCCCTTGCTAAAGAAAATAATATTCATCATTTAAAGACCAGGAGGTTTAATCTAATGAATTTTAAGA-ACAC------AAGTTAAACCAC i cebCap1.NW_016107695v1 C 0 I 16 s aotNan1.NW_018494782v1 1526824 149 - 1813869 ATATTATGAAGTGTTGTT-TTATTTCTCCTGATTTATTCTTATTGGGTCTTGTTAAAGTTATTCTTAGCGCTTGCTAAAGAAAATAATATTTATCATTTAAAGACCAGGCAGTTTAATCTAATGAATTTTAACA-ACAC------AAGTTAAACCAC i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10970400 128 - 12073884 ATATTACAAAGTGTTGTG-TTATTTCTCCTTACTTATTCTCATTAGGTTGTATTAAAATCATTCCTGGCATGTGTTAAAGAAAG-----TTCATCTCTTAGAGACCAGGTGGGTCAATCCATTGG----------------------GTCAAACCA- i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56194689 150 + 122678785 AGA-GACAAAGTGTTTTATTTTTTTCTCTTCCTTCAGCCTCCTTGAACCGTATTGAAATCGTCTTTGCCATTTGCTAAAGAAAAAAAAAATCATTATTTAAATACCAGGCAG-TCAGTCTAATGGATTTTAGTGCATCC---AACAAATGCAGGG-- i canFam3.chr1 C 0 I 1 s dasNov3.JH569188 594208 118 + 760995 ATATTAT-AAGGATTTTA-TTATTTCTCCTTATTTGTCCTCTTTGGCCATCATTAAAA-----------------------------------TCATTTAAAGGCCAGATGATTCGATCTAATGAATTTTAATA-ACGTACAACCAAATTTAGTGT- i dasNov3.JH569188 I 1337 C 0 a score=116327.000000 s hg38.chr6_KB021644v2_alt 129313 27 + 185823 GTTTGCCCCATTC-TGTAAACAGCGCTG s panTro5.chr6 173585605 27 + 175400573 GTTTGCCCCATTC-TGTAAACAGCGCTG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171819153 27 + 173848474 GTTTGCCCCATTC-TGTAAACAGCACTG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11501924 27 - 12463322 GTTTGCCCTAGTC-TGTAAACAGCGCTG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156331132 23 + 157873769 GTTTGCCCCATTC-TGTAAACGGC---- i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170356905 27 + 172585720 GTTCACCCCATTC-TGTAAGCGGCGCTG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169102151 27 - 170955103 GTTCACCCCATTC-TGTAAGCGGCGCTG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8388737 27 + 10161646 GTTCACCCCATTC-TGTAAGCGGCGCTG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1420551 27 + 3144229 GTTCACCCCATTC-TGTAAGCGGCGCTG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96706866 27 + 98384682 GTTCGCCCCATTC-TGTAAGCGGCGCTG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8242682 27 - 10857215 GTTCACCCCATTC-TGTAAGCGGCGCTG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15631926 27 - 23502949 GTTCACCCCATTC-TGTAAGCGGCGCTG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169914831 16 + 171630274 ---------TGTC-TGTAAGCGCCCG-- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1316522 16 - 2905041 ---------TGCC-TGTAAGCGGCCG-- i saiBol1.JH378287 C 0 C 0 s aotNan1.NW_018494782v1 1526973 16 - 1813869 ---------TGTC-TGTAAGCGGCCG-- i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10970528 7 - 12073884 ---------------------GGGGCTA i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56194840 26 + 122678785 TTTGGCCTCCTGC-TGT-GGCAGGGCCA i canFam3.chr1 I 1 C 0 s dasNov3.JH569188 594326 28 + 760995 TTTCAATTCATTCTTATGAAAAGTGCTA i dasNov3.JH569188 C 0 C 0 e cebCap1.NW_016107695v1 1279495 16 - 2164891 I a score=2370119.000000 s hg38.chr6_KB021644v2_alt 129340 258 + 185823 CCTGCTTTTCTGTCCTGGCACAGTGTCCAGGCTTGGCCACGAGGGGGCACTTGAAACCTGCCTTTCGGTGCCTGG------------TCGTCGTC-----CCCTGAAGTGA-------AAAGTTGCCCTTCCGGTTATTTCCCTTCCTGTT--TGTCTGCCTCC-GGGGTGTGTGGCTTCAT-TATCAGATCTCAGCAGCTTATGAACTTTAAAAAGGGTAATAAGCC-------CTGTGAAAACCCCCTTTGTGCACGTTTTCAAAAATGTATTTAACATCCAAAAAGAATG s panTro5.chr6 173585632 235 + 175400573 CCTGCTTTTCTGCCCTGGCACAGTGTCCAGGCTTGGCCACGAGGGGGCACTTGAAACCTGCCTTTCGGTGCCTGG------------TCGT-----------------------------------CCTTCCGGTTATTTCCCTTCCTATT--TGTCTGCCTCC-GGGGTGTGTGGCTTCAT-TATCAGATCTCAGAAGCTTATGAACTTTAAAAAGGGTGATAAGCC-------TTGTGAAAACCCCCTGTGTGCACGTTTTCAAAAATGTATTTAACATCCAAAAAGAATG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171819180 258 + 173848474 CCTGCTTTTCTGCCCTGGCACAGTGTCCAGGCTTGGCCACGAGGGGGCACTTGAAACCTGCCTTTCGGTGCCTGG------------TCGTCGTC-----CCCTGAAGTGA-------AAAGTTGCCCTTCCGGTTATTTCCCTTCCTATT--TGTCTGCCTCT-GGGGTGTGTGGCTTCAT-TATCAGATCTCAGAAGCTTATGAACTTTAAAAAGGGTGATAAGCC-------TTGTGAAAACCCCCTTTGTGCATGTTTTCAAAAATGTATTTAACATCCAAAAAGAATG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11501951 258 - 12463322 CCTGCTTTTCTGCCCTGGCACAGTGTCCAGGCTTGGCCACGAGGGGGCACTTGAAACCTGCCTTTCGGTGCCTGG------------TCGTCGTC-----CCCTGAAGTGA-------AAAGTTGCCCTTCCGGTTATTTCCCTTCCTATT--TGTCTGCCTCC-GGGGTGTGTGGCTTCAT-TATCAGATCTCAGAAGCTTATGAACTTTAAAAATGGTGATAAGCC-------CTGTGAAAACCCCCTTTGTGCACGTTTTCAAAAATGTATTTAACATCCAAAAAGAACG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156331155 255 + 157873769 ---GCTCTTCTGCCCTGGCACAGTGTCCATAGTTGGCCACCAGGGGGCACTTGAAACCTGCCTTTCGGTGCCTGG------------TCGTAGTT-----CCCTGAAGTGA-------AAAGTTGCCCTTCCGGTTATTTCCCTTCCTATT--TGTCTGCCTCC-GGGGTGTGTGGCTTCAT-TATCAGATCTCAGAAGCATATGAACTTTAAAAAGTGTAATAAGAC-------CTGTGAAAACCCCCTTTGTTCACGTTTTCAAAAATGTATTTAACATCCAAAAAGAATG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170356932 259 + 172585720 CCTGCCTTTCTGCCCTGGCACAATGTCCAGGTTTGGCCACCAGGGGGCACTTGAAGCCTGCCTTTCGGTGCCTGG------------TCGTCGTT-----CCCTGAAGTGA-------AAAGTTGCCCTTCCGGTTATTTCCCTTCCTGTT--TGTCTGCTTCCTGGGCTGTGTGGCTGCAT-TATCGGATCTCAGAAGCTTATGAACTTTAAAAAGGGTAATAAGCC-------CTGCAAAAACCCCCTTTGTGCACGTTTTCAAAAATGTATTTAACATCCAAAAAGAATG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169102178 259 - 170955103 CCTGCCTTTCTGCCCTGGCACAATGTCCAGGTTTGGCCACCAGGGGGCACTTGAAACCTGCCTTTCGGTGCCTGG------------TCGTCGTT-----CCCTGAAGTGA-------AAAGTTGCCCTTCCGGTTATTTCCCTTCCTGTT--TGTCTGCTTCCTGGGCTGTGTGGCTGCAT-TATCGGATCTCAGAAGCTTATGAACTTTAAAAAGGGTAATAAGCC-------CTGCAAAAACCCCCTTTGTGCACGTTTTCAAAAATGTATTTAACATTCAAAAAGAATG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8388764 259 + 10161646 CCTGCCTTTCTGCCCTGGCACAATGTCCAGGTTTGGCCACCAGGGGGCACTTGAAACCTGCCTTTCGGTGCCTGG------------TCGTCGTT-----CCCTGAAGTGA-------AAAGTTGCCCTTCCGGTTATTTCCCTTCCTGTT--TGTCTGCTTCCTGGGCTGTGTGGCTGCAT-TATCGGATCTCAGAAGCTTATGAACTTTAAAAACGGTAATAAGCC-------CTGCAAAAACCCCCTTTGTGCACGTTTTCAAAAATGTATTTAACATTCAAAAAGAATG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1420578 259 + 3144229 CCTGCCTTTCTGCCCTGGCACAATGTCCAGGTTTGGCCACCAGGGGGCACTTGAAACCTGCCTTTCGGTGCCTGG------------TCGTCGTT-----CCCTGAAGTGA-------AAAGTTGCCCTTCCGGTTATTTCCCTTCCTGTT--TGTCTGCTTCCTGGGATGTGTGGCTGCAT-TATCGGATCTCAGAAGCTTATAAACTTTAAAAAGGGTAATAAACC-------CTGCAAAAACCCCCTTTGTGCACGTTTTCAAAAATGTATTTAACATCCAAAAAGAATG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96706893 259 + 98384682 CCTGCCTTTCTGCCCTGGCACAATGTCCAGGTTTGGCCACCAGGGGGCACTTGAAACCTGCCTTTCGGTGCCTGG------------TCGTCGTT-----CCCTGAAGTGA-------AAAGTTGCCCTTCCGGTTATTTCCCTTCCTGTT--TGTCTGCTTCCTGGGATGTGTGGCTGCAT-TATCAGAACTCGGAAGCTTATGAACTTTAAAAAGGGCAATAAGCC-------CTGCAAAAATCCCCTTTGTGCACGTTTTCAAAAATGTATTTAACATCCAAAAAGAATG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8242709 250 - 10857215 CCTGCCTTTCTGCCCTGG-ACAATGTCCAGGTTTGGCCACCAGGGGGCACTTGAAACCTGCCTTTCGG--------------------CGTCGTT-----CCCTGAAGTGA-------AAAGTTGCCCTTCCGGTTATTTCCCTTCCTGTT--TGTCTGCTTCCTGGGATGTGTGGCTGCAT-TATCGGATCTCAGAAGCTTATGAACTTTAAAAACGGTAATAAACC-------CTGCAAAAACCCCCTTTGTGCACGTTTTCAAAAATGTATTTAACATCCAAAAAGAATG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15631953 255 - 23502949 CCTGCCTTTCTGCCCTGGCACAATGTCCAGGTTTGGCCACCAGGGGGCACTTGAAACCTGCCTTTCGGTGCCTGG------------TCGTCCTT-----CCCTGAAGTGA-------AAAGTTGCCCTTCCGGTTATTTCCCTTCCTGTT------TGCTTCCTGGGATGTGTGGCTGCAT-TATCGGATCTCAGAAGCTTATGAACTTTAAAAAGGGTAATAAGCC-------CTGCAAAAACCCCCTTTGTGCACGTTTTCAAAAATGTATTTAGCATCCAAAAAGAATG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169914847 247 + 171630274 CCTTCCTTTCTGCC--------ATATCCAGGCGTGGCCACCAGGGGGTGCTGGAAACCCGCCTTTCGGCGCCTGG------------TTGTC-TT-----CCCTGGGGTGA-------ACAGTTGCCCTTCCAGTTTTTTCTGTTCCTGTT--TTTCTGCTTTCCAGGGTGTGTGGCTTCCT-GATCAGCTCTCAGAAGAG-ACCAGCTTTAAAAACGGTAATAAGCC-------CTGTGAAAAGCCCC-TCGTGCACGTTTTC-AAAATGTATTTAACATCCGAAAATAATG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1316538 251 - 2905041 CCCGCCTTTCTGCCGT-GCGCAATATCCAGGCGCGGCCACCAGGGGGTGCCGGAAACCCGCCTTTCGGCGCC-GG------------TGGTC-TT-----CCCTGCAGTGA-------ACAGCGGCCCTTCCGGTTGTTTCCGTTCCCGTT--TTTCTGTTTTCCAGGGTGTGTGGCTTCCT-GATCAGATCTCAGAAGGG-ACCAACTTTAAAAACGGTCATAAGCC-------CTGCGAAAAGCCCCTTCATGCACGTTTTC-AAAATATATTTAACATCCAAAAAGA--- i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1279511 254 - 2164891 CCTGCCTTTCTTCCAT-GCACAATATCCAGGCGTGGCCACCAGGGGGTGCTGGAAACCCGCCTTTCAGCGCCGGG------------CTGTC-TT-----CCCTGGAGTGA-------ACAGTTGCCCTTCCGGTTATGTCCGTTCCTG-T--TTCCGGCTTTCCAGGGTGTGTGGCTTCCT-GGTCAGATCTCAGAAGCG-AACAACTTTAAAAAGCGTCATAAGCC-------CTGCGAAAAGCCCCTTCATGCACGTTTTC-AAAATGTATTTAACATCCAAAAAGAATG i cebCap1.NW_016107695v1 I 16 I 738 s aotNan1.NW_018494782v1 1526989 255 - 1813869 CCTGCCTTTCTGACAT-GCACAATGTCCAGGCGTGGCCACCAGGGGGTGCTGGAAACCCGCCTTTCAGCGCCAGG------------TTGTC-TT-----CCCTGGAGTGA-------ACAGTTGCCCTTCCGGTTATTTCCGTGCCTGTT--TTTCTGCTTTCCAGGGTGTGTGGCTTCCT-GATCAGATCTCAGAAGCG-ACCAGCTTTAAAAAGGGTAATAAGCC-------CTGTGAAAAGCCCCTTCGTGCACGTTTTC-AAAATGTATTTAACATCCAAAAAGAATG i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10970535 242 - 12073884 -CTGCCGTCCTGTTCTGGTGCAGTGTCCAAACACTGCCACTGGGAGGAGCTCGAATCCCGTCCTTTGGTCCAGGG------------TCA--GGC-----TCAGGGAGGGT-------GGAAGCGCCCTCT------GTTCACTTTGTTCT--GAGCTGTTGCCCAA---GTGAGGCTTTGC-TGTTATCTCCAGGACACATAAAAACTTTAAAAAGGT---TAAGTA-------CTATGATAATCCTC--TATGCAAGCTCTAAAAAATTTATTTAGTGTCCATAAAAGGTT i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56194866 256 + 122678785 -----CCATCCGCC-TGGTGCAATGGCCATGCTGGTCCACGCGAGGGCACCACACACCAGCATTTCGGGGCATG--------------CAGTGTT-----CTCAGCAGAGGTCGGATTAGAGTTGCTCTTCCAATTGTCTCAGTT--GGTC--TGTTTGCTTCTCCGGGTGC----TTTCAC-TGATATATTCAAGAAACATACAAAGTGATAAAAGGCAAACAGGATGCTACAATAACAATAATCTCCTTTACATACGCTG--AAAAATG-ATTTGCCGTCCAAAAGGGATC i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 594354 273 + 760995 CCTGCCTTTTCGATATGTTGCAATATCCACAATAAACCACCGGAGGGTACTTGAAACCTATCTTTCAGTACCCAGGTTTCTGCTGTCTTGTTATTAGTACCAGTAAAATGA-------GAAGGAACCCTAC-AATTGTTTTAGTTTATATTAAAGTTAGCTTATCCTGATGTGAGGCTTCATACATTGTATGCAAGAAATGCACAAACTGATAAAGGGTTACTAAGGT------ACTATGATAATCCCCTTTATATGTGTTTT------TGAATTTACTATCGAAAAAGGATT i dasNov3.JH569188 C 0 C 0 a score=280172.000000 s hg38.chr6_KB021644v2_alt 129598 37 + 185823 TTATGACACTCA--------CTGTCTCCACGAGTG-AAAAtgtgtg s panTro5.chr6 173585867 37 + 175400573 TTATGACACTCA--------CTGTCTCCACGAGTG-AAAATGTGTG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171819438 37 + 173848474 TTATGACACTCA--------CTGTCTCCACGAGTG-AAAAtgtgtg i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11502209 37 - 12463322 TTATGACACTCA--------CTGTCTCCACGAGTG-AAAAtgtgtg i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156331410 37 + 157873769 TTATGACACTCA--------CTGTCTCCACGAGTG-AAAAAgtgtg i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170357191 37 + 172585720 TTATGACACTCA--------CTGCCTCTACGAGTG-AAAAtgtgtg i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169102437 37 - 170955103 TTATGACACTCA--------CTGCCTCCACGAGTG-AAAAtgtgtg i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8389023 37 + 10161646 TTATGACACTCA--------CTGCCTCCACGAGTG-AAAAtgtgtg i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1420837 33 + 3144229 TTATGA----CA--------CTGCCTCCACGAGTG-AAAAtgtgtg i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96707152 37 + 98384682 TTATGACACTCA--------CTGCCTCCACGAGTG-AAAAtgtggg i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8242959 33 - 10857215 TTATGA----CA--------CTGCCTCCACGAGTG-AAAAtgtgtg i manLeu1.NW_012106474v1 C 0 I 608 s colAng1.NW_012114488v1 15632208 37 - 23502949 TTATGACACTCA--------CTGCCTCCACGAGTG-AAAAtgtgtg i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169915094 34 + 171630274 TTGTGGCACTCC--------CTGCCTC---GAGTG-AAAATATGTG i calJac3.chr4 C 0 I 18 s saiBol1.JH378287 1316789 33 - 2905041 --GGGGCACTCA--------C-GCCTC-AAGAGTG-AAAATATGTG i saiBol1.JH378287 C 0 I 358 s aotNan1.NW_018494782v1 1527244 36 - 1813869 TTATGGCACTCA--------CTGCCTC-AGGAGTG-AAAACGTGTG i aotNan1.NW_018494782v1 C 0 I 580 s otoGar3.GL873575 10970777 46 - 12073884 TGATGAAGCTCATCAAACACCtgtgtgtgcatgtgtatattgtgtg i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56195122 32 + 122678785 TGATGAAGTCCA--------TGATCTCTGTGC----CAAGTGTG-- i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 594627 37 + 760995 TGATAAAATTCA--------TAATTTCTGTGACTG-AAAATATGCA i dasNov3.JH569188 C 0 C 0 e cebCap1.NW_016107695v1 1279765 738 - 2164891 I a score=53967.000000 s hg38.chr6_KB021644v2_alt 129635 19 + 185823 tgcacat-----tgtgtg--------------------------------------------tgtgtg s panTro5.chr6 173585904 24 + 175400573 TGCACatgtgtgcgtgtg--------------------------------------------tgtgcg i panTro5.chr6 C 0 C 0 s panPan2.chr6 171819475 24 + 173848474 tgcacatgtgtgcgtgtg--------------------------------------------tgtatg i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11502246 20 - 12463322 tgcacat----gtgtgcg--------------------------------------------tgtgtg i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156331447 68 + 157873769 tgcacgtgtgtgcgtgtgtgtgcatgtatgtatgcatctgtgtatgcgtgcatgcgtgtgcatgtgtg i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170357228 22 + 172585720 tgcacgt--gtgtgtgtg--------------------------------------------cgtgtg i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169102474 22 - 170955103 tgcacgt--gtgtgtgtg--------------------------------------------cgtgtg i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8389060 22 + 10161646 tgcacgt--gtgtgtgtg--------------------------------------------cgtgtg i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1420870 22 + 3144229 tgcacgt--atgtgtgtg--------------------------------------------catgtg i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96707189 20 + 98384682 tgcacg----tgtgtgtg--------------------------------------------catgtg i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15632245 22 - 23502949 tgcacgt--gtgtgtgtg--------------------------------------------catgtg i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169915146 20 + 171630274 agcatgt----gtgtctg--------------------------------------------tgtgtg i calJac3.chr4 I 18 C 0 s saiBol1.JH378287 1317180 20 - 2905041 tgcatgt----gtgcatg--------------------------------------------tgtgtg i saiBol1.JH378287 I 358 C 0 s otoGar3.GL873575 10970823 20 - 12073884 tgcatcc----atttatg--------------------------------------------tgtgtg i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56195154 6 + 122678785 TGCACA-------------------------------------------------------------- i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 594664 14 + 760995 ----------TATGTATG--------------------------------------------TGTGTA i dasNov3.JH569188 C 0 I 497 e aotNan1.NW_018494782v1 1527280 580 - 1813869 I e cebCap1.NW_016107695v1 1279765 738 - 2164891 I e manLeu1.NW_012106474v1 8242992 608 - 10857215 I a score=74757.000000 s hg38.chr6_KB021644v2_alt 129654 17 + 185823 catgtatgtgtgcatcc s panTro5.chr6 173585928 17 + 175400573 catgtatgtaggcatcc i panTro5.chr6 C 0 C 0 s panPan2.chr6 171819499 1 + 173848474 c---------------- i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11502266 17 - 12463322 catgtatgtatgcatcc i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156331515 17 + 157873769 tatgtatgtatgcatcc i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170357250 17 + 172585720 catatatgtatacatcc i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169102496 17 - 170955103 catatatgtatgcatcc i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8389082 17 + 10161646 catatatgtatgcatcc i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1420892 17 + 3144229 catatatgtatgcatcc i cerAty1.NW_012002071v1 C 0 I 525 s chlSab2.chr13 96707209 17 + 98384682 catatatgtatgcatcc i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15632267 17 - 23502949 catatatgtatgcatcc i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169915166 17 + 171630274 catgcgtgtatgtgtac i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1317200 17 - 2905041 catacatgtgtgagcgt i saiBol1.JH378287 C 0 C 0 s otoGar3.GL873575 10970843 17 - 12073884 catgtgtgtatgtgtga i otoGar3.GL873575 C 0 C 0 e aotNan1.NW_018494782v1 1527280 580 - 1813869 I e cebCap1.NW_016107695v1 1279765 738 - 2164891 I e dasNov3.JH569188 594678 497 + 760995 I e canFam3.chr1 56195160 0 + 122678785 C e manLeu1.NW_012106474v1 8242992 608 - 10857215 I a score=25377.000000 s hg38.chr6_KB021644v2_alt 129671 7 + 185823 atacgtg s panTro5.chr6 173585945 7 + 175400573 atatgtg i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11502283 7 - 12463322 atatgtg i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156331532 7 + 157873769 acatgtg i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170357267 7 + 172585720 gtgtgtg i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169102513 7 - 170955103 gtgtgtg i macFas5.chr4 C 0 I 890 s macNem1.NW_012011000v1 8389099 7 + 10161646 gtgtgtg i macNem1.NW_012011000v1 C 0 C 0 s chlSab2.chr13 96707226 7 + 98384682 gtgtgtg i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15632284 7 - 23502949 gtgtgtg i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169915183 7 + 171630274 atgcgtg i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1317217 7 - 2905041 gtgcctg i saiBol1.JH378287 C 0 C 0 s otoGar3.GL873575 10970860 7 - 12073884 acatgcg i otoGar3.GL873575 C 0 C 0 e aotNan1.NW_018494782v1 1527280 580 - 1813869 I e cebCap1.NW_016107695v1 1279765 738 - 2164891 I e dasNov3.JH569188 594678 497 + 760995 I e canFam3.chr1 56195160 0 + 122678785 C e cerAty1.NW_012002071v1 1420909 525 + 3144229 I e manLeu1.NW_012106474v1 8242992 608 - 10857215 I e panPan2.chr6 171819500 0 + 173848474 C a score=27418.000000 s hg38.chr6_KB021644v2_alt 129678 11 + 185823 tgt----atgtatgt s panTro5.chr6 173585952 15 + 175400573 tgtatgcatgtatgt i panTro5.chr6 C 0 C 0 s panPan2.chr6 171819500 8 + 173848474 -------atgtatgt i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11502290 15 - 12463322 tgtatgcatgtatgt i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156331539 15 + 157873769 tgtgtgcatgtatgt i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170357274 11 + 172585720 ----tgcatgtgtgt i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169103410 11 - 170955103 ----tgtgtgtatgt i macFas5.chr4 I 890 C 0 s macNem1.NW_012011000v1 8389106 11 + 10161646 ----tgcatgtgtgt i macNem1.NW_012011000v1 C 0 C 0 s chlSab2.chr13 96707233 11 + 98384682 ----tgcatgcatgt i chlSab2.chr13 C 0 I 568 s colAng1.NW_012114488v1 15632291 11 - 23502949 ----tgcatgcgtgt i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169915190 5 + 171630274 ----------tgtgt i calJac3.chr4 C 0 I 27 s saiBol1.JH378287 1317224 5 - 2905041 ----------tgtgt i saiBol1.JH378287 C 0 I 1 s otoGar3.GL873575 10970867 11 - 12073884 ----tgtacatgtgc i otoGar3.GL873575 C 0 C 0 e aotNan1.NW_018494782v1 1527280 580 - 1813869 I e cebCap1.NW_016107695v1 1279765 738 - 2164891 I e dasNov3.JH569188 594678 497 + 760995 I e canFam3.chr1 56195160 0 + 122678785 C e cerAty1.NW_012002071v1 1420909 525 + 3144229 I e manLeu1.NW_012106474v1 8242992 608 - 10857215 I a score=14719.000000 s hg38.chr6_KB021644v2_alt 129689 3 + 185823 atg s panTro5.chr6 173585967 3 + 175400573 atg i panTro5.chr6 C 0 C 0 s panPan2.chr6 171819508 3 + 173848474 atg i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11502305 3 - 12463322 atg i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156331554 3 + 157873769 atg i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170357285 3 + 172585720 atg i rheMac8.chr4 C 0 I 806 s macFas5.chr4 169103421 3 - 170955103 atg i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8389117 3 + 10161646 atg i macNem1.NW_012011000v1 C 0 I 584 s colAng1.NW_012114488v1 15632302 3 - 23502949 gcg i colAng1.NW_012114488v1 C 0 I 8 s calJac3.chr4 169915222 3 + 171630274 ATG i calJac3.chr4 I 27 C 0 s saiBol1.JH378287 1317230 2 - 2905041 -tg i saiBol1.JH378287 I 1 C 0 s otoGar3.GL873575 10970878 3 - 12073884 atg i otoGar3.GL873575 C 0 C 0 e aotNan1.NW_018494782v1 1527280 580 - 1813869 I e cebCap1.NW_016107695v1 1279765 738 - 2164891 I e dasNov3.JH569188 594678 497 + 760995 I e canFam3.chr1 56195160 0 + 122678785 C e chlSab2.chr13 96707244 568 + 98384682 I e cerAty1.NW_012002071v1 1420909 525 + 3144229 I e manLeu1.NW_012106474v1 8242992 608 - 10857215 I a score=69134.000000 s hg38.chr6_KB021644v2_alt 129692 45 + 185823 catctgtgtatgtgtg--------------------------catgcatgtgtgtgcg------------------------------------------------------tctgtgtatgtat s panTro5.chr6 173585970 45 + 175400573 catctgtgtatgtgtg--------------------------catgcatgtgtgtgcg------------------------------------------------------tctgtgtatgtat i panTro5.chr6 C 0 C 0 s panPan2.chr6 171819511 43 + 173848474 catctgtgtatgtgtg--------------------------catgcatgtgtgtgcg------------------------------------------------------tctgtgtatgt-- i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11502308 45 - 12463322 catctgtgtatgtgtg--------------------------catgcatgtgtgtgcg------------------------------------------------------tctgtgtatgtat i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156331557 41 + 157873769 catctgtg--tgtgtg--------------------------catgcatgtgtgtgtg--------------------------------------------------------tatgtatgcat i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169103424 43 - 170955103 catccgtg--tgtgtg--------------------------catgtatgtgtgtgca------------------------------------------------------tatgtgtgtgtat i macFas5.chr4 C 0 I 8 s colAng1.NW_012114488v1 15632313 43 - 23502949 catccata--tgtgtg--------------------------cgtgtatgtgtgtgca------------------------------------------------------tgtgtgtatgtat i colAng1.NW_012114488v1 I 8 I 368 s calJac3.chr4 169915225 123 + 171630274 CAtgtgtctgtgtgtacatgtgtctgtgtacacacgtgtgtgcctgcgcatgtgtatgtgtgcatgcatgcatgtctgtgtgtgcatgtgtgcctgtgtgttcatgcatgtgtgtgtgcatgt-- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1317232 41 - 2905041 catgtgtgtatgtgta--------------------------cctgcacgtgtgta--------------------------------------------------------tgtgtgcgtgt-- i saiBol1.JH378287 C 0 C 0 s otoGar3.GL873575 10970881 45 - 12073884 catctatgtgtgtgtc--------------------------catgtgtgtttgtgca------------------------------------------------------tgcatgcatgtgt i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56195160 19 + 122678785 ------------CGTG--------------------------CATGCATGTGTGTGC-------------------------------------------------------------------- i canFam3.chr1 C 0 C 0 e aotNan1.NW_018494782v1 1527280 580 - 1813869 I e cebCap1.NW_016107695v1 1279765 738 - 2164891 I e dasNov3.JH569188 594678 497 + 760995 I e chlSab2.chr13 96707244 568 + 98384682 I e cerAty1.NW_012002071v1 1420909 525 + 3144229 I e manLeu1.NW_012106474v1 8242992 608 - 10857215 I e macNem1.NW_012011000v1 8389120 584 + 10161646 I e rheMac8.chr4 170357288 806 + 172585720 I a score=11435.000000 s hg38.chr6_KB021644v2_alt 129737 39 + 185823 ccatatg------------tgtgtgtatgtgtg--------tgcatgcatgtg----tgtgca s panTro5.chr6 173586015 43 + 175400573 ccatatg------------tgtatgtgtgtgca--------tgcatgtgtgtgtgcatgtgtg i panTro5.chr6 C 0 C 0 s panPan2.chr6 171819554 37 + 173848474 --atgta------------tccgtgtgtgtgta--------tgcatgtgtgtg----catgtg i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11502353 19 - 12463322 ccat----------------------------------------atgtgtgtg----catgtg i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156331598 51 + 157873769 ccatatgtgtgtgtgtggatgtgtgtgtgtgca--------tgcatgtgtgtg----catgtg i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169103475 37 - 170955103 ccatatg------------tgtgtgcgtctatg--------tgtgtgtgcgtg----tatc-- i macFas5.chr4 I 8 C 0 s calJac3.chr4 169915348 47 + 171630274 ctctgtg------------tgtatgtgtgtgtgcatgtatatatgtgtgtatg----ttcaca i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1317273 39 - 2905041 ctctgtg------------tgtatgcgtgtgtg--------tgcatgtgcatg----tttgca i saiBol1.JH378287 C 0 C 0 s otoGar3.GL873575 10970926 39 - 12073884 gtatatg------------tgtgcatgtgtgta--------tgtgtatgcatg----tgtgta i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56195179 11 + 122678785 ----------------------------------------CCACATACGGA------------ i canFam3.chr1 C 0 C 0 e aotNan1.NW_018494782v1 1527280 580 - 1813869 I e cebCap1.NW_016107695v1 1279765 738 - 2164891 I e dasNov3.JH569188 594678 497 + 760995 I e colAng1.NW_012114488v1 15632356 368 - 23502949 I e chlSab2.chr13 96707244 568 + 98384682 I e cerAty1.NW_012002071v1 1420909 525 + 3144229 I e manLeu1.NW_012106474v1 8242992 608 - 10857215 I e macNem1.NW_012011000v1 8389120 584 + 10161646 I e rheMac8.chr4 170357288 806 + 172585720 I a score=235965.000000 s hg38.chr6_KB021644v2_alt 129776 47 + 185823 tgtgtgtgcacgtgcatc--gcttgcatgttttcttgtgtgtgcatatc s panTro5.chr6 173586058 47 + 175400573 tgtgtgtgCACGTGCATC--ACGTGCATGTTTTCTtgtgtgtgcatgtc i panTro5.chr6 C 0 I 8 s panPan2.chr6 171819591 47 + 173848474 tgtgtgtgcacatgcatc--gcgtgcatgttttcttgtgtgtgcatgtc i panPan2.chr6 C 0 I 2 s gorGor5.CYUI01015032v1 11502372 47 - 12463322 tgtgtgtgcacgtgcatc--gcgtgcatgttttcttgtgtgtgcatgtc i gorGor5.CYUI01015032v1 C 0 I 2 s nomLeu3.chr3 156331649 47 + 157873769 tgtgcacacacgtgcatc--acgtgcatgttttcgtgtgcgtgcatgtc i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170358094 47 + 172585720 tgtgtgtacacgtgcata--gcgtgcatgtttttgtgtgcttgcatgtc i rheMac8.chr4 I 806 C 0 s macFas5.chr4 169103512 47 - 170955103 tgtgtgtacacgtgcata--gcgtgcatgtttttgtgtgcttgcatgtc i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8389704 47 + 10161646 tgtgtgtacacgtgcata--gcgtgcatgtttttgtgtgcttgcatgtc i macNem1.NW_012011000v1 I 584 C 0 s cerAty1.NW_012002071v1 1421434 47 + 3144229 tgtgtgtacacatgcata--gcacgcatgtttttgtgtgcttgcatgtc i cerAty1.NW_012002071v1 I 525 I 2 s chlSab2.chr13 96707812 47 + 98384682 tgtgtgtacacatgcata--gcgcacatgtttttgtgtgcttgcatgtc i chlSab2.chr13 I 568 C 0 s colAng1.NW_012114488v1 15632724 46 - 23502949 tgtgtgtacacatgcata--gcatgcatgttttt-tgtgcttgcgtgtc i colAng1.NW_012114488v1 I 368 C 0 s calJac3.chr4 169915395 49 + 171630274 tgtatgtgtgtTTGCATATGGCATGCATGTTTTCCtgtgcatgcatgtc i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1317312 47 - 2905041 tgtatgtgtgtttgcatgtggcgtgc--gttttcctgtgcatgcatgtc i saiBol1.JH378287 C 0 C 0 s otoGar3.GL873575 10970965 42 - 12073884 tgtatgtccatgtgtat---gtgtgcatgt----gtgtgtgtgcatatg i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56195190 3 + 122678785 ----------------------------------------------ACC i canFam3.chr1 C 0 C 0 e aotNan1.NW_018494782v1 1527280 580 - 1813869 I e cebCap1.NW_016107695v1 1279765 738 - 2164891 I e dasNov3.JH569188 594678 497 + 760995 I e manLeu1.NW_012106474v1 8242992 608 - 10857215 I a score=56379.000000 s hg38.chr6_KB021644v2_alt 129823 6 + 185823 tgtgtg s panTro5.chr6 173586113 6 + 175400573 tgtgtg i panTro5.chr6 I 8 C 0 s panPan2.chr6 171819640 6 + 173848474 tgtgtg i panPan2.chr6 I 2 C 0 s gorGor5.CYUI01015032v1 11502421 6 - 12463322 tgtgtg i gorGor5.CYUI01015032v1 I 2 C 0 s nomLeu3.chr3 156331696 6 + 157873769 tgtgtg i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170358141 6 + 172585720 tgtgtg i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169103559 6 - 170955103 tgtgtg i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8389751 6 + 10161646 tgtgtg i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1421483 6 + 3144229 tgtgtg i cerAty1.NW_012002071v1 I 2 C 0 s chlSab2.chr13 96707859 6 + 98384682 tgtatg i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8243600 6 - 10857215 tgtgtg i manLeu1.NW_012106474v1 I 608 C 0 s colAng1.NW_012114488v1 15632770 6 - 23502949 tgtgtg i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169915444 6 + 171630274 tgcatg i calJac3.chr4 C 0 I 10 s saiBol1.JH378287 1317359 6 - 2905041 tgtgtg i saiBol1.JH378287 C 0 I 6 s otoGar3.GL873575 10971007 6 - 12073884 tgtgca i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56195193 6 + 122678785 TGTGAG i canFam3.chr1 C 0 C 0 e aotNan1.NW_018494782v1 1527280 580 - 1813869 I e cebCap1.NW_016107695v1 1279765 738 - 2164891 I e dasNov3.JH569188 594678 497 + 760995 I a score=150932.000000 s hg38.chr6_KB021644v2_alt 129829 13 + 185823 tgtgtgtgtgtgt s panTro5.chr6 173586119 13 + 175400573 tgtgtgtgtgtgt i panTro5.chr6 C 0 C 0 s panPan2.chr6 171819646 13 + 173848474 tgtgtatgtgtgt i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11502427 13 - 12463322 tgtgtgtgtgtgt i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156331702 13 + 157873769 tgtatgtgtgtgt i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170358147 13 + 172585720 tgtgtatgtgtgt i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169103565 13 - 170955103 tgtgtatgtgtgt i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8389757 13 + 10161646 tgtgtatgtgagt i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1421489 13 + 3144229 tgtgtatgtgtgt i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96707865 13 + 98384682 tgtgtatgtgtgt i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8243606 13 - 10857215 tgtgtatgtgtgt i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15632776 13 - 23502949 tgtgtatgtgtgt i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169915460 13 + 171630274 tgtgtgtgtgtgt i calJac3.chr4 I 10 C 0 s saiBol1.JH378287 1317371 13 - 2905041 tgtgtgtgtgtgt i saiBol1.JH378287 I 6 C 0 s cebCap1.NW_016107695v1 1280503 13 - 2164891 tgtgtgtgtgtgt i cebCap1.NW_016107695v1 I 738 C 0 s aotNan1.NW_018494782v1 1527860 13 - 1813869 TGTGTGTGTGTGT i aotNan1.NW_018494782v1 I 580 C 0 s otoGar3.GL873575 10971013 13 - 12073884 tgtgtgtatgtgt i otoGar3.GL873575 C 0 I 404 e dasNov3.JH569188 594678 497 + 760995 I e canFam3.chr1 56195199 0 + 122678785 C a score=1788505.000000 s hg38.chr6_KB021644v2_alt 129842 190 + 185823 CCCGGATAAATAAGCCATCAACTAAGAAGGAAACAGGCTGGCCTTTGTCTAGGGCCTGCCTTAC--ATCTGCCGGAGTCCAAAGTCCA-CAATTCTTCC-CTTTCGATTTCTGCCTTTTCCATAACTGGCACTGACCAGCAGAAACAGAAA------TGTGTTGTGAGGTCACCACCATCACCTTTCTGCTCATCCACAC- s panTro5.chr6 173586132 189 + 175400573 CCCGGATAAATAAGCCATCAACTAAGAAGGAAACAGGCTGGCCTTTGTCTAGGGCCTGCCTTAC--ATCTGCCGGAGTCC-AAGTCCA-CAATTCTTCC-CTTTCGATTTCTGCCTTTTCCATAACTGGCACTGACCAGCAGAAACAGAAA------TGTGTTGTGAGGTCACCACCATCACCTTTCTGCTCATCCACAC- i panTro5.chr6 C 0 C 0 s panPan2.chr6 171819659 189 + 173848474 CCCGGATAAATAAGCCATCAACTAAGAAGGAAACAGGCTGGCCTTTGTCTAGGGCCTGCCTTAC--ATCTGCCGGAGTCC-AAGTCCA-CAATTCTTCC-CTTTCGATTTCTGCCTTTTCCATAACTGGCACTGACCAGCAGAAACAGAAG------TGTGTTGTGAGGTCACCACCATCACCTTTCTGCTCATCCACAC- i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11502440 190 - 12463322 CCCGGATAGATAAGCCATCAACTAAGAAGGAAACAGGCTGGCCTTTGTCTAGGGCCTGCCTTAC--ATCTGCCGGAGTCCAAAGTCCA-CAATTCTTCC-CTTTCGATTTCTGCCTTTTCCATAACTGGCACTGACCAGCAGAAACAGAAA------TGTGTTGTGAGGTCACCACCATCACCTTTCTGCTCATCCACAC- i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156331715 186 + 157873769 CCC----AGATAAGCCATCAACTAAGAAGGAAATAGGCTGGCCTTTGTCTAGGGCCTGCCTTAC--GTCTGCCGGAGTCCAAAGCCCA-CAATTCTTCC-CTTTCGATTTCTGCCTTTTCTGTAACTGGCACCGACCAGCAGAAACAGAAA------TGTGTTGTGAGGTCACCACCATCACCTTTCTGCTCGTCCACAC- i nomLeu3.chr3 C 0 M 279 s rheMac8.chr4 170358160 186 + 172585720 CCC----AGATAAGCCATCAACTAAGAAGAAAACAGGCTGGCCGTTGTCTAGGGCCTGCCTTAT--ATCTGCCAGAGTCCAGAGCCCA-TAATTCTTCC-CTTTAGATTTCTGCCTTTTCCACAACTGGCACTGACCAGCAGAAACAGAAA------TGTGTTGTTAGGTCACCACCATCACCTTTCTGCTTGTCCACGC- i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169103578 186 - 170955103 CCC----AGATAAGCCATCAACTAAGAAGAAAACAGGCTGGCCGTTGTCTAGGGCCTGCCTTAT--ATCTGCCAGAGTCCAGAGCCCA-TAATTCTTCC-CTTTAGATTTCTGCCTTTTCCACAACTGGCACTGACCAGCAGAAACAGAAA------TGTGTTGTTAGGTCACCACCATCACCTTTCTGCTCGTCCACGC- i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8389770 186 + 10161646 CCC----AGATAAGCCATCAACTAAGAAGAAAACAGGCTGGCCGTTGTCTAGGGCCTGCCTTAT--ATCTGCCAGAGTCCAGAGCCCA-TAATTCTTCC-CTTTAGATTTCTGCCTTTTCCACAACTGGCACTGACCAGCAGAAACAGAAA------TGTGTTGTTAGGTCACCACCATCACCTTTCTGCTCGTCCACGT- i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1421502 186 + 3144229 CCC----AGATAAGACATCAACTAAGAAGAAAACAGGCTGGCCTTTGTCTAGGGCCTGCCTTAT--ATCTGCCAGAGTCCAGAGCCCA-TAATTCTTCC-CTTTAGATTTCTGCCTTTTCCACAACTGGCACTGACCAGCAGAAACAGAAA------TGTGTTGTTAGGTCACCACCATCACCTTTCTACTCGTCCATGC- i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96707878 186 + 98384682 CCC----AGATAAGCCCTCAACTAAGAAGAAAACAGGCTGGCCTTTGTCTAGGGCCTGCCTTAT--ATCTGCCAGAGTCCAAAACCCA-TAATTCTTCC-CTTTAGATTTCTGCCTTTTCCGCAACTGGCACCGACCAGCAGAAACAGAAA------TGTGTTGTTAGGTCACCACCATCACCTTTCTGCGGGTCCACGC- i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8243619 186 - 10857215 CCC----AGATAAGACATCAACTAAGAAGAAAACAGGCTGGCCTTTGTCTAGGGCCTGCCTTAT--ATCTGCCAGAGTCCAGAGCCCA-TAATTCTTCC-CTTTAGATTTCTGCCTTTTCCACAACTGGCACTGACCAGCAGAAACAGAAA------TGTGTTGTTAGGTCACCACCATCACCTTTCTACTCGTCCACGC- i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15632789 186 - 23502949 CCC----AGATAATCCATCAACTAAGAAGAAGATAGGCTGGCCTTTGTCTAGGGCCTGCCTTAT--ATCTGCTGGAGTCCAAAGCCCA-TAATTCTTCC-CTTTAGATTTCTGCCTTTTCCACAACTGGCACCGACCAGCAGAAAGAGAAA------CATGTTGTTAGGTCACCACCATCACCTTTCTGCTCGTCCACGC- i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169915473 185 + 171630274 CCTAGATGCATAAGCCATCAACCAGGA-------AGGCTGGCGTTTGTCTAGGGCCTGCCTTACCTCTCTGCAGGTGTCGAAAGCCCA-CAATTCTTCC-CTTTAGGTTCCTGCCTTTTCCATGACTGGCACCAGCCAGCAGAAACAAAAA------TGTGCTGTTATCTCACCGCCACCACCTTTCTGCTTGTCCACAC- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1317384 182 - 2905041 CCTAGATGCATAAGCCATCAACCAAGAAGGAAACAGGCTGGCCTTTGTCTAGGGCCTGCCTTAC--CTCTGCTGGCGTCCAAAGCCCA-CAATTCTTCC-CTTTAGGTTCCTGCCTTTTCTATAACTGGCACCAGCCAGC--------ACA------TGTGCTGTTAGCTCACCACCATCACCTTTCTGCCTGTCCACAC- i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1280516 182 - 2164891 CCTAGTTGCATAAGCCATCAACCAAGAAGGAAACAGGCTGGCCTTTGTCTAGGGGCTGCCTTAC--CTCTGCTGGCGTCCAAAGCCCA-CAATTCTTCC-CTTTAGGTTCCTGCCTTTTCCATAACTGGCACCAGCCAGC--------AAA------TGTGCTGTTAGCTCACCACCTTCACCTTTCTGCTTGTCCACAC- i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1527873 189 - 1813869 CCTAGATGCATAAGCCATTAACCA-GAAGGAAACAGGCTGGCCTTTGTCTAGGGCCTGCCTTAC--CTCTGCTGGCGTCCAAAGCCCA-CAATTCTTCC-CTTTAGATTCCTGCCTTTTCCATAACTGGCACCAGGCAGCAGAAACAAAAA------TGTGCTGTTAGCTCACCGCCATCACCTTTCTGCTTGTCCACAC- i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10971430 190 - 12073884 CCCTAATAAATAGACCCTCAG-TAAGAAGAAGG-AGGCTGGCC-TGGGGTAGGGCCTGCCCTGG--CTCCTCT---GTCCTCTGCACAGCTACCCTGCCACTCCAGAATTCTGCCTTTTCCATAAAAAGTACCAGCTATCAGAATAAAAAACCACCTTGTGGTGTTAGATCA-AAGAGTCATGTTTC-ACTCATCTACAA- i otoGar3.GL873575 I 404 I 1 s canFam3.chr1 56195199 146 + 122678785 ------------------------GAAAGGAAGCAGGCTGGCATTTCTGCAGGGCCTGACTTGC--GGCTG------------GTCTG------CTGGC-CTCTGAA-----ACCTTTTCTGTAACAGG----GACGAGCAGATCCAAAAT-TACACTGCGCTGTTAGAGCAAAACCATGACATTTCTGCTTGTCAACAAC i canFam3.chr1 C 0 C 0 e dasNov3.JH569188 594678 497 + 760995 I a score=119455.000000 s hg38.chr6_KB021644v2_alt 130032 17 + 185823 GTGTGCTGGGGTCTGCT s panTro5.chr6 173586321 17 + 175400573 GTGTGCTGGGGTCTGCT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171819848 17 + 173848474 GTGTGCTGGGGTCTGCT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11502630 17 - 12463322 GTGTGCTGGGGTCTGCT i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170358346 17 + 172585720 GTATGTTAGGGTCTGCT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169103764 17 - 170955103 GTATGTTAGGGTCTGCT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8389956 17 + 10161646 GTATGTTAGGTTCTGCT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1421688 17 + 3144229 GTATGTTAGGGTCTGCT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96708064 17 + 98384682 GTATGTTAGGGTCTGCT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8243805 17 - 10857215 GTATGTTAGGGTCTGCT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15632975 17 - 23502949 GTATGTTAGGGTCTGCT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169915658 17 + 171630274 GTGTGTTCAGCTCGGCT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1317566 17 - 2905041 GTGTGTTCAGGTCACCT i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1280698 17 - 2164891 GTGTGTTcaggtcggct i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1528062 17 - 1813869 GTGTGTTcaggtcggct i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10971621 17 - 12073884 ATACACACTGGTCTGCC i otoGar3.GL873575 I 1 C 0 s canFam3.chr1 56195345 12 + 122678785 ATATATCCTGAT----- i canFam3.chr1 C 0 C 0 e dasNov3.JH569188 594678 497 + 760995 I e nomLeu3.chr3 156331901 279 + 157873769 M a score=803233.000000 s hg38.chr6_KB021644v2_alt 130049 102 + 185823 GCCGGCAGCGGTGTGGCAGGACTCGGCGGTCTCTTGTGCAGGTCTGCGTC------TCAGATGAATGAggatgaagttttgattagatgcc------------------------------ctctccgttccctgaaa- s panTro5.chr6 173586338 102 + 175400573 GCCGGCAGCGGTGTGGCAGGACTCGGAGGTCTCTTGTGCAGGCCTGCGTC------TCAGATGAATGAGGATGAAGTTTTGATTAGATGCC------------------------------CTCTCCGTTCCCTGAAA- i panTro5.chr6 C 0 C 0 s panPan2.chr6 171819865 102 + 173848474 GCCGGCAGCGGTGTGGCAGGACTCGGAGGTCTCTTGTGCAGGTCTGCGTC------TCAGATGAATGAggatgaagttttgattagatgcc------------------------------ctctccgttccctgaaa- i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11502647 102 - 12463322 GCCGGCAGCGGTGTGGCAGGACTCGGCGGTCTCTTGTGCGGGTCTGCGTC------TCAGATGAATGAGGATGAAGTTTTGATTAGATGCT------------------------------CTCTCCGTTCCCTGAAA- i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170358363 102 + 172585720 GCTGGCAGTGGTGTGGCAGGACGGGGCCGTCACTTGTGCAGGTCTGTGTC------TCAGATGAACGAGGGTGAAGTTTTGATTAGCTGCC------------------------------CTCTCCATTCCCTGAAA- i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169103781 102 - 170955103 GCTGGCAGTGGTGTGGCAGGACGGGGCCGTCACTTGTGCAGGTCTGCGTC------TCAGATGAACGAGGGTGAAGTTTTGATTAGGTGCC------------------------------CTCTCCATTCCCTGAAA- i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8389973 102 + 10161646 GCTGGCAGTGGTGTGGCAGGACGGGGCCGTCACTTGTGCAGGTCTGCGTC------TCAGATGAACGAGGGTGAAGTTTTGATTAGGTGCC------------------------------CTCTCCATTCCCTGAAA- i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1421705 102 + 3144229 GCTGGCAGTGGTGTGGAAGGACAGGGCCATCACTTGTGTAGGTCTGCGTC------TCAGATGAACGAGGGTGAAGTTTTGATTAGGTGCC------------------------------CTCTCCATTCCCTGAAA- i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96708081 102 + 98384682 GCTGGCAGTGGTGTGGCAGGATGGGGCCGTCACTTGTGCAGGTCTGCGTC------TCAGATGAACGAGGGTGAAGTTCTGATTAGGTGCC------------------------------CTCTCCATTCCCTGAAA- i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8243822 102 - 10857215 GCTGGCAGTGGTGTGGAAGGACAGGGCCGTCACTTGTGCAGGTCTGTGTC------TCAGATGAACGAGGGTGAAGTTTTGATTAGGTGCC------------------------------CTCTCCATTCCCTGAAA- i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15632992 102 - 23502949 GCTGGCAGTGGTGTGGCAGGACAGGACTGTCACTTGTGCAGGTCTGCATC------TCAGATGAACGAGGGCGAAATTTTGATTAGATGCC------------------------------CTCTCCATTCCCTGAAA- i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169915675 108 + 171630274 GCTGGCAGTGCTGTGGCAGGGCAGGGCGGTCACTTATGCAGGTCTGCGTCTCCTTATCGGATGAATGAGGACAAAGCTTTGCTCCGATGCC------------------------------CTCTCAGTTCCCTGAAA- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1317583 108 - 2905041 ACTGGCAGCGGTGTGGCAGGACAGGGCGGTCACTTATGCAGGTCTGCGTCTCCTTATCAGATGAATGAGGACAAAGCTTTGCTTAGAAGCC------------------------------CTCTCAATTCCCTGAAA- i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1280715 108 - 2164891 gctggcagcggtgtggcaggacagggcagtcacttatgcaggtctgcgtctccttatcagatgaataaggacaaagctttgcctagatgcc------------------------------ctctcaattccctGAAA- i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1528079 108 - 1813869 gctggcagcggtgtggcaggacagggcagtcacttacgcaggtctccatctccttatcggatgaatgaggacaaagctttgcttagatgcc------------------------------ctctcaattccctGAAA- i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10971638 103 - 12073884 CC---CACCCGTGAGGAAATACGGAGGGG-CACTTGCCCTATTCTGCGTTTCCTTCTCAGATAAACAATGGTGAACTTCTGAGTAG-CGTT------------------------------CCCCCAATTCCCTGTAA- i otoGar3.GL873575 C 0 I 156 s canFam3.chr1 56195357 57 + 122678785 -------------------------GCAATTACTTATACAAGTGTGCCCTTGCTTCTCTGATGAG-------GAAGTTTGAATCATGTT-------------------------------------------------- i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 595175 130 + 760995 gcagacaacggcggggggggggggggcgggggagggtggaag---gggag------agaaataaataaagagtaaatcttaaaaaaAAACCAAAAAACAAAACAAGGATGAATGCAAACTGCTCTCAATTCCCTATAAA i dasNov3.JH569188 I 497 C 0 e nomLeu3.chr3 156331901 279 + 157873769 M a score=553495.000000 s hg38.chr6_KB021644v2_alt 130151 93 + 185823 ctctggaattctAGGCCTG-------T---CTCTTTTTcctgcttccttccctcccttcc-tgctttcttctcttccttctttcttttctctccccatcccacc------------------------------------ s panTro5.chr6 173586440 93 + 175400573 CTCTGGAATTCTAGGCCTG-------T---CTCTTTTTcctgcttccttccctcccttcc-tgctttcttctcttccttctttcttttctctccccatcccacc------------------------------------ i panTro5.chr6 C 0 C 0 s panPan2.chr6 171819967 93 + 173848474 ctctggaattctAGGCCTG-------T---CTCTTTTTcctgcttccttccctcccttcc-tgctttcttctcttccttctttcttttctctccccatcccacc------------------------------------ i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11502749 93 - 12463322 CTCTGGAATTCTAGGCCTG-------T---CTCTTTTTcctgcgtccttccctcccttcc-tgctttcttctcttccttctttcttttctctccccatccctcc------------------------------------ i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170358465 82 + 172585720 CTCTGGAATTCTAGGCCTG-------T---Ctctt-----------ccttcttccctccc-tgcttgcttctctcccttctttcttttcTCTCCCCATCCCACC------------------------------------ i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169103883 82 - 170955103 CTCTGGAATTCTAGGCCTG-------T---CTctt-----------ccttcttccctccc-tgcttgcttctctcccttctttcttttctctccCCATCCCACC------------------------------------ i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8390075 82 + 10161646 CTCTGGAATTCTAGGCCTG-------T---Ctctt-----------ccttcttccctccc-tgcttgcttctctcccttctttcttttcTCTCCCCATCCCACC------------------------------------ i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1421807 82 + 3144229 CTCTGGAATTCTAGGCCTG-------T---Ctctt-----------ccttcttccctccc-tgcttgcttctctcccttctttcttttcTCTCCCCATCCCACC------------------------------------ i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96708183 82 + 98384682 CTCTGGAATTCTAGGCCTG-------T---Ctctt-----------ccttcttccctccc-tgctttcttctctcccttcttacttttcTCTCCCCATCCCACC------------------------------------ i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8243924 82 - 10857215 CTCTGGAATTCTAGGCCTG-------T---CTctt-----------ccttcttccctccc-tgcttgcttctctcccttctttcttttctctccCCATCCCACC------------------------------------ i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15633094 85 - 23502949 CTCTGGAATTCTAGGCCTG-------TGtcttctt-----------ccttcttccctccc-tgctttcttctctaccttctttcttttctctCCCCATCCCACC------------------------------------ i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169915783 79 + 171630274 --CTGGAAATC---GCTTG-------T---TTCTTcttcctccctccctc----ccttcc-tcctttcttcactcccttcttcctcctctctccccatc----------------------------------------- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1317691 80 - 2905041 CTCTGGAAATC---GCtcg-------t---ttcttcttccttcttccctccct-ccttcg-tcctttcttcgcttccttcttcctcctct----gcatc----------------------------------------- i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1280823 81 - 2164891 CTCTGGAAATC---Gctcg-------t---ttcttcttccttcttccctccctcccttcc-tcctttcttcacttccttcttcctccttt----ccatc----------------------------------------- i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1528187 85 - 1813869 CTCTGGAAATC---ACTTG-------c---ttcttcttccttcttccctccctcctttcc-tcctttcttcactcccttcttcctcctctctcctcatc----------------------------------------- i aotNan1.NW_018494782v1 C 0 C 0 s canFam3.chr1 56195414 59 + 122678785 CTCTGGAATTCCAGGCCTG-------C---CTCCC----------------------------------CCACTCCCTTCCTCCCTAGCTGCCTTCACCACAC------------------------------------- i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 595305 135 + 760995 TTCAATAATTCTAGGTCTGCTGttcct---ttcttcttttctgtcccctctctcccttcctttctttcttttctt--ttctttcttttcttttcttatctattcttttttccctttctttctctctttctctctttctct i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10971741 156 - 12073884 I e nomLeu3.chr3 156331901 279 + 157873769 M a score=1661321.000000 s hg38.chr6_KB021644v2_alt 130244 182 + 185823 ctcccttttccctttttctcccccatc-----cctttactccctAA-----------------ATGAGTGTCTGAGGGGCC------GACCACAGTGCCGTG----CTGTGTCCTCTGCGAGTGTGTATTCAGAACTACA--AGAAATCACTTTGTTCCTT----C---TCCTGTGTACTCACGGAACTTGATTCTTGCCCTGAGAAGAAGGCAGG---AACCGGA s panTro5.chr6 173586533 182 + 175400573 ctcccttttccctttttctcccccatc-----cctttactccctAA-----------------ATGAGTGTCTGAGGGGCC------GACCACAGTGCCGTG----CTGTGTCCTTTGGGAGTGTGTATTCAGAACTACA--AGAAATCACTCTGTTCCTT----C---TCCTGTGTACTCACGGGACTTGATTCTTGCCCTGAGAAGAAGGCAGG---AACCGGA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171820060 182 + 173848474 ctcccttttccctttttctcccccatc-----cctttactccctAA-----------------ATGAGTGTCTGAGGGGCC------GACCACAGTGCCGTG----CTGTGTCCTTTGGGAGTGTGTATTCAGAACTACA--AGAAATCACTCTGTTCCTT----C---TCCTGTGTACTCACGGGACTTGATTCTTGCCCTGAGAAGAAGGCAGG---AACCGGA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11502842 179 - 12463322 ctcccttttccctttttctcccctacc-----cctttactccctAA-----------------ATGAGTGTCTGAGGGGCC------GACCACAGTGCCGTG----CTGTGTCCTTTGGGAGTGTGTATTCAGAACTACA--AGAAATCACTCTGTTCCTT----------CTGTGTACTCACGGAACTTGATTCTTGCCATGAGAAGAAGGCAGG---AACCGGA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156332180 186 + 157873769 CTCCCTTTTCCCTTTTTCTCCCCCGTC-----CCTTTACTCCCTAC-----------------ATAATTATCTGAGGTGCT------GACCGCATTGCCGTACTCTCTGTGTCCTTTGGAATGGTGTATTCTGAACTATA--CTAAATCACTCCGTCCCTT----C---TCCTGCTTACTCACGGGCCTTGATTCCTGCCATGGGAAGAAGGACCG---AACTGGA i nomLeu3.chr3 M 279 C 0 s rheMac8.chr4 170358547 184 + 172585720 ATCCCTTTTCCCTTTTTCTCCCCCTTC-----CCTTTACTCCCTAA-----------------ATAAGTGTCTGAGGTACC------GACCACAACACCATGCTCCCTGTGTCCTTTGGGA--ATGTATTCAGAACTACA--AGAAATCACTCCGTTCCTT----C---TCCTGCGTACTCACTGGCCTTGATTCTTGCCATGGGAAGAAGGAAGG---AACTGGA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169103965 184 - 170955103 ATCCCTTTTCCCTTTTTCTCCCCCTTC-----CCTTTACTCCCTAA-----------------ATAAGTGTCTGAGGTACC------GACCACAACACCATGCTCCCTGTGTCCTTTGGGA--GTGTATTCAGAACTACA--AGAAATCACTCCGTTCCTT----C---TCCTGCGTGCTCACTGGCCTTGATTCTTGCCATGGGAAGAAGGAAGG---AACTGGA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8390157 184 + 10161646 ATCCCTTTTCCCTTTTTCTCCCCCTTC-----CCTTTACTCCCTAA-----------------ATAAGTGTCTGAGGTACT------GACCACAACACCATGCTCCCTGTGTCCTTTGGGA--GTGTATTCAGAACTACA--AGAAATCACTCCGTTCCTT----C---TCCTGCGTGCTCACTGGCCTTGATTCTTGCCATGGGAAGAAGGCAGG---AACTGGA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1421889 184 + 3144229 ATCCCTTTTCCCTTTTTCTCCCCCTTC-----CCTTTACTCCCTAA-----------------ATAAGTGTCTGAGGTACC------GACCACAACACCATGCTCCCTGTGTCCTTTGGGA--GTGTATTCAGAACTACA--AGAAATCACTCCGTTCCTT----C---TCCTGCGTGCTCACTGGCCTTGATTCTTGCCATGGGAAGAAGGCAGG---AACTGGA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96708265 184 + 98384682 ATCCCTTTTCCCTTTTTCTCCCCCTTC-----CCTTTACTCCCTAA-----------------ATAAGTATCTGAGGTACC------GACCACAACACCATGCTCCCTGTGTCCTTTGGGA--GTGTATTCAGAACTACA--AGAAATCACTCCATTCCTT----C---TCCTGTGTGCTCACTGGCCTTGATTCTTGCCATGGGAAGAAGGCAGG---AACTGGA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8244006 184 - 10857215 ATCCCTTTTCCCTTTTTCTCCCCCTTC-----CCTTTACTCCCTAA-----------------ATAAGTGTCTGAGGTACT------GACCACAACATCATGCTCTCTGTGTCCTTTGGGA--GTGTATTCAGAACTACA--AGAAATCACTCCGTTCCTT----C---TCCTGCGTGCTCACTGGCCTTGATTCTTGCCATGGGAAGAAGGCAGG---AACTGGA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15633179 186 - 23502949 ATCCCTTTTCCCTTTTTCTCCCCCTTC-----CCTTTACTCCCTAA-----------------ATAAGCATCTGAGGTACC------AACCACAACACCATGCTCCCTGTGTCCTTTGGGAGTGTGTATTCAGAACTACA--AGAAATCACTCCATTCCTT----C---TCCTGCGTACTCACTGGCCTTGACTCTTGCCATGGGAAGAAGGCAGG---AACTGGT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169915862 183 + 171630274 cTCCTTTTCCTCTTTTTCTCCCCAATC-----CCTTTACTCTCTGA-----------------ATAAGTAATTGAGGTGCC------AACCACAG-GCTGAGCACTCTGTGTCCTTCGGGAGTGTGTCTTCAGAACTGTG--AGAAATCA--CTGTTCCTT----C---TCCTGCACAGTCATGGGCCTTGACACTTGCCATGGGAAGAAGGTCGG---AACTGGA i calJac3.chr4 C 0 I 137 s saiBol1.JH378287 1317771 185 - 2905041 ctccttttcctctttttctctcccatc-----ccttTACTCTCTGA-----------------ATAAATATTTGAGGTGCC------AACCACAG-GCCGAGCACTCTGTGTCCTTTGGGAGTGTGTATTCAGAACTATA--AGAAATCACTCTGTTCCTT----C---TCCTGCACAATCACGAGCCTTGACACTTGCCATAGGAAGAAGGTACA---AACTGGA i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1280904 185 - 2164891 ctccttttcctctttttctCCCCCATC-----CCTTTACTCTCTGA-----------------ATAAGTATTTGAGGTGCC------AACCACAG-GCCGAGCACGCTGTGTCCTTTGGGAGTGTGTATTCAGAACTATA--AGAAATCACTCTTTTCCTT----C---TTCTGCACAATCACGAGCCTTGACGCTTGCCATGGGAAGAACTTAGG---AAATGGA i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1528272 185 - 1813869 ccccttttcctctttTTCTCCCCCATC-----CCTTTACTCTCTGA-----------------ATAAGTATTTGAGGTGCC------AATCACAG-GCCGAGCACGCTGTGTCCTTTGGGAGTGTGTATTCAGAAGTATA--AGAAATCACTGTGTTCCTT----C---TCCTGCACAATCATGGGCCTTGACACTTGCCATGGGAAGAAGGTAGG---AACTGGA i aotNan1.NW_018494782v1 C 0 C 0 s canFam3.chr1 56195473 156 + 122678785 ----------------------------------------CCCCAA-----------------GTAGGTATCTGAGGCACC------TGACACAACGACTTGCCATCAGCATCCTTCGGGAGTATGTATCCACACCTACA--AGAGAGCAGCCCATTCCCT----CTTGTCCTGTGTCCCCATCAGCCTGGCCTCTTCCTGTGATGAGAAGGTGGGTGCATCTGA- i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 595440 220 + 760995 cttcttccttccttcttccctcccttcctcctCCTTCATTTTTTAAAAACTTTTCCCTCAAACATAAGTTTTTGAGGCACCTCTTTATATCTCAATGATTTGTTATTTATGCCTTTTGAAAGTATGTATATATAAATATACTAAAAATCTGTCTGTTTCCTTCTCC---TTCTGCCTACAGATGGGACACTCTTCTTACTGTGCTAAGAAGGCAGT---CATTTGA i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10971741 156 - 12073884 I a score=26785.000000 s hg38.chr6_KB021644v2_alt 130426 3 + 185823 --CAC s panTro5.chr6 173586715 3 + 175400573 --CAC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171820242 3 + 173848474 --CAC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11503021 3 - 12463322 --TAC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156332366 3 + 157873769 --CAC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170358731 3 + 172585720 --CAC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169104149 3 - 170955103 --CAC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8390341 3 + 10161646 --CAC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1422073 3 + 3144229 --CAC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96708449 3 + 98384682 --CAC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8244190 3 - 10857215 --CAC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15633365 3 - 23502949 --CAA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169916182 3 + 171630274 --cac i calJac3.chr4 I 137 C 0 s saiBol1.JH378287 1317956 3 - 2905041 --CAC i saiBol1.JH378287 C 0 I 320 s cebCap1.NW_016107695v1 1281089 3 - 2164891 --CAC i cebCap1.NW_016107695v1 C 0 I 89 s aotNan1.NW_018494782v1 1528457 3 - 1813869 --CAC i aotNan1.NW_018494782v1 C 0 I 225 s canFam3.chr1 56195629 3 + 122678785 --CAC i canFam3.chr1 C 0 I 2 s dasNov3.JH569188 595660 3 + 760995 TCC-- i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10971741 156 - 12073884 I a score=25377.000000 s hg38.chr6_KB021644v2_alt 130429 4 + 185823 --CTCC s panTro5.chr6 173586718 4 + 175400573 --CTCC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171820245 4 + 173848474 --CTCC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11503024 4 - 12463322 --CTCC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156332369 4 + 157873769 --CTCC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170358734 4 + 172585720 --CTCC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169104152 4 - 170955103 --CTCC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8390344 4 + 10161646 --CTCC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1422076 4 + 3144229 --CTCC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96708452 4 + 98384682 --CTCC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8244193 4 - 10857215 --CTCC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15633368 4 - 23502949 --CTCC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169916185 4 + 171630274 --ctct i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1318279 4 - 2905041 --CTCT i saiBol1.JH378287 I 320 C 0 s cebCap1.NW_016107695v1 1281181 4 - 2164891 --ctct i cebCap1.NW_016107695v1 I 89 C 0 s canFam3.chr1 56195634 2 + 122678785 --CT-- i canFam3.chr1 I 2 I 5 s dasNov3.JH569188 595663 4 + 760995 CATT-- i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10971741 156 - 12073884 I e aotNan1.NW_018494782v1 1528460 225 - 1813869 I a score=1545785.000000 s hg38.chr6_KB021644v2_alt 130433 173 + 185823 -ATCACCCTCTCTTTTTACAC-TTTCCAACGTCAGGACAGCACCCTTCCCTCCACTCCCACCTTCAGACTCTCA-GAGGAACAGGCCATCTTCAGCTTGCGTTA--GAACCTCTCCTCTACAGCCAGGACCCAGGTGTTTTCACACATTCC-C---CAGGGTTTTCTCTC-C--AATCAGCTTTG s panTro5.chr6 173586722 173 + 175400573 -ATCACCCTCTCTTTTTAAAC-TTTCCAACGTCAGGACAGCACCCTTCCCTCCACTCCCACCTTCAGACTCTCA-GAGGAACAGGCCATCTTCACCTTGCGTTA--GAACCTCTCCTCTGCAGCCAGGACCCAGGTGTCTTCACACATTCC-C---CAGGGTTTTCTCTC-C--ACGCGGCTTTG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171820249 173 + 173848474 -ATCACCCTCTCTTTTTAAAC-TTTCCAACGTCAGGACAGCACCCTTCCCTCCACTCCCACCTTCAGACTCTCA-GAGGAACAGGCCATCTTCACCTTGCGTTA--GAACCTCTCCTCTGCAGCCAGGACCCAGGTGTCTTCACACATTCC-C---CAGGGTTTTCTCTC-C--ACGCGGCTTTG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11503028 173 - 12463322 -ATCACCCTCTCTTTTTAAAC-TTTTCAACGTCAGGACAGCACCCTTCCCTCCACTCCCACCTTCAGACTCTCA-GAGGAACAGGCAATCTTCACCTTGCGTTA--GAACCTCTCCTCTGCAGCCAGGAGCCAGGTGTCTTCACACATTCC-C---CAGGGTTTTCTCTC-C--ACTCGGCTTTG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156332373 172 + 157873769 -ATCACCCTCTCTTTTTAAAC-TTTCCAACGTCAGGACAGCACCCTTCCCTCCACTCCCACCTTCAGACTCTCA-GAGGAAGAGGCAATCTTCACCTCGCGTTA--GAACCTCTCCTCTGCAGCCAGGACCCAGGTGTCTTCACAC-TTCC-C---CAGGTTTTTCTCTC-C--ACTCGGCTTTG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170358738 172 + 172585720 -ATCATCCTCTCTTTTTAAAC-TTTCCAATGTCAGGACAGCACCCTTCCCTCCACTCTCACCTTCAGACTCTCA-GAGGAAGA-GTTATCTTCACCTCGCGTTA--GAACCTCTTCTCTGCAGCCAGGACCCGGGCATCTTCACATGTCCC-C---CAGAGTTTTCTTTC-C--ACTCGACTTTG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169104156 172 - 170955103 -ATCATCCTCTCTTTTTAAAC-TTTCCAACGTCAGGACAGCACCCTTCCCTCCACTCTCACCTTCAGACTCTCA-GAGGAAGA-GTTATCTTCACCTCGCGTTA--GAACCTCTTCTCTGCAGCCAGGACCCGGGCATCTTCACATGTCCC-C---CAGAGTTTTCTTTC-C--ACTCGACTTTG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8390348 172 + 10161646 -ATCATCCTCTCTTTTTAAAC-TTTCCAACGTCAGGACAGCACCCTTCCCTCCACTCTCACCTTCAGACTCTCA-GAGGAAGA-GTTATCTTCACCTCGCGTTA--GAACCTCTTCTCTGCAGCCAGGACCCGGGCATCTTCACATGTCCC-C---CAGAGTTTTCTTTC-C--ACTCGACTTTG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1422080 172 + 3144229 -ATCACCCTCTCTTTTTAAAC-TTTTCAACGTCAGGACAGCACCCTTCCCTCCACTCTCACCTTCAGACTCTCA-GAGGAAGA-GTTATCTTCACCTCGCGTTA--GAACCTCTTCTCTGCAGCCAGGACCCGGGTGTCTGCACATGTCCC-C---CAGAGTTTTCTTTC-C--ACTCAACTTTG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96708456 172 + 98384682 -ATCACCCTCTCTTTTTAAAC-TTTCCAACGTCAGGACAGCACCCTTCCCTCCACTCTCACCTTCAGACTCTCA-GAGGAAGA-GTCATCTTCACCTTGCGTTA--GAACCTCTTCTCTGCAGCCAGGACCCGGGTGTCTTCACATGTCCC-C---CAGAGTTTTCTTTC-C--ACTCGACTTTG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8244197 172 - 10857215 -ATCACCCTCTCTTTTTAAAC-TTTCCAACGTCAGGACAGCACCCTTCCCTCCACTCTCACCTTCAGACTCTCA-GAGGAAGA-GTTATCTTCACCTCGCGTTA--GAACCTCTTCTCTGCAGCCAGGACCCGGGTGTCTGCACATGTCCC-C---CAGAGTTTTCTTTC-C--ACTCAACTTTG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15633372 172 - 23502949 -ATCACCCTCTGTTTTTAAAC-TTTCCAACGTCAGGACAGTACCCTTCCCTCCACTCTCACCTTCAGACTCTCA-GAGGAAGA-GTCATCTTCACCTCGCGTTA--GAACCTCTTCTCTGCAGCCAGGGCTCAGGTGTCTTCACATGTCCC-C---CAGAGTTTTCTTTC-C--ACTCGACTTTG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169916189 169 + 171630274 -atcacctTTTCTTTTTAAAACTTGTTAATGTCAGGACCGCACCTGTTCCTCGACTTCCACCTTTGGACTCTC--AAGGCAG------TCATCGCCTCCCACTGCAGAATGTCTCCTCTGCAGCCAGGACCCAGGTGTCTTCCCACATCCC-C---AAGGGTCTCCTCTC-C--GCTCGCCTTTG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1318283 172 - 2905041 -ATTACCTTTTCTTTTTAAAG-TTGTTAATGTCAGGACCGCACCCTTTCCTCGACTTCCACGTTCGGACTTTA--GAGGAAGAGGCGACCATCGCCTCTCGCTG--GAATCCCTCCTCCGCAGCCAGGACCCAGGTGTCTTCCCACGTCCC-G---AAGGGTCTCGTCTC-C--GCTCGCCTTTG i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1281185 173 - 2164891 -atTACCTTTTCTTTTTAAAC-TTGTTAATGTCATGACCGCACCCTTCCCTCGACTTCCACCTTCGGACTCTCA-GAGGAAGAGGCAGTCATCACCTCCCACTA--GAATCTCTCCTCTGTAGCCAGGACCCAGGTGTCTTCCCACATCTC-C---AAGGGTCTTGTCTC-C--GCTCGCCTTTG i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1528685 172 - 1813869 -atcaccTTTTCTTTTTAAAC-TTGTTAATGTCAGGACCGCACCCTTCCCTCGACTTCCACCTTCCGACTCTCA-GAGGAAGAGGCACTCATCGCCTCCTGCTG--GAATCTCTCCCCTGCAGCCAGGACCCAGGTGTCTTCCCATGTCCC-----AAGGGTCTCATCTC-C--GCTCACCTTTG i aotNan1.NW_018494782v1 I 225 C 0 s canFam3.chr1 56195641 141 + 122678785 -ATCACC-----TTTCTGATC-CTTCACCTGCCACGACAGCACC--TCCCTCTGTTCTC-CTTCCACACCCCCATGAGGAAAG-----------------------GG------CTTCTGCAGCCAGGATCCA-ACATCTACAAACATTCCGC---CAAGATTTTCTCTT-CTTGCTTCACTTTG i canFam3.chr1 I 5 C 0 s dasNov3.JH569188 595667 168 + 760995 ACTCATTCTCCCTTCTTGCTC-CTTCAAATATTACAATGG-AGTCATCTGTCCATTCCTCCTTCCATAGTCTCA-GAAGAAGT----ATCCTT-TCTCAAATTT--GAAT---TTCTCTGTTACC-GGATCCAAACATTTCCACACATCTC-CTCTAAGAGTCTCTTTTCTC--GATTGCCTTTG i dasNov3.JH569188 C 0 I 1351 e otoGar3.GL873575 10971741 156 - 12073884 I a score=1660223.000000 s hg38.chr6_KB021644v2_alt 130606 175 + 185823 CGCCCCATCC-CTCATGTTCACATTC-CATTTAGAGAGGAAGCTGCACTGGCCCTGAGCCCCGCATTGCCTGGTGTTTCCCATCACTGCT-------------------CCACTGACCTTCCTGTCTCCTGCCGGGACGGTGGCTGTGGCCCC----CGAAGCTGGGCTCCTGCCTTCC-CTTG------------CCCCCCACACCCTCCTC s panTro5.chr6 173586895 175 + 175400573 CGCCCCATCC-CTCATGTTCACATTC-CATTTAGAGAGGAAGCTGCACTGGCCCTGAGCCCCGCATTGCCTGGTGTTTCCCATCACTGCT-------------------CCACTGACCTTCCTGTCTCCTGCCGAGACGGTGGCTGTGGCCCC----CGAAGCTGGGCTCCTGCCTTCC-CTTG------------CCCCCTACACCCTCCTC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171820422 175 + 173848474 CGCCCCATCC-CTCATGTTCACATTC-CATTTAGAGAGGAAGCTGCACTGGCCCTGAGCCCCGCATTGCCTGGTGTTTCCCATCACTGCT-------------------CCACTGACCTTCCTGTCTCCTGCCGAGACGGTGGCTGTGGCCCC----CGAAGCTGGGCTCCTGCCTTCC-CTTG------------CCCCCTACACCCTCCTC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11503201 175 - 12463322 CGCCCCATCC-CTCATGTTCACATTC-CATTTAGAGAGGAAGCTGCACTGGCCCTGAGCCCCGCATTGCCTGGTGTTTCCCATCACTGCT-------------------CCACTGACCTTCCTGTCTCCTGCCGAGACGGTGGCTGTGGCCCC----CGAAGCTGGGCTCCTGCCTTCC-CTTG------------CCCCCTACACCCTCCTC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156332545 175 + 157873769 CACCCCATCC-CTCACCTTCATGTTC-CGTTTAGAGAGGAAGCCACACTGGCCACGAGCCCCGCATTGCCTGGTGTTTCCCATCACTGCT-------------------CCACTGACCTTCCTGTTTCCTGCTGAGATGGTGGCTGTGGCCCC----CGAAGCTAGGCTCCTGCCTTCC-CTTG------------CCCCCCACACCCTCCTC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170358910 180 + 172585720 CGCCTCATCC-CTCATGTTCACGTTC-CATTTAGAGAGGAAGCCACACTGGCCCTGAGCCCCACATTGCTTGGTGTGTCCCATCACTGCT-------------------CCACTGACCTTCCTGTCTCCTGCCGAGACAGTGG-TGTGGCCCC----CGAAGCTGGGCTCCTGCCTTCC-CTTG------CCCCGCCCCCGCACACCCTCCTT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169104328 180 - 170955103 CGCCTCATCC-CTCATGTTCACGTTC-CATTTAGAGAGGAAGCCACACTGGCCCTGAGCCCCACATTGCTTGGTGTGTCCCATCACTGCT-------------------CCACTGATCTTCCTGTCTCCTGCTGAGACAGTGG-TGTGGCCCC----CGAAGCTGGGCTCCTGCCTTCC-CTTG------CCCCGCCCCCACACACCCTCCTT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8390520 179 + 10161646 TGCCTCATCC-CTCATGTTCACGTTC-CACTTAGAGAGGAAGCCACACTGGCCCTGAGCCCCACATTGCTTGGTGTGTCCCATCACTGCT-------------------CCACTGATCTTCCTGTCTCCTGCTGAGACAGTGG-TGTGGCCCC----CGAAGCTGGGCTCCTGCCTTCC-CTTG------CCCCG-CCCCACACACCCTCCTT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1422252 180 + 3144229 CGCCCCATCC-CTCATGTTCACGTTC-CATTTAGAGAGGAAGCCACACTGGCCCTGAGCCCCACATTGCTTGGTGTGTCCCATCACTGCT-------------------CCACTGACCTTCCTGTCTCCTGCTGAGACAGTGG-TGTGGCCCC----CGAAGCTGGGCTCCTGCCTTCC-CTTG------CCCCGCCCCCGCACACCCTCCTT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96708628 180 + 98384682 CGCCCCGTCC-CTCATGTTCACGTTC-CACTTCGAGAGGAAGCCGCACTGGCCCTGAGCCCCGCATTGCTTGGTATGTCCCATCACTGCT-------------------CCACTGACCTTCCTGTCTCCTGCCGAGACAGGGG-TGTGGCCCC----TGAAGCTGGGCTCCTGCCTTCC-ATTG------CCCCACCCCCCCACACCCTCCTC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8244369 180 - 10857215 CGCCCCATCC-CTCATGTTTACGTTC-CATTTAGAGAGGAAGCCACACTGGCCCTGAGCCCCACATTGCTTGGTGTGTCCCATCACTGCT-------------------CCACTGAGCTTCCTGTCTCCTGCTGAGACAGTGG-TGTGGCCCC----CGAAGCTGGGCTCCTGCCTTCC-CTTG------CCCCGCCCCCGCACACCCTCCTT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15633544 180 - 23502949 CGCCCCATCC-CTCATGTTCACGTTC-CGTTTAGAGAGGAAGCCACACTGGCCCTGAGCCCCACATTGCTTGGTGTGTCCCATCACTGCT-------------------CCACTGATCTTCCTGTCTTCTGCTGCGACAGTGG-TGTGGCCCC----CGAAGCTGGGCTCCTGCCTTCC-CTTG------CCCCGCCCCCGCACACCCTCCTC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169916358 174 + 171630274 TGCCCCATTC-TTCATGTTTGTGTTC-TGTTTAGAGAGGAAGCCTCGCTGGCCCTGAGCC-CCGGTGGCCCAGTGTGTCCCATCACTGCT-------------------CCGCTGGCCTTCCTGTCTCCTGCCGAGACCGTGGCTATGGCTCC----CGGAGCTGGGCTCCTGCCTCCA-CTTG------------CCCCCCACACCCTCCTT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1318455 175 - 2905041 CGCCCCATTC-TTCATGTTCGTGTTC-TGTTGAGAGAGGAAGCCGCGCTGGCCCTGAGCTGCCCGTGGCCCGGCGTGTCCCATCGCTGCT-------------------CCGCTGGCCTCCCTGTCTCCTGCCGAGACCGCGGCCGAGGCTCC----CGGAGCTGGGCTCCTGCCTCCA-CTTG------------CCCCCCGCACCCTCCTC i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1281358 175 - 2164891 CACCCCATTC-TTCATGTTCGTGTTC-TGTTTAGAGAGGAAGCCGCACTGGCCCTGAGCCCCCCGTGGCCCGGTGTGTCCCATCACTGCT-------------------CTGCTGGCCTTCCTGTCTCTTGCTGAGACCGTGGCTGCGGCTCC----CGGAGCTGGGCTCCTGCCTCCG-CTTG------------TCCCCCGCACCCTCCTG i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1528857 175 - 1813869 CACCCCATTC-TTCATGTTCGTTTTC-TGTTTAGAGAGGAAGCCGCGCTGGCCCTGAGCCCCCCGTGGCCCGGTGTGTCCCGTCACTGCT-------------------CCGCTGGCCTTCCTGTCTCCTGCCGAGACCGTGGCTGTGGCTCC----CGGAGCTGGGCTCCTGCCTCCA-CCTG------------CCCCCCGCACCCTCCTC i aotNan1.NW_018494782v1 C 0 C 0 s canFam3.chr1 56195782 207 + 122678785 CACTTTTCCTGTTCATTTTCATTTTCACATCCAAAGAGAAAGTCTCATTAATTCTAAATTCC-CGTTCCTTGATGTGTGCCACAACTGCTGTATTAGACTCAGTCCTTGCCCCTGTCCCCTCTGCCCCCCACTTTGACTGC-----TGGTCCCGCTGTGTAACTGGTGTCCTACTTCCAGCTTGGACATATTCATACCATCCACACTCTCCTC i canFam3.chr1 C 0 I 1095 e otoGar3.GL873575 10971741 156 - 12073884 I e dasNov3.JH569188 595835 1351 + 760995 I a score=1209906.000000 s hg38.chr6_KB021644v2_alt 130781 134 + 185823 GAGGCTCCAAGAGTGACAGGCTGTGGGCAGCCTCAGTCCTCTCCCCTCTCCATCTGCTTTCAACCAGGAATTAATTCGAGCAGGAACACCGCAGTGAACCCTTCCTGGCAGAATAGGACTGTGGTGTTGAAGGC s panTro5.chr6 173587070 134 + 175400573 GAGGCTCCAAGAGTGACAGGCTGTGGGCAGCCTCAGTCCTCTCCCCTCTCCATCTGCTTTCAACCAGGAATTAATTCGAGCAGGAACACCGCAGTGAACCCTTCCTGGCAGAATAGGACTGTGGTGTTGAAGAT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171820597 134 + 173848474 AAGGCTCAAAGAGTGACAGGCTGTGGGCAGCCTCAGTCCTCTCCCCTCTCCATCTGCTTTCAACCAGGAATTAATTCGAGCAGGAACACCGCAGTGAACCCTTCCTGGCAGAATAGGACTGTGGTGTTGAAGAT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11503376 134 - 12463322 GAGGCTCCAAGAGTGACAGGCTGTGGGCAGCCTCAGTCCTCTCCCCTCTCCATCTGCTTTCAACCAGGAATTAATTCGAGCGGGAACACCGCAGTGAACCCTTCCTGGCAGAACAGGACTGTGGTGTTGAAGAC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156332720 134 + 157873769 GAGGCTCCAAGAGTGAGAGGCTGTGGGCAGCCTCAGTCCTCTCCCTTCTCCATCTGCTTTCAACCAGGAACTAACTCGGGCAGGAACACCGCAGTGAACCCTTCCTGGCAGGACAGGACTGTGGTGTTGAAGAC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170359090 134 + 172585720 GAGGCTCCAAGAGTGAGAGGCTGTGGGCAGCCTCAGTCCTCTCCCATCTCCATCTGCTTTCAACCAGGAACTAATTCAGGCAGAGACACCGCAGTGAACCCTTCCTGGCAGGACAGAACTCTGGTGTTGAAGAT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169104508 134 - 170955103 GAGGCTCCAAGAGTGAGAGGCTGTGGGCAGCCTCAGTCCTCTCCCATCTCCATCTGCTTTCAACCAGGAACTAATTCAGGCAGGGGCACCGCAGTGAACCCTTCCTGGCAGGACAGAACTCTGGTGTTGAAGAC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8390699 134 + 10161646 GAGGCTCCAAGAGTAAGAGGCTGTGGGCAGCCTCAGTCCTCTCCCATCTCCATCTgctttcaaccaggaactaattcaggcaggggcaccgcagtgaacccttcctGGCAGGACAGAACTCTGGTGTTGAAGAC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1422432 134 + 3144229 GAGGCTCCAAGAGTGAGAGGCTGTGGGCAGCCTCAGTCCTCTCCCATCTCCATCTgctttcaaccaggaactaattcaggcaggggcaccgcagtgaacccttcctGGCAGGACAGAACTCTGGTGTTGAAGAC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96708808 129 + 98384682 GAAGCTCCAAGAGTGAGAGGCTGTGGGCAGCCTCAGTCCCCTCCCATCTCCATCTGCTTTCAACCAGGAACTAATTCAGGCAGGGGCACCGCAGTGAACCCTTCCTGGCAAGACGA-----TGTTGTTGAAGAC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8244549 134 - 10857215 GAGGCTCCAAGAGTGAGAGGCTGTGGGCAGCCTCAGTCCTCTCCCATCTCCATCTgctttcaaccaggaactaattcaggcaggggcaccgcagtgaacccttcctGGCAGGACAGAACTCTGGTATTGAAGAC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15633724 134 - 23502949 AAGGCTCCAAGAGTGAGAGGCTGTGGGCAGCCTCAGTCCTCTCCCATCTCCACCTGCTTTCAACCAGGAACTAATTCAGGCAGGGGCACTGCAGTGAACCCTTCCTGGCAGGACAGAACTCTGGTGTTGAAGAC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169916532 133 + 171630274 GAGGCACCAAGAGTGC-AGGCTGTGGGCAGCCTCAGTCCACTCCCCTTTCTGTCTGCTTTCAGCCAGGAACTAAGCCGAGCAGGGGCCCCGTGGTGAACCCTCCCTGGCAGGACGGGACTCTGGTACTGAGGAT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1318630 118 - 2905041 GAGGCTCCAGGAGTGCGAGGCTGTGGGCGGCCTCAGTCTGCTCCCC------------TTCAGCCAGGAGCTAAGCCGAGCAGGGTCACCACGGTGAACCCTCCCTGGCAGGGCGGGGCTC--GTGCTGAGG-- i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1281533 134 - 2164891 GAGGCCCCAAGAGTGCGAGGCTGTGGGAAGCCTCAGTCTGCTCCCCTCTCTGTCTGCTTTCAGCCAGGAACTAAGCCGAGCAGGGGCACCACGATGAACACTCCCTGGCAGGACAGGACTCTGGTGCTGAGGTT i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1529032 134 - 1813869 AAGCCTCCAAGAGTGCGAGGCTGTGGGCAGCCTCAGTCCGCTCCCCTCTCTGTCTGCTTTCAGCCAGGAACTAAGCCGAGCAGGGGCAGCACGGTGGACCCTCCCTGGCAGGACAAGACTCTGGTGCTGAGGAC i aotNan1.NW_018494782v1 C 0 I 19 e otoGar3.GL873575 10971741 156 - 12073884 I e dasNov3.JH569188 595835 1351 + 760995 I e canFam3.chr1 56195989 1095 + 122678785 I a score=114690.000000 s hg38.chr6_KB021644v2_alt 130915 16 + 185823 AAGGCTCAACCACCCT s panTro5.chr6 173587204 16 + 175400573 GAGGCTCAACCACCCT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171820731 16 + 173848474 GAGGCTCAACCACCCT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11503510 16 - 12463322 GAGGCTCAACCACCCT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156332854 16 + 157873769 AAGGCTCAACCACCCT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170359224 16 + 172585720 GAGACACAACCACCCT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169104642 16 - 170955103 GAGACACAACCACCCT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8390833 16 + 10161646 GAGGCACAACCACCCT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1422566 16 + 3144229 GAGGCACAACCACCCT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96708937 16 + 98384682 GAGGCACAACCACCCT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8244683 16 - 10857215 GAGGCACAACCACCCT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15633858 16 - 23502949 AAGGCACAACCACCCT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169916665 15 + 171630274 -AGGCGCAGCCACCCT i calJac3.chr4 C 0 I 4 s saiBol1.JH378287 1318748 5 - 2905041 -----------ACCCT i saiBol1.JH378287 C 0 I 4 s cebCap1.NW_016107695v1 1281667 15 - 2164891 -GGGTGCAGCCACCCT i cebCap1.NW_016107695v1 C 0 I 4 e otoGar3.GL873575 10971741 156 - 12073884 I e aotNan1.NW_018494782v1 1529166 19 - 1813869 I e dasNov3.JH569188 595835 1351 + 760995 I e canFam3.chr1 56195989 1095 + 122678785 I a score=179060.000000 s hg38.chr6_KB021644v2_alt 130931 18 + 185823 CCACCAGCCTGGCTGAAG s panTro5.chr6 173587220 18 + 175400573 CCACCAGCCTGGCTGAAG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171820747 18 + 173848474 CCACCAGCCTGGCTGAAG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11503526 18 - 12463322 CCACCAGCCTGGCTGACG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156332870 18 + 157873769 CCACCAGCCTGGCTGAAG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170359240 18 + 172585720 CCACCAGCCTGGCTGAAG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169104658 18 - 170955103 CCACCAGCCTGGCTGAAG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8390849 18 + 10161646 CCACCAGCCTGGCTGAAG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1422582 18 + 3144229 CCACCAGCCTGGCTGAAG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96708953 17 + 98384682 CC-CCAGCCTGGCTGAAG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8244699 18 - 10857215 CCACCAGCCTGGCTGAAG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15633874 18 - 23502949 CCCCCAGCCTGGCTGAAG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169916684 18 + 171630274 CCACCAGCCTGGCTGAAG i calJac3.chr4 I 4 C 0 s saiBol1.JH378287 1318757 14 - 2905041 CCAGCAGCCTGGCT---- i saiBol1.JH378287 I 4 C 0 s cebCap1.NW_016107695v1 1281686 18 - 2164891 CCACCAGCCTGGCTGAAG i cebCap1.NW_016107695v1 I 4 C 0 s aotNan1.NW_018494782v1 1529185 18 - 1813869 CCACCAGCCTGGCTGAAG i aotNan1.NW_018494782v1 I 19 C 0 e otoGar3.GL873575 10971741 156 - 12073884 I e dasNov3.JH569188 595835 1351 + 760995 I e canFam3.chr1 56195989 1095 + 122678785 I a score=3164394.000000 s hg38.chr6_KB021644v2_alt 130949 337 + 185823 TTTTTGCAGAACCATGCT-GCCCTC-------CGGGTCCCTTCCCCCAGTCCTTCTCCCTCCCCAGGAGC----------------CTGAAGCTCTCCCCAGCTTCTTGTG----CTCTCCAACAAGTCCCTTG--AAAAAACTGAtcccatatttcaatttgttatgaatctatgtttctttatgtctcagagcatactattaacacttgctttaaaggaatagtgtactaattacaacatggaggtcggtctccactgac--acttttcttctgggattgggtcctatttttctgtttcctcggttgaagattgtaaaggttttgccactgtcctggacactg---aaggtcacgtgttcagattctggg s panTro5.chr6 173587238 337 + 175400573 TTTTTGCAGAACCATGCT-GCCCTC-------CGGGTCCCTTCCCCCGATCCTTCTCCCTCACCAGGAGC----------------CTGAAGCTCTCCCCAGCTTCTTGTG----CTCTCCAGCAAGTCCCTTG--AAAAACCTGAtcccatatttcaatttgttatgaatctatgtttctttatgtctcagagcatactattaacacttgctttaaaggaatagtgtactaattacaacatggaggtcagtctccactgac--acttttcttctgggattgggtcctatttttctgtttcctcggttgaaggttgtaaaggttttgccactgtcctggacactg---aaggtcacgtgttcagactctggg i panTro5.chr6 C 0 C 0 s panPan2.chr6 171820765 337 + 173848474 TTTTTGCAGAACCATGCT-GCCCTC-------CGGGTCCCTTCCCCCGATCCTTCTCCCTCACCAGGAGC----------------CTGAAGCTCTCCCCAGCTTCTTGTG----CTCTCCAACAAGTCCCTTG--AAAAACCTGAtcccatatttcaatttgttatgaatctatgtttctttatgtctcagagcatactattaacacttgctttaaaggaatagtgtactaattacaacatggaggtcagtctccactgac--acttttcttctgggattgggtcctatttttctgtttcctcggttgaaggttataaaggttttgccactgtcctggacactg---aaggtcacgtgttcagactctggg i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11503544 337 - 12463322 TTTTTGCAGAACCATGCT-GCCCTC-------CGGGTCCCTTCCCCCAATCCTTCTCCCTCCCCAGGAGC----------------CTGAAGCTCTCCCCAGCTTCTTGTG----CTCTCCAACAAGTCCCTTG--AAAAAACTGAtcccatatttcaatttgttatgaatctatgtttctttatgtctcagagcatactattaacacttgctttaaaggaatagtgtactaattacaacatggaggtcggtctccactgac--acttttcttctgggattgggtcctatttttctgtttcctcagttgaaggttgtaaaggttttgccactgtcctggacactg---aaggtcacgtattcagactctggg i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156332888 343 + 157873769 TTTCTGCAGAACCATGCT-GCCCTC-------CGGGTCCCTTCCCCCAATCCTTCTCCCTCCCCAGGAGC----------------CTGAAGCTCTCTACAGCTTCTTGTGCTCTCTCTCCAACAAGTCCCTTG--AAAAAACTGAtcccatatttcagtttgttatgaatctatgtttctttatgtcacagagcatactattaacacttgctttaaaggaatagtgtactaattacaacatggaggtcggtctccactgactggtttttcttctgggattgggtcctatttttctgtttctttggttgaaggttgtaaaggttttgccactgtcctggacactg---aaggtcatgtgttcagactctggg i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170359258 344 + 172585720 TTTCTGCAGAACCGTGCT-GCCCTC-------CGGGGCCCTTCCCCCGATCCTTCTCCCTCCCCAGGAGC----------------CTGAAGCTCTCCCCAGCTTCTTGTGCTCTCTCTCCAATAAGTCCCCTGG-AAAAAACTGAtcccatatttcaatttgttatgaatctgcgtttctttatgtcacagagcttactattaacacttgctttaaaggaatagtgtactaattacaacatggaggtcggtctccactgattgacttttcttctgggattgggtcctatttttctgtttcctcggttgaaggttataaaggttttgccaccgtcctggacactg---acggtcgtgtgttcagactctggg i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169104676 344 - 170955103 CTTCTGCAGAACCGTGCT-GCCCTC-------CGGGTCCCTTCCCCCGATCCTTCTCCCTCCCCAGGAGC----------------CTGAAGCTCTCCCCAGCTTCTTGTGCTCTCTCTCCAATAAGTCCCTTGG-AAAAAACTGAtcccatgtttcaatttgttatgaatctgcgtttctttatgtcacagagcttactattaacacttgctttaaaggaatagtgtactaattacaacatggaggtcagtctccactgattgacttttcttctgggattgggtcctttttttctgtttcctcggttgaaggttgtaaaggttttgccaccgtcctggacactg---acggtcgtgtgttcagactctggg i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8390867 344 + 10161646 CTTCTGCAGAACCGTGCT-GCCCTC-------TGGGTCCCTTCCCCCGATCCTTCTCCCTCCCCAGGAGC----------------CTGAAGCTCTCCCCAGCTTCTTGTGCTCTCTCTCCAATAAGTCCCTTGG-AAAAAACTGAtcccatgtttcaatttgttatgaatctgcgtttctttatgtcacagagcttactattaacacttgctttaaaggaatagtgtactaattacaacatggaggtcagtctccactgattgacttttcttctgggattgggtcctttttttctgtttcctcggttgaaggttgtaaaggttttgccaccgtcctggacactg---acggtcgtgtgttcagactctggg i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1422600 342 + 3144229 CTTCTGCAGAACCGTGCT-GCCCTC-------CGGGTCCCTTCCCCTGATCCTTCTCCCTCCCCAGGAGC----------------CTGAAGCTCTCCCCAGCTTCTTGTGCTCTCTCTCCAATAAGTCCCTTGG-AAAAAACTGAtcccatatttcaatttgttatgaatctgtgttactttatgtcacagagcttactattaacgcttgctttaaaggaatagtgtactaattacaacatggaggtcggtctccactgattgac--ttcttctgggattgggtcctatttttctgtttcctcggttgaaggttgtaaaggttttgccaccgtcctgggcactg---acggtcgtgtgctcagactctggg i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96708970 343 + 98384682 CTTCTGCAGAACCGTGCT-GCCCTC-------CGGGTCCCTTCCCCCGATCCTTCTCCCTCCCCAGGAGC----------------CTGAAGCTCTCCCCAGCTTCTTGTGCTCTCTCTCCAATAAGTCCCTTGG-AAAAAACTGAtcccatgtttcaatttgttatgaatctgcgtttctttatgtcacagagcttactattagcacttgctttaaaggaatagtgtactaattacaacatggaggtccgtctccactgattgacttttcttctgggattgggtcctattattctgtttcctcggttgaaggttgtaaaggtttt-ccaccgtcctggacactg---accgtcatgtgttcagactctggg i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8244717 344 - 10857215 CTTCTGCAGAACCGTGCT-GCCCTC-------CGGATCCCTTCCCCTGATCCTTCTCCCTCCCCAGGAGC----------------CTGAAGCTCTCCCCAGCTTCTTGTGCTCTCTCTCCAATAAGTCCCTTGG-AAAAAACTGAtcccatatttcaatttgttatgaatctgtgttactttatgtcacagagcttactattaacgcttgctttaaaggaatagtgtactaattacaacatggaggtcggtctccactgattgacttttcttctgggattgggtcctatttttctgtttcctcggttgaaggttgtaaaggttttgccaccgtcctgggcactg---atggtcgtgtgctcagactctggg i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15633892 345 - 23502949 CTTCTGCAGAACCGTGCT-GCCCTC-------TGGGTCCCATCCCCCGATCCTTCTCCCTCCCCAGGAGC----------------CTGAAGCTCTCCCCAGCTTCTTGTGCTCTCTCTCCAATAAGTCCCTTGGAAAAAAACTGAtcccatatttcaatttgttatgaatctgtgtttctttatgtcacagagcttactattaacacttgctttaaaggaatagtgtactaattacaacatgaaggtcggtctccactgattgacttttcttctgggattgggtcctatttttctgtttccttggttgaaggttgtaaaggttttgccactgtcctggacactg---acggtcatgtgttcagactctggg i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169916702 336 + 171630274 CTTCGGCAGG--TGCGCT-GCCGTC-------CGGGTCCCTTCCCCCCATCCTTCTCCCTCCCCAGGAGC----------------CTGAAGCTCTCCCCAGCTTCTTGTGCTCTCTCTCCAATAAGTCCCTGG---AAAGTCTGACCCCATCATTCATTCTAACA-GAATCTGCATTTCTTCATGTTACGGAGCATGCTATTAACACTTGGTTTAAGGGAACCGTGTACCCATTACAGCATGGAGGTTGGCGTCTACTGACT-GCCTTTCTTCCGGGATTGGGCCCTGTGTTCCTGTTTCCTCAGCAGCAGGTTGTAAAGGTTTGGCCGCTGTCCTGGACGCTG---AGTGTCCTGCGCTCAGACTC--GG i calJac3.chr4 C 0 I 1 s saiBol1.JH378287 1318771 323 - 2905041 --------------------CCGTC-------CGGGTCCCTGCCCCCAGCCCTTCTCCCTCCCCGGGAGC----------------CTGAAGCTCTCCCCAGCTTCTTGTGCTCTCTCTCCAATAAGTCCCCGG--AAAAGTCTGACCCCATAGTTCATTCTGTTACGAATCCGTGTTTCTCTGTGTCACGGAGCGCACTGTTAGCAGGTGGTTGAAGGGACCCGGGTTCTCATTCCAGCGTGGAGGGTGGCGTCTGCTGACT-GCGTTTCTTCTGGGACTGGGCCCTGTTTTCCCGATTCCTCCGCTGCAGGTTGTGAGGGTTTGTCCGCCGGCCCGGCCGCTG---AATGTCCTGCGCTCGGACTCGGGG i saiBol1.JH378287 C 0 I 1 s cebCap1.NW_016107695v1 1281704 340 - 2164891 CTTCGGCAGG--CGCACT-GCTGTC-------CGGGTCCCTTCCCCCAATCCTTCTCCCTCCCCGGGAGC----------------CTGAAGCTCTCCCCAGCTTCTTGTGCTCTCTCTCAAGCAAGTGCCTTG--AAAAGTCTGACCCCATAGTTCATTCTGTTATGAATCTgtgtttctttatgtcacggagcatactattaacacttggtttaagggaacagtgtactcattacagcatggaggttggcgtctactgact-gcttttcttctggaattgggccctgttttcctgtttcctcggctgcaggctgtgaaggtttggccactgtcctggacgctg---aatgtcctgcgctcaggcttgggg i cebCap1.NW_016107695v1 C 0 I 38 s aotNan1.NW_018494782v1 1529203 340 - 1813869 CTTCGGCAGG--AGCGCT-GCCATC-------CGGGTCCCTTGCCCCAATCCTTCTCCCTCCCCAGGAGC----------------CTGAAGCTCGCCCCAGCTTCTTGTGCTCTCTCTCCAATAAGTCCCTTG--GAAAGTCTGACCCCATAGttcattctgttatgaatctgtgtttctttatgtcacggagcatactattaccacttggtttaagggaatggtgtactcattacagcatggaggttggcgtctactgact-gctcttcttctgggattgggccctgttttcctgtttcctcggctgcaggttgtaaaggtttggccactgtcctggacgctg---aatgtcctgcgctcagactcgggg i aotNan1.NW_018494782v1 C 0 I 1 s canFam3.chr1 56197084 335 + 122678785 tcttgggagaaacagactggccctcttcctatccagtcttttcctct--tcttcctcctctcacgggatccagacatgtgttggttctgaaga-ctccccACCTCA---------CCTTCCAATACATCTCTTG--CAACATCCCATCCCCCAtttcaattctttatggatatat-ttccactatgttactgaacatagtattaatacttgctttagagtcttagtct----------------gggtcagttcccactgact-gtctttttcttgagattgggtcatattatcctgtttcct----tgaaggttgtataaatttggattcc-ttcttgacattgtgaatattattttgttcagactctgga i canFam3.chr1 I 1095 C 0 e otoGar3.GL873575 10971741 156 - 12073884 I e dasNov3.JH569188 595835 1351 + 760995 I a score=1248.000000 s hg38.chr6_KB021644v2_alt 131286 2 + 185823 tt s panTro5.chr6 173587575 2 + 175400573 tt i panTro5.chr6 C 0 C 0 s panPan2.chr6 171821102 2 + 173848474 tt i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11503881 2 - 12463322 tt i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156333231 2 + 157873769 tt i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170359602 2 + 172585720 tt i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169105020 2 - 170955103 tt i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8391211 2 + 10161646 tt i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1422942 2 + 3144229 tt i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96709313 2 + 98384682 tt i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8245061 2 - 10857215 tt i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15634237 2 - 23502949 tt i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169917039 1 + 171630274 T- i calJac3.chr4 I 1 I 1 s saiBol1.JH378287 1319095 1 - 2905041 T- i saiBol1.JH378287 I 1 I 1 s aotNan1.NW_018494782v1 1529544 1 - 1813869 t- i aotNan1.NW_018494782v1 I 1 I 35 s canFam3.chr1 56197419 2 + 122678785 tt i canFam3.chr1 C 0 C 0 e otoGar3.GL873575 10971741 156 - 12073884 I e cebCap1.NW_016107695v1 1282044 38 - 2164891 I e dasNov3.JH569188 595835 1351 + 760995 I a score=231355.000000 s hg38.chr6_KB021644v2_alt 131288 35 + 185823 ctgttgtattcctccaaacagtgctcagctgtgtc s panTro5.chr6 173587577 35 + 175400573 ctgttgtattcctccgaacagtgctcagctgtgtc i panTro5.chr6 C 0 C 0 s panPan2.chr6 171821104 35 + 173848474 ctgttgtattcctccgaacagtgctcagctgtgtc i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11503883 35 - 12463322 ctgttgtattcctctgaacagtgctcagctgtgtc i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156333233 35 + 157873769 ctgttgtattcctccaaacagcgctcagctgtgtc i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170359604 35 + 172585720 ctgttatattcctccgaacagtgctcagctgtgtt i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169105022 35 - 170955103 ctgttatattcctccgaacagtgctcagctgtgtc i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8391213 35 + 10161646 ctgttatattcctccgaacagtgctcagctgtgtc i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1422944 35 + 3144229 ctgttatattcctctgaacagtgctcagctgtgtc i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96709315 35 + 98384682 ctgttatattcctccaaacagtgctcagctgtgtc i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8245063 35 - 10857215 ctgttatattcctctgaacagtgctcagctgtgtc i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15634239 35 - 23502949 ctgttatattcctccgaacagtgctCAGCTGTGTC i colAng1.NW_012114488v1 C 0 I 274 s calJac3.chr4 169917041 29 + 171630274 ------ACATACTCTGAACGGCTCTCCGCTGCGCG i calJac3.chr4 I 1 C 0 s saiBol1.JH378287 1319097 29 - 2905041 ------CCATGCTCCGAGCAGCACCCCGCTGCGCG i saiBol1.JH378287 I 1 C 0 s canFam3.chr1 56197421 26 + 122678785 ttgttatattcccccaaagagtgttc--------- i canFam3.chr1 C 0 C 0 e otoGar3.GL873575 10971741 156 - 12073884 I e aotNan1.NW_018494782v1 1529545 35 - 1813869 I e cebCap1.NW_016107695v1 1282044 38 - 2164891 I e dasNov3.JH569188 595835 1351 + 760995 I a score=25969.000000 s hg38.chr6_KB021644v2_alt 131323 7 + 185823 attgctg s panTro5.chr6 173587612 7 + 175400573 attgctg i panTro5.chr6 C 0 C 0 s panPan2.chr6 171821139 7 + 173848474 attgttg i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11503918 7 - 12463322 gttgctg i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156333268 7 + 157873769 attgctg i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170359639 7 + 172585720 gttgctg i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169105057 7 - 170955103 gttgctg i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8391248 7 + 10161646 gttgctg i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1422979 7 + 3144229 gttgctg i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96709350 7 + 98384682 cttgctg i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8245098 7 - 10857215 attgctg i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15634548 7 - 23502949 gttgctg i colAng1.NW_012114488v1 I 274 C 0 s calJac3.chr4 169917070 6 + 171630274 CTTGCC- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1319126 6 - 2905041 CCTGCC- i saiBol1.JH378287 C 0 C 0 s canFam3.chr1 56197447 2 + 122678785 --tg--- i canFam3.chr1 C 0 C 0 e otoGar3.GL873575 10971741 156 - 12073884 I e aotNan1.NW_018494782v1 1529545 35 - 1813869 I e cebCap1.NW_016107695v1 1282044 38 - 2164891 I e dasNov3.JH569188 595835 1351 + 760995 I a score=1935545.000000 s hg38.chr6_KB021644v2_alt 131330 235 + 185823 ttgttggtagagcggacactcacttgactggaagcaaactgcaggctctgtctttggacagcaggtcaaat--------ctcaattcagacctttcatctctagctgggc-tgctggaggtgtgtcttgcatatgcacagttcaggggtcatcaggtattagggtagaatttatatacaagatgcgtggatgcccc------------------------------------------------------------------------------tctctgtctctttctccacagatttctccttaatgtctttgtgtctat s panTro5.chr6 173587619 235 + 175400573 ttgttggtagagtggacactcacttgactggaagaaaactgcaggctctgtctttggacagcaggtcaaat--------ctcaattcagacctttcatctctagctgggc-tgctggaggtgtgtcttgcatatgcacagttcaggggtcatcaggtattagggcagaatttatatacgaaacatgtggatgcccc------------------------------------------------------------------------------tgtctgtctctttctccacagatttcttcttaatgtttttgtgtctat i panTro5.chr6 C 0 C 0 s panPan2.chr6 171821146 235 + 173848474 ttgttggtagagtggacactcacttgactggaagaaaactgcaggctctgtctttggacagcagatcaaat--------ctcaattcagacctttcatctctagctgggc-cgctggaggtgtgtcttgcatatgcacagttcaggggtcatcaggtattagggcagaatttatatacgaaacatgtggatgcccc------------------------------------------------------------------------------tgtctgtctctttctccacagatttcttcttaatgtttttgtgtctat i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11503925 235 - 12463322 ttgttggtagagcagacactcacttgactggaagcaaactgcaggctctgtctttggacagcaggtcaaat--------ctcaattcagacctttcatctctagctgggc-tgctggaggtgtgtcttgcatatgcacagttcaggggtcatcaggtattagggcagaatttatatacaaaacgtgtggatgcccc------------------------------------------------------------------------------tctctgtgtctttctccacagatttctccttaatgtttttgtgtctat i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156333275 233 + 157873769 tcgttggtagagtggacactcacttgactggaagcaaactgcaggctctgtctttggacagcaggtcaaat--------ctcaattcagacctttcatctctagctgggc-tgctggaggtgtgtcttgcatatgcacagttcaggggtcatcaggtattagggcagaatttatatacaaaacatgtggatgcccc--------------------------------------------------------------------------------tctgtctctttttccccagatttctccttaacgtttttgtgtctat i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170359646 227 + 172585720 ttgtaggcagagca-acactcactagactggaagcaaactgcaggctttgtctttggacagcaggtcaaat--------ctcaattcagacctttca-------ctgggc-tcctggaggtctatctggcatgtgcatgtttcaggggtcatcaggtattagggcagaatttatacacaaaatgtgtggatgcccc------------------------------------------------------------------------------tctctgtctctttttccccagatttctcctcaatgtttttgtgtctat i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169105064 227 - 170955103 ttgctggtagagca-acactcactagactggaagcaaactgcaggctttgtctttggacagcaggtcaaat--------ctcaattcagacctttca-------ctgggc-tcctggaggtctatctggcatgtgcatgtttcaggggtcatcaggtattagggcagaatttatacacaaaatgtgtggatgcccc------------------------------------------------------------------------------tctctgtctctttttccccagatttatcctcaatgtttttgtgtctat i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8391255 227 + 10161646 ttgttggtagagca-acactcactagactggaagcaaactgcaggctttgtctttggacagcaggtcaaat--------ctcaattcagacctttca-------ctgggc-tcctggaggtctatctggcatgtgcatgtttcaggggtcatcaggtattagggcagaatttatacacaaaatgtgtggatgcccc------------------------------------------------------------------------------tctctgtctctttttccccagatttatcctcaatgtttttgtgtctat i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1422986 227 + 3144229 ttgttggtggagca-acactcactagactggaagcaaactgtaggctttgtctttggacagcaggtcaaat--------ctcaattcagacctttca-------ctgggc-tcctggaggtctgtctggcatgtgcatgtttcaggggtcatcaggtattagggcagaatttatacacaaaatgtgtggatgcccc------------------------------------------------------------------------------tctctgtctctttttccccagatttctcctcaatgtttttgtgtctat i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96709357 227 + 98384682 ttggtggtagagca-acactcactagactggaagcaaactgcaggctttgtctttggacaggaggtcaaat--------ctcaattcagacctttca-------ctgggc-tcctggagatctgtcttgcatgtgcatgtttcaggggtcatcaggtattagggcagaatttatacacaaaatgtgtggatgcccc------------------------------------------------------------------------------tctctgtctctttttccccagatttctcttcaatggttttgtgtctct i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8245105 227 - 10857215 ttgttggtggagca-acactcactagactggaagcaaactgtaggctttgtctttggacagcaggtcaaat--------ctcaattcagacctttca-------ctgggc-tcctggaggtctgtctggcatgtgcatgtttcaggggtcatcaggtattagggcagaatttacacacaaaatgtgtggatgcccc------------------------------------------------------------------------------tctctgtctctttttccccagatttctcctcaatgtttttgtgtctat i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15634555 227 - 23502949 ttgttggtagagca-acactcactagactggaagcaaactgcaggctttgtctttggacagcagatcgaat--------ctcaattcagacctttca-------ctgggc-tcctggaggtctgtcttgcatgcgcatgtttcaggggtcatcaggtattagggcagaatttatacacaaaatgtgtggatgcccc------------------------------------------------------------------------------tctctgtctctttttccccagatttctcctcagtgtttttgtgtctgt i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169917076 312 + 171630274 TTGCTGGTGGAGAGGACACTCGCTCCActgg-agcaaaccgcaggctctggctttggatggcaggtccagg--------ctcagctcagacctttcgtccctggctgggc-tgctgggcatccgtcttgcatttgcacggttcagggttcaccgggtgttagggcagaattcacacacaaaatgtgtgcaggcccctctgcctctctAATTCACACACAAAATGCGTGCACGCCCCTCTGCCTCTCTAATTCACACACAAAATGCATGCACGCCCCTCTGCCTCTTTTCCCTCAGATTTCTGCTTAATGCTTTTGTGTCTGT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1319132 236 - 2905041 CTGCCGGGGGCCTGGACACCCGCCCggcgggaagcaaaccgcaggccctggctttgggtggcaggcccagaagtcacatctcagcccggacc-ttcgtccccggccgggc-tgctgggcgtccgtcttgcctttgcagggctcgggggtcatc-ggcaccagggcagaagtcacacagaaagtgggtgcgcgcccc---------------------------------------------------------------------------------ctgcttcttgtccctcagatttcccctcagcgcttttgtgtc--t i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1282082 233 - 2164891 ttgctggcagagtggacactcgctcaactggaagcaaaccgtaggctctggctttggatggcaggtccaat--------ctcagctcagacctttcatccctggctgggc-tgctgggcgtccgtcttgcctttgcacggctcaggggtcatc-ggtattagggcagaattcacacacaaaatgggtgcatgcccc-------------------------------------------------------------------------------ctctgcctcttttccctcagatttctcctcaacacttttgtgtctgt i cebCap1.NW_016107695v1 I 38 I 25 s aotNan1.NW_018494782v1 1529580 233 - 1813869 ctgctggtagagtggacactcgcttgactggaagcaaaccgcaggctccggc-tcggatggcaggtccaat--------ctcagctcagacctttcatccctggctgggc-tgctgggcgtccgtcttgcattggcatggttcaggggtcaccgggtattagggcagaattcacacacaaaatgggtgcatgcccc-------------------------------------------------------------------------------ctctgcctctcttccctcagatttctccttaatgcttctgtgtctgt i aotNan1.NW_018494782v1 I 35 C 0 s canFam3.chr1 56197449 185 + 122678785 tggttgttacagc--atactaacttggttggaatcaag-tgcaagctctgtctctggatggcagctcagat----------------------tttgtccttagcttggctTGCCGTA--TCGGTCTTAATTATGCATGCTCCAG--------ACATATTAGCACAGATTTTAC-------------GAATGctct-----------------------------------------------------------------------------------------ccttcctaggatttctactcaatttccccatatctat i canFam3.chr1 C 0 C 0 e otoGar3.GL873575 10971741 156 - 12073884 I e dasNov3.JH569188 595835 1351 + 760995 I a score=75435.000000 s hg38.chr6_KB021644v2_alt 131565 8 + 185823 ggttaccc s panTro5.chr6 173587854 8 + 175400573 ggttaccc i panTro5.chr6 C 0 C 0 s panPan2.chr6 171821381 8 + 173848474 ggttaccc i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11504160 8 - 12463322 ggttaccc i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156333508 8 + 157873769 ggttgccc i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170359873 8 + 172585720 ggttgccc i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169105291 8 - 170955103 ggttgccc i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8391482 8 + 10161646 ggttgccc i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1423213 8 + 3144229 ggttgccc i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96709584 8 + 98384682 ggttgccc i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8245332 8 - 10857215 ggttgccc i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15634782 8 - 23502949 ggttgccc i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169917388 7 + 171630274 -GTTACCC i calJac3.chr4 C 0 I 253 s saiBol1.JH378287 1319368 7 - 2905041 -gtcgccc i saiBol1.JH378287 C 0 I 4 s aotNan1.NW_018494782v1 1529813 7 - 1813869 -gttaccc i aotNan1.NW_018494782v1 C 0 I 1 s canFam3.chr1 56197634 8 + 122678785 ggatgccc i canFam3.chr1 C 0 C 0 e otoGar3.GL873575 10971741 156 - 12073884 I e cebCap1.NW_016107695v1 1282315 25 - 2164891 I e dasNov3.JH569188 595835 1351 + 760995 I a score=6228.000000 s hg38.chr6_KB021644v2_alt 131573 1 + 185823 c s panTro5.chr6 173587862 1 + 175400573 c i panTro5.chr6 C 0 C 0 s panPan2.chr6 171821389 1 + 173848474 c i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11504168 1 - 12463322 c i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156333516 1 + 157873769 c i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170359881 1 + 172585720 c i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169105299 1 - 170955103 c i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8391490 1 + 10161646 c i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1423221 1 + 3144229 c i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96709592 1 + 98384682 c i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8245340 1 - 10857215 c i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15634790 1 - 23502949 c i colAng1.NW_012114488v1 C 0 C 0 s canFam3.chr1 56197642 1 + 122678785 t i canFam3.chr1 C 0 C 0 e otoGar3.GL873575 10971741 156 - 12073884 I e saiBol1.JH378287 1319375 4 - 2905041 I e aotNan1.NW_018494782v1 1529820 1 - 1813869 I e cebCap1.NW_016107695v1 1282315 25 - 2164891 I e calJac3.chr4 169917395 253 + 171630274 I e dasNov3.JH569188 595835 1351 + 760995 I a score=79146.000000 s hg38.chr6_KB021644v2_alt 131574 19 + 185823 caattttaccctgcggtgt s panTro5.chr6 173587863 19 + 175400573 caattttaccctgcgttgt i panTro5.chr6 C 0 C 0 s panPan2.chr6 171821390 19 + 173848474 caattttaccctgcggtgt i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11504169 19 - 12463322 caattttaccctgcagtgt i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156333517 19 + 157873769 caattttaccctttggtgt i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170359882 17 + 172585720 caattttaccctttg--gt i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169105300 17 - 170955103 caattttaccctttg--gt i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8391491 17 + 10161646 caattttaccctttg--gt i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1423222 17 + 3144229 caattttaccctttg--gt i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96709593 17 + 98384682 caattttaccctttg--gt i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8245341 17 - 10857215 caattttaccctttg--gt i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15634791 17 - 23502949 caatttcaccctttg--gt i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169917648 17 + 171630274 cacttttactctctg-cg- i calJac3.chr4 I 253 C 0 s saiBol1.JH378287 1319379 14 - 2905041 ---ttgtcctctctg-cg- i saiBol1.JH378287 I 4 C 0 s aotNan1.NW_018494782v1 1529821 17 - 1813869 cacttttactctctg-cg- i aotNan1.NW_018494782v1 I 1 C 0 s canFam3.chr1 56197643 17 + 122678785 acattttaacttctg--gc i canFam3.chr1 C 0 C 0 e otoGar3.GL873575 10971741 156 - 12073884 I e cebCap1.NW_016107695v1 1282315 25 - 2164891 I e dasNov3.JH569188 595835 1351 + 760995 I a score=3692910.000000 s hg38.chr6_KB021644v2_alt 131593 422 + 185823 tcttcagatgagaaagactgcaggtt----acctactggagtttca-ctgccccacatggcctgctggagcctggccttggggtagaagctgtgaagctggtatattcactctgtgcca---actcctctcctccaagtgctaattccagcccagaaactgcctgctttGGAGCATGA-TGTAAACTTGGCCTCCCTTCATGCTACATACAGACCACGGAAATGGGACAACCACCCCAGg------gtgctctgggaccagcttgcattgatttgcaagagtg-attgttgaacattctgcaatttccaagctggctgttccatcatttgtagcttgaaaccagaagttgattaaacatggtgggaccatttataccatggtacttgacaaactacaaaccaggTGTGtctgtctg----------tctgtctctctctct------------ctctctc s panTro5.chr6 173587882 410 + 175400573 tcttcagatgagaaagactgcaggtt----accgactggagtttca-ctgccccacgtggcctgctggagcctggccttgggctagaagctgtgaagctggtatattcactcagtgcca---actcctctcctccaagtgctaattccggcccagaaactgcctgctttGGAGCATGA-TGTAAACTTGGCCTCCCTTCATGCTACATACAGGCCACGGAAATGGGACAACCACCCCAGg------gtgctctgggaccagcttgcattgatttgcaagagtg-attgttgaacattctgcaatttccaagctggctgttccatcatttgtagcttgaaaccagaagttgattaaacatggtgggaccatttataccatggtacttgacaaactacaaaccag------------g----------tctgtctgtttctct------------ctcTCTC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171821409 410 + 173848474 tcttcagatgagaaagactgcaggtt----accgactggagtttca-ctgccccacgtggcctgctggagcctggccttgggctagaagctgtgaagctggtatattcactcagtgcca---actcctctcctccaagtgctaattccggcccagaaactgcctgctttGGAGCATGA-TGTAAACTTGGCCTCCCTTCATGCTACATACAGGCCACGGAAATGGGACAACCACCCCAGg------gtgctctgggaccagcttgcattgatttgcaagagtg-attgttgaacattctgcaatttccaagctggctgttccatcatttgtagcttgaaaccagaagttgattaaacatggtgggaccatttataccatggtacttgacaaactacaaaccag------------g----------tctGtctgtctctct------------ctctctc i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11504188 429 - 12463322 tcttcagatgagaaagactgcaggtt----acctactggagtttca-ctgccccatgtggcctgctggagcctggccttgggctagaagctgtgaagctggtatattcactcagtgcca---actcctctcctccaagtgctaattccggcccagaaactgcctgctttGGAGCATGA-TGTAAACTTGGCCTCCCTTCATGCTACATACAGGCCACGGAAATGGGACACCCACCCCAGg------gtgctctgggaccagcttgcattgatttgcaagagtg-attgttgaacattctgcaatttccaagctggctgttccatcatttgtagcttgaaaccagaagttgattaaacatggtgggaccatttataccatggtacttgacaaactacaaaccag----gtctGtctg----------tctgtctctctctctgtctctctctc-ctctctc i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156333536 426 + 157873769 tcttcagatgagaaagactgcaagttactaacctactggagtttta-ctgccccacatggcccactggagcctggcctcgggctagaagctgtgaagctggtatattcactcagtgcca---actcctctccttcaagtgctaattctggcccagaatctgcctgctttGGAGCATGA-TGTAAACTTGGCCTCCCTTCATGCTACATACAGGCCCCGGAAATGGGACACCAACCCCAGg------gtgctctgggaccagcttgcattgatttgcaagagtg-attgttaagcattctgcaatttccaagctggctgttccatcatttgtagcttgaaaccagaaattgattaaacatggtgggaccatttataccatggtacttgacaaactacaaaccag------------g----------tctctctctctctctctgtctctctctctctctc i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170359899 410 + 172585720 tcttcagatgagaaagactgcaagtt----acctactggagtttta-ctgcctcacgtggcccactggagcctggccttgggctagaagctgtgaagctggtatattcactcagtgcca---gctcctctcctccaagtgctaattctggcccagaatctgcctgctttGGAGCATGA-TGTAAACTTGTCCTCCTTTCATGCTACATACAGGCCACGGAAATGGGACACCCACCCCAGg------gtgttctgggaccagcttgcattgatttgcaagagtc-attgttaaacattctgcaatttccaagtgggctgttcaatcatttgtagcttgaaaccagaaattcattaaacatggtgggactatttataccatggtacttgacaaactacaaaccag------------g----------tctctctctctctct------------cTCTTTT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169105317 410 - 170955103 tcttcagatgagaaagactgcaagtt----acctactggagtttta-ctgcctcacatggcccactggagcctggccttgggctagaagctgtgaagctggtatattcactcagtgcca---gctcctctcctccaagtgctaattctggcccagaatctgcctgctttGGAGCATGA-TGTAAACTTGTCCTCCTTTCATGCTACATACAGGCCACGGAAATGGGACACCCACCCCAGg------gtgttctgggaccagcttgcattgatttgcaagagtc-attgttaaacattctgcaatttccaagtgggctgttcaatcatttgtagcttgaaaccagaaattcattaaacatggtgggactatttataccatggtacttgacaaactacaaaccag------------g----------tctctctctctctct------------cTCTTTT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8391508 410 + 10161646 tcttcagatgagaaagactgcaagtt----acctactggagtttta-ctgcctcacatggcccactggagcctggccttgggctagaagctgtgaagctggtatattcactcagtgcca---gctcctctcctccaagtgctaattctggcccagaatctgcctgctttGGAGCATGA-TGTAAACTTGTCCTCCTTTCATGCTACATACAGGCCACGGAAATGGGACACCCACCCCAGg------gtgttctgggaccagcttgcattgatttgcaagagtc-attgttaaacattctgcaatttccaagtgggctgttcaatcatttgtagcttgaaaccagaaattcattaaacatggtgggactatttataccttggtacttgacaaactacaaaccag------------g----------tctctctctctctct------------cTCTTTT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1423239 408 + 3144229 tcttcagatgagaaagactgcaagtt----acttactggagtttta-ctgcctcacgtggcccactggagcctggccttgggctagaagctgtgaagctggtatattcgctcagtgcca---gctcctctcctccaagtactaattctggcccagaatctgcctgctttGGAGCGTGA-TGTAAACTTGTCCTCCTTTCATGCTACATACAGGCCACGGAAATGGGACACCCACCCCAGg------gtgttctgggaccagcttgcattgatttgcaagagtc-attgttaaacattctgcaatttccaagtgggctgttcaatcatttgtagcttgaaaccagaaattcattaaacatggtgggactatttataccatcgtacttgacaaactacaaaccag------------g------------tctctctctctct------------ctcTTTT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96709610 408 + 98384682 tcttcagatgagaaagactgcaagtt----acctactggagtttta-ctgcctcacgtggcccactggagcctggccttgggctagaagctgtgaagctggtatattcactcagtgcca---gctcctctcctccaagtgctaattctggcccagaatctgcctgctttGGAGCATGA-TGTAAACTTGTCCTCCTTTCATGCTACATACAGGCCACAGAAAAGGGACACCCACCCTAGg------gtgttctgggaccagcttgcattgatttgcaagagtc-attgttaaacattctgcaatttccaagtgggctgttcaatcatttgtagcttgaaagcagaaattcattaaacatggtgggactatttataccatggtacttgacaaactacaaaccag------------g------------tctctctctctct------------ctcTTTT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8245358 409 - 10857215 tcttcagatgag-aagactgcaagtt----acctactggagtttta-ctgcctcacgtggcccactggagcctggccttgggctagaagctgtgaagctggtatattcgctcagtgcca---gctcctctcctccaagtgctaattctggcccagaatctgcctgctttGGAGCATGA-TGTAAACTTGTCCTCCTTTCATGCTACATACAGGCCACGGAAATGGGACACCCACCCCAGg------gtgttctgggaccagcttgcattgatttgcaagagtc-attgttaaacattctgcaatttccaagtgggctgttcaatcatttgtagcttgaaaccagaaattcattaaacatggtgggactatttataccatcgtacttgacaaactacaaaccag------------g----------tctctctctctctct------------cTCTTTT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15634808 419 - 23502949 tcttcagatgagaaagactgcaagtt----acctactggagtttta-ctgcctcacgtggcccactggagcctggcctt-agctagaagctgtgaagctggtgcatttactcagtgctg---actcctctcctccaagtgttaattctggcccagaatctgcctgctttGGAGCATGA-TGTAAACTTGGCCTCCTTTCATGCTACATACAGGCCACGGAAATGGGACACTCACCCCAAg------gtgttctgggaccagcttgcattgattttcaagagtc-attgttaaacattctgcaatttccaagtgggctgttcaatcatttgtagcttgaaaccagaaattcattaaacatggtgggactatttataccatagtacctgacaaactacaaaccag------------gtctctctctctctctctctctctct------------ctttttt i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169917665 392 + 171630274 tcttcagatgagaaaggctgcaggtt----acctcctgcggtttta-ctgccccacgtggcccacgggagcctggccttgggctaaaggctgcgaagctgg-acattcactcagggcct---gttcctgtcctccacgtgctgattcccacccagaatctgcctgctttGGAGCGCGACTGTAAACTCGGCCTCGCTTCATGC----TACAGGCCACAGAAATGGGACGCTCACCCCAGG------GTGTTCTGGGACCAGCTT-CCTTGATGTGAAAGAGCC-ATTGTTAGACATTCTGCAGTTTCCAACCTGC-----------CTGGTAGCTTGAAACCAGACATTGACTAAACAC-GTGGGACCATGTATATCAC-GTACTCGACAAACTACGAACCAG------------G----------tgtctctttctctct------------ctgtctc i calJac3.chr4 C 0 I 489 s saiBol1.JH378287 1319393 346 - 2905041 tctgcagatgagaaagaccgcaggtc----acctcctggggtgtc----------------------------------------agcGCTGTGAAGCGGG-ACACTCACCCGGCGCCT---GTCCCCGTCCTCCAAGCGCTGACGCCGGCCCGGAAGCCGCCTGCTTTGGAGCGGGA------------------TTCATGC----TGCAGGCCCCTGAAACGGGACGCTCCCCCCGGG------G-GTTCTGGGTCCAGCGT-CCTGGATCTGGGAGAGCC-GCCGTCAGACACTCTGCGGTTTCCGACCTGCCTGTTCAGTCACTGTTAGCTTGAAACCAGACACTGACTAGACAC-GTGGGACCACGTGCACCACGGCACTCGACAAACTCCAGACCAG------------G----------TGtctctttcccttt------------ctctctc i saiBol1.JH378287 C 0 I 53 s cebCap1.NW_016107695v1 1282340 402 - 2164891 tcttcagatgagaaagactgcaggtt----acccactggggtttta-ctgccccacgtggcctgtgggagcctggccttgggctaaaagctgtgaagctgg-acattcactcagtgcct---gttcctgtcctccaagtgctgat-ccggcccagaatccgcctgctttGGAGTGCGATTGTAAACTCGGCCTCGCTTTATGC----TACAGGCCACGGAAATGGGACGCTCACCCCAGg------gtgttctgggaccagctt-ccttgatttgcaagagcc-attgttagacattctgcagtttccaacctgcctgttcaatcactggtagcttgaaaccagacactgactaaacat--tgggaccgtgtataccacggtactcaacaaactacaaaccgg------------g----------tatctctttccctct------------ctgtctc i cebCap1.NW_016107695v1 I 25 I 31 s aotNan1.NW_018494782v1 1529838 404 - 1813869 tcttcagatgagaaagactgcaggtt----acctactggggtttta-ctgccccacgtggcccacgggagcctggccttgggctaaaagctgcgaagctgg-acattcactcagtgcct---gttcctgtcttccaagtgctgattccggcccagaacccgcctgctttGGAGCGCGATCGTAAACTCGGCCTCGCTTCATGC----CGCAGGTCACGGAAATGGGACGCTCACCCCAGg------gtgttctgggaccagctt-ccttgatttgcaagagcc-gttgttagacattctgcagtttccagcctgcctgttcaatccctggtagcttgaaaccagacattgactaagcat-gagggcccatgtataccacggtgctcgacaaactgcaaaccag------------g----------catctctttctccct------------ctgtctc i aotNan1.NW_018494782v1 C 0 I 33 s canFam3.chr1 56197660 361 + 122678785 ttttcaggtgacaaagactgcagact----atctattggacttttagctatctcacat-gctttctggggcctggcctcagactagaagctgtgaagatagaaaatcaattctctacaaagtaccttttttttccgagtgatgattcctctcaaaaacctgcccactcttgGCCATGT-GATAAACT----------------------------ATAAGGATGGGAAACCCATCCTATGCCTgtagagtgctggagccatcttccattggctcacaagaaccaattgccaaatattctgaaattttccaattgattgtaaagtcatttacagtttgaaatcaga-----------catggtggga--attaacaccatgataactgacaaaTT----ATCAA------------G----------CACCTCTC-------------------------- i canFam3.chr1 C 0 C 0 e otoGar3.GL873575 10971741 156 - 12073884 I e dasNov3.JH569188 595835 1351 + 760995 I a score=1184568.000000 s hg38.chr6_KB021644v2_alt 132015 127 + 185823 tctT---------------TTGTGGGGAGGGCAACTAATGAGTACCCTACTACCCAA-GA-CATTTACCACTTTATTT---CCTCAAATGTTAACTCTCACTCAGGACTTGCCAGCTTATGGTTTTTCTCTGTTCCTCCAGATAACT s panTro5.chr6 173588292 127 + 175400573 TCTT---------------TTGTGGGGAGGGCAACTAATGAGTACACTACTACCCAA-GA-CATTTACCACTTTATTT---CCTCAAATGTTGACTCTCACTCAGGACTTGCCAGCTTATGGTTTTTCTCTGTTCCTCCAGATAACT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171821819 127 + 173848474 tctT---------------TTGTGGGGAGGGCAACTAATGAGTACACTACTACCCAA-GA-CATTTACCACTTTATTT---CCTCAAATGTTGACTCTCACTCAGGACTTGCCAGCTTATGGTTTTTCTCTGTTCCGCCAGATAACT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11504617 126 - 12463322 tctT---------------TTGTGGGGAGGGCAACTAATGAGTACACTACTACCCAA-GA-CATTTACCACTTTATTT---CCTCAAATGTTGAC-CTCACTCAGGACTTGCCAGCTTATGGTTTTTCTCTGTTCCTCCAGATAACT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156333962 126 + 157873769 CCTT---------------TTGTGGGAAGGGCAACTAATGAGTACACTACTACCCAA-GA-CATTTACCACTTTATTT---CATCAAATGTTGACTCTTATTCA-GACTTGCCAGCTTTTGGTTGTTCTCTGTTCCTCCAAATAACT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170360309 127 + 172585720 CTTT---------------TTGTGGGGAGGGCAATTAATGAGTACACTACTATCCAA-GA-CATATACCACTTTATTT---CCTCAAATGTTGACTCCCATTCAGGACTTGCCAGCTTCTGGTTGTTCTCTATTCCTCCAGATAACT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169105727 127 - 170955103 CTTT---------------TTGTGGGGAGGGCAATTAATGAGTACACTACTATCCAA-GA-CATATACCACTTTATTT---CCTCAAATGTTGACTCCCATTCAGGACTTGCCAGCTTCTGGTTGTTCTCTATTCCTCCAGATAACT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8391918 127 + 10161646 CTTT---------------TTGTGGGGAGGGCAATTAATGAGTACACTACTATCCAA-GA-CATATACCACTTTATTT---CCTCAAATGTTGACTCCCATTCAGGACTTGCCAGCTTCTGGTTGTTCTCTATTCCTCCAGATAACT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1423647 127 + 3144229 CTTT---------------TTGTGGGGAGGGCAATTAATGAGTACACTACTATCCAA-GA-CATATACCACTTTATTT---CCTCAAATGTTGACTCCCATTCAGGACTTGCCAGCTTCTGGTTGTTCTCTATTCCTCCAGATAACT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96710018 127 + 98384682 CTTT---------------TTGTGGGGAGGGCAATTAATGAGTACACTACTATCCAA-GA-CATATACCACTTTATTT---CCTCAAATGTTGACTCCCATTCAGGACTTGCCAGCTTCTGGTTGTTCTCTATTCCTCCAGATAACT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8245767 127 - 10857215 CTTT---------------TTGTGGGGAGGGCAATTAATGAGTACACTACTATCCAA-GA-CATATACCACTTTATTT---CCTCAAATGTTGACTCCCATTCAGGACTTGCCAGCTTCTGGTTGTTCTCTATTCCTCCAGATAACT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15635227 127 - 23502949 cttt---------------ttGTGGGGAGGGCAATTAATGAGTACACTGCTATCCAA-GA-CATTTACCACTTTATTT---CCTCAAATGTTGACTCCTATTCAGGACTTGCCAGCTTCTGGTTTTTATCTATTCCTCCAGATAACT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169918546 127 + 171630274 TCTT---------------TTGGGGGGAGGGCAATTAATGAGTGCAGTACTGCTCAACGG-CCTTTACCACTTTATTT---CCACAAAGGTTGAC-CCCATCCAGGACACGCCAGCTTTCGGTCATTCTATGTTCCTCCAGATAACt i calJac3.chr4 I 489 C 0 s saiBol1.JH378287 1319792 127 - 2905041 TCTT---------------TTGGGGGGAGGGCGATGAATGAGCGCACTACTGCCCAA-GG-CGTTTACCACTTTATCT---CCGCAAACGCTGACGCCCATGCAGGATGTGCCAGCTTCTGGTCATTCTCTGTTCCTCCAGATAACT i saiBol1.JH378287 I 53 C 0 s cebCap1.NW_016107695v1 1282773 127 - 2164891 tctc---------------tTGGGGGGAGGGCAATTAATGAGTGCATTACTGCCCAA-GG-CATTTACCGCTTTATTT---CTGCAAACGTTGACTCCCGTTCAGGACGTGCCAGCTTTTGGTCATTCTCTGTTCCTCCAGATAACt i cebCap1.NW_016107695v1 I 31 C 0 s aotNan1.NW_018494782v1 1530275 127 - 1813869 tctT---------------TTGGGGGGAGGGCAATTAGTGAGTGCGCTGCTGCCTGA-GG-CTTTTACCACTTCATTT---CCGCAAACGTTGACTCCCGTTCAGGACTTGCCAGCTTTTGGTCGTTCTCTGTTCCTCCAGATAACT i aotNan1.NW_018494782v1 I 33 I 273 s canFam3.chr1 56198021 126 + 122678785 TCTTTAGCGGAGGGGAGGGTGGTGGAGAGACCAATTTACAGCTACATTGATGTTCAA-CACCACTTGTCATTTTTTTTTTCCTTCAAAGATTGACTTACCTCTAGAATATCCCTGGTTTTGATCGCT-------------------- i canFam3.chr1 C 0 C 0 e otoGar3.GL873575 10971741 156 - 12073884 I e dasNov3.JH569188 595835 1351 + 760995 I a score=22920.000000 s hg38.chr6_KB021644v2_alt 132142 2 + 185823 GT s panTro5.chr6 173588419 2 + 175400573 GT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171821946 2 + 173848474 GT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11504743 2 - 12463322 GT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156334088 2 + 157873769 GT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170360436 2 + 172585720 GT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169105854 2 - 170955103 GT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8392045 2 + 10161646 GT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1423774 2 + 3144229 GT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96710145 2 + 98384682 GT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8245894 2 - 10857215 GT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15635354 2 - 23502949 GT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169918673 2 + 171630274 gt i calJac3.chr4 C 0 I 180 s saiBol1.JH378287 1319919 2 - 2905041 GT i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1282900 2 - 2164891 gt i cebCap1.NW_016107695v1 C 0 C 0 s canFam3.chr1 56198147 2 + 122678785 GT i canFam3.chr1 C 0 C 0 e otoGar3.GL873575 10971741 156 - 12073884 I e aotNan1.NW_018494782v1 1530402 273 - 1813869 I e dasNov3.JH569188 595835 1351 + 760995 I a score=7098.000000 s hg38.chr6_KB021644v2_alt 132144 1 + 185823 T s panTro5.chr6 173588421 1 + 175400573 T i panTro5.chr6 C 0 C 0 s panPan2.chr6 171821948 1 + 173848474 T i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11504745 1 - 12463322 T i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156334090 1 + 157873769 T i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170360438 1 + 172585720 T i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169105856 1 - 170955103 T i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8392047 1 + 10161646 T i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1423776 1 + 3144229 T i cerAty1.NW_012002071v1 C 0 C 0 s manLeu1.NW_012106474v1 8245896 1 - 10857215 T i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15635356 1 - 23502949 T i colAng1.NW_012114488v1 C 0 C 0 s saiBol1.JH378287 1319921 1 - 2905041 T i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1282902 1 - 2164891 t i cebCap1.NW_016107695v1 C 0 I 406 e otoGar3.GL873575 10971741 156 - 12073884 I e aotNan1.NW_018494782v1 1530402 273 - 1813869 I e calJac3.chr4 169918675 180 + 171630274 I e dasNov3.JH569188 595835 1351 + 760995 I e canFam3.chr1 56198149 0 + 122678785 C e chlSab2.chr13 96710147 0 + 98384682 C a score=18909.000000 s hg38.chr6_KB021644v2_alt 132145 8 + 185823 ATATGtct s panTro5.chr6 173588422 5 + 175400573 ATATG--- i panTro5.chr6 C 0 C 0 s panPan2.chr6 171821949 5 + 173848474 ATATG--- i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11504746 5 - 12463322 ATATt--- i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156334091 8 + 157873769 ATATGtct i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170360439 5 + 172585720 ATATG--- i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169105857 5 - 170955103 ATATG--- i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8392048 5 + 10161646 ATATG--- i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1423777 5 + 3144229 ATAtg--- i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96710147 4 + 98384682 -TATG--- i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8245897 5 - 10857215 ATATG--- i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15635357 5 - 23502949 ATATG--- i colAng1.NW_012114488v1 C 0 C 0 s saiBol1.JH378287 1319922 4 - 2905041 -tgtg--- i saiBol1.JH378287 C 0 I 443 e otoGar3.GL873575 10971741 156 - 12073884 I e aotNan1.NW_018494782v1 1530402 273 - 1813869 I e cebCap1.NW_016107695v1 1282903 406 - 2164891 I e calJac3.chr4 169918675 180 + 171630274 I e dasNov3.JH569188 595835 1351 + 760995 I e canFam3.chr1 56198149 0 + 122678785 C a score=8590.000000 s hg38.chr6_KB021644v2_alt 132153 41 + 185823 ctctctctctctctctc-tctctctctct-ctctctctctctc- s panTro5.chr6 173588427 32 + 175400573 ---------tctctctc-tctctctctct-ctctctgtgtgtg- i panTro5.chr6 C 0 C 0 s panPan2.chr6 171821954 32 + 173848474 ---------tctctctc-tctctctctct-ctctctctctctc- i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11504751 39 - 12463322 ----ctctctctctctcttctctctctctcctctctctctctc- i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156334099 41 + 157873769 ctctctctctctctctc-tctctctctct-ctctctctctctc- i nomLeu3.chr3 C 0 M 252 s rheMac8.chr4 170360444 28 + 172585720 -------------tctc-tctctctctct-ctctctctgtgtg- i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169105862 28 - 170955103 -------------tctc-tctctctctct-ctctctctctctg- i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8392053 30 + 10161646 -----------tctctc-tctctctctct-ctctctctctctc- i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1423782 4 + 3144229 -------------tctc--------------------------- i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96710151 20 + 98384682 -------------TCTC---------TCt-gtgtgtgtgtgtg- i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8245902 20 - 10857215 -------------TCTC---------TCT-CTCTCtgtgtgtg- i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15635362 14 - 23502949 -------------TCtg----------------tgtgtgtatg- i colAng1.NW_012114488v1 C 0 C 0 s canFam3.chr1 56198149 21 + 122678785 ----------------------CCACTTC-CCCTACTTAGTTGC i canFam3.chr1 C 0 C 0 e otoGar3.GL873575 10971741 156 - 12073884 I e saiBol1.JH378287 1319926 443 - 2905041 I e aotNan1.NW_018494782v1 1530402 273 - 1813869 I e cebCap1.NW_016107695v1 1282903 406 - 2164891 I e calJac3.chr4 169918675 180 + 171630274 I e dasNov3.JH569188 595835 1351 + 760995 I a score=25650.000000 s hg38.chr6_KB021644v2_alt 132194 8 + 185823 tctctctc s panTro5.chr6 173588459 8 + 175400573 tgtgtgtg i panTro5.chr6 C 0 C 0 s panPan2.chr6 171821986 8 + 173848474 tgtgtgtg i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11504790 8 - 12463322 tgtgtgtg i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170360472 8 + 172585720 tgtgtgtg i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169105890 8 - 170955103 tgtgtgtg i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8392083 8 + 10161646 tctgtgtg i macNem1.NW_012011000v1 C 0 C 0 s chlSab2.chr13 96710171 8 + 98384682 tgtgtgtg i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8245922 8 - 10857215 tgtgtgtg i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15635376 8 - 23502949 tgcatgtg i colAng1.NW_012114488v1 C 0 C 0 s canFam3.chr1 56198170 8 + 122678785 TCTGTGTT i canFam3.chr1 C 0 C 0 e otoGar3.GL873575 10971741 156 - 12073884 I e saiBol1.JH378287 1319926 443 - 2905041 I e aotNan1.NW_018494782v1 1530402 273 - 1813869 I e cebCap1.NW_016107695v1 1282903 406 - 2164891 I e calJac3.chr4 169918675 180 + 171630274 I e dasNov3.JH569188 595835 1351 + 760995 I e cerAty1.NW_012002071v1 1423786 0 + 3144229 C e nomLeu3.chr3 156334140 252 + 157873769 M a score=166562.000000 s hg38.chr6_KB021644v2_alt 132202 23 + 185823 tgtgtgtgtgtgtgtatgtgtgt s panTro5.chr6 173588467 23 + 175400573 tgtgtgtgtgtgtgtgtgtgtgt i panTro5.chr6 C 0 C 0 s panPan2.chr6 171821994 23 + 173848474 tgtgtgtgtgtgtgtgtgtgtgt i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11504798 21 - 12463322 -gtgtgtgtgtgtg-gtgtgtgt i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170360480 23 + 172585720 tgtgtgtgtgtgtgtgtgtgtgt i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169105898 23 - 170955103 tgtgtgtgtgtgtgtgtgtgtgt i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8392091 23 + 10161646 tgtgtgtgtgtgtgtgtgtgtgt i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1423786 23 + 3144229 tgtgtgtgtgtgtgtgtgtgtgt i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96710179 23 + 98384682 tgtgtgtgtgtgtgtgtgtgtgt i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8245930 23 - 10857215 tgtgtgtgtgtgtgtgtgtgtgt i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15635384 23 - 23502949 tgtgtgtgtgtgtgtgtgtATGT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169918855 23 + 171630274 tgtgtgtgtgtgtgCATGCATGT i calJac3.chr4 I 180 I 19 s saiBol1.JH378287 1320369 23 - 2905041 tgtgtgtgtctgtgtgtgtgtgt i saiBol1.JH378287 I 443 I 6 s canFam3.chr1 56198178 20 + 122678785 TGTGTGTGTGTGT---TGTGTGG i canFam3.chr1 C 0 C 0 e otoGar3.GL873575 10971741 156 - 12073884 I e aotNan1.NW_018494782v1 1530402 273 - 1813869 I e cebCap1.NW_016107695v1 1282903 406 - 2164891 I e dasNov3.JH569188 595835 1351 + 760995 I e nomLeu3.chr3 156334140 252 + 157873769 M a score=212396.000000 s hg38.chr6_KB021644v2_alt 132225 33 + 185823 TAGGAGTACGGTAGTAGTTCTACAAAAGAACAA s panTro5.chr6 173588490 33 + 175400573 TAGGAGTACGGTAGTAGTTCTACAAAAGAGCAA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171822017 33 + 173848474 TAGGAGTACGGTAGTAGTTCTACAAAAGAGCAA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11504819 33 - 12463322 TAGGAGTACGGTAGTAGTTCTACAAAAGAACAA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156334395 33 + 157873769 TAGGAGTATGGTAGTAGTTCTACAAAAGAACAA i nomLeu3.chr3 M 252 C 0 s rheMac8.chr4 170360503 33 + 172585720 TAGGAGTATGGTAGTAGTTCTACAAAAGAACAA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169105921 33 - 170955103 TAGGAGTATGGTAGTAGTTCTACAAAAGAACAA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8392114 33 + 10161646 TAGGAGTATGGTAGTAGTTCTACAAAAGAACAA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1423809 33 + 3144229 TAGGAGTATGGTAGTAGTTCTACAAAAGAACAA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96710202 33 + 98384682 TAGGAGTATGGTAGTAGTTCTACAAAAGAACAA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8245953 33 - 10857215 gAGGAGTATGGTAGTAGTTCTACAAAAGAACAA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15635407 33 - 23502949 TAGGAGTAAGGTAGTAGTTCTATAAAAGAACAA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169918897 19 + 171630274 TAGGAGTATGTCAGTAGTT-------------- i calJac3.chr4 I 19 C 0 s saiBol1.JH378287 1320398 19 - 2905041 TAGGAGTATGTCAGTAGTT-------------- i saiBol1.JH378287 I 6 C 0 s canFam3.chr1 56198198 18 + 122678785 --------TAGCAGCAGTTCTACAAA------- i canFam3.chr1 C 0 C 0 e otoGar3.GL873575 10971741 156 - 12073884 I e aotNan1.NW_018494782v1 1530402 273 - 1813869 I e cebCap1.NW_016107695v1 1282903 406 - 2164891 I e dasNov3.JH569188 595835 1351 + 760995 I a score=1788098.000000 s hg38.chr6_KB021644v2_alt 132258 200 + 185823 CTACAAAAGAAAACTCATAGCTGTTATCTCAAACAAGGTGAATAGGCTCTGATGGGAGCCTTTCAGCCATCATTATAAACAAAAACCCTTTCAATGTATCTTCAATAAAAAGAT--CCTCTCTCTTCTTTCTTAGA-CATCATGTGATCTCTGTTCGTATGACAGGCTCTTCTGA--TCCA--ATCATCTCTACTCATTCCTTAGGT s panTro5.chr6 173588523 200 + 175400573 CCTCAAAAGAAAACTCATAGCTGTTACCTCAAACAAGGTGAATAGGCTCTGATGGGAGCCTTTCAGCCATTATTATAAACAAAAACCCTTTCAATGTATCTTCAATAAAAAGAT--CCTCTCTCTTCTTTCTTAGA-CATCATGTGATCTCTGTTCCTATGACAGGCTCTTCTGA--TCCA--ATCATCTCTACTCATTCCTTAGGT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171822050 200 + 173848474 CCTCAAAAGAAAACTCAGAGCTGTTACCTCAAACAAGGTGAATAGGCTCTGATGGGAGCCTTTCAGCCATTATTATAAACAAAAACCCTTTCAATGTATCTTCAATAAAAAGAT--CCTCTCTCTTCTTTCTTAGA-CATCATGTGATCTCTGTTCCTATGACAGGCTCTTCTGA--TCCA--ATCATCTCTACTCATTCCTTAGGT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11504852 200 - 12463322 CTACAAAAGAAAACTCACAGCTGTTATCTCAAACAAGGTGAATAGGCTCTGATGGGAGCCTTTCAGCCATTATTATAAACAAAAACCCTTTCGATGTATCTTCAATAAAAAGAT--CCTCTCTCTTCTTTCTTAGA-CATCATGTGATCTCTGTTCCTATGACAGGCTCTTCTGA--TCCA--ATCATCTCTACTCATTCCTTAGGT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156334428 193 + 157873769 CTACAAAAGATAACTCACAGCTGTTATCTCAAACAAGGTGAATAGGCTCTGATGGGAGCCTTT----CATTATTAT-AACAAAAACCTTTTCAATGTATCT--AATAGAAAGAT--CCTCTCTCTTGTTCTTAGGA-CATCATGTGATCTCTGTTCCTATGACAGGCTCTTCTGA--TCTA--ATCATTTCTACTCATTCCTTAGGT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170360536 200 + 172585720 CTACAAAGGAAAACTCATAGCTGTTATCTCAAACGAGGTGAATAGGCTCTGATGGGAGCCTTTCAGCCATTAGTATAAACAAAAACGGTTTCAATGTATCCTCAATAAAAAAAT--CCTCTCTCTTCTTTCTTAGA-CAACGTGTGATCTCTGTTCCTATGACAGACTCTTCTGA--TCCA--GTCATCTCTACTCATTCCTTAGGT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169105954 200 - 170955103 CTACAAAGGAAAACTCATAGCTGTTATCTCAAACGAGGTGAATAGGCTCTGATGGGAGCCTTTCAGCCATTAGTATAAACAAAAACGGTTTCAATGTATCCTCAATAAAAAAAT--CCTCTCTCTTCTTTCTTAGA-CAACGTGTGATCTCTGTTCCTATGACAGACTCTTCTGA--TCCA--GTCATCTCTACTCATTCCTTAGGT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8392147 200 + 10161646 CTACAAAGGAAAACTCATAGCTGTTATCTCAAACGAGGTGAATAGGCTCTGATGGGAGCCTTTCAGCCATTAGTATAAACAAAAACGGTTTCAATGTATCCTCAATAAAAAAAT--CCTCTCTCTTCTTTCTTAGA-CAACGTGTGATCTCTGTTCCTATGACAGACTCTTCTGA--TCCA--GTCATCTCTACTCATTCCTTAGGT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1423842 200 + 3144229 CTACAAAGGAAAACTCATAGCTGTTATCTCAAACGAGGTGAATAGGCTCTGATGGGAGCCTTTCAGCCATTAGTATAAACAAAAACGGTTTCAATCTATCCCCAATAAAAAAAT--CCTCTCTCTTCTTTCTTAGA-CAACGTGTGATCTCTGTTCCTATGACAGACTCTTCTGA--TCCA--GTCATCTCTACTCATTCTTTTGGT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96710235 198 + 98384682 CTACAAAGGAAAACTCATAGCTGTTATCTCAAACGAGGTGAATAGGCTCTGATGGGAGCCTTTCAGCCATTAGTATAAACAAAAACGGTTCCAATGTATCCTCAATAAAAAAAT--C--CTCTCTTCTTTCTTAGA-CAACGTGTGATCTCTGTTCCTATGACAGACTCTTCTGA--TCCA--GTCATCTCTACTCATTCCTTAGGT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8245986 200 - 10857215 CTACAAAGGAAAACTCATAGCTGTTATCTCAAACGAGGTGAATAGGCTCTGATGGGAGCCTTTCAGCCATTAGTATAAACAAAAACGGTTTCAATGTATCCCCAATAAAAAAAT--CCTCTCTCTTCTTTCTTAGA-CAACGTGTGATCTCTGTTCCTATGACAGACTCTTCTGA--TCCA--GTCATCTCTACTCATTCTTTAGGT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15635440 200 - 23502949 CTACAAAGGAAAACTCATAGCTGTTATCTCAAACAAGGTGAATAGGCTCTGATGGGAGCCTTTCAGCCGTTATTATAAACAAAAACGGTTTCAATGTATCTTCAATAAAGAAAT--CCTCTCTCTTCTTTCTTAGA-CAATGTGTGATCTCTGTTCCTGTGACAGGCTCTTCTGA--TCCA--GTCATCTCTACTCATTCCTTAGGT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169918916 198 + 171630274 CCACAGAAGAAAATTCATAGCTGTTATCTCAGAGAAGGTGAATAGGCTCTAGTGGGGCCCTTTCAGCCATCATTATAAACAAAAGCCCTTCCACTGTGTCTTCAGGAGAAAGGC--C-TCTCTCTTCTTTCTGGGA-CAGCTTCTCGTCTCTCTGCCTGTGCAAAGCTCTTCTGA--TCCA--GTC-TCTGCACTCATTCCTTAGGT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1320417 194 - 2905041 CTACAAAAGAAAATTCGTAGCTGTTATCTCAGAGAAGGTGAATCGGCTCTAGTGGGACCCTTTCAGCCACTGTTATAAAC---AGGCCTTCCACTGTGTCTTCAGGAGAAAGGG--C--CTCTCTTCTTTCTGGGA-CAGCTCGTCGTCTCTGTGCCTGTGCAGAGCTCTTCTGA--TCCA--ATC-TCTCCACTCATTCCTTAGGT i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1283309 197 - 2164891 CTACAAAAGAAAATTCATAGCTGTTATGTCAGAGAAGGTGAATAGGCTCTAGTGGGGCCCTTTCGGCCATTACTATAAACAGAAGCCCTTCCACTGTGTCTTCAGGAGAAAGGT--C--CTCTCTTCTTTCTGGGA-CAGCTTGTCGTCTCTGTGCCTGTGCAGAGCTCTTCTGA--TCCA--ATC-TCTCCACTCATTCCTTAGGT i cebCap1.NW_016107695v1 I 406 C 0 s aotNan1.NW_018494782v1 1530675 199 - 1813869 CTACAAAAGAAAATTCGTAGCTGTTATCTCAGAGAAGGTGAATAGGCTCTAGTGGGGCCCTTTCAGCCGTTATTATAAACAAAAGCCGTTCCACTGTGTCTTCAGGAGGAAGGT--CCTCTCTCTTCTTTCTGGGG-CAGCTTCTCGTCTCTGTGCCTGTGCAAAGCGCTTCTGA--TCCA--ATC-TCTCCACTCATTCCTTAGGT i aotNan1.NW_018494782v1 I 273 C 0 s canFam3.chr1 56198216 189 + 122678785 --------GAGAGCTTATTGCTGTTACATGAGAGAAGAT-----GGGTCTGTAGGAACATGTTCAACCATTGGCGTGAGTAAAAGCCCTTTGA-----TTTTGAATGAAGAGCTTCCCTGTTTCTTCTTTCTGGGCTCAATTTGAGATCCCCATTTCTATAAATATCTGTTCTAATTTCCATCAACAGCTCTACCCACTTCTGAGAT i canFam3.chr1 C 0 I 187 e otoGar3.GL873575 10971741 156 - 12073884 I e dasNov3.JH569188 595835 1351 + 760995 I a score=3505820.000000 s hg38.chr6_KB021644v2_alt 132458 376 + 185823 TAATTTTTGGCTTGATCAGTATTAATGTTCATATTAAGGCTTTTCATAATCAATTTGTGAC----TTAACACAATTAATATATTTAAACATCTATTAAAACTGAAATACATTTGTGCCCATCTATAGAG----AGGGAAGTTTCTCACATGTTCTCTACAAACACTGGCTACTTGGTTACAAGAAACACTTTCACATTTTCTAGTCCCACAGGCTATTCAC---CA-ACTCTTATGTTTTGT-CATGAAGACTAAGCTTAGCTCATAGTGGCAAATGTACCACTTACTCAGTCATTCCTTCA-AAATGATTTATTAACTGCTTGGATAATAACCATGTAAACAAGTATATTC---ATAATTACAAGAACTTGTACGTCATGAAGTAAAGAAAC s panTro5.chr6 173588723 376 + 175400573 TAATTTTTGGCCTGATCAGTATTAATGTTCATATTAAGGCTTTTCATAATCAATTTGTGAC----TTAACACAATTAATATATTTAAACATCTATTAAAACTGAAATACATTTGTGCCCATCTATAGAG----AGGGAAGTTTCTCACATGTTCTCTACAAACACTGGCTCCTTGGTTACAAGAAACACTTTCACATTTTCTAGTCCCACAGGCTATTCAC---CA-ACTCTTATGTTTTGT-CATGAAGACTAAGCTTAGCTCATAGTGGCAAATATACCACTTACTCAGTCATTCCTTCA-AAACGATTTATTAACTGCTTAGATAATAACCATGTAAACAAGTATATTC---ATAATTACAAGAACTCGTACGTCATGAAGTAAAGAAAC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171822250 376 + 173848474 TAATTTTTGGCCTGATCAGTATTAATGTTCATATTAAGGCTTTTCATAATCAATTTGTGAC----TTAACACAATTAATATATTTAAACATCTATTAAAACTGAAATACATTTGTTCCCATCTATAGAG----AGGGAAGTTTCTCACATGTTCTCTACAAACACTGGCTCCTTGGTTACAAGAAACACTTTCACATTTTCTAGTCCCACAGGCTATTCAC---CA-ACTCTTATGTTTTGT-CATGAAGACTAAGCTTAGCTCATAGTGGCAAATATACCACTTACTCAGTCATTCCTTCA-AAACGATTTATTAACTGCTTAGATAATAACCATGTAAACAAGTATATTC---ATAATTACAAGAACTCGTACGTCATGAAGTAAAGAAAC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11505052 375 - 12463322 TAATTTTTGGCCTGATTAGT-TTAATGTTCATATTAAGGCTTTTCATAATCAATTTGTGAC----TTAACACAATTAATATATTTAAACATCTATTAAAACTGAAATACATCTGTGCCCATCTATAGAG----AGGGAAGTTTCTCACATGTTCTCTACAAACACTGGCTCCTTGGTTACAAGAAACACTTTCACATTTTCTAGCCCCACAGGCTATTCAC---CA-ACTCCTATGTTTTGT-CATGAAGACTAAGCTTAGCTCATAGTGGCAAATATACCACTTACTCAGTCATTCCTTCA-AAACCATTTATTAACTGCTTGGATAATAACCATGTAAACAAGTATATTC---ATAATTACAAGAACTCGTACGTCATGAAGTAAAGAAAC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156334621 366 + 157873769 TAATTTTTGGCCTGATCAATATTAATGTTCATATAAAGGCTTTTCATAATCAATTTGTGAC------AACAC----AATATATTTAAACATCTATTAAAACTGAAATACATTTGTGCCCATTTATAGAG----AGGGAAGTTTCTCACATGTTCTCTACAAACACTGGCTCATTGGTTACAAGAAACACTTTCACATTTTCTAATCCCAGAGGCTATTCAC---CA-ACTCTTATGTTTTGT-CATGAAGACTAAGCTTGGCTCATAGTGGCAAATATACCACTT----AGTCATTCCTTCA-AAACGATTTATTAACTGCTTAGATAATAACCATGTAAACAAGTATATTC---ATAATTACAAGAACTTGTATGTCATGAAGTAAAGAAAC i nomLeu3.chr3 C 0 I 2 s rheMac8.chr4 170360736 371 + 172585720 TAATTTTTGGCCTGATCAACATTAATGCTCATATAAGGGCTTTTCATAATCAATTTGTGAC------AACACAATTAATATATTGAAACATCTATTAAAACTGAAATGCATTTGTGCCCATCTATAGAG----AAGGAAGTTTCTTACATGTTCTTTACAAACACTAGCTCGTTGGTTACAAGAAACACTTTCACATTTTCTAATCCCAGAGGCTATTCAC---CA-ACTCTTATGTTTTGT---TGAACAT-AAGCTTAGCTCATCGTGGCAAATATACCACTTACTCAATCATTCCTTCA-AAACAATTTATTAACTGCTTGGATAATAACCATGTAAACAAGTATATTC---ATAATTACAAGAACTCGCATGTCATGAAGTAAAGAAAC i rheMac8.chr4 C 0 I 2 s macFas5.chr4 169106154 371 - 170955103 TAATTTTTGGCCTGATCAACATTAATGCTCATATAAGGGCTTTTCATAATCAATTTGTGAC------AACACAATTAATATATTGAAACATCTATTAAAACTGAAATGCATTTGTGCCCATCTATAGAG----AGGGAAGTTTCTTACATGTTCTTTACAAACACTAGCTCGTTGGTTACAAGAAACACTTTCACATTTTCTAATCCCAGAGGCTATTCAC---CA-ACTCTTATGTTTTGT---TGAACAT-AAGCTTAGCTCATCGTGGCAAATATACCACTTACTCAATCATTCCTTCA-AAACAATTTATTAACTGCTTGGATAATAACCATGTAAACAAGTATATTC---ATAATTACAAGAACTCGCATGTCATGAAGTAAAGAAAC i macFas5.chr4 C 0 I 2 s macNem1.NW_012011000v1 8392347 371 + 10161646 TAATTTTTGGCCTGATCAACATTAATGCTCATATAAGGGCTTTTCATAATCAATTTGTGAC------AACACAATTAATATATTGAAACATCTATTAAAACTGAAATGCATTTGTGCCCATCTATAGAG----AGGGAAGTTTCTTACATGTTCTTTACAAACACTAGCTCGTTGGTTACAAGAAACACTTTCACATTTTCTAATCCCAGAGGCTATTCAC---CA-ACTCTTATGTTTTGT---TGAACAT-AAGCTTAGCTCATCGTGGCAAATATACCACTTACTCAATCATTCCTTCA-AAACAATTTATTAACTGCTTGGATAATAACCATGTAAACAAGTATATTC---ATAATTACAAGAACTCGCATGTCATGAAGTAAAGAAAC i macNem1.NW_012011000v1 C 0 I 2 s cerAty1.NW_012002071v1 1424042 371 + 3144229 TAATTTTTGGCCTGATCAACATTAATGCTCATATAAGGGCTTTTCATAATCAATTTGTGAC------AACACAATTAATATATTTAAACATCTATTAAAACTGAAATGCATTTGTGCCCATCTATAGAG----AGGGAAGTTTCTTACATGTTCTTTACAAACACTAGCTTGTTGGTTACAAGAAACACTTTCACATTTTCTAATCCCAGAGGCTATTCAC---CA-ACTCTTATGTTTTGT---TGAACAT-AAGCTTAGCTCATCGTGGCAAATATACCACTTACTCAATCATTCCTTCA-AAACAATTTATTAACTGCTTGGATAATAACCATGTAAACAAGTATATTC---ATAATTACAAGAACTCGTATGTCATGAAGTAAAGAAAC i cerAty1.NW_012002071v1 C 0 I 2 s chlSab2.chr13 96710433 371 + 98384682 TAATTTTTGGCCTGATCAACATTAATGCTCATATAAGGGCTTTTCATAATCAATTTGTGAC------AACACAATTAATATATTTAAACATCTATTAAAACTGAAATGCATTTGTGCCCATCTATAGAG----AGGGAAGTTTCTTACATGTTCTTTACAAACACTAGCTCGCTGGTTACAAGAAACGCTTTCACATTTTCTAATCCCAGAGGCTATTCAC---CA-ACTCTTATGTTTTGT---TGAACAT-AAGCTTAGCTCATCGTGGCAAATATACCACTTACTCAATCATTCCTTCA-AAACAATTTATTAACTGCTTGGATAATAACCATGTAAACAAGTATATTC---ATAATTACAAGAACTCGTATGTCATGAAGTAAAGAAAC i chlSab2.chr13 C 0 I 2 s manLeu1.NW_012106474v1 8246186 371 - 10857215 TAATTTTTGGCCTGATCAACATTAATGCTCATATAAGGGCTTTTCATAATCAATTTGTGAC------AACACAATTAATATATTTAAACATCTATTAAAACTGAAATGCATTTGTGCCCATCTATAGAG----AGAGAAGTTTCTTACATGTTCTTTACAAACACTAGCTTGTTGGTTACAAGAAACACTTTCACATTTTCTAATCCCAGAGGCTATTCAC---CA-ACTCTTATGTTTTGT---TGAACAT-AAGCTTAGCTCATCGTGGCAAATATACCACTTACTCAATCATTCCTTCA-AAACAATTTATTAACTGCTTGGATAATAACCATGTAAACAAGTATATTC---ATAATTACAAGAACTCGTACGTCATGAAGTAAAGAAAC i manLeu1.NW_012106474v1 C 0 I 2 s colAng1.NW_012114488v1 15635640 374 - 23502949 TAATTTTTGGCCTGATCAACATTAATGCTCATATAAGGGCTTTTCATAATCAATTTGTGAC------AACACAATTAATATATTTAAACATCTATTAAAACTGAAATGCATTTGTGCCCATCTATAGAG----AGGGAAGTTTCTGACATGTTCTTTACAAACACTAGCTCGTTGGTTACAAGAAACACTTTCACATTTTCTAATCCCAGAGGCTATTCAC---CA-ACTCTTATGTTTTGT-CATGAAGACAAAGCTTAGCTCATAGTGGCAAATATACCACTTACTCAATCATTCCTTCA-AAACAATTTATTAACTGCTTGGATAATAACCATGTAAACAAGTATATTC---ATAATTGCAAGAACTTGTATGTCATGAAGTAAAGAAAC i colAng1.NW_012114488v1 C 0 I 2 s calJac3.chr4 169919114 377 + 171630274 CAGTTTTTAGCCTGATCGATACTAACGCTCCCATAAGGGCTTTTCGTGATCAATGTGTGAC----TTAACAC----AATATATTTAAGCATCTATTAAAACGGAAATACACTCGTGCCCATCTGTAGAAGGATAAGGACGTTTCTCCCATGTTCTCTGCAAACACTAGCTCACTGGTGGCGAGAAACACTTTCCCAGTGTGTAATGCCAG-GGCTGTTCACGATGA-ACTCGTACGTGTTGGTCATGAAGACCAGGCCTAGCTTGTCGTGGCAAATATACTG-CTTTTCAGTCATCCTTTCC-AAACCGCTTAGTAACTGCCTGGCTAATAACCACGTAAACAAGTACATTC---ACAACGGCAAGAACT-ATATGTCATGAAGGAAAGAAAC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1320611 377 - 2905041 CAGTTTTTAGCCTGATCAACACTAACGCTCACATAAGGGCTTTTCATGATCAATGGGTGAT----TTAACAC----AATGTATTTAAGCATCTATTAAAACGGAAATACATTTGTGCCCATCTATAGAAGGAGAAAGAAATTTCTCCCATGTTCTCTACAAACACTAGCTCATTGGTGATAAGAAACACTTTCCCATTTTCTAATCCCAGAGGCTGTTCAC---GA-ACTCGTACATTTTGAACATGAAGACTAGACCTAGCTTGCAGTGGCAAACACACCACCTTTTCAGTCATCCTTTCA-AAGCTGTTTATTAACTGCTTGGCTAATAACCACGTTAACAAGTACATTC---ATAACTGCAAGAACTCATATGTCATGAAGTAAAGAAAC i saiBol1.JH378287 C 0 I 2 s cebCap1.NW_016107695v1 1283506 370 - 2164891 CAGTTTTTAGCCTGATCAATATTAACACTCACATAATGGCTTTTCATGGTCAACGGGTGAC----TTAACAC----AATGTATTTAGGCATCTGTTAAAACTGCAATACATTTGTGCCCATCTATAGAAG---AAGGAAATTTCTCCCATGTTCTCTACAAACACTAGCTCATTGGTGATAAGAAACA----CCCATTTTCTAACCCCAGAGGCTGTTCAC---TA-ACTCGTACGTTTTGGTCATGAATACTAGGCCTAGCTTGCAGTGGCAAACATACCACTTTTTCAGTCATTCTTTCA-AAACTGTGTATTAACTGCTTGGCTAATAACCACGTAAACAAGTACATTC---ATAACTGCAAGAACTCATATGCCATGAAGTAAAGAAAC i cebCap1.NW_016107695v1 C 0 I 2 s aotNan1.NW_018494782v1 1530874 376 - 1813869 CAGTTTTTAGCCTGATCAATATTAACGCTCACATAAGGGCTTTTCATTATCAACGTGTGAC----TTAACGC----AATATATTTAAGCATCTATTAAAACTGAAATACATTTGTGCCCATCTATAGAAGGAGAAGGACATTTCTCCCATGTTCTCTACAAACACTAGCTCATTGGTGATAAGAAACACTTTCCCATTTTCTAATCCCAGAGGCTGTTCAC---TG-ACTCGTACGTTTTGGTCGTGAAGACTAGGCCTAGCGTGTAG-GGCAAACATACCACTCTCTCAGTCATCCTTTCA-AAACTGTTTATGAACTGCTTGGCTAATAACCACGTAAACAAGTTCATTC---ATAACTGCAAGAACTCATATGTCATGAAGTAAAGAAAC i aotNan1.NW_018494782v1 C 0 I 15 s canFam3.chr1 56198592 371 + 122678785 TAATTTTTGGTCTGATCAATAGCAGTGCTCACA-GAGAGCTTTCCAACATCCACTTGTGAGGGtttttttttaaataatatatttaatCATTTA-GAAAACTGAAATACATGTATGGCCATAGAAAGAT----AAGGAAGTTCCTCACATGTTCTCCATATA-AATAGCTCACTGATTAACAGAAACATG-----GTTTTCCAGACCCAGAGGCTGTCCAT---GAGACTCTTATGTTTTGGTCATGAAGACTGAGCTTAACTCCTAGTAGTGAACAT-TCATTT------TCATTTATTCATAAAACATGAATTACTTGGATAGGCAACAATCAAGTAAAGCAGCACATTTTGAACTATTACAATACCTCTTGTGCTCTAAAATGAGGGAAT i canFam3.chr1 I 187 I 2 e otoGar3.GL873575 10971741 156 - 12073884 I e dasNov3.JH569188 595835 1351 + 760995 I a score=104547.000000 s hg38.chr6_KB021644v2_alt 132834 14 + 185823 TGTGATACAATTGC s panTro5.chr6 173589099 14 + 175400573 TGTGATACAATTGC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171822626 14 + 173848474 TGTGATACAGTTGC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11505427 14 - 12463322 TGTGATACAATTGC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156334989 14 + 157873769 TGTGATGTCATTGC i nomLeu3.chr3 I 2 C 0 s rheMac8.chr4 170361109 14 + 172585720 CGTGATGTAATTAC i rheMac8.chr4 I 2 C 0 s macFas5.chr4 169106527 14 - 170955103 CGTGATGTAATTAC i macFas5.chr4 I 2 C 0 s macNem1.NW_012011000v1 8392720 14 + 10161646 CGTGATGTAATTAC i macNem1.NW_012011000v1 I 2 C 0 s cerAty1.NW_012002071v1 1424415 14 + 3144229 CGTGATGTAATTAC i cerAty1.NW_012002071v1 I 2 C 0 s chlSab2.chr13 96710806 14 + 98384682 CGTGATGTAATTAC i chlSab2.chr13 I 2 C 0 s manLeu1.NW_012106474v1 8246559 14 - 10857215 CGTGATGTAATTAC i manLeu1.NW_012106474v1 I 2 C 0 s colAng1.NW_012114488v1 15636016 14 - 23502949 CGTGATGTAATTAC i colAng1.NW_012114488v1 I 2 C 0 s calJac3.chr4 169919491 14 + 171630274 TGTGAGGTAATTGC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1320990 14 - 2905041 TGTGAGGTAATTGC i saiBol1.JH378287 I 2 C 0 s cebCap1.NW_016107695v1 1283878 14 - 2164891 TGTGACGTAATTGC i cebCap1.NW_016107695v1 I 2 C 0 s canFam3.chr1 56198965 13 + 122678785 TGTGATGTAATGC- i canFam3.chr1 I 2 C 0 e otoGar3.GL873575 10971741 156 - 12073884 I e aotNan1.NW_018494782v1 1531250 15 - 1813869 I e dasNov3.JH569188 595835 1351 + 760995 I a score=4258178.000000 s hg38.chr6_KB021644v2_alt 132848 471 + 185823 CCTAATAATAGAGAAACTCAttagagagtgtgtttgtagaatgtctggctgtgcaagtaatatttaagctaatatttaaaggatgagaagaaattgttcactaaggaactgaagaatt----------------------------------------------------------------aagaagtaaacattccagaacattccaggtataaggaaccttgtgcc-aaattccctaggataagaaagaatttt-tcagc--atgtcaaaataactgaacgaagccagtgtggatggattttagtaat-caggcgacagtgatatggaaggggt-aggagtgaaagcaggaaag-----ggtgccatgtagagtactgcagaccaagttaagccacgagcctgggtttt--atacattgcaatggggagacgttgaaacagcatagtcaggagtgg-ctgacataattcat-aggt-aaaaagataac--tgtgacctgaattac-cagcggattaaagaggggaagagagggcaaaagaagaatccaggg s panTro5.chr6 173589113 471 + 175400573 CCTAATAATAGAGAAACTCATTAGAGAGTGTGTTTGTAGAATGTCTGCCTGTGCaagtaatatttaagctaatatttaaaggaggagaagaaattgttcactagggaactgaagaatt----------------------------------------------------------------aagaagtaaacattccagaacattccaggcataaggaaccttgtgcc-aaattccctaggataagaaagaatttt-tcagc--atgtcaaaataactgaacgaagccggtgtggatggattttagtaat-caggcgacagtgatatggaaggggt-aggagtgaaagcaggaaag-----ggtgccacgtagagtactgcagaccaagttaagccacgaacctgggtttt--atacattgcaatggggagacattgaaacagcatagtcaggagtgg-ctgacataattcat-aggt-aaaaagataac--tgtgacctgagttac-cagcggattaaagaggggaagagagggcaaaagaagaatccaggg i panTro5.chr6 C 0 C 0 s panPan2.chr6 171822640 471 + 173848474 CCTAATAATAGAGAAACTCATTAGAGAGTGTGTTTGTAgaatgtttgcctgtgcaagtaatatttaagctaatatttaaaggaggagaagaaattgttcactagggaactgaagaatt----------------------------------------------------------------aagaagtaaacattccagaacattccaggcataaggaaccttgtgcc-aaattccctaggataagaaagaatttt-tcagc--atgtcaaaataactgaacgaagccggtgtggatggattttagtaat-caggcaacagtgatatggaaggggt-aggagtgaaagcaggaaag-----ggtgccacgtagagtactgcagaccaagttaagccacgaacctgggtttt--atacattgcaatggggagacattgaaacagcatagtcaggagtgg-ctgacataattcat-aggt-aaaaagataac--tgtgacctgaattac-cagcggattaaagaggggaagagagggcaaaagaagaatccaggg i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11505441 471 - 12463322 CCTAATAATAGAGAAACTCAttagagagtgtgtttgtagaatgtctggctgtgcaagtaatatttaagctaatatttaaaggatgagaagaaattgttcactaaggaactgaagaatt----------------------------------------------------------------aagaagtaaacattccagaacattccaggcataaggaaccttgtgcc-aaattccctaggataagaaagaatttt-tcagc--atgtcaaaataactgaacgaagccggtgtggatggattttagtaat-caggcgacagtgatatggaaggggt-aggagtgaaagcaggaaag-----ggtgccacgtagagtactgcagaccaagttaagccacgagcctgggtttt--atacattgcaatggggagacattgaaacagcatagtcaggagtgg-ctgacataattcat-aggt-aaaaagataac--tgtgacctgaattac-cagcggattaaagaggggaagagagggcaaaagaagaatccaggg i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156335003 459 + 157873769 CCTAATAATAGAGAAACTCAttagagagcgtgtttgtagaaggtccagctgtacaagtaatatttaagctattatttaaaagatgagaagaaattgttcactaaggagctgaagaatt----------------------------------------------------------------aagaagta----------aacattccaggcataaggaaccttgtgcc-aaattccctaggataagaaagaatttt-ccagc--atgtcaaaataactgaaagaagccggtgtggatggattttagtaat-caggtgatagtgatatggaaggggt-aggagtgacggcaggaaag-----ggtgccacatagagtactgcagaccaagttaagccaagagcctgggtttt--atacattgcaatggggagacattgaaactgcatagtcaggagt-g-ctgacgtaattcat-aggt--aaaagat-ac--tgtgacctgaattactcagcggattaagaggggaagaagagggcaaaagaagaatccaggg i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170361123 466 + 172585720 CCTAATAATAGAGAAACTCAttagagagtgtgtttgtagaaggtccggctgtccaagtaatatttaagctaatacttaaaggatgagaagaaattgttcactaaggagctgaagaata----------------------------------------------------------------aagaagta----------aacattccaggcgtaaggaaccttgtgcc-aaattccctaggataacaaagaatttt-ttggc--atgtcaaagtaactgaaagaagccggtgtggatggattttagtaat-caggtgatagtgatatggaaggggt-aggagtgaaagcaggaaaggaaacggtgccacatagagtactgcagaccaagttaagccaagagcctgtgtttt--atacattgcaatggggagacattgaaacagcatagtcaggagtgg-cagacctaattcat-aggt-aaaaagataac--tgtgacctgaattac-cagcggattaaagaggggaagagagggcaaaagaagaatccaggg i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169106541 466 - 170955103 CCTAATAATAGAGAAACTCAttagagagtgtgtttgtagaaggtccggctgtccaagtaatatttaagctaatacttaaaggatgagaagaaattgttcactaaggagctgaagaata----------------------------------------------------------------aagaagta----------aacattccaggcgtaaggaaccttgtgcc-aaattccctaggataacaaagaatttt-ttggc--atgtcaaagtaactgaaagaagccggtgtggatggattttagtaat-caggtgatagtgatatggaaggggt-aggagtgaaagcaggaaaggaaagggtgccacatagagtactgcagaccaagttaagccaagagcctgtgtttt--atacattgcaatggggagacattgaaacagcatagtcaggagtgg-cagacctaattcat-aggt-aaaaagataac--tgtgacctgaattac-cagcggattaaagaggggaagagagggcaaaagaagaatccaggg i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8392734 466 + 10161646 CCTAATAATAGAGAAACTCAttagagagtgtgtttgtagaaggtccggctgtccaagtaatatttaagctaatacttaaaggatgagaagaaattgttcactaaggagctgaagaata----------------------------------------------------------------aagaagta----------aacattccaggcgtaaggaaccttgtgcc-aaattccctaggataacaaagaatttt-ttggc--atgtcaaagtaactgaaagaagccagtgtggatgggttttagtaat-caggtgatagtgatatggaaggggt-aggagtgaaagcaggaaaggaaagggtgccacatagagtactgcagaccaagttaagccaagagcctgtgtttt--atacattgcaatggggagacattgaaacagcatagtcaggagtgg-cagacctaattcat-aggt-aaaaagataac--tgtgacctgaattac-cagcggattaaagaggggaagagagggcaaaagaagaatccaggg i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1424429 460 + 3144229 CCTAATAATAGAGAAACTCAttagagagtgtgtttgcagaaggtccggctgtgcaagtaatatttaagctaatacttaaaggatgagaagaaattgttcactaaggaactgaagaata----------------------------------------------------------------aagaagta----------aacattccaggcgtaaggaaccttgtgcc-aaattccctgggacaacaaagaatttt-tcagc--atgtcaaagtaactgaaagaagctggtgtggatggattttagtaat-caggtgatagtgatatggaaggggt-aggagtgaaagcaggaaaggaaagggtgccacatagagtactgcagaccaagttaagccaagagcctgtgtttt--gtacattgcaatggggagacattgaaacagcat------gagtgg-ctgacataattcat-aggt-aaaaagataac--tgtgacctgaattac-cagtggattaaagaggggaagagagggcaaaagaagaatccaggg i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96710820 462 + 98384682 CCTAATAATAGAGAAACTCATTAGAGAGTGTGTTTGTAGAAGGTCCGGCTGTGCaagtaatatttaagctaatacttaaaggatgagaagaaattgttcactaaggagctgaagaata----------------------------------------------------------------aagaagta----------aacattccaggcctaaggaaccttgtacc-aaattccctaggataacaaagaatttt-ttggcatatgtcaaagtaactgaaagaagccggtgtggatggattttagtaat-caggtgatagtgatatggaaggggt-aggagtgaaagcaggaaaggaaagggtgccacatagagtactgcagaccaagttaagccaagagcctgtgtttt--gtacattgcaatgggcagacattgaaacagcat------gagtgg-ctgacataattggt-aggt-aaaaagataac--tgtgacctgaattac-cagtgaattaaagaggggaagagagggcaaaagaagaatccaggg i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8246573 466 - 10857215 CCTAATAATAGAGAAACTCAttagagagtgtgtttgtagaaggtccggctgtgcaagtaatatttaagctaatacttaaaggatgagaagaaattgttcactaaggaactgaagaata----------------------------------------------------------------aagaagta----------aacattccaggcgtaaggaaccttgtgcc-aaattccctgggataacaaagaatttt-tcagc--atgtcaaagtcactgaaagaagctggtgtggatggattttagtaat-caggtgatagtgatatggaaggggt-aggagtgaaagcaggaaaggaaagggtgccacatagagtactgcagaccaagttaagccaagagcctgtgtttt--gtacattgcaatggggagacattgaaacagcatagtcaggagtgg-cagacctaattcat-aggt-aaaaaggtaac--tgtgacctgaattac-cagcggattaaagaggggaagagagggcaaaagaagaatccaggg i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15636030 466 - 23502949 CCTAATAATAGAGAAACTCACtagagagtgtgtttgtagaaggtctggctgtgcaagtaatatttaagctaatgcttaaaggatgagaagaaattgttcactaaggagctgaagaata----------------------------------------------------------------aagaagta----------aacattccaggcataaggaaccttgtgcc-aaattccctaggataagaaataatttt-tcagc--atgtcaaagtaactgaaagaagcccatgtggatggattttagtaat-cgggtgatagtgatctggaaggggt-aggagtgaaagcaggaaaggaaagggtgccacctagagtactgcagaccaagttaagccaagagcctgtgtttt--atacactgcaatggggagacattgaaacagcatagtcaggagtgg-ctgacataattcat-aggt-gaaaagataac--tgtgacctgaattac-caggggattaaagaggggaagagagggccaaagaagaatccaggg i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169919505 445 + 171630274 CCTAATAAT----AAACTCATGAGAGA--GTGTTTAGGGAAGATCCGGCTGTACaagtaatatttaagctgatatttaga-gatgagaggaaattgttcactaaggagctgaagaatt----------------------------------------------------------------aagaagta----------aacattccaggcataaggaaccttgtgct-acattccctaggataggaaggaattttttcagc--ttgtcaacataactgaaagaagccggcgtgcatggaccgtagtcat-cagggcacagtggtaTGGACGGGGG-AGGGATGAAAGCGGGAGAG-----GGCGCCGTGTGGAA-ACTGCAGACCTGGTCAATCCAAGAGCCTGGGTCTT--ACCCGCCGCAGTGGGCAGACATTGAAACAGTGTAGACAGGCGTGG-C-----TAATCCAC-AGGTTAAAAAGGTGAC----TGCTCTGAATCAC-CAGCAGATTAAGAGGGG--AGAGAGGGCAGCAGAAGAATCC-GGG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1321004 487 - 2905041 CCTAATAATAGAGAAACTCAT--TAGA--GTGTTTATAGAAGATCCAGCTGTACAAGTAATATTTAAGCTGATATTTAAAGGATGAGAAGTAATTGTTCACTAAGgagctgaagaattaagaagtaaacatc---------------------------------aaaagaaaaagaaggagaagaagta----------aacattccaggcataaggaaccttgtgct-aaattccctaggataggaacgaattttttcagc--atgtcaaaataactgaaagaagccggtgtgcatggactgtagtcat-caggggacagtgatgtggacagggg-agggatgaaagcaggagag-----ggtgccatgtggaa-actgcagaccccgttaacccaggagcctgggtttt--atatgccgcagtgggcagacattgaaacagtgtagacaggagtgg-ctgtcgtaatctgc-aggttaaaaagatggc--tgtgctctgaatcac-cagcaggttaagagggg--agagagggcagcagaagaatccgggg i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1283892 517 - 2164891 CCTAACAGA---GAAACTCATTAGAGA--GTGTTTGTAGAAGATCCAGTTGTACAAGGAATATTTAAGCTGATATTTAAAGGATGAGAAGAAATTGTTCACTAAGGAGCTGAAGAATTAAGAAGTAAACATTCCAAAAAAAAAAAAANNNNNNNNNNNNNNNAAAAAAAAAAAAAAaagaagcagaagta----------gacattccaggcataaggaaccttgcgct-aaattccctaggataggaaagaattttttcagc--atgtcaaaataactgaaagaagccggcgtgcatggattgtagtaat-caggggacagtgatgtggacggggg-agggatggaagcaggagag-----ggtgccatgtggga-actgcagacctggttaatccaggagcctgggt-tt--atacgccgcagcgggcagacattgaaacagtatagacaggagtgg-ctgttgtcatccac-aggttagaatgatggc--tgtgctctgaatcac-cagcagattaagagggg--agagaaggcagcagaagaatcc-agg i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1531265 455 - 1813869 CCTCATAACAGAGAAACTCATTAGaga--gtgtttacagaagatccagctgtacacgtaatatttaagctgatatttaaaggatgagaagaaattgttcaccaaggggctgaagaatt----------------------------------------------------------------aagaagca----------aacattccaggcagaaggaaccttgtgct-aaactccctaggata-gaaagagttttctcagc--atgtcgaaataactgaaagaagccggtgtgcatggactgtagtgat-caggggacagtgatatggacgggg---gggatgaaagcaggagag-----ggtgccatgtggaa-actgcagaccccgttaatccaagagcctgggtttt--atacgccacagtgggcagatggtgaaacagtgtaggcaggagtgg-ccgttgtaatgcac-aggttaaaaagatggc--cgtgctctgaatcac-cagcagattaagagggg--agagagggcagcagaagaatccaggg i aotNan1.NW_018494782v1 I 15 C 0 s canFam3.chr1 56198978 453 + 122678785 ---CATAGGAGAGAAAGTCACTAGAGACTGTATTTATGAAAAGTACAGCCATGCAAGCAATATTGGAGCTGATACCTA-CGGATGAAAATAACTTAATTACAAACGAGCTGATGAATT----------------------------------------------------------------AAGAAATA----------AATATTTT-GACATAAAGAAACCTATGATGAGATTCCCTAGGAtgggacagagtgtt-ttggc--gtctcaaaataagagaaagaagtctacgtggatggagtttaatactccaattgagggtgatatcgaggtggtcaggggcagaagcagga--------ggtgagttgtggag---agcagaccaaactagg----aactctgggttttagagatattgggatggaaggacattgaaaggttatagtcaggggtaatctgatataatttatgagat-aaacagatagcccttccccctgaattgc-caaagggttaaagaggA--CTCTTGGACAGTAGAGTAATCAAGGG i canFam3.chr1 C 0 I 74 e otoGar3.GL873575 10971741 156 - 12073884 I e dasNov3.JH569188 595835 1351 + 760995 I a score=711379.000000 s hg38.chr6_KB021644v2_alt 133319 74 + 185823 ggctcattgggagaagctaaggctgtgtgggcggcaggttt--ttgtgacttggactcgggttagggcagtggaga s panTro5.chr6 173589584 74 + 175400573 ggctcattgggagaagctaaggctgtgtgggcggcaggttt--tcgtgacttggactcgggttagggcagtggaga i panTro5.chr6 C 0 C 0 s panPan2.chr6 171823111 74 + 173848474 ggctcattgggagaagctaaggctgtgtgggcggcaggttt--tcgtgacttggactcgggttagggcagtggaga i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11505912 74 - 12463322 ggctcattgggagaagctaaggctgtgtgggcggcaggttt--tcgtgacttggactcgggttagggcagtggaga i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156335462 74 + 157873769 ggctcatcgggagaaactaaggctgtgtgggtggcaggttt--tcatgacttggactcgggttagggcagtggaga i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170361589 74 + 172585720 ggctcactgggagaagctaaggctgtgtaggtggcaggttt--tcgtgacttggactcgggttagggcagtggaga i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169107007 74 - 170955103 ggctcactgggagaagctaaggctgtgtaggtggcaggttt--tcgtgacttggactcgggttagggcagtggaga i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8393200 74 + 10161646 ggctcactgggagaagctaaggctgtgtaggtggcaggttt--tcgtgacttggactcgggttagggcagtggaga i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1424889 74 + 3144229 ggctcactgggagaagctaaggctgtgtaggtggcaggttt--ttgtgacttggactcgggttagggctgtggaga i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96711282 74 + 98384682 ggctcactgggagcagctaaggctgtgtaggtggcaggttt--tcgtgacttggactcgggttggggcagtggaga i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8247039 74 - 10857215 ggctcactgggagaagctaaggctgtgtaggtggcaggttt--tcgtgacttggacttgggttagggcagtggaga i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15636496 74 - 23502949 ggctcactgggagaagctaaggctgtggaggtggcaggctt--ttgtgacttggactcgggttagggcagtggaga i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169919950 76 + 171630274 GGCTCATCGGGAGCAGGTAGGGCTGTGTAGGTGGCGGGTTTTGTTGTGACTTGGACTAGGGTGAGAGTGGTGGAGA i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1321491 76 - 2905041 ggctcatcgggagcagggaaggctgtgtaggtggcgggttttgttgtgacttggactagggtgagagcagtggaga i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1284409 76 - 2164891 ggctcatcgggagcaggtaaggctgtgtgggtggtgagttttgttgtgacttggactagggtgagagcagtggaga i cebCap1.NW_016107695v1 C 0 I 87 s aotNan1.NW_018494782v1 1531720 76 - 1813869 ggctcatcgggagcaggtaaggctgtgtcggtggcgggttttgttgtgacttggactagggtgagagcagtggaga i aotNan1.NW_018494782v1 C 0 I 87 e otoGar3.GL873575 10971741 156 - 12073884 I e dasNov3.JH569188 595835 1351 + 760995 I e canFam3.chr1 56199431 74 + 122678785 I a score=367492.000000 s hg38.chr6_KB021644v2_alt 133393 61 + 185823 tatggaagtTCCTGGCTGTTCAAGAACCCAGTCAGGCTCAGTGGGTTGTGTCATAAGAAAT s panTro5.chr6 173589658 61 + 175400573 tatggaagtTCCGGGCTGTTCAAGAACCCGGTCAGGCTCAGTGGGTTGTGTCATAAGAAAT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171823185 61 + 173848474 tatggaagtTCCAGGCTGTTCAAGAACCCGGTCAGGCTCAGTGGGTTGTGTCATAAGAAAT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11505986 61 - 12463322 tatggaagtTCCTGGCCGTTCAAGAACCCGGTCAGGCTCAGTGGGTTGTGTCATAAGAAAT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156335536 61 + 157873769 tatggaagtTCCTGGCCGTTCAAGAACCTGGTCTGGCTCGGTGGGTTGTGTCATAAGAAAT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170361663 61 + 172585720 tgtgaagaTTCCTGACAGTTGAAGATCCTGGACAGGCTCAGTGGGCTGTGTCATAAGAAAT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169107081 61 - 170955103 tgtggagaTTCCTGACAGTTGAAGATCCTGGACAGGCTCAGTGGGCTGTGTCATAAGAAAT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8393274 61 + 10161646 tgtggagaTTCCTGACAGTTGAAGATCCTGGACAGGCTCAGTGGGCTGTGTCATAAGAAAT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1424963 61 + 3144229 tgtggagaTTCCTGACAGTTGAAGAACCTGGACAGGCTCAGTGGGCTGTGTCATAAGAAAT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96711356 61 + 98384682 tgtggagaTTCCTGACAGTTGAAGAACCTGGACGGGCTCAGTGGGCTGTGTCATAAGAAAT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8247113 61 - 10857215 tgtggagaTTCCTGACAGTTGAAGATCCTGGACAGGCTCAGTGGGCTGTGTCATAAGAAAT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15636570 61 - 23502949 tgtggagaTTCCTGACAGTTGAAGAACCTGGACAGGCTCGGTGGGCTGTGTCATAAGAAAT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169920026 58 + 171630274 GGTGCAGGT---GAACTGTTGGAGAACCGGGCCAGGGTCAGCAGGCTGCGCCGTAAGAAAT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1321567 58 - 2905041 ggcgaaggt---ggatggttcgagaACCGGGTCAGGGTCAGCAGTCCGGGCCGTAAGAAAT i saiBol1.JH378287 C 0 C 0 e otoGar3.GL873575 10971741 156 - 12073884 I e aotNan1.NW_018494782v1 1531796 87 - 1813869 I e cebCap1.NW_016107695v1 1284485 87 - 2164891 I e dasNov3.JH569188 595835 1351 + 760995 I e canFam3.chr1 56199431 74 + 122678785 I a score=69583.000000 s hg38.chr6_KB021644v2_alt 133454 11 + 185823 ACGCTCTGGGg s panTro5.chr6 173589719 11 + 175400573 ACGCTCTGGGg i panTro5.chr6 C 0 C 0 s panPan2.chr6 171823246 11 + 173848474 ACGCTCTAGGg i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11506047 11 - 12463322 ACGCTCTGGGg i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156335597 11 + 157873769 ACACTCTGGGg i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170361724 11 + 172585720 ACGTTCTGGAg i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169107142 11 - 170955103 ACGTTCTGGAg i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8393335 11 + 10161646 ACGTTCTGGAg i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1425024 11 + 3144229 ACGCTCTGGAg i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96711417 11 + 98384682 ACGCTCTGGAg i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8247174 11 - 10857215 ACGCTCTGGAg i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15636631 11 - 23502949 ACACTCTGGAg i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169920084 11 + 171630274 ACGCTCTGGGG i calJac3.chr4 C 0 C 0 e otoGar3.GL873575 10971741 156 - 12073884 I e saiBol1.JH378287 1321625 0 - 2905041 C e aotNan1.NW_018494782v1 1531796 87 - 1813869 I e cebCap1.NW_016107695v1 1284485 87 - 2164891 I e dasNov3.JH569188 595835 1351 + 760995 I e canFam3.chr1 56199431 74 + 122678785 I a score=1504979.000000 s hg38.chr6_KB021644v2_alt 133465 279 + 185823 gccaggcgcggtggctcacacctgtaatcccagcactttgggaggccgaggcaggcagatcacaaggtcaggagttcaagaccagactgaccaatatggtgaaaccctgtctctactg------aaaaaaaaaattag-ctgggcatggtgtcacgcacctgtagtcccagctacttgggagactgaggcaggagaatcgcttgaacccgggaggtggaggttgcagtaagccaagatcacgccactgcactccagcctggtgacagagcgagactccgtctcaaa s panTro5.chr6 173589730 285 + 175400573 gccgggcgcggtggcttacacctgtaatcccagcactttgggaggccgaggcaggcagatcacaaggtcaggagttcaagaccagactgaccaatatggtgaaaccctgtctctactgaaaaaaaaaaaaaaaattag-ctgggcatggtgtcacgcacctgtagtcccagctacttgggagactgaggcaggagaatcgcttgaacccgggaggtggaggttgcagtgagccaagatcacgccactgcactccagcctggtgacagagcgagactccgtctcaaa i panTro5.chr6 C 0 C 0 s panPan2.chr6 171823257 284 + 173848474 gccgggcgcggtggcttacacctgtaatcccagcactttgggaggccaaggcaggcagatcacaaggtcaggagttcaagaccagactgaccaatatggtgaaaccctgtctctactg--aaaaaaaaaaaaaattagactgggcatggtgtcacgcacctgtagtcccagctacttgggagactgaggcaggagaatcgcttgaacccgggaggtggaggttgcagtgagccaagatcacgccactgcactccagcctggtgacagagcgagactccgtctcaaa i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11506058 282 - 12463322 gccgggcgcggtggctcacacctgtaatcccagcactttgggaggccgaggcaggcagatcacaaggtcaggagttcaagaccagactgaccagtatggtgaaaccctgtctctactg---aaaaaaaaaaaaattag-ctgggcatggtgtcacgcacctgtagtcccagctacttgggagactgaggcaggagaatcgcttgaacccgggaggtggaggttgcagtgagccaagatcacgccactgcactccagcctggtgacagagcgagactccgtctcaaa i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156335608 280 + 157873769 gctgggcatggtggctcacacctgtaatcccagcactttgggaggccgaggcaggcagatcacgaggtcaggagttcaagaccagactga----tatggtgaaaccctgtctctactgaaaaaaacaaaaaaaattag-ctgggcgtggtgtcacgcacctgtagtcccagctacttgggagactgaggcaggagaattgcttgaactctggaagt-gaggttgcagtgagccaagatcacgccactgcactccagcctggcgacagagcgagactccgtatcaaa i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170361735 282 + 172585720 gctgggcgcagtggctcacacctgtattcccagcactttgggaggctgaggcactcagattaccaggtcaggagttcaagactagactgaccaatacggtgaaaccctgtctctactg---aaaaaaacaaaaattag-ccgggcgtggtggcaggcgcctgtaatcccagctactcgggaggctgaggcaggagaatcacttgaacccgggaggcagaggttgcagtgaactgagatcgcgctgctgcactccagcctggtgacaaagtgagactccatctcaaa i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169107153 282 - 170955103 gctgggcgcagtggctcacgcctgtattcccagcactttgggaggctgaggcactcagattaccaggtcaggagttcaagactagactgaccaatacggtgaaaccctgtctctactg---aaaaaaacaaaaattag-ccgggcgtggtggcaggcgcctgtaatcccagctactcgggaggctgaggcaggagaatcacttgaacccgggaggcagaggttgcagtgaactgagatcgcgctgctgcactccagcctggtgacaaagtgagactccatctcaaa i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8393346 282 + 10161646 gctgggcgcagtggctcacgcctgtattcccagcactttggcaggctgaggcactcagattaccaggtcaggagttcaagactagactgaccaatacggtgaaaccctgtctctactg---aaaaaaacaaaaattag-ccgggtgtggtggcaggcgcctgtaatcccagctactcgggaggctgaggcaggagaatcgcttgaacccgggaggcagaggttgcagtgaactgagatcgcgctgctgcactccagcctggtgacaaagtgagactccatctcaaa i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1425035 280 + 3144229 gctgggcacggtggcacacg--tgtattcccagcactttgggaggctgaggcatgcagatcacgaggtcaggagttcaagactagcctgaccaatatggtgaaaccctgtctctactg---aaaaaaacaaaaattag-ccggacatggtggcaggcacctgtaatcccagctactcaggaggctgaggcaggagaatcgcttgaacccgggaggcagaggttgcagtgaactgagatcgcgccgctgcactccagcctggtgacaaagcgagactccatctcaaa i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96711428 283 + 98384682 gctgggcgcagtggctcacgcctgtattcccggcactttgggaggctgaggcactcagatcacgaggtcaggagttcaagactagcctgaccaatacggtgaaactctgtctctactg--aaaaaaaacaaaaattag-ccgggcgtggtggcgggtgcctgtaatcccagctactcgggaagctgaggcaggagaatcgcttgaacccgggaggcagaggttgcagtgaactgagatcgcgcagccgcactccagcctggtgacaaagcaagactccatctcaaa i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8247185 280 - 10857215 gctgggcacggtgg--cacacttgtattcccagcactttgggaggctgaggcatgcagatcacgaggtcaggagttcaagactagcctgaccaatatggtgaaaccctgtctctactg---aaaaaaacaaaaattag-ccgggcatggtggcaggcacctgtattcccagctactcgggaggctgaggcaggagaatcgcttgaacccgggaggcagaggttgcagtgaactgagatcgcgccgctgcactccagcctggtgacaaagcgagactccatctcaaa i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15636642 282 - 23502949 gccgggcacggtggctcacgcctgtattcccagcactttgggaggccgaggcatgcagatcacgaggtcaggagttcaagactagcctgaccaatatggtgaaaccctgtctctactg---aaaaaaacaaaaattag-ccgggcatggtggcaggcgcctgtaatcacagctactcgggaggctgaggcaggagaatcgcttgaacccgggaggcagaggttgcagtgaactgagatcgtgccaccgccctccagcctggtgacagagcgagactctgtctcaaa i colAng1.NW_012114488v1 C 0 I 17 e otoGar3.GL873575 10971741 156 - 12073884 I e saiBol1.JH378287 1321625 0 - 2905041 C e aotNan1.NW_018494782v1 1531796 87 - 1813869 I e cebCap1.NW_016107695v1 1284485 87 - 2164891 I e calJac3.chr4 169920095 0 + 171630274 C e dasNov3.JH569188 595835 1351 + 760995 I e canFam3.chr1 56199431 74 + 122678785 I a score=4095.000000 s hg38.chr6_KB021644v2_alt 133744 1 + 185823 a s panTro5.chr6 173590015 1 + 175400573 a i panTro5.chr6 C 0 C 0 s panPan2.chr6 171823541 1 + 173848474 a i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11506340 1 - 12463322 a i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156335888 1 + 157873769 a i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170362017 1 + 172585720 a i rheMac8.chr4 C 0 I 156 s macFas5.chr4 169107435 1 - 170955103 a i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8393628 1 + 10161646 a i macNem1.NW_012011000v1 C 0 I 126 s chlSab2.chr13 96711711 1 + 98384682 a i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8247465 1 - 10857215 a i manLeu1.NW_012106474v1 C 0 C 0 e otoGar3.GL873575 10971741 156 - 12073884 I e saiBol1.JH378287 1321625 0 - 2905041 C e aotNan1.NW_018494782v1 1531796 87 - 1813869 I e cebCap1.NW_016107695v1 1284485 87 - 2164891 I e calJac3.chr4 169920095 0 + 171630274 C e dasNov3.JH569188 595835 1351 + 760995 I e colAng1.NW_012114488v1 15636924 17 - 23502949 I e canFam3.chr1 56199431 74 + 122678785 I e cerAty1.NW_012002071v1 1425315 0 + 3144229 C a score=2730.000000 s hg38.chr6_KB021644v2_alt 133745 2 + 185823 ta s panTro5.chr6 173590016 2 + 175400573 aa i panTro5.chr6 C 0 C 0 s panPan2.chr6 171823542 2 + 173848474 aa i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11506341 2 - 12463322 aa i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156335889 2 + 157873769 aa i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169107436 1 - 170955103 -a i macFas5.chr4 C 0 I 138 s cerAty1.NW_012002071v1 1425315 1 + 3144229 -a i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96711712 1 + 98384682 -a i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8247466 1 - 10857215 -a i manLeu1.NW_012106474v1 C 0 C 0 e otoGar3.GL873575 10971741 156 - 12073884 I e saiBol1.JH378287 1321625 0 - 2905041 C e aotNan1.NW_018494782v1 1531796 87 - 1813869 I e cebCap1.NW_016107695v1 1284485 87 - 2164891 I e calJac3.chr4 169920095 0 + 171630274 C e dasNov3.JH569188 595835 1351 + 760995 I e colAng1.NW_012114488v1 15636924 17 - 23502949 I e canFam3.chr1 56199431 74 + 122678785 I e macNem1.NW_012011000v1 8393629 126 + 10161646 I e rheMac8.chr4 170362018 156 + 172585720 I a score=1697.000000 s hg38.chr6_KB021644v2_alt 133747 2 + 185823 gc s panTro5.chr6 173590018 2 + 175400573 ac i panTro5.chr6 C 0 C 0 s panPan2.chr6 171823544 2 + 173848474 ac i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11506343 2 - 12463322 ac i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156335891 2 + 157873769 aa i nomLeu3.chr3 C 0 C 0 s cerAty1.NW_012002071v1 1425316 2 + 3144229 ac i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96711713 1 + 98384682 -c i chlSab2.chr13 C 0 I 1 s manLeu1.NW_012106474v1 8247467 1 - 10857215 -c i manLeu1.NW_012106474v1 C 0 I 1 e otoGar3.GL873575 10971741 156 - 12073884 I e saiBol1.JH378287 1321625 0 - 2905041 C e aotNan1.NW_018494782v1 1531796 87 - 1813869 I e cebCap1.NW_016107695v1 1284485 87 - 2164891 I e calJac3.chr4 169920095 0 + 171630274 C e dasNov3.JH569188 595835 1351 + 760995 I e colAng1.NW_012114488v1 15636924 17 - 23502949 I e canFam3.chr1 56199431 74 + 122678785 I e macNem1.NW_012011000v1 8393629 126 + 10161646 I e rheMac8.chr4 170362018 156 + 172585720 I e macFas5.chr4 169107437 138 - 170955103 I a score=2357.000000 s hg38.chr6_KB021644v2_alt 133749 8 + 185823 -aaa------caaac s panTro5.chr6 173590020 7 + 175400573 -aaa-------aaac i panTro5.chr6 C 0 I 6 s panPan2.chr6 171823546 6 + 173848474 -aa--------aaac i panPan2.chr6 C 0 I 6 s gorGor5.CYUI01015032v1 11506345 8 - 12463322 -aaa------caaac i gorGor5.CYUI01015032v1 C 0 I 4 s nomLeu3.chr3 156335893 14 + 157873769 -aaaaaaaaaaaaaa i nomLeu3.chr3 C 0 I 6 s macFas5.chr4 169107575 7 - 170955103 -aaa-------aaag i macFas5.chr4 I 138 C 0 s cerAty1.NW_012002071v1 1425318 8 + 3144229 aaag-------aaag i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96711715 7 + 98384682 -aag-------aaag i chlSab2.chr13 I 1 C 0 s manLeu1.NW_012106474v1 8247469 7 - 10857215 -aag-------aaag i manLeu1.NW_012106474v1 I 1 C 0 e otoGar3.GL873575 10971741 156 - 12073884 I e saiBol1.JH378287 1321625 0 - 2905041 C e aotNan1.NW_018494782v1 1531796 87 - 1813869 I e cebCap1.NW_016107695v1 1284485 87 - 2164891 I e calJac3.chr4 169920095 0 + 171630274 C e dasNov3.JH569188 595835 1351 + 760995 I e colAng1.NW_012114488v1 15636924 17 - 23502949 I e canFam3.chr1 56199431 74 + 122678785 I e macNem1.NW_012011000v1 8393629 126 + 10161646 I e rheMac8.chr4 170362018 156 + 172585720 I a score=5330.000000 s hg38.chr6_KB021644v2_alt 133757 9 + 185823 --aaacaaaca s panTro5.chr6 173590033 9 + 175400573 --aaacaaaaa i panTro5.chr6 I 6 C 0 s panPan2.chr6 171823558 8 + 173848474 --aaacaaa-a i panPan2.chr6 I 6 C 0 s gorGor5.CYUI01015032v1 11506357 8 - 12463322 --aaacaaa-a i gorGor5.CYUI01015032v1 I 4 C 0 s nomLeu3.chr3 156335913 9 + 157873769 --aaaaaaaaG i nomLeu3.chr3 I 6 C 0 s macFas5.chr4 169107582 9 - 170955103 aaaagaaaa-- i macFas5.chr4 C 0 I 1 s cerAty1.NW_012002071v1 1425326 9 + 3144229 aaaagaaaa-- i cerAty1.NW_012002071v1 C 0 I 1 s chlSab2.chr13 96711722 9 + 98384682 aaaagaaaa-- i chlSab2.chr13 C 0 I 1 s manLeu1.NW_012106474v1 8247476 9 - 10857215 aaaagaaaa-- i manLeu1.NW_012106474v1 C 0 I 1 s colAng1.NW_012114488v1 15636941 8 - 23502949 -aaagaaaa-- i colAng1.NW_012114488v1 I 17 I 1 e otoGar3.GL873575 10971741 156 - 12073884 I e saiBol1.JH378287 1321625 0 - 2905041 C e aotNan1.NW_018494782v1 1531796 87 - 1813869 I e cebCap1.NW_016107695v1 1284485 87 - 2164891 I e calJac3.chr4 169920095 0 + 171630274 C e dasNov3.JH569188 595835 1351 + 760995 I e canFam3.chr1 56199431 74 + 122678785 I e macNem1.NW_012011000v1 8393629 126 + 10161646 I e rheMac8.chr4 170362018 156 + 172585720 I a score=33943.000000 s hg38.chr6_KB021644v2_alt 133766 4 + 185823 aaaC s panTro5.chr6 173590042 4 + 175400573 AAAC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171823566 4 + 173848474 aaAC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11506365 4 - 12463322 aaac i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156335922 4 + 157873769 AAAC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170362174 4 + 172585720 aaaC i rheMac8.chr4 I 156 C 0 s macFas5.chr4 169107592 4 - 170955103 aaaC i macFas5.chr4 I 1 C 0 s macNem1.NW_012011000v1 8393755 4 + 10161646 aaaC i macNem1.NW_012011000v1 I 126 C 0 s cerAty1.NW_012002071v1 1425336 4 + 3144229 aaaC i cerAty1.NW_012002071v1 I 1 C 0 s chlSab2.chr13 96711732 4 + 98384682 aaaC i chlSab2.chr13 I 1 C 0 s manLeu1.NW_012106474v1 8247486 4 - 10857215 aaaC i manLeu1.NW_012106474v1 I 1 C 0 s colAng1.NW_012114488v1 15636950 4 - 23502949 AAAC i colAng1.NW_012114488v1 I 1 C 0 s canFam3.chr1 56199505 4 + 122678785 AAAC i canFam3.chr1 I 74 I 1 s dasNov3.JH569188 597186 4 + 760995 AAAC i dasNov3.JH569188 I 1351 C 0 e otoGar3.GL873575 10971741 156 - 12073884 I e saiBol1.JH378287 1321625 0 - 2905041 C e aotNan1.NW_018494782v1 1531796 87 - 1813869 I e cebCap1.NW_016107695v1 1284485 87 - 2164891 I e calJac3.chr4 169920095 0 + 171630274 C a score=80006.000000 s hg38.chr6_KB021644v2_alt 133770 11 + 185823 ---ATGCTCTGGGA s panTro5.chr6 173590046 11 + 175400573 ---ATGCTCTGGGA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171823570 11 + 173848474 ---ATGCTCTGGGA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11506369 11 - 12463322 ---aTGCTCTGGGA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156335926 11 + 157873769 ---ATGCTCTGGGA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170362178 11 + 172585720 ---GTGCTCTGGGA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169107596 11 - 170955103 ---GTGCTCTGGGA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8393759 11 + 10161646 ---GTGCTCTGGGA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1425340 11 + 3144229 ---ATGTTCTGGGA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96711736 11 + 98384682 ---ATGCTCTGGGA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8247490 11 - 10857215 ---ATGTTCTGGGA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15636954 11 - 23502949 ---ATGCTCTGGGA i colAng1.NW_012114488v1 C 0 C 0 s saiBol1.JH378287 1321625 11 - 2905041 ---ATGCTCTGGGG i saiBol1.JH378287 C 0 C 0 s canFam3.chr1 56199510 11 + 122678785 ---GTGCTCCAGGA i canFam3.chr1 I 1 C 0 s dasNov3.JH569188 597190 12 + 760995 ACTACTCTTTGG-- i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10971741 156 - 12073884 I e aotNan1.NW_018494782v1 1531796 87 - 1813869 I e cebCap1.NW_016107695v1 1284485 87 - 2164891 I e calJac3.chr4 169920095 0 + 171630274 C a score=103847.000000 s hg38.chr6_KB021644v2_alt 133781 18 + 185823 AGGCG-TGCCTTG----CTGAAT s panTro5.chr6 173590057 17 + 175400573 A-GTG-TGCCTTG----CTGAAT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171823581 17 + 173848474 A-GCG-TGCCTTG----CTGAAT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11506380 18 - 12463322 AGGCG-TGCCTTG----CTGAAT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156335937 18 + 157873769 AGGCA-TGCCTTG----CTGAAT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170362189 18 + 172585720 AGGCA-TGACTTG----CTGAAT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169107607 18 - 170955103 AGGCA-TGACTTG----CTGAAT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8393770 18 + 10161646 AGGCA-TGACTTG----CTGAAT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1425351 18 + 3144229 AGGCA-TGACTTG----CTGAAT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96711747 18 + 98384682 AGGCA-TGACTTG----CTGAAT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8247501 18 - 10857215 AGGCA-TGACTTG----CTGAAT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15636965 18 - 23502949 AGGCA-TGACTTG----CTGAAT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169920095 17 + 171630274 AGGCA-TGAGTTG----CT-AAA i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1321636 18 - 2905041 AGGCC-TGAGCTG----CTGAAG i saiBol1.JH378287 C 0 C 0 s canFam3.chr1 56199521 17 + 122678785 ------TGACATGGGAACGAAAT i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 597202 19 + 760995 AGACAGTGTTTTA----TTGAGC i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10971741 156 - 12073884 I e aotNan1.NW_018494782v1 1531796 87 - 1813869 I e cebCap1.NW_016107695v1 1284485 87 - 2164891 I a score=445752.000000 s hg38.chr6_KB021644v2_alt 133799 43 + 185823 CCTTAAAAACATCTGAATGTGAAGATCAGGTAGA--AGGCAACAC s panTro5.chr6 173590074 43 + 175400573 CCTTAAAAACATCTGAATGTGAAGATCAGGTAGA--AGGCAACGC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171823598 43 + 173848474 CCTTAAAAACATCTGAATGTGAAGATCAGGTAGA--AGGCAACGC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11506398 43 - 12463322 CCTTAAAAACATCTGAATATGAAGATCAGGTAGA--AGGCAACGC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156335955 43 + 157873769 CCTTAAAAACATCTGAATTTGAAAATCAGGTAAA--AGGCAACAC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170362207 43 + 172585720 CCTTAAAAACGTCTGAACGTGAAGATCAGGTAGA--AGGCAACAC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169107625 43 - 170955103 CCTTAAAAACGTCTGAACGTGAAGATCAGGTAGA--AGGCAACAC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8393788 43 + 10161646 CCTTAAAAACGTCTGAACGTGAAGATCAGGTAGA--AGGCAACAC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1425369 43 + 3144229 CCTTAAAAACATCTGAATGTGAAGATCAGGTAGA--AGGCAACAC i cerAty1.NW_012002071v1 C 0 I 1 s chlSab2.chr13 96711765 43 + 98384682 CCTTAAAAACATCTGAATGTGAAGATCAGGTAGA--AGGCAACAC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8247519 43 - 10857215 CCTTAAAAACATCTGAATGTGAAGATCAGGTAGA--AGGCAACAC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15636983 43 - 23502949 CCTTAAAAACATCTGAACGTGAAGATCAGGTAGA--AGGCAACAC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169920112 43 + 171630274 GCCTAAACACATCTGAAGTTAAAGATCAGGCAGA--AAGCAACAC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1321654 43 - 2905041 GCTTAAACACGTCTGAATTTAAAGATCAGGCAGG--AAGCAGCGC i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1284572 43 - 2164891 CCTTAAACACATCTGAATTTAAAGATCAGGTAGA--AAGCAACAC i cebCap1.NW_016107695v1 I 87 C 0 s aotNan1.NW_018494782v1 1531883 43 - 1813869 CCTTAAACACATCTGAGTTTAAAGATCAGGTAGA--AGGCAACAC i aotNan1.NW_018494782v1 I 87 I 19 s canFam3.chr1 56199538 31 + 122678785 CCCTAAAATCACC------------TCAGGTAGA--AGATAAACT i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 597221 45 + 760995 CCAGAAAAGCACCTGCATTTAAAAATTAGGTAAACTAGGAAGTGC i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10971741 156 - 12073884 I a score=9145.000000 s hg38.chr6_KB021644v2_alt 133842 2 + 185823 AC s panTro5.chr6 173590117 2 + 175400573 AC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171823641 2 + 173848474 AC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11506441 2 - 12463322 GC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156335998 2 + 157873769 AC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170362250 2 + 172585720 AC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169107668 2 - 170955103 AC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8393831 2 + 10161646 AC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1425413 2 + 3144229 GC i cerAty1.NW_012002071v1 I 1 C 0 s chlSab2.chr13 96711808 2 + 98384682 GC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8247562 2 - 10857215 GC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15637026 2 - 23502949 GC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169920155 2 + 171630274 AC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1321697 2 - 2905041 GC i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1284615 2 - 2164891 AC i cebCap1.NW_016107695v1 C 0 I 41 s canFam3.chr1 56199569 2 + 122678785 GC i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 597266 1 + 760995 A- i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10971741 156 - 12073884 I e aotNan1.NW_018494782v1 1531926 19 - 1813869 I a score=128641.000000 s hg38.chr6_KB021644v2_alt 133844 22 + 185823 TT-CTGAGCCAGCATAGAAGGAA s panTro5.chr6 173590119 23 + 175400573 TTGCTGAGCCAGCATAGAAGGAA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171823643 23 + 173848474 TTGCTGAGCCAGCATAGAAGGAA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11506443 23 - 12463322 TTGCTGAGCCAGCATGGAAGGAA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156336000 23 + 157873769 TTGCTGTGCCAGCATAGAAGGAG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170362252 23 + 172585720 TTGCTGTGACAGCGTAGAAAGGG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169107670 23 - 170955103 TTGCTGTGACAGCGTAGAAAGGG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8393833 23 + 10161646 TTGCTGTGACAGCGTAGAAAGGG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1425415 23 + 3144229 TTGCTGTGACAGCGTAGAAAGGG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96711810 23 + 98384682 TTGCTGTGACAGCGTAGAAAGGG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8247564 23 - 10857215 TTGCTGTGACAGCGTAGAAAGGG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15637028 23 - 23502949 TTGCTGTGATAGCATAGAAAGGG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169920157 19 + 171630274 CTGCTCTGACGACGCAGAG---- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1321699 19 - 2905041 CTGCTCTGACGACACAGGG---- i saiBol1.JH378287 C 0 C 0 s canFam3.chr1 56199571 23 + 122678785 TTGCTGTGAATACATAGAAGGAA i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 597267 22 + 760995 -TGCTATAAAGATGTAAAAGGAC i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10971741 156 - 12073884 I e aotNan1.NW_018494782v1 1531926 19 - 1813869 I e cebCap1.NW_016107695v1 1284617 41 - 2164891 I a score=76514.000000 s hg38.chr6_KB021644v2_alt 133866 22 + 185823 CAGATAGAGA-------------------------------------------------------GGTTAGGGAGAC s panTro5.chr6 173590142 22 + 175400573 CAGATAGAGA-------------------------------------------------------GGTTAGGGAGAC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171823666 22 + 173848474 CAGATAGAGA-------------------------------------------------------GGTTAGGGAGAC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11506466 22 - 12463322 CAGATAGAGA-------------------------------------------------------GGTTAGGGAGAC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156336023 22 + 157873769 CAGATAGAAA-------------------------------------------------------GGTTAGGGAGAC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170362275 67 + 172585720 CAGATAGAAAGG-TAGGGAAACAGGTCCTTGGCTTCAGAGCCGTCTCGTCT---------TCCTCGGTTAGGGAAAC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169107693 67 - 170955103 CAGATAGAAAGG-TAGGGAAACAGGTCCTTGGCTTCAGAGCCGTCTCATCT---------TCCTCGGTTAGGGAAAC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8393856 67 + 10161646 CAGATAGAAAGG-TAGGGAAACAGGTCCTTGGCTTCAGAGCCGTCTCGTCT---------TCCTCGGTTAGGGAAAC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1425438 22 + 3144229 CAGATAGAAA-------------------------------------------------------GGTTAGGGAAAC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96711833 22 + 98384682 CAGATAGAAA-------------------------------------------------------GGTTAGGGAAAC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8247587 22 - 10857215 CAGATAGAAA-------------------------------------------------------GGTTAGGGAAAC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15637051 68 - 23502949 CAGATAGAAAGGTTAGGGAAATAGGTCCTCGGCTTCAGAG---------CCGTCTCGTCTTCCTCGGTTAGGGAAAC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169920176 22 + 171630274 CAGATGGAAA-------------------------------------------------------GCTCAGGAAAAG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1321718 22 - 2905041 CAGATGGAAA-------------------------------------------------------CCTTAGGAGAAG i saiBol1.JH378287 C 0 C 0 s aotNan1.NW_018494782v1 1531945 22 - 1813869 CAGATGGAAA-------------------------------------------------------GGTTAGGAAAAG i aotNan1.NW_018494782v1 I 19 C 0 s canFam3.chr1 56199594 21 + 122678785 CAAATAGGTG-------------------------------------------------------CAAGAAGGAGA- i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 597289 22 + 760995 CAAATAGAGA-------------------------------------------------------GGAAGGAAAGAA i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10971741 156 - 12073884 I e cebCap1.NW_016107695v1 1284617 41 - 2164891 I a score=2212235.000000 s hg38.chr6_KB021644v2_alt 133888 240 + 185823 AGGTGCTCGGCTTCAGAGTCATCTTCTG------------TTCCTC----------------------------------------------ATTGCCAGCTGGGTGTCCTGGAGGAAACAT--TGGTgatctgatggtgggttggaggagagcagaatgcagaggacgccatgaggatttccagctcatgtgacttgctgcaggatggtga-----attgaaatt---agaactcttagagaaagtggtttctgaaaaacaacctg--aagatgtacactttttgtgtattgagtttcaaatgctggta s panTro5.chr6 173590164 240 + 175400573 AGGCGCTCGGCTTCAGAGTCGTCTTCTG------------TTCCTC----------------------------------------------ATTGCCAGCTGGGTGTCCTGGAGGAAACAT--TGGTgatctgatggtgggttggaggagagcagaatgcagaggacgtcatgaggatttccagctcatgttacttgctggaggatagtga-----attgaaatt---agaactcttagagaaagtggtttctgaaaaacaacctg--aagatgtacactttttgtgtattgagtttcaaatgctggta i panTro5.chr6 C 0 C 0 s panPan2.chr6 171823688 240 + 173848474 AGGCGCTCGGCTTCAGAGTCGTCTTCTG------------TTCCTC----------------------------------------------ATTGCCAGCTGGGTGTCCTGGAGGAAACAT--TGGTgatctgatggtgggttggaggagagcagaatgcagaggacgccatgaggatttccagctcatgtgacttgctggaggatggtga-----attgaaatt---agaactcttagagaaagtggtttctgaaaaacaacctg--aagatgtacgctttttgtgtattgagtttcaaatgctggta i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11506488 240 - 12463322 AGGCGCTCGGCTTCAGAGTCGTCTTCTG------------TTCCTC----------------------------------------------ATTGCCAGCTGGGTGTCCTGGAGGAAACAC--TGGTgatctgatggtgggttggaggagagcagaatgcagaggacgccatggggatttccagctcatgtgacttgctgcgggatggtga-----attgaaatt---agaactcttagagaaagtggtttctgaaaaacaacctg--aagatgtacactttttgtgtattgagtttcaaatgctggta i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156336045 237 + 157873769 AGGTGCTCTGCTTCAAACTCGTCTTCTG------------TTCCTC----------------------------------------------ATTTCCAGCTGGGCGTCCTGGaggaaa-----tgttgatctgagggtgggttggaggagagcagaatgcagaggatgccatgaggatttccagctcatgtgatttgctggaggatggtga-----actgaaatt---agaactcttagagaaagtggtttctgagaaacaacctg--aagatgtacactttttgtgtattgagtttgaaatgctggta i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170362342 240 + 172585720 AGGTCCTTGGCTTCAGAGTCGTCTCCTC------------TTCCTC----------------------------------------------ATTTCCAGCTGGGTGTCCTGTAGGAAACAT--TGGTgatctgatggtgggttgcaggacagtggaaggcagaggatgccatgaggatttccagctcatgcgacttgctggaggatggtga-----attgaaatt---agaactcttagagaaagtggtttctgaaaaacaacctg--aagatgtacactttttatgtattgagtttcaaatgctggta i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169107760 240 - 170955103 AGGTCCTTGGCTTCAGAGTCGTCTCCTC------------TTCCTC----------------------------------------------ATTTCCAGCTGGGTGTCCTGGAGGAAACAT--TGGTgatctgatggtgggttgcaggacagtggaaggcagaggatgccatgaggatttccagctcatgcgacttgctggaggatggtga-----attgaaatt---agaactcttagagaaagtggtttctgaaaaacaacctg--aagatgtacactttttatgtgttgagtttcaaatgctggta i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8393923 240 + 10161646 AGGTCCTTGGCTTCAGAGTCGTCTCCTC------------TTCCTC----------------------------------------------ATTTCCAGCTGGGTGTCCTGGAGGAAACAT--TGGTgatctgatggtgggttgcaggacagtggaaggcagaggatgccatgaggatttccagctcatgcgacttgctggaggatggtga-----attgaaatt---agaactcttagagaaagtggtttctgaaaaacaacctg--aagatgtacactttttatgtattgagtttcaaatgctggta i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1425460 240 + 3144229 AGGTCCTCGGCTTCAGAGTCATCTCCTC------------TTCCTC----------------------------------------------ATTTCCAGCTGGGTGTCCTGGAGGAAACAT--TGGTgatctgatggtgggttggaggagagtgggaggcagaggatgccatgaggatttccagctcatgcgacttgctggaggatggtga-----attgaaatt---agaactcttagagaaagtggtttctgaaaaacaacctg--aagatgtacactttttgtgtattgagtttcaaatgctggta i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96711855 240 + 98384682 AGGTCCTTGGCTTCAGAGTCGTCTCCTC------------TTCCTC----------------------------------------------ATTTCCAGCTGGGTGTCCTGGAGGAAACAT--TGGTgatctgatggtgggttggaggagagtggaaggtagaggatgccatgaggatttccagctcatgcgacttgctggaggatggtga-----attgaaatt---agaactcttagagaaagtggtttctgaaaaacaacctg--aagatgtacactttttgtgtattgagtttcaaatgctggta i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8247609 240 - 10857215 AGGTCCTCGGCTTCAGAGTCATCTCCTC------------TTCCTC----------------------------------------------ATTTCCAGCTGGGTGTCCTGGAGGAAACAT--TGGTgatctgatggtgggttggaggagagtgggaggcagaggatgccatgaggatttccagctcatgcgacttgctggaggatggtga-----attgaaatt---agaactcttagagaaagtggtttctgaaaaacaacctg--aagatgtacactttttgtgttttgagtttcaaatgctggta i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15637119 286 - 23502949 AGGTCCTTGGCCTCAGAGTCGTCTCCTC------------TTCCTCGGTTGGGGAAACAGGTCCTCGGCCTCAGAGCCGTCTCCTCTTCCTTATTTCCAGTTGGGTGTCCTGGAGGAAACAT--TGGTgatctgatggtgggttggaggagagtggaaggcagaggatgccatgaggatttccagctcatgtgacttgctggaggatggtga-----attgaaatt---agaactcttagagaaattggtttctgaaaaacaacctg--aagatgtacactttttgtgtattgagtttcaaatgctggta i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169920198 240 + 171630274 AGGCGCTCGGCTTCAGAGTGGGCTTCTG------------GTCCTG----------------------------------------------ATTTCCAGCTGGGTGGCCTGGACGAGAtgc--tggtgatctgacggtgggttggaggaggagggagtggggaggatggctcgaggatttccagctcgggtgacttggcggggaatggtga-----attgaaact---agaactcttagagaaagcggtttttgaaaaaccacatt--aaggtgtacacattctgtgcactgactttcgaatgctggta i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1321740 238 - 2905041 AGGTGCCCGGCTTCAGAGTCGGCTTCTG------------GTCCTG----------------------------------------------ATTTCCAGCTGGGTGGCCTGGATGACACGC--GGGTGACCTGACGGCCGGTTGAAGGAGAGGCGAGTGGGGAGGATGCCT-GAGGATTTCCAGCTTGGGTGACTTGGC-CGGAATGGTGC-----ATTGAAAGT---AGAACTCTTAGAGAAAGCGGTTTTTGAAAAACCACATG--AAGGTGTACACAGTCTGTGTACTGAGTTTCAAATGTTGCTA i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1284658 240 - 2164891 AGGTGCTCGGCTTCAGAGCCGGCTTCTG------------GTCCTG----------------------------------------------ATTTCCAGCTGGGTGGCCTGGACGAGACgc--tggtggcctgacggtgggttggaggagacaggagtgggggggatggctcgaggatttccagcttcggtgatttggcggggaatggtga-----attgaaagt---agaactcttagagaaagcggtttttgaaaaatcacatg--aaggtgtacacattctgtgtactgcgtttcaaatgctggta i cebCap1.NW_016107695v1 I 41 C 0 s aotNan1.NW_018494782v1 1531967 240 - 1813869 AGGCGCTCGGCGTCAGAgtcggcttctg------------gtcctg----------------------------------------------atttccagctgggtggcctggacgagacgc--tggtgacctgacggtgggttggaggagcagggagtggggaggatggctcgaggatttccagcttgggtgacttggcggggaacggtga-----attgaaact---agaactcttagagaaagcggtttttgaaaaaccacatg--aagctgtacacattctgtgtactgagtttcaaatgctggta i aotNan1.NW_018494782v1 C 0 C 0 s canFam3.chr1 56199615 149 + 122678785 ------GCTGTTCCACAACAACCCCATG----------------------------------------------------------------ATTCCCACCTGAATCTACAA----------------GGTCTGATGATGGGTTGGAGGAAGGGGGATGACAGAGCGTG---------------------GTGACATG----------------------GAAACA---AGGCCTGTGAGGGGATGTGGCTGGAGAAGAACAGCACA--gagatgtgca---------------------------ggtg i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 597311 232 + 760995 CGGTATTTGGCTAGAGAGTTGTTTTCTAGTCAACTATAATCTCATG----------------------------------------------ATTTCTAACTGGGTACTCTGGAGAAAGCACCATGAAGGTATGATAATGATTTGGagga----------------atgacttaagggtgtctgggtagggtcatt------------gtgatatttattgagattatgataactgttacagcaagtggt----acaaaaaaacctgcaaagatgtacagtttttcagtattatgtttaaaatattggtg i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10971741 156 - 12073884 I a score=2669099.000000 s hg38.chr6_KB021644v2_alt 134128 248 + 185823 --agatattttagttggaaatgacaaataggtgattga--atatatatgatttgggaattctaatgtatgttctgggctggagggagaacttttggaatca---gca---cacagatgagattt-aaagccgtg-ggagtccataaaatta---ccct--ggtagtgaTCTTCTCAATTTAATGCATATTTCTGGTGATTTCTTTTCCCTTACTTCAATCTGCAGTT--CACCAGGTATAATTggctaagtagtgaccccagagata s panTro5.chr6 173590404 248 + 175400573 --agatattttagttggaaatgacaaataggtgattga--atatatatgatttgggaattctaatgtatgttctgggctggagggagaacttttggaatca---gca---cacagatgagattt-aaagccgtg-ggagtccataaaatta---ccct--ggtagtgaTCTTCTCAATTTAATGCATATTTCTGGTGATTTCTTTTCCCTTACTTCAATCTGCAGTT--CACCGGGTATAATTggctgagtagtgaccccagagata i panTro5.chr6 C 0 C 0 s panPan2.chr6 171823928 248 + 173848474 --agatattttagttggaaatgacaaataggtgattga--atatatatgatttgggaattctaatgtatgttctgggctggagggagaacttttggaatca---gca---cacagatgagattt-aaagccgtg-ggagtccataaaatta---ccct--ggtagtgaTCTTCTCAATTTAATGCATATTTCTGGTGATTTCTTTTCCCTTACTTCAATCTGCAGTT--CACCGGGTATAATTggctgagtagtgaccccagagata i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11506728 248 - 12463322 --agatattttagttggaaatgacaaataggtgattga--atatatatgatttgggaatcctaatgtatgttctgggctggagggagaacttttggaatca---gca---cacagatgagattt-aaagccgtg-ggagtccataaaatta---ccct--ggtagtgaTCTTCTCAATTTAATGCATATTTCTGGTGATTTCTTTTCCCTTACTTCAATCTGCAGTT--CACCGGGTATAATTggctgagtagtgaccccagagata i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156336282 248 + 157873769 --agatattttagttggaaatgacaaataggtgattga--atatatatgatttgggaattctaatgtatgttctgggctggagggagaacttttggaatca---gca---cacagatgagattt-aaagccgtg-ggagtccataaaatta---ccct--ggtagtgaTCTTCTCAATTTAATGCATATTTCTGGTGATTTCTTTTCCCTTACTTCAATCTGCAGTT--CACCAGGTATAACTggctgagtagtgaccccagagata i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170362582 248 + 172585720 --agatattttagttggaaatgccaagtaggtgattga--atatatataatttgggaactctaatgtgtgatctagcctggagggagaacttttggaatca---gca---tgcagatgagattt-aaagccgtg-ggggtccgtaaaatta---ccct--ggtagtgGTCTTCTCAATTTAATGCATATTTCTGGTGATTTCTTTTCCCTTACTTCAATCTGCAATT--CACCAGGTATAATTggctgagtagtgaccccagagatg i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169108000 248 - 170955103 --agatattttagttggaaatgccaagtaggtgattga--atatatataatttgggaactctaatgtgtgatctagcctggagggagaacttttggaatca---gca---tgcagatgagattt-aaagccgtg-ggggtccgtaaaatta---ccct--ggtagtgGTCTTCTCAATTTAATGCATATTTCTGGCGATTTCTTTTCCCTTACTTCAATCTGCAATT--CACCAGGTATAATTggctgagtagtgaccccagagatg i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8394163 250 + 10161646 --agatattttagttggaaatgccaagtaggtgattga--atatatataatttgggaactctaatgtgtgatctagcctggagggagaacttttggaatca---gca---tgcagatgagattt-aaagccgtg-ggggtccgtaaaatta---ccct--ggtagtgGTCTTCTCAATTTAATGCATATTTCTGGCGATTTCTTTTCCCTTACTTCAATCTGCAATTCACACCAGGTATAATTggctgagtagtgaccccagagatg i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1425700 248 + 3144229 --agatattttagttggaaatgccaagtaggtgattga--atatatataatttgggaattctaatgtgtgatctagcctggagggagaacttttggaatca---gca---tgcagatgagattt-aaagccgtg-ggggtccgtaaaatta---ccct--ggtagtgGTCTTCTCAATTTAATGCATATTTCTGGTGATTTCCTTTCCCTTACTTCAATCTGCAATT--CACCAGGTATAATTggctgagtagtgaccccagagatg i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96712095 250 + 98384682 --agatattttagttggaaataccaagtaggtgattgaatatatatataatttgggaattctaatgtgtgatctagcctggagggagaacttttggaatca---gca---tgcagatgagattt-aaagccgtg-ggggtctgtaaaattg---ccct--ggtagtgGTCTTCTCAATTTAACGCATATTTCTGGTGATTTCTTTTCCCTTACTTCAATCTGCAATT--CACCAGGTATAATTggctgagtagtgaccccagagatg i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8247849 248 - 10857215 --agatattttagttggaaatgccaagtaggtgattga--atatatataatttgggaattctagtgtgtgatctagcctggagggagaacttttggaatca---gca---tgcagatgagattt-aaagccgtg-ggggtccgtaaaatta---ccct--ggtagtgGTCTTCTCAATTTAATGCATATTTCTGGTGATTTCCTTTCCCTTACTTCAATCTGCAATT--CACCAGGTATAATTggctgagtagtgaccccagagatg i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15637405 247 - 23502949 --agatattttagttggaaatgccaagtaggtgattga--atatatataatttgggaattctaatgtgtgatctagcctggagggagaacttttggaatca---gca---tgcagatgagattt-aaagccgtg-ggagtccataaaatta---ccct--ggtagtgGTCTTCTCAATTTAATGCATATTTCTGGTGATTTATTTTCCCTCACTTCAATCTGCAATT--CACCAGGTATAA-Tggctgagtagtaaccccagagatg i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169920438 229 + 171630274 --agatattttagctggaattgcccaataggtgattgt--atataaatgatttgggaattctaatgtatgttctgggctggagggagaactttcgaa-----------------------atTTAAAAGCCGTG-GGAACCCATAGAATTA--CCCCT--GGTAGTGGTCTTCCTAATTTAATGCATATTCCTGGCGA---TTTTTCCCCGACTTCAATTTACAATT--CACCAGATATAATTGGCT-Catagtgaccccaaagata i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1321978 228 - 2905041 --AGATATTTTAGTTGGAATTGCCCAGTAGGTGATTGA--ATAGATATGATTTGGGAATTCTAATGTATGTTTTGGGCTAGAAGGAGAACTTTTGGG-----------------------ATTT-AAAGCCATG-GGAACCCATAAAATTA--CCCCT--GGTAGTGGTCT---CAATTTAATGCATATTCCTGGCAA-TTTTTTTCCCTGACTTCAATTTGCAATT--CACCAGATATAATTGTctgaatactgaccccaaagata i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1284898 232 - 2164891 --agatatttgagttggaattgcccaataggtgattga--atatatatgatttgggaattctaatgtatgttctgggctagagggagaacttttgga-----------------------attt-aaagccatg-cgaacccataaaatta--ccCCT--GGTAGTGGTCTTCTCAATTTAATGCATATTCCTGGCGATTTTTTTCCCCTGACTTCAATTTGCAATT--CACCAGATATAATTGTctgaatagtgaccccaaagata i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1532207 232 - 1813869 --agatgttttagttggaattgcccaatagctgattga--atatatatgatttgggaattctaatgtatgttctgggctgcagggagaacttttgga-----------------------attt-aaagccgtg-ggaacccataaaatta--ccCCT--GGTAGTGGTCTTCTCAATTTAATGCATATTCCTGGCGATTTTTTTCCCCTGACTTCAATTTGCAATT--CACCAGAtataattggctcaatagtgaccccaaagcta i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10971897 235 - 12073884 --agatgttttaATTGGCGAGTTCCGACGGGTGATTAG--ATATGTGTGACTTGGGAATTCTGAGGTTCATTCTGATCTAG-------------GGAATCAGTGGCA---TGCAGGTAAGATTT-AAA-CTGTG-GGGATACCTAAAAACA---CCCT--GA-AGTGGGCTCCTCAGTTTTATGCATCATCTTGGGCA-TTCCCCCCTCTTACTCTGATTTGTAATT--CACCAGGTATCATTGGTGGCATGGTGAccccacagatg i otoGar3.GL873575 I 156 C 0 s canFam3.chr1 56199764 252 + 122678785 --agacattttgatgggagagttcaaacaggtgagtaa--ctatacatggcctgggggctgtgcagcatgctctgggttggggaggaa---tgtggagtca---gcagcctgcaagtgagatcg-aaagccatgagGAGTGCACAAAACCCCACCCCC--TGCAATGGTTCTGCTGATTTAATGTGTATTTCTGGGCATTTCCTCTTCCTTATCCCATCTTGTAATT--CAGCAGGTATAGTGGACTGATTGGTGGCTCTGAAGATA i canFam3.chr1 C 0 I 101 s dasNov3.JH569188 597543 246 + 760995 tgacatac---agttggagatgtcaggaaggtgactga----atatttgacatggaaattctcagatatgttctggacttgggggagaa-ttttggagtcagtagca---tgcagatgagattt-aaaaccatg-agaacatataaattca---ctctgaggcagtgGTCCTCTCAATGCAATGCATATTTTTGTGTATCCCTTCCCTCTGGCCCCAATTTGTAATT--CACCAGGTATGAC---CTgaatggcgatcctaaagata i dasNov3.JH569188 C 0 C 0 a score=973326.000000 s hg38.chr6_KB021644v2_alt 134376 94 + 185823 acgtgcaggccggcatccttggaacctgggaatgtgagtttgtttggaa-------------agatgggattaagtttaggatctt--gagatgaggtcatcctgggtc s panTro5.chr6 173590652 94 + 175400573 acgtgcaggccggcatccttggaacctgggaatgtgagtttgtttggaa-------------agatgggattaagttcaggatctt--gacatgaggtcatcctgggtc i panTro5.chr6 C 0 I 2 s panPan2.chr6 171824176 94 + 173848474 acgtgcaggctggcatccttggaacctgggaatgtgagtttgtttggaa-------------agatgggattaagttcaggatctt--gagatgaggtcaccctgggtc i panPan2.chr6 C 0 I 2 s gorGor5.CYUI01015032v1 11506976 94 - 12463322 acgtgcaggccggcatccttggaacctgggaatgtgagtttgtttggaa-------------agatgggattaagttcaggatctt--gagatgaggtcatcctgggtc i gorGor5.CYUI01015032v1 C 0 I 2 s nomLeu3.chr3 156336530 92 + 157873769 --gtgcaggccggcatccttggaacccgggaatgtgagtttgtttggaa-------------agatgggattaagttcaggatctt--gagatgaggtcatcccgggtc i nomLeu3.chr3 C 0 I 2 s rheMac8.chr4 170362830 93 + 172585720 -catgcaggccagcatccttggaacctgggaatgtaagtttgtttggaa-------------agatgggattaagttcaggatctt--gagatgaggtcatcctgggtc i rheMac8.chr4 C 0 I 2 s macFas5.chr4 169108248 93 - 170955103 -catgcaggccagcatccttggaacctgggaatgtgagtttgtttggaa-------------agatgggattaagttcaggatctt--gagatgaggtcatcctgggtc i macFas5.chr4 C 0 I 2 s macNem1.NW_012011000v1 8394413 95 + 10161646 -catgcaggccagcatccttggaacctgggaatgtgagtttgtttggaa-------------agatgggattaagttcaggatcttgagagatgaggtcatcctgggtc i macNem1.NW_012011000v1 C 0 I 2 s cerAty1.NW_012002071v1 1425948 93 + 3144229 -catgcaggccagcatccttggaacctgggaatgtgagtttgtttggaa-------------agatgggattaagttcaggatctt--gagatgaggtcatcctgggtc i cerAty1.NW_012002071v1 C 0 I 2 s chlSab2.chr13 96712345 93 + 98384682 -catgcaggccagcatccttggaacctgggaatgtgagtttgtttggaa-------------agatgggattaagttcaggatctt--gagatgaggtcatcctgggcc i chlSab2.chr13 C 0 I 2 s manLeu1.NW_012106474v1 8248097 93 - 10857215 -catgcaggccagcatccttggaacctgggaatgtgagtttgtttggaa-------------agatgggattaagttcaggatctt--gagatgaggtcatcctgggtc i manLeu1.NW_012106474v1 C 0 I 2 s colAng1.NW_012114488v1 15637652 93 - 23502949 -catgcaggccagcatctttggaacctgggaatgtgagtttgtttggaa-------------agatgggattaagttcaggatctt--gagatgaggtcatcctgggtc i colAng1.NW_012114488v1 C 0 I 2 s calJac3.chr4 169920667 93 + 171630274 -cgtgcaagttatcacccttggaacttgggggtgtgattttatttggaa-------------acatgtgagtaagttgaggatctt--gagatgaggtcatcctgggtc i calJac3.chr4 C 0 I 2 s saiBol1.JH378287 1322206 93 - 2905041 -gatgcatgttatcatccttggaacctaggaatgtgagtttatctggaa-------------agatgtgagtgagttggggatctt--gaggtgaggtcatcctgggtc i saiBol1.JH378287 C 0 I 2 s cebCap1.NW_016107695v1 1285130 93 - 2164891 -tgtgcacattatcatccttggaacctgggaatgtgagtttatttggaa-------------agatgtgagtaagttgaggatctt--gagatgaggtcatcctgggtc i cebCap1.NW_016107695v1 C 0 I 2 s aotNan1.NW_018494782v1 1532439 89 - 1813869 -tgtgcaccccatcatccttggaacctgggaatgtgagtttatttggaa-------------agat----gtaagttgaggatgtt--gagatgaggtcgtcctgggtc i aotNan1.NW_018494782v1 C 0 I 14 s otoGar3.GL873575 10972132 99 - 12073884 ---tgcactcccaca-ccttggaacccacaaacaggagcttattttgaaa----gtttgtgcagatgtgatcaggctaaagattga--gagatgagatcattccagatc i otoGar3.GL873575 C 0 C 0 s dasNov3.JH569188 597789 105 + 760995 -tgtctatgtca-caaacctagaaccagcagatattaccttatttggaaaagtggtccttgcagatgtgattaatttaaggatctt--gagaggagatgaccctgcatt i dasNov3.JH569188 C 0 C 0 e canFam3.chr1 56200016 101 + 122678785 I a score=75173.000000 s hg38.chr6_KB021644v2_alt 134470 10 + 185823 ---ctttt--------------ataag s panTro5.chr6 173590748 24 + 175400573 ---ctgttgagccccagatccaaggag i panTro5.chr6 I 2 C 0 s panPan2.chr6 171824272 24 + 173848474 ---ctgttgagccccagatccaaggag i panPan2.chr6 I 2 C 0 s gorGor5.CYUI01015032v1 11507072 24 - 12463322 ---ctgttgggccccagatccaaggag i gorGor5.CYUI01015032v1 I 2 C 0 s nomLeu3.chr3 156336624 24 + 157873769 ---ctgttgggccccagatccaaggag i nomLeu3.chr3 I 2 C 0 s rheMac8.chr4 170362925 24 + 172585720 ---ctgttgggcctcagatccaaggag i rheMac8.chr4 I 2 C 0 s macFas5.chr4 169108343 24 - 170955103 ---ctgttggacctcagatccaaggag i macFas5.chr4 I 2 C 0 s macNem1.NW_012011000v1 8394510 24 + 10161646 ---ctgttggacctcagatccaaggag i macNem1.NW_012011000v1 I 2 C 0 s cerAty1.NW_012002071v1 1426043 24 + 3144229 ---ctgttggacctcagatccaaggag i cerAty1.NW_012002071v1 I 2 C 0 s chlSab2.chr13 96712440 24 + 98384682 ---ctgttgggcctcagatccaaggag i chlSab2.chr13 I 2 C 0 s manLeu1.NW_012106474v1 8248192 24 - 10857215 ---ctgttgggcctcagatccaaggag i manLeu1.NW_012106474v1 I 2 C 0 s colAng1.NW_012114488v1 15637747 24 - 23502949 ---ctgttgggcctcagatccaaggag i colAng1.NW_012114488v1 I 2 C 0 s calJac3.chr4 169920762 9 + 171630274 ---ctgt------------ccaag--- i calJac3.chr4 I 2 I 3 s saiBol1.JH378287 1322301 9 - 2905041 ---ctgt------------ccaag--- i saiBol1.JH378287 I 2 I 3 s cebCap1.NW_016107695v1 1285225 9 - 2164891 ---ctgt------------ccaag--- i cebCap1.NW_016107695v1 I 2 I 3 s otoGar3.GL873575 10972231 2 - 12073884 ---------------------aa---- i otoGar3.GL873575 C 0 C 0 s dasNov3.JH569188 597894 27 + 760995 gtcttggtggaccagaaataccatcac i dasNov3.JH569188 C 0 C 0 e aotNan1.NW_018494782v1 1532528 14 - 1813869 I e canFam3.chr1 56200016 101 + 122678785 I a score=684511.000000 s hg38.chr6_KB021644v2_alt 134480 70 + 185823 cagtgtccttataaaagagaggcag-ggattt--agacacccagagaagcggagggaatatgaggacaaaggc s panTro5.chr6 173590772 70 + 175400573 cagtgtccttataaaagagaggcgg-ggattt--agacacccagagaagcggagggaatatgaggacaaaggc i panTro5.chr6 C 0 C 0 s panPan2.chr6 171824296 70 + 173848474 cagtgtccttataaaagagaggcgg-ggattt--agacacccagagaagcggagggaatatgaggacaaaggc i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11507096 70 - 12463322 cagtgtccttataaaagagaggcag-ggattt--agacacccagagaagcggagggaatatgaggacaaaggc i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156336648 70 + 157873769 cagtgtccctataaaagagaggcag-ggattt--agacacccagagaagtggagggaatgtgaggacaaaggc i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170362949 70 + 172585720 cagtgtccttgtaaaagagaggcag-gcattt--agacacccagagaagtggagggaatgtgaggacaaaggc i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169108367 70 - 170955103 cagtgtccttataaaagagaggcag-gcattt--agacacccagagaagtggagggaatgtgaggacaaaggc i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8394534 70 + 10161646 cagtgtccttataaaagagaggcag-gcattt--agacacccagagaagtggagggaatgtgaggacaaaggc i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1426067 70 + 3144229 cagtgtccttgtaaaagagaggcag-gcattt--agacacccagagaagtggagggaatgtgaggacaaaggc i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96712464 69 + 98384682 cagtgtccttataaaagagaggcag-gca-tt--agacacccagagaagtggagggaatgtgaggacaaaggc i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8248216 70 - 10857215 cagtgtccttgtaaaagagaggcag-gcattt--agacacccagagaagtggagggaatgtgaggacaaaggc i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15637771 70 - 23502949 cagtgtccttataaaagagaggcag-gcattt--aggcacccagagaagtggagggaatgtgaggacaaaggc i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169920774 70 + 171630274 cagcgtccttataaaagagaggcag-gTGTCTGAAGACACCCGGGGAAGTGGAGGGGA--TGAGGACCAAGGC i calJac3.chr4 I 3 C 0 s saiBol1.JH378287 1322313 68 - 2905041 cagtgtctttataaaagagaggcag-ggattc--agacacccagagaagcggagggga--tgaggaccagggc i saiBol1.JH378287 I 3 C 0 s cebCap1.NW_016107695v1 1285237 68 - 2164891 cagtgtccttataaaagagaggcag-ggattc--agacacccagagaagcggagggga--tgaggaccaaggc i cebCap1.NW_016107695v1 I 3 C 0 s aotNan1.NW_018494782v1 1532542 68 - 1813869 cagcacccttataaaagagaggcag-ggattc--agacacccagagaagcggagtggg--tgaggaccaaggc i aotNan1.NW_018494782v1 I 14 C 0 s otoGar3.GL873575 10972233 25 - 12073884 ctgtgt------------------g-agctct--aaat---------------------------gcaaagac i otoGar3.GL873575 C 0 C 0 s dasNov3.JH569188 597921 71 + 760995 caggatctttataaaagagagacagagtgatt--tgacccacacgaaggccaatggaaagtgaagactgaggc i dasNov3.JH569188 C 0 I 36 e canFam3.chr1 56200016 101 + 122678785 I a score=233880.000000 s hg38.chr6_KB021644v2_alt 134550 27 + 185823 CATGTGCTGAGAAAAACCAGTGCGAGA s panTro5.chr6 173590842 27 + 175400573 CATGTGCTGAGAAAAACCAGTGCGAGA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171824366 27 + 173848474 CATGTGCTGAGAAAAACCAGTGCGAGA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11507166 27 - 12463322 CAGGTGCTGAGAAAAACCCGTGCGAGA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156336718 27 + 157873769 CATATGCTGAGAAAAACCCGTGCGAGA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170363019 27 + 172585720 CATGTGCTGAGAAAAGCCCACAGGAGA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169108437 27 - 170955103 CATGTGCTGAGAAAAGCCCACGCGAGA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8394604 27 + 10161646 catgtgctgagaaaagcccacgcgaga i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1426137 27 + 3144229 CATGTGCTGAGAAAAGCCCACAGGAGA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96712533 27 + 98384682 CATGTGCTGAGAAAAGCCCACGAGAGA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8248286 27 - 10857215 catgtgctgagaaaagcccacacgaga i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15637841 27 - 23502949 catgtgctgaggaaagcccacgcaaga i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169920844 27 + 171630274 AGTGTGCTGAGAAAAGCCAGTGTGAGA i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1322381 27 - 2905041 cacatgctgagaaaagccagtgtggga i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1285305 27 - 2164891 cgtgtgctgagaaaagccagtgtgaga i cebCap1.NW_016107695v1 C 0 I 30 s aotNan1.NW_018494782v1 1532610 27 - 1813869 cgtgtgctgagaaaagccagtgtgaga i aotNan1.NW_018494782v1 C 0 I 34 s otoGar3.GL873575 10972258 15 - 12073884 catgtccttaggaaa------------ i otoGar3.GL873575 C 0 C 0 e dasNov3.JH569188 597992 36 + 760995 I e canFam3.chr1 56200016 101 + 122678785 I a score=60182.000000 s hg38.chr6_KB021644v2_alt 134577 12 + 185823 ACGCTGGCTGCT s panTro5.chr6 173590869 12 + 175400573 ACGCTGGCTGCC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171824393 12 + 173848474 ACGCTGGCTGCC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11507193 12 - 12463322 ACGCTGGCTGCC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156336745 12 + 157873769 ATGCTGGCTGCT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170363046 12 + 172585720 ATGCTGGCAGCT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169108464 12 - 170955103 ATGCTGGCAGCT i macFas5.chr4 C 0 I 6 s macNem1.NW_012011000v1 8394631 12 + 10161646 atgctggcagct i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1426164 12 + 3144229 ATGCTGGCAGCT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96712560 12 + 98384682 ATGCTGGCAACT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8248313 12 - 10857215 atgctggcagct i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15637868 12 - 23502949 atgctggcagct i colAng1.NW_012114488v1 C 0 C 0 e otoGar3.GL873575 10972273 0 - 12073884 C e saiBol1.JH378287 1322408 0 - 2905041 C e aotNan1.NW_018494782v1 1532637 34 - 1813869 I e cebCap1.NW_016107695v1 1285332 30 - 2164891 I e calJac3.chr4 169920871 0 + 171630274 C e dasNov3.JH569188 597992 36 + 760995 I e canFam3.chr1 56200016 101 + 122678785 I a score=21276.000000 s hg38.chr6_KB021644v2_alt 134589 6 + 185823 GCAGGG s panTro5.chr6 173590881 6 + 175400573 GCAGGG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171824405 6 + 173848474 GCAGGG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11507205 6 - 12463322 GCAGGG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156336757 6 + 157873769 GCAGGG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170363058 6 + 172585720 GCAGGG i rheMac8.chr4 C 0 C 0 s chlSab2.chr13 96712572 6 + 98384682 GCAGGG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8248325 6 - 10857215 gcaggg i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15637880 6 - 23502949 gcaggg i colAng1.NW_012114488v1 C 0 C 0 e otoGar3.GL873575 10972273 0 - 12073884 C e saiBol1.JH378287 1322408 0 - 2905041 C e aotNan1.NW_018494782v1 1532637 34 - 1813869 I e cebCap1.NW_016107695v1 1285332 30 - 2164891 I e calJac3.chr4 169920871 0 + 171630274 C e dasNov3.JH569188 597992 36 + 760995 I e canFam3.chr1 56200016 101 + 122678785 I e cerAty1.NW_012002071v1 1426176 0 + 3144229 C e macNem1.NW_012011000v1 8394643 0 + 10161646 C e macFas5.chr4 169108476 6 - 170955103 I a score=-810.000000 s hg38.chr6_KB021644v2_alt 134595 18 + 185823 GTGAGAAGAGGAGGGAAG s panTro5.chr6 173590887 2 + 175400573 GT---------------- i panTro5.chr6 C 0 C 0 s panPan2.chr6 171824411 2 + 173848474 GT---------------- i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11507211 2 - 12463322 GT---------------- i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156336763 2 + 157873769 GT---------------- i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169108482 18 - 170955103 GTGAGAAGAGGAGGGAAG i macFas5.chr4 I 6 C 0 s chlSab2.chr13 96712578 8 + 98384682 GTGAGAAG---------- i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8248331 18 - 10857215 gtgagaagaggagggaag i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15637886 18 - 23502949 gtgagaagaggagggaag i colAng1.NW_012114488v1 C 0 C 0 e otoGar3.GL873575 10972273 0 - 12073884 C e saiBol1.JH378287 1322408 0 - 2905041 C e aotNan1.NW_018494782v1 1532637 34 - 1813869 I e cebCap1.NW_016107695v1 1285332 30 - 2164891 I e calJac3.chr4 169920871 0 + 171630274 C e dasNov3.JH569188 597992 36 + 760995 I e canFam3.chr1 56200016 101 + 122678785 I e cerAty1.NW_012002071v1 1426176 0 + 3144229 C e macNem1.NW_012011000v1 8394643 0 + 10161646 C e rheMac8.chr4 170363064 0 + 172585720 C a score=278.000000 s hg38.chr6_KB021644v2_alt 134613 3 + 185823 CAG s macFas5.chr4 169108500 2 - 170955103 -GG i macFas5.chr4 C 0 I 9 s manLeu1.NW_012106474v1 8248349 2 - 10857215 -gg i manLeu1.NW_012106474v1 C 0 I 45 e otoGar3.GL873575 10972273 0 - 12073884 C e saiBol1.JH378287 1322408 0 - 2905041 C e aotNan1.NW_018494782v1 1532637 34 - 1813869 I e cebCap1.NW_016107695v1 1285332 30 - 2164891 I e calJac3.chr4 169920871 0 + 171630274 C e dasNov3.JH569188 597992 36 + 760995 I e colAng1.NW_012114488v1 15637904 0 - 23502949 C e canFam3.chr1 56200016 101 + 122678785 I e chlSab2.chr13 96712586 0 + 98384682 C e cerAty1.NW_012002071v1 1426176 0 + 3144229 C e nomLeu3.chr3 156336765 0 + 157873769 C e macNem1.NW_012011000v1 8394643 0 + 10161646 C e rheMac8.chr4 170363064 0 + 172585720 C e gorGor5.CYUI01015032v1 11507213 0 - 12463322 C e panPan2.chr6 171824413 0 + 173848474 C e panTro5.chr6 173590889 0 + 175400573 C a score=11367.000000 s hg38.chr6_KB021644v2_alt 134616 21 + 185823 GGGCGAGAAGAGGAGGGAAGC s panTro5.chr6 173590889 17 + 175400573 ----GAGAAGAGGAGGGAAAC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171824413 17 + 173848474 ----GAGAAGAGGAGGGAAAC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11507213 17 - 12463322 ----GAGAAGAGGAGGGAAGC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156336765 12 + 157873769 ---------gaggagggaagc i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169108511 21 - 170955103 TGACCCCGGGGGGAGTGCGGC i macFas5.chr4 I 9 C 0 e otoGar3.GL873575 10972273 0 - 12073884 C e saiBol1.JH378287 1322408 0 - 2905041 C e aotNan1.NW_018494782v1 1532637 34 - 1813869 I e cebCap1.NW_016107695v1 1285332 30 - 2164891 I e calJac3.chr4 169920871 0 + 171630274 C e dasNov3.JH569188 597992 36 + 760995 I e colAng1.NW_012114488v1 15637904 0 - 23502949 C e canFam3.chr1 56200016 101 + 122678785 I e chlSab2.chr13 96712586 0 + 98384682 C e cerAty1.NW_012002071v1 1426176 0 + 3144229 C e manLeu1.NW_012106474v1 8248351 45 - 10857215 I e macNem1.NW_012011000v1 8394643 0 + 10161646 C e rheMac8.chr4 170363064 0 + 172585720 C a score=31328.000000 s hg38.chr6_KB021644v2_alt 134637 42 + 185823 AGGGGTGAGAAGAGGAGGGAAG----------------------------------------------TAGGGGTGAGAA---GAGGGAAG s panTro5.chr6 173590906 42 + 175400573 AGGGGTGAGAAGAGGAGGGAAG----------------------------------------------TAGGGGTGAGAA---GAGGGAAG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171824430 42 + 173848474 AGGGGTGAGAAGAGGAGGGAAG----------------------------------------------TAGGGGTGAGAA---GAGGGAAG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11507230 42 - 12463322 AGGGGTGAGAAGAGGAGGGAAG----------------------------------------------TAGGGGTGAGAA---GAGGGAAG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156336777 45 + 157873769 aggggtgagaagaggagggaag----------------------------------------------caggggtgagaagaggagggaag i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170363064 8 + 172585720 -------------------------------------------------------------------------GTGAGAA---G------- i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169108532 34 - 170955103 ------------------------------------------------------CCTGCTGGAAACCACAGGGGTGAGAA---GAGGAGGG i macFas5.chr4 C 0 I 3 s manLeu1.NW_012106474v1 8248396 88 - 10857215 aggggtgagaagaggagggaaggggctccctcctgacccctgggggagtgcggccctgctgGAAGCCACAGGGGTGAGAA---GAGGAGGG i manLeu1.NW_012106474v1 I 45 T 89 s otoGar3.GL873575 10972273 25 - 12073884 -------------gggggggag----------------------------------------------TGTGCGGATGGA---GATG---- i otoGar3.GL873575 C 0 C 0 e saiBol1.JH378287 1322408 0 - 2905041 C e aotNan1.NW_018494782v1 1532637 34 - 1813869 I e cebCap1.NW_016107695v1 1285332 30 - 2164891 I e calJac3.chr4 169920871 0 + 171630274 C e dasNov3.JH569188 597992 36 + 760995 I e colAng1.NW_012114488v1 15637904 0 - 23502949 C e canFam3.chr1 56200016 101 + 122678785 I e chlSab2.chr13 96712586 0 + 98384682 C e cerAty1.NW_012002071v1 1426176 0 + 3144229 C e macNem1.NW_012011000v1 8394643 0 + 10161646 C a score=3773.000000 s hg38.chr6_KB021644v2_alt 134679 2 + 185823 CA s panTro5.chr6 173590948 2 + 175400573 CA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171824472 2 + 173848474 CA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11507272 2 - 12463322 CA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156336822 2 + 157873769 ca i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169108569 2 - 170955103 CA i macFas5.chr4 I 3 T 92 s manLeu1.NW_012106474v1 8248395 2 - 10857215 ca i manLeu1.NW_012106474v1 T 89 C 0 s otoGar3.GL873575 10972298 2 - 12073884 GA i otoGar3.GL873575 C 0 C 0 e saiBol1.JH378287 1322408 0 - 2905041 C e aotNan1.NW_018494782v1 1532637 34 - 1813869 I e cebCap1.NW_016107695v1 1285332 30 - 2164891 I e calJac3.chr4 169920871 0 + 171630274 C e dasNov3.JH569188 597992 36 + 760995 I e colAng1.NW_012114488v1 15637904 0 - 23502949 C e canFam3.chr1 56200016 101 + 122678785 I e chlSab2.chr13 96712586 0 + 98384682 C e cerAty1.NW_012002071v1 1426176 0 + 3144229 C e macNem1.NW_012011000v1 8394643 0 + 10161646 C e rheMac8.chr4 170363072 0 + 172585720 C a score=89173.000000 s hg38.chr6_KB021644v2_alt 134681 85 + 185823 GGAGTGAGAAGAGGAGGGAAGGGGCTCT------------------------------------------------------------------------------------------CTCCTGACCCC-AGGGGAGTGCGGCCCTGCTGGCAGCC----------------------GCAAGGGTGAGAAGAGGAGG s panTro5.chr6 173590950 175 + 175400573 GGAGTGAGAAGAGGAGGGAAGGGGCTCTCTCCCAACCCCGGGGGACTGCGACTCTGCTGGCAGCCCCAGGGTGAGAAGAGGAAGGAAGCGGGGGTGAGAAGAGGAGGGAAGGGGCTCCCTCCTGACCCC-AGGGGAGTGCCGCCCTGCTGGCAGCC----------------------GCAAGGGTGAGAAGAGGAGG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171824474 3 + 173848474 GGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11507274 107 - 12463322 GGAGTGAGAAGAGGAGGGAAGGGGCTCT------------------------------------------------------------------------------------------CTCCCGACCCC-GGGGGACTGCGACCCTGCTGGCAGCCCCAGGGTGAGAAGAGGAAGGAAGCGGGGGTGAGAAGAGGAGG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156336824 82 + 157873769 ggggtgagaagaggaggGAAGGGGCTCT------------------------------------------------------------------------------------------CTCCCAACCCC-AGGGGAGTGCGGCCCTGCTGGCAGCC----------------------ACAGGGGTGAGAAGAGG--- i nomLeu3.chr3 C 0 I 266 s rheMac8.chr4 170363072 75 + 172585720 -----------AGGAGGGAAGGGGCTCC------------------------------------------------------------------------------------------CTCCTGACCCCTGGGGGAGTGCAGCCCTGCTGGAAGCC----------------------ACAGGGGTGAGAAGAGGAGG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169108479 86 - 170955103 GGGGTGAGAAGAGGAGGGAAGGGGCTCC------------------------------------------------------------------------------------------CTCCTGACCCCGGGGGGAGTGCGGCCCTGCTGGAAACC----------------------ACAGGGGTGAGAAGAGGAGG i macFas5.chr4 T 92 C 0 s chlSab2.chr13 96712586 75 + 98384682 -----------AGGAGGGAAGGCGCTCC------------------------------------------------------------------------------------------CTCCTGACCCAGGGGGGAGTGCAGCCCTGCTGGAAGCC----------------------ACAGGGGTGAGTAGAGGAGG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8248397 86 - 10857215 ggggtgagaagaggagggaaggggctcc------------------------------------------------------------------------------------------ctcctgacccctgggggagtgcggccctgctgGAAGCC----------------------ACAGGGGTGAGAAGAGGAGG i manLeu1.NW_012106474v1 C 0 C 0 s otoGar3.GL873575 10972300 29 - 12073884 ----------------------------------------------------------------------------------------------------------------------------ACACC------------------AAGAAAGCC----------------------AAGGGGCTGTGCGAG----- i otoGar3.GL873575 C 0 C 0 e saiBol1.JH378287 1322408 0 - 2905041 C e aotNan1.NW_018494782v1 1532637 34 - 1813869 I e cebCap1.NW_016107695v1 1285332 30 - 2164891 I e calJac3.chr4 169920871 0 + 171630274 C e dasNov3.JH569188 597992 36 + 760995 I e colAng1.NW_012114488v1 15637904 0 - 23502949 C e canFam3.chr1 56200016 101 + 122678785 I e cerAty1.NW_012002071v1 1426176 0 + 3144229 C e macNem1.NW_012011000v1 8394643 0 + 10161646 C a score=4464.000000 s hg38.chr6_KB021644v2_alt 134766 3 + 185823 GAA-- s panTro5.chr6 173591125 3 + 175400573 GAA-- i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11507381 3 - 12463322 GAA-- i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156337172 3 + 157873769 GAA-- i nomLeu3.chr3 I 266 C 0 s rheMac8.chr4 170363147 3 + 172585720 GAA-- i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169108565 3 - 170955103 GAA-- i macFas5.chr4 C 0 T 92 s chlSab2.chr13 96712661 3 + 98384682 GAA-- i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8248483 3 - 10857215 GAA-- i manLeu1.NW_012106474v1 C 0 C 0 s otoGar3.GL873575 10972329 3 - 12073884 --ACA i otoGar3.GL873575 C 0 C 0 e saiBol1.JH378287 1322408 0 - 2905041 C e aotNan1.NW_018494782v1 1532637 34 - 1813869 I e cebCap1.NW_016107695v1 1285332 30 - 2164891 I e calJac3.chr4 169920871 0 + 171630274 C e dasNov3.JH569188 597992 36 + 760995 I e colAng1.NW_012114488v1 15637904 0 - 23502949 C e canFam3.chr1 56200016 101 + 122678785 I e cerAty1.NW_012002071v1 1426176 0 + 3144229 C e macNem1.NW_012011000v1 8394643 0 + 10161646 C e panPan2.chr6 171824477 0 + 173848474 C a score=24275.000000 s hg38.chr6_KB021644v2_alt 134769 6 + 185823 GCAGGG s panTro5.chr6 173591128 6 + 175400573 GCGGGG i panTro5.chr6 C 0 I 150 s gorGor5.CYUI01015032v1 11507384 6 - 12463322 GTAGGG i gorGor5.CYUI01015032v1 C 0 I 43 s nomLeu3.chr3 156337175 6 + 157873769 GCAGCG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170363150 6 + 172585720 GCAGGG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169108476 6 - 170955103 GCAGGG i macFas5.chr4 T 92 C 0 s macNem1.NW_012011000v1 8394643 6 + 10161646 gcaggg i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1426176 6 + 3144229 GCAGGG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96712664 6 + 98384682 GCAGGG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8248486 6 - 10857215 GCAGGG i manLeu1.NW_012106474v1 C 0 C 0 s otoGar3.GL873575 10972332 6 - 12073884 TCAGGA i otoGar3.GL873575 C 0 C 0 e saiBol1.JH378287 1322408 0 - 2905041 C e aotNan1.NW_018494782v1 1532637 34 - 1813869 I e cebCap1.NW_016107695v1 1285332 30 - 2164891 I e calJac3.chr4 169920871 0 + 171630274 C e dasNov3.JH569188 597992 36 + 760995 I e colAng1.NW_012114488v1 15637904 0 - 23502949 C e canFam3.chr1 56200016 101 + 122678785 I e panPan2.chr6 171824477 0 + 173848474 C a score=5500.000000 s hg38.chr6_KB021644v2_alt 134775 1 + 185823 G s panTro5.chr6 173591284 1 + 175400573 G i panTro5.chr6 I 150 C 0 s panPan2.chr6 171824477 1 + 173848474 G i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11507433 1 - 12463322 G i gorGor5.CYUI01015032v1 I 43 C 0 s nomLeu3.chr3 156337181 1 + 157873769 G i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170363156 1 + 172585720 G i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169108482 1 - 170955103 G i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8394649 1 + 10161646 g i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1426182 1 + 3144229 G i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96712670 1 + 98384682 G i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8248492 1 - 10857215 G i manLeu1.NW_012106474v1 C 0 C 0 e otoGar3.GL873575 10972338 0 - 12073884 C e saiBol1.JH378287 1322408 0 - 2905041 C e aotNan1.NW_018494782v1 1532637 34 - 1813869 I e cebCap1.NW_016107695v1 1285332 30 - 2164891 I e calJac3.chr4 169920871 0 + 171630274 C e dasNov3.JH569188 597992 36 + 760995 I e colAng1.NW_012114488v1 15637904 0 - 23502949 C e canFam3.chr1 56200016 101 + 122678785 I a score=264749.000000 s hg38.chr6_KB021644v2_alt 134776 58 + 185823 TGAGAAGAGGAGGGAAGGGGCTCCCTCCTGACCCCAGGGGGAGTGCAGCCATGCTGGC s panTro5.chr6 173591285 58 + 175400573 TGAGAAGAGGAGGGAAGGGGCTCCCTCCTGACCCCAGGGGGAGTGCAGCCATGCTGGC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171824478 58 + 173848474 TGAGAAGAGGAGGGAAGGGGCTCCCTCCTGACCCCAGGGGGAGTGCAGCCATGCTGGC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11507434 57 - 12463322 TGAGAAGAGGAGGGAAGGGGCTCTCTCCTGACCCCA-GGGGAGTGCGGCCCTGCTGGC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156337182 58 + 157873769 Tgagaagaggaaggaataggctctctccccaccccagggggagtgcggccctgctggc i nomLeu3.chr3 C 0 T 180 s rheMac8.chr4 170363157 58 + 172585720 TGAGAAGAGGAAGGAAGGGGCTCCCTCCTGACCCCGGGGGGAGTGCAGCCCTGCTGGC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169108483 58 - 170955103 TGAGAAGAGGAGGGAAGGGGCTCCCTCCTGACCCCGGGGGGAGTGCGGCCCTGCTGGA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8394650 58 + 10161646 tgagaagaggagggaaggggctccctcctgaccccggggggagtgcggccctgctgga i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1426183 58 + 3144229 TGAGAAGAGGAGGGAAGGGGCTCCCTCCTGACCCCTGGGGGAGTGCCGCCCTGCTGGA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96712671 58 + 98384682 TGAGAAGAGGAAGGAAGGGGCTCCCTCCTGACCCCGGGGGGAGTGCAGCCCTGCTGGC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8248493 58 - 10857215 TGAGAAGAGGAAGGAAGGGGCTCCCTCCTGACCCCGGGGGGAGTGCCCCCCTGCTGGC i manLeu1.NW_012106474v1 C 0 C 0 s otoGar3.GL873575 10972338 35 - 12073884 ------GGGGGAGGAGGGGGGT--CTCCAGGCCCCTGGGACAG--------------- i otoGar3.GL873575 C 0 C 0 s dasNov3.JH569188 598028 19 + 760995 tgaggtgaagaggaaaggg--------------------------------------- i dasNov3.JH569188 I 36 C 0 e saiBol1.JH378287 1322408 0 - 2905041 C e aotNan1.NW_018494782v1 1532637 34 - 1813869 I e cebCap1.NW_016107695v1 1285332 30 - 2164891 I e calJac3.chr4 169920871 0 + 171630274 C e colAng1.NW_012114488v1 15637904 0 - 23502949 C e canFam3.chr1 56200016 101 + 122678785 I a score=130201.000000 s hg38.chr6_KB021644v2_alt 134834 44 + 185823 AGCCGCAGGA-----------------------GTGAGA-----------------------------------------------------AGAG---GGAAGCAGGGGTgagaagaggaag s panTro5.chr6 173591343 44 + 175400573 AGCCGCAGGA-----------------------GTGAGA-----------------------------------------------------AGAG---GGAAGCAGGGGTgagaagaggaag i panTro5.chr6 C 0 C 0 s panPan2.chr6 171824536 44 + 173848474 AGCCGCAGGA-----------------------GTGAGA-----------------------------------------------------AGAG---GGAAGCAGGGGTgagaagaggaag i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11507491 64 - 12463322 AGCCGCAGGAGTGAga---agagggaagcaggggtgaga-----------------------------------------------------agag---ggaagcagggGTgagaagaggaag i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156337060 46 + 157873769 AGCCCCAGG------------------------GTGAAA-----------------------------------------------------AGAGGAAGGAAGCAGGGGTGAGAAGAGGAGG i nomLeu3.chr3 T 180 C 0 s rheMac8.chr4 170363215 70 + 172585720 GGCCACAGGGGTGAGAAGAGGAGGGAAGCAGGGGTGAGA-----------------------------------------------------AGAGGAGGGAAGCAGGGGtaagaagaggagg i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169108541 47 - 170955103 AACCA-----------------------CAGGGGTGAGA-----------------------------------------------------AGAGGAGGGAAGCAGGGGTAAGAAGAGGAAG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8394708 47 + 10161646 aacca-----------------------caggggtgaga-----------------------------------------------------agaggagggaagcaggggtaagaagaggaag i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1426241 70 + 3144229 AGCCACAGGGGTGAGAAGAGGAGGGAAGCAGGGGTGAGA-----------------------------------------------------AGAGGAGGGAAGCAGGGGtaagaagaggcgg i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96712729 47 + 98384682 AGCCACAGGGGTGAGA----------------------------------------------------------------------------AGAGGAGGGAAGCAGCGGTAAGAAGAGGAAG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8248551 123 - 10857215 AGCCACAGGGGTGAGAAGAGGAGGGAAGCAGGGGTAAGAAGAGGCGGGAATGGGCTCTCTCCCGACCCTGGGGGTAGTGTGGCCATGCTGACAGAGGAGGGAAGCAGGGGtaagaagaggcgg i manLeu1.NW_012106474v1 C 0 C 0 e otoGar3.GL873575 10972373 0 - 12073884 C e saiBol1.JH378287 1322408 0 - 2905041 C e aotNan1.NW_018494782v1 1532637 34 - 1813869 I e cebCap1.NW_016107695v1 1285332 30 - 2164891 I e calJac3.chr4 169920871 0 + 171630274 C e dasNov3.JH569188 598047 0 + 760995 C e colAng1.NW_012114488v1 15637904 0 - 23502949 C e canFam3.chr1 56200016 101 + 122678785 I a score=23473.000000 s hg38.chr6_KB021644v2_alt 134878 4 + 185823 gaat s panTro5.chr6 173591387 4 + 175400573 gaat i panTro5.chr6 C 0 C 0 s panPan2.chr6 171824580 4 + 173848474 gaat i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11507555 4 - 12463322 gaat i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156337106 4 + 157873769 GAAG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170363285 4 + 172585720 gaat i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169108588 4 - 170955103 GAAT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8394755 4 + 10161646 gaat i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1426311 4 + 3144229 gaat i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96712776 4 + 98384682 GAAT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8248674 4 - 10857215 gaat i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169920871 4 + 171630274 GAAA i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1322408 4 - 2905041 gaaa i saiBol1.JH378287 C 0 C 0 s dasNov3.JH569188 598047 2 + 760995 --at i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10972373 0 - 12073884 C e aotNan1.NW_018494782v1 1532637 34 - 1813869 I e cebCap1.NW_016107695v1 1285332 30 - 2164891 I e colAng1.NW_012114488v1 15637904 0 - 23502949 C e canFam3.chr1 56200016 101 + 122678785 I a score=155681.000000 s hg38.chr6_KB021644v2_alt 134882 29 + 185823 agactctctccc---caccctg-gggggagtgc s panTro5.chr6 173591391 29 + 175400573 aggctctctccc---caccctg-gggggagtgc i panTro5.chr6 C 0 C 0 s panPan2.chr6 171824584 29 + 173848474 aggctctctccc---caccctg-gggggagtgc i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11507559 29 - 12463322 aggctctctccc---caccctg-gggggagtgc i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156337110 29 + 157873769 GGGCTCCCTCCT---GACCCCA-GGGGAAGTGT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170363289 29 + 172585720 gggctctctccc---gaccctg-ggggtagtgt i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169108592 29 - 170955103 GGGCTCTCTCCC---GACCCTG-GGGGTAGTGT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8394759 29 + 10161646 gggttctctccc---gaccctg-ggggtagtgt i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1426315 29 + 3144229 gggctctctccc---gaccctg-ggggtagtgt i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96712780 29 + 98384682 GGATTCCCTCCC---GACCCTG-GGGGTAGTGT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8248678 29 - 10857215 gggctctctccc---gaccctg-ggggtagtgt i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15637904 29 - 23502949 gggctccctcct---gaccccg-gggggagtgt i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169920875 25 + 171630274 GGGCTCTCTCCC---GACCCCC-GGGGTG---- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1322412 26 - 2905041 gggctctctccc---gacccccgggggtg---- i saiBol1.JH378287 C 0 C 0 s otoGar3.GL873575 10972373 4 - 12073884 -----------------------------GTGc i otoGar3.GL873575 C 0 C 0 s dasNov3.JH569188 598049 32 + 760995 ggattctttctcagagcctcat-gagggagcac i dasNov3.JH569188 C 0 C 0 e aotNan1.NW_018494782v1 1532637 34 - 1813869 I e cebCap1.NW_016107695v1 1285332 30 - 2164891 I e canFam3.chr1 56200016 101 + 122678785 I a score=89804.000000 s hg38.chr6_KB021644v2_alt 134911 12 + 185823 ggccctgctggc s panTro5.chr6 173591420 12 + 175400573 ggccctgctggc i panTro5.chr6 C 0 C 0 s panPan2.chr6 171824613 12 + 173848474 ggccctgctggc i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11507588 12 - 12463322 ggccctgctggc i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156337139 12 + 157873769 GGCCCTGCTGGC i nomLeu3.chr3 C 0 I 278 s rheMac8.chr4 170363318 12 + 172585720 ggccatgctgac i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169108621 12 - 170955103 GGCCATGCTGAc i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8394788 12 + 10161646 ggccatgctgac i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1426344 12 + 3144229 ggccatgctgac i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96712809 12 + 98384682 GGCCATGCTGAc i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8248707 12 - 10857215 ggccatgctgac i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15637933 12 - 23502949 ggccctgctggc i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169920900 11 + 171630274 GGccctg-tatc i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1322438 12 - 2905041 ggctctgctagc i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1285362 12 - 2164891 ggctctgctagc i cebCap1.NW_016107695v1 I 30 C 0 s otoGar3.GL873575 10972377 10 - 12073884 agccctgcct-- i otoGar3.GL873575 C 0 C 0 s dasNov3.JH569188 598081 12 + 760995 agacctaccaac i dasNov3.JH569188 C 0 C 0 e aotNan1.NW_018494782v1 1532637 34 - 1813869 I e canFam3.chr1 56200016 101 + 122678785 I a score=112768.000000 s hg38.chr6_KB021644v2_alt 134923 16 + 185823 tggcacctccgtccct s panTro5.chr6 173591432 16 + 175400573 tagcacctccatccct i panTro5.chr6 C 0 C 0 s panPan2.chr6 171824625 16 + 173848474 tagcacctccatccct i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11507600 16 - 12463322 tggcacctccgtccct i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170363330 16 + 172585720 tgacacctctgtccct i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169108633 16 - 170955103 tgacacctccgtccct i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8394800 16 + 10161646 tgacacctccgtccct i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1426356 16 + 3144229 tgacacctctgtccct i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96712821 16 + 98384682 tgacacctccgtccct i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8248719 16 - 10857215 tgacacctctgtccct i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15637945 16 - 23502949 tgacacctccgtccct i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169920911 16 + 171630274 tggcacctcgggcccc i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1322450 16 - 2905041 tggcacctcgggccct i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1285374 16 - 2164891 tggcacctcgggcccc i cebCap1.NW_016107695v1 C 0 C 0 s otoGar3.GL873575 10972387 13 - 12073884 ---cccctcagcctct i otoGar3.GL873575 C 0 C 0 s dasNov3.JH569188 598093 12 + 760995 ----acctggattttg i dasNov3.JH569188 C 0 C 0 e aotNan1.NW_018494782v1 1532637 34 - 1813869 I e canFam3.chr1 56200016 101 + 122678785 I e nomLeu3.chr3 156337151 278 + 157873769 I a score=895612.000000 s hg38.chr6_KB021644v2_alt 134939 101 + 185823 ggctttccccctccagaacgg--cgaggcaatggatttgtgttgtttaagccaataaagttg--tgtaatttgttcttggcaatactagaaattcatataCCAGC s panTro5.chr6 173591448 100 + 175400573 ggctttcccc-tccagaacgg--cgaggcaatggatttgtgttgtttaagccaataaagttg--tgtaatttgttcttggcaatactagaaaTTCACATACCAGC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171824641 100 + 173848474 ggctttcccc-tccagaacgg--cgaggcaatggatttgtgttgtttaagccaataaagttg--tgtaatttgttcttggcaatactagaaaTTCACATACCAGC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11507616 101 - 12463322 ggctttccccctccagaacgg--cgaggcaatggatttgtgttgtttaagccaataaagttg--tgtaatttgttcttggcaatactagaaattcatataCCAGC i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170363346 101 + 172585720 ggctttccccctccagaaccg--cgaggcaatgaatttgtgttgtttaagccaataaagttg--tgtaatttgttcttggcaatactagaaactcatataCCAGC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169108649 101 - 170955103 ggctttccccctccagaatgg--cgaggcaatggatttgtgttgtttaagccaataaagttg--tgtaatttgttcttggcaatactagaaactcatataCCAGC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8394816 101 + 10161646 ggctttccccctccagaatgg--cgaggcaatggatttgtgttgtttaagccaataaagttg--tgtaatttgttcttggcaatactagaaactcatataCCAGC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1426372 101 + 3144229 ggctttccccctccagaacgg--caaggcaatggatttgtgttgtttaagccaataaagttg--tgtaatttgttcttggcaatactagaaactcatataCCAGC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96712837 101 + 98384682 ggctttccccctccggaacgg--cgaggcaatggatttgtgttgtttaagccaataaagttg--tgtaatttgttcttggcaatactagaaactcatataCCAGC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8248735 101 - 10857215 ggctctccccctccagaacgg--caaggcaatggatttgtgttgtttaagccaataaagttg--tgtaatttgttcttggcaatactagaaactcatataCCAGC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15637961 101 - 23502949 ggctttccccctccagaacgg--cgaggcaacagatttgtgttgtttaagccaataaagttg--tgtaatttgttcttggcaatactagaaactcatataCCAGC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169920927 99 + 171630274 agctttccgcctccagggctg--cgaggcgagggatttgtgtggcttaagccaatagctttg--tgtaacttgttcttggcagcactagaaactc--atacCAGC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1322466 99 - 2905041 ggctttctacctctagaaccg--cggggcaagggatttgtgtggctgaagccaacggcatcg--tgtcacttgctcttggcagtaccagaaactc--atacCAGC i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1285390 99 - 2164891 agctttccgcctccagaactg--cgaggtgagggatttgtgtggcttaagccaatagcattg--tgtaacttgttcttggcagtgccagaaactc--atacCagc i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1532671 99 - 1813869 ggctttccgcctccagaactg--cgaggcgagggatttgtgtggcttaagccaacagcgttg--tgtaacttgttcttggcagtactaaaaactc--atacCAGC i aotNan1.NW_018494782v1 I 34 C 0 s otoGar3.GL873575 10972400 100 - 12073884 -gccttcagtttccagaactatctgaggcagtgaatttgtgttgtatcagccactaaaattg--tgtcatttgtta-tggcagcaccagaaaC-CAGAGATGAGC i otoGar3.GL873575 C 0 C 0 s dasNov3.JH569188 598105 101 + 760995 gacttggggtttccagaactc--tgaa--aatagatgtcttttgttttgggccaccaagttggtggtaatttgttacagaagttctaagaaactaatGTGCCAGG i dasNov3.JH569188 C 0 C 0 e canFam3.chr1 56200016 101 + 122678785 I e nomLeu3.chr3 156337151 278 + 157873769 I a score=780598.000000 s hg38.chr6_KB021644v2_alt 135040 71 + 185823 TACCAAGTAGGGCCTG-GAAGTCCTTATTTTAAGCCGGAACCCCAGGTGATCCTGGTTAGTGGATCACCGTT- s panTro5.chr6 173591548 71 + 175400573 TACCAAGTAGGGTCTG-GAAGTCCTTAGTTTAAGCCGGAACCCCAGGTGATCCTGGTTAGTGGATCACCGTT- i panTro5.chr6 C 0 C 0 s panPan2.chr6 171824741 71 + 173848474 TACCAAGTAGGGTCTG-AAAGTCCTTAGTTTAAGCCGGAACCCCAGGTGATCCTGGTTAGTGGATCACCgtt- i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11507717 71 - 12463322 TACCAAGTAGGGTCTG-GAAGTCCTTATTTTAAGCCGGAACCCCAGGTGATCCTGGTTAGTGGATCACCGTT- i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170363447 71 + 172585720 TACCAAgtagggtctg-aaagtccttattttaaactagaaccccaggtgatactggttagtggatcaccgtt- i rheMac8.chr4 C 0 I 1 s macFas5.chr4 169108750 71 - 170955103 TACCAAGTAGGGTCTG-GAAGTCCTTATTTTAAACCAGAACCCCAGGTGATACTGGTTAGTGGATCACCGTT- i macFas5.chr4 C 0 I 1 s macNem1.NW_012011000v1 8394917 71 + 10161646 TACCAAGTAGGGTCTG-GAAGTCCTTATTTTAAACCAGAACCCCAGGTGATACTGGTTAGTGGATCACCGTT- i macNem1.NW_012011000v1 C 0 I 1 s cerAty1.NW_012002071v1 1426473 71 + 3144229 TACCAAGTAGGGTCTG-GAAGTCCTTATTTTAAACCAGAACCCCAGGTAATACTGGTTAGTGGATCACCGTT- i cerAty1.NW_012002071v1 C 0 I 1 s chlSab2.chr13 96712938 71 + 98384682 TACCAAGTAGGGTCTG-GAAGTCCTTATTTTAAACCAGAACCCCAGGTGATACTGGTTAGTGGATCGCCGTT- i chlSab2.chr13 C 0 I 1 s manLeu1.NW_012106474v1 8248836 71 - 10857215 TACCAAGTAGGGTCTG-GAAGTCCTTATTTTAAACCAGAACCCCAGGTAATACTGGTTAGTGGATCACCGTT- i manLeu1.NW_012106474v1 C 0 I 1 s colAng1.NW_012114488v1 15638062 71 - 23502949 TACCAAGTAGGGTCTG-GAAGTCCTTATGTGAAACCAGAACCCCAGGTGATACTGGTTAGTGGATCACCGTT- i colAng1.NW_012114488v1 C 0 I 1 s calJac3.chr4 169921026 71 + 171630274 TACCAAgcaggatctg-gaagtctttattttcaaccagaaccccaggtgctcttggttagtggatcacggtt- i calJac3.chr4 C 0 I 1 s saiBol1.JH378287 1322565 71 - 2905041 TACAAAGTAGGATCTG-GAAGTCTTTACTTTAAACCAGAACCCCAGGTGATCTTGGTTAGTGGATCACGGTT- i saiBol1.JH378287 C 0 I 1 s cebCap1.NW_016107695v1 1285489 71 - 2164891 tatgaagtaggatctg-gaagtctttattttaaaccagaaccccaggtgatcttggttagtggatcacagtt- i cebCap1.NW_016107695v1 C 0 I 1 s aotNan1.NW_018494782v1 1532770 71 - 1813869 TACgaagtaggatctg-gaagtctttactttaaaccagaaccccaggtgatcttggttagtggatcacagtt- i aotNan1.NW_018494782v1 C 0 I 1 s otoGar3.GL873575 10972500 71 - 12073884 TATCAAGTGGGATCTG-GAGGTCTTCACCTGAAACCCAGACTGTAGGTGATCCTGGCCAGTGCCTCACACTT- i otoGar3.GL873575 C 0 I 1 s canFam3.chr1 56200117 71 + 122678785 TGCTGAGTAGGATCCG-GAAATCTTCATTTTAAACCAAAATACTAGGTGGTCCTGGTTTGTAGATCACATTT- i canFam3.chr1 I 101 C 0 s dasNov3.JH569188 598206 73 + 760995 TATCAAGTAGGATCTGAAAAATCTTCATTTTAAATTAAAACCCTAGATGATCCTGTGTAGTGGGCCACATTTT i dasNov3.JH569188 C 0 C 0 e nomLeu3.chr3 156337151 278 + 157873769 I a score=5573988.000000 s hg38.chr6_KB021644v2_alt 135111 519 + 185823 AAGAAACGCTGACCTAGGGCGATACTACATGACTGAGTTTTGAAGGGTATCAGAATTAAACATTTagtaggagagaaaaagcggctccagg--acttgggag-------------------gcccgagatgagacacagag--agaaacagtacttggctcctaggttgtttttgtctgactccagtcgcataattgcacattggaaaAACAGTCTGGAAATGACGGGATTTGCATCGTG-TTTTCAGTTCGTCAAGCGTCTTGACTCTGTCTGGATTTGTAACTAAACAATACCAGCAGGTGAGAGTGGTCACACGGAATGAATCACA-AACGATCTTCAAAGGACAAACGTGGTGAATCCTCGAACTGGCAAAGGAAGAAGTAAACTCTG-CCC-CCGC--AA--GCTCGCGCGACGCGACACCGCGG-CCTCTCCTTGGCCCACTCACCACTTGGACG--------CTCTTCTTCAGGCTGGGAACATGCGCTTCCTCACAGCTGGAGCCATTCCTTCCTCTTCTTCAAAG------GATTTTCTGAAATTCCAACCCC-ACT s panTro5.chr6 173591619 520 + 175400573 AAGAAACGCTGACCTAGGGCGATACTACATGACTGAGTTTTGAAGGGTATCAGAATTAAACATTTAGTAGGAGGGAAAAAGCGGCTCCAGG--ACTTGGGAG-------------------GCCCGAGATGAGGCacagag--agaaacagtacttggctcctaggttgtttctgtctGACTCCAGTCGCATAATTGCACATTGGAAAAACAGTCTGGAAATGACGGGATTTGCATCGTG-TTTTCAGTTCGTCAAGGGTTTTGACTCTGTCTGGATTTGTAACTAAACAATACCAGCAGGTGAGAGTGGTCACACGGAATGAATCACA-AACGATCTTCAAAGGACAAACGTGGTGAATCCTCGAACTGGCAAAGGAAGAAGTAAACTCTG-TCC-CCAC--GA--GCTCGCGCGACGTGACACCGCGG-CCTCTCCTTGGCCCACTCACCACTTGGACG--------CTCTTCTTCAGGCTGGGAACATGCGCTTCCTCACAGCTGGAGCCATTCCTTCCTCTTCTTCAAAG------GATTTTCTGAAATTCCAACCCCCACT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171824812 520 + 173848474 aagaaacgctgacctagggcgatactacatgactgagttttgaagggtatcagaattaaacatttagtaggagggaaaaagcggctccagg--acttgggag-------------------gcccgagatgaggcacagag--agaaacagtacttggctcctaggttgtttctgtctgactccagtcgcataattgcacattggaaaAACAGTCTGGAAATGACGGGATTTGCATCGTG-TTTTCAGTTCGTCAAGCGTCTTGACTCTGTCTGGATTTGTAACTAAACAATACCAGCAGGTGAGAGTGGTCACACGGAATGAATCACA-AACGATCTTCAAAGGACAAACGTGGTGAATCCTCGAACTGGCAAAGGAAGAAGTAAACTCTG-TCC-CCAC--GA--GCTCGCGCGACGTGACACCGCGG-CCTCTCCTTGGCCCACTCACCACTTGGATG--------CTCTTCTTCAGGCTGGGAACATGCGCTTCCTCACAGCTGGAGCCATTCCTTCCTCCTCTTCAAAG------GATTTTCTGAAATTCCAACCCCCACT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11507788 519 - 12463322 GAGAAACGCTGACCTAGGGCGATACCACATGACTGAGTTTTGAAGGGTATCAGAATTAAACATTTagtaggagagaaaaagcggctccagg--acttgggag-------------------gcccgagatgagacacagag--aggaacagtacttggctcctaggttgtttttgtctgactccagtcgcataattgcacattggaaaAACAGTCTGGAAATGACGGGATTTGCATCGTG-TTTTCAGTTCGTCAAGCGTCTTGACTCTGTCTGGA-TTGTAACTAAACAATACCAGCAGGTGAGAGTGGTCACACGGAATGAAACACA-AACGATCTTCAAAGGACAAACGTGGTGAATCCTCGAACTGGCAAAGGAAGAAGTAAACTCTG-CCC-CCAC--GA--GCTCGCGCGACGCGACACCGCGG-CCTCTCCTTGGCCCACTCACCACTGGGACG--------CTCTTCTTCAAGCTGGGAACATGCGCTTCCTCACAGCTGGAGCCATTCCTTCCTCTTCTTCAAAG------GATTTTCTGAAATTCCGACCCCCACT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156337429 520 + 157873769 AAGCAACGCTGACCTAGGGCGATACTACGTGACTGAGTTTCGAAGGGCATCAGAATTAAACATTTagtaggagagaaacagcggctccagg--acttgggag-------------------gcccaagatgagacacagag--agaaacagtacttggctcctaggttgtttttgtctGACTCCAGCCATATAATTGCACCTTGGAAAAACAGTCTGGAAATGACTGGATGTGCATCGTG-TTTTCAGTTCTTCAAGCGTTTTGACTCTGTCTGGATTTGTAACTAAACAATACCAGCAGGTGAAAGTGGTCACACGGAATGAAACACA-AACGATCTTCAAAGGACAAACGTGGTGAATCCTGGAACTGGCAAAGGAAGAAGTAAACTCTG-CGC-CCGC--CA--GCTCGCACGATGCGACACCGCAG-CCCCTCCTTGGCCCACTCGCCACTTGGACG--------CTCGCTTTCAAGCTGGGAACATGCGCTTCCTCACAGCTGGAGCCATTCCTTCCTCTTCTTCAAAG------GAGTTTCTGAAATTCCAACCCCCACT i nomLeu3.chr3 I 278 C 0 s rheMac8.chr4 170363519 520 + 172585720 aagaaacgctgACCTAGGGAGATACTACACGATTAAGTTTTGAAGGGCATCAGAATTAAACATTTAGGAGGAGAGAAAAAGAGGCTCCAGG--ACTTGCAAG-------------------GCCCAAGATGAGACACAGAG--AGAAACAGTACTTGGCTCCTAGGCTGTTTTTGTCTGACTCCAGCCACATAATTGCCCCTTGGAAAAACAGTCTGGAAATGACTGGGTTTGCATCGTG-TTTTCTGTTCTTCAAGCGTTTTGACTCTGTCTGGATTTGTAATTAAACAATACCAGCAGGTGAAAGCGGTCACACGGACTGAAACCCA-AACGATCTTCAAAGGACAAACGTGGTGAATCCTCGAACTGGCAAAGGAAGAAGTAAACTCTG-GCC-CCGC--AA--GCTCACGCGATGTGACACCGCGG-CCCCTCCTTGGCGCACTTGCCACTTGGACG--------CTCTTTTTCAAGCTGGGAACATGCGCTTCCTCACAGCTGGAGCCATTCCTTCCGCTTCTTCAAAG------GATTTTCTGAAATTCCAACCCCCACT i rheMac8.chr4 I 1 C 0 s macFas5.chr4 169108822 521 - 170955103 AAGAAATGCTGACCTAGGGAGATACTACACGATTAAGTTTTGAAGGGCATCAGAATTAAACATTTAGGAGGAGAGAAAAAGCAGCTCCAGG--ACTTGCGAG-------------------GCCCAAGATGAGACACAGAG--AGAAACAGTACTTGGCTCCTAGGCTGTTTTTGTCTGACTCCAGCCACATAATTGCCCCTTGGAAAAACAGTCTGGAAATGACTGGGTTTGCATCGTGTTTTTCTGTTCTTCAAGCGTTTTGACTCTGTCTGGATTTGTAACTAAACAATACCAGCAGGTGAAAGCGGTCACACGGACTGAAACCCA-AACGATCTTCAAAGGACAAACGTGGTGAATCCTCAAACTGGCAAAGGAAGAAGTAAACTCTG-GCC-CCGC--AA--GCTCACGCGACGTGACACCGCGG-CCCCTCCTTGGCCCACTTGCCACTTGGACG--------CTCTTTTTCAAGCTGGGAACATGCGCTTCCTCACAGCTGGAGCCATTCCTTCCGCTTCTTCAAAG------GATTTTCTGAAATTCCAACCCCCACT i macFas5.chr4 I 1 C 0 s macNem1.NW_012011000v1 8394989 521 + 10161646 AAGAAATGCTGACCTAGGGAGATATTACACGATTAAGTTTTGAAGGGCATCAGAATTAAACATTTAGGAGGAGAGAAAAAGCAGCTCCAGG--ACTTGCAAG-------------------GCCCAAGATGAGACACAGAG--AGAAACAGTACTTGGCTCCTAGGCTGTTTTTGTCTGACTCCAGCCACATAATTGCCCCTTGGAAAAACAGTCTGGAAATGACTGGGTTTGCATCGTGTTTTTCTGTTCTTCAAGCGTTTTGACTCTGTCTGGATTTGTAACTAAACAATACCAGCAGGTGAAAGCGGTCACACGGACTGAAACCCA-AACGATCTTCAAAGGACAAACGTGGTGAATCCTCAAACTGGCAAAGGAAGAAGTAAACTCTG-GCC-CCGC--AA--GCTCACGCGACGTGACACCGCGG-CCCCTCCTTGGCCCACTTGCCACTTGGACG--------CTCTTTTTCAAGCTGGGAACATGCGCTTCCTCACAGCTGGAGCCATTCCTTCCGCTTCTTCAAAG------GATTTTCTGAAATTCCAACCCCCACT i macNem1.NW_012011000v1 I 1 C 0 s cerAty1.NW_012002071v1 1426545 521 + 3144229 ACGAAACGCTGACCTAGGGAGATACTACACGATTAAGTTTTGAAGGGCATCAGAATTAAACATTTAGGAGGAGAGAAAAAGCAGCTCCAGG--ACTTGCGAG-------------------GCCCAAGATGAGACACAGAG--AGAAACAGTACTTGGCTCCTAGGCTGTTTTTGTCTGACTCCAGCCACATAATTGCCCCTTGGAAAAACAGTCTGGAAATGACTGGGTTTGCATCGTGTTTTTCTGTTCTTCAAGCGTTTTGACTCTGTCTGGATTTGTAACTAAACAATACCAGCAGGTGAAAGCGGTCACACGGACTGAAACCCA-AACGATCTTCAAAGGACAAACGTGGTGAATCCTCGAACTGGCAAAGGAAGAAGTAAACTCTG-GCC-CCGC--AA--GCTCACGCGACGTGACACCACGG-CCCCTCCTTGGCGCACTTGCCACTTGGACG--------CTCTTTTTCAAGCTGGGAACATGCGCTTCCTCACAGCTGGAGCCATTCCTTCCGCTTCTTCAAAG------GATTTTCTGAAATTCCAACCCCCACT i cerAty1.NW_012002071v1 I 1 C 0 s chlSab2.chr13 96713010 520 + 98384682 AGGAAACGCTGACCTAGGGAGATATTACACGATTAAGTTTTGAAGGGCATCAGAATTAAACATTTAGGAGGAGAGAAAAAGCAGCTCCAGG--ACTTGCGAG-------------------GCCCAAGATGAGACACAGAG--AGAAACAGTACTTGGCTCCTAGGCTGTTTTTGTCTGACTCCAGCCACATAATTGCACCTTGGAAAAACAGTCTGGAAATGACTGGGTTTGCATCGTG-TTTTCTGTTCTTCAAGCGTTTTGACTCTGTCTGGATTTGTAACTAAACAATACCAGCAGGTGAAAGCGGTCACACGGACTGAAACCCA-AACGATCTTCAAAGGACAAACGTGGTGAATCCTCGAACTGGCAAAGGAAGAAGTAAACTCTG-GCC-CCAC--AA--GCTCACGCGACGTGACACCGCGG-CCCCTCCTTGGCCCACTTGCCACTTGGACG--------CTCTTTTTCAAGCTGGGAACATGCGCTTCCTCACAGCTGGAGCCATTCCTTCCGCTTCTTCAAAG------GATTTTCTGAAATTCCAACCCCCACT i chlSab2.chr13 I 1 C 0 s manLeu1.NW_012106474v1 8248908 521 - 10857215 ATGAAACGCTGACCTAGGGAGATACTACACGATTAAGTTTTGAAGGGCATCAGAATTAAGCATTTAGGAGGAGAGAAAAAGCAGCTCCAGG--ACTTGCGAG-------------------GCCCAAGATGAGACACAGAG--AGAAACGGTACTTGGCTCCTAGGCTGTTTTTGTCTGACTCCAGCCACATAATTGCCCCTTGGAAAAACAGTCTGGAAATGACTGGGTTTGCATCGTGTTTTTCTGTTCTTCAAGCGTTTTGACTCTGTCTGGATTTGTAACTAAACAATACCAGCAGGTGAAAGCGGTCACACGGACTGAAACCCA-AACGATCTTCAAAGGACAAACGTGGTGAATCCTCGAACTGGCAAAGGAAGAAGTAAACTCTG-GCC-CCAC--AA--GCTCACGCGATGTGACACCACGG-CCCCTCCTTGGCGCACTTGCCACTTGGACG--------CTCTTTTTCAAGCTGGGAACATGCGCTTCCTCACAGCTGGAGCCATTCCTTCCGCTTCTTCAAAG------GATTTTCTGAAATTCCAACCCCCACT i manLeu1.NW_012106474v1 I 1 C 0 s colAng1.NW_012114488v1 15638134 516 - 23502949 AAGAAACGCTGACCTAGGGAGATACTACACGATTAAGTTTTGAAGGGCATCAGAATCAAACATTTAGGAGGAGAGAAAAAGCGGCTCCAGG--ACTTGGGAG-------------------GCCCAAGATGAGACAC------AGAAACAGGACTTGGCTCCTAGGCTGTTTTTGTCTGACTCCAGTCACGTAATTGCACCTTGGAAAAACAGTCTGGAAATGACTGGATTTGCATCGTG-TTTTCTGTTCTTCAAGCGTTTTGACTCTGTCTGGATTTGTAACTAAACAATACCAGCAGGTGAAAGTGGTCACACGGAATGAAACCCA-AACGATCTTCAAAGGACAAACGTGGTGAATCCTCGAACTGGCAAAGGATGAAGTGAACTCTG-CCC-CCGC--AA--GCTCACGCGACGTGACACCGCGG-CCCCTCCTTGGCCCACTTGCCACTTGGACG--------CTCTTTTTCAAGCTGGGAACATGCGCTTCTTCACAGCTGGAGCCATTCCTTCTGCTTCTTCAAAG------GATTTTCTGAAATTCCAACCCCCACT i colAng1.NW_012114488v1 I 1 C 0 s calJac3.chr4 169921098 500 + 171630274 gagaaacactgCCGTAAGGAGACACCACATTACTGGGTCTTGAAGGGCACCAGAAGCAGAGATTTAGTAGGAGAGAAAAAGCAGCTCCAGG--ACTTGGGAG-------------------G-CCGAGACGAGACACAGAT--AAAGACAGAACTTGGCT-CCAGGTTGTTTTCGTCTGACTGCAGCCACAGAGTTGCACCTTGG-AGAACAGTCTGGAAGCGACTGGATTTGCACCGCG-TTTCCAGTGCTTCAGGCGTCCTGACTCTGTCTGACTTTGTAACTAAACAATACCAGGGGGTGAAAGAGGTCACTTGGAATGAAAC-CA-GGCGGTCTTCAAAGGACGAGTGTGTTAAACCCTCGTACTGGCAAGGGAAGAAGGAAACCCAC-GCCACGCC--AA-------------------CCGCGGTCCCCTCCTTGGCCCACTCACCGCTTGGATG--------CCATTTGTCAAGCAGGGAACATGTTCTTCCTCACAGCTGGAGCCATTCCTGCCTCTTCTTTAAAG------GACTTTCTGAAATTCCAGCCCG-GCT i calJac3.chr4 I 1 C 0 s saiBol1.JH378287 1322637 512 - 2905041 AAGAAACGCTGATCTAGGGAGACAGCACATGACTGGGTCTTGAAGAGCATCAGAAGCAAAGATTTAGCAGGAGAGAAAAAGCAGCTCCAGG--ACTTGGGAG-------------------G-CGGAGACGAAGCACAGAG--AAAAACAGAACTTGGCTCCCAGGTTGTTTTCGTCTGGCTGCGGCCGCAGACTCGCACCTTGG-AAAACAGTCTGGAAGCAACTGGATTTGCATCGTG-TTTTCAGTTCTTCAAGCGTTCTGACTCTGTCTGAATTTGTAACTAAACAATACCAGCGGGTGAAAGAGGTCACTCGGAACGAAAC-CA-AG-GATCTTCAAAGGACGAGCGTGTTGGATCCTCGTCCTGGCAAAGGAAGAAGGAAACCCGC-GCC-CGCC--AG--GCTCGCTCCACGC----CCTGGGTCCCCTCCTCGGCCCGCTCACCACTTGGATG--------CCATTTGTCAAGCAGGGAACACGCGCTCCCTCACAGCTGGAGCCGTTCCTTCCTCTTCCTCAAAC------GACTTTCTGAAATTCCAACCCC-ACT i saiBol1.JH378287 I 1 I 230 s cebCap1.NW_016107695v1 1285561 514 - 2164891 aagaaacgctgACCTGGGGAGATACTACATT-CTGGGTCTTGAAGGGTATCAGAAGCAAAGATTTagtaggagggaaaaagcagctccggg--acttgggag-------------------g-ctgggatgaaacacagag--aaaaacagaacttggctcccaggttgttttcgtctGACTGCAACCACAGACTTGCACCTTGG-AAAACAGTCTGGAAGCGACTGGATTTGCATCGTG-TTTTCAGTTCGTCAAGCGTTCTGACTCTGTCTGAATTTGTAACTAAACAATACCAGCGGGTAAAAGAGGTCGCTCGGAACGAAAC-CA-AGCGATCTTCAAAGGACGGGCGTGTTGAATCCTCGTACTGGCAAAGGAAGAAGGAAATCTGC-GTC-CACC--AA--GCTCGTGCCACGCCA-ACTGCGGTCCCCTCCT-GGCCCACTCATCACTTGGACG--------CCATTTGTCAAGCAGGGAACATGCTCTTCCTCACAGCTGGAGCCATTCCTTCCTCTTCTTCAAAG------GACTTTCTGAAATTCCAACCCC-ACT i cebCap1.NW_016107695v1 I 1 C 0 s aotNan1.NW_018494782v1 1532842 512 - 1813869 gagaaacgctgACCGAGGGAGACACTACATTACTGGGTCTTGAAGGGCATCAGAAGCAAAGATTGAGTAGGAGAGAAAAAGCAGCTCCGGG--ACTTGGGAG-------------------G-CTGAGACGAAAC----AG--AAAAGCAGAACTTGGCTCCCGGGTTGTTTTCGTCTGACTGCAACCACAGAATTGCACCTCGG-AAAACAGTCTGGAAGCGACTGGATTTGCAGCGTG-TTTTCAGTTCTTCAAGCGTTCTGACTCCGTCTGAATTCGTAACTAAACAATACCAGCGGGTGAAAGGGGTCGCTCGGAACGAAAC-CA-AGCGATCTTCAAAGGACGAGCGTGTTGAATCCTTGTACTGGCAAAGGAAGAAGGAAATCCGC-GCC-CGCC--AA--GCTCGCGCCAGGCCA-ACCGCGGTCCCCTCCTCGGCCCCCTCACCACTTGGACA--------CCATTTGTCCAGCAGGGAACGTGCTCTTCCTCACAGCTGGAGCCATTCCTTCCTCTTCTTCAAAG------GACTTTCTGAAATTCCAACCCC-ACT i aotNan1.NW_018494782v1 I 1 C 0 s otoGar3.GL873575 10972572 517 - 12073884 AGGAAACTCTGGCCTGGGGAGGTTCTG-GTCACTGAGCCCT------------------ACATTTCAGATCAGAGGAGAAACAGGTTCTGG--TGCTGGGAGCCGAAGAGGAGCTGTGGGAGCCCAAGAGGAGCTGTGGGA--GGAAGCAGCATGTGGCTTCTGGGCTGTTGCTGTCCGACTGGCAGTGCAGCGTCCGGCCTTGG-GAGACAGTTCAG-AGTGATTTGATTTGTACCGTGTTACTCAATCCCTCCGGCCTCCAGACTCCATCTGAACTTGTCACTAACTGTTCCCAGCAGGTAAAAGTGGTCATGTTGAATGAAGCGCA-GATGGTCTTCAGGGGGCTAACGTGGCAGGTTCCTACACCGTCGAAGGAGGAAGGGAGACCTGTGCC-CAGC--AGAGGCTCACACTGCTCAGCACCG-GG-CCCCTCCTGGCCCCGCACACC---CAGA-G--------CTATTGGTAAACCCTGGAACAAGAGCGTCGTCGTGGCTGGGTGCATTCCTTTCTTTTCTTCAAAG------GATTTTTTGAAATTCCAACCGCCCAT i otoGar3.GL873575 I 1 C 0 s canFam3.chr1 56200188 510 + 122678785 GGGAAATTTGGACCCAGGATGATGCT--GTGATGGGAATTTGAGGAGCATCAGAATCACAGACTTAGAAGGGAAGAGTGTCCGGGTGCTGG------GGGAG-------------------GCACACAATGAGCCG-GGAG--AAAAAGAGTGTTTGGCTTCTGAGTTGTTTTCGTCTGGCTGCA-CCACATAATTGCACCTCAG-AAAACGGTCCAGAAGTGATTAGATTTGCATAATGTTTTTCAGCTCTTCAAGCTTTATGCCTCTGTCTCAGTTTGTAACTAAACATTCCCAGCAGGTGGAAATGCTC-CTTGGAACGAAACCCAGGATGATCTTCAGAAGGCTAACGTGGTGCATTCCTGTGCTGGCAAAGGAAGAAGGAAAAGCTG-CAC-GAGCTGAA--GTTCAGGCCACTGAGTCCCTTGG-TCCCTCACTGCCCACCATGACTCC---AAG--------CTCCTTTT-AAGCCTGGAACATGCTCTTTATCCCAGCTGGGTGCATTCCTTTCCTTTCTTCAAAG------GATTTCTTGGCATTCTAACCACCAAT i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 598279 540 + 760995 AAGACAAGCTGATCTAGAAAGATAGTGCATTCCTGAGTCTTGAAGGGCAGCAAAATTGTAGGTTTAGTAGGAAAGGAAGAGAAGTTTCAGACAGTCAGGGAG-------------------GCACAAGATGAAATGAAGTATTGAAAACAGTATTGGATTTTTAAGTTGTTTTTGTCTGATGGCAACCACATGATTGCATCCTGGAAAAACATTCTAAAAGTGATTTTATTTGCATAATGTGTTTCGGTTCTTCAGGCATTACGACTCTGCCTGAATTTGTAGCTAAACTTTACCAGCAGGTGAAAGTGGTCACACTGAATAAAACCCA-AATGATCTTCAAAAGGCTAAAGTGGTGAATTCTTACACTGGCAAAGGAAGAAGGAAAATCTG-ATT-AAGC--AA-AGTTCAAACGACTCAACACCGCAATCCCCTTCTTGGCCTACTCACAACTTTAATGTCTTCACATTATTCCTTCAGCCTGGAATGTAC-TTTCACCACTGATGGGGACATTCCTCTCCTTCCTTCAAAGGTTTTTGTTTTTTTGAAATTCCAACTGCCAAC i dasNov3.JH569188 C 0 C 0 a score=1039631.000000 s hg38.chr6_KB021644v2_alt 135630 128 + 185823 CTGAAAT--TGTTTAATAAA----CTATCACAGTTTCACCTTCTCAC---------------CC-TTCCACATGAGTAGCCTCTCTCCAGTAAGACTTGGCCCTAAAGGTGGGTGCTTT-GACCTGAGTGTCTACGCCAGGGCAGCGCCGG- s panTro5.chr6 173592139 117 + 175400573 CTGAAAT--TGTTTAATAAA----CTATCACAGTTTCACCTTCTCAC---------------CC-TTCCACATGAGTAGCCTCTCTCCAGTAAGACTTGGCCCTAAAGGTGGGTGCTTT-GACCTGAGTGTCTATGCC-----------GG- i panTro5.chr6 C 0 C 0 s panPan2.chr6 171825332 117 + 173848474 CTGAAAT--TGTTTAATAAA----CTATCACAGTTTCACCTTCTCAC---------------CC-TTCCACATGAGTAGCCTCTCTCCAGTAAGACTTGGCCCTAAAGGTGGGTGCTTT-GACCTGAGTGTCTATGCC-----------GG- i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11508307 117 - 12463322 CTGAAAT--TGTTTCATAAA----CTGTCACAGTTTCACCTTCTCAC---------------CC-TTCCACATGAGTAGCCTCTCTCCAGTAAGACTTGGCCCTAAAGGTGGGTGCTTT-GACCTGAGTGTCTACGCC-----------GG- i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156337949 131 + 157873769 CTGAAATTCTGTTTAATAAA----CTATCACAGTTTCACCTTCTCAC---------------CCTTTCCATATGAGTAGCCTCTCTCCAGTAAGACTTGTCCCTAAAGGTGGGTGCTTT-GACCTGAGTTTCTATGCCAGGGCAACGCCGG- i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170364039 127 + 172585720 CTGAAATTCTGTTTAATAAA----CTACCACAGTTTCACCTTCTCAC---------------CC-TTCCACATGAGTAGC--CTCTCCAGTAAGACTTGTCCCTAAAGTTGGGGGCTTT-GACCTGAGTTTCTACACCAGGGGAGCAC-TG- i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169109343 127 - 170955103 CTGAAATTCTGTTTAATAAA----CTACAATAGTTTCACCTTCTCAC---------------CC-TTCCACACGAGTAGC--CTCTCCAGTAAGACTTGTCCCTAAAGTTGGCGGCTTT-GACCTGAGTTTCTACGCCAGGGGAACAC-TG- i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8395510 127 + 10161646 CTGAAATTCTGTTTAATAAA----CTACAATAGTTTCACCTTCTCAC---------------CC-TTCCACACGAGTAGC--CTCTCCAGTAAGACTTGTCCCTAAAGTTGGCGGCTTT-GACCTGAGTTTCTACGCCAGGGGAACAC-TG- i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1427066 127 + 3144229 CTGAAATTCTGTTTAATAAA----CTGCAATAGTTTCACCTTCTCAC---------------CC-TTCCACATGAGTAGC--CTCTCCAGTAAGACTTGTCCCTAAAGTTGGCGGCTTT-GACCTGAATTTCTACGCCAGGGGAGCAC-TG- i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96713530 127 + 98384682 CTGAAATTCTGTTTAATAAA----CTACCACAGTTTCACCTTCTCAC---------------CC-TTCCACATGAGTAGC--CTCTCCAGTAAGACTTGTCCCTAAAGTTGGGGGCTTT-GACCTGAGTTTCTGCACCAGGGGAATAC-TG- i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8249429 127 - 10857215 CTGAAATTCTGTTTAATAAA----CTACCACAGTTTCACCTTCTCAC---------------CC-TTCCACATGAGTAGC--CTCTCCAGTAAGACTTGTCCCTAAAGTTGGTGGCTTT-GACCCGAGTTTCTACGCCAGGGGAACAC-TG- i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15638650 127 - 23502949 CTGAAATTCTGTTTAATAAA----CTACCACAGTTTCACCTTCTCGC---------------CC-TTCCACACGAGTAGC--CTCTCCAGTAAGACTTGTCCCTAAAGTTGGGGGCTTT-GACCTGAGTTTCTACACCAGGGGAGCAC-TG- i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169921598 127 + 171630274 CTGAAATTCTGCTTAATAAA----CTCTCACAGTTTCACCCTCTCCC---------------CC-TTCCACATAAGCAGC--TTCTCCTGTAAGGCTTGTCCCTAAAGGTGGGTGCTTT-CACCTGAGTTAAAACAACAGGGAAATGC-GG- i calJac3.chr4 C 0 I 1 s cebCap1.NW_016107695v1 1286075 127 - 2164891 CTGAAATTCTGCTTAATAAA----CTATCACAGTTTGACCCTCTCCC---------------CC-TTCCACGTAAGCAGC--TTCTCCCATAAGCCTTGTCCCTAAAGGTGGGTGCTTT-CACCTGAGTTAAAACACCAGGGAACCGC-GG- i cebCap1.NW_016107695v1 C 0 I 1 s aotNan1.NW_018494782v1 1533354 126 - 1813869 CTGAAGTTCTGCTTAATAAC----CTACCACAGTTTCACCCTCTCCC---------------CC-TTCCACATAAGC-GC--TTCTCCCGGAAGGCTTGTCCCTAGAGGTGGGTGCTTT-CACCTGAGTGAAAACGCCAGGGAAACGC-GG- i aotNan1.NW_018494782v1 C 0 I 21 s otoGar3.GL873575 10973089 141 - 12073884 CTGAAATCCTGTTTGATAAA----CT-TTACAATGTCATCTTCTCATAAAGTGTGCTGGTCATC-TTCCTCACCAACAGT--CTCTCCGGTGAGCCTTGTCCGTAAACGTCAGTGCCAT-GACCTATGCTGGCGTGCCCAGGAAAACC-AG- i otoGar3.GL873575 C 0 I 14 s canFam3.chr1 56200698 128 + 122678785 CTGAAATTCTGCTTCATAAAATATCTACCACAATCTCACCTTCTCA----------------TC-TTCCACATATATGGA--CCTGCAAACAGGACTCGTCCA-GAACGTATATGCTGG-GACCTTAA-GTAAATCCCAAAGCAAGCC-AG- i canFam3.chr1 C 0 I 1 s dasNov3.JH569188 598819 123 + 760995 CTGAAATTCT-TTTAATAAA----CTATCACAATTTCATCTTCTCAC---------------AC-TTCCACATAAACAGA---CCTGAAAATAGACTTGTTCATAAATGTAAATGCTGTAAACCCAAG----AAAACCAGGGTAAAAC-TAA i dasNov3.JH569188 C 0 C 0 e saiBol1.JH378287 1323149 230 - 2905041 I a score=45186.000000 s hg38.chr6_KB021644v2_alt 135758 6 + 185823 -GGGCAG s panTro5.chr6 173592256 6 + 175400573 -GGGCAG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171825449 6 + 173848474 -GGGCAG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11508424 6 - 12463322 -GGGCAG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156338080 6 + 157873769 -GGGCAG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170364166 6 + 172585720 -GGGCAG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169109470 6 - 170955103 -GGGCAG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8395637 6 + 10161646 -GGGCAG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1427193 6 + 3144229 -GGGCAG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96713657 6 + 98384682 -GGGCAG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8249556 6 - 10857215 -GGGCAG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15638777 6 - 23502949 -GGACAG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169921726 6 + 171630274 -GTGGGG i calJac3.chr4 I 1 I 17 s cebCap1.NW_016107695v1 1286203 6 - 2164891 -GGCCGG i cebCap1.NW_016107695v1 I 1 I 43 s otoGar3.GL873575 10973244 6 - 12073884 -GGGCAT i otoGar3.GL873575 I 14 C 0 s canFam3.chr1 56200827 6 + 122678785 -GAGCAG i canFam3.chr1 I 1 I 3 s dasNov3.JH569188 598942 6 + 760995 TGGAAA- i dasNov3.JH569188 C 0 C 0 e saiBol1.JH378287 1323149 230 - 2905041 I e aotNan1.NW_018494782v1 1533480 21 - 1813869 I a score=57460.000000 s hg38.chr6_KB021644v2_alt 135764 12 + 185823 ACAGAACCACCT s panTro5.chr6 173592262 12 + 175400573 ACAGAACCACCC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171825455 12 + 173848474 ACAGAACCACCC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11508430 12 - 12463322 AGAGAACCACCC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156338086 12 + 157873769 ACAGAACCACCT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170364172 12 + 172585720 ACAGGACCACCC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169109476 12 - 170955103 ACAGGACCACCC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8395643 12 + 10161646 ACAGGACCACCC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1427199 12 + 3144229 ATAGAACCACTC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96713663 12 + 98384682 ACAGAACCACCC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8249562 12 - 10857215 ACAGAACCACCC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15638783 12 - 23502949 ACAGAACCACCC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169921749 12 + 171630274 ACAGAACCCCGG i calJac3.chr4 I 17 C 0 s otoGar3.GL873575 10973250 3 - 12073884 GCG--------- i otoGar3.GL873575 C 0 I 2 s canFam3.chr1 56200836 10 + 122678785 ATGAAAACGT-- i canFam3.chr1 I 3 I 1 s dasNov3.JH569188 598948 12 + 760995 AGATGACCCCCA i dasNov3.JH569188 C 0 C 0 e saiBol1.JH378287 1323149 230 - 2905041 I e aotNan1.NW_018494782v1 1533480 21 - 1813869 I e cebCap1.NW_016107695v1 1286209 43 - 2164891 I a score=148636.000000 s hg38.chr6_KB021644v2_alt 135776 44 + 185823 ----------------GCCCTGAGCTCCCGGCTCACT------------------GG-TCT-CCATGCCTCGTTGGGGGC s panTro5.chr6 173592274 44 + 175400573 ----------------GCCCTGAGCTCCCTGTTCACT------------------GG-TCT-CCATGCCTCGTTGGGGGC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171825467 44 + 173848474 ----------------GCCCTGAGCTCCCTGTTCACT------------------GG-TCT-CCATGCCTCGTTGGGAGC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11508442 44 - 12463322 ----------------GCCCTGAGCTCCCGGCTCACT------------------GG-TCT-CCATGCCTCGTTGGGGGC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156338098 44 + 157873769 ----------------GCCCTGAGCTCCCTGCTCACT------------------GG-TCT-CCATGCCTCGTTGGGGGA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170364184 43 + 172585720 ----------------ACCCTAAGTGACCTGCTCACT-------------------G-TCT-TGATGCCTTGTTCGGGGC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169109488 43 - 170955103 ----------------ACCCTAAGTGACCTGCTCACT-------------------G-TCT-CGATGCCTCGTTGGGGGC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8395655 43 + 10161646 ----------------ACCCTAAGTGACCTGCTCACT-------------------G-TCT-CGATGCCTCGTTGGGGGC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1427211 43 + 3144229 ----------------GCCCTAAGTGACCTGCTCACT-------------------G-TCT-CGATGCCTCGTTGGGGGC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96713675 42 + 98384682 ----------------GCCC-AAGTGACCTGCTCACT-------------------G-TCT-CGATGCCTCGTTGGGGGC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8249574 43 - 10857215 ----------------ACCCTAAGTGACCTGCTCACT-------------------G-TCT-CGATGCCTCGTTGGGGGC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15638795 43 - 23502949 ----------------GCCCTAAGCAACCTGCTCACT-------------------G-TCT-CGATGCCTCGTTGGGGGC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169921761 22 + 171630274 ----------------GCCCTGTGTGCCCTGCCCACG-------------------G----------------------- i calJac3.chr4 C 0 C 0 s aotNan1.NW_018494782v1 1533501 23 - 1813869 ----------------GCCCTGTGCGCCCTGCCCACT-------------------GG---------------------- i aotNan1.NW_018494782v1 I 21 C 0 s otoGar3.GL873575 10973255 29 - 12073884 ----------------GCCCACAGGGCTCCAC---CT-------------------G-GCT-TTATGAC----------- i otoGar3.GL873575 I 2 C 0 s canFam3.chr1 56200847 62 + 122678785 ----------------ACCCCGGGTTTACGACAAACACAAAATGTTAAGGCTCTTGG-ATT-TGATGTGTCTATTTTGAC i canFam3.chr1 I 1 C 0 s dasNov3.JH569188 598960 60 + 760995 ATGTTTACTACAAACAAACCCAAATCCCTGGCTCATG-------------------G-TGTGTGATGCTCCTATATTGAC i dasNov3.JH569188 C 0 C 0 e saiBol1.JH378287 1323149 230 - 2905041 I e cebCap1.NW_016107695v1 1286209 43 - 2164891 I a score=58642.000000 s hg38.chr6_KB021644v2_alt 135820 11 + 185823 GAGACTGCGGA s panTro5.chr6 173592318 11 + 175400573 GAGACTGCGGA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171825511 11 + 173848474 GAGACTGCGGA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11508486 11 - 12463322 GAGACTGCGGA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156338142 11 + 157873769 GAGACTGGGGA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170364227 11 + 172585720 GAGACTGGTGA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169109531 11 - 170955103 GAGACTGGTGA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8395698 11 + 10161646 GAGACTGGTGA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1427254 11 + 3144229 GAGACTGGTGA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96713717 11 + 98384682 GAGACTGGTGA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8249617 11 - 10857215 GAGACTGGTGA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15638838 11 - 23502949 GAGACTGGTGA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169921783 11 + 171630274 GAGATGGAGGA i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1286252 11 - 2164891 GAGATGGAGGA i cebCap1.NW_016107695v1 I 43 C 0 s aotNan1.NW_018494782v1 1533524 9 - 1813869 -AGATGGAGA- i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10973284 9 - 12073884 AATGCTGGA-- i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56200909 8 + 122678785 ---ACTGCTGG i canFam3.chr1 C 0 I 3 s dasNov3.JH569188 599020 11 + 760995 AATTCTGGAGT i dasNov3.JH569188 C 0 C 0 e saiBol1.JH378287 1323149 230 - 2905041 I a score=214296.000000 s hg38.chr6_KB021644v2_alt 135831 23 + 185823 CTTTAATCTTCTATCTTTGAATT s panTro5.chr6 173592329 23 + 175400573 CTTTAATCTTCTATCTTTGAATT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171825522 23 + 173848474 CTTTAATCTTCTATCTTTGAATT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11508497 23 - 12463322 CTTTAATCTTCTATCTTTGAATT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156338153 23 + 157873769 CTTTAATCTTCTATCTTCGAATT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170364238 23 + 172585720 CTTTTATCTTCTATCTTCAAATT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169109542 23 - 170955103 CTTTAATCTTCTATCTTCAAATT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8395709 23 + 10161646 CTTTAATCTTCTATCTTCAAATT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1427265 23 + 3144229 CTTTAATCTTCTATCTTCAAATT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96713728 23 + 98384682 CTTTAATCTTCTATCTTCAAATT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8249628 23 - 10857215 CTTTAATATTCTATCTTCAAATT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15638849 23 - 23502949 CTTTAATCTTCTATCTTCAAATT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169921794 23 + 171630274 CTTTGATCTTCTGTCATAGACTT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1323379 23 - 2905041 CTTTCATCTTCTGTCTTAGACTT i saiBol1.JH378287 I 230 C 0 s cebCap1.NW_016107695v1 1286263 23 - 2164891 CTTTCACCTTCTACCTTGGACTT i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1533533 11 - 1813869 CTTTCATCTTC------------ i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10973293 20 - 12073884 ---CACTGGCCTACTTTAGAATT i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56200920 23 + 122678785 CTGCAATGTTCTATTCTAGAATT i canFam3.chr1 I 3 C 0 s dasNov3.JH569188 599031 23 + 760995 CTATAATATCCTATTTTAGAATT i dasNov3.JH569188 C 0 I 8914 a score=843991.000000 s hg38.chr6_KB021644v2_alt 135854 92 + 185823 TTCCCTGGATCCAAGCTGGGCTGCACTGCAATGCTCCTTGCC-CTCCTTCCTGAAACAGCTCATCTTTGTCCTGGAAAAATGTCATGCTTGAG s panTro5.chr6 173592352 92 + 175400573 TTCCCTGGATCCAAGCTGGACTGCACTGCAATGCTCCTTGCC-CTCCTTCCTGAAACAGCTCATCTTTGTCCTGGAAAAATGTCATGCTGGAG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171825545 92 + 173848474 TTCCCTGGATCCAAGCTGGACTGCACTGCAATGCTCCTTGCC-CTCCTTCCTGAAACAGCTCATCTTTGTCCTGGAAAAATGTCATGCTTGAG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11508520 92 - 12463322 TTCCCTGGATCCAAGCTGGACTGCACTGCAATGCTCCTTGCC-CTCCTTCCTGAAACAGCTCATCTTTGTCCTGGAAAAATGTCATGCTTGAG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156338176 92 + 157873769 TTCCTTGGATCCAAGCTGGACTGCATTGCAATGCTCCTTGCC-CTCCTTCCTGAAACAGCTCATCTTTGTCCTGTAAAAATGTCATGCTTGAG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170364261 92 + 172585720 TTCCCTGGATCCAAGCTGGACTGCATAGCAATGCTCCCTGCC-CTCCTTCCTGAAACAGCTCATCTTTGTCCTGGAAAAATGTCACACTTGAG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169109565 92 - 170955103 TTCCCTGGATCCAAGCTGGGCTGCATAGCAATGCTCCCTGCC-CTCCTTCCTGAAACAGCTCATCTTTGTCCTGGAAAAATGTCACGCTTGAG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8395732 92 + 10161646 TTCCCTGGATCCAAGCTGGACTGCATAGCAATGCTCCCTGCC-CTCCTTCCTGAAACAGCTCATCTTTGTCCTGGAAAAATGTCACGCTTGAG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1427288 92 + 3144229 TTCCCTGGATCCAAGCTGGACTGCATAGCAATGCTCTCTGCC-CTCCTTCCTGAAACAGCTCATTTTTGTCCTGGAAAAATGTCACACTTGAG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96713751 92 + 98384682 TTCCCTGGATCCAAGCTGGACTGCATAGCAATGCTCCCTGCC-CTCCTTCCTGAAACAGCTCATCTTTGTCCTGGAAAAATGTCATGCTTGAG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8249651 92 - 10857215 TTCCCTGGATCCAAGCTGGACTGCATAGCAATGCTCCCTGCC-CTCCTTCCTGAAACAGCTCATCTTTGTCCTGGAAAAATGTCATGCTTGAG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15638872 92 - 23502949 TTCCCTGGATCCAAGCTGGACTGCATAGCAATGCTCCCTGCC-CTTCTTCCTGAAACAGCTCATCTTTGTCCTGGAAAAATGTCATGCTTGAG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169921817 76 + 171630274 TTCCCTTGATACAAGCTGGACCACGCTGCGCT-------------GCTTCCTGAAGCAGGTCCCCTGTGGCCTGGAAAATC----TGCTCAAG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1323402 91 - 2905041 TTCCCCTGCTCCAAGCTGGACCGCGCTGCGCTGCCCCCTGCC-CGGCTCCCTGAAACAGGCCGCCTTTGGCCTGGAAAATT-TCGTGCTTGAG i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1286286 79 - 2164891 TTCCCTTGATCCAAGCTGGACTGTGCTGCTCC-------------GCTCCCTGAAACAGGTCGCCTTTGGCCTGGGAAATT-TGGTGCCTGAG i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1533544 89 - 1813869 --CCCTTGATCCAAGCTGGACCGCGCCGCGCTGCCCCCTGCC-CTGCTTCCAGAAGCAGGTCGCCTTTGGCCTGGAAAACC-TCGTGCTCGAG i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10973313 92 - 12073884 TTCCCTTCACCCAAACTGG-CTGTGTTGGAATTTGCCTTGCCACTGCTTCCCGAAATGTGTTGTCATTGGTTTGGATAAATGTAGTGTTTCAG i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56200943 93 + 122678785 TTCCCTTGACCTAAACAAGACTGTGTTGGAATTTGCCTTCCCATTGCTTCTTGAAATACGTCATCATTGGTTTGGAAAAATGTGGTGTTCCAG i canFam3.chr1 C 0 I 3277 e dasNov3.JH569188 599054 8914 + 760995 I a score=162944.000000 s hg38.chr6_KB021644v2_alt 135946 19 + 185823 GCACTTTGGCCCTTGGGAA s panTro5.chr6 173592444 19 + 175400573 GCACTTTGGCCCTTGGGAA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171825637 19 + 173848474 GCACTTTGGCCCTTGGGAA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11508612 19 - 12463322 GCACTTTGGCCCTTGGGAA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156338268 19 + 157873769 GCACTTTGGCCCTTGGGAA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170364353 19 + 172585720 GCACTTTGGCCTTTGGGAG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169109657 19 - 170955103 GCACTTTGGCCTTTGGGAG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8395824 19 + 10161646 GCACTTTGGCCTTTGGGAG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1427380 19 + 3144229 GCACTTTGGCCTTTGGGAG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96713843 19 + 98384682 GCACTTTGGCCTTTGGGAG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8249743 19 - 10857215 GCACTTTGGCCTTTGGGAG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15638964 19 - 23502949 GCACTTTGGCCTTTGGGAG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169921893 13 + 171630274 GCACTT------TTGGGAA i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1323493 13 - 2905041 GCACTT------TTGGGAA i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1286365 13 - 2164891 GCACTT------TTGGGAA i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1533633 13 - 1813869 GCGCTT------TGGGGAA i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10973405 19 - 12073884 GCACTCTGGCCCTTGGGAA i otoGar3.GL873575 C 0 I 2113 e dasNov3.JH569188 599054 8914 + 760995 I e canFam3.chr1 56201036 3277 + 122678785 I a score=1433648.000000 s hg38.chr6_KB021644v2_alt 135965 191 + 185823 GAACAAGAGGGAAGACG---GGAACCTCCTTTTTCTGGAGCTCCTACTGCG-ACTGGAC-CTTGCTGGCCGGTCAGTTTCACTCTCTGTTAAGCGCTGATCTGCTCC--------------------------------------GTCTGTGA-ACCCCTCGTGGATTTTATACATTGGAGAACAGTCTCCTGTTGCACTACTTCTCTTAATTTTCTTAACTCTGTCCTTCATTT s panTro5.chr6 173592463 228 + 175400573 GCACAAGAGGGAAGGCG---GGAACCTCCTTTTTCTGCAGCTCCTACTGCG-ACTGGAC-CTTGTTGGCCGGTCAGTCTCACTCTCTGTTAAGCGCTGATCTGCTCCCGGTCAGTCTCACTCTCTGTTAAGCGCTGATCTGCTCCGTCCGTGA-ACCCCTCGTGGATTTTATACATTGGAGAACAGTC-CCTGTTGCATTACTTCTCTTAATTTTCTTAACTCTGTCCTTCATTT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171825656 190 + 173848474 GAACAAGAGGGAAGACG---GGAACCTCCTTTTTCTGGAGCTCCTACTGCG-ACTGGAC-CTTGTTGGCCGGTCAGTCTCACTCTCTGTTAAGCGCTGATCTGCTCC--------------------------------------GTCCGTGA-ACCCCTCGTGGATTTTATACATTGGAGAACAGTC-CCTGTTGCATTACTTCTCTTAATTTTCTTAACTCTGTCCTTCATTT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11508631 191 - 12463322 GAACAAGAGGGAAGACG---GGAACCTCCTTTTTCTGGAGCTCCTACTGCG-ACTGGAC-CTTGTTGGCCGGTCAGTCTCACTCTCTGTTAAGCGCTGATCTGCTCC--------------------------------------GTCTGTGA-ACCCCTCGTGGATTTTATACATTGGAGAACAGTCTCCTGTTGCATTACTTctcttaattttcttaactctgtccttcattt i gorGor5.CYUI01015032v1 C 0 I 268 s nomLeu3.chr3 156338287 178 + 157873769 GAACAAGAGGGGAGACA---GGAACCTCCTTTTTCTGGAGATCCTACCGTG-ACTGGCA-CTTGTT------------TCACTCTCTGTTAAGCACCGATCTGCTCT--------------------------------------GTATGTGA-ACCCCTCGTGGATTTTATACATTGGAGAATAGTC-TCTGTTGCATTACTTCTCTTAATTTTCTTAACTTTGTCCTTCATTT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170364372 190 + 172585720 GAACAAGAGGGAAGACG---GGAACCTCCTTTTTCTGGAGCTCCTACTCTG-ACTAGGA-CTGGTTGGCCGGTCAGTTTCACTCTCTGTTAAGCACCGATCTGCTCC--------------------------------------GTA-GTGA-ACCCCTCGTGGATTTTATACACTGGAAAATGGTCTCTTGGTACATTACTTctcttaatgttcttaactttgtccttcactt i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169109676 190 - 170955103 GAACAAGAGGGAAGACG---GGAACCTCCTTTTTCTGGAGCTCCTACTCTG-ACTAGGA-CTGGTTGGCCGGTCAGTTTCACTCTCTGTTAAGCACGGATCTGCTCC--------------------------------------GTA-Gtga-acccctcgtggattttatacattggaaaatggtctcttggtacattacttctcttaatgttcttaactttgtccttcactt i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8395843 190 + 10161646 GAACAAGAGGGAAGATG---GGAACCTCCTTTTTCTGGAGCTCCTACTCTG-ACTAGGA-CTGGTTGGCCGGTCAGTTTCACTCTCTGTTAAGCACCGATCTGCTCC--------------------------------------GTA-GTGA-ACCCCTCGTGGATTTTATACATTGGAAAATGGTCTCTTGGTACATTACTTCTCTTAATGTTCTTAACTTTGTCCTTCACTT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1427399 190 + 3144229 GAACAAGAGGGAAGACA---GGCACCTCCTTTTTCTGGAGCTCCTACTCTG-ACTAGGA-CTGGTTGGCCGGTCAGTTTCACTCTCTGTTAAGCACCGATCTGCTCC--------------------------------------ATA-GTGA-ACCCCTCGTGGATTTtatacattggaaaatggtctcttggtacgttacttctcttaatgttcttaactttgtccttcactt i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96713862 190 + 98384682 GAACAAGAGGGAAGACA---GGAACCTCTTTTTTCTGGAGCTCCTTCCCTG-ACTAGGA-CTGGTTGGCCGGTCAGTTTCACTCTCTGTTAAGCACTGATCTGCTCT--------------------------------------GTA-GTGA-ACCCATCGTGGATTTTATACATTGGAAAATGGTCTCTTGATACATTATTTctcttgatgttcttaactttgtccttcactt i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8249762 190 - 10857215 GAACAAGAGGGAAGACA---GGCACCTCCTTTTTCTGGAGCTCCTACTCTG-ACTAGGA-CTGGTTGGCCGGTCAGTTTCACTCTTTGTTAAGCACCGATCTGCTCC--------------------------------------GTA-GTGA-ACCCCTCGTGGATTTtatacattggaaaatggtctcttggtacgttacttctcttaatgttcttaactttgtccttcactt i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15638983 190 - 23502949 AAACAAGAGGGAAGATG---GGAACCTCCTTTTTCTGGAGCTTCTACTCTA-ACTAGGA-CTGGTTGGCCGGTCAGTTTCACTCTCTGTTAAGCACCGATCTGCTCC--------------------------------------GTA-GTGA-ACCCCTCGTGGATTTCATACGTTGGAAAATGGTCTTTTGGTACATTACTTctcttaatgttcttaactttgtccttcactt i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169921906 186 + 171630274 GAACAAGCAGGAAGACG---GGAGCGTCCTCTTTCTTGAGCTCCTACCGTGCTCTGGGGACCCGTCGGCGGGT----TCCGCCCTGTGTTAGACACTGATCTGCTCC--------------------------------------CAC-GTGA-ACCCCTGGCTGAG--tattcattgcagaatggtctcctgctgcattacttctcttcattttcttaattttgttcttcattt i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1323506 187 - 2905041 GAACAAGCAGGAAGACG---GGAGTGCCCTCTCTCTGCAGCTCCTACTGGGCACCGGGA--CCGTCGGCGGGT---CTCGGCGCTCTGTTAGACGCTGATC-GCTCC--------------------------------------CAT-GTGAGACCCCTGGCTGAGTTTATTCATTCCAGAACAGTCTCCTGGTGCATTACTtctcttcattttcttacctttgttcttcattt i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1286378 194 - 2164891 GAACAGGCAGGCAGGAAGGTGGAGCGTCCTCTTTCTGGAGCTCCTGCCGTGCATCGGGA-CCCGTTGGCGGGTCAGCTCCGCTCTCTGTTAGACGCTGATCTGCTCC--------------------------------------CAG-GTGA-ACCCTTGGCTCAGTTTATTCATTGCAGAACAGCCTCCTGGTGCATTTCTTCCCCTCATTTTCTTAATTCTCTTCTTCATTT i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1533646 190 - 1813869 GAACGAGCAGGAAGAC----GGAGCGTCCTCTTTCTGGAGCTGCTACCGCGCGTCGGGA-CCCATTGGCGGGTCGGTTCTGCTCTCTGTTAGACGCTGCTCTGCGCC--------------------------------------CAT-GTGA-ACCCCTGGCTGGGTTTATTCATTGCAGAATAGTCTCCTGGTGCGTTACTTCTCCTCATCTTCTTAATTTTGTTCTTCATTT i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10973424 2113 - 12073884 I e dasNov3.JH569188 599054 8914 + 760995 I e canFam3.chr1 56201036 3277 + 122678785 I a score=1718730.000000 s hg38.chr6_KB021644v2_alt 136156 197 + 185823 AAAAGAAATCCTTAATtctgatgtatcaattatgttaacttttgttctttggcatattatttaaaaagtctttttatcccaaacttac--agatatccttacacgtcttcttataccatctttaacatttttacctttcacatttagggctttcatggatctggcattCACCAGGTGTCATGTGGT-GGAATCCAA--TTTA-- s panTro5.chr6 173592691 197 + 175400573 AAAAGAAATCCTTAATtctgatgtatcaattatgttaacttttgttctttggcatattatttaaaaagtctttttatcccaaacttac--agatatccttacacgtcttcttataccatctttaacatttttacctttcacatttagggctttcatggatctggcattcaccaggtgtcatgaggt-ggaatccaa--ttta-- i panTro5.chr6 C 0 C 0 s panPan2.chr6 171825846 197 + 173848474 AAAAGAAATCCTTAATTCTGATGTATCAATTATGTTAACTTTTGTTCTTTGGCATATTATTTAAAAAGTCTTTTTATCCTAAACTTAC--AGATATCCTTACACGTCTTCTTATACCATCTTTAACACTTTTACCTTTCACATTTAGTGCTTTCATGGATCTGGCATTCACCAGCTGTCATGAGGT-GGAATCCAA--TTTA-- i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11509090 197 - 12463322 aaaagaaatccttaattctgatgtatcaattatgttaacttttgttctttggcatattatttaaaaagtctttttatcccaaacttac--agatatccttacacgtcttcttataccatctttaacgtttttacctttcacatttagggctttcatggatctggCGTTCACCAGGTGTCATGAGGT-GGAATCCAA--TTTG-- i gorGor5.CYUI01015032v1 I 268 C 0 s nomLeu3.chr3 156338465 199 + 157873769 AAAAGAAATCCTTAATTTTGatgtatcaattattttaacttttgttctttggcatattatttaaaaagtctttttgtcccaaacttac--agatattcttacatgtcttcttataccatctttaacgtttttacctttcacatttagggctttcatggatctggtattcaccaggtgtcatgaggt-gggaatcca--cttaat i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170364562 199 + 172585720 aaaagaaatccttaattttgaggtatcgattattttaacttttgttctttggcatatgattttaaaagtctttttatcgcaaacttac--agatattcttatacgtcttcttatatcatctttaacgtttttacctttcacatttaaggctttcatggacctggcattcatcaagtgttatgaggtgggaatccaa-ttttt-- i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169109866 197 - 170955103 aaaagaaatccttaattttgaggtatcgattattttaacgtttgttctttggcatatgattttaaaagtctttttatcccaaacttac--agatattcttatacatcttcttatatcatctttaacgtttttacctttcacatttagggctttcatggacct-gcattcaccaagtgttatgaagtgggaatccaa--tttt-- i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8396033 198 + 10161646 AAAAGAAATCCTTAATTTTGAGGTATCGATTATTTTAACGTTTGTTCTTTGGCATATGATTTTAAAAGTCTTTTTATCCCAAACTTAC--AGATATTCTTATGCATCTTCTTATATCATCTTTAACGTTTTTACCTTTCACATTTAGGGCTTTCATGGACCT-GCATTCACCAAGTGTTATGAAGTGGGAATCCAA-TTTTT-- i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1427589 200 + 3144229 aaaagaaatccttaattttgaggtatcgattattttaacttttgttctttggcatatgattttaaaagtctttttatcccaaacttac--agatattcttatacgtcttcttatatcatctttaacgtttttacctttcacatttagggctttcatggacctggcattcaccaagtgttatgaagtgggaatccaatttttt-- i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96714052 199 + 98384682 aaaagaaatccttaattttgaggtatcgattattttaacttttgttctttggcatatgattttaaaagtctttttatcccaaacttac--agatattcttatacgtcttcttataccatctctaacgttttcacctttcacatttagggctttcatggacctggcattcaccaagtgttatgaggtgggaatccaa-ttttt-- i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8249952 199 - 10857215 aaaagaaatccttaattttgaggtatcgattattttaacttttgttctttggcatatgatttgaaaagtctttttatcccaaacttac--agatattcttatacgtcttcttatatcatctttaacgtttttacctttcacatttagggctttcatggacctggcattcaccaagtgttatgaagtgggaatccaa-ttttt-- i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15639173 198 - 23502949 aaaagaaatccttaattttgaggtatcgattattttaactttcgttctttggcacatgattttaaaagtctttttatcccaaacttac--agatattcgtatacgtcttcttatatcatctttaacgtttttacctttcacatttagggctttcatggatctggcattCACCAAGTGTTACGAGGTGGGAATCTGA--TTTT-- i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169922092 183 + 171630274 aaaagaaatccttacttttgatgtatcgattattttaacttttgttcttgggcatattattttaaaagtcattttatcccaaatctacaaagatagtcttagacgtcttcttataccctctttcacatttttacctttcatatttag---------------gGCACTCACCAGGTGTCATGAGGTGAGAATCCA----CTA-- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1323693 200 - 2905041 aaaagaaatccttacttttaatgtatcaattattttaacttttgttcttgggcatattattttaaaactcgttttatcccagtcttacaaagatagtcttatacgtcttcttataccctctttaacatttttacctttcatatttagggctttccttgatctggcgctccccaggtgtcatgaggtgggaatccaa--ttta-- i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1286572 198 - 2164891 AAAAGACATCCTGACTTTTGATGTATCAATGATTTTAACTTTTGTTCTTGGGCATATTATTTT--AAGTCATTTTATCCCAAACTTACAAAGATAGTCTTATACGTCTTCTTATTCTCTCTTTAACATTTTTACCTTTTATATTTAGGGCTTTCCTTGATCTGGCGCTCACCAGGTGTCATGAGGTGGGAATCCAA--TTTA-- i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1533836 200 - 1813869 AAAAGAAATCCTTACTTTTGATGTATCAATCACTTTAACTTTTGTTCTTGGGCATATTATTTTCAAAGTCATTTTATCCCAGACTTACAAAGATAGTCTTACGCGTCTTGTTACACCCTATCTCACATTTTTACCTTTCATATTGAGGGCTTCCCTTGATCTGGCGCTCACCAGGTGTCATGAGGTGGGAATCCAA--TTTA-- i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10973424 2113 - 12073884 I e dasNov3.JH569188 599054 8914 + 760995 I e canFam3.chr1 56201036 3277 + 122678785 I a score=2454975.000000 s hg38.chr6_KB021644v2_alt 136353 278 + 185823 TTTTTT---ACGTTCTAGGATTCAGCCAccttcaatctccctaaccgtttctaatagttttgacatttgttccttaccaa-tcaacctccttctcagcgatctga-------cgtctccaggactgaacttggaggaacttccctgtaacctgtgttagtttgctgtcttgttggaggctagacgcTAATAA-TACCTGGGCTCATGTTTTTTGAGGGTGTCA---TTCTTTCTTTTTCTCTTGATGTTTT------AAGCCTTTTGTAGAACTCAGGATTCCCAGCAC------------------------------------------------------------------TAAACCTCAC s panTro5.chr6 173592888 278 + 175400573 tttttt---ACGTTCTAGGATTCAGCCAccttcaatctccctaaccgtttctaatagttttgacatttgttccttaccga-tcaacctccttctcagcgatctga-------cgtctccaggactgaacttggaggaacttccctgtaacctgtgttagtttgctatcttgttggaggctagatgcTAATAA-TACCTGGGCTCATGTTTTTTGAGGGTGTCA---TTCTTTCTTTTTCTCTTGATGTTTT------AAGCCTTTTGTAGAACTCAGGATTCCCAGCAC------------------------------------------------------------------TAAACCTCAC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171826043 278 + 173848474 TTTTTT---ACGTTCTAGGATTCAGCCAccttcaatctccctaaccgtttctaatagttttgacatttgttccttaccaa-tcaacctccttctcagcgatctga-------cgtctccaggactgaacttggaggaacttccctgtaacctgtgttagtttgctatcttgTTGGAGGCTAGATGCTAATAA-TACCTGGGCTCATGTTTTTTGAGGGTGTCA---TTCTTTCTTTTTCTCTTGATGTTTT------AAGCCTTTTGTAGAACTCAGGATTCCCAGCAC------------------------------------------------------------------TAAACCTCAC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11509287 278 - 12463322 TTTTTT---ATGTTCTAGGATTCAGCCAccttcaatctccctaaccgtttctaatagttttgacatttgttccgtaccaa-tcaacctccttctcagcgatctga-------cgtctccaggactgaacttggaggaacttccctataacctgtgttagtttgctatcttgttggaggctagacgcTAATAA-TACCTGGGCTCATGTTTTTTGAGGGTGTCG---TTCTTTCTTTTTCTCTTGATGTTTT------AAGCCTTTTGTAGAACTCAGGATTCCCAGCAC------------------------------------------------------------------TAAACCTCAC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156338664 266 + 157873769 tttttt---ATGTTCTAGGATTCAGCCAccttcagtctccctaaccgtttctaatagttttgacatttgttccttaccaa-tcaacctccttctcagcgatctga-------catctccgggactgaacttggaggaacttccctgtaacctgtgttagtttgctatcttgTTGGAGGCTAGACGTTAATAA-TTCCTGGGCTCATATTTTTTGAGGGTGTCG---TTCTTTCTTTTTCTCTTCATGTTTT------AAGCCATCTGTA-AACCCAGGATTCCGAGCA----------------------------------------------------------------------------- i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170364761 278 + 172585720 tttttt---acatTCTAGGATTCAGCCAccttcaatctccctaacagtttctaatagttttgacatttgttccttaccaa-tcaacctccttctcagcgatctga-------cgtctccaggactgaacttggaggaatttccctgtaacctgtgttagtttgctatcctgttggaggctggaCGTTAATAA-TACCTGGGCTCATATTTTTTGACGGTGTCA---TTCTTTCTTTTTCTCTTGATGTTTT------AAGCCTTTTGTAGAACTCAGGATTCCCAGCAC------------------------------------------------------------------CAAACCTCAC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169110063 278 - 170955103 tttttt---acatTCTAGgtttcagccaccttcaatttccctaaccgtttctaatagttttgacatttgttccttaccaa-tcaacctccttctcagcgatctga-------cgtctccaggactgaacttggaggaatttccctgtaacctgtgtaaatttgctatcctgttggaggctggaCGTTAATAA-TACCTGGACTCATATTTTTTGACGGTGTCA---TTCTTTCTTTTTCTCTTGATGTTTT------AAGCCTTTTGTAGAACTCAGGATTCCCAGCAC------------------------------------------------------------------CAAACCTCAC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8396231 278 + 10161646 TTTTTT---ACATTCTAGgtttcagccaccttcaatttccctaaccgtttctaatagttttgacatttgttccttaccaa-tcaacctccttctcagcgatctga-------cgtctccaggactgaacttggaggaatttccctgtaacctgtgttaatttgctatcctgttggaggctggaCGTTAATAA-TACCTGGGCTCATATTTTTTTACGGTGTCA---TTCTTTATTTTTCTCTTGATGTTTT------AAGCCTTTTGTAGAACTCAGGATTCCCAGCAC------------------------------------------------------------------CAAACCTCAC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1427789 278 + 3144229 tttttt---acatTCTAGgtttcagccaccttcaatttccctaaccgtttctaatagctttgacatttgttccttaccaa-tcaacctccttctcagcgatctga-------cgtctccaggactgaacttggagcaacttccctgtaacctgtgttagtttgctatcctgTTGGAGGCTAGACGTTAATAA-CACCTGGGCTCCTATTTTTTGACAGGGTCA---TTCTTTCTTTTTCTCTTGATATTTT------AAGCCTTTTGTAGAACTCAGGATTCCCAGCAT------------------------------------------------------------------GAAACCTCAC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96714251 278 + 98384682 tttttt---accTTCTAGGATTCAGCCAccttcaatctccctgaccgtttctaatagttttgacctttgttccttaacaa-tcaacctccttctcagcgatctga-------cgtctccaggactgaacttggaggaacttccctgtaacctgtggtagtttgctatcctgTTGGAGGCTAGACGTTAATAA-TACCTGGGCTCATATTTTTTGACGGTGTCA---TTCTTTCTTTTACTCTTGATATTTT------AAGCCTTTTGTAGAACTGAGGATTCCCAGCAC------------------------------------------------------------------CAAACCTCAC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8250151 278 - 10857215 tttttt---acatTCTAGgtttcagccaccttcaatttccctaaccgtttctaatagttttgatatttgttccttaccaa-tcaacctccttctcagcgatctga-------cgtctccaggactgaacttggaggaacttccctgtaacctgtgttagtttgctatcctgTTGGACGCTAGACGTTAATAA-CACCTGGGCTCCTATTTTTTGACAGGGTCA---TTCTTTCTTTTTCTCTTGATATTTT------AAGCCTTTTGTAGAACTCAGGATTCCCAGCAC------------------------------------------------------------------GAAACCTCAC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15639371 278 - 23502949 TTTTTT---ACGTTCTAGGATTCAGCCAccttcaatctccctaaccgtttctaatagttttgacatttgttccttaccaa-tcaacctccttctcagcgatctga-------cgtctccaggactgaacttggaggcacttccctgtaacctgtgttagtttgctatcttgTTGGAGGCTAGACGTTAATAA-TACCTGGGCTCATATTTTTTGACGCTGTCA---TTCTTTCTTTTTCTATTAATGTTTT------AAGCCTTTTGTAGAACTCAGGATTCCCAGCAC------------------------------------------------------------------CAGACCTCAC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169922275 272 + 171630274 TTTTTTT--ATGTTCTAGGATTCGGCCACCTGCAATCTCCCTAACCGT----------TTGGACATTTGCTCCTTCCCTA-TCAA---CCTCCCCAGCAATCTGAGAAGTTCAGTCTTCAGGACTGAACCTGGAGGAAGGG-CCTGTAACCTGTGTAA-CTTGCTGTCTTGCTGGAGGCCAGAAGCTAATAAGCGTCTGAGCTGATATTTTTTGATGATGTCA---TTCTTTTCTTTTCTCTTGATGCTTT------AAGCCTTTGTTAGAACCATGGCTTCCTAGCAC------------------------------------------------------------------CAAACGTCGC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1323893 266 - 2905041 cttttttacacgtTCTAGGATTCGGCCGCCCGCAATCTCCCTAACCGT----------TTTGACATTTGTTCCTTACCAA-TCAA---CCTTCTCAGCGATCTGA-------CGTCTTCAGGCCTGAACCTGGAGGAAGTG-CCTGTAACCTGTGTAA-CTGGCTGTCTTGCTGGAGGCTAGAAGTTAATAA-CACCTGAGCTGATGTTTTCTGATGGTGTCA---TTCTTTTCTTTTCTCTTAATGCTTT------AAGCCTTGATTAGAACCACGGCTTCCTAGCAC------------------------------------------------------------------CAAACATCGC i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1286770 263 - 2164891 TTTTTT---ACGTTCTAGGATTGAGCCACCTGCAATCTCCCTAACTGT----------TTTGACATTTGTTACTTACCAA-TCAA---CCTTCTCAGCGATCTGA-------CGTCTTCAGGACTGGACCTGGAGGAAGTG-CCTGATACCTGTGTGA-CTTGCTGTCTTGCTGGAGGCTAGAAGTTAATAA-TACCTGAGCTGATATTTTTTGATGGTGTCA---TTCTTTTCTTTTCTGTTGATGCTTT------AAGCTTTTATTAGAACTATGGCTTCCTAGCAC------------------------------------------------------------------CAAAAGTCTC i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1534036 256 - 1813869 TTTTCTT--ACGTTCTAGGATTCAGCCACCTGCAATCTCCCTAACCGT----------TTTGACATTTGTTCCTTACCAA-TCAA---CCTTCTCAGCCATC----------TGTCTTCAGGACTGAACCTGGAGG-AGTG-CCTGTAACCTGCGCAA--TTGCTGTCTTGCTGGAGGCTACAAGTTAA----TACCTGAGCTGATATTTTTTGATGGTGTCA---TTCTTTTCTTTTCTCTTGAGGCTTT------AAGCCTTTATTAGAATTATGGCTTCCTAGCAC------------------------------------------------------------------CAAATGTCCC i aotNan1.NW_018494782v1 C 0 C 0 s canFam3.chr1 56204313 340 + 122678785 TTCCTT---ATGTCCTGGGATCTAGCC-TCTCCAGTGGCCCCAG--GCTTCTCGTAGCTCTCACACCTGCCTCTTTCCTGCTCTATGTCCATCTCTGCAGTATCT-------CG------GGGCTATGTTTAGGGGGAC---CCAGCAACTAGTGTGAGTTTGCTATTGTGTTGGGAGCTGGGAGGTAATAA-TATCTGGGTGCATATTTTTTGATA--GTCAATTTTCCTTCTTTTTCTCTTGATATTCTTCCTAAGGGTCTACTGTAGAATTTAGGATTCCTggaacacctgagtggctcaggtggttaagcatctatctttggttcaggtcatgatctcagggtcctgggatcgagcctcac i canFam3.chr1 I 3277 I 145 e otoGar3.GL873575 10973424 2113 - 12073884 I e dasNov3.JH569188 599054 8914 + 760995 I a score=826437.000000 s hg38.chr6_KB021644v2_alt 136631 90 + 185823 CTG----TGATGATTGAAAGTGATAAGATCCTTCAGTACCTCTATCCAGTGGTATTCACTGCATTCCCACCCTGTGGTGAGCCTCATGCTTGGT s panTro5.chr6 173593166 90 + 175400573 CTG----TGATGATTGAAAGTGATAACATCCTTCAGTGCCTCTATCCAGTGGTATTCACTGCGTTCCCACCCTGTGGTGAGCCTCATGCTTGGT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171826321 90 + 173848474 CTG----TGATGATTGAAAGTGATAAGATCCTTCAGTGCCTCTATCCAGTGGTATTCACTGCGTTCCCACCCTCTGGTGAGCCTCATGCTTGGT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11509565 90 - 12463322 CTG----TGATGATTGAAAGTGATAAGATCCTTCAGTGCTTCTATCCAGTGGTATTCACTGCGTTCCCACCCTGTGGTGAGCCTCATGCTTGGT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156338930 90 + 157873769 CTG----TGATGATTGAAAGTGATAAGATCCTTCAGTGCCTCTATCCAGTGGTATTAGCTGCGTTCCCACCCTGTGGTGAGCCTCATGCTTGGT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170365039 90 + 172585720 CTA----TGATGATTGAAGGTGATAAGATCCTTCAATGCCTTTATCCAGTGGTATTAACTGCATTCCCACCCTGTGGTGAATCTCACGCTTGGT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169110341 90 - 170955103 CTA----TGATGATTGAAGGTGATAAGATCCTTCAATGCCTTTATCCAGTGGTATTAACTGCATTCCCACCCTGTGGTGAATCTCACGCTTGGT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8396509 90 + 10161646 CTA----TGATGATTGAAGGTGATAAGATCCTTCAATGCCTTTATCCAGTGGTATTAACTGCATTCCCACCCTGTGGTGAATCTCATGCTTGGT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1428067 90 + 3144229 CTA----TGATGATTGAAGGTGATAAGATCCTTCAATGCCTTTATCCAGTGGCATTAACTGCATTCCCACCCTGTGATGAATCTCATGCTTGGT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96714529 90 + 98384682 CTA----TGATGACTGAAGGTGATAAGATCCTTCAATGCCTTTATCCAGTGGTATTAACTGCGTTCCCACCCTGTGGTGAATCTCACGCTTGGT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8250429 90 - 10857215 CTA----TGATGATTGAAGGTGATAAGATCCTTCAATGCCTTTATCCAGTGGCATTAACTGCATTCCCACCCTGTGGTGAATCTCATGCTTGGT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15639649 80 - 23502949 CTA----TGATGACTGAAGGTGAT----------AATGCCTTTATCCAGCAGTATTAACTGCCTTCCCACCCTGTGGTGAGCCTCATGCTTGGT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169922547 89 + 171630274 CTG----TGATGA-TGAGGGTGACAAGATCCTTCACTGCCTTCACTCAACAGTATTAACTAGGTCCCCACCCAGAGGTGAGCCTCTTGCTTGGT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1324159 90 - 2905041 CTG----TGCTGACTGAGGGTGATAAGGTCCTTCACTGCCTTTATTCAATGGTATTAACTAGGTCCCCACCCAGTACTGAGCCTCTTGCTTGGT i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1287033 89 - 2164891 CTG----TGATGACTGAAGGTGA-AAGGTCCTTCACTGCTTTTATTCAATGGTATTAACTATGTCCCCACCCAGTGGTGAGCCTCTTGCTTAGT i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1534292 90 - 1813869 CTG----TGCTGACTGAGGGTGATAAGGTCCTTCACTGCCTTTATTCAATGGTATTAACTACGTCCCCACCCAGTGGTGAGCCTCTCGCTTGGT i aotNan1.NW_018494782v1 C 0 C 0 s canFam3.chr1 56204798 92 + 122678785 CTGTGCCTGATGTTTGAAGGTGGCAACAATATGGAGTTCTTTACTCCAAAAGTAGTCATTGGATTCCCACTCTGAG--GAGCCATACACTTGGT i canFam3.chr1 I 145 I 2167 e otoGar3.GL873575 10973424 2113 - 12073884 I e dasNov3.JH569188 599054 8914 + 760995 I a score=135695.000000 s hg38.chr6_KB021644v2_alt 136721 14 + 185823 GATGCAGGGTGAGG s panTro5.chr6 173593256 14 + 175400573 GATGCAGGGTGAGG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171826411 14 + 173848474 GATGCAGGGTGAGG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11509655 14 - 12463322 GATGCAGGGTGAGG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156339020 14 + 157873769 GACGCAGGGTGAGG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170365129 14 + 172585720 GATGCAGGGAGAGG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169110431 14 - 170955103 GATGCAGGGAGAGG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8396599 14 + 10161646 GATGCAGGGAGAGG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1428157 14 + 3144229 GATGCAGGGAGAGG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96714619 14 + 98384682 GATGCAGGGAGAGG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8250519 14 - 10857215 GATGCAGGGAGAGG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15639729 14 - 23502949 GATGCAGGGTGAGG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169922636 14 + 171630274 GACTCAGTGTGAGG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1324249 14 - 2905041 GACACAGGGTGAGG i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1287122 14 - 2164891 GATGCAGGGTGAGG i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1534382 14 - 1813869 GACGCAGGGTGAGG i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10973424 2113 - 12073884 I e dasNov3.JH569188 599054 8914 + 760995 I e canFam3.chr1 56204890 2167 + 122678785 I a score=780751.000000 s hg38.chr6_KB021644v2_alt 136735 84 + 185823 AGGCGGGGAGG------------------GGACTACCCACGGAGAGCCTGGAGGCTCAGGTGTG-CTCAG-GGGG----GCCTGGTGCACTTGGCCTTTTGGGAA-TGC s panTro5.chr6 173593270 85 + 175400573 AGGCGGGGAGG------------------GGACTACCCACGGAGAGCCTGGAGGCTCAGGTGTG-CTCAG-GGGG----GCCTGGTGCACTTGGCCTTTTGGGAAGTGC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171826425 85 + 173848474 AGGCGGGGAGG------------------GGACTACCCACGGAGAGCCTGGAGGCTCAGGTGTG-CTCAG-GGGG----GCCTGGTGCACTTGGCCTTTTGGGAAGTGC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11509669 85 - 12463322 AGGCGGGGAGG------------------GGACTACCCACGGAGAGCCTAGAGGCTCAGGTGTG-CTCAG-GGGG----GCCTGGTGCACTTGGCCTTTTGGGAAGTGC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156339034 85 + 157873769 AGGCAGGGAGG------------------GGACCACCCACGGAGAGCCTGGAGGCTCAGGTGGG-CTCAG-GGGG----GCCTGGTGCACTTGGCCTTTTGGGAAGTGC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170365143 85 + 172585720 AGGCGGGGAGG------------------GGAGGACCCACGGAGAGCCTGGAGGCTTGGGTGGG-CTTAG-GGGG----GCCTGGTGCACTTGGCCTTTTGGGAAGTGC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169110445 85 - 170955103 AGGCGGGGAGG------------------GGAGGACCCACGGAGAGCCTGGAGGCTTGGGTGGG-CTTAG-GGGG----GCCTGGTGCACTTGGCCTTTTGGGAAGTGC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8396613 103 + 10161646 AGGCGGGGAGGGGAGGACCCACGGAGAGCGGAGGACCCACGGAGAGCCTGGAGGCTTGGGTGGG-CTTAG-GGGG----GCCTGGTGCACTTGGCCTTTTGGGAAGTGC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1428171 85 + 3144229 AGGCGGGGAGG------------------GGAGGACCCACGGAGAGCCTGGAGGCTTGGGTGGG-CTTAG-GGGG----GCCTGGTGCACTTGGCCTTTTGGGAAGTGC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96714633 89 + 98384682 AGGCGGGGAGG------------------GGAGGACCCACGGAGAGCCTGGAGGCTTGGATGGG-CTTGG-GGGGGCGCGCCTGGTGCACTTCGCCTTTTGGGAAGTGC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8250533 85 - 10857215 AGGCGGGGAGG------------------GGAGGACCCACGGAGAGCCTGGAGGCTTGGGTGGG-CTTAG-GGGG----GCCTGGTGCACTTGGCCTTTTGGGAAGTGT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15639743 84 - 23502949 AGGCTGGGAGG------------------GGAGGACCCATGGAGAGCCTGGAGGCTTGGGTGGG-CTTAG-GGG-----GCCTGGTGCACTTGGCCTTTTGGGAAGTGC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169922650 72 + 171630274 ACGCGGGGAAG------------------GGAGGGC-----TAGAGGCT-------CGGGTGGG-CTCAG-GAGG----GCCTGGTGCACTTGG-CTTTTGTACAGTGT i calJac3.chr4 C 0 I 1123 s saiBol1.JH378287 1324263 83 - 2905041 AGGTGGGGAGG------------------GGAGGACCCCCGTAGAGCCTGGGGTTGCGGGTGGG-CTCAG-GAGG----GCCTG--GCACTTGGCCTTTTGGACAGTGC i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1287136 85 - 2164891 AGGCAGGGAGG------------------GGAGGACCCACGGAGAGCCTGGGGGCTCGGGTGGG-CTCAG-GAGG----GCCTGGTGCAGTTGGCCTGTTGGACAGTAC i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1534396 85 - 1813869 AGGCGGGGAGG------------------GGAGGACCCACGGAGAGCCTGGGGGCTCGGGTGGG-CTCAG-GAAG----GTCTGGTGCATTTGGCCTTTTGGACGGTGC i aotNan1.NW_018494782v1 C 0 C 0 s dasNov3.JH569188 607968 87 + 760995 AGGCGGTGAGA------------------GGGACCCACAAGGAAAACTGGGAAGCATGTATGGATCTCAGTGAGG----AACTGGTGCAAGTGGTCTTTCAGGAAATAT i dasNov3.JH569188 I 8914 C 0 e otoGar3.GL873575 10973424 2113 - 12073884 I e canFam3.chr1 56204890 2167 + 122678785 I a score=277416.000000 s hg38.chr6_KB021644v2_alt 136819 33 + 185823 AGAAG-TCCAGGGAATTGGTT-TATTCAGGGACCT s panTro5.chr6 173593355 33 + 175400573 AGAAG-TCCAGGGAATTGGTT-TATTCGGGGACCT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171826510 33 + 173848474 AGAAG-TCCAGGGAATTGGTT-TATTCGGGGACCT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11509754 33 - 12463322 AGAAG-TCCAGGGAATTGGTT-TATTCAGGGACCT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156339119 32 + 157873769 AGAAG-TCCAGGGAATCGG-T-TATTCAGGGACCT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170365228 33 + 172585720 GGAAG-CCCAGGGAATTGGTT-TATTCAGGGACCT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169110530 33 - 170955103 GGAAG-CCCAGGGAATTGGTT-TATTCAGGGACCT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8396716 33 + 10161646 GGAAG-CCCAGGGAATTGGTT-TATTCAGGGACCT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1428256 33 + 3144229 GGAAG-CCCAGGGAATTGGTT-TATTCAGGGACCT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96714722 33 + 98384682 GGAAG-CCCAGGGAATTGGTT-TATTCAGGGACCT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8250618 33 - 10857215 GGAAG-CCCAGGGAATTGGTT-TATTCAGGGACCT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15639827 33 - 23502949 GGAAG-CCCAGGAAATTGGTT-TATTCAGGGACCT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169923845 32 + 171630274 AGAAC-CCCAGGAACT-GGTT-TATTTGGGGATCA i calJac3.chr4 I 1123 C 0 s saiBol1.JH378287 1324346 33 - 2905041 AGAACTCCCGGGACCT-GGTT-TATTCAGGGATCG i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1287221 32 - 2164891 AGAAC-TCCAGGGAGT-GGTT-TATTCAGGGATCG i cebCap1.NW_016107695v1 C 0 I 1709 s aotNan1.NW_018494782v1 1534481 32 - 1813869 AGAAC-TCCAGGGAGT-GGTT-TATTCGGGGATCG i aotNan1.NW_018494782v1 C 0 C 0 s dasNov3.JH569188 608055 34 + 760995 AGCAT-TCCACGAAACTGATTATTTTCAGGGATTA i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10973424 2113 - 12073884 I e canFam3.chr1 56204890 2167 + 122678785 I a score=145448.000000 s hg38.chr6_KB021644v2_alt 136852 16 + 185823 -GGCTCTGTGCCTACAT s panTro5.chr6 173593388 16 + 175400573 -GGCTCTGTGCCTACAT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171826543 16 + 173848474 -GGCTCTGTGCCTACAT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11509787 16 - 12463322 -GGCTCTGTGCCTACAT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156339151 16 + 157873769 -GGCTCTGTGCCCACGT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170365261 16 + 172585720 -GGCCCTGTGCCCAAGT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169110563 16 - 170955103 -GGCCCTGTGCCCAAGT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8396749 16 + 10161646 -GGCCCTGTGCCCAAGT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1428289 16 + 3144229 -GGCCCTGTGCCCAAGT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96714755 16 + 98384682 -GGCCCTGTGCCCAAGT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8250651 16 - 10857215 -GGCCCTGTGCCCAAGT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15639860 16 - 23502949 -GGCTCTGTGCCCAAGT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169923877 16 + 171630274 -GGCTCTGTGTCCACAC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1324379 16 - 2905041 -GGCTCTGCGTCCACAC i saiBol1.JH378287 C 0 I 363 s cebCap1.NW_016107695v1 1288962 16 - 2164891 -GGCTCTGTGTCCACAC i cebCap1.NW_016107695v1 I 1709 C 0 s aotNan1.NW_018494782v1 1534513 16 - 1813869 -GGCTCTGTGTCCACAT i aotNan1.NW_018494782v1 C 0 I 308 s dasNov3.JH569188 608089 17 + 760995 GGTTGCTGCACCCACAT i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10973424 2113 - 12073884 I e canFam3.chr1 56204890 2167 + 122678785 I a score=2894622.000000 s hg38.chr6_KB021644v2_alt 136868 306 + 185823 GCTCT-AAGTGAGGAGCCATAGGCCCTACCAG-------TCCCCATCTCCGAGGGCAGGAAGCCAGACGTGAGCATTGAGG-AAATGGAGGCACTGGGGAGGTATCATCCAGGGTTCTTGCTCA---CCAGGCCTTTGC---ATAGCAGTGGGGAGAGAACGGGCCCAGGGAGGACTCACCAAAGACCCATGGGAGCTGCATGGAGCATCCCAGGGCCCCAGTGCTCCCTCCTTCCACAATG----------------------------------------TGGATGGCAGGAGGGGTATTCTGAGGACCCTCTACGTGGGCCAGCCTTTCATTTTCCTTT-GCATCTTTCAATGGAGTTA s panTro5.chr6 173593404 306 + 175400573 GCTCT-AAGTGAGGAGCCATAGGCCCTACCAG-------TCCCCATCTCCGAGGGCAGGCAGCCAGACGTGAGCATTGAGG-AAATGGAGGCACTGGGGAGGTATCATCCAGGGTTCTTGCTCA---CCAGGCCTTTGC---ATAGCAGTGGGGAGAGAACGGGCCCAGGGAGGACTCACCAAAGACCCATGGGAGCTGCATGGAGCATCCCAGGGCCCCAGTGCTCCCTCCTTCCACGATG----------------------------------------TGGATGGCAGGAGGGGTATTCTGAGGACCCTCTACGTAGGCCAGCCTTTCATTTTCCTTT-GCATCTTTCAATGCAGTTA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171826559 306 + 173848474 GCTCT-AAGTGAGGAGCCATAGGCCCTACCAG-------TCCCCATCTCCGAGGGCAGGCAGCCAGACGTGAGCATTGAGG-AAATGGAGGCACTGGGGAGGTATCATCCAGGGTTCTTGCTCA---CCAGGCCTTTGC---ATAGCAGTGGGGAGAGAACGGGCCCAGGGAGGACTCACCAAAGACCCATGGGAGCTGCATGGAGCATCCCAGGGCCCCAGTGCTCCCTCCTTCCACGATG----------------------------------------TGGATGGCAGGAGGGGTATTCTGAGGACCCTCTACGTAGGCCAGCCTTTCACTTTCCTTT-GCATCTTTCAATGCAGTTA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11509803 306 - 12463322 GCTCT-AAGTGAGGAGCCATAGGCCCTACCAG-------TCCCCATCTCCGAGGGCAGGCAGCCAGACGTGAGCATTGAGG-AAATGGAGGCACTGGGGAGGTATCATCCAGGGTTCTTGCTCA---CCAGGTCTTTGC---ATAGCAGTGGGGAGAGAACGGGCCCAGGGAGGACTCACCAAAGACCCATGGGAGCTGCATGGAGCATCCCAGGGCCCCAGTGCTCCCTCCTTCCACGATG----------------------------------------TGGATGGCAGGAGGGGTATTCTGAGGACCCTCTACGTGGGCCAGCCTTTCATTTTCCCTT-GCATCTTTCAATGGAGTTA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156339167 306 + 157873769 GCTCT-AAGTGAGGAGCCATAGGCCCTACCAG-------TCCCCATCTCCCAGGGCAGGCAGCCAGGTGTGAGCGTTGAGG-AAATGGAGGCACTGGGGAGGTATCATCCAGGGTTCTTGCTCA---CCAGGCCTTTGC---ATAGCAGTGGGGAGAGAATGGGCCCAGGGAAGACTCACCAAAGACCCACGGGAGCTGCACAGAGCGTCCCAGGGCCCCAGGGCTCCCTCCTTCCACGATG----------------------------------------TGGATGGCAGGAGGGGTATTCTGAGGACCCTCTACATGGGCCAGCCTTTCATTTTCCTTT-GCATCTTTCAGTGGAGTTA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170365277 306 + 172585720 GCCCT-AAGTGAGGAGTCCTAGGCTCTACGAG-------TCCCCATCTCTGAGGGCAGGTGGCCAGACATGAGTGTTGAGG-AACTGGAGGCACTAGGGAGGTATCATCCAGGGTTCTTGCTCA---CTGGGCCTTTGC---ATAGCAGTGGGGAGAGAACGGGCCCAGGCAGGACTCACCAAAGACCCATGGGAGCTGCACAAAGTATCCCAGGGCCCCAGCGCTCCCTCCTTCCACAATG----------------------------------------TGGATGGCAGGAGGGGGATTCTGAGGACCCTCTACATGGACCAGCCTTTCATTTTTCTTT-GCATCTTTCAATGGAGTTA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169110579 306 - 170955103 GCCCT-AAGTGAGGAGTCCTAGGCTCTACGAG-------TCCCCATCTCTGAGGGCAGGTGGCCAGACATGAGTGTTGAGG-AACTGGAGGCACTAGGGAGGTATCATCCAGGGTTCTTGCTCA---CTGGGCCTTTGC---GTAGCAGTGGGGAGAGAACGGGCCCAGGCAGGACTCACCAAAGACCCATGGGAGCTGCACGAAGCGTCCCAGGGCCCCAGCGCTCCCTCCTTCCACAATG----------------------------------------TGGATGGCAGGAGGGGGATTCTGAGGACCCTCTACATGGACCAGCCTTTCATTTTTCTTT-GCATCTTTCAATGGAGTTA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8396765 306 + 10161646 GCCCT-AAGTGAGGAGTCCTAGGCTCTACGAG-------TCCCCATCTCTGAGGGCAGGTGGCCAGACATGAGTGTTGAGG-AACTGGAGGCACTAGGGAGGTATCATCCAGGGTTCTTGCTCA---CTGGGCCTTTGC---GTAGCAGTGGGGAGAGAACGGGCCCAGGCAAGACTCACCAAAGACCCATGGGAGCTGCACGAAGCGTTCCAGGGCCCCAGCGCTCCCTCCTTCCACAATG----------------------------------------TGGATGGCAGGAGGGGGATTCTGAGGACCCTCTACATGGACCAGCCTTTCATTTTTCTTT-GCATCTTTCAATGGAGTTA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1428305 306 + 3144229 GCCCT-AAGTGAGGAGCCCTAGGCTTTACGAG-------TCCCCATCTCTGAGGGCAGGTGGCCAGACATGAGTGTTGAGG-AACTGGAGGCACTAGGGAGGTATCATCCAGGGTTCTTGCTCA---CTGGGCCTTTGC---GTAGCAGTGGGGAGAGAACGGGCCCAGGCAGGACTCACCAAAGACCCATGGGAGCTGCACGGAGCGTCCCAGGGCCCCAGCGCTCCCTCCTTCCACAATG----------------------------------------TGGATGGCAGGAGGGGGATTCTGAGGACCCTCTACATGGACCAGCCTTTCATTTTTGTTT-GCATCTTTCAATGGAGTTA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96714771 306 + 98384682 GCCCT-AAGTGAGGAGCCCTAGGCTCTACCAG-------TCCCCATCTCGGAGGGCAGGTGGCCAGACATGAGTGTTGAGG-AACTGGAGGCACTAGGGAGGTATCATCCAGGGTTCTTGCTCA---CTGGGCCTTTGC---GTAGCAGTGGGGAGAGAACGGGCCCAGGGAGGACTCACCAAAGACCCATGGGAGCTGCACGGAGCGTCCCAGGGCCCCAGCGCTCCCTCCTTCCACAATG----------------------------------------TGGATGGCAGGAGGGGGATTCTGAGGACCCTCTACATGGACCAGCCTTTCATTTTTCTTT-GCATCTTTCAATGGAGTTA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8250667 306 - 10857215 GCCCT-AAGTGAGGAGCCCTAGGGTCTACGAG-------TCCCCATCTCTGAGGGCAGGTGGCCAGACATGAGTGTTGAGG-AACTGGAGGCACTAGGGAGGTATCATCCAGGGTTCTTGCTCA---CTGGGCCTTTGC---GTAGCAGTGGGGAGAGAACGGGCCCAGGCAGGACTCACCAAAGACCCACGGGAGCTGCACGGAGCGTCCCAGGGCCCCAGCGCTCCCTCCTTCCACAATG----------------------------------------TGGATGGCAGGAGGGGGATTCTGAGGACCCTCTACATGGACCAGCCTTTCATTTTTGTTT-GCATCTTTCAATGGAGTTA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15639876 306 - 23502949 GCTCT-AAGTGAGAAGCCCTAGGCCCTACCAG-------TCCCCATCTCTGAGGGCAGGTAGCCAGACATGAGCGTTGAGG-AGCTGGAGGTACTAGGGAGGTATCATCCAGGGTTCTTGCTCA---CTAGGCCTTTGC---GTAGCAGTGGGGAGAGAACGGGCCCAGGGAGGACTCACCAAAGACCCATGGGAGCTGCACAGAGCATCCCAGGGCCCCAGCGCTCCCTCCTTCCACAATG----------------------------------------TGGATGGTAGGAGGGGGATTCTGAGGACCCTCTACATGGACCAGCCTTTCATTTTTCTTT-GCATCTTTCAATGGAGTTA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169923893 302 + 171630274 GCTCT-AAGTGAGGAGCCATGGGCCCAACTAG-------TCCACATCTCTGAGTGCAGATGGCCAGATGTGAGCG-TGAGG-AGCTGGAGACAT-GGGGTGCTATCATCCAGGATTCTCATTCA---CTGGGCCTTTGG---GTAGCAGTGGGGAGAGGAC-GGCTCAGGGAGGACTCACCACAGCCCCACAGGAGCTGCTCAGAGTGCCCACAGACCCCAGCACTCCCTCCTTCCAGGATG----------------------------------------CGGATGGCATGAGGGGGATGCTGAGGACCCTCTGCATGAACCAGTCTTTCGTTTTCCTTT-GCATCTTTCAATGGAGTT- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1324758 301 - 2905041 GCTCT-AAGTAAAGAGCCATGGGCCCTACTAG-------TCCCCATCACGGAGTGCAGATGGCCGGACGTGAGCC-TGAGG-AGCTGGAGACAC-AGGGCGGTATCATCCAGGGTTCTTGCTCA---CCAGGCCTTTGC---GTAGCAGTGGGGAGTGGAG-GGCCCAGGAAGGACTTAGCACAGCCCCTCGGGAACTGCGCAGAGTGCCCCCAGACCCCAGCACTCCCTCCTTCCAGGATG----------------------------------------CAGACGGCATGA-GGGGATGCTGAGGACCCTCCACGTGGGCCAGCCTTTCGTTTTCTTTT-GCATCTTTCAATGGAGTT- i saiBol1.JH378287 I 363 C 0 s cebCap1.NW_016107695v1 1288978 300 - 2164891 GCTCT-GAGTGAGGAGCCAT-GGCCCTACTAG-------TCCCCATCTCTGAGTGCAGATGGCCGGACGTGAGCG-TGAGG-AGCTGGAGACAT-GGGGTGGTATCATCCAGGGTTCTGGCTCA---CCGGGCCTTTGC---ATAGCAATGGGGAGCGGAC-AGCCCAGGGAGGACTTAGCACAGCCCCGCGGGAGCTGCGCAGAGTGCCCCCAGACGCCAGCACTCCCTCCTTCCAGGATG----------------------------------------TGGATGGCATGAGCGGGATGCTGAGGA-CCTCTACGTGGGCCAGCCTTTCGTTTTCCTTT-GCATCTTTCAATGGAGTT- i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1534837 302 - 1813869 GCTCT-GAGTGAGGAGCCATGGGCCCTAATGG-------CCCCCATCTCTGAGTGCAGATGGCCAGACATGAGCG-TGAGG-AGCTGGAGACAC-GGGGTGGTATCATCCAGGGTTCTCACTCA---CTGGGCCTTTGC---GTAGCAGTGGGGAGCGGAC-AGCCCAGGGAGGACTCACCACAGCCCTGCGGGAGCTGCACAGAGTGCCCCCAGAGCCCAGCACTCCCTCCTCCCAGGATG----------------------------------------CAGATGGCATGAGGGGGAAGCTGAGGCCCCTCTACATGGGCCAGCCTTTCGTTTTCCTTT-GCATCTTTCAATGGAGTT- i aotNan1.NW_018494782v1 I 308 C 0 s dasNov3.JH569188 608106 356 + 760995 GCTCTGGAATCAAGGGAAGTAGATACTTCCAGTAAGTGCTTTTTGCTTCTGAGGTCATATGACTGGGCATGAATTTTGAGGAAACTGGAGACACTTATGAGATATTTTTCAATGCTTAATTTCAGGGCTTGGACTTCACCATTTTGCTGTGGGAAAAGAATGGGTATAGGGAGAATTCAACAAAGGCCAGCAGAGAC------AAATTCCTTAGCACCACAATATTCCCATTTTCCATGAAGCTTTGTATACAAATCATAACTTTGTTTAATCACTCTCCAACAGATTGAAATAAGAGAAATCAGAGGGCCCTTTACAGTGGCCAATGTTTCATTTTTCTTTGGCATCTTTCAACTGTGTTA i dasNov3.JH569188 C 0 I 495 e otoGar3.GL873575 10973424 2113 - 12073884 I e canFam3.chr1 56204890 2167 + 122678785 I a score=2633913.000000 s hg38.chr6_KB021644v2_alt 137174 309 + 185823 AAAGTAGAACCTTCCTACCCCCATTGAGGACAGGGGCACCTAA---------------CTTCCACACGCCACGGAAACCCCCAGGGCACTTGAGGGCTGATGTCCGGTAGGGGCCAGCACCTGCTCCTGGAATGAATTAATCAGCAAAATCATTGCAGCCCCCACATTATTTTCAACAAATATTAAGGTGTTCTCTAATCTTTCTCCCATTTTGGttattcatagtgtatcaccactatctgaaatcaccttgactatttgtctaggtgaattatctgtctc-cccacgaggatg---------tacactttatacttacaaggtcctgttcat s panTro5.chr6 173593710 309 + 175400573 AAAGTAGAACCTTCCTACCCCCATTGAGGACAGGGGCACCTAA---------------CTTCCACACGCCATGGAAACCCCCAGGGCACTTGAGGGCTGATGTCCAGTAGGGGCCAACACCTGCTCCTGGAATGAATTAATCAGCAAAATCATTGCAGCCCCCACATTATTTTCAACAAATGTTAAGGTGTTCTCTAATCTTTCACCCATTTTGGttattcatagtgtatcaccactatctgaaatcaccttgactagttgtctaggtgaattatctgtctc-cccacgaggatg---------tacactttatacttacaaggtcctgttcat i panTro5.chr6 C 0 C 0 s panPan2.chr6 171826865 309 + 173848474 AAAGTAGAACCTTCCTACCCCCATTGAGGACAGGGGCACCTAA---------------CTTCCACACGCCATGGAAACCCCCAGGGCACTTGAGGGCTGATGTCCAGTAGGGGCCAACACCTGCTCCTGGAATGAATTAATCAGCAAAATCATTGCAGCCCCCACATTATTTTCAACAAATGTTAAGGTGTTCTCTAATCTTTCACCCATTTTGGttattcatagtgtatcaccactatctgaaatcaccttgactagttgtctaggtgaattatctgtctc-cccacgaggatg---------tacactttatacttacaaggtcctgttcat i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11510109 308 - 12463322 AAAGTAGAACCTTCCTACCCCCATTCAGGAC-GGGGCACCTAA---------------CTTCCACATGCCACGGAAACCCCCAGGGCACTTGAGGGCTGATGTCCAGTAGGGGCCAGCACCTGCTCCTGGAATGAATTAATCAGCAAAATCATTGCAGCCCCCACATTATTTTCAACAAATATTAAGGTGTTCTCTAATCTTTCACCCATTTTGGttattcatagtgtatcaccactatctgaaatcaccttgactagttgtctaggtgaattatctgtctc-cccacgaggatg---------tacactttatacttacaaggtcctgttcat i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156339473 318 + 157873769 AAAGTGAAACCTTCCTACCCCCATTGAGGACAGGGGCTCCTAA---------------CCTCCACACGCCACAGAAACCCCCAGGGCACTTGAGGGCTGATGTCCAGGAGGGGCCAGCACCTACTCCTGGAATGAATTAGTCAGCAAAATCATTGCAGCCCCCACATTGTTTTCAACAAATATTAACGTGTTCTCTAATCTTTCGCCTATCTTGGTTATTCATAGTGCATCACCACTATCTGAAATCACCTCGACTAGTTGTCTAGGTGAATTATCTGTCTC-CCCAAGAGGACGTACACTTTATACACTTTATACTTACAAGGTCCTGTTCAT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170365583 310 + 172585720 AAAGGGGAACCTTCCTACCTCCATTGAGGACAGGGGCTCCTGC---------------CTTCCACACACCACGGAAACCCTCAGGGCACTTGAGGACTGACGTCCAGTAGGGGCCAGCACCTGCTCCTGGAATGAATTAATCAGCAAAATCATTGCAGCCCCCACATTATTTTAAATAAATATTAAGGTGTTCTCTAATCTTTCGcctattttagttattcacagtgcatcaccactatctgaaatctccttgactagttgtctaggtgaatgatctgtctctcccacgaggaca---------tacactttatacttacaaggtcctgtccat i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169110885 310 - 170955103 AAAGGGGAACCTTCCTACCTCCATTGAGGACAGGGGCTCCTGC---------------CTTCCACACACCACGGAAACCCTCAGGGCACTTGAGGACTGACGTCCAGTAGGGGCCAGCACCTGCTCCTGGAATGAATTAATCAGCAAAATCATTGCAGCCCCCACATTATTTTAAATAAATATTAAGGTGTTCTCTAATCTTTTGcctattttagttattcaccgtgcatcaccactatctgaaatcaccttgactagttgtctaggtgaatgatctgtctctcccacgaggaca---------tacactttatacttacaaggtcctgtccat i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8397071 310 + 10161646 AAAGGGGAACCTTCCTACCTCCATTGAGGACAGGGGCTCCTGC---------------CTTCCACACACCATGGAAACCCTCAGGGCACTTGAGGACTGACGTCCAGTAGGGGCCAGCACCTGCTCCTGGAATGAATTAATCAGCAAAATCATTACAGCCCCCACATTATTTTAAATAAATATTAAGGTGTTCTCTAATCTTTTGcctattttagttattcacagtgcatcaccactatctgaaatcaccttgactagttgtctaggtgaatgatctgtctctcccacgaggaca---------tacactttatacttacaaggtcctgtccat i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1428611 310 + 3144229 AAAGGGAAACCTTTCTACCTCCATTGAGGACAGGGGCTCCTGC---------------CTTCCACACACCACGGAAACCCTCAGGGCACTTGAGGGCTGACGTCCAGTAGGGGCCAGCACCTGCTCCTGGAATGAATTAATCAGCAAAATCATTGCAGCCCCCACATTATTTTAAATAAATATTAAGGTTTTCTCTAGTCTTTCGcctattttagttattcacagtgcatcaccactatctgaaatcaccttgactagttgtctaggtgaatgatctgtctctcccacgaggaca---------tacactttatacttacaaggttctgtccat i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96715077 310 + 98384682 AAAGGGGAACCTTCCTACCCCCATTGAGGACAGGGGCTCCTGC---------------CTTCCACACACCACGGAAACCCTCAGGGCACTTGAGGACTGACGTCCAGTAGGGGCCAGCACCTGCTCCTGGAATGAATTAATCAGCAAAATCATTGCAGCCCCCACATTATTTTAAATAAATATTAAGGTGTTCTCTAAccttccgcctattttagttattcacagtgcatcaccactatctgaaatcaccttggctagttgtctaggtgaacgatctgtctctcccatgaggacg---------tacactttatacttacaaggtcctgtccat i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8250973 309 - 10857215 AAAGGGAAACCTTCCTACCTCCATTGAGGACAGGGGCTCCTGC---------------CTTCCACACACCACAGAAACCCTCAGGGCACTTGAGGACTGATGTCCAGTAGGGGCCAGCACCTGCTCCTGGAATGAATTAATCAGCAAAATCATTGCAGCCCCTACATTATTTTAAATAAATATTAAGGT-TTCTCTAATCTTTCGcctattttagttattcatagtgcatcaccactatctgaaatcaccttgactagttgtctaggtaaatgatctgtctctcccacgaggaca---------tacactttacacttacaaggtcctgtccat i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15640182 310 - 23502949 AAAGGGGAACCTTCCTACCTCCATTGAGGACAGGGGCTCCTGC---------------CTTCCACACACCACGGAAACCCTCAGGGCACTTGAGGGCTGACGTCCAGTAGGGGCCAGCACCTGCTCCTGGAATGAATTAATCAGCAAAATCATTGCAGCCCCCACATTATTTTAAACAAATACTAAGGTGTTCTCTAATCTTTCAcctattttagttattcatagtgcatcaccactatccgaaatcaccttgactagttgtctaggtgaattgtctgtctctcccacgaggacg---------tacactttatacttacaaggtcctgtccct i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169924195 308 + 171630274 AGCGTGGAACATTCCTACCCCTGTGGAGGTCAGGGGCTCCTACTGGTGTGGACGGGGTTTTCTACATGCCACAGATACCC-CAGGCCACGTGAGGGCTGATGTCCAGTA-GCACCAGCACCTGCTTCTGGAGTGAATTCATCA-----------GCAGCCTCCGCATTATTTTCAACATGTATTAACGTGTTCTCCAATCTTGGGCCTGTTTTAGTTTCTAGTAGTGCATCGCTGCCATCTGACACCACCTTGACTAGTTGTCTGGGTTAATTATGTCTCTC----ACCAGGAGG---------TCCGCTCTGTACTTACAAGCTCCTGTTCGT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1325059 316 - 2905041 AACGTGGAACATTCCTACCCCTGTGGAGGCCAGGGGCTCCTACTGGTGTGGACGGGGTTTTCTACATGCCACGGA-AACC-CAGTCCACTTGAGGGCTGACGCGCAGTA-ACACCAGCACCTGCTTCTGCAATGAATTCATCAGCAACATCGTTGCAGCCCCCGCGTTATTTTCAACACGCATTAACGTGTTCTCCAATCTTGGGCCTATTTTAGTTTCTGGCA--GCATCACTGCTGTCTGAAATCACCTTGGCTGGTTGCCTGGGTTAATGATGTCTCTC----ACCAGGAGG---------TCCACTCTATACTTACAAGCTCCTGTTCCT i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1289278 318 - 2164891 AACATGAAACATTCCTACCCCTGTGGAGGTCAGGGGCTCCTACTGGCGTGGACGGGGTTTTCTACATGCCACGGAAACCT-CGGGCCACTTGAGGGCTGATGTGCAGTT-GCACCAGCACCTGCTTCTGGAATGAATTCATCAGCAACATCGTTGCAGCCCCCGCATTATTTTCAACACGTATTAAAGTGTTCTCCAATCTTGGGCCTATTTTAGTTTCTGGTAGTGCATCACTGCTATCTGA-ATCACCTTGACTGGTTGTCTGGGTTAATTACGTCTCTC----ACCAGGAGG---------TCCACTGTATACTTACAAGCTCCTGTTCAT i cebCap1.NW_016107695v1 C 0 I 248 s aotNan1.NW_018494782v1 1535139 319 - 1813869 AACGTGGAACATTCCTACCCCTGTGGAGGTCAGGGGCTCCTACTGGCATGGACGGGGTTTTCTACACGCCACGGAAACCC-CAGGCTACTTGAGGGCTGATGTCCAGTA-GCACCAGCACCTGCTTCTGGAATGAATTCATCAGCAACATCGTTGCAGCCCCCGTGTTATTTTCATCATGTATTAACGTGTTCTCCAATCTTGGGCCTATTTTAGTTTCTGGTAGTGCATTGCTGCCATCTGAAATCACCTTGACTAGTCATCTGGGCTAATTATGTCTCTC----ACCAGGAGG---------TCCACTCTATACTTACAAGCTCCTGTTCAT i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10973424 2113 - 12073884 I e dasNov3.JH569188 608462 495 + 760995 I e canFam3.chr1 56204890 2167 + 122678785 I a score=2367816.000000 s hg38.chr6_KB021644v2_alt 137483 316 + 185823 ctcactagtccctggttcttcctgtctaaaacaatactacgcctgtagtaggagctcagctgctattcaggtcaatgaaAGGTATGAAGGGGTGACTGAATAATGATTTAATGCAACAAGGTAGGACTTCAGGTGCCCTTGGCGGTCCTGTCATTAGCGGAGTCATTGTGGAAAGAAATGCACCAGTGCTAAGTAGAATTAAGCACGT--AAATAAAGCAGTCGATTTGTTAGGTTAATCCCTTGGCAATAGCTCTCAGTTTATTTTATGGGCACATTCTTATTTTATTTCATTATCATTTATTAGATTCAAAATATT s panTro5.chr6 173594019 316 + 175400573 ctcactagtccctggttcttcctgtctaaaacaatactaggcctgtagtaggagctcagctgctattcaggtcaatgaaAGGTATGAAGGGGTGACTGAATAATGATTTAATGCAAGAAGGTAGGACTTCAGGTGCCCTTGGCGGTCCTGTCATTAGCGGAGTCATTGTGGAAAGAAATGTACCAGTGCTAAGTAGAATTAAGCAGGT--AAATAAAGCAGTCGATTTGTTAGGTTAATCCCTTGGCAATAGCTCTCAGTTTATTTTATGGGCACGTTCTTATTTTATTTCATTATCATTTATTAGATTCAAAATATT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171827174 316 + 173848474 ctcactagtccctggttcttcctgtctaaaacaatactaggcctgtagtaggagctcagctgctattcaggtcaatgaaAGGTATGAAGGGGTGACTGAATAATGATTTAATGCAAGAAGGTAGGACTTCAGGTGCCCTTGGCGGTCCTGTCATTAGCGGAGTCATTGTGGAAAGAAATGTACCAGTGCTAAGTAGAATTAAGCAGGT--AAATAAAGCAGTCGATTTGTTAGGTTAATCCCTTGGCAATAGCTCTCAGTTTATTTTATGGGCACGTTCTTATTTTATTTCATTATCATTTATTAGATTCAAAATATT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11510417 316 - 12463322 ctcactagtccctggttcttcctctctaaaacaatactaggcctgtagtaggagctcagctgctattcaggtcaatgaaAGGTATGAAGGGGTGACTGAATAATGATTTAATGCAAGAAGGTAGGACTTCAGGTGCCCTTGGCGGTCCTGTCATTAGCGGAGTCATTGTGGAAAGAAATGTACCAGTGCTAAGTAGAATTAAGCAGGT--AAATAAAGCAGTCGATTTGTTAGGTTAATCCCTTGGCAATAGCTCTCAGTTTATTTTATGGGCACATTCTTATTTTATTTCATTATCATTCATTAGATTCAAAATATT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156339791 316 + 157873769 CTCGTTAGTCCCTGGTTCTTCCTGTCTAAAACAATACTAGGCCTGTGGTAGGAGCTCAGCTGCTATTCGGGTCAACGAAAGGTATGAAGGGGTGACTGAATAATGATTTAATGTAAGAAGGTAGGACTCCAGGTGCACTTGGTGGTCCTGTCATTAGTGGCGTCATTGTGGAAAGAAATGTACCAGTGCTAAGTAGAATTAAGCAAGT--AAATAAAGCAGTTGATTTGTTAGGTTAATCCCTTGGCAATAGCTCTCAGTTTATTTTATGGGCGCATTCTTATGTTATTTCATTATCATTTATTGGATTCAAAATATT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170365893 316 + 172585720 ctcgttagtccctgcttcttcctgtctaaaacaatactgagcctgtgctaggagctcagctgctattcgggtcaatgaaAGGTATGAAGGGGTGACCGAATAATCATTTAACATAAGAAGGTAGGACTCCAGGTGCCCTTGGCGATCCTGTCATTAGTGCAGTCCTTGTGGAAAGAAATGTAGCAGTGCTAAGTAGAATTAAGCAGGT--AAAAAAAACAGTTGATTTGTTAGGTTAATCCCTTGGCAATGACTCTCAGTTTATTTTATGGGCACATTCTTATTTTATTTCTTTATCATTTATGAGATTCAAAATATT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169111195 317 - 170955103 ctcgttagtccctgcttcttcctgtctaaaacaatactgagcctgtgctaggagctcagctgctatttgggtcaatgaaAGGTATGAAGGGGTGACTGAATAATCATTTAACCTAAGAAGGTAGGACTCCAGGTGCCCTTGGCGATCCTGTCATTAGTGCAGTCCTTGTGGAAAGAAATGTAGCAGTGCTAAGTAGAATTAAGCAGGT-AAAAAAAAGCAGTTGATTTGTTAGGTTAATCCCTTGGCAATGACTCTCAGTTTATTTTATGGGCACATTCTTATTTTATTTCTTTATCATTTATGAGATTCAAAATATT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8397381 318 + 10161646 ctcgttagtccctgcttcttcctgtctaaaacaatactgagcctgtgctaggagctcagctgctatttgggtcaatgaaAGGTATGAAGGGGTGACTGAATAATCATTTAACCTAAGAAGGTAGGACTCCAGGTGCCCTTGGCGATCCTGTCATTAGTGCAGTCCTTGTGGAAAGAAATGTAGCAGTGCTAAGTAGAATTAAGCAGGTAAAAAAAAAGCAGTTGATTTGTTAGGTTAATCCCTTGGCAATGACTCTCAGTTTATTTTATGGGCACATTCTTATTTTATTTCTTTATCATTTATGAGATTCAAAATATT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1428921 316 + 3144229 gtcgttagtccctgcttcttcctgtctaaaacaatactgagcctgtgctaggagctcagctgctattcgggtcaatgaaAGGCATGAAGGGGTGACTGAATAATCATTTAACGTAAGAAGGTAGGACTCCAGGTGCCCTTGGCGATCCTGTCATTAGCAGAGTCCTTGTGGAAAGAAATGTAGCAGTGCTAAGTAGAATTAAGCAGGT--AAAAAAAGCAGTTGATTTGTTAGGTTAATCCCTTGGCAATGACTCTCAGTTTATTTTATGGGCACATTCTTATTTTATTTCTTTATCATTTATGAGATTCAAAATATT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96715387 317 + 98384682 ctcgttagtccctgcttcttcctgtctgaaacaatactgagcctgtggtaggagctcagctgctattcgggtcaatgaaagaTATGAAGGGGTGACTGAATAATGATTTAACGTAAGAAGGTAGGACTCCAGGTGCCCTTGGTGATCCTGTCATTAGCGGAGTCCTTGTGGAAAGAAATGTAGCAGTGCTAAGTAGAATTAAGCAGGT-AAAAAAGAGCAGTTGATTTGTTAGGTTAATCCCTTGGCAATGACTCTCAGTTTATTTTATGGGCACATTCTTATTTTATTTCTTTATCATTTGTTAGATTCAAAATATT i chlSab2.chr13 C 0 I 4 s manLeu1.NW_012106474v1 8251282 317 - 10857215 ctcgttagtccctgcttcttcctgtctaaaacaacactgagcctgtgctaggagctcagctgctattcggatcaatgaaAGGTATGAAAGGGTGACTGAATAATCATTTAACGTAAGAAGGTAGGACTCCAGGTGCCCTTGGCGATCCTGTCATTAGCGGAGTCCTTGTGGAAAGAAATGTAGCAGTGCTAAGTAGAATTAAGCAGGT-AAAAAAAAGCAGTTGATTTGTTAGGTTAATCCCTTGGCAATGACTCTCAGTTTATTTTATGGGCACATTCTTATTTTATTTCTTTATCATTTATGAGATTCAAAATATT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15640492 316 - 23502949 ctcgttagtccctgcttcttcctgtctaaaacaatactgggcctgtggtaggagctcagctgctattcgtgtcaatgaaAGGTATGAAGGGGTGACTGAATAATGATTGAATGTAAGAAGGTAGGACTCCAGGTGCCCTTGGCAGTCCTGTCATTAGCGGAGTCCTTGTGGAAAGAAATGTAGCAGTGCTAAGTAGAATTAAGCGGGT--AAAACAAGCAGTTGATTTGTTAGGTTAATCCCTTGGCAATGACTCTCAGTTTATTTTATGGGCATATTCTTATTTTCTTTCTTTATCATTTATTAGATTCAAAATATT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169924503 287 + 171630274 CTCCCTAGTCCGGGTTCTT-----------------CTGGGGCTGTGCTAGGACCTCAGCTGCTATTCAAGTCCGTCAAAGGGATAAGGGGGTGACTGAACAAGGATCTCATG-AGGCAGGAGGGACTCCAGGTCCTCTTGGGGGTCCCGTCATGAACGCAGTCGTTGTGGAAGGACATGTGGCAGGGCTAAGTGGAATGAAGCAGGT--AAACGAGGCAGGCG-TTTGTTAGGTGAATCCCTCGG----------CAGTTTATTTTATAGATGCATTCTCATTTTATTTTATTATCATTTGCGAGAGTCAAAATATG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1325375 290 - 2905041 CTCGTTGGTCCGGGGTTCTCC---------------CCGGGGCTGTGCTAGGACCTCAGCTGCTGTTCAAGTCAGTCAACGGGCTGA-GGGGTGACCGAACAAGGATCGAATGTAAGCAGGAGGGACTCCGGGTCCTCCTGGTGGCCCCGTCATGAACGGGGTCGTTGTGGAAGGAAATGAGGCAGGGCTAAGAGGGACTCAGCAGCT--AAATGAGGCAGGCGCTTTGTTAGGGGGGTCCCTTGG----------CAGTTGATTTTATAGGTGCATTCTTATTTTATTTCATTATCGTCTGTGAGAGTCAAAATATG i saiBol1.JH378287 C 0 C 0 s aotNan1.NW_018494782v1 1535458 291 - 1813869 CTCGTTAGTCCAGGGTTCTTC---------------CCGGGGCTGTGCTAGGACCTCAGCTGCTCTTCGAGTCAGTGAAAGGGATGAGGGGGTGACTGAACAAGGATCTAACGTGAGCAGGAGGGACTCCAGGTCCTCTTGGTGGTCCCGTCATGAACGGAGTCATTGTGGAAGGAAATGTGGCGGGGCTAAGTGGAATTAAGCAGGT--AAATGAGGCAGGCGATTTGTTAGGTGAATTCCCTGG----------CAGTTTATTTTATAGGTGCATTCTTGTTTTATTTCTTTATCATTTGTGAGAGTCAAAATATG i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10973424 2113 - 12073884 I e cebCap1.NW_016107695v1 1289596 248 - 2164891 I e dasNov3.JH569188 608462 495 + 760995 I e canFam3.chr1 56204890 2167 + 122678785 I a score=2308582.000000 s hg38.chr6_KB021644v2_alt 137799 337 + 185823 ATGAGAGCCTTGAGGACCCATTTAAAATAATCTCCACATCCACAGCCATCGCAGATTATGACAACAAATGTGCTTAATTGAATCATGAACTGTCACACTGACTCCGCTGCCCCACGCTGCGACACTGTTGCACCCCCATGCTGGGAGCTCAGTGACAATGCCAACATCGTGCATCTGTAGTGCAGGGAGTGGAGCCTGCCATGTCTTCACTGTCACGCAGATGGCAATGTCACAGGCACGGCCATTGCTGGGAAATGCTACACAGCTAAGAGACAAATCCCAGCAGTGACGTGGCACATCTCAGAAGTGTAGCTTTGAGTGAGAAAATA----AAAAGTAG s panTro5.chr6 173594335 337 + 175400573 ATGAGAGCCTTGAGGACCCATTTAAAATAATCTCCACATCCACAGCCATCGCAGATTATGACAATAAATGTGCTTAATTGAATCATGAACTGTCACACTGACTCCACTGCCCCACGCTGTGACACTGTTGCACCCCCATGCTGGGAGCTCAGTGACAATGCCAACATCGTGCACCTGTAGTGCAGGGAGTGGAGCCTGCCATGTCTTCACTGTCACGCAGATGGCAATGTCACAAGCACGGCCATTGCTGTGAAATGCTACACAGCTAAGAGACGAATCCCAGCAGTGACATGGCACATCTCAGAAGTGTAGCTTTGAGTGAGAAAATA----AAAAATAG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171827490 337 + 173848474 ATGAGAGCCTTGAGGACCCATTTAAAATAATCTCCACATCCACAGCCATCGCAGATTATGACAATAAATGTGCTTAATTGAATCATGAACTGTCACACTGACTCCACTGCCCCACGCTGTGACACTGTTGCACCCCCATGCTGGGAGCTCAGTGACAATGCCAACATCGTGCACCTGTAGTGCAGGGAGTGGAGCCTGCCATGTCTTCACTGTCACGCAGATGGCAATGTCACAAGCACGGCCATTGCTGTGAAATGCTACACAGCTAAGAGACGAATCCCAGCAGTGACATGGCACATCTCAGAAGTGTAGCTTTGAGTGAGAAAATA----AAAAATAG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11510733 337 - 12463322 ATGAGAGCCTTGAGGACCCATTTAAAATAATCTCCACATCCACAGCCATCGCAGATTATGACAATAAATGTGCTTAATTGAATCATGAACTGTCACACTGACTCTACTGCCCCACGCTGCGACACTGTTGCACCCCCATGCTGGGAGCTCAGTGACAATGCCAACATCGTGCACCTGTAGTGCAGGGAGTGGAGCCTGCCATGTCTTCACTGTCACGCAGATGGCAATGTCACAAGCACGGCCATTGCTGTGAAATGCTACACAGCTAAGAGACGAATCCCAGCAGTGATGTGGCACATCTCAGAAGTGTAGCTTTGAGTGAGAAAATA----AAAAGTAG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156340107 337 + 157873769 ATGAGAGGCTTGAGGACCCATTTAAAATCATCTCCACATCCACAGCCATCGCAGACGATGACAATACATGTGCTTCATTGAATCATGAACTGTCACACTGACTCCGCTGCCCCACGCTGCGACACTGTTGCACCCCCATGCTGGGAGCTCAGTGACAATACCAACGTCGTGCGCCTGTAGCGCAGGGAGTGGAGTCTGCCATGTCTTCGCTGTCACGCACATGGCAATGTCACAAGCATGGCCATTGCTGTGAAATGCTACACAGCTGAGAGACGAATCCCAGCAGTGACATGGCACATCTCAGAAGCGTAGCTTTGAGTGAGAAAATA----AAAAGTAG i nomLeu3.chr3 C 0 M 251 s rheMac8.chr4 170366209 337 + 172585720 ATGAGAGCCTTGAGGACCCATTTAAAATCACCTCCATATCCACAGCCATAGCAGAATATGACAATAGATGTGCTTCATTGAATCACGAACTGCCACACTAACTCCGCTGCCCCACACTGTGACACTGTTGCACCCCCACGCTGGGAGCTCAGTGACAATGCCAGGGTCGTGCACCTGTAGTGCAGGGAGTGGAGGCTGCCATGTCTTCACTGTCACGTACATGGCAATGCCACAGGCACGGCCATTGCTATGACATGCTACACAGCAGAGAGACGAATCCCAGCAGTGACGCGGCACATCTCAGAAGCGTAGCTTTGAGTGAGAAAGTG----AAAAGCAG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169111512 337 - 170955103 ATGAGAGCCTTGAGGACCCATTTAAAATCACCTCCATATCCACAGCCATAGCAGAATATGACAATAGATGTGCTTCATTGAATCACAAACTGCCACACTAACTCCGCTGCCCCACACTGCGACACCGTTGCACCCCCACGCTGGGAGCTCAGTGACAATGCCAGTGTCGTGCACCTGTAGTGCAGGGAGTGGAGGCTGCCATGTCTTCACTGTCACGTACATGGCAATGCCACAGGCACGGCCATTGCTATGACATGCTACACAGCAGAGAGACGAATCCCAGCAGTGACGCGGCACATCTCAGAAGCGTAGCTTTGAGTGAGAAAGTA----AAAAGCAG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8397699 337 + 10161646 ATGAGAGCCTTGAGGACCCATTTAAAATCACCTCCATATCCACAGCCATAGCAGAATATGACAATAGATGTGCTTCATTGAATCACAAACTGCCACACTAACTCCGCTGCCCCACACTGCGACACCGTTGCACCCCCACGCTGGGAGCTCAGTGACAATGCCAGTGTCGTGCACCTGTAGTGCAGGGAGTGGAGGCTGCCATGTCTTCACTGTCACGTACATGGCAATGCCACAGGCACGGCCATTGCTATGACATGCTACACAGCAGAGAGACGAATCCCAGCAGTGACGCGGCACATCTCAGAAGCGTAGCTTTGAGTGAGAAAGTA----AAAAGCAG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1429237 336 + 3144229 ATGAGAGCCTTGAGGACCCATTTAAAATCACCTCCATATCCACAGCCATAGCAGAATATGACAATAGATGTGCTTCATTGAATCACGAACTGCCACACTAACTCCGCTGCCCCACACTGTGACACCGTTGCA-CCCCATGCTGGGAGCTCAGTGACAATGCCAGTGTCGTGCACCTGTAGTGCAGGGAGTGGAGGCTGCCATGTCTTCACTGTCACGTACATGGCAATGCCACAGGCACGGCCATTGCTATGACATGCTACACAACAGAGAGACGAATCCCAGCAGTGACGCGGCACATCTCAGAAGTGTAGCTTTGAGTGAGAAAGTA----AAAAGCAG i cerAty1.NW_012002071v1 C 0 C 0 s manLeu1.NW_012106474v1 8251599 337 - 10857215 ATGAGAGCCTTGAGGACCCATTTAAAATCACCTCCATATCCATAGCCATAGCAGAATATGACAATAGATGTGCTTCATTGAATCACAAACTGCCACACTAACTCCGCTGCCCCACACTGTGATACCGTTGCACCCCCACGCTGGGAGCTCAGTGACAATGCCAATGTCGTGCACCTGTAGTGCAGGGGGTGGAGGCTGCCATGTCTTCACTGTCACATACATGGCAATGCCACAGGCACGGCCATTGCTATGACATGCTACACAGCAGAGAGACGAATCCCAGCAGTGACGTGGCACATCTCAGAAGCGTAGCTTTGAGTGAGAAAGTA----AAAAGCAG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15640808 337 - 23502949 ATGAGAGCCTTGAGGACCCATTTAAAATCACCTCCATATCCACAGCCATAGCAGAATATGACAATAGATGTGCTTCATTGAATCACGAACTGCCACACTGACTCTGCTGCCCCACGCTGCGACACCGTTGCACCCCCATGCTGGGAGCTCAGTGACAATGCCAATGTTGTGCACCTGTAGTGCAGGGAGTGGAGCCTGCCATGTCTTCATTGTCATGCACATGGCAATGTCACAGGCACGGCCATTGCTATGAAATGCTACACAGCAGAGAGACGAATCCCAGCAGTGACGTGGCACATCTCAGAAGTGTAGCTTTGAGTGAGAAAGTA----AAAAGCAG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169924790 337 + 171630274 ATGAGAGCCTTGAGGACCCGTTAAAAATCATCTCTGTCTCCAGAGCCATCGCAGAATATGCCCATAAGTGTGTTTAACTGAATCTCAAACTGTC-TGCTGCCTCCGTGGCCCCATGCTGTCACTCTGTTGCACCCCCATGCTGGGAGCTCAGCGACAGTGCTGACTTCATGCACCTGCAGTGCT--GAGT-GAGACTGCCATGTGTTCGTTGTCACATACATGGCCGTGTCACAAGCACAGCCATTGCTGTGAAATGCTACACAGCAGAGAGACCAGTTACAGCAGGGATGGAGCACGTCTCAGAAGCACAGCTCTGAGTGAGAATGTCAGAAAGAAGTAG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1325665 332 - 2905041 ATGAGAGCCTTGAGGACCCCTTAAAAATCATCTCTGTTTCCAGAGCCATGGCAGAATGTGCCCATACATGTGTTTGATTGGATCTCACACTGTC-GGCTGCCTCCATGGCCCCACGCTGCAACTCTGTTGCACCCCCATGCTGGGAGCTCAGTGACGGTGCCCACTTCATGTGCCTGCGGTGCT-GGAGC-GAGCCTGCCATGTGTTCGCTGTCACACACATGGCAGTGTCACAAGCACAGCCATTGCTGTGAAATGCTCCACAGC--AGAGACCAGTTCCAGCAGGGACAGGGCACGtctcagaagcagagctctgagtgagaaagtc----agaagtgg i saiBol1.JH378287 C 0 C 0 s aotNan1.NW_018494782v1 1535749 332 - 1813869 ATGAGAGCCTTGAGGGCCCGTTAAAAATGATCTCCATCTCCAGAGCCATCGCAGAATATGCCCATACCTGTGTTTAAGTGAACCTCAAGCTGTC-TGCTGCCTCCGCGGCCCCACGCTGCGA--CTGTTGCACCCCCATTCTGGGAGCTCAGTGACGGTGCCGACTTCGTGCACCTGCAGCCCT-GGAGT-GAGCCTGCCATGTCTTCGCTGTCACACACATGGCAGTGTCACAAGCACAGCCATTGCTGTGAAATGCTACACAGCAGAGAGACCCATTCCAGCAGGGATGGGGCACGTCTCAGAAGCATAGCTCTCAGTGAGAAAGTT----AGAAGTAG i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10973424 2113 - 12073884 I e cebCap1.NW_016107695v1 1289596 248 - 2164891 I e dasNov3.JH569188 608462 495 + 760995 I e canFam3.chr1 56204890 2167 + 122678785 I e chlSab2.chr13 96715704 4 + 98384682 I a score=736499.000000 s hg38.chr6_KB021644v2_alt 138136 125 + 185823 GATATACCTCATAGCAAAAAGTTGTTTACATAAATCAATAA------ACACACTCACAATAAACAGCACTGCATACCCCACCTGTAAATATGCATCTCCGAGCACACATCTGAAATGCGCCGGGG--------GGGATA s panTro5.chr6 173594672 125 + 175400573 GATATACCTCATAGCAAAAAGTTGTTTATATAAATCAATAA------ACACACTCACAATAAAGAGCACTGCATACCCCACCTGTAAATATGCATCTCTGAGCACACATCTGAAACGCGCCGGGG--------GGGATA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171827827 124 + 173848474 GATATACCTCATAGCAAAAAGTTGTTTATATAAATCAATAA------ACACACTCACAATAAAGAGCACTGCATACCCCACCTGTAAATATGCATCTCCGAGCACACATCTGAAATGCGCC-GGG--------GGGATA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11511070 122 - 12463322 GATATACCTCATAGCAAAAAGTTGTTTATATAAATCAATAA--------ACACTCACAATAAACAGCACTGCATACCCCACCTGTAAATATGCATCTCCGAGCACACATCTGAAGTGCGCC-GGG--------GGGATA i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170366546 135 + 172585720 GATATACCCCATAGCACAAAGTTGTTTCTATAAATCAATAAATCAAAACACTCTCGCAATAAACAGCACTGGATCCCCCACCTGTAAATATGCATCTCCAAGCACACATCTGAAATGCGACGGGG----GAAAGGGATG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169111849 135 - 170955103 GATATACCCCATAGCACAAAGTTGTTTCTATAAATCAATAAATCAAAACACTCTCGCAATAAACAGCACTGGATCCCCCACCTGTAAATATGCATCTCCAAGCACACATCTGAAATGCGACGGGG----GAAAGGGATG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8398036 135 + 10161646 GATATACCCCATAGCACAAAGTTGTTTCTATAAATCAATAAATCAAAACACTCTCGCAATAAACAGCACTGGATCCCCCACCTGTAAATATGCATCTCCAAGCACACATCTGAAATGCGACGGGG----GAAAGGGATG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1429573 135 + 3144229 GATATACCCCATAGCACAAAGTTGTTTATATAAATCAATAAATCAAAACACTCTCGCAATAAACAGCACTGGATCCCCCACCTGTAAATATGCATCTCCAAGCACATATCTGAAATGCGCCGCGG----GAAAGGGATG i cerAty1.NW_012002071v1 C 0 C 0 s manLeu1.NW_012106474v1 8251936 135 - 10857215 GATATACCCCATAGCACAAAGTTGTTTCTATAAATCAATAAATCAAAACACTCTCGCAATAAACAGCACTGGATTCCCCACCTGTAAATATGCATCTCCAAGCACACATCTGAAATGCGCCGGGG----GAAAGGGATG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15641145 135 - 23502949 GATATACCCCATAGCACAAAGTTGTTTATATAAATCAATAAATCAAAACACTCTCGCAATAAACAGCACTGGATCCCCCACCTGTAAATATGCATCTCCAAGCACACATCTGAAATGCACCGGGG----GAAAGGGATG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169925127 139 + 171630274 GATATACCCCGTAGCACAAGATTGTTTATATAAATCAACAAATCAAAACACACTCACAATAAACAGCACTTCCTACCCCACCTGCAAATATGCATCTCCAAGCACCCATCTGAAATGCGCCTGGGTTGGGTGGGGAATG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1325997 139 - 2905041 gatagaccccatagcacaagattgtttatataaatcaacaaatcaaaacacactcacaaaaaacagcaCTTCCTACCCCACCTGTAAAAACGCATCTCCAAGCACCCATCTGAAATGCGCCCGGGTTGGGTGGGGAATG i saiBol1.JH378287 C 0 C 0 s aotNan1.NW_018494782v1 1536081 139 - 1813869 GATATGCCCCATAGCACAAGATTGTTTATATAAATCAACAAATCAAAACACGCTCACAGTAAACAGCACTTCATACCCCATCTGTAAATATGCCTCTCCAAGCACCCGTCTGAAACGTGCCCGGGTTGGGTGGGGAGTG i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10973424 2113 - 12073884 I e cebCap1.NW_016107695v1 1289596 248 - 2164891 I e dasNov3.JH569188 608462 495 + 760995 I e canFam3.chr1 56204890 2167 + 122678785 I e chlSab2.chr13 96715704 4 + 98384682 I e nomLeu3.chr3 156340444 251 + 157873769 M a score=43043.000000 s hg38.chr6_KB021644v2_alt 138261 5 + 185823 AGTGA s panTro5.chr6 173594797 5 + 175400573 AGTGA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171827951 5 + 173848474 AGTGA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11511192 5 - 12463322 AGTGA i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170366681 5 + 172585720 AGTGA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169111984 5 - 170955103 AGTGA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8398171 5 + 10161646 AGTGA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1429708 5 + 3144229 AGTGA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96715708 5 + 98384682 AGTGA i chlSab2.chr13 I 4 C 0 s manLeu1.NW_012106474v1 8252071 5 - 10857215 AGTGA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15641280 5 - 23502949 AGTGA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169925266 5 + 171630274 AGTGA i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1326136 5 - 2905041 AGTGA i saiBol1.JH378287 C 0 C 0 s aotNan1.NW_018494782v1 1536220 5 - 1813869 AGTGA i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10973424 2113 - 12073884 I e cebCap1.NW_016107695v1 1289596 248 - 2164891 I e dasNov3.JH569188 608462 495 + 760995 I e canFam3.chr1 56204890 2167 + 122678785 I e nomLeu3.chr3 156340444 251 + 157873769 M a score=194528.000000 s hg38.chr6_KB021644v2_alt 138266 34 + 185823 ATGGGACGAGAAGTGGG-GTGGGGGCAGGCACAGA- s panTro5.chr6 173594802 34 + 175400573 ATGGGACGAGAAGTGGG-GTGGGGGCAGGCACAGA- i panTro5.chr6 C 0 C 0 s panPan2.chr6 171827956 34 + 173848474 ATGGGACGAGAAGTGGG-GTGGGGGCAGGCACAGA- i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11511197 34 - 12463322 ATGGGACAAGAAGTGGG-GTGGGGGCAGGCACAGA- i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170366686 34 + 172585720 ATGGGACAGGAAGTGGG-GTGGGAGAAGCCACAGG- i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169111989 34 - 170955103 ATGGGACAGGAAGTGGG-GTGGGGGAAGCCACAGG- i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8398176 34 + 10161646 ATGGGACAGGAAGTGGG-GTGGGGGAAGCCACAGG- i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1429713 34 + 3144229 ATAGGACAGGAAGTGGT-GTGGGGGAAGCCACAGG- i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96715713 34 + 98384682 ATGGGACAGGAAGTGGG-GTGGGGGAAGCCACAGG- i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8252076 34 - 10857215 ATAGGACAGGAAGTGGT-GTGGGGGAAGCCATAGG- i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15641285 34 - 23502949 ATGGGACAGGAAGTGGG-GCGGGCGAAGCCACAGG- i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169925271 30 + 171630274 ATGGGACAGAGAGTGGG---AGGAGCAACCAC--A- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1326141 32 - 2905041 ATGGGACAGAGAGTGGG---AGGAGCAGCCACAGA- i saiBol1.JH378287 C 0 C 0 s aotNan1.NW_018494782v1 1536225 32 - 1813869 ATGGGACAGAGAGTGGG---AGGAGCAGCCACAGA- i aotNan1.NW_018494782v1 C 0 C 0 s dasNov3.JH569188 608957 36 + 760995 ATGCAATGAGCAAAGGGAGTGGAAACTAGCAGTGAA i dasNov3.JH569188 I 495 C 0 e otoGar3.GL873575 10973424 2113 - 12073884 I e cebCap1.NW_016107695v1 1289596 248 - 2164891 I e canFam3.chr1 56204890 2167 + 122678785 I e nomLeu3.chr3 156340444 251 + 157873769 M a score=3314234.000000 s hg38.chr6_KB021644v2_alt 138300 417 + 185823 GAGGAGACTA--AAGACAGAACAGGAGCTAACCAGGGGCCGTGGTAAGGGAGCAGGGCCAGCGTCACCTCCTGCACCCGGGGCCTACAATGCCCTCACTCACTGGGAGGAACTGCA----TGTTGCAGGGAAAGTTGAGTTCCTCTGTG--AAATAACTCGCTTCCATTAGAAGGTATTAAAGGTCCTCAGACTGGAACCTTCCT--CAGCAAGCGGCAGTATACACAGGTAAGCACTTTTGTATT-----TTCTAAATAAACTAACAAAATGAACTCT-----AAATGGAGCCATTCCTCTC-GGGGGAAAATGCCCCATTCTTAATAGCTTGACTTTTCGGCTGTTTCATTTTGATGGTTTATAATTCAGTTAAACACATGTCCTGTCATACTGGGTTATGGCCGGG----GATGTGAAGGTAATTTTCACTGGGTCCTT s panTro5.chr6 173594836 417 + 175400573 GAGGAGACTA--AAGACAGAACAGGAGCTAACCAGGGGCCGTGGTAGGGGAGCAGGGCCAGCGTCACCTCCTGCACCCGGGGCCTACAATGCCCTCACTCACTGGGAGGAACTGCA----TGTTGCAGGGAAAGTTGAGTTCCTCTATG--AAATAACTCGCTTCCATTAGAAGGTATTAAAGGTCCTCAGACTGGAACCTTCCT--CAGCAAGCGGCAGTATACACAGGTAAGCACTTTTGTATT-----TTCTAAATAAACTAACAAAATGAACTCT-----AAATGGAGCCATTCCTCTC-GGGGGAAAATGCCCCATTCTTAATAGATTGACTTTTCGGCTGTTTCATTTTGAGGGTTTATAATTCAGTTGAACACATGTCCTGTCATACTGGGTTATGGCCGGG----GATGTGAAGGTAATTTTCACTGGGCCCTT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171827990 417 + 173848474 GAGGAGACTA--AAGACAGAACAGGAGCTAACCAGGGGCCGTGGTAGGGGAGCAGGGCCAGCGTCACCTCCTGCACCCGGGGCCTACAATGCCCTCACTCACTGGGAGGAACTGCA----TGTTGCAGGGAAAGTTGAGTTCCTCTATG--AAATAACTCGCTTCCATTAGAAGGTATTAAAGGTCCTCAGACTGGAACCTTCCT--CAGCAAGCGGCAGTATACACAGGTAAGCACTTTTGTATT-----TTCTAAATAAACTAACAAAATGAACTCT-----AAATGGAGCCATTCCTCTC-GGGGGAAAATGCCCCATTCTTAATAGCTTGACTTTCCGGCTGTTTCATTTTGAGGGTTTATAATTCAGTTGAACACATGTCCTGTCATACTGGGTTATGGCCGGG----GATGTGAAGGTAATTTTCACTGGGCCCTT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11511231 417 - 12463322 GAGGAGACTA--AAGACAGAACAGGAGCTAACCAGGGGCCGTGGTAGGGGAGCAGGGCCAGCGTCACCTCCTGCACCTGGGGCCTACCATGCCCTCACTCACCGGGAGGAACTGCG----TGTTGCAGGGAAAGTTGAGTTCCTCTATG--AAATAACTCGCTTCCATTAGAAGGTATTAAAGGTCCTCAGACTGGAACCTTCCT--CAGCAAGCGGCAGTATACACAGGTAAGCAATTTTGTATT-----TTCTAAATAAACTAACAAAATGAATTCT-----AAATGGAGCCATTCCTCTC-GGGGGAAAATGCCCCATTCTTAATAGCTTGACTTTTCGGCTGTTTCATTTTGATGGTTTATAATTCAGTTGAACACATGTCCTGTCATACTGGGTTATGGCCGGG----GATGTGAAGGTAATTTTCACTCGGCCCTT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156340696 409 + 157873769 GAGGAGATT---AAGACAG-ACAGGAGT--ACC-GGGGCCGTGGTA-GGGAGCAGGGCCAGCGTCACCTCCTGCACCCGGGGCCTGCAGCGCCCCCACTCACCGGGAGGAACTGTG----TGTTGCAGGGAAAGTTGAGTTCCTCTATG--AAATAACTCACTTCCATTAGAAGGTATTAAAGGTCCTCAGATTGGAACCTTCCT--CAGCAAGCAGCAGTATACACAAGTAAGCACTTTTGTATT-----TTCTAAATAAACTAACAAAACGAACTCT-----AAATGGAGCCATTCCTCTC--GGGGAAAATGCCCCGTTCTTAATAGCTTGACTTTTTAGCTGTTTCATTTTGATGGTTTATAATTCAGTTGAACACATGTCCTGTCATATTGGGTTATGGCC-GG----GATGTGAAGGTAGTTTTCACTGGGTCCTT i nomLeu3.chr3 M 251 C 0 s rheMac8.chr4 170366720 417 + 172585720 GAGGAGATTA--GAGACAGAACAGGAGCTAACCATGGGCTGTGGTAGGGGAGCAGGGCCAGGGTCTCCTCCTGCACCCGGGGCCTGCAGCACCCCCACTGACTGGGAGGAACGGCG----TGTGGCAGGGAAAGTTCAGTTCCTCTATG--AGATAACTCGCTTCCATTAGAAAGGATCTAAGGTCCCCAGATTGGAACCTTCCC--CAGCAAGTGGCAGTATACACAGGTAAGCACTTTTGTATT-----TTCTAAATAAACTAACAAAACAAGCTGT-----AAATGGAGATATTGTTCTCAGGGGGAAAATGCCCCATTCTTAATAGCTTGACTTT-TGGCTGTTCCATTTTGATGGTTTATAATTCAGTTGAAAACATGTCTTGTCATATTGGGTTATGGCCAGG----GATGGGAAGGTAATTTTCACTGGGTCCTT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169112023 417 - 170955103 GAGGAGATTA--GAGACAGAACAGGAGCTAACCATGGGCTGTGGTAGGGGAGCAGGGCCAGGGTCTCCTCCTGCACCCGGGGCCTGCAGCACCCCCACTGACTGGGAGGAACGGCG----TGTGGCAGGGAAAGTTCAGTTCCTCTATG--AGATAACTCGCTTCCATTAGAAAGGATCTAAGGTCTCCAGATTGGAACCTTCCC--CAGCAAGCGGCAGTATACACAGGTAAGCACTTTTGTATT-----TTCTAAATAAACTAACAAGACAAGCTGT-----AAATGGAGATATTGTTCTCAGGGGGAAAATGCCCCATTCTTAATAGCTTGACTTT-TGGCTGTTCCATTTTGATGGTTTATAATTCAGTTGAAAACATGTCCTGTCATATTGGGTTATGGCCAGG----GATGGGAAGGTAATTTTCACTGGGTCCTC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8398210 417 + 10161646 GAGGAGATTA--GAGACAGAACAGGAGCTAACCATGGGCTGTGGTAGGGGAGCAGGGCCAGGGTCTCCTCCTGCACCCGGGGCCTGCAGCACCCCCACTGACTGGGAGGAACGGCG----TGTGGCAGGGAAAGTTCAGTTCCTCTATG--AGATAACTCGCTTCCATTAGAAAGGATCTAAGGTCTCCAGATTGGAACCTTCCC--CAGCAAGCGGCAGTATACACAGGTAAGCACTTTTGTATT-----TTCTAAATAAACTAACAAAACAAGCTGT-----AAATGGAGATATTGTTCTCAGGGGGAAAATGCCCCATTCTTAATAGCTTGACTTT-TGGCTGTTCCATTTTGATGGTTTATAATTCAGTTGAAAACATGTCCTGTCATATTGGGTTATGGCCAGG----GATGGGAAGGTAATTTTCACTGGGTCCTC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1429747 417 + 3144229 GAGGAGATTA--GAGACAGAACAGGAGCTAACCATGGGCTGTGGTAGGGGAGCAGGGCCTGGGTCTCCTCCTGCACCCGGGGCCTGCAGCACCCCCACTGACTGGGAGGAATGGCG----TGTGGCAGGGAAAGTTCAGTTCCTCTATG--AGATAACTCGCTTCCATTAGAAAGGATCTAAAGTCTCCAGATTGGAACCTTCCC--CAGCAAGCGGCAGTATACACAGGTAAGCACTTTTGTATT-----TTCTAAATAAACTAACAAAACAAGCTGT-----AAATGGAGATATTGTTCTCAGGGGGAAAATGCCCCATTTTTAATAGCTTGACTTT-CGGCTGTTCCATTTTGATGGTTTATAATTCAGTTGAAAACATGTCCTGTCATATTGGGTTATGGCCAGG----GATGGGAAGGTAATTTTCACTGGGTCCTC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96715747 412 + 98384682 GAGGAGATCA--GAGACGGAACAGGAGCTAACCAGGGGCCGTGGTAGGGGAGCAGGGCCAGGGTTGCCTCCTGCACCCGGGGCCTGCAGCACCCCCACTGACTGGGAGGAATGGCG----TGTGGCAGGGAAAGTTCAGTTCCTCTATG--AGATAACTCGTTTCCATTAGAAAGGATCTGAGGTCCCCAGATTGGAACCTTCCC--CAGCAAGCGGCAGCATACACAGGTAAGCACTTTTGTATT-----TTCTAAATAAACTAGCAAAACAAGCTGT-----AAATGGAGATATTGTTCTCAGGGGGAAAATGCCCCATTCTTAATAGTTTGACTTC-CGGCTGTTCCATTTTGATGGTTTATAATTCAGTTGAAAACACGTCCTGTCATATTGGGTTATGGCCAGG----GATGTG-----AATTTTCACTGGGTCCTT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8252110 417 - 10857215 GAGGAGATTA--GAGACAGAACAGGAGCTAACCATGGGCTGTGGTAGGGGAGCAGGGCCAGGGTCTCCTCCTGCACCCAGGGCCTGCAGCACCCCCACTGACTGGGAGGAACGGCG----TGTGGCAGGGAAAGTTCAGTTCCTCTATG--AGATAACTCGCTTCCATTAGAAAGGATCTAAGGTCTCCAGATTGGAACCTTCCC--CAGCAAGCGGCAGCATACACAGGTAAGCACTTTTGCATT-----TTCTAAATAAACTAACAAAACAAGCTGT-----AAATGGAGATATTGTTCTCAGGGGGAAAATGCCCCATTCTTAATAGCTTGACTTT-CAGCTGTTCCATTTTGATGGTTTATAATTCAGTTGAAAACATGTCCTGTCATATTGGGTTATGGCCAGG----GATGGGAAGGTAATTTTCACTGGGTCCTC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15641319 417 - 23502949 GAGGAGATTA--GAGACAGAACAGGAGCTAACCAGGGGCCGTGGTAGGGGAGCAGGGCCAGGGTCATCTCCTGCACCAGGGGCCTGCAGCACCCCCACTGACTGGGAAGAACGGCG----TGTGGCAGGGAAAGTTCAGTTCCTCTATG--AGATAACTCGCTTCCATTAGAAGAGATCTAAGGTCCCCAGATTGGAATCTTCCC--CAGCAAGCGGCAGTATACACGGGTAAGCACTTTTGTATT-----TTCTAAATAAACTAACAAAACAAGCTGT-----AAATGGAGATACTGTTCTCAGGGGGGAAATGCCCCATTCTTAATAGCTTGACTTT-CGACTGTTCCATTTTGATGGTTTATAATTCCGTTGAAAACATGTCCTGTCATATTGGGTTATGGCCAGG----GATGTGAAGGTGATTTTCACTGGGTCCTC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169925301 416 + 171630274 GAGGAGATCA--CAGACAGAACAGGAGCTCACCAGGGGCCGTGGCAGAGGAGCAGGGTCAGCGTCCCCTCCTGCACCCATGGCCTCCAGCGCCCCCATCTCCCGGGGGGAGCTGCA----TGTTTCAGGGAACGTTCGGTTCATTTGTG--AAATCACTCACTTCTGTTAG-AGGCATCCAAGGTCCCCAGACTGGAATGTTCCT--CAGCAAGGGGCAGCGTACACAGGTAAGCACTTTCGTATT-----TTCTAGATAAACTAACAGGGTGAGCTGT-----AAATGGAGGCGTTCTTCTC-AGGGGGAAAGGCCCCGTTCTTAAAAGCTTGACTTTTCAGCTGTTCCATTTTGAGACTTTGTAATTCGGTTGAGCACAGGTGCGGTCATACTGGGCTGTGGCTGGG----GATCTGAAGGTACTTTTCACTGGCTCATT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1326173 407 - 2905041 GAGGAGATCA--AAGACAGAACAGGAGCTAACCAGGGGCCACAGCAGAGGAGCAGGGTCAGCGTCCCCTCCTGCACCCACGGCCTGCAGCACCCCCACTTCCCGGGGGGAGCCGCA----TGTTTCGGGGAAAGTTCAGTTCATTTGTG--AAATAACTCACTTCTGTTAG-AGGCATCAAAGGTTCCCAGACTGGAATCTTCCT--CAGCAAGGGGCAGCGTACACAGGTAAGCA-----------------CTAGAT-AATTAACAAAGTGAGCTCT-----AAATGGAGGCATTCTTCTC-AGGGGAAAGTGCCCCATTCTTAAAAGCTTGACTTTTCAGTTGTTCCATTTGGAGGCTTTATAATTCAGTTGGACAGAGGTGCGGTCACACTGGGTTGTGGCTGGGGATTGATTTGAAGGTAATTTTCTCTGGCTCATT i saiBol1.JH378287 C 0 C 0 s aotNan1.NW_018494782v1 1536257 414 - 1813869 GAGGAGATCA--AAG--AGAACAGGAGCTGACCAGGGGCCGTGGCAGAGGAGCAGGGTCAGCGTCCCCTCCTGCACCCACGGCCTGCAGCGCCCCCACCTCCCGGGGGGAGCCGCA----TGTTTCGGGGAAAGTTCAGTTCATTCGTG--AAATAACTCACTTCTGTCAG-AGTCATCGAAAGTCCCAAGACTGGAATCTTCCT--CAGCAAGGGGCAGCGTACACAGGTAAGCGCCTTCGTATT-----TTCTAGATAAACTAACAAAGTGAGCTCT-----AAATGGAGGCATTCTTCTC-AGGGGAAAATGCCCCATTCTTAAAAGCTTGACTCTTCAGCTGTTCCATTTTGAGGCTTTAGAATTCAGTTGAACACAGGTGCGGTCATACTGGGTTGTGGCTGGG----GACCTGAAGGTCATTTTCACTGGCTCATT i aotNan1.NW_018494782v1 C 0 C 0 s dasNov3.JH569188 608993 433 + 760995 GAAGACATTAATAAGTAAAAACAATGGAAAGTAAGTGTAATAGACAGAGGTGTATGATTATCTTCATTTTCTGTACTTTAAGCCTGCAAC-CACCAGTCTGCTACTGCAAACTATGCTTATATATTTGGTAAAGTCCAGTATTTCTATACTAAGTACATTACGTTCATTAA-AAGTATGAAATTACCCCAAAGGAGTATCTTCCTTACAGCAAGTGGCACCGTAGGTAGACAAGGACATGTGTATTTTCTCTTCTAAACAG---AAAAAAATGTATGGTCTCAAAAATAATACAACTACCCTAAGGGAAAAAACACCTCATTATTAATAGATTTATTTTTCTAGTGTTCTACTTTGATAGTTCATAATTCAATTTCATTGATTTGTTGCTCAATTGTGCCATGGCTGGG----GATATTAAACCAATTTTGACTGAAGTCTT i dasNov3.JH569188 C 0 I 10924 e otoGar3.GL873575 10973424 2113 - 12073884 I e cebCap1.NW_016107695v1 1289596 248 - 2164891 I e canFam3.chr1 56204890 2167 + 122678785 I a score=1813839.000000 s hg38.chr6_KB021644v2_alt 138717 220 + 185823 GAGTTCCTCATGTTTTGAATCTAACA---GATGATCATGGAATATGGTTGTGACCATAAAATGAATAGAGAGCTACAGTCAAAGAATTAGCCTGACCATGCCTTTTCTTAGCGGTTAACTGTTGTGCAACAGAAAATGAC----TA-TTATTCAGTTAACAAACAAGGCC-TAAGTGGGGTGTGAGCTCTGCACATCAGGAAGCTCTGTATGAATTCTAAATGAGGACA s panTro5.chr6 173595253 220 + 175400573 GAGTTCCTCATGTTTTGAATCTAACA---GATGATCATGGAATACGGCTGTGACCATAAAATGAATAGAGAGCTACAGTCAAAGAATTAGCCTGATGACGCCTCTTCTTAGCGGTTAACTGTTGTGCAACAGAAGATGAC----TA-TTATTCAGTTAACAAACAAGGCC-TAAGTGGGGTGTGAGCTCTGCACATCAGGAAGCTCTGTATGAATTCTAAATGAGGACA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171828407 220 + 173848474 GAGTTCCTCATGTTTTGAATCTAACA---GATGATCATGGAATATGGCTGTGACCATAAAATGAATAGAGAGCTACAGTCAAAGAATTAGCCTGACGACGCCTCTTCTTAGCGGTTAACTGTTGTGCAACAGAAGATGAC----TA-TTATTCAGTTAACAAACAAGGCC-TAAGTGGGGTGTGAGCTCTGCACATCAGGAAGCTCTGTATGAATTCTAAATGAGGACA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11511648 220 - 12463322 GAGTTCCTCGTGTTTTGAATCTAACA---GATGATCATGGAATACGGCTGTGACCATAAGATGAATAGAGAGCTACAGTCAAAGAATTAGCCTGACGACGCCCCTTCTTAGCGGTTAAATGTTGTGCAACAGAGGGTGAC----TA-TTATTCAGTTAACAAACAAGGCC-TAAGTGGGGTGTGAGCTCTGCACATCAGGAAGCTCTGTGTGAATTCTAAATGAGGACA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156341105 220 + 157873769 GAGTTCCTCATGTTTTGAATCTAATA---GATTATCATGGAATATGGCTGTGACCATAAGATGAATAGAGAGCTACAGTCAAAGAATCAGCCTGATGACTGCTCTTCTTAGCAGTTAACTATTGTGCAACAGAAGATGAC----TC-TTATTCAGTTAACAAACAAGACC-TAAGCGGGGTGTGAGCTCTGCACATCAGGAAGCTCTGTATGAATTCTACGTGAGGACA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170367137 220 + 172585720 GAGTTCCTCATGTTTTGAATCTAACA---GATGATCATGGAATACAGATGTGACCATAAGATGAATAGAGAGCTACAGTCAAAGAATTAGCCTGACGACTCCTCTTCTTAGCAATTAACTATTGTGCAACAGAAAATGAC----TA-TTAGTCAGTTGACAAACGAGGCC-TAAGTGGAGTATGAGCTCTGCACATCAGGAAGCTCTGTATGAATTCTAAATGAGGACA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169112440 220 - 170955103 GAGTTCCTCATGTTTTGAATCTAACA---GATGATCATGGAATACAGATGTGACCATAAGATGAATAGAGAGCTACAGTCAAAGAATTAGCCTGACGACTCCTCTTCTTAGCAATTAACTATTGTGCAACAGAAAATGAC----TA-TTAGTCAGTTAACAAACGAGGCC-TAAGTGGAGTATGAGCTCTGCACATCAGGAAGCTCTGTATGAATTCTAAATGAGGACA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8398627 220 + 10161646 GAGTTCCTCATGTTTTGAATCTAACA---GATGATCATGGAATACAGATGTGACCATAAGATGAATAGAGAGCTACAGTCAAAGAATTAGCCTGACGACTCCTCTTCTTAGCAATTAACTATTGTGCAACAGAAAATGAC----TA-TTAGTCAGTTAACAAACGAGGCC-TAAGTGGAGTATGAGCTCTGCACATCAGGAAGCTCTGTATGAATTCTAAATGAGGACA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1430164 220 + 3144229 GAGTTCCTCATGTTTTGAATCTAACA---GATGATCATGGAATACAGATGTGACCATAAGATGAACAGAGAGCTATAGTCAAAGAATTAGCCTGACGACTCCTCTTCTTAGCAATTAACTATTGTGCAACAGAAAATGAC----TA-TTATTCAGTTAACAAACGAGGCC-TAAGTGGAGTATGAGCTCTGCACATCAGGAAGCTCTGTATGAATTCTAAATGAGGACA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96716159 220 + 98384682 GAGTTCCTCTTGTTTTGAATCTAACA---GAAGATCATGGAATACAGATGTGACCATAAGATGAATAGAGAGCTACAGTCAAAGAATTAGCCTGACGACTCCTCTTCTTAGCAATTAACTATTGTGCAACAGAAAATGAC----TA-TTATTCAGTTAACAAACAAGGCC-TAAGTGGAGTATGAGCTCTGCACATCAGGAAGCTCTGTATGAATTCTAAATGAGGACA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8252527 220 - 10857215 GAGTTCCTCATGTTTTGAATCTAACA---GATGATCATGGAATACAGATGTGACCATAAGATGAATAGAGAGCTACAGTCAAAGAATTAGCCTGACGACTCCTCTTCTTAGCAATTAACTATTGTGCCACAGAAAATGAC----TA-TTATTCAGTTAACGAACGAGGCC-TAAGTGGAGTATGAGCTCTGCACATCAGGAAGCTCTGTATGAATTCTAAATGAGGACA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15641736 220 - 23502949 GAGTTCCTCACGTTTTGAATCTAACA---GATGATCATGGAATACAGATGTGACTGTAAGATGAATAGAGAGCTACAGTCAAAGAATTAGCCTGACGACTCCTCTTCTTAGCAATTAACTATTGTGCAACAGAAAATGAC----TA-TTATTCAGTTAACAAACAAGGCC-TAAGTGGAGTATGAACTCTGCACATCAGGAAGCTCTGTATGAATTCCAAATGAGGACA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169925717 226 + 171630274 GGGTTCCTTGTGTTTTGAATCTAACAGTTGATGATCATGGAATAAGTC--TGCCCAT-AGATAAACTGGGAGCTACAGTCAGAGATTGAGCCTGACGACTCCTCTTCTTGGCAGTTAACTGTTGTGTAACAGAAGATGACGGGTTATTTATTCAGTTAGCAAACGGGGCCTTCAGTGGAGTGCGAGCTCTGGGCATTAGGAAGCTCTGTGTGAGTTCTACATGAGGACA i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1326580 225 - 2905041 GGGTTCCTCATGTTTTGAATCTAACAGATGATGATTATGGAATATGGCTGTGCCCATAAGATAAATTGGACGCTACAGTCAAAGATTTAGCCTGGAGACTCCTTTTCTTGGCAATTAACTATTGTGCAACAGAAAATGAC----TAGTTATTCAGTTAGCAAACAAGGCCTTCCGTAGAGTGTGAGCTCTGCACATTAGGATGCTCTGTGCGCATTCTAAATGAGGACA i saiBol1.JH378287 C 0 C 0 s aotNan1.NW_018494782v1 1536671 224 - 1813869 GGGTTCCTCATGTTTTGAATCTAACAGATGATGATTATGGAATGCGGCTGTGCCCAT-AGATAAATTGGGAGCTACAGTCAAAGATTTAGCCTGACGACTTCTCTTCTTGGCAATTAACTATTGTGCAACCAAAAATGAC----TAGTTACTCAGTTAGCAAACAAGGCCTTCAGTGGAGTGCGAGGTCTGCACGTTAGGAAGCTCTGTGTGAGTTCTAAATGAGGACA i aotNan1.NW_018494782v1 C 0 I 333 e otoGar3.GL873575 10973424 2113 - 12073884 I e cebCap1.NW_016107695v1 1289596 248 - 2164891 I e dasNov3.JH569188 609426 10924 + 760995 I e canFam3.chr1 56204890 2167 + 122678785 I a score=19932.000000 s hg38.chr6_KB021644v2_alt 138937 3 + 185823 AAT s panTro5.chr6 173595473 3 + 175400573 AAT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171828627 3 + 173848474 AAT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11511868 3 - 12463322 AAT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156341325 3 + 157873769 AAT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170367357 3 + 172585720 AAT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169112660 3 - 170955103 AAT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8398847 3 + 10161646 AAT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1430384 3 + 3144229 AAT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96716379 3 + 98384682 AAT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8252747 3 - 10857215 AAT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15641956 3 - 23502949 AAT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169925943 3 + 171630274 CAT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1326805 3 - 2905041 CAT i saiBol1.JH378287 C 0 I 203 e otoGar3.GL873575 10973424 2113 - 12073884 I e aotNan1.NW_018494782v1 1536895 333 - 1813869 I e cebCap1.NW_016107695v1 1289596 248 - 2164891 I e dasNov3.JH569188 609426 10924 + 760995 I e canFam3.chr1 56204890 2167 + 122678785 I a score=61154.000000 s hg38.chr6_KB021644v2_alt 138940 10 + 185823 GTGAATCTTT s panTro5.chr6 173595476 10 + 175400573 GTGAATCTTT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171828630 10 + 173848474 GTGAATCTTT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11511871 10 - 12463322 GTGAATCTTT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156341328 10 + 157873769 GTAAATCTTT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170367360 10 + 172585720 GTAAATCTTT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169112663 10 - 170955103 GTAAATCTTT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8398850 10 + 10161646 GTAAATCTTT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1430387 10 + 3144229 GTAAATCTTT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96716382 10 + 98384682 GTAAATCTTT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8252750 10 - 10857215 GTAAATCTTT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15641959 10 - 23502949 GTAAATCTTT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169925946 6 + 171630274 ----ACCttt i calJac3.chr4 C 0 C 0 e otoGar3.GL873575 10973424 2113 - 12073884 I e saiBol1.JH378287 1326808 203 - 2905041 I e aotNan1.NW_018494782v1 1536895 333 - 1813869 I e cebCap1.NW_016107695v1 1289596 248 - 2164891 I e dasNov3.JH569188 609426 10924 + 760995 I e canFam3.chr1 56204890 2167 + 122678785 I a score=6536.000000 s hg38.chr6_KB021644v2_alt 138950 2 + 185823 GT s panTro5.chr6 173595486 2 + 175400573 GT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171828640 2 + 173848474 GT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11511881 2 - 12463322 GT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156341338 2 + 157873769 GT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170367370 2 + 172585720 AT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169112673 2 - 170955103 AT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8398860 2 + 10161646 AT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1430397 2 + 3144229 AA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96716392 2 + 98384682 AT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8252760 2 - 10857215 AT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15641969 2 - 23502949 AT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169925952 2 + 171630274 gt i calJac3.chr4 C 0 I 221 s saiBol1.JH378287 1327011 2 - 2905041 gC i saiBol1.JH378287 I 203 C 0 e otoGar3.GL873575 10973424 2113 - 12073884 I e aotNan1.NW_018494782v1 1536895 333 - 1813869 I e cebCap1.NW_016107695v1 1289596 248 - 2164891 I e dasNov3.JH569188 609426 10924 + 760995 I e canFam3.chr1 56204890 2167 + 122678785 I a score=106838.000000 s hg38.chr6_KB021644v2_alt 138952 16 + 185823 AAAAATTATCATAAAC s panTro5.chr6 173595488 16 + 175400573 AAAAATTATCATAAGC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171828642 16 + 173848474 AAAAATTATCATAAGC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11511883 16 - 12463322 AAAAATTATCATAAAC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156341340 16 + 157873769 AAAAATTATCATAAAC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170367372 16 + 172585720 AAAAATTATCATAAAC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169112675 16 - 170955103 AAAAATTATCATAAAC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8398862 16 + 10161646 AAAAATTATCATAAAC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1430399 16 + 3144229 AAAAATTATCATAAAC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96716394 16 + 98384682 AAAAATTATCATAAAC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8252762 16 - 10857215 AAAAATTATCATAAAC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15641971 16 - 23502949 AAAAATTATCATAAAC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169926175 15 + 171630274 AGAAATTATGCTAAG- i calJac3.chr4 I 221 C 0 s saiBol1.JH378287 1327013 15 - 2905041 AAAAATTATAATAAG- i saiBol1.JH378287 C 0 C 0 e otoGar3.GL873575 10973424 2113 - 12073884 I e aotNan1.NW_018494782v1 1536895 333 - 1813869 I e cebCap1.NW_016107695v1 1289596 248 - 2164891 I e dasNov3.JH569188 609426 10924 + 760995 I e canFam3.chr1 56204890 2167 + 122678785 I a score=886959.000000 s hg38.chr6_KB021644v2_alt 138968 122 + 185823 AATTTGGGCTCATAATACAACTACACATTATGAATGAACACTAAGTATTTAAACTTTTGTTAAGAAAATTTTT---ATTCGTTAAGAAATGAAGGTAATGGACAGTGATCAGTAATACCATCTGA s panTro5.chr6 173595504 122 + 175400573 AATTTGGGCTCATAATACAACTACACATTATGAATGAACACTAAGTATTTAAACTTTTGTTAAGAAAATTTTT---ATTCGTTAAGAAATGAAGGTAATGGACAGTGATCAGTAATACCATCTGA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171828658 122 + 173848474 AATTTGGGCTCATAATACAACTACACATTATGAATGAACACTAAGTATTTAAACTTTTGTTAAGAAAATTTTT---ATTCGTTAAGAAATGAAGGTAATGGACAGTGATCAGTAATACCATCTGA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11511899 122 - 12463322 AATTTGGGCTCATAATACAACTACACATTATGAATGAACACTAAGTATTTAAACTTTTGTTAAGAAAATTTTT---ATTCGTTAAGAAATGAAGGTAATGGACAGTGATCAGTAATACCATCTGA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156341356 122 + 157873769 AATTGGGGCTCATAGTACAACTACATCTTATGAATGAACGCTAAGTGTTTAAACTTTTGTTAAGGAAATTTTT---ATTCATTAAGAAATGAAGGTAATGGACAGTAATCAGTAACACTATCTGA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170367388 125 + 172585720 AATTTGGGTTCATAATACAACTATACATTATGAATGAATACTAAGTATTTCAACTTTTGTTAAGAAACTTTTTATCATCCATTAAGAAATGAAGGTAATAGACAATGATCAATAATAATATCCGA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169112691 125 - 170955103 AATTTGGGTTCATAATACAACTATACATTATGAATGAATACTAAGTATTTCAACTTTTGTTAAGAAACTTTTTATCATCCATTAAGAAATGAAGGTAATAGACAATGATCAATAATAATATCCGA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8398878 125 + 10161646 AATTTGGGTTCATAATACAACTATACATTATGAATGAATACTAAGTATTTCAACTTTTGTTAAAAAACTTTTTATCATCCATTAAGAAATGAAGGTAATAGACAATGATCAATAATAATATCCGA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1430415 125 + 3144229 AATTTGGGTTCATAATACAACTATACATTATGAATGAATACTAAGTATTTCAACTTTTGTTAAGAAACTTTTTATCATCCATTAAGAAATGAAGGTAATAGACAGTGATCAATACTAATATCCGA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96716410 125 + 98384682 AATTTGGGCTCATAATACAACTATACATTATGAATGAATACTAAGTATTTAAACTTTTGTTAAGAAAATTTTTATCATCCATTAAGAAATGAAGGTAATGGATAGTGATCAATAATACTATCTGA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8252778 125 - 10857215 AATTTGGGTTCACAATATAACTATACATTATGAATGAATACTAAGTATTTCAACTTTTGTTAAGAAACTTTTTATCATCCATTAAGAAATGAAGGTAATAGACAGTGATCAATACTAATATCCGA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15641987 124 - 23502949 AATTTGGGTTCGTAATACAACTATACATTATGAATGAATACTAAGTATTTAAA-TTTTGTTAAGAAAATTTTTATCATCCATTAAGAAATGAAGGTAATGGACAGTGATCAATAATACTATCTGA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169926190 112 + 171630274 ---TTAGGCTCAAAATACAACTACACATTATGCATGAACACTAAATATTTACTCTTTCATTAAGAAACGTCTTATCATTCATTAAGAAATG-AGGTGGTGGACGGTCATCTGTAGA--------- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1327028 112 - 2905041 ---TTAGGCTCATAATACAACTACACATTATGCATGAGCACTAAATATTTAATCTTTCATTAAGAAACATTTTATCATTCGTTAAGAAATG-AGGTGATGGACAGTGATCAGTAGA--------- i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1289844 115 - 2164891 AATTTAGACTCATAATACAACTACACGTTATGCATGAACACTAAATATTTAATCTTTCATTAAGAAACGTTTTATCATTCGTTAAGAAATG-AGGTGATGGACAGTGGTCAGTAGA--------- i cebCap1.NW_016107695v1 I 248 C 0 e otoGar3.GL873575 10973424 2113 - 12073884 I e aotNan1.NW_018494782v1 1536895 333 - 1813869 I e dasNov3.JH569188 609426 10924 + 760995 I e canFam3.chr1 56204890 2167 + 122678785 I a score=764047.000000 s hg38.chr6_KB021644v2_alt 139090 77 + 185823 TAATGAGGTCAGCCTCATGCTAGCTTCTGTATTCTGGGCTAGCCTAAGGCAGACGTGTGATCACCTCACATTTCTTT s panTro5.chr6 173595626 77 + 175400573 TAATGAGGTCAGCCGCATGCTAGCTTTTGTATTCTGGGCTAGCCTAAGGCAGACGTGTGATCACCTCGCATTTCTTT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171828780 77 + 173848474 TAATGAGGTCAGCCGCATGCTAGCTTTTGTATTCTGGGCTAGCCTAAGGCAGACGTGTGATCACCTCGCATTTCTTT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11512021 77 - 12463322 TAATGAGGTCAGCCTCATGCTAGCTTTTGTATTCTGGGCTAGCCTAAGGCAGACGTGTGATCACCTGGCATTTCTTT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156341478 77 + 157873769 CAATGAGGTCAGCCTCCTGCTAGCTTTTGTATTCTGGGCTAGCCTAAGGCAGACGTGTGATCATCTTGCATTTCTTT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170367513 77 + 172585720 TAACGAGGTCAGCCTCATGCTTGCTTTTGTATTCTGGGCTAGCCTAAGGCAGACGTGTAATCACCTTGCATTTCTTT i rheMac8.chr4 C 0 I 24 s macFas5.chr4 169112816 77 - 170955103 TAACGAGGTCAGCCTCATGCTTGCTTTTGTATTCTGGGCTAGCCTAAGGCAGACGTGTAATCACCTTGCATTTCTTT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8399003 77 + 10161646 TAACGAGGTCAGCTTCATGCTTGCTTTTGTATTCTGGGCTAGCCTAAGGCAGACGTGTAATCACCTTGCATTTCTTT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1430540 77 + 3144229 TAACGAAGTCAGCCTCATGCTTGCTTTGGTATTCTGGGCTAGCCTAAGGCAGACGTGTAATCACCTTGCATTTCTTT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96716535 77 + 98384682 TAATGAGGTCAGTCTCATGCTTGCTTTTGTATTCTGGGCTAGCCTAAGGCAGACGTGTAATCACCTTGCATTTCTTT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8252903 77 - 10857215 TAATGAAGTCAGCCTCATGCTTGCTTTGGTATTCTGGGCTAGCCTAAGGCAGACGTGTAATCACCTTGCATTTCTTT i manLeu1.NW_012106474v1 C 0 I 24 s colAng1.NW_012114488v1 15642111 77 - 23502949 TAATGAGGTCAGCCTCATGCTTGCTTTTGTATTCTGGGCTAGCCTAAGGCAGACGTGTAATCAccttgcatttcttt i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169926302 77 + 171630274 TAACGGGGTCAGCCTCAAGCTGGCTTTTGCATTCTGGGCTAGCCTGAGGCAGACGCGTGATCACCTTGCATTTCTTC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1327140 72 - 2905041 TGATGAGGTCAGCCTCATGCTAGCTTTTGCATTCTGGGCTAGCCTGAGGCAGACATGTGA-----TTGCATTTCTTT i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1289959 77 - 2164891 TAATGAGGTCAGCCTCATGCTGGCTTTTGTATTCTGGGCTAGCCTCAGGCAGACGTGTGATCACCTTGCATTTCTTT i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1537228 77 - 1813869 TAATGAGGTCAGCCTCATGCTGGCTTTTGCATTCTGGGCTAGCCTAAGGCACACGCGTGATCACCTTGCATTGCTTT i aotNan1.NW_018494782v1 I 333 C 0 e otoGar3.GL873575 10973424 2113 - 12073884 I e dasNov3.JH569188 609426 10924 + 760995 I e canFam3.chr1 56204890 2167 + 122678785 I a score=48757.000000 s hg38.chr6_KB021644v2_alt 139167 10 + 185823 CCGTTGCTTT s panTro5.chr6 173595703 10 + 175400573 CCGTTGCTTT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171828857 10 + 173848474 CCGTTGCTTT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11512098 10 - 12463322 CCGTTGCTTT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156341555 10 + 157873769 CCGTTGCTGT i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169112893 7 - 170955103 ---TTGTTTT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8399080 7 + 10161646 ---TTGTTTT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1430617 10 + 3144229 TCTTTGTTTT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96716612 10 + 98384682 TCTCTGTTTT i chlSab2.chr13 C 0 I 17 s colAng1.NW_012114488v1 15642188 10 - 23502949 tctttatttt i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169926379 10 + 171630274 CCATTGCTTT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1327212 10 - 2905041 CCATTGCTTT i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1290036 10 - 2164891 CCATTGCTTT i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1537305 10 - 1813869 GCGTGGCTTT i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10973424 2113 - 12073884 I e dasNov3.JH569188 609426 10924 + 760995 I e canFam3.chr1 56204890 2167 + 122678785 I e manLeu1.NW_012106474v1 8252980 24 - 10857215 I e rheMac8.chr4 170367590 24 + 172585720 I a score=46275.000000 s hg38.chr6_KB021644v2_alt 139177 17 + 185823 ACCCGGCCTCGCCTAGG s panTro5.chr6 173595713 17 + 175400573 ACCCGGCCTCGCCTAGG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171828867 17 + 173848474 ACCCGGCCTCGCCTAGG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11512108 17 - 12463322 ACCCGGCCTCGCCTAGG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156341565 17 + 157873769 ATCCAGCCTCGCCTAGG i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169112900 16 - 170955103 -TCGGGCCTTTTCTAGG i macFas5.chr4 C 0 I 1 s macNem1.NW_012011000v1 8399087 16 + 10161646 -TCCGGCCTTTTCTAGG i macNem1.NW_012011000v1 C 0 I 1 s cerAty1.NW_012002071v1 1430627 16 + 3144229 -TCAGGCCTTTTCTAGG i cerAty1.NW_012002071v1 C 0 I 1 s colAng1.NW_012114488v1 15642198 16 - 23502949 -tcgggccttttctagg i colAng1.NW_012114488v1 C 0 I 1 s calJac3.chr4 169926389 13 + 171630274 --ACCACCT--CTGAGG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1327222 15 - 2905041 --ACCACCTCGCCAAGG i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1290046 15 - 2164891 --ACCGCCTCACCAAGG i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1537315 15 - 1813869 --ACCGCCTCACCGAGG i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10973424 2113 - 12073884 I e dasNov3.JH569188 609426 10924 + 760995 I e canFam3.chr1 56204890 2167 + 122678785 I e chlSab2.chr13 96716622 17 + 98384682 I e manLeu1.NW_012106474v1 8252980 24 - 10857215 I e rheMac8.chr4 170367590 24 + 172585720 I a score=1953796.000000 s hg38.chr6_KB021644v2_alt 139194 211 + 185823 -TTCCCCTC-CTTTCCTCCTGTGTGCCTCCCCTGCTGCCTACACCCAGCCTTGACTCTGCTGCTTCTCCCCTCCC-AAGGCTGAGGGACCCTGACCACAATCATGCCTCAGACTCTGGGCTACCCTTTTTTC-CTCTCTGTCTTGGATTTTATTTTCTGCTTTCTAAAGTGTCATCATCATGCA---CTTTTT--CTGAGGTCATACTTTTCTGGTGTCT s panTro5.chr6 173595730 213 + 175400573 -TTCCCCTC-CTTTCCTCCTGTGTGCCTCCCCTGCTGCCCACACCCAGCCTTGACTCTGCTGCTTCTCTCCTCCC-AAGGCTGAGGGACCCTGACCACAATCATGCCTCAGACTCTGGGCTACCCTTTTTTC-CTCTCTGTCTTGGATTTTATTTTCTGCTTTCTAAAGTGTCATCATCATGCATT-TTTTTT--CTGAGGTCATACTTTTCTGGTGTCT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171828884 213 + 173848474 -TTCCCCTC-CTTTCCTCCTGTGTGCCTCCCCTGCTGCCCACACCCAGCCTTGACTCTGCTGCTTCTCCCCTCCC-AAGGCTGAGGGACCCTGACCACAATCATGCCTCAGACTCTGGGCTACCCTTTTTTC-CTCTCTGTCTTGGATTTTATTTTCTGCTTTCTAAAGTGTCATCATCATGCATT-TTTTTT--CTGAGGTCATACTTTTCTGGTGTCT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11512125 213 - 12463322 -TTCCCCTC-CTTTCCTCCTGTGTGCCTCCCCTGCTGCCCACACCCAGCCTTGACTCTGCTGCTTCTCCCCTCCC-AAGGCTGAGGAACCCTCACCACAATCATGCCTCAGACTCTGGGCTACCCTTTTTTC-CTCTCTGTCTTGGATTTTATTTTCTGCTTTCTAAAGTGTCATCGCCATGCATT-TTTTTT--CTGAGGTCATACTTTTCTGGTGTCT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156341582 212 + 157873769 -TTCCCCTC-CTTTCCTCCTGTGTGCCTCCCCTGCTGCCCACACCCAGCCTTGACTCTGCTGCCTCTCCCCTCCC-AAGGCTGAGGGACCCTGACCACAATCCTGCCTCAGACTCTGGGCTACCCTTTTTTC-CTCTCTGTCTTGGATTTTATTTTCTGCTTTCTAAAGTGTCATCATCATGCA-T-TTTTTT--CTGAGGTCATACTTTCCTGGTGTCT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170367614 212 + 172585720 -TTCCCTTC-CTTTCCTCCTGTGTG-CTCCCCTGCTGCCCATTCCCAGCATTGACTCTGCTGCCTCTCCCCTCCC-AAGGCTGAGGGACCCTGACCGCAATCATGTCTCAGACTCTGGGCTGCCCTTTTTCCTCTCTCTGTCTTGGATTTTATTTTCTGCTTTCTAAAGTGTCATCATCGTGCA-T-TTTTTT--CTGAGGTCATACTTTTCTGGTGTCT i rheMac8.chr4 I 24 C 0 s macFas5.chr4 169112917 212 - 170955103 -TTCCCTTC-CTTTCCTCCTGTGTG-CTCCCCTGCTGCCCATACCCAGCATTGACTCTGCTGCCTCTCCCCTCCC-AAGGCTGAGGGACCCTGACCGCAATCATGTCTCAGACTCTGGGCTGCCCTTTTTCCTCTCTCTGTCTTGGATTTTATTTTCTGCTTTCTAAAGTGTCATCATTGTGCA-T-TTTTTT--CTGAGGTTATGCTTTTCTGGTGTCT i macFas5.chr4 I 1 C 0 s macNem1.NW_012011000v1 8399104 212 + 10161646 -TTCCCTTC-CTTTCCTCCTGTGTG-CTCCCCTGCTGCCCATACCCAGCATTGACTCTGCTGCCTCTCCCCTCCC-AAGGCTGAGGGACCCTGACCGCAATCATGTCTCAGACTCTGGGCTGCCCTTTTTCCTCTCTCTGTCTTGGATTTTATTTTCTGCTTTCTAAAGTGTCATCATCGTGCA-T-TTTTTT--CTGAGGTCATACTTTTCTGGTGTCT i macNem1.NW_012011000v1 I 1 C 0 s cerAty1.NW_012002071v1 1430644 212 + 3144229 -TTCCCTTC-CTTTCCCCCTGTGTG-CTCCCCTGCTGCCCATACCCAGCATTGACTCTGCTGCCTCTCCCCTCCC-AAGGCTGAGGGACCCTGACCGCAATCATGTCTCAGACTCTGGGCTACCCTTTTTCCTCTCTCTGTCTTGGATTTTATTTTCTGCTTTCTAAAGTGTCATCATCATGCA-T-TTTTTT--CTGAGGTCATACTTTTCTGGTGCCT i cerAty1.NW_012002071v1 I 1 C 0 s chlSab2.chr13 96716639 211 + 98384682 -TTCCCTTC-CTTTCCTCCTATGTG--TCCCCTGCTGCCCATACCCAGCATTGACTCTGCTGCCTCTCCCCTCCC-AAGGCTGAGGGACCCTGACTGCAATCATGTCTCAGACTCTGGGCTACCCTTTTTCCTCTCTCTGTCTTGGATTTTATTTTCTGCTTTCTAAAGTGTCATCATCATGCA-T-TTTTTT--CTGAGGTCATACTTTTCTGGTGTCT i chlSab2.chr13 I 17 C 0 s manLeu1.NW_012106474v1 8253004 212 - 10857215 -TTCCCTTC-CTTTCCCCCTGTGTG-CTCCCCTGCTGCCCATACCCAGCATTGACTCTGCTGCCTCTCCCCTCCC-AAGGCTGAGGGACCCTGACCGCAATCATGTCTCAGACTCTGGGCTACCCTTTTTCCTCTCTCTGTCTTGGATTTTATTTTCTGCTTTCTAAAGTGTCATCATCATGCA-T-TTTTTT--CTGAGGTCATACTTTTCTGGTGCCT i manLeu1.NW_012106474v1 I 24 C 0 s colAng1.NW_012114488v1 15642215 211 - 23502949 -ttcctttc-ctttcctCCTGTGTG-CTCCCCTGCTGCCCATACCCAGCATTGACTCTGCTGCCTCTCCCCTCCCGGAGGCTGAGGGACCCTGACCGCAATCATGTCTCAGACTCTGGGCTACCCTTTTTC--CTCTCTGTCTCGGATTTTATTTTCTGCTTTCTAAAGTGTCATCATCATGTA-T-TTTTTT--CTGAGGTCATACTTTTCTGGTGTCT i colAng1.NW_012114488v1 I 1 C 0 s calJac3.chr4 169926402 211 + 171630274 TTCTCCCCCTCTTGCCTCCTGTGGG-CCTCCCCGAGGCTCACACCCAGCCTCCACTCAGCTGCCTCTCCCCTCCC-AAGGCTGAGGGAGCCTGACCACAATCATGCCTCAGAATCTAGGTTACCCTTTTTTC-CTCTCTGTCTTGGATTTTATTTTCTGCTTTCTAAAGTGTC---GTCATGCA-TTTTTTTT--CTGAGGGCATACATTTCTGGTGTCT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1327237 215 - 2905041 GTCTCCCTC-CTTTCCTCCTGTGTG-CCTCCCCGCGGCTCGCACCCAGCCCCCACGCTGCTGCCCGTCCCCTCCC-AAGGCTGAGGGAGCCCGACCACAATCCTGCCTCAGACTCCAGGTTACCCTTTTCTC-CTCTCTGTCTTGGATTTTATTTTCTGCTTTCTAAAGTGTCATTGTCATGCA-TTTTTTTTTCCTGAGAGCACACATTTCTGGTGTCT i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1290061 207 - 2164891 TTCTCTCTC-CTTTCCTCCTGTGTG-CCTCCTCGCGGCTCACTCCCAGCCTCCACGCTGCTGCCTCTCCCCTCCA-AAGGCTGAGGGAGCCTGACCACAATCATGCCGCAGATTCTAGGTTACCCTTTTTTC-CTCTCTGTCTTGGATTTTATTTTCTGCTTTCTAAAGTGTCATTGTCA-------TTTTTT--CTGAGGGCATACATTTCTGGTGTCT i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1537330 209 - 1813869 ACCTTCCTC-C---CCTCCCATGTG-CCTCCCCGCGGCTCATGCCCAGCCTCCACTCTGCTGCCTCTCCCCTCCC-AAGGCTGAGGGAGCCTGACCACAATCGTGCCTCAGACTCTAGGTTACCCTTTCTTC-CTCTCTGTCTTGGATTTTATTTTCTGCTTTCTAAAGTGTCGTTGTCATGCG-T-TTTTTT--CTGAGGGCCTACATTTCTGGTGTCT i aotNan1.NW_018494782v1 C 0 I 734 e otoGar3.GL873575 10973424 2113 - 12073884 I e dasNov3.JH569188 609426 10924 + 760995 I e canFam3.chr1 56204890 2167 + 122678785 I a score=28665.000000 s hg38.chr6_KB021644v2_alt 139405 3 + 185823 AAT s panTro5.chr6 173595943 3 + 175400573 AAT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171829097 3 + 173848474 AAT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11512338 3 - 12463322 AAT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156341794 3 + 157873769 AAT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170367826 3 + 172585720 AAT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169113129 3 - 170955103 AAT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8399316 3 + 10161646 AAT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1430856 3 + 3144229 AAT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96716850 3 + 98384682 AAT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8253216 3 - 10857215 AAT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15642426 3 - 23502949 AAT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169926613 3 + 171630274 AAT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1327452 3 - 2905041 AAT i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1290268 3 - 2164891 AAT i cebCap1.NW_016107695v1 C 0 I 843 e otoGar3.GL873575 10973424 2113 - 12073884 I e aotNan1.NW_018494782v1 1537539 734 - 1813869 I e dasNov3.JH569188 609426 10924 + 760995 I e canFam3.chr1 56204890 2167 + 122678785 I a score=64518.000000 s hg38.chr6_KB021644v2_alt 139408 9 + 185823 GGAGAA-----GAT s panTro5.chr6 173595946 14 + 175400573 GGAGAAGAATTGAT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171829100 14 + 173848474 GGAGAAGAATTGAT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11512341 14 - 12463322 GGAGAAGAATTGAT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156341797 13 + 157873769 GGAGAA-GATGGAT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170367829 14 + 172585720 GGAGAAGAATTGAT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169113132 14 - 170955103 GGAGAAGAATTGAT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8399319 14 + 10161646 GGAGAAGAATTGAT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1430859 14 + 3144229 GGAGAAGAATTGAT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96716853 14 + 98384682 GGAGAAGAATTGAT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8253219 14 - 10857215 GGAGAAGAATTGAT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15642429 14 - 23502949 GGAGAAGAATTGAT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169926616 9 + 171630274 AGTGAAGAA----- i calJac3.chr4 C 0 I 492 s saiBol1.JH378287 1327455 9 - 2905041 AGTGAAGAA----- i saiBol1.JH378287 C 0 I 321 e otoGar3.GL873575 10973424 2113 - 12073884 I e aotNan1.NW_018494782v1 1537539 734 - 1813869 I e cebCap1.NW_016107695v1 1290271 843 - 2164891 I e dasNov3.JH569188 609426 10924 + 760995 I e canFam3.chr1 56204890 2167 + 122678785 I a score=1426324.000000 s hg38.chr6_KB021644v2_alt 139417 199 + 185823 AAAGATACTGAAGAAAACAGTATctaccaaattgggtactgtaagtc--------cattgctaaattaagaactttacatatattatctcatgattacctctatgggagaaaatattattcctgctttacaggtgagaaaactgagactcagagaagataagtcacttggccaaagacacacagtcagttaatataggagccaggaC s panTro5.chr6 173595960 199 + 175400573 AAAGATACTGAAGAAAACAGTATctaccaaattgggtactgtaagtc--------cattgctaaattaagaactttacatatattatctcatgattacctctatgggagaaaatattattcctactttacaggtgagaaaactgagactcagagaagataagtcacttggccaaagacacacagtcagttaatataggagccaggaC i panTro5.chr6 C 0 I 110 s panPan2.chr6 171829114 199 + 173848474 AAAGATACTGAAGAAAACAGTATctaccaaattgggtactgtaagtc--------cattgctaaattaagaactttacatatattatctcatgattacctctatgggagaaaatattattcctactttacaggtgagaaaactgagactcagagaagataagtcacttggccaaagacacacagtcagttaatataggagccaggaC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11512355 199 - 12463322 AAAGATACTGAAGAAaatagtatctaccaaattgggtactgtaagtc--------cattgctaaattaagaactttacatatattatctcatgattacctctatgggagaaaatattattcctgctttacaggtgagaaaactgagactcagagaaaataagtcacttggccaaagacacacagtcagttaatataggagccaggaC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156341810 182 + 157873769 AAAGATACTGAAGAAAACAGTATCTACCAAATTGGGTACTATAAGTC--------AGTTACTAAATTAAGAA-----------------CATGATTACCTCTATGGGAGAAAAtattattcctactttacaggtgagaaaactgagacttagagaagataagtcacttggccaaagacacacagtcagttaatacaggagacaggat i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170367843 199 + 172585720 AATGATACTGAAGAAAACAGTATCTACCCAATTGGGtaccataagtc--------aattactaaattaagaactttacctatattatctcatgattacctctatgggagaaaatattcttcctactttacaggtgagaaaactgagactcagagaagacaagtcacttggccaaagacacacagtcagttaatacaggagccaagtt i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169113146 199 - 170955103 AATGATACTGAAGAAAACAGTATCTACCCAATTGGGtaccataagtc--------aattactaaattaagaactttacctatattatctcatgattacctctatgggagaaaatattcttcctactttacaggtgagaaaactgagactcagagaagacaagtcacttggccaaaggcacacagtcagttaatacaggagccaagtt i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8399333 199 + 10161646 AATGATACTGAAGAAAACAGTATCTACCCAATTGGGtaccataagtc--------aattactaaattaagaactttacctatattatctcatgattacctctatgggagaaaatattcttcctactttacaggtgagaaaactgagactcagagaagacaagtcacttggccaaagacacacagtcagttaatagaggagccaagtt i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1430873 199 + 3144229 AAAGATACTGAAGAAAACAGTATGTACCCAATTAGGtaccataagtc--------aattactaaattaagaactttacctatattatctcatgattacctctatgggagaaaatattattcctactttacaggtgagaaaactgagactcagagaagacaagtcacttggccaaagacacacagtcagttaatacaggagccaagtt i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96716867 199 + 98384682 GATGATACTGAAGAAAACAGTATCTACCCAATTGGGtaccataaatc--------aattactaaattaagaactttacctatattatctcatgattacgtctatgggagaaaatattattcctgctttactggtgagaaaactgagactcagagaagacaagtcacttagccaaagacacacggtcagttaatacaggagccaagtt i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8253233 199 - 10857215 AAAGATATTGAAGAAAACAGTATGTACCCAATTGGGtaccataagtc--------aattactaaattaagaactttacctatattatctcatgattacctctatgggagaaaatattattcctactttacaggtgagaaaactgagactcagagaagacaagtcacttggccaaagacacacagtcggttaatacaggagccaagtt i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15642443 199 - 23502949 AAAGACACTGAAGAAAATAGTATGTACCCAATTGGGtaccataagtc--------aattgctaaattaagaactttacctatattatctcatgattacctctatgggagaaaatattattcctactttacaggtgagaaaactgagactcagagaagacaagtcacttggccaaagacacacagtcagttaatacaggagccaagtt i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169927117 190 + 171630274 aaaGATGCTGAAGAAAACAGTATctaccaaattgggtacggtaagtc--------aattacgaaattaagaactttacatatattacctcatgattgtctctatgggagaaaatattattcccaccttacaggtgagaaaaccgaggctcagag-----aagtcacttgtccaaagacaca----cagttagtacaggagccgggaG i calJac3.chr4 I 492 C 0 s saiBol1.JH378287 1327785 196 - 2905041 aaagaTACTGAAGAAAACGGTATCTACCAAATTGGGTACTGTAAGTCAATTACTAAATTactaaattaagaactttacatatattatctcataattgtctctgtgggagaaaatattatccccaccttacaggtgagaaaaccaagactcagag-----aagtcactcgtccaaag--aca----cagttaatacaggagccaggaG i saiBol1.JH378287 I 321 C 0 e otoGar3.GL873575 10973424 2113 - 12073884 I e aotNan1.NW_018494782v1 1537539 734 - 1813869 I e cebCap1.NW_016107695v1 1290271 843 - 2164891 I e dasNov3.JH569188 609426 10924 + 760995 I e canFam3.chr1 56204890 2167 + 122678785 I a score=742516.000000 s hg38.chr6_KB021644v2_alt 139616 141 + 185823 GAGTGCACACTCATGAGCATTCTGTTAGAACACCAGGCA-TTTA-----------------------------------------AAAACATGAATG------------------CAGAAAACCACA--------------TCAGTACGTACTCAgtgtgtgtgtgt--------gtgtgtttgtccctgtgtATATACTTA-------TATACGTACATATTCatatat s panTro5.chr6 173596269 155 + 175400573 GAGTGCACACTCGTGAGCATTCTGTTAGAACACCAGGCA-TTTA-----------------------------------------AAAACATGAATG------------------CAGAAAACCACAACCAGAAAACCACTTCAGTATGTACTCAgtgtgtgtgtgt--------gtgtgtttgtccctgtgtATATACTTA-------TATACGTACATATTCatatat i panTro5.chr6 I 110 C 0 s panPan2.chr6 171829313 155 + 173848474 GAGTGCACACTCGTGAGCATTCTGTTAGAACACCAGGCA-TTTA-----------------------------------------AAAACATGAATG------------------CAGAAAACCACAACCAGAAAACCACTTCAGTATGTACTCAgtgtgtgtgtgt--------gtgtgtttgtccctgtgtATATACTTA-------CATACGTACATATTCatatat i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11512554 137 - 12463322 GAGTGCACACTTGTAAGCATTCTGTTAGAACACCAGGCA-TTTA-----------------------------------------AAAACATGAATG------------------CAGAAAACCACA--------------TCAGTATGTACTCAgtgtgtgtgtgt--------gtg----tgtccctgtgtATATACTTA-------TATATGTACATATTCatatat i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156341992 144 + 157873769 gagtacacaCTTGTAAGCATTCTGTTAGAACATCAGGCATTTTA-----------------------------------------AAAAAATGAATGCATCACTGATGGTTCGACCAGAAAACCACA--------------TCAGTATGTACTC----------TCT--------GTGTGTTTGTCCGTGTGTATATACTTa-------tatatgta------catatat i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170368042 159 + 172585720 gaatgcaCACTTGTAAGCCTTCTGTTAGAACACCAGGCA-TTTA-----------------------------------------AAAAAATGAATGCATCGCAAATGGTTCGACCAGAAAACCACG--------------TTGGTATGTATTCAgtgtgtgtgtgt----------gtgtttgtccgtgtgtgtgtATATC-----ATTATATatacatatacgtatat i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169113345 156 - 170955103 gaatgcaCACTTGTAAGCATTCTGTTAGAACACCAGGCA-TTTA-----------------------------------------AAAAAATGAATGCATCGCAAATGGTTCGACCAGAAAACCACG--------------TTGGTATGTATTCAgtgtgtgtgtgt-------------tttgtccatgtgtgtgtATATC-----ATTATATatacatatacgtatat i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8399532 155 + 10161646 gaatgcaCACTTGTAAGCATTCTGTTAGAACACCAGGCA-TTTA-----------------------------------------AAAAAATGAATGCATCGCAAATGGTTCGACCAGAAAACCACG--------------TTGGTATGTATTCAgtgtgtgtgtg--------------tttgtccatgtgtgtgtATATC-----ATTATATatacatatacgtatat i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1431072 169 + 3144229 gaatgcaCACTTGTAAGCATTCTGTTAGAATGCCAGGCA-TTTA-----------------------------------------AAAAAATGAATGCATCACAAATGATTCGACCAGAAAACCACG--------------TTGGTATGTATTCAgtgtgtgtgtgtgtgtatgtgtgtgtttgtccatgtgtgtgtATATC-----ATTATATatacatatacgtatat i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96717066 168 + 98384682 gaatgcaCACTTGTAAGCATTCTATTAGAACACCAGGCA-TTTA-----------------------------------------AAAAAAGGAATGCATC-CAAATGGTTCGACCAGAAAACCACA--------------TTGGTATGTATTCAgtgtgtgtgtgtgtgtgtgtgtgtgtTTGTCCACGTGTGTGTATATC-----ATTATATatacatatacgtatat i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8253432 153 - 10857215 gaaGGCACACTTGTAAGCATTCTGTTAGAACGCCAGGCA-TTTA-----------------------------------------AAAAAATGAATGCATCACAAATGGTTCGACCAGAAAACCACG--------------TTGGTATGTATTCAgtgtgtgtgtgtgtgt----------------atgtgtgtgtATATC-----ATTATATatacatatacgtatat i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15642642 159 - 23502949 gaatgcaCACTTGTAAGCATTCTGTTAGAACACCAGGCA-TTTA-----------------------------------------AAAAAATGAATGCATCACAAATGGTTCGACCAGAAAACCACA--------------TCAGTATGTATTCAgtgtgtgtgtgt----------gtgtttgtccatgtgtgtgtATATA-----GTTATatatacatacacgtatat i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169927307 181 + 171630274 AAATGCACACTTGTAAGCGTTCTGTTAGAACAGTAGCCG-TTTACAAGATGAAC----------------GAACAGTAGCCAATCAAAACATAAATGCATCACTGATGGTTCCACCAGAAAACCTCA--------------TCGGTATGTATTCAGCATGCGTCCGT----------------GTCCGTGTGTGCATGTGGACTCACATTACATGTGGACATAGACAC-- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1327981 191 - 2905041 AAATGCACTCTTGTAAGCGTTCTGTTAGAACAGTAGCCG-TTTACAAAATGAACGTTTCATGGATGGTTAGAAGAGTAGCCAATTAAAACATGAATGCATCACCGACGGTTCAACCAGAAAACTTCA--------------CCAGCATGTATTCAGTGTGTGTCTGT----------------GTCCGTGTGTGCATATATACTCACATTatatgtg------tacac-- i saiBol1.JH378287 C 0 C 0 e otoGar3.GL873575 10973424 2113 - 12073884 I e aotNan1.NW_018494782v1 1537539 734 - 1813869 I e cebCap1.NW_016107695v1 1290271 843 - 2164891 I e dasNov3.JH569188 609426 10924 + 760995 I e canFam3.chr1 56204890 2167 + 122678785 I a score=965868.000000 s hg38.chr6_KB021644v2_alt 139757 118 + 185823 agggattggctatagggacttggattacacaactgtgggaactcctaaagcagcctgtgtcaggctgctgttatcaggctgaacctgacaccgggtcctgaagtttagaagccaggca s panTro5.chr6 173596424 118 + 175400573 agggattggctatagggacttggattacacaactgtgggaactcctaaagcagcctgtgtcaggctgctgttatcaggctgaacctgacaccgggtcctgaagtttagaagccaggca i panTro5.chr6 C 0 C 0 s panPan2.chr6 171829468 118 + 173848474 agggattggctatacggacttggattacacaactgtgggaactcctaaagcagcctgtgtcaggctgctgttatcaggctgaacctgacaccgggtcctgaagtttagaagccaggca i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11512691 118 - 12463322 agggattggctatagggacttggattacacaactgtgggaactcctaaagcagcctgtgtcaggctgctgttatcaggctgaacctgacaccgggtcctgaagtttagaagccaggca i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156342136 118 + 157873769 agggattggctatagggacttggattacacaactgtgggaactcttaaagcagcctatgtcaggctgctgttatcgggctgaacctgacactgggtcctgaagttgagaagccaggca i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170368201 118 + 172585720 agggattggctatagggacttggattacacaactgtgggaacttctaatgcagcctatgtcaggctgttgttatcagactgaacctgacactgggtcttgaagttgagaagctaggca i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169113501 118 - 170955103 agggattggctatagggacttggattacacaactgtgggaactcctaaagcagcctatgtcaggctgttgttatcagactgaacctgacactgggtcctgaagttgagaagctaggca i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8399687 118 + 10161646 agggattggctatagggacttggattacacaactgtgggaactcctaaagcagcctatgtcaggctgttgttatcagactgaacctgacactgggtcctgaagttgagaagctaggca i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1431241 118 + 3144229 agggattggctatagggacttggattacacaactgtgggaactcctaaagtagcctatgtcaggctgttgttatcagactgaacctgacactgggtcctgaagttgagaagccaggca i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96717234 118 + 98384682 agggattggctatagggacttggattacacaactgtgggaactcctagagcagcctatgtcaggctgttgttatcacactgaatctgacactggatcctgaagttgagaagccaggca i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8253585 118 - 10857215 agggattggctatagggacttggattacacaactgtgggaactcctaaagcagcctatgtcaggctgttgttatcagactgaacctgacactgggtcctgaagttgagaagccaggca i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15642801 118 - 23502949 agggattggctatagggacttggattacacaactgtgggaactcctagagcagcctatgtcaggctgttgttaccagactgaacctgacactggatcctgaatttgagaagccagggg i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169927488 117 + 171630274 agggattgctcagagggacctggattgcacaaccgtgggagctcctagagaggcctatgccaggc-cttgttgtgagactgcacctgtccccgggacctggagttgagaaggcaggcg i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1328172 117 - 2905041 aggggtcggtcatagggacctggatcgcacaaccatgggagctcctagagccgcctatgccaggc-gttgttgtgagactgcacctggccctgggacctggggttgagaaggcaggcg i saiBol1.JH378287 C 0 C 0 s aotNan1.NW_018494782v1 1538273 117 - 1813869 aggaattggtcatagggacctggattgcacagccgtgggagctcctagagcggcctatgccaggc-gttgttgtgagactgcacctgcccctgggacctggagttgggaaggcaggcg i aotNan1.NW_018494782v1 I 734 C 0 e otoGar3.GL873575 10973424 2113 - 12073884 I e cebCap1.NW_016107695v1 1290271 843 - 2164891 I e dasNov3.JH569188 609426 10924 + 760995 I e canFam3.chr1 56204890 2167 + 122678785 I a score=1598531.000000 s hg38.chr6_KB021644v2_alt 139875 175 + 185823 ttcaggaaggaacaatcacaagcctga-ctggaatcccattgggatgggctgaaacccatgtccattcctgttgcctctgactttggtgtgagcttcctgcagaagctgcccttttgctagcgcattacacacacatatctagcctgaagtcagaagagctgagagagaatccagt s panTro5.chr6 173596542 175 + 175400573 ttcaggaaggaacaatcacaagcctga-ctggaatcccattgggatgggctgaaacccatgtccattcctgttgcctctgactttggtgtgagcttcctgcagaagctgcccttttgctagcgcattacacacacacatctagcctgaagtcagaagagctgagagagaatccagt i panTro5.chr6 C 0 C 0 s panPan2.chr6 171829586 175 + 173848474 ttcaggaaggaacaatcacaagcctga-ctggaatcccattgggatgggctgaaacccatgtccattcctgttgcctctgactttggtgtgagcttcctgcagaagctgcccttttgctagtgcattacacacacacatctagcctgaagtcagaagagctgagagagaatccagt i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11512809 175 - 12463322 ttcaggaaggaacaatcacaagcctga-ctggaatcccattgggatgggctgaaacccatgtccattcctgttgcctctgactttggtgtgagcttcctgcagaagctgcccttttgctagtgcattacacacacatatctagcctgaagtcagaagagctgagagagaatccagt i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156342254 176 + 157873769 ttcaggaagggacgatcacaagcctaagctggaatcccattgggataggctgaaacccatgtccattcctgttgcctctgactttggtgtgagcttcctgcagaagctgcccttttgctagggcattacacacacatatctagcctgaaatcagaagagccgagagagaattcagt i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170368319 169 + 172585720 ttcaggaagggacgatcacaggcctgagctggaatcccattgggatgagctgaaactcatgtccgttcctgttgcctctgactt------gagcttcctgcagaagctgccc-tttgctagggcattccacacacatatctagcctgaaggcagaagagctgagagagaatccagt i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169113619 169 - 170955103 ttcaggaagggacgatcacaggcctgagctggaatcccattgggatgagctgaaactcatgtccgttcctgttgcctctgactt------gagcttcctgcaaaagctgccc-tttgctagggcattacacacacatatctagcctgaaggcagaagagctgagagagaatccagt i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8399805 169 + 10161646 ttcaggaagggacgatcacaggcctgagctggaatcccattgggatgagctgaaactcatgtccgttcctgttgcctctgactt------gagcttcctgcaaaagctgccc-tttgctagggcattccacgcacatatctagcctgaaggcagaagagctgagagagaatccagt i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1431359 167 + 3144229 ttcaggaagggacgatcacaggcctgagctggaatcccattggaatgagctgaaactcatgtccgttcctgttgcctctgac--------gagcttcctgcagaagctgccc-tttgctagggcattacacacacatatctagcctgaaggcagaagagctgagagagaatccagt i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96717352 175 + 98384682 ttcaggaagggatgatcacaggcctgagctggaatcccattgggatgagctgaaactcatgtccattcctgttgcctctgactttgctgtgagcttcctgcagaagctgccc-tttgctagggcattacacacacatctctagcctgaaggcagaagagctgagaaagaatccagt i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8253703 167 - 10857215 ttcaggaagggacgatcacaggcctgagctggaatcccattggaatgagctgaaactcatgtccgttcctgttgcctctgac--------gagcttcctgcagaagctgccc-tttgctagggcactacacacacatatctagcctgaaggcagaagagctgagagagaatccagt i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15642919 175 - 23502949 ttcaggaagggacggtcacaggcctgagctggaatcccattgcgatgagctgaaactcatgtccattcctgttgcctctgactttgctgtgagcttcctgcagaagctgcct-tttgctagggcattacacacacatatctagcctgaaggcagaagagctgagagagaatccagt i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169927605 171 + 171630274 ttcaggaaggggcagtcacagg-ctgagctggaatcccaccgggatgggctgaggccgac-tccattcctgttgcctctgacgttgttgtgagcttcctgcagaagctgcccttctgtga-ggcattatacacaca--tctagcctgaagtcggaagggctgagagaggatccaat i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1328289 173 - 2905041 ttctggaagggacaatcacaagcctgagctggaatcccactgggttgggctgaaacccacgtccattcctgttgcctctgactttggtgtgagcttcctgcagaagctgcccttttgtgagggcattacacacaca--tctaccct-aagtcagatgagctgagagaggacccaat i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1291114 174 - 2164891 ttcaggaagggacagtcacaagccggagctgaaatcccactgggatgggctgaaaaccacgtccattcctgttgcctctgactttggtgtgagcttcctgcagaagctgcccttttgtgagggcatggcacacaca--tctagcctgaagtcagaagagctgagagaggatccaat i cebCap1.NW_016107695v1 I 843 C 0 s aotNan1.NW_018494782v1 1538390 174 - 1813869 ttcaggaagggacgatcacaagcctgagctggaatcccaccgggatgggctgaaacccacgtccattcctgttgcctctgactttggtgtgagcttcctgcagaagctgcccttttgtgagggcattacacacaca--tgtagcctgaagtcagacgagctgagagaggatccaat i aotNan1.NW_018494782v1 C 0 I 52 e otoGar3.GL873575 10973424 2113 - 12073884 I e dasNov3.JH569188 609426 10924 + 760995 I e canFam3.chr1 56204890 2167 + 122678785 I a score=345481.000000 s hg38.chr6_KB021644v2_alt 140050 64 + 185823 -ttaaaaaaaaaaaaaaaaaaaaaaagctgttgcagaaccagctgctgcttcacaccgatgcagt s panTro5.chr6 173596717 60 + 175400573 -ttaaaaaaaaaaaaaaaaaaa----gcagttgcaggaccagctgctgcttcacaccgatgcagt i panTro5.chr6 C 0 C 0 s panPan2.chr6 171829761 56 + 173848474 -ttaaaaaaaaaaaaaga--------acagttgcaggaccagctgctgcttcacaccgatgcagt i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11512984 60 - 12463322 -ttttaaaaaaaaaaaaaaaaa----gcagttgcaggaccagctgctgcttcacaccgatgcagt i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156342430 54 + 157873769 -ttaaaaaaaaaaaga----------acagttgcaggaccagctgctgcttcacactgatgtggt i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170368488 52 + 172585720 -ttaaaaaaaaaga------------gcagttgcaggaccagttgttgcttcacactgatgcggt i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169113788 52 - 170955103 -ttaaaaaaaaaga------------gcagttgcaggaccagttgttgcttcacactgatgcggt i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8399974 52 + 10161646 -ttaaaaaaaaaga------------gcagttgcaggaccagttgttgcttcacactgatgcggt i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1431526 52 + 3144229 -ttaaaaacaaaga------------gcagttgcaggaccagttgttgcttcacactgatgcggt i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96717527 52 + 98384682 -ttaaaaaaaaaga------------gcaatttcaggaccagttgctacttcacaccgatgcggt i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8253870 52 - 10857215 -ttaaaaacaaaga------------gcagttgcaggaccagttgttgcttcacactgatgcggt i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15643094 52 - 23502949 -tttaaaaaaaaaa------------gcagttgcaggaccagttgctgcttcacaccaatgtggt i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169927776 52 + 171630274 aagagaaagaaaga------------gcagttttgggaccagctgctgcttgacaccactgtgg- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1328462 52 - 2905041 aagagaaagaaaga------------gcagtttcgggaccagctgct-ctggacaccgctgcggt i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1291288 53 - 2164891 aagagaaagaaaga------------gcagtttcgggaccagctgctgctggacaccgctgcggt i cebCap1.NW_016107695v1 C 0 C 0 e otoGar3.GL873575 10973424 2113 - 12073884 I e aotNan1.NW_018494782v1 1538564 52 - 1813869 I e dasNov3.JH569188 609426 10924 + 760995 I e canFam3.chr1 56204890 2167 + 122678785 I a score=301325.000000 s hg38.chr6_KB021644v2_alt 140114 40 + 185823 gagtcagcggatcagctgcaa-gggtgtgag-ctactaaatg s panTro5.chr6 173596777 40 + 175400573 gagttagcggatcagctgcaa-gggtgtgag-ctactaaatg i panTro5.chr6 C 0 C 0 s panPan2.chr6 171829817 40 + 173848474 gagtcagcggatcagctgcaa-gggtgtgag-ctactaaatg i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11513044 40 - 12463322 gagtcagcggatcagctgcaa-gggtgtgag-ctactaaatg i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156342484 40 + 157873769 gagtcagcggatcagctgcaa-gggtgtgag-ctactaaatg i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170368540 41 + 172585720 gaatcagtggatcagcagcaacacgtgtgag-ctactaaatg i rheMac8.chr4 C 0 I 48 s macFas5.chr4 169113840 40 - 170955103 gaatcagtggatcagcagcaacacgtgtgag-ctactaaat- i macFas5.chr4 C 0 I 3 s macNem1.NW_012011000v1 8400026 41 + 10161646 gaatcagtggatcagcagcaacacgtgtgag-ctactaaaTG i macNem1.NW_012011000v1 C 0 I 49 s cerAty1.NW_012002071v1 1431578 42 + 3144229 gaatcagtggatcagcagcaacacgtgtgagcctactaaatg i cerAty1.NW_012002071v1 C 0 I 49 s chlSab2.chr13 96717579 41 + 98384682 gaatcagcggatcagcagcaactcgtgtgag-ctactaaatg i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8253922 41 - 10857215 gaatcagtggatcaacagcaacacgtgtgag-ctactaaatg i manLeu1.NW_012106474v1 C 0 I 49 s colAng1.NW_012114488v1 15643146 41 - 23502949 gaatcggtggatcagcagcaacacgtgtgag-ctactaaatg i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169927828 41 + 171630274 gaattagcagatcagcagtgacgtgtgggag-ctcctaaatg i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1328514 40 - 2905041 gaatcggaggattggcagcaacgtgtggggg--tcaccaatg i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1291341 41 - 2164891 gaatcggcggaccggcagcaacctgtgggag-ttaccaaatg i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1538616 41 - 1813869 gcatcagcggatcagcagcaacgtgtgggag-ctgctcaatg i aotNan1.NW_018494782v1 I 52 C 0 e otoGar3.GL873575 10973424 2113 - 12073884 I e dasNov3.JH569188 609426 10924 + 760995 I e canFam3.chr1 56204890 2167 + 122678785 I a score=75503.000000 s hg38.chr6_KB021644v2_alt 140154 18 + 185823 gctgctgcttc------------------------ctctcca s panTro5.chr6 173596817 18 + 175400573 gctgctgcttc------------------------ctctcca i panTro5.chr6 C 0 C 0 s panPan2.chr6 171829857 18 + 173848474 gctgctgcttc------------------------ctctcca i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11513084 18 - 12463322 gctgctgcttt------------------------ctctcca i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156342524 18 + 157873769 gctgctgcttc------------------------ctctcca i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169113883 42 - 170955103 gctccatcttctaaatgtttgtttagactgaaacttttttca i macFas5.chr4 I 3 I 5 s chlSab2.chr13 96717620 18 + 98384682 gctgccgcttc------------------------ccctcca i chlSab2.chr13 C 0 I 65 s colAng1.NW_012114488v1 15643187 18 - 23502949 gctgctgcttc------------------------ccctcca i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169927869 18 + 171630274 gctgctgcctc------------------------ctctccg i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1328554 18 - 2905041 gctgctgcctc------------------------ctctccg i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1291382 18 - 2164891 gctgctgcctt------------------------ctctccg i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1538657 18 - 1813869 gccgctgcctc------------------------ctctccg i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10973424 2113 - 12073884 I e dasNov3.JH569188 609426 10924 + 760995 I e canFam3.chr1 56204890 2167 + 122678785 I e cerAty1.NW_012002071v1 1431620 49 + 3144229 I e manLeu1.NW_012106474v1 8253963 49 - 10857215 I e macNem1.NW_012011000v1 8400067 49 + 10161646 I e rheMac8.chr4 170368581 48 + 172585720 I a score=9531394.000000 s hg38.chr6_KB021644v2_alt 140172 1094 + 185823 tcttccaagtctcaaacaaacattttcttgtggt-ctaccttaaaaaga--cacatacgaaaggtggcttcagaggaatgtcattctgcctggctatgtcaagacgtttcaaagtcactacaATCACATGAAACAGAACT-ATGTCAGAGTAGTGGGGACACTTCTACATCTGGGGACACTCTTGCTGCATCTCAGAATTTTGTCTCATATGAGTTCCCCCAACCGTGCTTGTGCCACATGCCTTtcaacttaaaaatgataaggtctataaattttgaaagccaactttatttcttacagagggttacagccta-------cgaggtgctccttctgacaggctgggaagtatagcctctggcagggacctttagcaggcatttcaaaggagaaaaggtgagacaggaacttatgctgaaggggttggctcaacatacatattcaacagattataggaggagcgatgaatattcatgaaggtgtcctgacccat------tgaacaaacatgcatattacatatgacccatatttactctgaggtggagacttaacattcaaatgcatgacaattaagcctt--atatgtcacagtgtgaagtagggacaca-ggcactcggtgcacagctgctgtaaaccagccagaaccagtccatggtcggtgac---ctcaacaggagacaggtattgaaatcagccccttgtcaatcaaagctatagttatggctggtggag-caggcggtcagtccacgtttcatgattggtaagctgcagttccttcaacattgcttatctcttggccagtgcttgtttagctgctagagaaaaataaaagccttgtgtcggtaagaacatagtttactcttttagcataggctgcatgacttaaccctttcctggcattgccttaggtcctattgataacttggcattttattgccacaaagagtcagtcctatcagtcttatgacctctattttaacattagtgctggtcagctgttgtgtctaaaccgcaaaaaggagtgggtataaggaggcgtgtctaacctcccatcccatcagggctgagaactaacatgtaaagttttctctggggtccccttggccaagag s panTro5.chr6 173596835 1100 + 175400573 tcttccaagtctcaaacaaacactttcttgtggt-ctaccttaaaaaga--cacatacgaaaggtggcttcagaggaatgtcattctgcctggctatgtgaagacatttcaaagtcactacaATCACATGAAACAGAACT-ATGTCAGAGTAGTGGGGACACTTCTAGATCTGGGGACACTCTTGCTGCATCTCAGAATTTTGTCTCACGTGAGTTCCCCCAACCGTGCTTGTGCCACATGCCTTtcaacttaaaaatgataaggtctataaattttgaaagccaactttatttcttacagagggttacagccta-------cgaggtgctccttctgacaggctgggaagtatagcctctggcagggatctttagcaggcatttcaaaggagaaaaggtgagacaggaacttatgctgaaggggttggctcaacatacatattcaacagattataggaggagcgatgaatattcatgaaggtgtcctgacccatgtttattgaacaaacatgcatattacatatgatccatatttactctgaggtggagacttaacattcaaatgcattacaattaagcctt--atatgtcacagtgtgaagtagggacaca-ggcactcggtgcacagctgctgtaaaccagccagaaccagtccgtggtcggtgac---ctcaacaggagacaggtattgaaatcagccccttgtcaatcaaagctatagttatggctggtggag-caggcggtcagtccacgtttcatgattggtgagctgcagttccttcaacattgcttatctcttggccagtgcttgtttagctgctagagaaaaataaaagccttgtgtcggtaagaacatagtttactcttttagtgtaggctgcgtgacttaaccctttcctggcattgccttaggtcctattgataacttggcattttattgccacaaagagtcagtcctatcagtcttatgacctctattttaacattagtgctggtcagctgttgtgtctaaaccacaaaaaggagtgggtataaggaggcgtgtctaacctcccatcccatcagggctgagaactaacatgtaaagttttctctggggtccccttggccaagag i panTro5.chr6 C 0 C 0 s panPan2.chr6 171829875 1100 + 173848474 tcttccaagtctcaaacaaacactttcttgtggt-ctaccttaaaaaga--cacatacgaaaggtggcttcagaggcatgtcattctgcctggctatgtcaagacatttcaaagtcactacaATCACATGAAACAGAACT-ATGTCAGAGTAGTGGGGACACTTCTAGATCTGGGGACACTCTTGCTGCATCTCAGAGTTTTGTCTCACGTGAGTTCCCCCAACCGTGCTTGTGCCACATGCCTTtcaacttaaaaatgataaggtctataaattttgaaagccaactttatttcttacagagggttacagccta-------cgaggtgctccttctgacaggctgggaagtatagcctctggcagggatctttagcaggcatttcaaaggagaaaaggtgagacaggaacttatgctgaaggggttggctcaacatacatattcaacagattataggaggagcgatgaatattcatgaaggtgtcctgacccatgtttattgaacaaacatgcatattacatatgatccatatttactctgaggtggagacttaacattcaaatgcattacaattaagcctt--atatgtcacagtgtgaagtagggacaca-ggcactcggtgcacagctgctgtaaaccagccagaaccagtccgtggtcggtgac---ctcaacaggagacaggtattgaaatcagccccttgtcaatcaaagctatagttatggctggtggag-caggcggtcagtccacgtttcatgattggtgagctgcagttccttcaacattgcttatctcttggccagtgcttgtttagctgctagagaaaaataaaagccttgtgtcggtaagaacatagtttactcttttagtgtaggctgcgtgacttaaccctttcctggcattgccttaggtcctattgataacttggcattttattgccacaaagagtcagtcctatccgtcttatgacctctattttaacattagtgctggtcagctgttgtgtctaaaccgcaaaaaggagtgggtataaggaggcgtgtctaacctcccatcccatcagggctgagaactaacatgtaaagttttctctggggtccccttggccaagag i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11513102 1100 - 12463322 tcttccaagtctcaaacaaacattttcttgtggt-ctaccttaaaaaga--cacatacgaaaggtggcttcagaggaatgtcattctgcctggctatgtcaagacatttcaaagtcactacaATCACATGAAACAGAGCT-ATCTCAGAGTAGTGGGGACACTTCTAGATCTGGGGATACTCTTGCTGCATCTCAGAATTTTGTCTCACGTGAGTTCCCCCAACCGTGCTTGTGCCACATGCCTTtcaacttaaaaatgataaggtctataaattttgaaagccaactttatttcttacagagggttacagccta-------cgaggtgctccttctgataggctgggaagtatagcctctggcagggacctttagcaggcatttcaaaggagaaaaggtgagacaggaacttatgctgaaggggttggctcaacatacatattcaacagattataggaggagcgatgagtattcatgaaggtgtcctgacctatgtttattgaacaaacatgcatattacatatgacccatatttactctgaggtggagacttaacattcaaatgcatgacaattaagcctt--atatgtcacagtgtgaagcagggacaga-ggcactcggtgcacagctgctgtaaaccagccagaaccagtccttggtcggtgac---ctcaacaggagacaggtattgaaatcagccccttgtcaatcaaagctatagttatggctggtggag-caggcggtcagtccacgtttcatgattggtgagctgcagttccttcaacattgcttatctcttggccagtgcttgtttagctgctagagaaaaataaaagccttgtgttggtaagaacatagtttactcttttagtgtaggctgcatgacttaaccctttcctggcattgccttaggtcctattgataacttggcattttattgccacaaagggtcagtcctatcagtcttatgacctctattttaacattagtgctggtcagctgttgtgtctaaaccgcaaaaaggagtgggtataaggaggtgtgtctaacctcccatcccaccagggctgagaactaacatgtaaagttttctctggggtccccttggccaagag i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156342542 1104 + 157873769 tcttccaagtctcaaacaaacattttcttgtggt-ctaccttaaaaaga--cacatacgaaaggtggcttcagaggaatgtcattctgcctggctatgtcaagacatttcaaagccactacaATCACATGAAACAGAACT-ATGTCAGAGTAGTGGGGACACCTCTACATCTGGGGACACTATTGCTGCATCTCAGAATTTTGTCTCATGTGAGTTCCCCCAACCATGCTTGTGCCACATGCCTTtcaacttaaaaatgataaagtctataaattttgaaagccaactttgtttcttacggagggttacggccta-------tgaggtgctcattctgacaggctgggaagtatagcctctggcagggacctttagcaggcatttcaaaggagaaaaggtgagacaggaacttatgctgaaggggttggctcaacatatatattcaacagattataggaggagctatgaatattcaggaaggtgtcctcactcatgtttattgaacaaacatgcatattacatatgacccatatttactttgaggtggagacttaacattcaaatgcattacaattaagcttt--gtatgtcacagtgtgaagtagggacaca-ggcactcagtgcacagctgctgtaaaccagccagaaccggtccgtggtcggtgaccttctcaacaggagacaggtattgaaatcagcctcttgtcaatcaaagctatagttatgactggtggagccaggcggtcagtccacgtttcatgattggtgagctgcaattccttcaacattgcttatctcttggccagtgcttgtttagctgctagagaaaaataaaagccttgtgtcggtaagaacatagtttactctttaagtggaggctgcacgacttaaccctttcctggtattgccttaggtcctattgataacttggcgttttattgccacaaagagtcagtcctgtcagtcttaagacctctattttaacattagtgctggtcagctgttgtgtctaaactgcaaaaaggagtgggtataaggaagcatgtctgacctcccatcccaccagggctgagaactaacatgtaaagttttctctggggtccccttggccaagac i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170368629 1078 + 172585720 tgttccaagtctcaaacaaacattgtcttgtggt-ctaccttaaaaaga--tgcatacgaaaggtggattcagagaaatgtcgttctgcctggctatgtcaagacattttaaagtcact--aATCACATGAAACAGAACTCATGTCAGAGTAGTGGGGACACCTCTAGATCTGGGGACACTCTTGCTGGATCTCAGAATTTTGTCTCATGTGAGTTCCCACAACCATGCTTTTGCCACATGACTTtcaacttcagaatgataaggtctataaattttgaaagccaactttatttcttacagagtgttagagccta-------tgaggtgt-------gacaggctgggaagtatagcctctggcagggacctttagcaggcatttcaaaagagaaaaggtgagacaggaacttatgctgaaggggttggctcaacacacatattcaacagattataggaggagctatgaatattcatgaaggtgtcccgacccatgtttattgaacaaacatgtgtattacatatgacccatgtttactttgaggtggagacttaacattcaaatgcattacaattaggcctt--atatgtcacagtgtgaagtggggacaga------------------tgctgtaaaccagccggaaccagtccagggtcagtgaccttctcaacaggagagaggtattgaaatcagcctcttgtcaatcaaagccatagttatggctggtggag-caggcggtcagtccacgtttcatgattggtgagctgcaattgcttcagcattgcttatctcttggccagtgcttgtttagctgctagagaaaaataaaagccttgtgttggtaagaacatagtttactctggaagtgtagggtgcgtgactttgccctttcctggcattgctttaggtcctattgataacttggtgttttattgccacaaagaatcagtcctgtcaatcttaggacctctattttaaccttagtgctggttggctgttgtgtctaaatcgcaaaagggagtgggtatagggaggcaagtctgacctcccataccaccagggctgagcactaacatgtaaagttttctctggggtccccttggccaagag i rheMac8.chr4 I 48 C 0 s macFas5.chr4 169113930 1078 - 170955103 tgttccaagtctcaaacaaacattgtcttgtggt-ctaccttaaaaaga--tgcatacgaaaggtggattcagagaaatgtcgttctgcctggctatgtcaagacattttaaagtcact--aATCACATGAAACAGAACTCATGTCAGAGTAGTGGGGACACCTCTAGATCTGGGGACACTCTTGCTGGATCTCAGAATTTTGTCTCATGTGAGTTCCCACAACCATGCTTTTGCCACATGACTTtcaacttcagaatgataaggtctataaattttgaaagccaactttatttcttacagagggttagagccta-------tgaggtgc-------gacaggctgggaagtatagcctctggcagggacctttagcaggcatttcaaaagagaaaaggtgagacaggaacttatgctgaaggagttggctcaacacacatattcaacagattataggaggagctacgaatattcatgaaggtgtcccgacccacgtttattgaacaaacatgggtattgcatatgacccatgtttactttgaggtggagacttaacattcaaatgtattacaattaggcctt--atatgtcacagtgtgaagtggggacaga------------------tgctgtaaaccagccagaaccagtccggggtcagtgaccttctcaacaggagagaggtattgaaatcaccctcttatcaatcaaagctatagttatggctggtggag-cagacggtcagtccacgtttcatgattggtgagctgcaattgcttcagcattgcttatctcttggccagtgcttgtttagctgctagagaaaaataaaagccttgtgttggtaagaacatagtttagtctggaagtgtagggtgcgtgactttgccctttcctggcattgctttaggtcctattgataacctggtgttttactgccacaaagaatcagtcctgtcagtcttacgaactctattttaacattagtgctggttggctgttgtgtttaaaccgcaaaagggagtgggtatagggaggcaagtctgacctcccataccaccagggctgagcactaacatgtaaggttttctctggggtccccttggccaagag i macFas5.chr4 I 5 C 0 s macNem1.NW_012011000v1 8400116 1079 + 10161646 TGTTCCAAGTCTCAAACAAACATTGTCTTGTGGTCCTACCTTAAAAAGA--TGCATACGAAAGGTGGATTCAGAGAAATGTCGTTCTGCCTGGCCATGTCAAGACATTTTAAAGTCACT--AATCACATGAAACAGAACTCATGTCAGAGTAGTGGGGACACCTCTAGATCTGGGGACACTCTTGCTGGATCTCAGAATTTTGTCTCATGTGAGTTCCCACAACCATGCTTTTGCCACATGACTTtcaacttcaggatgataaggtctataaattttgaaagccaactttatttcttacagagggttagagccta-------tgaggtgc-------gacaggctgggaagtatagcctctggcagggacctttagcaggcatttcaaaagagaaaaggtgagacaggaacttatgctgaaggggttggctcaacacacatattcaacagattataggaggagttacgaatattcatgaaggtgtcctgactcacgtttattgaacaaacatgggtattgcatatgacccatgtttactttgaggtggagacttaacattcaaatgtattacaattaggcctt--atatgtcacagtgtgaagtgaggacaga------------------tgctgtaaaccagccagaaccagtccggggtcagtgaccttctcaacaggagagaggtattgaaatcaccctcttatcaatcaaagctatagttatggctggtggag-cagacggtcagtccacgtttcatgattggtaagctgcaattgcttcagcattgcttatctcttggccagtgcttgtttagctgctagagaaaaataaaagccttgtgttggtaagaacatagtttagtctggaagtgtagggtgcgtgactttgccctttcctggcattgctttaggtcctattgataacctggtgttttactgccacaaagaatcagtcctgtcagtcttacgaactctattttaacattagtgctggttggctgttgtgtttaaaccgcaaaagggagtgggtatagggaggcaagtctgacctcccataccaccagggctgagcactaacatgtaaggttttctctggggtccccttggccaagag i macNem1.NW_012011000v1 I 49 C 0 s cerAty1.NW_012002071v1 1431669 1085 + 3144229 tgttccaagtctcaaacaaacattgtcttgtggt-ctaccttaaaaaga--tgcatacgaaaggtggattcagagaaatgtcgttctgtctggctatgtcaagacattttaaagtcact--aATCACATGAAACAGAATTTATGTCAGAGTAGTGGGGACACCTCTAGATCTGGGGACACTCTTGCTGGATCTCAGAATTTTGTCTCATGTGAGTTCTCACAACCATGCTTTTGCCACATGTCTTtcaacttcaggatgataaggtctataaattttgaaagccaactttatttcttacagagggttagagcctaccaggtgcgaggtgc-------gacaggctgggaagtatagcctctggcagggacctttagcaggcatttcaaaagagaaaaggtgagacaggaacttatgctgaaggagttggctcaacacacatattcaacagattataggaggagctatgaatattcatgaaggtgtcctgacccatgtttattgaacaaacatgggtattgcatatgacccatgtttactttgaggtggagacttaacattcaaatgtattacaattaggcctt--atatgtcacagtgtgaagtggggacaga------------------tgctgtaaaccagctagaaccagtctggggtcagtgaccttctcaacaggagagaggtattgaaatcaccctcttatcaatcaaagctatagttatggctggtagag-cagacggtcagtccacgtttcatgattggtgagctgcaattgcttcagcattgcttatctcttggccagtgcttgtttagctgctagagaaaaataaaagccttgtgttggtaagaacatagtttagtctggaagtgtagggtgcgtgactttgccctttcctggcattgctttaggtcctatcgataacctggtgttttactgccacaaagaatcagtcctggcagtcttacgacctctattttaacattagtgctggtcggctgttgtgtttaaaccgcaaaagggagtgggtatagggaggcaagtctgacctcccataccaccagggctgagcactaacatgtaaagttttctctggggtccccttggccaagag i cerAty1.NW_012002071v1 I 49 C 0 s chlSab2.chr13 96717703 1070 + 98384682 tgttcCAAGTCTCAAACAAACATTTTCCTGTGGT-CTACCTTAAAAAGACGCGCATATGAAAGGTGGATTCAGAGAAATGTCGTTCTGCCTGCCTATGTCAAGACATTTAAAAGTCACT--AATCACATGAAACAGAACTCATGTCAGAGTAGTGGGGGCACCTCTAGATCTGGGGACGCTCTTGCTGGATCTCAGAATTTTGTCTCATGTGAGTTCCCACAACCACGCTTTTGCCACATACCTTTCAGCCTCaaaatgataaggtctataaattttgaaagccaactttatttcttacagagggttagagccta-------cgaggtgc-------gacaggctgggaagtatagcctctggcagggacctttagcag---------aagagaaaaggtgagacaggaacttatgctgaaggggttggctcaacacacatattcaacaggttataggaggagctatgaatattcgtgaaggtgtcctgacccatgtttattgaacaaacatgcatattacatatgacccatgtttactttgaggtggagacttaacattcaaatgcattacaattaggcctt--atatgtcacagtgtgaagtggggacaga------------------tgctgtaaaccagccggaaccagtccagggtcagtgaccttctcaacagg-gagaggtattgaaatcagcctcttgtcaatcaaagctatagttacggcgggtggag-caggtggtcagtccacgtttcatgattggtgagctgtaattgcttcagcattgcttgtctcttggccagtgcttgtttagctgctagagaaaaataaaagccttgtgttggtaagaacatagtttactctggaagtgtagggtgcgtgactttgccctttcctggcattgctttaggtcctattgataacctggtgttttactgccacaaagaatcagtcctgtcagtcttacgacctctattttaacattagtgctggtcggctgttgtgtttaaaccgcaaaagggagtgggtatagggaggcaagtctgacctctgataccaccagggctgagcactaacaagtaaagttttctctggggtccccttggccaagag i chlSab2.chr13 I 65 C 0 s manLeu1.NW_012106474v1 8254012 1085 - 10857215 tgttccaagtctcaaacaaacgttgtcttgtggt-ctaccttaaaaaga--tgcatacgaaaggtggattcagagaaatgtcgttctgcctggctatgtcaagacattttaaagtcact--aATCACATGAAACAGAATTCATGTCAGAGTAGTGGGGACACCTCTAGATCTGGGGACACTCTTGCTGGATCTCAGAATTTTGTCTCATGTGAGTTCCCATAACCATGCTTTTGCCACATGTCTTtcaacttcaggatgataaggtctataaattttgaaagccaactttatttcttacagagggttagagcctaccaggtgcgaggtgc-------gacaggctgggaagtatagcctctggcagggacctttagcaggcatttcaaaagagaaaaggtgaaacaggaacttatgctgaaggagttggctcaacacacatattcaacagattataggaggagctatgaatattcatgaaggtgtcccgacccatgtttattgaacaaacatgggtattgcatatgacccatgtttactttgaggtggagacttaacattcaaatgtattacaattaggcctt--acatgtcacagtgtgaagtggggacaga------------------tgctgtaaaccagccagaaccagtccagggtcagtgaccttctcaacaggagagaggtattgaaatcaccctcttatcaatcaaagctatagtcatggcttgtagag-cagacggtcagtccacgtttcatgattggtgagctgcaattgcttcagcattgcttatctcttggccagtgcttgtttagctgctagagaaaaataaaagccttgtgttggtaagaacatagtttagtctggaagtgtagggtgcgtgactttgccctttcctggcattgctttagatcctaccgataacctggtgttttactgccacaaagaatcagtcctgtcagtcttacgacctctattttaacattagtgctggtcggctgttgtgtttaaaccgcaaaagggagtgggtatagggaggcaagtctgacctcccataccaccagggctgagcactaacatgtaaagttttctctggggtccccttggccaagag i manLeu1.NW_012106474v1 I 49 C 0 s colAng1.NW_012114488v1 15643205 1065 - 23502949 tcttccaagtctcaaacaaacattttcttgtggt-ctaccttaaaaaga--cgcatacgaaaagtggattcagagaaatgtcgttctgcctggctatgtcaagacattttaaagtcact--aATCACATGAAACAGAACTCAGGTCAGAGTAGTAGGGACACCTCTAGATCTAGGGACACTCTTGCTGGGTCTCAGAATTTTGTCTCATGTGAGTTCCCACAACCATGCTTTTGCCACATGTCTTtcaacttcaaaatgataaggtctataaattttgaaagccaactttatttctttcagagggttagagccta-------cgaggtgc-------gacaggctgggaagtatagcctctggcagggacctttagcaggcatttcaaaagagaaaaggtgagataggaacttatgctgaaggagttggctcaacacacatattcaacaggttataggaggagctatgaatattcatgaaggtgtcccgacccatgtttattgaacaaacatgcgtattacatatgactcatgtttactttgaggtggagagttaacattcaaatgcattacaattaggcctt--atatgtcacagtgtgaagtggggacaga------------------tgctgtaaaccagccagaaccagtccggggtcagtgaccttctcaacaggagagagataatgaaatcagcctcttgtcaatcaaagctatagttatggctggtagag-caggtggtcagtccacgtttcatgattgatgagctgca-----------attgcttatctcttggccagtgcttgtttacctgctagagaaaaataaaagccttgtgttggtaagaacgtagtttactctggaagtgtagggtgcgtgac--tgccctttcctggcattgctttaggtcctattgataacctggtgttttattgccacaaagaatcagtcctgtcagtcttacgacctctattttaacattagtgctggtcggctgttgtgtgtaaaccgcaaaagggagtgggtataaggaggcatgtctgacctcccataccaccaggactgagcactgacatgtaaagttttctctggggtccccttggccaagag i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169927887 1063 + 171630274 gattccatgtctcaaacaaacattttcttgtgat-ctaccttaagaaga--cccatgagaaaggtggattcagagaaatgtagttctgtctggctgtgtcaacacatttcagagtcactacaGTCACATTAAACAGAACCCAGGTCACAGCAG-GGGGGCACCTCTAGATCTGGGGACACTCTGGCTGGATCTCAGAATTTTGTCTCGTGTGAGTTCCC-CGACCGTGGCAGTGCCACACGCCTTtcaactgaaatatgatgaggtctatacattttgaaagccaactctttct--tacagagggttacagccta-------tgaggtgttcgctctggcaggctacgaagtatggcctctggcagggaccttgagcaggcgtttcaaaggagaaaatgggagacaggaactgatgctggcggggttggctcaatgcccatattcatcaggtgatggg-ggaactatgaacattcacgaaggcctcctgacccatgttcactgaacagacatgcgtattacatatgacccatgcttacttagagatggagacttaacattcagatgcattacgattaggcctcgtatatgtcacgatgtgaagcagggacacaaggtactcagggcacagccgctgtaaaccagccagaaccagtccacggtcggtgaccttctcaacaggagacagccactgaaatcagcctct--------------gtggtcacggccggcggaa-cgg--gggcactcagcatctcaggatgggccaaccgcc-tcgcttcagcagggcctagctcacggccggtg-ttgttta----------------agaag-cttgtgttggtgagaacagagtttgctctttaagggtgggctgcatgacgtaatgctttcctgacatggccttgggtcctgtggataacttggtgttttgttgccacaaagggtcggtcctgtcagtctgatgacctgcattttaacatgagtgctggtca-ctg-tgtgtctcaacggcaaaagggagtgggaacaagggggcgtgtctgacctc--ctcccagcaggactgagaactgacatgtaaagttttctccggggtccccttggccaagag i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1328572 1062 - 2905041 gcttccatgtctcaaacaaacgtttttttgtgat-ctacgttaagaaga--cccataagacaggtggattcagagaaatgtagttctgtctggctgtgtcaacacatttcagagtcactacaATCACATTAAACAGAACCCATGTCACAGTA--GGGGACACCTCGAGATCTGGGGACACTCCTGCTGGATCTCAGAATTTTGTCTCATGTGAGTTCCT-CAACCATGCTAGTGCCGCGCGCCTTtcaactgaaggatgatgaggtctgtacattttggaagccaaccgtcttt-gtacagagggttatagccta-------tgaggtgctcactctggcaggctagaaagtatggcctctggcaggaacc-tgagcaggcatttcaaaggagaaaaggggagacaggaactttcgctgaaggcgttggctcaacatccatattcaacaggtgatagg-agaactatgaacattcgcgaaggcctcctggcccgtgtttactgaacaaacacgcatattacat---acccatgcttacttgaaggtggagacttaacactcaaatgccttacgattaggcctc--atatgttgcaacgtgaagcagggacatgaggtactcagggcacagctgctgtgaaccagccagaaccagtccacggtcggtgaccttctcaacaggagacggtcactgaaatcagcctctggtcgatcaaagccgtagtcacggctggcagaa-cgg--ggtcagt---catctcaggatgggtgagctgcc-ttgcgtcagcattgctcagctcacggccagtg-tcgttta----------------agaagccttgtgctgataagaac--aattgactctttaagggtaaggtgcatgacataatgctttcctgacattgccttaggtcctgtggataacttggtgttttgttgccacaaagggtcagtcctgttagtctgatgacctccatttt--cacgagtgctggtca-ctg-tgtgtctaaacggcaaaaggtagtgtgtataaggaggcgtgtctgacctc--accccaccaggactgagaaataacatgt--agttttttctggggt-cccttggccaagag i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1291400 1072 - 2164891 gcttccatgtctc-aacaaacattttc-tgtgat-ctaccttcagaaga--tccataagaaaggtggattcagagaaatgtagttctatctggctatgtcaacacatttcagagtcaccacaATCACATTAAACAGAACCCGTGTCACTGTA--GGGGACACCTCTAGATCTGGGGACACTCTTGCTGGATCTCAGAATTTTGTCTCATGTGAGTTCCC-CAACCATGCCAGTGCCACACGTCTTtcaactgcaataggatgaggtctgaacattttgaaagccaactgtctttcttacagaggggtacagccta-------tgaggtgttcactctggcaggctaggaagtatggcctctggcagggagcttgagcaggcatttcaaaggagaaaaggtgagacaggagcttatgctgaaggggttggctccacatccatattcaacagatgacaggaggaactatgaacactcatgaaggcctcctgacccatgtttattgaacaaacatgcatattacatatgacccatgcttactttaaggtggagacttaagattcaaatacgttatgattaggcctc--gtatgtcacaacctgaagcagggacacaaggtactcaaggcacagctgctgtgaaccagccagaaccagtccacggtcggtgaccttctcaacaggagacagtcactgaaatcagcctctggtcgatcaaagctgtagtcacggctggcggaa-agg--ggtcggtcagcatctcaggatgggtgagctgcc-ttgcttcagcattgcttagctcacagccagtg-ttgttta----------------agaagccttgtgttggtaagaac--agtttactctttaagggtagggtgcatgacataatgttttcctgacatcgccttaggtcctgtggataacttggtgttttgttgccacacagggtcagtcctgttagtctgatgacctccattttaacatgagtgctggtca-ctg-tgtgtctaaatggcaaaaggtagtgtgtataaggaggcgtgtctgacctc--atcccagcaggactgagagttagcatgt--agttttctctggggtccccttggccaagag i cebCap1.NW_016107695v1 C 0 I 2996 s aotNan1.NW_018494782v1 1538675 1066 - 1813869 gcttccgtgtctcaaacaaacattttcctgtgat-ccaccttaagagga--cccataagaaaggtggattcagagaaatgtagttctgtctggctatgtcaacacatttcagagtcactaAGGTCACATTAACCAGAGCCCATGTCACAGTA--GGGGGC-CCTCTAGATCTGGGGACACTCTTGCTGGACCTCAGAATTTTGTCTCACGTGAGTTCCC-CAACCATGCTAGCGCCACACGCCTTtcaactgaaaggtgatgaggtctatgcatttcgaaagccaactgtctttcttacagagggttacagccta-------tgaggtgttcactccggcaggctgggaagtatggcctctggcagggaccttgagcaggcatttcaaaggagaaaaggtgagacaggaagttatgctgaaggggttggctcaacatccatattcaacaggtgacaggaggaactgtgaacactcgtgaaggccccctgacgcgtgtttactgaacaaacatgcacattacatgtgacccatgcttactttaaggtggagacttaactttccaatgcactgcgattaggcctc--ggatgtcacaacgtgaagcagggacacagggtactcagggcacagctgctgtgaaccagccagaaccagtccgtggtc-gtgac---ctcagcaggagacagtcactggaatcagcctctggtcgatcaa------agtcacggctggcggaa-cgg--cgtcagtcagcgtctcgggatgggtgagctgcc-ttgcttcggcatcgctcagctcacggccagtg-ttgttta----------------agaagccttgtgttggtaggaacagagtttactctctaa-ggtagagtgcatgacgtaatgctttcctgacatcgccttaggtcctgtggatagcttggtgtttttttgccacaaagggtcagtcctgttagtctgatgacctccattttaacatgagtgctggtca-ccg-tgtgtctaaatggcagaaggtggtgggtacaaggaggcgtgtctgacctc--atcccaccaggactgagaactaacatgcaaagttttctgcagggtccccttggccaagag i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10973424 2113 - 12073884 I e dasNov3.JH569188 609426 10924 + 760995 I e canFam3.chr1 56204890 2167 + 122678785 I a score=366549.000000 s hg38.chr6_KB021644v2_alt 141266 46 + 185823 ----ggggtgggttagtc----gcagggggctgaggattttatttttagttCTC s panTro5.chr6 173597935 46 + 175400573 ----ggggtgggttagtt----gcagggggctgaggattttatttttagttCTC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171830975 46 + 173848474 ----ggggtgggttagtc----gcagggggctgaggattttatttttagttCTC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11514202 46 - 12463322 ----ggggtgggttagtc----gcagggggctgaggattttatttttagttCTC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156343646 50 + 157873769 ----ggggtgggttagtcagttgcaggaggctgaggattttatttttagttCTC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170369707 46 + 172585720 ----tgggtggattagtt----gcagggggctgaggattttatttttagttCTC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169115008 46 - 170955103 ----tgggtgagttagtt----gcagggggctgaggattttatttttagttCTC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8401195 46 + 10161646 ----tgggtgagttagtt----gcagggggctgaggattttatttttagttCTC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1432754 46 + 3144229 ----tgggtgggttagtt----gcagggggctgaggattttatttttagttCTC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96718773 46 + 98384682 ----tgggtgggttagtt----gcagggggctgaggattttatttttagttCTC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8255097 46 - 10857215 ----tgggtgggttagtt----gcagggggctgaggattttatttttagttCTC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15644270 46 - 23502949 ----ggggtgggttagtt----gcagggggatgaggattttatttttagttCTC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169928950 50 + 171630274 tgagtaggtttgtcagtt----gcaggggggtggggattttattttcagttCTC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1329634 49 - 2905041 tgagtaggttagtcagtt----gca-gggagtgaggatttcattttcagttttc i saiBol1.JH378287 C 0 C 0 s aotNan1.NW_018494782v1 1539741 50 - 1813869 ggagtaggttcgttagtt----gcaggtgggtgaggattttatcttcagATCTC i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10973424 2113 - 12073884 I e cebCap1.NW_016107695v1 1292472 2996 - 2164891 I e dasNov3.JH569188 609426 10924 + 760995 I e canFam3.chr1 56204890 2167 + 122678785 I a score=3094772.000000 s hg38.chr6_KB021644v2_alt 141312 350 + 185823 ATGCCATACTTGTTTACTCATT--------------AGCatatttcaaaatttttcttatctaaatgtacctatatttgagaatatttctatgtcttcatgtttatcag--tttttttttcttctgtaacatgtgatcttccataaat-cccacccagtacagttttcatctcaaattattgttttcacttctggtaatctgatttggg-cctttttgaaatcttccatctctcttcttagctttttgaacacatagagcatagttaca--ataatgattttaatcatcttatctgctatttgt-tcatttttatcaactgtggatgagtt---atgatctccttttctct--gcatcataaaacatgttttcttg s panTro5.chr6 173597981 361 + 175400573 ATGCCATATTTGTTtactcatt-tt--tttatcattagcatatttcaaaatttttcttatcta--tgtatctatctttgagaatatttctatgtcttcatgtttatcag--tttttatttcttctgtaacatgtgatcttccataaat-cccacccagtacagttttcatctcaaattattgttttcacttctggtaatctgatttggg-cctttttgaaatcttccatatctcttcttagctttttgaacacatagagcatagttaca--ataatgattttaatcatcttatctgctatttgt-tcatttttatcaactgtggatgagtt---atgatccccttttctctctgcatcataaaacatgttttcttg i panTro5.chr6 C 0 C 0 s panPan2.chr6 171831021 360 + 173848474 ATGCCATACTTgtttactcattttt--tttatcattagcatatttcaaaatttttcttatcta--tgtatctatctttgagaatatttctatgtcttcatgtttatcag--tttttttttcttctgtaacatgtgatcttccataaat-cccacccagtacagttttcatctcaaattattgttttcacttctggtaatctgatttggg-cctttttgaaatcttccatatctcttcttagctttttgaacacatagagcatagttaca--ataatgattttaatcatcttatctgctatttgt-tcatttttgtcaactgtggatgagtt---atgatctccttttctct--gcatcataaaacatgttttcttg i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11514248 364 - 12463322 ATGCCATACTTgtttactcattttt--tttatcattagcatatttcaaaatttttcttacctaaatgtatctatctttgagaatatttctatgtcttcatgtttatcaggttttttttttcttctgtaacatgtgagcttccataaat-cccacccagtacagttttcatctcaaattattgttttcacttctggtaatctgatttggg-cctttttgaaatctttcatatctcttcttagctttttgaacacatagagcatagttaca--ataatgattttaatcatcttatctgctatttgt-tcatttttatcaactgtggatgagtt---atgatctccttttctct--gcatcataaaacatgttttcttg i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156343696 360 + 157873769 ATGCCATACTTGTTGACTCATT-TT--TTTATCATTAGCATATTGCAaaatttttcttacctaaatgtatctatctttgagaatatttctatgtcttcatgtttttcag--gttttttttcttctgtaacatgtgatcttccataaat-cccacccagtagagttttcatctcaaattattgttttcacttctggaaatctgatttggg-cctttttgaaatcttccatatctcttcttacctttttaaacacatagagcatagttaca--at-atgattttaatcatcttatctgctatttgt-acatttttatcgactgtggatgagtt---ctgatcgccttttctct--gcatcataaaacacgttttcttg i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170369753 364 + 172585720 ATGCCATATTTCTTTACCCATTTTT--TAAATCATTAGCatatttcaaaacttttcttatctaaatgtatctatctttgagaatatttctatatctccatgtttatcaggttttttttttcttctgtaacgtgtgatcttccataaat-cccacccagcagagttttcatctcaaaatattgttttctcttctggaaatttgatttggg-cctttttgaaatcctccatatctcttcttagctttttgaacacatggagcacagttatg--ataatgtttttaatcatcttatctgctatctgt-acatttttatcaattgtggaggagtt---ctgatcgccttttgtct--gcatcataaaacacattttcttg i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169115054 363 - 170955103 ATGCCATATTTCTTTACCCATTTTT--AAAATCATTAGCatatttcaaaacttttcttatctaaatgtatctatctttgagaatatttctatatctccatgtttatcagg-tttttttttcttctgtaacgtgtgatcttccataaat-cccacccagcagagttttcatctcaaaatattgttttctcttctggaaatttgatttggg-cctttttgaaatcctccatatctcttcttagctttttgaacacatggagcacagttatg--ataatgtttttaatcatcttatctgctatctgt-acatttttatcaattgtggaggagtt---ctgatcgccttttgtct--gcatcataaaacacaatttcttg i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8401241 363 + 10161646 ATGCCATATTTCTTTACCCATTTTA--AAAATCATTAGCatatttcaaaacttttcttatctaaatgtatctatctttgagaatatttctatatctccatgtttatcagg-tttttttttcttctgtaacgtgtgatcttccataaat-cccacccagcagagttttcatctcaaaatattgttttctcttctggaaatttgatttggg-cctttttgaaatcctccatatctcttcttagctttttgaacacatggagcacagttatg--ataatgtttttaatcatcttatctgctatctgt-acatttttatcaattgtggaggagtt---ctgatcgccttttgtct--gcatcataaaacacattttcttg i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1432800 363 + 3144229 ATGCCATATTTCTTTACCCATTTTT--AAAATCATTAGCatatttcaaaacttttcttatctaaatgtatctatctttgagaatatttctatatctccatgtttatcagg-tttttttttcttctgtaacatgtgatcttccataaat-cccacccagtagagttttcatctcaaagtattgttttctcttctggaaatttgacttggg-cctttttgaaatcttccatatctcttcttagctttttgaacacatggagcacagttatg--ataatgattttaatcatcttttctgctatctgt-acatttttatcaattgtggaggagtt---ctgatcgccttttgtct--gcatcataaaacacattttcttg i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96718819 363 + 98384682 ATGCCGTATTTCTTTACCCATTTTT--TAAATCATTAGCatatttcaaaacttttcttatctaaatgtatttatctttgagaatatttctgtatctccatgtttatcagg-tttttttttcttctgtaacatgtgatcttccataaat-cccacccagtagagttttcgtctcaaagtattgttttcacttctggaaatttgatttggg-cctttttgaaatcttccatatctcttcctagctttttgaacacatggagcacagttatg--ataatgattttaatcatcttatctgctatctgt-acatttttatcaattgtggaggagtt---ctgatcgccttttgtct--gcatcataaaacacattttcttg i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8255143 364 - 10857215 ATGCCATATTTCTTTACCCATTTTT--AAAATCGTTAGCatatttcaaaacttttcttatctaaatgtatctatctttgagaatatttctatatctccatgtttatcaggttttttttttcttctgtaacatgtgatcttccataaat-cccacccagtagagttttcatctcaaagtattgttttcacttctggaaatttgatttggg-cctttttgaaatcctccatatctcttcttagctttttgaacacatggagcacagttatg--ataatgattttaatcatcttatctgctatctgt-acatttttatcaattgtggaggagtt---ctgatcgccttttgtct--gcatcataaaacacattttcttg i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15644316 364 - 23502949 ATGCCATATTTCTTTACCCATTTTTTAAAAATCATTAGCatatttcaaaacttttcttatctcaatgtatctatctttgagaatatttctatgtcttcacgtttatcagg--ttttttctcttctgtaacatgtgatcttccataaat-cccacccagtagagttttcatctcaaattattgtttttacttctgaaaatttgatttggg-cctttttgaaatcttccatatctcttcttagctttttgaacacatggagtatagttgta--ataatgattttaatcatcttatctgctatctgt-acatttttatcaattgtggatgaggt---ctgatcgccttttctct--gcatcataaaacacgttttcgtg i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169929000 354 + 171630274 ATGCTGTGCTTGTTtgctctttttt-----atcattagcatatt-tagaacttttcttatccaaatgtgtctgtctttgagaatatttctatgtcttcgtgtctatcagt----ctttttcttctgtaac--gtgatcttccaggaatccccacctagtagagttttcatcccaaattattgctttcacttctgg-aatctgatctggg-cctttttgaaatcttgcgtgtttcttcttagctttctggacacacagaacacaattaca--ataataattttaatcatcttatctgctatttgt-acatttttatcaattgtggatgaatc---ctgatcgccttttctct--acatcataaaacaggttttcctg i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1329683 353 - 2905041 aTGCTGTGTTTGTTtgctcattttt-----atcgttagcatatt-caaaatttttcttatccaaatg----tgtctttgagaatatttc--tgtcttcatgtctatcagt-ttcttttttcttctgtaacatgtgatcttccatggatccccacctagtagagttttcatcccaaattattgttttcacttctgg-aatctgatttggg-cctttttgaaatcttccatatctcttcttagcttttggggcacacggaacacagttaca--ataatgattttaatcatcgtatctgctatttgt-acatttttattagttgtggatgaatc---ctgattgccttttctct--acatcatgaaacaggttttcttg i saiBol1.JH378287 C 0 C 0 s aotNan1.NW_018494782v1 1539791 358 - 1813869 ATGCCGTGTTCGTTtgctcattttt-----atcattagcatatt-caaaatttttcttatccaaatgtgtctatctttgagaatatttctatgtcttcatgtctatcagt--tcttttttcttctgtaacatgtgatcttccatgaatccccacctagtagagttttcatcccaaattattgttttcacttctgg-aatctgatttggg-cctttttgaaatcttccatgtctgttcttagctgtttggacacatggaacacagttaca--ataatgattttaatcatcttatctgccatttgt-gcatttttatcaattgtggatgaatc---ctgatcgccttttctct--acatcataaaacaggttttcttg i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10975537 354 - 12073884 ATATCTTATTTGTTTCCTGAGTTTT----TATCATTAGCATATTTCAAAATTTTTCTTATCCAAATGTCTCTGTCCTTTAGCATG-TTAtgtgtcttcaagtttattaac----ttttttcttctgtaatatgta--ctcccattaat-cccacccagtggaattttcatctcatattcttgtttttgattctagaaatctgatttgggtctttttttatattttctgtgtctctactcaactctttgaacacatgg-----agttacattatgatgacttttatcatcttatctgctatttgtaacccttttatcaattctaggcaagtctaactaatttatttttctcc--acattatgg---atgttttcttg i otoGar3.GL873575 I 2113 C 0 e cebCap1.NW_016107695v1 1292472 2996 - 2164891 I e dasNov3.JH569188 609426 10924 + 760995 I e canFam3.chr1 56204890 2167 + 122678785 I a score=1608643.000000 s hg38.chr6_KB021644v2_alt 141662 171 + 185823 cttctcttgatgtctggtaatttttgtctcagagctagacatagtt-atttttcttctt----at-gggacatgtttgccatccta------ttcttgagcttttctgggagagacagtaagttacttgaaagcagtttgattctgagccatttgagttttgctttttatatattttaggaga s panTro5.chr6 173598342 175 + 175400573 cttctcttgaagtctggtaatttttgtctcagagctagacatagtt-atttttcttcttgggtat-gggacatgtttgccatccta------ttcttgagcttttctgggagagacagtaagttacttgaaagcagtttgattctgagccatttgagttttgctttttatatattttaggaga i panTro5.chr6 C 0 C 0 s panPan2.chr6 171831381 175 + 173848474 cttctcttgatgtctggtaatttttgtctcagagctagacatagtt-atttttcttcttgggtat-gggacatgtttgccatccta------ttcttgagcttttctgggagagacagtaagttacttgaaagcagtttgattctgagccatttgagttttgctttttatatattttaggaga i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11514612 175 - 12463322 cttctcttgatgtctggtaatttttgtctcagagctaaacacagtt-atttttcttcttgggtat-gggacatgtttgccatccta------ttcttgagcttttctgggagagacagtaagttacttgaaagcagtttgattctgagccatttgagttttgctttttatatattttaggaga i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156344056 171 + 157873769 cttctcttgatgtctggtaatttttgtctcagtgctagacattgtt-atttttcttattggatat-gggacatgtttaccacccta------ttcttgagcttttctgggagagac----agttacttgaaagcagtttgattctgagccatttgagttttgctttttatatattttaggaga i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170370117 176 + 172585720 cttctcttgatgtctggtaatttttgtctcagtgctagacatagtt-atttttcttattgggtatggggacatgtttgccatccta------ttcttgagcttttctgggagaggcggtaagttacttgaaagcaatttgattctgagccatttgagttttgctttgtatatatcttaggaga i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169115417 176 - 170955103 cttctcttgatgtctggtaatttttgtctcagtgatagacatagtt-atttttcttattgggtatggggacatgtttgccatccta------ttcttgagcttttctgggagaggcggtaagttacttgaaagcaatttgattctgagccatttgagttttgctttgtatatatcttaggaga i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8401604 176 + 10161646 cttctcttgatgtctggtaatttttgtctcagtgatagacatagtt-atttttcttattgggtatggggacatgtttgccatccta------tttttgagcttttctgggagaggcggtaagttacttgaaagcaatttgattctgagccatttgagttttgctttgtatatatcttaggaga i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1433163 176 + 3144229 cttctcttgatgtctggtaatttttgtctcagtgctagacatagtt-atttttcttattgggtatggggacatgtttgccatccta------ttcttgagcttttctgggagaggcggtaagttacttgaaagcagtttgattctgagccatttgagttttgctttgtatatattttaggaga i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96719182 176 + 98384682 cttctcttgatgtctggtaatttttgtctcagtgctagacatagtt-atttttcttattgggtatggggacatgtttgccatccta------ttcttgagtttttctgggagaggcggtaagttacttgaaagcaatttgattctgagccatttgagttttgctttttatatattttaggaga i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8255507 176 - 10857215 cttctcttgatgtctggtaatttttgtctcagtgctagacatagtt-atttttcttattgggtatggggacatgtttgccatccta------ttcttgagcttttctgggagaggcggtaagttacttgaaagtagtttgattctgagccatttgagttttgctttgtatatatttcaggaga i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15644680 175 - 23502949 cttctcttgatgtctggtaatttttgtctcagtgctagacatcgtt-atttttcttactgggtac-gggacatgtttgtgatcctg------ttcttgagcttttctgggagaggcagtaagttacttgaaagcaatttgattccgaggcatttgagttttgctttttatatattttaggaga i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169929354 172 + 171630274 cttctcttgatgcctggtgatttttgtctgggtgctggac--agtt-acttttcttactgggtgt-gggacacgtttgtcacgctg-------tcttcagcttttcttggagaggcacagagttacttgaaagcagtttgattctgagcctttcgagttttgcttttcatatattttaggaca i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1330036 169 - 2905041 cttctcttgaggcctggtgatttttgtgtgtgtg-tagacagagtt-atttttcttattgggtat-gggacatgtttgtcatgctc-------tcttgagcttttcttggagagt----aagttacttgaaagcagtttgattctgagccttttgagttttgcttttTATGGACTTTAGGAGA i saiBol1.JH378287 C 0 M 812 s aotNan1.NW_018494782v1 1540149 173 - 1813869 cttctcttgatgcctggtgatttttgtctgggtgctagacagagtt-atttttcttcttgggtat-gggacatgtttgtcatgcta-------tcttgagcttttcttggagaggcagtaagttacttgaaagcagtttga-tctaagccttttgagttttgctttttatatattttaggaga i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10975891 176 - 12073884 ctgctttgggtatctaataatttttggttgggtgctaggcattgtcaatttttcttactggatac-tgaacatttttatactagtg------gttttgagttctgctcaggtaaacagtaagtttcttgtaagtagtcttattgtgattcttttaaatcttgtttttcataatttttaggtga i otoGar3.GL873575 C 0 C 0 s dasNov3.JH569188 620350 182 + 760995 ctgctccctatgtctggtgattttttattGCATTCCAGACTTTTTTTttttttctaattgggtca-tgggagtttttgtattcttataaatattcttgagctttgttaaggaatgtagcaagttagttagaagcagtttgattctgatctttttgggtcttgcttttaagatttgttgggtga i dasNov3.JH569188 I 10924 C 0 e cebCap1.NW_016107695v1 1292472 2996 - 2164891 I e canFam3.chr1 56204890 2167 + 122678785 I a score=2021476.000000 s hg38.chr6_KB021644v2_alt 141833 251 + 185823 ------gaccagagcagtgctttgtccagcccttgata-tttcccccagctgggcaaa---cccctt--gtgcagcctctccaatgggctgtg-cttctgaggcctt-----tctgactagtgggaaaaggcaccattccaggcctgggtgagctgtgggcagtgtt-tctctcaatcctt-----ccagatggttctctccctgggagtaac-taccttggcctcagatggttttttcccgtaggcacatgctgattaatattctgttgaatgct s panTro5.chr6 173598517 250 + 175400573 ------gaccagagcagtgctttgtccagccct-gata-tttcccccagctgggcaaa---cccctt--gtgcagcctctccaatgggctgtg-cttctgaggcctt-----tctgactagtgggaaaaggcaccattccaggcctgggtgagctgtgggcagtgtt-tctctcaatcctt-----ccagatggttctctccctgggagtaac-taccttggcctcagatggttttttcccgtaggcacatgctgattaatattctgttgaatgct i panTro5.chr6 C 0 C 0 s panPan2.chr6 171831556 250 + 173848474 ------gaccagagcagtgctttgtccagcccc-gata-tttcccccagctgggcaaa---cccctt--gtgcagcctctccaatgggctgtg-cttctgaggcctt-----tctgactagtgggaaaaggcaccattccaggcctgggtgagctgtgggcagtgtt-tctctcaatcctt-----ccagatggttctctccctgggagtaac-taccttggcctcagatggttttttcccgtaggcatatgctgattaatattctgttgaatgct i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11514787 249 - 12463322 ------gaccaaagcagtgctttgtccagccct-gata-ttt-ccccagctgggcaaa---cccctt--gtgcagcctctccaatgggctgtg-cttctgaggcctt-----tctgactagtgggaaaaggcaccattccaggcctgggtgagctgtgggcagtgtt-tctctcaatcctt-----ccaggtggttctctccctgggagtaac-taccttggcctcagatggttttttcccataggcacatgctgattaatattctgttgaatgct i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156344227 249 + 157873769 ------gaccagagcagtgctttctccagccct-gata-tttcccccagctgggcaaa---cccctt--gtgcagcctctccaatggacggtg-cttctgaggcctt-----tctgactagtgggaaaaggcaccattccaggcctgggtgagctgtgggcagcatt-tctctcagtcctt-----ccagatggttctctctctgggagtaac-taccttggcctcagatgg-tttttcccataggcatatgctgatcaatattctgttgaatgct i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170370293 249 + 172585720 ------gaccagagctgtgctttgtccagcccc-gata-tttcccccagctgggcaaa---cccctt--gtgcaacctctccaatgggctgtg-cttctgaggcctt-----tctgactagtgggaaaaggcaccattccaggcctgggtgagctgtgggcactgtt-tctctcaatcctt-----ccagatggttccctccctgggagtaac-taccttggcctcaggtgg-tttttcccataggcatgtgctgatcaatattctattgaatgct i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169115593 249 - 170955103 ------gaccagagctgtgctttgtccagcccc-gata-tttcccccagctgggcaaa---cccctt--gtgcaacctctccaatgggctgtg-cttctgaggcctt-----tctgactagtgggaaaaggcaccattccaggcctgggtgagctgtgggcactgtt-tctctcaatcctt-----ccagatggttccctccctgggagtaac-taccttggcctcaggtgg-tttttcccataggcatgtgctgatcaatattctattgaatgct i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8401780 249 + 10161646 ------gaccagagctgtgctttgtccagcccc-gata-tttcccccagctgggcaaa---cccctt--gtgcaacctctccaatgggctgtg-cttctgaggcctt-----tctgactagtgggaaaaggcaccattccaggcctgggtgagctgtgggcactgtt-tctctcaatcctt-----ccagatggttccctccctgggagtaac-taccttggcctcaggtgg-tttttcccataggcatgtgctgatcaatattctattgaatgct i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1433339 249 + 3144229 ------gaccagagccgtgctttgtccagcccc-gaca-tttcccccagctgggcaaa---cccctt--gtgcagcctctccaatgggctgtg-cttctgaggcctt-----tctgactagtgggaaaaggcaccattccaggcctgggtgagctgtgggcactgtt-tctctcaatcctt-----ccagatgattccctccctgggagtaac-taccttggcctcaggtgg-tttttcccgtaggcatgtgctgatcaatattctactgaatgcc i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96719358 249 + 98384682 ------gaccagagccgtgctttgtccagcccc-gata-tttcccccagctgggcaaa---cccctt--gtgcagcctctccaatgggctgtg-cttctgaggcctt-----tctgactagtgggaaaaggcaccattccaggcctgggtgagctgtggtcactgtt-tctctcaatcttt-----ccagatggttccctccctgggagtaac-taccttggcctcaggtgg-tttttcccgtaggcatgtgctgatcaatattctattgaatgct i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8255683 249 - 10857215 ------gaccagagccgtgctttgtccagcccc-gaca-tttcccccagctgggcaaa---cccctt--gtgcagcctctccaatgggctgtg-cttctgaggcctt-----tctgactagtgggaaaaggcaccattccaggcctgggtgagctgtgggcactgtt-tctctcaatcctt-----ccagatggttccctccctgggagtaac-taccttggcctcaggtgg-tttttcccgtaggcatgtgctgatcaatattctactgaatgcc i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15644855 249 - 23502949 ------gaccagagcagggctttgtccagcccc-gaca-tttcccccagctgggcaaa---cccctt--gtgcagcctctccaatgggctgtg-cttctgaggcctt-----tctgactagtgggaaaaggcaccattccaggcccgggtgagctgtgggcactgtt-tctctcaatcctt-----ccagatggttccctccctgggagtaac-taccttggcctcaggtgg-tttttcccataggcatgtgctgatcaatattctattgaatgct i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169929526 250 + 171630274 ------tcccagagcagtgcttcatccagccct-gatattttcccccagctgggcaag---accttt--gtgcagcctctgcagtgggctgtg-cttctgaggcctt-----tctgactattgggaaaaggtaccgttccaggcccgggtgagctctgggcactgtt-tctctcagtcctt------cagatggttctttccctgggaatagattaccgtggcctcaggtgg-tttttcccacaggcgtgtgctgatcaatattctgttgaatgtt i calJac3.chr4 C 0 C 0 s aotNan1.NW_018494782v1 1540322 235 - 1813869 ------gcccagagcagtgctttgtccagccct-gata-tttcccccagctggtcaag---cccctt--gtgcagcctctgcagt----------------ggcctt-----tctgactagtgggaaaaggtaccattccaggcctgggtgagctctgggcactgttgtctctcaatcctt-----ccagacggttctttccctgggaataaa-taccgtggcctcaggtgg-tttttcccacaggcatgtgctgatcaatattctgttgaatgct i aotNan1.NW_018494782v1 C 0 I 176 s otoGar3.GL873575 10976067 226 - 12073884 -----------taacagagctctggttaacctt-aata-ctcccccctgctggggtaagatcctcct--gtgtggtctctacgatgtcctgtgaatcctgaggcttt--cagcctgatgactgggaa---------ctccaggccctgg-------tgggcagtatt-tctcataactctg-----ggggatggtt-tttccgtgggagtaac-tgtcttggcctcagatac-ttcctcaca----catgagcccacc-atattttattggat--- i otoGar3.GL873575 C 0 C 0 s dasNov3.JH569188 620532 250 + 760995 gaaaagtctaagagtaattttttttttaaacct---ta-ctg---------gagcaag---acctttccatgtagtctctccaatgtcctatg-atccatgagctttttcagtctggctggtagaagccagcactatt-----tctgggtgacccccgagaactat--tatctctacccattaaggtcaggtgtttccttccttaggaaatct-taaccaagacttgggtag-tctcattgaaatgaatgtgctgatcagtactctgcttaatgct i dasNov3.JH569188 C 0 C 0 e saiBol1.JH378287 1330205 812 - 2905041 M e cebCap1.NW_016107695v1 1292472 2996 - 2164891 I e canFam3.chr1 56204890 2167 + 122678785 I a score=91584.000000 s hg38.chr6_KB021644v2_alt 142084 17 + 185823 gcaggattacgctggg----------c s panTro5.chr6 173598767 17 + 175400573 gcaggattacgctggg----------c i panTro5.chr6 C 0 C 0 s panPan2.chr6 171831806 17 + 173848474 gcaggattacgctggg----------c i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11515036 17 - 12463322 gcaggattacgctggg----------c i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156344476 17 + 157873769 gcaagattaccctcag----------c i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170370542 27 + 172585720 gcaggattaccctgggaagatcaggac i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169115842 27 - 170955103 gcaggattaccctgggaagatcaggac i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8402029 27 + 10161646 gcaggattaccctgggaagatcaggac i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1433588 27 + 3144229 gcaggattaccctgggaagatcaggac i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96719607 27 + 98384682 gcaggattaccctgggaagatcaggac i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8255932 27 - 10857215 gcaggattaccctgggaagatcaggac i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15645104 27 - 23502949 gcaggattaccctgggaagatcaggac i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169929776 26 + 171630274 -caagattaccctgcacaggtcagggc i calJac3.chr4 C 0 C 0 s otoGar3.GL873575 10976293 12 - 12073884 -----attccacaggag---------- i otoGar3.GL873575 C 0 C 0 s dasNov3.JH569188 620782 17 + 760995 ccaagggtaccatgta----------c i dasNov3.JH569188 C 0 C 0 e saiBol1.JH378287 1330205 812 - 2905041 M e aotNan1.NW_018494782v1 1540557 176 - 1813869 I e cebCap1.NW_016107695v1 1292472 2996 - 2164891 I e canFam3.chr1 56204890 2167 + 122678785 I a score=292371.000000 s hg38.chr6_KB021644v2_alt 142101 37 + 185823 agatcagtggagttctcattctg--gctctctcatctca s panTro5.chr6 173598784 37 + 175400573 agatcagtggagttctcattctg--gctctctcatctca i panTro5.chr6 C 0 C 0 s panPan2.chr6 171831823 37 + 173848474 agatcagtggagttctcattctg--gctctctcatctca i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11515053 37 - 12463322 agatcagtggagttctcattctg--gctctctcatctca i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156344493 37 + 157873769 aaatcagtggagctctcattcta--gctctctcatctca i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170370569 37 + 172585720 agatcagtggagttctcattcca--gctctctcatctca i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169115869 37 - 170955103 agatcagtggagttctcattcca--gctctctcatctca i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8402056 37 + 10161646 agatcagtggagttctcattcca--gctctctcatctca i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1433615 37 + 3144229 agatcagtggagttctcactcca--gccttctcatctca i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96719634 37 + 98384682 agatcagtggagttctcattcca--gctctctcatctca i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8255959 37 - 10857215 agatcagtggagttctcactcca--gccctctcatctca i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15645131 37 - 23502949 agatcagtggagttctcactcca--gctctctcgtctca i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169929802 37 + 171630274 aggtgagtggggttctcgctcca--actctgtcgtcctg i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1295468 36 - 2164891 AGATCAGT-gggttctcactcca--gctctctcatcctg i cebCap1.NW_016107695v1 I 2996 C 0 s otoGar3.GL873575 10976305 37 - 12073884 tctttggcaaggttctcactctgt-gcagtctcatttc- i otoGar3.GL873575 C 0 C 0 s dasNov3.JH569188 620799 39 + 760995 agatcagtgtaattttcactctgtggctctctcatttct i dasNov3.JH569188 C 0 C 0 e saiBol1.JH378287 1330205 812 - 2905041 M e aotNan1.NW_018494782v1 1540557 176 - 1813869 I e canFam3.chr1 56204890 2167 + 122678785 I a score=2146644.000000 s hg38.chr6_KB021644v2_alt 142138 245 + 185823 gggactcactccagtagcctgcgtagccccttcggtcttcctgaggcctcagctctgcctcctctgctcagggagtcaccagggttcttctcggtttcctcctgtctgggctgtggcct-ggaaccccctcaaagcagcacctttgggccattgt--ggggctca-gtgttttt--tactgcactctctcatggg-tcactgccctttgttgctc----catgtccagtgtctcaaaagc--cat--ttt-aaatagattc s panTro5.chr6 173598821 245 + 175400573 gggactcactccagtggcctgcgtagccccttcggtcttcctgaggcctcagctctgcctcctctgctaagggagtcaccagggttcttcttgctttcctcctgtctgggctgtggcct-ggaaccccctcaaagcagcacctttgggccattgt--ggggctca-gtgttttt--tactgcactctctcatggg-tcactgccctttgttgctc----catgtccagtgtctcaaaagc--cat--ttt-aaatagattc i panTro5.chr6 C 0 C 0 s panPan2.chr6 171831860 245 + 173848474 gggactcactccagtggcctgcgtagccccttcggtcttcctgaggcctcagctctgcctcctctgctcagggagtcaccagggttcttctcggtttcctcctgtctgggctgtggcct-ggaaccccctcaaagcagcacctttgggccgttgt--ggggctca-gtgttttt--tactgcactctctcatggg-tcactaccctttgttgctc----catgtccagtgtctcaaaagc--cat--ttt-aaatagattc i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11515090 244 - 12463322 gggactcactccagtggcctgcgtag-cccttcggtcttcctgagggctcagctctgcctcctctgctcagggagtcaccagggttcttctcggtttcctcctgtctgggctgtggcct-ggaaccccctcaaagcagcacctttgggccattgt--ggggctca-gtgttttt--tactgcactctctcatggg-tcactgccctttgttgctc----catgtccagtgtctcaaaagc--cat--ttt-aaatagattc i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156344530 245 + 157873769 gggactcactccagtggcctgtgtagcccctttggtcttcctgaggcctcagctctgcctcctatgctcaaggagtcaccagggttcttctctgtttcctcctgtctgggctgtggcct-ggaaccccctcaaagcagcacctttgggccattgt--gggactca-gtgttttt--tacttcacgctctcatggg-tcactgccctttgttgctg----catgtccagtgtctcaaaagc--cat--ttt-agatatattc i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170370606 244 + 172585720 gagactcactccagtggcctgcgtagccccttcggtcttcctgaggcctcagctctgcctcctccgctcagggagtcacca-ggttcttctcggtttcctcccgtctgggctgtggcct-ggaaccccctcaaagcagcacctttgggccattgt--ggggctca-gtgttttt--tgctttactctgtcatggg-tcactgtcctttgttgctc----catgtccagtgtctcaaaagc--cat--ttt-aaatagattc i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169115906 244 - 170955103 gagactcactccagtggcctgcatagccccttcggtcttcctgaggcctcagctctgcctcctccgctcagggagtcacca-ggttcttctcggtttcctcccgtctgggttgtggcct-ggaaccccctcaaagcagcacctttgggccattgt--ggggctca-gtgttttt--tgctttactctgtcatggg-tcactgtcctttgttgctc----catgtccagtgtctcaaaagc--cat--ttt-aaatagattc i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8402093 244 + 10161646 gagactcactccagtggcctgcatagccccttcggtcttcctgaggcctcagctctgcctcctccactcagggagtcacca-ggttcttctcggtttcctcccgtctgggctgtggcct-ggaaccccctcaaagcagcacctttgggccattgt--ggggctca-gtgttttt--tgctttactctgtcatggg-tcactgtcctttgttgctc----catgtccagtgtctcaaaagc--cat--ttt-aaatagattc i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1433652 244 + 3144229 gagactcactccagtggcctgcgtagcccctttggtcttcctgaggcctcagctctgcctcctcctctcagggagtcacca-ggttcttctcggtttcctcccgtctgggctgtggcct-ggaaccccctcaaagcagcacctttgggccattgt--ggggctca-gtgctttt--tgctttactctctcatggg-tcactgtcctttgtagctc----catgtccagtgtctcaaaagc--cat--ttt-aaatagattt i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96719671 245 + 98384682 gagactcactccagtggcctgcgtagccccttcggtcttcctgaggcctcagctctgccttttccactcagggagtc-cca-ggttcttctcggtttcctcccgtctgggctgtggcct-ggaaccccctcaaagcagcacctttgggctgttgtgggggggtca-gtgctttt--tgctttactctctcataag-tcactgtcctttgtggctc----catgtccagtgtctcaaaagc--cat--ttt-aaatagattc i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8255996 244 - 10857215 gagactcactccagtggcctgcgtagccccttcggtcttcctgaggcctcagctctgcctcctcctctcagggagtcacca-ggttcttctcggtttcctcccgtctgggctgtggcct-ggaaccccctcaaagcagcacctttgggccattgt--ggggctca-gtgctttt--tgctttactctctcatggg-tcactgtcctttgtggctc----catgtccagtgtctcaaaagc--cat--ttt-aaatagattt i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15645168 244 - 23502949 gagactcactccagtggcctgcgtagcccctttggtcttcctgaggcctcagctctgcctcctccgctcagggagtcacca-ggttcttctcgatttcctcccatctgggctgtggcct-ggaaccccctcaaagcagcacctttgggccattgt--ggggctca-gtgatttt--tgctttactctctcatggg-tcactgacctttgttgctc----catgtccagtgtctcaaaagc--cat--ttt-aaatagattc i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169929839 245 + 171630274 gggactcactccagtggcctgtctagccctttccatcttcctgaggcctcaactctgcctcctccactcagggagtcaccagggctcttct--gtttcctcctgcctggtctgtggcct-ggaaccccctcacagcagcatctgtgggccattgt--ggggctcc--tgtttttaaaaatttattctctcatggg-tcactggtctttgttgctc----tgtgtctggtgtctcaaaagc--cat--ttttaaatagattc i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1295504 236 - 2164891 gggactcactccagtggcctgtgtagccccgtccatcttcctgatgcctcgactctgcctcctctgctcagggagtcaccagggctcttct--gtttcctcttgcctgggttgtggcct-ggaaccccctcacagcagcatctgtgggccattgt--ggggctcc--tgttttt--aaatttattctctcatggg-tcactggcctttgttgctc----tgtgtctg-------aaaagc--cat--ttttaaatagattG i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1540733 243 - 1813869 gggactcactccagtggcctgtgtagccccttccatcttcctgaggcctcgactctgcctcctccgctcagggagtcaccagggctct--t--gtttcctcctgcctgggctgtggcct-ggaaccccctcacagcagcatctgcgggccattgt--ggggctgc--tgtttttttaaatttattctctcatggg-tcactggcctttgttgctc----cgtgtccggtgtctcaaaagc--cat--tttcagatagattc i aotNan1.NW_018494782v1 I 176 C 0 s otoGar3.GL873575 10976342 206 - 12073884 ----------------------tcaggccctttggtcttgctgaaatctcaactccaccttctcacctcagggaatcctttgggctgt-------------------gtgttgtggcctgggagccttctgagggctgtgact--gggaagttgt--aggacttgtgcctgtct--cctctctctctctcacagg-tcaccatccttcctttctc----aatgcccagagccttgaaatcatcat--ttt-atatattttt i otoGar3.GL873575 C 0 C 0 s dasNov3.JH569188 620838 233 + 760995 ggtgtttggtcctttgaactatgtagatacttttttctctctggattcacagaacaattttcttaactcagactgttaaatgggctctttctgggcatccctcttctgtgctgtagcct-ggaaactctt------------tctaggctatgag--tgggctca-------ct--ttatttcccatctcttgggatcactg-cctttgttgctcgtttgatgtccagtgccttaaaaac--catcattt-ctttatattt i dasNov3.JH569188 C 0 C 0 e saiBol1.JH378287 1330205 812 - 2905041 M e canFam3.chr1 56204890 2167 + 122678785 I a score=6793246.000000 s hg38.chr6_KB021644v2_alt 142383 765 + 185823 catccctcttttggtaggagatggattaaatccctttcatacac------ttgaagcagaagtTATCCACTGGTATATATTTGCATATGTGTTC-----TTCCTACCGGTTTTATCGAATGTATCCGAA-TCATGAATGCCGTGTG-AGTCACACATTGTGAATCATGAACT-TAG-TGATGGCCAAGTAATAGGTTCTCACACAGCCAACATGAGGTTGGTGGTAAAGTCAAGGCCTCAGAAGTCTAAAGTTAACACACCACTACTTTTATGACCAGCAGAGACTGCTCAAAACGTTCCTA-------acaatcacaaccacaacca----caacaac------aagacaaacctacaaGTAGTCATCTAATTATTTTTCTGGAGTTTTAATACTACGACAACATTTAATGACTTTCTCTGTCTTAAGCAGAGGGTTGGGAAGTGATGCAGAATTTATCATTGGGATATGAGGTTTGTGCAAATCGTATGGAGTGTGATGGA--------GGTTG-----TGGAGGCAAGCAGGCCAGATTTGGGCCCGAACTCTGCATT----CCATGAAgtgggactttggtggagt---cataaaacatcaataagcttccactt-------cttttctgcaaatatagc-------------------------------------------------------------------------------agtattgcctgccatgcaaggctgttgcaaacactgag-aaaatatataaatctcctatacagtAAGATCTCTAACAATGTTAACTACTACTG--AATAATATTGCTATTGATTTAATATT-----------TAATACTATCGCTAT----------------------------------------TTTATTTGT---------------------------------AATATTGCCATTATTTATAATT----------------TTATTACTAATAATCA s panTro5.chr6 173599066 762 + 175400573 catccctcttttggtaggagatggattaaatccctttcatacac------ttgaagcagaagttatccactagtatatattTGCATATGTGTTC-----TCCCTACCGGTTTTATCAAATGTATCCGAA-TCATGAATGCCGTGTG-AGTCACACATTGTGAGTCATGAACT-TAG-TGATGGCCAAGTAATAGGTTATCAGACAGCCAACATGAGGTTGGTGGTAAAGACAAGGCCTCAGAAGCCTAAAGTTAACACACCTCTACTTTTATGACCAGCAGAGACTGCTCAAAACGTTCCTA-------acaatcacaaccacaacca----caacaac------aagacaaacctacaaGTAGTCATCTAATTATTTTTCTGGAGTTTTAATACTACGACA---TTTAATGACTTTCTCTGTCTTAAGCAGAGGGTTGGGAAGTGATGCAGAATTTATCATTGGGATATGAGGTTTGTGCAAATCGTATGGAGTGTGATGGA--------GGTTG-----TGGAGGCAAGCAGGCCAGATTTGGGCCCGAACTCTGCATT----CCACGAAgtgggactttggtggagt---cataaaacatcaataagcttccactt-------tttttctgcaaatatagc-------------------------------------------------------------------------------agtattgcctgccatgcaaggctgttgcaaacactgag-aaaatatataaatctcctatacagtAAGATCTCTAACAATGTTAACTACTACTG--AATAAtattgctattgatttaatatt-----------tagtactattgctat----------------------------------------tTTATTTGT---------------------------------AATATTGCCATTATTTATAATT----------------TTATTACTAATAATCA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171832105 765 + 173848474 catccctcttttggtaggagatggattaaatccctttcatacac------ttgaagcagaagttatccactagtatatattTGCATATGTGTTC-----TCCCTACTGGTTTTATCGAATGTATCCGAA-TCATGAATGCCCTGTG-AGTCACACATTGTGAATCATGAACT-TAG-TGATGGCCAAATAATAGGTTATCAGGCAGCCAACATGAGGTTGGTGGTAAAGACAAGGCCTCAGAAGCCTAAAGTTAACACACCTCTACTTTTATGACCAGCGGAGACTGCTCAAAACGTTCCTA-------acaatcacaaccacaacca----caacaac------aagacaaacctacaaGTAGTCATCTAATTATTTTTCTGGAGTTTTAATACTACGACAACATTTAATGACTTTCTCTGTCTTAAGCAGAGGGTTGGGAAGTGATGCAGAATTTATCATTGGGATATGAGGTTTGTGCAAATCGTATGGAGTGTGATGGA--------GGTTG-----TGGAGGCAAGCAGGCCAGATTTGGGCCCGAACTCTGCATT----CCGTGAAgtgggactttggtggagt---cataaaacatcaataagcttccactt-------cttttctgcaaatatagc-------------------------------------------------------------------------------agtattgcctgccatgcaaggctgttgcaaacactgag-aaaatatataaatctcctatacagtAAGATCTCTAACAATGTTAACTACTACTG--AATAAtattgctattgatttaatatt-----------taatactattgctat----------------------------------------tTTATTTGT---------------------------------AATATTGCCATTATTTATAATT----------------TTATTACTAATAATCA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11515334 771 - 12463322 catccctcttttggtaggagatggattaaatccctttcatacac------ttgaagcagaagttatccactagtatatattTGCATATGTGTTC-----TCCCTACCGGTTTTATCGAATGTATCCGAA-TCATGAATGCCGTGTG-AGTCACACATTGTGAATCATGAACT-TAG-TGATGGCCAAGTAATAGGTTCTCACACAGCCAACATGAGGTTGGTGGTAAAGACAAGGCCTCAGAAGTCTAAAGTTAACACACCTCTACTTTTATGACCAGCAGAGACTGCTCAAAACGTTCCTAA-Gaatcacaaccacaaccacaacca----caacaac------aagacaaacctacaaGTAGTCATCTAATTATTTTTCTGGAGTTTTAATACTACGACAACATTTAATGACTTTCTCTGTCTTAAGCAGAGGGTTGGGAAGTGATGCAGAATTTATCATTGGGATATGAGGTTTGTGCAAATCGTATGGAGTGTGATGGA--------GGTTG-----TGGAGGCAAGCAGGCCAGATTTGGGCCCGAACTCTGCATT----CCATGAAgtgggactttggtggagt---cataaaacatcaataagcttccactt-------cttttctgcaaatataac-------------------------------------------------------------------------------agtattgcctgccatgcaaggctgttgcaaacactgag-aaaatatataaatctcctatacagtaagagctctaacaatgttaactactactG--AATAATATTGCTATTGATTTAATATT-----------TAATACTATTGCTAT----------------------------------------TTTATTTGT---------------------------------AATATTGCCATTATTTATAATT----------------TTATTACTAATAATCA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156344775 760 + 157873769 tatccctcttttggtaggagatggattagatccctttcatacac------ttgaagcagaagttatccactagtatatattTGCATATATGTTC-----TCACTACCGATTTTATCAAATGTATCCGAG-TCATGAATGCCGTGTG-AGTCACACATTGTGACTCATGAACT-TAG-TGATGGCCAAGTAATAGGTTCTCACACAGCCAACATGAGATTGGTGGTAAAGACAAGGCCTCAGAAGTCTAAAATTAACACACCTCTACTTTTATGACCAGCAGAGACTGCTCAAAACGTTGCTAA------acaatcacaaccacaacca----caacgac------aagacaaacctacaaGTAGTCATCTAATTCTTTTTCTGGAGTTTTAATACTACGACAACATTTAATGACTTTCTCTCTCTTAAGCAGAGGGTTGGGAAGTGATGCAGAATTTATCATTGGGGTATGAGGTTTGTGCAAATCCTATGGAGTGTGATGGA--------GGTTG-----TGGAGGCAAGCAGGCCAGATTTGGGCCCAAACTCTGCAtt----acttgtagtgggactttggtggagt---cgtaaaacatccataagcttccactt-------cttttctgcaaatataac-------------------------------------------------------------------------------agtattgcctgccacaccaggctgttgcaaacgctgag-aaaatatataaatctcctatacagtAAGAACTCTAACAATGTTAACTATTACTG--AATAATATTGCTATTGATTTAATATT-----------TAA---TATTGCTAT----------------------------------------TTTATTTGT---------------------------------AATATTGCC---ATTCATAATT----------------TTATTACTAATAATTA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170370850 734 + 172585720 catccctcttttggtaggagatggactagatccctttcatacac------ttgaagcagaagtTATCCACCAGCATATGTTTGCATATCTGTAC-----TCGCTACCAGTTT-------------------------------------TCACACATTGTGAATCATGAACT-TAG-TAACGGCCACGTAATAGGTTCTCACACAGCCAACATGAGGTTGGTGGTAAAGACAAGGCCTCAGAAGTCTAAAGTTAACACAGCTCTACTTTTACGACCAGCAGAGACTGCTCAAAACGTTGCTA-------acaatcacaagcacaatca----caacaac------aaggcaaacctacaagTAGTCATCTAATTATTTTTCTGGAGGTTTAAAACTACGACAACATTTAATGACTTTCTCTGTCTTAAGCAGAGGGTTGGGAAGTGATGCAGAATTTATCATTGGGATATGAGGTTTGTGCCAATCCTGTGGCATATGGCGGA--------GGTTG-----tggaggcaagcaggccagatttaggcccaaactcttcatt----ccatgaagtcggattttggtggagt---cataaaacatcaataagcttccactt-------cttttctgcaaatataac-------------------------------------------------------------------------------agtatttcctgccacgtgaggctgttgcaaacactgag-aaaatatgtaaatctcctatacagtaagagctctaacaatgttaactgttatGG--AATAATATTGCTATTGATTTAATATT-----------TAATAATATTGTTATTTT------------------------------------ATTTATTTAT---------------------------------AATATTGCCATTATTTATATTT----------------TTCTTACTAATAATCA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169116150 734 - 170955103 catccctcttttggtAGGAGATGGACTAGATCCCTTTCATACAC------TTGAAGCAGAAGTTATCCACTAGCATATGTTTGCATATCTGTAC-----TCGCTACCAGTTT-------------------------------------TCACACATTGTGAATCATGAACT-TAG-TAACGGCCACGTAATAGATTCTCACACAGCCAACATGAGGTTGGTGGTAAAGACAAGGCCTCAGAAGTCTAAAGTTAACACAGCTCTACTTTTACGACCAGCAGAGACTGCTCAAAACGTTGCTA-------ACAATCACAAGCACAATCA----CAACAAC------AAGGCAAACCTACAAGTAGTCATCTAATTATTTTTCTGGAGGTTTAAAACTACGACAACATTTAATGACTTTCTCTGTCTTAAGCAGAGGGTTGGGAAGTGATGCAGAATTTATCATTGGGATATGAGGTTTGTGCCAATCCTGTGGCATATGGCGGA--------GGTTG-----TGGAGGCAAGCAGGCCAGATTTAGGCCCAAACTCTTCATT----CTGTGAAGTGGGATTTTGGTGGAGT---CATAAAACATCAATAAGCTTCCACTT-------CTTTTCTGCAAATATAAC-------------------------------------------------------------------------------AGTATTTCCTGCCACCCGAGGCTGGTGCAAACACTGAG-AAAATTTGTAAATCTCCTATACAGTAAGAGCTCTAACAATGTTAACTGTTATGG--AATAATATTGCTATTGATTTAATATT-----------TAATAATATTGTTATTTT------------------------------------ATTTATTTAT---------------------------------AATATTGCCATTATTTATCTTT----------------TTCTTACTAATAATCA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8402337 734 + 10161646 catccctcttttggtaggagatggactagatccctttcatacac------ttgaagcagaagtTATCCACTAGCATATGTTTGCATATCTGTAC-----TCGCTACCAGTTT-------------------------------------TCACACATTGTGAATCATGAACT-TAG-TAACGGCCACGTAATAGGTTCTCACACAGCCAACATGAGGTTGGTGGTAAAGACAAGGCCTCAGAAGTCTAAAGTTAACACAGCTCTACTTTTACGACCAGCAGAGACTGCTCAAAACGTTGCTA-------acaatcacaagcacaatca----caacaac------aaggcaaacctacaagTAGTCATCTAATTATTTTTCTGGAGGTTTAAAACTACGACAACATTTAATGACTTTCTCTGTCTTAAGCAGAGGGTTGGGAAGTGATGCAGAATTTATCATTGGGATATGAGGTTTGTGCCAATCCTGTGGCATATGGCGGA--------GGTTG-----tggaggcaagcaggccagatttaggcccaaactcttcatt----ctgtgaagtgggattttggtggagt---cataaaacatcaataagcttccactt-------cttttctgcaaatataac-------------------------------------------------------------------------------agtatttcctgccacccgaggctggtgcaaacactgag-aaaatttgtaaatctcctatacagtaagagctctaataatgttaactgttatGG--AATAATATTGCTATTGATTTAATATT-----------TAATAATATTGTTATTTT------------------------------------ATTTATTTAT---------------------------------AATATTGCCATTATTTATCTTT----------------TTCTTACTAATAATCA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1433896 734 + 3144229 catccctcttttggtaggagatggattagatccctttcatacac------ttgaagcagaagtTATCCACTAGCATATGTTTGCATATCTGTAC-----TCGCTACCAGTTT-------------------------------------TCACACATTGTGAATCATGAACT-TAG-TAACGGCCACGTAATAGGTTCTCACACAGCCAACATGAGGTTGGTGGTAAAGACAAGGCCTCAGAAGTCTAAAGTTAACACAGCTCTACTTTTACGACCAGCAGAGACTGCTCAAAACGTTGCTA-------acaatcacaagcacaatca----caacaac------aaggcaaacctacaagTAGTCATCTAATTCTTTTTCTGGAGTTTTAAAACTATGACAACATTTAATGACTTTCTCTGTCTTAAGCAGAGGGTTGGGAAGTGATGCAGAATTTATCATTGGGATATGAGGTTTGTGCTAATCCTGTGGCATATGGCAGA--------GGTTG-----TGGAGGCAAGCAGGCCAGATTTAGGCCCAAACTCTTCATT----CCATGAAgtgggattttgatggagt---cataaaacatcaataagcttccactt-------cttttctgcaaatataac-------------------------------------------------------------------------------agtatttcctgccatgcgaggctgttgcaaacactgag-aaaatatgtaaatctcctatacagtAAGAGCTCTAACAATGTTAATTGTTATGG--AATAATATTGCTATTGATTTAATATT-----------TAATAATATTGTTATTTT------------------------------------ATTTATTTAT---------------------------------AATATTGCCATTATTTATCTTT----------------TTCTTACTAATAATCA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96719916 720 + 98384682 catccctcttttggtaggagatggattagatccctttcatacac------ttgaagcagaagtTATCCACTAGCATATGTGTGCATATGTGTAC-----TCACTACCAGTTT-------------------------------------TCACACATTGTGAATCATGAACT-TAG-TAACGGCCAAGTAATAGGTTCTCACACAGCCAACATGAGGTTGGTGGTAAAGACAAGGCCTCAGAAGTCTAAAGTTAACACAGCT---------CGACCAGCAGAGACTGCTCAAAACGTTGCTA-------acaatcacaagcacaacca----caacaac------aaggcaaacctacaaGTAGTCATCTAATTCTTTTTCTGGAGTTTTAAAACTACGACAACATTTAATGACTTTCTCTGTCTTAAGCAGAGGGTTGGGAAGTGATGCAGAATTTATCATTGGGATATGAGGTTTGTGCCAATCCTATGGCATATGACGGA--------GGTTG-----TGGAGGCAAGCAGGCCAGATTTAGGCCCAAACTCTTCATT----CCATGAAGTGGGATTTTGGTGGAGT---CATAAAACATCAATAAGCTTCCACTT-------CTTTTCTGCAAATATAGC-------------------------------------------------------------------------------AGTATTTCCTGCCACGCGAGGCTGTTGCAAACACTGAG-AAAATATGTACATCTCCTATACAGTAAGAGCTCTAACAATATTAACTGTTATGG--AATAATATTGCTATTGATTTAATATT-----------TAATAATATTG-----TT------------------------------------ATTTATTTAT---------------------------------AATATTGCCATTATTTATATTT----------------TTCTTACTAACAATCA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8256240 734 - 10857215 catccctcttttggtaggagatggattagatccctttcatacac------ttgaagcagaagtTATCCACTAGCATATGTTTGCATATCTGTAC-----TCGCTACCAGTTT-------------------------------------TCACACATTGTGAATCATGAACT-TAG-TAACGGCCACGTAATAGGTTCTCACACAGCCAACATGAGGTTGGTGGTAAAGACAAGGCCTCAGAAGTCTAAAGTTAACACAACTCTACTTTTACGACCAGCAGAGACTGCTCAAAACGTTGCTa-------acaatcacaagcacaacta----caacaac------aaggcaaacctacaaGTAGTCATCTAATTCTTTTTCTGGAGTTTTAAAACTACGACAACATTTAATGACTTTCTCTGTCTTAAGCAGAGGGTTGGGAAGTGATGCAGAATTTATCGTTGGGATATGAGGTTTGTGCCAATCCTGTGGCATATGGCGGA--------GGTTG-----tggaggcaagcaggccagatttaggcccaaactcttcatt----ccatgaagtgggattttggtggagt---cataaaacatcaataagcttccactt-------cttttctgcaaatataac-------------------------------------------------------------------------------agtatttcctgccacgcgaggctgttgcaaacactgag-aaaatatgtaaatctcctatacagtaagagctctaacaatgttaactgttatGG--AATAATATTGCTATTGATTTAATATT-----------TAATAATATTGTTATTTT------------------------------------ATTTATTTAT---------------------------------AATATTGCCATTATTTATCTTT----------------TTCTTACTAATAAGCA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15645412 734 - 23502949 catccctcttttggtaggagatggattagatccctttcatacac------ttgaagcagaagtTATCCACTAGCATATGTTTGCATATGTGTAC-----TCAGTACCAGTTT-------------------------------------TCACACATTGTGAATCCTGAATG-TAG-TAACGGCCAAGTAATAGGTTCTCACACAGCCAACATGAGGCTGGTGGTAAAGACAAGGCCTCAGAAGTCCAAAGTTAACACAGCTCTACTTTTACGACCAGTAGAGATTGCTCAAAACGTTGCTA-------ACAATCACAAGCACAATCA----CAACAAC------AAGGCAAACCTACAAGTAGTCATCTGATTCTTTTTCTGGAGTTTTAAAACTACGACAACATTTAATGATTTTCTCTGTCTTAAGCAGAGGGTTGGGAAGTGATGCAGAATTTATCACTGGGATATGAGGTTTGTGCCAATCCTATGGCATATGACAGA--------GGTTG-----tggaggcaagcaggccagatttaggcccaaactcttcatt----ccatgaagtgggattttggtggagt---cataaaacatcaataagcttccactt-------cttttctgcaaatataac-------------------------------------------------------------------------------aatatttcctgccacacgaggctgttgcgaacactgag-aaaatatgtaaatctcctatactgtaagagctctaacaatgttaactgttaGGG--AATAATCTTGCTATTGATTTAATATT-----------TAATAATATTGTTATTTT------------------------------------ATTTATTTAT---------------------------------AATATTGCCATTATTTATGTTT----------------TTCTTACTAATAATCA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169930084 842 + 171630274 catcCCTCTTCTGTTAAGAGATGGATTAGATCCCTTTTACATAC------GTGGAGCCGAAGTTATCCATGAGTATGTATTTGCATGTGTACACGCAAATCACTGCTAACTTCATCAAACGTAT-CAAG-TCAGGAATGCCGTGTGAAGTCACTCGTTGCGAGCCATGAACT-TGG-TAATGGCCAAGTGCCAGGTTCTCACACAGCCAACATGGGGTCGGTGGGAAAGACAGGGCCTCGGAAGTCTAAACTTAACACAGGTCTACGTTTAGCACCAGCAGGGGCTGCTGGAAATGCTGCTAA------ACAACCACAACCACAACCA----TAACAAT------GA-ACAAACCCGTGCGCGGTCGTCTAATTC-----CTGCAATTTTAAAAGTGCGGCAACATCTAATGACTTTCTCTGTCTCAAGCAGAGGGTTGGGAAGGGATGTTGAGCGTGTCACTGGGATACGAGGTTTGTGCA--TCCTACGGCGCGTGACGGG--------GGTTG-----TGGAGGCACCAAGGCTGGGTTTCAGCCTGAACTCTGCATT----CCATGAAGTGACACTTTGGTGGAGC---CA-AAAGCATCAA-ACGCTTCTGCTG-------CTTTTCTACAAATGTAATAGTATCGCCCAAGTATTTTTACAAATAAAGTAACAGTTCGCCTGCCACGCGAGGCTACTTTTCTACAAATAAATGTAACAGTATCGCCTGCCACGCGAGGCTACTGCAAACACTGAG-AAAAGGTATCCATCTTCTGTCCCATAAGCGCTCCAACAATGTTAACGGCTATTG--AATAATATTGCCGTGGATTTAATAATATT--------TTATAACATTGCTAT----------------------------------------TTTACTCAT---------------------------------AATATTGCCATTATTTATAATT----------------TTCTTACTAAC-ATCA i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1331017 759 - 2905041 CATCCCTCTTCTGGTAAGAGATGGATTAGAT-CCTTTTACACAC------GTGGAGCAGAAGTTTTCCACTAGTATGTATTTGCGTAAGTGCAC-----TCACTACTAGTTTCATCAAATGTAT-CAAG-TCACGAATGCTGTGTG-AGTCACCCATGGTGGACCATGAACT-TAG-TCATGGCCAGGTAACACGTTCTCACACAGCCAACACGAGGTCGGTGGTAAAGACAAGGCCTCAGAAGTCTACACTTAACACAGGTCTACTTTTAGGACCAGCAGGGGCTGCTCAAAATGTTGCTAAACAATCACAACCACAACCACAACCG----TAACAAT------AA-ACAAACCCGTGCGTGGTCATCTAATTCCTTTTCTGGAATTTTAAAACTACAACAACATCTAATGACTTTCTCTGTCTTAAGCAGAGGGTTGGGAAGTGATGCTGAATGTATCACTGGGATACGGGGTTTGTGCA--------------TGATGGA--------ggttg-----tggaggcacccaggctggggttaggcctgaactctgcatc----ccatgaagtggggctttgggggagc---ca-aaagcatcaa-aagtttctgctg-------cttttctacaaatataat-------------------------------------------------------------------------------agtactgcctgccacgtgaggctgttgcaaacactgag-aaaatgtataaatcatctatacagtaagagctccaacaatgttaactgctactG--AATAATATTGCCATGGatttaataatatt-----taataataatattGCTAT----------------------------------------TTTACTTTT---------------------------------AATATTGCCATCGTTTATAATT----------------TTCTTACCAATAATCA i saiBol1.JH378287 M 812 C 0 s cebCap1.NW_016107695v1 1295740 768 - 2164891 CATCCCTCTCCTGATAAGATATGGGTTAGATCCCTTTTACACAC------GTGGAGCAGAAGTTATCCACTAATATGTATTTGCATATGTGCAC-----TCACTACTAGTTTCATCAAATGTAT-CAAG-TCACGAATGCTGTGTG-AGTCACGAGTTGCGAACCATGAACT-TAG-TAATGGCCAAGTAACAGGTTCCCACATGGCCAACATGAAGTTGGTGGTAAAGACAAGGCCTCAGAAGTCTAAACTTAACACAGGTCTACTTTTAGGACTAGCAGCGGCTGCTCAAAATGTTGCTGA------ACAGTCACAAGCACAACCA----TAACAAT------AA-ACAAACCTGTGCGCGGTCATCTAATTCTTTTTCTGGAATTTTAAAACTACAACAACATCTAATGACTTTCTCTGTCTTAAGCAGAGGGTTGGGAAGTGATGCTGAATGTATCACTGGGATATGAGGTTTGTGCAAATCCTACGGCGCATGATGGA--------GGTTG-----TGGAAGCGCCCAGGctgggtttgggcctgagctctgcgtt----ccatgaagtgggactttggtggagc---ca-aaagcatcaa-aagcttctgctg-------cttttctacaaatataat-------------------------------------------------------------------------------agtatttcctgccaggcaaggctgttgcaaacactgag-aaaatgtataaactttctatacggtaacagctccaacaatgttaactgctattG--AATGATACTGCCATGGATTTAATAATATT-----TAATAATAATATTGCTAT----------------------------------------TTTGCTTAT---------------------------------AATATTGCCATTATTTATAATT----------------TTCTTACTAATAATCA i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1540976 724 - 1813869 tgtccctcttctggtAGGAGCTGGATTAGAT-CCCCTTACACCT------GTGAAGCAGAA-TTATTCACTAGTTTATATTTGCACACGTGCAC-----TCACTATTAGTTTCATCCAAGGTAT-CAAG-TCACGAACGCTGTGTG-AGTCACGCGTTGCGAACCACGATCT-TAG-TAATGGCCAAGTAACAGGTTCTCACACGGCCAACATGAGGTCGGTGGTGAAG-------------------------ACACAGGTCTACCTTTAGGACCAGCAGGGGCTGCTCAAAATGTTGCTAA------acaatcacaaccacaacct----taacaat------aa-acaaaccCGTGTGTGGTCATCTAATTCTTTTTCTGGAATTTTAAAACTACAACAACATCTAGTGACCTTCTCTGTCTTAAGCGGAGGGTTGGGAAGTGATGCTGAATGTATCACTGGGATACGAGGCTTGTGCAAATCCTACGGTGTGTGGTGGA--------GGTTG-----TGGAGGCACC-AGGCTGGGTTTAGGCCTGAACTCTGCATT----CCATGAAGTGGGACTTTGGTGGAGC---CA-AAAGCATCAA-AAGCTTCTGCTG-------CTTTTCTACAAATATAAT-------------------------------------------------------------------------------AGTATTGCC----------------TGCAAACCCTGAG-AAAATGTATAAATCTTCTATACAGTAAGAGCTGCAACAATGTTAACTGCTATTG--AATAATATTGCCGTGGATTTAATAATATT-----TAATAATAATATTGCTAT----------------------------------------TGTACTTAT---------------------------------AATACTGCCATTATTTCTAATT----------------TTCTTACTAATAATCA i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10976548 767 - 12073884 --cccctctgttgacagcagataaattagatgccttttattctcccttggctgaagcaggatttatctatcagcacatattttCATTTACCTAA-----CTGTTACCAGCTCCACCCTACATGTCCAAG-TCACAAATGCTGAGTG-AGCTGTGCGTTCT-AATCATAAGCTAGGG-TTATCGCCAAGAGACAGGTTCCCATACAGCAAACACAAGATTGTCAGTACAGGCAACGCCTCTG-CGTCCCAACTCAACACAGTCATACTGTTACGACCAGTACAAACAGCTCGACACTTTGTTAA------AGAGCCACCACCACAGCAACTATCAGCAACATTGAAAAGACAGA-CTGTATGTAG-CATCTGATGCTGTTTCTGGAGTTTTAAAATTAAAACAACGTTTAAAGACTATCTTTGTCTTAAGCAGAAAATTGGG-AGCTATAAGGCAGTCATGGTTAGAACACAAGGCTTACGCATCCTCTACGGAGCATGAAGGACAGCCCAGGGCAGAAGGCCTgagccagagaggctgggtctgagtctgagctctgcatttccaccaaagggggtgactctggatgaatataaatgtaatattgatattgttacacttccatagccttttttgcaaa-ataag-------------------------------------------------------------------------------agcactgtctaccacacaaga-tgttgtaaacattgaa-aaaatatataagcctcccatgtgataag--ctccagtgatgttagctattat-A--AATAAT--TGC-ATTTATTTAATAAT-----------TG-----------------------------------------------------------------------------------------------------GCCTTTATTTAAAATT----------------TTCTTGCTAATAATCA i otoGar3.GL873575 C 0 C 0 s dasNov3.JH569188 621071 792 + 760995 tttctcttttttggcacatgataaatcaggtcccttttactccatcttgactggagcagaagtTATCCATGAATACATAATCTCATATATCTAT-----TTGTTACTAGTCT-------CATATCCAAATTTGAAAATGCTGCATG-AGCCATGTATTTCTAATCATGAACT-TTGCTTGTGGCCTAATAATAGATTCTTACAGAGCAAATGCAAAATTGTT---AAAGACAAGGTCTCTGAAGCCTTTATTTAACATAGATACATTTTAATGACCAGTAGAGGTCGCTAAAGGCTTTACTAA------GCA---------ACAACCA-----------------AAGACCAACCTTGAAGTAGCCTTCAAATTCTCATAGTTG---TTTAAAA--ACGA-AATATTTTAAATCTTTCCGCATCTGAAGCAGAGAATAGAAGAG-AATATAGAGCTTATCATTTGCACACAGAGTCAGTGCAG-------GACGGACAATGTA--------TGTTC-----TGGAGCTAGATTGGC------------------------T----GGATGAAATAGgactttgagctagt---taccaaataccactaagcttcaattt------ccttttctgtaaaaataat-------------------------------------------------------------------------------aatGTTG----------------------AAAATTGAGAAAAATATGTAAACCTCCTGTGTAATAAAAGCTCTACCAACCTCAGCTACTAGTATTAGTAGTAATTATATTCACTTAATAATATTACCATCTTTTACATTTTTCCTATGTTGGATCAGATATAGTAAATCAGAGAAAAGATTTTTCAATTAACTTTTGAATTTTAGTACCTAAAATTTAGTACCTAAAAAAATTTTGTCATTTTTGATGATTTTTCCCTATTATGTCATTATTATTAttattta i dasNov3.JH569188 C 0 I 343 e canFam3.chr1 56204890 2167 + 122678785 I a score=1336218.000000 s hg38.chr6_KB021644v2_alt 143148 137 + 185823 AACACAACTCAAAATCAGAGAAAATATTTTTCCCAGAAACGTTTTCACTTTGCATACCTATGACCAGCAGAGGCTGCTCAAATCATGAACTTACTAATGCATCCAAAGTCCCACGTCATGGAAATATTCTCAGGATT s panTro5.chr6 173599828 137 + 175400573 AACACAACTCAAAATCAGAGAAAATATCTTTCCCAGAAATGTTTTTACTTTGCATACCTATGACCAGCAGAGGCTGCTCAAATCATGAACTTACTAATGCATCCAAAGTCCCACGTCATGGAAATATTCTCAGGATT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171832870 137 + 173848474 AACACAACTCAAAATCAGAGAAAATATCTTTCCCAGAAACGTTTTCACTTTGCATACCTATGACCAGCAGAGGCTGCTCAAATCATGAACTTACTAATGCATCCAAAGTCCCACGTCATGGAAATATTCTCAGGATT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11516105 137 - 12463322 AACACAACTCAAAATCAGAGAAAATATTTTTCCCAGAAACGTTTTCACTTTGCATACCTATGACCAGCAGAGGCTGCTCAAATCACGAACTTTCTAATGCATCCAAAGTCCCACGTCATGGAAATATTCTCAGGATT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156345535 137 + 157873769 AACACAACTCAAAATCAGAGAAAATATTTTTCCCAGAAACGTTTTCACTTTGCGTACCTATGACCAGCAGAGGCTGCTCAAATCATGAACTTGGTAATACATCCAAAGTCCCACATCATGGAAATATTCTCAGGATT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170371584 137 + 172585720 AACACAACTCAGAATCAGAGAAAATATTTTTCCCAGAAACGTTTTCACTTTGCGTACCTATGACCAGCAGAGACTGCTCAAATCGTGAACTTACTAATGTGTCCAAAGTCCCACGTCATGGAAATATTCTCAGGATT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169116884 137 - 170955103 AACACAACTCAGAATCAGAGAAAATATTTTTCCCAGAAACGTTTTCACTTTGCGTACCTATGACCAGCAGAGACTGCTCAAATTGTGAACTTACTAATACGTCCAAAGTCCCACGTCATGGAAATATTCTCAGGATT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8403071 137 + 10161646 AACACAACTCAGAATCAGAGAAAATATTTTTCCCAGAAACGTTTTCACTTTGCGTACCTATGACCAGCAGAGACTGCTCAAATTGTGAACTTACTAATACGTCCAAAGTCCCACGTCATGGAAATATTCTCAGGATT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1434630 137 + 3144229 AACACAACTCAGAATCAGAGAAAATATTTTTCCCAGAAACGTTTTCACTTTGCGTACCTATGACCAGCAGAGACTGCTCAAATTGTGAACTTACTAATGCGTCCAAAGTCCCACGTCATGGAAATATTCTCAGCATT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96720636 137 + 98384682 AACACAACTCAGAATCAGAGAAAATATTTTTCCCAGAAACGTTTTCACTTTGCGTACCTATGACCAGCAGAGACTGCTCAAATCGTGAACTTACTAATGCGTCCAAAGTCCCATGTCATGGAAGTATTCTCAGGATT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8256974 137 - 10857215 AACACAACTCAGAATCAGAGAAAATATTTTTCCCAGAAGCGTTTTCACTTTGTGTACCTATGACCAGCAGAGACTGCTCAAATCGTGAACTTACTAATGCGTCCAAAGTCCCATGTCATGGAAATATTCTCAGGATT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15646146 137 - 23502949 AACACAACTCAGAATCAGAGAAAATGTTTTTCCCAGAAATGTTTTCACTTTGCATACCTATGATCAGCAGAGGCTGCCCAAATCGTGAACTTACTAATGCGTCCAAAGTCCCATGTCATGGAAATATTCTCAGGATT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169930926 133 + 171630274 AACACAACTCAAAGTCAGAGAAAATA-TTCTCCCAGAGACGTTTTCATTTTGTGTACCTATGACCAGCAGAGGCCACTCAAATCGTGAAGTTAGT---GAGTCCAAAGTCCCAGGTCATGGAAACATTCTCAGAATT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1331776 137 - 2905041 AACACAACTCAAAGTCAGAGAAAGTATTTCTCCCAGAGACGTCTTCATTTTGTGTACCTAGGAACAGCAGAGGCTACTCAAATCGTGACCTTCGTAAGAAGCCCAAAGTCCCAGGTCACGGAAATGGTCTCAGGATT i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1296508 137 - 2164891 AACACAACTCAAAGTCAGAGAAAATATTTCTCCAAGAGACGTTTTCATTTTGCATACCTATGACCAGCAGAGGCTACCCAAATCGTGAACTTAGCAATGAGTCCAAAGTCCCAGGTCACAGAAATATTCTCAGGATT i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1541700 132 - 1813869 AACACAAC-----GTCAGAGAAAGTATTTCTCCCAGAGACGTTTTCACTTTGCGTACCTATGACCAGCAGAGGCCACTCAGATCGCGAACTTAGTAATGAGTCCAGCGTCCCAGGTCCTGGGAATATTCTCAGGATT i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10977315 78 - 12073884 GACACAACTCAAAATCACAGAAAATATTCTTGGCAGAAACTTTTGCACTCTGTGAGCTTATAC-----------------------------------------------------------AATGTTTTGAGGATT i otoGar3.GL873575 C 0 C 0 e dasNov3.JH569188 621863 343 + 760995 I e canFam3.chr1 56204890 2167 + 122678785 I a score=125506.000000 s hg38.chr6_KB021644v2_alt 143285 15 + 185823 TGTCATTGTTCATGG s panTro5.chr6 173599965 15 + 175400573 TGTCATTGCTCATGG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171833007 15 + 173848474 TGTCATTGCTCATGG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11516242 15 - 12463322 TGTCATTGCTCATGG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156345672 15 + 157873769 TGTCATTACTCATGG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170371721 15 + 172585720 TGTCACCGCTCATTG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169117021 15 - 170955103 TGTCACCGCTCATTG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8403208 15 + 10161646 TGTCACCGCTCATTG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1434767 15 + 3144229 TGTCACCGCTCATTG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96720773 15 + 98384682 TGTCACCGCTCATTG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8257111 15 - 10857215 TGCCACCGCCCATTG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15646283 15 - 23502949 TGTCACTGCTCATTG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169931059 15 + 171630274 TGTCGTTTCTCATAG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1331913 15 - 2905041 TGTCATTGCTCGCAG i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1296645 15 - 2164891 TGTCATTGCTCGTAG i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1541832 15 - 1813869 TGTCATTGCTCACCG i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10977393 15 - 12073884 GGTCATTTTTAATAA i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56207057 14 + 122678785 TGTC-CTTTTCACGA i canFam3.chr1 I 2167 C 0 e dasNov3.JH569188 621863 343 + 760995 I a score=1130170.000000 s hg38.chr6_KB021644v2_alt 143300 114 + 185823 TTTTTCCCTCATAGGCCATAACTACTCCTCAT-TGTTGTCCAAGTGGGACTG-----------------------------AGAGT--------TCCTTTCCACTTTGTCTGCAGGGTCTTCAAAGGCGTCCTTAGAAAAAGATTAATTCCA s panTro5.chr6 173599980 114 + 175400573 TTTTTCCCTCATAGGCCATAACTACTCCTCAT-TGTTGTCCAAGTGGGACTG-----------------------------AGAGT--------TCCTTTCCACTTTGTCTGCAGGGTCTTCAAAGGCGTCCTTAGAAAAAGATTAATTCCA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171833022 114 + 173848474 TTTTTCCCTTATAGGCCATAACTACTCCTCAT-TGTTGTCCAAGTGGGACTG-----------------------------AGAGT--------TCCTTTCCACTTTGTCTGCAGGGTCTTCAAAGGCGTCCTTAGAAAAAGATTAATTCCA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11516257 114 - 12463322 TTTTTCCCTCATAGGCCATAACTACTCCTCAT-TGTTGTCCAAGTGGGACTG-----------------------------AGAGT--------TCCTTTCCACTTTGTCTGCAGGGTCTTCAAAGGCGTCCTTAGAAAAAGATTAATTCCA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156345687 114 + 157873769 TTTCTCCCTCGTAGGTCATAGCTACTCCTCAT-TGTTGTCCAAGTGGTACTG-----------------------------AGAGT--------TCCTTTCCGCTTTGTCTGCAGGGTCTTCAAAGGCGTCCTTAGAAAAAGATTAATTCCA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170371736 114 + 172585720 TTTCTCCCTCGTGGGCCATGACTACTCCTCAT-TGCTGTCCAAGTGGGACTC-----------------------------AGAGT--------TCCTTTCCACTTGGTCTGCAGGGTCTTCAAAGGCGTCCTTAGAAAAAGATTAATTCCA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169117036 114 - 170955103 TTTCTCCCTCGTGGGCCATGACTACTCCTCAT-TGCTGTCCAAGTGGGACTC-----------------------------AGAGT--------TCCTTTCCACTTGGTCTGCAGGGTCTTCAAAGGCGTCCTTAGAAAAAGATTAATTCCA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8403223 114 + 10161646 TTTCTCCCTCGTGGGCCATGACTACTCCTCAT-TGCTGTCCAAGTGGGACTC-----------------------------AGAGT--------TCCTTTCCACTTGGTCTGCAGGGTCTTCAAAGGCGTCCTTAGAAAAAGATTAATTCCA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1434782 114 + 3144229 TTTCTCCCTCGTAGGCCATGACTACTCCTCAT-TGCTGTCCAAGTGGGACTC-----------------------------AGAGT--------TCCTTTCCACTTGGTCTGCAGGGTCTTCAAAGGCGTCCTTAGAAAAAGATTAATTCCA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96720788 114 + 98384682 TTTCTCCCTCGTGGGCCATGACTACTACTCAT-TGCTGTCCAAGTGGGACTC-----------------------------AGAGT--------TCCTTTCCACTTGGTCTGCAGGGTCTTCAAAGGCATCCTTAGAAAAAGATTAATTCCA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8257126 114 - 10857215 TTTCTCCCTCGCGGGCCATGACTACTCCTCAT-TGCTGTCCAAGTGGGACTC-----------------------------AGAGT--------TCCTTTCCACTTGGTCTGCAGGGTCTTCAAAGGCGTCCTTAGAAAAAGATTAATTCCA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15646298 114 - 23502949 TTTTTCCCTTGTGGGCCATGACTACTCCTCAT-TGCTGTCCAAGTGGGACTC-----------------------------AGAGT--------TCCTTTCCACTTGGTCTGCAGGGTCTTCAAAGGCGTCCTTAGAAAAAGATTAATTCCA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169931074 115 + 171630274 TCTCTCCCTCGCAGGACATAATGACTCTTCAT-TGCTGTCTCAGTGGCTTTG-----------------------------AGAGT-------GTCCTTTCCGCTTTGTCAGCAGGGTCTTCAAAGGCATCCTTCGAAGAGGATTCATTGTG i calJac3.chr4 C 0 I 316 s saiBol1.JH378287 1331928 115 - 2905041 CGTCTCCCTCGTAGGCCGTCATGACCCCTCGT-GGTCGTCCAGGTGGGTTTG-----------------------------AGAGT-------GTCCTTTCCACTTCGTCCGCAGGGTCTTCAAAGGTGTCCTTCGAAAAGGATTCATTGTG i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1296660 115 - 2164891 TCTCTCCCTCGTAGGCCATCATGACTCCTCAT-TGTTGTCTAAGTGGGCTTG-----------------------------AGAGT-------GTCCTTTCTGCTTCGTCCGCAGGGTCTTCAAAGGCGTCCTTCGAAGAGGATTCACTGTG i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1541847 115 - 1813869 TCTCTCCCTCGTAGGCCATGATGACTCCGCAT-CGTTGTCTGAGTGGGTTTC-----------------------------AGAGT-------GTCCTTTCCGCTTTGCCTGCAGGGTCTTCAAAGGCGTCCTTCGAACAGGATTCATTGTG i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10977408 113 - 12073884 T-TCTCCCTCATAGGGCACAGTTACTTCTGACACTTTGACTAGATCTGGCTG-----------------------------AGATG--------TGCCTTCCACTTTGTCC-TACGTTCTACAGATACATCGTTAGAGAATGACGAATTGTG i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56207071 109 + 122678785 CATGTCCCTCATCAGCCATAATTACCTC-CAG-GGTTATCTGAATCAGACTG-----------------------------AGAGG--------TGCCCTCCCGTCAGCC--CTGGGGGTTCAGATGCACAATGGGGACA--ATTAACTATG i canFam3.chr1 C 0 I 2 s dasNov3.JH569188 622206 151 + 760995 cttcccCCTATTACGTCATAACCACTTCCCCT-TGCTGTCTAAATCAGATTGtaaaaaaaataaaatataaaaaataaattaGATTGTGATCAGCCCTTTTCATGTAGTCTTTAGCATCTACAGCTACATCATTGGAAAATGACTGATTATA i dasNov3.JH569188 I 343 C 0 a score=265212.000000 s hg38.chr6_KB021644v2_alt 143414 34 + 185823 GTGTTTCTTATGCATGATCA------------------TTTGATTTTATTCC s panTro5.chr6 173600094 34 + 175400573 GTGTTTCTTATGCATGATCA------------------TTTGATTTTATTCC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171833136 34 + 173848474 GTGTTTCTTACGCATGATCA------------------TTTGATTTTATTCC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11516371 34 - 12463322 GTATTTCTTATGCATAATCA------------------TTTGATTTTATTCC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156345801 34 + 157873769 GTATTTCCTATGCATGATCA------------------TTTGATTTTACTCC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170371850 34 + 172585720 GTATGTCTTAGGCATGATCA------------------TTTGCTTTTATTCC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169117150 34 - 170955103 GTATGTCTTAGGCATGATCA------------------TTTGATTTTATTCC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8403337 34 + 10161646 GTATGTCTTAGTCATGATCA------------------TTTGATTTTATTCC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1434896 34 + 3144229 GTATTTCTTAGACATGATCA------------------TTTGATTTTATTCC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96720902 34 + 98384682 GTATTTCTTAGACATGTTCA------------------TTTGATTTTATTCC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8257240 34 - 10857215 GTATGTCTTAGGCATGTTCA------------------TTTGATTTTATTCC i manLeu1.NW_012106474v1 C 0 M 4705 s colAng1.NW_012114488v1 15646412 34 - 23502949 GTATTTCTTAGGCATGATCA------------------TTTGATTTTATTCC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169931505 34 + 171630274 GTATTTCTTGGGCACGGTCC------------------TCTGGTTTTCTTCC i calJac3.chr4 I 316 C 0 s saiBol1.JH378287 1332043 34 - 2905041 GGGTTTGGTATGCATGATCG------------------TTTGGTTTTCTTCC i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1296775 20 - 2164891 --------------GTGTCG------------------TTTGGTTTTCTTCC i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1541962 34 - 1813869 GTATTTCTTATGCACGATCG------------------TTTGCTTTTCTTCC i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10977521 42 - 12073884 ACATTTCTTAGCCGCGATCAAAACC----------AATTTTCATTTTCATCT i otoGar3.GL873575 C 0 I 5 s canFam3.chr1 56207182 46 + 122678785 GTCACTTTCTGGCATGTGCACAGCT------TCCACATTTTGACCTTGCTTC i canFam3.chr1 I 2 C 0 s dasNov3.JH569188 622357 52 + 760995 GTAGTTCTTACCCATTATCAAAACAGTTTTATCACTAATTTTTTTTTATCCC i dasNov3.JH569188 C 0 C 0 a score=99373.000000 s hg38.chr6_KB021644v2_alt 143448 16 + 185823 CCTATGCCCAAGCGTT- s panTro5.chr6 173600128 16 + 175400573 CCTATGCCCAAGCGTT- i panTro5.chr6 C 0 C 0 s panPan2.chr6 171833170 16 + 173848474 CCTATGCCCAAGCGTT- i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11516405 16 - 12463322 CCTATGCCCAAGCGTT- i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156345835 16 + 157873769 CCTATGCCCAAGCGTT- i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170371884 16 + 172585720 ACTATGCCCAAGAGTT- i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169117184 16 - 170955103 ACTATGCCCAAGAGTT- i macFas5.chr4 C 0 I 322 s macNem1.NW_012011000v1 8403371 16 + 10161646 ACTATGCCCAAGAGTT- i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1434930 16 + 3144229 ACTATGCCCAAGAGTT- i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96720936 16 + 98384682 ACTATGCCCAAGGGTT- i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15646446 16 - 23502949 ACTATGCCCAAGGGTT- i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169931539 16 + 171630274 CCTCCGCCCGAGTGTT- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1332077 16 - 2905041 CCTCTGCCTGAGTGTT- i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1296795 16 - 2164891 CCTCTTCCCGAGTGTT- i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1541996 16 - 1813869 CCTCTGCCCGAGTGTC- i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10977568 16 - 12073884 CCCCTGGTGCAGTGTG- i otoGar3.GL873575 I 5 C 0 s canFam3.chr1 56207228 16 + 122678785 TCTGCAGCTTAATGTA- i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 622409 15 + 760995 --TATAACTCATCTATT i dasNov3.JH569188 C 0 C 0 e manLeu1.NW_012106474v1 8257274 4705 - 10857215 M a score=49310.000000 s hg38.chr6_KB021644v2_alt 143464 9 + 185823 AAGATGTTT s panTro5.chr6 173600144 9 + 175400573 AAGATGTTT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171833186 8 + 173848474 AAGATG-TT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11516421 9 - 12463322 AAGATGTTT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156345851 9 + 157873769 AAGATGTTT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170371900 9 + 172585720 AAGATGTTT i rheMac8.chr4 C 0 I 326 s macFas5.chr4 169117522 9 - 170955103 aaGATGTTT i macFas5.chr4 I 322 C 0 s macNem1.NW_012011000v1 8403387 9 + 10161646 AAGATGTTT i macNem1.NW_012011000v1 C 0 I 321 s cerAty1.NW_012002071v1 1434946 9 + 3144229 AAGATGTTT i cerAty1.NW_012002071v1 C 0 I 327 s chlSab2.chr13 96720952 9 + 98384682 AAGATGTTT i chlSab2.chr13 C 0 I 317 s colAng1.NW_012114488v1 15646462 9 - 23502949 AAGATGTTT i colAng1.NW_012114488v1 C 0 I 315 s calJac3.chr4 169931555 6 + 171630274 AAGATG--- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1332093 6 - 2905041 AAGATG--- i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1296811 6 - 2164891 AAGGTA--- i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1542012 6 - 1813869 AAGATG--- i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10977584 9 - 12073884 AGGGTATTT i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56207244 5 + 122678785 AAGAT---- i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 622424 9 + 760995 AAGAAGTTA i dasNov3.JH569188 C 0 C 0 e manLeu1.NW_012106474v1 8257274 4705 - 10857215 M a score=-12648.000000 s hg38.chr6_KB021644v2_alt 143473 6 + 185823 ----TTTA--TT s panTro5.chr6 173600153 8 + 175400573 ----TTTATTTT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171833194 6 + 173848474 ----TTTA--TT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11516430 6 - 12463322 ----TTTA--TT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156345860 5 + 157873769 ----TTTA---T i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169117531 6 - 170955103 ----CTAA--TT i macFas5.chr4 C 0 C 0 s otoGar3.GL873575 10977593 2 - 12073884 ----CC------ i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56207249 2 + 122678785 ----TT------ i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 622433 6 + 760995 AGAATT------ i dasNov3.JH569188 C 0 C 0 e saiBol1.JH378287 1332099 0 - 2905041 C e aotNan1.NW_018494782v1 1542018 0 - 1813869 C e cebCap1.NW_016107695v1 1296817 0 - 2164891 C e calJac3.chr4 169931561 0 + 171630274 C e colAng1.NW_012114488v1 15646471 315 - 23502949 I e chlSab2.chr13 96720961 317 + 98384682 I e cerAty1.NW_012002071v1 1434955 327 + 3144229 I e manLeu1.NW_012106474v1 8257274 4705 - 10857215 M e macNem1.NW_012011000v1 8403396 321 + 10161646 I e rheMac8.chr4 170371909 326 + 172585720 I a score=1518376.000000 s hg38.chr6_KB021644v2_alt 143479 168 + 185823 TTTTTTTCCTATTGGATCAAGTAGGCTA---TGTCCCAGTG--TATAAATCTCACTTATTACACA-T-AAATAAACTTAAAATATGATTGAAATCTCTATATGTGCTTTCCACTGCGTCAGACGGAAGTTTGGAGACAGAAGTGGTTG-AACACAGGTCAGACGAATCATACGCCC s panTro5.chr6 173600161 168 + 175400573 TTTTTTTCCTATTGGATCAAGTAGGCTA---TGTCCCAGTG--TATAAATCTCACTTATTACACA-T-AAATAAACTTAAAATATGATTGAAATCTCTATATGTGCTTTCCACTGCGTCAGACGGAAGTTTGGAGACAGAAGTGGTTG-AACACAGGTCAGATGAATCATACGCCC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171833200 157 + 173848474 TTTTTTTCCTATTGGATCAAGTAGGCTA---TGTCCCAGTG--TATAAATCTCACTTATTACACA-T-AAA------TAAAATATGATTGAAATCTCTATATGTGCTTTCCACTGCGTCAGACGGAAGTTTGGAGACAGAAGTGATTG-AACACAGGTCAGACGAATCATA----- i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11516436 168 - 12463322 TTTTTTTCCTATTGGATCAAGTAGGCTA---TGTCCCAGTG--TATAAATCTCACTTATTACACA-T-AAATAAACTTAAAATATGATTGAAATCTCTATATGTGCTTTCCACTGCGTCAGACGGAAGTTTGGAGACAGAAGTGGTTG-AACACAGGTCAGACGAACCATACGACC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156345865 163 + 157873769 TTTTTTTCCTATTGGATCAAGTAGACTA---TGTCCCAGTG--TATAAATCTCAGTTAATACACA-T-AAATAAACTTAAAATATGACTGAAATCTCTACATGTGGTTTCCACTGCGTCAGACGGAAGTTTGGAGACAGAAGTCGTTG-AATACAGGTCAGACGAATCATA----- i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170372235 168 + 172585720 TTTTTTTCCTATTGGATCAAGTAAGCTA---TGTCCCAGTG--TATAAATCTCACTTATTACACA-T-AAATAAACTTAAAATATGATTGAAATCTCTGCATGTGGTTTCCACTGCGTCAGACAGAAGTTTGGAGACAGAAGTGGTTG-AATACAGGTCAGACGAATCATACACCC i rheMac8.chr4 I 326 C 0 s macFas5.chr4 169117537 166 - 170955103 --TTTTTCCTATTGGATCAAGTAAGCTA---TGTCCCAGTG--CATAAATCTCACTTATTACACA-T-AAATAAACTTAAAATATGATTGAAATCTCTGCATGTGGTTTCCACTGCGTCAGACAGAAGTTTGGAGACAGAAGTGGTTG-AATACAGGTCAGACGAATCATACACCC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8403717 168 + 10161646 TTTTTTTCCTATTGGATCAAGTAAGCTA---TGTCCCAGTG--TATAAATCTCATTTATTACACA-T-AAATAAACTTAAAATATGATTGAAATCTCTGCATGTGGTTTCCACTGCGTCAGACAGAAGTTTGGAGACAGAAGTGGTTG-AATACAGGTCAGACGAATCATACACCC i macNem1.NW_012011000v1 I 321 C 0 s cerAty1.NW_012002071v1 1435282 168 + 3144229 TTTTTTTCCTATTGGATCAAGTAAGCTA---TGTCCCAGTG--TATAAATCTCACTTATTACACA-T-AAATAAACTTAAAATATGATTGAAATCTCTGCATGTGGTTTCCACTGCGTCAGACAGAAGTTTGGAGACAGAAGTGGTTG-AATACAGGTCAGACGAATCATACACCC i cerAty1.NW_012002071v1 I 327 C 0 s chlSab2.chr13 96721278 168 + 98384682 TTTTTTTCCTATTGGATCAAGTAAGCTA---TGTCCCAGTG--TATAAATCTCACTTATTACACA-T-AAATAAACTTAAAATATGATTGAAATCTCTGCATGTGGTTTCCACTGCGTCAGACAGAAGTTTGGAGACAGAAGTGGTTG-AATACAGGTCAGACGAATCATACACCC i chlSab2.chr13 I 317 C 0 s colAng1.NW_012114488v1 15646786 164 - 23502949 TTTTTTTCCTATTGGATCAGGTA----A---TATCCCAGTG--TATAAAGCTCACTTATTACACA-T-AAATAAACTTAAACTATGATTGAAATCTCTGCACGTGGTTTCCACTGCGTCAGACGGAAGTTTGGAGACAGAAGTGGTTG-AATACAGGTCAGACGAATCATACACCC i colAng1.NW_012114488v1 I 315 C 0 s calJac3.chr4 169931561 161 + 171630274 GCTTTTTCCTATTGGATCAAGTAGGCCA---TGTCCCAGTG--GATCAATCT--CTTATTACACA-T-AAATGAACTCAGAATGTGATCGAAATGTCTACATGTGGTTTCCACCGCGTGGGACACAAGTGTGGAGACAGAAGCGGTTG-AATCCAGGCCGGACGCCTCCTA----- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1332099 161 - 2905041 GCTTTTTCCTATTGGATCAAGCGGGCCA---TGTCCCAGCG--GATCAATCTCACTTTTTACACA-T-AAATGAACTTAGAATGTGACTGAAATGTCTACATGCAGTTTCCACGGCGTGAGACG-AAGTGTGGAGACCGAAGCCGTTG-AATCCAGGCCGGGCGACTCCT------ i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1296817 168 - 2164891 GCTTTTTCCTATTGGATCAAATAGGCCA---TGTCCCAGTG--GATCAATCTCACTTATTACACA-T-AAATGAACTTAGAATGTGATTGAAATGTCTACATGTGGTTTCCACTGCGTGAGATGGAAGTGTGGAGACAGAAGCCGTTG-AATCCAGGCCGGACAACTCCTACGCCC i cebCap1.NW_016107695v1 C 0 I 36 s aotNan1.NW_018494782v1 1542018 163 - 1813869 GCTTTTTCCT-----ATCAAGTAGGCCA---TGTCCCAGTG--GGTCAGTCTCACTTATTACACA-T-AAATGAACTTAGAATGTGATTGAAATGTCTGCATGTGGTTTCCACTGCATGGGACGGAAGTGTGGAGACAGAAGCGGTTG-AATCCAGGCTGGACGATTCCTACGCCC i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10977595 161 - 12073884 -------CCTGTGGGATCAAGCAGGCTA---TGTTACAGTATTTATTAATCCAACTTGTTACACA-T-AAATGCGTTTAAAATAAGATGAAAATGTCTAGACATGGTTTCCACCACTCCAGAGTTAAGTCTGGAGCCAGAAGTGGTTGAAATACGGGTCAGAAGA--CGGGCGCT- i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56207251 159 + 122678785 TCTTTTTCTTATGGGGACAAGTGGGCCAGTCTATGACATT---TACATAGCTCTGTCATTACAAA-TCAAATGCATGTACAATATGAGAAAAATGCCCAAGTGTGGTTTCCATTGCCTCAG--GGAAGTTCTGAGTCAGAGGCGGTGA-AACTTCCGTCAGCAGAA---------- i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 622439 169 + 760995 --TTTTTCTTGTGGGTTCAAGTAGGCTA---TGCTACAATATTTATAAAGTTCACTTATTACACAGT-AAATACGTTTAAAATGTGACTAAAATGTCTAGGCAAGGTTTCCATTGCCATGGAATGAAGTTTTGAATCAAAATAATTGA-AATTTCGGTCAGAACAATCAGACTTTT i dasNov3.JH569188 C 0 C 0 e manLeu1.NW_012106474v1 8257274 4705 - 10857215 M a score=10681.000000 s hg38.chr6_KB021644v2_alt 143647 2 + 185823 TT s panTro5.chr6 173600329 2 + 175400573 TT i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11516604 2 - 12463322 TT i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170372403 2 + 172585720 TT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169117703 2 - 170955103 TT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8403885 2 + 10161646 TT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1435450 2 + 3144229 TT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96721446 2 + 98384682 TT i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15646950 2 - 23502949 TT i colAng1.NW_012114488v1 C 0 C 0 s aotNan1.NW_018494782v1 1542181 2 - 1813869 TT i aotNan1.NW_018494782v1 C 0 I 34 s canFam3.chr1 56207410 1 + 122678785 -T i canFam3.chr1 C 0 I 1 s dasNov3.JH569188 622608 2 + 760995 TT i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10977756 0 - 12073884 C e saiBol1.JH378287 1332260 0 - 2905041 C e cebCap1.NW_016107695v1 1296985 36 - 2164891 I e calJac3.chr4 169931722 0 + 171630274 C e nomLeu3.chr3 156346028 0 + 157873769 C e manLeu1.NW_012106474v1 8257274 4705 - 10857215 M e panPan2.chr6 171833357 0 + 173848474 C a score=163383.000000 s hg38.chr6_KB021644v2_alt 143649 40 + 185823 CGCCCTTCGCCCTCCC--TACCTCAG-AG-------GT-CGGATGTGGTG-A s panTro5.chr6 173600331 40 + 175400573 CGCCCTTCGCCCTCCC--TACCTCAG-AG-------GT-CGGATGTGGTG-A i panTro5.chr6 C 0 C 0 s panPan2.chr6 171833357 40 + 173848474 CGCCCTTCGCCCTCCC--CACCTCAG-AG-------GT-CGGATGTGGTG-A i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11516606 40 - 12463322 CGCCCTTTGCCCTCCC--CACCTCAG-AG-------GT-CGGATGTGGTG-A i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156346028 40 + 157873769 CACCCTTCGCCCTCCC--CATCTCAG-AG-------GT-CGGATGTGGTG-A i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170372405 41 + 172585720 CGCCCTTCGCCCTCCC--CATCTTAG-AG-------GT-CGGATGTGGTGCT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169117705 41 - 170955103 CGCCCTTCGCCCTCCC--CATCTTAG-AG-------GT-CGGATGTGGTGCT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8403887 41 + 10161646 CGCCCTTCGCCCTCCC--CATCTTAG-AG-------GC-CGGATGTGGTGCT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1435452 41 + 3144229 CGCCCTTCGCCCTCCC--CATCTTAG-AG-------GT-CGGATGTGGTGCT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96721448 41 + 98384682 TGCCCTTCGCCCTCCC--CATCTTAG-AG-------GT-CGGATGTGGTGCA i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15646952 41 - 23502949 CGCCCTTCGCCCTCCC--CATCTTAG-AG-------GT-CGGATGTGGTGCA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169931722 27 + 171630274 CGCCCTTGGCCTTCCC--TGTCC----------------------GGGTGC- i calJac3.chr4 C 0 I 1 s saiBol1.JH378287 1332260 31 - 2905041 ---------CCTTCCC--TCTCTGGG-AG-------GT-TGGACGGGGCGC- i saiBol1.JH378287 C 0 I 1 s otoGar3.GL873575 10977756 39 - 12073884 --CCCCATGGTACCTC--CACCTCAGTAA-------GC-CGGAGGCGGTGG- i otoGar3.GL873575 C 0 I 1 s canFam3.chr1 56207412 43 + 122678785 TACTGTGCACCCTTCC--TACCCCTC-AGACCTCCAGA-CGGCTACA----- i canFam3.chr1 I 1 C 0 s dasNov3.JH569188 622610 37 + 760995 -------CACCTTTCCTACATTTCAG-AG-------TTCCAGATGCCGTACA i dasNov3.JH569188 C 0 C 0 e aotNan1.NW_018494782v1 1542183 34 - 1813869 I e cebCap1.NW_016107695v1 1296985 36 - 2164891 I e manLeu1.NW_012106474v1 8257274 4705 - 10857215 M a score=1278041.000000 s hg38.chr6_KB021644v2_alt 143689 131 + 185823 TCGGGGCTTTCCACATGTCTGAAATGTCTGACATGGATGTGGtttttttaagcaaact------tcttagaactctgttttattttacatttacagaaaaa-ctgagaaagcagtactggaa-tcccacaagcccc-aca s panTro5.chr6 173600371 131 + 175400573 TCGGGGCTTTCCACATGTCTGAAATGTCTGACATGGATGTGGtttttttaagcaaact------tcttagaactctgttttattttacatttacagaaaaa-ctgagaaagcagtactggaa-tcccacaagcccc-aca i panTro5.chr6 C 0 C 0 s panPan2.chr6 171833397 131 + 173848474 TCGGGGCTTTCCACATGTCTGAAATGTCTGACATGGATGTGGttttttaaagcaaact------tcttagaactctgttttattttacatttacagaaaaa-ctgagaaagcagtactggaa-tcccacaagcccc-aca i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11516646 131 - 12463322 TCGGGGCTTTCCACATGTCTGAAATGTCTGACATGGATGTGGtttttttaagcaaact------tcttagaactctgttttattttacatttacagaaaaa-ttgagaaagcagtactggaa-tcccacaagcccc-aca i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156346068 131 + 157873769 TCGGGGCTTTCCACATGTCTGAAATGTCTGACATGGATGTGGCttttttaagcaaact------tcttagaactctgttttattttacatttacagaaaaa-ttgagaaagcagtactggaa-tcccacgagcccc-aca i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170372446 131 + 172585720 TCGGGGCTTTCCACATGTCTGAAACGTCTGACATGGAAGTGGttttttaaaataaact------tcttataactctgctttattttacatttacagaaaaa-ttgagaaagcagtactggaa-tcccatgagcccc-aca i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169117746 131 - 170955103 TCGGGGCTTTCCACATGTCTGAAACGTCTGACATGGAAGTGGttttttaaaataaact------tcttataactctgctttattttacatttacagaaaaa-ttgagaaagcagtactggaa-tcccacgagcccc-aca i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8403928 131 + 10161646 TCGGGGCTTTCCACATGTCTGAAACGTCTGACATGGAAGTGGttttttaaaataaact------tcttataactctgctttattttacatttacagaaaaa-ttgagaaagcagtactggaa-tcccacgagcccc-aca i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1435493 131 + 3144229 TCGGGGCTTTCCACATGTCTGAAACGTCTGACATGGAAGTGGttttttaaaataaact------tcttataactctgctttattttacatttacagaaaaa-ttgagaaagcagtactggaa-tcccatgagcccc-aca i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96721489 131 + 98384682 TCGGGGCTTTCCACATGTCTGAAATGTCTGACATGGAAGTGGttttttaaaataaact------tcttataactctgttttattttacatttacagaaaaa-ttgagaaagcagtactggaa-tcccacgagcccc-aca i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15646993 131 - 23502949 GCGGGGCTTTCCACATGTCTGAAATGTCTGACATGGAAGCGGttttttaaaataaact------tcttataactctgttttattttacatttacagaaaaa-ttgagaaagcagtactggaa-tctcatgagcccc-atg i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169931750 130 + 171630274 TCGGGGCTTTCCGTGTGTCTGAAGTGCCTGACACAGAAGTGGtttttctaaacaaacc------tcttagaactttgttttattttagatttacagaaaaa-ttgagaaagcgatacaggaa-ccccag-cgcccc-aca i calJac3.chr4 I 1 C 0 s saiBol1.JH378287 1332292 129 - 2905041 TCGGGGCTTTCCACGTGTCTGAAATGCCTAACATGGAGGCGGtttttctaaacaaacc------tcttagaacgttgttttattttagatttacagaaaag-ttgaggaagcggtgcaggaa--cccac-cgcccc-aca i saiBol1.JH378287 I 1 C 0 s cebCap1.NW_016107695v1 1297021 130 - 2164891 TTGGGGCTTTCCACGTGTCTGAAATGCCTAACATGGAAGTGGTTTTTCTAAACAAACC------TCTTAGAACATTGTTTTCttttagatttacagaaaaa-ttgagaaagcggtacaggaa-ccccac-cgcccc-aca i cebCap1.NW_016107695v1 I 36 C 0 s aotNan1.NW_018494782v1 1542217 130 - 1813869 TCATGACTTTCCATGTGTTTGAAATGCCTAACATGGAAGTGGtttttctaaacaaacc------tcttagaactttgttttattttagatttacagaaaaa-ttgagaaagtggtacaggaa-ccccac-cgcccc-gcg i aotNan1.NW_018494782v1 I 34 C 0 s otoGar3.GL873575 10977796 138 - 12073884 TCTAGCCCTTCAGTGTGTCTGAAATGTCTGGCACAGATATGTtttttataaacaaactttttaattttagaatgttattttatttcagatttacaaaaaaagctgagaaagcagtagggaag-tttcgatagctcc-gca i otoGar3.GL873575 I 1 C 0 s canFam3.chr1 56207455 133 + 122678785 CTGGGACACTCAGCATGTCTGAAATGCCTGCATACTGTGTGGTTTTCATAGCTGTAAA------TTATAGAACtttgttttattttagatttacagaagaa-ctgagaaaacagtgcaggaagtcccataagcccctgca i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 622647 125 + 760995 TTGAGTCTTTCAATGTGTGTGAAAAGTATGGCATGAGAGT--tttttttaaataaact------ttt---aattttagaatgcttataggttgcagaaaaa-aagtgaaaatag-acagagt-tcccacattcccc-aca i dasNov3.JH569188 C 0 I 513 e manLeu1.NW_012106474v1 8257274 4705 - 10857215 M a score=67708.000000 s hg38.chr6_KB021644v2_alt 143820 8 + 185823 ccactttc s panTro5.chr6 173600502 8 + 175400573 ccactttc i panTro5.chr6 C 0 C 0 s panPan2.chr6 171833528 8 + 173848474 ccactttc i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11516777 8 - 12463322 ccactttc i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156346199 8 + 157873769 ccactttc i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170372577 8 + 172585720 ccgctttc i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169117877 8 - 170955103 ccgctttc i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8404059 8 + 10161646 ccgctttc i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1435624 8 + 3144229 ccactttc i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96721620 8 + 98384682 ccgctttc i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15647124 8 - 23502949 ccactttc i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169931880 7 + 171630274 -cgctttc i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1332421 7 - 2905041 -ggccttc i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1297151 7 - 2164891 -cgctttc i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1542347 7 - 1813869 -ggctttc i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10977934 8 - 12073884 ccagtgtc i otoGar3.GL873575 C 0 I 896 s canFam3.chr1 56207588 8 + 122678785 tcagtttc i canFam3.chr1 C 0 C 0 e dasNov3.JH569188 622772 513 + 760995 I e manLeu1.NW_012106474v1 8257274 4705 - 10857215 M a score=295269.000000 s hg38.chr6_KB021644v2_alt 143828 37 + 185823 tgatgccgtgaacgt-ttttcctggtgtggtgcatctg s panTro5.chr6 173600510 37 + 175400573 tgctgccgtgaacgt-ttttcctggtgtggtgcatctg i panTro5.chr6 C 0 C 0 s panPan2.chr6 171833536 36 + 173848474 tgctgccgtgaacg--ttttcctggtgtggtgcatctg i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11516785 37 - 12463322 tgctgccgtgaacgt-ttttcctggtgtggtgcatctg i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156346207 37 + 157873769 tgctgctgtgaacgt-ttttcctggtgtggtgcatctg i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170372585 37 + 172585720 tgctgctgtgattgt-tttccctggtgtggtgcgtctg i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169117885 37 - 170955103 tgctgctgtgattgt-tttccctggtgtggtgcgtctg i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8404067 37 + 10161646 tgctgctgtgattgt-tttccctggtgtggtgcgtctg i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1435632 37 + 3144229 tgctgctgtgatcgt-tttccctggtgtggtgcgtctg i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96721628 37 + 98384682 tgctgctgtgatcgt-tttccctggtgtggtgcgtctg i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15647132 37 - 23502949 tgctactgtggtcgt-tttccctggtgtggtgcatctg i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169931887 35 + 171630274 tgctgctgtgcgt---ttttcctggtgtggtgcgtctg i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1332428 36 - 2905041 tgctgctctgagcg--ttttcctggcgcggcgcgtctg i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1297158 37 - 2164891 tgctgctgtgagcgt-ttttcctggtgtggtgcgtctg i cebCap1.NW_016107695v1 C 0 I 21 s aotNan1.NW_018494782v1 1542354 36 - 1813869 tgctgccgtgagtgt-ttttcctggtgt-gtgcatctg i aotNan1.NW_018494782v1 C 0 C 0 s canFam3.chr1 56207596 35 + 122678785 ---tcctgttcacatctttccttagaatggtacctctg i canFam3.chr1 C 0 C 0 e otoGar3.GL873575 10977942 896 - 12073884 I e dasNov3.JH569188 622772 513 + 760995 I e manLeu1.NW_012106474v1 8257274 4705 - 10857215 M a score=96817.000000 s hg38.chr6_KB021644v2_alt 143865 14 + 185823 cctcagtcatagaa s panTro5.chr6 173600547 14 + 175400573 cctcagtcatagaa i panTro5.chr6 C 0 C 0 s panPan2.chr6 171833572 14 + 173848474 cctcagtcatagaa i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11516822 14 - 12463322 cctcagtcatagaa i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156346244 14 + 157873769 cctcagtcatagaa i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170372622 14 + 172585720 cctcagtcatagaa i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169117922 14 - 170955103 cctcagtcatagaa i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8404104 14 + 10161646 cctcagtcatagaa i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1435669 14 + 3144229 cctctgtcatagaa i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96721665 14 + 98384682 cctcagtcatagaa i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15647169 14 - 23502949 cctcagtcatagaa i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169931922 14 + 171630274 tctcaatagtggaa i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1332464 14 - 2905041 tctcggtggtggaa i saiBol1.JH378287 C 0 C 0 s aotNan1.NW_018494782v1 1542390 14 - 1813869 tctcagtggtggaa i aotNan1.NW_018494782v1 C 0 C 0 s canFam3.chr1 56207631 14 + 122678785 ttacaattaatgaa i canFam3.chr1 C 0 C 0 e otoGar3.GL873575 10977942 896 - 12073884 I e cebCap1.NW_016107695v1 1297195 21 - 2164891 I e dasNov3.JH569188 622772 513 + 760995 I e manLeu1.NW_012106474v1 8257274 4705 - 10857215 M a score=35235.000000 s hg38.chr6_KB021644v2_alt 143879 5 + 185823 gcagt s panTro5.chr6 173600561 5 + 175400573 gcagt i panTro5.chr6 C 0 C 0 s panPan2.chr6 171833586 5 + 173848474 gcagt i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11516836 5 - 12463322 gcagt i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156346258 5 + 157873769 gcagt i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170372636 5 + 172585720 gcagt i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169117936 5 - 170955103 gcagt i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8404118 5 + 10161646 gcagt i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1435683 5 + 3144229 gcagt i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96721679 5 + 98384682 gcagt i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15647183 5 - 23502949 gcagt i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169931936 5 + 171630274 gcagc i calJac3.chr4 C 0 C 0 s aotNan1.NW_018494782v1 1542404 5 - 1813869 gcagc i aotNan1.NW_018494782v1 C 0 C 0 s canFam3.chr1 56207645 5 + 122678785 ccaac i canFam3.chr1 C 0 C 0 e otoGar3.GL873575 10977942 896 - 12073884 I e saiBol1.JH378287 1332478 0 - 2905041 C e cebCap1.NW_016107695v1 1297195 21 - 2164891 I e dasNov3.JH569188 622772 513 + 760995 I e manLeu1.NW_012106474v1 8257274 4705 - 10857215 M a score=17641.000000 s hg38.chr6_KB021644v2_alt 143884 3 + 185823 gtt s panTro5.chr6 173600566 3 + 175400573 gtt i panTro5.chr6 C 0 C 0 s panPan2.chr6 171833591 3 + 173848474 gtt i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11516841 3 - 12463322 gtt i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156346263 3 + 157873769 gtt i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170372641 3 + 172585720 gtt i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169117941 3 - 170955103 gtt i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8404123 3 + 10161646 gtt i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1435688 3 + 3144229 gtt i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96721684 3 + 98384682 gtt i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169931941 3 + 171630274 gtc i calJac3.chr4 C 0 C 0 s aotNan1.NW_018494782v1 1542409 3 - 1813869 att i aotNan1.NW_018494782v1 C 0 C 0 s canFam3.chr1 56207650 3 + 122678785 att i canFam3.chr1 C 0 C 0 e otoGar3.GL873575 10977942 896 - 12073884 I e saiBol1.JH378287 1332478 0 - 2905041 C e cebCap1.NW_016107695v1 1297195 21 - 2164891 I e dasNov3.JH569188 622772 513 + 760995 I e colAng1.NW_012114488v1 15647188 0 - 23502949 C e manLeu1.NW_012106474v1 8257274 4705 - 10857215 M a score=10990.000000 s hg38.chr6_KB021644v2_alt 143887 3 + 185823 ggt s panTro5.chr6 173600569 3 + 175400573 ggt i panTro5.chr6 C 0 C 0 s panPan2.chr6 171833594 3 + 173848474 ggt i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11516844 3 - 12463322 ggt i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156346266 3 + 157873769 ggt i nomLeu3.chr3 C 0 C 0 s cerAty1.NW_012002071v1 1435691 3 + 3144229 ggt i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96721687 3 + 98384682 ggt i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169931944 3 + 171630274 ggt i calJac3.chr4 C 0 C 0 s aotNan1.NW_018494782v1 1542412 3 - 1813869 gat i aotNan1.NW_018494782v1 C 0 C 0 s canFam3.chr1 56207653 3 + 122678785 gat i canFam3.chr1 C 0 I 40 e otoGar3.GL873575 10977942 896 - 12073884 I e saiBol1.JH378287 1332478 0 - 2905041 C e cebCap1.NW_016107695v1 1297195 21 - 2164891 I e dasNov3.JH569188 622772 513 + 760995 I e colAng1.NW_012114488v1 15647188 0 - 23502949 C e manLeu1.NW_012106474v1 8257274 4705 - 10857215 M e macNem1.NW_012011000v1 8404126 0 + 10161646 C e rheMac8.chr4 170372644 0 + 172585720 C e macFas5.chr4 169117944 0 - 170955103 C a score=2548.000000 s hg38.chr6_KB021644v2_alt 143890 1 + 185823 a s panTro5.chr6 173600572 1 + 175400573 a i panTro5.chr6 C 0 C 0 s panPan2.chr6 171833597 1 + 173848474 a i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11516847 1 - 12463322 a i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156346269 1 + 157873769 a i nomLeu3.chr3 C 0 C 0 s cerAty1.NW_012002071v1 1435694 1 + 3144229 a i cerAty1.NW_012002071v1 C 0 I 6 s calJac3.chr4 169931947 1 + 171630274 a i calJac3.chr4 C 0 C 0 s aotNan1.NW_018494782v1 1542415 1 - 1813869 a i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10977942 896 - 12073884 I e saiBol1.JH378287 1332478 0 - 2905041 C e cebCap1.NW_016107695v1 1297195 21 - 2164891 I e dasNov3.JH569188 622772 513 + 760995 I e colAng1.NW_012114488v1 15647188 0 - 23502949 C e canFam3.chr1 56207656 40 + 122678785 I e chlSab2.chr13 96721690 0 + 98384682 C e manLeu1.NW_012106474v1 8257274 4705 - 10857215 M e macNem1.NW_012011000v1 8404126 0 + 10161646 C e rheMac8.chr4 170372644 0 + 172585720 C e macFas5.chr4 169117944 0 - 170955103 C a score=2548.000000 s hg38.chr6_KB021644v2_alt 143891 1 + 185823 A s panTro5.chr6 173600573 1 + 175400573 A i panTro5.chr6 C 0 C 0 s panPan2.chr6 171833598 1 + 173848474 A i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11516848 1 - 12463322 A i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156346270 1 + 157873769 A i nomLeu3.chr3 C 0 C 0 s chlSab2.chr13 96721690 1 + 98384682 a i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169931948 1 + 171630274 a i calJac3.chr4 C 0 C 0 s aotNan1.NW_018494782v1 1542416 1 - 1813869 a i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10977942 896 - 12073884 I e saiBol1.JH378287 1332478 0 - 2905041 C e cebCap1.NW_016107695v1 1297195 21 - 2164891 I e dasNov3.JH569188 622772 513 + 760995 I e colAng1.NW_012114488v1 15647188 0 - 23502949 C e canFam3.chr1 56207656 40 + 122678785 I e cerAty1.NW_012002071v1 1435695 6 + 3144229 I e manLeu1.NW_012106474v1 8257274 4705 - 10857215 M e macNem1.NW_012011000v1 8404126 0 + 10161646 C e rheMac8.chr4 170372644 0 + 172585720 C e macFas5.chr4 169117944 0 - 170955103 C a score=6703.000000 s hg38.chr6_KB021644v2_alt 143892 4 + 185823 TCAG s panTro5.chr6 173600574 4 + 175400573 TCAG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171833599 4 + 173848474 TCAG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11516849 4 - 12463322 TCAG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156346271 4 + 157873769 TCAG i nomLeu3.chr3 C 0 C 0 s calJac3.chr4 169931949 4 + 171630274 ttag i calJac3.chr4 C 0 C 0 s aotNan1.NW_018494782v1 1542417 4 - 1813869 ttag i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10977942 896 - 12073884 I e saiBol1.JH378287 1332478 0 - 2905041 C e cebCap1.NW_016107695v1 1297195 21 - 2164891 I e dasNov3.JH569188 622772 513 + 760995 I e colAng1.NW_012114488v1 15647188 0 - 23502949 C e canFam3.chr1 56207656 40 + 122678785 I e chlSab2.chr13 96721691 0 + 98384682 C e cerAty1.NW_012002071v1 1435695 6 + 3144229 I e manLeu1.NW_012106474v1 8257274 4705 - 10857215 M e macNem1.NW_012011000v1 8404126 0 + 10161646 C e rheMac8.chr4 170372644 0 + 172585720 C e macFas5.chr4 169117944 0 - 170955103 C a score=5730.000000 s hg38.chr6_KB021644v2_alt 143896 4 + 185823 CATC s panTro5.chr6 173600578 4 + 175400573 CATC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171833603 4 + 173848474 CATC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11516853 4 - 12463322 CATC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156346275 4 + 157873769 CATC i nomLeu3.chr3 C 0 C 0 s aotNan1.NW_018494782v1 1542421 4 - 1813869 catc i aotNan1.NW_018494782v1 C 0 I 58 e otoGar3.GL873575 10977942 896 - 12073884 I e saiBol1.JH378287 1332478 0 - 2905041 C e cebCap1.NW_016107695v1 1297195 21 - 2164891 I e calJac3.chr4 169931953 0 + 171630274 C e dasNov3.JH569188 622772 513 + 760995 I e colAng1.NW_012114488v1 15647188 0 - 23502949 C e canFam3.chr1 56207656 40 + 122678785 I e chlSab2.chr13 96721691 0 + 98384682 C e cerAty1.NW_012002071v1 1435695 6 + 3144229 I e manLeu1.NW_012106474v1 8257274 4705 - 10857215 M e macNem1.NW_012011000v1 8404126 0 + 10161646 C e rheMac8.chr4 170372644 0 + 172585720 C e macFas5.chr4 169117944 0 - 170955103 C a score=134728.000000 s hg38.chr6_KB021644v2_alt 143900 241 + 185823 GTGGAGGCGGCGTCGGTGGTCAGCGTCGTGGAGGCCAGGTCAGTGGTCAGCGTCGTGGAGGTGGCGTCGGTGGTCAGCGTCGTGGAGGCCAGGTCAGTGGTCAGCGTCGTGGA-GGTGGCGTCGGTGGTCAGCGTCGTGGAGG-CCAGGTCAGTGGTCA-GCGTCGTGGAGGTGGCGTCGG-TGGTCAGCGTCGTGGAGGCCAG--GTCAGTGGTCAGCGTCGTGGA-GGTGGCGTCG----GTGGTCAGCG s panTro5.chr6 173600582 225 + 175400573 GTGGAGGCGGCGTCGGTGGTCAGCGTCGTGGAGGCCAGGTCAGTGGTCAGCGTCGTGGAGGTGGCGTCGG-------------------CGGGTCAGC-----GCATTGTGGATGGCGGC-TCGGTGGTCAGCGTCGTGGAGGAGCAGGTCAGTGGTCAGGCGTCGTGGAGGTGGC-TCGGTTGGTCCAGCTCGTGGA-GCCAGCCGTCAGTGGTCAGCGTCTCGGAGGGTGGCGTCGATCTGTGGTCAGCG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171833607 187 + 173848474 GTGGAGGCGGCGTCGGTGGTCAGCGTCGTGGAGGCCAGGTCAGTGGTCAGCATCGTggaggcggcgtcgg--------------------tggtca-------gcgtcatgga-ggcggcgtcggtggtcagcgtcatggagg-cggcgtcggtggtca-gcatcgtggaggcggcgtcgg-TGATCAGCGTCGTGGAGGCCAG--GTCA--------------------------------GTGGTCAGCG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11516857 214 - 12463322 GTGGAGGCGGCGTCGGTGGTCAGCATCGTGGAGGCCAGGTCAGTGGTCAGCATCGTGGAGGTGGCGTCGG--------------------TGGTCA-------GCATCGTGGA-GGCGGCGTCGGTGGTCAGCATCATGGAGG-CGGCGTCGGTGGTCA-GCGTCGTGGAGGCGGCGTCGG-TGGTCAGCGTCGTGGAGGCCAG--GTCAGTGGTCAGTGTCGTGGA-GGTGGCGTCG----GTGGTCAGCG i gorGor5.CYUI01015032v1 C 0 I 158 s nomLeu3.chr3 156346279 241 + 157873769 GTGGAGGCGGCGTCGGTGGTCAGCGTCGTGGAGGCGGCGTCGGTGGTCAGCGTCGTGGAGGCGGCATTGGTGGTCAGCGCCATGGAGGCCAGGTCAGTGGTCAGCGTCGTgga-ggcggcgtcggtggtcagcgtcgtggagg-cggcgtcggtggtca-gcgtcgtggaggcggcATCGG-TAATCAGCGTCGTGGAGGCGGT--GTCGGTAGTCAGCATCGTGGA-GGCGGCATTG----GTAATCAATG i nomLeu3.chr3 C 0 C 0 e otoGar3.GL873575 10977942 896 - 12073884 I e saiBol1.JH378287 1332478 0 - 2905041 C e aotNan1.NW_018494782v1 1542425 58 - 1813869 I e cebCap1.NW_016107695v1 1297195 21 - 2164891 I e calJac3.chr4 169931953 0 + 171630274 C e dasNov3.JH569188 622772 513 + 760995 I e colAng1.NW_012114488v1 15647188 0 - 23502949 C e canFam3.chr1 56207656 40 + 122678785 I e chlSab2.chr13 96721691 0 + 98384682 C e cerAty1.NW_012002071v1 1435695 6 + 3144229 I e manLeu1.NW_012106474v1 8257274 4705 - 10857215 M e macNem1.NW_012011000v1 8404126 0 + 10161646 C e rheMac8.chr4 170372644 0 + 172585720 C e macFas5.chr4 169117944 0 - 170955103 C a score=30852.000000 s hg38.chr6_KB021644v2_alt 144141 54 + 185823 TCGTGGAGGCCAGGTCAGTGGTCAGCGTCGTGGA--GGTG---------------------------GCGTCGGTGGTCAGCA s panTro5.chr6 173600807 55 + 175400573 TCGTGGAGG-CAGGTCAGTGGTCAGCGTCGTGGGACGTTG---------------------------GCGTCGGTGGTCACCG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171833794 54 + 173848474 TCGTGGAGGCCAGGTCAGTGGTCAGCGTCGTGGA--GGTG---------------------------GCGTCGGTGGTCAGCG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11517229 54 - 12463322 TTGTGGAGGCAGTGTCGGTAATCAGTGTCGTGGA--GGCG---------------------------GCGTTGGTGGTCACTG i gorGor5.CYUI01015032v1 I 158 T 212 s nomLeu3.chr3 156346520 81 + 157873769 TCGTGGAGGTCGCGTTGGTGGTCAGCATCGTGGA--GGCGGCATTGGTAATCAATGTCGTGGAGGTCGCGTTGGTGGTCAGTG i nomLeu3.chr3 C 0 C 0 e otoGar3.GL873575 10977942 896 - 12073884 I e saiBol1.JH378287 1332478 0 - 2905041 C e aotNan1.NW_018494782v1 1542425 58 - 1813869 I e cebCap1.NW_016107695v1 1297195 21 - 2164891 I e calJac3.chr4 169931953 0 + 171630274 C e dasNov3.JH569188 622772 513 + 760995 I e colAng1.NW_012114488v1 15647188 0 - 23502949 C e canFam3.chr1 56207656 40 + 122678785 I e chlSab2.chr13 96721691 0 + 98384682 C e cerAty1.NW_012002071v1 1435695 6 + 3144229 I e manLeu1.NW_012106474v1 8257274 4705 - 10857215 M e macNem1.NW_012011000v1 8404126 0 + 10161646 C e rheMac8.chr4 170372644 0 + 172585720 C e macFas5.chr4 169117944 0 - 170955103 C a score=3820.000000 s hg38.chr6_KB021644v2_alt 144195 4 + 185823 TCGT s panTro5.chr6 173600862 4 + 175400573 TCGT i panTro5.chr6 C 0 I 28 s panPan2.chr6 171833848 4 + 173848474 TCGT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11517071 4 - 12463322 TCGT i gorGor5.CYUI01015032v1 T 212 C 0 s nomLeu3.chr3 156346601 4 + 157873769 TCGT i nomLeu3.chr3 C 0 C 0 e otoGar3.GL873575 10977942 896 - 12073884 I e saiBol1.JH378287 1332478 0 - 2905041 C e aotNan1.NW_018494782v1 1542425 58 - 1813869 I e cebCap1.NW_016107695v1 1297195 21 - 2164891 I e calJac3.chr4 169931953 0 + 171630274 C e dasNov3.JH569188 622772 513 + 760995 I e colAng1.NW_012114488v1 15647188 0 - 23502949 C e canFam3.chr1 56207656 40 + 122678785 I e chlSab2.chr13 96721691 0 + 98384682 C e cerAty1.NW_012002071v1 1435695 6 + 3144229 I e manLeu1.NW_012106474v1 8257274 4705 - 10857215 M e macNem1.NW_012011000v1 8404126 0 + 10161646 C e rheMac8.chr4 170372644 0 + 172585720 C e macFas5.chr4 169117944 0 - 170955103 C a score=7317.000000 s hg38.chr6_KB021644v2_alt 144199 21 + 185823 -----------------------GGAGGCCAGGTCAGTGGTCAG s panPan2.chr6 171833852 21 + 173848474 -----------------------GGAGGCCAGGTCAGTGGTCAG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11517075 21 - 12463322 -----------------------GGAGGCCAGGTCAGTGGTCAG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156346605 44 + 157873769 GGAGGCCACGTTGGTAGTGTCATGGAGGCAGCGTCGGTAATCAG i nomLeu3.chr3 C 0 C 0 e otoGar3.GL873575 10977942 896 - 12073884 I e saiBol1.JH378287 1332478 0 - 2905041 C e aotNan1.NW_018494782v1 1542425 58 - 1813869 I e cebCap1.NW_016107695v1 1297195 21 - 2164891 I e calJac3.chr4 169931953 0 + 171630274 C e dasNov3.JH569188 622772 513 + 760995 I e colAng1.NW_012114488v1 15647188 0 - 23502949 C e canFam3.chr1 56207656 40 + 122678785 I e chlSab2.chr13 96721691 0 + 98384682 C e cerAty1.NW_012002071v1 1435695 6 + 3144229 I e manLeu1.NW_012106474v1 8257274 4705 - 10857215 M e macNem1.NW_012011000v1 8404126 0 + 10161646 C e rheMac8.chr4 170372644 0 + 172585720 C e macFas5.chr4 169117944 0 - 170955103 C e panTro5.chr6 173600866 28 + 175400573 I a score=59438.000000 s hg38.chr6_KB021644v2_alt 144220 98 + 185823 CGTCGTGGAGG---TGGCA-TCGGTAGTCAG-TGTGGTGGAGGCAGCGTT----GGTAAT--CAGC-GTTGT--GGAGGCCACGTTG-GTAGAGTC-ATGGAGGCAGTGTCGGT s panTro5.chr6 173600894 114 + 175400573 CGTCGTAGAGAGGTTGGCATTCGGTAGTCAGAGGTGGTGGAGGCAGCGTTGTAGGCTAATCGCAGCAGTTGTGCGCAGGCCACGGGGTGTAGAGTCAATGGAGGCAGTGTCGGT i panTro5.chr6 I 28 I 15 s panPan2.chr6 171833873 98 + 173848474 CGTCGTGGAGG---TGGCG-TCGGTGGTCAG-TGTGGTGGAGGCAGCGTT----GGTAAT--CAGC-GTTGT--GGAGGCCACGTTG-GTAGAGTC-ATGGAGGCAGTGTCGGT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11517096 98 - 12463322 CGTCGTGGAGG---TGGCA-TCGGTAGTCAG-CGTGTTGGAGGCAGCGTT----GGTAAT--CAGC-GTCGT--GGAGGCCATGTTG-GTAGAGTC-ATGGAGGTAGTGTCGGT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156346649 98 + 157873769 CGTCGTGGGGG---TGGCA-CTGGTAATCAG-CGTTGCGGAGGCGGCATT----GGTAGT--CAGC-GTCAT--GGAGGCCGTGTTG-GTAGCGTC-ACGGAGGTGGCGTCAGT i nomLeu3.chr3 C 0 C 0 e otoGar3.GL873575 10977942 896 - 12073884 I e saiBol1.JH378287 1332478 0 - 2905041 C e aotNan1.NW_018494782v1 1542425 58 - 1813869 I e cebCap1.NW_016107695v1 1297195 21 - 2164891 I e calJac3.chr4 169931953 0 + 171630274 C e dasNov3.JH569188 622772 513 + 760995 I e colAng1.NW_012114488v1 15647188 0 - 23502949 C e canFam3.chr1 56207656 40 + 122678785 I e chlSab2.chr13 96721691 0 + 98384682 C e cerAty1.NW_012002071v1 1435695 6 + 3144229 I e manLeu1.NW_012106474v1 8257274 4705 - 10857215 M e macNem1.NW_012011000v1 8404126 0 + 10161646 C e rheMac8.chr4 170372644 0 + 172585720 C e macFas5.chr4 169117944 0 - 170955103 C a score=3432.000000 s hg38.chr6_KB021644v2_alt 144318 8 + 185823 AATCAGCG s panPan2.chr6 171833971 8 + 173848474 AATCAGCA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11517194 8 - 12463322 AATCAGCG i gorGor5.CYUI01015032v1 C 0 I 27 s nomLeu3.chr3 156346747 8 + 157873769 AGTCAGTG i nomLeu3.chr3 C 0 C 0 e otoGar3.GL873575 10977942 896 - 12073884 I e saiBol1.JH378287 1332478 0 - 2905041 C e aotNan1.NW_018494782v1 1542425 58 - 1813869 I e cebCap1.NW_016107695v1 1297195 21 - 2164891 I e calJac3.chr4 169931953 0 + 171630274 C e dasNov3.JH569188 622772 513 + 760995 I e colAng1.NW_012114488v1 15647188 0 - 23502949 C e canFam3.chr1 56207656 40 + 122678785 I e chlSab2.chr13 96721691 0 + 98384682 C e cerAty1.NW_012002071v1 1435695 6 + 3144229 I e manLeu1.NW_012106474v1 8257274 4705 - 10857215 M e macNem1.NW_012011000v1 8404126 0 + 10161646 C e rheMac8.chr4 170372644 0 + 172585720 C e macFas5.chr4 169117944 0 - 170955103 C e panTro5.chr6 173601008 15 + 175400573 I a score=131939.000000 s hg38.chr6_KB021644v2_alt 144326 228 + 185823 TTGTGGAGGCAGCGTCGTTAGTCAGCGTCATGGAGGCGGCGTTGGTGGTCACTGTCGTGGAGGCCACGTTGAT----AGCATCATGGAGGCAgcgtcggtagtcagcgtcgtgggggcggcgtcggtagtcagcgtcgtggaggcagtgtcggt---------------------------agcgtcgtggaggccgcgtcggtgttcagcgtcgtggaggccacattggtggcgtcatggaggcggcattggtagtca------------------------------------------------------------------------------------- s panTro5.chr6 173601023 193 + 175400573 TTGTGGAGGCAGCGTCGGTAGTCAGCGTCATGGAGGCGGCGTTGGTGGTCACTGTCATGGAGGCCATGTTGAT----AGCATCATGGAGGCAGCGTCGGTAGTCAGCGTCGTGGGGGCGGC---------------------------GTCGGT---------------------------AGCGTCGTGGAGGCCGCGTCGGTGTTCAGCGTCGTGGAGGCCACGTTGGTGGCGTCATGGAGGCGGCATT--------------------------------------------------------------------------------------------- i panTro5.chr6 I 15 C 0 s panPan2.chr6 171833979 193 + 173848474 TTGTGGAGGCAGCGTCGGTAGTCAGCGTCATGGAGGCGGCGTTGGTGGTCACTGTCATGGAGGCCATGTTGAT----AGCATCATGGAAGCAGCGTCGGTAGTCAGCGTCGTGGGGGCGGC---------------------------GTCGGT---------------------------AGCGTCGTGGAGGCCGCGTCGGTGTTCAGCGTCGTGGAGGCCACGTTGGTGGCGTCATGGAGGCGGCATT--------------------------------------------------------------------------------------------- i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11517229 224 - 12463322 TTGTGGAGGCAGTGTCGGTAATCAGTGTCGTGGAGGCGGCGTTGGTGGTCACTGTCATGGAGGCCACGTTGAT----AGCATCATGGAGGCAGCGTCGGT----AGCGTCGTGGAGGCGGCATTGGTAGTCAGCGTCATGGAGGCAGTGTCGGT---------------------------AGCGTCGTGGAGGCCACGTCGGTGTTCAGCGTCTTGGAGGCCACGTTGGTGGCATCATGGAGGCGGCATTGGTAGTCA------------------------------------------------------------------------------------- i gorGor5.CYUI01015032v1 I 27 I 119 s nomLeu3.chr3 156346755 340 + 157873769 TCGTGGAGGCAGCGTTGGTAGCC----TCATGGAGGCGGCATTGGTAGTCAGCATCATGGAGGCAGCGTCAGTAGTCAGTGTTGTGGAGGCAGCGTCAGTAGTCAGTGTTGTGGAGGTGGCATCGGTAGTCAGCGTCATGGAGGTGGCATTGGTAGTGCCATGGAGGCGGCATTGGTAGTCAGCGTCATGGAGGCGGCGTCAGTATTCAGCATTGTGGAGGCGGCATTGGTAGCATCATGGAGGCGGCGTCGGTAGTCAGCGTCGTAGCGTTGTGGAGGTGGCATCAGTAGTCAGTGTCGTGGAGGCGGCGTCGGTGTTCAACATCGTGGAGGCCATGTTGGTA i nomLeu3.chr3 C 0 C 0 e otoGar3.GL873575 10977942 896 - 12073884 I e saiBol1.JH378287 1332478 0 - 2905041 C e aotNan1.NW_018494782v1 1542425 58 - 1813869 I e cebCap1.NW_016107695v1 1297195 21 - 2164891 I e calJac3.chr4 169931953 0 + 171630274 C e dasNov3.JH569188 622772 513 + 760995 I e colAng1.NW_012114488v1 15647188 0 - 23502949 C e canFam3.chr1 56207656 40 + 122678785 I e chlSab2.chr13 96721691 0 + 98384682 C e cerAty1.NW_012002071v1 1435695 6 + 3144229 I e manLeu1.NW_012106474v1 8257274 4705 - 10857215 M e macNem1.NW_012011000v1 8404126 0 + 10161646 C e rheMac8.chr4 170372644 0 + 172585720 C e macFas5.chr4 169117944 0 - 170955103 C a score=4706.000000 s hg38.chr6_KB021644v2_alt 144554 24 + 185823 gcgtcgtggaggcggcgtcggtag s panTro5.chr6 173601216 5 + 175400573 -------------------GGTAG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171834172 5 + 173848474 -------------------GGTAG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11517572 24 - 12463322 Gcgtcgtggaggcggcgtcagcgg i gorGor5.CYUI01015032v1 I 119 C 0 s nomLeu3.chr3 156347095 24 + 157873769 GCGTCATGGAGGTGGCGTTGGTAG i nomLeu3.chr3 C 0 C 0 e otoGar3.GL873575 10977942 896 - 12073884 I e saiBol1.JH378287 1332478 0 - 2905041 C e aotNan1.NW_018494782v1 1542425 58 - 1813869 I e cebCap1.NW_016107695v1 1297195 21 - 2164891 I e calJac3.chr4 169931953 0 + 171630274 C e dasNov3.JH569188 622772 513 + 760995 I e colAng1.NW_012114488v1 15647188 0 - 23502949 C e canFam3.chr1 56207656 40 + 122678785 I e chlSab2.chr13 96721691 0 + 98384682 C e cerAty1.NW_012002071v1 1435695 6 + 3144229 I e manLeu1.NW_012106474v1 8257274 4705 - 10857215 M e macNem1.NW_012011000v1 8404126 0 + 10161646 C e rheMac8.chr4 170372644 0 + 172585720 C e macFas5.chr4 169117944 0 - 170955103 C a score=25503.000000 s hg38.chr6_KB021644v2_alt 144578 19 + 185823 tcagcgtcgtggaggcggc s panTro5.chr6 173601221 19 + 175400573 TCAGCGTCGTGGAGGCGGC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171834177 19 + 173848474 TCAGCGTCGTGGAGGCGGC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11517596 19 - 12463322 tcggcgtcgtggaggtggt i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156347119 19 + 157873769 TCAGCGTCGTGGAGGTGGC i nomLeu3.chr3 C 0 C 0 s chlSab2.chr13 96721691 19 + 98384682 TCAGCGTCGTGGAGGCGGC i chlSab2.chr13 C 0 C 0 e otoGar3.GL873575 10977942 896 - 12073884 I e saiBol1.JH378287 1332478 0 - 2905041 C e aotNan1.NW_018494782v1 1542425 58 - 1813869 I e cebCap1.NW_016107695v1 1297195 21 - 2164891 I e calJac3.chr4 169931953 0 + 171630274 C e dasNov3.JH569188 622772 513 + 760995 I e colAng1.NW_012114488v1 15647188 0 - 23502949 C e canFam3.chr1 56207656 40 + 122678785 I e cerAty1.NW_012002071v1 1435695 6 + 3144229 I e manLeu1.NW_012106474v1 8257274 4705 - 10857215 M e macNem1.NW_012011000v1 8404126 0 + 10161646 C e rheMac8.chr4 170372644 0 + 172585720 C e macFas5.chr4 169117944 0 - 170955103 C a score=4117.000000 s hg38.chr6_KB021644v2_alt 144597 3 + 185823 gtc s panTro5.chr6 173601240 3 + 175400573 GTC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171834196 3 + 173848474 GTC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11517615 3 - 12463322 gtc i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156347138 3 + 157873769 ATC i nomLeu3.chr3 C 0 C 0 s chlSab2.chr13 96721710 3 + 98384682 CTC i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15647188 3 - 23502949 gtc i colAng1.NW_012114488v1 C 0 C 0 e otoGar3.GL873575 10977942 896 - 12073884 I e saiBol1.JH378287 1332478 0 - 2905041 C e aotNan1.NW_018494782v1 1542425 58 - 1813869 I e cebCap1.NW_016107695v1 1297195 21 - 2164891 I e calJac3.chr4 169931953 0 + 171630274 C e dasNov3.JH569188 622772 513 + 760995 I e canFam3.chr1 56207656 40 + 122678785 I e cerAty1.NW_012002071v1 1435695 6 + 3144229 I e manLeu1.NW_012106474v1 8257274 4705 - 10857215 M e macNem1.NW_012011000v1 8404126 0 + 10161646 C e rheMac8.chr4 170372644 0 + 172585720 C e macFas5.chr4 169117944 0 - 170955103 C a score=52155.000000 s hg38.chr6_KB021644v2_alt 144600 14 + 185823 ggtagtcagcgtcA s panTro5.chr6 173601243 14 + 175400573 GGTAGTCAGCGTCA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171834199 14 + 173848474 GGTAGTCAGCGTCG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11517618 14 - 12463322 ggtggtcggcgtcg i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156347141 14 + 157873769 GGTAGTCAGCGTCA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170372644 14 + 172585720 ggtagtcagcgtcg i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169117944 14 - 170955103 ggtaGTCAGCGTCG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8404126 14 + 10161646 ggtagtcagcgtcg i macNem1.NW_012011000v1 C 0 C 0 s chlSab2.chr13 96721713 14 + 98384682 GGCAGTCAGCGTCC i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15647191 14 - 23502949 ggtagtcagcgtcc i colAng1.NW_012114488v1 C 0 C 0 e otoGar3.GL873575 10977942 896 - 12073884 I e saiBol1.JH378287 1332478 0 - 2905041 C e aotNan1.NW_018494782v1 1542425 58 - 1813869 I e cebCap1.NW_016107695v1 1297195 21 - 2164891 I e calJac3.chr4 169931953 0 + 171630274 C e dasNov3.JH569188 622772 513 + 760995 I e canFam3.chr1 56207656 40 + 122678785 I e cerAty1.NW_012002071v1 1435695 6 + 3144229 I e manLeu1.NW_012106474v1 8257274 4705 - 10857215 M a score=24460.000000 s hg38.chr6_KB021644v2_alt 144614 5 + 185823 TGGAG s panTro5.chr6 173601257 5 + 175400573 TGGAG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171834213 5 + 173848474 TGGAG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11517632 5 - 12463322 TGGAG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156347155 5 + 157873769 TGGAG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170372658 5 + 172585720 tggag i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169117958 5 - 170955103 TGGAG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8404140 5 + 10161646 tggag i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1435701 5 + 3144229 tggag i cerAty1.NW_012002071v1 I 6 C 0 s chlSab2.chr13 96721727 5 + 98384682 GGGAG i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15647205 5 - 23502949 tggag i colAng1.NW_012114488v1 C 0 C 0 e otoGar3.GL873575 10977942 896 - 12073884 I e saiBol1.JH378287 1332478 0 - 2905041 C e aotNan1.NW_018494782v1 1542425 58 - 1813869 I e cebCap1.NW_016107695v1 1297195 21 - 2164891 I e calJac3.chr4 169931953 0 + 171630274 C e dasNov3.JH569188 622772 513 + 760995 I e canFam3.chr1 56207656 40 + 122678785 I e manLeu1.NW_012106474v1 8257274 4705 - 10857215 M a score=30393.000000 s hg38.chr6_KB021644v2_alt 144619 7 + 185823 GCAGTGT s panTro5.chr6 173601262 7 + 175400573 GCAGTGT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171834218 7 + 173848474 GCAGTGT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11517637 7 - 12463322 GCGGCGT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156347160 7 + 157873769 GCAGTGT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170372663 7 + 172585720 gtggtgt i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169117963 7 - 170955103 GCGGTGT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8404145 7 + 10161646 gcggtgt i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1435706 7 + 3144229 gtggtgt i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96721732 7 + 98384682 TCAGTGT i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15647210 7 - 23502949 gcgttgt i colAng1.NW_012114488v1 C 0 C 0 s saiBol1.JH378287 1332478 7 - 2905041 gcagcgt i saiBol1.JH378287 C 0 C 0 e otoGar3.GL873575 10977942 896 - 12073884 I e aotNan1.NW_018494782v1 1542425 58 - 1813869 I e cebCap1.NW_016107695v1 1297195 21 - 2164891 I e calJac3.chr4 169931953 0 + 171630274 C e dasNov3.JH569188 622772 513 + 760995 I e canFam3.chr1 56207656 40 + 122678785 I e manLeu1.NW_012106474v1 8257274 4705 - 10857215 M a score=63778.000000 s hg38.chr6_KB021644v2_alt 144626 10 + 185823 TGATAATCAA s panTro5.chr6 173601269 10 + 175400573 TGATAATCAA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171834225 10 + 173848474 TGATAATCAA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11517644 10 - 12463322 TGATAATCAG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156347167 10 + 157873769 TGATAATCAG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170372670 10 + 172585720 tgataatcag i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169117970 10 - 170955103 TGATAATCAG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8404152 10 + 10161646 tgataatcag i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1435713 10 + 3144229 tgataatcag i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96721739 10 + 98384682 TGATAATCAG i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15647217 10 - 23502949 tgataatcag i colAng1.NW_012114488v1 C 0 C 0 s saiBol1.JH378287 1332485 10 - 2905041 tgatcattag i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1297216 10 - 2164891 tgataattag i cebCap1.NW_016107695v1 I 21 C 0 e otoGar3.GL873575 10977942 896 - 12073884 I e aotNan1.NW_018494782v1 1542425 58 - 1813869 I e calJac3.chr4 169931953 0 + 171630274 C e dasNov3.JH569188 622772 513 + 760995 I e canFam3.chr1 56207656 40 + 122678785 I e manLeu1.NW_012106474v1 8257274 4705 - 10857215 M a score=102152.000000 s hg38.chr6_KB021644v2_alt 144636 13 + 185823 CATCAGCTCAGGG s panTro5.chr6 173601279 13 + 175400573 CATCAGCTCAGGG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171834235 13 + 173848474 CATCAGCTCAGGG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11517654 13 - 12463322 CATCAGCTCAGGG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156347177 13 + 157873769 CATCAGCTCAGGG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170372680 13 + 172585720 catcagctcaggg i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169117980 13 - 170955103 CATCAGCTCAGGG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8404162 13 + 10161646 catcagctcaggg i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1435723 13 + 3144229 catcagctcaggg i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96721749 13 + 98384682 CATCAGCTCAGGG i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15647227 13 - 23502949 catcagctcaggc i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169931953 13 + 171630274 catcagctgaggG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1332495 13 - 2905041 catcagctgaggg i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1297226 13 - 2164891 catcagctgagag i cebCap1.NW_016107695v1 C 0 C 0 e otoGar3.GL873575 10977942 896 - 12073884 I e aotNan1.NW_018494782v1 1542425 58 - 1813869 I e dasNov3.JH569188 622772 513 + 760995 I e canFam3.chr1 56207656 40 + 122678785 I e manLeu1.NW_012106474v1 8257274 4705 - 10857215 M a score=83690.000000 s hg38.chr6_KB021644v2_alt 144649 13 + 185823 CGTCCTTGATCCG s panTro5.chr6 173601292 13 + 175400573 CGTCCTTGATCCG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171834248 13 + 173848474 CGTCCTTGATCCG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11517667 13 - 12463322 CGTCCTTGATCCG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156347190 13 + 157873769 TGTCCTTGATCCG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170372693 13 + 172585720 cgtcctccatctg i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169117993 13 - 170955103 CGTCCTCCATCTG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8404175 13 + 10161646 cgtcctccatctg i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1435736 13 + 3144229 cgtcctccatctg i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96721762 13 + 98384682 CGTCCTCCATCTG i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15647240 13 - 23502949 cgtccttcatctg i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169931966 5 + 171630274 CGTCC-------- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1332508 13 - 2905041 cgtccttcatccg i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1297239 13 - 2164891 cgtccttcatctg i cebCap1.NW_016107695v1 C 0 C 0 s dasNov3.JH569188 623285 13 + 760995 catcctttatttg i dasNov3.JH569188 I 513 C 0 e otoGar3.GL873575 10977942 896 - 12073884 I e aotNan1.NW_018494782v1 1542425 58 - 1813869 I e canFam3.chr1 56207656 40 + 122678785 I e manLeu1.NW_012106474v1 8257274 4705 - 10857215 M a score=178945.000000 s hg38.chr6_KB021644v2_alt 144662 25 + 185823 CGTCC-CCTCAGTCTT-----------CCCTCCTGCG s panTro5.chr6 173601305 25 + 175400573 CGTCC-CCTCAGTCTT-----------CCCTCCTGCG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171834261 25 + 173848474 CGTCC-CCTCAGTCTT-----------CCCTCCTGCG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11517680 25 - 12463322 CGTCC-CCTCAGTCTT-----------CCCTCCTGCG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156347203 25 + 157873769 TGTCC-CCTCAGTCTT-----------CCCTCCTGCc i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170372706 25 + 172585720 tgtcc-cctcagtctt-----------ccctcctgcc i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169118006 25 - 170955103 TGTCC-CCTCAGTCTT-----------CCCTCCTGCc i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8404188 25 + 10161646 tgtcc-cctcagtctt-----------ccctcctgcc i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1435749 25 + 3144229 tgtcc-cctcagtctt-----------ccctcctgcc i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96721775 25 + 98384682 TGTCC-CCTCAGTCTT-----------CCCTCCTGCc i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15647253 25 - 23502949 tgtcc-cctcagtctt-----------ccctcctgcc i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169931971 20 + 171630274 ------CCTCAGTCTT-----------CCCTCCCGCC i calJac3.chr4 C 0 I 12 s saiBol1.JH378287 1332521 22 - 2905041 cgt---cccctgtctt-----------ccct-ccgcc i saiBol1.JH378287 C 0 I 12 s cebCap1.NW_016107695v1 1297252 25 - 2164891 tgtcc-cctcagtctt-----------ccctcctgcc i cebCap1.NW_016107695v1 C 0 I 11 s canFam3.chr1 56207696 22 + 122678785 cgtccatcccaaggtc-----------ccctcc---- i canFam3.chr1 I 40 C 0 s dasNov3.JH569188 623298 36 + 760995 cattt-ccttagtttttacctaatatcctcttctgtt i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10977942 896 - 12073884 I e aotNan1.NW_018494782v1 1542425 58 - 1813869 I e manLeu1.NW_012106474v1 8257274 4705 - 10857215 M a score=563335.000000 s hg38.chr6_KB021644v2_alt 144687 62 + 185823 -caggatcccacgtg-------acac-----ttagtcctcatgtctccgcagcttcctctgctctgtgacagttt s panTro5.chr6 173601330 62 + 175400573 -caggatcccacgtg-------acac-----ttagtcctcatgtctccgcagcttcctctgctctgtgacagttt i panTro5.chr6 C 0 C 0 s panPan2.chr6 171834286 62 + 173848474 -caggatcccacgtg-------acac-----ttagtcctcatgtctccgcagcttcctctgctctgtgacagttt i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11517705 62 - 12463322 -caggatcccatgtg-------acac-----ttagtcctcatgtctccgcagcttcctctgctctgtgacagttt i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156347228 62 + 157873769 -caggatcccacgtg-------acac-----ttagtcctcacatctccacagcttcctctgctctgtgacagttt i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170372731 60 + 172585720 -caggatcccacgta-------acac-------agtcctcacgtctccgcagcttcctctgctctgtgacagttt i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169118031 60 - 170955103 -caggatcccacgta-------acac-------agtcctcacgtctccgcagcttcctctgctctgtgacagttt i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8404213 60 + 10161646 -caggatcccacgta-------acac-------agtcctcacgtctccgcagcttcctctgctctgtgacagttt i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1435774 62 + 3144229 -caggatcccacgtg-------acac-----ttagtcctcacgtctccgcagcttcctctgctctgtgacagttt i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96721800 62 + 98384682 -caggatcccacgtg-------acac-----ttagtcctcacgtctccgcagcttcctctgctctgtgacagttt i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15647278 62 - 23502949 -caggaccccaagtg-------accc-----ttagtcctcatgtctctgcagcttcctctgctctgtgacagttt i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169932003 62 + 171630274 -caggaccccacgtg-------gcac-----ttagtcctcacgtctctgcagcttcctctgcttgatgacggttt i calJac3.chr4 I 12 C 0 s saiBol1.JH378287 1332555 62 - 2905041 -caggatcccacgtg-------acac-----ttggtcctcatgtccctgcagccgcctctactctgtgacggttC i saiBol1.JH378287 I 12 C 0 s cebCap1.NW_016107695v1 1297288 56 - 2164891 -------cccacgtg-------acac-----ttcgtcctcatgtctctgcagcttcctctgctctgtgacgattt i cebCap1.NW_016107695v1 I 11 C 0 s aotNan1.NW_018494782v1 1542483 62 - 1813869 -caggatcccgcgtg-------acac-----ttggtcctcatgtctctgcagcttcctctgctctgtgacggttt i aotNan1.NW_018494782v1 I 58 C 0 s canFam3.chr1 56207718 59 + 122678785 --aggatcctac--a-------gcag-----ttagtgaccatatctcctgcctttcctatccactgtgaccattt i canFam3.chr1 C 0 I 54 s dasNov3.JH569188 623334 75 + 760995 ctagaattccacgtagggtatcacactgtgtttaggtagcatgtctcggtagccttctcttcactatgacagtCT i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10977942 896 - 12073884 I e manLeu1.NW_012106474v1 8257274 4705 - 10857215 M a score=290523.000000 s hg38.chr6_KB021644v2_alt 144749 37 + 185823 GATGTGCTCTTTTCAAAGAATGTGTTTCA--GATTCTTC s panTro5.chr6 173601392 37 + 175400573 GATGTGCTCTTTTCAAAGAATGTGTTTCA--GATTCTTC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171834348 37 + 173848474 GATGTGCTCTTTTCAAAGAATGTGTTTCA--GATTCTTC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11517767 37 - 12463322 GATGTGCTCTTTTCAAAGAATGTGTTTCA--GATTCTTC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156347290 37 + 157873769 GACGTGCTCTTTTCAAAGAATGTGTTTAA--GATTCTTC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170372791 37 + 172585720 GACGTGCTCTTTTTGAAGAATGTGTTTAA--GATTCTTC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169118091 37 - 170955103 GACGTGCTCTTTTTGAAGAATGTGTTTAA--GATTCTTC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8404273 37 + 10161646 GACGTGCTCTTTTTGAAGAATGTGTTTAA--GATTCTTC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1435836 37 + 3144229 GACGTGCTCTTTTTGAAGAATATGTTTAA--GATTCTTC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96721862 37 + 98384682 GACGTGCTCTTTTTCAAGAATGTGTTTAA--GATTCTTC i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15647340 37 - 23502949 gacctgctctttttgaagaATGTGTTTGA--GATTCTTC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169932065 39 + 171630274 GATGTGGTCTTTTTGAACAATGTGTTTAAATGACGCTTC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1332617 39 - 2905041 GATGTGGTCTTTTCGAACAATGTGTTTAAATGATGCTTC i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1297344 39 - 2164891 GATGTGGTCTTTTTGAACAATGTGTTTAAATGATGCTTC i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1542545 39 - 1813869 GATGTGGTCTTTTTGAGCAATGTGTTTAAATGATGCTTC i aotNan1.NW_018494782v1 C 0 C 0 s dasNov3.JH569188 623409 37 + 760995 GACATGGTAGTTTTAAAGGATAGATTTAA--ATTACTTA i dasNov3.JH569188 C 0 I 21 e otoGar3.GL873575 10977942 896 - 12073884 I e canFam3.chr1 56207777 54 + 122678785 I e manLeu1.NW_012106474v1 8257274 4705 - 10857215 M a score=498882.000000 s hg38.chr6_KB021644v2_alt 144786 47 + 185823 TTAATTATTCCAAAAGCCCATTATCTAAAGTGGAATTCTAAATTTCC s panTro5.chr6 173601429 47 + 175400573 TTAATTATTCCAAAAGCCCATTATCTAAAGTGGAATTCTAAATTTCC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171834385 47 + 173848474 TTAATTATTCCAAAAGCCCATTATCTAAAGTGGAATTCTAAATTTCC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11517804 47 - 12463322 TTAATTATTCCAAAAGCCCATTACCTAAAGTGGAATTCTAAATCTCC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156347327 47 + 157873769 TTAATTATTCCAAAAGCACATTACCTAAAGTGAAATTCTAAATCTCC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170372828 47 + 172585720 TTAATTATTCCAAAAGCCCATTACCTAAAGTGGAATTCTAAATCTCC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169118128 47 - 170955103 TTAATTATTCCAAAAGCCCATTACCTAAAGTGGAATTCTAAATCTCC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8404310 47 + 10161646 TTAATTATTCCAAAAGCCCATTACCTAAAGTGGAATTCTAAATCTCC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1435873 47 + 3144229 TTAATTATTCCAAAAGCCCATTACCTAAAGTGGAATTCTAAATCTCC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96721899 47 + 98384682 TTAATTATTCCAAAAGCCCATTACCTAAAGTGGAATTCTAAATCTCC i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15647377 47 - 23502949 TTAATTATTCCAAAAGCCCATTACCTAAAGTGGAATTCTAAATCTCC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169932104 47 + 171630274 TTAATTATTCCAAAAGTCCATTACCTAAAGTGGAATTCTAAATCTCC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1332656 47 - 2905041 TTAATTATTCCAAAAGTCCATTACCTAAAGTGGAATTCTAACTCTCC i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1297383 47 - 2164891 TTAATTATTCCAAAAGTCCATTACCTAAAGTGGAACTGTAAATCTCC i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1542584 47 - 1813869 TTAATTATTCCAAAAGTCCGTTACCTAAAGTGGAATTCTAAATCTCC i aotNan1.NW_018494782v1 C 0 C 0 s canFam3.chr1 56207831 47 + 122678785 TCAACTATTCTTTAAACTTGCTACTGAAAGTGGAATTCTGAGATTCC i canFam3.chr1 I 54 I 4 s dasNov3.JH569188 623467 47 + 760995 TTAATTATTCATTAAGCCTGGTACAGAAGGTGGAATACTAAATTCCC i dasNov3.JH569188 I 21 C 0 e otoGar3.GL873575 10977942 896 - 12073884 I e manLeu1.NW_012106474v1 8257274 4705 - 10857215 M a score=30855.000000 s hg38.chr6_KB021644v2_alt 144833 4 + 185823 --CTTT s panTro5.chr6 173601476 4 + 175400573 --CTTT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171834432 4 + 173848474 --CTTT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11517851 4 - 12463322 --CTTT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156347374 4 + 157873769 --CTTT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170372875 4 + 172585720 --CTTT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169118175 4 - 170955103 --CTTT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8404357 4 + 10161646 --CTTT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1435920 4 + 3144229 --CTTT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96721946 4 + 98384682 --CTTT i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15647424 4 - 23502949 --CTTT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169932151 4 + 171630274 --CTTT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1332703 4 - 2905041 --CTTT i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1297430 4 - 2164891 --CTTT i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1542631 4 - 1813869 --CTTT i aotNan1.NW_018494782v1 C 0 C 0 s dasNov3.JH569188 623514 4 + 760995 AGGT-- i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10977942 896 - 12073884 I e canFam3.chr1 56207878 4 + 122678785 I e manLeu1.NW_012106474v1 8257274 4705 - 10857215 M a score=17402.000000 s hg38.chr6_KB021644v2_alt 144837 2 + 185823 AA s panTro5.chr6 173601480 2 + 175400573 AA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171834436 2 + 173848474 AA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11517855 2 - 12463322 AA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156347378 2 + 157873769 AA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170372879 2 + 172585720 aa i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169118179 2 - 170955103 aa i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8404361 2 + 10161646 AA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1435924 2 + 3144229 aa i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96721950 2 + 98384682 aa i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15647428 2 - 23502949 AA i colAng1.NW_012114488v1 C 0 I 1556 s calJac3.chr4 169932155 2 + 171630274 AA i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1297434 2 - 2164891 AA i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1542635 2 - 1813869 AA i aotNan1.NW_018494782v1 C 0 C 0 s dasNov3.JH569188 623518 2 + 760995 GA i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10977942 896 - 12073884 I e saiBol1.JH378287 1332707 0 - 2905041 C e canFam3.chr1 56207878 4 + 122678785 I e manLeu1.NW_012106474v1 8257274 4705 - 10857215 M a score=15678.000000 s hg38.chr6_KB021644v2_alt 144839 2 + 185823 GA s panTro5.chr6 173601482 2 + 175400573 GA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171834438 2 + 173848474 GA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11517857 2 - 12463322 GA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156347380 2 + 157873769 GA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170372881 2 + 172585720 ga i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169118181 2 - 170955103 ga i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8404363 2 + 10161646 GA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1435926 2 + 3144229 ga i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96721952 2 + 98384682 ga i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169932157 2 + 171630274 GA i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1297436 2 - 2164891 GA i cebCap1.NW_016107695v1 C 0 I 3 s aotNan1.NW_018494782v1 1542637 2 - 1813869 GA i aotNan1.NW_018494782v1 C 0 I 3 s dasNov3.JH569188 623520 2 + 760995 AA i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10977942 896 - 12073884 I e saiBol1.JH378287 1332707 0 - 2905041 C e colAng1.NW_012114488v1 15647430 1556 - 23502949 I e canFam3.chr1 56207878 4 + 122678785 I e manLeu1.NW_012106474v1 8257274 4705 - 10857215 M a score=13662.000000 s hg38.chr6_KB021644v2_alt 144841 3 + 185823 CAT s panTro5.chr6 173601484 3 + 175400573 AAT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171834440 3 + 173848474 AAT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11517859 3 - 12463322 AAT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156347382 3 + 157873769 AAT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170372883 3 + 172585720 aat i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169118183 3 - 170955103 aat i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8404365 3 + 10161646 AAT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1435928 3 + 3144229 aat i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96721954 3 + 98384682 aat i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169932159 2 + 171630274 -AT i calJac3.chr4 C 0 C 0 s dasNov3.JH569188 623522 2 + 760995 -AT i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10977942 896 - 12073884 I e saiBol1.JH378287 1332707 0 - 2905041 C e aotNan1.NW_018494782v1 1542639 3 - 1813869 I e cebCap1.NW_016107695v1 1297438 3 - 2164891 I e colAng1.NW_012114488v1 15647430 1556 - 23502949 I e canFam3.chr1 56207878 4 + 122678785 I e manLeu1.NW_012106474v1 8257274 4705 - 10857215 M a score=25025.000000 s hg38.chr6_KB021644v2_alt 144844 5 + 185823 AAATA s panTro5.chr6 173601487 5 + 175400573 AAATA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171834443 5 + 173848474 AAATA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11517862 5 - 12463322 AAATA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156347385 5 + 157873769 AAATA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170372886 5 + 172585720 aaata i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169118186 5 - 170955103 aaata i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8404368 5 + 10161646 AAATA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1435931 5 + 3144229 aaata i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96721957 5 + 98384682 aaata i chlSab2.chr13 C 0 C 0 s dasNov3.JH569188 623524 5 + 760995 AAATA i dasNov3.JH569188 C 0 I 106 e otoGar3.GL873575 10977942 896 - 12073884 I e saiBol1.JH378287 1332707 0 - 2905041 C e aotNan1.NW_018494782v1 1542639 3 - 1813869 I e cebCap1.NW_016107695v1 1297438 3 - 2164891 I e calJac3.chr4 169932161 0 + 171630274 C e colAng1.NW_012114488v1 15647430 1556 - 23502949 I e canFam3.chr1 56207878 4 + 122678785 I e manLeu1.NW_012106474v1 8257274 4705 - 10857215 M a score=11373.000000 s hg38.chr6_KB021644v2_alt 144849 6 + 185823 GCCAGg s panTro5.chr6 173601492 6 + 175400573 GCCAGg i panTro5.chr6 C 0 C 0 s panPan2.chr6 171834448 6 + 173848474 GCCAGg i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11517867 6 - 12463322 GCCAGg i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156347390 1 + 157873769 g----- i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170372891 6 + 172585720 gccagg i rheMac8.chr4 C 0 I 433 s macNem1.NW_012011000v1 8404373 6 + 10161646 gccagg i macNem1.NW_012011000v1 C 0 I 675 s cerAty1.NW_012002071v1 1435936 6 + 3144229 gccagg i cerAty1.NW_012002071v1 C 0 I 413 s chlSab2.chr13 96721962 6 + 98384682 ggcagg i chlSab2.chr13 C 0 I 514 e otoGar3.GL873575 10977942 896 - 12073884 I e saiBol1.JH378287 1332707 0 - 2905041 C e aotNan1.NW_018494782v1 1542639 3 - 1813869 I e cebCap1.NW_016107695v1 1297438 3 - 2164891 I e calJac3.chr4 169932161 0 + 171630274 C e dasNov3.JH569188 623529 106 + 760995 I e colAng1.NW_012114488v1 15647430 1556 - 23502949 I e canFam3.chr1 56207878 4 + 122678785 I e manLeu1.NW_012106474v1 8257274 4705 - 10857215 M e macFas5.chr4 169118191 0 - 170955103 C a score=155364.000000 s hg38.chr6_KB021644v2_alt 144855 175 + 185823 gccaggcgcagtggctcactcctgtagtcccggcactttgggaggccgaggtgggc--agatcac--gaggtcaggagatcgagaccatcctgggctaacacggtgaaacactgtctctactaaaaaataca-----aaaaattcgccgggcgtggt-gacaggtac--------ctgtagtcccagctactc s panTro5.chr6 173601498 175 + 175400573 gccaggcgcagtggctcactcctgtagtcccagcactttgggaggccgaggcgggc--ggatcac--gaggtcaggagatcgagaccatcctgggctaacacggtgaaacactgtctctactaaaaaataca-----aaaaattcgccaggcgtggt-gacaggtgc--------ctgtagtcccagctactc i panTro5.chr6 C 0 C 0 s panPan2.chr6 171834454 175 + 173848474 gccaggcgcagtggctcactcctgtagtcccagcactttgggaggccgaggcgggc--ggatcac--gaggtcaggagatcgagaccatcctgggctaacacggtgaaacactgtctctactaaaaaataca-----aaaaattcgccaggcgtagt-gacaggtgc--------ctgtagtcccagctactc i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11517873 175 - 12463322 gccaggcgtggtggctcactcctgtagtcccagcactttgggaggccaaggtgggc--ggatcac--ggggtcaggagatcaagaccatcctgggctaacacgatgaaacactgtctctactaaaaaataca-----aaaaattcgccaggcgtggt-gacaggtgc--------ctgtagacccagctactc i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156347391 147 + 157873769 --------------------cctgtaatcccagcactttgggaggctgaggggggc--agatcac--gaggtcaggagatcgagac-------------cacagtgaaaccccatctctactaaaaaaaaaaaatacaaaaattagccgggcgtggtgggtgggcac--------ctgtagt-ccagctactc i nomLeu3.chr3 C 0 M 305 s macFas5.chr4 169118191 180 - 170955103 gccaggcacagtggctcatgcctgtgatcccagcaccctgggaggctgaagcaggctgggttcacttaagcccaggggtccaagaccaacctgggc-aacatagtgaggccttatctctacaaaat-----------aaaaattgacaagatattgt-ggtgtaggctgttgaggccgtggccccaactactc i macFas5.chr4 C 0 C 0 e otoGar3.GL873575 10977942 896 - 12073884 I e saiBol1.JH378287 1332707 0 - 2905041 C e aotNan1.NW_018494782v1 1542639 3 - 1813869 I e cebCap1.NW_016107695v1 1297438 3 - 2164891 I e calJac3.chr4 169932161 0 + 171630274 C e dasNov3.JH569188 623529 106 + 760995 I e colAng1.NW_012114488v1 15647430 1556 - 23502949 I e canFam3.chr1 56207878 4 + 122678785 I e chlSab2.chr13 96721968 514 + 98384682 I e cerAty1.NW_012002071v1 1435942 413 + 3144229 I e manLeu1.NW_012106474v1 8257274 4705 - 10857215 M e macNem1.NW_012011000v1 8404379 675 + 10161646 I e rheMac8.chr4 170372897 433 + 172585720 I a score=15104.000000 s hg38.chr6_KB021644v2_alt 145030 18 + 185823 gggaggctgaggcatgag s panTro5.chr6 173601673 18 + 175400573 gggaggctgaggcatgag i panTro5.chr6 C 0 C 0 s panPan2.chr6 171834629 18 + 173848474 gggaggctgaggcatgag i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11518048 18 - 12463322 gggaggctgaggcatgag i gorGor5.CYUI01015032v1 C 0 C 0 s macFas5.chr4 169118371 18 - 170955103 aggaggctgaggtgggag i macFas5.chr4 C 0 C 0 e otoGar3.GL873575 10977942 896 - 12073884 I e saiBol1.JH378287 1332707 0 - 2905041 C e aotNan1.NW_018494782v1 1542639 3 - 1813869 I e cebCap1.NW_016107695v1 1297438 3 - 2164891 I e calJac3.chr4 169932161 0 + 171630274 C e dasNov3.JH569188 623529 106 + 760995 I e colAng1.NW_012114488v1 15647430 1556 - 23502949 I e canFam3.chr1 56207878 4 + 122678785 I e chlSab2.chr13 96721968 514 + 98384682 I e cerAty1.NW_012002071v1 1435942 413 + 3144229 I e nomLeu3.chr3 156347538 305 + 157873769 M e manLeu1.NW_012106474v1 8257274 4705 - 10857215 M e macNem1.NW_012011000v1 8404379 675 + 10161646 I e rheMac8.chr4 170372897 433 + 172585720 I a score=49215.000000 s hg38.chr6_KB021644v2_alt 145048 47 + 185823 aatggtgtgaa-cccgggaggcagagcttgcagtgagccgagattgag s panTro5.chr6 173601691 47 + 175400573 aatggtgtgaa-cccgggaggcagagcttgcagtgagtcgagattgag i panTro5.chr6 C 0 C 0 s panPan2.chr6 171834647 47 + 173848474 aatggtgtgaa-cccgggaggcagagcttgcagtgagtcgagattgAG i panPan2.chr6 C 0 M 539 s gorGor5.CYUI01015032v1 11518066 47 - 12463322 aatggtgtgaa-cccgggaggcagagcttgcagtgagcccagattaag i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156347843 47 + 157873769 aatggcatgaa-cctgggaggcagagcttgaagtgagcagagattgag i nomLeu3.chr3 M 305 C 0 s macFas5.chr4 169118389 48 - 170955103 gatggcttgagccccaggaggtggagactgcagtgagccaggatcgca i macFas5.chr4 C 0 C 0 e otoGar3.GL873575 10977942 896 - 12073884 I e saiBol1.JH378287 1332707 0 - 2905041 C e aotNan1.NW_018494782v1 1542639 3 - 1813869 I e cebCap1.NW_016107695v1 1297438 3 - 2164891 I e calJac3.chr4 169932161 0 + 171630274 C e dasNov3.JH569188 623529 106 + 760995 I e colAng1.NW_012114488v1 15647430 1556 - 23502949 I e canFam3.chr1 56207878 4 + 122678785 I e chlSab2.chr13 96721968 514 + 98384682 I e cerAty1.NW_012002071v1 1435942 413 + 3144229 I e manLeu1.NW_012106474v1 8257274 4705 - 10857215 M e macNem1.NW_012011000v1 8404379 675 + 10161646 I e rheMac8.chr4 170372897 433 + 172585720 I a score=47438.000000 s hg38.chr6_KB021644v2_alt 145095 67 + 185823 ccactgcactccagcctggatgacaaagcgagactccatctcaaaaaaaaaaaaaaa----------gacagaaaga s panTro5.chr6 173601738 67 + 175400573 ccactgcactccagcctggatgacaaagcgagactccatcgcaaaaaaaaaaaaaaa----------gacagaaaga i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11518113 64 - 12463322 ccactgcactccagcctggatgacaaagcgagactccatctcaaaaaaaaaaaaaaa-------------agaaaga i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156347890 77 + 157873769 ccactgcactccagcctggatgacagagcgagactccatctcaaaaaaaaaaaaaaaaagaaagaaagaaagaaaga i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169118437 69 - 170955103 ccactgtactccagcctgggtagcagagcaagaccttgtctcagaaataaataagaa--------aggaaagaaaga i macFas5.chr4 C 0 C 0 e otoGar3.GL873575 10977942 896 - 12073884 I e saiBol1.JH378287 1332707 0 - 2905041 C e aotNan1.NW_018494782v1 1542639 3 - 1813869 I e cebCap1.NW_016107695v1 1297438 3 - 2164891 I e calJac3.chr4 169932161 0 + 171630274 C e dasNov3.JH569188 623529 106 + 760995 I e colAng1.NW_012114488v1 15647430 1556 - 23502949 I e canFam3.chr1 56207878 4 + 122678785 I e chlSab2.chr13 96721968 514 + 98384682 I e cerAty1.NW_012002071v1 1435942 413 + 3144229 I e manLeu1.NW_012106474v1 8257274 4705 - 10857215 M e macNem1.NW_012011000v1 8404379 675 + 10161646 I e rheMac8.chr4 170372897 433 + 172585720 I e panPan2.chr6 171834694 539 + 173848474 M a score=6960.000000 s hg38.chr6_KB021644v2_alt 145162 5 + 185823 aagaa s panTro5.chr6 173601805 5 + 175400573 aagaa i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11518177 5 - 12463322 aagaa i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156347967 5 + 157873769 aagaa i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169118506 5 - 170955103 aagaa i macFas5.chr4 C 0 I 84 s saiBol1.JH378287 1332707 5 - 2905041 AAGAA i saiBol1.JH378287 C 0 C 0 e otoGar3.GL873575 10977942 896 - 12073884 I e aotNan1.NW_018494782v1 1542639 3 - 1813869 I e cebCap1.NW_016107695v1 1297438 3 - 2164891 I e calJac3.chr4 169932161 0 + 171630274 C e dasNov3.JH569188 623529 106 + 760995 I e colAng1.NW_012114488v1 15647430 1556 - 23502949 I e canFam3.chr1 56207878 4 + 122678785 I e chlSab2.chr13 96721968 514 + 98384682 I e cerAty1.NW_012002071v1 1435942 413 + 3144229 I e manLeu1.NW_012106474v1 8257274 4705 - 10857215 M e macNem1.NW_012011000v1 8404379 675 + 10161646 I e rheMac8.chr4 170372897 433 + 172585720 I e panPan2.chr6 171834694 539 + 173848474 M a score=910.000000 s hg38.chr6_KB021644v2_alt 145167 1 + 185823 A s panTro5.chr6 173601810 1 + 175400573 A i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11518182 1 - 12463322 a i gorGor5.CYUI01015032v1 C 0 I 120 s nomLeu3.chr3 156347972 1 + 157873769 a i nomLeu3.chr3 C 0 C 0 s saiBol1.JH378287 1332712 1 - 2905041 A i saiBol1.JH378287 C 0 C 0 e otoGar3.GL873575 10977942 896 - 12073884 I e aotNan1.NW_018494782v1 1542639 3 - 1813869 I e cebCap1.NW_016107695v1 1297438 3 - 2164891 I e calJac3.chr4 169932161 0 + 171630274 C e dasNov3.JH569188 623529 106 + 760995 I e colAng1.NW_012114488v1 15647430 1556 - 23502949 I e canFam3.chr1 56207878 4 + 122678785 I e chlSab2.chr13 96721968 514 + 98384682 I e cerAty1.NW_012002071v1 1435942 413 + 3144229 I e manLeu1.NW_012106474v1 8257274 4705 - 10857215 M e macNem1.NW_012011000v1 8404379 675 + 10161646 I e rheMac8.chr4 170372897 433 + 172585720 I e macFas5.chr4 169118511 84 - 170955103 I e panPan2.chr6 171834694 539 + 173848474 M a score=546.000000 s hg38.chr6_KB021644v2_alt 145168 1 + 185823 T s panTro5.chr6 173601811 1 + 175400573 T i panTro5.chr6 C 0 C 0 s nomLeu3.chr3 156347973 1 + 157873769 T i nomLeu3.chr3 C 0 C 0 s saiBol1.JH378287 1332713 1 - 2905041 T i saiBol1.JH378287 C 0 C 0 e otoGar3.GL873575 10977942 896 - 12073884 I e aotNan1.NW_018494782v1 1542639 3 - 1813869 I e cebCap1.NW_016107695v1 1297438 3 - 2164891 I e calJac3.chr4 169932161 0 + 171630274 C e dasNov3.JH569188 623529 106 + 760995 I e colAng1.NW_012114488v1 15647430 1556 - 23502949 I e canFam3.chr1 56207878 4 + 122678785 I e chlSab2.chr13 96721968 514 + 98384682 I e cerAty1.NW_012002071v1 1435942 413 + 3144229 I e manLeu1.NW_012106474v1 8257274 4705 - 10857215 M e macNem1.NW_012011000v1 8404379 675 + 10161646 I e rheMac8.chr4 170372897 433 + 172585720 I e gorGor5.CYUI01015032v1 11518183 120 - 12463322 I e macFas5.chr4 169118511 84 - 170955103 I e panPan2.chr6 171834694 539 + 173848474 M a score=1270.000000 s hg38.chr6_KB021644v2_alt 145169 4 + 185823 Agcc s panTro5.chr6 173601812 4 + 175400573 Agcc i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11518303 4 - 12463322 Agcc i gorGor5.CYUI01015032v1 I 120 C 0 s nomLeu3.chr3 156347974 4 + 157873769 Agcc i nomLeu3.chr3 C 0 C 0 s saiBol1.JH378287 1332714 2 - 2905041 Ag-- i saiBol1.JH378287 C 0 C 0 e otoGar3.GL873575 10977942 896 - 12073884 I e aotNan1.NW_018494782v1 1542639 3 - 1813869 I e cebCap1.NW_016107695v1 1297438 3 - 2164891 I e calJac3.chr4 169932161 0 + 171630274 C e dasNov3.JH569188 623529 106 + 760995 I e colAng1.NW_012114488v1 15647430 1556 - 23502949 I e canFam3.chr1 56207878 4 + 122678785 I e chlSab2.chr13 96721968 514 + 98384682 I e cerAty1.NW_012002071v1 1435942 413 + 3144229 I e manLeu1.NW_012106474v1 8257274 4705 - 10857215 M e macNem1.NW_012011000v1 8404379 675 + 10161646 I e rheMac8.chr4 170372897 433 + 172585720 I e macFas5.chr4 169118511 84 - 170955103 I e panPan2.chr6 171834694 539 + 173848474 M a score=57533.000000 s hg38.chr6_KB021644v2_alt 145173 25 + 185823 aggcacagtggctcatgcctgtgat s panTro5.chr6 173601816 25 + 175400573 aggcacagtggctcatgcctgtgat i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11518307 25 - 12463322 aggcacagtggctcatgcctgtgat i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156347978 25 + 157873769 aggcacggtggctcatgcctgtgat i nomLeu3.chr3 C 0 C 0 s calJac3.chr4 169932161 25 + 171630274 Aggcatggtggctcacacctgtgat i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1332716 23 - 2905041 --gcatggtggctcacacctgtgat i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1297441 25 - 2164891 Aggcatggtggctcacacctgtgat i cebCap1.NW_016107695v1 I 3 C 0 s aotNan1.NW_018494782v1 1542642 25 - 1813869 Aggcatggtggctcacacctgtgat i aotNan1.NW_018494782v1 I 3 C 0 e otoGar3.GL873575 10977942 896 - 12073884 I e dasNov3.JH569188 623529 106 + 760995 I e colAng1.NW_012114488v1 15647430 1556 - 23502949 I e canFam3.chr1 56207878 4 + 122678785 I e chlSab2.chr13 96721968 514 + 98384682 I e cerAty1.NW_012002071v1 1435942 413 + 3144229 I e manLeu1.NW_012106474v1 8257274 4705 - 10857215 M e macNem1.NW_012011000v1 8404379 675 + 10161646 I e rheMac8.chr4 170372897 433 + 172585720 I e macFas5.chr4 169118511 84 - 170955103 I e panPan2.chr6 171834694 539 + 173848474 M a score=717297.000000 s hg38.chr6_KB021644v2_alt 145198 267 + 185823 cccagcaccttgggaggctgaggcaggctgggttcagttaagcccaggagttcaagaccaacctaggcaacata--gtgaggccttatctctacaaaatacaaaggaaaattggcc------gaatatggtggtgcaggctgtcgaggctgtggccccagctactcaggagggtgaggtgggaggacggtttgagccccaggaggtggagcccgcagtgagccaggatcacaccactgtactccagcctgggtattagagcaagaccttgtct--------ca s panTro5.chr6 173601841 267 + 175400573 cccagcaccttcggaggctgaggcaggctgggttcagttaagcccaggagttcaagaccaacctaggcaacaga--gtgaggccttatctctacaaaatacaaaggaaaattggcc------gaatatggtggtataggctgtcgaggctgtggccccagctactcaggagggtgaggcgggaggacggtttgagccccaggaggtggagcccacagtgagccaggatcacaccactgtactccagcctgggtattagagcaagaccttgtct--------ca i panTro5.chr6 C 0 C 0 s panPan2.chr6 171835233 267 + 173848474 cccagcaccttcggaggctgaggcaggctgggttcagttaagcccaggagttcaagaccaacctaggcaacaga--gtgaggccttatctctacaaaatacaaaggaaaattggcc------gaatatggtggtgtaggctgtcgaggctgtggccccagctactcaggagggtgaggcgggaggacggtttgagccccaggaggtggagcccgcagtgagccaggatcacaccactgtactccagcctgggtattagagcaagaccttgtct--------ca i panPan2.chr6 M 539 C 0 s gorGor5.CYUI01015032v1 11518332 267 - 12463322 cccagcaccttgggaggctgaggcaggctgggttcagttaagcccaggagttcaagaccaacctaggcaacata--gtgaggccttatctctacaaaatacaaaggaaaattggcc------gaatatggtggtgtaggctgttgaggctgtggccccagctactcagcagggtgaagtgggaggacagtttgagccccaggaggtggagcccacagtgagccaggatcacaccactgtactccagcctgggtattagagcaagaccttgtct--------ca i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156348003 267 + 157873769 cccagcaccttgggagactgaggcaggctgggttcacttaagcccaggagttcaagaccaacctaggcaacata--gtgaggccttatctctacaaaatacaaataaaaattggcc------agatatggtggtgttggctgtcgaggctgtggccccagctactcaggagggtgaggtgggaggacggtttgagccccaggagatggagcctgcagtgagccaggatcgcaccactgtactccagcctgggtagtagagcaagaccttgtct--------ca i nomLeu3.chr3 C 0 C 0 s calJac3.chr4 169932186 267 + 171630274 ctcagcactttgggaggctgaggcagg--aggtgtgcttaagcctaggagttcaaaacccacctgggcaacaca--gcgaagccctatctctacgaaata------aaacttggcc------agatgtggtgttgtcggctttagaggctgtgatctcagctattcaggaggctaaggtgggaggatagcttgagccccaggagatggaggctgcagtgagccaggatcgcaccactgtactccagcctgggtagcagagcaaaaccttgtctcataaacaca i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1332739 264 - 2905041 cccagcactttgagaggctgaggcagg--aggtttgcttaagcctaggagttcaaaacccacccgggcaac-ta--gggaagccctgtctctacaagata------gaacttggccggatatggatatggcggtgtaggctttagaggctgcgatctcagctgttcaggaggctgaggtgggaggacagcttgagccccaggaggtggaggctgcggtgagccaggattgcaccactgtactccagcctggatagcagagcaaaaccttgtct--------ca i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1297466 261 - 2164891 cccagcactttgggaggctgaggcagg--aggtttgcttaagcctaggagttcaaaacccacctgggcaacatagcgcgaagccccatctctacaaaata------aaacttgatc------agatatggtggtgtcggctttagaggctgtgatctcagctattcaggaggctgaggtgggaggacagcttgagccccgggagatggaggctgaggtgagccaggatcacaccactgtactccagcctgggtagcagagcaaaaccttgtct--------ca i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1542667 259 - 1813869 cccagcactttgggaggctgaggcagg--aggtttgcttaagcctaggagttcaaaacccacctgggcaacata--gcgaagccctatctctacaaaata------aaacttggcc------agatatggtggtgtcggctttagatgctatgatctcagctattcaggaggctgaggtgggaggacagcttgagccccacgaggtggaggctgcagtgagccaggatcgcaccactgtactccagcctgggtagcagagcaaaaccttgtct--------ca i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10977942 896 - 12073884 I e dasNov3.JH569188 623529 106 + 760995 I e colAng1.NW_012114488v1 15647430 1556 - 23502949 I e canFam3.chr1 56207878 4 + 122678785 I e chlSab2.chr13 96721968 514 + 98384682 I e cerAty1.NW_012002071v1 1435942 413 + 3144229 I e manLeu1.NW_012106474v1 8257274 4705 - 10857215 M e macNem1.NW_012011000v1 8404379 675 + 10161646 I e rheMac8.chr4 170372897 433 + 172585720 I e macFas5.chr4 169118511 84 - 170955103 I a score=21276.000000 s hg38.chr6_KB021644v2_alt 145465 21 + 185823 gaaataaa-----taaat-------------aataaat-a s panTro5.chr6 173602108 21 + 175400573 gaaataaa-----taaat-------------aataaat-a i panTro5.chr6 C 0 C 0 s panPan2.chr6 171835500 21 + 173848474 gaaataaa-----taaat-------------aataaat-a i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11518599 18 - 12463322 gaaataaa-----taaat-------------aata----a i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156348270 35 + 157873769 Gaaataaa-----taaataaataaataaataaataaataa i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169118595 21 - 170955103 gaaagaaa-----gaaag-------------agaaaga-a i macFas5.chr4 I 84 C 0 s calJac3.chr4 169932453 15 + 171630274 taaataaa-----taaat-------------a-------a i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1333003 15 - 2905041 tacataaa-----taaat-------------a-------a i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1297727 15 - 2164891 taaataaa-----taaat-------------a-------a i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1542926 20 - 1813869 taaaTACATAAATTAAAT-------------A-------A i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10977942 896 - 12073884 I e dasNov3.JH569188 623529 106 + 760995 I e colAng1.NW_012114488v1 15647430 1556 - 23502949 I e canFam3.chr1 56207878 4 + 122678785 I e chlSab2.chr13 96721968 514 + 98384682 I e cerAty1.NW_012002071v1 1435942 413 + 3144229 I e manLeu1.NW_012106474v1 8257274 4705 - 10857215 M e macNem1.NW_012011000v1 8404379 675 + 10161646 I e rheMac8.chr4 170372897 433 + 172585720 I a score=8788.000000 s hg38.chr6_KB021644v2_alt 145486 14 + 185823 ------ataaaTAAAAACTG s panTro5.chr6 173602129 14 + 175400573 ------ataaataaAAACTG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171835521 14 + 173848474 ------ataaaTAAAAACTG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11518617 14 - 12463322 ------ataaataaaaaCTG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156348305 14 + 157873769 ------ataaataaataata i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169118616 14 - 170955103 ------acaaagaaaAACGT i macFas5.chr4 C 0 C 0 s calJac3.chr4 169932468 10 + 171630274 ------GTGAATAATA---- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1333018 10 - 2905041 ------GTGAATAATC---- i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1297742 10 - 2164891 ------GTGAATAATA---- i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1542946 10 - 1813869 ------GTGAATAATA---- i aotNan1.NW_018494782v1 C 0 C 0 s canFam3.chr1 56207882 14 + 122678785 ACAAAAATAAGTCA------ i canFam3.chr1 I 4 C 0 e otoGar3.GL873575 10977942 896 - 12073884 I e dasNov3.JH569188 623529 106 + 760995 I e colAng1.NW_012114488v1 15647430 1556 - 23502949 I e chlSab2.chr13 96721968 514 + 98384682 I e cerAty1.NW_012002071v1 1435942 413 + 3144229 I e manLeu1.NW_012106474v1 8257274 4705 - 10857215 M e macNem1.NW_012011000v1 8404379 675 + 10161646 I e rheMac8.chr4 170372897 433 + 172585720 I a score=5634.000000 s hg38.chr6_KB021644v2_alt 145500 1 + 185823 A s panTro5.chr6 173602143 1 + 175400573 A i panTro5.chr6 C 0 C 0 s panPan2.chr6 171835535 1 + 173848474 A i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11518631 1 - 12463322 A i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156348319 1 + 157873769 a i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169118630 1 - 170955103 G i macFas5.chr4 C 0 C 0 s cerAty1.NW_012002071v1 1436355 1 + 3144229 a i cerAty1.NW_012002071v1 I 413 C 0 s manLeu1.NW_012106474v1 8262072 1 - 10857215 a i manLeu1.NW_012106474v1 M 4705 C 0 s calJac3.chr4 169932478 1 + 171630274 A i calJac3.chr4 C 0 I 1 s saiBol1.JH378287 1333028 1 - 2905041 A i saiBol1.JH378287 C 0 I 1 s cebCap1.NW_016107695v1 1297752 1 - 2164891 A i cebCap1.NW_016107695v1 C 0 I 1 s aotNan1.NW_018494782v1 1542956 1 - 1813869 A i aotNan1.NW_018494782v1 C 0 I 1 s canFam3.chr1 56207896 1 + 122678785 A i canFam3.chr1 C 0 C 0 e otoGar3.GL873575 10977942 896 - 12073884 I e dasNov3.JH569188 623529 106 + 760995 I e colAng1.NW_012114488v1 15647430 1556 - 23502949 I e chlSab2.chr13 96721968 514 + 98384682 I e macNem1.NW_012011000v1 8404379 675 + 10161646 I e rheMac8.chr4 170372897 433 + 172585720 I a score=4095.000000 s hg38.chr6_KB021644v2_alt 145501 1 + 185823 A s panTro5.chr6 173602144 1 + 175400573 A i panTro5.chr6 C 0 C 0 s panPan2.chr6 171835536 1 + 173848474 A i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11518632 1 - 12463322 A i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156348320 1 + 157873769 a i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170373330 1 + 172585720 A i rheMac8.chr4 I 433 C 0 s macFas5.chr4 169118631 1 - 170955103 A i macFas5.chr4 C 0 C 0 s cerAty1.NW_012002071v1 1436356 1 + 3144229 a i cerAty1.NW_012002071v1 C 0 C 0 s manLeu1.NW_012106474v1 8262073 1 - 10857215 A i manLeu1.NW_012106474v1 C 0 C 0 s canFam3.chr1 56207897 1 + 122678785 A i canFam3.chr1 C 0 C 0 e otoGar3.GL873575 10977942 896 - 12073884 I e saiBol1.JH378287 1333029 1 - 2905041 I e aotNan1.NW_018494782v1 1542957 1 - 1813869 I e cebCap1.NW_016107695v1 1297753 1 - 2164891 I e calJac3.chr4 169932479 1 + 171630274 I e dasNov3.JH569188 623529 106 + 760995 I e colAng1.NW_012114488v1 15647430 1556 - 23502949 I e chlSab2.chr13 96721968 514 + 98384682 I e macNem1.NW_012011000v1 8404379 675 + 10161646 I a score=259876.000000 s hg38.chr6_KB021644v2_alt 145502 38 + 185823 GTCCCATCCGACTTTGTT---TTGTAAAGTAGACATTTATC s panTro5.chr6 173602145 38 + 175400573 GTCCCATCTGACTTTGTT---TTGTAAAGTAGACATTTATT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171835537 38 + 173848474 GTCCCATCTGACTTTGTT---TTGTAAAGTAGACATTTATT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11518633 38 - 12463322 GTCCCATCTGACTTTGTT---TTGTAAAGTAGACATTTATC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156348321 38 + 157873769 GTCCCATCTGACTTTGTT---TTGTAAAGTAGACATTTATC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170373331 38 + 172585720 GTCCCATCTGACTTTGTT---TTGTAAAGCAGACATGTATC i rheMac8.chr4 C 0 I 2 s macFas5.chr4 169118632 38 - 170955103 GTCCCATCTGACTTTGTT---TTGTAAAGCAGACACGTATC i macFas5.chr4 C 0 I 2 s cerAty1.NW_012002071v1 1436357 38 + 3144229 gTCCCATCTGACTTTGTT---TTGTGAGAGAGACATGTATC i cerAty1.NW_012002071v1 C 0 I 2 s chlSab2.chr13 96722482 38 + 98384682 GTCCCATCTGACTGTGTT---TTGTAAAGCAGACATGTATC i chlSab2.chr13 I 514 I 2 s manLeu1.NW_012106474v1 8262074 38 - 10857215 GTCCCATCTGACTTTGTT---TTGTGAAGCAGACATGTATC i manLeu1.NW_012106474v1 C 0 I 2 s calJac3.chr4 169932480 31 + 171630274 G-------TGACTTTGTT---TTGTAAATCAGATACGTATC i calJac3.chr4 I 1 C 0 s saiBol1.JH378287 1333030 37 - 2905041 GTCCCATATGACTTTG-T---TTGGAAAGCAGATGTGTATC i saiBol1.JH378287 I 1 C 0 s cebCap1.NW_016107695v1 1297754 37 - 2164891 GTTCCATCTGACTTTG-T---TTGTAAAGCAGATATGTATC i cebCap1.NW_016107695v1 I 1 C 0 s aotNan1.NW_018494782v1 1542958 38 - 1813869 GTCCCGTCTGACTTTGTT---TTGTAAAGCAGATACGTATC i aotNan1.NW_018494782v1 I 1 C 0 s canFam3.chr1 56207898 41 + 122678785 ATACTACCTGCCTTTGTTTTGTTGTAAAATAAAGACGTATA i canFam3.chr1 C 0 C 0 e otoGar3.GL873575 10977942 896 - 12073884 I e dasNov3.JH569188 623529 106 + 760995 I e colAng1.NW_012114488v1 15647430 1556 - 23502949 I e macNem1.NW_012011000v1 8404379 675 + 10161646 I a score=404509.000000 s hg38.chr6_KB021644v2_alt 145540 45 + 185823 TAACCCTTGCTGTGGTTGTTTGAGTTACAGAGCAGCGATGATCCT s panTro5.chr6 173602183 45 + 175400573 TAACCCTTGTTGTGGTTGTTTGAGTTACAGAGCAGCGATGATCCT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171835575 45 + 173848474 TAACCCTTGTTGTGGTTGTTTGAGTTACAGAGCAGCGATGATCCT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11518671 45 - 12463322 TAACCCTTGTTGTGGTTGTTTGAGATACAGAGCAGCGGTGATCCT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156348359 45 + 157873769 TAACCCTTGTTGTGGTTGTTTGAGTTACAGAGCAGCAATGATCCT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170373371 45 + 172585720 TAACCCTTGTTGTGGTTGTTTAAGTTACAGAGCAGCGATGATCCT i rheMac8.chr4 I 2 C 0 s macFas5.chr4 169118672 45 - 170955103 TAACCCTTGTTGTGGTTGTTTAAGTTACAGAGCAGCGATGATCCT i macFas5.chr4 I 2 C 0 s macNem1.NW_012011000v1 8405054 45 + 10161646 TAACCCTTGTTGTGGTTGTTTAAGTTACAGAGCAGCGATGATCCT i macNem1.NW_012011000v1 I 675 C 0 s cerAty1.NW_012002071v1 1436397 45 + 3144229 TAACCCTTGTTGTGGTTTTTTAAGTTACAGAGCAGCGATGATCCT i cerAty1.NW_012002071v1 I 2 C 0 s chlSab2.chr13 96722522 45 + 98384682 TAACCCTTGTTGTGGTTGTTTAAGTTACAGAGCAGCGGTGATCCT i chlSab2.chr13 I 2 C 0 s manLeu1.NW_012106474v1 8262114 45 - 10857215 TAACCCTTGTTGTGGTTTTTTAAGTTACAGAGCAGCGATGATCCT i manLeu1.NW_012106474v1 I 2 C 0 s calJac3.chr4 169932511 41 + 171630274 TAATCCTTGTTGTGG----TTAAGTTACAGAGCAGCAATCATCCT i calJac3.chr4 C 0 I 31 s saiBol1.JH378287 1333067 45 - 2905041 TAATCCTGGTTGTGGTTGTTTAAGTTACAGAGTAGCAATCATCCT i saiBol1.JH378287 C 0 I 6 s cebCap1.NW_016107695v1 1297791 45 - 2164891 TAATCCTTGTTGTGGTTGTTTAAGTTACAGAGCAGCAATCATCCT i cebCap1.NW_016107695v1 C 0 I 267 s aotNan1.NW_018494782v1 1542996 45 - 1813869 TAATCCTTGTTGTGGTTGTTTAAGTTACAGAGCAGTAATCATCTT i aotNan1.NW_018494782v1 C 0 I 1 s canFam3.chr1 56207939 45 + 122678785 TAATCCATATTATGACTACATGAGTCTCAGGGGAGTGATTACTTC i canFam3.chr1 C 0 C 0 e otoGar3.GL873575 10977942 896 - 12073884 I e dasNov3.JH569188 623529 106 + 760995 I e colAng1.NW_012114488v1 15647430 1556 - 23502949 I a score=20.000000 s hg38.chr6_KB021644v2_alt 145585 2 + 185823 -CC s panTro5.chr6 173602228 2 + 175400573 -CC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171835620 2 + 173848474 -CC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11518716 2 - 12463322 -CC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156348404 2 + 157873769 -CC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170373416 2 + 172585720 -CC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169118717 2 - 170955103 -CC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8405099 2 + 10161646 -CC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1436442 2 + 3144229 -CC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96722567 2 + 98384682 -CC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8262159 2 - 10857215 -CC i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169932583 1 + 171630274 -C- i calJac3.chr4 I 31 I 1 s aotNan1.NW_018494782v1 1543042 1 - 1813869 -C- i aotNan1.NW_018494782v1 I 1 I 116 s canFam3.chr1 56207984 2 + 122678785 TC- i canFam3.chr1 C 0 C 0 e otoGar3.GL873575 10977942 896 - 12073884 I e saiBol1.JH378287 1333112 6 - 2905041 I e cebCap1.NW_016107695v1 1297836 267 - 2164891 I e dasNov3.JH569188 623529 106 + 760995 I e colAng1.NW_012114488v1 15647430 1556 - 23502949 I a score=18274.000000 s hg38.chr6_KB021644v2_alt 145587 4 + 185823 CAGG s panTro5.chr6 173602230 4 + 175400573 CAGG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171835622 4 + 173848474 CAGG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11518718 4 - 12463322 CAGG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156348406 4 + 157873769 CAGG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170373418 4 + 172585720 TGGG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169118719 4 - 170955103 TGGG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8405101 4 + 10161646 TGGG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1436444 4 + 3144229 CGGG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96722569 4 + 98384682 CCGG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8262161 4 - 10857215 CAGG i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169932585 4 + 171630274 CGGG i calJac3.chr4 I 1 C 0 s canFam3.chr1 56207986 4 + 122678785 CAAG i canFam3.chr1 C 0 I 219 e otoGar3.GL873575 10977942 896 - 12073884 I e saiBol1.JH378287 1333112 6 - 2905041 I e aotNan1.NW_018494782v1 1543043 116 - 1813869 I e cebCap1.NW_016107695v1 1297836 267 - 2164891 I e dasNov3.JH569188 623529 106 + 760995 I e colAng1.NW_012114488v1 15647430 1556 - 23502949 I a score=48311.000000 s hg38.chr6_KB021644v2_alt 145591 8 + 185823 TGAGGAGC s panTro5.chr6 173602234 8 + 175400573 TGGGGAGC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171835626 8 + 173848474 TGAGGAGC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11518722 8 - 12463322 TGAGGAGT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156348410 8 + 157873769 TGAGGAGC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170373422 8 + 172585720 TGAGGAGC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169118723 8 - 170955103 TGAGGAGC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8405105 8 + 10161646 TGAGGAGC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1436448 8 + 3144229 TGAGAAGC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96722573 8 + 98384682 TGAGGAGC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8262165 8 - 10857215 TGAGAAGC i manLeu1.NW_012106474v1 C 0 I 6152 s calJac3.chr4 169932589 8 + 171630274 TGGGGATT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1333118 8 - 2905041 TGGGGAGC i saiBol1.JH378287 I 6 C 0 e otoGar3.GL873575 10977942 896 - 12073884 I e aotNan1.NW_018494782v1 1543043 116 - 1813869 I e cebCap1.NW_016107695v1 1297836 267 - 2164891 I e dasNov3.JH569188 623529 106 + 760995 I e colAng1.NW_012114488v1 15647430 1556 - 23502949 I e canFam3.chr1 56207990 219 + 122678785 I a score=36611.000000 s hg38.chr6_KB021644v2_alt 145599 19 + 185823 --CGTGTCCTCT--GTCCTCCTA s panTro5.chr6 173602242 19 + 175400573 --CGTGTCCTCT--GTCCTCCTA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171835634 19 + 173848474 --CGTGTCCTCT--GTCCTCCTA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11518730 19 - 12463322 --GGTGTCCTCT--GTCCTCCTA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156348418 19 + 157873769 --GGTGTCCTCT--GTCCTCCTA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170373430 12 + 172585720 --AGG---------GTCCTCCCG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169118731 12 - 170955103 --GGG---------GTCCTCCCG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8405113 12 + 10161646 --GGG---------GTCCTCCCG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1436456 21 + 3144229 --AGGATCCTCTCTGTCCTCCCA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96722581 19 + 98384682 --AGAGTCCTCT--GTCTTCCTG i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169932597 21 + 171630274 GTGGTCCTCTCT--GTCCCCCTG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1333126 20 - 2905041 AGGGTTCCCTCT--G-CCCTCCA i saiBol1.JH378287 C 0 C 0 e otoGar3.GL873575 10977942 896 - 12073884 I e aotNan1.NW_018494782v1 1543043 116 - 1813869 I e cebCap1.NW_016107695v1 1297836 267 - 2164891 I e dasNov3.JH569188 623529 106 + 760995 I e colAng1.NW_012114488v1 15647430 1556 - 23502949 I e canFam3.chr1 56207990 219 + 122678785 I e manLeu1.NW_012106474v1 8262173 6152 - 10857215 I a score=32477.000000 s hg38.chr6_KB021644v2_alt 145618 11 + 185823 GGTGGGAG--------------------------------GCG s panTro5.chr6 173602261 11 + 175400573 GGTGGGAG--------------------------------GCG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171835653 11 + 173848474 GGTGGGAG--------------------------------GCG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11518749 11 - 12463322 GGTGGGAG--------------------------------GCA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156348437 11 + 157873769 GGTGGGAG--------------------------------GCG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170373442 11 + 172585720 GGTGAGGA--------------------------------GCA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169118743 11 - 170955103 GGTGAGGA--------------------------------GCA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8405125 11 + 10161646 GGTGAGGA--------------------------------GCA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1436477 9 + 3144229 GGT--GGG--------------------------------GCG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96722600 11 + 98384682 GGTGAGAA--------------------------------GCG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8268325 11 - 10857215 GGTGGGGA--------------------------------GCG i manLeu1.NW_012106474v1 I 6152 C 0 s calJac3.chr4 169932618 43 + 171630274 GGTGAGGATTGGGGGTCTCCTCTGTCCTTTTGGGGGAAATTTG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1333146 11 - 2905041 GGTGGGGA--------------------------------TTG i saiBol1.JH378287 C 0 C 0 e otoGar3.GL873575 10977942 896 - 12073884 I e aotNan1.NW_018494782v1 1543043 116 - 1813869 I e cebCap1.NW_016107695v1 1297836 267 - 2164891 I e dasNov3.JH569188 623529 106 + 760995 I e colAng1.NW_012114488v1 15647430 1556 - 23502949 I e canFam3.chr1 56207990 219 + 122678785 I a score=206117.000000 s hg38.chr6_KB021644v2_alt 145629 47 + 185823 GGGTC-----------------------------TTCTCTGTCCTCCCACGTGGGGAGCAGGGTCTTCTCTGTCTT s panTro5.chr6 173602272 47 + 175400573 GGGTC-----------------------------TTCTCTGTCCTCCCACATGGGGAGCAGGGTCTTCTCTGTCTT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171835664 47 + 173848474 GGGTC-----------------------------TTCTCTGTCCTCCCACATGGGGAGCAGGGTCTTCTCTGTCTT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11518760 47 - 12463322 GGGTC-----------------------------TTCTCTGTCCTCCCACGTGGGGAGCAGGGTCTTCTCTGTCTT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156348448 47 + 157873769 GGGTC-----------------------------TTCTCTGTCTTCCGGAGTGGGGAGCAGGGTCCTCTCTGTCTT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170373453 76 + 172585720 GAGTCCTCTGTCTTCCTGGGTGAGAATCGGGGTCCTCACTGTCCTCCCGGGTGGGGAGTGGGGTCCTCTCCGGCCT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169118754 14 - 170955103 GAGTC--------------------------------------------------------------CTCTGTCTT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8405136 76 + 10161646 GAGTCCTCTGTCTTCCTGGGTGAGAATCGGGGTCCTCACTGTCCTCCCGGGTGGGGAGCGGTGTCCTCTCCGGCCT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1436486 47 + 3144229 GGATC----------------------------CCTCTCTGTCCTCCGGGTGGTGGAGCGGGGTCT-CTCTGTCGT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96722611 47 + 98384682 GGGTC-----------------------------CTCTCTGACCTGCCGGGTGGGGAGCGGGGTCCTCTCTGTCCT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8268336 47 - 10857215 GGGTC-----------------------------CTCTCTGTCGTCCTGGGTGAGGAGCGGGGTCCTCTCTGTCCT i manLeu1.NW_012106474v1 C 0 T 62 s calJac3.chr4 169932661 47 + 171630274 GGGTC-----------------------------CTCTCTGTCCTCCTGTGTGGGGAGCAGGATCCTTTCTGTTGT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1333157 47 - 2905041 GGGTC-----------------------------CTCTCTGCCCTCCCGGGTGGGGGTTGGGGTCCTCTCTGTCCT i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1298103 47 - 2164891 GGGTC-----------------------------CTTTCTGTCCTCCCAAGTGGGGATTGGGGTCCTCTCCATCCT i cebCap1.NW_016107695v1 I 267 C 0 e otoGar3.GL873575 10977942 896 - 12073884 I e aotNan1.NW_018494782v1 1543043 116 - 1813869 I e dasNov3.JH569188 623529 106 + 760995 I e colAng1.NW_012114488v1 15647430 1556 - 23502949 I e canFam3.chr1 56207990 219 + 122678785 I a score=173764.000000 s hg38.chr6_KB021644v2_alt 145676 42 + 185823 CCCGGGT-GGGGAGC-AGGGTC------------------------------------------------------------TTCTCTGTCCTCCTGGGTGGGG s panTro5.chr6 173602319 100 + 175400573 CCTGGGT-GGGGAGC-GGGATCCTCTGTCCTCCTAGGTGGGGAGCGGGGTCCTCTCTGTCCTCCTGGGTGGGGAGCGGGA--TCCTCTGTCCTCCTGGGTGGGG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171835711 40 + 173848474 CCTGGGT-GGGGAGC-GGGATC--------------------------------------------------------------CTCTGTCCTCCTAGGTGGGG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11518807 43 - 12463322 CCCGGGT-GGGGAGCAGGGGTC------------------------------------------------------------CTCTCTGTCCTCCTGGGTGGGG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156348495 73 + 157873769 CCGGAGT-GGGGAGC-AGGGTC-----------------------------CTCTCTGTCTTCCGGAGTGGGGAGCAGGGTCCTCTCTGCCCCCCCAGGTGGGG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170373529 42 + 172585720 CCCGGGT-GGGGAGC-GGGGTC------------------------------------------------------------CTCTCTGTCCTCCCGGGTGGGG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169118768 42 - 170955103 CCTGGGT-GAGAATC-GGGGTC------------------------------------------------------------CTCACTGTCCTCCCGGGTGGGG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8405212 42 + 10161646 CCCGGGT-GGGGAGC-GGGGTC------------------------------------------------------------CTCTCTGTCCTCCCGGGTGGGG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1436533 37 + 3144229 CC--GGT---GGAGC-AGGGTC------------------------------------------------------------CTCTCTGTCCTCCC-AGTGGGG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96722658 19 + 98384682 GCCGGGT-GGGGAGA-GGGGT----------------------------------------------------------------------------------- i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8268321 42 - 10857215 CCCGGGT-GGGGAGC-GGGGTC------------------------------------------------------------CTCTCTGTCGTCCTGGGTGAGG i manLeu1.NW_012106474v1 T 62 C 0 s calJac3.chr4 169932708 42 + 171630274 CCTGGGT-GGGGAAC-ACGGTC------------------------------------------------------------CTCTCTATCCTCCTGAGTGGGG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1333204 42 - 2905041 CCCGGGT-GGGGGTT-GGGGTC------------------------------------------------------------CTCTCTGTCCTCCCGGGTGGGG i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1298150 43 - 2164891 GCCGGGCAGGGGAGC-AGGGTC------------------------------------------------------------CTCTCTGTCCTCCTGGGTGGGG i cebCap1.NW_016107695v1 C 0 I 106 e otoGar3.GL873575 10977942 896 - 12073884 I e aotNan1.NW_018494782v1 1543043 116 - 1813869 I e dasNov3.JH569188 623529 106 + 760995 I e colAng1.NW_012114488v1 15647430 1556 - 23502949 I e canFam3.chr1 56207990 219 + 122678785 I a score=18269.000000 s hg38.chr6_KB021644v2_alt 145718 6 + 185823 AGCGGG s panTro5.chr6 173602419 6 + 175400573 AGCGGG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171835751 6 + 173848474 AGCGGG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11518850 6 - 12463322 AGTGGG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156348568 6 + 157873769 AGCGGG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170373571 3 + 172585720 AGC--- i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169118810 6 - 170955103 AGCGGG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8405254 6 + 10161646 AGCGGG i macNem1.NW_012011000v1 C 0 T 85 s cerAty1.NW_012002071v1 1436570 6 + 3144229 AGCAAG i cerAty1.NW_012002071v1 C 0 I 2 s manLeu1.NW_012106474v1 8268363 6 - 10857215 AGCGGG i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169932750 6 + 171630274 ACTGGG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1333246 6 - 2905041 GTTGGG i saiBol1.JH378287 C 0 C 0 e otoGar3.GL873575 10977942 896 - 12073884 I e aotNan1.NW_018494782v1 1543043 116 - 1813869 I e cebCap1.NW_016107695v1 1298193 106 - 2164891 I e dasNov3.JH569188 623529 106 + 760995 I e colAng1.NW_012114488v1 15647430 1556 - 23502949 I e canFam3.chr1 56207990 219 + 122678785 I e chlSab2.chr13 96722677 0 + 98384682 C a score=18325.000000 s hg38.chr6_KB021644v2_alt 145724 5 + 185823 ATCCT s panTro5.chr6 173602425 5 + 175400573 ATCCT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171835757 5 + 173848474 ATCCT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11518856 5 - 12463322 ATCCT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156348574 5 + 157873769 ATCCT i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169118816 5 - 170955103 GTCCT i macFas5.chr4 C 0 C 0 s cerAty1.NW_012002071v1 1436578 5 + 3144229 GTCCT i cerAty1.NW_012002071v1 I 2 C 0 s manLeu1.NW_012106474v1 8268369 5 - 10857215 GTCCT i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169932756 5 + 171630274 GTCCT i calJac3.chr4 C 0 I 2 s saiBol1.JH378287 1333252 5 - 2905041 GTCCT i saiBol1.JH378287 C 0 I 2 e otoGar3.GL873575 10977942 896 - 12073884 I e aotNan1.NW_018494782v1 1543043 116 - 1813869 I e cebCap1.NW_016107695v1 1298193 106 - 2164891 I e dasNov3.JH569188 623529 106 + 760995 I e colAng1.NW_012114488v1 15647430 1556 - 23502949 I e canFam3.chr1 56207990 219 + 122678785 I e chlSab2.chr13 96722677 0 + 98384682 C e macNem1.NW_012011000v1 8405260 85 + 10161646 T e rheMac8.chr4 170373574 0 + 172585720 C a score=67190.000000 s hg38.chr6_KB021644v2_alt 145729 27 + 185823 CT--GTCCTCCTGAGTGGGGAGCAGGATC s panTro5.chr6 173602430 27 + 175400573 CT--GTCCTCCTGAGTGGGGAGCGGGATC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171835762 27 + 173848474 CT--GTCCTCCTGAGTGGGGAGCAGGATC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11518861 27 - 12463322 CT--GTCCTCCTGAGTGGGGAGCAGGATC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156348579 27 + 157873769 CT--GTCCTCCTGAGTGGGGAGCAGGATC i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169118821 29 - 170955103 CTCCGGCCTCCCGGGTGGGGAGCGGTGTC i macFas5.chr4 C 0 C 0 s cerAty1.NW_012002071v1 1436583 3 + 3144229 CTC-------------------------- i cerAty1.NW_012002071v1 C 0 C 0 s manLeu1.NW_012106474v1 8268374 29 - 10857215 CTCTGTCCTCCCGGGTGGGGAGCGGGATC i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169932763 27 + 171630274 CC--ATCCTCCCGGGTGGGGATTGGGGTC i calJac3.chr4 I 2 I 223 s saiBol1.JH378287 1333259 27 - 2905041 CT--GCCCTCCCGGGTGGGGATTGGGGTC i saiBol1.JH378287 I 2 I 2 s aotNan1.NW_018494782v1 1543159 27 - 1813869 CT--GTCCCCCTGGGTGGGGATTGGGGGT i aotNan1.NW_018494782v1 I 116 I 3 e otoGar3.GL873575 10977942 896 - 12073884 I e cebCap1.NW_016107695v1 1298193 106 - 2164891 I e dasNov3.JH569188 623529 106 + 760995 I e colAng1.NW_012114488v1 15647430 1556 - 23502949 I e canFam3.chr1 56207990 219 + 122678785 I e chlSab2.chr13 96722677 0 + 98384682 C e macNem1.NW_012011000v1 8405260 85 + 10161646 T e rheMac8.chr4 170373574 0 + 172585720 C a score=13755.000000 s hg38.chr6_KB021644v2_alt 145756 3 + 185823 CTC s panTro5.chr6 173602457 3 + 175400573 CTC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171835789 3 + 173848474 CTC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11518888 3 - 12463322 CTC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156348606 3 + 157873769 CTC i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169118850 3 - 170955103 CTC i macFas5.chr4 C 0 I 2 s manLeu1.NW_012106474v1 8268403 3 - 10857215 CTC i manLeu1.NW_012106474v1 C 0 I 2 s calJac3.chr4 169933013 3 + 171630274 CTC i calJac3.chr4 I 223 C 0 s saiBol1.JH378287 1333288 3 - 2905041 CTC i saiBol1.JH378287 I 2 C 0 s cebCap1.NW_016107695v1 1298299 3 - 2164891 CTC i cebCap1.NW_016107695v1 I 106 C 0 s aotNan1.NW_018494782v1 1543189 3 - 1813869 CTG i aotNan1.NW_018494782v1 I 3 C 0 e otoGar3.GL873575 10977942 896 - 12073884 I e dasNov3.JH569188 623529 106 + 760995 I e colAng1.NW_012114488v1 15647430 1556 - 23502949 I e canFam3.chr1 56207990 219 + 122678785 I e chlSab2.chr13 96722677 0 + 98384682 C e cerAty1.NW_012002071v1 1436586 0 + 3144229 C e macNem1.NW_012011000v1 8405260 85 + 10161646 T e rheMac8.chr4 170373574 0 + 172585720 C a score=275391.000000 s hg38.chr6_KB021644v2_alt 145759 54 + 185823 TGTCCTCCTAGGTGGGGACT-GGGGTCCTCTCTGCCCTCCCAGGT--GGGAA-------------------------------GCGGA s panTro5.chr6 173602460 54 + 175400573 TGTCCTCCTAGGTGGGGAGC-GGGGTCCTCTCTGCCCTCCCAGGT--GGGAA-------------------------------GCGGG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171835792 54 + 173848474 TGTCCTCCTAGGTGGGGAGC-GGGGTCCTCTCTGCCCTCCCAGGT--GAGAA-------------------------------GCGGG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11518891 45 - 12463322 TGTCCTCCTAGGTGGGGAGC-GGGGTCCTCTCTGTCCTCCCGGGT--G---------------------------------------- i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156348609 54 + 157873769 TGTCCTCCTAGGTGGGGAGC-GGGGTCCTCTCTGCCCCCCCGGGT--GGGGA-------------------------------GCGGG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170373574 34 + 172585720 ---------------------GGGGTCCTCTCTGTCCTCCCGGGT--GGGGA-------------------------------GCGGG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169118855 54 - 170955103 CGTCCTCCCGGGTGGGGAGC-GGGGTCCTCTCTGTCCTCCCGGGT--GGGGA-------------------------------GCGGG i macFas5.chr4 I 2 C 0 s macNem1.NW_012011000v1 8405175 54 + 10161646 TGTCCTCCCGGGTGGGGAGC-GGTGTCCTCTCCGGCCTCCCGGGT--GGGGA-------------------------------GCGGG i macNem1.NW_012011000v1 T 85 I 31 s cerAty1.NW_012002071v1 1436586 54 + 3144229 TGTCGTCATGGGTGAGGAGT-GGGTCCTCCTCTGTCTCCCCAGTG--GGGAG-------------------------------GCGGG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96722677 29 + 98384682 --------------------------CCTCTCTGTCCTGCCGGGT--GGGGA-------------------------------GCGGG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8268408 54 - 10857215 TGTCCTCCTGAGTGGGGAGC-GGGGTCCTCTCTGTCCTCCTGGGT--GGGGA-------------------------------GCAGG i manLeu1.NW_012106474v1 I 2 C 0 s calJac3.chr4 169933016 86 + 171630274 TGCCCTCCTGGGTGGGGACT-GGGGTCCCCTCCATCCTCTCGGGTAGGGGAATAGGGTCCTCTCTGTCCTCCTGGGTGGGGA-CTGGG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1333291 85 - 2905041 TGTCCTCCCGGGTGGGGGTT-GGGGTCCTCTCTGTCCTCCCGGGT--GGGGATTGGGGTCCTCTCTGCCCTCCCGGCTGGGGGTTGGG i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1298302 55 - 2164891 TGTCCTCCAGGGTGGGGATTGGGGGTCCTCTCTGTCCTCCCGGGT--GGGGA-------------------------------TTGGG i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1543192 54 - 1813869 CATCTTCCTGGGTGGGAATT-GGGGTCCTCTCTGTCCTCCTGAGT--GGGGA-------------------------------TTGGG i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10977942 896 - 12073884 I e dasNov3.JH569188 623529 106 + 760995 I e colAng1.NW_012114488v1 15647430 1556 - 23502949 I e canFam3.chr1 56207990 219 + 122678785 I a score=157244.000000 s hg38.chr6_KB021644v2_alt 145813 31 + 185823 ATCCTCTCTGTCCTCCCG-GGT-G-------------------------------GGGAGCGGG s panTro5.chr6 173602514 62 + 175400573 ATCCTCTCTGTCCTCCCG-GGT-GGGAATCAGGATCCTCTCTGTCCTCCTGGGTAGGGAGTGGG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171835846 62 + 173848474 ATCCTCTCTGTCCTCCCG-GGT-GGGAAGCAGGATCCTCTCTGTCCTCCTGGGTAGGGAGTGGG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11518936 9 - 12463322 -------------------------------------------------------GGGAGTGGG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156348663 31 + 157873769 GTCCTCTCTATCCTCCCG-GGT-G-------------------------------GGGAGCGGG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170373608 31 + 172585720 GTCCTCTCTGTCCTCCCG-GGT-G-------------------------------GGGAGCGGG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169118909 31 - 170955103 GTCCTCTCTGTCCTCCCG-GGT-G-------------------------------GGGAGCGGG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8405260 31 + 10161646 GTCCTCTCTGTCCTCCCG-GGT-G-------------------------------GGGAGCGGG i macNem1.NW_012011000v1 I 31 C 0 s cerAty1.NW_012002071v1 1436640 32 + 3144229 GTCCTCTCTGTCCTCCCGCGGT-G-------------------------------GGGAGCAGG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96722706 31 + 98384682 GTCCTCTCTGTTCTCCCG-GGT-G-------------------------------GGGAGCGGG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8268462 31 - 10857215 GTCCTCTCTGTCCTCCCG-GGT-G-------------------------------GGGAGCGGG i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169933102 32 + 171630274 GTCCTCTCCATCCTCCCG-GGTTG-------------------------------GGGAGCAGG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1333376 30 - 2905041 GTCCTCTCCATCCTCT---GGCTT-------------------------------TGGAGCAGG i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1298357 31 - 2164891 GTCCTCTCCATCCTCT-G-GGTCG-------------------------------GGGAGCAGG i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1543246 32 - 1813869 GTCCTCTCCATCCCTCCG-GGTCA-------------------------------GGGAGCAGG i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10977942 896 - 12073884 I e dasNov3.JH569188 623529 106 + 760995 I e colAng1.NW_012114488v1 15647430 1556 - 23502949 I e canFam3.chr1 56207990 219 + 122678785 I a score=87096.000000 s hg38.chr6_KB021644v2_alt 145844 9 + 185823 GTCCTC-TCT s panTro5.chr6 173602576 9 + 175400573 GTCCTC-TCT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171835908 9 + 173848474 GTCCTC-TCT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11518945 9 - 12463322 GTCGTC-TCT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156348694 9 + 157873769 GGCCTC-TCT i nomLeu3.chr3 C 0 I 274 s rheMac8.chr4 170373639 9 + 172585720 Gtcctc-tct i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169118940 9 - 170955103 Gtcctc-tct i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8405291 9 + 10161646 GTCCTC-TCT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1436672 10 + 3144229 GTCCTCTTCT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96722737 9 + 98384682 GTCCTC-TCT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8268493 9 - 10857215 GTCCTC-TCT i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169933134 9 + 171630274 GCCCTC-TCT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1333406 9 - 2905041 GTCCTC-TCT i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1298388 9 - 2164891 GTCCTC-TCT i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1543278 9 - 1813869 GTCCTC-TCT i aotNan1.NW_018494782v1 C 0 C 0 s dasNov3.JH569188 623635 9 + 760995 gttctc-tct i dasNov3.JH569188 I 106 C 0 e otoGar3.GL873575 10977942 896 - 12073884 I e colAng1.NW_012114488v1 15647430 1556 - 23502949 I e canFam3.chr1 56207990 219 + 122678785 I a score=104567.000000 s hg38.chr6_KB021644v2_alt 145853 14 + 185823 GCAGCTCTCCCTGT s panTro5.chr6 173602585 14 + 175400573 GCAGCTCTCCCTGT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171835917 14 + 173848474 GCAGCTCTCCCTGT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11518954 14 - 12463322 GCAGCTCTCCCTGT i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170373648 14 + 172585720 gcagctcctcctgt i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169118949 14 - 170955103 gcagctcctcctgt i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8405300 14 + 10161646 GCAGCTCCTCCTGT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1436682 14 + 3144229 GCAGCTCCTCCTGT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96722746 14 + 98384682 GCAGCTCCTCCTGT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8268502 14 - 10857215 GCAGCTCCTCCTGT i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169933143 14 + 171630274 GCAGCTCTCCCCAT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1333415 14 - 2905041 GCAGCTCTCCCCGT i saiBol1.JH378287 C 0 I 243 s cebCap1.NW_016107695v1 1298397 14 - 2164891 GCAGCTCTCCCCAT i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1543287 14 - 1813869 GCGGCTCCCCCCAT i aotNan1.NW_018494782v1 C 0 C 0 s dasNov3.JH569188 623644 10 + 760995 ----ctttttctat i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10977942 896 - 12073884 I e colAng1.NW_012114488v1 15647430 1556 - 23502949 I e canFam3.chr1 56207990 219 + 122678785 I e nomLeu3.chr3 156348703 274 + 157873769 I a score=23159.000000 s hg38.chr6_KB021644v2_alt 145867 20 + 185823 --CTCTGTCTGCCCG------CTCTCCA s panTro5.chr6 173602599 20 + 175400573 --CTCTGTctcctcg------ctctcca i panTro5.chr6 C 0 C 0 s panPan2.chr6 171835931 20 + 173848474 --CTCTGTctcctcg------ctctcca i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11518968 20 - 12463322 --CTCTGTCTCCCCG------CTCGCCA i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170373662 20 + 172585720 --ctctgtctccccc------ctttcct i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169118963 20 - 170955103 --ctctgtctccccc------ctttcct i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8405314 17 + 10161646 --CTCTGTCTCCCCA------CTT---T i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1436696 19 + 3144229 --CTCTGTCTCCTGC------CTTTC-T i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96722760 20 + 98384682 --CTCTGTCTCCCCC------CTTTCCC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8268516 20 - 10857215 --GTCTGTCTCCCCA------CTttcct i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169933157 5 + 171630274 ---------------------CTCCT-- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1333672 24 - 2905041 --CAGGGTCCTCTCTGCAGCTCTCCC-- i saiBol1.JH378287 I 243 I 17 s cebCap1.NW_016107695v1 1298411 16 - 2164891 ----CTGTCCCCCAT------CTCCT-- i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1543301 17 - 1813869 --CTCTGTCTCCCC-------CATCT-- i aotNan1.NW_018494782v1 C 0 C 0 s dasNov3.JH569188 623654 20 + 760995 ttctctctttctTCA------TTCCA-- i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10977942 896 - 12073884 I e colAng1.NW_012114488v1 15647430 1556 - 23502949 I e canFam3.chr1 56207990 219 + 122678785 I e nomLeu3.chr3 156348703 274 + 157873769 I a score=312565.000000 s hg38.chr6_KB021644v2_alt 145887 40 + 185823 ------------------------CCTCTCCTGCTTTCTTGTGC-TCTTCCTCTTCCCTGCTTCT s panTro5.chr6 173602619 40 + 175400573 ------------------------cctctcctgctttcttgtgc-tcttcttcttccctgcttct i panTro5.chr6 C 0 C 0 s panPan2.chr6 171835951 40 + 173848474 ------------------------cctctcctgctttcttgtgc-tcttcttcttccctgcttct i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11518988 40 - 12463322 ------------------------CCtctcctgctttcttgtgc-tcttcctcttccctgcttct i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156348977 40 + 157873769 ------------------------CCTCTCCTGCTTTCTTGTGC-TCTTCCTCTTCCCTGCTTCT i nomLeu3.chr3 I 274 C 0 s rheMac8.chr4 170373682 40 + 172585720 ------------------------cctctcctgctttcacgtgc-tcctcttcttccctgcttct i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169118983 40 - 170955103 ------------------------cctctcctgctttcacgtgc-tcctcttcttccctgcttct i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8405331 40 + 10161646 ------------------------CCTCTCCTGCTTTCACGTGC-tcctcttcttccctgcttct i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1436715 41 + 3144229 ------------------------CCTCTCCTGCTTTCATGTGCTTCCTCCTCTTCCCTGCTTCT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96722780 40 + 98384682 ------------------------CCTCTCCTGCTTTCATATGC-CCCTCTTCTTCCCTGCTTCT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8268536 40 - 10857215 ------------------------cctctcctgctttcatgtgc-tcctcctcttccctgcttct i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169933162 40 + 171630274 ------------------------CCTCTCCTGTGGTCATGCAC-ACCTCCTCTTCCCTGCTTCT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1333713 39 - 2905041 ------------------------CCTCTCCTGTGCTCCTGCAC-GCTTCCTCTT-CCTGCGTCT i saiBol1.JH378287 I 17 C 0 s cebCap1.NW_016107695v1 1298427 40 - 2164891 ------------------------CCTCTCCTGCGTTCATGCAT-GCCTCCTCTTCCCCGCTTCT i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1543318 40 - 1813869 ------------------------CCTCTCCTGCGTTCATGCAC-GCCTCCTCTTCCCTGCTTCT i aotNan1.NW_018494782v1 C 0 C 0 s dasNov3.JH569188 623674 62 + 760995 CACTGACACAAACACACACACACATActtcctcttttctttttc-tctccctctttc--gccttt i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10977942 896 - 12073884 I e colAng1.NW_012114488v1 15647430 1556 - 23502949 I e canFam3.chr1 56207990 219 + 122678785 I a score=632185.000000 s hg38.chr6_KB021644v2_alt 145927 82 + 185823 CTCCTCTTCCTTCTTTTCTTCTCCCTGC-----TTCTCTCTTTGTCTGACTTGCC--C-CTT-CTCAG-GAGTGCATATCCTCACACAAT----CT s panTro5.chr6 173602659 82 + 175400573 ctcctcttccttcttttcttctccctgc-----ctctctcTTTGTCTGACTTGCC--C-CTT-CTCAG-GAGTGCATATCCTCACACAAT----CT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171835991 78 + 173848474 ctcctcttccttcttttcttctccctgc-----ctcTC----TGTCTGACTTGCC--C-CTT-CTCAG-GAGTGCATATCCTCACACAAT----CT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11519028 80 - 12463322 ctcctcttccttcttttcttctCCCTGC-----CTCTCTC--TGTCTGACTTGCC--C-CTT-CTCAG-GAGTGCATTTCCTCACACAAT----CT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156349017 82 + 157873769 CTGCTCTTCCTGCTTTTCTTCTCCCTGC-----CTCTCTCTTTGTCTGACTTGCC--C-CTT-CTCGG-GAGTGCATAGCCTCACACAAT----CT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170373722 82 + 172585720 ctcctcttccttgttttcttctCCCTGC-----CTCACCCTTTGTCTGACTTGCC--C-CTT-CTCAG-GAGTGCATATCCTCACACAAT----CT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169119023 82 - 170955103 ctcctcttccttcttttcttctccctgc-----ctctccCTTTGTCTGACTTGCC--C-CTT-CTCAG-GAGTGCATATCCTCACACAAT----CT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8405371 82 + 10161646 ctcctcttccttcttttcttctCCCTGC-----CTCTCCCTTTGTCTGACTTGCC--C-CTT-CTCAG-GAGTGCATATCCTCACACAAT----CT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1436756 81 + 3144229 CTCCGCTTCCTTCTTTTCTTCT-CCTGC-----CTCT-CCTGTGTCTGACTTGCC--C-CTTACTCAG-GAGTGCCTATCCTCACACAAT----CT i cerAty1.NW_012002071v1 C 0 I 1634 s chlSab2.chr13 96722820 82 + 98384682 CTCCTCTTCCTTCTTTCCTTCTCCCTGC-----CTCTCCCTTTGTCTGACTTGCC--C-CTT-CTCAG-GAGTGCATATCCTCACACAAT----CT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8268576 82 - 10857215 ctcctcttacttcttttcttctCCCTGC-----CTCTCCCTTTGTCTGACTTGCC--C-CTT-CTCAG-GAGTGCGTATCCTCACACAAT----CT i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169933202 86 + 171630274 CTCCCCTTCCTTCTTTCCGTCTCCCTGCACTAGCT---TCTCTCTCTGACTTGCC--C-TTT-CTCAG-GAGAGCATATCCT--CACCATTAAACT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1333752 84 - 2905041 CCCCCCTTCCCTCTTTTGGTC-CCCTGC-CTGCCTCTCTCTTTCTCTGACTTGCC--C-CTT-CTCAG-GAGAG-ATATCCTCACACCAT----CT i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1298467 86 - 2164891 CCCTCCCTCCTTCCTTCTGTCTCCCTGC-CGGCCTCTCTCTTTCTCTGACTTGCC--C-CTT-CTCAG-GAGAGCATATCCTCACACTAC----CT i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1543358 86 - 1813869 CTCTACTTCCTTCTTTTCATCTCCCTGC-CTGCCTCTCTCTTTCTCTGACTTGCC--G-CTT-CTCAG-GAGAGCATATCCTCACACTGT----CT i aotNan1.NW_018494782v1 C 0 C 0 s canFam3.chr1 56208209 71 + 122678785 CTCCTTCTCCCTCTCACCTCCCTCTTGC------------------TAATATGTT--CACAT-CACAGAAAATGCACATCCTCACAATAT----CT i canFam3.chr1 I 219 C 0 s dasNov3.JH569188 623736 83 + 760995 gttttctccccttcctgcttcctcct-c-----ttgtccctttTACTTATTTGTTTAC-ATC-TTAAA-AAGTGCATATCCTCAGAATTT----CT i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10977942 896 - 12073884 I e colAng1.NW_012114488v1 15647430 1556 - 23502949 I a score=711145.000000 s hg38.chr6_KB021644v2_alt 146009 95 + 185823 CCACCACAAGCATG---TTCTGGTATTTCAGAATTTTTTTTTTTAGCCAAATCTTCAAAATTCCGTAAACTTTGGTTTCCTTGAGTC-AAAAATGTAGA s panTro5.chr6 173602741 95 + 175400573 CCACCACAAGCATG---TTCTGGTATTTCAGAATTTTTTTTTTTAGCCAAATCTTCAAAATTCCGTAAACTTTGGTTTCCTTGAGTC-AAAAATGTAGA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171836069 93 + 173848474 CCACCAGAAGCATG---TTCTGGTATTTCAGAA--TTTTTTTTTAGCCAAATCTTCAAAATTCCGTAAACTTTGGTTTCCTTGAGTC-AAAAATGTAGA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11519108 95 - 12463322 CCACCACAAGCATG---TTCTGGTATTTCAGAATTATTTTTTTTAGCCAAATCTTCAAAATTCCGTAAACTTTGGTTTCCTTGAGTC-AAAAATGTAGA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156349099 94 + 157873769 CCACCACAAGCACG---TTCTGCTATTTCAGAA-TTTTTTTTTTAGCCAAATCTTCAAAGTTCCGTAAACTTTGGTTTCCTTGAGTC-AAATATGTAGA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170373804 93 + 172585720 CCACCACAAGCATG---TTCTGCCATTTCAGAA--TTTTTTTTTAGCCAAATCTTCAAAATTCCATAAACTTTGGTTTCCTTGAGTC-AAAAATGTAGA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169119105 95 - 170955103 CCACCACAAGCATG---TTGTGCCATTTCAGAATTTTTTTTTTTAGCCAAATCTTCAAAATTCCATAAACTTTGGTTTCCTTGAGTC-AAAAATGTAGA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8405453 95 + 10161646 CCACCACAAGCATG---TTGTGCCATTTCAGAATTTTTTTTTTTAGCCAAATCTTCAAAATTCCATAAACTTTGGTTTCCTTGAGTC-AAAAATGTAGA i macNem1.NW_012011000v1 C 0 C 0 s chlSab2.chr13 96722902 95 + 98384682 CCACCACAAGCATG---TTCTGCCATTTCAGAACTTTTTTTTTTAGCCAAATCTTCAAAATTCCATAAACTTTGGTTTCCTTGAGTC-AAAAATGTAGA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8268658 92 - 10857215 CCACCACAAGCATG---TTCTGCCATTTCAGAAA---TTTTTTTAGCCAAATCTTCAAAATTCCATAAACTTTGGTTTCCTTGAGAC-AAAAATGTAGA i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169933288 96 + 171630274 TCACCACAAGCACGTTCTTCTGCTATTTCAG-A-TTTTTTTTTTAGCCAAATCTTCAAAATTCTGTAACCTTTGGTTTCCTTGGGTC-AACAGTGTAGG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1333836 94 - 2905041 TCACCACAAGCATG---TTCTGCTCTTTCAGAA-TTGTTTTTTAAGCCAAATCTTCAAAATTCTGTCAGCTTTGGTTTCCTAGGGTC-AGCAGCGTAGG i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1298553 93 - 2164891 TCACCAC-AGCTTG---TTCTACTATTTCAGAA-TTGTTTTTTTAGCCAAATCTTCAAAATTCTGTAACCTTTGGTTTCCTTGGGTC-AGCAGTGTAGA i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1543444 95 - 1813869 TCACCACAAGCATG---TTCTTCTATTTCAGAATTTTTTTTTTTAGCCAAATCTTCAAAATTCTGTAAGCTTTGGTTTCCTTGGGTC-ATCAGTGTAGG i aotNan1.NW_018494782v1 C 0 C 0 s canFam3.chr1 56208280 95 + 122678785 TTACCTAAAGTATG---ATCTCCTAATTCAGAACTGGCTGCTGTAGCCAAACTCTTAAAATCCTGCGAGCTTTCGTTTCTTCAGCTC-AAAAATACGGC i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 623819 94 + 760995 TGACTCAATGTACG---TTCTACTTATCCATAA--TTGGTTCCTAGCTAAGTCTTTAAAATTCTGCCAGTTGTAATTTCCGTACCTCAAAAAATGTAGA i dasNov3.JH569188 C 0 I 4 e otoGar3.GL873575 10977942 896 - 12073884 I e colAng1.NW_012114488v1 15647430 1556 - 23502949 I e cerAty1.NW_012002071v1 1436837 1634 + 3144229 I a score=30556.000000 s hg38.chr6_KB021644v2_alt 146104 5 + 185823 ACATT s panTro5.chr6 173602836 5 + 175400573 AGATT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171836162 5 + 173848474 AGATT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11519203 5 - 12463322 AGATT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156349193 5 + 157873769 AGATT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170373897 5 + 172585720 AGCTT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169119200 5 - 170955103 AGCTT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8405548 5 + 10161646 AGCTT i macNem1.NW_012011000v1 C 0 C 0 s chlSab2.chr13 96722997 5 + 98384682 AGATT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8268750 5 - 10857215 AGATT i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169933384 5 + 171630274 AGATT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1333930 5 - 2905041 CGGTT i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1298646 5 - 2164891 AGATC i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1543539 5 - 1813869 AGATT i aotNan1.NW_018494782v1 C 0 C 0 s canFam3.chr1 56208375 5 + 122678785 AGACT i canFam3.chr1 C 0 I 313 e otoGar3.GL873575 10977942 896 - 12073884 I e dasNov3.JH569188 623913 4 + 760995 I e colAng1.NW_012114488v1 15647430 1556 - 23502949 I e cerAty1.NW_012002071v1 1436837 1634 + 3144229 I a score=1164452.000000 s hg38.chr6_KB021644v2_alt 146109 186 + 185823 CTAATACTCGTtgtga----tagtactgagtgccaacttgactggattgaagggcacaaagtattgtcctggctgtgtccatgagggtgttgccaaaggagattaccatttgagtcagtgggctgggagaggcaggcccaccctcaatgtgggtggccaccatctaatcagccgccggcttggctaggat s panTro5.chr6 173602841 186 + 175400573 CTAATACTCGTtgtga----tagtactgagtgccaacttgactggattgaaggacacaaagtattgtcctggctgtgtccatgagggtgttgccaaaggagattaccatttgagtcagtgggctgggaaaggcaggcccaccctcaatgtgggtggccaccatctaatcagccgcctgcttggctaggat i panTro5.chr6 C 0 C 0 s panPan2.chr6 171836167 186 + 173848474 CTAATACTCGTtgtga----tagtactgagtgccaacttgactggattgaaggacacaaagtattgtcctggctgtgtccatgagggtgttgccaaaggagattaccatttgagtcagtgggctgggaaaggcaggcccaccctcaatgtgggtggccaccatctaatcagccgccggcttggctaggat i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11519208 185 - 12463322 CTAATACTCGTtgtga----tagtactgagtgccaacttgactggattgaagga-acaaagtattgtcctggctgtgtccatgagggtgttgccaaaggagattaccatttgagtcagtgggctgggagaggcagacccaccctcagtctggatggccaccatctaatcagctgccggcttggctaggat i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156349198 190 + 157873769 CTAAAACTCGTtgtgatagttagtactgagtgccaacttgactggattgcaggacacagagtattgtcctggctgtgtccatgagggtgttgccaaaggagattaccatttgagtcagtgggctgggagaggcagacccaccctcagtctgggtggccaccatctaatcagctgccagcttggctaggat i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170373902 189 + 172585720 CTAATACTCATtgtgataattagtactgagtgccaacttgactggaatcaaggacacaaagtgttg-cctggctgtgtccgtgagggtgttgccagaggagattaatacttgagtcagtgggctgggagaggcagacccaccctcagtctgggtggccaccatctaatcagctgctggcttggctaggat i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169119205 189 - 170955103 CTAATACTCATtgtgataattagtactgagtgccaacttgactggattgaaggacacaaagtgttg-cctggctgtgtccgtgagggtgttgccagaggagattaatacttgagtcagtgggctgggagaggcagacccaccctcagtctgggtggccaccatctaatcagctgctggcttggctaggat i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8405553 189 + 10161646 CTAATACTCATtgtgataattagtactgagtgccaacttgactggattgaaggacacaaagtgttg-cctggctgtgtccgtgagggtgttgccagaggagattaatacttgagtcagtgggctgggagaggcagacccaccctcagtctgggtggccaccatctaatcagctgctggcttggctaggat i macNem1.NW_012011000v1 C 0 C 0 s chlSab2.chr13 96723002 181 + 98384682 CTAATACTCATtgtgataattagtactgagtgccaactagactggattggaggacacaaagtgttgtcctggctgtgtctgtgagggtgttgccagaagagattaatacttgagtcagtgggctgggagag---------ctctcagtctgggtgggcaccagctaatcagctgctggcttggctaggat i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8268755 190 - 10857215 CTAATACTCATtgtgataattagtactgagtgccaacttgactggattggaggacacaaagtgttgtcctggctgtgtccgtgagggtgttgccagaggagattaatacttgagtcagtgggctgggagaggcagacccactctcagtctgggtgggcaccagctaatcagctgctggcttggctaggat i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169933389 182 + 171630274 GGACTACTCCTCttga-------tagtgagtgtcaacttggctggattgaaggatacactgtatcgacc-tggtgtgtctgtcagggggttgctggaggagattcacatttgagtcagtgggctgggaaaggcaggcccacccgcagtctaggtgggcaccatctaatcagctgccagcacgactggcag i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1333935 183 - 2905041 CTGCTCCTCACTGtga-------tagcgagtgtcagcttggctggactgaagggtgcacagtgtcgaccgtgctgtgtctgtgagggtgttgctggaggagggtcacatctgagtcggtgggctgggaaaggcaggcccacctgcaatctaggtgggcaccatctaatcagctgccagcgagactggcag i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1298651 183 - 2164891 CTGCTACTCGCtgtga-------tagtgagtgtccgcttggctggactgaaggatgcacagtatcggccctggtgtgtctgtgagggtgttactggaggaggttaacatctgagtcagtgggctgggaaaggcaggcccacccgcaatctaggtgggcaccatctaatcagctgccagcacgactggcag i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1543544 183 - 1813869 CTGCTTCTCACtgtga-------tggtgagtgtcagcttggctgcattgaaagacacacggtatggaccctggtgcgtctgtgagggtgctgctggaggagattcacatttgagtcagtgggctgggaaagacaggcccacccgcgatctaggtgggcaccatctaatcagctgtccctgtggctagaat i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10977942 896 - 12073884 I e dasNov3.JH569188 623913 4 + 760995 I e colAng1.NW_012114488v1 15647430 1556 - 23502949 I e canFam3.chr1 56208380 313 + 122678785 I e cerAty1.NW_012002071v1 1436837 1634 + 3144229 I a score=2836802.000000 s hg38.chr6_KB021644v2_alt 146295 371 + 185823 ----aaaagcaggcagaggaacgtggaaggactggactggctgagtcttcctgcctccatctttctcccgtgctggatgcttcctgccctcgaacatcagact-ccaagttcttcagcttttggactcttggaccttggactt-acactagtggtttgccaggggctctcgtgccttcggccacagactgaaggctgcactgtcggtttccctacttttgagg-tttgggacttggactggcttccttgctcctcagcttgcagatggtctattgtgggacttcaccttctgattgtgtgagttaattctcctaataaactccctttcatgtatacatctatccta------ctagtcctctagagaaccctcactaatacaCT s panTro5.chr6 173603027 371 + 175400573 ----aaaagcaggcagaggaacgtggaaggactggactggctgagtcttccacgttccatctttctcccgtgctggatgcttcctgcccttgaacatcagact-ccaagttcttcagcttttggactcttggaccttggactt-acactagtggtttgccaggggctctcgggccttcggccacagaccgaaggctgcactgtcggcttccctacttttgagg-tttgggactcggactggcttccttgctcctcagcttgcagatggtctactgtgggacttcaccttgtgattgtgtgagttaattctcctaataaactccctttcatgtatacatctatccta------ctagtcctctagagaaccctcactaatacaCT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171836353 371 + 173848474 ----aaaagcaggcagaggaacgtggaaggactggactggctgagtcttcctgcctccatctttctcccgtgctggatgcttcctgcccttgaacatcagact-ccaagttcttcagcttttggactcttggaccttggactt-acactagtggtttgccaggggctctcaggccttcggccacagaccaaaggctgcactgtcggcttccctacttttgagg-tttgggactcggactggcttccttgctcctcagcttgcagatggtctactgtgggacttcaccttgtgattgtgtgagttaattctcctaataaactccctttcatgtatacatctatccta------ctagtcctctagagaaccctcactaatacaCT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11519393 368 - 12463322 ----aaaagcaggcagaggaacgtggaaggactggactggctgagtcttcctgcctccatctttctcccgtgctggatgcttcctgccctcgaacatcagact-ccaagttcttcagcttctggactcttggaccttggactt-acac---tggtttgccgggggctctcgggccttcggccacagactgaaggctgcactgtcggcttgcctacttttgagg-tttgggacttggattggcttccttgctcctcagcttgcagatggtctattgtgggacttcaccttgtgattgtgtgagttaattctcctaataaactccctttcatgtatacatctatccta------ctagtcctctagaggacgctcactaatacaCT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156349388 368 + 157873769 ----aaaagcaggcagaggaacatggaaggactggactagctgagtctccctacctccatctttgtcccgtgctggatgcttcctgccctcggacctcagact-ccaagttcttcagcttttggactcttggaccttgcacttaacactagtggtttgccaggagctctcgggccttcagccacacactgaaggctacactgtcagcttccctacttttgagg-tttgggactcggactggctccgttgcttctcagcttgcagacggcctattgtgggacttcaccttgtgattgtgtgag----ttctgctaataaactccctttcatgtatacatctatccta------ctagtcctctagagaaccctcactaatataCT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170374091 370 + 172585720 ----aaaagcaggcagaggaacatggaaaga--ggactggctgagtcttcctgcctctatttttctcccatgctggctgcttcctgccctcaaacatcagact-ccaagttcttcagcttttggacccttggacctcggactt-acaccagtggtttgccaggggctctcgggcctttggccacagaccaaaggctgcactgtcagcttccctacttttgaggttttgggacttggtttggctcccttgctcctcagcttgcagacggcctattatgggacttcaccttgtgatggtgtgagtgaattctcctaataaactccctttcatgtatacatctctccta------ctagtcctctagagaaccctgactaatgcaCT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169119394 370 - 170955103 ----aaaagcaggcagaggaacatggaaaga--ggactggctgagtcttcctgcctctatttttctcccatgctggctgcttcctgccctcaaacatcagact-ccaagttcttcagcttttggacccttggacctcggactt-acaccagtggtttgccaggggctctcgggcctttggccacagacgaaaggctgcactgtcagcttccctacttttgaggttttgggacttggtttggctcccttgctcctcagtttgcagacggcctattatgggacttcaccttgtgatggtgtgagtgaattctcctaataaactccctttcatgtatacatctctccta------ctagtcctctagagaaccctgactaatgcaCT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8405742 370 + 10161646 ----aaaagcaggcagaggaacatggaaaga--ggactggctgagtcttcctgcctctatttttctcccatgctggctgcttcctgccctcaaacatcagact-ccaagttcttcagcttttggacccttggacctcggactt-acaccagtggtttgccaggggctctcgggcctttggccacagaccaaaggctgcactgtcagcttccctacttttgaggttttgggacttggtttggctcccttgctcctcagcttgcagacggcctattatgggacttcaccttgtgatggtgtgagtgaattctcctaataaactccctttcatgtatacatctctccta------ctagtcctctagagaaccctgactaatgcaCT i macNem1.NW_012011000v1 C 0 C 0 s chlSab2.chr13 96723183 370 + 98384682 ----aaaagcaggcagaggaacatggaaaga--cgactggctgagtcttcctgcctccatttttctcccatgctggctgcttcctgccctcaaacatcagact-ccaagttcttcagtttttggacccttggacctcggactt-acactagtggtttgccaggggctctccggcctttggccacagactgaaggctgcactgtcagcttccctgcttttgaggttttgggacttggttcggttcccttgctcctcagcttgcagacggcctattatgggacttcaccttgtgatggtgtgagtcaattctcctaataaactccctttcatgtatacatctctccta------ctagtcctctagagaaccctgactaatgcaCT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8268945 370 - 10857215 ----aaaagcaggcagaggaacatggaaaga--ggactggctgaatcttcctgcctccatctttctcccgtgctggatgcttcctgccctcaaacatcagact-ccaagttcttcagcttttggactcttggacctgggactt-acactagtgatttgccaggggctctccggcctttggccacagactgaaggctgcactgtcagcttccctgcttttgaggttttgggacttggttcggctcccttgctcctcagcttgcagacggcctattatgggacttcaccttgtgatggtgtgagtgaattctcctaataaactccctttcatgtatacatctctccta------ctagtcctctagagaaccctgactaatgcaCT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15648986 371 - 23502949 ----aaaagcagacagaggaacatggaaaga--cgactgtctgagtcttcctgcctccatctttctcccgtgctggctgcttcctgccctcgaacatcagactcccaagttcttcagcttttggactcctgaatctcggactt-acactagtggtttgccaggggctctcgggcctttggccacagactgaaggctgcactgtcaggttccctgcttttgaggttttgggacttagctcggctcccttgctcctcggcctgcagacggcctattgtgggacttcaccttgtgatggtgtgagtcaattctcctaataaactccctttcatgtatacagctatccta------ctagtcctctagagaaccctgactaatacaCT i colAng1.NW_012114488v1 I 1556 C 0 s calJac3.chr4 169933571 371 + 171630274 aggataaagctggcagaggaacgtggaaggacgggactggccgagtctcccggcctccatctttcttccgtgctggatgct--ctgcacccgaacaccagact-ccaggttcttcggcttctggcctctgggacct-----tt-acca---tggcttgccaggggctctcgggccttcggcggcagactgcaggctgcactgtcggcttccccacctgtggggtttggggactgggtctggcttccttgctcctcagctcgcagacagcctgctgtggggcttccccttgtgatggtgtgagtcagtgctcctaataaactccc-tccacatattcatctatcctgtgggtcctgtccctctagagaactctgactcatacaCT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1334118 372 - 2905041 agcataaagctgacagaggaacgtggaaggacgggactggctgagtcttccagcct-catgtttctcccgtgctgggtgcttcctccaccagaacaccagact-ccaagttctttggcttctggactcttggacct-----tc-accc---tggcttgccaggggctctcgggcctttggccacagactgaaggctgcactgccggcttccccagctgagaggtgttgggactggggctggcttccttgctcttcagctcgcagacggcctgttgtggggcttccccttgtgatggtgtgagtcagtgctcctaataaactccc-tccatatattcttctatcctaagggtcctgtccctctagagaactctgactcatacaCT i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1298834 368 - 2164891 agaataaagctggcagaggaacgtggaaggatgggactggctgagtcatccggcct-catctttctcctgtgctggatgcttcctgcacccaaacgccagact-ccaagttcttcggcttctggactcttggactt-----tc-accc---tg----gccaggggctctcgggcctttggccacagactgaaggctgcactatcggcttccccacctgagaggtttttgggctggggctggcttccttgttcttcagctcgcagacagcctgttgtggggcttccccttgtgatggtgtgagtcaatgctcctaataaactccc-tccatatattcatctatcctaagggtcctgtccctctggagaactctgactcatacaCT i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1543727 368 - 1813869 a----aaagcaggcagaggaacgtggaaggacgggactggctgagtcatccagcct-catgtttctcccgtgctggatgcttcctgcacccgaacaccagact-ccaagttcttcggcttctggactcttggacct-----tc-acca---cggcttgccaggggctctcgggcctttggccacagactgaaggctgcactgtccacttccccacctgagaggttttgggactggggctggcttccttgctcttcagctcacagacggcctgttgtggggcttccccttgtgatggtgtgagtcagtgctcctaataaactccc-tccatctattcatctatcctgtgggtcctgtccctctagagagctctgactcatacaCT i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10977942 896 - 12073884 I e dasNov3.JH569188 623913 4 + 760995 I e canFam3.chr1 56208380 313 + 122678785 I e cerAty1.NW_012002071v1 1436837 1634 + 3144229 I a score=2297803.000000 s hg38.chr6_KB021644v2_alt 146666 289 + 185823 C-ACCTTGGCGAGTTATTGAGAGAATTAAGTCAAATAACAGAATCAAAAGACTGACTCATGTCAGGAGCT-GAAAGATCCAGTTCCTTCTCTCATTCACGCTCAGATTCCCTCATCTCCTGCAGCACCAAAGGCATGGGCGGCTC---CCCTGTAGCACACAGGTAAATTGCAATTACGTGATCTCACACTGCCCACTGAATCCGGCAAAGGCTTAAACTTAGAACCCACTTTTT----------CTGT----CTTCATTGCCCGCTGCCATGT-----------------------------------ACGTCC------CTCTAGGACA----------CTTCATTTCAG-----------------CTTACAT--- s panTro5.chr6 173603398 289 + 175400573 C-ACCTTGGCGAGTTATTGAGAGAATTAAGTCAAATAACAGAATCAAAAGACTGACTCATGTCAGGAGCT-GAAAGATCCAGTTCCTTCTCTCATTCACGCTCAGATTCCCTCATCTCCTGCAGCACCAAAGGCGTGGGCGGCTC---CCCTGTAGCACACAGGTAAATTGCAATTACATGATCTCACACTGCCCACTGAATCCGGCAAAGGCTTAAACTTAGAACCCACTTTTT----------CTGT----CTTCACTGCCCCCTGCCATGT-----------------------------------ACGTCC------CTCTAGGACA----------CTTCATTTCAG-----------------CTTACAT--- i panTro5.chr6 C 0 C 0 s panPan2.chr6 171836724 289 + 173848474 C-ACCTTGGCGAGTTATTGAGAGAATTAAGTCAAATAACAGAATCAAAAGACTGACTCATGTCAGGAGCT-GAAAGATCCAGTTCCTTCTCTCATTCACGCTCAGATTCCCTCATCTCCTGCAGCACCAAAGGCGTGGGCGGCTC---CCCTGTAGCACACAGGTAAATTGCAATTACATGATCTCACACTGCCCACTGAATCCGGCAAAGGCTTAAACTTAGAACCCACTTTTT----------CTGT----CTTCACTGCCCCCTGCCATGT-----------------------------------ACGTCC------CTCTAGGACA----------CTTCATTTCAG-----------------CTTACAT--- i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11519761 289 - 12463322 C-ACCTTGGCGAGTTATTGAGAGAATTAAGTCAAATAACAGAACCAAAAGACTGACTCATGTTAGGAGCT-GAAAGATCCAGTTCCTTCTCTCATTCACGCTCAGATTCCCTCATCTCCTGCAGCACCAAAGGCGTGGGCGGCTC---CCCTGTAGCACACAGGTAAATTGCAATTACATGATCTCACACTGCCCACTGAATCCGGCAAAGGCTTAAACTTAGAACCAACTTTTT----------CTGT----CTTCACTGCCCCCTGCCATGT-----------------------------------ACGTCC------CTCTGGGACA----------CTTCATTTCAG-----------------CTTACAT--- i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156349756 290 + 157873769 C-ACCTTGGCAAGTTATTGAGAGAGTTAAGTCAAATAACAGAATCAAAAGACTGACTCATGTCAGGAGCT-GAGAGATCCAGTTCCTTCTCTGATTCATGCTCAGATTCCCTCATCTCCTGCAGCACCAAAGGCGTGGGCAGCTC--TCCCTGTGGCACACAGGTAAATTACAATTACATGATCTCACACTGCCCACTGAATCTGGCAGAGGCTTAAACGTATAACCCACTTTTT----------CTGT----CTTCACTGCCCCCTGCCATGT-----------------------------------ACATCC------CTCTAGGACA----------CTTCATTTCAG-----------------CTTACAT--- i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170374461 291 + 172585720 CAACCTTGGCGAGTTATCGAGAGAAttaagtcaaataacagaatcaaaagactgactcatgtcaggagct-gagaaatccagttccttctctcattcatgctcagattccctcATCTCCTGCAGCACCAAAGGCATGGCGGGCTC--ACCCTGTAGCACACAGGTAAATTACAATTACATGATCTTATGCTGCCCACTGAATCTGGCAAAGGCTTAAACTTATACCCCACTTTTT----------CTGT----CTTCACTGCCCCCTCCCATGT-----------------------------------ATATCC------CTCTATGACA----------CTTCATTTCTG-----------------CTTACAT--- i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169119764 291 - 170955103 CAACCTTGGCGAGTTATCGAGAGAATTAAGTCAAATAACAGAATCAAAAGACTGACTCATGTCAGGAGCT-GAGAAATCCAGTTCCTTCTCTCATTCATGCTCAGATTCCCTCATCTCCTGCAGCACCAAAGGCATGGCGGGCTC--ACCCTGTAGCACACAGGTAAATTACAATTACATGATCTTATGCTGCCCACTGAATCTGGCAAAGGCTTAAACTTATACCCCACTTTTT----------CTGT----CTTCACTGCCCCCTCCCATGT-----------------------------------ATATCC------CTCTATGACA----------CTTCATTTCTG-----------------CTTACAT--- i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8406112 291 + 10161646 CAACCTTGGCGAGTTATCGAGAGAAttaagtcaaataacagaatcaaaagactgactcatgtcaggagct-gagaaatccagttccttctctcattcatgctcagattccctcATCTCCTGCAGCACCAAAGGCATGGCGGGCTC--ACCCTGTAGCACACAGGTAAATTACAATTACATGATCTTATGCTGCCCACTGAATCTGGCAAAGGCTTAAACTTATACCCCACCTTTT----------CTGT----CTTCACTGCCCCCTCCCATGT-----------------------------------ATATCC------CTCTATGACA----------CTTCATTTCTG-----------------CTTACAT--- i macNem1.NW_012011000v1 C 0 C 0 s chlSab2.chr13 96723553 291 + 98384682 CAACCTTGGCGAGTTATCGAGAGAATTAAGTCAAAGAACAGAATCAAAAGACTGACTCAAGTCAGGAGCT-GAGAGATCCAGTTCCTTCTCTCATTCATGCTCAGATTCCCTCATCTCCTGCAGCACCAAAGGCATGGCGGGCTC--ACCCTGTAGCACACAGGTAAATTACAATTACATGATCTCATGCTGCCCACTGAATCTGCCAAAGGCTTAAACTTATACCCCACTTTTT----------CTGT----CTTCACTGCCCCGTCCCATGT-----------------------------------ATATCC------CTCTATGACA----------CTTCATTTCCG-----------------CTTACAT--- i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8269315 291 - 10857215 CAACCTTGGCGAGTTATCGAGATAAttaagtcaaataacagaatcaaaagactgactcatgtcaggagct-gagagatccagttccttctctcattcatgctcagattccctcATCTCCTGCAGCACCAAAGGCATGGCGGGCTC--ACCCTGTAGCACACAGGTAAATTACAATTACATAATCTCATGCTGCCCACTGAATCTAGCAAAGGCTTAAACTTATACCCCACTTTTT----------CTGT----CTTCACTGCCCCCTCCCATGT-----------------------------------ATATCC------CTCTATGAGA----------CTTCATTTCCG-----------------CTTACAT--- i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15649357 295 - 23502949 CAACCTTGGCGAGTTATTGAGAGAAttaagtcaaataacagaatcaaaagactgactcatgtcaggagct-gagggatccagtttcttctttcattcatgctcagattctctcATCTCCTGCAGCACCAAAGGTATGACAGGCTC--ACCCTGTAGCACACAGGTAAATTACAATTACATGATCTCATGCTGCCCACTGAATCTGGCAAAGACTTAAACTTATACCCCACTTTTT----------CTGTCTTCCTTCACTGCCCCCTGCCATGC-----------------------------------ATATCC------GTCTATGACA----------CTTCATTTCCG-----------------CTTACAT--- i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169933942 289 + 171630274 C-GCCTTGGGAAGTTATTGAGAGAATTAAGTCAAATAACAGAATCGAAAGACCGACTCATGTCAGGAACT-GGGAGATCCAGTTGCTTCTCTCCTTCATGCTTCGGTT-CCTTGTCTCCTGCAGCACCAAAGGCATCGCAGGCTC--ACCCTGTAGCACTCAGGTAAACCACAGTCCCACCGTCTCACACTGCCTGCTGGATATGTCACAGGCTTAAAGTTATCACCCACTTTTT----------CTGT----CTTCACTGCCCTCTCCCGTGT-----------------------------------GGATCC------CTCTATGATA----------CTTCGTTGCAG-----------------CTTAGAT--- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1334490 283 - 2905041 C-ACCTTGGGAAGTTATTGACAGAATTAAGTCAAATGACAGAATCGAAAGACTGACTCATGTCAGGAACT-GGGAGATCCGGTTCCTTCTC----TCATGCTTCGATTCCCTCATCTCCTGCAGCACCAAAGGCATTGCAGGCTC--ACCCTGTAGCACTCAGGTAAA-CACAGTCACACCGTCT-ACACTGCCTGCTGGATATGTCAAAGTCTTAAAGTTATAACCCACTTTTT----------CTGT----CTGCACTGCCC-CTCCCATGT-----------------------------------GGAGCC------CTCTATGACA----------CTTCATTGCAG-----------------CTTAGAT--- i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1299202 276 - 2164891 C-ACCTTGGGAAGTTATTGTGAGAATTAAGTCAAGTAACAGAATCGAAAGACTGACTCACGTCAGGAACT-GGGAGATCCAGTTCTTTCTGTCC-TCACGCTTCGATTCCCTCATCTCCTGCAGCACCAAAGGCATCACAGGCTC--ACCCTGTAGCACTCAAGTAAACCACAATCACACCATCTCACGCTGCCTGCTGGATATGTCCAAGGCTTAAAGTTATAA-----------------------T----CTGCACTGCCCCCTCCCGTGT-----------------------------------GGAGCC------CACTATGACA----------CTTCATTGCAG-----------------CTTAGAT--- i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1544095 285 - 1813869 C-ACCTTGGGAAGTTATTGAGAGAATTAAGTCAA-TAACAGAATTGAAAGACTGACTCATGTCAGGAACT-GGGAGATCCAGCTCCTCTCCT---TCATGCTTCGATTCCCTCATCTCCTGCAGCACCAAAGGCATCGCAGGCTC--ACCCTGTAGCACTCAGGTAAACCACGATCACACCAGCTCACACTGCCTGC-GGATATATCAAAGGCTTAAAGTTATAACCCACTTTTT----------CTGT----CTTCACTGTCCCCTCCCGTGT-----------------------------------GGATCC------CTCTATGACA----------CTTCATTGCAG-----------------CTTAGAT--- i aotNan1.NW_018494782v1 C 0 C 0 s dasNov3.JH569188 623917 363 + 760995 C-ACCTTCAGGAGTTTCTACGAGGATTAAACCAAATAACAAATACAAAATA------CACGTTAGAAGCTCAAAAAATCCAGTT-TTCCTCTTAGTCAAGATCAGAGGAATTGATTTACTACAG---CAGAGAAATCACTGACTCCCACCCTAATCCCCAGGGGTAAATTACAATGACACAACCTCACATTGCTCACTTAG-GTGGTGAAGGCTTAAACCCATAAAACACTTTCTCAGACTTCCCCTGT----CTTCTCTGTCTTCTTTCATTTTGTTTCCCTAAGAATACAGATAAACTCCTTTCTTCATATCCCACGGTCTCTAAAACAAGTAAGGTTTCTTTCTTTCTGTCCCTAAAGTCTGTGACTTAATATCAC i dasNov3.JH569188 I 4 C 0 e otoGar3.GL873575 10977942 896 - 12073884 I e canFam3.chr1 56208380 313 + 122678785 I e cerAty1.NW_012002071v1 1436837 1634 + 3144229 I a score=4570455.000000 s hg38.chr6_KB021644v2_alt 146955 539 + 185823 CCTGAAACTCTCAG--------------------------------------------------------------CTAGCAATTCTCTTCCCTGCCTCAG-TTCTCCATTGTGATCAGCATGCCCTGGGCCTCCCCCAGGTTCCCTTCCTTCCCATCATTGGGTGCGTTCCTGCTTAGC-GCCTTATCCCAG-CTGCTCCTC--ACAC------CCTCA--CCTTTTTCCAGAT-AGATCTTCCTCTTCTGCACAGGCTCCTCCCGGCTTCTCATCTGTTCTGAAAGCCAGCACGATTCCACGATCCTCAGATCACATTG-CACACC-GAAGAC-CCCAGTGATCACCTACTGCCTGGAATCTTCGCCTTGCACCCCCACCCTCCTG----------TTCCTGCCTATCCAACATGG--ATTTCCTTACAGCACTGG-CCTAGAACAAA-ATCAACCTGCAACTTTC-----TTCCATTTCTTCT---------------GACTCAATGAAAA--------CATGGATGCAGCTCTGTCTTCATCCAGGACAG-GCCCCTCCT-GCACTTGAATGACT---TTGTGTACTTCTCAATGTCCTGTCCTGTTGAGTTTGCTTCGATTTCTATTTGTCTAATGAAATCAGTTCAACATTTTTGGAAA s panTro5.chr6 173603687 541 + 175400573 CCTGAAACTCTC------------------------------------------------------------------AGCAATTCTCTTCCCTGCCTCAGTTTCTCCATTGTGATCAGCATGCCCTGGGCCTCCCCCAGGTTCCCTTCCTTCCCATCATTGGGTGCGTTCCTGCTTAGC-GCCTTATCCCAG-CTGCTCCTC--ACAC------CCTCA--CCTTTTTCCAGAT-AGATCTTCCTCTTCTGCACAGGCTCCTCCTGACTACTTATCTGTTCTGAAAGCCAGCACGATTCCACGATCCTCAGATCACATTG-CACACC-GAAGAC-CCCAAAGGTCACCTACTGCCTGGAATATTCGCCTTGCACCCCCACCCTCCTG----------TTCCTGCCTATCCAACATGG--ATTTCCTTACAGCACAGG-CCTAGAACAAA-ATCAACCTGCAACTTTCAGTAATTCCATTTCTTCT---------------GACTCAGTGAAAA--------CATGGATGCAGCTCTGTCTTCATCCAGGACAG-GCCCCTCCT-GCACTTGAATGACT---TTGTGTACTTCTCAATGTCCTGTCCCGTTGAGTTTGCTTCGATTTCTATTTGTCTAATGAAATCAGTTCAACATTTTTGGAAA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171837013 541 + 173848474 CCTGAAACTCTC------------------------------------------------------------------AGCAATTCTCTTCCCTGCCTCAGTTTCTCCATTGTGATCAGCATGCCCTGGGCCTCCCCCAGGTTCCCTTCCTTCCCATCATTGGGTGCGTTCCTGCTTAGC-GCCTTATCCCAG-CTGCTCCTC--ACAC------CCTCA--CCTTTTTCCAGAT-AGATCTTCCTCTTCTGCACAGGCTCCTCCTGACTACTTATCTGTTCTGAAAGCCAGCACGATTCCACGATCCTCAGATCACATTG-CACACC-GAAGAC-CCCAAAGGTCACCTACTGCCTGGAATATTCGCCTTGCACCCCCACCCTCCTG----------TTCCTGCCTATCCAACATGG--ATTTCCTTACAGCACAGG-CCTAGAACAAA-ATCAACCTGCAACTTTCAGTAATTCCGTTTCTTCT---------------GACTCAGTGAAAA--------CATGGATGCAGCTCTGTCTTCATCCAGGACAG-GCCCCTCCT-GCACTTGAATGACT---TTGTGTACTTCTCAATGTCCTGTCCCGTTGAGTTTGCTTCGATTTCTATTTGTCTAATGAAATCAGTTCAACATTTTTGGAAA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11520050 544 - 12463322 CCTGAAACTCTCAG--------------------------------------------------------------CTAGCAATTCTCTTCCCTGCCTCAGTTTCTCCATTGTGATCAGCATGCCCTGGGCCTCCCCCAGGTTCCCTTCCTTCCCATCATTGGGTGCGTTCCTGCTTAGC-GCCTTATCCCAG-CTGCTCCTC--ACAC------CCTCA---CTTTTTCCAGAT-AGATCTTCCTCTTCTGCACAGGCTCCTCCCTGCTTCTCTTCAGTTCTGAAAGCCAGCACAATTCCATGATCCTCAGATCACATTG-CACACC-GAAGAC-CCCAATGATCACCTACTGCCTGGAATATTCGCCTTGCACCCCAACCCTCCTG----------TTCCTGCCTATCCAACATGG--ATTTCCTTACAGCACTGG-CCTAGAACAAA-ATCAACCTGCAACTTTCAGTAATTCCATTTCTTCT---------------GACTCAATGAAAA--------CATGGATGCAGCTCTGTCTTCATCCAGGACAG-GCCCCTCCT-GCACCTGAATGACT---TTGTGTACTTCTCAATGTCCTGTCCCGTTGAGTTTGCTTTGACTTCTATTTGTCTAATGAAATCAGTTCAACATTTTTGGAAA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156350046 543 + 157873769 CCTGAAACTCTCAG--------------------------------------------------------------CTAGCAATTATCTTCCTCATCTCAGTTTCTCCATTGCGATCAGCATGGCCTGGGCCTCCCCCAGGTTCCCTTCCTTCCCATCATTGGGTGCATTCCTGCTTAGC-GCCTTATCCCAG-CTGCTCCTC--ACAC------CCTCA--CCTTTTTCCAGAT-AGATCTTCCTCTTCGGCACAGGCTCCTCTCGGCTTCTCATCTGTTCTGAAAGGCAGGACGATTCCACAATCCTCAGGTCACATTG-CACACC-GACGAC-CCCAATGCTCGCCTACTGCCTGGAACATTCACCTTGCACCCCCACCCTCCTG----------TTCCTGCCTATCCAACGTGG--ATTTCCTTACAGCACTGG-CCTAGAACAAA-ATCGACCTGCAACTTTCAGTAATTCCATTTCTTCT---------------GACTCAATGAAAA--------CATGGATGGGG--CTGTCTTCATCCAGGACAG-GCCCCTCCT-GCACTTGGATGACT---TTGCATACTTCCCAATATCCTGTCCCGTTGAGTTTGCTTCGATTTCTATTTGTCTAATGAAATCAGTTTAACATTTTTGGAAA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170374752 544 + 172585720 CCTGAAACTCTCAG--------------------------------------------------------------CTAGCAATTGTCTTCCTTGCCTCAGTTTCTCCCTTGTGACCAGCATGCCCTGAGCCTCCTCCAGGTTCCCTTCCTTCCCATTATTGGGTGCGCTCCTGCTTAGC-GCCTTATCCCAG-CTGCTCCTC--ACAC------CCTCG--CCTTCTTCCAGAT-AGATCTTCCTCCTCTGCACAGA-TCCTCCCGGCTTCTCATCTGTTCTGAAAGTCAGCACGATTCCACGATCCTCAAATCACATTG-CACACC-AAGGAC-CCCGATGCTCACCTATTGCCTGGAACATTCACCTTGCCCCACCACCCTCTTG----------TTCCTGCCTATCCAGCATGG--ATTTCCTTACAGCACTGG-CCTAGAACAAA-ATCAACCTGCAACTTTCAGTAATTCCATTTCTTCT---------------GACTCAATGAAAA--------CATGGATGGGGCTCTGTCTTCCCCCAGGACAG-GCCCCTCCT-GCACTTGGATGGCT---TTGCTCACTTCCCAATGTCCTGTCACGTTGAGTTTGCTTCAACTTCTATTTGTTCAATGAAATCAGTTTAACATTTTCGGAAA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169120055 544 - 170955103 CCTGAAACTCTCAG--------------------------------------------------------------CTAGCAATTGTCTTCCTTGCCTCAGTTTCTCCCTTGTGACCAGCATGCCCTGAGCCTCCTCCAGGTTCCCTTCCTTCCCATTATTGGGTGCGCTCCTGCTTAGC-GCCTTATCCCAG-CTGCTCCTC--ACAC------CCTCG--CCTTCTTCCAGAT-AGATCTTCCTCCTCTGCACAGA-TCCTCCCGGCTTCTCATCTGTTCTGAAAGTCAGCACGATTCCACGATCCTCAAATCACATTG-CACACC-AAGGAC-CCCGATGCTCACCTATTGCCTGGAACATTCACCTTGCCCCACCACCCTCTTG----------TTCCTGCCTATCCAGCGTGG--ATTTCCTTACAGCACTGG-CCTAGAACAAA-ATCAACCTGCAACTTTCAGTAATTCCATTTCTTCT---------------GACTCAATGATAA--------CATGGATGGGGCTCTGTCTTCCCCCAGGACAG-GTCCCTCCT-GCACTTGGATGGCT---TTGCGCACTTCCCAATGTCCTGTCACGTTGAGTTTGCTTCAACTTCTATTTGTTCAATGAAATCAGTTTAACATTTTCGGAAA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8406403 544 + 10161646 CCTGAAACTCTCAG--------------------------------------------------------------CTAGCAATTGTCTTCCTTGCCTCAGTTTCTCCCTTGTGACCAGCATGCCCTGAGCCTCCTCCAGGTTCCCTTCCTTCCCATTATTGGGTGCGCTCCTGCTTAGC-GCCTTATCCCAG-CTGCTCCTC--ACAC------CCTCG--CCTTCTTCCAGAT-AGATCTTCCTCCTCTGCACAGA-TCCTCCCGGCTTCTCATCTGTTCTGAAAGTCAGCACGATTCCACGATCCTCAAATCACATTG-CACACC-AAGGAC-CCCGATGCTCACCTATTGCCTGGAACATTCACCTTGCCCCACCACCCTCTTG----------TTCCTGCCTATCCAGCGTGG--ATTTCCTTACAGCACTGG-CCTAGAACAAA-ATCAACCTGCAACTTTCAGTAATTCCATTTCTTCT---------------GACTCAATGAAAA--------CATGGATGGGGCTCTGTCTTCCCCCAGGACAG-GCCCCTCCT-GCACTTGGATGGCT---TTGCGCACTTCCCAATGTCCTGTCACGTTGAGTTTGCTTCAACTTCTATTTGTTCAATGAAATCAGTTTAACATTTTCGGAAA i macNem1.NW_012011000v1 C 0 C 0 s chlSab2.chr13 96723844 545 + 98384682 CCTGAAACTCTCAG--------------------------------------------------------------CTAGCAATTCTTTTCCTTGCCTCAGTTTCTCCATTGTGACCAGCATGCCCTGGGCCTCCTCCAGGTTCCCTTCCTTCCCATTATTGGGTGCGCTCCTGCTTAGC-GCCTTATCCCAG-CTGCTCCTC--ACAC------CCTCC--CCTTTTTCCAGGC-AGATCTTCCTCTTCTGCACAGACTCCTCCTGGCTTCTCATCTGTTCTGAAAGTCAGCACGATTCCACGATCCTCAAATCACATTG-CACACC-AAGGAC-CCCAATGCTCACCTATTGCCTGGAACATTCACCTTGCCCCACCACCCTCTTG----------TTCCTGCCTATCCAGCGTGG--ATTTCCTTACAGCACTGG-CCTAGAACAAA-ATCAACCTGCAACTTTCAGTAATTCCATGTCTTCT---------------GACCCAATGAAAA--------CATGGATGGGGCTCTGTCTTTACCCAGGACAG-GCCCCTCCT-GCACTTGGATGACT---TTGCACACTTCCCAATGTCCTGTCACGTTGAGTTTGCTTCAACTTCTATTTGTTCAATGAAATCAGTTTAACATTTTCGGAAA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8269606 545 - 10857215 CCTGAAACTCTCAG--------------------------------------------------------------CTAGCAATTCTTTTCCCTGCCTCAGTTTCTCCATTGTGACCAGCATGCCCTGGGCCTCCTCCAGGTTCCCTTCCTTCCCATTATTGGGTGCGCTCCTGCTCAGC-GCCTTATCCCAG-ATGCTCCTC--ACAC------CCTTG--CCTTTTTCCAGAT-AGATTTTCCTCTTCTGTACAGACTCCTCCCGGCTTCTCATCTGTTCTGAAAGTCAGCACGATTCCATGATCCTCAAATCACATTG-CACACC-AAGGAC-CCCGATGCTCACCTATTGCCTGGAACATTCACCTTGCCCCACCACCCTCTTG----------TTCCTGCCTATCCAGCGTGG--ATTTCCTTACAGCACTGG-CCTAGAACAAA-ATCAACCTGCAACTTTCAGTAATTCCATTTCTTCT---------------GACCCAATGAAAA--------CATGGATGGGGCTCTGTCTTCCCCCAGGACAG-GCCCCTCCT-GCACTTGGATGGCT---TTGCGCACTTCCCAATGTCCTGTCACGTTGAGTTTGCTTCAACTTCTATTTGTTCAATGAAATCAGTTTAACATTTTCGGAAA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15649652 543 - 23502949 CCTGAAACTCTCAG--------------------------------------------------------------CTAGCAATTATCTTCCTTGCCTCAGTTTCCCCATTGTGACCAGCATGCCCTGGGCCTCCTCCAGGTTCCCTTCCTTCCCATTATTGGGTGTGCTCCTGCTTAGC-GCCTTATCCCAG-CTGCTCCTC--ACAC------CCTCG--CCTTTCTCCagat-agatcttcctcttctgcgcaaactcctcctggcttctcatctgttc--aaagtCAGCACGATTCCACGATCCTCAAATCACATTG-CACACC-AAGGAC-CCCAATGCTCACCAATTGCCTGGAACATTCACCTTGCCCCACCACCCTCTTG----------TTCCTGCCTATCCAGCCTGG--ATTTCCTCACAGCACTGG-CCTAGAACAAA-ATCAACCTGCAACTTTCAGTAATTCCATTTATTCT---------------GACTCAATGAAAA--------CATGGATGGGGCTCTGTCTTCACCCAGGACAG-GCCTCTCCT-GCACTTGGATGACT---TTGTGCGCTTCCCAATGTCCTGTCACGTTGAGTTTGCTTCAACTTCTATTTGTTCAATGAAATCAGTTTAACATTTTCGGAAA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169934231 541 + 171630274 -CTGAAACTCCCAG--------------------------------------------------------------CTACCAAGACTCTTCCTTGCCTCAGTTTCTCCGCTGTGACCGGCATGGCCTGGGCCTCCCTCAGGCTCCCCTCCTT-CCATCATCAGGTGCGCTCCAGCCTAGC-ACCTTATCCCAG-CTGCTCCTC--ACAC------CCTCA--CCTTTCTCGTGCT-GGATCTTCCTCTTCTGCACAGACTCCTC-TGGCTTCTCATCTGTTCTGAAAGGCAGTGAGATCTCACGACCCTCAGGTCACATAG-CACATC-GAAGAC-CCCAATGCTCCTCTGCTGCCTGGAACATTCACCTTCCACAAACGCCGTCCCA----------TTCCTGGCTAT-CAACATGT--ATTTCCTTACAGCAATGG-CCTAGAACAAA-ATCAGCCTGCAGCTTTCGGTGATTCAGCTTCTCCT---------------GACTCAATGAAAA--------CATGGATGGGACTCTGTCTTCCAACAGGACAG-ACCCCTCAT-GCATCTGGACGACT---TTGCGCTCCTCCCAACGTCCTGACCTACTGAGTTTGCCTCTACCTCTATTTGTCTAATGAAATCAGTTTAACGTTTCTGGAAG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1334773 537 - 2905041 -CTGAAACTCCCAG--------------------------------------------------------------CTAGCAAGCCTCTTCCTTGCCTCAGTTTCTCCACTGTGACCAGGATGGCCTGGGCCTCCCTCAGGCTCCCCTCCTTCCCATCACTGGGTGCACTCCAGCCTGGC-ATCTTATCCCAG-CTGCTCCTC--ACCC------CCTCA--CCTCTTTCGTGCT-TGATCTTCCTCTTCTGCACGGATTCCTC-TGGCTTCCCATCCGTTCTGAAAGGCAGTGAGATCTCACAATCCTCAGACCATCTAG-CACATC-AAAGAC-CCTGACGCTCCCCTACTGCCTGGAATATTCACCCTCCACCACCACCGTCCCA----------TTCCTGGCTAT-CAAC------ATTTCCTTACAGCAATGG-CCTAGAACAAA-ATCAACCCACAGCTTTCAGTAATTCAGTTTCTCCA---------------GACTCAATGAAAA--------CATGGATGGGGCTCTGTCTTCCAGCAGGACAG-A-CCCTCAT-GCATCTGGACGACT---TTGCACACTTCCCAATGTCCTGACCTACCGAGTTTGCCTAGACCTCTATTTGTCTAATGAAATCAGTTTAACATTTTTGGAAG i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1299478 542 - 2164891 -CTGAAACTCCCAG--------------------------------------------------------------CTAGCAAGCCTCTTCCTTGCCTCAGTTTCTCCACTGTGACCAGCATGGCCTGGGCCTCCCTCAGGCTCCCCTCCTTCCCGTCATTGGGTGCACTCCAGCCTAGC-ACCTTGTCCCAG-CTGCTCCTC--ACAC------CCTCA--CCTTTTTCGCGCT-TGATCATCCTCTTCTGCACAGATTCCTC-TGGCTTCTCATCTGTTGTGAAAGGCAGTGAGATCTCATGATCCTCAGATCACGTAG-CACATT-GAAGAC-CCCGATGCTCCCCTACTGCCTGGAACATTCACCTTCTGCCACCACCGTCCCA----------TTGCTGGCTAC-CAACATGT--ATTTCCTTACAGCAGTGG-CCTAGAACAAA-ATCAACCTGCAGCTTTCAGTAATTCAGTTTCTCCT---------------GACTCAATGAAAA--------CATGGATGGGGCTCTGTCTTCCAGCAGGACAG-ACCCCTCAT-GCATCTGGACGACT---TTGCACActttccaatgtcctgacctactgagtttgcctcgacctctatttgtctaatgaAATCAGTTTAACATTTTTGGGAG i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1544380 541 - 1813869 -CTGAAACTCCCAG--------------------------------------------------------------CTAGCAAGCTTCTTCCTTGCCTCAGTTTCTCCACTGTGACCAGCATGGCCTGGGCCTCCCTCAGGCTCCCCTCCTTCCCATCACTGGGTGCGCTCCAGCCTAGC-ACCTTATCCCAG-CTGATCTTC--ACAC------CCTCA--CCTTTTTCACGCT-GGATCTTCCTCTTCTGC-CAGATTCCTC-TGGCTTCTCAGCTGTTCTGAAAGGCAGTGAGATCTCACGATCCTCAGATCACATAG-CACATC-AAAGAC-CCTGATGCTCCCCTACTGCCTGGAACATTCACTTTCCGCCACCACTGTCCCA----------TTCCTGGCTAT-CAACATGT--ATTTCCTTACAGCAATGG-CCTAGAACAAA-ATCAACCTGCAGCTTTCAGTAATTCAGTTTCTCCT---------------GAGTCAATGAAAA--------CATGGATGGGGCTCTGTCTTCCAACAGGACAG-ATCCCTCAT-GCATCTGGACGACT---GTGCGCACTTCCCAATGTCCTGACCTACTGAGTTTTCCTCGACCTCTATTTGTCTAATGAAATCAGTTTAACATTTTTGGAAG i aotNan1.NW_018494782v1 C 0 C 0 s canFam3.chr1 56208693 555 + 122678785 CCTAAAACTCCCTG-------------------------------------------------------------TCCAGTGAGCCCTTTGCTTGCCTTGGTTTCTCCACAGTGATCCGCACACTCTGGGCCTCTCCCATAT--CTGTCCTTTCTGTCACC-GATGGGTTCCTGGGCAGT-GGATCTCTGCAGTCTGCTTCCTGAACAT------CCTTGGGCCTCCTCTCTGCTCTGATCTTGCTCTTCC---TGGATGTCTC----TGTTTCATCTCTTCCTAAATCCAGTGGGATCCTAAAATCCCTAGACTGGGCTA-CACAGCGGAAGACGCCAGACGCTCACCAGCTGGGTTGAAAATCTGTTCCTCCCCCTACCTCCCCCA----------TTTCTACTCATCCAATCTGTTCCTCTCCTTCCAGCACTTG-CCTGGAACAAAGGTAAGCCTGGGCTTGACAATCATTT-GCTTCCTCT---------------GACTCCAGACAGAGGGCATGCCATTGGGTGACCCCCACCTTTACCTGGGACGGAGTTCACCCA-GAACCCGA--GGCTCGCTTACTTCCTTACCAACATCC-ATCCCACTGGGACGGCCTCCGTTTCCACATGTCCGATGGCATCCGTTCAGAGTTCTCAGGGA i canFam3.chr1 I 313 I 4044 s dasNov3.JH569188 624280 623 + 760995 TTTGAAATTCTCTTTTAACAATCTCATGAAACAATGACTCAGCCAGCGTCCCTCAGGACACTATAAAGTTCTCTGTCTTGCAAGCCTCTTTCTTGCCTCAGTTTCTCCCCTGCAATCAGCACGTCTCGGGCACCTCCCAGCTTCCCTTCCTTCCTACCCTCTAATGCATTCTTTGTCAGCTGATCAATCCCCC-TAGCTGCTT--ACACATTCTTCCTTC--CTTCTTTCTACTT-GGATCTTCCTCTCCTACACTGCTTTCTCTCAGTTGCCTTCTTCATCCCACAGCCAGAAAGCTTCTAAAATCCTCAGATTGCACTGAAACGCT-GAAGTCTCCAGATACACATCTACTATGTCAGA-ATTCACTTCTATCCCACAGTTTCCAGATTTTTCTATCTTCTGCCTATC----------AT----TTACAACATTTGCCCTAGAACAAC-AATAAACCAAAGCTGCCAATAGATCAATAAGCTCTAAGAAAGGTGAAGCAGGCTCACTGAACA--------TCT------ACCCTTGCCTTCACCAAGGAGAG-AATTTGCCTCAGATTTGAACAACT---GTAAGTTCTTACTAATGTCTTATTCCTATACCTTTCATTTCATTT-TCTCTGTCTAATGAAATCAAGTTAGAGTTTTCAGAAA i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10977942 896 - 12073884 I e cerAty1.NW_012002071v1 1436837 1634 + 3144229 I a score=156633.000000 s hg38.chr6_KB021644v2_alt 147494 22 + 185823 GGATTCCTACATTCCACACATA s panTro5.chr6 173604228 22 + 175400573 GCATTCCTACATTCCACACACA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171837554 22 + 173848474 GCATTCCTACATTCCACACACA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11520594 22 - 12463322 GCATTCCTACATTCCACACACA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156350589 22 + 157873769 GCATTCCTACATTCCACACACA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170375296 22 + 172585720 ACATTCCTACATTCCACACCCA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169120599 22 - 170955103 ACATTCCTACATTCCACACCCA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8406947 22 + 10161646 ACATTCCTACATTCCACACCCA i macNem1.NW_012011000v1 C 0 C 0 s chlSab2.chr13 96724389 22 + 98384682 ACATTCCTACATTCCACACCCA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8270151 22 - 10857215 ACATTCCTACATTCCACACCCA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15650195 22 - 23502949 ACATTCCTACATTCCACACCCA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169934772 18 + 171630274 ACATTCCTA----CCACACACA i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1335310 18 - 2905041 ACATTCCTA----CCACAAACA i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1300020 18 - 2164891 ACATTCCTG----CCACACACA i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1544921 18 - 1813869 ACATTCCTA----TCACACACA i aotNan1.NW_018494782v1 C 0 C 0 s dasNov3.JH569188 624903 22 + 760995 ACACTCTTACTTTGCACTAATA i dasNov3.JH569188 C 0 I 6033 e otoGar3.GL873575 10977942 896 - 12073884 I e canFam3.chr1 56209248 4044 + 122678785 I e cerAty1.NW_012002071v1 1436837 1634 + 3144229 I a score=165692.000000 s hg38.chr6_KB021644v2_alt 147516 18 + 185823 -GTGCTGAGGGTAGGATCT s panTro5.chr6 173604250 18 + 175400573 -GTGCTGAGGGTAGGATCT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171837576 18 + 173848474 -GTGCTGAGGGTAGGATCT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11520616 18 - 12463322 -GTGCTGAGGGTAGGATCT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156350611 18 + 157873769 -GTGCTGAGGTTAGGATCT i nomLeu3.chr3 C 0 I 145 s rheMac8.chr4 170375318 18 + 172585720 -GTGCTGAGGGTAGGATCT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169120621 18 - 170955103 -GTGCTGAGGGTAGGATCT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8406969 18 + 10161646 -GTGCTGAGGGTAGGATCT i macNem1.NW_012011000v1 C 0 C 0 s chlSab2.chr13 96724411 18 + 98384682 -GTGCTGAGGGTAGGATCT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8270173 18 - 10857215 -GTGCTGAGGGTAGGATCT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15650217 18 - 23502949 -GTGCTGAGGGTAGGATCT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169934790 19 + 171630274 TGTGCTGAAGGCAGGATCT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1335328 19 - 2905041 TGTGCTAAGGGCAGGATCT i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1300038 19 - 2164891 TGTGCTGAGTGCAGGATCT i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1544939 19 - 1813869 TGTGCTGAGGGCAGGATCT i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10977942 896 - 12073884 I e dasNov3.JH569188 624925 6033 + 760995 I e canFam3.chr1 56209248 4044 + 122678785 I e cerAty1.NW_012002071v1 1436837 1634 + 3144229 I a score=373215.000000 s hg38.chr6_KB021644v2_alt 147534 45 + 185823 CTGCTGAAAGCCACACCTGCTCAGGCCTACCTGCTGAAAGCCACA s panTro5.chr6 173604268 45 + 175400573 CTGCTGAAAGCCACACCTGCTCAGGCCCACCTGCTGAAAGCCACA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171837594 45 + 173848474 CTGCTGAAAGCCACACCTGCTCAGGCCCACCTGCTGAAAGCCACA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11520634 45 - 12463322 CTGCTGAAAGCCACACCTGCTCAGGCCCACCTGCTGAAAGCCACA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156350774 45 + 157873769 CTGCTGAAAGCCGCACCTGCTCAGGCCCACCTGCCGAAAGCCGCA i nomLeu3.chr3 I 145 C 0 s rheMac8.chr4 170375336 44 + 172585720 CTGCTGAAAGCCACACCGGCTCAGGT-CACCTGCTGAAAGCCACA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169120639 44 - 170955103 CTGCTGAAAGCCACACCTGCTCAGGT-CACCTGCTGAAAGCCACA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8406987 44 + 10161646 CTGCTGAAAGCCACACCTGCTCAGGT-CACCTGCTGAAAGCCACA i macNem1.NW_012011000v1 C 0 I 763 s chlSab2.chr13 96724429 44 + 98384682 CTGCTGAAAGCCACACCTGCTCAGGT-CACCTGCTGAAAGCCACA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8270191 44 - 10857215 CTGCTGAAAGCCACACTTGCTCAAGT-CACCTGCTGAAAGCCACA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15650235 45 - 23502949 CTGCTGAAAGCCACACCAGCTCAGGTCCACCTGCTGAAAGCCACA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169934809 45 + 171630274 CTGCTGAAAGCCACACCTGCCCACAATCACCTGCTGAAAGCCACA i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1335347 45 - 2905041 CTGCTGAAGGCCACACCTGCTCGTGTTCACCTGCTGAAAGCCACC i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1300057 45 - 2164891 CTGCTGAAAGCCACACCTGCTCAGATCCACCTGCTAAAAGCCACA i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1544958 45 - 1813869 CTGCTGAAAGCCACACCTGCTCGGCATCACCTGCTGAAAGCCGCA i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10977942 896 - 12073884 I e dasNov3.JH569188 624925 6033 + 760995 I e canFam3.chr1 56209248 4044 + 122678785 I e cerAty1.NW_012002071v1 1436837 1634 + 3144229 I a score=9100.000000 s hg38.chr6_KB021644v2_alt 147579 1 + 185823 C s panTro5.chr6 173604313 1 + 175400573 C i panTro5.chr6 C 0 C 0 s panPan2.chr6 171837639 1 + 173848474 C i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11520679 1 - 12463322 C i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156350819 1 + 157873769 C i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170375380 1 + 172585720 C i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169120683 1 - 170955103 C i macFas5.chr4 C 0 C 0 s chlSab2.chr13 96724473 1 + 98384682 C i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8270235 1 - 10857215 C i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15650280 1 - 23502949 C i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169934854 1 + 171630274 C i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1335392 1 - 2905041 C i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1300102 1 - 2164891 C i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1545003 1 - 1813869 C i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10977942 896 - 12073884 I e dasNov3.JH569188 624925 6033 + 760995 I e canFam3.chr1 56209248 4044 + 122678785 I e cerAty1.NW_012002071v1 1436837 1634 + 3144229 I e macNem1.NW_012011000v1 8407031 763 + 10161646 I a score=64379.000000 s hg38.chr6_KB021644v2_alt 147580 7 + 185823 CTGCTCA s panTro5.chr6 173604314 7 + 175400573 CTGCTCA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171837640 7 + 173848474 CTGCTCA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11520680 7 - 12463322 CTGCTCA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156350820 7 + 157873769 CTGCTCA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170375381 7 + 172585720 CTGCTCA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169120684 7 - 170955103 CTGCTCA i macFas5.chr4 C 0 C 0 s cerAty1.NW_012002071v1 1438471 7 + 3144229 CTGCTCA i cerAty1.NW_012002071v1 I 1634 C 0 s chlSab2.chr13 96724474 7 + 98384682 CTGCTCA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8270236 7 - 10857215 CGGCTCA i manLeu1.NW_012106474v1 C 0 M 824 s colAng1.NW_012114488v1 15650281 7 - 23502949 CTGCTCA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169934855 7 + 171630274 CTGCCCA i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1335393 7 - 2905041 CTGCTCA i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1300103 7 - 2164891 CTGCTCA i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1545004 7 - 1813869 CTGCTCG i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10977942 896 - 12073884 I e dasNov3.JH569188 624925 6033 + 760995 I e canFam3.chr1 56209248 4044 + 122678785 I e macNem1.NW_012011000v1 8407031 763 + 10161646 I a score=207294.000000 s hg38.chr6_KB021644v2_alt 147587 36 + 185823 -GGTCACCTG------------------------------------------------------------------------------------------CTGAAAGCCG--CACCTGCTCAGG-TCACC s panTro5.chr6 173604321 36 + 175400573 -GGTCACCTG------------------------------------------------------------------------------------------CTGACAGCCG--CACCTGCTCAGG-TCACC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171837647 36 + 173848474 -GGTCACCTG------------------------------------------------------------------------------------------CTGACAGCCG--CACCTGCTCAGG-TCACC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11520687 38 - 12463322 -GGTCACCTG------------------------------------------------------------------------------------------CTGAAAGCCGCACACCTGCTCAGG-TCACC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156350827 36 + 157873769 -GGTCACCTG------------------------------------------------------------------------------------------CCGAAAGCCG--CACCTGCTCAGG-TCACC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170375388 36 + 172585720 -AGTCACCTG------------------------------------------------------------------------------------------CTGAAAGCCA--CACCTGCTCAAG-TCACC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169120691 36 - 170955103 -AGTCACCTG------------------------------------------------------------------------------------------CTGAAAGCCA--CACCTGCTCAAG-TCACC i macFas5.chr4 C 0 C 0 s cerAty1.NW_012002071v1 1438478 36 + 3144229 -GGTCACCTG------------------------------------------------------------------------------------------CTGAAAGCCA--CACCTGCTCAGG-TCACC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96724481 36 + 98384682 -AGTCACCTG------------------------------------------------------------------------------------------CTGAAAGCCA--CACCTGTTCAGG-TCACC i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15650288 36 - 23502949 -GGTCACCTG------------------------------------------------------------------------------------------CTGAAAGCCA--CACCTGCTCAGG-TCACC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169934862 38 + 171630274 GGATCACCTG------------------------------------------------------------------------------------------CTGAAAGCCA--CACCTGCCCAGGATCACC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1335400 128 - 2905041 GGTCTACCTGCTGAAAGCCACACCTGTTTGGGTCCACCTGCCAAAAGCCACACCTGCTGGGGTCCACCTGCTGAAATCCACACCTACTCGGGTCCACCTCCTGAAAGCCA--CACCTGCTCAGGATCGCC i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1300110 38 - 2164891 GGATCACCTG------------------------------------------------------------------------------------------CAGAAACCCA--CACCTGCTCAGGATCACC i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1545011 38 - 1813869 GGATCACCTG------------------------------------------------------------------------------------------CTGGAAGCCA--CACCTGCTCGGGTCCACC i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10977942 896 - 12073884 I e dasNov3.JH569188 624925 6033 + 760995 I e canFam3.chr1 56209248 4044 + 122678785 I e manLeu1.NW_012106474v1 8270243 824 - 10857215 M e macNem1.NW_012011000v1 8407031 763 + 10161646 I a score=350932.000000 s hg38.chr6_KB021644v2_alt 147623 45 + 185823 TGCTGAAAGCCGCACCTGCTCAGGT-CACC------------------------------TGCTGACAGCCGCACC s panTro5.chr6 173604357 45 + 175400573 TGCTGAAAGCCGCACCTGCTCAGGT-CACC------------------------------TGCTGACAGTCACACC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171837683 45 + 173848474 TGCTGAAAGCCGCACCTGCTCAGGT-CACC------------------------------TGCTGACAGTCGCACC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11520725 45 - 12463322 TGCTGACAGCCGCACCTGCTCAGGT-CACC------------------------------TGCTGAAAGCCCCACC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156350863 45 + 157873769 TGCCGAAAGCCGCACCTGCTCAGGT-CACC------------------------------TGCCGAAAGCCGCACC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170375424 45 + 172585720 TGCTGAAAGCCACACCTGCTCAGGT-CACC------------------------------TGCTGAAAGTCACACC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169120727 75 - 170955103 TGCTGAAAGCCACACCTGCTCAGGT-CACCTGCTGAAAGTCACACCTGCTCAGGCCCACCTGCTGAAAGCCACACC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8407794 46 + 10161646 TGCTGAAAGCCGCACCTGCTCAGGC-CACCG-----------------------------TGCTGAAAGCCACACC i macNem1.NW_012011000v1 I 763 I 335 s cerAty1.NW_012002071v1 1438514 45 + 3144229 TGCTGAAAGCCACACCTGCTCAGGT-CACC------------------------------TGCTGAAAGCCACACC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96724517 45 + 98384682 TGCTGAAAGCCACACCTGCTCAGGT-CCAT------------------------------TGTTAAAAGCCACACC i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15650324 45 - 23502949 TGCTGAAAGCCACACCTGCTCAGGT-CACC------------------------------TGCTGAAAGCCACACC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169934900 46 + 171630274 TGCTGAAAGCCACACCTGCTCAGGATCACC------------------------------TGCTGAAAGCCACACC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1335528 46 - 2905041 TGCTGAAAGCCACACCTTCTCAGGTCCACC------------------------------TGCTGAAAGCCACACC i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1300148 46 - 2164891 TGCAGAAAGCCACACCTGCTCAGGTCCACC------------------------------TGCTGAAAGCCACACC i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1545049 46 - 1813869 TGCTGGAAGCCACACCTGCTCGGGTCCACC------------------------------TGCTGAAATTCACACC i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10977942 896 - 12073884 I e dasNov3.JH569188 624925 6033 + 760995 I e canFam3.chr1 56209248 4044 + 122678785 I e manLeu1.NW_012106474v1 8270243 824 - 10857215 M a score=33176.000000 s hg38.chr6_KB021644v2_alt 147668 4 + 185823 TGCT s panTro5.chr6 173604402 4 + 175400573 TGCT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171837728 4 + 173848474 TGCT i panPan2.chr6 C 0 T 29 s gorGor5.CYUI01015032v1 11520770 4 - 12463322 TGCT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156350908 4 + 157873769 TGCT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170375469 4 + 172585720 TGCT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169120802 4 - 170955103 TGCT i macFas5.chr4 C 0 C 0 s cerAty1.NW_012002071v1 1438559 4 + 3144229 TGCT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96724562 4 + 98384682 TGCT i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15650369 4 - 23502949 TGCT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169934946 4 + 171630274 TGCC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1335574 4 - 2905041 TGCT i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1300194 4 - 2164891 TGCT i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1545095 4 - 1813869 TGCT i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10977942 896 - 12073884 I e dasNov3.JH569188 624925 6033 + 760995 I e canFam3.chr1 56209248 4044 + 122678785 I e manLeu1.NW_012106474v1 8270243 824 - 10857215 M e macNem1.NW_012011000v1 8407840 335 + 10161646 I a score=24895.000000 s hg38.chr6_KB021644v2_alt 147672 3 + 185823 CAG s panTro5.chr6 173604406 3 + 175400573 CAG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171837703 3 + 173848474 CAG i panPan2.chr6 T 29 C 0 s gorGor5.CYUI01015032v1 11520774 3 - 12463322 CAG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156350912 3 + 157873769 CAG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170375473 3 + 172585720 CAG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169120806 3 - 170955103 CAG i macFas5.chr4 C 0 C 0 s cerAty1.NW_012002071v1 1438563 3 + 3144229 CAG i cerAty1.NW_012002071v1 C 0 I 4 s chlSab2.chr13 96724566 3 + 98384682 CAG i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15650373 3 - 23502949 CAG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169934950 3 + 171630274 CAG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1335578 3 - 2905041 CGG i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1300198 3 - 2164891 CAG i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1545099 3 - 1813869 CAG i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10977942 896 - 12073884 I e dasNov3.JH569188 624925 6033 + 760995 I e canFam3.chr1 56209248 4044 + 122678785 I e manLeu1.NW_012106474v1 8270243 824 - 10857215 M e macNem1.NW_012011000v1 8407840 335 + 10161646 I a score=7800.000000 s hg38.chr6_KB021644v2_alt 147675 1 + 185823 G s panTro5.chr6 173604409 1 + 175400573 G i panTro5.chr6 C 0 C 0 s panPan2.chr6 171837706 1 + 173848474 G i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11520777 1 - 12463322 G i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156350915 1 + 157873769 G i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170375476 1 + 172585720 G i rheMac8.chr4 C 0 I 183 s macFas5.chr4 169120809 1 - 170955103 G i macFas5.chr4 C 0 C 0 s chlSab2.chr13 96724569 1 + 98384682 G i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15650376 1 - 23502949 G i colAng1.NW_012114488v1 C 0 I 1 s calJac3.chr4 169934953 1 + 171630274 G i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1335581 1 - 2905041 G i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1300201 1 - 2164891 G i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1545102 1 - 1813869 G i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10977942 896 - 12073884 I e dasNov3.JH569188 624925 6033 + 760995 I e canFam3.chr1 56209248 4044 + 122678785 I e cerAty1.NW_012002071v1 1438566 4 + 3144229 I e manLeu1.NW_012106474v1 8270243 824 - 10857215 M e macNem1.NW_012011000v1 8407840 335 + 10161646 I a score=8283.000000 s hg38.chr6_KB021644v2_alt 147676 2 + 185823 -TC s panTro5.chr6 173604410 2 + 175400573 -TC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171837707 2 + 173848474 -TC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11520778 2 - 12463322 -TC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156350916 2 + 157873769 -TC i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169120810 2 - 170955103 -TC i macFas5.chr4 C 0 C 0 s chlSab2.chr13 96724570 2 + 98384682 -TC i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15650378 2 - 23502949 -CC i colAng1.NW_012114488v1 I 1 C 0 s calJac3.chr4 169934954 3 + 171630274 ATC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1335582 3 - 2905041 TCC i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1300202 3 - 2164891 TCC i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1545103 3 - 1813869 TTC i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10977942 896 - 12073884 I e dasNov3.JH569188 624925 6033 + 760995 I e canFam3.chr1 56209248 4044 + 122678785 I e cerAty1.NW_012002071v1 1438566 4 + 3144229 I e manLeu1.NW_012106474v1 8270243 824 - 10857215 M e macNem1.NW_012011000v1 8407840 335 + 10161646 I e rheMac8.chr4 170375477 183 + 172585720 I a score=220412.000000 s hg38.chr6_KB021644v2_alt 147678 44 + 185823 ACCTGCTGACAGCTGCACCTGCTCAGG-TCACCTGCTGAAAGCCG s panTro5.chr6 173604412 44 + 175400573 ACCTGGTGAAAGCCGCACCTGCTCAGG-TCACCTGCTGACAGCCG i panTro5.chr6 C 0 T 29 s panPan2.chr6 171837709 44 + 173848474 ACCTGCTGACAGTCGCACCTGCTCAGG-TCACCTGCTGAAAGCCG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11520780 44 - 12463322 ACCTGCTGACAGCCGCACCTGCTCAGG-TCACCTGCTGAAAGCCC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156350918 45 + 157873769 ACCTGCCAAAAGCTGCACCTGATCAGGCCCACCTGCTGAAAGCTG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170375660 45 + 172585720 ACCTGCTGAAAGCCACACCTGCTCAGGCCCACCTGCTGAAAGTCA i rheMac8.chr4 I 183 C 0 s macFas5.chr4 169120812 45 - 170955103 ACCTGCTGAAAGCCACACCTGCTCAGGCCCACCTGCTGAAAGTCA i macFas5.chr4 C 0 C 0 s chlSab2.chr13 96724572 44 + 98384682 ACCTGCTGAAAGCCACACCTGCTCAGGTCCA-TTGTTAAAAGCCA i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15650380 29 - 23502949 ACCTGCTGAAAGCCACACCTGCTCAGGCC---------------- i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169934957 45 + 171630274 ACCTGCTGAAAGCCACACCTGCCCAGGATCACCTGTTGAAAGCCA i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1335585 45 - 2905041 ACCTGCTGAAAGCCACACCTGCTCGGGTCCACCTGCTGAAAGCCA i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1300205 45 - 2164891 ACCTGCTGACAGCCACACCTGCTCAGGATCACCTGCAGAAAGCCA i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1545106 45 - 1813869 ACCTGATGAAAGCCGCACCTGCTCGGGTCCACCTGCTGAAAACCA i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10977942 896 - 12073884 I e dasNov3.JH569188 624925 6033 + 760995 I e canFam3.chr1 56209248 4044 + 122678785 I e cerAty1.NW_012002071v1 1438566 4 + 3144229 I e manLeu1.NW_012106474v1 8270243 824 - 10857215 M e macNem1.NW_012011000v1 8407840 335 + 10161646 I a score=61247.000000 s hg38.chr6_KB021644v2_alt 147722 11 + 185823 CACCTGTACAG s panTro5.chr6 173604427 11 + 175400573 CACCTGCTCAG i panTro5.chr6 T 29 C 0 s panPan2.chr6 171837753 11 + 173848474 CACCTGCTCAG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11520824 11 - 12463322 CACCTGCTCAG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156350963 11 + 157873769 CACCTGCTCAG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170375705 11 + 172585720 CACCTGCTCAG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169120857 11 - 170955103 CACCTGCTCAG i macFas5.chr4 C 0 C 0 s chlSab2.chr13 96724616 11 + 98384682 CACCTGCTCAG i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169935002 11 + 171630274 CACCTGTCCAG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1335630 11 - 2905041 CACCTGCTTGG i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1300250 11 - 2164891 CACCTGCTCAG i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1545151 11 - 1813869 CACCTGCTCAG i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10977942 896 - 12073884 I e dasNov3.JH569188 624925 6033 + 760995 I e colAng1.NW_012114488v1 15650409 0 - 23502949 C e canFam3.chr1 56209248 4044 + 122678785 I e cerAty1.NW_012002071v1 1438566 4 + 3144229 I e manLeu1.NW_012106474v1 8270243 824 - 10857215 M e macNem1.NW_012011000v1 8407840 335 + 10161646 I a score=69856.000000 s hg38.chr6_KB021644v2_alt 147733 10 + 185823 -GTCACCTGCT s panTro5.chr6 173604438 10 + 175400573 -GTCACCTGCT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171837764 10 + 173848474 -GTCACctgct i panPan2.chr6 C 0 T 58 s gorGor5.CYUI01015032v1 11520835 10 - 12463322 -GTCACCTGCT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156350974 10 + 157873769 -GTCACCTGCT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170375716 10 + 172585720 -GTCACCTGCT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169120868 10 - 170955103 -GTCACCTGCT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8408175 10 + 10161646 -GTCACCTGCT i macNem1.NW_012011000v1 I 335 C 0 s chlSab2.chr13 96724627 10 + 98384682 -GTCACCTGCT i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15650409 8 - 23502949 ---CACCTGCT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169935013 11 + 171630274 GATCACCTGCT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1335641 11 - 2905041 GTCCACCTGCT i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1300261 11 - 2164891 GATCACCTGCA i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1545162 11 - 1813869 GATCACCTGCT i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10977942 896 - 12073884 I e dasNov3.JH569188 624925 6033 + 760995 I e canFam3.chr1 56209248 4044 + 122678785 I e cerAty1.NW_012002071v1 1438566 4 + 3144229 I e manLeu1.NW_012106474v1 8270243 824 - 10857215 M a score=137376.000000 s hg38.chr6_KB021644v2_alt 147743 29 + 185823 GAAAG------------------------------------------------------------CCC-CACCTGCTCAGG-TCA-CCTGCT s panTro5.chr6 173604448 29 + 175400573 GACAG------------------------------------------------------------CCG-CACCTGCTCAGG-TCA-CCTGCT i panTro5.chr6 C 0 T 29 s panPan2.chr6 171837716 29 + 173848474 GACAG------------------------------------------------------------TCG-CACCTGCTCAGG-TCA-CCTGCT i panPan2.chr6 T 58 C 0 s gorGor5.CYUI01015032v1 11520845 29 - 12463322 GACAG------------------------------------------------------------CCG-CACCTGCTCAGG-TCA-CCTGCT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156350984 30 + 157873769 GAAAG------------------------------------------------------------CCG-CACCTGCTCAGGCCCA-CCTGCT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170375726 29 + 172585720 GAAAG------------------------------------------------------------CCA-CACCTGCTCAGG-TCA-CCTGCT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169120878 29 - 170955103 GAAAG------------------------------------------------------------CCA-CACCTGCTCAGG-TCA-CCTGCT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8408185 31 + 10161646 GAAAG------------------------------------------------------------CCGCCACCTGCTCAGG-TCACCCTGCT i macNem1.NW_012011000v1 C 0 C 0 s chlSab2.chr13 96724637 29 + 98384682 GAAAG------------------------------------------------------------CCA-CACCTGCTCAGG-TCC-ATTGTT i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15650417 30 - 23502949 GAAAG------------------------------------------------------------CCA-CACCTGCTCAGA-CCCAGCTGCT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169935024 30 + 171630274 GAAAG------------------------------------------------------------CCA-CACCTGCCCAGGATCA-CCTGTT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1335652 90 - 2905041 GAAAGCCATACCTGCTCAGGTCCAACTGCTGAAATCCACACCTGCTCGGGTCCACCTCCTGAAATCCA-CACCTGCTCAGGTTCA-CCTGCT i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1300272 30 - 2164891 GAAAG------------------------------------------------------------CCA-CACCTGCTCAGGATCA-CCTGCA i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1545173 30 - 1813869 GAAAA------------------------------------------------------------CCA-CACATGTTTGGGTTCA-CCTGAT i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10977942 896 - 12073884 I e dasNov3.JH569188 624925 6033 + 760995 I e canFam3.chr1 56209248 4044 + 122678785 I e cerAty1.NW_012002071v1 1438566 4 + 3144229 I e manLeu1.NW_012106474v1 8270243 824 - 10857215 M a score=149015.000000 s hg38.chr6_KB021644v2_alt 147772 19 + 185823 GAAAGCC-GCACCTGCTCAG s panTro5.chr6 173604448 19 + 175400573 GACAGCC-GCACCTGCTCAG i panTro5.chr6 T 29 C 0 s panPan2.chr6 171837745 19 + 173848474 GAAAGCC-GCACCTGCTCAG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11520874 19 - 12463322 GAAAGCC-GCACCTGCTCAG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156351014 19 + 157873769 GAAAGCC-GCACCTGCTCAG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170375755 19 + 172585720 GAAAGCC-ACACCTGCTCAG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169120907 19 - 170955103 GAAAGCC-ACACCTGCTCAG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8408216 20 + 10161646 GAAAGCCGGCACCTGCTCAG i macNem1.NW_012011000v1 C 0 C 0 s chlSab2.chr13 96724666 19 + 98384682 AAAAGCC-ACACCTGCTCAG i chlSab2.chr13 C 0 T 55 s colAng1.NW_012114488v1 15650447 19 - 23502949 GAAAGCC-ACACCTGCTCAG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169935054 19 + 171630274 GAAAGCC-ACACCTGCTCAG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1335742 19 - 2905041 GAAAGCC-ACACCTGCTCAG i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1300302 19 - 2164891 GAAAGCC-ACACCTGCTCAG i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1545203 19 - 1813869 GAAAGCC-GCACCTGCTCGG i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10977942 896 - 12073884 I e dasNov3.JH569188 624925 6033 + 760995 I e canFam3.chr1 56209248 4044 + 122678785 I e cerAty1.NW_012002071v1 1438566 4 + 3144229 I e manLeu1.NW_012106474v1 8270243 824 - 10857215 M a score=-6379.000000 s hg38.chr6_KB021644v2_alt 147791 3 + 185823 GTC- s panTro5.chr6 173604467 3 + 175400573 GTC- i panTro5.chr6 C 0 C 0 s panPan2.chr6 171837764 3 + 173848474 GTC- i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11520893 3 - 12463322 GTC- i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156351033 3 + 157873769 GTC- i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170375774 3 + 172585720 GCC- i rheMac8.chr4 C 0 I 1 s macFas5.chr4 169120926 3 - 170955103 GCC- i macFas5.chr4 C 0 I 1 s macNem1.NW_012011000v1 8408236 2 + 10161646 G-C- i macNem1.NW_012011000v1 C 0 I 1 s calJac3.chr4 169935073 4 + 171630274 GTCC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1335761 4 - 2905041 GTTC i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1300321 4 - 2164891 GATC i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1545222 4 - 1813869 GTCC i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10977942 896 - 12073884 I e dasNov3.JH569188 624925 6033 + 760995 I e colAng1.NW_012114488v1 15650466 0 - 23502949 C e canFam3.chr1 56209248 4044 + 122678785 I e chlSab2.chr13 96724685 55 + 98384682 T e cerAty1.NW_012002071v1 1438566 4 + 3144229 I e manLeu1.NW_012106474v1 8270243 824 - 10857215 M a score=26286.000000 s hg38.chr6_KB021644v2_alt 147794 4 + 185823 ACCT s panTro5.chr6 173604470 4 + 175400573 ACCT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171837767 4 + 173848474 ACct i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11520896 4 - 12463322 ACCT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156351036 4 + 157873769 ACCT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170375778 4 + 172585720 ACCT i rheMac8.chr4 I 1 C 0 s macFas5.chr4 169120930 4 - 170955103 ACCT i macFas5.chr4 I 1 C 0 s macNem1.NW_012011000v1 8408239 4 + 10161646 ACCT i macNem1.NW_012011000v1 I 1 C 0 s chlSab2.chr13 96724630 4 + 98384682 ACCT i chlSab2.chr13 T 55 C 0 s colAng1.NW_012114488v1 15650466 3 - 23502949 ACC- i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169935077 4 + 171630274 ACCT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1335765 4 - 2905041 ACCT i saiBol1.JH378287 C 0 I 430 s cebCap1.NW_016107695v1 1300325 4 - 2164891 ACCT i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1545226 4 - 1813869 ACTT i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10977942 896 - 12073884 I e dasNov3.JH569188 624925 6033 + 760995 I e canFam3.chr1 56209248 4044 + 122678785 I e cerAty1.NW_012002071v1 1438566 4 + 3144229 I e manLeu1.NW_012106474v1 8270243 824 - 10857215 M a score=17670.000000 s hg38.chr6_KB021644v2_alt 147798 3 + 185823 GCT s panTro5.chr6 173604474 3 + 175400573 GCT i panTro5.chr6 C 0 T 21 s panPan2.chr6 171837771 3 + 173848474 gct i panPan2.chr6 C 0 T 42 s gorGor5.CYUI01015032v1 11520900 3 - 12463322 GCT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156351040 3 + 157873769 TCG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170375782 3 + 172585720 GCT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169120934 3 - 170955103 GCT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8408243 3 + 10161646 GCT i macNem1.NW_012011000v1 C 0 C 0 s chlSab2.chr13 96724634 3 + 98384682 GCT i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169935081 3 + 171630274 GCT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1336199 3 - 2905041 GCT i saiBol1.JH378287 I 430 C 0 s cebCap1.NW_016107695v1 1300329 3 - 2164891 GCT i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1545230 3 - 1813869 GCT i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10977942 896 - 12073884 I e dasNov3.JH569188 624925 6033 + 760995 I e colAng1.NW_012114488v1 15650469 0 - 23502949 C e canFam3.chr1 56209248 4044 + 122678785 I e cerAty1.NW_012002071v1 1438566 4 + 3144229 I e manLeu1.NW_012106474v1 8270243 824 - 10857215 M a score=58869.000000 s hg38.chr6_KB021644v2_alt 147801 14 + 185823 GAAAGCCGC--ACCTG s gorGor5.CYUI01015032v1 11520903 14 - 12463322 GACAGCCGC--ACCTG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156351043 14 + 157873769 GAAAGCCGC--ACCTG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170375785 14 + 172585720 GAAAGCCAC--ACCTG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169120937 14 - 170955103 GAAAGCCAC--ACCTG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8408246 16 + 10161646 GAAAGGCATCACCCTG i macNem1.NW_012011000v1 C 0 C 0 s chlSab2.chr13 96724637 14 + 98384682 GAAAGCCAC--ACCTG i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169935084 14 + 171630274 GAAAGCCAC--ACCTG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1336202 14 - 2905041 GAAAGCCAC--ACCTG i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1300332 14 - 2164891 GAAAGCCAC--ACCTG i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1545233 14 - 1813869 GAAAGCCAC--ACCTG i aotNan1.NW_018494782v1 C 0 I 68 e otoGar3.GL873575 10977942 896 - 12073884 I e dasNov3.JH569188 624925 6033 + 760995 I e colAng1.NW_012114488v1 15650469 0 - 23502949 C e canFam3.chr1 56209248 4044 + 122678785 I e cerAty1.NW_012002071v1 1438566 4 + 3144229 I e manLeu1.NW_012106474v1 8270243 824 - 10857215 M e panPan2.chr6 171837774 42 + 173848474 T e panTro5.chr6 173604477 21 + 175400573 T a score=4523.000000 s hg38.chr6_KB021644v2_alt 147815 2 + 185823 TA s gorGor5.CYUI01015032v1 11520917 2 - 12463322 CT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156351057 2 + 157873769 CT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170375799 2 + 172585720 CT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169120951 2 - 170955103 CT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8408262 2 + 10161646 CT i macNem1.NW_012011000v1 C 0 C 0 s chlSab2.chr13 96724651 2 + 98384682 CT i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169935098 2 + 171630274 CC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1336216 2 - 2905041 CT i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1300346 2 - 2164891 CT i cebCap1.NW_016107695v1 C 0 C 0 e otoGar3.GL873575 10977942 896 - 12073884 I e aotNan1.NW_018494782v1 1545247 68 - 1813869 I e dasNov3.JH569188 624925 6033 + 760995 I e colAng1.NW_012114488v1 15650469 0 - 23502949 C e canFam3.chr1 56209248 4044 + 122678785 I e cerAty1.NW_012002071v1 1438566 4 + 3144229 I e manLeu1.NW_012106474v1 8270243 824 - 10857215 M e panPan2.chr6 171837774 42 + 173848474 T e panTro5.chr6 173604477 21 + 175400573 T a score=14785.000000 s hg38.chr6_KB021644v2_alt 147817 3 + 185823 CAG s panPan2.chr6 171837732 3 + 173848474 CAG i panPan2.chr6 T 42 C 0 s gorGor5.CYUI01015032v1 11520919 3 - 12463322 CAG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156351059 3 + 157873769 CAG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170375801 3 + 172585720 CAG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169120953 3 - 170955103 CAG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8408264 3 + 10161646 CAG i macNem1.NW_012011000v1 C 0 I 1 s chlSab2.chr13 96724653 3 + 98384682 CAG i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169935100 3 + 171630274 CAG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1336218 3 - 2905041 CGG i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1300348 3 - 2164891 CAG i cebCap1.NW_016107695v1 C 0 C 0 e otoGar3.GL873575 10977942 896 - 12073884 I e aotNan1.NW_018494782v1 1545247 68 - 1813869 I e dasNov3.JH569188 624925 6033 + 760995 I e colAng1.NW_012114488v1 15650469 0 - 23502949 C e canFam3.chr1 56209248 4044 + 122678785 I e cerAty1.NW_012002071v1 1438566 4 + 3144229 I e manLeu1.NW_012106474v1 8270243 824 - 10857215 M e panTro5.chr6 173604477 21 + 175400573 T a score=999.000000 s hg38.chr6_KB021644v2_alt 147820 2 + 185823 G-T s panPan2.chr6 171837735 2 + 173848474 G-T i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11520922 2 - 12463322 G-T i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156351062 3 + 157873769 GCC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170375804 2 + 172585720 G-T i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169120956 2 - 170955103 G-T i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8408268 2 + 10161646 G-C i macNem1.NW_012011000v1 I 1 C 0 s chlSab2.chr13 96724656 2 + 98384682 G-T i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8271067 2 - 10857215 G-T i manLeu1.NW_012106474v1 M 824 C 0 s calJac3.chr4 169935103 2 + 171630274 T-A i calJac3.chr4 C 0 I 1 s saiBol1.JH378287 1336221 2 - 2905041 G-T i saiBol1.JH378287 C 0 I 1 s cebCap1.NW_016107695v1 1300351 2 - 2164891 G-T i cebCap1.NW_016107695v1 C 0 I 1 e otoGar3.GL873575 10977942 896 - 12073884 I e aotNan1.NW_018494782v1 1545247 68 - 1813869 I e dasNov3.JH569188 624925 6033 + 760995 I e colAng1.NW_012114488v1 15650469 0 - 23502949 C e canFam3.chr1 56209248 4044 + 122678785 I e cerAty1.NW_012002071v1 1438566 4 + 3144229 I e panTro5.chr6 173604477 21 + 175400573 T a score=117889.000000 s hg38.chr6_KB021644v2_alt 147822 16 + 185823 CACCTGCTGAAAGCCC s panPan2.chr6 171837737 16 + 173848474 CACCTGCTGAAAGCCG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11520924 16 - 12463322 CACCTGTTGAAAGCCG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156351065 16 + 157873769 CACCTGCTGAAAGCCG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170375806 16 + 172585720 CACCTGCTGAAAGCCA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169120958 16 - 170955103 CACCTGCTGAAAGCCA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8408270 16 + 10161646 CACCTGCTGAAAGCCA i macNem1.NW_012011000v1 C 0 C 0 s chlSab2.chr13 96724658 16 + 98384682 CCATTGTTAAAAGCCA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8271069 16 - 10857215 CACCTGCTGAAAGCCA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15650469 16 - 23502949 CACCTGCTGAAAGCCA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169935106 16 + 171630274 CACCTGCTGAAAGCCA i calJac3.chr4 I 1 C 0 s saiBol1.JH378287 1336224 16 - 2905041 cacctgctgaaagcca i saiBol1.JH378287 I 1 C 0 s cebCap1.NW_016107695v1 1300354 16 - 2164891 CACCTCCTGAAAGCCA i cebCap1.NW_016107695v1 I 1 C 0 s aotNan1.NW_018494782v1 1545315 16 - 1813869 CACCTGCTGAAAGCCG i aotNan1.NW_018494782v1 I 68 C 0 e otoGar3.GL873575 10977942 896 - 12073884 I e dasNov3.JH569188 624925 6033 + 760995 I e canFam3.chr1 56209248 4044 + 122678785 I e cerAty1.NW_012002071v1 1438566 4 + 3144229 I e panTro5.chr6 173604477 21 + 175400573 T a score=10500.000000 s hg38.chr6_KB021644v2_alt 147838 1 + 185823 C s panTro5.chr6 173604456 1 + 175400573 C i panTro5.chr6 T 21 C 0 s panPan2.chr6 171837753 1 + 173848474 C i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11520940 1 - 12463322 C i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156351081 1 + 157873769 C i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170375822 1 + 172585720 C i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169120974 1 - 170955103 C i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8408286 1 + 10161646 C i macNem1.NW_012011000v1 C 0 C 0 s chlSab2.chr13 96724674 1 + 98384682 C i chlSab2.chr13 C 0 I 10 s manLeu1.NW_012106474v1 8271085 1 - 10857215 C i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15650485 1 - 23502949 C i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169935122 1 + 171630274 C i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1336240 1 - 2905041 c i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1300370 1 - 2164891 C i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1545331 1 - 1813869 C i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10977942 896 - 12073884 I e dasNov3.JH569188 624925 6033 + 760995 I e canFam3.chr1 56209248 4044 + 122678785 I e cerAty1.NW_012002071v1 1438566 4 + 3144229 I a score=101351.000000 s hg38.chr6_KB021644v2_alt 147839 13 + 185823 ACCTGCTCAGGTC s panTro5.chr6 173604457 13 + 175400573 ACCTGCTCAGGTC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171837754 13 + 173848474 ACCTGCTCAGGTC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11520941 13 - 12463322 ACCTGCTCAGGTC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156351082 13 + 157873769 ACCTGCTCAGGTC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170375823 13 + 172585720 ACCTGCTCAGGTC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169120975 13 - 170955103 ACCTGCTCAGGTC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8408287 13 + 10161646 ACCTGCTCAGGCC i macNem1.NW_012011000v1 C 0 C 0 s chlSab2.chr13 96724685 3 + 98384682 ----------ACC i chlSab2.chr13 I 10 I 1 s manLeu1.NW_012106474v1 8271086 13 - 10857215 ACctgctcagacc i manLeu1.NW_012106474v1 C 0 I 1 s colAng1.NW_012114488v1 15650486 13 - 23502949 ACctgctcaggcc i colAng1.NW_012114488v1 C 0 I 1 s calJac3.chr4 169935123 13 + 171630274 ACCTGCTCAGGTC i calJac3.chr4 C 0 I 1 s saiBol1.JH378287 1336241 13 - 2905041 acctgctcgggtc i saiBol1.JH378287 C 0 I 1 s cebCap1.NW_016107695v1 1300371 13 - 2164891 ACCTGCTCGGGTC i cebCap1.NW_016107695v1 C 0 I 1 s aotNan1.NW_018494782v1 1545332 13 - 1813869 ACCTGCTCGGGTC i aotNan1.NW_018494782v1 C 0 I 70 e otoGar3.GL873575 10977942 896 - 12073884 I e dasNov3.JH569188 624925 6033 + 760995 I e canFam3.chr1 56209248 4044 + 122678785 I e cerAty1.NW_012002071v1 1438566 4 + 3144229 I a score=31542.000000 s hg38.chr6_KB021644v2_alt 147852 4 + 185823 A---Cct s panTro5.chr6 173604470 4 + 175400573 A---CCT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171837767 4 + 173848474 A---Cct i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11520954 4 - 12463322 A---CCT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156351095 4 + 157873769 A---CCT i nomLeu3.chr3 C 0 M 509 s rheMac8.chr4 170375836 4 + 172585720 A---CCT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169120988 4 - 170955103 A---CCT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8408300 7 + 10161646 ACCCCCT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1438570 4 + 3144229 A---CCT i cerAty1.NW_012002071v1 I 4 C 0 s chlSab2.chr13 96724689 4 + 98384682 G---CCT i chlSab2.chr13 I 1 C 0 s manLeu1.NW_012106474v1 8271100 4 - 10857215 a---cct i manLeu1.NW_012106474v1 I 1 C 0 s colAng1.NW_012114488v1 15650500 4 - 23502949 a---cct i colAng1.NW_012114488v1 I 1 C 0 s calJac3.chr4 169935137 4 + 171630274 A---CCT i calJac3.chr4 I 1 C 0 s saiBol1.JH378287 1336255 4 - 2905041 a---cct i saiBol1.JH378287 I 1 C 0 s cebCap1.NW_016107695v1 1300385 4 - 2164891 A---CCT i cebCap1.NW_016107695v1 I 1 C 0 e otoGar3.GL873575 10977942 896 - 12073884 I e aotNan1.NW_018494782v1 1545345 70 - 1813869 I e dasNov3.JH569188 624925 6033 + 760995 I e canFam3.chr1 56209248 4044 + 122678785 I a score=16851.000000 s hg38.chr6_KB021644v2_alt 147856 3 + 185823 gct s panTro5.chr6 173604474 3 + 175400573 GCT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171837771 3 + 173848474 gct i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11520958 3 - 12463322 GCT i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170375840 3 + 172585720 GCA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169120992 3 - 170955103 GCA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8408307 3 + 10161646 GCA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1438574 3 + 3144229 GCA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96724693 3 + 98384682 GCA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8271104 3 - 10857215 gca i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15650504 3 - 23502949 gca i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169935141 3 + 171630274 GCT i calJac3.chr4 C 0 I 239 s saiBol1.JH378287 1336259 3 - 2905041 gca i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1300389 3 - 2164891 GCA i cebCap1.NW_016107695v1 C 0 C 0 e otoGar3.GL873575 10977942 896 - 12073884 I e aotNan1.NW_018494782v1 1545345 70 - 1813869 I e dasNov3.JH569188 624925 6033 + 760995 I e canFam3.chr1 56209248 4044 + 122678785 I e nomLeu3.chr3 156351099 509 + 157873769 M a score=179343.000000 s hg38.chr6_KB021644v2_alt 147859 29 + 185823 tcctgtgctgcaggaagacagagggggct s panTro5.chr6 173604477 29 + 175400573 TCCTGTgctgcaggaagacagagggggct i panTro5.chr6 C 0 C 0 s panPan2.chr6 171837774 29 + 173848474 tcctgtgctgcaggaagacagagggggct i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11520961 29 - 12463322 TCCTGTgctgcaggaagacagagggggct i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170375843 29 + 172585720 CCCTGTGCTGCAGGAAGACAGAGGGGGCG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169120995 29 - 170955103 CCCTGTGCTGCAGGAAGACAGAGGGGGCG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8408310 29 + 10161646 CCCTGTGCTGCAGGAAGACAGAGGGGGCG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1438577 29 + 3144229 TCCTGTgcagcaggaagacagagggggct i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96724696 29 + 98384682 TCCTGTGCTGCAGGAAGACAGAGGGGGCT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8271107 29 - 10857215 tcctgtgcagcaggaagacagagggggct i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15650507 29 - 23502949 ttctgtgctgcaggaagacagagggggct i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169935383 23 + 171630274 TTCTGT------GGAAGACAGGTGGGGCT i calJac3.chr4 I 239 C 0 s saiBol1.JH378287 1336262 23 - 2905041 ttctgt------ggaagacaggtggggct i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1300392 23 - 2164891 TTCTGT------GGAAGACAGGTTGggtt i cebCap1.NW_016107695v1 C 0 C 0 e otoGar3.GL873575 10977942 896 - 12073884 I e aotNan1.NW_018494782v1 1545345 70 - 1813869 I e dasNov3.JH569188 624925 6033 + 760995 I e canFam3.chr1 56209248 4044 + 122678785 I e nomLeu3.chr3 156351099 509 + 157873769 M a score=273824.000000 s hg38.chr6_KB021644v2_alt 147888 38 + 185823 tctactttcatccg-ccttccacatgccatgcagtgcat s panTro5.chr6 173604506 39 + 175400573 tctactttcacccggccttccacatgccatgcagtgcat i panTro5.chr6 C 0 C 0 s panPan2.chr6 171837803 39 + 173848474 tctactttcacccggccttccacatgccatgcagtgcat i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11520990 39 - 12463322 tctactttcatccggccttccacatgccatgcagtgcat i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156351612 38 + 157873769 TTTACTTTCATCCA-GCTTCCACGTGCCGTGCAGCGCAT i nomLeu3.chr3 M 509 C 0 s rheMac8.chr4 170375872 39 + 172585720 TCTACTTTCATCCGGCCTTCCACATGCCATGCAGTGCAT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169121024 39 - 170955103 TCCACTTTCATCCGGCCTTCCACATGCCATGCAGTGCAT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8408339 38 + 10161646 TCCATTTCATTTCGGCCTTCCA-ATGCCATGCAGTGCAT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1438606 39 + 3144229 tctactttcatccggccttccacatgccatgcagtgcat i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96724725 38 + 98384682 TCTGCtc-catccagccttccacatgccatgcagtgcat i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8271136 39 - 10857215 tctactctcatccggccttccacatgccatgcagtgcat i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15650536 39 - 23502949 tctgctttcatccggccttccacatgccatgcagtgcat i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169935406 39 + 171630274 CCTGTTTTCATCCAGCCTTTACAATGCCATGCAGCACAA i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1336285 39 - 2905041 cccgctttcatccagcctttaaaatgccatgcagcacaa i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1300415 39 - 2164891 cctgctttcatccagcctttaaaatgccatgcagcacaa i cebCap1.NW_016107695v1 C 0 C 0 e otoGar3.GL873575 10977942 896 - 12073884 I e aotNan1.NW_018494782v1 1545345 70 - 1813869 I e dasNov3.JH569188 624925 6033 + 760995 I e canFam3.chr1 56209248 4044 + 122678785 I a score=674115.000000 s hg38.chr6_KB021644v2_alt 147926 71 + 185823 ctcattcatgggttctt-attgccatccacaatctgccggcaa-ggaaatttggaaagtctccccaggtttac s panTro5.chr6 173604545 71 + 175400573 ctcattcatgggttctt-actgccatccacaatctgccggcaa-ggaaatttggaaagtCTCCCCAGGTTTAC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171837842 71 + 173848474 ctcattcatgggttctt-attgccatccacaatctgccggcaa-ggaaatttggaaagtctccccaggtttac i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11521029 71 - 12463322 ctcattcatgggttctt-attgccatccacaatctgccggcaa-ggaaatttggaaagtCTCCCCAGGTTTAC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156351650 71 + 157873769 CTCATCCGTGGGTTCTT-ATTGCCATCCACAATCTGCCAGCAA-GGACATTTGGAAAGTCTCCCCAGGTTTAC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170375911 71 + 172585720 CTCACCCATAGGTTCTT-AATGCCATCCACAATCTGCTGACAA-GGAAATCTGGAAAGTCTCCCCAGGTTTAC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169121063 71 - 170955103 CTCACCCATAGGTTCTT-AATGCCATCCACAATCTGCTGACAA-GGAAATCTGGAAAGTCTCCCCAGGTTTAC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8408377 73 + 10161646 CTCACCCACAGGTTCTTCAATGCCATCCACAATCTGCTGACAACGGAAAATCTGAAAGGCTCCCCAGGTTTAC i macNem1.NW_012011000v1 C 0 I 330 s cerAty1.NW_012002071v1 1438645 71 + 3144229 ctcacccataggttctt-aatgccatccacaatctgctgacaa-ggaaatctgggaagtctccccaggtttac i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96724763 71 + 98384682 ctcatccatAGGTTCTT-AATGCCATCCACAATCTGCTGACAA-GGAAATCTGGAAAGTCTCCCCAGGTTTAC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8271175 71 - 10857215 ctcatccataggttctt-aatgccatccacaatctgctgacaa-ggaaatctggaaagtctccccaggtttac i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15650575 71 - 23502949 ctcatccataggttctt-aatgccatccacaatctgctgacaa-ggaaatctggaaagtctccccaggtttac i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169935445 71 + 171630274 CTCATTCACAGGTTCTT-AATGCCATACAGAATCTGCTGGCCA-GGAAATCTGGAAAGTTTCCCCAGATTTAC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1336324 71 - 2905041 ctcattcacaggttctt-accgccatccagaatctgctggcca-ggaaatctggaaagtttccccaggtttac i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1300454 71 - 2164891 ctcattcacaggttctt-aatgccacccagaatctgctggcca-gaaaatctggaaagtttccccaggtttac i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1545415 71 - 1813869 ctcattcacaggttctt-gatgccatccagaatctgctggcca-ggaaatctggaaagtttccccaggtttac i aotNan1.NW_018494782v1 I 70 C 0 e otoGar3.GL873575 10977942 896 - 12073884 I e dasNov3.JH569188 624925 6033 + 760995 I e canFam3.chr1 56209248 4044 + 122678785 I a score=1016074.000000 s hg38.chr6_KB021644v2_alt 147997 138 + 185823 atctgtgtgatctaaggggaagcACGAGTCCTGCCGGAGAACTGAGCCCCAGCTCCCTAAGCCACTTGTGTCTTTCCACTCCCTACCCCA-GTTGGTGCAGGGTTGTGTTTGTCAGTTGTGGAATGGGTGTCCTGGGAG s panTro5.chr6 173604616 138 + 175400573 ATCTGTGTGATCTAAGGGGAAGCACCAGTACTGCCGGAGAACTGAGCCCCAGCTCCCTAAGCCACTTGTGTCTTTCCACTCCCTACCCCA-GTTGGTGCAGGGTCGTGTTTGTCAGTTGTGGAATGGGTGTCCTGGGAG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171837913 138 + 173848474 atctgtgtgatctaaggggaagcACCAGTACTGCCGGAGAACTGAGCCCCAGCTCCCTAAGCCACTTGTGTCTTTCCACTCCCTACCCCA-GTTGGTGCAGGGTCGTGTTTGTCAGTTGTGGAATGGGTGTCCTGGGAG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11521100 138 - 12463322 ATCTGTGTGATCTCAGGGGAAGCACCAGTCCTGCCGGAGAACTGAGCCCCAGCTCCCTAAGCCACTTGTGTCTTTCCACTCCCTACCCCA-GTTGGTGCAGGGTCGTGTTTGTCAGTTGTGGAATGGGTGTCCTGGGAG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156351721 138 + 157873769 ATCTGTGTGATCTAAGGGGAAGCACCAGTCCTGCTGGAGAGCTGAGTCCCAGCTCCCTAAGCCACTTGTGTCTTTCCACTCCCTATCCCA-GTTGGTGCAGAGGCATGTCTGTCAGTTGTGGAATGGGTGTCCTGGGAG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170375982 137 + 172585720 GTCTGTGTGATCCAAGGGGAAGTGCTAGTCCTGCCAGAGAACTGAGCCCCAGCTCCCTAAGCC-CCTGTGTCTTTCCACTCCCTATCCCA-CGTTGTTCAGAAGCGTGTTTGTTAGTTGGGGAATGGGTGTCCTGGGAG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169121134 137 - 170955103 GTCTGTGTGATCCAAGGGGAAGTGCTAGTCCCGCCAGAGAACTGAGCCCCAGCTCCCTAAGCC-CCTGTGTCTTTCCACTCCCTATCCCA-CATTGTTCAGAAGCGTGTTTGTTAGTTGGGGAATGGGTGTCCTGGGAG i macFas5.chr4 C 0 C 0 s cerAty1.NW_012002071v1 1438716 135 + 3144229 gtctgtgtgatccaaggggaagTGCCAGTCCTGCCGGGGAACTGAGCCCCAGCTCCCTAG--C-CCTGTGTCTTTCCACTCCCTGTCCCA-GGTTGTTCAGAAGCGTGTTTGTCAGTTGGGGAATGGGTGTCCTGGGAG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96724834 137 + 98384682 GTCTGTGTGATCCAAGGGGAAGTGCCAGTCCTGCCAGAGAACTGAGCCCCAGCTCCCTAAGCC-CCTGTGTCTTTCCACTCCCTATCCCA-GGTTGTTCAGAAGTGTGTTTGTCCGTTGGGGAATGGGTGTCCTGGGAG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8271246 137 - 10857215 gtctgtgtgatccaaggggaagTGCCAGTCCTGTCGGGGAACTGAGCCCCAGCTCCCTAAGCC-CCTGTGTCTTTCCACTCCCTGTCCCA-GGTGGTGCAGAAGCGTGTTTGTCAGTTGGGGAATGGGTGTCCTGGGAG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15650646 137 - 23502949 atctgtgtgatccaaggggaagTGCCAGTCCTGCCGGAGAACTGAGCCCCAGCTTCCTAAGCC-GCTGTGTCTTTCCACTCCCTATCCCA-GGTGGTGCAGAGGCGTGTTTGTCAGTTGGGGAATGGGTGTCCTGGGAG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169935516 137 + 171630274 AGCTGTGTGATCCAAAGGGGC-TGCCAGTCCTGCCGGAGAACTGAGCCCCAGCGCCCTAAGGCACCCACGTCTTTCCACTCGTTCTCCCA-GGTGGCACAGATGCATGTGTGTCAATTGTAGAATGGGTGTCCTGGGAG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1336395 137 - 2905041 agctgtgtgatccgaagggaC-TGCCGGTCCTGCCGGAGAACTGAGCCCCAGCGCCCTAGGGCACCTGCGTCTTTCCACTCGTTCTCCCAGGGTGGCGCAGATGCATGCGT-TCAAGTGTAGAATGGGTGTCCTGGGAG i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1300525 137 - 2164891 agctctgtgatccaaaggGAC-TGCCAGTCCTGCTGGAGAACTGAGCCCCAGAGCCCTAGGGCACCCGCGTCTTTCCACTGGTTCTCCCA-GGTGGCGCAGATGCGTGTGTGTCAGTTGTAGAATGGGTGTCCTGGGAG i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1545486 137 - 1813869 agctgtgtgatccaaaggGAC-TGCCGGTCCTGCCGGAGAACTGAGCCCCAGCGCCCTAAGGCACCCGCATCTTTCCACTCGTTCTCCCA-GGTGGCGCAGATGCGTGTGTGTCAATTGTAAAATGGGTGTCCTGGGAG i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10977942 896 - 12073884 I e dasNov3.JH569188 624925 6033 + 760995 I e canFam3.chr1 56209248 4044 + 122678785 I e macNem1.NW_012011000v1 8408450 330 + 10161646 I a score=739407.000000 s hg38.chr6_KB021644v2_alt 148135 108 + 185823 GCACAGTGT--TGTTTTAGTGCTGAGGGGACTGCCCCCTCTTTCACTAGCAAATGTTTaggcaacatcgtaagcgtttctcatgcaacagcccattaatgttcacatgaa s panTro5.chr6 173604754 107 + 175400573 GCACGGTGT--TGTTTTAGTGCTGAGGG-ACTGCCCCCTCTTTCACTAGCAGATGTTTaggcaacatcgtaagcgtttctcatgcaacagcccattaatgctcacatgaa i panTro5.chr6 C 0 C 0 s panPan2.chr6 171838051 107 + 173848474 GCACGGTGT--TGTTTTAGTGCTGAGGG-ACTGCCCCCTCTTTCACTAGCAGATGTTTaggcaacatcataagcgtttctcatgcaacagcccattaatgctcacatgaa i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11521238 108 - 12463322 GCACGGTGT--TGTTTTAGTGCTGAGGGGACTGCACCCTCTTTCACTAGCAAATGTTTAGGCAACATCGTAAGCGTTTCTCATTCAACAGCCCATTAATGCTCACATGAA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156351859 108 + 157873769 GCACAGTGT--TGTTTTAGTGCTAGGGGGACTGCCCCCTCTTTCATTAGCAAatgtttaggcaacatcgtaagcgtttctcttgcaacagcccattaatgctcacatgaa i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170376119 108 + 172585720 GCACAGTGC--TGTTTTAATGCTGAGGGGACTGCCCCCTCTTTCATTAGCAAATGTTTAAGCAACATTGtaaacatttttcatgcaataacccattaatgctcacataag i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169121271 108 - 170955103 GCACAGTGC--TGTTTTAATGCTGAGGGGACTGCCCCCTCTTTCATTAGCAAatgtttaagcaacattgtaaacatttttcatgcaataacccattaatgctcacataag i macFas5.chr4 C 0 C 0 s cerAty1.NW_012002071v1 1438851 108 + 3144229 GCACAGTGT--TGTTTTAATGCTGGGGGGACTGCCCCCTCTTTCATTAGCAAATGTTTAAGCAACATTGtaaacgtttttcgtgcaataacccattaatgctcacataag i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96724971 108 + 98384682 GCACAGTGG--TGTTTTAATGCTGAGGGGACTGCCCCCTCTTTCATTAGCAAATGTTTAAGCAACATTGTAAACATTTTTCATGCAATAACCCATTAATGCTCACATAAG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8271383 108 - 10857215 GCACAGTGC--TGTTTTAATGCTGGGGGGACTGCCCCCTCTTTCATTAGCAAATGTTTAAGCAACATTGtaaacatttttcgtgcaataacccattaatgctcacataag i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15650783 108 - 23502949 GCACAGTGT--TGTTTTAATGCTGGGGGAACTGCCCCCTCTTTCATTAGCAAATGTTTAAGCAACATTGtaaacatctttcgtgcaataacccattaatgctcacatgag i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169935653 110 + 171630274 GCATGGTGTTCTGTTTTATTGCTGGGGAGACTGCCCCCTCTTTCATTAGCAAATATTTaggcaacattataagaatttctcatgcaacatctcattaatgctcacgtgag i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1336532 108 - 2905041 GCATGGTGTTCTGTTTTACTGCTGGGGAGACTGCCCCCTC--TCATTAGCAAATGgttaggcaacagtataagaatttctcatgcaacatctcattaatgctcacgtgag i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1300662 110 - 2164891 GCATGGTGTTCTGTTTTACTGCTGGGGAGACTGCCCCCTCTTTCATTAGCAAATGTTTaggcaacattataagaatttctcatgcagcatctcattgttgctcacgtgaa i cebCap1.NW_016107695v1 C 0 C 0 e otoGar3.GL873575 10977942 896 - 12073884 I e aotNan1.NW_018494782v1 1545623 0 - 1813869 C e dasNov3.JH569188 624925 6033 + 760995 I e canFam3.chr1 56209248 4044 + 122678785 I e macNem1.NW_012011000v1 8408450 330 + 10161646 I a score=1023389.000000 s hg38.chr6_KB021644v2_alt 148243 129 + 185823 cctgattatgtaatgacttagtgacaaggattttctattacaaacaggaagagggggcttcagaggtgaaggccctgcctgagagcacaggactgctaagtctgggcagatggaagcaggatgagccca s panTro5.chr6 173604861 129 + 175400573 cctgattatgtaatgacttagtgacaaggattttctattacaaacaggaagagggggctccagaggtgaaggccctgcctgagagcacaggactgctaagtctgggcagatggacgcaggatgagccca i panTro5.chr6 C 0 C 0 s panPan2.chr6 171838158 129 + 173848474 cctgattatgtaatgacttagtgacaaggattttctattacaaacaggaagagggggctccagaggtgaaggccctgcctgagagcacaggactgctaagtctgggcagatggacgcaggatgagccca i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11521346 129 - 12463322 CCTGATTATGTAATGACTTAGTGACAAGGATTTTCTATTACAAACAGGAAGAGGGGGCTCCAGAGGTGAAGGCCCTGCCTGAGAGCACAGGACTGCTAAGTCTGGGCAGATGGAAGCAGGATGAGCCCA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156351967 129 + 157873769 cctgattatgtaatgacttagtgacaaggattttctattacaagcaggaagagggggctccagaggtgaaggccctgcctgagagcacaggactgctaagtctgggtggacggaagcaggatgagcccg i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170376227 129 + 172585720 cccgattatgtaatgaattagtgacaaagattttctattacaaacaggaagtgggggctccagaggtgaaggccctgcctgagagcacaggactgctaagtctgggcagatggaagcagggtcagcccg i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169121379 129 - 170955103 cccgattatgtaatgaattagtgacaaagattttctattacaaacaggaagtgggggctccagaggtgaaggccctgcctgagagcacaggactgctaagtctgggcagaTGGAAGCAGGGTCAGCCCA i macFas5.chr4 C 0 C 0 s cerAty1.NW_012002071v1 1438959 129 + 3144229 cccgattatgtaatgaattagtgacaaagattttctattacaaacaggaagtgggggctccagaggtgaaggccctgcctgagagcacaggactgctaagtctgggcagatggaagcaggctcagcccg i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96725079 129 + 98384682 CCCGATTATGTAATGAGTTAGTGACAAAGATTTTCTATTACAAACAGGAAGTGGGGGCTCCAGAGGGGAAGGCCCTGCCTGAGAGCACAGGACTGCTAAGTCTGGGCAGATGGAAGCAGGCTCAGCCCG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8271491 129 - 10857215 cccgattatgtgatgaattagtgacaaagattttctattacaaacaggaagtgggggctccagaggtgaaggccctgcctgagagcacaggactgctaagtctgggcagatggaagcaggctcagcccg i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15650891 128 - 23502949 cccaattatgtaatgaattagtgacaaagattttctattacaaacaggaagggggtgctccagaggcgaaggccctgcctgagaacacaggaccgctaagtctgagcagatggaagcagggtcagtgg- i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169935763 116 + 171630274 cctggtgatgtaatgaattagtaacaagggttttctattacaaacaggaagcagaggctcTCGAGGTG-------------AGAGCACAGGACGGCCAAGTCTGGATGCAGAGGGCCAGGGTCAGCCTG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1336640 129 - 2905041 cctgatgatgtaatgaattagtaacaagggtttcccattacaaacaggaaggggaggctcccgaggtgaaggctctgccaaagagcacaggacggctaagtctggacagacaggtccagggtcagcctg i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1300772 129 - 2164891 cctgatgatgtaatgaattagtaataagggttttccattacaaacaggaaggagagaatcctgaggtgaaggctctgccagagagcacaggacagctaagtctggacagacagggccagggtcagcctg i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1545623 129 - 1813869 CCTGATGATGTAATGAATTAGTAACAAGGGTTTTCTATTACAAACAGGAAGGGGAGGCTCCCGAGGTGAAGGCTCTGCCTGAGAGCACAGGATGGCTAAGTCTGGACAGACAGGGCCAGGGTCAGCCTG i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10977942 896 - 12073884 I e dasNov3.JH569188 624925 6033 + 760995 I e canFam3.chr1 56209248 4044 + 122678785 I e macNem1.NW_012011000v1 8408450 330 + 10161646 I a score=1118720.000000 s hg38.chr6_KB021644v2_alt 148372 127 + 185823 CGGGACCTTTGCATCTAACCACTGCACGAAGCCCGGCCCTCCAAGAGTGGTGACTTGGGGAGACACCCCAGTGTGGTAGACCCCATGACAGAACCAGAGGAGAGTGGGAAACACCATGTTTGCCAGC s panTro5.chr6 173604990 127 + 175400573 CGGGACCTTTGCATCTAACCACTGCACGAAGCCCTGCCCTCCAAGAGTGGTGACTTGGGGAGACACCCCAGTGTGGTAGACCCCATGACAGAACCAGAGGAGAGTGGGAAACACCATGTTTGCCAGC i panTro5.chr6 C 0 I 148 s panPan2.chr6 171838287 127 + 173848474 CGGGACCTTTGCATCTAACCACTGCACGAAGCCCTGCCCTCCAAGAGTGGTGACTTGGGGAGACACCCCAGTGTGGTAGACCCCATGACAGAACCAGAGGAGAGTGGGAAACACCATGTTTGCCAGC i panPan2.chr6 C 0 I 148 s gorGor5.CYUI01015032v1 11521475 127 - 12463322 CGGGACCCTTGCATCTAACCACTGCACGAAGCCCTGCCCTCCAAGAGTGGTGACTCGGGGAGACACCCAAGTGTGGTAGACCCCATGACAGAACCAGAGGAGAGTGGGAAACACCATGTTTGCCAGC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156352096 127 + 157873769 cagggcccttgcatctaaccactGCACGAAGCCCTGTCCTCCAAGAGTGGTGACTTGGGGAGACACTCAAGTGTGGTAGACCCCATGAGAGAACCAGAGGAGAGTGGGAAACACCATGTTTGCCAAC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170376356 127 + 172585720 cgggacccttgcttctaaccactgcacaaagccctgccctccAAGAGTGGTGACTTGGGGAGACACCTGAGTGTGGTGGACCCCAGGGGAGATCCAGAGGAGAGTGGGAAACGCCATGTCTGCCAAC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169121508 127 - 170955103 CGGGACCCTTGCATCTAACCACTGCACAAAGCCCTGCCCTCCAAGAGTGGTGACTTGGGGAGACACCTGAGTGTGGTGGACCCCAGGGGAGATCCAGAGGAGAGTGGGAAACGCCATATCTGCCAAC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8408780 127 + 10161646 CGGGACCCTTGCATCTAACCACTGCACAAAGCCCTGCCCTCCAAGAGTGGTGACTTGGGGAGACACCTGAGTGTGGTGGACCCCAGGGGAGATCCAGAGGAGAGTGGGAAACGCCATGTCTGCCAAC i macNem1.NW_012011000v1 I 330 C 0 s cerAty1.NW_012002071v1 1439088 127 + 3144229 cgggacccttgcatctaaccactgcacaaagccctgccctccAAGAGTGGTGACTTGGGGAGACACCTGAGTGTGGTGGGCCCCAGGGGAGATCCAGAGGAGAGTGGGAAATGCCATGTCTGCCAAC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96725208 127 + 98384682 CAGGACCCTTGCATCTAACCACTGCACAAAGCCCTGCCCTCCAAGAGTGGTGACTTGGGGAGACATCTGAATGTGGTGGACCCCAGGGGAGATCCAGAGGAGAGTGGGAAATGCCATGTCTGCCAAC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8271620 127 - 10857215 cgggacccttgcatctaaccactgcacaaagccctgccctccAAGAGTGGTGACTTGGGGAGACACCTGAGTGTGGTGGGCCCCAGGGGAGATCCAGAGGAGAGTGGGAAACGCCATGTCTGCCAAC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15651019 127 - 23502949 caggaccattgcatctaaccactgcacaaagccctgccctccAAGAGTGGTGACTTGGGGAGACACCTGAGTGTGGTGGACTCCAGGAAAGATCCAGAGGAGAGTGGGAAACGCCATGTCTGCCAAC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169935879 116 + 171630274 CAGGACTCTTGCATCTGACCACTGCATGAATCCCTGCCCTCCAAGAGTGGTGACCTGGGGGGACACCCAAGTGTGCGACAGC-----------CCAGAGGAGAGTGGGGAACATGGTGTTCACCAAC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1336769 116 - 2905041 tgggactcttgcatctaaccactacatgaatccctgccctccAAGAGCGGTGACCTGGGGAGACACCTGAGTGTGGGACAGC-----------CCAAAGGAGAGTGGGGAACATGGTGTTCACCAAC i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1300901 116 - 2164891 cgggactcttgcatctaaccactgcatgaatccctgccctccAAGAGTGGTGACCTGGGGAGACACCGGAGTGTGGGACAGC-----------CCAGAGGAGAGTGGGGAACACGGTGTTCGCCAAC i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1545752 115 - 1813869 CGGGACTCTTGCATCTAACCACTGCATGAAGCCCTGCCCTCCAAGATTGGTGA-CTGGGGAGATACCTGAGTGTGGGACAGC-----------CCAGAGGAGAGTGGGGAACCTGGTGTTCGCCAAC i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10977942 896 - 12073884 I e dasNov3.JH569188 624925 6033 + 760995 I e canFam3.chr1 56209248 4044 + 122678785 I a score=729859.000000 s hg38.chr6_KB021644v2_alt 148499 89 + 185823 CATGAGGAGCCATCCAGAGAATAATGGCGGCT--------------------------------------------------------------------------CCCCAGGACAGAGACGTGCACACTGGAGCCGCCGGGCACCGTGAGCTCTGCTTTCGA s panTro5.chr6 173605265 89 + 175400573 CATGAGGAACCATCCAGAGAATAATGGCGGCT--------------------------------------------------------------------------CCCCAGGACAGAGACGTGCACACTGGAGCCGCCGGGCACCGTGAGCTCTGCTTTCGA i panTro5.chr6 I 148 C 0 s panPan2.chr6 171838562 89 + 173848474 CATGAGGAACCATCCAGAGAATAATGGCGGCT--------------------------------------------------------------------------CCCCAGGACAGAGACGTGCACACTGGAGCCGCCGGGCACCGTGAGCTCTGCTTTCGA i panPan2.chr6 I 148 C 0 s gorGor5.CYUI01015032v1 11521602 163 - 12463322 CATGAGGAACCACCCAGAGAATAATGGCGGCTCCCCAGGACAGAGACGTGCACACTGGAGCTGCCGGGCACCGTCATGAGGAACCATCCAGAGAATAACGGCGGCTCCCCAGGACAGAGACGTGCACACTGGAGCCGCCGGGCACCGTGAGCTCTGCTTTCGA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156352223 89 + 157873769 CAGGAGGAACCATCCAGTGAACAACGGCGGCT--------------------------------------------------------------------------CCCCAGGACAGAGACGTGCACACAGGAGCCGCTGGGCACCGTGAGCTCTGCTGTCCT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170376483 89 + 172585720 CATGAGGAACCATCCAGTGACTACAGGCAGCT--------------------------------------------------------------------------CCCCAGGACAGAGACGTGCGCACAGGAGCCGCCAGGCACCGTGAACTCTGCTTTCGT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169121635 89 - 170955103 CATGAGGAACCATCCAGTGACTACAGGCAGCT--------------------------------------------------------------------------CCCCAGGACAGAGACGTGCGCACAGGAGCCGCCAGGCACCGTGAACTCTGCTTTCGT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8408907 89 + 10161646 CATGAGGAACCATCCAGTGACTACAGGCAGCT--------------------------------------------------------------------------CCCCAGGACAGAGACGTGCGCACAGGAGCCGCCAGGCACCGTGAGCTCTGCTTTCGT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1439215 89 + 3144229 CACGAGGAACCATCCAGTGAATACAGGCAGCT--------------------------------------------------------------------------CCCCAGGACAGAGATGTGCACACAGGAGCCGCCGGGCACCGTGAGCTCTGCTTTCGT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96725335 89 + 98384682 CACGAGGAACCATCCAGTGAATACAGGCAGCT--------------------------------------------------------------------------CCCCAGGACGGAGACGTGCGCACAGGAGCCGCCAGGCACCGTGAACTCTGCTTTCGT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8271747 89 - 10857215 CACGAGGAACCATCCAGTGAATACAGGCAGCT--------------------------------------------------------------------------CCCCAGGACAGAGATGTGCACACAGGAGCCGCCGGGCACCGTGAGATCTGCTTTCGT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15651146 89 - 23502949 CACGAGGAACCATCCAGTGAATACAGGCAGCT--------------------------------------------------------------------------CCCCAGGACAGAGACGTGCACACAGGAGCCGCCGGGCACCGTGAGCTCTGCTTTCGT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169935995 88 + 171630274 CACGAGGACGCATTCAGTGAATAAGGGCAGCT--------------------------------------------------------------------------CCCCAGGACAGAGACGGGCACAGGGGAGCTGCA-GGCGCAGTGAGGTCTGCCTTCAC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1336885 88 - 2905041 CACACAGACCCATCCAGTGAATAAGGGCAGCT--------------------------------------------------------------------------CCCCAGGACAGAGATAGGCACAAGGGAGCTGCT-GGCACAGTGAGGTCTGCCTTCAT i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1301017 88 - 2164891 CACACAGACCCATTCAGTGAATAAAGGCAGCT--------------------------------------------------------------------------CCCCAGGACAGAGATGGGCACAAGGGAGCTGCT-GGCACGGTGAGGTCTGCCTTCAT i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1545867 88 - 1813869 CATGAGGACCCATCCAGTGAATAAGGGCAGCT--------------------------------------------------------------------------CCCCAGGACAGAGACGGGCACAAAGGAGCTGCT-GGCGCGGTGACGGCTGCCTTCGT i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10977942 896 - 12073884 I e dasNov3.JH569188 624925 6033 + 760995 I e canFam3.chr1 56209248 4044 + 122678785 I a score=1465994.000000 s hg38.chr6_KB021644v2_alt 148588 160 + 185823 GAGTGCTTGACATCTGGTCGCAGGGT-GATTGTATTTTCTGTTACTCTTTTTATTCAGTGTAAGGTTTTCTTCTCCTTTTTATAGTCCTCTACTGAGTCCCTGGTTATCCTTGACTTAGAGCAATTCCATATCACATAGATCTCCAAATTCCC-CAGACTAG s panTro5.chr6 173605354 160 + 175400573 GAGTGCTTGACATCTGGTCGCAGGAT-GATTGTATTTTCTGTTACTCTTTTTATTCAGTGTAAGGTTTTCTTCTCCTTTTTATAGTCCTCTACTGAGTCCCTGGTTATCCTTGACTTAGAGCAATTCCATATCACATAGATCTCCAAATTCCC-CAGACTAG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171838651 160 + 173848474 GAGTGCTTGACATCTGGTCGCAGGAT-GATTGTATTTTCTGTTACTCTTTTTATTCAGTGTAAGGTTTTCTTCTCCTTTTTATAGTCCTCTACTGAGTCCCTGGTTATCCTTGACTTAGAGCAATTCCATATCACATAGATCTCCAAATTCCC-CAGACTAG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11521765 160 - 12463322 GAGTGCTTGACATCTGGTCGCAGGGT-GATTGTATTTTCTGTTACTCTTTTTATTCAGTGTAAGGTTTTCTTCTCCTTTTTATAGTCCTCTACTGAGTCCCTGGTTATCCTTGACTTAGAGCAATTCCATATCACATAGATCTCCAAATTCCC-CAGACTAG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156352312 160 + 157873769 GAGTGCTTGACATCGGGTCACAGGGT-GATTGTATTTTCTGTTACTCGATTTATTCAGTGTAAGGTTTTCTTCTCCTTTTTATAGTCCTCTACTGAGTCCCTGGTTATCCTTGACTTAGAGCAATTCCATATCACATAGATCTCCAAATTCCC-CAGACTAG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170376572 158 + 172585720 GAGTGCTTGACATCTGGCCACAGGGT-GATTGTAGTTTCTGTGCCTCTTTTTATTCAGTGTGAGGTTTTCTTCTCCTTTATAGAGTTCTCTACTGAGTCCCTGGTGATCCTTGGCTTAGAGCAACTCTATATCAC--AGATCTCCAAATTCCC-CAGACTAG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169121724 158 - 170955103 GAGTGCTTGACATCTGGCCACAGGGT-GATTGTAGTTTCTGTGCCTCTTTTTATTCAGCGTGAGGTTTTCTTCTCCTTTATAGAGTTCTCTACTGAGTCCCTGGTGATCCTTGGCTTAGAGCAACTCTATATCAC--AGATCTCCAAATTCCC-CAGACTAG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8408996 158 + 10161646 GAGTGCTTGACATCTGGCCACAGGGT-GATTGTAGTTTCTGTGCCTCTTTTTATTCAGCGTGAGGTTTTCTTCTCCTTTATAGAGTTCTCTACTGAGTCCCTGGTGTTCCTTGGCTTAGAGCAACTCTATATCAC--AGATCTCCAAATTCCC-CAGACTAG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1439304 158 + 3144229 GAGTGCTTGGCATCTGGCCACAGGGT-GATTGTAGTTTCTGTGCCTCTTTTTATTCAGTGTGAGGTTTTCTTCTCCTTTATAGAGTTCTCTACTGAGTCCCTGGTGATCCTTGGCTTAGAGCAACTCTATATCAC--AGATCTCCAAATTCCT-CAGACTAG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96725424 160 + 98384682 GAGTGCTTGGCATCTGGCCACAGGGT-GATTGTATTTTCTGTGACTCTTTTTATTCAGCGTGAGGTTTTCTTCTCCTTTATAGAGTTCTCTACTGAGTCCCTGTTGATCCTTGGCTTAGAGTGATTCTATATCACATAGATCTCCAAATTCCC-CAGACTAG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8271836 158 - 10857215 GAGTGCTTGGCATCTGGCCACAGGGT-GATTGTAGTTTCTGTGCCTCTTTTTATTCAGTGTGAGGTTTTCTTCTCCTTTATAGAGTTCTCTACTGAGTCCCTGGTGATCCTTGGCTTAGAGCAATTCTATATCAC--AGATCTCCAAATTCCC-CAGACTAG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15651235 160 - 23502949 GAGTGCTTGGCATCTGGCCACAGGGT-GATTGTAGTTTCTGTGACTCTTTTTATTCAGCGTGAGGTTTTCTTCCTCTTTACAGAGTTCTCTACTGAGGCCCTGGTGATCCTTGGCTTAGAGCAATTCTGTATCACATAGATCTCCAAATTCCC-CAGACTAG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169936083 152 + 171630274 GGGTGCTTGACACCTGGTCCCAGGAT-GGTTCTAGTTTCGATTCCTC-ATTTATTCAGTGTAA-------CTCTCCTTTGTATCATCCTATACTGCACCCTTGATGATCCTTGGCTTAAAGCAATTCCATACCACATAGATCTCCACATTCCT-CAGACTAG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1336973 159 - 2905041 GGGTGCTTGACACCTGGTCACAGGAT-GGTTCTACTTTCTATTCCTC-TTTCATTCAGTGTAAAGCTTTCTTCTCCTTTTTACCATCCTATACTGGATCCCTGATGGTCCTTGTCTTAAAGCAATTCCATATCACATAGATCTCCAAATTCCT-CAGACTAG i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1301105 159 - 2164891 GGGTGCTTGACACCTGGTCACAGGAT-GGTTCTACTTTCTATTCCTC-TTTTACTCAGCGTAAGGCTTTCTTTTGCTTTTTATCATCCTATACTGGATCCCTGATGGTCCTTGTCTTAAAGCAATTCCATAACACATAGATCTCCAAATTCCT-CAGACTAG i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1545955 159 - 1813869 GGGTGCTTGACGCCTGGTCACAGGAT-GGCTCTGTTTTCTATTCCGC-TTTTATTCAGTGCAAGTCTTTCTTCTCCTCTTTATCATCCTGTACTGGATCCCTGATGATCCTTGTCTTAAAGAAATTCCATATCACATAGATCTTCAAATTCTT-CAGACTAG i aotNan1.NW_018494782v1 C 0 C 0 s dasNov3.JH569188 630958 161 + 760995 GATCACTTAATTGCTGATCATAGTGTAAATTACATTTTCCATCCCTCTTCTTATTCAAGGTGAGGTTAT-TTCCCCTTTTTATAATTTTACAATGGCCCCCAAATGATCCCCAATCTAGAGGCATTCTATATTACATATGCCCTAACATTCCCTCAGACTaa i dasNov3.JH569188 I 6033 I 103 e otoGar3.GL873575 10977942 896 - 12073884 I e canFam3.chr1 56209248 4044 + 122678785 I a score=4785274.000000 s hg38.chr6_KB021644v2_alt 148748 535 + 185823 AAAATGTGCTTTTGAACAAATTGTGTGGCTTTACTAGAGCATG-ATAATTGGCAAAAAGAAAACTTGGAAGACTCAGGGCCCAAAAGCCTGA---CAATCACAAATCAATCTCCATAGTTTTTGTCCACCCATTGTGGCAAAGGGAGAATCTGAACTGCGGTCTTGAAACCAGTGGCTGATGTGAAGCCCCTTGGGACGCAGTGGTGAGGGGCTCCTGCGTCAGAGTC------ATCTGGCTGCACTTCC-GGTGCTACATGACCTTAGGGGAGTCACCAGGACTCCCCAAAT--------------AACGCCAACACCTCCAGCACGGAAGAGGGGGTGTTGGTAGTGACTACAGCATGATGACTAGTGG--CACCAAACACTTTGCCACGCGGAATGAGCAGGGCAGTCCGTGGACACCCACGTGGTGTGGTATGTTCTTGAATGAGCCCAGATCATTGGTCCCCCCC-----CATCCACAGAGCATTCACACATCAGATCTTCTTACACGATTCACCC-ACACTGGAACAGAGGAGGCTGCTGTATTATTTTTGCTTGAAAGTGA s panTro5.chr6 173605514 534 + 175400573 AAAATGTGCTTTTGAACAAATTGTGTGGCTTTACTAGAGCATG-ATAATTGGCAAAAAGAAAACTTGCAAGACTCAGGGCCCAAAAGCCTGA---CAATCACAAATCAATCTCCGTAGTTTTTGTCCACCCATTGTGGCAAAGGGAGAATCTGAACTGCGGTCTTGAAACCAGTGGCTGATGTGAAGCTCCTTGGGACGCAGTGGTGAGGGGCTCCTGCGTCAGAGTC------ATCTGGCTGCACTTCC-GGTGCTACATGACCTTAGGGGAGTCACCAGGACTCCCCAAAT--------------AACGCCAACACCTCCAGCACGGAGGAGGGGGTGTTGGTGGTGACTACAGCATGATGACTAGTGG--CACCAAACACTTTGCCACGCGGAATGAGCAGGGCAGTCCGTGGACACCCACGTGGTGTGGTATGTTGTTGAATGAGCCCAGATCATCGGTCCCCCCC------ATCCACAGAGCATTCAGACATCAGATCTTCTTACACGATTCACCC-ACACTGGAACAGAGGAGGCTGCTGTATTATTTTTGCTTGAAAGTGA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171838811 534 + 173848474 AAAATGTGCTTTTGAACAAATTGTGTGGCTTTACTAGAGCATG-ATAATTGGCAAAAAGAAAACTTGCAAGACTCAGGGCCCAAAAGCCTGA---CAATCACAAATCAATCTCCGTAGTTTTTGTCCACCCATTGTGGCAAAGGGAGAATCTGAACTGCGGTCTTGAAACCAGTGGCTGATGTGAAGCTCCTTGGGACGCAGTGGTGAGGGGCTCCTGCGTCAGAGTC------ATCTGGCTGCACTTCC-GGTGCTACATGACCTTAGGGGAGTCACCAGGACTCCCCAAAT--------------AACGCCAACACCTCCAGCACGGGGGAGGGGGTGTTGGTGGTGACTACAGCATGATGACTAGTGG--CACCAAACACTTTGCCACGCGGAATGAGCAGGGCAGTCCGTGGACACCCACGTGGTGTGGTATGTTGTTGAATGAGCCCAGATCATCGGTCCCCCCC------ATCCACAGAGCATTCAGACATCAGATCTTCTTACACGATTCACCC-ACACTGGAACAGAGCAGGCTGCTGTATTATTTTCGCTTGAAAGTGA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11521925 533 - 12463322 AAAATGTGCTTTTGAACAAATTGTGTGGCTTTACTAGAGCATG-ATAATTGGCAAAAAGAAAACTTGCAAGACTCAGGGCCCAAAAGCCTGA---CAATCACAAATCAATCTCCGTAGTTTTTGTCCACCCATTGTGGCAAAGGGAGAATCTGAACTGCGGTCTTGAAACCAGTGGCTGATGTGAAGCCCCTTGGGACGCAGTGGTGAGGGGCTCCTGCGTCAGAGTC------ACCTGGCTGCACTTCT-GGTGCTACATGACCTTAGGGGAGTCACCAGGACTCCCCAAAT--------------AACGCCAACACCTCCAGCACGGAAGAGGGGGTGTTGGTAGTGACTACAGCATGATGACTAGTGG--CACTAAACACTTTGCCACGCGGAATGAGCAGGGCAGTCCGTGGACACCCACGTGGTGTGGTGTGTTCTTGAATGAGCCCAGATCATCGGTCGCCCC-------ATCCACAGAGCATTCAGACATCAGATCTTCTTACACGACTCACCC-ACACTGGAACAGAGGAGGCTGCTGTATTATTTTTGCTTGAAAGTGA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156352472 547 + 157873769 AAAATGTGCTTTTGAACAAATTGTGTGGTTTTACTAGAGCATG-ATAATTGGCAAAAAGAAAATTTGCAGGACTCAGGGCCCAAAAGCCTGA---CAATCACAAATCAATCTCCGTAGTTTTCGTCCACCCATTGTGGCACAGAGAAAATCTGAACTGTGGTCTTGAAACCAGTGGCTGATGTGAAGCCCCTTGGGACGCAGTGGTGAGGAGCTCCTGCGTCAGAGTC------ACCTGGCTGCACTTCC-AGTGCCACATGACCTTAGGGGAGTCACCAGGACTCCCCAAATGCCAGGACTCCCCAAATGCCAACACCTCCAGCACCAAAGAGGGGGTGTTGGTAGTGACTACAGTGTGGTGACTAGTGG--CATCAAACACTTTGTCACGCGGAATGAGCAGGGCAGTCCGTGGACACCCATGTGGTGTGGTATGTTCTTGAATGAGCCCAGATCATGGGTCCCCCC-------ATCCACAGAGCATTCAGACATCAGATCTTCTTACACGACTCACCC-ACGCCGGAACAGAGGAGGCTGCTGTATTATTTTTGCTTGAAAGTGA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170376730 536 + 172585720 AAAATGCACTTTTGAACAAATTGTGTGGCTTTACTAGAGCATG-ATAGTTGGCAAAAAGAAAATTTGCAGGACTCGGGGCCCAACAGCCTGA---CAATCACAGATCAATCTCCATGGTTTTTGTCCACCTGTTGTGGCAAAGGGAGAATCTGAACTGTGGTCTT-AAACCAGCGGCTGATGTGAAGCCCCTTGGGACCGAGTGGTGAGGAGCTCCTGTGCCAGAGTC------ATCCGACTGCATGTCT-GGTGCTGTGTGACCTTAGAGGAGTCATCAGCACTCCCCA-----------------AACACCAACACTTCCAGCACTGAAGAGGGGGTGTTGGCAGTGACTACAGCGTGGGGACTAGTGG--CACCAAACACTTTGCCACGCGGAATAAGCAGGGTGGTCCGTGGACACCCACGTGGTGTGGTGTGTTCTTGAATGTGCCCAGATCATTTGTCCCCCGCTCCCCCATCCGCAGAGCATTCAGACATCAGACCTTCTTACACGACGCACCC-ACACCAGAACAGAGGGGGCTGCTGTACCATTTTTGCTTGAAAATGA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169121882 536 - 170955103 AAAATGCACTTTTGAACAAATTGTGTGGCTTTACTAGAGCATG-ATAGTTGGCAAAAAGAAAATTTGCAGGACTCGGGGCCCAACAGCCTGA---CAATCACAGATCAATCTCCGTAGTTTTTGTCCACCTGTTGTGGCAAAGGGAGAATCTGAACTGTGGTCTT-AAACCAGCGGCTGATGTGAAGCCCCTTGGGACCGAGTGGTGAGGAGCTCCTGTGCCAGAGTC------ATCCGACTGCATGTCT-GGTGCTGTGTGACCTTAGAGGAGTCATCAGCACTCCCCA-----------------AACACCAACACTTCCAGCACTGAAGAGGGGGTGTTGGCAGTGACTACAGCGTGGGGACTAGCGG--CACCAAACACTTTGCCACGCGGAATAAGCAGGGTGGTCCATGGACACCCACGTGGTGTGGTGTGTTCTTGAATGTGCCCAGATCATTTGTCCCCCGCTCCCCCATCCGCAGAGCATTCAGACATCAGACCTTCTTACACGACTCACCC-ACACCAGAACAGAGGGGGCTGCTGTATCATTTTTGCTTGAAAATGA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8409154 536 + 10161646 AAAATGCACTTTTGAACAAATTGTGTGGCTTTACTAGAGCATG-ATAGTTGGCAAAAAGAAAATTTGCAGGACTCGGGGCCCAACAGCCTGA---CAATCACAGATCAATCTCCGTAGTTTTTGTCCACCTGTTGTGGCAAAGGGAGAATCTGAACTGTGGTCTT-AAACCAGCGGCTGATGTGAAGCCCCTTGGGACCGAGTGGTGAGGAGCTCCTGTGCCAGAGTC------ATCCGACTGCATGTCT-GGTGCTGTGTGACCTTAGAGGAGTCATCAGCACTCCCCA-----------------AACACCAACACTTCCAGCACTGAAGAGGGGGTGTTGGCAGTGACTACAGCGTGGGGACTAGTGG--CACCAAACACTTTGCCACGCGGAATAAGCAGGGTGGTCCATGGACACCCACGTGGTGTGGTGTGTTCTTGAATGTGCCCAGATCATTTGTCCCCCGCTCCCCCATCCGCAGAGCATTCAGACATCAGACCTTCTTACACGACTCACCC-ACACCAGAACAGAGGGGGCTGCTGTATCATTTTTGCTTGAAAATGA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1439462 536 + 3144229 AAAACGTGCTTTTGAACAAATTGTGTGGCATTACTAGAGCATG-ATAGTTGGCAAAAAGAAAATTTGCAGGACTCAGGGCCCAACAGCCTGA---CAATCACAGATCAATCTCCGTAGTTTTTGTCCACCTGTTGTGGCAAAGGGAGAATCTGAACTGTGGTCTT-AAACCAGTGGCTGATGTGAAGCCCCTTGGGACCGAGTGGTGAGGAGCTCCTGTGCCAGAGTC------ATCCAATTGCACGTCC-GGTGCTGTGTGACCTTAGAGGGGTCATCAGCACTCCCTA-----------------AACACCGACACTTCCAGCACTGAAGAGGGGGTGTTGGCAGTGACTACAGCGTGGGGACTAGTGG--CACCGAACGCTTTGCCACGCGGAATAACCAGGGCGGTCCATGGACACCCACGTGGTGTGGTGTGTTCTTGAATGAGCCCAGATCATCTGTCCCCCGCTCCCCCATCCGCAGAGCATTCAGACATCAGACCTTCTTACACGACTCACCC-ACACCGGAACAGAGGGGGCTGCTGTATCATTTTTGCTTGAAAATGA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96725584 537 + 98384682 AAAATGCACTTTTGAACAAATTGTGTGGCATTACTAGAGCATG-ATAGTTAGCAAAAAGAAAATTTGCAGGACTCGGGGCCCAATAGCCTGA---CAATCACAGATCAATCTCTGTAGTTTTTGTCCACCTGTTGTGGCAAAGAGAGAATCTGAACTGTGGTCTTGAAACCAGCAGCTGATGTGAAGCCCCTTGGGACCCAGTGGTGAGGAGCTCCTGTGCCAGAGTC------ATCCGACTGCACCTCCGGGTGCTGTGTGACCTTAGAGGAGTCATCAGCACTCCCCA-----------------AACACCAACACTTCCAGCACTGAAGAGGGGGTGCTGGCAGTGACTACAGCGTGGGGACTAGTGG--CACCAAACACTTTGCCACGGGGAATAAGCAGGGCGGTCCATGGACACCCATGTGGTGTGGTGTGTTCTTGAATGAGCCCAGATCATCTGTCCCCCGCTCCCCCATCCGCAGAGCATTCAGACATCAGACCTTCTTACACGACTCACCC-ACACCAGAACAGA-GGGGCTGCTGTATCATTTTTGCTTGAAAGTGA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8271994 537 - 10857215 AAAATGCACTTTTGAACAAATTGTGTGGCTTTACTAGAGCATG-ATAGTTGGCAAAAAGAAAATTTGCAGGACTCGGGGCCCAACAGCCTGA---CAATCACAGATCAATCTCCATAGTTTTTGTCCACCTGTTGTGGCAAAGGGAGAATCTGAACTGTGGTCTTGAAACCAGCAGCTGATATGAAGCCCCTTGGGACCCAGTGGCGAGGAGCTCCTGTGCCAGAGTC------GTCCGACTGCACGTCC-GGTGCTGTGTGACCTTAGAGGGGTCATCAGCACTCCCCA-----------------AACGCCAACACTTCCAGCACTGAAGAGGGGGTGTTGGCAGTGACTACAGCGTGGGGACTAGTGG--CACCGAACGCTTTGCCACGCGGAATAACGAGGGCGGTCCATGGACACCCACGTGGAGTGGTGTGTTCTTGAATGAGCCCAGATCATCTGTCCCCCGCTCCCCCATCCGCAGAGCATTCAGACATCAGACCGTCTTACACGACTCACCC-ACACCGGAACAGAGGGGGCTGCTGTATCATTTTTGCTTGAAAATGA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15651395 522 - 23502949 AAAATGTGCTTTTGAACAAATTGTATGGCTTTACTACAGCATG-GCGATTGGCAAAAAGAAAATTTGCAGGACTCGGGGCCCAACAGCCTGA---CAATCACAAATCAGTCTCCGTAGTTTTTGTCCACCTGTTGTGGCAAAGGGAGAATCT--------------GAACCAGCGGCTGATGTGAAGCCCCTTGGGACGCAGTGGTGAGGAGCTCCTGTGTCAGAGTT------GTCCGACTGCACGTTC-GGTGTTGTGTGACCTTAGAGGAGTCATCAGCACTCCCTA-----------------AACGCCAACACTTCCAGCACTGAAGAGGGGGTGTTGGTAGTGACTACAGCATGGGGACTAGTGG--CACCAAACACTTTGCCACATAGAATAAGCAGGGCAGTCCGTGGACATCCCCGTGGTGTGGTGTGTTCTTGAATGAGCCCAGATCATCTGTTCCCTGCTTCCCCATCCGCAGAGCATTCAGACATCAGACCTCTTTACACGACTCACCC-ACACCGGAACAGAGGGGGCTGCTGTATTA-TTTTACTTGAAAGTGA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169936235 518 + 171630274 AAAAAGTGCTTTTGGACAAATTGTGTGGCTTTACTACAGCGTG-ATAATTGGCAAAAAGAAAATGTGCAAAACTTTGGGCCCCAAATCCTGA---CAATCACAAATAAATCTCTGTAGTTTTTGTCCACCCATGGTGGCAAAGGGAGAATCCGAACTGTGGTCTTGAAGCT-TCGGCTGCTATGAAGCCCCGTGGGACGCAGTGGAGAGGAGCTCCCGGATC--AGTC------AGCCAGCTGCACTTCC-CATGGTGCTTGACCTCAGGGGCATCACCA-GACTCCCCA-----------------AATGCCAGCACCTCCAGCACCAATGATGGGGTGTTGGCACTGACTACTCCATGGGGACTAGCGG--CACCAAACACTTTGCCATGCAGAATAAGCTGGGCAGTCCGTGGACACCCACATGGTG-----TGTGCATGAATGAGCCCAGATC---CGTCCTCCGT------GTCCACAGAGCATTCCGGCATC-GACCTTGTTACACGACTCACCC-ACACCGGGACAGAGGGGGCTGCTGTATTATTTTTACTTGAAATtga i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1337132 518 - 2905041 AAAAAGTGCTTTTGGACAAGTTGTGTGGCTTTGCTAGAGCATG-ATAATTGACAGAAAGAAAATGTGCAGGGCTTTGGGCCCCAAATCCTGA---CAATCACAAATAAATCTCCATAGTGTTTGTCCAGCCATGCTCGCAAAGGGAGAATCTGAAC--TGGTCTCGAAGCC-ACGGCTGCTGTGAAGCCCCGTGGGACGCAGTGGCGAGGAGCTGCTGGGTC--AGTC------AGCCAGTTGCACTTCC-CGTGGTACATGACCTTGGGGGCATCACCAGGACTTCCCA-----------------GACACCAGCACCTCCAGCACCAAAGATGGAGTGTTGGCACTGACTACACTGTGGGGACGAGTGG--CACCAAACACTTTGCCACGTGGAATAAGCTGGGCAGTCCATGGACACCCACATGGTG-----TGTGCAGGAATGAGCCCAGATC---CATCCTCCGT------GTCCACAGAGCATTCAGGCATCAGACCTTGTTACATGACTCACCC-ACACCGGAACAGAGGGGGCTGCTGTATTGCTTTTACTTGAAATTGA i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1301264 520 - 2164891 AAAAAGTGCTTTTGGACAAGTTGTGTGGCTTTACTAGAGCATG-ACAATTGGCAAAAAGAAAATGTGCAGGACTTTGGGCCCCAAATCCTGA---CAATCACAAATAAATCTCCATAGTGTTTGTCCACCCATGGTGGCAAAGGGGGAATCTGAACTGTGGTGTTGAAGCC-GCGGCTGCTGTGAAGCCCCATGGGACGCAGTTGAGAGGAGCTCCTGGGTC--AGTC------AGCCAGCTGCACTTCC-CGTGGTACGTGACCTCGGGGGCATCACCAGGACTCCCCA-----------------AACGCCAGCACCTCCAGCACCAAAGACGGAGTGTTGGCACTGACTACACCGTGGTAACGAGTGG--CACCAAACACTTTGCCATGCGGAATAAGCTGGGCAGTCCCTGGACACCCACATGGTG-----TGTGCATGAATGAGCCCAGATC---CGTCCTCCGT------GTCCACAGAGCATTCAGGCATCAGACCTTGTTACATGACTCACCC-ACACCCGAACAGAGGGGGCTGCTGTATTATTTTTACTTGAAATTGA i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1546114 520 - 1813869 AAAAAGTGCTTTTGGACAAATCGTGTGGCTTTACTAGAGCACG-ATAATTGGCAAAAAGAAAATGTGCAGGACTTTGGGCCCCAAATCCTGA---CAATCAGAAATAAATCTCCGTAGTTTTTGTCCACCCATGGTGGCAAAGGTGGAATCTGAACTGTGGTCTTGAAGCC-GTGGCTGTGGTGAAGCCCCGTGGGATGCAGTGGAGAGGAGCTCCCAGATC--AGTC------AGCCAGCTGCACTTCC-CGTGGCGCGTGACCTCTGCGGCATCACCAGGACTCCCCA-----------------GACGCCAGCACCTCCAGCACCAAAGATGGGGTGTTGGCACTGACTACACCGTGGGGATGAGTGG--CACCTAACAGTTTGCCACGTGGAATAAGCTGGGCAGTCTGTGGACACCCACGTGGTG-----TGTGCATGAATGAGCCCAGATC---CGTCCTGTGT------GTCCACAGAGCATTCAGGCATCAGACCTTGTTACACGACTCACCC-ACACTGGAACAGAGGGGGCTGCTGTGTTATTTTTACTTCAAATtga i aotNan1.NW_018494782v1 C 0 C 0 s dasNov3.JH569188 631222 495 + 760995 aaaGAGTGTTTTTGAACAAACTGTGTGGTTTCGCTAGAGCATGAAAAAGAGGTAAAGTGAAAATTTGGAAAACTTGGGGTCCCAGAGCATGGACTCAACAGCAGTTAAATCTCAATAATTTTAATCCAATGAGTGTGGTCCA-------------------CCTTGAGGACAACAGCTGATGTGAGACCCTTTAGTTCCcactggcaaagagcacattcgctgaaatcacaaagacttggcttcaaactc-tgagctatgtaacgtttgcaaaag-acttgaactttcta-----------------ag-------------gtcattaaaatggggaaatgggtagtaactatattgtggtgattgatggtataccaaatgtgatgatacat---atgaaCACAATCCTCTGTAAATATCCAACTGACT-----TAGCCTTGAATTA-CCCCTTTCAGTATTCCTCCACT-----TTTCATAGCATGCTCAGG-----GACTATTTTATGAAATTCACTCAACAGTGAATCAGAGCCGGCTGC---AATATTTTTGCTTGAAAGCGA i dasNov3.JH569188 I 103 I 1 e otoGar3.GL873575 10977942 896 - 12073884 I e canFam3.chr1 56209248 4044 + 122678785 I a score=3431634.000000 s hg38.chr6_KB021644v2_alt 149283 388 + 185823 TGATAGtgatggaagttgtgagaccttgggtctgg---tcttagtttaaaaggatttaagcaagagacacacagcaaaggagacgcagcgtgaagtaa-ttttttgcaaaggaaaaataatatttttacagttaggtgcagaataagacaggacagcttggga-------gagagaggattcagggtgggtgctctccaaggtgagacagcagagagcagcaggagggaggctccctctgtgggagtcttccacgattacccatgagggggtgggaggaggcgctgcttgg-ggcatgttctgggtgctcctctggatgcac--gcatggtagttgtccgtgcttgct--cacacgtcacatgtctcagggtcttgtatctccacccatggtttgctttttatg s panTro5.chr6 173606048 387 + 175400573 TGAtggtgatggaggttgtgagaccttgggtctgg---tcttagttgaaaaggatttaagcaagagacacacagcaaaggagacgcagcatgaagtaa-ttttttgcaaaggaaaaataatattttgacagttaggtgcagaata-gacaggacagcttggga-------gagagaggattcagggcgggtgctctccaaggtaagacagcagagagcagcaggagggaggctccctctgtgggagtcttccacgattacccacgagggggtgggaggaggcgctgcttgg-ggcatgttctgggtgctcctctggatgcac--gcatggtagttgtccgtgcttgct--cacatgtcacatgtctcagggtcttgtatctccacccatggtttgctttttatg i panTro5.chr6 C 0 C 0 s panPan2.chr6 171839345 387 + 173848474 TGAtggtgatggaggttgtgagaccttgggtctgg---tcttagtttaaaaggatttaagcaagagacacacagcaaaggagacgcagcatgaggtaa-ttttttgcaaaggaaaaataatattttgacagttaggtgcagaata-gacaggacagcttggga-------gagagaggattcagggcgggtgctctccaaggtaagacagcagagagcagcaggagggaggctccctctgtgggagtcttccacgattacccacgagggggtgggaggaggcgctgcttgg-ggcatgttctgggtgctcctctggatgcac--gcatggtagttgtccgtgcttgct--cacatgtcacatgtctcagggtcttgtatctccacccatggtttgctttttatg i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11522458 387 - 12463322 TGAtggtgatggaggttgtgagaccttgggtctgg---tcttagtttaaaaggatttaagcaagagacacacagcaaaggagatgcagcatgaagtaa-ttttttgcaaaggaaaaataatattttgacagttaggtgcagaata-gacaggacagcttggga-------gagagaggattcagggcgggtgctttccaaggtgagacagcagagagcagcaggagggaggctccctctgtgggagtcttccacgattacccatgagggggtgggaggaggcgctgcttgg-ggcatgttctgggtgctcctctggatgcac--acatggtagttgttcgtgcttgct--cacacgtcacatgtctcagggtcttgtatctccacccatggtttgctttttatg i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156353019 390 + 157873769 TGAtggtgatggaggttgtgagaccttgggtctgg---tcttagtttaaaaggatttaagcaagagacacacagcaaaggagatgcagcatgaagtaatttttttgcaaaggaaaagtaatattttgaaagttaggtgcagaata-gacaggacagtttggga-------gagagaggattcagggcgggtgctctccaaggtgagacagcagagatcagcaggagggaggctccctctgtaggagtcttccacgattacccatgagggggtgggaggaggcgctgcttgg-ggcctgttctggatgctcctctggatgcac--gcatggtagttgtccatgcttgctcacacacgtcacatgtctcgggatcttgtatctccacccaaggtttgctttttatg i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170377266 387 + 172585720 TGAtggtgatggaggttgtgagactttgggtctgg---tcttagtttaaaaggatttaagcaagagacacacagcaaaggagatgcagtgtgaagtaa-tttattgcaaaggaaaaataatattttgaaagtcaggtgcagaata-gacaggagaacttggga-------gagagaggattcagggcgggtcctctctggggtgagacagcagagaccagcaggagggaggctccctctgtgggaatcttccagggttacccaggagggggtgggaagacgtgctgcttgg-ggtatgttctggatggtcctctgggtgcac--gcatggtagctgtccatgcttgct--cacatgtcacgtgtctcagggtcttgtatctccacccaaggtttgcgttttatg i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169122418 387 - 170955103 TGAtggtgatggaggttgtgagactttgggtctgg---tcttagtttaaaaggatttaagcaagagacacacagcaaaggagatgcagtgtgaagtaa-tttattgcaaaggaaaaataatattttgaaagttaggtgcagaata-gacaggagaacttggga-------gagagaggattcagggcgggtcctctctggggtgagacagcagagaccagcaggtgggaggcaccctctgtgggaatcttccatggttacccaggagggggtgggaagacatgctgcttgg-ggcatgttctggatggtcctctgggtgcac--gcatggtagctgtccatgcttgct--cacatgtcacgtgtctcagggtcttgtatctccacccaaggtttgcgttttatg i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8409690 387 + 10161646 TGAtggtgatggaggttgtgagactttgggtccgg---tcttagtttaaaaggatttaagcaagagacacacagcaaaggagatgcagtgtgaagtaa-tttattgcaaaggaaaaataatattttgaaagttaggtgcagaata-gacaggagaacttggga-------gagagaggattcagggcgggtcctctctggggtgagacagcagagaccagcaggtgggaggcaccctctgtgggaatattccatggttacccaggagggggtgggaagacatgctgcttgg-ggcatgttctggatggtcctctgggtgcac--gcatggtagctgtccatgcttgct--cacatgtcacgtgtctcagggtcttgtatctccacccaaggtttgcgttttatg i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1439998 386 + 3144229 TGAtggtgatggaggttgtgagactttgggtctgg---tcttagtttaaaaggatttaagcaagagacacacagcaaaggagatgcagtgtgaagtga-tttattgcaaaggaaaaataatattttgaaagttaggtgcagaata-gac-ggagaacttggga-------gagagaggattcagggcgggtcctctccggggtgagacagcagagaccagcaggagggaggctccctctgtgggaatcttccatggttatccaggagggggtgggaagacacgctgcttgg-ggcatgttctggatggtcctctgggtgcac--gcatggtagctgtccatgcttgct--cacacgccacgtgtctcagggccttgtatctccacccaaggtttgcgttttatg i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96726121 384 + 98384682 TGAtggtgatggaggttgtgagactttgggtctgg---tcttagtttaaaaggatttaagcaagagacacacagcaaaggagatgcagtgtgaagtaa-tttattgcaaaggaaaaataatattttgaaagttaggtgcagaata-gacaggagaacttggga-------gagagaggattcagggtgggtcctctccggggtgagacagc--agaccagcaggagggaggctccctctgtgggaatcttccatggttacccagga-ggggtgggaagacacgctgcttgg-ggcatgttctggatggtcctctgggtgcgt--gcatggtagctgtccatgcttgtt--cagatgtcacatgtctcagggtcttgtatctctacccaaggtttgcgttttatg i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8272531 387 - 10857215 TGAtggtgatggaggttgtgagactttgggtctgg---tcttagtttaaaaggatttaagcaagagacacacagcaaaggagatgcagtgtgaagtga-tttattgcaaaggaaaaataatattttgaaagttaggtgcagaata-gacaggagaacttggga-------gagagaggattcagggtgggtcctctccggggtgagacagcagagaccagcaggagggaggctccgtctgtgggaatcttccatggttacccagcagggggtgggaagacacgctgcttgg-ggcatgttctggatggtcctctgggtgcat--gcatggtagctgtccatgcttgct--cacataccacgtgtctcagggtcttgtatctccacccaaggtttgcgttttatg i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15651917 384 - 23502949 CGAtggtgatggaggttgtgagactttgggtctgg---tcttagtttaaaaggatttaagcaagagacgcatggcaaaggagatgcagtgtgaagtaa-tttattgcaatggaaaaataatattttgaaagttaggtgcagaata-gacaggagaacttggga-------gagagaggattcagggcgggtcctctctggggtgagacagcagaaaccagcaggagggaggctccctctgtaggaatcttccatggttacccagga-ggggtgggaagac--gctgcttgg-ggcatgttctggatggtcctctgggtgcac--gcatggtagctgtccatggttgct--cacatgtcacgtgtctcagggtcttgtatctccacccaaggtttgcgttttatg i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169936753 390 + 171630274 t------gatggaggtggtaagaccttgggtctgggcttcttagtttacaaggatttaagcaacagacacacagcaaaggggatgcagcatgaagtca-tttattgcaaaggaaaacgaatattttgaaaggtaggcgcagaaca-gacaggacagcttgggagacagaggacagaggattcagggcagg--ctttgaagggtgagacagcagagaccggcc-gagggaggctccctctatgggcgtcttccacaattatccacca-ggggtgggaagaggtgctgcttggaagcgtgttctggaaggttctctgggtgcacacacatgggagctgtccgtgcctgct--cacccatcgcatgtctcagaatcttgtgtctccaccccaggtgtgctttttatg i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1337650 386 - 2905041 C------GATGGAgctggtaagaccttggatctgggcttcttagtttacaaggatttaagcaacagacacacagcaaaggagatgtagcatgatgtca-tttattgcaaaggaaagcgaatattctgaaaggt----gcagaaca-gacaagacagcttgggagacagaggacagaggattcagggcagg--ctctgaagggtgagacagcagagactggcc-aaggggggatccctccatgggcgtcttccacgattatccacga-ggcatgggaagaggcactgcttggaggtgtgttctggaaggttctctgggtgcacatgcatgggaactgtctgtgcctgct--cacacatcgcatgtctcagaatcttgtgtctccacccgaggtgtgctttttatg i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1301784 390 - 2164891 C------gatggaggtggtaagatcttgggtctgggcttcttagtttacaaggatttaagcaacagacacacagcaaaggagatgcagcatgaagtca-tttattgcaaaggaaaacgaatattttgaaagttaggtgcagaaca-gacagaatagcttgggaaacagaggacagaagattcagggcagg--ctctgaagggtgagacagcagagaccggcc-gagggaggctccctctatgggcgccttccacaattatccatga-ggggtgggaagaggcgctgcttggaaaagtgttctggaaggttctctgggtgcacatgcatgggagctgtccgtgcctgct--cacacatcacacgtctcagaatcttgtgtctccacccaaggtgtgctttttatg i cebCap1.NW_016107695v1 C 0 I 53 s aotNan1.NW_018494782v1 1546634 390 - 1813869 t------gatggaggtggtaagaccttgggtctgggcttcttagtttacgaggatttaagcaacagacacacggcaaaggggatgcagcttgaagtca-tttattgcaaaggaaaatgaatattttgaaagttaggtgcagaaca-gacaggacagcttgggagacagaggacagaggattcagggcagg--ctctgaaaggtgagacagcagagaccggcc-gagggaggctccctccatgggcgtcttccacgattatccacga-ggggtgcgaagaggtgctgcttggaagcatgttctggaagcttctctgggtgcacacgcgtgggagctgtccatgcctgct--cacacatcgcatgtctcagaatcttgtgtctccacccaaggtgtgctttttatg i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10977942 896 - 12073884 I e dasNov3.JH569188 631717 1 + 760995 I e canFam3.chr1 56209248 4044 + 122678785 I a score=347795.000000 s hg38.chr6_KB021644v2_alt 149671 47 + 185823 attataaagagcaaagggtcagtttgagga-cggtaaaatcaaagtgc s panTro5.chr6 173606435 47 + 175400573 attataaagagcaaagggtcagtttgagga-cggtaaaatcaaagtgc i panTro5.chr6 C 0 C 0 s panPan2.chr6 171839732 47 + 173848474 attataaagagcaaagggtcagtttgagga-cggtaaaatcaaagtgc i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11522845 46 - 12463322 attataaagagcaaagggtcagtttga-ga-tggtaaaatcaaagtgc i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156353409 47 + 157873769 attataatgagcaaagggccagtttgagga-tggtaaaatcaaagtgc i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170377653 47 + 172585720 agtataaagagcaaagggtcagtttgagga-cggtaaaatcaaagtgc i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169122805 47 - 170955103 agtataaagagcaaagggtcagtttgagga-cggtaaaatcaaagtgc i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8410077 47 + 10161646 agtataaagagcaaagggtcagtttgagga-cggtaaaatcaaagtgc i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1440384 47 + 3144229 agtataaagagcaaagggtcagtttgagga-tggtaaaatcaaagtgc i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96726505 47 + 98384682 agtataatgagcaaagggtcagtttgagga-cggtaaaatcaaagtgc i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8272918 47 - 10857215 agtataaagagcaaagggtcagtctgagga-cggtaaaatcaaagtgc i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15652301 47 - 23502949 agtataatgagcaaagggtcagtttgagga-cggtaaaatcaaagtgc i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169937143 47 + 171630274 gtgatactgagcaaa-ggtcagctcgaggaccagtaaaagcgaagtgc i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1338036 47 - 2905041 gtgatactgagcaaa-ggttagcttgaggaccaggaaaaccaaagtgc i saiBol1.JH378287 C 0 C 0 s aotNan1.NW_018494782v1 1547024 46 - 1813869 atgataaag-gcaaa-ggtcagcttgaggaccagtaaaaccaaagtgc i aotNan1.NW_018494782v1 C 0 I 13 e otoGar3.GL873575 10977942 896 - 12073884 I e cebCap1.NW_016107695v1 1302174 53 - 2164891 I e dasNov3.JH569188 631717 1 + 760995 I e canFam3.chr1 56209248 4044 + 122678785 I a score=669123.000000 s hg38.chr6_KB021644v2_alt 149718 142 + 185823 acatgctctctgcaggggaaattccctactgaaggtagctttgcttgagggagctcagtgacaatgtcaatgctg------------aggcttgctgtgttgattttacagtcaccacgtacaccgtacaccactgtccaccaatgtccaccac s panTro5.chr6 173606482 142 + 175400573 acatgctctctgcaggggaaattccctactgaaggtagctttgcttgagggagctcagtgacaatatcaatgctg------------aggcttgctgtgttgattttacagtcaccacgtacaccgtacactactgtccaccaatgtccaccac i panTro5.chr6 C 0 C 0 s panPan2.chr6 171839779 142 + 173848474 acatgctctctgcaggggaaattccctactgaaggtagctttgcttgagggagctcagtgacaatatcaatgctg------------aggcttgctgtgttgattttacagtcaccacgtacaccgtacactactgtccaccaatgtccaccac i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11522891 135 - 12463322 acatgctctctgcaggggaaattccctactgaaggtagctttgcttgagggagctcagtgacaatgtcaatgctg------------aggcttgctgtgttgattttacagtcaccacgtacacc-------agtgtctaccaatgtccaccac i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156353456 135 + 157873769 acatgctctctgcaggggaaattccctactgaaggtagctttgcttgagggagctcaatgacaatgtcaatgccg------------aggcttgctgtgtcgattttactgtcaccgtgtacacc-------agtgtccaccaatgtccaccac i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170377700 125 + 172585720 acatgctctctgcaggggaaattccctactgaaggtagctttgtttgagcgagctcaatgccaatgccaacatcg------------aggcttgctgtgtcaattgtacagtcaccacctacacc-----------------aacgtccaccac i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169122852 125 - 170955103 acatgctctctgcaggggaaattccctactgaaggtagctttgtttgagcgagctcaatgccaatgccaacatcg------------aggcttgctgtgtcaattgtacagtcaccacctacacc-----------------aacgtccaccac i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8410124 125 + 10161646 acatgctctctgcaggggaaattccctactgaaggtagctttgtttgagcgagctcaatgccaatgccaacatcg------------aggcttgctgtgtcaattgtacagtcaccacctacacc-----------------aacgtccaccac i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1440431 125 + 3144229 acatgctctctgcaggggaaattccctactgaaggtagctttgtttgagcgagctcaatgccaatgccaacatcg------------aggcttgctgtgtcaattgtacagtcaccacgtacacc-----------------aatgtccaccac i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96726552 125 + 98384682 acgtgctctctgcaggggaaattcccgactgaaggtagctttgtttgagcgagctcaatgccaatgccaacgccg------------acgcttgctgtgtcaattgtacagtcaccacgtacacc-----------------aatgtccaccac i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8272965 125 - 10857215 acatgctctctgcgggggaaattccctactgaaggtagctttgtttgagcgagctcaatgccaatgccaacatcg------------aggcttgctgtgtcaattgtacagtcaccacgtacacc-----------------aatgtccaccac i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15652348 137 - 23502949 acatgctctctgcaggggaaattccctactgaaggtagctttgcttgagcgagctcaatgccaatgccaatgccgatgccaatgccaaggcttgctgtgtcaattgtacagtcaccacatacacc-----------------aatgtccaccac i colAng1.NW_012114488v1 C 0 C 0 e otoGar3.GL873575 10977942 896 - 12073884 I e saiBol1.JH378287 1338083 0 - 2905041 C e aotNan1.NW_018494782v1 1547070 13 - 1813869 I e cebCap1.NW_016107695v1 1302174 53 - 2164891 I e calJac3.chr4 169937190 0 + 171630274 C e dasNov3.JH569188 631717 1 + 760995 I e canFam3.chr1 56209248 4044 + 122678785 I a score=322217.000000 s hg38.chr6_KB021644v2_alt 149860 56 + 185823 cactgtgga-------ccac-ccaaggacacggcgacttccttgactacctatcctgactcaG------T s panTro5.chr6 173606624 56 + 175400573 cactgtgga-------ccac-ccaaggacacggctacttccttgactacctatcctgcctcaG------T i panTro5.chr6 C 0 C 0 s panPan2.chr6 171839921 56 + 173848474 cactgtgga-------ccac-ccaaggacacggctacttccttgactacctatcctgcctcaG------T i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11523026 56 - 12463322 cactgtgaa-------ccac-ccaaggacacggctacttccttgactacctatcctgcctcaG------T i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156353591 56 + 157873769 cactgtgga-------ccac-ccaaggacacagctacttccttgactacgtatcctgcctcaG------T i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170377825 63 + 172585720 cactgtggactgatgtccac-ccaaggacacggctacttccttgactacctatcctgcctcaG------C i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169122977 63 - 170955103 cactgtggactgatgtccac-ccaaggacacggctacttccttgactacctatcctgcctcaG------C i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8410249 63 + 10161646 cactgtggactgatgtccac-ccaaggacacggctacttccttgactacctatcctgcctcaG------C i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1440556 63 + 3144229 cactgtggaccgatgtccgc-ccaaggacacagctacttccttgactacctatcctgcctcaG------C i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96726677 63 + 98384682 cactgtggaccgatgtccac-ccaaggacacggctacttccttgactacctatcctgcctcaG------C i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8273090 63 - 10857215 cactgtggaccgatgtccac-ccaaggacacggctacttccttgactacctatcctgcctcaG------C i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15652485 63 - 23502949 cactgtgaaccgatgtccac-ccaaggacacggctacttcctcgactacctatcctgtctcaG------C i colAng1.NW_012114488v1 C 0 C 0 s otoGar3.GL873575 10978838 62 - 12073884 CATTGTTGC-------CCACTCCATGGAGACAGA-GCTGGCTGGTATATTCATTTTCCCTTGGAAGTGAT i otoGar3.GL873575 I 896 C 0 e saiBol1.JH378287 1338083 0 - 2905041 C e aotNan1.NW_018494782v1 1547070 13 - 1813869 I e cebCap1.NW_016107695v1 1302174 53 - 2164891 I e calJac3.chr4 169937190 0 + 171630274 C e dasNov3.JH569188 631717 1 + 760995 I e canFam3.chr1 56209248 4044 + 122678785 I a score=733556.000000 s hg38.chr6_KB021644v2_alt 149916 125 + 185823 GATTGGTATTTAATTTAAATTTTGGAACATTTTGAATTT--AGTTTT---TATCAGGG----------------TTCTG-------------CTTCTATCCAGTGCTGACACTTGTGGCAAACCCCGGTGGCATAGAAGCCTTGG-TTCTCACATGGATA s panTro5.chr6 173606680 125 + 175400573 GATTGGTATTTAATTTAAATTTTGGAACATTTTGAATTT--AGTTTT---TATCAGGG----------------TTCTG-------------CTTCTATCCAGTGCTGACACTCGTGGCAAACCCCGGTGGCATAGAAGCCTTGG-TTCTCACATGGATA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171839977 125 + 173848474 GATTGGTATTTAATTTAAATTTTGGAACATTTTGAATTT--AGTTTT---TATCAGGG----------------TTCTG-------------CTTCTATCCAGTGCTGACACTCGTGGCAAACCCCGGTGGCATAGAAGCCTTGG-TTCTCACATGGATA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11523082 125 - 12463322 GATTGGTATTTAATTTAAATTTTGGAACATTTTGAATTT--AGTTTT---TATCAGGG----------------TTCTG-------------CTTCTATCCAGTGCTGACACTCGTGGCAAACCCCGGTGGCATAGAAGCCTTGG-TTCTCACATGGATA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156353647 125 + 157873769 GATTGGTATTTAATTTAAATTTTGGAACATTTTGAATTT--AGTTTT---TATCAGGG----------------TTATG-------------CTTCTATCCAGTGCTGACACTCATAGCAAACCCCGGTGGCATAGAAGCCTTGG-TTCTCACATGGATA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170377888 113 + 172585720 GATTGGTATTGAATTTAAATTTTGGAACATTTTGAATTTAGAGTTTT---TATCAGGG----------------TTCTG-------------CTTCTA--------------TCCTAGAGAACCCCAGTGGCATAGAAGGCTTTA-TTCTCACATGGATA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169123040 113 - 170955103 GATTGGTATTGAATTTAAATTTTGGAACATTTTGAATTTAGAGTTTT---TATCAGGG----------------TTCTG-------------CTTCTA--------------TCCTAGAGAACCCCAGTGGCATAGAAGGCTTTA-TTCTCACATGGATA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8410312 113 + 10161646 GATTGGTATTGAATTTAAATTTTGGAACATTTTGAATTTAGAGTTTT---TATCAGGA----------------TTCTG-------------CTTCTA--------------TCCTAGAGAACCCCAGTGGCATAGAAGGCTTTA-TTCTCACATGGATA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1440619 127 + 3144229 GATTGGTATTTAATTTAAATTTTGGAACATTTTGAATTTAGAGTTTT---TATCAGGG----------------CTCTG-------------CTTCTATCCAGTGCTGACACTCCTAGCGAACCCCTGTGGCATAGAAGCCTTTG-TTCTCTCATGGATA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96726740 127 + 98384682 GATTGGTATTGAATTTAAATTTTGGAACATTTTGAATTTAGAGTTTT---TATCAGGG----------------CTCTG-------------CTTCTATCCAGTGCTGACACTCCTAGCGAACCCTGGTGGCATAGAAGCCTTTG-TTCTCACATGGATA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8273153 127 - 10857215 GATTGGTATTTAATTTAAATTTTGGAACATTTTGAATTTAGAGTTTT---TATCAGGG----------------CTCTG-------------CTTCTATCCAGTGCTGACACTCCTAGCGAACCCTGGTGGCATAGAAGCCTTTG-TTCTCTCATGCATA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15652548 127 - 23502949 GATTAGTATTTAATTTAAATTTTGGAACATTTTGAATTTAGAGTTTT---TATCAGGG----------------CTCTG-------------CTTCTATCCAGTGCTGACACTCCTAGCGAATCCTGGTGGCATAGAACCCTTTG-TTCTCACATGGATA i colAng1.NW_012114488v1 C 0 C 0 s otoGar3.GL873575 10978900 141 - 12073884 GACTGGTATTTAATGTAAGTTTTGGAACATTTTGCATTTAGAGTTTTTAGTATAAGAG----------------ATTTATCGTGAGTACTTTTTTCCATCCAAAGCTTATA-CCTCAGTAAACCCCAGT-GTGTAGAGGCCACGA-TTCCCTTACCAAGA i otoGar3.GL873575 C 0 C 0 s dasNov3.JH569188 631718 142 + 760995 GACTGGTATTTAATGTAAATTTTGGAATATTTTAAATTT--AGTTTT---TATCAGAGATTTCTTGTAAGAGTTCTTTA-------------ATTTTATCTAATGTTAATCATCATAGCAAACCCATTTGGTGTAGAAGCTTTTGACTATATCATGAATA i dasNov3.JH569188 I 1 I 2213 e saiBol1.JH378287 1338083 0 - 2905041 C e aotNan1.NW_018494782v1 1547070 13 - 1813869 I e cebCap1.NW_016107695v1 1302174 53 - 2164891 I e calJac3.chr4 169937190 0 + 171630274 C e canFam3.chr1 56209248 4044 + 122678785 I a score=109416.000000 s hg38.chr6_KB021644v2_alt 150041 16 + 185823 TGTCACTCCCTTCTGA s panTro5.chr6 173606805 16 + 175400573 TGTCACTCCCTTCTGA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171840102 16 + 173848474 TGTCACTCCCTTCTGA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11523207 16 - 12463322 TGTCACTCCCTTCTGA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156353772 16 + 157873769 TGTCACTCCCTTCTGA i nomLeu3.chr3 C 0 I 2228 s rheMac8.chr4 170378001 16 + 172585720 TGTCACTCCCTTCTGA i rheMac8.chr4 C 0 I 5456 s macFas5.chr4 169123153 16 - 170955103 TGTCACTCCCTTCTGA i macFas5.chr4 C 0 I 3595 s macNem1.NW_012011000v1 8410425 16 + 10161646 TGTCACTCCCTTCTGA i macNem1.NW_012011000v1 C 0 I 3055 s cerAty1.NW_012002071v1 1440746 16 + 3144229 TGTCACTCCCTTCTGA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96726867 16 + 98384682 TGTCACTCCCTTCTGA i chlSab2.chr13 C 0 I 2555 s manLeu1.NW_012106474v1 8273280 16 - 10857215 TGTCACTCCCTTCTGA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15652675 16 - 23502949 TGTCACTCCCTTCTGA i colAng1.NW_012114488v1 C 0 I 2725 s otoGar3.GL873575 10979041 16 - 12073884 GGTTGCTGTCTTCTGA i otoGar3.GL873575 C 0 I 1917 e saiBol1.JH378287 1338083 0 - 2905041 C e aotNan1.NW_018494782v1 1547070 13 - 1813869 I e cebCap1.NW_016107695v1 1302174 53 - 2164891 I e calJac3.chr4 169937190 0 + 171630274 C e dasNov3.JH569188 631860 2213 + 760995 I e canFam3.chr1 56209248 4044 + 122678785 I a score=2100.000000 s hg38.chr6_KB021644v2_alt 150057 1 + 185823 C s panTro5.chr6 173606821 1 + 175400573 C i panTro5.chr6 C 0 C 0 s panPan2.chr6 171840118 1 + 173848474 C i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11523223 1 - 12463322 C i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156356016 1 + 157873769 C i nomLeu3.chr3 I 2228 C 0 s cerAty1.NW_012002071v1 1440762 1 + 3144229 C i cerAty1.NW_012002071v1 C 0 I 3093 s manLeu1.NW_012106474v1 8273296 1 - 10857215 C i manLeu1.NW_012106474v1 C 0 I 2628 e otoGar3.GL873575 10979057 1917 - 12073884 I e saiBol1.JH378287 1338083 0 - 2905041 C e aotNan1.NW_018494782v1 1547070 13 - 1813869 I e cebCap1.NW_016107695v1 1302174 53 - 2164891 I e calJac3.chr4 169937190 0 + 171630274 C e dasNov3.JH569188 631860 2213 + 760995 I e colAng1.NW_012114488v1 15652691 2725 - 23502949 I e canFam3.chr1 56209248 4044 + 122678785 I e chlSab2.chr13 96726883 2555 + 98384682 I e macNem1.NW_012011000v1 8410441 3055 + 10161646 I e rheMac8.chr4 170378017 5456 + 172585720 I e macFas5.chr4 169123169 3595 - 170955103 I a score=1332.000000 s hg38.chr6_KB021644v2_alt 150058 2 + 185823 AT s panTro5.chr6 173606822 2 + 175400573 AT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171840119 2 + 173848474 AT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11523224 2 - 12463322 AT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156356017 2 + 157873769 AC i nomLeu3.chr3 C 0 C 0 e otoGar3.GL873575 10979057 1917 - 12073884 I e saiBol1.JH378287 1338083 0 - 2905041 C e aotNan1.NW_018494782v1 1547070 13 - 1813869 I e cebCap1.NW_016107695v1 1302174 53 - 2164891 I e calJac3.chr4 169937190 0 + 171630274 C e dasNov3.JH569188 631860 2213 + 760995 I e colAng1.NW_012114488v1 15652691 2725 - 23502949 I e canFam3.chr1 56209248 4044 + 122678785 I e chlSab2.chr13 96726883 2555 + 98384682 I e cerAty1.NW_012002071v1 1440763 3093 + 3144229 I e manLeu1.NW_012106474v1 8273297 2628 - 10857215 I e macNem1.NW_012011000v1 8410441 3055 + 10161646 I e rheMac8.chr4 170378017 5456 + 172585720 I e macFas5.chr4 169123169 3595 - 170955103 I a score=2129551.000000 s hg38.chr6_KB021644v2_alt 150060 378 + 185823 ATTGGCACCTGAGCATGACTTCTGCCTACAGAGGTAGGAGCATTGCAGCAGGCAGAGGCCGGCTGCACTGGTGGCTTCAGCGGGGACAGGAGAGGACTCAGGAGTGGCCCC-AGGGATCACCCACAAGCACATATAAAATGGCTTTCAGGACTTCCAGCAACAGTCCAGGGAGGGGATGCTTTATACTGGGAACTAGAACAAGAGAAGTTATCGCTATGTACTGTTTACATACAGCTTTACAACAGGCTCTACTGGCCTGGAGAAAAAGGATAGAAAAGCAAACATACTCATTCATTATTACTTAAGAACAATTCATTCATCGAATCCAAAATATTCACAGAGCAGCAGCTGTGACAAAGCTGATCTGGGTGTCCCTGT s panTro5.chr6 173606824 378 + 175400573 ATTGGCACCTGAGCATGACTTCTGCCTACAGAGGTAGGAGCATTGCAGCAGGCAGAGGCCGGCTGCACTGGTGGCTTCAGCGGGGACAGGAGAGGACTCCGGAGTGGCCCC-AGGGATCACCCACAAGCACATATAAAATGGCTTTCAGGACTTCCAGCAACAGTCCAGGGAGGGGATGCTTTATACTGGTAACTAGAACAAGAGAAGTTATCACTATGTACTGTTTACATACAGCTTTACAACAGGCTCTACTGGCCTGGAGAAAAAGGATAGAAAAGCAAACATACTCATTCATTATTACTTAAGAACAATTCATTCATTGAATCCAAAATATTCACGGAGCAGCAGCTGTGACAAAGCTGATCTGGGTGTCCCTGT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171840121 378 + 173848474 ATTGGCACCTGAGCATGACTTCTGCCTACAGAGGTAGGAGCATTGCAGCAGGCAGAGGCCGGCTGCACTGGTGGCTTCAGCGGGGACAGGAGAGGACTCCGGAGTGGCCCC-AGGGATCACCCACAAGCACATATAAAATGGCTTTCAGGACTTCCAGCAACAGTCCAGGGAGGGGATGCTTTATACTGGTAACTAGAACAAGAGAACTTATCACTATGTACTGTTTACATACAGCTTTACAACAGGCTCTACTGGCCTGGAGAAAAAGGATAGAAAAGCAAACATACTCATTCATTATTACTTAAGAACAATTCATTCATTGAATCCAAAATATTCACGGAGCAGCAGCTGTGACAAAGCTGATCTGGGTGTCCCTGT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11523226 378 - 12463322 ATTGGCACCTGAGCATGACTTCTGCCTACAGAGGTAGGAGCATTGCAGCAGGCAGAGGCCGGCTGCACTGGTGGCTTCAGTGGGGACAGGAGAGGACTCAGGAGTGGTCCC-AGGGATAACCCACAAGCACATATAAAATGGCTTTCAGGACTTCCAGCAACAGTCCAGGGAGGGGATGCTTTATACTGGTAACTAGAACAAGAGAAGTTATCACTATGTACTGTTTACATACAGCTTTACAACAGGCTCTACTGGCCTGGAGAAAAAGGATAGAAAAGCAAACATACTCATTCATTATTACTTAAGAACAATTCATTCATTGAATCCAAAATATTCATGGAGCAGCAGCTGTGACAAAGCTGATCTGGGTGTCCCTGT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156356019 377 + 157873769 ATTGGCACCTGAGCATGGCTTCTGCCTACAGAGGTAGGAGCATTGAGGCAGGCAGAGGCTGGCTGCACGGGTGGCTTCAACGGGGACAGGAGAGGACTCAGGAGTGGCCCC-AGGGATCACCCACAAGCACATAT-AAATGGCTTTCAGGACTTCCAGCAACAGTCCAGGGAGGGGATGCTTGATACTGGTAACTAGAACAAGAGAAGTTATCACTATGTACTGTTTACGTACACCTTTACAACAGGCTATACTGGCCTGGAGAAAAAGGATAGAAAAGCAAACATACTCATTCATTATTACTTAAGAACAATTCATTCACTGAATCCAAAATATTCATGGAGCAGCAGCTCTGACAAAGCTGATCCGGATGTCCCTGT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170383473 378 + 172585720 ATTGGCACCTGAGCATGGCTTCTGCCTACAGAGGTAGGAGCATTGCGGCAGGCAGAGGCCGGCTGCACTGGTGGTTTCCGCAGGGACAGGAGAGGACTCAGGAGCCGCCCCCAGGGATCACCCACAAGCATGTATAAAATGGCTTTCAGGACTTCCAGAAACAGTCCGGGGAGGGGATGCTTTATACTGGTAACTAGAACAAGAGAAGTTATCATTAT-TACTGTTTACATACAGCTTTACAACAGTCTATACTGGCCTGGAGAAAACAGATAGAAAAGCAAACATACTCATTTATTATTACGTAAGAACAattcattcactgaatcccaaatattcatggagcaccagctgtgacaaagctgctctgggtgTCCCTGT i rheMac8.chr4 I 5456 C 0 s macFas5.chr4 169126764 378 - 170955103 ATTGGCACCTGAGCATGGCTTCTGCCTACAGAGGTAGGAGCATTGCGGCAGGCAGAGGCCGGCTGCACTGGTGGTTTCAGCAGGGACGGGAGAGGACTCAGGAGCCGCCCCCAGGGATCACCCACAAGCATGTATAAAATGGCTTTCAGGACTTCCAGAAACAGTCCGGGGAGGGGATGCTTTATACTGGTAACTAGAACAAGAGAAGTTATCATTAT-TACTGTTTACATACAGCTTTACAACAGGCTATACTGGCCTGGAGAAAACAGATAGAAAAGCAAACATACTCATTTATTATTACGTAAGAACAATTCATTCACTGAATCCCAAATATTCATGGAGCACCAGCTGTGACAAAGCTGCTCTGGGTGTCCCTGT i macFas5.chr4 I 3595 C 0 s macNem1.NW_012011000v1 8413496 378 + 10161646 ATTGGCACCTGAGCATGGCTTCTGCCTACAGAGGTAGGAGCATTGCGGCAGGCAGAGGCCGGCTGCACTGGTGGTTTCAGCAGGGACAGGAGAGGACTCAGGAGCCGCCCCCAGGGATCACCCACAAGCATGTATACAATGGCTTTCAGGACTTCCAGAAACAGTCCGGGGAGGGGATGCTTTATACTGGTAACTAGAACAAGAGAAGTTATCATTAT-TACTGTTTACATACAGCTTTACAACAGGCTATACTGGCCTGGAGAAAACAGATAGAAAAGCAAACATACTCATTTATTATTACGTAAGAACAattcattcactgaatcccaaatattcatggagcaccagctgtgacaaagctgctctgggtgTCCCTGT i macNem1.NW_012011000v1 I 3055 C 0 s cerAty1.NW_012002071v1 1443856 378 + 3144229 ATTGGCACCTGAGCATGGCTTCTGCCTACAGAGGTAGGAGCATTGTGGCAGGCAGAGGCCGGCTGCACTGGTGGCTTCAGCAGGGACAGCAGAGGACTCAGGAGCCACCCCCAGGGATCACCCACAAGCATGTATAAAATGGCTTTCAGGACTTCCAGAAACAGTCCGGGGAGGGGATGCTTTATACTGGTAACTAGAACAAGAGAAGTTATCATTAT-TACTGTTTACATACAGCTTTACAACAGGCTATACTGGCCTGGAGAAAAAGGATAGAAAAGCAAACATACTCATTTATTGTTATGTAAGAACAATTCATTCATTGAATCCCAAATATTCATGGAGCACCAGCTGCGACAAAGCTGGTCTGGGTGTCCCTGT i cerAty1.NW_012002071v1 I 3093 C 0 s chlSab2.chr13 96729438 378 + 98384682 ATTGGCACCTGAGCATGGCTTCTGCCTACAGAGGTAGGCGCATTGCGGCAGGCAGAGGCC-ACCACACTGGTGGCTTCAGCAGGGACAGGGGAGGACTCAGGAGCCGCCCCCAGGGATCACCCACAAGCATGTATAAAATGGCTTTCAGGACTTCCAGAAACAGTCCGGGGAGGGGATGCTTTATACTGGTAACTAGAACAAGAGAAGTTATCATTATGTACTGTCTACATACAGCTTTACAACAGGCTATACTGGCCTGGAGAAAAAGGATAGAAAAGCAAACATACTCATTTATTATTATGTAAGAACAGTTCATTCACTGAATCCCAAATATTCATGGAGCAGCAGCTGTGACAAAGCTGCTCTGGGTGTCCCTGT i chlSab2.chr13 I 2555 C 0 s manLeu1.NW_012106474v1 8275925 378 - 10857215 ATTGGCACCTGAGAGTGGCTTCTGCCTACAGAGGTAGGAGCATTGCGGCAAGCAGAGGCCGGCTGCACTGGTGGCTTCAGCAGGGACAGGAGAGGACTCAGGAGCCGCCCCTAGGGATCACCCACAAGCATGTATAAAATGGCTTTCAGGACTTCCAGAAACAGTCCGGGGAGGGGATGCTTTATACTGGTAACTAGAACAAGAGAAGTTATCATTAT-TACTGTTTACATACAGCTTTACAACAGGCTATACTGGCCTGGAGAAAACAGATAGAAAAGCAAACATACTCATTTATTATTACGTAAGAACAattcattcactgaatcccaaatattcatggagcaccagctgtgacaaagctgctctgggtgTCCCTGT i manLeu1.NW_012106474v1 I 2628 C 0 s colAng1.NW_012114488v1 15655416 379 - 23502949 ATTGGCACCTGAGCATGGCTTCTGCCTACAGAGGTAGGAGCATTGTGGCAGGCAGTGGCCGGCTGCACTGGTGGCTTCAGCAGGGACAGGAGAGGACTCAGGAGTGGCCCCCAGGGATCACCCACAAGCATGTATAAAATGGCTTTCAGGACTTCCGGAAATAGTCCGGGGAGGGGATGCTTTATACTGGTAACTAGAATAAGAGAAGTTATCATTATGTACTGTTTACGTACCACTTTACAAGAGGCTATACTGGCCTGGAGAAAAAGGATAGAAAAGCAAACATACTCATTTATTATTACATAAGAACAattcattcattgaatcccaaatattcatggagcaccagctgtgacaaagctggtctgggtgTCCCTGT i colAng1.NW_012114488v1 I 2725 C 0 e otoGar3.GL873575 10979057 1917 - 12073884 I e saiBol1.JH378287 1338083 0 - 2905041 C e aotNan1.NW_018494782v1 1547070 13 - 1813869 I e cebCap1.NW_016107695v1 1302174 53 - 2164891 I e calJac3.chr4 169937190 0 + 171630274 C e dasNov3.JH569188 631860 2213 + 760995 I e canFam3.chr1 56209248 4044 + 122678785 I a score=-1323.000000 s hg38.chr6_KB021644v2_alt 150438 1 + 185823 T s panTro5.chr6 173607202 1 + 175400573 T i panTro5.chr6 C 0 C 0 s panPan2.chr6 171840499 1 + 173848474 T i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11523604 1 - 12463322 T i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156356396 1 + 157873769 T i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170383851 1 + 172585720 G i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169127142 1 - 170955103 G i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8413874 1 + 10161646 G i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1444234 1 + 3144229 G i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96729816 1 + 98384682 G i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8276303 1 - 10857215 G i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15655795 1 - 23502949 G i colAng1.NW_012114488v1 C 0 C 0 s dasNov3.JH569188 634073 1 + 760995 t i dasNov3.JH569188 I 2213 C 0 e otoGar3.GL873575 10979057 1917 - 12073884 I e saiBol1.JH378287 1338083 0 - 2905041 C e aotNan1.NW_018494782v1 1547070 13 - 1813869 I e cebCap1.NW_016107695v1 1302174 53 - 2164891 I e calJac3.chr4 169937190 0 + 171630274 C e canFam3.chr1 56209248 4044 + 122678785 I a score=1667701.000000 s hg38.chr6_KB021644v2_alt 150439 287 + 185823 AAACGGAAAATCACATATATAAGAAAGCTTAATTTATGGATATAGAAAAAGAGTGAGGGATTTTGTCAA----A--TTTTAAAACATGACTAACAAGTGAAGAGTTTAAAAATACCATTATTCTTGAACAAAATACTACACACCTAAGTAACAAACACG--GGCGGTCATTGCTTGATATATAAGCGTTTCTGTGTTAGCAGATGAC-TGCGTCATACTTTTTGTTTGATGGTCAGA--------AGTGTGTGAAACGGGCACGTG--CTGATTCTCTATTTTGAGGAGGTTTGTGTAATTTGTGT s panTro5.chr6 173607203 287 + 175400573 AAACGGAAAATCACATATATAAGAAAGCTTAATTTATGGATATAGAAAAACAG----GGATTTTGTCAATCAAA--TTTTAAAACATGACTAACAAGTGAAGAGTTTAAAAATACCATTATTCTTGAACAAAATACTACACACCTAAGTAACAAACACG--GGTGGTCATTGCTTGATATATAAGCGTTTCTGTGTTAGCAGATGAC-TGCGTCATACTTTTTCTTTGATGGTCAGA--------AGTGTGTGAAACGGGCACATG--CTGACTCTCTATTTTGAGGAGGTTTGTGTAATTTGTGT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171840500 291 + 173848474 AAACGGAAAATCACATATATAAGAAAGCTTAATTTATGGATATAGAAAAAGAGTGAGGGATTTTGTCAATCAAA--TTTTAAAACATGACTAACAAGTGAAGAGTTTAAAAATACCATTATTCTTGAACAAAATACTACACACCTAAGTAACAAACACG--GGTGGTCATTGCTTGATATATAAGCGTTTCTGTGTTAGCAGATGAC-TGCGTCATACTTTTTCTTTGATGGTCAGA--------AGTGTGTGAAACGGGCACATG--CTGACTCTCTATTTTGAGGAGGTTTGTGTAATTTGTGT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11523605 290 - 12463322 AAACGGAAAATCACATATGTAAGAAAGCTTAATTTATGGATATATAAAAAGAGTGAGGGATTTTGTCAATCAAA--TTTTAAAACATGACTAACAAGTGAAGAGTTTAAAAATACCATTATTCTTGAACAAAATACTACACACCTAAGTAACAAACACG--GGCGGTCATTGCTTGATATATAAGCGTTTCTGTGTTAGCAGATGAC-TGCGTCATACTTTTTCTTTGATGGTCAGA--------AGTGTGTGAAACGGGCACGTG--CTGATTCTCTATTTTGAGGAGGTTTGTGTAATTTGTG- i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156356397 291 + 157873769 AAATGGAAAATCACATATATAAGAAAGCTTAATTTATGGATATAGAAAAAGAGTGAGGGATTTTGTCAATCAAA--TTTTAAAACATGACTAACAAGTGAAGAGTTTAAAAATACCATTATTCTTGAACAAAATACTACACACCTAAGTAACAAACATG--GGCGGTCATTGCTTGATATATAAGCGTTTCTGTGTTAGCAGATGAC-TGCGTCACACTTTTTCTTTTATAATCAGA--------AGTGTGTGAAACTGGCATGCG--CTGATCCTCTGCCTTGAGGAGGTTTGTGTAATTTGTGT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170383852 291 + 172585720 AAATGGAAAACCACATATGTAAGAAAGCTTAATGTATGGATATAGAAGAAGAGTAAGAGATTTTGCCAATCAAA--TTTTAAAACATGACTAACAAGTGAAGAGTTTAAAAACACCATTATTCTTGAACAAAATCCTACACACCTAAATCACAAACATG--GGCAGTCATCGCCTGATATATGAGGTTTTGCGTGTTAGCAGACGAC-TGCGTCGCACTTTTTCTTTTATAGTCAGA--------AGCGTGTGAAATGGGCACACG--CTGATCCTCTGCCTTGAGGAGCTTCGTGTAATTTGTGT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169127143 291 - 170955103 AAATGGAAAACCACATATGTAAGAAAGCTTAATGTATGGATATAGAAGAAGAGTAAGAGATTTTGCCAATCAAA--TTTTAAAACATGACTAACAAGTGAAGAGTTTAAAAACACCATTATTCTTGAACAAAATCCTACACACCTAAATCACAAACATG--GGCAGTCATCGCCTGATATATGAGGTTTTGCGTGTTAGCAGACGAC-TGCGTCGCACTTTTTCTTTTATAGTCAGA--------AGCGTGTGAAACGGGCACACG--CTGATCCTCTGCCTTGAGGAGCTTCGTGTAATTTGTGT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8413875 291 + 10161646 AAATGGAAAACCACATATGTAAGAAAGCTTAATGTATGGATATAGAAGAAGAGTAAGAGATTTTGCCAATCAAA--TTTTAAAACATGACTAACAAGTGAAGAGTTTAAAAACACCATTATTCTTGAACAAAATCCTACACACCTAAATCACAAACATG--GGCAGTCATCACCTGAGATATGAGGTTTTGCGTGTTAGCAGACGAC-TGCGTCGCACTTTTTCTTTTATAGTCAGA--------AGCGTGTGAAACGGGCACACG--CTGATCCTCTGCCTTGAGGAGCTTCGTGTAATTTGTGT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1444235 291 + 3144229 AAACGGAAAACCACATATGTAAGAAAGCTTAATGTATGGATACAGAAGAAGAGTAAGAGATTTTGTCAATCAAA--TTTTAAAACATGACTAACAAGTGAAGAGTTTAAAAACACCATTATTCTTGAACAAAATCCTACACACCTAAATCACAAACATG--GGCAGTCATCGCCTGATATATGAGGTTTTGCGTGTTAGCAGACGAC-TGTGTCACACTTTTTCTTTTATAGTCAGA--------AGCGTGTGAAACGGGCATGCG--CTGATCCTCTGCCTTGAGGAGCTTCGTGAAATTTGTGT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96729817 291 + 98384682 AAACGGAAAACCACATATGTAAGAAAGCTTAATGTATGGATATAGAAGAAGAGTGAGAGATTTTGTCAATCAAA--TTTTAAAACATGACTAACAAGTGAAGAGTTTAAAAATACCATTATTCTTGAACAAAATCCTACACACCTAAATCACAAACATG--GGCAGTCATCGCCTGATATATGAGGTTTTGCATGTTAGCAGACGAC-TGCGTCACACTTTTTCTTTTATAGTCAGA--------AGCGTGTGAAACGGGCATGCG--CTGATCCTCTGCCTTGAGGAGCTTCGTGAAATTTGTGT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8276304 291 - 10857215 AAATGGAAAACCACATATGTAAGAAAGCTTAATGTATGGATATAGAAGAAGAGTAAGAGATTTTGCCAATCAAA--TTTTAAAACATGACTAACAAGTGAAGAGTTTAAAAACACCATTATTCTTGAACAAAATCCTACACACCTAAATCACAAACATG--GGCAGTCATCGCCTGATATATGAGGTTTTGCGTGTTAGCAGATGAC-TGTGTCGCACTTTTTCTTTTATAGTCAGA--------AGCGTGTGAAACGGGCACACG--CTGATCCTCTGCCTTGAGGAGCTTCGTGTGATTTGTGT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15655796 299 - 23502949 AAATGGAAAACCACATATATAAGAAAGCTTAATGTATGGATATAGAAGAAGAGTGAGAGATTTTGTCAATCAAA--TTTTAAAACATGAATAACAAGTGAAGAGTTTAAAAATACCTTTATTCTTGAACAAAATCCTACACACCCAAATCACAAACATG--GGAAGTCATCGCCTGATATATGAGGTTTTGCGTGTTAGCAGACGAC-TGTGTCGCGCTTTTTCTTTTATAGTCAGAAGCGTGTGAGCGTGTGAAACGGGCACGCG--CTGATCCTCTGCCTTGAGGAGCTTCGTGAAGTTTGTGT i colAng1.NW_012114488v1 C 0 C 0 s otoGar3.GL873575 10980974 237 - 12073884 AGACAGAAACTCAAATGCATGAG-------GGTAAGTGGGCA-GGAAGAACAGTGGGCGATCTGGT--ATCAAAATTTTTGAAAGACGACTAAAAA--GAGGAGTTTTAAAATGCTGTTGTGA-CGTATGAAATGCTGCCCACCTAAATAACGCGAACG--GCCTGCTCATTCTTGAAAC---AGGCTCTCTGTGCCTGC---------------------------------------------AGCCCATGACACG----TGTT--CTGAGCCTCCATCTTGAAGAACAGGGTGTAATTTTCAT i otoGar3.GL873575 I 1917 C 0 s dasNov3.JH569188 634074 288 + 760995 aaacagaaaatccaataggtaagaaagt---acatatggatagagataTCCA-CATATGATTTGGTCAAC---A--ATTTAAAACATGGCTAACTTAAGTCGAGTTTTAAAATATCATGCATATTGCACAAAATACTATCCAGCTAAATAACACAAGTGTTAATATTTATTCTTTGATACATACACTTCTTGATGTAAGAAGATGACTTGTGTAATTTTATTCCTCTTATAGTCAAA--------AGGTCATGGAGCAGATAAGTGTTCTAATTCTCTGTATTGAGGAATTTAGCTTAATTT-TAT i dasNov3.JH569188 C 0 C 0 e saiBol1.JH378287 1338083 0 - 2905041 C e aotNan1.NW_018494782v1 1547070 13 - 1813869 I e cebCap1.NW_016107695v1 1302174 53 - 2164891 I e calJac3.chr4 169937190 0 + 171630274 C e canFam3.chr1 56209248 4044 + 122678785 I a score=24949.000000 s hg38.chr6_KB021644v2_alt 150726 6 + 185823 --TGTCAT s panTro5.chr6 173607490 6 + 175400573 --TGTGAT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171840791 6 + 173848474 --TGTGAT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11523895 5 - 12463322 ---GTGAT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156356688 6 + 157873769 --TGTGAT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170384143 6 + 172585720 --TATGAT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169127434 6 - 170955103 --TATGAT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8414166 6 + 10161646 --TATGAT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1444526 6 + 3144229 --TATGAT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96730108 6 + 98384682 --TATGAT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8276595 6 - 10857215 --TATGAT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15656095 6 - 23502949 --TATGAT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169937190 6 + 171630274 --TGTGGC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1338083 6 - 2905041 --tgtggc i saiBol1.JH378287 C 0 C 0 s otoGar3.GL873575 10981211 6 - 12073884 --TGTAAC i otoGar3.GL873575 C 0 C 0 s dasNov3.JH569188 634362 5 + 760995 TTTAC--- i dasNov3.JH569188 C 0 C 0 e aotNan1.NW_018494782v1 1547070 13 - 1813869 I e cebCap1.NW_016107695v1 1302174 53 - 2164891 I e canFam3.chr1 56209248 4044 + 122678785 I a score=64090.000000 s hg38.chr6_KB021644v2_alt 150732 9 + 185823 GTTGCTCTG s panTro5.chr6 173607496 9 + 175400573 GTTGCTCTG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171840797 9 + 173848474 GTTGCTCTG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11523900 9 - 12463322 GTTGCTCTG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156356694 9 + 157873769 GTTGCTGTG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170384149 9 + 172585720 GTCGCTCTG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169127440 9 - 170955103 GTCGCTCTG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8414172 9 + 10161646 GTCGCTCTG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1444532 9 + 3144229 GTCACTCTG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96730114 9 + 98384682 GTCACTCTG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8276601 9 - 10857215 GTCGCTCTG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15656101 9 - 23502949 GTCGCTCTG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169937196 9 + 171630274 ATTGCTCGT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1338089 9 - 2905041 attgctctT i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1302227 9 - 2164891 GTTGCTCTT i cebCap1.NW_016107695v1 I 53 C 0 s otoGar3.GL873575 10981217 9 - 12073884 ATTAATTTT i otoGar3.GL873575 C 0 C 0 s dasNov3.JH569188 634367 9 + 760995 TTTACTTGA i dasNov3.JH569188 C 0 C 0 e aotNan1.NW_018494782v1 1547070 13 - 1813869 I e canFam3.chr1 56209248 4044 + 122678785 I a score=841069.000000 s hg38.chr6_KB021644v2_alt 150741 80 + 185823 AAGCCCTCTGAGATGAGCCTGGGAGGTGTTGCCTTGGTGCACAGAGACATGTCACAGTGTAGACTGTGGCCCTCCCACGT s panTro5.chr6 173607505 80 + 175400573 AAGCCCTCTGAGATGAGCCTGGGAGGTGTTGTCTTGGTGCACAGAGACGCGTCACAGTGTAGACTGTGGCCCTCCCACGT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171840806 80 + 173848474 AAGCCCTCTGAGATGAGCCTGGGAGGTGTTGTCTTGGTGCACAGAGACGCGTCACAGTGTAGACTGTGGCCCTCCCACGT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11523909 78 - 12463322 AAGCCCTCTGAGATGAACCTGGGAG--GTTGCCTTGGTGCACAGAGACGCGTCACAGTGTAGACTGTGGCCCTCCCATGT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156356703 80 + 157873769 AAGCCCTCTGAGATGGGCCTGGGAGGTGTTGCCTTGGTGCACAGAGACGCGTCACAGTGTAGACTGTGGCCGTCCCACGT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170384158 80 + 172585720 AAGCCCTCTGAGATGAGCCTGGGAGGTGTTGCCTGGGTGCACAGAGACGCGTCACAGTGTAGACCGTGGCCCTCCCAAGT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169127449 80 - 170955103 AAGCCCTCTGAGATGAACCTGGGAGGTGTTGCCTGGGTGCACAGAGACGCGTCACAGTGTAGACCGTGGCCCTCCCAAGT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8414181 80 + 10161646 AAGCCCTCTGAGATGAGCCTGGGAGGTGTTGCCTGGGTGCACAGAGACGCGTCACAGTGTAGACCGTGGCCCTCCCAAGT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1444541 80 + 3144229 AAGCCCTCTGAGATGAGCCTGGGAGGTGTTGCCTGGGTGCACAGAGACGCGTCACAGTGTAGACCGTGGCCCTCCCAAGT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96730123 80 + 98384682 AAGCCCTCTGAGATGAGCCTGGGAGGTGTTGCCTGGGTACACAGAGACGCGTCACAGTGTAGACTGTGGCCCTCCCAAGT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8276610 80 - 10857215 AAGCCCTCTGAGATGAGCCTGGGAGGTGTTGCCTGGGTGCACAGAGACGCGTCACAGTGTAGACCGTGGCCCTCCCAAGT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15656110 80 - 23502949 AAGCCCTCGGAGATGAGCCTGGGAGGTGTTGCCTGGGTGCACAGAGACGCGTCACAGTGTAGACCGTGGCCCTCCCGAGT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169937205 62 + 171630274 AAGCCCTCCAAGGTGAGTCTGGGAGGTGTTACCTGAGTGCAT------------------AGACCGTGGCCCTCCCATGT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1338098 80 - 2905041 AAGCCCTCTGAGATGAGTCTGGGAGACGTCGCCTGAGTGCACAGAGACACATCACAGTGAAGACCGTGGCCCTCCCACGT i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1302236 80 - 2164891 AAGCCCTCTGAGATGAGTCTGGGAGATGTTACCTGAGTGCACAGAGACACGTGACAGTGTAGACCATGGCCGTCCCACGT i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1547083 78 - 1813869 AAGCCCTCTGAGAT--GTCTGGGAGATGTTACCTGAGTACAGAGAGACACGTCACAGTGTAGACCGTGGCCCTCCCACGT i aotNan1.NW_018494782v1 I 13 C 0 s otoGar3.GL873575 10981226 75 - 12073884 AAGTTCTCTGAGAAGAGTCCGGGGTGTGTTTTCTGGGTGTGGGGAGACA-GTCGGAATGTAGAC----GCTCACCCCAGC i otoGar3.GL873575 C 0 C 0 s dasNov3.JH569188 634376 80 + 760995 AACTCCTCTGAGATGTGTCTGAGATACATTGTCTGAACACATGGAGATGCCTCGAAATGTAGACTATTATCAAACCATGT i dasNov3.JH569188 C 0 I 1462 e canFam3.chr1 56209248 4044 + 122678785 I a score=852837.000000 s hg38.chr6_KB021644v2_alt 150821 98 + 185823 TGATTCAGGGGTGCTGCGGCAGGCGTGTGGAGGGGACCCCACGCAGGAGCACCTCCTCATCCCTGAGGAGCTGGGGGACTCCTGGCAGATGCAGCCCC s panTro5.chr6 173607585 98 + 175400573 TGATTCAGGGGTGCTGTGGCAGGCGTGTGGAGGGGACCCCACGCAGGAGCACCTCCTCATCCCTGAGGAGCTGGGGGACTCCTGGCAGATGCAGCCCC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171840886 98 + 173848474 TGATTCAGGGGTGCTGTGGCAGGCGTGTGGAGGGGACCCCACGCAGGAGCACCTCCTCATCCCTGAGGAGCTGGGGGACTCCTGGCAGATGCAGCCCC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11523987 98 - 12463322 TGATTCAGGGGTGCTGCGGCAGGCGTGTGGAGGGGACCCCAGGCAGGAGCGCCTCCTCATCCCTGAGGAGCTGGGGGACTCCTGGCAGATGCAGCCCC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156356783 98 + 157873769 TGAGTCAGGGGTGCTGCGGCAGGCGTGTGGAGGGGACCCCACGCAGAAGCACATCCTCATCCCTGAGGAGCTGGGGGACTCCGGGCAGACGAAGCACC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170384238 98 + 172585720 CGAGTCAGGGGTGCTGCTGCAGGCATGTGGAGGGGACCCCATGCAGGAGCGCGTCATCATCCCTGGGGAGCTGGGGGACTCCTGGCAGACGCAGCCCC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169127529 98 - 170955103 CGAGTCAGGGGTGCTGCTGCAGGCATGTGGAGGGGACCCCATGCAGGTGAGCGTCATCATCCCTGGGGAGCTGGGGGACTCCTGGCAGACGCAGCCCC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8414261 98 + 10161646 CGAGTCAGGGGTGCTGCTGCAGGCATGTGGAGGGGACCCCATGCAGGAGCGCGTCATCATCCCTGGGGAGCTGGGGGACTCCTGGCAGACGCAGCCCC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1444621 98 + 3144229 CGAGTCAGGGGTGCTGCTGCAGGCATGTGGAGGGGACCCCATGCAGGAGCGCGTCATCATCCCTGGGGACCTGGGGGACTCCTGGCAGACGCAGCCCC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96730203 97 + 98384682 CGAGTCAGGGGTGCTGCTGCAGG-GTGTGGAGGGGACCCCATGCAGGAGCGCGTCATCATCCCTGGGGACCTGGGGGACTCCTGGCAGACGCAGCCCC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8276690 98 - 10857215 TGAGTCAGGGGTGCTGCTGCAGGTATGTGGAGGGGACCCCATGCAGGAGCGCGTCATCATCCCTGGGGAGCTGGGGGACTCCTGGCAGACGCAGCCCC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15656190 95 - 23502949 CGAGTC-GGGGTGCTGCTGCAGG-GTGTGGAGGGGACCCCATGCAGGAGTGTGTCATCATCCC-GGGGAGCTGGGGGACTCCTGGCAGATGCAGCCCC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169937267 97 + 171630274 CAGGTCTGGGATGCTGCTGCAGGTGCGTGGAGGGGACCCCATGCAGGAGTGTGTCCTCATTCCTGGAGAGGCAGGGAACTCCT-GCAGACACAGCCCC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1338178 97 - 2905041 CGAGTCTGGGGCGCTGCTTCGGGCGTGTGGAGGGGACCCCACGCAGAAGCGCATCCTCATCCCTAGGGAGGCGGGGGACTCCT-GCAGACACAGCCCC i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1302316 97 - 2164891 CAAGTCTGGGGCGCTGCTGCGGGCGTGTGGAGGGGACCCCACGCAGGAGCGTGTCCTCATCCCTGGGGAGGCGGGGGACTCCT-GCAGACACAGCCCC i cebCap1.NW_016107695v1 C 0 I 56 s aotNan1.NW_018494782v1 1547161 97 - 1813869 CGAGTCTGCGGCGCTGCTGCGGGCGTGTGGAGGGGACCCCACGCAGGAGCTTGTCCTCAAGCCT-GGGAGGCGGGAGGCTCCTGGCAGACGCAGCCCC i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10981301 42 - 12073884 --AGCCGGGAACGCTCCTGCAGG----------GGTCCCCAGACGGA-------------------------------------GCAGCTA------- i otoGar3.GL873575 C 0 C 0 e dasNov3.JH569188 634456 1462 + 760995 I e canFam3.chr1 56209248 4044 + 122678785 I a score=42720.000000 s hg38.chr6_KB021644v2_alt 150919 15 + 185823 A-------------------------------------------------------------------------CCAAGCTGCCCTGG s panTro5.chr6 173607683 15 + 175400573 A-------------------------------------------------------------------------CCAAGCTGCCCTGG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171840984 15 + 173848474 A-------------------------------------------------------------------------CCAAGCTGCCCTGG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11524085 15 - 12463322 A-------------------------------------------------------------------------CCAAGCTGCCCTGG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156356881 15 + 157873769 A-------------------------------------------------------------------------CCAAGCTGCCCTGG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170384336 15 + 172585720 A-------------------------------------------------------------------------CGAAGCTGTCCTTG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169127627 15 - 170955103 A-------------------------------------------------------------------------CGAAGCTGTCCTTG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8414359 15 + 10161646 A-------------------------------------------------------------------------CGAAGCTGTCCTTG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1444719 15 + 3144229 A-------------------------------------------------------------------------CCAAGCTGCCCTTG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96730300 15 + 98384682 A-------------------------------------------------------------------------CCAAGCTGCCCTTG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8276788 15 - 10857215 A-------------------------------------------------------------------------CAAAGCTGTCCTTG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15656285 15 - 23502949 A-------------------------------------------------------------------------CCAAGCTGCCCTTG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169937364 88 + 171630274 ACCGTGGAGGGGACCGGAAGCAAGAGCGTGTCCTCAAGCCTGGGAGGTGGGAGACTCCTAGCAGACAAAGTCCCCCAAGGGGCCCTTG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1338275 88 - 2905041 ACGGTGGAGGGGACCCGACACAAGAACGCATCCTCAAGCCTGGGAGGCGGGGGACTCCTGGCAGACACAGCCCCCCCAGGGGCCCTTG i saiBol1.JH378287 C 0 C 0 s aotNan1.NW_018494782v1 1547258 14 - 1813869 --------------------------------------------------------------------------CCGAGGGGCCCTTG i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10981343 0 - 12073884 C e cebCap1.NW_016107695v1 1302413 56 - 2164891 I e dasNov3.JH569188 634456 1462 + 760995 I e canFam3.chr1 56209248 4044 + 122678785 I a score=343698.000000 s hg38.chr6_KB021644v2_alt 150934 47 + 185823 GGCCCCACAGTGCCCGGTGTCCGGCTTCAGACAGACAAGCAGCTGTC s panTro5.chr6 173607698 47 + 175400573 GGCCCCACAGTGCTCGGTGTCCGGCTTCAGACAGACAAGCAGCTGTC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171840999 47 + 173848474 GGCCCCACAGTGCTCGGTGTCCGGCTTCAGACAGACAAGCAGCTGTC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11524100 47 - 12463322 GGCCCCACAGTGCTCGGTGTCCGGCTTCAGACAGACAAGCAGCTGTC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156356896 47 + 157873769 GGCCCCACAGTGCTCGGTGTCTGGCTTCAGACAGACAAGCAGCTGTC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170384351 47 + 172585720 GGCCCCCCAGTGCTCGGTGTCCGGCTTCAGATAGACAAGCAGCTGTG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169127642 47 - 170955103 GGCCCCCCAGTGCTCGGTGTCCGGCTTCAGATAGACAGGCAGCTGTG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8414374 47 + 10161646 GGCCCCCCAGTGCTCGGTGTCCGGCTTCAGATAGACAAGCAGCTGTG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1444734 47 + 3144229 GGCCCCCCAGTGCTCGGTTTCCGGCTTCAGATAGACAAGCAGCCATC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96730315 47 + 98384682 GGCCCCCCAGTGCTCGGTGTCCCGCTTCAGATAGACAAGCAGCTGTC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8276803 47 - 10857215 GGCCCCCCAGTGCTCGGTGTCCGGCTTCAGATAGACAAGCAGCTGTC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15656300 47 - 23502949 GGCCCCCCAGTGTTCGGTGTCCGGCTTCAGATAGACAAGCAGCTGTC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169937452 42 + 171630274 GGCCCGACAGTGCTGGGTA--CAGCTTCAGATAGACAGGCACTG--- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1338363 42 - 2905041 GGCCTGACAGTGCGGGGTA--CAGCTTCAGATAGACAGGCACCG--- i saiBol1.JH378287 C 0 C 0 s aotNan1.NW_018494782v1 1547272 42 - 1813869 GGCCCGACAGTGCTGGGTA--CAGCTTCAGATAGACAGGCACCG--- i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10981343 28 - 12073884 -----------GCCCGTCACCCAGC-------AGACAA-CAGACGTC i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56213292 47 + 122678785 GGTCCCAACATATTCGGTAGATGGTTCTGAATAGACCAACAAATGTC i canFam3.chr1 I 4044 C 0 e cebCap1.NW_016107695v1 1302413 56 - 2164891 I e dasNov3.JH569188 634456 1462 + 760995 I a score=66466.000000 s hg38.chr6_KB021644v2_alt 150981 10 + 185823 CTATCGCTTC s panTro5.chr6 173607745 10 + 175400573 CTATCGCTTC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171841046 10 + 173848474 CTATCGCTTC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11524147 10 - 12463322 CTATCGTTTC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156356943 10 + 157873769 CTATCGCTTC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170384398 10 + 172585720 CTATCGCTTC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169127689 10 - 170955103 CTATCGCTTC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8414421 10 + 10161646 CTATCGCTTC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1444781 10 + 3144229 CTATCGCTTC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96730362 10 + 98384682 CTATCGCTTC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8276850 10 - 10857215 CTATCGCTTC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15656347 10 - 23502949 CTATTGCTTC i colAng1.NW_012114488v1 C 0 C 0 s otoGar3.GL873575 10981371 10 - 12073884 TCTTCGCTTT i otoGar3.GL873575 C 0 I 4 s canFam3.chr1 56213339 10 + 122678785 ATTTTACCTG i canFam3.chr1 C 0 I 1 s dasNov3.JH569188 635918 10 + 760995 CTTTTGTTCT i dasNov3.JH569188 I 1462 C 0 e saiBol1.JH378287 1338405 0 - 2905041 C e aotNan1.NW_018494782v1 1547314 0 - 1813869 C e cebCap1.NW_016107695v1 1302413 56 - 2164891 I e calJac3.chr4 169937494 0 + 171630274 C a score=2040817.000000 s hg38.chr6_KB021644v2_alt 150991 165 + 185823 CTCTTATTTTTAAGCCACTGCTTGA--ATGC-TTCGTACTCATATAAAGGATCTCTGACATTGCTTTTCAGAATCGAGGAATTTCTTCATATCCTATGGCTTAGATTTTGCCAGATCAGAGGAAAATTGTGG-CCACCCTGGGCAGACC---------------TATTCCTGGAAATGGCCTTT s panTro5.chr6 173607755 165 + 175400573 CTCTTATTTTTAAGCCACTGCTTGA--ATGC-TTCGTACTCATATAAAGGATCTCTGACATTGCTCTTCAGAATCGAGGAATTTCTTCATATCCTATGGCTTAGATTTTGCCAGATCAGAGGAAAATTGTGG-CCACCCTGGGCAGAGC---------------TATTCCTGGAAATGGCCTTT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171841056 165 + 173848474 CTCTTATTTTTAAGCCACTGCTTGA--ATGC-TTCGTACTCATATAAAGGATCTCTGACATTGCTCTTCAGAATCGAGGAATTTCTTCATATCCTATGGCTTAGATTTTGCCAGATCAGAGGAAAATTGTGG-CCACCCTGGGCAGAGC---------------TATTCCTGGAAATGGCCTTT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11524157 165 - 12463322 CTCTTATTTTTAAGCCACTGCTTGA--ATGC-TTCGTACTCATATAAAGGATCTCTGACATTGCTTTTCAGAATCGAGGAATTTCTTCATATCCTATGGCTTAGATTTTGCCAGATCAGAGGAAAATTGTGG-CCACCCCGGGCAGAGC---------------TATTCCTGGAAATGGCCTTT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156356953 165 + 157873769 CTCTTATTTCTGAGCCACTGCTTGA--ATGC-TTCGTACTTATATAAAGGATCTCTGACATTGCTTTTAAGAATCGAGGAATTTCTTCATATCCTATGGCTTAGATTTTGCCAGATCAGAGGAAAATTGTGG-CCACCCTGGGCAGACC---------------TATTCCTGGAAATGGCCTTT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170384408 165 + 172585720 CTCTTATTTCTAAGCCACTGCTTGA--ATGC-TTCTTACTCATATAAAGGATTTCTGACATTGCTTTTCAGAATCGAGGAATTTCTTCATATCCTATGGCTTAGATTTTGCCAGATCAAAGGAAAATTGTGG-CCACCCAGGGCAGGCC---------------TATTCCCGGAAATGGCCTTT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169127699 165 - 170955103 CTCTTATTTCTAAGCCACTGCTTGA--ATGC-TTCTTACTCATATAAAGGATTTCTGACATTGCTTTTCAGAATCGAGGAATTTCTTCATATCCTATGGCTTAGATTTTGCCAGATCAGAGGAAAATTGTGG-CCACCCAGGGCAGGCC---------------TATTCCCGGAAATGGCCTTT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8414431 165 + 10161646 CTCTTATTTCTAAGCCACTGCTCGA--ATGC-TTCTTATTCATATAAAGGATTTCTGACATTGCTTTTCAGAATCGAGGAATTTCTTCATATCCTATGGCTTAGATTTTGCCAGATCAGAGGAAAATTGTGG-CCACCCAGGGCAGGCC---------------TATTCCCGGAAATGGCCTTT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1444791 165 + 3144229 CTCTTATTTCTAAGCCACTGCTTGA--ATGC-TTCTTACTCATATAAAGGATTTCTGACATTGCTTTTCAGAATCGAGGAATTTCTTCATATCCTATGGCTTAGATTTTGCCAGATCAGAGGAAAATTGTGG-CCACCCAGGGCAGGCC---------------TATTCCCGGAAATGGCCTTT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96730372 165 + 98384682 CTCTTATTTCTAAGCCACTGTTTGA--ATGC-TTGTTACTCATATAAAGGATTTCTGACATTGCTTTTCAGAATCGAGGAATTTCTTCATATCCTATGGCTTAGATTTTGCCAGATCAGAGGAAAATTGTGG-CCACCCAGGGCAGGCC---------------TATTCCCGGAAATGGCCTTT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8276860 165 - 10857215 CTCTTATTTCTAAGCCACTGCTTGA--ATGC-TTCTTACTCATATAAAGGATTTCTGACATCGCTTTTCAGAATCGAGGAATTTCTTCATATCCTATGGCTTAGATTTTGCCAGATCAGAGGAAAATTGTGG-CCACCCAGGGCAGGCC---------------TATTCCCGGGAATGGCCTTT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15656357 165 - 23502949 CTCTTCTTTCTAAGCCACTGCTTGA--ATGC-TTCTTACTCATATAAAGGATTTCTGACATTGCTTTTCAGAATCGAGGAATTTCTTCATATCCTATGGCTTAGATTTTGCCAGATCAGAGGAAAATTGTGG-CCACCCAGGGCAGGCC---------------TGTTCCCGGAAATGGCCTTT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169937494 166 + 171630274 CTCTTATTTCTAAGCCACCGCTTGG--ATGC-TTCTCACCAATATGATGGATCTCTGACCTTTTTTTTCAGAGCTGAGGAATTTCTTCCTATCCTATGGGTTAAATTCCGCCCAATCAGAGGAAAATTGTGGCCCCCCCTGGGCCGACC---------------TATTCCTGGAAATGGCCTTT i calJac3.chr4 C 0 I 468 s saiBol1.JH378287 1338405 165 - 2905041 CTCTTATTTCTAAGCCACTGCTTGG--ATGC-TTCTCACCAATATAATGGATCTCTGACATTGTTTTTCAGAGTTGAGGAATTTCTTCATATCCTATGGCTTAGATTCTGCCAAATCAGAGGAAAATTGTGG-CCACCCTGGGCAGACC---------------TATTCCTGGAAATGGTCTTT i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1302469 165 - 2164891 CTCTTATTTCTAAGCCACCGCTTGG--ATGC-TTCTCACCAATGTAATGGACCTCTGACATTGTTTTTCAGAGTTGAGGAATTTCTTCATATCCTATGGCTTAGATTCTGCCAAATCAGAGGAAAATTGTGG-CCACCCTGGGCAGACC---------------TATTCCTGGAAATGGTCTTT i cebCap1.NW_016107695v1 I 56 C 0 s aotNan1.NW_018494782v1 1547314 164 - 1813869 CTCTCATTTCTAAGCCACCGTTTGG--ATGC-TTCTCACCAATATAATGTATCTCTGACGTTGTTTTTCAGAGTTGAGGAATTTCTTCATATCCTATGGCTTAGATTCTGCCAAATCAGGGGAGCACTGTGG-CCGCCCTGGGT-GACC---------------TATTCCTGGAAATGGTCTTT i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10981385 165 - 12073884 TCTGTATTAATAAGTAACTGCTTGA--ACAC-GTTTTACCAGGATAAACTACCTTTGACACTGTTTTTCACAACTGAGGAATTTCTTCATATCCTATGGTTTAGATTTTGCTGCATCAGAGGAAAATTGTGG-CCACCCTGGGCAGGCC---------------CGTTCCTGGAAATAGCCTTT i otoGar3.GL873575 I 4 C 0 s canFam3.chr1 56213350 161 + 122678785 CAGTTTTGTCTAAATAACATTTTGA--AAACTTTTTTATCCTTATAAGCCATCTTTGACGTTATTTTTCAGAATGGAGGAATTTCTTCACGTCCTGTGGTTTCGACTTCGTCAGCTCAG-GGAAGATTGTGG-CCACCCTGGGCAGACC---------------CAGCCCTGGGGACGGC---- i canFam3.chr1 I 1 C 0 s dasNov3.JH569188 635928 182 + 760995 GCCTACTTTTTATGTAACTGATTGACTATTC-TTTTTGCCCATATAAACCATCTTTGCCATTACTTTTTGGAGTTGAGTAACTTCTTCATGTTCTATGGTTTGGATTTCATCAGATCAGAGGAAAACTGTGG-CCACCTTGGGTAGACCCATGCAAAAAGTAAGCATTCCTGGAGATGGCCATT i dasNov3.JH569188 C 0 C 0 a score=4427422.000000 s hg38.chr6_KB021644v2_alt 151156 437 + 185823 GCCAGTGGCGAGATCTCTAATCCACAGGCATTCCGGCTGCCAAATTCCTGGCCTTTGAAGGCTGCAGCTGG-GGAAAAGCCACTCTGCATCAGTTCATGTTTCTTTTTCAAAC--TTTCCCC-TTCTATTATTTCACAACCAAACTCTGCCAGGGCCTGGCTTTTAGTTATTAAAGGGCC--AAGCATCATTTTT---TTCCAATGCTTTTAAAAAGGAGGGGAAGGGTTTCCCAG-AGATAC-GTGGTGCCTT---------CCCCGTGCACACA-------GATG--CT-------------CCAGAATCACAGCCGCCTTCTATGAACTCTCGTGC-AGGGCCT-CATCTTCCATGGTTAATTTAGCAATAGGGATTGTGTGCT-TCAAAGCGATACCTCATTCCTAGGTAGAAATTTATTTAACTTCAAAAACCTTTATTGTTGAATATATTAAGAACTACGTCTTAGTGATGATGAT s panTro5.chr6 173607920 439 + 175400573 GCCAGTGGCGAGATCTCTAATCCACAGGCCTTCCTGCTGCCAAATTCCTGGCCTTTGAAGCCTGCAGCTGG-GGAAAAGCCACTCTGCATCAGTTCATGTTTCTTTTTCAAACTTTTTCCCC-TTCTATTATTTCAAAACCAAACTCTGCCAGGGCCTGGCTTTTAGTTATTAAAGGGCC--AAGCATCATTTTT---TTCCAATGCTTTTAAAAAGGAGGGGAAGGGTTTCCCAG-AGATAC-GTGGTGCCTT---------CCCCTTGCACACA-------GATG--CT-------------CCAGAATCACAGCCACCTTCTATGAACTCTCGTGC-AGGGCCT-CATCTTCCATGGTTAATTTAGCAATAGGGATTGTGTGCT-TCAAAGCGATACCTCATTCCTAGGTAGAAATTTATTTAACTTCAAAAACCTTTGTTATTGAATATATTAAGAACTACGTCTTAGTGATGATGAT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171841221 439 + 173848474 GCCAGTGGCGAGATCTCTAATCCACAGGCCTTCCTGCTGCCAAATTCCTGGCCTTTGAAGCCTGCAGCTGG-GGAAAAGCCACTCTGCATCAGTTCATGTTTCTTTTTCAAACTTTTTCCCC-TTCTATTATTTCACAACCAAACTCTGCCAGGGCCTGGCTTTTAGTTATTAAAGGGCC--AAGCATCATTTTT---TTCCAATGCTTTTAAAAAGGAGGGGAAGGGTTTCCCAG-AGATAC-GTGGTGCCTT---------CCCCGTGCACACA-------GACG--CT-------------CCAGAATCACAGCCACCTTCTATGAACTCTCGTAC-AGGGCCT-CATCTTCCATGGTTAATTTAGCAATAGGGATTGTGTGCT-TCAAAGCGATACCTCATTCCTAGGTAGAAATTTATTTAACTTCAAAAACCTTTGTTATTGAATATATTAAGAACTACGTCTTAGTGATGATGAT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11524322 436 - 12463322 GCCAGTGGCGAGATCTCTAATCCACAGGCCTTCCTGCTGCCAAATTCCTGGCCTTTGAAGCCTGCAGCTGG-GGAAAAGCCACTCTGCATCAGTTCATGTTTCTTTTTCAAACTTTTTCCCC-TTCTATTATTTCACAACCAAACTCTGCCAGGGCCTGGCTTTTAGTTATTAAAGGGCC--AAGCATCATTTTT---TTCCAATGCTTTTAAAAAGGAGGGGAAGGGTTTCCCAG-AGATAC-GTGGTGCCTT---------CCCCGTGCACACA-------GACG--CT-------------CCAGAATCACAGCCGCCTTCTATGAACTCTCGTGC-AGGGCCT-CATCTTCCATGGTTAATTTAGCAATAGGGATTGTGTGCT-TCAAAGCGATACCTCATTCCTAGGTAGAAATTTATTTAACTTCAAAAACCTTTGTTGTTGAATATATTAAGAACTACGTCTTAG---TGATGAT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156357118 439 + 157873769 GCCAGTGGCGAGATCTCTAATCCACAGGCCTTCCTGCTGCCAAATTCCTGGCCTTTGAAGCCTGCAGCTGG-GGAAAAGCCACTCTGCATCAGTTCATGTTTCTTTTTCAAACTTTTTCCCC-TTCTGTTATTTCACAACCAAACTCTGCCAGGGCCTGGCTTTTAGTTATTAAAGGGCC--AAGCATCATTTTT---TTCCAATGCTTTTAAAAAGGAGAGGAAGAGTTTCCCAG-AGATAC-GTGGTGCCTT---------CCCCGTGCACACA-------GACG--CT-------------GCAGAATCACAGCTGCCTTCTATGAACTCTCGTGC-AGGGCCT-CATCTTCCATGGTTAGTTTAGCAATAGGGATTGTGTGCT-TCAAAGCAATACCTCATTCCTAGGTAGAAATTTATTTAACTTCAAAAACCTTTATTGTTGAATATATTAAGAACTACGTCTTTGTGATGATGAT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170384573 437 + 172585720 GCCAGTCGCGAGATCCCTAATCCACAGGCCTCCCTGCTGCCAAATTCCTGGCTTTTGAAGCCTGCTGCTGG-GGAAAAGCCACTCTGCATCAGTTAATGTTTCTTTTTCAAACTTTTTCCCC-TTCTATTATTTCACAACCAAACTCTGCCAGGGCTTGGCTTTGAGTTATTAAAGGGCCAAAAGCATCATTTTC---TTCAGATGCTTTTAAAGAGGAGGGGAAGGGTTTCCCAG-AGATAT-GTGGTGCCTT---------CCCCGTGCAC-----------ATG--TT-------------CCAAAATCAAAGCAGCCTTCTATGAACTCTCGTGC-AGGGCCT-CATCTTCCATGGTTAATTTAGCAATAGGGATCGTGTGCT-TCAAAGCAATACCTCATTCCTAGGGAGAAATTTATTTAACCTCAGGAAACTTTATTGCTGAATATATTAAGAACTACATGTTCGTGATGATGAT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169127864 437 - 170955103 GCCAGTCGCGAGATCTCTAATCCACAGGCCTCCCTGCTGCCAAATTCCTGGCTTTTGAAGCCTGCTGCTGG-GGAAAAGCCACTCTGCATCAGTTAATGTGTCTTTTTCAAACTTTTTCCCC-TTCTATTATTTCACAACCAAACTCTGCCAGGGCTTGGCTTTGAGTTATTAAAGGGCCAAAAGCATCATTTTC---TTCAGATGCTTTTAAAGAGGAGGGGAAGGGTTTCCCAG-AGATAT-GTGGTGCCTT---------CCCCGTGTAC-----------ATG--TT-------------CCAAAATCAAAGCAGCCTTCTATGAACTCTCGTGC-AGGGCCT-CATCTTCCATGGTTAATTTAGCAATAGGGATCGTGTGCT-TCAAAGCAATACCTCATTCCTAGGGAGAAATTTATTTAACCTCAGGAAACTTTATTGCTGAATATATTAAGAACtacatgttcgtgatgatgat i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8414596 437 + 10161646 GCCAGTCGCGAGATCTCTAATCCACAGGCCTCCCTGCTGCCAAATTCCTGGCTTTTGAAGCCTGCTGCTGG-GGAAAAGCCACTCTGCATCAGTTAATGTTTCTTTTTCAAACTTTTTCCCC-TTCTATTATTTCACAACCAAACTCTGCCAGGGCTTGGCTTTGAGTTATTAAAGGGCCAAAAGCATCATTTTC---TTCAGATGCTTTTAAAGAGGAGGGGAAGGGTTTCCCAG-AGATAT-GTGGTGCCTT---------CCCCGTGCAC-----------ATG--TT-------------CCAAAATCAAAGCAGCCTTCTATGAACTCTCGTGC-AGGGCCT-CATCTTCCATGGTTAATTTAGCAATAGGGATCGTGTGCT-TCAAAGCAATACCTCATTCCTAGGGAGAAATTTATTTAACCTCAGGAAACTTTATTGCTGAATATATTAAGAACTACATGTTCATGATGATGAT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1444956 437 + 3144229 GCCAGTCGCGAGATCTCTAATCCACAGGCCTCCCTGCTGCCAAATTCCTGGCTTTTGAAGCCTGCTGCTGG-GGAAAAGCCACTCTGCATCAGTTAATGTTTCTTTTTCAAACTTTTTCCCC-TTCTATTATTTCACAACCAAACTCTGCCAGGGCTTGGCTTTGAGTTATTAAAGGGCCAAAAGCATCATTTTC---TTCAGATGCTTTTAAAGAGGAGGGGAAGGGTTTCCCAG-AGATAT-GTGGTGCCTT---------CCCCGTGCAC-----------ATG--CT-------------CCAAAATCACAGCCGCCTTCTATGAACTCTCGTGC-AGGGCCT-CATCTTCCATGGTTAATTTAGCAATAGGGATCGTGTGCT-TCCAAGCAATACCTCATTCCTAGGGAGAAAATTATTTAACCTCAGGAAACTTTATTGCTGAATATATTAAGAACTACATGTTCGTGATGATGAT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96730537 437 + 98384682 GCCAGTCGCAAGATCTCTAATCCACAGGCCTCCCTGCTGCCAAATTCCTGGCTTTTGAAGCCTGCAGCTGG-GGAAAAGCCACTTTGCATCAGTTAATGTTTCTTTTTCAAACTTTTTCCCC-TTCTATTATTTCACAACCAAACTCTGCCAGGGCCTGGCTTTGAGTTATTAAAGGGCCCACAGCATCATTTTC---TTCAGATGCTTTTAAAGAGGAGGGGAAGGGTTTCCCAG-AGATAC-GTGGTGCCTT---------CCCCGTGCAC-----------ACG--CT-------------CCAAAATCACAGCAGCCTTCTATGAACTCTCGTGC-AGGGCCT-CATCTTCCATGGTTAATTTAGCAATAGGGATTGTGTGCT-TCAAAGCGATACCTCATTCCTAGGGAGAAATTTATTTAACCTCAGGAACCTTTATTGCTGAATATATTAAGAACTACATGTTAGTGATGATGAC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8277025 437 - 10857215 GCCAGTCGCGAGATCTCTAATCCACAGGCCTCCCTGCTGCCAAATTCCTGGCTTTTGAAGCCTGCTGCTGG-GGAAAAGCCACTCTGCATCAGTTAATGTTTCTTTTTCAAACTTTTTCCCC-TTCTATTATTTCACAACCAAACTCTGCCAGGGCTTGGTTTTGAGTTATTAAAGGGCCAAAAGCATCATTTTC---TTCAGATGCTTTTAAAGAGGAGGGGAAGGGTTTCCCAG-AGATAT-GTGGTGCCTT---------CCCCGTGCAC-----------ATG--CT-------------CCAAAATCAAAGCAGCCTTCTATGAACTCTCGTGC-AGGGCCT-CATCTTCCATGGTTAATTTAGCAATAGGGATCGTGTGCT-TCCAAGCAATACCTCATTCCTAGGGAGAAATTTATTTAACCTCAGGAAACTTTATtgctgaatatattaagaactacatgtttgtgatgatgat i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15656522 439 - 23502949 GCCAGTCGCGAGGTCTCTAATCCACGGGCCTCCCTGCTGCCAAATTCCTGGCTTTTGAAGCCTGCAGCTGG-GGAAAAGCCACTCTGCATCAGTTACTGTTTCTTTTTCAAACTTTTTCCCC-TTCTATTATTTCACAACCAAACTCTGCCAGGGACTGGCTTTGAGTTATTAAAGGGCCAAAAGCATCATTTTC---TTCAGATGCTTTTAAACAGGAGGGGAAGGGTTTCCCAG-AGATAC-GTGGTGCCTT---------CCCCCTGCAC-----------ACGCACT-------------CCAAAATCACAGCTGCCTTCTATGAACTCTCATGC-AGGGCTT-CATCTTCCATGGTTAATTTAGCAATAGGGATTGTGTGCT-TCAAATCGACACCTCTTTCCTACGGAGAAATGTATTTAACCTCAGGAACCTTTATTGCTGAATATATTAAGAACTACATGTTAGTGATGATGAT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169938128 435 + 171630274 GCCATTGATGAGATTTTTAATCCACAGGTCTTCGTGCGGACAAATTCCTGAGCTTTGAAGCATGCAGCTGG-GGAAAAGCTACTAGGCATCAATTAATGTATTCTTTTCAAACTTTTTCCCC-GTTTGTTATTTCATAAACAAACGCTGCCAGGGCTTGGCTTTCGGTTATTAAAGGGCC--AAGCATCATTTTT---TCCAGACGTTTGTAAAAAGGAGGGGAAGGGTTTCCCAG-AGGTAT-GTGGCACGTTCCCCTTGCACCCCGTGTACAGG-------TGTG--CT-------------CCAAAA-----------TTCTGCCAACTCTCACGC-AGGGCCTCCGTCTTCCAGGGTGAATTTAGCAATAGGGATTGTGTGCC-TCCTGGTGATATCTCATTCTTAGAAAGAAATTCATTTAACCTCATCAACCTTTGTTGTTGAATATATTGTGAACTATCTGTTAG---TGATGAC i calJac3.chr4 I 468 C 0 s saiBol1.JH378287 1338570 426 - 2905041 TCCAGTCGTGAGATCTCTAATCCACAGGTCTTCCTGCTGCCAAATTCCTGGGCTTTGAAGCCTGCAGCTGG-GGAAAAGCTACTCTGCATCAATTAATGTTTCTTTTTCAAACTTTTTTCCC-TTCTGTTATTTCACAACCAAACTTTGCCAGGGCCTGGCTTTCAGTTATTAAAGGGCC--AAGCATCGTGTTT---TCCAGATGCTTTTAAAAAGGAGGGGAAAGGTCTCCCAG-AGGCAT-GTGGCACGTT---------CCCCGTGCACAGG-------TGCG--CT-------------CCGAAG-----------TTCTCCCAACTCTCGCGC-AGGGCCTCCATCCTCCAGGGTTAATTTAACAATAGGGATTGTGTGCC-TCCTGGTGATACCTCATTCTTAGGTAGAAATTCATTTAACCTCAGCAACCTTTATTGTTGAATATATTATGAACTATCTGTTAG---TGATGAC i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1302634 425 - 2164891 TCCAGTCGTGAGATCTCTAATCCACAGATCTTCCTGCTGCCAAATTCCTGGGCTTTGAAGCCTGCAGCTGG-GGAAAAGCTACTCTGCATCAATTAATGTTTCTTTTTCAGACTTTTTCCCC-TTCTGTTATTTCACAACCAAACTCTGCCAGGGCCTGGCTTTCAGTTATTAAAGTGCC--AAACATCATTTTT---TCCAGACGCTTTTAAAAAGGA-GGGAAGGGTTTCCCAG-AGGTAT-GTGGCATGTT---------CCCCGTGCACAGG-------TGCG--CT-------------CCAAAG-----------TTCTGCCAACTCTCGCGC-AGGGCCTCCATCTTCCAGGGTTAATTTAGCAATATGGATTGTGTGCC-TCCTGGTGATACCTCATTCTTAGGTAGAAATTCATTTAACCTCAGCAACCTTTATTGTCTAATATATTATGAACTATCTGCTAG---TGATGAC i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1547478 411 - 1813869 TCCCGTCGTGAGA---------------TCTTCCCGCTGCCAAATTCCTGGGCTTTGAAGCCTGCAGCTGG-GGAAGAGCTACTCTGCATCAATTAATGCTTCTTTTTCAAACTTTTTCCCC-TTCTGTTATTTCACGACCACACTCTGCCAAGGCCTGGCTTTCAGTTATTAAAGGGCC--AAGAATCATTTTT---TCCAGACGCTTTTAAAAAGGAGGGGAAGGGTTTCCCAG-AGGTAT-GGGGCACGTT---------CCCCGTGTACAGG-------TGCG--CT-------------CCAAAG-----------TTCCGCCAGCTCTCGTGC-AGGGCCTCCATCTTCCAGGGTTAATTTAGCAATAGGGATTGTGTGCC-TCCTGGTGATACCTCATTCTTAGGTAGAAATTCATTTAACCTCAGCAACCTTTATTGCTGAATATATTATGAACTATCTGTTAG---TGATGAC i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10981550 414 - 12073884 TCCAGCCCAGAGATTTCAAATCCACCACTCTTCCT-TTGCCAAATCCCCGGCCTTTGAAGCCTGCAGCTGG-TG-AGAGCTACCC-ATATCCCTTA---TTTTCCTCCTGAAGTCGTTCATC-AGCCATCATTTTATAACCAGTCTTTGCCAGGATCTGGCTTTTAATAATTCAAGAGCC--AAGGATTGTTTTT---TCAGATTATTTTTTAAATGT--------------------GCTGT-CTAGTGCTTT------------CATGCACAGA--TGAATTTCA--TT-------------CCAAAATCACACCCGATTTCCATGAACTCTTGTTT----TCAC-TGTTTTCTATAGTAAATGTAGCCGTAGGGATTGTGTGTTATGAAAAGGATGTCTTATTCTTAGGCAGGAATGTATTCCATTCCAGGAATCTCTACTGTCGGGTGTATTAGTAAATACGTGTTCACGATGGTGAG i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56213511 393 + 122678785 ----------------CTAATCTGCCGGGCTTCCTCCTGCCGAACCCCTG-CCTTTGAGGCAGGCAGCTGG-AG-AAAGCCGATGAGCACA------------TTTTCCTAACGTCTTCCCTATTCTTTCGTTTCACAATCA------GGCAGGGCTTTGCTTTCAATTACTAAAGAGCC--AAGGATCATTTTT---------CAACCTCAAAAATAAAGACAACAGTTTGCAAACAGTTAT-GTAGTG---T---------TTCCATGCACACG-------TGTG--TTTCATTCAAGCAGATCAAAATCAGGCCCAACGTTAAGGAACT------------CCA-TGCTTACCGTGGTTCAT-CAGACGCAGGGATGGTGTGAGGTTAACATGATGCCTCATTCCTACAGAGAAACTCATGTAGC-GCAGAAACTTTTACTGTCGGGTATATTAAGAAATGAAT----GTGACAATGGC i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 636110 446 + 760995 TCCAGGCAAGCAATTTCTAATCCATCATGTTGTGTTCTGCCAAATTCCCTGACTTTGAAGCCTGCAGTTGGTGAAAAAGCTATTCCACACCAATCACTCTTTTTCCCCCTAAATTCTT-----TTCTATCATTTCACAACCAAGCTCTACCAGAGCCTTATTTTCTATTATTAATTAGCC--AAGGATCTTTTTTTTTTTCAGGCTAATTTACAAAAGAGGACAA---TTTCTAAACAGTTATAATCATGTTTT---------CTTCATGCACACATATGTATTTCA--TT-------------CCAAAATTGTATACAATTTTGATAAATTCTTGGGTTCAGGTCC-CGTTTTCCATGGTTAATTTAGTAGTAGAGATAATATGCTATAAAAATGTTGCCTCATTCTTTCGGAGAAAGTTATTTAACTTCATGAACTTTTATTGTTGAATA-ATTAAGAAATGAATGTTTGTGATGATGAT i dasNov3.JH569188 C 0 I 9 a score=169811.000000 s hg38.chr6_KB021644v2_alt 151593 13 + 185823 ATGAGAAATTCAT s panTro5.chr6 173608359 13 + 175400573 ATGAGAAATTCAT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171841660 13 + 173848474 ATGAGAAATTCAT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11524758 13 - 12463322 ATGAGAAATTCAT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156357557 13 + 157873769 ATGAGAAATTCAT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170385010 13 + 172585720 ATGAGAAATTCAT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169128301 13 - 170955103 atgagaaattcat i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8415033 13 + 10161646 ATGAGAAATTCAT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1445393 13 + 3144229 ATGAGAAATTCAT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96730974 13 + 98384682 ATGAGAAATTCAT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8277462 13 - 10857215 atgagaaattcat i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15656961 13 - 23502949 ATGAGAAATTCAT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169938563 13 + 171630274 ATGAGAAATTCAT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1338996 13 - 2905041 ATGAGAAATTCat i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1303059 13 - 2164891 ATGAGAAATTCat i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1547889 13 - 1813869 GTGAGAAattcat i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10981964 13 - 12073884 GTGAGAAATGTGT i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56213904 13 + 122678785 ATGAGAAAATCAT i canFam3.chr1 C 0 I 23 e dasNov3.JH569188 636556 9 + 760995 I a score=208440.000000 s hg38.chr6_KB021644v2_alt 151606 19 + 185823 CTATCAAAACATCACTAGA s panTro5.chr6 173608372 19 + 175400573 CTATCAAAACATCACTAGA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171841673 19 + 173848474 CTATCAAAACATCACTAGA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11524771 19 - 12463322 CTATCAAAACATCACTAGA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156357570 19 + 157873769 CTATCAAAACATCACTAGA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170385023 19 + 172585720 CTATCAAAACATCACTAGA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169128314 19 - 170955103 ctatcaaaacatcactaga i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8415046 19 + 10161646 CTATCAAAACATCACTAGA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1445406 19 + 3144229 CTATCAAAACATCACTAGA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96730987 19 + 98384682 CTATCAAAACATCACTAGA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8277475 19 - 10857215 ctatcaaaacatcactaga i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15656974 19 - 23502949 CTATCAAAACATCACTAGA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169938576 19 + 171630274 CTGTCAAAACATCACTAGG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1339009 19 - 2905041 ctgtcaaaacatcactagg i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1303072 19 - 2164891 ctgtcaaaacatcactagg i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1547902 19 - 1813869 ctgtcaaaacatcactagg i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10981977 19 - 12073884 GCATGGAAACCTTGCTAAG i otoGar3.GL873575 C 0 I 124 e dasNov3.JH569188 636556 9 + 760995 I e canFam3.chr1 56213917 23 + 122678785 I a score=1222820.000000 s hg38.chr6_KB021644v2_alt 151625 129 + 185823 Gggccgggcgtggtggttcacgcctataatcccagcactttgggaggccgaggcaggtggatcacttgaggtcaggggttcaagaccagcctgaccaacatgatgaaaccctgcatctactaaaaatac s panTro5.chr6 173608391 129 + 175400573 Gggccgggcgtggtggttcacgcctataatcccagcactttgggaggccgaggcaggtggatcacttgaggtcaggggttcaagaccagcctgaccaacgtgatgaaaccctgcatctactaaaaatac i panTro5.chr6 C 0 C 0 s panPan2.chr6 171841692 129 + 173848474 Gggccgggcgtggtggttcacgcctataatcccagcactttgggaggccgaggcaggtggatcacttgaggtcaggggttcaagaccagcctgaccaacgtgatgaaaccctgcatctactaaaaatac i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11524790 129 - 12463322 Gggctgggcgtggtggttcacgcctataatcccagcactttgggaggccaaggcaggtggatcacttgaggtcaggggttcaagaccagcctgaccaacatgatgaaaccctgcatctactaaaaatac i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156357589 129 + 157873769 Gggctgggcatggtggctcacgcctataatcccagcactttgggaggccgaggcaggtggatcacttgaggtcaggggttcgagaccagcctgaccaacatgatgaaaccctgtgtctactaaaaatac i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170385042 129 + 172585720 Gggccgggcgccgtggttcacacctgtaatcccagcactttgggaagccgaggcaggtggatcacttgaggtcaaggatatgagaccagcctgaccaacatgatgaaaccctgtgtctactaaaaatac i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169128333 129 - 170955103 gggccgggcgccgtggttcacacctgtaatcccagcactttgggaagccgaggcaggtggatcacttgaggtcaaggatatgagaccagcctgaccaacatgatgaaaccctgtgtctactaaaaatac i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8415065 129 + 10161646 Gggccgggcgccgtggttcacacctgtaatcccagcactttgggaagctgaggcaggtggatcacttgaggtcaaggatatgagaccagcctgaccaacatgatgaaaccctgtgtctactaaaaatac i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1445425 129 + 3144229 Gggccgggcgccgtggttcacacctgtaatcccagcactttgggaagccgaggcaggtggatcacttgaggtcaaggatatgagaccagcctgaccaacatgatgaaaccctgtgtctactaaaaatac i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96731006 129 + 98384682 Gggctgggcacggtggttcatgcctgtaatcccagaactttggaaggccgaggcaggtggctcgcttgaggtcaggggtttgagaccagcctgatcaacatgatgaaaccctgtgtctactaaaaatac i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8277494 129 - 10857215 gggccgggcgccgtggttcacacctgtaatcccagcactttgggaagtcgaggcaggtggatcacttgaggtcaaggatatgagaccagcctgaccaacatgatgaaaccctgtgtctactaaaaatac i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15656993 129 - 23502949 Gggccaggtacggtggttcacgcctgtaatcccagcactttgggaggccgaggcaggtggctcacttgaggtcaggggtttgagatcagcctgaccaacatgatgaaaccctgtgtctactaaaaatac i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169938595 119 + 171630274 GGGCCAGG----------CGcgcctgtaatcacagcactttgggaggcttcggtgggtggatcacttgacgtcaggggttcaagaccagcctggccaacatggcaaaaccctgtctctactaaaaatac i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1339028 129 - 2905041 gggccaggcacagcggctcacgcctgtaatcccagcactttgggaggcttaggtgggtggatcacttgaggtcaggggttcaacaccagcctggccaacatggcaaaaccctgtctctgctaaaaatac i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1303091 129 - 2164891 gggccaggcgcagcagctcacacctataatcccagcgctttgggaggcttaggtgggtggatcacttgaggtcaggggttcaaggccagcctggccaacatggcaaaaccctgtctctactaaaaatac i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1547921 129 - 1813869 gggccaggcgcagcggctcacgcctgtaatctcagcactttgggaggcttaggtgggtggatcacttgaggtcaggggttcaagaccagcctggccaacatggcaaaaccctgtctctactaaaaatac i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10981996 124 - 12073884 I e dasNov3.JH569188 636556 9 + 760995 I e canFam3.chr1 56213917 23 + 122678785 I a score=1657212.000000 s hg38.chr6_KB021644v2_alt 151754 199 + 185823 aaaaattagccgggcatggtggtgggcgc--------ctgtaatcccagcta---cttgggaggctgagccaggagaatt--------------------gcttgaatctgggagg---cagaggttgcagtgagccgagatcacaccactgcactccagcctgggcatcaagagtaaaactcagtc--tggaaaaaaa--aaa--TCAC---TAGGCACCCCCATGATTATGTACAATTCT s panTro5.chr6 173608520 199 + 175400573 aaaaattagccaggcatggtggtgggcgc--------ctgtaatcccagcta---cttgggaggctgagccaggagaatt--------------------gcttgaatctggcagg---cagaggttgcagtgagccgagatcacaccactgcgctccagcctgggcatcaagagtaaaactcagtc--tggaaaaaaa--aaa--TCAC---TAGGCACCCCCATGATTATGTACAATTCT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171841821 198 + 173848474 aaaaattagccaggcatggtggtgggcgc--------ctgtaatcccagcta---cttgggaggctgagccaggagaatt--------------------gcttgaatctggcagg---cagaggttgcagtgagccgagatcacaccactgcactccagcctgggcatcaagagtaaaactcagtc--tgg-aaaaaa--aaa--TCAC---TAGGCACCCCCATGATTATGTACAATTCT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11524919 199 - 12463322 aaaaattagccaggcatggtggtgggcgc--------ctgtaatcccagcta---cttgggaggctgagccaggagaatt--------------------gcttgaatctgggagg---cagtggttgcagtgagccgagatcacaccactgcactccagcctgggcatcaagagtaaaactcagtc--tggaaaaaaa--aaa--TCAC---TAGGCACCCCCATGATTATGTACAATTCT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156357718 201 + 157873769 aaaagttagccggacatggtgatgcgtgc--------ctgtaatcccagcta---ctcgggaggctgagccaggagaatt--------------------gcttgaacccgggagg---cggaggttgcagtcagctgagatggtgccatttcactccagcctgggcatcaagagtaaaactcagtg--tggaaaaaaa--aaaaTTCAC---TAGACACCTCCATAATTATGTACAATTCT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170385171 197 + 172585720 aaaaattagctgggcatggtggtgcatgc--------ctgtaatcccagcta---ctcagga-gccgagctaggagaatt--------------------gctcgaacccaggagg---cggaggttgtagtgagcggagatcgtgcca--gcactccaacctgggcatcaagggtaaaactcagtc--tagaaaaaaacgaaa--tcac---taggcacc-ccatgactatgtacaattct i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169128462 198 - 170955103 aaaaattagctgggcatggtggtgcatgc--------ctgtaatcccagcta---ctcaggaggccgagctaggagaatt--------------------gctcgaacccaggagg---cggaggttgtagtgagcggagatcgtgcca--gcactccaacctgggcatcaagggtaaaactcagtc--tagaaaaaaacgaaa--tcac---taggcacc-ccatgactatgtacaattct i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8415194 198 + 10161646 aaaaattagctgggcatggtggtgcatgc--------ctgtaatcccagcta---ctcaggaggccgagctaggagaatt--------------------gctcgaacccaggagg---cggaggttgtagtgagcggagatcgtgcca--gcactccaacctgggcatcaagggtaaaactcagtc--tagaaaaaaaCATAa--tcac---taggcacc-ccatgactatgtacaattct i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1445554 198 + 3144229 aaaaattagctgggcatggtggtgcatgc--------ctgtaatcccagcta---ctcaggaggccgagctaggagaatt--------------------gctcgaacccaggaga---cggaggttgtagtgagcggagatcgtgcca--gcactccaacctgggcatcaagggtaaaactcagtc--tagaaaaaaacaaaa--tcac---taggcacc-ccatgactatgtacaattct i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96731135 198 + 98384682 aaaaattagctgggcatggtggtgcatgc--------ctgtaatcccagcta---ctcaggaggccgagctaggagaatt--------------------gctcgaaccccggagg---cggaggttgtagtgagcggagatcgtgcca--gcactccagcctgggcatcaagggtaaaactcagtc--tagaaaaaaacaaaa--TCAC---TAGGCAGC-CCATGACTATGTACAATTCT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8277623 198 - 10857215 aaaaattagctgggcatggtggtgcatgc--------ctgtaatcccagcta---ctcaggaggccgagctaggagaatt--------------------gctcgaacccaggagg---cggaggttgtagtgagtggagatcgtgcca--gcactccaacctgggcatcaagggtaaaactcagtc--tagaaaaaaacaaaa--tcac---taggcacc-ccatgactatgtacaattct i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15657122 193 - 23502949 aaaaattagctgggcatggtggtgcatgc--------ctgtaatcccagcta---ctcgggaggccgagctagaagaatt--------------------gctcgaacccgggagg---cggaggttgcagtgagcggagatcatgcca--gcactccagcctgggcatcaagggtaaaa--cagtc--tagaaaaaaa---aa--TCAC---TAGGCACC-CCATGACTATGTACAATTCT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169938714 197 + 171630274 acaaattagccgggcatggtggtgcatgc--------ttgtaatctcagcta---ctcaggaggctgaggcaggagaatc--------------------gcttgaacccaggagg---caaaggttgcagtgagctgggattacaccactgcactgcagcct-ggcaacaagagcaaaactctgtc--aaaaaaaaaa--aaa--tcaa---taggcacc-ccgtgactatgtacaattat i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1339157 199 - 2905041 acaaattattctggcatggtggtacatgc--------ttgtaatcccagcaa---ctcaggaggctgaggcagaagaatc--------------------acttgaacccaggagg---caaaggttgcagtgagctgggattgcaccactgcactccagcct-ggcaacaagagcaaaactctgtcaaaaaaaaaaaa--aaa--tcaa---taggcacc-ccatgactatgtacaattat i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1303220 185 - 2164891 acaaattagcctggcctggtggtgcatgc--------ttgtaatcctggcta---ctcaggaggctgaggcaggagaatt--------------------gcttgaacccaggagg---caaaggttgcagtaagctgggattgcaccact-----------t-ggcaacaagagcaaaactctgtc---aaaaaaaaa--aaa--tcaa---taggcacc-ccatgactatgtacaattat i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1548050 195 - 1813869 acaaattagccgggcttggtggtgcatgc--------ttgtaatcccagcta---ctcaggaggcggaggcaggagaatc--------------------gctagaacccaggagg---caaaggttgcagtgagctgggattgcgcca--gcactccagcct-ggcaacaagagcaaaactctgtc--aaaaaaaaga--aag--tcaa---taggcacc-ccatgactatgtacaattat i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10982120 215 - 12073884 aaagggcagcgtgatgcagaggcaggtgcagggacatttggaatccgggcgagctccagggcgacagagccagcaaacttcaggcaagtcacctgctctcttttgaacctcagttgtttcatcggtagaaatgag----gatcataacagttctctctagact------------------tctggtgatggtgacata--aaa--tTAAAGGTGGAGGCC-ACATAAGTGTGGCCCAGTCT i otoGar3.GL873575 I 124 I 70 e dasNov3.JH569188 636556 9 + 760995 I e canFam3.chr1 56213917 23 + 122678785 I a score=364752.000000 s hg38.chr6_KB021644v2_alt 151953 49 + 185823 TTCTTGTAAATTAATAAAAT------AC-TTTTTTAA--AAATGAGGATTATAGTTAA s panTro5.chr6 173608719 49 + 175400573 TTCTTGTAAATTAATAAAAT------AC-TTTTTTAA--AAATGAGGATTATAGTTAA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171842019 47 + 173848474 TTCTTGTAAATTAATAAAAT------AC-TTTTT--A--AAATGAGGATTATAGTTAA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11525118 49 - 12463322 TTCTTGTAAATTAATAAAAT------AC-TTTTTTAA--AAATGAGGATTATAGTTAA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156357919 52 + 157873769 TTCTTGTAAATTAATAAAATAAAATAAT-TTTTT--A--AAATGAGGATT-TAGTTAA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170385368 54 + 172585720 ttcttgtaaattaataaaataaAAT-TC-TTTTTTTT--AAATGATGATTATAGTTAA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169128660 53 - 170955103 ttcttgtaaattaataaaataaAAT-TC--TTTTTTA--AAATGATGATTATAGTTAA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8415392 54 + 10161646 ttcttgtaaattaataaaataaAAT-TC-TTTTTTTA--AAATGATGATTATAGTTAA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1445752 55 + 3144229 ttcttgtaaattaataaaataaAAT-TCTTTTTTTTA--AAATGAGGATTATAGTTAA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96731333 56 + 98384682 TTCTTGTAAATTAATAAAATAAAAT-TC-TTTTTTTTTAAAATGAGGATTGTAGTTAA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8277821 54 - 10857215 ttcttgtaaattaataaaataaaaT-TC-TTTTTTTT--AAATGAGGATTATAGTTAA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15657315 55 - 23502949 TTCTTATAAATTAAGAAAATAAAAT-TC-TTTTTTTA-AAAATGAGGATTACAGTTAA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169938911 50 + 171630274 ttcttgtcaattaataaaataaAAT-AT-TTTT------AAATGAGGATTATAGTTAA i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1339356 48 - 2905041 ttcttgtcaattaataaaataaAAT-AT-TTTT------AAATGAGCATTATAGTT-- i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1303405 49 - 2164891 ctcttgtcaattaataaaataaAAT-AT-TTTT-------AATGAGGATTATAATTAA i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1548245 50 - 1813869 ttcttgtcaattaataaaataaaaT-AT-TTTC------AAATGAGGATTATAGTTAA i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10982335 70 - 12073884 I e dasNov3.JH569188 636556 9 + 760995 I e canFam3.chr1 56213917 23 + 122678785 I a score=230464.000000 s hg38.chr6_KB021644v2_alt 152002 26 + 185823 GAGCATTACATTAAAAAAGAAATGTC s panTro5.chr6 173608768 26 + 175400573 GAGCATTACATTAAAAAAGAAATGTC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171842066 26 + 173848474 GAGCATTACATTAAAAAAGAAATGTC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11525167 23 - 12463322 GAGCATTACATTAAAA---AAATGTC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156357971 26 + 157873769 GAGCATTACATTAAAAAAGAAATGTC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170385422 26 + 172585720 GAGCATTACATTAAAAAAGAAATGTT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169128713 26 - 170955103 GAGCATTACATTAAAAAAGAAATGTT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8415446 26 + 10161646 GAGCATTACATTAAAAAAGAAATGTT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1445807 26 + 3144229 GAGCAGTACATTAAAAAAGAAATGTT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96731389 26 + 98384682 GAGCATTACATTAAAAAAGAAATGTT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8277875 26 - 10857215 GAGCATTACATTAAAAAAGAAATGTT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15657370 26 - 23502949 GAGCATTACATTAAAAAGGAAATGTT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169938961 25 + 171630274 GAGCATTAAGTT-AAATAGAAATATC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1339404 26 - 2905041 GAGCATTAAATTAAAAAAGAAATGTC i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1303454 25 - 2164891 GAGCATTAAATT-AAAAAGAAATCTC i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1548295 26 - 1813869 GAGCATTAAATTTAAAATGAAATGTC i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10982405 26 - 12073884 GTGCCTTCTCTCCACAAACAATTGTC i otoGar3.GL873575 I 70 C 0 e dasNov3.JH569188 636556 9 + 760995 I e canFam3.chr1 56213917 23 + 122678785 I a score=364812.000000 s hg38.chr6_KB021644v2_alt 152028 34 + 185823 TATT------------------------TAATTA-----TGAAAACTGAGATAATGAGGTAGA s panTro5.chr6 173608794 34 + 175400573 TATT------------------------TAATTA-----TGAAAACTGAGATAATGAGGTAGA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171842092 34 + 173848474 TATT------------------------TAATTA-----TGAAAACTGAGATAATGAGGTAGA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11525190 34 - 12463322 TATT------------------------TAATTA-----TGAAAACTGAGATAATGAGGTAGA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156357997 30 + 157873769 ----------------------------TAATTA-----TGAAAACTGAGCTAATGAGGTAGA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170385448 34 + 172585720 TATT------------------------TAATTA-----TGAAAACTGAGATAATGAGGTAGA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169128739 34 - 170955103 TATT------------------------TAATTA-----TGAAAACTGAGATAATGAGGTAGA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8415472 34 + 10161646 TATT------------------------TAATTA-----TGAAAACTGAGATAATGAGGTAGA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1445833 34 + 3144229 TATT------------------------TAATTA-----TGAAAACTGAGATAATGAGGTAGA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96731415 34 + 98384682 TATT------------------------TAATTA-----TGAAAACTGAGATAATGAGGTAGA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8277901 34 - 10857215 TATT------------------------TAATTA-----TGAAAACTGAGATAATGAGGTAGA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15657396 34 - 23502949 TATT------------------------TAATTT-----TGAAAACTGAGATAATGAGGTAGA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169938986 33 + 171630274 TATT------------------------TAATTA-----TGAAAACTGAGATAATGAGGTAG- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1339430 34 - 2905041 TATT------------------------TAATTA-----TGAAAACTGAGATAATGAGGTAGA i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1303479 29 - 2164891 ----------------------------TAATTA-----TGAAAACTGAGATAATGAGGTAG- i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1548321 33 - 1813869 TATT------------------------TAATTG-----TGAAAACTGAGATAATGAGGTAG- i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10982431 63 - 12073884 TATTGACATCTATTTCTTCTTACTCCAGTAATTTTCAACTGTAGAACAAGCAAGAAAGGCAAA i otoGar3.GL873575 C 0 C 0 s dasNov3.JH569188 636565 34 + 760995 TATT------------------------TAATTA-----TGAAACCTGAAATAATAAGGTAGA i dasNov3.JH569188 I 9 I 987 e canFam3.chr1 56213917 23 + 122678785 I a score=2231476.000000 s hg38.chr6_KB021644v2_alt 152062 246 + 185823 GAGTGGtttttttgttttgtttttttgttt-----ttttgagatggattcttgctctgttgctcaggctgaagtgcagtggtgtggactcggctcactgcaacctctgtctcccaggttcaagcatttctcctgcctcagcctcccaagtagctgggattacaggcacctgccaccacacctggttaatttttgta-tttttagtagagacagggtttcactat-------gttggcc--aggctggtctcgaactcctga s panTro5.chr6 173608828 240 + 175400573 GAGTGGtt------ttttgtttttttgttt-----ttttgagatggattcttgctctgttgctcaggctggagtgcagtggtgtggactcggctcactgcaacctctgtctcccaggttcaagcatttctcctgcctcagcctcccaagtagctgggattacaggcacctgccaccacacctggttaatttttgta-tttttagtagagacagggtttcactat-------gttggcc--aggctggtctcgaactcctga i panTro5.chr6 C 0 C 0 s panPan2.chr6 171842126 239 + 173848474 GAGTGGtt------ttttg-ttttttgttt-----ttttgagatggattcttgctctgttgctcaggctggagtgcagtggtgtggactcggctcactgcaacctctgtctcccaggttcaagcatttctcctgcctcagcctcccaagtagctgggattacaggcacctgccaccacacctggttaatttttgta-tttttagtagagacagggtttcactat-------gttggcc--aggctggtctcgaactcctga i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11525224 240 - 12463322 GAGTGGtt------ttttgtgtttttgttt-----ttttgagatggattcttgctctgttgctcaggctggagtgcagtggtgtggactcgactcactgcaacctctgtctcccaggttcaagcatttctcctgcctcagcctcccaagtagctgggattacaggcacctgccaccacacctggttaatttttgta-tttttagtagagacagggtttcactat-------gttggcc--aggctggtctcgaactcctga i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156358027 242 + 157873769 GAGTGGtttt----ttttgtttgtttgttt---tgttttgagatggattctcgctccgttgctcaggctggagtgcagtggtgtggactcggctcactgcaacctctgtctcccaggttcaagcatttctcctgcctcagcctcccaagttgctgggattacaggcagctgccaccacacctggttaatttttgta-tttttagtagagaca--gtttcactat-------gttggcc--aggctggtctcgaactcctga i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170385482 248 + 172585720 GTGTTtttat----ttttatttatttgtttatttattttgagtctgattcttgctctgtcgctcaggctggagtgcagtggtgtggactcggctcactgcaacctctgtctcccaggttcaagcatttctcctgcctcagcctgccgagtaactgggattacaggcacccaccactaaacctggttaatttttgtattttttagtagagacaggttttcactat-------gttggcc--aggctggtcttgaactcctga i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169128773 248 - 170955103 GTGTTtttat----ttttatttatttgtttatttattttgagtctgattcttgctctgtcgctcaggctggagtgcagtggtgtggactcggctcactgcaacctctgtctcccaggttcaagcatttctcctgcctcagcctgccgagtaactgggattacaggcacccaccactaaacctggttaatttttgtattttttagtagagacaggttttcactat-------gttggcc--aggctggtctcgaactcctga i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8415506 248 + 10161646 GTGTTtttat----ttttatttatttgtttatttattttgagtctgattcttgctctgtcgctcaggctggagtgcagtggtgtggactcggctcactgcaacctctgtctcccaggttcaagcatttctcctgcctcagcctgccgagtaactgggattacaggcacccaccactaaacctggttaatttttgtattttttagtagagacaggttttcactat-------gttggcc--aggctggtctcgaactcctga i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1445867 248 + 3144229 GTGTTtttat----ttttatttatttgtttatttattttgagtctgattcccgctctgtcgctcaggctggagtgcagtggtgtggactcggctcactgcaacctctgtctcccaggttcaagcatttctcttgcctcagcctgccgagtaactgggattacaggcacccaccactaaacctggttaattgttgtattttttagtagagacaggttttcactat-------gttggcc--aggctggtctcgaactcctga i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96731449 247 + 98384682 GTGTTtttat----ttttatttatttgtttatttattttgagtccgattctcgctctgtcgatcaggctggagtgcagtggtgtggactcgactcactgcaacctctgtctcccaggttcaagcatttctcctgcctcagcctgccaagtaactgggattacaggcacccaccaccaaacctggttaatttttgta-tttttagtagagacaggttttcactat-------gttggcc--aggctggtctcgaactcctga i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8277935 248 - 10857215 GTGTTtttat----ttttatttatttgtttatttattttgagtctgattcttgctctgtcgctcaggctggagtgcagtggtgtggactcggctcactgcaacctctgtctcccaggttcaagcatttctcctgcctcagcctgccgagtaactgggattacaggcacccaccactaaacctggttaatttttgtattttttagtagagacaggttttcactat-------gttggcc--aggctggtctcgaactcctga i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15657430 247 - 23502949 GTGTTtttat----ttttctttatttgtttatttattttgagtccgattctccctctgtcgctcaggctggagtacagtggtgtggactcggctcactgcaacctctgtttcccaggttcaagcatttctcctgcctcagcctcccgagtaactgggattacaggcacccgccaccaaacctggttaatttttgta-tttttagtagagacaggttttcactat-------gttggcc--aggctggtctcgaactcctga i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169939019 229 + 171630274 --------At----tttttttttttgagat----------ggttggattcttgctctgtcactcaggctggagtacaatggcatggacttggctcactgcaacctttgcctcccgggttcaagcgtttctcctgcctcagcctcccgagtagttgggattacaggcctgtaccaccatgcctggctaagttttgca-ttttcaggagagataggttttcactgt-------gttggcc--aggctggtcttgaactcctga i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1339464 236 - 2905041 TGAttattat----tatttttttttgagat----------ggaaggattcttgctctgtcgctcagtctggggtacaatggcatggacttggctcactgcaacctttgcctcccaggttcaagcatttctcttgcctcagcctcccgagtagttgggattacaggcctgcgtcaccatgcctggctaattttcgca-ttttcagtagagatagggtttcactat-------gttggcc--aggctgctctcgaactcctg- i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1303508 231 - 2164891 -----Atttt----ttttttttttttagat----------ggatggattcctgctctgtcgctcagg-tggagtacaatggcacggacttggctcactgcaacctttgcctcccaggttcaagcgtttctcctgcctcagcctcccgagtagttgggattacaggcctgcgtcaccatgcctggctaatttttgca-ttttcagtagagatagggtttcactgt-------gttggcc--aggctggtcttgaactcctga i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1548354 226 - 1813869 ---------------Attcttttttgagat----------ggatggattcttgctctgtcgctcaggctggagtacaatagcatggacttggctcactgcaacctctgcctcccaggttcaagcgtttctcctgcctcagcctcccaagtagttgggattacaggcctgtgccaccatgcctggctaagttttgca-ttttcagtagagatagggtttcactgt-------gttggcc--aggctggtctcaaactcctga i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10982494 238 - 12073884 GTATGGGTCA----CTTTAtttatttttta--tttttttgagagagagtctcactgtttcacccatggtagagtactgtggtgt---cacagctcacagcaacctcaaactcttgggcttaggcgattttcttgcctcagccttccgagtagctgggactacaggcgtccaccacaatgcctggctattttt-----tttttattgtag-----ttgtcactgctgttttagctggcagggggctgggttcgaaccc---- i otoGar3.GL873575 C 0 C 0 e dasNov3.JH569188 636599 987 + 760995 I e canFam3.chr1 56213917 23 + 122678785 I a score=356059.000000 s hg38.chr6_KB021644v2_alt 152308 49 + 185823 AATGAGATAGA-TTTTAAATGTTGTATATTGCAAGAGAgcagtgagaggc s panTro5.chr6 173609068 49 + 175400573 AATGAGATAGA-TTTTAAATGTTGTATATTGCAAGAGAgcagtgagaggc i panTro5.chr6 C 0 C 0 s panPan2.chr6 171842365 49 + 173848474 AATGAGATAGA-TTTTAAATGTTGTATATTGCAAGAGAgcagtgagaggc i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11525464 49 - 12463322 AATGAGATAGA-TTTTAAATGTTGTATATTGCAAGAGAGCAGTGAGAGAC i gorGor5.CYUI01015032v1 C 0 I 27 s nomLeu3.chr3 156358269 50 + 157873769 AATTAGATAGATTTTTAAATGTTGTATATTGTAagagagcagtaagaggc i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170385730 39 + 172585720 AATGAGATCGA-TTTTAaatgttgtatattgcaagaga----------gc i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169129021 39 - 170955103 AATGAGATCGA-TTTTAAATGTTGTATATTGCAAGAGA----------GC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8415754 39 + 10161646 AATGAGATCGA-TTTTAaatgttgtatattgcaagaga----------gc i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1446115 39 + 3144229 AATGAGATCGA-TTTTAAATGTTGTATATTGCAAGAga----------gc i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96731696 49 + 98384682 AATGAGATTGA-TTTTAAATGTTGTATATTGCAAGAGAGCAGTGAGAGGC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8278183 39 - 10857215 AATGAGATCGA-TTTTAaatgttgtatattgcaagaga----------gc i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15657677 49 - 23502949 AATGAGATCGA-TTTTAAATGTTGTATTTTGCAAGAGAgcagtgagaggc i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169939248 49 + 171630274 AATGAGGTAGA-TTTTAAGTGCTGCGTATTACAAGAGAGCAGTGAGGTCC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1339700 49 - 2905041 aATGCGGTAGA-TTGTAAATGCTGCATATTACAAGAGAGCAGTGAGGCCC i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1303739 49 - 2164891 AATGAGGCAGA-TTTTAAATGCTGCATATTACAagagagcagtgaggtcc i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1548580 49 - 1813869 AATGAGGTAGA-TTTTAAATGCTGCATATTACAAGAGAGCAGTGAGGTCC i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10982732 34 - 12073884 -accatcctgg-gtatatgtggccggcaccctatga-------------- i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56213940 49 + 122678785 AATAAAGTAGA-TTTTAAATTTTACATCTTGAGCAGGCTCAGCCTGAAAC i canFam3.chr1 I 23 C 0 e dasNov3.JH569188 636599 987 + 760995 I a score=62928.000000 s hg38.chr6_KB021644v2_alt 152357 20 + 185823 --------agtgagagact-gggggt-------ggg s panTro5.chr6 173609117 27 + 175400573 --------agtgagagact-gggggtgggggggggg i panTro5.chr6 C 0 C 0 s panPan2.chr6 171842414 25 + 173848474 --------agtgagagact-gggggt--gggggggg i panPan2.chr6 C 0 C 0 s nomLeu3.chr3 156358319 18 + 157873769 --------agtgagagact-tgggga-------g-- i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170385769 19 + 172585720 --------agtgagagacc-agggggcc-------- i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169129060 19 - 170955103 --------AGTGAGAGACC-AGGGGGCC-------- i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8415793 19 + 10161646 --------agtgagagacc-agggggcc-------- i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1446154 19 + 3144229 --------agtgagagacc-agggggcc-------- i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96731745 19 + 98384682 --------AGTGAGAGACC-AGGGGGCC-------- i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8278222 19 - 10857215 --------agtgagagacc-agggggcc-------- i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15657726 18 - 23502949 --------agtgagagacc-aggggg-c-------- i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169939297 17 + 171630274 --------AGTGAGAGACCAGGGGG----------- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1339749 16 - 2905041 --------AGTGAGAGACC-GGGGG----------- i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1303788 16 - 2164891 --------agtgagaggcc-agggg----------- i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1548629 16 - 1813869 --------AGTGAGAGACC-AGGGG----------- i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10982766 13 - 12073884 --------actgagccaca-gg-------------- i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56213989 22 + 122678785 CAGGAAGGATGGTGAGGTT-TGG------------- i canFam3.chr1 C 0 C 0 e dasNov3.JH569188 636599 987 + 760995 I e gorGor5.CYUI01015032v1 11525513 27 - 12463322 I a score=679870.000000 s hg38.chr6_KB021644v2_alt 152377 92 + 185823 caggagacaagtgtgagtttgcagccgagctcccaggcgccaccactgtagagatgcaggcaggtcgtgtgtctct-ctgaacctcag-tttta s panTro5.chr6 173609144 92 + 175400573 caggagacaagtgtgagtttgcagccgagctcccaggcaccaccactgtagagatgcaggcaggtcgtgtgtctct-ctgaacctcag-tttta i panTro5.chr6 C 0 C 0 s panPan2.chr6 171842439 92 + 173848474 caggagacaagtgtgagtttgcagccgagctcccaggcaccaccactgtagagatgcaggcaggtcgtgtgtctct-ctgaacctcag-tttta i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11525540 92 - 12463322 CAGGAGACAAGTGTGAGTTTGCAGCCGAGCTCCCAGGCACCACCACTGTAGAGATGCAggcaggtcgtgtgtctct-ctgaacctcag-tttta i gorGor5.CYUI01015032v1 I 27 C 0 s nomLeu3.chr3 156358337 92 + 157873769 caggagacaagtgtgagtttgcagctgagctcccaggcgccaccgctgtagagatgcaggcaggtcgtgtgtctct-ctgaacctcag-tttta i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170385788 92 + 172585720 cgggagaccagtgtgagtttgcagctgagctcccaggagccaccgctgcagagatgcaggcaggtcttgtgtctct-ctgaacctcag-ttttt i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169129079 91 - 170955103 CGGGAGACCAGTGTGAGTTTGCAGCTGAGCTCCCAGGAGCCACCGCTGCAGAGATGCAGGCAGGTCTTGTGTctct-ct-aacctcag-ttttt i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8415812 90 + 10161646 cgggagaccagtgtgagtttgcagctgagctcccaggagccaccgctgcagagatgca-gcaggtcttgtgtctct-ct-aacctcag-ttttt i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1446173 92 + 3144229 cgggagaccagtgtgagtttgcagccgagctcccaggagccaccgctgtggagatgcaggcaggtcttgtgtctcc-ctgaacctcag-ttttt i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96731764 92 + 98384682 CGGGAGACCAGTGTGAGTTTGCAGCCGAGCTCCCAGGAGCCACCGCTGCAGAGATGCAGGCAGGCCTTGTGTctct-ctgaacctcag-ttttt i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8278241 92 - 10857215 cgggagaccagtgtgagtttgcagccgagctcccaggagccaccgctgtggagatgcaggcaggtcttgtgtctcc-ctgaacctcag-ttttt i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15657744 83 - 23502949 agagagaccagtgtgagtttgcagccgagctcccaggagccaccgctgtagagatgcaggca---------tctct-ctgaacctcag-ttttt i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169939314 79 + 171630274 CAGGAGACGTGTGTGACTTTGAAGCGGCGCTCCCAGGCACC-------------TGCAGGCAGGTGGTGTCTTtct-ttgaacctcaa-ttttt i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1339765 79 - 2905041 AAGGAGACGTGTGTGACTTTGCAGCGGAGCTCCCAGGCACC-------------TGCAggcaggtcgtgtgtttct-ttgaacctcag-ttttt i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1303804 79 - 2164891 gaggagacatgtgtgactttgcagcggagcttccaggcacc-------------tgcaggcaggtcatgtgtttct-ttgaacttcag-ttttt i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1548645 63 - 1813869 CAGGAGA-----------------CGGCACTCCCAGGCACC-------------TGCAGGCAGGTCGTGTGTTTCT-TTGAATCTCAGTTTTTT i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10982779 63 - 12073884 -------------------tgccgCCTAG----CATGGGTCACTTT-----AGAAACTGCTAGATCTCATGTCTCTGCTCTTCCT--G-TCTTG i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56214011 68 + 122678785 -CTCAGAGGTGTGTGCGTGTGCAGCC-AGCCCCAAG---CCATCGCTC------TTCACGCAGGCTG-----CTCT-CT--------G-TTATT i canFam3.chr1 C 0 C 0 e dasNov3.JH569188 636599 987 + 760995 I a score=3184181.000000 s hg38.chr6_KB021644v2_alt 152469 355 + 185823 tcatcagtaaaa-at----gaggatgatcctgctcctccctggactcctggtgagggctgtaatgattatataaaatgaA--GAGGGAGTGTGTCCCTGTATGAGGCATCAGGAGCC-------AGTGTGGCCTCCCTG--------------GCAGCTTCTC-TCTGCCATGGGCCCTGCCTTGCTGTGGCTTCTCAGCCACCCTACGATGGATGGGACAGGG--------TGGGCCA----------------------GACCATCT-AGTCATATTTCTCCCAAAAG-CTTCTTAGTTGGAGTGG-TATTTTGCAACTGTAGA---AGAAGTGGAAAAG-ATAAGTTATGGATTAATTTAGAAACGGCCAGATATGGTCCCAT--TTTT---TGTGTGTTTTGTCATGCATCGAATGAGACAT s panTro5.chr6 173609236 355 + 175400573 tcatcagtaaaa-at----gaggatgatcctgctcctccctggactcctggtgagggctgtaatgattgtataaaatgaA--GAGGGAGCGTGTCCCTGTACGAGGCATCAGGAGCC-------AGTGTGGCCTCCCTG--------------GAAGCTTCTC-TCTGCCATGGGCCCTGCCTTGCTGTGGCTTCTCAGCCACCCTACGATGGATGGGACAGGG--------TGGACCA----------------------GACCACAT-AGTCATATTTCTCCCAAAAG-CTTCTTAGTTGGAGTAG-TATTTTGCAACTGTAGA---AGAAGTGGAAAAG-ATAAGTTATGGATTAATTTAGAAACGGCCAGATATGGTCCCAT--TTTT---TGTGTGTTTTGTCGTGCATCAAATGAGACAT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171842531 355 + 173848474 tcatcagtaaaa-at----gaggatgatcctgctcctccctggactcctggtgagggctgtaatgattgtataaaatgaA--GAGGGAGCGTGTCCCTGTACGAGGCATCAGGAGCC-------AGTGTGGCCTCCCTG--------------GAAGCTTCTC-TCTGCCATGGGCCCTGCCTTGCTGTGGCTTCTCAGCCACCCTACGATGGATGGGACAGGG--------TGGACCA----------------------GACCATAT-AGTCATATTTCTCCCAAAAG-CTTCTTAGTTGGAGTAG-TATTTTGCAACTGTAGA---ATAAGTGGAAAAG-ATAAGTTATGGATTAATTTAGAAACGGCCAGATATGGTCCCAT--TTTT---TGTGTGTTTTGTCGTGCATCAAATGAGACAT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11525632 355 - 12463322 tcatcagtaaaa-at----gaggatgatcctgctcctccctggactcctggtgagggctgtaatgattatataaaatgaA--GAGGGAGTGTGTCACTGTACAAGGCATCAGGAGCC-------AGTGTGGCCTCCCTG--------------GCAGCTTCTC-TCTGCCATGGGCCCTGCCTTGCTGTGGCTTCTCAACCACCCTACGATGGATGGGACAGGG--------TGGACCA----------------------GACCATCT-AGTCATATTTCTCCCAAAAG-CTTCTTAGTTGGAGTAG-TATTTTGCAACTGTAGA---AGAAGTGGAAAAG-ATAAGTTATGGATTAATTTAGAAACGGCCAGATATGGTCCCAT--TTTT---TTTGTGTTTTGTCATGCATCAAATGAGACAT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156358429 370 + 157873769 tcatcagtaaaa-ac----gagggtgatcctgcttctccctggactcctggtgaggGCTGTAATTATTATATAAAATGAA--GAGGGAGTGTGTCCCTGTACGAGGCATCAGAAGCC-------AGTGTGGCCTCCCTG--------------GCAGCCTCTC-TCTGCCATGGGCCCTGCCTTGCTGTGGCTTCTCAGCCACCCTACGATGGATGGGACAGGG--------TGGACCAGAGCTT----CTCGCAACAAGGGAACATCT-ACTCATATTTCTCCCAAAAG-CTTCTTAGTTGGAGCAG-TATTTTGCAACTGTAG------AAGTGGAAAAG-ATAAGTTATGGATTAATTTAGAAATGGCCAGATATGGTCCCAT--TTTT---TGTGTGTTTTGTCATGCATCGAATGAGACAT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170385880 376 + 172585720 taatccgtaaaa-at----gagggtggtcctgctcctccctggactcctggtgagggctgtaatgattacataaaatCAC--GAGGGAGCGTGTCCCTGTGTGGGGCATCAGGAGCC-------TGTCTGGCCTCCCTG--------------GCGGCTTCTC-TCTGCTGTGGCCCCTGCCTTGCTGTGGCTTCTCAGTCACCTTACCATGGATGAGACAGGG--------TGAGCCAGAGCTT----CTCGCAACAAGGAACCATCC-ACTCATATTTCTCCCAAAAG-CTTCTTAGTTGGAGCAG-TGTTTTGCAACTGTAGA---AGAAGTGGAAAAG-ATAAGTTATGGATTAATTTAGAGACGGCCAGATATGGTCCCAT--TTTTGTGTGTGTGTTTTGTCATGCATTGAATGAGACAT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169129170 376 - 170955103 taatccgtaaaa-at----gagggtggtcctgctcctccctggactcctggtgagggctgtaatgattacataaaatCAC--GAGGGAGCGTGTCCCTGTGTGGGGCATCAGGAGCC-------TGTCTGGCCTCCCTG--------------GCGGCTTCTC-TCTGCTGTGGCCCCTGCCTTGCTGTGGCTTCTCAGTCACCTTACCATGGATGAGACAGGG--------TGAGCCAGAGCTT----CTCGCAACAAGGAACCATCC-ACTCATATTTCTCCCAAAAG-CTTCTTAGTTGGAGCAG-TGTTTTGCAACTGTAGA---AGAAGTGGAAAAG-ATAAGTTATGGATTAATTTAGAGACGGCCAGATATGGTCCCAT--TTTTGTGTGTGTGTTTTGTCATGCATTGAATGAGACAT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8415902 376 + 10161646 taatcagtaaaa-at----gagggtggtcctgctcctccctggactcctggtgagggctgtaatgattacataaaatCAC--GAGGGAGCGTGTCCCTGTGTGGGGCATCAGGAGCC-------TGTCTGGCCTCCCTG--------------GCGGCTTCTC-TCTGCTGTGGCCCCTGCCTTGCTGTGGCTTCTCAGTCACCTTACCATGGATGAGACAGGG--------TGAGCCAGAGCTT----CTCGCAACAAGGAACCATCC-ACTCATATTTCTCCCAAAAG-CTTCTTAGTTGGAGCAG-TGTTTTGCAACTGTAGA---AGAAGTGGAAAAG-ATAAGTTATGGATTAATTTAGAGACGGCCAGATATGGTCCCAT--TTTTGTGTGTGTGTTTTGTCATGCATTGAATGAGACAT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1446265 373 + 3144229 taatcagtaaaa-at----gagggTGGTCCTGCGCCTCCCTGGACTCCTGCTGAGGGCTGTAATGATTACATAGAATCAC--GAGGGAGCGTGTCCCTGTGTGAGGCATCAGGAGCC-------TGTCTGGCCTCCCTG--------------GCGGCTTCTC-TCTGCTGTGGGCCCTGCCTTGCTGTGGCTTCTCAGCCACCTTACCATGGATGAGACAGGG--------TGAGCCAGAGCTT----CTCGCAACAAGGAACCATCC-ACTCATATTTCTCCCAAAAG-CTTCTTAGTTGGAGCAG-TATTTTGCAACTGT------AGAAGTGGAAAAG-ATAAGTTATGGATTAATTTAGAGACGGCCAGATATGGTCCCAT--TTTTGTGTGTGTGTTTTGTCATGCATTGAATGAGACAT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96731856 376 + 98384682 taatcagtaaaa-at----gagggtggtcctgctcctccctggactcctggtgagggctgtaatgattacataaaatCAC--GAGGGAGCGTGTCCCTGTGTGAGGCACCAGGAGCC-------CGTCTGGCCTCCCTG--------------GCAGCTTCTC-TGTGCCATGGGCCCTGCCTTGCTGTGGCTTCTCAGTCACCCTACCATGGATGGGACAGGG--------TGAGCCAGAGCTT----CTCGCAACAAGGAACCATCC-ACTCATATTTCTCCCAAAAG-CTTCTTAGTTGGAGCAG-GATTTTGCAATAGTAAA---AGAAATGGGAAAG-ATAAGTTATGGATTAATTTAGAGACGGCCAAATATGGTCCCAT--TTTTGTGTGTGTGTTTTGTCATGCATTGAATGAGACAT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8278333 373 - 10857215 taatcagtaaaa-at----gagggttgtcctgctcctccctggactcctgctgaggGCTGTAATGATTACATAGAATCAC--GAGGGAGCGTGTCCCTGTGTGTGGCATCAGGAGCC-------TGTCTGGCCTCCCTG--------------GCGGCTTCTC-TCTGCTGTGGGCCCTGCCTTGCTGCGGCTTCTCAGCCACCCTACCATGGATGAGACAGGG--------TAAGCCAGAGCTT----CTCGCAAAAAGGAACCATCC-ACTCATATTTCTCCCAAAAG-CTTCTTAGTTGGAGCAG-TATTTTGCAACTGT------AGAAGTGGAAAAG-ACAAGTTATGGATTAATTTAGAGACGGCCAGATATGGTCCCAT--TTTTGTGTGTGTGATTTGTCATGCATTGAATGAGACAT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15657827 375 - 23502949 taatcagtaaaa-ac----gagggtggtcctgctcctccctggactcctggtgagggctgtaatgattacataaaatCAA--GAGGGAGTGTGTCCCTGTGTGAGGCATC-GGGGCC-------CGTCTGGCCTCCCTG--------------GTGGCTTCTC-TCTGCTGTGGGCCCTGCCTTGCTGTGGCTTCTCAGCCACCCTACCATGGATGGGATAGGG--------TGGGCCAGAGCTT----CTCGCAACAAGGAACCATCC-ACTCATATTTCTCCCAAAAG-CTTCTTAGTTGGAGCAG-TATTTTGCAACTGTAGA---AGAAGTGGAAAAT-ATAAGTTATGGATTAATTTAGAGACGGCCAGATATGGTCCCAT--TTTTGTGTGTGTGTTTTGTCATGCACTGAATGAGACAT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169939393 368 + 171630274 tcttcagtaaaa-at----gaggatgaccctgatccttcctggactcatggtgagggctataatgattatgtaaaATCAA--GAGGGCATGTGCCCCTGTATGAGGCAGCAGGAGCC-------AGTCCGGCCTTCCTG--------------GCGGCTTCTC-TCTGCTGTGGGCTCTGCCTTGCTGTGGCTTCTCAGCCACCCCATGATGGATGAGACAGCG--------TGGACCGGAGCTT----CTCGCAACAAGACACCATCT-ACTCATTTCTC-CCCAAGGG-CTTCTTGGTTGGAACTG-TATTTTGCAACTGTGGA------AGTGGG-AAG-AGAAGTTACGGA-TAACTTAGGAATGGCCAGATATGGTCCCTTA-TTTT---TTTGTCTTTTGGCATGAATCAAATGAGACAT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1339844 371 - 2905041 tcttcagtaaaa-at----gaaaatgaccctggtcctccctGGACTCCTGGTGAGGGCCATAACAATTACGTAAAGTCAA--GAGGGCATGTGCCCCCGGATGAGGCACCAGGAGCC-------AGTCTGGCCTTCCTG--------------GTGGCTTCTC-TCTGCTGTGGGATCTGCCTTGCTGTGGCTTCTCAGCCACCCCAGGATGGATGGGACAGCG--------TGGACCAGAGCTT----CTCGCAACAAGACACCATTT-ACTCATTTATC-CCAAAGGG-CTTCTTAGTTGGAGCCA-TAATTTGCAACTATGAA----GCAGTGGG-AAG-ATAAGTTATGGA-TAACTTAGAAATGGCCAGATACGGTCCCTTATTTTT---TTTGTCTTTTGGCATGCATCAAATGAGACAT i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1303883 370 - 2164891 tcttcagtaaaa-at----gaggatgaccctggtcttccctggactcctggtgagggccataatgattatgtaAAGTCAA--GAGGGCATGTGCCCCCCTACGAGGCACCAGGAGCC-------AGTCTGGCCTTCCTG--------------GCGGCTTCTC-TCTGCCGTGGGCGCTGCCTTGCTGTGGCTTCTCAGCCACCCCACGATGGATGAGACAGCA--------GGGACCAGAGCTT----CTCACAACAAGACGCCATCT-ACTCATTTCTC-CGAAAGGG-CTTCCTAGTTAGAGCCA--AATTTACAACTATAGA---AGCAGTGGG-AAG-ATAAGCTATGGA-TAACTTAGAAATGGCCAGATATGGTCCCTTA-CTTT---TTTATCTTTTGGCATGCATCAAATGAGACGT i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1548708 371 - 1813869 TCTTCAGTAAAA-AT----GAGGATGACCCTTGTCCTCCCTGGACTCCTGGTGAGGGCCATAATGATTGTGTAAAGTCAA--GAGGGCATGTGCCCCCGTGTGAGGTGCCAGGAGCC-------AGTCTGGCCTTCCTG--------------GCGGCTTCTC-TCTGCTGTGGGTGCTGCCTTGCTGTGGCTTCTCGGCCACCCCATGGTGGATGGAACAGTG--------TGGATCAGAGCTT----CTTGCAACAAGACACCATCT-ACTCATTTCTC-CCAAAGGG-CTTCTTAGTTGGAGCCG-TATTTTGCAATTGTAGA---AGAATTGGG-AAG-ATAAGTTATGGA-TAACTTAGAAATGCCCCGATATGGTCCCTTG-TTTT---TCTGTCTTTTGGCATGCATCAAATGAGACAT i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10982842 264 - 12073884 CCATGCACAAAGTCT----GGGGAGCAGACTGATTTCTCTTGGCTTT-------------------GTATGTGAGAT-AA--GAGATGGTGGGTGCC------------CAGGA--------------TGCTCCCCCTGAAGTTAAATTATGAGTGAGATCAC--CCACCATATGCC---TCTTACTATCCCCTAGAGGCCACC----------TGCCTTGGGG--------ATGGCCAG---------------------------------------TCTCTCAAG------------------------------CCGACAAA---CGAAGCAGGAAGGAAccagtta------aatttgaatat---tagataaggaacaaa--tgac--ctgtcggtataatcat--atcccatgagacat i otoGar3.GL873575 C 0 I 80 s canFam3.chr1 56214079 372 + 122678785 CAATCAGCAAGA-ATGGGGGGGGGGGGTGCAGGT-CTCCTTGAACCTGTGGTGACAG---------TTTTGCACAACTAA--AAGTGGGGCTGCTC---------ACACGAGGAGTCTCATCTTTGCACAGCTTTTGCA--------------AAGGCTTTTCTTCCATGGAGGGCACACCTTTGGTATG---CATCAGCCACC-TGCCGTGGATGGAGTGGCA--------GAGGTGTGGTCATGGGACTTCCTAGAATCCACCACCTGACTCCCAGCTCTTCCAAAGGACTTCTGAGTTGGGACATTTATTTTACACCCACAGA---AGGAATGGGAAAG-ATAAACTATGGACCAACGAAGCAATGCCCAGCCATGGCCCCTT--ATTTTAGCTTGTGCTGTGGCAAACATTAAACAAGACCC i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 637586 373 + 760995 tcatctttaaaa-at----aaggatactaatactgtccagtgggcttat---------tgtgatgattattcaaaaataaatataagagcacAAACTCAAAGGTGGCATCATTGTTA-------TTTAAGTGCTCCCCC--------------AGAGGTGCTT-TGCAGCAGTACATTTACATTAATGTGGCTAATCTACCATCTTGCAAAAGATGGTGGAAAGGTGGTGCTTGGATCATAGCTT----CTCTCAACAAATGACTATCT-GACTAAGATCTTCCAAAGGA-CTTCCTAGTTGGGTACT-GATTTTGCAACCATTGAATGAGGAGAAGAAAAG-ATAAATTATGGATCAATTTAGAAATGACCAGACATGGTCCGTT--TATT-------TCTTCTACCATACATGGAATGAGACCT i dasNov3.JH569188 I 987 C 0 a score=2185854.000000 s hg38.chr6_KB021644v2_alt 152824 243 + 185823 AAGTAGTGATTTGAAGAATACGCTGTTTAAAACTGGCTTCGGGCAGGAGATGGGGGAGG--GGGTGTCCTGACAGCCCAGCCTTAAGGGAACTGTTCACTGAAGCTAAATTATCAGTGAGATAACTCACCAGAGGCCCCCACTGTC--------------------------------------TGCCCT-GG---GATG-TCTGTT-Ttaggatggacagactt--------ggccaacatgcaa--------------acaaaacagggcacctcattaaactcaaatatcacacaagcaagggatatt- s panTro5.chr6 173609591 243 + 175400573 AAGTAGTGATTTGAAGAATACGCTGTTTAAAACCGGCTTCAGGCAGGAGATGGGGGAGG--GGGTGTCCTGACAGCCCAGCCTTAAGGGAACTGTTCACTGAAGCCAAATTATCAGTGAGATAACTCACCAGAGGCCCCCACTGTC--------------------------------------TGCCCT-GG---GATG-TCTGTT-Ttaggatggacagactt--------ggccaacacgcaa--------------acaaaacagggcacctcattaaactcaaatatcacacaagcaagggatatt- i panTro5.chr6 C 0 C 0 s panPan2.chr6 171842886 243 + 173848474 AAGTAGTGATTTGAAGAATACGCTGTTTAAAACCGGCTTCAGGCAGGAGATGGGGGAGG--GGGTGTCCTGACAGCCCAGCCTTAAGGGAACTGTTCACTGAAGCCAAATTATCAGTGAGATAACTCACCAGAGGCCCCCACTGTC--------------------------------------TGCCCT-GG---GATG-TCTGTT-Ttaggatggacagactt--------ggccaacacgcaa--------------acaaaacaggacacctcattaaactcaaatatcacacaagcaagggatatt- i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11525987 244 - 12463322 AAGTAGTGATTTGAAGAATACGCTGTTTAAAACCGGCTTCGGGCAGGAGATGGGGGAGG--GAGTGTCCTGACAGCCCAGCCTTAAGGGAACTGTTCACTGAAGCTAAATTATCAGTGAGATAACTCACCAGAGGCCCCCACTGTC--------------------------------------TGCCCT-GG---GATG-TCTGTTGCtaggatggacagactt--------ggccaacacgcaa--------------acaaaacaggacacgtcattaaactcaaatatcacacaagcaagggatatt- i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156358799 244 + 157873769 AAGTAGTGATTTGAAGAATATGCTGTTTAAAACTGGCTTCGGGCAGGAGATGGGGGAGG--GGGTGTCCTGACAGCCAAGCCTTAAGGGAATTGTTCACTGAAGCTAAATTATCAGTGAGATAACTCACCAGAGGCCCCCACTGTC--------------------------------------TGCCCT-GG---GATG-TCTGTAGCtaggattgacagactt--------ggccaacacgcaa--------------acaaaacaggacacctcattaaactcaaatatcagacaagcaagggatatt- i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170386256 243 + 172585720 AAGTAGTGATTTGAAGAATATACTGTTTAAAACTGGCTTCAGGCAGGAGATGGTGGAGG--GGGTGTCCTGACAGCCAAGCCTTAAGGGAATTGTTCACTGAAGCTAAATAATCA-TGAGGTAACTCACCAGAGGCTCCCGCTGTC--------------------------------------TGCCCT-GG---GATG-TCTGTAGCtaggattgacagactt--------ggccaacatgcaa--------------acgaaacaggacaccttgttaaactcaaatatcagataagcaagggatact- i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169129546 243 - 170955103 AAGTAGTGATTTGAAGAATATACTGTTTAAAACTGGCTTCAGGCAGGAGATGGCGGAGG--GGGTGTCCTGACAGCCAAGCCTTAAGGGAATTGTTCACTGAAGCTAAATAATCA-TGAGGTAACTCACCAGAGGCTCCCGCTGTC--------------------------------------TGCCCT-GG---GATG-TCTGTAGCtaggattgacagactt--------ggccaacatgcaa--------------acgaaacaggacaccttgttaaactcaaatatcagaaaagcaagggatact- i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8416278 243 + 10161646 AAGTAGTGATTTGAAGAATATACTGTTTAAAACTGGCTTCAGGCAGGAGATGGCGGAGG--GGGTGTCCTGACAGCCAAGCCTTAAGGGAATTGTTCACTGAAGCTAAATAATCA-TAAGGTAACTCACCAGAGGCTCCCGCTGTC--------------------------------------TGCCCT-GG---GATG-TCTGTAGCtaggattgacagactt--------ggccaacatgcaa--------------acgaaacaggacaccttgttaaactcaaatatcagataagcaagggatact- i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1446638 243 + 3144229 AAGTAGTGATTTGAAGAATATGCTGTTTAAAACTGGCTTCAGGCAGGTGATGGTGGAGG--GGGTGTCCTGACAGCCAAGCCTTAAGGGAATTGTTCACTGAAGCTAAATAATCA-TGAGATAAGTCACCAGAGGCCCCCGCTGTC--------------------------------------TGCCCT-GG---GATG-TCTGTAGTtaggactgacagactt--------ggccaacatgcaa--------------acgaaacaggacaccttgttaaactcaaatatcagataagcaagggatact- i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96732232 243 + 98384682 AAGTAGTGATTTGAAGAATATGCTGTTTAAAACTGGCTTCAGGCAGGAGATGGCGGAGG--GGGTGTCCTGACAGCCAAGCCTTAAGGGAATTGTTCACTGAAGCTAAATAATCG-TGAGATAACTCACCAGAGGCCCCCTCTGTC--------------------------------------TGCCCT-GG---GATG-TCTGTAGCtaggattgacagactt--------ggccaacatgcaa--------------acgaaacaggacaccttgttaagctcaaatatcagataagcaagggatact- i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8278706 243 - 10857215 AAGTAGTGATTTGAAGAATATGCTGTTTAAAACTGGCTTCAGGCAGGTGATGGGGGAGG--GGGTGTCCGGACAGCCAAGCCTTAAGGGAATTGTTCACTGAAGCTAAATAATCA-CGAGATAAGTCACCAGAGGACCCCACTGTC--------------------------------------TGCCCT-GG---GATG-TCTGCAGTtaggattgacagactt--------ggccaacatgcaa--------------acgaaacaggacaccttgttaaagtcaaatatcagataaccaagggatact- i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15658202 243 - 23502949 AAGTAGTGATTTGAAGAATATGCTGTTTAAAACTGGCTTTAGGCAGGAGATGGGGAAGG--GGGTGTCCTGACAGCCAAGCCTTAAGGGAATTGTTCACTGAAGCTGAATAATCA-TGAGATAACTCACCAGAGGCCTCCACTGTC--------------------------------------TGCCCT-GG---GATG-TCTGTAGTtaggattgacagactt--------ggccaacatgcaa--------------acgaaacaggacaccttgttaaactcaaatatcagagaagcaagggatact- i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169939761 236 + 171630274 GATTCATGATTTGAAGAACACGCTGTTTAAAACTGTTGTTGGGCTTGAGGCAGGGGAAGGTGGGTGTCCTGACATCC-AGCCCTAAGGGATTCTTTCACTGATGCTCAAGTATCAGTGAGGTAGCTCGCCAGAGGCCCCCACTGCC--------------------------------------TCCCCT-GA---GATG-CCTGTAGCTA-----GACAGACCT--------GGCCAACATGCAA--------------ACAAAACAGGACACCCTGTTACACTCAAACATCAAATAGGTAATAAA----- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1340215 233 - 2905041 GATTAGTGATTTGAAGAACATATTGTTTAAAACTGTCTTTGGGCTTGAGGT-GAGAAAGATGGATGTCCTGACATCC-AGCCTTAAGGGATTCTTTCACTGAAGCTCAATTATCAGTGAGGTAACTCGCCAGAGGCCCCCACTGCC--------------------------------------TCCCCT-GA---GATG-TCTGTAGCT-------Acagactt--------ggccaacatgcaa--------------acaaaacaagacaccttgttaaactcaaatatcaaataagtaataaa----- i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1304253 227 - 2164891 GATTAGTGATTTGAAGAACATGCTGTTTAAAACTGTCTTTGGTCTTGAGGTAGGGGAAGATGGGTGTCCTGACATCC-AGCCTCAAGGGATTCTTTCACTGAAGCTCAATTATCAGTGAGGTAACTCACCAGAGGCCCCCA-----------------------------------------------CT-GA---GATG-TCTGTAACTA-----GAcagactt--------ggccaacatacaa--------------acaaaacaggacaccctgttaaactcaaatatcaaataaggaataaa----- i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1549079 236 - 1813869 GATTAGTGATTTGAAGAACATGCTGTTTAAAATGGTCTTTGGGCTTGAGGTAGGGGAAGATGGGTGTCCTGACATCT-AGCCTTAAGGGATTCTTTCACTGAAGCTCAATCATCAGTGAGGTAACTCGCCAGAGGCCCCCACTGTC--------------------------------------TCCCCT-GA---GATG-TCTGTAGCTA-----AAcagactt--------ggccaacatgcaa--------------acaaaacaggacaccctgttaaactcaaatatcaaataagtaataaa----- i aotNan1.NW_018494782v1 C 0 C 0 s canFam3.chr1 56214451 257 + 122678785 AAGTAGTG--TTGAAGAACTTACTCTTCAAAACTGCTTT--GGCACGAGACAAGGGAAGATGTGTACACTAATGTTCTAGGCTAATGGGATTTTTCCATTTCAGTTACATTATTGGTCAGATGGTCGACCAGTTTCTTCCCACGCT--------------------------------------GACCCTAGA---GGTACTCTGCACCTgggtctgccagattt--------aacaagcaggtcagcaaacacaaacttacaaaaccaagtacccagttcaacccgaatatca-ataaacattgaataac- i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 637959 281 + 760995 -AATACTGAATTGACGGATGTACTATTTAAAATTAACTTT-CACGTGAAACAAAAGAGA----------TTGCATTCAAGCCTTAATGGA-TTTTCCATTAAAATTAAATTATTCATCAGATAATCCACAAGACGCCCCCTTTCCCCCAAAATacacacacacacacacacacacacacacTTTTTCCTT-GGAGAAACT-CTTATATCtaggacagccaggtttaaaaaacaaacaaacaaacaa--------------acaaagcaggatgcc--attaaatttgagtaccaaataaacaatgacaattt i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10983106 80 - 12073884 I a score=1092557.000000 s hg38.chr6_KB021644v2_alt 153067 115 + 185823 cttttagtgtcattatatgccatgaaatgtttgggacatacttatgct-aaaaaaaaattacagtctaccctcaattgaaattcagctt-g-tgtcctgtattttatgtggca-----------atccC--------- s panTro5.chr6 173609834 116 + 175400573 cttttagtgtcattatatgccatgaaatgtttgggacatacttatgctaaaaaaaaaattacagtctaccctcaattgaaattcagctt-g-tgtcctgtattttatgtggca-----------atccC--------- i panTro5.chr6 C 0 C 0 s panPan2.chr6 171843129 115 + 173848474 cttttagtgtcattatatgccatgaaatgtttgggacatacttatgct-aaaaaaaaattacagtctaccctcaattgaaattcagctt-g-tgtcctgtattttatgtggca-----------atccC--------- i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11526231 116 - 12463322 cttttagtgtcattatatgccatgaaacgtttgggacatacttatgctaaaaaaaaaattacagtctaccctcaattgaaattcaactt-g-tgtcctgtattttatgtggca-----------atccC--------- i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156359043 115 + 157873769 cttttagtgtcattatgtccaatgaaatgtttgggacatacttatgct-aaaaaaaaattacagtctaccctcaattgaaattcaactg-g-tgtcctgtattttatgtggca-----------atccC--------- i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170386499 113 + 172585720 cttttagtgtcattatatcccatgaaatgtttgggacatacttacgct---aaaaaaattacagtctacactcaattgaagttcagctg-g-tatcctgtattgcatatggca-----------atccC--------- i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169129789 113 - 170955103 cttttagtgtcattatatcccatgaaatgtttgggacatacttacgct---aaaaaaattacagtctacactcaattgaagttcagctg-g-tatcctgtattgcatatggca-----------atccC--------- i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8416521 113 + 10161646 cttttagtgtcattatatcccgtgaaatgtttgggacatacttacgct---aaaaaaattacagtctacactcaattgaagttcagctg-g-tatcctgtattgcatatggca-----------atccC--------- i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1446881 113 + 3144229 cttttagtgtcattatatcccatgaaatatttgggacatacttacgct---aaaaaaattacagtctacactcaattgaagttcaactg-g-tgtcctgtattgtatatggca-----------atccC--------- i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96732475 114 + 98384682 cttttagtgtcattatatcccaggaaatgtttgggacatacttatgct--aaaaaaaattacagtctaccctcaattgaaattcaactg-g-tgtcctgtattttatgtggca-----------atccC--------- i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8278949 113 - 10857215 cttttagtgtcattatatcccatgaaatgtttgggacatacttacgct---aaaaaaattacagtctacactcaattgaagttcaactg-g-tgtcctgtattgtatatggca-----------atccC--------- i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15658445 114 - 23502949 cttttagtgtcattatatctcatgaaatgtttgggacatacttatgct--aaaaaaaattacagtctaccctcaattgaaattcagctg-g-tgtcctgtattttatgtggca-----------atccC--------- i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169939997 77 + 171630274 --------------ACAGCCCATGAAATGTTTGGGACATTCTTATGCT-GAAAAGAAAATACCATCTACCCTCAACTGAAATTCCACTG-G-TG-------------------------------------------- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1340448 101 - 2905041 --------------atagcccatgaaatgtttgggacattcttatgct-aaaaagaaaatacagtctacccgcaactgaaattcctctg-g-tgtcctgtattttacgtggca-----------atccc--------- i saiBol1.JH378287 C 0 I 20 s cebCap1.NW_016107695v1 1304480 101 - 2164891 --------------atagcccatgaaatgtttgggacattcttatgcc-aaaaagaaaatacagtctaccctcaactgaaattccactg-g-tgtcctgtattttatgtggca-----------atccc--------- i cebCap1.NW_016107695v1 C 0 I 20 s aotNan1.NW_018494782v1 1549315 101 - 1813869 --------------atagcccatgaaatgtttggaacattcttatgct-aaaaagaaaatacagtctaccctcaattgaaattccactg-g-tgtcctgtattttacgtggca-----------atccc--------- i aotNan1.NW_018494782v1 C 0 I 33 s otoGar3.GL873575 10983186 113 - 12073884 ctcttggtataatcatatcccatgcgaca-ctggggtgcacttacact---agtaaaattatggcttaccttcaattgacactagatggag-tgtcctacatcttATCTAGAA-----------ACTTC--------- i otoGar3.GL873575 I 80 I 8 s canFam3.chr1 56214708 117 + 122678785 tttttagtataagtatgtcccatgcaaggattggggcatacttggagtaacgaaaaacatattgtttacctacaagtagcatttaaccggg-tgtcctgtattttacctggca-----------aatct--------- i canFam3.chr1 C 0 I 10 s dasNov3.JH569188 638240 134 + 760995 tttttagtataagtatgccccatgcaatatttgggacatacttataat---aaaaatatttgtttttaccttcaattaaaatttcactg-gctgttatgtattgtatttgGCAACTTTATCTGTATCCCAAGCAGCCC i dasNov3.JH569188 C 0 C 0 a score=77243.000000 s hg38.chr6_KB021644v2_alt 153182 15 + 185823 TGAGCTGACCTGCTG- s panTro5.chr6 173609950 14 + 175400573 TGAGCTGACCTGCT-- i panTro5.chr6 C 0 C 0 s panPan2.chr6 171843244 14 + 173848474 TGAGCTGACCTGCT-- i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11526347 14 - 12463322 TGAGCTGACCTGCT-- i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156359158 14 + 157873769 TGAGCAGACCTGCT-- i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170386612 14 + 172585720 TGAGCAGAACTGCT-- i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169129902 14 - 170955103 TGAGCAGAACTGCT-- i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8416634 14 + 10161646 TGAGCAGAACTGCT-- i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1446994 14 + 3144229 TGAGCAGACCTGCT-- i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96732589 14 + 98384682 TGAGCAGACCTGCT-- i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8279062 14 - 10857215 TGAGCAGACCTGCT-- i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15658559 14 - 23502949 TGAGCAGACCTGCT-- i colAng1.NW_012114488v1 C 0 C 0 s saiBol1.JH378287 1340569 13 - 2905041 TGAGCAG-CCTGCA-- i saiBol1.JH378287 I 20 C 0 s cebCap1.NW_016107695v1 1304601 13 - 2164891 TGAGCAG-CCTGCA-- i cebCap1.NW_016107695v1 I 20 C 0 s otoGar3.GL873575 10983307 14 - 12073884 CACAGAGATCTGGG-- i otoGar3.GL873575 I 8 C 0 s canFam3.chr1 56214835 14 + 122678785 CAAGTAGTCCTCTG-- i canFam3.chr1 I 10 I 7 s dasNov3.JH569188 638374 14 + 760995 TAAGTGG-TCTGCT-G i dasNov3.JH569188 C 0 C 0 e aotNan1.NW_018494782v1 1549416 33 - 1813869 I e calJac3.chr4 169940074 0 + 171630274 C a score=2871978.000000 s hg38.chr6_KB021644v2_alt 153197 283 + 185823 GGTCCATAGAGGGCAGCCTGGCTCATCCTGAAGGCTTGAGGTGTCCCCGT--AAGCTGTGCAGAGCTCTGATTTCCTGATAAAGTCACCATTTC-------------------TGGTACTG-------------------CAGGGGTGACAATGTGTTCTACAAGAAATTTTAAATTCATTTCAAAA-ATTATCTAACAAAATTAATCTAAGAAATCCCACAATACCTGCATGACCACAGATAACCAAGTAATCCCATTAC--AATGACATGGCGTCCTTGTTCAGCAGGCGTTTCTTTTTGTGTTTCTCATTAAATGATCA-------------GCAA s panTro5.chr6 173609964 282 + 175400573 GGTCCATAGAGGGCAGCCTGGGTCATCCTGAAGGCTTGAGGTGTCCCCGT--AAGCTGTGCAGAGCTCCGATTTCCTGATAAAGTCACCATTTC-------------------TGGTACTG-------------------CAGGGGTGATAATGTGTTTTACAAGAAATTTTAAA-TCATTTCAAAA-ATTATCTAACAAAATTAATCTAAGAAATCCCACAATACCTGCATGACCACAGATAACCAAGTAATCCCATTAC--AATGACATGGCGTCCTTGTTCAGCAGGCGTTTCTTTTTGTGTTTCTCATTAAATGATCA-------------GCAA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171843258 282 + 173848474 GGTCCATAGAGGGCAGCCTGGGTCATCCTGAAGGCTTGAGGTGTCCCCGT--AAGCTGTGCAGAGCTCCGATTTCCTGATAAAGTCACCATTTC-------------------TGGTACTG-------------------CAGGGGTGATAATGTGTTTTACAAGAAATTTTAAA-TCATTTCAAAA-ATTATCTAACAAAATTAATCTAAGAAATCCCACAATACCTGCATGACCACAGATAACCAAGTAATCCCATTAC--AATGACATGGCGTCCTTGTTCAGCAGGCGTTTCTTTTTGTGTTTCTCATTAAATGATCA-------------GCAA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11526361 283 - 12463322 GGTCCATAGAGGGCAGCCTGGCTCATCCTGAAGGCTTGAGGTGTCCCCGT--AAGCTGTGCAGAGCTCTGATTTCCTGATAAAGTCACCATTTC-------------------TGGTACTG-------------------CAGGGGTGATAATGTGTTCAACAAGAAATTTTAAATTCATTTCAAAA-ATTATCTAACAAAATTAATCTAAGAAATCCCACAATACCTGCATGACCACAGATAACCAAGTAATCCCATTAC--AATGACATGGCGTCCTTGTTCAGCAGACGTTTCTTTTTGCGTTTCTCATGAAATGATCA-------------GCAA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156359172 281 + 157873769 GGTCCATAGAGGTCAGTCTGGCTCATCCTGAACGTTT--GGTGTCCCTGT--AAGCTGTGCAGAGCTCTGATTTCCTGATAAAGTCACCATTTC-------------------TGGTACTG-------------------CAGGGGTGATAATGTGTCCTACAAGAAATTTTAAATTCATTTCAAAA-ATTATCTAACAAAATTAATCTAAGAAATCCCACAATACCTGCATGACCACAGATAACCAAGTAATCCCATTAC--AGTGGCATGGCGTCTTTGTTCAGCAGGCGTTTCTTTTTGTGTTTCTCCTGAAATGATCA-------------GCAA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170386626 294 + 172585720 GGTCCATAGAGGGCACCCTGGCTCATCCTGCAGGCTTGAGGTGTCCC-GT--AAGCTGTGCAGAGCTCTGATTTCCAGATAAAGTCACCATTTC-------------------TAGTACTG-------------------CAGGGGTGATCATGTGTTCTACAAGACATTTTCAATTCATTTCAAAA-ATTATCTAACAAAATTAGTCTAAGAAATCCCACAATACCTGCATGACCACAGATAACGAAGTAATTCCATTAC--AATGACATGGCATCCTTGTTCAGC-GGCGTTTCTTTTTGTGTTTCTCATTAAATAATCATGATCGCCTCATGAAAA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169129916 294 - 170955103 GGTCCATAGAGGGCACCCTGGCTCATCCTGCAGGCTTGAGGTGTCCC-GT--AAGCTGTGCAGAGCTCTGATTTCCAGATAAAGTCACCATTTC-------------------TAGTACTG-------------------CAGGGGTGATCATGTGTTCTACAAGACATTTTCAATTCATTTCAAAA-ATTATCTAACAAAATTAGTCTAAGAAATCCCACAATACCTGCATGACCACAGATAACGAAGTAATTCCATTAC--AATGACATGGCATCCTTGTTCAGC-GGCGTTTCTTTTTGTGTTTCTCATTAAATAATCATGATCGCCTCATGAAAA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8416648 294 + 10161646 GGTCCATAGAGGGCACCCTGGCTCATCCTGCAGGCTTGAGGTGTCCC-GT--AAGCTGTGCAGAGCTCTGATTTCCAGATAAAGTCACCATTTC-------------------TAGTACTG-------------------CAGGGGTGATCATGTGTTCTACAAGACATTTTCAATTCATTTCAAAA-ATTATCTAACAAAATTAGTCTAAGAAATCCCACAATACCTGCATGACCACAGATAACGAAGTAATTCCATTAC--AATGACATGGCATCCTTGTTCAGC-GGCGTTTCTTTTCGTGTTTCTCATTAAATAATCATGATCGCCTCATGAAAA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1447008 294 + 3144229 GGTCCATAGAGGGCACCCTGGCTCATCCTGCAGGCTTGAGGTGTCCC-GT--AAGCTGTGCAGAGCTCTGATTTCCAGATAAAGTCACCATTTC-------------------TGGTACTG-------------------CAGGAGTGATCATGTGTTCTACAAGACATTTTAAATTCATTTCAAAA-ATTATCTAACAAAATTAGTCTAAGAAATCCCACAATACCTGTATGACCACAGATAACGAAGTAATTCCATTAC--AATGACATGGCATCCTTGTTCAGT-GGCGTTTCTTTTTATGTTTCTCATGAAATAATCATGATCGCCTCATGAAAA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96732603 294 + 98384682 GGTCCATAGAGGGCACCCTGGTTCATCTTGCAGGCTTGAGGTGTCCC-GT--AAGCTGTGCAGAGCTCTGATTTCCAGATAAAGTCACCATTTC-------------------TAGTACTG-------------------CAGGGGTGATCATGTGTTCTACAAGAAATTTTAAATTCATTTCAAAA-ATTATCTAACAAAATTAGTCTAAGAAATCCCACAATACCTGTATGACCACAGATAACGAAGTAATTCCATTAC--AATGACATGGCATCCTTGTTCAGC-AGCGTTTCTTTTTATGTTTCTCATGAAATAATCACGATCGCCTCATGAAAA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8279076 294 - 10857215 AGTCCATAGAGGGCACCCTGGCTCCTCCTGCAGGCTTGAGGTGTCCT-GT--AAGCTGTGCAGAGCTCTGATTTCCAGATAAAGTCACCATTTC-------------------TAGTACTG-------------------CAGGGGTGATCATGTGTTCTACAAGAAATTTTAAATTCATTTCAAAA-ATTATCTAACAAAATTAGTCTAAGAAATCCCACAATACCTGTATGACCACAGATAACGAAGTAATTCCATTAC--AATGACATGGCATCCTTGTTCAGT-GGCGTTTCTTTTTATGTTTCTCATGAAATAATCATGATCGCCTCATGAAAA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15658573 294 - 23502949 GGTCCATAGAGGGCGCCCTGGCTCATCCTGCAGGCTTGAGGTGCCCC-GT--AAGCTGTGCAGAGCTCTGATTTCCGGATAAAGTCACCATTTC-------------------TGGTGCTG-------------------CAGGGGTGATCATGTGTTCTACAAGAAATTTTAAATTCATTTCAAAA-ATTATCTAACAGAATGAGTCTAAGAAATCCCACAACACCTGTATGACCACAGATAACCGAGTAATTCCATTAC--AATGACATGACATCCTTGTTCAGC-ACCGTTTCTTTTTGTGTTTCTCATGAAATAATCATGATCACCTCATGAAAA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169940074 269 + 171630274 --TCCACGGAGGGCTGCCTGGCTCATCCTGAAGGCCCGAGGTGTCGCCGT--AAGCTGTGCAGAGCTCTGATTTCCTGATAAAGTCACCGTTTC-------------------TGGTATTG-------------------CAGAGGCGATCGTGTGTTCCACAAGAAATTTTAAATTCATTT-AAAA-ATGATCTGGCAAAATGAGTCTGAGAAATCCCACAATACCTGAATGACCACAGAAAACCAAG-----------T--GATGTGGTGGCATCCTTGTTCAGCAGGCGTTTCTTTTCGTGTTTCTCCTGAAATTATCC-------------GCCA i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1340582 283 - 2905041 GATCCATGGAGGGCAGCCTGGCTCATCCTGAAGGCCAGAGGTGTCGCCGT--AAGCTGTGCAGAGCTCTGACTTCCTAATAAAGTCACCATTTC-------------------TGGTACTG-------------------CAGGGGTGATCATGTGTTCCACAAGAAATTTTAAATTCATTTAAAAA-ATGATCTGACAAAATTAGTCTGAGAAATCCCACAATACCTGTATGAGCACAGATAACGAAGCGATGCCATTAC--GATGTTGTGACATCCTTGTTCAGCAGGCATTTCTTTTTGTGTTTCTTATGAAATTATCA-------------ACCA i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1304614 280 - 2164891 GGTCCACGGAGGGCAGCCTGGCTCATCCTGAAGGCCAGAGGTGTCACCGT--AAGCTGTGCAGAGCTCTGATTTCCTAATAAAGTCACCATTTC-------------------TGGGACTG-------------------CAGGAGTGATCATGTGTTCCACGAGGAATTTTAAATTCATTTAAAAA-ATGATCTGACAAAATTAGTCTGAGAAATCCCATAATACCTGTATGACCACAGATAACCAAGCGATGCCATTAC--GAT---GTGGCTTCCTTGTTCAGCAGGCGTTTCTTTTTGTGTTTCTCATGAAATTATCA-------------GCCA i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1549449 280 - 1813869 GGTCCACGGAGGGCAGCCCAGCTCTTCCTGAAGGGCGGAGGTGTTGCTGT--AAGCTGTGCAGAGCTCTGACTTCCTAATAAAGTCACCATTTC-------------------TGGTACTG-------------------CAGGGGTGATCATGTGTTCCACAAGAAATTTTAATTTCATTTAAAAA-ATGATCTGACAAAATTAGTCTGAGAAATCCCACAATACCTGTATGACCACAGATAACCAAGTGATGCCGTTAC--GAC---TTGGCGTCCTTGTTCAGTAGGAGTTTCTTTTCGTGTTTCTCATGAAATTATCA-------------GCCA i aotNan1.NW_018494782v1 I 33 C 0 s otoGar3.GL873575 10983321 275 - 12073884 GGTCCTCAGGGTACAAGCCAGCTCAACCCAAAGTGTCCATGAGCAGTTAT--AATCTCTGTAGAGCGCTGATGCCTGGATAATGTCACCATTTC-------------------TGAAACCA-------------------CAGCAGCAATTGTATATTCTATGAGAGATTTTACGTTCACTTCAAAG-AGTCTCTAAAA-----AGTCTAAGAAGTCCTCAAACACCTGTATAGGCACTTAC-ATGGGATGATGCTGTCAC--AACACCTTGACGTTCCTGTTCAGT--TTAATTTATTTTGTGTTTATCATCAAACTGTTG-------------GCAA i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56214856 282 + 122678785 GGTTCATGGAGCACAGCTCAGCTCATCCTCAAGGCTGACGGTGGTGCCATTCCATCTATATG-----CTGATTCCC----AAAGTCTACATTTCTCAAACAAAGAGCCAAGAATATTGCCT-------------------CAGGGGTGATCACCTATTTTATAAGAATTTTTAAGTTGACTTCCAAG-ATTATTTAATGAAATTAGTCTAA-AAATTCTGAAACACCTATGTGACCAC--------------TTGTATCACTTAATGCCATGGCATCATTGATCAGTTTGCATCGCTTCTTGTATTTGTCATCAGATTGATG-------------GCAA i canFam3.chr1 I 7 I 982 s dasNov3.JH569188 638388 281 + 760995 -ACTCATGGAGGAGAGCTCAGCTCATCCTAAATGCTAAGGTTATC----T--AGCCCCTGTAGA-TAGTGACTTCTAGATAAAGTCACAGTTTC-------------------TTAAACTGAGCTCCACAAGTATCGTCTCAGTGATTGTCAAGGGTTATATAAGAATTTTTAAGTTTACTTAAAAACATAATGTAATA--ATTAGTATAAGAAATTTGAAAACATCTAGATATCTACTTGTCTCCAAGT-------------AACCTCAGGGCGTCATTGTTCAGTTTGCTCTTCTTTTTGCATTTGTCATCAAATTATGa-------------a--- i dasNov3.JH569188 C 0 C 0 a score=56219.000000 s hg38.chr6_KB021644v2_alt 153480 4 + 185823 GTGA s panTro5.chr6 173610246 4 + 175400573 GTGA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171843540 4 + 173848474 GTGA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11526644 4 - 12463322 GTGA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156359453 4 + 157873769 GTGA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170386920 4 + 172585720 GTGA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169130210 4 - 170955103 GTGA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8416942 4 + 10161646 GTGA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1447302 4 + 3144229 GTGA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96732897 4 + 98384682 GTGA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8279370 4 - 10857215 GTGA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15658867 4 - 23502949 GTGA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169940343 4 + 171630274 GTGA i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1340865 4 - 2905041 GTGA i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1304894 4 - 2164891 GTGA i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1549729 4 - 1813869 GTGA i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10983596 4 - 12073884 GTGA i otoGar3.GL873575 C 0 I 437 s dasNov3.JH569188 638669 4 + 760995 gtaa i dasNov3.JH569188 C 0 C 0 e canFam3.chr1 56215138 982 + 122678785 I a score=4640.000000 s hg38.chr6_KB021644v2_alt 153484 1 + 185823 -G s panTro5.chr6 173610250 1 + 175400573 -G i panTro5.chr6 C 0 C 0 s panPan2.chr6 171843544 1 + 173848474 -G i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11526648 1 - 12463322 -G i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156359457 1 + 157873769 -G i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170386924 1 + 172585720 -G i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169130214 1 - 170955103 -G i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8416946 1 + 10161646 -G i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1447306 1 + 3144229 -G i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96732901 1 + 98384682 -G i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8279374 1 - 10857215 -G i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15658871 1 - 23502949 -G i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169940347 1 + 171630274 -G i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1340869 1 - 2905041 -G i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1304898 1 - 2164891 -G i cebCap1.NW_016107695v1 C 0 I 2946 s aotNan1.NW_018494782v1 1549733 1 - 1813869 -G i aotNan1.NW_018494782v1 C 0 C 0 s dasNov3.JH569188 638673 1 + 760995 t- i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10983600 437 - 12073884 I e canFam3.chr1 56215138 982 + 122678785 I a score=-1143.000000 s hg38.chr6_KB021644v2_alt 153485 1 + 185823 -G s panTro5.chr6 173610251 1 + 175400573 -G i panTro5.chr6 C 0 C 0 s panPan2.chr6 171843545 1 + 173848474 -G i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11526649 1 - 12463322 -G i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156359458 1 + 157873769 -G i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170386925 1 + 172585720 -G i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169130215 1 - 170955103 -G i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8416947 1 + 10161646 -G i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1447307 1 + 3144229 -G i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96732902 1 + 98384682 -G i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8279375 1 - 10857215 -G i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15658872 1 - 23502949 -G i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169940348 1 + 171630274 -A i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1340870 1 - 2905041 -A i saiBol1.JH378287 C 0 C 0 s aotNan1.NW_018494782v1 1549734 1 - 1813869 -A i aotNan1.NW_018494782v1 C 0 C 0 s dasNov3.JH569188 638674 1 + 760995 c- i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10983600 437 - 12073884 I e cebCap1.NW_016107695v1 1304899 2946 - 2164891 I e canFam3.chr1 56215138 982 + 122678785 I a score=47949.000000 s hg38.chr6_KB021644v2_alt 153486 5 + 185823 TGACT s panTro5.chr6 173610252 5 + 175400573 TGACT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171843546 5 + 173848474 TGACT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11526650 5 - 12463322 CGACT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156359459 5 + 157873769 CGACT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170386926 5 + 172585720 CGACT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169130216 5 - 170955103 CGACT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8416948 5 + 10161646 CGACT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1447308 5 + 3144229 CGACT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96732903 5 + 98384682 CGACT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8279376 5 - 10857215 CGACT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15658873 5 - 23502949 CGACT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169940349 5 + 171630274 CAACT i calJac3.chr4 C 0 I 2184 s saiBol1.JH378287 1340871 5 - 2905041 CGACT i saiBol1.JH378287 C 0 I 1772 s aotNan1.NW_018494782v1 1549735 5 - 1813869 TGACT i aotNan1.NW_018494782v1 C 0 I 3375 s canFam3.chr1 56216120 5 + 122678785 TGACA i canFam3.chr1 I 982 C 0 s dasNov3.JH569188 638675 5 + 760995 ttact i dasNov3.JH569188 C 0 I 1135 e otoGar3.GL873575 10983600 437 - 12073884 I e cebCap1.NW_016107695v1 1304899 2946 - 2164891 I a score=26527.000000 s hg38.chr6_KB021644v2_alt 153491 3 + 185823 TTT- s panTro5.chr6 173610257 3 + 175400573 TTT- i panTro5.chr6 C 0 C 0 s panPan2.chr6 171843551 3 + 173848474 TTT- i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11526655 3 - 12463322 TTT- i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156359464 3 + 157873769 TTT- i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170386931 3 + 172585720 TTT- i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169130221 3 - 170955103 TTT- i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8416953 3 + 10161646 TTT- i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1447313 3 + 3144229 TTT- i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96732908 3 + 98384682 TTT- i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8279381 3 - 10857215 TTT- i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15658878 3 - 23502949 TTT- i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169942538 3 + 171630274 TTT- i calJac3.chr4 I 2184 C 0 s saiBol1.JH378287 1342648 3 - 2905041 TTT- i saiBol1.JH378287 I 1772 C 0 s aotNan1.NW_018494782v1 1553115 3 - 1813869 TTT- i aotNan1.NW_018494782v1 I 3375 C 0 s canFam3.chr1 56216125 2 + 122678785 -TT- i canFam3.chr1 C 0 I 2 s dasNov3.JH569188 639815 3 + 760995 -TTA i dasNov3.JH569188 I 1135 C 0 e otoGar3.GL873575 10983600 437 - 12073884 I e cebCap1.NW_016107695v1 1304899 2946 - 2164891 I a score=40095.000000 s hg38.chr6_KB021644v2_alt 153494 7 + 185823 AAAAAAC s panTro5.chr6 173610260 7 + 175400573 AAAAAAC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171843554 7 + 173848474 AAAAAAC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11526658 7 - 12463322 AAAAAAC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156359467 7 + 157873769 AAAAAAC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170386934 7 + 172585720 AAAACAT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169130224 7 - 170955103 AAAACAT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8416956 7 + 10161646 AAAACAT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1447316 7 + 3144229 AAAACAT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96732911 7 + 98384682 AAAACAT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8279384 7 - 10857215 AAAACAT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15658881 5 - 23502949 AAAAC-- i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169942541 7 + 171630274 AAAAAGG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1342651 7 - 2905041 AAAAAGG i saiBol1.JH378287 C 0 C 0 s aotNan1.NW_018494782v1 1553118 7 - 1813869 AAAAAGG i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10984037 7 - 12073884 AGAAAGG i otoGar3.GL873575 I 437 C 0 s canFam3.chr1 56216129 6 + 122678785 AAAAAA- i canFam3.chr1 I 2 I 1 s dasNov3.JH569188 639818 7 + 760995 AAAAAAT i dasNov3.JH569188 C 0 C 0 e cebCap1.NW_016107695v1 1304899 2946 - 2164891 I a score=5608040.000000 s hg38.chr6_KB021644v2_alt 153501 507 + 185823 -AATTACAAAGC--TTTT----TCCCCCAATTTTCAAATCTAGCTAGATGAATTTAGTTTGTATTTTTAAA-TGTT-----AAAAAGCAAGTTCAGATCAGTTCATCCATTTCTTCAAACCATGACTGTAAAGAAAACCGGCAGAAATTAAGCCACAGAAATGTGTTAAAGTACATTGCAGATGGGACTTGAACCCAC-AGTCCAGGAAACTTGGGTTTGAGG-TAAAACCTCGTCTT-AG---CA-----TA---TCTTGTACCTTGCTCTCATGCTGTATCTACTTTCATTTGCGTGTTCAAATTACA-GTG-TTCTAGTACACTCTGAAAGTGTTAATTTTCATGCTACAGTG----GTTGC--TTTCC---ACACAGCGACCTGAGGTTTTGGTTGAGTA-CAGTTAACGTGGTTGTAAAAACGTCTGATTAAACTCTCCTGACAACCGAC---CTTGCAACAAAAGTCATACAAAG----ACAGTGTGTTTTCAGCTTTTACGCTGTGTAAACTTA-----CAAGTGA-GACCTTTTC--TGAAACTA-TTTTTTTT s panTro5.chr6 173610267 508 + 175400573 -AATTACAAAGC--TTTT----TCCCCCAATTTTCAAATCTAGCTAGATGAACTTAGTTTGTATTTTTAAA-TGTT-----AAAAAGCAAGTTCAGATCAGTTCATCCATTTCTTCAAACCATGACTGTAAAGAAAACCAGCAGAAATTAAGCCACAGAAATGTGTTAAAGTACATTGCAGATGGGACTTGAACCCAC-AGTCCAGGAAACTTGGGTTTGAGGCTAAAACCTCGTCTT-AG---CA-----TA---TCTTGTACCTTGCTCTCATGCTGTATCTACTTTCATTTGCGTGTTCAAATTACA-GTG-TTCTAGTACACTCTGAAAGTGTTAATTTTCATGCTACAGTG----GTTGC--TTTCC---ACACAGCGACCTGAGGTTTTGGTTGAGGA-CAGTTAATGTGGTTGTAAAAACGTCTGATTAAACTCTCCTGACAACCGAC---CTTGCAACAAAAGTCATACAAAG----ACAGTGTGTTTTCAGCTTTTATGCTGTGTAAACTTA-----CAAGTGA-GACCTTTAC--TGAAACTA-TTTTTTTT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171843561 508 + 173848474 -AATTACAAAGC--TTTT----TCCCCCAATTTTCAAATCTAGCTAGATGAATTTAGTTTGTATTTTTAAA-TGTT-----AAAAAGCAAGTTCAGATCAGTTCATCCATTTCTTCAAACCATGACTGTAAAGAAAACCAGCAGAAATTAAGCCACAGAAATGTGTTAAAGTACATTGCAGATGGGACTTGAACCCAC-AGTCCAGGAAACTTGGGTTTGAGGCTAAAACCTCGTCTT-AG---CA-----TA---TCTTGTACCTTGCTCTCATGCTGTATCTACTTTCATTTGCGTGTTCAAATTACA-GTG-TTCTAGTACACTCTGAAAGTGTTAATTTTCATGCTACAGTG----GTTGC--TTTCC---ACACAGCGACCTGAGGTTTTGGTTGAGGA-CAGTTAACGTGGTTGTAAAAACATCTGATTAAACTCTCCTGACAACCGAC---CTTGCAACAAAAGTCATACAAAG----ACAGTGTGTTTTCAGCTTTTATGCTGTGTAAACTTA-----CAAGTGA-GACCTTTTC--TGAAACTA-TTTTTTTT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11526665 508 - 12463322 -AATTATAAAGC--TTTT----TCCCCCAATTTTCAAATCTAGCTAGATGAATTTAGTTTGTATTTTTAAA-TGTT-----AAAAAGCAAGTTCAGATCAGTTCATCCATTTCTTCAAACCATGACTGTAAAGAAAACCGGCAGAAATTAAGCCACAGAAATGTGTTAAAGTACATTGCAGATGGGACTTGAACCCAC-AGTCCAGGAAACTTGGGTTTGAGGCTAAAACCTCGTCTT-AG---CA-----TA---TCTTGTACCTTGCTCTCATGCTGTATCTACTTTCATTTGCGTGTTCAAATTGCA-GTG-TTCTAGTACACTCTGAAAGTGTTAATTTGCATGCTACAGTG----GTTGC--TTTCC---ACACAGCGACCTGAGGTTTTGGTTGAGTA-CAGTTAACGTGGTTGTAAAAATGTCTGATTAAACTCTCCTGACAACCGAA---CTTGAAACAAAAGTCATACAAAG----ACAGTGTGTTTTCAGCTTTTACGCTATGTAAACTTA-----CAAGTGA-GACCTTTTC--TGAAACTA-TTTTTTTT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156359474 502 + 157873769 -AATTATAAAGCTTTTTT----TTCCCCAATTTTCAAATCTAGCTAGATGAA-TTATTTTGTATTTTTAAA-TGTT-----AAAAAGCAAGTTCAGATCAGTTCATCCATTTCTTCAAACCATGACTGTAAAGAAAACTGGCAGAAATTAAGCCACAGAAATATATTAAAGTACATTGCAGATGTGACTTGAACCCAC-AGTCCAGGAAACTTGGGTTTGAGGCTAAAACCTCGTCTT-AG---CA-----TA---TCTTGTACCTTGCTCTCACGCTGTATCTACTTTCATTTGCGTGTTCAAATTACA-GCG-TTCTAGTACATTCTGAAAGTGTTAATTTTCATGCTACGGTG----GTGGT--TTTCC---ACACAGCGACCTGAGGTTTTGGGTGAGTA-CAGTTAACGTGGTTGTAAAAACATCTGATTAAACTCTCCTGAC----------CTTGAAACAAAAGTCAGACAAAC----ACAATGTGTTTTCAGCTTTTACACTGTGTAAACTTA-----CAAGTGA-GACCTTTTT--TGAAACTA-TTTTTTTA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170386941 509 + 172585720 -AATTATAAAGC-TTTTT----CCCCCCAATTTTCAAATCTAGCTAGACGAATTTAGTCTGTATTTTTAAA-TGTT----GAAAAAGCAAGTTCAGATCAGTTCATCCATTTCTTCAAACCATAACTGTAAAGAAAACCAGCAGAAATTAAGCCACAGAAATATGTTAAAGCACATTGCAGATGTGACTTGAACCCAC-AGTCCAGGAAACTTGGGTTTGAGGCTAAAACCTCCTCTT-AG---CA-----TA---TCTTGTACCTTGCTCTCATGCTG-ATCTACTTTCATTTGAGTGTTCAAATTACA-GCG-TTCTAGTACATTCTGAAAGTGTTAATTTTCATGCTACAGTG----GTTGT--TTTCC---ACACAGCGAACTGAGGTTTTGGTTGAGTA-CAGTTAACGTGGTTGTAGAAAAGTCTGATTAAACTCTCATGACTACTGAC---CTTGAAACAAAAGTCATACAAAG----ACCGTGCGCCTTCAGCTTTCACGCTGTGTAAACTTA-----CAAGTCA-GACCTGTTT--TGAAACTT-TTTTTTTA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169130231 509 - 170955103 -AATTATAAAGC-TTTTT----CCCCCCAATTTTCAAATCTAGCTAGACGAATTTAGTCTGTATTTTTAAA-TGTT----GAAAAAGCAAGTTCAGATCAGTTCATCCATTTCTTCAAACCATAACTGTAAAGAAAACCAGCAGAAATTAAGCCACAGAAATATGTTAAAGCACATTGCAGTTGTGACTTGAACCCAC-AGTCCAGGAAACTTGGGTTTGAGGCTAAAACCTCCTCTT-AG---CA-----TA---TCTTGTACCTTGCTCTCATGCTG-ATCTACTTTCATTTGAGTGTTCAAATTACA-GTG-TTCTAGTACATTCTGAAAGTGTTAATTTTCATGCTACAGTG----GTTGT--TTTCC---ACACAGCGAACTGAGGTTTTGGTTGAGTA-CAGTTAACGTGGTTGTAGCAAAGTCTGATTAAACTCTCATGACTACTGAC---CTTGAAACAAAAGTCATACAAAG----ACCGTGCGTCTTCAGCTTTCACGCTGTGTAAACTTA-----CAAGTCA-GACCTGTTT--TGAAACTT-TTTTTTTA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8416963 509 + 10161646 -AATTATAAAGC-TTTTT----CCCCCCAATTTTCAAAGCTAGCTAGATGAATTTAGTCTGTATTTTTAAA-TGTT----GAAAAAGCAAGTTCAGATCAGTTCATCCATTTCTTCAAACCATAACTGTAAAGAAAACCAGCAGAAATTAAGCCACAGAAATATGTTAAAGCACATTGCAGATGTGACTTGAACCCAC-AGTCCAGGAAACTTGGGTTTGAGGCTAAAACCTCCTCTT-AG---CA-----TA---TCTCGTACCTTGCTCTCATGCTG-ATCTACTTTCATTTGAGTGTTCAAATTACA-GCG-TTCTAGTACATTCTGAAAGTGTTAATTTTCATGCTACAGTG----GTTGT--TTTCC---ACACAGCGAACTGAGGTTTTGGTTGAGTA-CAGTTAACGTGGTTGTAGAAAAGTCTGATTAAACTCTCATGAGTACTGAC---CTTGAAACAAAAGTCATACAAAG----ACCATGCGTCTTCAGCTTTCACGCTGTGTAAACTTA-----CAAGTCA-GACCTGTTT--TGAAACTT-TTTTTTTA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1447323 509 + 3144229 -AATTATAAAGCTTTTTT----TCCCCCAATTTTCAAATCTAGCTAGACGAATTTAGTCTGTATTTTTAAC-TGTT----GAAAAAGCAAGTTCAGATCAGTTCATCCATTTCTTCAAACCATAACTGTAAAGAAAACCAGCAGAAATTAAGCCACAGAAATATGTTAAAGCACATTGCAGATGTGACTTGAACCCAC-AGTCCAGGAAACTTGGGTTTGAGGCTAAAACCTCCTCTT-AG---CA-----TA---TCTTGTACCTTGCTCTCATGCTG-ATCTACTTTCATTTGAGTGTTCAAATTACA-GCG-TTCTAGTACATTCTGAAAGTGTTAATTTTCATGCTACAGTG----GTTGT--TTTCC---ACACAGCGACCTGAGGTTTTGGTTGAGTA-CAGTTAACGTGGTTGTAGAAAAGTCTGATTAAACTCTCATGACTACTGAC---CTTGAAACAAAAGTCATACAAAG----ACCGTGCGTCTTCAGCTTTCACGCGGTGTAAACTTA-----CAAGTCA-GACCTGTTT--TGAAAC-T-TGTTTTTA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96732918 507 + 98384682 -AATTATAAGGC-TTTTT----TCCCCCAATTTTCAAATCTAGCTAGACGAATTTAGTCTGTATTTTTAAA-TGTT----GAAAAAGCAAGTTCAAATCAGTTCATCCATTTCTTCAAACTGTGACTGTAAAGAAAACCAACAGAAAATAAGCCACAGAAATATGTTAAAGTACATTGCAGATGTGACTTGAACCCAC-AGTCCAGGAAACTTGGGTTTGAGGCTAAAACCTCCTCTT-AG---CA-----TA---TCTTGTACCTTGCTCTCATGCGGTATCTACTTTCATTTGAGTGTTCAAATTACA-GCG-TTCTGGTACATTCTG--AGTGTTAATTTTCATGCTACAGTG----GTTGC--TTTCC---ACACAGCAGCCTGAGGTTTCGGTTGAGTA-CAGTTAACGTGGTTGTAGAAAAGTCTGATTAAACTCTCATGACTACTGAC---CTTGAAACAAAAGTCATACAAAG----ACCGTGCGTCTTCAGCTTTCACGCTGTGTGAACTTA-----CAAGTCA-GACCTGTTT--TGAAAC-T-TTTTTTTA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8279391 509 - 10857215 -AATTATAAAGC-TTTTT----TCCCCCAATTTTCAAATCTAGCTAGACGAATTTAGTCTGTATTTTTAAA-TGTT----GAAAAAGCAAGTTCAGATCAGTTCATCCATTTCTTCAAACCATAACTGTAAAGAAAACCAGCAGAAATTAAGCCACAGAAATATGTTAAAGTACATTGCAGATGTGACTTGAACCCAC-AGTCCAGGAAACTGGGGTTTGAGGCTAAAACCTCCTCTT-AG---CA-----TA---TCTTGTACCTTGCTCTCATGCTGTATCTACTTTCATTTGAGTGTTCAAATTACA-GCG-TTCTAGTACATTCTGAAAGTGTTAATTTTCATGCTACAGTG----GTTGT--TTTCC---ACACAACAACCTGAGGTTTTGGTTGAGTA-CAGTTAACGTGGTTGTAGAAAAGTCTGATTAAACTCTCATGACTACTGAC---CTTGAAACAAAAGTCATACAAAG----ACCGTGCGTCTTCAGCTTTCACGCTGTGTAAACTTA-----CAAGTCA-GACCTGTTT--TGAAAC-T-TGTTTTTA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15658886 507 - 23502949 -AATTATAAAGC-TTTTT----TTCCCCAATTTTCAAATCTAGCTAGACGAATTTATTTTGTACTTTTAAA-TGTT----AAAAAAGCAAGTTCAGATCAGTTCATCCATTTCTTCAAACCATGACTGTAAAGAAAACCAGCAGAAATTAAGCCACAGAAATATGTTAAAGTACACTGCAGATGTGACTTGAACCCAC-AGTCCAGGAAACTTGGGTTTGAGGCTAAAACCTCCTCTT-AG---CA-----TA---TCTTGTACCTTGCTCTCATGCTGTATCTACTTTCATTTGAGTGTTCAAATTACA-GTG-TTCTGGTACATTCTG--AGTGTTAATTTTCATGCTACAGTG----GTTGT--TTTCC---ACACAGCGACCTGAGGTTTTGGTTGAGTA-CAGTTAACGTGGTTGTAGAAGAGTCTGATTAAACTCTCATGACTATTGAC---CTTGAAACAAAAGTCATACAAAG----ACAGCGTGTCTTCAGCTTTCACGCTGTGTAAACTTA-----CAAGTCA-GACCTGTTT--TGAAAC-A-TTTTTTTA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169942548 481 + 171630274 -AATTACAAAGC-TCTTT----TCCCCCAATTTTCAAATCTGGCTAGATGAATTTAGTTTGTATTTTTAAA-TGTT----AAAAAAGCAGGTTCAGATCAGTTCATCCATTTCTTCAAACCATGACTCTGAAGAAAA---------------CCACAGAAATATGTTAAAGCGCATTGCAGATGTGACTTGAGGCCAC-AGACCAGGAAACTTGGATTTGAGGCTGAAACCTCCTCCG-AG---CA-----TA---TCTTGTACCTTGCTCTCGGGCTACATCCACTTTCATTTG-GTGTT-AAATTACA-CTG-TTCTAGTACATTTTTAAAGTGTTAATTTTAATGCTACAGCA----GTTGT--TTTCC---ACACAGCGACCTAAGGTTTTGGTTGA--A-TCGTTAATGTGGTTGTACAGAAGTCTGATTAAACCCTCCTGAC-------------GAAGCAA---TCATACACAGATCGACAGTGTGCTTTCAGCTTTCACGCTGGGTCAGCTTA-----CCAGTGA-GACCTTGTT--TGAAACCA--TTTTTTT i calJac3.chr4 C 0 I 1 s saiBol1.JH378287 1342658 500 - 2905041 -AATTACAAAGC-TCTTT----TCCCCCAATTTTCAAATCTAGCTAGATGAATTTAGTTTGTATTTTTAAA-TGTT-----AAAAAGCAAGTTCAGATCAGTTCGTCCGTTTCTTCAAACCATGACTGTAAAGAAAACCAatggaaattaagccacaaaaatatgttaaagtacattgcagatgtgacttgagcccac-agaccaggaaacttggatttgaggctgaaacctcctcTG-AG---CG-----TA---TCTTGTACCTTCCTCTCAGGCTACATCTACTTTCATCTG-GTGTT-AAATTACA-CCG-TTCCAGTACATTTTGAAAGTGTTAATTTTAATGCTACAGTG----GTTGT--TTTCC---ACACAGTGACCTAAGGTTTTGGTTGA--A-TAGTTAATGTGGTTGTAAAAAAGTCTGATTAAACTCTCCTGAC-----------TTGAAGCAA--GTCATACAAAGATCGACAGTGTGCTTTCGGCTTTCACGCTGTGTCAACTTA-----CCAGTGA-GACCTTTTT--TGAAACTATTTTTTTTT i saiBol1.JH378287 C 0 I 1 s cebCap1.NW_016107695v1 1307845 499 - 2164891 -AATTACAAAGC-TCTTT----TCCCCCAATTTTCAAATCTAGCTAGATGAATTTAGTTTGTATTTTTAAA-TGTT----AAAAAAGCAAGTTCAGATCAGTTCATCCATTTCTTCAAACCATGACTGTAAAGAAAACCAATGGAAATTAAGCCACAGAAATCTGTTAAAGTACATTGCAGATGTGAC-TGAGCCCGC-AGACCAGGAAACTTGGATTGGAAGTTGAAACCTCCTCTG-AG---CA-----TG---TCTTGTACCTTGCTCTCAGGCTACATCTACTTTCATCTG-GTGTT-AAATTACA-CCG-TTCCAGTACATTTTGAAAGTGTTAATTTTAATGCTACAGTG----ATTGT--TTTCC---ACACAGCGACCTAAGGTTTTGGCTGA--A-TAGTTAATGTGGTTGTAAAAAAATCTGATTAAACTCTCCTGAC-----------TTGAAGCAA--GTCATACAAAGATCAACAGTGTGCTTTCAGCTTTCACGCTCTGTCAACTTA-----CCAATGA-GACATTTTT--TGAAACTA-TATTTTTT i cebCap1.NW_016107695v1 I 2946 I 1 s aotNan1.NW_018494782v1 1553125 496 - 1813869 -AATTACAAAGC-TCTTT----TCCCCCAATTTTCAAATCTAGCTAGATGAATTTAGTTTGTATTTTTAAA-TGTT----AAAAAAGCAAGTTCAGATCAGTTCATCCATTTCTTCAAACCATGACTGTAAAGAAAACCAACGGAAATGAAGCcacagaactatgttaaaggacattgcagatgtgacttgag-ccac-agaccaggaaacttggatttgaggctgaaacctcctccG-AG---CA-----TG---T-TTGTACCTTGCTCTCAGGCCACATCTACTTTCACTTG-GTGTT-AAGTTACA-CCG-CTCCAGTACGTTTTGAAAGTGTTAATTTTAATGCTACAGTG----GTTGT--TTTCC---ACACAGCGACCTAAGGTTTTGGGTGA--A-TAGTTAACGTGGTTGTAAAAAA-TCTGATTAAACTGTCCTGAC-----------TTGAAGCAA--GTCATACAAAGATCGACAGTGTGC-TTCAGCTTTCACGCTGCGTCAACTTA-----CCAGTGA-GACCTTTTT--TGAAACTA-TTTTTTTT i aotNan1.NW_018494782v1 C 0 I 15 s otoGar3.GL873575 10984044 520 - 12073884 -AATTAGAAAGCATTTCT----TTTTCCAGTTTTCAAATGTAGCTGGAAGATTTTGATACACATCTTTAAA-TGTT----AAAAAAGCAAGTTCAGATCAGTTCATCCATTTCTTCAAAACA-GACTGTAAAGAAAACTGAAGGAAattaaaccacagaagtatgttaaagtacattgcagatgtgattggaacccac-aggccaggaaacttggatgggaggctaaaaccccatcct-tggcaca-----cg---tcctgtgcctCACCCCTATGCTGTATTTTCTTTCATTTGCATGTCTAAATTATATCTG-TTCTAATCCG-TGTAAAAGTGTTGATTCTAGTGCTATGCTG----GTGGT--TTTTCTCAGCACAACCATCCAGGTGTTTGCTTGAGTACCAGTTAACATGG-TGGAAAGATGTTTTATTAATCTTTCTTGACTACTGAC-TTTTTTTAACAAAAATTACACAAACATTGAAGGAACGTGTTCAGCTTTCACATCATGTAAAATTA-----CAAACAA-GAAATTTTT----AAACTA-GTTTTTAA i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56216136 524 + 122678785 -AGTTATAAAGCCTATTT----TTTTCTGACTTTCAAATGTAGCTGGAAAATTTTGGAACCCTTCTTTAAACTGTTCAAAAAAAAAGCAAGTTCAGATCAGTTCATCCACTTCTTCAAAACAGGATTATAAAGCAAACCAAAGGAAATTAAACCACAGAAATGTGTTAAAGTGCACTGCAGATGTGACTGGAACCCAC-GGGCGTGGAAGCTTGGATTGGGGGTTGAAACCCCATCCTCAG---CACCAGGCA---TCTTGAACGTGACCCTGAGACCCTATC-GCTTGCTCTTT-GCGTTTAAATTACA-TCGATTCCAGCACTTCTGTGAACGGTTAACTTTAATGATACGGTG----GTTGTGCTTTCA---GCAGAGCCATCGAGGTTTTTGGTTGAACA-TGGTTAATATGGTTGTAAAGA-GTTTTATTAACCTCTTTTGACGACTGGC-TTATTTGAACGAAAGTTAGATAAGT----ACAGACTGTGTTCAGCTGTCACACTAAGTAAACTCT-----CAAGTGAGGACATTTTC--CGGaattt-ttttttt- i canFam3.chr1 I 1 C 0 s dasNov3.JH569188 639825 539 + 760995 AAATTATAAAGC-TTCCCCACACCCCCCAATTTTCAAATATTGCTGGAAGATTTTTGCTCTCGCCTTTAAA-TGTT----AAAAAAGCAAGCTGAGATCAATTCATGCATTTCTTCAAAACATGACTATAAAGGAAACTAAAGGAAATTAAACCACAGGAATATGTTAAAGTACATCACAGATGTGACTTGAACCCACAAGGCTAGGAAAGTTGGATTTTAGGTTGAAAATCCGTTTTTAG---CA-----TACCCTCTCATACCTTACGCCCAGGCTATATCTCCTTCTGTTTGAGTCTTTACATTAAATCCA-TTCCAATATTTTTTTAAACTGTTAATTTTAATGTTACAGAGTTTTGTTTT--TCTTA---ACCGAGCCATCTAGGTTTTTCGTGGAACA-CAATTAACATGAATTTTAAAAAGTTTTATCAACCTCTCTTGACTACAGAATTTTTAAGAGCAAAAATTATATAAGCATAGACTGTCTGTATTTAGCTCTTCCACTATGTAAACTCAGCAGGCAAGTGA-GAAATTCTTATTGAAATCA-TTCTGAAA i dasNov3.JH569188 C 0 C 0 a score=165670.000000 s hg38.chr6_KB021644v2_alt 154008 31 + 185823 GATTAACAAATG------T-TTTGAA--AAAGAGTTTTTA s panTro5.chr6 173610775 31 + 175400573 GATTAACAAATG------T-TTTGAA--AAAGAGTTTTTA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171844069 31 + 173848474 GATTAACAAATG------T-TTTGAA--AAAGAGTTTTTA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11527173 31 - 12463322 GATTAACAAATG------T-TTTGAA--AAAGAGTTTTTA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156359976 31 + 157873769 AATTAACAAATG------T-TTTGAA--AAAGAGTTTTTA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170387450 31 + 172585720 AATTAACAAATG------T-TTTGAA--AAAGAGTTTTTA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169130740 31 - 170955103 AATTAACAAATG------T-TTTGAA--AAAGAGTTTTTA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8417472 31 + 10161646 AATTAACAAATG------T-TTTGAA--AAAGAGTTTTTA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1447832 31 + 3144229 AATTAACAAATG------T-TTTGAA--AAAGAGTTTTTA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96733425 31 + 98384682 AATTAACAAATG------T-TTTGAA--AAAGAGTTTTTA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8279900 31 - 10857215 AATTAACAAATG------T-TTTGAA--AAAGAGTTTTTA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15659393 31 - 23502949 AATTAACAAATG------T-TTTGAA--AAAGAGTTTTTA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169943030 13 + 171630274 AATTAAGAACTT------T--------------------- i calJac3.chr4 I 1 C 0 s saiBol1.JH378287 1343159 13 - 2905041 AATTAAGAACTT------T--------------------- i saiBol1.JH378287 I 1 C 0 s cebCap1.NW_016107695v1 1308345 13 - 2164891 AATTAAGAACTT------T--------------------- i cebCap1.NW_016107695v1 I 1 C 0 s otoGar3.GL873575 10984564 30 - 12073884 -ATTAAAAAAAA------CATTTGAA--GTAGAGTTTTA- i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56216660 34 + 122678785 aattaaaaagtaatttttt-tttaaattaaaaaGT----- i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 640364 29 + 760995 AATTAAAAAA--------A-TGTGAA--GTATAATTTTTA i dasNov3.JH569188 C 0 C 0 e aotNan1.NW_018494782v1 1553621 15 - 1813869 I a score=2153632.000000 s hg38.chr6_KB021644v2_alt 154039 196 + 185823 GAAACTTCATAAAATTAATCTTCTAGAAACCATAAGGC-ATTTTTGTTTACTTGAGAAGACCAGAGGTTGATGGTGCAGGTCCCTCCAGTGGCCCGAGGATCTCAGTGTTCTGGGCTATTGACTCTGCACTTTCCCTCGCCTTACCCTGTTGG---TGGCAAGACAGCTGCTGGAGCACCAGGCGTCAAGTCCTTCTGCC s panTro5.chr6 173610806 196 + 175400573 GAAACTTCATAAAATTAATCTTCTAGAAACCATAAGGC-ATTTTTGTTTACTTGAGAAGACCAGAGGTTGATGGTTCAGGTCCCTCCAGTGGCCCGAGGATCTCAGTGTTCTGGGCTATTGACTCTGCACTTTCCCTCGCCTTACCCCGTTGG---TGGCAAGACAGCTGCTGGAGCACCAGGCGTCAAGTCCTTCTGCC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171844100 196 + 173848474 GAAACTTCATAAAATTAATCTTCTAGAAACCATAAGGC-ATTTTTGTTTACTTGAGAAGACCAGAGGTTGATGGTTCAGGTCCCTCCAGTGGCCCGAGGATCTCAGTGTTCTGGGCTATTGACTCTGCACTTTCCCTCGCCTTACCCCGTTGG---TGGCAAGACAGCTGCTGGAGCACCAGGCGTCAAGTCCTTCTGCC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11527204 196 - 12463322 GAAACTTCATAAAATTAATCTTCTAGAAACCATAAGGC-ATTTTTGTTTACTTGAGAAGACCAGAGGTTGATGGTGCAGGTCCCTCCAGTGGCCCGAGGATCTCAGTGTTCTGGGCTATTGACTCTGCACTTTCCCTGGCCTTACCCCGTTGG---TGGAAAGACAGCTGCTGGAGCACCAGGCGTCAAGTCCTTCTGCC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156360007 196 + 157873769 GAAACTTCATAAAATTAATCTTCTAGAAACCATAAGGC-TTTTTTGTTTACTTGAGAAGACCAGAGGTTGATGGTGCAGGTCCCTCCAGTGGCCCGAGGATCTCAGCGTTCTGGGCTATTGACTCTGCTCTTTCCCTGGCCTTACCCAGTCAG---TGGCAAGACAGCTGCTGGAACACCAGGTGTCAAGTCCTTCTGCG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170387481 196 + 172585720 GAAACTTCATAAAATTAATCTTCTGGAAACCATAAGGC-TTTTTTGATTTCTTGAGAAGACCAGAGGTTGATGGTGCAGGTTCCTCCAGTGGCCGGAGGATCTCAGCGTTCTGGGCTATTGACTCTGCACTTTCCCTGGCCTTACCCTGTCGG---TGGCAAAGCAGCTGCTGGAGCACCAGGCGTCAAGTCCTTCTGCC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169130771 196 - 170955103 GAAACTTCATAAAATTAATCTTCTGGAAACCATAAGGC-TTTTTTGATTTCTTGAGAAGACCAGAGGTTGATGGTGCGGGTTCCTCCAGTGGCCGGAGGATCTCAGCGTTCTGGGCTATTGACTCTGCACTTTCCCTGGCCTTACCCTGTCGG---TGGCAAAGCAGCTGCTGGAGCACCAGGCGTCAAGTCCTTCTGCC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8417503 196 + 10161646 GAAACTTCATAAAATTAATCTTCTGGAAACCATAAGGC-TTTTTTGATTTCTTGAGAAGACCAGAGGTTGACGGTGCGGGTTCCTCCAGTGGCCGGAGGATCTCAGCGTTCTGGGCTATTGACTCTGCACTTTCCCTGGCCTTACCCTGTCGG---TGGCAAAGCAGCTGCTGGAGCACCAGGCGTCAAGTCCTTCTGCC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1447863 196 + 3144229 GAAACTTCATAAAATTAATCTTCTGGAAACCATAAGGC-TTTTTTGATTTCTTGAGAAGACCAGAGGTTGATGGTGCAGGTTCCTCCAGTGGCCGGAGGATCTCAGCGTTCTGGGCTATTGACTCTGCACTTTCCCTGGCCTTACCCCGTCGG---TGGCAAAACAGTTGCTGGAGCACCAGGCGTCAAGTCCTTCCGCC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96733456 197 + 98384682 GAAACTTCATAAAATTAATCTTCTGGAAACCATAAGGCTTTTTTTGATTTCTTGAGAAGACCAGAGGGTGATGGTGCGGGTTCCTCCAGTGGCCGGAGGATCTCAGCGTTATGGGCTATTGTCTCTGCACTTTCTCTGGCCTTAGCCCGTCGG---TGGCAAAACAGCTGCTGGAGCACCAGGCATCAAGTCCTTCCACC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8279931 197 - 10857215 GAAACTTCATAAAATTAATCTTCTGGAAACCATAAGGCTTTTTTTGATTTCTTGAGAAGACCAGAGGTTGATGGTGCAGGTTCCTCCAGTGGCCTGAGGATCTCAGCGTTCTGGGCTATTGACTCTGCACTTTCCCTGGCCTTACCCCGTCGG---TGGCAAAGCAGCTGCTGGAGCACCAGGCGTCAAGTCCTTCCGCC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15659424 196 - 23502949 GACACTTCATCAAATTAATCTTCTGGAAACCGTAAGGC-TTTTTTGATTTCTTGAGAAGACCAGAGGTTGATGGTGCCTGTTCCTCCAGTGGCCGGAGGATCTCAGCGTTCTGGGCTATTGACTCTGCACGTTCCCTGGCCTTACCCCGTCGG---TGGCAAAACAGCTGCTGGAGCACCAGGCATCAAGTCCTTCTGCC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169943043 193 + 171630274 GAAATGTCATAAAATTAA---TCTAGGAACCATAAGGCTTTTCTCGTTTTCTTGAGAAAACCACAGGTTGATGGTGCAGGTCCCGCCGGTGGCCCGAGGATCTCAACGTTCTGGGCTGTCGACTCTGCCCTTTCCCTGGCCTCACCCAGTCAG---TGGCAGCACAGCTGC-TGAGCACCAGGCGTCGAGTCCTTCTGCC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1343172 186 - 2905041 GAAACGTCATTAAAGTAA---TCTAGGAACTATAAGGCTTTTCTCGTTTTCTTGAGAAGACCAGAGGTTGATGGTGCAGGTCCCGCTGGTGGCCCGAGGATCTCAGCCTTCTGGGCTA--------ACCCTTTCCCAGGCCTCACCCAGTCGG---TGGCAGCACAGCCGCGGGAGCTCCAGGCATCAAGTCCTTCCGCC i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1308358 194 - 2164891 GAAACATCATAAAATTAA---TCTAGGAACCATAAGGCTTTTCTCGTTTTCTTGAGGAGACCAGAGGTTGATGGTGCAGGTCCCACCGGTGGTCCGAGGATCTCAGCGTTCTGAGCTATTGACTCTGCCCCTTCCCTGGCCTCACCCAGTGGA---TGGCAGCACGGCTGCGGGAGCACCAGGCATCAAGTCCTTCTGCC i cebCap1.NW_016107695v1 C 0 I 22 s aotNan1.NW_018494782v1 1553636 193 - 1813869 GAAATGTCTTAAAATTAA---TCTAGGAACCATAAGGCTTTTCTCGTTTTCTTGAGAAGACCAGAGGTTGATGGTGCAGGTCCCGCCGGTGGCCCGAGGAGCTCAGCGTTCTGGGCTATTGACTCTGCCCTTTCCCCGGCCTCACCCGGTCGG---TGGCAGCACAGCTGCTGGAGCACCAGGCATCAAGTCCTTCTGC- i aotNan1.NW_018494782v1 I 15 C 0 s otoGar3.GL873575 10984594 196 - 12073884 GAAACTTCATAAAAATAATCTTTTATAAATCACCAGGCATATTTTATTTACTCAAGAAGACCAGAGGTTAGTGGTGCAGGTCCCTTCACTGGCCCAAGGACATCAAGGTTCCTGGCTGATGACTCTACAGTCTCCATGGCCTC-CCCCAAGAG---CTGCAAGACAGCGGCCAGAACACCAGGCCCAAAGGCCTTATGCC i otoGar3.GL873575 C 0 I 1 s canFam3.chr1 56216694 190 + 122678785 AATACTTCATGAAAATGATCTTTTTTAAATCAAAAGGCATTTTTTATTTACTC---AAGACTGAAGACTGGGGACCCGGGTCCCCTCGGTGGCCCTGTGGCGGCCCAGTTCTGGGCTA--GCCACTGCAGTTTCTGTGGCCTTACCCCAACGG----GTAGAGACAGCGGCCAGACCA-GAGGCACCAAGCCCTCACGGC i canFam3.chr1 C 0 I 2 s dasNov3.JH569188 640393 200 + 760995 CAGAATTCATGAAAATAATCATTAAAAAAAAATAAGGCATTTATTATTTTCTCAAGACAACCAGAGGTTAGTGGTCCAGGTTCTTTCTATGGCCCAACAATGTCACATTTCTGGGCCAGTGCTTTTGCAGTTTCCTTGACCTTACCCCAATTAGTATAGCAAGATGGCAGCCAGAAATGTGGGCATCAAGTTCTCATGCC i dasNov3.JH569188 C 0 C 0 a score=124658.000000 s hg38.chr6_KB021644v2_alt 154235 15 + 185823 -TGCACTCT-G-GCAGAA s panTro5.chr6 173611002 15 + 175400573 -TGCACCCT-G-GCAGAA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171844296 15 + 173848474 -TGCACCCT-G-GCAGAA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11527400 15 - 12463322 -TGCACCCT-G-GCAGAA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156360203 15 + 157873769 -TGCACCCT-G-GCAGGA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170387677 15 + 172585720 -TGCACCCT-G-GCAGAA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169130967 15 - 170955103 -TGCACCCT-G-GCAGAA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8417699 15 + 10161646 -TGCACCCT-G-GCAGAA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1448059 15 + 3144229 -TGCACCCT-G-GCAGCA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96733653 15 + 98384682 -TGCACCCT-G-GCAGAA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8280128 15 - 10857215 -TGCACCCT-G-GCAGAA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15659620 15 - 23502949 -TGCACCCT-G-GCGGAA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169943236 13 + 171630274 --ACACCCT-G--AAGAA i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1343358 14 - 2905041 --GCGCCCT-G-CCAGAA i saiBol1.JH378287 C 0 C 0 s aotNan1.NW_018494782v1 1553829 15 - 1813869 -TGCGCCCT-G-GCAGAA i aotNan1.NW_018494782v1 C 0 I 8 s otoGar3.GL873575 10984791 16 - 12073884 -TAAACCCT-GAGCAGAG i otoGar3.GL873575 I 1 C 0 s canFam3.chr1 56216886 15 + 122678785 -TAGCTCTA-G-GCAGGA i canFam3.chr1 I 2 C 0 s dasNov3.JH569188 640593 17 + 760995 ATAAACCCCAG-GCAGGA i dasNov3.JH569188 C 0 C 0 e cebCap1.NW_016107695v1 1308552 22 - 2164891 I a score=28295.000000 s hg38.chr6_KB021644v2_alt 154250 5 + 185823 AAGAC s panTro5.chr6 173611017 5 + 175400573 AAGAC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171844311 5 + 173848474 AAGAC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11527415 5 - 12463322 AAGAC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156360218 5 + 157873769 AAGAC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170387692 5 + 172585720 AAGAC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169130982 5 - 170955103 AAGAC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8417714 5 + 10161646 AAGAC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1448074 5 + 3144229 AAGAC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96733668 5 + 98384682 AAGAC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8280143 5 - 10857215 AAGAC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15659635 5 - 23502949 AAGAC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169943249 3 + 171630274 --GAC i calJac3.chr4 C 0 I 5 s saiBol1.JH378287 1343372 3 - 2905041 --GAG i saiBol1.JH378287 C 0 I 2 s otoGar3.GL873575 10984807 5 - 12073884 AAGGG i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56216901 3 + 122678785 -GGG- i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 640610 5 + 760995 AATAA i dasNov3.JH569188 C 0 C 0 e aotNan1.NW_018494782v1 1553844 8 - 1813869 I e cebCap1.NW_016107695v1 1308552 22 - 2164891 I a score=6392.000000 s hg38.chr6_KB021644v2_alt 154255 1 + 185823 A s panTro5.chr6 173611022 1 + 175400573 A i panTro5.chr6 C 0 C 0 s panPan2.chr6 171844316 1 + 173848474 A i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11527420 1 - 12463322 A i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156360223 1 + 157873769 A i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170387697 1 + 172585720 A i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169130987 1 - 170955103 A i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8417719 1 + 10161646 A i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1448079 1 + 3144229 A i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96733673 1 + 98384682 A i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8280148 1 - 10857215 A i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15659640 1 - 23502949 A i colAng1.NW_012114488v1 C 0 C 0 s saiBol1.JH378287 1343377 1 - 2905041 A i saiBol1.JH378287 I 2 I 2 s otoGar3.GL873575 10984812 1 - 12073884 G i otoGar3.GL873575 C 0 C 0 s dasNov3.JH569188 640615 1 + 760995 G i dasNov3.JH569188 C 0 C 0 e aotNan1.NW_018494782v1 1553844 8 - 1813869 I e cebCap1.NW_016107695v1 1308552 22 - 2164891 I e calJac3.chr4 169943252 5 + 171630274 I e canFam3.chr1 56216904 0 + 122678785 C a score=987205.000000 s hg38.chr6_KB021644v2_alt 154256 156 + 185823 AGTCAGA--GGAAGACATA------T----TTCCCACAGAATTA-------AAATG----ACATGGCAGAAGATCTTTCCCGTAAGCCC--AGTAATGAGCCTGGCCTCCGCCCTTCACCCGGTGCTCCGTATTTT--GAGTCTACTT-GTAATCAGATTTGGAGCTTCCGAGGGCTGCAGATT s panTro5.chr6 173611023 156 + 175400573 AGTCAGA--GGAAGACATA------T----TTCCCACAGAATTA-------AAATG----ACATGGCAGAAGATCTTTCCCGTAAGCCC--AGTAATGAGCCTGGCCTCTGCCCTTCACCCGGTGCTCCGTATTTT--GAGTctactt-gtaatcagatttggagcttccgagggctgcagatt i panTro5.chr6 C 0 C 0 s panPan2.chr6 171844317 156 + 173848474 AGTCAGA--GGAAGACATA------T----TTCCCACAGAATTA-------AAATG----ACATGGCAGAAGATCTTTCCCGTAAGCCC--AGTAATGAGCCTGGCCTCTGCCCTTCACCCGGTGCTCCGTATTTT--GAGTCTACTT-GTAATcagatttggagcttccgagggctgcagatt i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11527421 156 - 12463322 AGTCAGA--GGAAGACATA------T----TTCCCACAGAATTA-------AAATG----ACATGGCAGAAGATCTTTCCCGTAAGCCC--AGTAATGAGCCTGGCCTCCGCCCTTCACCCGGTGCTCCGTATTTT--GAGTCTACTT-GTAATCAGATTTGGAGCTTCCGAGGGCTGCAGATT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156360224 156 + 157873769 AGTCAGA--GGAAGACGCA------T----TTCCCACAGAATTA-------AAATG----ACATGGCAGACAATCTTTCCTGTAAGCCC--AGTAATGAGCCTGGCCTCCACCCCTCACCCGGTGCTCTGTATTTT--CATTCTCCTT-GTAATTggatctggagcttccaagggctgcaggtt i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170387698 157 + 172585720 AGTCAGA--GGAAGACACA------T----TTCCCACAGAATTA-------AAATG----ACATGGCAGAAGATCTTTCCAGTAAGCCC--AGTAATGAGCCTGGCCTCCACCC-TCGTCCGGTGCTCCGTATTTTCAGAGTCTCCTT-GTAATCGGATCTGAAGCTTCCGAGGGCTGCAGATT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169130988 157 - 170955103 AGTCAGA--GGAAGACACA------T----TTCCCACAGAATTA-------AAATG----ACATGGCAGAAGATCTTTCCAGTAAGCCC--AGTAATGAGCCTGGCCTCCACCC-TCGTCCGGTGCTCCGTATTTTCAGAGTCTCCTT-GTAATCGGATCTGAAGCTTCCGAGGGCTGCAGATT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8417720 157 + 10161646 AGTCAGA--GGAAGACACA------T----TTCCCATAGAATTA-------AAATG----ACATGGCAGAAGATCTTTCCAGTAAGCCC--AGTTATGAGCCTGGCCTCCACCC-TCGTCCGGTGCTCCGTATTTTCAGAGTCTCCCT-GTAATCGGATCTGAAGCTTCCGAGGGCTGCAGATT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1448080 158 + 3144229 AGTCAGA--GGAAGACACA------T----TTCCCACAGAATTA-------AAATG----ACATGGCAGAAGATCTTTCCCGTAAGCCC--AGTAGCGAGCCTGGCCTCCACCCTTCGTCCGGTGCTCCGTATTTTGAGAGTCTCCTT-GTAATCGGATCTGGAGCTTCCGAGGGCTGCAGATT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96733674 158 + 98384682 AGTCAGA--GGAAGACACA------T----TTCCCACAGAATTA-------AAATG----ACACGGCAGAAGATCTTTCCCGTAAGCCC--AGTAACGAGCCTGGCCTCCACCCTCCGCCCGGTGCTCCGTATTTTCAGAGTCTCCTT-GTAATCGGATGTGGAGCTTCCGAGGGCTGCAGATT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8280149 158 - 10857215 AGTCAGA--GGAAGACACA------T----TTCCCACAGAATTA-------AAATG----ACATGGCAGAAGATCTTTCCAGTAAGCCC--AGTAGCGAGCCTGGCCTCCACCCTTCGCCCGGTGCTCCGTATTTTCAGAGTCTCCTT-ATAATcggatctggagcttccgagggctgcagatt i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15659641 158 - 23502949 AGTCAGA--GGAAGACACA------T----TTCCCACAGAATTA-------AAATG----ACATGGCAGAAGATCTTTCCCGTAAGCCC--AGTAATGAGCCTGGCCTCCACCCTTCGCCCGGTGCTCCGTATTTTCAGGGTCTCCTT-GTAATCGGATCTGGAGCTTCCGAGGGCTGCAGATT i colAng1.NW_012114488v1 C 0 C 0 s otoGar3.GL873575 10984813 141 - 12073884 AATTAGAGTGGAAAACAGA------T---CTTCCCACAGAATTG-------AAAAT----ACCTGGCAGAAAACCTTTCCCGTGAGCCAGGAGCAAGGAGCCTGGCTCACATCCTTCAGCTGGAGTTCAGCATGTT-----------------------TTGGGTCTTAGCAGAACAGTGCATT i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56216904 160 + 122678785 CGGCAGC--GGAAAACAGA------TCTCCTTCCCACAATATTA-------AAAAAAAATACATGGCAGAA-AGCTTTCCCCTAGCCAC-GAGCCATGAGTCTGGCCTCAGCTCTTCACACG----TGTGCAATTC---CGTCTACTTAGGAATCCAGACTGAGGGCTTAGGGGGCAGCCAGCT i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 640616 165 + 760995 AGCTGGA--GAGAAAAAGAAATCTCT----TTCCCTTGGCATTATTTTTTTAAATT------ATGGAATAAAATCTTTCCCGTAAGCCATTAGCGATAAGCCTAGCTTTAGTCCTTTATTCAGTTTTCAATGTTTTCAGGCccttctt-acaa------atccagcttaacagggcagcaaatt i dasNov3.JH569188 C 0 C 0 e saiBol1.JH378287 1343378 2 - 2905041 I e aotNan1.NW_018494782v1 1553844 8 - 1813869 I e cebCap1.NW_016107695v1 1308552 22 - 2164891 I e calJac3.chr4 169943252 5 + 171630274 I a score=1210032.000000 s hg38.chr6_KB021644v2_alt 154412 104 + 185823 CAGCCTCAACTCCCTGCTCTCAGATTCTCTTTGATCCCAGCTTCATGAGAATGTTTGTTTTATTTTTGAATGTA-CTATGATTTGA----ATAGCTCACTTTCTttctt s panTro5.chr6 173611179 104 + 175400573 cagcctcaactccctgctctcagattctgtttgatcccagcttcatgagaatgtttgttttatttttgaATGTA-CTATGATTTGA----ATAGCTCACTTTCTttctt i panTro5.chr6 C 0 C 0 s panPan2.chr6 171844473 104 + 173848474 cagcctcaactccctgctctcagattctgtttgatcccagcttcatgagaatgtttgttttatttttgaATGTA-CTATGATTTGA----ATAGCTCACTTTCTttctt i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11527577 104 - 12463322 CAGCCTCAACTCCCTGCTCTCAGATTCTCTTTGATCCCAGCTTCATGAGAATGTTTGTTTTATTTTTGAATGTA-CTATGATTTGA----ATAGCTCACTTTCTttctt i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156360380 104 + 157873769 cagcctcaactccctgctctaagattctctttgttcccagcttcatgagaatgtttgttttatttttgaATGTA-CTATGATTTTA----ATAGCTCACTTTCTttctt i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170387855 104 + 172585720 CAGCCTCAACTCCCTGCTCTCAGATTCTCTTTGATCCCAGCTTCGTGAGAATGCTTGTTTTATTTTTGAATGTA-CTACCATTTTA----GTAGCTCACTTTCTttctt i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169131145 104 - 170955103 CAGCCTCAACTCCCTGCTCTCAGATTCTCTTTGATCCCAGCTTCGTGAGAATGCTTGTTTTATTTTTGAATGTA-CTACCATTTTA----GTAGCTCACTTTCTttctt i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8417877 104 + 10161646 CAGCCTCAACTCCCTGCTCTCAGATTCTCTTTGATCCCAGCTTCGTGAGAATGCTTGTTTTATTTTTGAATGTA-CTACCATTTTA----GTAGCTCACTTTCTttctt i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1448238 104 + 3144229 CAGCCTCAACTCCCTGCTCTCAGATTCTCTTTGATCCCAGCTTCATGAGAATGCTTGTTTTATTTTTGAATGTA-CTACGATTTTA----GTAGCTCACTTTCTttctt i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96733832 104 + 98384682 CAGCCTCAACTCCCTGCTCTCAGATTCTCTTTGATCCCAGCTTCATGAGAATGCTTGTTTTACTTTTGAATGTA-CTACGATTTTA----GTAGCTCACTTTCTttctt i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8280307 104 - 10857215 cagcctcaactccctgctttcagattctctttgatcccagcttcacgagaatgcttgttttatttttgaATGTA-CTACCACTTTA----GTAGCTCACTTTCTttctt i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15659799 103 - 23502949 -AGCCTCAACTCCCTGCTCTCAGATTCTCTTTGATCGCAGCTTCATGAGAATGCTTGTTTTATTTTTGAATGCA-CTACGATTTTA----GTAGCTCACTTTCTttctt i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169943257 104 + 171630274 CAGCCTCAACTCCCTGCTCTCGGATTCTCTTTGATCCCAACTTCATGGGAATGCTTGTTTTACTTTGGAATTTA-CTGTGATTTTA----ATAGCTCACTCTCATTCTT i calJac3.chr4 I 5 C 0 s saiBol1.JH378287 1343380 104 - 2905041 CAGCCTCAACTCCCTGCTCTCGGATTCTCTTTGATCCCAACTTCATGGGAATGCTTGTTTTATTTTGGAATTTG-CTATGATTTTA----ATAGCTCACTTTCATTCTT i saiBol1.JH378287 I 2 C 0 s cebCap1.NW_016107695v1 1308574 104 - 2164891 CAGCCTCAACTCCCTGCTCTCAGACTCTCTTTGATCCCAACTTCATAGGAATGCTTGTTGTATTTTGGAACTTA-CTATGATTTTA----ATAGCTCACTTTCATTCTT i cebCap1.NW_016107695v1 I 22 C 0 s aotNan1.NW_018494782v1 1553852 104 - 1813869 CAGCCTCAACTCCCTGCTCTCGGATTCTCTTTGATCCCAACTTCATGGGAATGCTTGTTTTATTTTGGAATTTA-CTATGATTTTA----ATAGCTCACTTTCATTCTT i aotNan1.NW_018494782v1 I 8 C 0 s otoGar3.GL873575 10984954 97 - 12073884 CAAGCTCTACTCCCTGCTCTAAGATTCTCTATTGTCCTAGGTTAACGGCATTGTCTAACTTATTTCTGAATTTG-CCGTGATTTTA-----------ACTTTCTTTTTT i otoGar3.GL873575 C 0 I 577 s canFam3.chr1 56217064 107 + 122678785 CAGCTCCAACGCCCTGCTGTGAGAGTCCCTCC-ATCTCAGGGTCACGCGAGCGTCCATCCCATCTGTTAATTTAGCTGTGGTTTTTAAT-ATGGCTCACtttatttttt i canFam3.chr1 C 0 I 5 s dasNov3.JH569188 640781 107 + 760995 cagcctcaactccctgctttgtgactct-tccaatttgtgcttaa-gggaatgtttaccttactttagaaattagttatggttttAAATAATAACTCACTTTCTTTTGT i dasNov3.JH569188 C 0 I 1 a score=4860964.000000 s hg38.chr6_KB021644v2_alt 154516 544 + 185823 aac--atttttaatatcgtgaaatataacat-------aaaaataggcacaaggcaaaaacatgctcctcaattgttt-atcaagaaatgtgaccacacccaggtcagtacacagaacggccagaactcccaaaggcc----tgcgctt---------tgtatgccc--------------ttccctgcgttgcaaAGTTCACTATGCTACGGGCTGCAGTGC-AATCACAGCTTCGCCTTTCTG--CAGAGGCTTAGCTCAACA-------TCA-------CTAAGTACAA-----CGgtgttgcctt-ccttttgaatgttacagacatgtaacatcatgcagtctacagtcctttgcagtctctcgg----ttttacttgtgaggttcagctgctgctacctgtagccatggttcctttggtgtcactgctgtacaccgtcttat-tctgccgcatcaatgtaccgaagttcatgtatctattctctggttgagaaaaaagtaggtttgtacag-----------ttaatactaataacatggctctgaataatcgtatgt--gtctctccatgcccataaacataaa--ttcccattca----ggagtggaactgctagg---acc-c s panTro5.chr6 173611283 544 + 175400573 aac--atttttaatatcgtgaaatataacat-------aaaaataggcacaaggcaaaaacatgctcctcaattgttt-atcaagaaatgtgaccacacccaggtcagtacacagaacagccagaactcccaaaggcc----tgcgctt---------tgtatgccc--------------ttccctgcgttgcaaagttcactatgctacgggctgcagtgc-aatcacagcttcgcctttctg--cagaggcttagctcaaca-------tca-------ctaagtacaa-----cggtgttgcctt-ccttttgaatgttacagacatgtaacgtcatgcagtctacagtcctttgcagtctcttgg----ttttacttgtgaggttcacctgctgctacctgtagccatggttcctttggtgtcactgctgtacactgtcttat-tctgccgcatcaatgtaccaaagttcatgtatctattctctggttgagaaaaaagtaggtttgtacag-----------ttaatactaataacatggctctgaataatcgtatgt--gtctctccatgcccataaacataaa--ttcccattca----ggagtggaactgctagg---acc-c i panTro5.chr6 C 0 C 0 s panPan2.chr6 171844577 544 + 173848474 aac--atttttaatatcgtgaaatataacat-------aaaaataggcacaaggcaaaaacatgctcctcaattgttt-atcaagaaatgtgaccacacccaggtcagtacacagaacagccagaactcccaaaggcc----tgcgctt---------tgtatgccc--------------ttccctgcgttgcaaagttcactatgctacgggctgcagtgc-aatcacagcttcgcctttctg--cagaggcttagctcaaca-------tca-------ctaagtacaa-----cggtgttgcctt-ccttttgaatgttacagacatgtaacgtcatgcagtctacagtcctttgcagtctcttgg----ttttacttgtgaggttcacctgctgctacctgtagccatggttcctttggtgtcactgctgtacactgtcttat-tctgccgcatcaatgtaccaaagttcatgtatctattctctggttgagaaaaaagtaggtttgtacag-----------ttaatactaataacatggctctgaataatcgtatgt--gtctctccatgcccataaacataaa--ttcccattca----ggagtggaactgctagg---acc-c i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11527681 543 - 12463322 aac--atttttaatatcgtgaaatataacat-------aaaaataggcacaaggcaaaaacatgctcctcaattgttt-atcaagaaatgtgaccacacccaggtcagtacacagaacggccaggactcccaaaggcc----tgcgctt---------tgtatgctc--------------ttccctgcgttgcaaagttcgctatgctacgggctgcagtgc-aatcacagcttcgcctttctg--cagaggcttaactcaaca-------tca-------ctaagtacaa-----cggtgttgcctt-ccttttgaatgttacagacaggtaacatcatgcagtctacagtcctttgcattctgtcgg----ttttacttgtgaggttcacctgccgctacctgtagccatggttcctttggtgtcattgctgtacaccgtcttat-tctgccacatcaatgtaccgaagttcatatatctattctctggttgagaaaaaagtaggtttgtacag-----------ttaatactaataacatggctc-gaataatagtatgt--gtctctccatgcccataaacataaa--ttcccattca----ggagtggaactgctagg---atc-c i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156360484 543 + 157873769 aacatatttttaatattgtgaaatataacat-------aaaaataggcacaaggcaaaaagatgcccttcaatagttt-atcaagaaatgtgaccacacccaggtcagtacacagaacggccaggactcccgaaggcc----tgtgctt---------tgtatgccc--------------tt-cctgcgttgcaaagttcactatgctacgggctgcagtgc-aaccacagcttcgcctttctg--cagaggcttaactcaaca-------tca-------ctaagtacag-----tggtgttgcctt-ccttttgaatgttacagacatgtaacgtcctgcagtctacagtcctttgcattctctcgg----ttttacttgtgaggttcacctgctgctacctgtagccatggctcctttggtgtcactgctgtacactgtcttat-tctgtcgcatcaatgtaccgaagttcatgtatctattctctagttgagaaaaaagtaggtttgtacag-----------ttaatactaataacacggctctgaataatcg--tgt--gtctctctatgcccaaaagcataaa--ttccccttca----ggagtggaactgctagg---acc-c i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170387959 544 + 172585720 aacatatttttaatattgtgaaatataacat------aaaaaataggcataaggcaataacgttctcctcaattgtttaatcaagaaatgtgaccacacccaggtcagtgcacagaatggccaggactctagaagacc----tgcactt---------tgtatgccc--------------ttccccgcgttgcaaagttcactatgctacgggctgcagggc-aatcacagctttgcctttctg--cagaggcttaactcatca-------tca-------ctaagtacga-----cggcgttgcctt-ccttgtgaacgttacagacatgc--catcatgcagtc--cagtcctttgcattctctcgg----ttttacttgtgaggttcacctgctgctacctgtagccatggttcctttggtgtcgctgctgtacactgtcttat-tctattgcatccgtgttccgaagtttatatatctattctctggttgagaaaaatgtaggtttgtacag-----------ctaatgctaataacatggctctaaataatcgtgtat--gtctctccatgcccataaacataaa--ttcccattca----ggagtggaactgctaga---acc-c i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169131249 544 - 170955103 aacatatttttaatattgtgaaatataacat------aaaaaataggcataaggcaataacgttctcctcaattgtttaatcaagaaatgtgatcacacccaggtcagtgcacagaatggccaagactctagaagacc----tgcactt---------tgtatgccc--------------ttccccgcgttgcaaagttcactatgctacgggctgcagtgc-aatcacagctttgcctttctg--cagaggcttaactaacca-------tca-------ctaagtacga-----cggcgttgcctt-ccttgtgaacgttacagacatgc--catcatgcagtc--cagtcctttgcattctctcgg----ttttacttgtgaggttcacctgctgctacctgtagccatggttcctttggtgtcgctgctgtacactgtcttat-tctattgcatccgtgttccgaagtttatatatctattctctggttgagaaaaatgtaggtttgtacag-----------ctaatgctaataacatggctctaaataatcgtgtat--gtctctccatgcccataaacataaa--ttcccattca----ggagtggaactgctaga---acc-c i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8417981 544 + 10161646 aacatatttttaatattgtgaaatataacat------aaaaaataggcataaggcaataacgttctcctcaattgtttaatcaagaaatgtgaccacacccaggtcagtgcacagaatggccaagaccccagaagacc----tgcactt---------tgtatgccc--------------ttccccgcgttgcaaagtccactatgctacgggctgcagtgc-aatcacagctttgcctttctg--cagaggcttaactaatca-------tca-------ctaagtacga-----cggcgttgcctt-ccttgtgaacgttacagacatgc--catcatgcagtc--cagtcctttgcattctctcgg----ttttacttgtgaggttcacctgctgctacctgtagccatggttcctttggtgtcgctgctgtacactgtcttat-tctattgcatccgtgttctgaagtttatatatctattctctggttgagaaaaatgtaggtttgtatag-----------ctaatgctaataacatggctctaaataatcgtgtat--gtctctccatgcccataaacataaa--ttcccattca----ggagtggaactgctaga---acc-c i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1448342 544 + 3144229 aacatatttttaatattgtgaaatataacat------aaaaaataggcacaaggcgataacgttctcctcaattgtttaatcaagaaatgtgaccacacccaggtcagtgcacagaatggccaggactccagaaggcc----tgcactt---------tgtatgccc--------------ttcgccgcattgcaaAGTTCACTATGCTACGGGCTGCAGTGC-AATCGCAGCTTTGCCTTTCTG--CAGAGGCTTAACTCATCA-------TCA-------CTGAGTACGA-----CGGCGTTGCCTT-CCTTCTGAACGTTACAGACATGC--CATCATGCAGTC--CAGTCCTTTGCATTCTCTCGG----TTTTACTTGtgaggttcacctgctgctacctgtagccatggttcctttggtgtcgctgctgtacactgtcttat-tctattgcatccgtgttccgaagtttatttatctattctctggttgagaaaaatgtaggtttgtacag-----------ttaatgctaataacatggctctaaataatcgtgtat--gtctctccatgcccataaacataaa--ttcccattca----ggagtggaactgctaga---acc-c i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96733936 544 + 98384682 aacgtatttttaatattgtgaaatataacat------aaaaaataggcacaaggcaaaaacgtgctcctcaactgtttaatcaagaaatgtgaccacacccaggtcagtgcacagaatggccaagactccagaaggcc----tgcactt---------tgtatgccc--------------ttccccgcgttgcaaagttcactatgctacgggctgcagtgc-aatcacagctttgcctttctg--cagaggcttaactcatca-------tca-------ctaagtacga-----cagcgttgcctt-ccttgtgaacgttccagacatgc--cgtcatgcagtc--cagtcctttgcattctctcgg----ttttacttgtgaggttcacctgcgactgcctgtagccgtggttcctttggtgtcgctgctgtacactgtcttat-tctatcgcatccgtgttccgaagtttatatatctattctctggttgaggaaaacgtaggtttgtacag-----------ctaatgctaataacatgggtctaaataatcgtgtgt--gtctctccacgcccatcaacataaa--ttcccattca----ggagtggaactgctaga---acc-c i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8280411 544 - 10857215 aacatatttttaatattgtgaaatataacat------aaaaaataggcacaaggcaataacgtgctcctcaattgcttaatcaagaaatgtgaccacacccaggtcagtgcacagaatggccaggactccagaaggcc----tgcactt---------tgtatgccc--------------ttccccgcgttgcaaagttcactatgctacgggctgcagtgc-aatcacagctttgcctttctg--cagaggcttaactcatca-------tcg-------ctaagtacga-----cggcgttgcctt-ccttgtgaacgttacagacatgc--catcatgcagtc--cagtcctttgcattctctcgg----ttttacttgtgaggttcacctgctgctacctgtagccatggttcctttggtgtcgctgctgtacactgtctgat-tctattgcatccgtgttccgaagtttatatatctattctcgggttgagaaaaatgtaggtttgtacag-----------ctaatgctaataacatggctctaaataatcgtgtat--gtctctccatgcccataaacataaa--ttcccattca----ggagtggaactgctaga---acc-c i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15659902 544 - 23502949 aacgtatttttaatattgtgaaatataacat------aaaaaataggcataaggcaaaaacgtgctcctcaattgtttaatcaagaaatgtgaccacacccaggtcagtgcacagaatggccaggactccagaaggcc----tgcactt---------tgtgtgccc--------------ttccccgcgttgcaaagtttactgtgctacgggctgctgtgc-aatcacagctttgcctttctc--cagaggcttaactcatca-------tca-------ctaagtacaa-----tggcgttgcctt-ccttgtgaacgttacagacatgt--ggtcatacagtc--cagtcctttgcattctctcgg----ttttacttgtgaggttcacctgctgctacctgtagccatggttcctttggtgtcactgctgtacactatcttgt-tctatcgcacccgtgttccaaagtttatatatctattctctggttgagaaaaacgtaggtttgtacag-----------ctaatgctaataacatggctctaaataatcgtgtgt--gtctctccacgcccataaacataaa--ttcccattca----ggagtggaactgctaga---acc-c i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169943361 524 + 171630274 AACACATTTTTGATATTGTGAAATATAACAT-------AAAAGTAGGCACAAGGCAAAAACATGCTCCTCAATTGTCT-ATCAAGAAATATCACAACACCCAGGTCAGTGCCCTGGATGTGCAGGGCTGCAAAAGGCC----TGTGCTT---------GGTACACCT-------------GTTCCCCGGGCTGCAACGCTCACTGCGCTCTGGGC-----TGC-AGTCACA-----------CCG--CAGAGGCTCAACTCACCA-------TCA-------CTCAGGACAG-----CAGCACTGCCCTGCCTGTTGGACGTTACAGACATGC--CATCGTGCAGCCTACAGTC---TGCATTCTCT-GGGATTTAATCCCCGTGACGTTCACCTGCAGCtgcgtgtagccacggtt-ctttcgtgtccctgctgtatgc--tctcgt-tctac----tcagtgtactcaggtt----tgtctattctctggtggagaaaaaagtaagattgtacagtttatgg----ttaataccaataacacggctttgaataatcatgtgt--gtctctctgtgccca-aaacataaa--ttcccattca----ggagcagaattgctagg---acc-- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1343484 515 - 2905041 AACACATTTTTGATATTGTGAAATATAACAT-------AAAAATAGGCACAAGGCAAAAACACACTCCTCAATTGTTT-ATCAAGAAATATCACAACACCCAGGTCAGTGCCCTGAATATCCAGGACTGCAAAAGTCC----TGTGCTT---------GGTACGCCT-------------GTTCCCTGGGTTGCGAAGTTTCCTGTGCTCTGGGCTGCAGTGC-AGTCACA-----------CTG--CAGAGGTTTAACTCACCA-------TCA-------CTAAGTGCAA-----CAGCGTTGCCCTCCCTGTTGAACGTTACAGACATGC--CATCGTGCAGCCTGCAGTC---TGCATTCTCTCGGCATTTGCTCCTTGTGAGGTTCACCTGCTGCTACTTGTAGCCATGGTT-CTTTCGTGTCCCTGCTATACACGGTCTTAT-TCTATTGCATCAGTGTACTCAGGTG----TGTCTATTCTCTGGTTGAGAAAAA--------------------------TTAACACCGATACCATGGCTTTGAATAAttgtgtgt--gtctctctgtgctcatcaacataaa--ttcccattca----ggagcggaattgctagg---acc-- i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1308678 534 - 2164891 AACACATTTTTGATATTGTGAAATATAACAT-------AAAAATAGGCACAAGGCAAAAACATGCTCCTCAATTGTTT-ATCAGGAAATATCACAACACCCAGCTCAGTGCCCCGAATATCCAGGACTGTAAAAGGCC----TGTGCTT---------GGTACGCCT-------------ATTCCCTGGGTTGCAAAGTTCACTGTGCTCTGGGCTGTAGTGC-AATCGCA-----------CCG--CAGAGGTTTAACTCGCCA-------TCA-------CTAAGTACAG-----CAGCGTTGCCCTCCCTGCTGACTGTTCCAGACACGC--CATCATGCAGCCTAAAGTC---TGCATTCTCTCGGCATTTGTTCCTCGTGAGGTTCACCTGCTGCTACTTGTAGCCATGGTT-CTTTCGTGTCCCTGCTGTAGGCTGTCTtat-tctattgcatcagtgtattcacgtt----tgtctattctctggttgagaaaaatgtaggattgtacagtttatga----ttaataccaat---gtggctttgaataattgtgtgt--gtctctctgtcaccaaaaacataaa--ttcccattca----ggagtggaattgctagg---acc-- i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1553956 536 - 1813869 AACACATTTTTGATATTGTGAAATATAACAT-------AAAAATAGGCACAAGGCAAAAACATGCTCCTCAATTGTCT-ATCAAGAAATATCACAACACCCAGGTCAGTGCCCTGAATACCCAGGACTGCAAAAGGCC----TGTGCTT---------GGTACGCCC-------------GTTCCCTGGGTTGCAAAGTTCACTGTGCTCTGGGCTGCAGTGC-AATCACA-----------CCG--CAGAGGTGTAACTCACCC-------TCA-------CTAAGTACAA-----CAGCGTTGCCCT-CCTGTTGAACGTTACAGACATGC--CATCGTGCAGCCTACGGTC---TGCATTCTCCTGGCATTTATTCCCCGTGAGGTTCACCTGCTGCTACCTGTAGCCCTGGTT-CTTTTGTGTCCCTGCTGTACGCTGTCTtac-tctattgcatcagtgtactcaggtt----tgtctattctctggttgagaaaaatgtaggattgtacagttaatgg----ttaataccaatgacgtggctttgagtaatcgtgtgt--gtctctctgtg-ccataaacataaa--ttcccattca----ggaccggaattgctagg---acca- i aotNan1.NW_018494782v1 C 0 I 34 s canFam3.chr1 56217176 543 + 122678785 aat--attCTTAGTattgtgaaatatttttt-------aaaa--agacacaaagcaaaaataaactattcaatgactt-at-ggtctatgtcaccactgccaggtccacacacagggtgaccaggatatcagaagacc----tgc---c---------tgtctgctccaaaccacgatcctgtctctgc-tcacagggttcactacttttctgtctgtaatgctaatcacttatttgcttttctgaaaaaaagtttaccacacaagcatatgtcc-------ctaaacacga-----tagcattgagtg--ctgttgaacttcattgaaacat--gatcatgacgcgtacagtcctttggattctctcaaca--ttctgtccatgagatgcacctgtgactactgggaactgtcatccctttagctttgtttctgtgtaTTGTCCTGT-CCCATAGCA---------------------------TCTCTTGTGGAGGCAATGG--GGGCTGTTCAGAGTTTGGGGATTCAATACCAGTAAC--GGCTGCAAATCACCCTGCAC--CAGGCTCAGCGCTCCTGAGCACAAATCTCCCCCccta----ggtgtgggctcgccgggtgcac--- i canFam3.chr1 I 5 C 0 s dasNov3.JH569188 640889 556 + 760995 AAC--TTttttgatattgtgaaatacaacatgaatatacaaaaaaggcacaaaacaaaaatgtactcctcaattattt-at---------------tatccaggtaact-------atgtccaggatgtacaaccaccttcttgctccttcccaatgatagatgttg--------------tttccttcacttgcaatttagtaactcttctaactataatgttaattgctcctttgcttttttg--aagaggcttaacatgtaa-------gcatgtgaacttaaatgcaataatttagtgttgcctg-attttgtaactttctggaaatgg--aatcatgtagtacacagtcctttgtattccctcaaaa--taatgcttgtgaaattcatctgttactgcttgtaactgtgatccatgttgttttatggctgtgtac------atgtccatcgcttcaataaaacatgattaatttttccattctagtgttgagaaagagtgcacttttttggg-----------ttattattaataaagttgctatgaacaatcttatgcaggtctcccaatgcccataagaatgaa--tttccacctaagatgggaaggaattgctggg---gca-g i dasNov3.JH569188 I 1 C 0 e otoGar3.GL873575 10985051 577 - 12073884 I a score=239449.000000 s hg38.chr6_KB021644v2_alt 155060 34 + 185823 -cggtgtagacacct-tcacctttagtagacattg-c s panTro5.chr6 173611827 34 + 175400573 -cggtgtagacacct-tcacctttagtagacattg-c i panTro5.chr6 C 0 C 0 s panPan2.chr6 171845121 34 + 173848474 -cggtgtagacacct-tcacctttagtagacattg-c i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11528224 34 - 12463322 -cggtgtagacacct-tcacctttagtagacatcg-c i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156361027 34 + 157873769 -cagtgtagacacct-tcacctttagtacacatcg-c i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170388503 35 + 172585720 -aggtgtagacacct-tcacctttagtagatagcacc i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169131793 35 - 170955103 -aggtgtagacacct-tcacctttagtagatatcacc i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8418525 35 + 10161646 -aggtgtagacacct-tcacctttagtagatatcacc i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1448886 35 + 3144229 -aggtgtagacacct-tcacctttagtagatatcacc i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96734480 35 + 98384682 -aggtgtagacacct-tcacctttagtagataccacc i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8280955 35 - 10857215 -aggtgtagacacct-tcacctttagtggatatcacc i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15660446 35 - 23502949 -aggtgtagacacct-tcacctttagtagatatcgcc i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169943885 35 + 171630274 -aggtgtaggtcccg-tcccctttcgtagacatcacc i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1343999 35 - 2905041 -gggtgtagatccca-tccccttttgtagacatcacc i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1309212 35 - 2164891 -aggtgtagatcccg-tcccctttcatagacatcaac i cebCap1.NW_016107695v1 C 0 C 0 s canFam3.chr1 56217719 35 + 122678785 -aggtatgcatgtctgtcaccttcagagatgatctc- i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 641445 25 + 760995 aggatttagatctct-ccaccttcag----------- i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10985051 577 - 12073884 I e aotNan1.NW_018494782v1 1554492 34 - 1813869 I a score=6019493.000000 s hg38.chr6_KB021644v2_alt 155094 628 + 185823 aaaccatttccaaagtggtttcaccaatttatgtcccc-ccggcagtgtgtgaggataattctcatccacatgccctcttgcgaatgcctgggaccaacagt--cttcaacttcaaccattccaggggttgtggaatagcaccttc-ctcttgacttatttttcattccttgataattattgagattgagcatattttcata-------tattagttggccattgg-------atatctgta----------tctcacataattttgttttgaactgattgtttttgttgtgttgatttgcagaagttctttatgtatttttaataagagtccttt----gttaaatgagtctcaaatatttcctttttctcggtggc-ttacctttttactctcttaatgggtcttttg-tgaaaataatttcttaatgtatatgtgaccccattat-aatttttcccccttcttggctggcgctAACTCCAGGATAGGGCTAA----------------CTTACT----GGCTTATACCTGCATttt--cctttcttctagtatacacattcaaggccataaatg-tc-ccttaagcatggctatagttgtattttgtaagtttccatgtggagtattttccttgtcatttacttcatattaatttttag-----tttac-----------atttttaattt------ggcacatgc s panTro5.chr6 173611861 628 + 175400573 aaaccatttccaaagtggtttcaccaatttatgtcccc-ccggcagtgtgtgaggataattctcatccacatgccctcttgcgaatgcctgggaccaacagt--cttcaactttaaccattccaggggttgtggaatagcaccttc-ctcttgacttatttttcattccttgataattattgagattgagcatattttcata-------tattagttggccattgg-------atatctgta----------tctcacataattttgttttgaactgattgcttttgttgtgttgatttgcagaaattctttatgtatttttaataagagtccttt----gttaaatgagtctcaaatatttcctttttctcggtggc-ttacctttttactctcttaatgggtcttttg-tgaaaataatttcttaatgtatatgtgaccccattat-aatttttcccccttcttggctggtgctAACTCCAGGATAGGGCTAA----------------CTTACT----GGCTTATACCTGCATttt--ccgttcttctaatatacacattcaaggccataaatg-tc-ctttaagcatggctatagttgtattttgtaagtttccatgtggagtattttccttgtcatttacttcatattaatttttag-----tttac-----------atttttaattt------ggcacatgc i panTro5.chr6 C 0 C 0 s panPan2.chr6 171845155 628 + 173848474 aaaccatttccaaagtggtttcaccaatttatgtcccc-ccggcagtgtgtgaggataattctcatccacatgccctcttgcgaatgcctgggaccaacagt--cttcaactttaaccattccaggggttgtggaatagcaccttc-ctcttgacttatttttcattccttgataattattgagattgagcatattttcata-------tattagttggccattgg-------atatctgta----------tctcacataattttgttttgaactgattgcttttgttgtgttgatttgcagaaattctttatgtatttttaataagagtccttt----gttaaatgagtctcaaatatttcctttttctcggtggc-ttacctttttactctcttaatgggtcttttg-tgaaaataatttcttaatgtatatgtgaccccattat-aatttttcccccttcttggctggtgctAACTCCAGGATAGGGCTAA----------------CTTACT----GGCTTATACCTGCATttt--ccgttcttctaatatacacattcaaggccataaatg-tc-ctttaagcatggctatagttgtattttgtaagtttccatgtggagtattttccttgtcatttacttcatattaatttttag-----tttac-----------atttttaattt------ggcacatgc i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11528258 627 - 12463322 aaaccatttccaaagtggtttcaccaatttatgt-ccc-ccggcagtgtgtgaggataattctcatccacatgccctcttgcaaatgcctgggaccaacagt--cttcaactttaaccattccaggggttgtggaatagcaccttc-ctcttgacttatttttcattccttgataattattgagactgagcatattttcata-------tattagttggccattgg-------atatctgta----------tctcacataattttgttttgaactgattgcttttgttgtgttgatttgcagaagttctttatgtatttttaataggagtccttt----gttaaatgagtctcaaatatttcctttttctcggtggc-ttacctttttactctcttaatgggtcttttg-tgaaaataatttcttaatgtatatgtgaccccattat-aatttctccCCCTTCTTGGCTGGCGCTAACTCCAGGATAGGGCTAA----------------CTTACT----GGCTTATACCTGCATttt--cctttcttctaatatacacattcaaggccataaatg-tc-ctttaagcatggctatagttgtattttgtaagtttccatgtggagtattttccttgtcatttacttcatattaatttttag-----tttac-----------atttttaattt------ggcacatgc i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156361061 627 + 157873769 aaaccatttccaaagtggtttctccaattgatgtcccc-ccggcagtgtgtgaggatgattctcatccacacgccctcttgcaaatgcctgggaccaacagt--cttcaacttgagccattgcagggattgtggaatagcaccttc-ctgttgacttatttttcattccttgataattattgagattgagcgtattttcata-------tattagttggccattgg-------atatctgta----------tcttacataattttcttttgaactgattgcttttgttgtgttgatttgcagaagttcttcatgtatttttgataagggtccttt----gttaaatgagtctcaaatatttcctttttcttggtggc-ttacctttttactctcttaatgggtcttttg-tgaaaataatttcttaatgtttatgtgaacccgatat-aattttt-ccctttcttggctggtgctAATTCCAGGATAGGGCTAA----------------CTTACT----GGCTTATACCTGCATttt--cctttcttctaatacacacattcgaggccatgaatg-tc-ctttaagcatggctgtaattgtattttgtaagtttccacgtggagtattttccttgttatttactttatattaatttttag-----tttac-----------attttttattt------tgcacatgc i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170388538 615 + 172585720 aaaccatttccaaagtggtttcaccaatttttgtcccc-ccagcagtgtgtgaggataattctcatccacacgccctcttgcgaatgcccgggaccatcagt---------------cgttccgggggttgtggaatagcactttc-ctgttgacttagttttcattccttgagaattattgagattgagcatattttccta-------tatgagttgtccactgg-------atatctgta----------tcttacataattttcttttgaactgattgcttttgctgtgttgatttgcagaagatctttatgtatttttgataagagtccttt----gttaaatgagtctcaaatatttcctttttctcagtggc-ttacctttttactctcttaatgggtcttttg-tgaaaataattttttagtgtatatgtgaccccaatat-aatttttcccccttcttggctggtgctAAGTCCTGGATAGGGTTAA----------------CTTACT----GGCTTATACCTGCATttt--cgtttcttctaatatacacatttaaggccataaatg-tc-ctttaagcatggatggagttgtattttgtaagtttccatgtggagtattttccttgtcatttactttatattactttttag-----tttac-----------attttttattt------ggcacgtgg i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169131828 615 - 170955103 aaaccatttccaaagtggtttcaccaatttttgtcccc-ccagcagtgtgtgaggataattctcatccacacgccctcttgcgaatgcccgggaccatcagt---------------cgttccgggggttgtggaatagcactttc-ctgttgacttagttttcattcctcgagaattattgagattgagcatattttccta-------tatgagttgtccactgg-------atatctgta----------tcttacataattttcttttgaactgattgcttttgctgtgttgatttgcagaagatctttatgtatttttgataagagtccttt----gttaaatgagtctcaaatatttcctttttctcagtggc-ttacctttttactctcttaatgggtcttttg-tgaaaataattttttagtgtatatgtgaccccaatat-aatttttcccccttcttggctggtgctAAGTCCTGGATAGGGTTAA----------------CTTACT----GGCTTATACCTGCAtttt--cgtttcttctaatatacacatttaaggccataaatg-tc-ctttaagcatggatggagttgtattttgtaagtttccatgtggagtattttccttgtcatttactttatattactttttag-----tttac-----------attttttattt------ggcacgtgg i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8418560 615 + 10161646 aaaccatttccaaagtggtttcaccaatttttgtcccc-ccagcagtgtgtgaggataattctcatccacacgccctcttgcgaatgcccgggaccatcagt---------------cgttccgggggttgtggaatagcactttc-ctgttgacttagttttcattccttgagaattattgagattgagcatattttccta-------tatgagttgtccactgg-------atatctgta----------tcttacataattttcttttgaactgattgcttttgctgtgttgatttgcagaagatctttatgtatttttgataagagtccttt----gttaaatgagtctcaaatatttcctttttctcaatggc-ttacctttttactctcttaatgggtcttttg-tgaaaataattttttagtgtatatgtgaccccaatat-aatttttcccccttcttggctggtgctAAGTCCTGGATAGGGTTAA----------------CTTACT----GGCTTATACCTGCATttt--cgtttcttctaatatacacatttaaggccataaatg-tc-ctttaagcatggatggagttgtattttgtaagtttccatgtggagtattttccttgtcatttactttatattactttttag-----tttac-----------attttttattt------ggcacgtgg i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1448921 615 + 3144229 aaaccatttccaaagtggtttcaccaatttttgtcccc-ccagcagtgtatgaggataattctcatccacacgcccgcttgcaaatgcccgggaccatcagt---------------cgttccgggggttgtggaatagcactttc-ctgttgacttagttttcattccttgagaattattgagattgagcatattttccta-------tatgagttgtccactgg-------atatctgta----------tcttacatcattttcttttgaactgattgcttttgctgtgttgatttgcagaagatctttatgtatttttgataagagtccttt----gttaaatgagtctcaaatatttcctttttctcagtggc-ttacctttttactctcttgatgggtcttttg-tgaaaataatttcttagtgtatatgtgaccccaatat-aatttttcccccttcttggctggtgcCAACTCCTGGATAGGGTTAA----------------CTTACT----GGCTTATACCTGCATttt--cgtttcttctaatatacacatttaaggccataaatg-tc-ctttaagcatggatggagttgtattttgtaagtttccatgtggagtattttccttgtcatttactttatattactttttag-----tttac-----------attttttattt------ggcacgtgg i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96734515 615 + 98384682 aaaccattcccaaagtggtttcaccaatttttgtctcc-ccagccgtgtgtgaggataattctcatccacacgccctcttgcgaatgcctgggaccatcagt---------------cgttccggcggttgtggaatagcaccttc-ttgttgacttagttttcattccttgagaattattgagattgagcatattttccta-------tatgagttgtccactgg-------atatctgta----------tcttacgtaattttcttttgaactgattgcttttgctgtgttgatttgcggaagatctttatgtatttttgatgagagtccttt----gttaaatgagtctcaaatatttcctttttctcagtggc-ttacctttttactctcttaatgggtcttttg-tgaaaataatttcttagtgtatatgtgaccccaatat-aatttttcccccttcttggctggtgctAACTCTTGGATAGGGTTAA----------------CTTACT----GGCTTATACCTGCATttt--catttcttctaatatacacattcaaggccataaatg-tc-ctttaagcatggatggagttgcattttgtaagtttccatgtggagcattttccttgtcatttactttatattactttttag-----tttac-----------attttttattt------ggcacgtgg i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8280990 616 - 10857215 aaaccatttccaaagtggtttcaccaatttttgtcccc-ccagtagtatgtgaggataattctcatccacacgcccgcttgcaaatgcccaggaccatcagt---------------cgttccgggggttgtgcaatagcactttc-ctgttgacttagttttcattccttgagaattattgagattgagcatattttccta-------tatgagttgtccactgg-------atatctgta----------tcttacatcattttcttttgaactgattgcttttgctgtgttgatttgcagaagatctttatgtatttttgataagagtccttt----gttaaataagtctcaaatatttcctttttcccagtggctttacctttttaccctcttgatgggtcttttg-tgaaaataatttcttagtgtatatgtgaccccaatat-aatttttcccccttcttggctggtgctAACTCCTGGATAGGGTTAA----------------CTTACT----GGCTTATACCTGCTTttt--cgtttcttctaatatacacatttaaggccataaatg-tc-ctttaagcatggatggagttgtattttgtaagtttccatgtggagtattttccttgtcatttactttatattactttttag-----tttac-----------attttttattt------ggcacgtgg i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15660481 613 - 23502949 aaaccatttccaaagtggtttcaccaatttttgtcccc-ccagcagtgtgagaggataattctcatccacacgccctcttgcgaatgcctgggaccatcagt---------------cattgcaggggttgtggaatagcaccttc-ctgttgacttagttttcattccttgagaattattgagattgagcatattttccta-------tatgagttgtccactgg-------atatccgta----------tcttacataattttctttcgaactgattgcttttgctgtgttgatttgcagaagatctttatgtatttttgat--gagtccttt----gttaaatgagtctcaagtatttcttttttctcagtggc-ttaccttcttactctcttaatgggtcttttg-tgaaaataatttcttagtgtatatgtgacctcaatat-aatttttcccccttcttggctggtgctAACTCCTGGATAGGGTTAA----------------CTTACT----GGCTTATACCTGCATttt--cgtttcttctaatatacacattcaaggccataaatg-tc-ctttaagcatggatgtagttgtattttgtaagtttccatgtggagtattttccttgtcatttactttatattactttttag-----tttac-----------attttttattt------ggcatgtgg i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169943920 633 + 171630274 aaatgagctccaaagtggctgcaccgatgtatgtccccgccagtggtgtataaagacgattctcacccacaggccttcctgagaatgcatggtaccaaccgt--cttcatcttcggccatgccagcggtggtggaatagcaccttc-ctattgacttatttttgattccttgataattactgagattgagcctatttttata-------tatgagttggccattgg-------atatctgca----------tcttacatccttttcttttgtaccaactgctttggttgtgctgatctgcagaagttgtttatgtg-tttggctaagagaccctt----gttacatgagtctcaaatattccctgttcctctgtggc-ttacctttttaccctcttaatcggtcttttg-tgaaagtaatttcttcatGTATATGTGACCTCGATAT-AATTTTTCCCACTTCCTGGCAGGTGCTCATTCCTGGATAGGGTTAG----------------CTCACT----GGCTT-CCTCTGCATttt--ccttccctctaatatacacattgaaggccacacgtg-tc-cttgaagcat--ttgta-ctgtactttgtaagtttccatgtggagtattttccttgttgtgtactttatattaattactag-----tttacattgtgattttattttttactt------gac--gtgc i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1344034 633 - 2905041 aaagcagctccaaagtggctgcaccgatatatgtcccc-ccagtggtgtataaggatgattctcacccacaggccttcctgagaatgcttggtacctaccat--cttcatctttggtcatgccaggggtggtggaataccaccttc-ctgttgacttatttttcattcctctataattactgagattgagcctatttttata-------tgtgagttggccattgg-------atatctgtg----------tcttacataattttcttttgtactgattgcttttgctgtgttgatctgcaaaagttgtttctgtg-ttttgct--gagtccctt----gttacatgagtctcaaatattccctgttcctctatggc-ttacctttttactctcttaattggtcttttg-tgaaaataatttcttaacgtatatgtgacctcaatat-gatttttcccacttcctggctggtgctccttCCTGGATAGGGTTAG----------------CTTGCT----GGCTT-CCTCTGCATttt--cctttcctctaatacacacatccaaggctacacgtg-tc-ctcgaagcat--ttgtagttgtactttgcaagtttccatgtggagtattctccttgttgtttactttatgttaatttctag-----tttacattgtgattttattttttactt------ggcatgtgc i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1309247 633 - 2164891 aaagcagctccaaaatggctgcaccgatatatgttccc-ccagtggtgtataagggtgattcgcacccacaggccttcc-gagaatgcttggtaccaaccgt--cttcatcttcggccatg-caggggtggtggaatagcaccttg-ctgttgacttatttttcattccttgataattactgagattgagcctatttttata-------tatgagttggccattgg-------atatctgtg----------tcttacataattttcttttgtactgattgcttttgttgtgttgatctgcagaatttgtttatgtg-ttttgctaagagtccctt----gttacatgagtctcaaatattccccattcctctgtggc-ttacctttttactctcttaatcggtcttttg-tgaagataatttcttaatgtatatgtgacctcagtat-aagttttcccacttcctggctggtgctCATTCCTGGATAGTGTTAG----------------CTTACT----GGCTT-CCTCTGCATttt--cctttcctctaatatacacattcaaggccacacgtg-tc-cttgaagcat--ttgtagttgtactttgtaagtttccatgtggggtattttccttgttgtttactttatattaatttctag-----tttacattgtgattttattttttactt------gacctgtgc i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1554526 627 - 1813869 aaagcagctccaaagtggctgcaccgatatatgtcccc-ccagtggcgtataaggatgactctcacccacaggccttcctgagaatgcttggtaccaaccgt--cttcatctttggccag--ccggggtggtgg-atagcaccttc-ctgttgactgatttttcattccttgataaataccaagattgagcctgtttttata-------tgtgagttggccactgg-------atatctgcg----------tcttacgtgactttcttttgtactgattgctgttgctgtgttgatctgcagaagttgtttatgtg-ttttgctaagagtccctt----gttacacgagtctcaaatattccctgttcctctgtggc-ttgcctttgtactctcttaatgggtcttttg-tgaaaataatttcttaatgtatatgtgacctcaatat-aatttttcccccttcctggctgatgctCACTCCTGGACAGGGTTAG----------------CTCACT----GGCTT-CCTCTGCATttt--cctgtcctgtaatatacacattcaaggccacacgtg-tc-cttgaagcat--ttgtagttgtactttgtgagtttccatgtggagtattttccttgttg-----tttatattaatttctag-----tttacattgtgattttattttttactt------gacatgtgc i aotNan1.NW_018494782v1 I 34 C 0 s canFam3.chr1 56217754 627 + 122678785 acactatttccagggcggctgcactgacttacct-ccc-ccaccgacatatgagGCCGACTCT-GCCCACGTGCCCTCTCGTGAACGCTCAGTGAGGACGGA---TTCAGATTCAGCCATTCCAGCCGTGGTGGGATTGCATCTAC-TCCTTGA-TCAATTTGCATCCCTCGGCCATTATCGAGATGGAGCAT----------------------CTGGCCACTTGGGGATCCATATTTGTAAGCTTAACTCTCTTACATGAttttctt-------------------agtgttgatatatagatgatcctaatgtagtctgggtaagagttcttt----gttcattcaat---gaatat--ccttcctctctgggcc-ttaccttttctcacttttcatgagtgtcttgatgagcagaagttctt-gtgtatacctagcctgatatc-gtttcttccccttttttggctggtgctAACTTTGAGAAAGAATCAAAtttaacttcttagtctttactgttaggttttcgtctttatttttcctttttttctaatatttacagtaaaggttataaatgagc-ttttaagtatgctgtcggttggattttat--gttttcatgtgcattattttc--tgtcattcattttaTAGt--tttttaaaaacttttat------------ttatttattcatgagagacacac-- i canFam3.chr1 C 0 I 167 s dasNov3.JH569188 641470 628 + 760995 -atctttccacaaagctcttgcaggagtttccatccca-cca---atgtttgagaggggccctggtcttcgttctttcttgctaatccttagtattaacagtgttttaacttttagcagttccattggttgtggcatgtatcgttctctgttgatttcatttgcatttcttgattatcattgaaatgctgcaccttgtcatatgtttcttatgaaatatcc------------atatttgtaagttctagtctgttggataattttcttttatgttgattgccatttttgcattgaaatgtagaaattccccatttgttctggattagagtcttttgtcagttaaatgagcctcaaatatgtctttcttttctgtgat-ttgccttttaat-----------gtctttaa-cgaatagaagttcttagtgtgtatgtagtacaaaaatcaatgttttttttttct-------------cttgtggttagtgttaa----------------c--att----gattttcagtcgattttt--ctttccttctaatatatgcatttaaggctctaaatg-tctctttaagcatggctttcactgcattttat--gttttcatatgcagtattttccttgtcattcactttatatgactttttaa-----cttacattttgatttgatttttaattt------gacacatgc i dasNov3.JH569188 C 0 I 2 e otoGar3.GL873575 10985051 577 - 12073884 I a score=2380840.000000 s hg38.chr6_KB021644v2_alt 155722 226 + 185823 tatttggaagtacattgtttaattttaaaacatatgagtattttctagtcatctttttgttattaatttctggttt-attacactgtggtcagagaatgtgctcggtatgatgccaatactttaaaatgtagcgggattcagagttgggtcaagcttagcaaatgtttcagaagcgcttgTGAGACAACAACAAAAACATCTTCACAAGCAGTGTCTTATTTCA-GTC s panTro5.chr6 173612489 226 + 175400573 tatttggaagtacattgtttaattttaaaacatatgagtattttctagtcatctttttgttattaatttctggttt-attacactgtggtcagagaatgtgctcggtatgatgccaatactttaaaatgtagcgggattcagagttgggtcaagcttagcaaatgtttcagaggcgcttgTGAGACAACAACAAAAACATCTTCACAAGCAGTGTCTTATTTCA-GTC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171845783 226 + 173848474 tatttggaagtacattgtttaattttaaaacatatgagtattttctagtcatctttttgttattaatttctggttt-attacactgtggtcagagaatgtgctcggtatgatgccaatactttaaagtgtagcgggattcagagttgggtcaagcttagcaaatgtttcagaggcgcttgTGAGACAACAACAAAAACATCTTCACAAGCAGTGTCTTATTTCA-GTC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11528885 225 - 12463322 tatttggaagtacactgtttaattttaaaacatatgagtattttctagtcatctttttgttattaatttctggttt-attacac-gtggtcagagaatgtgctcagtatgatgccaatactttaaaatgtagcgggattcagagttgggtcaagcttagcaaatgtttcagaagcgcttgTGAGACGACAACAAAAACATCTTCACAAGCAGTGTCTTATTTCA-GTC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156361688 226 + 157873769 tatttggaagtacattgtttaattttaaaacatatgagtattttctagtcatctttttgttattaatttctggttt-attacactgtggtcagagaatgtgctcggtatgatgccaatactttaaaatgtagtgggattcagagtttggtcaagcttagcaaatgtttcagaagtgcttgtaaGACAACAACAAAAACATCTCCACAAGCAGTGTCTTATTTCG-GTC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170389153 226 + 172585720 tatttggaagtgtattgtttaattttaaaacatatgcgtattttctagtcatctttttgttattaatttctggctt-attacactgtggtcagagaatgtgctcagtatgatgccaatactttaaaatgtagtgggattcagcgtttggtcaagcttagcaaacgtttcagaagtgcttgtaaGACAGCAACAAAAACATCTTCACGAGCAGCATCTTATTTAA-GTC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169132443 226 - 170955103 tatttggaagtgtattgtttaattttaaaacatatgcgtattttctagtcatctttttgttattaatttctggctt-attacactgtggtcagagaatgtgctcagtatgatgccaatactttaaaatgtagtgggattcagcgtttggtcaagcttagcaaacgtttcagaagtgcttgtaaGACAGCAACAAAAACATCTTCACGAGCAGCATCTTATTTAA-GTC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8419175 226 + 10161646 tatttggaagtgtattgtttaattttaaaacatatgcgtattttctagtcatctttttgttattaatctctggctt-attacactgtggtcagagaatgtgctcagtatgatgccaatactttaaaatgtagtgggattcagcgtttggtcaagcttagcaaacgtttcagaagtgcttgtaaGACAGCAACAAAAACATCTTCACGAGCAGCATCTTATTTAA-GTC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1449536 226 + 3144229 tatttggaagtgtattgtttaattttaaaacatatgagtattttgtagtcatctttttgttattaatttctggctt-attacactgtggtcagagaatgtgctcggtatgatgccaatactttaaaatgtagtgggattcagcgtttggtcaagcttagcaaacgtttcagaagtgcttgtaaGACAGCAACAAAAACATCTTCACAAGCAGCATCTTATTTAA-GTC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96735130 226 + 98384682 tatttggaagtgtattgtttaattttaaaacatatgcgtattttctagtcatgtttttgttattaatttctggttt-attacactgtggtcagagaatgtgctcggtatgatgccaatactttaaaatgtagtgggattCAGAGTTTGGTCAAGCTTAGCAAACGTTTCAGAAGTGCTCGTAAGACAGCAACAAAAACATCTTCACAAGCAGCATCTTATTTAA-GTC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8281606 226 - 10857215 tatttggaagtgtattgtttaattttaaaacatatgcgtattttctagtcatctttttgttattaatttctggctt-attacactgtggtcagagaatgtgctcggtatgatgccaatactttaaaatgtagtgggattcagcgtttggtcaagcttagcaaacgtttcagaagtgcttgtaaGACCGCAACAAAAACATCTTCACAAGCAGCATCTTATTTAA-GTC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15661094 226 - 23502949 tatttggaagtgtattgtttaattttaaaacatatgcatattttctagtcatctttttgttattaatttctggttt-attacactgtggtcagagaatgtgctcgttatgatgccaatacattaaaatgtagtgggattcagagtttggtcaagcttagcaaacgtttcagaagtgcttgtaaGACAGCAACAAAAACATCTTCACAAGCAGCATCTTATTTAA-GTC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169944553 224 + 171630274 tatttggaagtacgttgtttaattttaaaacatatgagtattttccagtcaaccttttgttattaatttctgactt-attacactgtggtcagagaatgtgctcgctgtgatgccaatactttaaaatgcagtgggattc--agtttggtaaagcttagaaagtgtttcatatgtgcttgtaagagaaCAGCAAAAACATCTTCACAAGTAGTATCTTATTTGA-GTG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1344667 226 - 2905041 tatttggaagtatgttgtttaattttaaaacatacgagtattttctagtcatccttttgttattaatttctgactt-attacactgtggtcagagaatgtgctcagtgtgatgccaatactttaaaatgcagtgggattcagagtttggtgaagcttagcaaatgtttcatatgtgcttgtaaGACAACAACAAAAACATCTTCACAAGCATTATCTTATTTAA-GTG i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1309880 226 - 2164891 tatttggaagtatgttgtttaattttaaaacatatgagtattttctagtcatccttttgttgttaatttctgactt-attacactgtggtcagagaatgtgctcggtgtgatgccaatactttaaaatgcagtgggattcagagtctggtaaagcttagcaaatgtttcatatgtacttgtaaGACAACAACAAAAACATcttcacaagcattatcttatttaa-gtg i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1555153 226 - 1813869 tatttggaagtatgttgtttaattctaaaacatatgagtattttctagtcatccttttgttattaatttctgactt-attacactgtggtcagagaatgtgctcggtgtgatgccaatactttaaaatgcagtgggattcagggtttggtaaagcttagcaaatgtttcctatgtgcttgtaaGACAGCAGCAAAAACATCTTCACAAGCGGTATCTTATTTCA-GTG i aotNan1.NW_018494782v1 C 0 C 0 s dasNov3.JH569188 642100 224 + 760995 tattaagaagtacatggctgaacttccagatatatgagtatttcctagcaacccttctgttactgatttctgttttaatttcattgtgatcagagaacaaattctgtatgatttccatactttggaatttgatgggatcctgagtatggacaaatttaggaaatg-ttcacctgtgcTTGTTAAATGATGAC--AATCATcttcacaagaaacattttttgtaacgt- i dasNov3.JH569188 I 2 C 0 e otoGar3.GL873575 10985051 577 - 12073884 I e canFam3.chr1 56218381 167 + 122678785 I a score=546830.000000 s hg38.chr6_KB021644v2_alt 155948 57 + 185823 GTGCAGAAAGCTAAGGCATTAGCACTACCATTACTTACA-TTCAGAGGGAAAGACATT s panTro5.chr6 173612715 57 + 175400573 GTGCAGAAAGCTAAGGCATTAGCACTACCATTACTTACA-TTCAGAGGGAAAGACATT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171846009 57 + 173848474 GTGCAGAAAGCTAAGGCAATAGCACTACCATTACTTACA-TTCAGAGGGAAAGACATT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11529110 56 - 12463322 GTGCAGAAAGCTAAGGCATTAGCACTACCATTACTTACA-TTCAG-GGGAAAGACATT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156361914 57 + 157873769 GTGCAGACAGCTAAGGCATTAGCACTACCATTACTTACA-TTTAGAGGGAAAGACATT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170389379 57 + 172585720 TTGCAAAAAGCTAAGGCATGAGCACTACCATTACTTACA-TTTATAGGGAAAGAAATT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169132669 57 - 170955103 TTGCAAAAAGCTAAGGCATGAGCACTACCATTACTTACA-TTTATAGGGAAAGAAATT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8419401 57 + 10161646 TTGCAAAAAGCTAAGGCATGAGCACTACCATTACTTACA-TTTATAGGGAAAGAAATT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1449762 57 + 3144229 TTGCAAAAAGCTAAGGCATGAGCACTACCATTACTTACA-TTTATAGGGAAAGAAATT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96735356 57 + 98384682 TTGCAAAAAGTTAAGGCATGAGCGCTACCGTTACTTACA-TTTATAGGGAAAGAAATT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8281832 57 - 10857215 TTGCAAAAAGCTAAGGCATGAGCGCTACCATTCCTTACA-TTTATAGGGAAAGAAATT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15661320 57 - 23502949 TTGCAGAAAACTAAGGCATGAGCACTACCATTACTTACA-TTTATAGGGAAAGAAATT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169944777 57 + 171630274 TTGCAGAAAGTGAGGGCCTTAGCACTACCAGGACTTACA-TTTATAGATAAAGAAATG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1344893 57 - 2905041 TTGCAGAAAGCGAAGGCATTAGCACTACCATTACTTACA-TTTATAGATAAAGAAATT i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1310106 56 - 2164891 ttgcggaaatcta-ggcattagcactgccattacttaca-tttatagataaagaaatt i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1555379 57 - 1813869 CTGCAGAAAGCTAAGGTGTTAGCACTACCATTACTTACG-TTTATAGGTAAAGAAATT i aotNan1.NW_018494782v1 C 0 C 0 s canFam3.chr1 56218548 57 + 122678785 ATACTTGGAATTAAAATGTTGGATTTCAAGTTTTTTACA-TTTCTAGATGAAGAAATT i canFam3.chr1 I 167 C 0 s dasNov3.JH569188 642324 58 + 760995 tcacagcacactaaggaattagcactaccattgttcccattttgtaggtgaagaaact i dasNov3.JH569188 C 0 I 155 e otoGar3.GL873575 10985051 577 - 12073884 I a score=2277800.000000 s hg38.chr6_KB021644v2_alt 156005 235 + 185823 AAATGAGGTCATACTTGTTAAAACTTTTGAAGACAGAAATATA-TTTTCAGTAAATTATTATT---------ACTTTAGATT-TT-TTATTTCATGCTCTGAGCTAATTATTGACTTCAGGTATTGTGTGGTTAGGGGAAGGTTT-GGG-TTTG-GTAACTGTGGAAACCCAAATCCTCACTACCTGTGTGg-------gtggccaggaggcct--------gtgttgctgtctcgccctgggagggtggctcctccagtgtggg s panTro5.chr6 173612772 236 + 175400573 AAATGAGGCCATACTTGTTAAAACTTTTGAAGACAGAAATATA-TTTTCAGTAAATTATTATT---------ACTTTAGATT-TT-TTATTTCATGCTCTGAGCTAATTATTGACTTCAGGTATTGTGTGGTTAGGGGAAGGTTT-GGGATTTG-GTAACTGTGGAAACCCAAATCCTCACTACCTGTGTGg-------gtggccaggaggcct--------gtgttgctgtctcgccctgggagggtggctcctccagtgtggg i panTro5.chr6 C 0 C 0 s panPan2.chr6 171846066 236 + 173848474 AAATGAGGCCATACTTGTTAAAACTTTTGAAGACAGAAATATA-TTTTCAGTAAATTATTATT---------ACTTTAGATT-TT-TTATTTCATGCTCTGAGCTAATTATTGACTTCAGGTATTGTGTGGTTAGGGGAAGGTTT-GGGATTTG-GTAACTGTGGAAACCCAAATCCTCACTACCTGTGTGg-------gtggccaggaggcct--------gtgttgctgtctcgccctgggagggtggctcctccagtgtggg i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11529166 236 - 12463322 AAATGAGGCCATACTTGTTAAAACTTTTGAAGACAGAAATACA-TTTTCAGTAAATTATTATT---------ACTTTAGATT-TT-TGATTTCATGCTCTGAGCTAATTATTGACTTCAGGTATTGTGTGGTTAGGGGAAGGTTT-GGGATTTG-GTAACTGTGGAAACCCAAATCCTCACTACCTGTGTGg-------gtggccaggaggcct--------gtgttgccgtctcgccctgggagggtggctcctccagtgtggg i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156361971 247 + 157873769 AAATGAGGTCATACTTGTTAAAACTTTTGAAGACAGAAATATA-TTTTCAGTAAATTATTATT---ATC---ACTTTAGATT-TT-TGATTTCATGCTCTGAGCTAATTATTGACTTCAGGTATTGTGTGGTTAGGGGAAGGTTT-GGGATTTG-GTAGCTGTGGAAACCCAAATCCTCACTACCTGTGTGG-------GTGGCCAGGAGGCCTGTGTTGCcgtgttgctgtctcgccctgggagggtggctcctccagtgtggg i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170389436 240 + 172585720 AAATGAGGTCATACTTGTTAAAACTTGTGAAGATCGAAATATATTTTTCAGTAAATTATTATT---ATC---ACTTTAGATT-TT-TGATTTCATGCTCTGAGCTAGTTATTGACTTCTGGTATTGTATGGTTAGGGGAAGGTTT-GGGCTTTG-GTAACTGTGGAAACTCAAATCCTCACTACCTGTGTGg-------gtggccaggaggcct--------gtgtggccatctcaccctgggagtgtgactcctccaatgtggg i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169132726 240 - 170955103 AAATGAGGTCATACTTGTTAAAACTTGTGAAGATCAAAATATATTTTTCAGTAAATTATTATT---ATC---ACTTTAGATT-TT-TGATTTCATGCTCTGAGCTAGTTATTGACTTCTGGTATTGTATGGTTAGGGGAAGGTTT-GGGCTTTG-GTAACTGTGGAAACTCAAATCCTCACTACCTGTGTGG-------GTGGCCAGGAGGCCT--------GTGTGGCCATCTCACCCTGGGAGTGTGACTCCTCCAATGTGGG i macFas5.chr4 C 0 I 374 s macNem1.NW_012011000v1 8419458 240 + 10161646 AAATGAGGTCATACTTGTTAAAACTTGTGAAGATCGAAATATATTTTTCAGTAAATTATTATT---ATC---ACTTTAGATT-TT-TGATTTCATGCTCTGAGCTAGTTATTGACTTCTGGTATTGTATGGTTAGGGGAAGGTTT-GGGCTTTG-GTAACTGTGGGAACTCAAATCCTCACTACCTGTGTGG-------GTGGCCAGGAGGCCT--------GTGTGGCCATCTCACCCTGGGAATGTGACTCCtccaatgtggg i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1449819 240 + 3144229 AAATGAGGTCATACTTGTTAAAACTTGTGAAGATCGAAATATATTTTTCAGTAAATTATTATT---ATC---ACTTTAGATT-TT-TGATTTCATGCTCTGAGCTAGTTATCGACTTCTGGTATTGTATGGTTAGGGGAAGGTTT-GGGCTTTG-GTAACTGTGGAAACTCAAATCCTCACTACCTGTGTGG-------GTGGCCAGGAGGCCT--------GTGTGGCCATCTCACCCTGGGAGTGTGACTCCtccaatgtggg i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96735413 240 + 98384682 AAATGAGGTCATACTTGTTAAAACTTGTGAAGATCGAAATACATTTTTCAGTAAATTATTATT---ATC---ACTTTAGATT-TT-TGATTTCATGCTCTGAGCTAGTTATCGACTTCTGGTATTGTATGGTTAGGGGAAGGTTT-GGGCTTTG-GTTACTGTGGAAACTCAAATCCTCACTACCTGTGTGG-------GTGTCCAGGAGGCCT--------Gtgtggccgtctcgccctgggagggtgactcctccaatgtggg i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8281889 240 - 10857215 AAATGAGGTCATACTTGTTAAAACTTGTGAAGATCGAAATATATTTTTCAGTAAATTATTACT---ATC---ACTTTAGATT-TT-TGATTTCATGCTCTGAGCTAGTTATCGACTTCTGGTATTGTATGGTTAGGGGAAGGTTT-GGGCTTTG-GTAACTGTGGAAACTCAAATCCTCACTACCTGTGTGG-------GTGGCCAGGAGGCCT--------GTGTGGCCATCTCACCCTGGGAGTGTGACTCCTCCAATGTGGG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15661377 240 - 23502949 ACATGAGGTCATACTTGTTAAAACTTTTGAAGATCGAAATATATTTTTCAGTAAATTATTATT---ATC---ACTTTAGATT-TT-TGATTTCATGCTCTGAGCTAGTTATCGACTTCTGGTATTGTATGGTTAGGGGAAGGTTT-GGGATTTG-GTAACTGTGGAAACTCAAATCCTCACTACCTGTGTGg-------gtggccaggaggcct--------gtgtggctgtctcaccctgggagggtgactcctcccatatggg i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169944834 239 + 171630274 AAATGCAGTCATACCTGTTAAAACTTTTGAAGAT-GAAAGATATTTTTCAGTAAATTATTATC---GTC---ACTTGAGATG-TT-TGATTCTGGGCTCTGAGCCTGTTACTGACTTCAGGTATTGGGTGGTTAGGGGGAGGCTT-GGGATCTGAGTGACTGTGGAAACCCAAATCCTTACTACCCTTGTGg-------gcaaccaggaggctt--------gtgtggc-atcttgccctgggagtgtggctcctccaatgtggg i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1344950 239 - 2905041 AAATGAAGTCATACTTGTTAAAACTTTTGAAGAT-GAAAGATATTTTTCAGTAAATTATTATT---GTC---ACTTTAGATG-TT-TGATTCCATGCTCTGAGTCTGTTATTGACTTCAGGTATTGGGTGGTTAGGGGAAGGCTG-GGGATTTGAGTAACTGTGGAAACCCAAATCCTCACTGCCCTTGTGG-------GCAACTGGAAGGCTT--------atgtggc-atcttgccctgggagggtggctcctccaatttggg i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1310162 234 - 2164891 aaATGAAGTCATACTTT----AACTTTTGAAGAT-GAAAGATATTTTTCAGTAAATTATTATT---GCC---ACTTTAGATG-TT-TGA-TCAGTGCGCTGAGCCTGTTACTGACTTCAGGTATTGGGTGGTTAGGGGAAGGCTT-GGGATTTGAGTAACTATGGAAACGCAAATCCTCACTGCCCATGTGG-------ACGACTGGGAGGCTc--------gtgtggc-atcttgccctgggagggtggctcctccaatttggg i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1555436 228 - 1813869 CAGTGAGGTC------------ACTTTGGAAGATAGTAAGATATTTTTCAGTAAATTATTATT---GTC---ACTTTAGATG-TT-TGATTCTGTGCTCTGAGCCTCTTACTGACTTCAGGTATTGGGTGGTTAGGGCAAGGCTT-GGGATTTCGGTAACTGTGGAAACCCAAATCCTCACTACCCATGTGG-------GCGACCGGGAGGCTc--------gtgtggc-atcttgccctgggagggtggctcctcccatttggg i aotNan1.NW_018494782v1 C 0 C 0 s canFam3.chr1 56218605 223 + 122678785 AAATGAGATCATACTTGTGGAAACATTCGAAAATCGAAAAATGTTTTTAAGTAAGTTATCATTGTTATC---ACTTCAGATCAAG-TGATTTCCAACTCTTGTCTTATTATGGACTCAAGACTTCTGAATGGGAGGGAGATCTCT-GGAATCTGAGCAACTGC--AAACCTAGGTCATTAGTGTCCCCATAG--------CAGCTGGgagcact--------cc------------------aagtgaggctagtccaa-atgga i canFam3.chr1 C 0 I 1 s dasNov3.JH569188 642537 240 + 760995 aaatgagatcatacctgttaaagcatttgaaagttgaaatatactTTTAAGTAAATTGTAATT---GTTGCGACTTCAGATT-TTGTGATTTCTTGCTC--AGCAAGGTATCAACTTAGGGCATTAGATGATTTAAGGAAGGCTTCGGAGTTTG-CCAACTTTGGAAGCCTAGATCATccgt-ctaatatggtaactgcttgccttagagactt--------caatgag--------ccttgaaatgtgg-tgctctgaaatgag i dasNov3.JH569188 I 155 C 0 e otoGar3.GL873575 10985051 577 - 12073884 I a score=227448.000000 s hg38.chr6_KB021644v2_alt 156240 26 + 185823 atgtgttgtaggtgtaacatacacac s panTro5.chr6 173613008 26 + 175400573 atgtgttgtaggtgtaacatacacac i panTro5.chr6 C 0 C 0 s panPan2.chr6 171846302 26 + 173848474 atgtgttgtaggtgtaacatacacac i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11529402 26 - 12463322 atgtgttgtaggtgtaacatacacac i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156362218 26 + 157873769 atgtgttgtaggtgtaacatacacac i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170389676 24 + 172585720 acgtgttgtaggtgtaacacacac-- i rheMac8.chr4 C 0 I 374 s macFas5.chr4 169133340 24 - 170955103 atgtgttgtaggcgtaacatacac-- i macFas5.chr4 I 374 C 0 s macNem1.NW_012011000v1 8419698 24 + 10161646 acgtgttgtaggtgtaacacacac-- i macNem1.NW_012011000v1 C 0 I 280 s cerAty1.NW_012002071v1 1450059 24 + 3144229 acgtgttgtaggtgtaacacacac-- i cerAty1.NW_012002071v1 C 0 I 281 s chlSab2.chr13 96735653 24 + 98384682 atatgttgtaggtgtaacacacac-- i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8282129 24 - 10857215 AGGTGTTGTAGGTGTAACACACAC-- i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15661617 24 - 23502949 acgtgttgtaggtgtaacatacac-- i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169945073 26 + 171630274 atgtgctgtgggtgtaaagtccacac i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1345189 26 - 2905041 atgtgctgtaggtgtaaagtatacac i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1310396 26 - 2164891 atgtgttgtaggtgtaaagtacacat i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1555664 26 - 1813869 atgtgtcgtaggtgtgaagtacacac i aotNan1.NW_018494782v1 C 0 C 0 s canFam3.chr1 56218829 26 + 122678785 atgtgctaaacgtgcagaatgcacac i canFam3.chr1 I 1 C 0 s dasNov3.JH569188 642777 26 + 760995 atgtgctatgagtgtagaagacatgc i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10985051 577 - 12073884 I a score=160435.000000 s hg38.chr6_KB021644v2_alt 156266 14 + 185823 -cgatttcaaagact s panTro5.chr6 173613034 14 + 175400573 -cgatttcaaagact i panTro5.chr6 C 0 C 0 s panPan2.chr6 171846328 14 + 173848474 -cgatttcaaagact i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11529428 14 - 12463322 -cgatttcaaagact i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156362244 14 + 157873769 -cgatttcaaagact i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170390074 14 + 172585720 -cgatttcaaagact i rheMac8.chr4 I 374 C 0 s macFas5.chr4 169133364 14 - 170955103 -cgatttcaaagact i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8420002 14 + 10161646 -cgatttcaaagact i macNem1.NW_012011000v1 I 280 C 0 s cerAty1.NW_012002071v1 1450364 14 + 3144229 -cgatttcaaagact i cerAty1.NW_012002071v1 I 281 C 0 s chlSab2.chr13 96735677 14 + 98384682 -cgatttcaaagact i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8282153 14 - 10857215 -CGATTTCACAGACT i manLeu1.NW_012106474v1 C 0 I 15487 s colAng1.NW_012114488v1 15661641 14 - 23502949 -cgatttcaaagact i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169945099 14 + 171630274 -tgatttcagagact i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1345215 14 - 2905041 -cgatttcagagact i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1310422 14 - 2164891 -cgatttcagagact i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1555690 14 - 1813869 -cgatttcagagact i aotNan1.NW_018494782v1 C 0 C 0 s canFam3.chr1 56218855 14 + 122678785 -ccaaggtgaagact i canFam3.chr1 C 0 I 4 s dasNov3.JH569188 642803 15 + 760995 tggctctcagagact i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10985051 577 - 12073884 I a score=1068563.000000 s hg38.chr6_KB021644v2_alt 156280 135 + 185823 ctgtaggaaagaa----------agaatgtaaagtatggaattaa-tattgttatattgagtacatgctggaacagtaaccttagggatagactgggcta--gatcaaacgtatcgttaaagcgaatttcat-cc-----tttttt-ACGTGATT s panTro5.chr6 173613048 135 + 175400573 ctgtaggaaagaa----------agaatgtaaagtatggaattaa-tatttttatattgagtacatgctggaacagtaaccttagggatagactgggcta--aatcaaacgtattgttaaagcgagtttcat-cc-----tttttt-ACGTGATT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171846342 135 + 173848474 ctgtaggaaagaa----------agaatgtaaagtatggaattaa-tgttgttatattgagtacatgctggaacagtaaccttagggatagactgggcta--aatcaaacgtattgttaaagcgagtttcat-cc-----ttcttt-ACGTGATT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11529442 135 - 12463322 ctgtaggaaagaa----------agaatgtaaagtatggaattaa-tattgttatattgagtacatgctggaatagtaaccttagggatagactgggcta--aatcaaacgtattgttaaagtgagtttcat-cc-----tttttt-ACATGATT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156362258 134 + 157873769 gtgtaggaaagaa----------agaatgtaaagtatgggattaa-tattgtcatattgagtacatgctggaatagtaaccttggggatagactgggcta--aatcaaacatattatt-cagtgagtttcat-cc-----ttgttt-GCGTGACT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170390088 137 + 172585720 ctgtaggaaagaa----------agaatgtaaagtatcgaattaa-tattgtcatattgagtacatgctggaatagtaatcttaggaatagactgggcta--aatcaaacatattattacagtgagtttcat-cc---tttttttt-GCGTTATC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169133378 137 - 170955103 ctgtaggaaagaa----------agaatgtaaagtatcaaattaa-tattgtcatattgagtacatgctggaatagtaatcttaggaatagactgggcta--aatcaaacatattattacagtgagtttcat-cc---tttttttt-gcgttatc i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8420016 138 + 10161646 ctgtaggaaagaa----------agaatgtaaagtatcaaattaa-tattgtcatattgagtacatgctggaatagtaatcttaggaatagactgggcta--aatcaaacatattattacagtgagtttcat-cc--ttttttttt-gtgttatc i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1450378 137 + 3144229 ctgtaggaaagaa----------agaatgtaaagtatcgaattaa-tattgtcatattgagtacatgctggaatagtaatcttaggaacagactgggcta--aatcaaacatattattacagtgagtttcat-cc---tttttttt-gtgttatc i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96735691 137 + 98384682 ctgtaggaaagaa----------agaatgtaaagcatcgaattaa-tattgtcatattgagtacatgctggaatagtaatcttaggaatagcctgggcta--aatcaaacatattattacagtgaatttcat-cc---tttttttt-acattATC i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15661655 136 - 23502949 ctataggaaagaa----------agaatgtaaagtattgaattaa-tattgtcatattgaatacatgctggaatagtaatcttaagaatagactgggcta--aatcaaac--attattacagtgagtttcat-cc---ttttttttaacgttatc i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169945113 139 + 171630274 ctgcaggaaagaa----------gggatgtagagttttgcattaa-tattgtcatattgagtacatgctggaatagcaatcttagggacagattgggctaatagtaaaatgtataattaaaatgagtttcatgct----ttttttt-actttttt i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1345229 138 - 2905041 ctgcaggaaagaa----------ggaatgtaaagttttgcattaa-cattgtcatataaagtacgtgctggaatagcaatcttagggacagacggagctaatagtaaaatgtattattaaaatgagtttcat-cc----ttttttt-actttatt i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1310436 135 - 2164891 ctgcaggaaagaa----------ggaatgtaaagtttcgcattaa-tattgtcatattaagtacatgctggaatagcaatcttagggaaagactgg---aatagtaaaatgtattattaaaatgagttttgt-cc----ttctttt-actttatt i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1555704 137 - 1813869 ctgcaggaaagaa----------ggaatgtaaagttttgcattaa-tattgtcatattaagtacatgctggaatagcaatcttagggacagactgagctaatagtaaaatgtgttactaaaatgagtttcat-cc----tt-tttt-actttatt i aotNan1.NW_018494782v1 C 0 C 0 s canFam3.chr1 56218873 145 + 122678785 atgaaaaaaagaaagaatgtgagagaatgtaagatgtctcattaattctttccatagtcattacatgtttggataatgggctttgggatgtattgg-tta--aggaagatatggtgtcagagttaatgtcat-ct-gtttcttctt-gctt---- i canFam3.chr1 I 4 I 1281 s dasNov3.JH569188 642818 132 + 760995 tcatatgaaaaaa----------atgctgtaaaatatctcattag-taattttatattgtttatatgttggaataata---tttgggata-----agtta--aatacaatatactattcaagttaattttac-cttttcttttttt-actttatt i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10985051 577 - 12073884 I e manLeu1.NW_012106474v1 8282167 15487 - 10857215 I a score=941809.000000 s hg38.chr6_KB021644v2_alt 156415 117 + 185823 AAGGCCGCTCCGGGAAGA--------------------------TTGAGGT----------------------AGTGCTGGCCGTGGTGCTTTCTCTCA-AGCAAAGTGCAGGC--------CTGGGAACGAGCACTAACTAACCACAGCTGCTCACTACG-ACCTACAGGTGCT s panTro5.chr6 173613183 117 + 175400573 AAGGCCGCTCCGGGAAGA--------------------------TTGAGGT----------------------AGTGCTGGCCGTGGTGCTTTCTCTCA-AGCAAAGTGCGGGC--------CTGGGAACGAGCACTAACTAACCACAGCTGCTCACTACG-ACCTACAGGTGCT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171846477 117 + 173848474 AAGGCCGCTCCGGGAAGA--------------------------TTGAGGT----------------------AGTGCTGGCCGTGGTGCTTTCTCTCA-AGCAAAGTGCGGGC--------CTGGGAACGAGCACTAACTAACCACAGCTGCTCACTACG-ACCTACAGGTGCT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11529577 117 - 12463322 AAGGCCGCTCCGGGAAGA--------------------------TTGAGGT----------------------AGTGCTGGCCGTGGTGCTTTCTCTCA-AGCAAAGTGCAGGC--------CTGGGAACGGGCACTAACTAACCACAGCTGCTCACTACG-ACCTACAGGTGCT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156362392 117 + 157873769 AAGGCGGCTCCGGGAGGA--------------------------TTGAGGT----------------------AGTGCTGGCCACGGTGCTTTCTCTCA-AGCGAAGTGCAGGC--------CTGGGAATGGGCACTAATGAACCACAGCTGCTCACTATG-ACCTACAGGTGCA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170390225 117 + 172585720 AAGGCTGCTCCTGAAAGA--------------------------TTGAGGT----------------------AGTGCTGGCCATGGTGCTTTCTCGCA-AGCAAAGTGCAGGG--------CTGGGAACAGGCACTAACTAACCACAGCTGCTTACTGCG-ACCTACAGGTGCC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169133515 117 - 170955103 aaggctgctcctggaaga--------------------------ttGAGGT----------------------AGTGCTGGCCATGGTGCTTTCTCGCA-AGCAAAGTGCAGGT--------CTGGGAACAGGCACTAACTAACCACAGCTGCTTACTGCG-ACCTACAGGTGCC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8420154 117 + 10161646 aaggctgctcctggaaga--------------------------ttGAGGT----------------------AGTGCTGGCCATGGTGCTTTCTCGCA-AGCAAAGTGCAGGT--------CTGGGAACAGGCACTAACTAACCATAGCTGCTTACTGCG-ACCTACAGGTGCC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1450515 117 + 3144229 aaggccgctcctggaaga--------------------------ttGAGGT----------------------AGTGCTGGCCATGGTGCTTTCTCGCA-AGCAAAGTGCAGGT--------CTGGGAACAGGCACTAACTAACCACAGCTGCTTACTGCG-ACCTACAGGTGCC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96735828 117 + 98384682 AAGGCCACTCCTGGAAGA--------------------------CTGAGGT----------------------AGTGCTGGCCATGGTGCTTTCTTGCA-AGCAAAGTGCAGGC--------CTGGGAACAGGTACTAACTAACCACAGCTGCTTACTACG-ACCTACAGGTGCC i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15661791 117 - 23502949 aaggccgctcctggaaga--------------------------ttGAGGT----------------------AGTGCTGGCCATGGTGCTTTCTCACA-AGCAAAGTGCAGGC--------CTGGGAACAGGTACTAACTAACCACAGCTGCTTACTGCG-ACCTACAGGTGCC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169945252 117 + 171630274 aaggctgttcctggaaga--------------------------ctGAGGT----------------------AGTGCTGGCTGTAGTGTTTTATCTCA-AGGGAAGTGCAGGC--------CTGGGAATGCGCATTAACTCAGCACAGCTGCTCACTATG-ACCTACAAGTGCC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1345367 117 - 2905041 aaggctgctcctggaaga--------------------------ctGAGGT----------------------AGTGCTGGCTGTGGTGCTTTTTCTCA-AGGGAAGTGCAGGC--------CTGGCAACGGGCATTAACTCACCACAGCTGCTCACTATG-ACCTACAAGTGCC i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1310571 117 - 2164891 aaggccgctcctggaaga--------------------------ctGAGGT----------------------AGTGCTGGCCGTGGTGCTTTTTCTCA-AGGGAAGTGCAGGC--------CTGGGAACGGGTATTAACTCACCACAGCTGCTCACTATG-ACCTGCAAGTGCC i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1555841 96 - 1813869 aaggccgctcctggaaga--------------------------ctGAGGT----------------------AGTGC----------------------AGGGAAGTGCAGGC--------CTGGGAACAGGCATTAACTCACCACAGCTGCTCCCTATG-ACCTACAAGTGCC i aotNan1.NW_018494782v1 C 0 C 0 s dasNov3.JH569188 642950 171 + 760995 agcgtggctccaagaaaatctaaaattacatatggagttcgcatttgtggttttcactatatctctattgaacagtgctgATCTAGAAGTTTCCTATCACAGCAAGGTAAAGGCACAAAAGACTGTGGCT--GTACCAAC--ATCTGAAATTATTGTTATGTGCATACATGTACC i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10985051 577 - 12073884 I e canFam3.chr1 56219018 1281 + 122678785 I e manLeu1.NW_012106474v1 8282167 15487 - 10857215 I a score=291248.000000 s hg38.chr6_KB021644v2_alt 156532 36 + 185823 CTGGATTTTAACCTGTTTTAACTGCCCAATGTCACG s panTro5.chr6 173613300 36 + 175400573 CTGGATTTTAACCTGTTTTAACTGCCCAATGTCACG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171846594 36 + 173848474 CTGGATTTTAACCTGTTTTAACTGCCCAATGTCACG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11529694 36 - 12463322 CTGGATTTTAACCTGTTTTAACTGCCCAATGTCACG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156362509 36 + 157873769 CTGAATTTTAACTTGTTTCAACTGCCCAATGTCATG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170390342 35 + 172585720 CTGGATTTTAACCTGTTTTAACTGCCC-ATGTCACG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169133632 35 - 170955103 CTGGATTTTAACCTGTTTTAACTGCCC-ATGTCACG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8420271 35 + 10161646 CTGGATTTTAACCTGTTTTAACTGCCC-ATGTCACG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1450632 35 + 3144229 CTGGATTTTAACCTGTTTTAACTGCCC-ATGTCACG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96735945 35 + 98384682 CTGGATTTTAACCTGTTTTAACTGCCC-ATGTCATG i chlSab2.chr13 C 0 I 7 s colAng1.NW_012114488v1 15661908 35 - 23502949 CTGGATTTTAACCTGTTTTAACTGCCC-ATGTCATG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169945369 35 + 171630274 CTGGATTTGAACCTGCTTGAACTGCTC-AGGTCATG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1345484 35 - 2905041 CTGGATTTGAACTTGCTTGAACTGCCC-AGGTCACG i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1310688 35 - 2164891 CTGGATTTGAACTTGCTTGAACTGCCC-GGGTCACG i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1555937 35 - 1813869 CTGGATTTGAACCTGCTTGAACTGCCC-AGGTCACG i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10985628 34 - 12073884 CTGGGTTTTAATCTGCTTTAATCGCCT-GTGCACT- i otoGar3.GL873575 I 577 C 0 s dasNov3.JH569188 643121 30 + 760995 ATGGATTTTAG--TGTTTTCATTACTT-GAATA--- i dasNov3.JH569188 C 0 C 0 e canFam3.chr1 56219018 1281 + 122678785 I e manLeu1.NW_012106474v1 8282167 15487 - 10857215 I a score=87387.000000 s hg38.chr6_KB021644v2_alt 156568 13 + 185823 GCCATTTTCCACA s panTro5.chr6 173613336 13 + 175400573 GCCATTTTCCACA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171846630 13 + 173848474 GCCATTTTCCACA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11529730 12 - 12463322 GCCATTTTCCAC- i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156362545 13 + 157873769 GCCATTTTCCACG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170390377 13 + 172585720 GCCATTTTCCATG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169133667 13 - 170955103 GCCATTTTCCATG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8420306 13 + 10161646 GCCATTTTCCATG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1450667 13 + 3144229 GCCATTTTCCATG i cerAty1.NW_012002071v1 C 0 C 0 s colAng1.NW_012114488v1 15661943 13 - 23502949 GCCATTTTCCACG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169945404 13 + 171630274 GCCATTTTCCATG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1345519 13 - 2905041 GCCATTTTCCATG i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1310723 13 - 2164891 GCCATTTTCCATG i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1555972 13 - 1813869 GCCATTTTCTATG i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10985662 9 - 12073884 ACCATTTTT---- i otoGar3.GL873575 C 0 C 0 s dasNov3.JH569188 643151 4 + 760995 GCTG--------- i dasNov3.JH569188 C 0 C 0 e canFam3.chr1 56219018 1281 + 122678785 I e chlSab2.chr13 96735980 7 + 98384682 I e manLeu1.NW_012106474v1 8282167 15487 - 10857215 I a score=22646.000000 s hg38.chr6_KB021644v2_alt 156581 3 + 185823 TCT s panTro5.chr6 173613349 3 + 175400573 TCT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171846643 3 + 173848474 TCT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11529742 2 - 12463322 -CT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156362558 3 + 157873769 TCT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170390390 3 + 172585720 TCT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169133680 3 - 170955103 TCT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8420319 3 + 10161646 TCT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1450680 3 + 3144229 TCT i cerAty1.NW_012002071v1 C 0 C 0 s manLeu1.NW_012106474v1 8297654 3 - 10857215 TCT i manLeu1.NW_012106474v1 I 15487 C 0 s colAng1.NW_012114488v1 15661956 3 - 23502949 TCT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169945417 3 + 171630274 TTT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1345532 3 - 2905041 TTT i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1310736 3 - 2164891 TTT i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1555985 3 - 1813869 CTT i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10985671 1 - 12073884 --T i otoGar3.GL873575 C 0 C 0 s dasNov3.JH569188 643155 3 + 760995 CCT i dasNov3.JH569188 C 0 C 0 e canFam3.chr1 56219018 1281 + 122678785 I e chlSab2.chr13 96735980 7 + 98384682 I a score=3895904.000000 s hg38.chr6_KB021644v2_alt 156584 398 + 185823 TTTCTAAATCTACATTTATAAACA-TAAATACAAATGAATTGTATTTACA-----TAGTTGTGTATTCAACTGTAGATAATCAGAAATTGAC----AATGGTTTAAGTA----------------A-TA-TTTTTCCTGCT-ACCGTTTGT-TAGAAGGAACTTGGAAAGAGGGAATGACGGGCTCTGCG-CACT----CGGGATGTCTGCC-GGGAACATGAGTCTTCCGTTGT-----CCACCCTTCATTGTCTCTTAggttcagaa-----------tggctgccaca-cccccaggcatcacgtcagcatcccagcaggagg-aaaaaCCTGAGTCAAAAGCATTTGCTTTGTAGGACTCTGTCTTTTCCTTCAGGGAGGGATATCTGCCCCTG--TCCACAGCTTACAGCTCACTGTGCAGAAATGAGTATTACTGTCTCCATAGGC-----CC- s panTro5.chr6 173613352 398 + 175400573 TTTCTAAATCTACATTTATAAACA-TAAATACAAATGAATTGTATTTACA-----TAGTTGTGTATTCAACTGTAGATAATCAGAAATTGAC----AATGGTTTAAGTA----------------A-TA-TTTTTCCTGCT-ACCGTTTGT-TAGAAGGAACTTGGAAAGAGGGAATGACGGGCTCTGCG-CACT----CGGGATGTCAGCC-GGGAACATGAGTCTTCCGTTGT-----CCACCCTTCATTGTCTCTTAGGTTCAGAA-----------TGGCTGCCACA-CCCCCAGGCATCACATCAGCATCCCAGCAGGAGG-AAAAACCTGAGTCAAAAGCATTTGCTTTGTAGGACTCTGTCTTTTCCTTCAGGGAGGGATATCTGCCCCCG--TCCACAGCTTACAGCTCACCGTGCAGAAATGAGTATTACTGTCTCCATAGGC-----CC- i panTro5.chr6 C 0 C 0 s panPan2.chr6 171846646 398 + 173848474 TTTCTAAATCTACATTTATAAACA-TAAATACAAATGAATTGTATTTACA-----TAGTTGTGTATTCAACTGTAGATAATCAGAAATTGAC----AATGGTTTAAGTA----------------A-TA-TTTTTCCTGCT-ACCGTTTGT-TAGAAGGAACTTGGAAAGAGGGAATGACGGGCTCTGCA-CACT----CGGGATGTCAGCC-GGGAACATGAGTCTTCCGTTGT-----CCACCCTTCATTGTCTCTTAGGTTCAGAA-----------TGGCTGCCACA-CCCCCAGGCATCACATCAGCATCCCAGCAGGAGG-AAAAACCTGAGTCAAAAGCATTTGCTTTGTAGGACTCTGTCTTTTCCTTCAGGGAGGGATATCTGCCCCCG--TCCACAGCTTACAGCTCACCGTGCAGAAATGAGTATTACTGTCTCCATAGGC-----CC- i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11529744 398 - 12463322 TTTCTAAATCTACATTTATAAACA-TAAATACAAATGAATTGTATTTACA-----TAGTTGTGTATTCAACTGTAGATAATCAGAAATTGAC----AATGGTTTAAGTA----------------A-TA-TTTTTCCTGCT-ACCGTTTGT-TAGAAGGAACTTGGAAAGAGGGAACGACGGGCTCTGAG-CGCT----CGGGATGTCAGCC-GGGACCATGAGTCTTCCGTTGT-----CCACCCTTCATTGTCTCTTAGGTTCAGAA-----------TGGCTGCCACA-CCCCCAGGCATCACGTCAGCATCCCAGCAGGAGG-AAAAACCTGAGTCAAAAGCATTTGCTTTGTAGGACTCTGTCTTTTCCTTCAGGGAGGGATATCTGCTCCCG--TCCACAGCTTACAGCTCACCGTGCAGAAATGAGTATTACTGTCTCCATAGGC-----CC- i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156362561 405 + 157873769 TTTCTAAATCTACATTTATAAACA-TAGATACAAATCAATTGTATTTACA-----TAGTTGTGTATTCAACTGTAGATAATCAGAAATTGACAAAGAATGGTTTAAGTA----A---------CCA-TA-TTTTTCCTGCT-ACCATTTGT-TAGAAGAAACTTGGAAAGAGGGAGCAACGAGCTCTGCG-CACT----TGTGATGTCAGCC-GGGACCATGAGTCTTCCGTTGT-----CCACCCTTCATTGTCTCTTAGGTTCAGAA-----------TGGCTGCCACA-CCCCCAGGCATCATGTCAGCATCCCAGCAGGAGG-AAAAACCTGAGTCAAAAGCATTTGCTTTGTAGGACTCTGTCTTTTCCTTCAGGGAGGGTTATCTGCCCCCG--TCCACAGCTTACAGCTCACCACGCAGAAATGAGTATTACTGTCTCCATAGGT-----CC- i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170390393 402 + 172585720 TTTCTAAATCTGCATTTATAAACA-TAAATACAAATCAGTTGTATTTACA-----TAGTTGTGTATTCAACTGTAGACAATCAGAAATTGACAAAGAATGGTTTAAGTA----A---------CAG-TA-TTTTCTCTCTTAACCGTTTGT-TAGAAGAAA-TTGGAAAGAGGGAGTGACAGGCTCTGTG-CACT----CAGGATGTCAGTG-GGAACTGTGAGTCTTCCGTTGT-----CCACACCCCATTGTCTCTTAGGTTCAGAA-----------TGGCTGCCACA-CCTCCAGGCATCGCATCAGCATCCCAGGAGGAGG-AAAACCC---GTCAAAAGCATTTGCTTTGTAGGACTCTGTCCTTTTCTTCAGGGAGGGATATCTGCCCCCA--TCCACAGCTTACAGCTCACCATGCAGAAATGAGTATTATTGTCTCCATAGGC-----CC- i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169133683 402 - 170955103 TTTCTAAATCTGCATTTATAAACA-TAAATACAAATCAGTTGTATTTACA-----TAGTTGTGTATTCAACTGTAGACAATCAGAAATTGACAAAGAATGGTTTAAGTA----A---------CAG-TA-TTTTCTCTCTTAACCGTTTGT-TAGAAGAAA-TTGGAAAGAGGGAGTGACAGGCTCTGTG-CACT----CAGGATGTCAGTG-GGAACTGTGAGTCTTCCGTTGT-----CCACACCCCATTGTCTCTTAggttcagaa-----------tggctgccaca-cctccaggcatcacatcagcatcccagcaggagg-aaAACCC---GTCAAAAGCATTTGCTTTGTAGGACTCTGTCCTTTTCTTCAGGGAGGGATATCTGCCCCCA--TCCACAGCTTACAGCTCACCATGCAGAAATGAGTATTATTGTCTCCATAGGC-----CC- i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8420322 402 + 10161646 TTTCTAAATCTGCATTTATAAACA-TAAATACAAATCAGTTGTATTTACA-----TAGTTGTGTATTCAACTGTAGACAATCAGAAATTGACAAAGAATGGTTTAAGTA----A---------CAG-TA-TTTTCTCTCTTAACCGTTTGT-TAGAAGAAA-TTGGAAAGAGGGAGTGACAGGCTCTGTG-CACT----CAGGATGTCAGTG-GGAACTGTGAGTCTTCCGTTGT-----CCACACCCCATTGTCTCTTAggttcagaa-----------tggctgccaca-cctccaggcatcacatcagcatcccagcaggagg-aaAACCC---GTCAAAAGCATTTGCTTTGTAGGACTCTGTCCTTTTCTTCAGGGAGGGATATCTGCCCCCA--TCCACAGCTTACAGCTCACCGTGCAGAAATGAGTATTATTGTCTCCATAGGC-----CC- i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1450683 402 + 3144229 TTTCTAAATCTGCATTTATAAACA-TAAATACAAATCAGTTGTATTTACA-----TAGTTGTGTATTCAACTGTAGACAAACAGAAATTGACAAAGAATGGTTTAAGTA----A---------CAA-TA-TTTTCTCTCTTAACCGTTTGT-TAGAAGAAA-TTGGAAAGAGGGAGTGACAGGCTCTGTG-CACT----CAGGATGTCAGTG-GGAACTGTGAGTCTTCCGTTGT-----CCACACCCTATTGTCTCTTAggttcagaa-----------tggctgccaca-cctccaggcatcacatcagcatcccagcaggagg-aaAACCC---GTCAAAAGCATTTGCTTTGTAGGACTCTGTCCTTTTCTTCAGGGAGGGATATCTGCCCCCA--TCCACAACTTACAGCTCACCATGCAGAAATGAGTATTATTGTCTCCATAGGC-----CC- i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96735987 403 + 98384682 TTTATAAATGCAGATTTCTAAACA-TAAATACAAATCAAATGTATTTACA-----TAGTTGTGTATTCAACTGTAGAGAATCGGAAATTGACAAAGAATGGTTTAAGTA----A---------CAA-TA-TTTTCCCTCTTAACCGTTTGT-TAGAAGAAA-TTGGAAAGAGGGAGCGACAGGCTCTGAG-CACT----CAGGATGTCAGCG-GGAACTGTGAGTCTTCCGTTGT-----CCACACCCCATTGTCTCTTAggttcagaa-----------tggctgccaca-cctccaggcatcacatcagcatcccagcaggaggaaaaaCCC---GTCAAAAGCATTTACTTTATAGGACTCTGTCCTTTTCTTCAGGGAGGGATATCTGCCCCCA--TCCACAACTTACAGCTCACCATGCAGAAATGAGTGTTATTGCCTCCATAGGC-----CC- i chlSab2.chr13 I 7 C 0 s manLeu1.NW_012106474v1 8297657 402 - 10857215 TTTCTAAATCTGCATTTATAAACA-TAAATACAAATCAGTTGTATTTACA-----TAGTTGTGTATTCAACTGTAGACAATCAGAAATTGACAAAGAATGGTTTAAGTA----A---------CAA-TA-TTTTCTCTCTTAACCGTTTGT-TAGAAGAAA-TTGGAAAGAGGGAGTGACAGGCTCTGTG-CACT----CAGGATGTCAGTG-GGAACTGTGAGTCTTCCGTTGT-----CCACACCCCATTGTCTCTTAggttcagaa-----------tggctgccaca-cctccaggcatcacatcagcatcccagcaggagg-aaAACCT---GTCAAAAGCATTTGCTTTGTAGGACTCTGTCCTTTTCTTCAGGGAGGGATATCTGCCCCCA--TCCACAACTTACAGCTTACCATGCAAAAATGAGTATTATTGTCTCCATAGGC-----CC- i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15661959 401 - 23502949 TTTCTAAATCTGCATTTATAACCA-TAAATACAAATCAATTGTATTTACA-----TAGTTGTGTATTCAACTGTAGATAATCAGAAATTGACAAAGAATGGTTTAAGTA----A---------CAA-TACCTTTCCCTCTTAACCGTTTGT-TAGAAGAAA-TTGGAAA---GGAGTGACAGGCTCTGTG-CACT----CAGGATGTCAGCG-GGAACTGTGAGTCTTCCGTTGT-----CCACACCCCATTGTCTCTTAGGTTCAGAA-----------TGGCTGCCACA-CCTCCAGGCATCACATCAGCATCCCAGCATGAGGAAAAACCC---ATCAAAAGCATTTGCTTTGTAGGACTCTGCCCTTTTCTTCAGGGAGGGATATCTGACCCCA--TCCAGAACTTACGGCTCACCATGCAGAAATGAGTATTATTGTCTCCATAGAC-----CC- i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169945420 397 + 171630274 TTTCTAAATCTACATTTATAAACA-TAAATATAAATCAATGGTTTTTACG-----TAATTGTGTATTCAACTGTAGATAATCAGAAATTGTTGAAGAATGGTTTAAGTA----A---------CAA-TA-TTTTCCCCTCT-ACTGTTTGT-TAGAAGAAACTTGGAAAGAGGGAGCGATGGGCTGTGCA-CACT----CGGGATGTAAGTG-GGGACCATGAgtgttctgttgt-----ccactcagccttgtctcttaggttcagaa-----------tggctcccaca-cctccaggcatcacatcAGCA--------GGAGG-AAAAACCCGAGTCAAAAGCATTAGCTTTGTAGGACTCTGTCCTTTCCTTCAGGGAGGGATATCTGACCCCG--TCCACAGCTTACAGCTCACTGTGCAGAAATGAGTATCATGGTCTACACAGGT-----CC- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1345535 405 - 2905041 TTTCTAAATTTACATTTATAAACA-TAAATATAAATGACTCATTTTTACG-----TAGTTGTGTATTCAACTGTAGATAATCTGAAATTGTTGAAGAATGGTTTAAGTA----A---------CAA-TA-TTTTTCCCTCT-ACTGTTTGT-TAGAAGAAACTTGGAAAGAGGGAGCGATGGGCTCTGCG-CACT----CAGGATATAAGTG-GGGACCATGAGtgttctgttgt-----ctactcagcattgtctcttaggttcagaa-----------tggctcccaca-cctccaggcatcacatcagcatcccagccggagg-aaaaacccaagtcaaaaccattagctttgtaggactctgtcctttccttcaggaagggatatctgaccccg--tccacagcttatagctcgctgtgcagaaatgagtatcatggtctacacagct-----cc- i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1310739 405 - 2164891 TTTCTAAATTTACATTTATAAACA-TAAATATAAATGAATCATTTTTACC-----TAGTTGTGTATTCAACTGTAGGTAATCAGAAATTGTTGAAGAATTGTTTAAGTA----A---------CAA-TA-TTATTCCCTCT-ACTGCTTAT-TAAAAGAAACTTGGAAAGAGGGAGCGATGGGCTCCACA-CACT----CAAGATGTAAGCA-GGGACCGTGAGTGTTCTGTTGT-----CTACTCAGCATTGTCTGTTAGGTTCACAG-----------TGGCTCCCACA-CCTCCAGGCATCATATCAGCATCCCAGCAGGAGG-AAAAACCTGAGTCAAAACCATTAGCTTTGTAGGACTCTGTCCTTTCCTTCAGGGAGGGATATCTGACCCCA--GCCACAGCTTACAGCTCACTGTGCAGAAATGAATATCATGGTCTACACAGGT-----CC- i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1555988 405 - 1813869 TTtctaaatctacatttataaaca-taaatataaatcAATCGTTTTTACG-----TAGTTGTGTATTCAACTGTAGATAATCAGAAATTGTTGAAGAATGGTTTAAGTA----A---------CAGTTT-TTTTTCCCTCT-ACTGTTTGT-TGGAAGAAATTTGGAAAGCGGGAGTGATGGGCTCTGTG-CACT----CAGGATGTAAGTG-GGGACCATGAGTGTTCTGTTGT-----CCACTCAGCATTGTCTCTTAggttcagaa-----------tggctgccaca-cctccaggcatcacatcagcatcccagcaggagg-aaaaacccgagtcaaaagcatc-gatttgtaggactctgtcctttccttcagagagggatatctgaccctg--tccacagcttacagctcactgtgcagaaatgagtatcatggtctacataggt-----cc- i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10985672 361 - 12073884 --------------TTTTTTACCACTGAATA-------------------------------------AACTGTAGATACTGAGAAATCAATAGTGAGTGGTTCAAATAATTAA---------CAC-GA-TTTTTCCTTC--ACTGTTTCTATTAAAGACATTTGTAAATAAGGTATGGCAGGCTGTGCACCACT----CAGGGCATTATCT-GGGACC-TGCGTCATCCAC--T-----CCCTTCTCTGTTACCCTGTAGGCCCAGAA-----------TGGCTGCAGCG-GCTCTGGCCATCTTGCCAGGACTCCAGCAGGTAG-AAAAAGGGGAG-CAAAAGCATTGGATTCCCTCTGCTCTGTGCTTCTCTTCAGGGAGGGATGTCTGGTCTAG--TCTGCAGCTCACGAGTCACTGTCCAGAAATGAGTCTTGTGGTCATCAGGAGC-----CC- i otoGar3.GL873575 C 0 I 1063 s dasNov3.JH569188 643158 441 + 760995 TTCCTACATCTGAA---AAAAGTA-TAACTATAAATCAACTTTTATTTCATTAGCTAAATACGTACTCATCTGTAAGTAATCAGAAATTGG-Aaatagtggtttgaata----agcaccagtttaa-tt-ttttccccctcatgtttctgt-tataagaagtttggaaataaggagtgatgg--tctgtg-ccctatgccaagatgttagccagggaccacag--cttctgtttttcttcccctccatccttatttcttagttttaaagggggctaaaactggctgctgcaccccccaggcattatgtcagcatcaaggcaggaag-aaaaaggaagTGTGGAAGCATTCTCTTCAAAGGCCTCTGTCCTCTCCTTCAGCAACAG-TGTCCTTCCTGGGATCTTCTGTGTTCAGGTCATGGACCAGAGAAGAATCTCCAGGTCCTCATTAGTGATGACCT i dasNov3.JH569188 C 0 C 0 e canFam3.chr1 56219018 1281 + 122678785 I a score=214270.000000 s hg38.chr6_KB021644v2_alt 156982 25 + 185823 --CAGGGAGGCCAGG-------------AGCTGA-------GCCCAC------------------------ s panTro5.chr6 173613750 25 + 175400573 --CAGGGAGGCCAGG-------------AGCTGA-------GCCCAC------------------------ i panTro5.chr6 C 0 C 0 s panPan2.chr6 171847044 25 + 173848474 --CAGGGAGGCCAGG-------------AGCTGA-------GCCCAC------------------------ i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11530142 25 - 12463322 --CAGGGAGGCCAGG-------------AGCTGA-------GCCCAC------------------------ i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156362966 25 + 157873769 --CAGGCAGGCCAGG-------------AGCTGA-------GCCCGC------------------------ i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170390795 25 + 172585720 --CAGGGAGGCTGGG-------------CGCTGA-------GCCTGC------------------------ i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169134085 25 - 170955103 --CAGGGAGGCTGGG-------------CGCTGA-------GCCTGC------------------------ i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8420724 25 + 10161646 --CAGGGAGGCTGGG-------------CGCTGA-------GCCTGC------------------------ i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1451085 25 + 3144229 --CAGGGAGGCCGGG-------------TGCTGA-------GCCTGC------------------------ i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96736390 25 + 98384682 --CCGGGAGGCCGGG-------------CGCTGA-------GCCTGC------------------------ i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8298059 25 - 10857215 --CAGGGAGGCCAGG-------------CGCTGA-------GCCTGC------------------------ i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15662360 25 - 23502949 --CAGGGAGGCTGGG-------------CTCTGA-------GCCTGC------------------------ i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169945817 25 + 171630274 --CAGGGAGACCGGG-------------CGCTGA-------GCCCAC------------------------ i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1345940 25 - 2905041 --cagggaggccggg-------------TGCTGA-------GCCCAC------------------------ i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1311144 25 - 2164891 --CAGGGAGGCCAGG-------------CACTGA-------GCCCAC------------------------ i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1556393 25 - 1813869 --cagggaggctggg-------------TGCTGA-------GCCCAC------------------------ i aotNan1.NW_018494782v1 C 0 C 0 s dasNov3.JH569188 643599 71 + 760995 CAAAGGGAAGTTGGGGGATTGAAGTTGCAGCTGAGGGCATTGCCTCCTTGAAAAAAAAAATTGCATCCCTT i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10986033 1063 - 12073884 I e canFam3.chr1 56219018 1281 + 122678785 I a score=1960058.000000 s hg38.chr6_KB021644v2_alt 157007 207 + 185823 ACTGAAGGCAGGACAATGAAGGGTGGGAAGCTACAGGCCATGCCATCCTCCC-GGGGGAAGAAGC-CATAGCACCTTGGGTTACCAGGGTTTGACATAGCTCTTCCAACATTCC-----AA--A-------AAAAAAAAATGAGGCGACAAAGCATAG-TTTC-TA-------AAAGTTTGAAAAAA----GGGTTTTTATTAAAAGATCAACAATATAGTTTCACTAAAATATG----C- s panTro5.chr6 173613775 212 + 175400573 ACTGAAGGCAGGACAGTGAAGGGCGGGAAGCTACAGGCCATGCCATCCTCCT-GGGGGAAGAAGC-CATAGCACCTTGGGTTACAAGGGTTTGACATAACTCTTCCAACATTCCaaaaaaa--a-------aaaaaaaaaTGAGGCGACAAAGCATAG-TTTC-TA-------AAAGTTTGAAAAAA----GGGTTTTTATTAAAAGATCAACAATATAGTTTCACTGAAATATG----C- i panTro5.chr6 C 0 C 0 s panPan2.chr6 171847069 208 + 173848474 ACTGAAGGCAGGACAGTGAAGGGCGGGAAGCTACAGGCCATGCCATCCTCCT-GGGGGAAGAAGC-CATAGCACCTTGGGTTACAAGGGTTTGACATAACTCTTCCAACATTCC----AAA--A-------AAAAAAAAATGAGGCGACAAAGCATAG-TTTC-TA-------AAAGTTTGAAAAAA----GGGTTTTTATTAAAAGATCAACAATATAGTTTCACTGAAATATG----C- i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11530167 207 - 12463322 ACTGAAGGCAGGACAATGAGGGGCGGGAAGCTACAGGCCATGCCATCTTCCCGGGGGGAAGAAGC-CATAGCACCTTGGGTTACAAGGGTTTGACATAACTCTTCCAACATTCC------A--A-------AAAAAAAAATGAGGCGACAAAGCATAG-TTTC-TA-------AAAGTTTGAAAAAA----GGGTTTTTATTAAAAGATCAACAATATAGTTTCACTGAAATATG----C- i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156362991 204 + 157873769 ACTGAAGGCAGGACAGTGAGGGGTGGGAAGCTGCAGGCCACACCATCTTCCT-GGGGGAAGAAGC-CATAGCACTTTGGGTTACAAGGGTTTGACGTAACTCTTCCAACATTCC-----------------AAAACAAAATGAGGCGACAAAGCACAG-TTTC-TA-------AAAGTTTGAGAAAA----GGGTTTTCATTAAAAGATCAACAATATAGTTTCACTGAAATACA----T- i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170390820 206 + 172585720 ACTGAAGGTAGGACAGTGTGGGGTGGGAAGCTGCAGGCCACACCATCTTCCC-AGGGGAAGAAGC-CATAGCACCTTAGGTTATAAGGGTTTGACGTAACTCTTCCAACATTCC-----AG--A-------AAAAAGAAATGAAGCAACAAAGCATAG-TTTC-TA-------AAAGTTTGAAAAAA----AGGTTTTCATTAAAAGATCAACAATATAGTTTCACTGAAATATG------ i rheMac8.chr4 C 0 I 321 s macFas5.chr4 169134110 207 - 170955103 ACTGAAGGTAGGACAGTGTGGGGTGGGACGCTGCAGGCCACACCATCTTCCC-AGGGGAAGAAGC-CATAGCACCTTAGGTTATAAGGGTTTGACGTAACTCTTCCAACATTCC-----AG--A-------AAAAAGAAATGAAGCAACAAAGCATAG-TTTC-TA-------AAAGTTTGAAAAAA----AGGTTTTCATTAAAAGATCAACAATATAGTTTCACTGAAATAttt----- i macFas5.chr4 C 0 I 287 s macNem1.NW_012011000v1 8420749 206 + 10161646 ACTGAAGGTAGGACAGTGTGGGGTGGGAAGCTGCAGGCCACACCATCTTCCC-AGGGGAAGAAGC-CATAGCACCTTAGGTTATAAGGATTTGACGTAACTCTTCCAACATTCC-----AG--A-------AAAAAGAAATGAAGCAACAAAGCATAG-TTTC-TA-------AAAGTTTGAAAAAA----AGGTTTTCATTAAAAGATCAACAATATAGTTTCACTGAAATATG------ i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1451110 207 + 3144229 ACTGAAGGCAGGACAGTGTGGGGTGGGAAGCTGCAGGCTACACCATCTTCCC-AGGGGAAGAAGC-CATAGCACCTTGGGTTACAAGGGTTTGGCGTAACTCTTCCAACATTCC-----AG--A-------AAAAAGAAATGAAGCAACAAAGCATAG-TTTC-TA-------AAAGTTTGAAAAAA----AGGTTTTCATTAAAAGATCAACAATATAGTTTCACTGAAATATG-C---- i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96736415 209 + 98384682 ACTCAAGGCAGGACAGTGTGGGGTGGGAAGCTGCAGGCTACACCATCTTCCC-AGGGGAAGAAGC-CATAGCACCTTGGGTTACAAGGGTTTGACGTAACTCTTCCAACATTCC-----AGGAA-------AAAAAAAAATGAAGCAACAAAGCATAG-TTTA-TA-------AAAGTTTGAAAAAA----AGGTTTTCATTAAAAGATCAACAATATAGTTTCACTGAAATATG--C--- i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8298084 207 - 10857215 ACTGAAGGCAGGACAGTGTGGGGTGGGAAGCTGCAGGCCACACCATCTTCCC-AGGGGAAGAAGC-CATAGCACCTTAGGTTACAAGGGTTTGACGTAACTCTTCCAACATTCC-----AG--A-------AAAAAGAAATGAAGCAACAAAACATAG-TTTC-TA-------AAAGTTTGAAAAAA----AGGTTTTCGTTAAAAGATCAACAATATAGTTTCACTGAAATATG--C--- i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15662385 208 - 23502949 ACTGAAGGCAGGACAGTGTGGGGTGGGAAGCTGCAGGCCACACCATCTTCCC-AGGGGAAGAAGC-CATAGCACCTTGGGTTACAAGGGTTTGACATAACTCTTCCAACATTCC-----AG-AA-------AAAAAAAAATGAAGCAACAAAGCATAG-TTTC-TA-------AAAGTTTGAAAAAA----AGGTTTCCACTAAAAGATCAACAATATAGTTTCACTGAAATATG---C-- i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169945842 214 + 171630274 GCTGAAGGCAGGACAGTGCGGGGCAGGAAGCTGCAGGCTACGCCATTGTCCC-AGGGAAAGAAGC-TGTAACACCTTGGGTTACAAGTGTTTGACATAACTCTTCCAGCATTCC-----AA--ATTAAAAAAAAAAAAAATGAAGCGAAAAAGCATAG-TTTTATA-------AAAGTTTGAAAAAA----TGGTTTTCATTAAAAGACCAACAATCTAGTTTCACTGAAATACG------ i calJac3.chr4 C 0 I 1 s saiBol1.JH378287 1345965 210 - 2905041 ACTGAAGGCAGGACAGTGTGGGGTGGAAAGCTGCAGGCCATACCGTCTTCCC-GGGGAAAGAAGC-CATAACACCTTGGGTTACAAGTGTTTCACATAACTCTTCCAGCATTCA-----AA--ATT----TAAAAAACAATGAAGTGAGAAAACATAG-TTTTATA-------AAAGTTTGAAAAAA----TGGTTTTCATTAAAAGACCAACAATATGATTTCACTGAAATATG------ i saiBol1.JH378287 C 0 I 1 s cebCap1.NW_016107695v1 1311169 212 - 2164891 ACTGAAGGCAGGACAGTGGGGGGCGGGAAGCTGCAGGCCACGCCGTCTTCCC-GGGGAAAGAAGC-CATAACACCTTGGGTTAAAAGTGTTTGACATAATTCTTCCAGCATTCa-----aa--a--aaaaaaaaaaaaaaTGAAGCAAGAAAGCATAG-TTTTATA-------AAAGTTCGAAAAAA----CGGTTTTCATTAAAAGACCAACAATATGGTTTCACTGAAATATG------ i cebCap1.NW_016107695v1 C 0 I 1 s aotNan1.NW_018494782v1 1556418 213 - 1813869 ACTGAAGGCAGGACAGTGGGGTATGGGAAGCTGCAGGCCACACCATCTTCCT-GGGGGAGGAAGC-CATAATACCTTGGGTTATAAGTGTTTGACATAACTCTTCCAGCATTCA-----AC--A-TAAAAAAAAAAAAAATGAAGTGAGAAAGCATAG-TTTTACA-------AAAGTTTGAAAAAA----TGGTTTTCATTAAAAGACCAACAATACGGTTTCACTGAAATGTG------ i aotNan1.NW_018494782v1 C 0 I 1 s otoGar3.GL873575 10987096 205 - 12073884 ACCAGAGGCAGAAGGGCAGGGAGAAGGAA-CTATGGGTGCAGTCATCTTCAT-GGAGTAGACAGAGCATATTATCTTGGCTTAGAAGTGTCCCATGGAAGTACTCCGATATTTT---------G-------AGAAAGGAGTGAAATAACAGAGCatat-ttta-tattttattaaaattcaaca----------ttttaaataaGAGATCAGCAATATAGATTCACTAAAATATG------ i otoGar3.GL873575 I 1063 I 27 s dasNov3.JH569188 643670 202 + 760995 ATATAAGGGAGAA-AGTGGAAGATGGGTGG--GCAAGTAGC-TGATCTTTTT-AG---AAGAAAT-CATA-TATCTTGGGTTAGAAGTATTTGGCATCATTAATTCCATACTCT---------G-------GATAAGAAGCGAAGTAATAAAACATTTCTTTC-TA-------AATTCTTGAAAACATTTCAGATTTATTATTAAAGGTAAAAAATAAAGTTTCACGATAATAGG-----C i dasNov3.JH569188 C 0 C 0 e canFam3.chr1 56219018 1281 + 122678785 I a score=505111.000000 s hg38.chr6_KB021644v2_alt 157214 58 + 185823 --------TTTTTAG-----------------------------------------------------------------------------AAAAGACTCGTTT-ATGTTTTTTATCTTTCTCAACCTGAAATCCAGCTCTGA s panTro5.chr6 173613987 58 + 175400573 --------TTTTTAG-----------------------------------------------------------------------------GAAAGACTCGTTT-ATGTTTTTTATCTTTCTCAACCTGAAATCCAGCTCTGA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171847277 58 + 173848474 --------TTTTTAG-----------------------------------------------------------------------------GAAAGACTCGTTT-ATGTTTTTTATCTTTCTCAACCTGAAATCCAGCTCTGA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11530374 58 - 12463322 --------TTTTTAG-----------------------------------------------------------------------------AAAAGACGTGTTT-ATGTTTTTTATCTTTCTCAACCTGAAATCCAGCTCTGA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156363195 58 + 157873769 --------TTTTTAG-----------------------------------------------------------------------------AAAAGACTTGTTT-ATGTTTTTTATCTTTCTCAACCTGAAATCCAGCTCTGA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170391347 57 + 172585720 --------TTTTTAG-----------------------------------------------------------------------------AAAAGACTTGTTT-ATGTTTTTTCTCTTT-TCAACCTGAAATCCAGCTCTGA i rheMac8.chr4 I 321 C 0 s macFas5.chr4 169134604 57 - 170955103 --------TTTTTAG-----------------------------------------------------------------------------AAAAGACTTGTTT-ATGTTTTTTCTCTTT-TCAACCTGAAATCCAGCTCTGA i macFas5.chr4 I 287 C 0 s macNem1.NW_012011000v1 8420955 57 + 10161646 --------TTTTTAG-----------------------------------------------------------------------------AAAAGACTTGTTT-ATGTTTTTTCTCTTT-TCAACCTGAAATCCAGCTCTGA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1451317 57 + 3144229 --------TTTTTAG-----------------------------------------------------------------------------AAAAGACTTGTTT-ATGTTTTTTCTCTTT-TCAACCTGAAATCCAGCTCTGA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96736624 57 + 98384682 --------TTTTTAG-----------------------------------------------------------------------------AAAAGACTTGTTT-ATGTTTTTTCTCTTT-TCAACCTGAAATCCAGCTCTGA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8298291 57 - 10857215 --------TTTTTAG-----------------------------------------------------------------------------AAAAGACTTGTTT-ATGTTTTTTCTCTTT-TCAACCTGAAATCCAGCTCTGA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15662593 53 - 23502949 --------TTTTTAG-----------------------------------------------------------------------------AAAAGAC----TT-ATGCTTTTTCTCTTT-TCAAACTGAAATCCAACTCTGA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169946057 58 + 171630274 --------TCTTTAC-----------------------------------------------------------------------------AAACTACTCGTTC-ATGCTTTTTCTCTTTCTCAACCTGAAATCCAGCTCTGC i calJac3.chr4 I 1 C 0 s saiBol1.JH378287 1346176 58 - 2905041 --------TTTTTAC-----------------------------------------------------------------------------AAACTACTTGTTT-ATGTTTTTTCTCTTTCTCAACCTGAAATCCAGCTCTGC i saiBol1.JH378287 I 1 C 0 s cebCap1.NW_016107695v1 1311382 56 - 2164891 --------TTTTTAC-----------------------------------------------------------------------------AAACTACTTGTTT-ATG--TTTTCTCTTTCTCAACCTGAAATCCAGCTCTGC i cebCap1.NW_016107695v1 I 1 C 0 s aotNan1.NW_018494782v1 1556632 58 - 1813869 --------TTTTTAC-----------------------------------------------------------------------------AATCTCCTTGTTT-ATGTTTTTTCTCTTTCTCAACCTGAAATCCAGCTCTGC i aotNan1.NW_018494782v1 I 1 C 0 s otoGar3.GL873575 10987328 132 - 12073884 --------tttttggctggggctgggtttgaactcactacctccggcatatggggccagtgccctacttctttgagccacaggtgccgccTCAAACTCCTTTTTTAATGTCTTTTTTCCT--TTGATCTGAAATCCA--CTTGA i otoGar3.GL873575 I 27 C 0 s dasNov3.JH569188 643872 63 + 760995 TCTTGCATCTTTTTT-----------------------------------------------------------------------------AAAACACATGCCT-ATGAATTATATTCTT---AGTCCGAAATTCAGGTTTAA i dasNov3.JH569188 C 0 I 513 e canFam3.chr1 56219018 1281 + 122678785 I a score=639548.000000 s hg38.chr6_KB021644v2_alt 157272 77 + 185823 TGTTTTATTGTTGCGGGTCCG-TGGAGATGAATCTCTGCTGGTCTTCCCTCATCGGCTTTCCTGACCTTGTGAGGGGA s panTro5.chr6 173614045 78 + 175400573 TGTTTTATTGTTGCGGGTCCGTTGGAGATGAATCTCGGCTCGTCTTCCCTCATTGGCTTTCCTGACCTTGTGAGGGGA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171847335 78 + 173848474 TGTTTTATTGTTGCGGGTCCGTTGGAGATGAATCTCTGCTCGTCTTCCCTCATTGGCTTTCCTGACCTTGTGAGGGGA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11530432 77 - 12463322 TGTTTTATTGTTGCGGGTCCT-TGGAGATGAATCTCTGCTCGTCTTCCCTCATTGGCTTTCCTGACCTTGTGAGGGGA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156363253 78 + 157873769 TGTTTTATTGTTGTGGGTGACGTGGAGATGAATCTCTGCTCGTCTTCCCTCATCGGCTTTCGTGACCTCGTGAGGGGA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170391404 73 + 172585720 TGTTTTATTATTGTGGG-----TGGAGATGAATCTCCGCTCGTCTTCCCTCATCGGCTTTCCTGACCTTGTGAAGGGA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169134661 73 - 170955103 TGTTTTATTATTGTGGG-----TGGAGATGAATCTCCGCTCGTCTTCCCTCATCGGCTTTCCTGACCTTGTGAAGGGA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8421012 73 + 10161646 TGTTTTATTATTGTGGG-----TGGAGATGAATCTCCGCTCGTCTTCCCTCATCGGCTTTCCTGACCTTGTGAAGGGA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1451374 73 + 3144229 TGTTTTATTATTGTGGG-----TGGAGATGAATCTCCGCTCGTCTTCCCTCATCGGCTTTCCTGACCTTGTGAAGGGA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96736681 73 + 98384682 TGTTTTATTACTGTGGG-----TGGAGATGAATCTCCGCTCGTCTTCCCTCATCGGCTGTCCTGACCTTGTGAAGGAG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8298348 73 - 10857215 TGTTTTATTATTGTGGG-----TGGAGATGAATCTCCGCTCGTCTTCCCTCATCGGCTTTCCTGACCTTGTGAAGGGA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15662646 73 - 23502949 TGTTTTATTATTGTGGG-----TGGAGATGAATCTCCGCTTGTCTTCCCTCATCGACTTTCCTGACCTTGTGAAGGGA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169946115 78 + 171630274 TGTGTTACTGTTGTGGGTGGCGTGGAGAGGAATCTCTGCCTGTCTCCCCTTACCCGCTTTCCTGACCTCAAGAGGGGA i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1346234 78 - 2905041 TGTGTTACTCTTGTGGGCAGCATGGAGATGAGTCTCTGCTTCTCTCCCCTTACCCACTTTCCTGACCTCATGAGGGGA i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1311438 78 - 2164891 TGTGTTGCTGTTGTGGGCTGTGTGGAGATGAATCTCTGCTTGTCTCCCCTTACCCGCTTTCCTGACCTTGTGAGGGGA i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1556690 77 - 1813869 TGTGTCACTGTTGTGGGCGGCGTGGAGATGAGTCTCTGCTCGTCTCCCCTTCCCCGCTTTCCTGACCTTTTGA-GGGA i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10987460 52 - 12073884 GAGCTCAGTGTTCTGGG-----CAGAGG-GAGAATGCGCCAGTCTGTC--------------------TGTGAGGGGA i otoGar3.GL873575 C 0 C 0 e dasNov3.JH569188 643935 513 + 760995 I e canFam3.chr1 56219018 1281 + 122678785 I a score=1080781.000000 s hg38.chr6_KB021644v2_alt 157349 123 + 185823 AGACCAGGGTGCTTGACACAAAAGACT--TCTTTTCACA-GG-CCCCTCAT----CCGGAGTCGGGG-CTGCTCTCCT-TTCATGGTGGGCACAGGTGGTCTCGTGTTTACATCTGAGCCCTGCT-------------GTTGGCGT s panTro5.chr6 173614123 123 + 175400573 AGACCAGGGTGCTTGACACAAAAGACT--TCTTTTCACA-GG-CCCCTCAT----CCGGGGGCGGGG-CTGCTCTCCT-TTCATGGTGGGCACAGGTGGTCTCGTGTTTACATCTGAGCCCTGCT-------------GTTGGCGT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171847413 123 + 173848474 AGACCAGGGTGCTTGACACAAAAGACT--TCTTTTCACA-GG-CCCCTCAT----CCGGGGGCGGGG-CTGCTCTCCT-TTCATGGTGGGCACAGGTGGTCTCGTGTTTACATCTGAGCCCTGCT-------------GTTGGCGT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11530509 123 - 12463322 AGACCAGGGTGCTTGACACAAAAGACT--TCTTTTCACA-GG-CCCCTCAT----CCGGGGGCGGGG-CTGCTCTCCT-TTCATGGTGGGCACAGGTGGTCTCGTGTTTACATCTGAGCCCTGCT-------------GTTGGCGT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156363331 123 + 157873769 AGACTGGGGTCCTTGACACAAAAGACT--TCTTTTCACA-GG-CCCCTCAT----CCAGGGGTGGGG-CTGCTCACCT-CTCATGGTGGGCACAGGTGGTCTCGTGTTTACATCTGAGCCCTGCT-------------GTTGGTGT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170391477 123 + 172585720 AGACCGGGGTCCCTGACATAAAAGATT--TCTTTTCACA-GA-CCCGTCAT----CCAGGGGCGGTG-CTGCTCTCCT-CTCACGGTAGGCACAGGTGGTCTCGTATTTACATCTGAGCCTTGCT-------------GTTGGCGT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169134734 123 - 170955103 AGACCGGGGTCCCTGACATAAAAGACT--TCTTTTCACA-GA-CCCGTCAT----CCAGGGGCGGTG-CTGCTCTCCT-CTCATGGTAGGCACAGGTGGTCTCGTATTTACATCTGAGCCTTGCT-------------GTTGGCGT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8421085 123 + 10161646 AGACCGGGGTCCCTGACATAAAAGACT--TCTTTTCACA-GA-CCCGTCAT----CCAGGGGCGGTG-CTGCTCTCCT-CTCATGGTAGGCACAGGTGGTCTCGTATTTACATCTGAGCCTTGCT-------------GTTGGCGT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1451447 123 + 3144229 AGACCGGGGTCCCTGACACAAAAGACT--TCTTTTCACA-GA-CCCCTCAT----CCAGGGGCGGTG-CTGCTCTCCT-CTCATGGTGGGCACAGGTGGTCTCGTATTTACATCTGAGCCTTGCT-------------GTTGGCGT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96736754 124 + 98384682 AGACTGGGGTCCCTGACACAAAAGACT--TCTTTTCACA-GACCCCCTCAT----CCAGGGGCGGGG-CTGCTCTCCT-CTCATGGTGGGCACAGGTGGTCTCGTATTTACATCTGAGCCTTGCT-------------GTTGGCGT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8298421 123 - 10857215 AGACCGGGGTCCCTGACACAAAAGACT--TCTTTTCACA-GA-CCCCTCAT----CCAGGGGCGGTG-CTGCTCTCCT-CTCATGGTGGGCACAGGTGGTCTCGTATTTACATCTGAGCCTTGCT-------------GTTGGCGT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15662719 123 - 23502949 AGACCAGGGTCCCTGACACAAAAGACT--TCTTTCCACA-GA-TCCCTCAT----CCAGGGGCGGGG-CTGCTCTCCT-CTCATGGTGGGCACAGGTGGTCTCGTATTTACATCTGAGCCTTGCT-------------GTTGGCGT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169946193 121 + 171630274 AGACTGA-GTCCTTG-AACAAAAGGGT--TCTTTTCACC-GA-ACGCTCAC----CCAGGG-TGGGGCCTGCTCTCCT-GTGACTGTGCGCAGAGGGGGTCTTGCGTTTACATCCAAGCCCTGCC-------------ATTGGCGT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1346312 113 - 2905041 AGACAGA---------CACAGAAGGCT--TCTTTTCACC-AG-ACCCTCAC----CCGGGG-CGGGG-CTGCTCTCCT-GTGACTGTGGGCAGAGGTGGTCTTGTGTTTACATCCAAACCCTGCT-------------GTTGGCAT i saiBol1.JH378287 C 0 I 23 s cebCap1.NW_016107695v1 1311516 121 - 2164891 AGACTGA-GTCCTTGATGCAAAAGGGT--TCTTTTCACC-GA-ACGCTCAC----CCAGGG-CGGGG-CTGCTCTCCT-GTGACTGTGGGCAGAGGTGGTCTTGTGTTTACATCCAAGCCCTGCT-------------GTTGGTGT i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1556767 121 - 1813869 AGACTGA-GTCCTTGACACAAAAGACT--TCTTTTCACC-GA-ACGCTCAC----CCGGGG-CGGGG-CTGCTCTCCT-GTGACTGTGGGCAGAGGTGGTCTTGTGTTTCCATCCAAGCCCTGCT-------------GTTGGAGT i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10987512 118 - 12073884 AGCCCAGAGTCC-----------------TCTTCTCACA-GT-GCCCCCATCACACCAGGG-----G-TCCCCCTTAC-TGCATGG--AGCTGCGGTGGTCTCCTGCCCACACAGGAGACAGGCTCCCTCCTTCCCAGAGTGGTGC i otoGar3.GL873575 C 0 C 0 s dasNov3.JH569188 644448 121 + 760995 AGACTAGAGTTCTTGATGCAAAAAATCTATCTTGTGACATTG-CCTTTAAT----TC-----TAGTG-TTGGTTTCCTATTCATCACTGGCA-AATTGAGCTTGTATTTACATACAATCTGTACT-------------TTTAGCAC i dasNov3.JH569188 I 513 C 0 e canFam3.chr1 56219018 1281 + 122678785 I a score=1663142.000000 s hg38.chr6_KB021644v2_alt 157472 201 + 185823 TCATGCCCC----------------------CAGAGGAGTCCTGCCCCAGAATCAGACTCACTGCATCTTCCTTTTTGAAGA------CAAAGTTGTATTAT--GTGATTTCCTTTTGCTTTGCACAAAGCAAGATGC--TCCCACCGAGGCTGGGAGCCAGT---TCTGTATCTTTCAAGTCA-------CAAGC-GATCCTTGACCTCAGGGTCTAAATGACT-CAGGGAGGCCCCGAGAGAC s panTro5.chr6 173614246 201 + 175400573 TCATGCCCC----------------------CAGAGGAGTCCTGCCCCAGAATCAGACTCACTGCATCTTCCTTTTTGAAGA------CAAAGTTGTATTAT--GTGATTTCCTTTTGCTTTGCACAAAGCAAGATGC--TCCCACCGAGGCTGGGAGCCAGT---TCTGTATCTTTCAAGTCA-------CAAGC-GATCCTTGACCTCAGCGTCTAAATGACT-CAGGGAGGCCCCGAGAGAC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171847536 201 + 173848474 TCATGCCCC----------------------CAGAGGAGTCCTGCCCCAGAATCAGACTCACTGCATCTTCCTTTTTGAAGA------CAAAGTTGTATTAT--GTGATTTCCTTTTGCTTTGCACAAAGCAAGATGC--TCCCACCGAGGCTGGGAGCCAGT---TCTGTATCTTTCAAGTCA-------CAAGC-GATCCTTGACCTCAGTGTCTAAATGACT-CAGGGAGGCCCCGAGAGAC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11530632 204 - 12463322 TCATGCCCC----------------------CAGAGGAGTCCTGCCCCAGAATCAGACTCACTGCATCTTCCTTTTTGAAGA------CAAAGTTGTATTAT--GTGATTTCCTTTTGCTTTGCACAAAGCAAGATGCTGTCCCACCGAGGCTGGGAGCCAGT---TCTGCATCTTTCAAGTCA-------CAAGCTGATCCTTGACCTCAGGGTCTAAATGACT-CAGGGAGGCCCCGAGAGAC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156363454 204 + 157873769 TCATGCCCC----------------------CAGAGGAGTCCTGCCCTGGAATCAGACTCGCTCTGTCTTCCTTTTTGAAGA------CAAAGTTGTATTAT--GTGATTTCCTCTTGCTTTGCACAAATCAAGATGCTGTCCCACCGAGGCTGGGAGCTAGT---TCTGCATCTTTCAAGTTG-------CAAGCTGATCCTTGACCTCAGAGTCTAAATGACT-CAGCGAGGCCCCGAGAGAC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170391600 198 + 172585720 TCACGCCCC----------------------CAGAGGAGTCCCGCCCCGGAATCAGGCTCACTCCATCTTCCTTTTTGAAGA------CAAAGTCATATTAT--GTGATTTCCTTTTGCTTTGCACAAATCAAGATGCCGTCCCACCAAGGCTGGGAGCTAGT---TCTGCGTCTTTCAAGTCA-------CAAGCTGATCCTTGACCTCAGG------AGGACT-CAGGGAGGCCCCGAGAGAC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169134857 198 - 170955103 TCACGCCCC----------------------CAGAGGAGTCCCGCCCCGGAATCAGGCTCACTCCATCTTCCTTTTTGAAGA------CAAAGTCATATTAT--GTGATTTCCTTTTGCTTTGCACAAATCAAGATGCCGTCCCACCAAGGCTGGGAGCTAGT---TCTGCGTCTTTCAAGTCA-------CAAGCTGATCCTTGACCTCAGG------AGGACT-CAGGGAGGCCCCGAGAGAC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8421208 198 + 10161646 TCACGCCCC----------------------CAGAGGAGTCCCGCCCCGGAATCAGGCTCACTCCATCTTCCTTTCTGAAGA------CAAAGTCATATTAT--GTGATTTCCTTTTGCTTTGCACAAATCAAGATGCCGTCCCACCAAGGCTGGGAGCTAGT---TCTGCGTCTTTCAAGTCA-------CAAGCTGATCCTTGACCTCAGG------AGGACT-CAGGGAGGCCCCGAGAGAC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1451570 198 + 3144229 TCACGCCCC----------------------CAGAGGAGTCCCGCCCCGGAATCAGGCTCACTCCATCTTCCTTTTTGAAGA------CAAAGTCATATTAT--GTGATTTCCTTTTGCTTTGCACAAATCAAGATGCCGTCCCACCAAGGCTGGGAGCTAGT---TCTGCGTCTTTCAAGTCA-------CAAGCTGATCCTTGACCTCAGG------AGGACT-CAGGGAGGCCTGGAGAGAC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96736878 198 + 98384682 TCACGCCCC----------------------CAGAGGAGTCCCGCCCCGGAATCAGACTCACTCCATCTTCCTTTTTGAAGA------CAAAGTCATATTAT--GTGATTTCCTTTTGCTTTGCACAAATCAAGATGCCGTCCCACCAAGGCTGGGAGCTAGT---TCTGCGTCTTTTAAGTCA-------CAAGCTGATCCTTGACCTCAGG------AGGACT-CAGGGAGGCCCCGAGAGAC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8298544 198 - 10857215 TCACGCCCC----------------------CAGAGGAGTCCCGCCCCGGAATCAGGCTCACTCCATCTTCCTTTTTGAAGA------CAAAGTCATATTAT--GTGATTTCCTTTTGCTTTACACAAATCAAGATGCCGTCCCACCAAGGCTGGGAGCTAGT---TCTGCGTCTTTCAAGTCA-------CAAGCTGATCCCTGACCTCAGG------AGGACT-CAGGGAGGCCCCGAGAGAC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15662842 198 - 23502949 TCACATCCC----------------------CAGAGGAGTCCTGCCCTGGAATCAGACTCACTCCATCTTCCTTTTTGAAGA------CAAAGTCATATTAT--GTGATTTCCTTTTGCTTCGCACAAATCAAGATGCCGTCCCACCAAGGCTGGGAGCTAGT---TCTGCGTCTTTCAAGTCA-------CAAGCTGATCCTTGACCTCAGG------AGGACT-CAGGGAGGCCCCGAGAGAC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169946314 211 + 171630274 CCACTCCCC----------------------CAGAGGAATCCTGCCCCAGAATCAGACTCACTCCATCTTCCTTTTTGAAGA------CAAAGTCACGTTAT--GTGATTTCCTTTTGCTTTGCACAAATCAAGATGCTGCCCCATTGTTGCTGGGAGCCAGT---TCTGATTCTTTCAAGTCACAAGTCTCAAGCTGAGCCTTGACCTCAGGCTCCAAATGACT-CAGAGAGGCCCCCAGAGAC i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1311637 215 - 2164891 TCACTCCCCT-----------------GAATCAGATGAGTCCTGGCCCAGAATCAGACTCACTCCATCTTCCTTTTTGAAGA------CAAAGTCATATTAT--GGGATTTCCTTTTGCTTTGC-CAAATCAAGATGCTGCCCCATTGTGGCTGGGAGCTAGT---TCTGATTCTTTCAAGTCACAAGTCTCAAGCTGAGCCTTGACCTCAGGCTCCAAATGACT-CAGAGAGGCCCCCAGAGAC i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1556888 233 - 1813869 TCACTCCTCCAGAGGAGTCCTGCCCCAGAATCAGACGAGTCCTGGCCCAGAATCAGACTCACTCCATCTTCCTTTCTGAAGA------CAAAGTCAAATTAT--GTGATTTCCTTTTGCTTTGCACAAATCAAGATGCTGCCCCATTGTGGCTGGGAGCTAGT---TCTGATTCTTTCAAGTCACAAGTCTCAAGCTGAGCCTTGACCTCAAACTCCAAATGACT-CAGAGAGGCCCCTAGAGAC i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10987630 190 - 12073884 CCACTCTCC----------------------TGAGGGCCTCCTTCCCAGAGCT---GCTCACTCTTATCTCTCTGCAGCTGG------CACAGAGATCTCATCACCAATTCTCT----CTTTCCATGAGGCTGGTTACCAGACCACCGAGG-GGGCAGCTGTC---TCTTGTTTCCTGAGGTCA-------TTCCTGAGTCCTTGGTGTGGGGCTCCAAACTTCTGCTGGGAG---------AAC i otoGar3.GL873575 C 0 C 0 s dasNov3.JH569188 644569 212 + 760995 TCCCTCATC----------------------TAGAGGAAACTTCCTCTAGAATCAGACTTATTCCTTTCTATTTTTATAGAATATCACTAAAACCACACTAT--TAATTTCTCTTTTGTTTCCCAAAAATCCAGAACCTATACCTTTGTTGTTGAACAGTGATCTCTTTGCTTCTTTCAAGTTA-------GTATCAGGTCATTTATATTAGACTCTT-AACTCT-AAGTGAAACCTATAGATAC i dasNov3.JH569188 C 0 I 34 e saiBol1.JH378287 1346425 23 - 2905041 I e canFam3.chr1 56219018 1281 + 122678785 I a score=357313.000000 s hg38.chr6_KB021644v2_alt 157673 45 + 185823 CAAGGTCCTGTCCAAGCCCACAGAGATGTT------------GCTCAGGGAGCACTT s panTro5.chr6 173614447 45 + 175400573 CAAGGTCCTGTCCAAGCCCACAGAGATGTT------------GCTCAGGGAGCACTT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171847737 45 + 173848474 CAAGGTCCTGTCCAAGCCCACAGAGATGTT------------GCTCAGGGAGCACTT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11530836 44 - 12463322 CAAGGT-CTGTCCAAGCCCACAGAGATGTT------------GCTCAGGGAGCACTT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156363658 45 + 157873769 CAAGGTCCTGTCCAAGCCCACAGAGATGTT------------GCTCAGGGAGCACTT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170391798 45 + 172585720 CGAGGTCCTGTTCAAGCCCACGGAGATGGT------------GCTCAGGGAGCACTT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169135055 45 - 170955103 CGAGGTCCTGTTCAAGCCCACGGAGATGGT------------GCTCAGGGAGCACTT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8421406 45 + 10161646 CGAGGTCCTGTTCAAGCCCACGGAGATGGT------------GCTCAGGGAGCACTT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1451768 45 + 3144229 CGAGGTCCTGTTCAAGCCCATGGAGATGGT------------GCTCAGGGAGCACTT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96737076 45 + 98384682 CGAGGTCCTGTTCAAGCCCAAGGAGATGGT------------GCTCAGGGAGCACTT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8298742 45 - 10857215 CGAGGTCCTGTTCAAGCCCACGGAGATGGT------------GCTCAGGGAGCACTT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15663040 45 - 23502949 CAAGGTTCCGTTCAAGCCCACGGAGATGGT------------GCTCAGGGAGCACTT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169946525 44 + 171630274 TAAGGTCCTATCCAAG-CCACAGAGATGGT------------GCTCAGGGACCACAC i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1311852 44 - 2164891 TAAGGTCCTGTCCAAG-CCACAGAGATGGT------------GCTCAGGGACCACAC i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1557121 44 - 1813869 TAAGGTCCTGTCAAAG-CCACAGAGATGGT------------GCTCAGGGACCACAC i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10987820 57 - 12073884 AAGGGTCCTGTCCAACAGGAAAGACAGAGTGTGGGGCATCTGGCTCTGGGGTCGGGA i otoGar3.GL873575 C 0 C 0 e saiBol1.JH378287 1346425 23 - 2905041 I e dasNov3.JH569188 644781 34 + 760995 I e canFam3.chr1 56219018 1281 + 122678785 I a score=295857.000000 s hg38.chr6_KB021644v2_alt 157718 43 + 185823 TTCACTTGAAAAGGCAGCCACACC-AGTCT-CTCCCCATCTGAGG- s panTro5.chr6 173614492 43 + 175400573 TTCACTTGAAAAGGCAGCCACGCC-AGTCT-CTCCCCGTCTGAGG- i panTro5.chr6 C 0 C 0 s panPan2.chr6 171847782 43 + 173848474 TTCACTTGAAAAGGCAGCCACGCC-AGTCT-CTCCCCGTCTGAGG- i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11530880 43 - 12463322 TTCACTTGAAAAGGCAGCCACACC-AGTCT-CTCCCCGTCTGAGG- i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156363703 42 + 157873769 TCC-CTTGAAAAGGCAGCCACGCC-AGTCT-CTCCCCATCTGAGG- i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170391843 43 + 172585720 TTCACGTGAAAAGGAGGCCACATC-AGCCT-CTCCCCATCTGAGG- i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169135100 43 - 170955103 TTCATGTGAAAAGGAGGCCACATC-AGTCT-CTCCCCATCTGAGG- i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8421451 43 + 10161646 TTCATGTGAAAAGGAGGCCACATC-AGTCT-CTCCCCATCTGAGG- i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1451813 43 + 3144229 TTCATGTGAAAAGGAGGCCACGTC-AGTCT-CTCCCCATCTGAGG- i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96737121 43 + 98384682 TTCATGTGAAAAGGAGGCCACATC-AGTCT-CTCCCCATCTGAGG- i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8298787 43 - 10857215 TTCATGTGAAAAGGAGGCCACATC-AGTCT-CTCCCCATCTGAGG- i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15663085 43 - 23502949 TTCATGGGAAAAGGAGGCCACATC-AGTCT-CTCCCCATCTGAGG- i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169946569 30 + 171630274 TT-------------GGCCACGCC-AGTCT-CTCCCCGTCTGAGG- i calJac3.chr4 C 0 I 1 s cebCap1.NW_016107695v1 1311896 30 - 2164891 TT-------------GGCCACGCC-AGTCT-CTCCCCGTCTGAGG- i cebCap1.NW_016107695v1 C 0 I 1 s aotNan1.NW_018494782v1 1557165 30 - 1813869 TT-------------GGCCACGCC-AGTCT-CTCCCCGTCTGAGG- i aotNan1.NW_018494782v1 C 0 I 124 s otoGar3.GL873575 10987877 44 - 12073884 TGCATGTGAGGAGGCCACTGCTCC-AAAGTGCTTCCCATGGAAGG- i otoGar3.GL873575 C 0 I 1 s dasNov3.JH569188 644815 45 + 760995 TTTATTTGAGAAAACTATCATTCCAAATAT-CGATTCAGTTTAAGA i dasNov3.JH569188 I 34 C 0 e saiBol1.JH378287 1346425 23 - 2905041 I e canFam3.chr1 56219018 1281 + 122678785 I a score=-6158.000000 s hg38.chr6_KB021644v2_alt 157761 2 + 185823 AG s panTro5.chr6 173614535 2 + 175400573 AA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171847825 2 + 173848474 AA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11530923 2 - 12463322 AG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156363745 2 + 157873769 AA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170391886 2 + 172585720 AA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169135143 2 - 170955103 AA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8421494 2 + 10161646 AA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1451856 2 + 3144229 AA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96737164 2 + 98384682 AA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8298830 2 - 10857215 AA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15663128 2 - 23502949 AA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169946600 1 + 171630274 G- i calJac3.chr4 I 1 I 26 s cebCap1.NW_016107695v1 1311927 1 - 2164891 G- i cebCap1.NW_016107695v1 I 1 I 130 s otoGar3.GL873575 10987922 1 - 12073884 G- i otoGar3.GL873575 I 1 C 0 s dasNov3.JH569188 644860 2 + 760995 AA i dasNov3.JH569188 C 0 C 0 e saiBol1.JH378287 1346425 23 - 2905041 I e aotNan1.NW_018494782v1 1557195 124 - 1813869 I e canFam3.chr1 56219018 1281 + 122678785 I a score=368138.000000 s hg38.chr6_KB021644v2_alt 157763 79 + 185823 CCCCC-G---------ACCAGGCCGG------------------------------GCCCCGTGCTCTTTTCCTGTCAATTAGAT-CACCTTTATTTGG-CCC---CTGCTGCACTGAATCATG s panTro5.chr6 173614537 79 + 175400573 CCCCC-G---------ACCAGGCTGG------------------------------GCCCCGTGCTCTTTTCCTGTCAATTACAT-CACCTTTATTTGG-CCC---CTGCTGCATTGAATCATG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171847827 79 + 173848474 CCCCC-G---------ACCAGGCTGG------------------------------GCCCCGTGCTCTTTTCCTGTCAATTACAT-CACCTTTATTTGG-CCC---CTGCTGCATTGAATCATG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11530925 79 - 12463322 CCCCC-G---------ACCAGGCCGG------------------------------GCCCCGTGCTCTTTTCCTGTCAATTACAT-CACCTTTCTTTGG-CCC---CTGCTGCACTGAATCATG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156363747 80 + 157873769 CCCCTGG---------ACCAGGCCCG------------------------------GCCCCAGGTTCTTTTCCTGTCAATTTCAT-CACCTTAATTTGG-CCC---CTGCTGCACTAAATCATG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170391888 109 + 172585720 ACCCC-A---------AGCAAGCGAGCGAGCGGAGACTTCTCCCGGGACCCGGTCGGCCCTGGGCTCCTCTCCTGTCAATTACAT-CACCTTTATTTAG-CCC---GTGCTGCACTGAGTCATT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169135145 109 - 170955103 ACCCC-A---------AGCAAGCGAGCGAGCGGAGACTTCTCCCGGGACCCGGTCGGCCCTGGGCTCCTCTCCTGTCAATTACAT-CACCTTTATTTAG-CCC---GTGCTGCACTGAGTCATT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8421496 109 + 10161646 ACCCC-A---------AGCAAGCGAGCGATGGGAGACTTCTCCCGGGACCCGGTCGGCCCTGGGCTCCTCTCCTGTCAATTACAT-CACCTTTATTTAG-CCC---GTGCTGCACTGAGTCATT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1451858 109 + 3144229 ACCCC-A---------AGCAAGCGAGCGAGCGGAGACTTCTCCCGGGACCCAGTCGGCCCTGGGCTCCTCTCCTGTCAATTATAT-CACCTTTGTTTAG-CTC---GTGCTGCGCTGAGTCATT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96737166 109 + 98384682 ACCCC-A---------AGCAACCCAGCGAGTGGAGACTTCTCCCTGGACCCCCTCGGCTCTGGGCTCCTCTCCTGTCAATTACAT-CACCTTTTTTTAG-CCC---CTGCTGCACTGAGTCATT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8298832 109 - 10857215 ACCCC-A---------AGCAAGCGAGCGAGCGGAGACTTCTCCCGGGACCCGGTCCGCCCTGGGCTCCTCTCCTGTCAATTACAT-CACCTTTATTTAG-CCC---GTGCTGCACTGAGTCATT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15663130 104 - 23502949 CCCCC-A---------AGCAAGCCAGC----GGAGACTTCTCCCAGGACGGGGTC-GCCCCAGGCTCTTCTCCTGTCAATTACAT-CACCTTTATTTGG-CCC---CTGCTGCACTGAGTCATT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169946627 81 + 171630274 CCCTG-G---------ACCAGGCGGG------------------------------GCTC-AGGCTCTTTTCCTGTCTATTGCAA-CATCTTCGTTCCG-CCCCCACTGCTGCCCAGGACCATT i calJac3.chr4 I 26 C 0 s otoGar3.GL873575 10987923 87 - 12073884 --CCC-G---------AGTTGGGATGAGAGCCCAGGC-------------------GTCCCGGCTGCATCCCGTGCACCCTGCGT--GTCTGCACTCGG-GTC---CTCCCGCAGGTGACCGTG i otoGar3.GL873575 C 0 I 323 s dasNov3.JH569188 644862 91 + 760995 TCACT-GAGTTGGAACAGTAGGCCAGG-----------------------------TCTTCTGACTTCTGATCTATTTATTCCATTCATTTTTACTGGATCTC---CCAATATAATTTATCTTT i dasNov3.JH569188 C 0 C 0 e saiBol1.JH378287 1346425 23 - 2905041 I e aotNan1.NW_018494782v1 1557195 124 - 1813869 I e cebCap1.NW_016107695v1 1311928 130 - 2164891 I e canFam3.chr1 56219018 1281 + 122678785 I a score=167592.000000 s hg38.chr6_KB021644v2_alt 157842 26 + 185823 -TCTTCTGGAACATCTGCAATGGATAC- s panTro5.chr6 173614616 26 + 175400573 -TCTTCTGGAACATCTGCAATGGATAC- i panTro5.chr6 C 0 C 0 s panPan2.chr6 171847906 26 + 173848474 -TCTTCTGGAACATCTGCAATGGATAC- i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11531004 26 - 12463322 -TCTTCTGGAACATCTGCAATGGATAC- i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156363827 26 + 157873769 -TCTTCTGGAACATCTGCAATGGATAC- i nomLeu3.chr3 C 0 I 1 s rheMac8.chr4 170391997 26 + 172585720 -TCTTCTGGAACAACTACAATGGATAC- i rheMac8.chr4 C 0 I 1 s macFas5.chr4 169135254 26 - 170955103 -TCTTCTGGAACAACTACAATGGATAC- i macFas5.chr4 C 0 I 1 s macNem1.NW_012011000v1 8421605 26 + 10161646 -TCTTCTGGAACAACTACAATGGATAC- i macNem1.NW_012011000v1 C 0 I 1 s cerAty1.NW_012002071v1 1451967 26 + 3144229 -TCTTCTGGAACAACTACAATGGATAC- i cerAty1.NW_012002071v1 C 0 I 1 s chlSab2.chr13 96737275 26 + 98384682 -TTTTCTGGAACAACTACAATGGATAC- i chlSab2.chr13 C 0 I 1 s manLeu1.NW_012106474v1 8298941 26 - 10857215 -TCTTCTGGAACAACTACAATGGATAC- i manLeu1.NW_012106474v1 C 0 I 1 s colAng1.NW_012114488v1 15663234 26 - 23502949 -TCTTCTGGAACAACTACAATGGATAC- i colAng1.NW_012114488v1 C 0 I 1 s calJac3.chr4 169946708 26 + 171630274 -TCCTCTGGAATGTCTCCGATGGGTCC- i calJac3.chr4 C 0 I 1 s otoGar3.GL873575 10988333 24 - 12073884 -TCTTCC--CACCCCTGCCAGGTGCAC- i otoGar3.GL873575 I 323 C 0 s dasNov3.JH569188 644953 28 + 760995 TCCTTTTAGAGTGTCTGTAGTGTACAGT i dasNov3.JH569188 C 0 C 0 e saiBol1.JH378287 1346425 23 - 2905041 I e aotNan1.NW_018494782v1 1557195 124 - 1813869 I e cebCap1.NW_016107695v1 1311928 130 - 2164891 I e canFam3.chr1 56219018 1281 + 122678785 I a score=16038.000000 s hg38.chr6_KB021644v2_alt 157868 2 + 185823 CT s panTro5.chr6 173614642 2 + 175400573 CT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171847932 2 + 173848474 CT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11531030 2 - 12463322 CT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156363854 2 + 157873769 TT i nomLeu3.chr3 I 1 C 0 s rheMac8.chr4 170392024 2 + 172585720 TT i rheMac8.chr4 I 1 C 0 s macFas5.chr4 169135281 2 - 170955103 TT i macFas5.chr4 I 1 C 0 s macNem1.NW_012011000v1 8421632 2 + 10161646 TT i macNem1.NW_012011000v1 I 1 C 0 s cerAty1.NW_012002071v1 1451994 2 + 3144229 TT i cerAty1.NW_012002071v1 I 1 C 0 s chlSab2.chr13 96737302 2 + 98384682 TT i chlSab2.chr13 I 1 C 0 s manLeu1.NW_012106474v1 8298968 2 - 10857215 TT i manLeu1.NW_012106474v1 I 1 C 0 s colAng1.NW_012114488v1 15663261 2 - 23502949 TT i colAng1.NW_012114488v1 I 1 C 0 s calJac3.chr4 169946735 2 + 171630274 TT i calJac3.chr4 I 1 C 0 s cebCap1.NW_016107695v1 1312058 2 - 2164891 TT i cebCap1.NW_016107695v1 I 130 C 0 s otoGar3.GL873575 10988357 2 - 12073884 TT i otoGar3.GL873575 C 0 C 0 s dasNov3.JH569188 644981 2 + 760995 TT i dasNov3.JH569188 C 0 C 0 e saiBol1.JH378287 1346425 23 - 2905041 I e aotNan1.NW_018494782v1 1557195 124 - 1813869 I e canFam3.chr1 56219018 1281 + 122678785 I a score=208103.000000 s hg38.chr6_KB021644v2_alt 157870 21 + 185823 GTATCTTGTACTTAAGCACAG s panTro5.chr6 173614644 21 + 175400573 GTATCTTGTACCTAAGCACAG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171847934 21 + 173848474 GTATCTTGTACCTAAGCACAG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11531032 21 - 12463322 GTATCTTGTACCTAAGCACAG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156363856 21 + 157873769 GTATCTTGTACCTAAGCACAG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170392026 21 + 172585720 GTATCTTGTACCTAAGCACAG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169135283 21 - 170955103 GTATCTTGTACCTAAGCACAG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8421634 21 + 10161646 GTATCTTGTACCTAAGCACAG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1451996 21 + 3144229 GTATCTTGTACCTAAGCACAG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96737304 21 + 98384682 GTATCTTGTACCTAAGCACAG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8298970 21 - 10857215 GTATCTTGTACCTAAGCACAG i manLeu1.NW_012106474v1 C 0 T 11361 s colAng1.NW_012114488v1 15663263 21 - 23502949 GTATCTTGTACCTAAGCACAG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169946737 21 + 171630274 CTATTCTGCACCTGAGCACAG i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1312060 21 - 2164891 CTATCCTGCACCTGAGCACAG i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1557319 21 - 1813869 GTATCCTGCACCTGAGCACAG i aotNan1.NW_018494782v1 I 124 C 0 s otoGar3.GL873575 10988359 21 - 12073884 TGCTCTTAGGGTTCAGCACAG i otoGar3.GL873575 C 0 C 0 s dasNov3.JH569188 644983 21 + 760995 GTATCTTACAATTAAACACAA i dasNov3.JH569188 C 0 C 0 e saiBol1.JH378287 1346425 23 - 2905041 I e canFam3.chr1 56219018 1281 + 122678785 I a score=401911.000000 s hg38.chr6_KB021644v2_alt 157891 62 + 185823 -CCTCAAACATGTTCTCACTGGGTTTGCTGCCATTTCCTTCATCTCAC----------TTTTT-TTTTTTTTTT s panTro5.chr6 173614665 61 + 175400573 -CCTCAAACATGTTCTCACTGGGTTTGCTGCCATTTCCTTCATCTCAC-----------TTTT-TTTTTTTTTT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171847955 59 + 173848474 -CCTCAAACATGTTCTCACTGGGTTTGCTGCCATTTCCTTCATCTCAC-------------TT-TTTTTTTTTC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11531053 60 - 12463322 -CCTCAAACATGTTCTCACTGGGTTTGCTGCCATTTCCTTCATCTCAC------------TTT-TTTTTTTTTT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156363877 62 + 157873769 -CCTCAAACATGTTCTCACT-GGTTTGCTCCCATTTCCTTCATCTCAC--T-------TTTTT-TTTTTTCTGT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170392047 70 + 172585720 -CCTCAAACATGTTCTCATTGGGTTTGGGCCCATGTCCTTCAtttagc--tttttttgttttg-ttttgttttC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169135304 67 - 170955103 -CCTCAAACATGTTCTCATTGGGTTTGGGCCCATGTCCTTCATTTAGC--ttt---ttttttt-tttttttttC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8421655 70 + 10161646 -CCTCAAACATGTTCTCATTGGGTTTGGGCCCATGTCCTTCATTTAGC--TTTTTGTTTGTTT-GTTTGTTTTC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1452017 65 + 3144229 -CCTCAAACATGTTCTCATTGGGTTTGGGCCCATGTCCTTCATTTAGC--ttt-----ttttt-tttttttttC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96737325 68 + 98384682 -CCTCAAACATGTTCTCATCGGGTTTGGGTCCATTTCCTTCATTTAGCttttt----tttttt-tttttttttC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8287630 66 - 10857215 -CCTCAAACATGTTCTCATTGGGTTTGGGCCCATGTCCTTCATTTAGC--ttt----tttttt-tttttttttC i manLeu1.NW_012106474v1 T 11361 C 0 s colAng1.NW_012114488v1 15663284 65 - 23502949 -CCTCAAACATGTTCTCATTGGGTTTGGGCCCATTTCCTTCATTTAGC--ttt-----ttttt-tttttttttC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169946758 60 + 171630274 -CCTCAAACAGGTTCTCATAGGGTTTGCTCTAATTTCCTTCATCTAGC-------------TATTTTTTTCTTT i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1312081 59 - 2164891 -CCTCAAACAGGTTCTCATCGGGTTTGCTCTAATTTCCTTCATCTAGC-------------TA-TTTTTTCTTT i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1557340 58 - 1813869 -CCTCAAACAGGTTCTCATCGGATTTGGTCTAATTTCCTTC-TCTAGC-------------TA-TTTTTTCTTT i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10988380 60 - 12073884 -GCTCAGACGCACCGTCATTGGATCTTCTTCT-CTTCCTTCATCTAAT----------TTGTT-TTTCTTTTT- i otoGar3.GL873575 C 0 C 0 s dasNov3.JH569188 645004 63 + 760995 TTTAAAAACATTTTCTTACTGGGTTTTCTTCTATTTCTTTTGTCTAGC---------TATTTC-ATTTTTCTT- i dasNov3.JH569188 C 0 I 22 e saiBol1.JH378287 1346425 23 - 2905041 I e canFam3.chr1 56219018 1281 + 122678785 I a score=2780877.000000 s hg38.chr6_KB021644v2_alt 157953 327 + 185823 CTGAGACGGAGTGATAAG--------Atttatttttttatttttatttttcttgagacagagtctcgctctgttacccaggctggagtgcagtggtacgatctcagctcactgcaacctctgcctcccaggttcaaacggttttgctgcctcagcctcctgagtagctgggattacagacatgcaccgccacactcatctaatttttgtatttttagtagagacagggttttgctgtgttggccaggctcagccttgaactcctgacctttagtgatctgcctgccttggcctcccaaagtgctgggattataggtgtgagccaccatgcccggc s panTro5.chr6 173614726 327 + 175400573 CTGAGACGGGGTGATAAG--------Atttatttttttatttttctttttcttgagacagagtctcgctctgttacccaggctggagtgcagtggtgcgatctcagctcactgcaacctccgcctcccaggttcaaacagttttgctgcctcagcctcttgagtagctgggattacagacatgcaccaccacactcatctaatttttgtatttttagtagagacagggttttgctacgttggccaggctcagccttgaactcctgacctttagtgatctgcctgccttggcctcccaaagtgctgggattataggtgtgagccaccatgcccggc i panTro5.chr6 C 0 C 0 s panPan2.chr6 171848014 327 + 173848474 TTGAGACGGGGTGATAAG--------Atttatttttttatttttatttttcttgagacagagtctcgctctgttacccaggctggagtgcagtggtgcgatctcagctcactgcaacctccgcctcccaggttcaaacagttttgctgcctcagcctcttgagtagctgggattacagacatgcaccaccacactcatctaatttttgtatttttagtagagacagggttttgctatgttggccaggctcagccttgaactcctgacctttagtgatctgcctgccttggcctcccaaagtgctgggattataggtgtgagccaccatgcccggc i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11531113 326 - 12463322 CTGAGACGGGGTGATAAG--------Atttatttttttatttttatttttcttgagacagagtctcgctctgttaccgaggctggagtgcagtggtgcgatctcagctcactgcaacctccacctcccaggttcaaccagttttgctgcctcagcctcctgagtagctgggattacagacgtgcaccaccacactcatctaa-ttttgtatttttagtagagacacggttttgctatgttggccaggctcagccttgaactcctgacctttagtgatctgcctgccttggcctcccaaagtgctgggattataggtgtgagccaccatgcccggc i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156363939 335 + 157873769 CTGAGACAGGGTGATACGTTTTAtttatttatttatttatttttatttttcttgagacagagtctcgctctgttacccaggctggagtgcagtggggcgatctcggctcactgcaacctctgcctcccaagttcaagcagttttgctgcctcagcctcctgagtagctgggattacagacatgcaccaccacactcatctagtttttgtatttttagtatagacagggttttgctatgttggccaggctcagtcttgaactcctgacctttagtgaactgcctaccttggcctcccaaagtgctgggattataggtgtgagccaccatgcccggc i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170392117 333 + 172585720 CTGAGACAGGGTGATAAGTTTTATCTAtttatttatttatttttatttttcttgagacagagtctcgctctgttac--agactggagtgcagtggtgcgatctcagctcactgtgacctcagcctcccaggttcaagaagttttgctgcctcagcctcttgagtagctgggattacagacatgcaccaccacactcagctaatttttgtatttttagtagagacgcagtttcactatgttggccaggctcggtcttgaactcctgacctttagtgatctgcctgccttggcctcccaaggtgctgggattataggtgtgagccactatgcctggc i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169135371 333 - 170955103 CTGAAACAGGGTGATAAGTTTTATCTAtttatttatttatttttatttttcttgagacagagtctcgctctgttac--agactggagtgcagtggtgccatctcagctcactgtgacctcagcctcccaggttcaagaagttttgctgcctcagcctcttgagtagctgggattacagacatgcaccaccacactcagctaatttttgtatttttagtagagacgcggtttcactatgttggccaggctcggtcttgaactcctgacctttagtgatctgcctgccttggcctcccaaggtgctgggattataggtgtgagccactatgcccggc i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8421725 333 + 10161646 CTGAAACAGGGTGATAAGTTTTATCTGtttatttatttatttttatttttcttgagacagagtctcgctctgttac--agactggagtgcagtggtgcgatctcagctcactgtgacctcagcctcccaggttcaagaagttttgctgcctcagcctcttgagtagctgggattacagacatgcaccaccacactcagctaatttttgtatttttagtagagacgcggtttcactatgttggccaggctcggtcttgaactcctgacctttagtgatctgcctgccttggcctcccaaggtgctgggattataggtgtgagccactatgcccggc i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1452082 333 + 3144229 CTGAAACAGAGTGATAAGTTTTATCTAtttatttatttatttttatttttcttgagacagagtctcgctctgttac--agactggagtgcagtggtgcgatctcagctcactgtgacctcagcctcccagattcaagcagttttgctgcctcagcctcttgagtagctgggattacagacatgcaccaccacactcagctaatttttgtatttttagtagagatgcagtttcactatgttggccaggctcggtcttgaactcctgacctttagtgatctgcctgccttggcctcccaaggtgctgggattataggtgtgagccactatgcccggc i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96737393 335 + 98384682 CTGAGACAAGGTGATAAGTTTTATCTAtttatttatttatttttatttttcctgagacagagtctcactctgttacctataatggagtgcagtggtgcgatctcagctcactgtaacctccacctcccaggttcaagcagctttgcagcctcagcctcttgagtagctgggattacagacatgcaccaccacactcagctaatttttgtatttttagtagagaccaggtttcactatgttggccaggctccgtcttgaactcctgacctttagtgatctgcctgccttggcctcccaaggtgctggggttagaggtgtgagccactatgcccggA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8287696 335 - 10857215 CTGAAACAGGGTGATAAGTTTTATCTAtttatttatttatttttatttttcttgagacagagtctcactctgttacccagactggagtgcagtggtgcgatctcagctcactgtgacctcagcctcccaggttcaagcagttttgctgcctcagcctcttgagtagctgggattacagacatgcaccagcacactcagctaatttttgtatttttagtagagacgcggtttcactatgttggccaggctccgtcttgaactcctgacctctagtgatctgcctgccttggcctcccaaggtgctgggattataggtgtgagccactatgcccggc i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15663349 335 - 23502949 CTGAGACAGGGTGATAAGTTTTATCTAtttatttatttatttttatttttcttgagacagagtctcactctgttacccagactggagtgcagtggtgcgatctcagctcactgcaacctccacctcccaagttcaagcagttttgctgcctcagcctcttgagtacctgggattacagacttgcaccaccacactcagctaatttttgtatttttagtagagacagggcttcactatgttggccaggcttggtcttgaactcccgacctttagtgatctgcctgccttggtctcccaaagtgctgggattataggtgtgagccaccatgcccagc i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169946818 329 + 171630274 CTGAGACAGAGTGCTAAGttttatttattta------tattttcatttttcttgagacagagtcttgctctgtcacccaggctggagtgcagtggtgcgatcttagctcacagcaacctccgtctcctgggttcaagcagttctcctgcctcagtctcctgagtagctgggattacaggtgtgcaccaccatgcccagctaatttttgtatttttagtagagacagggtttcactatgtaggccaggctcggtcttgaactcctgatctctagtgacctgcctgcctgggcctcctaaagtgctgggtttataggcatgagccactgtgcccggc i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1312140 333 - 2164891 CTGAGACAGAGTGATACGTTTTACttatttatt--tttatttttatttttcttgagacagagtcttgttctatcacccaggctggagagcagtggtgcgatcttagctcacagcaacttccgcctcctgggttcaagtagttctcctgcctcagcctcccaagtagctgggattacaggtgtgcaccaccatacccagctaatttttgtatttttagtagagatagcgtttcactatgtaggccaggctcggtcttgaactcctgacctctagtgacctgcctgcctcagcctccgaaagtgctgggtttatagacatgaaccactgtgcccagc i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1557398 333 - 1813869 CTGAGACAGAGTAATAAGTTTTAtttatttatt--tttatttttatttttcttgagacagagtcttgctctgtcacccaggctggagtgcagtggtgtgatcttagctcgcagcaacttctgcctcctgggttaaagcagttctcctgccttggtctcctgagtagctgggattacaggtgtgcaccaccacacccagctaatttttgtatttttagtaaagacggggtttcactatgtaggccaggctcagtcttgaacccctgacctctagtgacctgcctgcctcggcctcctaaagtgctgggtttataggcacgaaccactgtgcccggc i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10988440 0 - 12073884 C e saiBol1.JH378287 1346425 23 - 2905041 I e dasNov3.JH569188 645067 22 + 760995 I e canFam3.chr1 56219018 1281 + 122678785 I a score=1514536.000000 s hg38.chr6_KB021644v2_alt 158280 172 + 185823 cAAGACAGGGTGATGAGTTTTAAAGA-GTAAGATCTGTGTT-TATAGTGAGTGCT-GGTAAATAAATTTG--ATGTC-TTTTTATTACATTCATTTTGCAGATACAAAATAACTTACTTGGGTACTAAGCCTCTTGATAAAAAATGACTGAGCCAAAAATCCACGTT--TTCCTTCATGA s panTro5.chr6 173615053 172 + 175400573 cAAGACAGGGTGATGAGTTTTAAAGA-GTAAGATCTGTGTT-TATAGTGAGTGCT-GGTAAATAAATTTG--ATGTC-TTTTTATTACATTCATTTTGCAGATACAAAATAACTTACTTGGGTACTAAGCCTCTTGATAAAAAATGACTGAGCCAAAAATCCACGTT--TTCCTTCATGA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171848341 172 + 173848474 cAAGACAGGGTGATGAGTTTTAAAGA-GTAAGATCTGTGTT-TATAGTGAGTGCT-GGTAAATAAATTTG--ATGTC-TTTTTATTACATTCATTTTGCAGATACAAAATAACTTACTTGGGTACTAAGCCTCTTGATAAAAAATGACTGAGCCAAAAATCCACGTT--TTCCTTCATGA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11531439 172 - 12463322 cAAGACAGGGTGATGAGTTTTAAAGA-GTAAGATCTGTGTT-TATAGTGAGTGCT-GGTAAATAAATTTG--ATGTC-TTTTTATTACATTCATTTTGCAGATACAAAATAACTTACTTGGGTACTAAGCCTCTTGATAAAAAATGACTGAGCCAAAAATCCACGTT--TTCCTTCATGA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156364274 173 + 157873769 cAAGACAGGGTGATGAGTTTTAAAGA-ATAAGATCTGTGTT-TATAGTGAGTGCT-GGTAAATAAATTTG--ACGTCTTTTTTATTACATTCATTTTGCAGACACAAAATAACTTACTTGGGTACTAGGCCTCTTGATAAAAAATGACTGAGCCAAAAATCCATGTT--TTCCTTCATGA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170392450 171 + 172585720 TGAGACAGGATGATAAGTTTTAAAGA-GTAAGGTCTGTGTT-TATAGTGAGTGCT-GGTAAATAAATTTG--ATGTA-TTTTTATTGTATTCATTTTGCAG-TACAAAATAACTTACTTGGGTCCTAGGTCTCTTGATAAAAAATGGCTGAGCCAAAAATCCACGTT--TTCCTTTATGA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169135704 171 - 170955103 TGAGACAGGATGATAAGTTTTAAAGA-GTAAGGTCTGTGTT-TATAGTGAGTGCT-GGTAAATAAATTTG--ATGTA-TTTTTATTGTATTCATTTTGCAG-TACAAAATAACTTACTTGGGTCCTAGGTCTCTTGATAAAAAATGGCTGAGCCAAAAATCCACGTT--TTCCTTCATGA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8422058 171 + 10161646 TGAGACAGGATGATGAGTTTTAAAGA-GTAAGGTCTGTGTT-TATAGTGAGTGCT-GGTAAACAAATTTG--ATGTA-TTTTTATTGTATTCATTTTGCAG-TACAAAATAACTTACTTGGGTCCTAGGTCTCTTGATAAAAAATGGCTGAGCCAAAAATCCACGTT--TTCCTTCATGA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1452415 170 + 3144229 TGAGACAGGATGATAAGTTTTAAAGA-GTGAGATCTGTGTT-TATAGTGAGTGCT-GGTAAATAAATTTG--ATGTA-TTTTTATTGTATTCATTTTGCAG-TAC-AAATAACTTACTTGGGTACTAGGTTTCTTGACAAAAAATGGCTGAGCCAAAAATCCACATT--TTCCTTCATGA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96737728 171 + 98384682 TGAGACAGGATGATAAGTTTTAAAGA-GTAAGGTCTGTGTT-TATAGTGAGTGCT-GGTAAATAAATTTG--ATGTC-TTTTTATTGTATTCATTTTGCAG-TACAAAATAACTTACTTGGGTACTAGGTCTCTTGATAAAAAATGGCTGAGCCAAAAATCCACGTT--TTCCTTCATGA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8288031 171 - 10857215 TGAGACAGGATGATAAGTTTTAAAGA-GTAAGGTCTGTGTT-TATAGTGAGTGCT-GGTGAATAAATTTG--ATGTA-TTTTTATTGTATTCATTTTGCAG-TACAAAATAACTTACTTGGGTCCTAGGTCTCTTGATAAAAAATGGCTGAGCCAAAAATCCACGTT--TTCCTTCATGA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15663684 169 - 23502949 TGAGACAGGATGATAAGTTTTAAAGA-GTAAGATCTGTGTT-TATAGTGAGTGCT-GGTGAATAAATTTG--A--TT-TTTTTATTGTGTTCATTTTGCAG-TACAAAATAACTTACTTGGGTACTAGGTCTCTTGATAAAAAATGGCTGAGCCAAAAATCCACGTT--TACCTTCATGA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169947147 170 + 171630274 cAAGACAGGGTGATATATTTTAAAGA-GTAAGATCTGTGTT-TATGGTGAGTTCT-GATAAATAAATTTG--AT-TT-TTTTAATCGAATGCATTTTGCAGATACAAAA-AACATACTTGAGTACTGGGTCTCTTTACAAAAAATGAATGAGCCAAAACTCCATGTT--TTCCTTCACGA i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1312473 172 - 2164891 cAAGACAAGGTGATACATTTTAAAGA-GTAAGATCTGTGTT-TATAGTGAGTTCT-GATAAATAAATTTG--ATGTC-TTTTTATTGGATTCATTTTGCAGATACAAAATAACATATTTGAGTACTCGGTCTCTTTATAAAAAATGAATGAACCAAAAATCCATGTT--TTCCTTCATGA i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1557731 172 - 1813869 cAAGACAGGGTGATACATTTTAAAGA-GTAAGATCTGTGTT-TATAGTGAGTTCT-GGTAAATAAATTTG--ATGCC-TTTTTATTGGATTCATTTTGCAGATACAAAATAATATACTTGAGTACTGGGTCTCTTGATAAAACGTGAATGAGCCAAAAATCCATGTT--TTCCTTCATGA i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10988440 175 - 12073884 CAAGACCAGGTGATATGTTTTTAACAGGTAAGATCTGTGTTGTATGGTGAGTGGTCAGTAAGTAAATTGGGCATATC-TTTTTAGTGTACTTAGTTTGGAAATACAAAAGAAGCTACTTGGGTTCTA-GTCTC-TGACAAAAATTA--TGAGCCAAAAAGCTACATTTATTCCTTCGTGA i otoGar3.GL873575 C 0 I 32 e saiBol1.JH378287 1346425 23 - 2905041 I e dasNov3.JH569188 645067 22 + 760995 I e canFam3.chr1 56219018 1281 + 122678785 I a score=292485.000000 s hg38.chr6_KB021644v2_alt 158452 35 + 185823 CTAAGacggtatggatatttctctgcccaaatttc s panTro5.chr6 173615225 35 + 175400573 CTAAGacggtatggatatttctctgcccaaatttc i panTro5.chr6 C 0 C 0 s panPan2.chr6 171848513 35 + 173848474 CTAAGacggtatggatatttctctgcccaaatttc i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11531611 35 - 12463322 CTAAGatggtatggatatttctctgcccaagtttc i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156364447 35 + 157873769 CTAAGacggtgtggatatttctctgaccaaatttc i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170392621 35 + 172585720 CTAAAAGggtgtggatatttctctgcccaaatttc i rheMac8.chr4 C 0 I 2 s macFas5.chr4 169135875 35 - 170955103 CTAAAAGggtgtggatatttctctgcccaaatttc i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8422229 35 + 10161646 CTAAAAGggtgtggatatttctctgcccaaatttc i macNem1.NW_012011000v1 C 0 I 2 s cerAty1.NW_012002071v1 1452585 35 + 3144229 CTAAAATGGTGTGGATATTtctctgcccaaatttc i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96737899 35 + 98384682 CTAAAatggtgtggatatttctctgcccaaatttc i chlSab2.chr13 C 0 I 2 s manLeu1.NW_012106474v1 8288202 35 - 10857215 CTAAAAGggtgtggatatttctctgcccaaatttc i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15663853 35 - 23502949 CTAAAatggtgtggatatttctttgcccaaatttc i colAng1.NW_012114488v1 C 0 I 2 s calJac3.chr4 169947317 35 + 171630274 CCAGAatggtgtggatacatctctgcccacatttc i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1312645 35 - 2164891 CTAGAatggtgtggatacatctctgcccacatttc i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1557903 35 - 1813869 CTAGAATGGTGTGGATACTtctctgcccacatttc i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10988615 32 - 12073884 I e saiBol1.JH378287 1346425 23 - 2905041 I e dasNov3.JH569188 645067 22 + 760995 I e canFam3.chr1 56219018 1281 + 122678785 I a score=1911.000000 s hg38.chr6_KB021644v2_alt 158487 1 + 185823 a s panTro5.chr6 173615260 1 + 175400573 a i panTro5.chr6 C 0 C 0 s panPan2.chr6 171848548 1 + 173848474 a i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11531646 1 - 12463322 a i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156364482 1 + 157873769 a i nomLeu3.chr3 C 0 C 0 s cebCap1.NW_016107695v1 1312680 1 - 2164891 a i cebCap1.NW_016107695v1 C 0 I 6 s aotNan1.NW_018494782v1 1557938 1 - 1813869 a i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10988615 32 - 12073884 I e saiBol1.JH378287 1346425 23 - 2905041 I e calJac3.chr4 169947352 0 + 171630274 C e dasNov3.JH569188 645067 22 + 760995 I e colAng1.NW_012114488v1 15663888 2 - 23502949 I e canFam3.chr1 56219018 1281 + 122678785 I e chlSab2.chr13 96737934 2 + 98384682 I e cerAty1.NW_012002071v1 1452620 0 + 3144229 C e manLeu1.NW_012106474v1 8288237 0 - 10857215 C e macNem1.NW_012011000v1 8422264 2 + 10161646 I e rheMac8.chr4 170392656 2 + 172585720 I e macFas5.chr4 169135910 0 - 170955103 C a score=283400.000000 s hg38.chr6_KB021644v2_alt 158488 91 + 185823 tgttgaatatggaatgttgaatggaatccctaatgttgaagggaagtgactgggttatgggagtggatttctcatgaatggtttagcccca s panTro5.chr6 173615261 91 + 175400573 tgttgaatatttaatgttgaatggaatccctaatgttgaagggaagtgactgggttatgggagtggatttctcatgaatggtttagcccca i panTro5.chr6 C 0 C 0 s panPan2.chr6 171848549 91 + 173848474 tgttgaatatttaatgttgaatggaatccctaatgttgaagggaagtgactgggttatgggagtggatttctcatgaatggtttagcccca i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11531647 91 - 12463322 tgttgaatatggaatgttgaatggaatccctaatgttgaagggaagtgactgggttatgggagtagatttctcatgaatggtttagcccca i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156364483 91 + 157873769 tgttgaatatggaatgttgaatggaatccctaatgttgaagggaagtgactgggttacgggagtggatctctcatgaatggtttagcccca i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169135910 78 - 170955103 -------------acgttgaatggaatccctaatgttggagggaagtgattgggttacgggagtggatttctcatgaatggtttagcccca i macFas5.chr4 C 0 C 0 s cerAty1.NW_012002071v1 1452620 78 + 3144229 -------------acgttgaatggaatccctaatgttggagggaagtgattgggttacgggagtggatttctcatgaatggtttagcccca i cerAty1.NW_012002071v1 C 0 C 0 s manLeu1.NW_012106474v1 8288237 78 - 10857215 -------------acgttgaatggaatccctaatgttggagggaagtgattgggttacaggagtggatttctcatgaatggtttagcccca i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169947352 72 + 171630274 -------------aagctgaatggaatccctaacgttggagggcagt-----ggttacgggagtggatttctcatg-atggtttagcccca i calJac3.chr4 C 0 C 0 s aotNan1.NW_018494782v1 1557939 76 - 1813869 --------------agctgggtggaatccctaacgttggagggcagtgactgggtgatgggagtggatttctcacg-atggtttagcccca i aotNan1.NW_018494782v1 C 0 I 362 e otoGar3.GL873575 10988615 32 - 12073884 I e saiBol1.JH378287 1346425 23 - 2905041 I e cebCap1.NW_016107695v1 1312681 6 - 2164891 I e dasNov3.JH569188 645067 22 + 760995 I e colAng1.NW_012114488v1 15663888 2 - 23502949 I e canFam3.chr1 56219018 1281 + 122678785 I e chlSab2.chr13 96737934 2 + 98384682 I e macNem1.NW_012011000v1 8422264 2 + 10161646 I e rheMac8.chr4 170392656 2 + 172585720 I a score=42595.000000 s hg38.chr6_KB021644v2_alt 158579 18 + 185823 tcctcttgacactgtcct s panTro5.chr6 173615352 18 + 175400573 tcctcttgacactgtcct i panTro5.chr6 C 0 C 0 s panPan2.chr6 171848640 18 + 173848474 tcctcttgacactgtcct i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11531738 18 - 12463322 tcctcttgacactgtcct i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156364574 14 + 157873769 tcctcttgacactg---- i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169135988 17 - 170955103 tcctcttgacactgtcc- i macFas5.chr4 C 0 C 0 s cerAty1.NW_012002071v1 1452698 18 + 3144229 tcctcttgacactgtcct i cerAty1.NW_012002071v1 C 0 C 0 s manLeu1.NW_012106474v1 8288315 18 - 10857215 ccctcttgacactgtcct i manLeu1.NW_012106474v1 C 0 I 5173 s calJac3.chr4 169947424 15 + 171630274 --cccctggcactgtcc- i calJac3.chr4 C 0 C 0 e otoGar3.GL873575 10988615 32 - 12073884 I e saiBol1.JH378287 1346425 23 - 2905041 I e aotNan1.NW_018494782v1 1558015 362 - 1813869 I e cebCap1.NW_016107695v1 1312681 6 - 2164891 I e dasNov3.JH569188 645067 22 + 760995 I e colAng1.NW_012114488v1 15663888 2 - 23502949 I e canFam3.chr1 56219018 1281 + 122678785 I e chlSab2.chr13 96737934 2 + 98384682 I e macNem1.NW_012011000v1 8422264 2 + 10161646 I e rheMac8.chr4 170392656 2 + 172585720 I a score=17334.000000 s hg38.chr6_KB021644v2_alt 158597 5 + 185823 gttga s panTro5.chr6 173615370 5 + 175400573 gttga i panTro5.chr6 C 0 C 0 s panPan2.chr6 171848658 5 + 173848474 gttga i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11531756 5 - 12463322 gttga i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170392658 5 + 172585720 gttga i rheMac8.chr4 I 2 C 0 s macNem1.NW_012011000v1 8422266 5 + 10161646 gttga i macNem1.NW_012011000v1 I 2 C 0 s cerAty1.NW_012002071v1 1452716 5 + 3144229 catga i cerAty1.NW_012002071v1 C 0 I 6 s chlSab2.chr13 96737936 5 + 98384682 gttga i chlSab2.chr13 I 2 C 0 s manLeu1.NW_012106474v1 8293506 5 - 10857215 gttga i manLeu1.NW_012106474v1 I 5173 C 0 s colAng1.NW_012114488v1 15663890 5 - 23502949 gttga i colAng1.NW_012114488v1 I 2 C 0 e otoGar3.GL873575 10988615 32 - 12073884 I e saiBol1.JH378287 1346425 23 - 2905041 I e aotNan1.NW_018494782v1 1558015 362 - 1813869 I e cebCap1.NW_016107695v1 1312681 6 - 2164891 I e calJac3.chr4 169947439 0 + 171630274 C e dasNov3.JH569188 645067 22 + 760995 I e canFam3.chr1 56219018 1281 + 122678785 I e nomLeu3.chr3 156364588 0 + 157873769 C e macFas5.chr4 169136005 0 - 170955103 C a score=206558.000000 s hg38.chr6_KB021644v2_alt 158602 53 + 185823 atggaatccctaatgttgaaggga----agtgactgggttacgggagtggatttctc s panTro5.chr6 173615375 53 + 175400573 atggaatccctaatgttgaaggga----agtgactgggttacgggagtggatttctc i panTro5.chr6 C 0 C 0 s panPan2.chr6 171848663 53 + 173848474 atggaatccctaatgttgaaggga----agtgactgggttacgggagtggatttctc i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11531761 53 - 12463322 atggaatccctaatgttgaaggga----agtgactgggttacgggagtggatttctc i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170392663 53 + 172585720 atggaatccctaatgttggaggga----agtgattgggttacgggagtggatttctc i rheMac8.chr4 C 0 C 0 s macNem1.NW_012011000v1 8422271 53 + 10161646 atggaatccctaatgttggaggga----agtgattgggttacgggagtggatttctc i macNem1.NW_012011000v1 C 0 C 0 s chlSab2.chr13 96737941 53 + 98384682 atggaatccctaatgtaggaggga----agtgattgggttacgggagtggatttctc i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8293511 53 - 10857215 atggaatccctaatgttggaggga----agtgattgggttatgggagtggatttctc i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15663895 53 - 23502949 atggaatccctaatgttggaggga----agtgattgggttacaggagtggatttctc i colAng1.NW_012114488v1 C 0 C 0 s cebCap1.NW_016107695v1 1312687 57 - 2164891 atggaatccctgacgttggagggacgtgagtgactgggttatggaagtggatttctt i cebCap1.NW_016107695v1 I 6 C 0 e otoGar3.GL873575 10988615 32 - 12073884 I e saiBol1.JH378287 1346425 23 - 2905041 I e aotNan1.NW_018494782v1 1558015 362 - 1813869 I e calJac3.chr4 169947439 0 + 171630274 C e dasNov3.JH569188 645067 22 + 760995 I e canFam3.chr1 56219018 1281 + 122678785 I e cerAty1.NW_012002071v1 1452721 6 + 3144229 I e nomLeu3.chr3 156364588 0 + 157873769 C e macFas5.chr4 169136005 0 - 170955103 C a score=456301.000000 s hg38.chr6_KB021644v2_alt 158655 91 + 185823 atgaatggtttagccccatcctcttgacactgtcctcatgatag----tgggtgctcacaagatc----tggttgttaaagtgtgtggtgcctcccac-t s panTro5.chr6 173615428 91 + 175400573 atgaatggtttagccccatcctcttgacactgtcctcacgatag----tgggtgctcacaagatc----tggttgttaaagtgtgtggtgcctcccac-t i panTro5.chr6 C 0 C 0 s panPan2.chr6 171848716 91 + 173848474 atgaatggtttagccccatcctcttgacactgtcctcacgatag----tgggtgctcacaagatc----tggttgttaaagtgtgtggtgcctcccac-t i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11531814 91 - 12463322 atgaatggtttagccccatcctcttgacactgtcctcatgatag----tgggtgctcacaagatc----tggttgttaaagtgtgtggtgcctcccac-t i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156364588 64 + 157873769 ------------------tcctcatgatagtg----------ag----tgggtgctcacaagatc----tggttgttaaagtgtgtggtacctcccacac i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170392716 96 + 172585720 atgaatggtttagccccatcctcttgacactgtcctcatgatagtgaatgagtgctcacaagatc----tggttgttgaagtgtgtggcgcctcccacac i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169136005 61 - 170955103 -----------------------------------tcatgatagtgaatgagtgctcacaagatc----tggttgttgaagtgtgtggcacctcccacac i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8422324 96 + 10161646 atgaatggtttagccccatcctcttgacactgtcctcatgatagtgaatgagtgctcacaagatc----tggttgttgaagtgtgtggcgcctcccacac i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1452727 49 + 3144229 -----------------------------------------------atgaatgctcacaagatc----tggttgttgaagtgtgtggtgcctcccacac i cerAty1.NW_012002071v1 I 6 C 0 s chlSab2.chr13 96737994 96 + 98384682 atgaatggcttagccccatcctcttgacactgtcctcatgatagtgaatgagtgctcacaagatc----tggttgttgaagtgtgtggcgcctcccacac i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8293564 96 - 10857215 atgaatggtttagccccatcctcttgacactgtcctcatgatagtgaatgagtgctcacaagatc----tggttgttgaagtgtgtggcgcctcccacac i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15663948 96 - 23502949 atgaatgacttagcctcatcctcttgacactgtcctcatgatagtgaatgagtgctcacaagatc----tggttgttgaagtgtgtggtgcctcccacac i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169947439 64 + 171630274 -----------------------------------tcatgacagtgagtgagggctcacgagatctggttggttgtttaagtgtgtgatgcctcccaca- i calJac3.chr4 C 0 I 1 s cebCap1.NW_016107695v1 1312744 93 - 2164891 atg-atggtttagccccaccccc-tggcactgtcttcatgatagtgagtgagcgctcatgagatc----tgcttgttaaagtgtgtgacgcctcctaca- i cebCap1.NW_016107695v1 C 0 I 1 e otoGar3.GL873575 10988615 32 - 12073884 I e saiBol1.JH378287 1346425 23 - 2905041 I e aotNan1.NW_018494782v1 1558015 362 - 1813869 I e dasNov3.JH569188 645067 22 + 760995 I e canFam3.chr1 56219018 1281 + 122678785 I a score=2009180.000000 s hg38.chr6_KB021644v2_alt 158746 260 + 185823 ctgctcctgctctcaccccctcagatgtccaccc------------------tctcttcgcctttcattataattagaagcttcctaaggcctccccagaagctgagcagacatcatcaccacactttctgtacagcctgcagaaccatgagccaaat-aaacctcttttctttataaattacccagtctcaggtattcctttatggcaa-cccaaggacaagctatacaGTGAAGCCACATGAATCCCATTAATGCAGTGCGCACTGTAATCAGATTGC s panTro5.chr6 173615519 260 + 175400573 ctgctcctgctctcaccccctcagatgtccaccc------------------tctcttcgcctttcatcataattagaagcttcctaaggcctccccagaagctgagcagacatcagcaccacactttctgtacagcctgcagaaccatgagccaaat-aaacctcttttctttataaattacccactctcaggtattcctttatggcaa-cccaaggacaagctatacaGCGAAGCCACATGAATCCCATTAATGCAGTGTGCACTGTAATCAGATTGC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171848807 260 + 173848474 ctgctcctgctctcaccacctcagatgtccaccc------------------tctctttgcctttcatcataattagaagcttcctaaggcctccccagaagctgagcagacatcagcaccacactttctgtacagcctgcagaaccatgagccaaat-aaacttcttttctttataaattacccagtctcaggtattcctttatggcaa-cccaaggacaagctatacaGTGAAGCCACATGAATCCCATTAATGCAGTGTGCACTGTAATCAGATTGC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11531905 260 - 12463322 ctgctcctgctctcaccccctcagatgtccaccc------------------tctcttcccctttcatcataattagaagcttcctaaggcctccccagaaggtgagcagacatcagcaccacactttctgtacagcctgcagaaccatgagccaaat-aaacctcttttctttataaattagccagtctcaggtattcctttatggcaa-cccaaggacaagctatacaGTGAAGCCACATGAATCCCATTAATGCAGTGTGCACTGTAATCAGATTGC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156364652 259 + 157873769 ctgctcctgctc-caccccctcggatgtccaccc------------------tctcttcgcctttcaccataattagaagctccctgaggcctccccagaagctgagcggacatcggcaccacactttctgtacagcctgcagaaccatgagccaaat-aaacctcttctctttataaattacccagtctcaggtattcctttatggcaa-cccaaggagaagctatacaGTGAAGCCACCTGAATCCCATTAATGCAGTGTGCACTGTAATCAGATTGC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170392812 276 + 172585720 ctgctcctgctctcgccccctgagatgtccaccctcccttcgcctttcgccatctcttcgcctttcgccataattagaagcttcctgaggcttccccagaagctgagcagacatcaa-accataccttctctacagcctgcagaaccatgagccaaat-aaacctcttttctttataaattacccagtctcaggtattccttgatggtaa-cccaagaacaggctaTGCAGTG-AGCCACATGAATCCCACTAATGCAGCGCACACTGTAATCAGATTGC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169136066 276 - 170955103 ctgctcctgctctcgccccctgagatgtccaccctcccttcgcctttcgccatctcttcgcctttcgccataattagaagcttcctgaggcttccccagaagctgagcagacatcaa-accatactttctctacagcctgcagaaccatgagccaaat-aaacctcttttctttataaattacccagtctcaggtattccttgatggtaa-cccaagaacaggctaTGCAGTG-AGCCACATGAATCCCACTAATGCAGTGCACACTGTAATCAGATTGC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8422420 276 + 10161646 ctgctcctgctctcgccccctgagatgtccaccctcccttcgccttttgccatctcttcgccttttgccataattagaagcttcctgaggcttccccagaagctgagcagacatcaa-accatactttctctacagcctgcagaaccatgagccaaat-aaacctcttttctttataaattacccagtctcaggtattccttgatggtaa-cccaagaacaggctaTGCAGTG-AGCCACATGAATCCCACTAATGCAGTGCACACTGTAATCAGATTGC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1452776 257 + 3144229 ctgctcctgctcttgccccctgagatttccaccc------------------tctctttgcctttcaccataattagaag-ttcctggggcctcccc--aagctgagcagacatcggcaccacactttctatacagcctgcagaaccatgagccaaat-aaacctcttttctttataaattacccagtctcaggtattccttgatggtaaccccaagaacaggctaTGCAGTG-AGCCACATGAATCCCACTAATGCAGTGCACACTGTAATCAGATTGC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96738090 260 + 98384682 ctgctcctgctctcgccccctgagatgtccaccc------------------tctcttcacctttcaccataactagaagcttcccaaggcctccccagaagctgagcagacgtcggcaccacactttctgtacagcctccagacccatgagccaaataaaacctattttctttataaattacccagtctcaggtattccttgatgataa-cccaagaacaggctaTGCAGTG-AGCCAAATGAATCCCACTAATGTGGTGCACACTGTAATCACATTGC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8293660 276 - 10857215 ctgctcctgctcttgctccctgagatgtccaccctcccttcgcctttcgccatctcttcgcctttcgccataattagaagcttcctgaggcttccccagaagctgagcagacatcaa-accatactttctctacagcctgcagaaccatgagccaaat-aaacctcttttctttataaattacccagtctcaggtattccttgatggtaa-cccaagaacagactaTGCAGTG-AGCCACATGAATCCCACTAATGCAGTGCACACTGTAATCAGATTGC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15664044 259 - 23502949 ctgctcctgctctcaccccctgagatgtccaccc------------------tctcttcgcctttcaccataattagaagcttcctgaggcctccccagaagctgagcagacatcggcaccacactttctgtacagcctgcagaaccatgagccaaat-aaacctcttttctttataaattacccagtctcaggtattccttgatggtaa-cccaagaacagGGTATGCAGTG-AGCCACATGAATTCCACTAATGCAGTGCACACTGTAATCAGATTGC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169947504 258 + 171630274 ctgctcctgctcttcccccgtgagacgtccgccc------------------tctctccgcctttcgtcatgattatgagctccctgaggcctccccagaagctgagcagacatcggcacc-cacttttggtacagcctgcagaaccgcgagccaaat-aacgctcttctccttatggatcacccagtctcagccattcctacacggcaa-cgcgaggacaggctGCACAGCG-AGCCACAGGAATCCCGCGAACGCAGTGTACGCTGCGATGACATTGT i calJac3.chr4 I 1 C 0 s saiBol1.JH378287 1346448 258 - 2905041 ctgcttctgctctttccccgcgagacgtttgccc------------------tctctctgtctttcatcatgattatgagcttcctgaggcctccccaggagctgagcagacgtcggcacc-cactttcggtacagcctgcagagccgtgagccaaat-aacgctcttttctgtacagatcacccagtctcaggcattcctccacagcaa-cgcaagagcaggccaTGCAGCG-AGCCACAGGAGTCCCGCGAATGCAGTGCATGCTGCAATTACATTGT i saiBol1.JH378287 I 23 C 0 s cebCap1.NW_016107695v1 1312838 258 - 2164891 ctgctcctgctcttcccccgtgagacgtccgccc------------------tctttccgcctttcatcatgattatgaacttcctgaggcctccccagaagctgagcagacatcggaacc-cacttttggtacagcctgcagaaccgtgagccaaat-aacgctcttctctttacggatcacccagtctcaggcattccttcacggcaa-cgcgagagcaggctGCGCAGCG-AGTCACAGGAATCCTGCAAATGCAGTGCCCGTCGCAATTACATTGT i cebCap1.NW_016107695v1 I 1 C 0 e otoGar3.GL873575 10988615 32 - 12073884 I e aotNan1.NW_018494782v1 1558015 362 - 1813869 I e dasNov3.JH569188 645067 22 + 760995 I e canFam3.chr1 56219018 1281 + 122678785 I a score=271914.000000 s hg38.chr6_KB021644v2_alt 159006 34 + 185823 TTTCTAATTCTATCTAATTTTCTTCATTTAACAT s panTro5.chr6 173615779 34 + 175400573 TTTCTAATTCTATCCAATTTTCTTCATTTAACAT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171849067 34 + 173848474 TTTCTAATTCTATCCAATTTTCTTCATTTAACAT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11532165 34 - 12463322 TTTCTAATTCTATCTAATTTTCTTCATTTAACAT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156364911 34 + 157873769 TTTCAGATTCTATCTGATTTTCTTCATTTAACAT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170393088 34 + 172585720 TTTCAAGTTCTGTCTAATTGTCTTCATTTAACAT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169136342 34 - 170955103 TTTCAAGTTCTGTCTAATTGTCTTCATTTAACAT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8422696 34 + 10161646 TTTCAAGTTCTGTCTAATTGTCTTCATTTAACAT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1453033 34 + 3144229 TTTCAAGTTCTGTCTAATTGTCTTCATTTAACAT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96738350 34 + 98384682 TTTCAAGTTCTGTCTAATTGTCTTCATTTAACAT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8293936 34 - 10857215 TTTCAAGTTCCGACTAATTGTCTTCATTTAACAC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15664303 34 - 23502949 TTTCAAGTTCTGTCTAGTTGTCTTCATTTAACAT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169947762 34 + 171630274 TTTCAAATTCTATGTCGTTTTCCTAATTTAACAT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1346706 34 - 2905041 TTTCAAATTCTATGTCATTTTCGTAATTTAACAT i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1313096 34 - 2164891 TTTCAAATTCCATGTAGTTTTCATAATTTAACAT i cebCap1.NW_016107695v1 C 0 C 0 s otoGar3.GL873575 10988647 34 - 12073884 tttttaattttacacaattttatttatttaaCGT i otoGar3.GL873575 I 32 C 0 e aotNan1.NW_018494782v1 1558015 362 - 1813869 I e dasNov3.JH569188 645067 22 + 760995 I e canFam3.chr1 56219018 1281 + 122678785 I a score=1913344.000000 s hg38.chr6_KB021644v2_alt 159040 189 + 185823 GGGTTGCAAGAATAGTTATATGTAACTGCAGTCAACCCATAAGATGGAACAGGGTAGTTGCTAAAATAAAGCAACATATCAAGAAG---TAA-GTTTTGAAATTTTTTTTATTAATTGAAATTGGATGATCACTTTTAACTTTATTCATAAATCTATCAAAACTTTAGACACGTTTTGCTAAGCAAAAAGGTA s panTro5.chr6 173615813 188 + 175400573 GGGTTGCAAGAATAGTTATATGTAACTGCAGTCAACCCATAAGATGGAACAGGGTAGTTGCTAAAATAAAGCAACATATCAAGAAG---TAA-GTTTTGAAA-TTTTTTTATTAATTGAAATTGGATGATCACTTTTAACTTTATTCATAAATCTATCAAAACTTTAGACACGTTTTGCTAAGCAAAAAGGTA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171849101 188 + 173848474 GGGTTGCAAGAATAGTTATATGTAACTGCAGTCAACCCATAAGATGGAACAGGGTAGTTGCTAAAATAAAGCAACATATCAAGAAG---TAA-GTTTTGAAA-TTTTTTTATTAATTGAAATTGGATGATCACTTTTAACTTTATTCATAAATCTATCAAAACTTTAGACACGTTTTGCTAAGCAAAAAGGTA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11532199 188 - 12463322 GGGTTGCAAGAATAGTTATATGTAACTGCAGTCAACCCATAAGATGGAACAGGGTAGTTGCTAAAATAAAGCAACATATCAAGAAG---TAA-GTTTTGAAA-TTTTTTTATTAATTGAAATTGGATGATCACTTTTAACTTTATTCATAAATCTATCAAAACTTTAGACACGTTTTGCTAAGCAAAAAGGTA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156364945 188 + 157873769 GGGTTGCAAGAACAGTTATATGTAACTGCAGCCAACCTATAAGATGGAACAGGGTAGTTGCTAAAATAAAGCAACATATCAAGGAG---TAA-GTTTTGAAA-TTTTTTTATTAATTGAAATTGGATGATCACTTTTAACTTTATTCATAAATCTATCAAACCTTTAGACACGTTTTGCTAAGCAAAAAGTTA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170393122 188 + 172585720 GGGTTGCAAGAACAGTTATATGTAACTGCAGTCAAACCGTAAGACGGAACAGGGTAGTTGCTAAAATAAAGCAACATATCAAGAAG---TAA-GTTTTGAAA-TTGTTTTACTAATTGAAATTGGATGATCACTTTTAACTTTATTCATAAACCTATCAAAACTTTAGACACATTTTGCTAAGCAAAAAGATA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169136376 188 - 170955103 GGGTTGCAAGAACAGTTATATGTAACTGCAGTCAAACCGTAAGACGGAACAGGGTAGTTGCTAAAATAAAGCAACATATCAAGAAG---TAA-GTTTTGAAA-TTGTTTTACTAATTGAAATTGGATGATCACTTTTAACTTTATTCATAAACCTATCAAAACTTTAGACACATTTTGCTAAGCAAAAAGATA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8422730 188 + 10161646 GGGTTGCAAGAACAGTTATATGTAACTGCAGTCAAACCGTAAGACGGAACAGGGTAGTTGCTAAAATAAAGCAACATATCAAGAAG---TAA-GTTTTGAAA-TTGTTTTACTAATTGAAATTGGATGATCACTTTTAACTTTGTTCATAAACCTATCAAAACTTTAGACACATTTTGCTAAGCAAAAAGATA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1453067 188 + 3144229 GGGTTGCAAGAACAGTTATATGTAACTGCAGTCAAACCGTAAGACGGAACAGGGTAGTTGCTAAAATAAAGCAACATATCAAGAAG---TAA-GTTTTGAAA-TTGTTTTACTAATTGAAATTGGATGATCACTTTTAACTTTATTCATAAACCTATCAAAACTTTAGACACGTTTTGCTAAGCAAAAAGACA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96738384 185 + 98384682 GGGTTGCAAGAATAGTTATATGTAACTGCAGTCAAACCATAAGACGGAACAGGGTAGTTGCTAAAATAAAGCAACATATCAAGAAG---TAA-GTTTTGAAA-TTGTTTTACTAATTGAAATTG---GATCACTTTTAACTTTATTCATAAACCTATCAAAACTTTAGACACATTTTGCTAAGCAAAAAGATA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8293970 188 - 10857215 GGGTTGCAAGAACAGTTACATGTAACTGCAGTCAAACCGTAAGACGGAACAGGGTGGTTGCTAAAATAAAGCAACATATCAAGAAG---TAA-GTTTTGAAA-TTGTTTTACTAATTGAAATTGGATGATCACTTTTAACTTTATTCATAAACCTATCAAAACTTTAGACACGTTTTGCTAAGCAAAAAGACA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15664337 188 - 23502949 GGGTTGCAAGAACAGTTATATGTAACTGCAGTCAAACCATAAGACGGAACAGGGTAGTTGCTAAAATAAAGCAACATATCAAGAAG---TAA-GTTTTGAAA-TTTTTTTACTAATTGAAATTGGATGAGCACTTTTAACTTTATTCATAAACCTATCAAAACTTTAGACACGTTTTGCTAAGCAAAAAGATA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169947796 191 + 171630274 GGGTTGTGAGGATAGTGATCTATAACTCCAATCAAACCATAAGATGGAACGGGGTAGTTGCTAATATAAAGCAACATATCAGGAAGAAATAA-GTTTTTAAA-TTGTTTTATTAATTGAAATTGGATGATCACTTTTAACTCTATTCATAAATCTATAAATACTTTAGATACTTTTTGCTAAGAAAAAGtata i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1346740 191 - 2905041 GGGTTGCGAGAATAGTTATCCATAACTCCAGTCAAACCATAAGATGGAACAAGGTGGTTGCTAATATAAAGCAACATATCAAGAAGAAATAA-GTTTTAAAA-TTGTTTTATTAATTGAAATTGGATGATCACTTTTAACTGTATTCATAAATCTATCAGTACTTTAGATACTTTTTGCTAGGCaaaaatata i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1313130 187 - 2164891 GGATTGTGAGAATAGTTATCTATAACTCCAGTCAAACCATAAGATGGAACAAGGTAGTTGCTAATATAAAGCAACATATCAAGAAGAAATAA-GTTTTAAAA-TTGTTTTATTAATTGAAGT----TGATCACTTTTTACTGTATTCATAAATCTATCAATACTTTAGATACTTTTTGCTAAGCAAAAATATA i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1558377 191 - 1813869 GGGTGGCGAGAATAGTTACCTTTAACTCCAGTCAAAGCATAAGATGGGACGGGGCGGTTGCTAAGATAAAGCAACATGCCAGGAAGAAACAC-GTTTTAAAA-TTGTTTTATTAATTGAAATTGGATGATCACTTTTAACTCTATTCATACATCTATCAATGCTTTAGATACTCTTTGCTAAGCAAAAATATA i aotNan1.NW_018494782v1 I 362 C 0 s otoGar3.GL873575 10988681 187 - 12073884 GGGTTCTAAGAATAGTTCAATGGAATTCCTGTGAAAAC-TCTGACTGATTAGTGTAATTAGTAAAATAAAGCAACATATCTAGAAG---AAATGTTCCAGAA-TTGTTTTATTAATTGAAATAGGGTGATCACTATTAACTTTACTGACACGTCTGTCAA-ACTTTAGATGCTTTTGGTGAAGCAACATGTTA i otoGar3.GL873575 C 0 C 0 e dasNov3.JH569188 645067 22 + 760995 I e canFam3.chr1 56219018 1281 + 122678785 I a score=4853.000000 s hg38.chr6_KB021644v2_alt 159229 2 + 185823 TT s panTro5.chr6 173616001 2 + 175400573 TT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171849289 2 + 173848474 TT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11532387 2 - 12463322 TT i gorGor5.CYUI01015032v1 C 0 C 0 s cerAty1.NW_012002071v1 1453255 2 + 3144229 TC i cerAty1.NW_012002071v1 C 0 C 0 s manLeu1.NW_012106474v1 8294158 2 - 10857215 TC i manLeu1.NW_012106474v1 C 0 C 0 s cebCap1.NW_016107695v1 1313317 2 - 2164891 TT i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1558568 2 - 1813869 TT i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10988868 2 - 12073884 TT i otoGar3.GL873575 C 0 C 0 e saiBol1.JH378287 1346931 0 - 2905041 C e calJac3.chr4 169947987 0 + 171630274 C e dasNov3.JH569188 645067 22 + 760995 I e colAng1.NW_012114488v1 15664525 0 - 23502949 C e canFam3.chr1 56219018 1281 + 122678785 I e chlSab2.chr13 96738569 0 + 98384682 C e nomLeu3.chr3 156365133 0 + 157873769 C e macNem1.NW_012011000v1 8422918 0 + 10161646 C e rheMac8.chr4 170393310 0 + 172585720 C e macFas5.chr4 169136564 0 - 170955103 C a score=16605.000000 s hg38.chr6_KB021644v2_alt 159231 10 + 185823 -TTAATACAAt s panTro5.chr6 173616003 10 + 175400573 -TTAATACAAt i panTro5.chr6 C 0 C 0 s panPan2.chr6 171849291 10 + 173848474 -TTAATACAAT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11532389 10 - 12463322 -TTAATACAAt i gorGor5.CYUI01015032v1 C 0 C 0 s cebCap1.NW_016107695v1 1313319 10 - 2164891 -TTAATACAAT i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1558570 10 - 1813869 -TTAATACAAT i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10988870 11 - 12073884 GTACATACAAT i otoGar3.GL873575 C 0 I 3627 e saiBol1.JH378287 1346931 0 - 2905041 C e calJac3.chr4 169947987 0 + 171630274 C e dasNov3.JH569188 645067 22 + 760995 I e colAng1.NW_012114488v1 15664525 0 - 23502949 C e canFam3.chr1 56219018 1281 + 122678785 I e chlSab2.chr13 96738569 0 + 98384682 C e cerAty1.NW_012002071v1 1453257 0 + 3144229 C e nomLeu3.chr3 156365133 0 + 157873769 C e manLeu1.NW_012106474v1 8294160 0 - 10857215 C e macNem1.NW_012011000v1 8422918 0 + 10161646 C e rheMac8.chr4 170393310 0 + 172585720 C e macFas5.chr4 169136564 0 - 170955103 C a score=1365.000000 s hg38.chr6_KB021644v2_alt 159241 1 + 185823 t s panTro5.chr6 173616013 1 + 175400573 t i panTro5.chr6 C 0 C 0 s panPan2.chr6 171849301 1 + 173848474 T i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11532399 1 - 12463322 t i gorGor5.CYUI01015032v1 C 0 C 0 s cebCap1.NW_016107695v1 1313329 1 - 2164891 T i cebCap1.NW_016107695v1 C 0 I 2 s aotNan1.NW_018494782v1 1558580 1 - 1813869 T i aotNan1.NW_018494782v1 C 0 I 2 e otoGar3.GL873575 10988881 3627 - 12073884 I e saiBol1.JH378287 1346931 0 - 2905041 C e calJac3.chr4 169947987 0 + 171630274 C e dasNov3.JH569188 645067 22 + 760995 I e colAng1.NW_012114488v1 15664525 0 - 23502949 C e canFam3.chr1 56219018 1281 + 122678785 I e chlSab2.chr13 96738569 0 + 98384682 C e cerAty1.NW_012002071v1 1453257 0 + 3144229 C e nomLeu3.chr3 156365133 0 + 157873769 C e manLeu1.NW_012106474v1 8294160 0 - 10857215 C e macNem1.NW_012011000v1 8422918 0 + 10161646 C e rheMac8.chr4 170393310 0 + 172585720 C e macFas5.chr4 169136564 0 - 170955103 C a score=109817.000000 s hg38.chr6_KB021644v2_alt 159242 209 + 185823 ttttttattattatactttaagttttagggtacatgtgcacaatgtgcaggttagttacatatgtatacatgtgccatgctggtgtgctgcacccattaactcatcatttagcattaggtatatctcccaatgctatccctcctccctccccccaccccacaacagtccccagagtgtgatgttccccttcctgtgtccatgtgttctc s panTro5.chr6 173616014 209 + 175400573 ttttaaattattatactttaagttttagggtacatgtgcacattgtgcaggttagttacatatgtatacatgtgccatgctggtgcgctgcacccactaactcgtcatctagcattaggtatatctcccaatgctatccctcccccctccccccaccccacaacagtccccagagtgtgatgttccccttcctgtgtccatgtgttctc i panTro5.chr6 C 0 I 10088 s panPan2.chr6 171849302 205 + 173848474 TTT----ttaatatactttaagttttagggtacatgtgcacaatgtgcaggttagttacatatgtatacatgtgccatgctggtgtgctgcacccattaactcatcatttagcattaggtatatctcccaatgctatccctcccccctccccccaccccacaacagtccccagagtgtgatgttccccttcctgtgtccatgtgttctc i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11532400 208 - 12463322 ttt-ttattattatactttaagttttagggtacatgtgcacaatgtgcaggttagttacatatgtatacatgtgccatgctggtgtgctgcacccattaattcatcatttggcattaggtatatctcctaatgctatccctcctccctccccccaccccacaacagtccccagagtgtgatgttccccttcctgcgtccatgtgttctc i gorGor5.CYUI01015032v1 C 0 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e saiBol1.JH378287 1346931 0 - 2905041 C e aotNan1.NW_018494782v1 1558581 2 - 1813869 I e cebCap1.NW_016107695v1 1313330 2 - 2164891 I e calJac3.chr4 169947987 0 + 171630274 C e dasNov3.JH569188 645067 22 + 760995 I e colAng1.NW_012114488v1 15664525 0 - 23502949 C e canFam3.chr1 56219018 1281 + 122678785 I e chlSab2.chr13 96738569 0 + 98384682 C e cerAty1.NW_012002071v1 1453257 0 + 3144229 C e nomLeu3.chr3 156365133 0 + 157873769 C e manLeu1.NW_012106474v1 8294160 0 - 10857215 C e macNem1.NW_012011000v1 8422918 0 + 10161646 C e rheMac8.chr4 170393310 0 + 172585720 C e macFas5.chr4 169136564 0 - 170955103 C a score=109624.000000 s hg38.chr6_KB021644v2_alt 159451 204 + 185823 attgttcaattcccatctatgagtgagaacatgtggtgtttggttttttgtccttgtgatagtttactgagaatgatgatttccaatttcatccatgtccctacaaaggacatgaactcatcattttttatggctgcatagtattccatggtgtatatatgccacattttcttaatccagtctatcattgttggacatttgggc s panTro5.chr6 1780404 204 - 175400573 attgttcaattcccatctatgagtgagaacatgcgatgtttggttttttgtccttgtgatagtttactgagaatgatgatttccaatttcatccatgtccctacaaaggacatgaacttatcattttttatggctgcatagtattccatggtgtatatatcccacattttcttaatccagtctatcattgttggacatttgggc i panTro5.chr6 n 10088 C 0 s panPan2.chr6 171849507 201 + 173848474 attgttcaattcccatctatgagtgagaacatgcgatgtttggttttttgtccttgtgatagtttactgaga---atgatttccaatttcatccatgtccctacaaaggacatgaacttatcattttttatggctgcatagtattccatggtgtatatatcccacattttcttaatccagtctatcattgttggacatttgggc i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11532608 204 - 12463322 attgttcaattcccatctatgagtgagaacatgaggggtttggttttttgtccttgtgatagtttactgagaatgatgatttccaatttcatccatgtccctacaaaggacatgaactcatcattttttatggctgcatagtattccatggtgtatatatgccacattttcttaatccagtctatcattgttggacatttgggc i gorGor5.CYUI01015032v1 C 0 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e saiBol1.JH378287 1346931 0 - 2905041 C e aotNan1.NW_018494782v1 1558581 2 - 1813869 I e cebCap1.NW_016107695v1 1313330 2 - 2164891 I e calJac3.chr4 169947987 0 + 171630274 C e dasNov3.JH569188 645067 22 + 760995 I e colAng1.NW_012114488v1 15664525 0 - 23502949 C e canFam3.chr1 56219018 1281 + 122678785 I e chlSab2.chr13 96738569 0 + 98384682 C e cerAty1.NW_012002071v1 1453257 0 + 3144229 C e nomLeu3.chr3 156365133 0 + 157873769 C e manLeu1.NW_012106474v1 8294160 0 - 10857215 C e macNem1.NW_012011000v1 8422918 0 + 10161646 C e rheMac8.chr4 170393310 0 + 172585720 C e macFas5.chr4 169136564 0 - 170955103 C a score=12012.000000 s hg38.chr6_KB021644v2_alt 159655 2 + 185823 tT s panTro5.chr6 1780608 2 - 175400573 tt i panTro5.chr6 C 0 C 0 s panPan2.chr6 171849708 2 + 173848474 tT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11532812 2 - 12463322 tT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156365133 2 + 157873769 TT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170393310 2 + 172585720 TT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169136564 2 - 170955103 TT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8422918 2 + 10161646 TT i macNem1.NW_012011000v1 C 0 C 0 s chlSab2.chr13 96738569 2 + 98384682 TT i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15664525 2 - 23502949 TT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169947987 2 + 171630274 tt i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1346931 2 - 2905041 tt i saiBol1.JH378287 C 0 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e aotNan1.NW_018494782v1 1558581 2 - 1813869 I e cebCap1.NW_016107695v1 1313330 2 - 2164891 I e dasNov3.JH569188 645067 22 + 760995 I e canFam3.chr1 56219018 1281 + 122678785 I e cerAty1.NW_012002071v1 1453257 0 + 3144229 C e manLeu1.NW_012106474v1 8294160 0 - 10857215 C a score=94287.000000 s hg38.chr6_KB021644v2_alt 159657 15 + 185823 TTAATACAATTAAAC s panTro5.chr6 1780610 15 - 175400573 ttattacaattaaac i panTro5.chr6 C 0 C 0 s panPan2.chr6 171849710 15 + 173848474 TTAATACAATTAAAC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11532814 15 - 12463322 TTAATACAATTAAAC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156365135 11 + 157873769 TTAATACAATT---- i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170393312 15 + 172585720 TTAATACAATTAAAC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169136566 15 - 170955103 TTAATACAATTAAAC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8422920 15 + 10161646 TTAATACAATTAAAC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1453257 15 + 3144229 TTAATACAATTAAAC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96738571 15 + 98384682 TTAATACAATTAAAC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8294160 15 - 10857215 TTAATACAATTAAAC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15664527 15 - 23502949 TTAATACAATTAAAC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169947989 13 + 171630274 ttaattcaattaa-- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1346933 13 - 2905041 ttaatacaattaa-- i saiBol1.JH378287 C 0 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e aotNan1.NW_018494782v1 1558581 2 - 1813869 I e cebCap1.NW_016107695v1 1313330 2 - 2164891 I e dasNov3.JH569188 645067 22 + 760995 I e canFam3.chr1 56219018 1281 + 122678785 I a score=323968.000000 s hg38.chr6_KB021644v2_alt 159672 30 + 185823 AAATATATATGTACATGTTCACACATGGGT s panTro5.chr6 1780625 30 - 175400573 aaatatatatgtacatgtTCACACATGGGT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171849725 30 + 173848474 AAATATATATGTACATGTTCACACATGGGT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11532829 30 - 12463322 AAATATATATGTACATGTTCACACATGGGT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156365146 30 + 157873769 AAATATATATGTACATGTTCACACATGGGT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170393327 30 + 172585720 AAATATATATGTACATGTTCACACATGGGT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169136581 30 - 170955103 AAATATATATGTACATGTTCACACATGGGT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8422935 30 + 10161646 AAATATATATGTACATGTTCACACATGGGT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1453272 30 + 3144229 AAATATATATGTACATGTTCACACATGGGT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96738586 30 + 98384682 AAATATATATGTACATGTTCACACATGGGT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8294175 30 - 10857215 AAATATATATGTACATGTTCACACATGGGT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15664542 30 - 23502949 AAATATATATGTACATGTTCACACATGGGT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169948002 30 + 171630274 aaatatatatGTACAAGTTCACACCTGGGT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1346946 30 - 2905041 aaatatatatGTACATGTTCACACATGGGT i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1313332 30 - 2164891 AAATATATACGTACGTGTTCACACATGGGT i cebCap1.NW_016107695v1 I 2 C 0 s aotNan1.NW_018494782v1 1558583 30 - 1813869 AAATACATATGTACGTGTTCACACATGGGT i aotNan1.NW_018494782v1 I 2 I 106 e otoGar3.GL873575 10988881 3627 - 12073884 I e dasNov3.JH569188 645067 22 + 760995 I e canFam3.chr1 56219018 1281 + 122678785 I a score=-20183.000000 s hg38.chr6_KB021644v2_alt 159702 12 + 185823 ATGGT----------AAAAA-AA s panTro5.chr6 1780655 12 - 175400573 ATGGT----------AAAAA-AA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171849755 11 + 173848474 ATGGT-----------AAAA-AA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11532859 13 - 12463322 ATGGT---------AAAAAA-AA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156365176 15 + 157873769 ATGGT-------aaaaaaaa-aa i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170393357 10 + 172585720 ATGGG-------------GGAAA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169136611 9 - 170955103 ATGGG-------------GG-AA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8422965 9 + 10161646 ATGGG-------------GG-AA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1453302 9 + 3144229 ATGGG-------------GG-AA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96738616 9 + 98384682 ATGGG-------------GG-AA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8294205 9 - 10857215 ATGGG-------------GG-AA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15664572 9 - 23502949 ATGGG-------------AA-AA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169948032 5 + 171630274 TTGGT------------------ i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1346976 5 - 2905041 TTGGT------------------ i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1313362 12 - 2164891 TTGGTAAAAAAA----------- i cebCap1.NW_016107695v1 C 0 I 11 e otoGar3.GL873575 10988881 3627 - 12073884 I e aotNan1.NW_018494782v1 1558613 106 - 1813869 I e dasNov3.JH569188 645067 22 + 760995 I e canFam3.chr1 56219018 1281 + 122678785 I a score=100746.000000 s hg38.chr6_KB021644v2_alt 159714 19 + 185823 AAAAAAA----AACTGATCGCTG s panTro5.chr6 1780667 19 - 175400573 AAAAAAA----AGCTGGTCGCTG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171849766 19 + 173848474 AAAAAAA----AGCTGGTCGCTG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11532872 19 - 12463322 AAAAAAA----AGCTGGTCGCTG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156365191 19 + 157873769 aaaaaaa----GGCTGGTCGCTG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170393367 19 + 172585720 AAAAAAA----AGGTGGTTGCTG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169136620 19 - 170955103 AAAAAAA----AGGTGGTTGCTG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8422974 19 + 10161646 AAAAAAA----AGGTGGTTGCTG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1453311 19 + 3144229 AAAAAAA----AGCTGGTTGCTG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96738625 23 + 98384682 AAAAAAAACACAACTGGTTGCTG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8294214 18 - 10857215 AAGAAA-----AGCTGGTTGCTG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15664581 20 - 23502949 AAAAAAAA---AGCTGGTTGCTG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169948037 18 + 171630274 -AAAAAA----TGTTGGTGACAT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1346981 18 - 2905041 -AAAAAA----AGTTGGTCACAT i saiBol1.JH378287 C 0 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e aotNan1.NW_018494782v1 1558613 106 - 1813869 I e cebCap1.NW_016107695v1 1313374 11 - 2164891 I e dasNov3.JH569188 645067 22 + 760995 I e canFam3.chr1 56219018 1281 + 122678785 I a score=580997.000000 s hg38.chr6_KB021644v2_alt 159733 92 + 185823 AATTGCTTTTGTTAAGAAGCCAAACGACTGTACCTCAGTCTCTGGCAGCAGGATCCTGA----------------------GCCT--------------------------------------------GTTCTTGCAGGAGCCTGAGCCTGTTCTTA s panTro5.chr6 1780686 114 - 175400573 AATTGCTTTTGTTAAGAAGCCAAACGACTGTACCTCTGTCTCTGGCAGCAGgagcctgaccctgttcttgcaggagcctgagcct--------------------------------------------gttcttgcaggagcctgagcctgTTCTTA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171849785 114 + 173848474 AATTGCTTTTGTTAAGAAGCCAAACGACTGTACCTCTGTCTCTGGCAGCAGgagcctgaccctgttcttgcaggagcctgagcct--------------------------------------------gttcttgcaggagcctgagcctgTTCTTG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11532891 92 - 12463322 AATTGCTTTTGTTAAGAAGCCAAACGACTGTACCTCAGTCTCTGGCAGCAGGATCCTGA----------------------GCCT--------------------------------------------GTTCTTGCAGGAGCCTGAGCCTTTTCTTA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156365210 70 + 157873769 AATTGCTTTTGTTAAGAAGCCAAACAACTGTACCTCAGTCTCTGGCAGCAGGAGCCTAA----------------------------------------------------------------------------------------GCCTGTTCTTG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170393386 87 + 172585720 AATTGCTTTTGTTAAG-AGCCAA--CACTGCACCTCAG-TTCTGGCAGCAGGAGCTGGA----------------------G-CT--------------------------------------------GTTCTTGCAGAGGCCTGAGCTTGTTCTTG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169136639 92 - 170955103 AATTGCTTTTGTTAAGAAGCCAAACAACTGCACCTCAGTTTCTGGAAGCAGGAGCCTGA----------------------GCCT--------------------------------------------GTTCTTGCAGGAGCCTGAGCTTGTTCTTG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8422993 92 + 10161646 AATTGCTTTTGTTAAGAAGCCAAACAACTGCACCTCAGTTTCTGGCAGCAGGAGCCTGA----------------------GCCT--------------------------------------------GTTCTTGCAGGAGCCTGAGCTTGTTCTTG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1453330 136 + 3144229 AATTGCTTTTGTTAAGAAGCCAAACAACTGCACCTCAGTTTCTGGCAGCAGGAGCCTGA----------------------GCCTGTTCTTACAGGAGTCTGAGCCTGTTCTTACAGGAGCCTGAGCTTGTTCTTGCAGGAGCCTGAGCTTGTTTTTG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96738648 92 + 98384682 AATTGCTTTTGTTAAGAAGCCAAACAACTGCACCTCAGTCTCTGGCAGCAGGAGCCTGA----------------------GCCT--------------------------------------------GTTCTTGCAGGAGCCTGAGCTTGTTCTTG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8294232 92 - 10857215 AATTGCTTTTGTTAAGAAGCCAAACAACTGCACCTCAGTCTCTGGCAGCAGGAGCCTGA----------------------GCCT--------------------------------------------GTTCTTACAGGAGCCTGAGCCTGTTCTTA i manLeu1.NW_012106474v1 C 0 I 198 s colAng1.NW_012114488v1 15664601 92 - 23502949 AATTGCTTTTGTTAAGAAGCCAAACAACTGCACCTCAGTCTCTGGCAGCAGGAGCTTGA----------------------GCCT--------------------------------------------GTTCTTGCAGGAAACTGAACTTGTTCTTG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169948055 70 + 171630274 AATTGCTTTTGTTAAGAAGCCAAGCAACTGCACCCGAGTCTCTGGCAGCAGGAGCCTGA----------------------GCCT--------------------------------------------GTTCTTG---------------------- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1346999 70 - 2905041 AATTGCTTTTGTTAAGAAGCCAAGCAGCTGCCCCTGAGTCTCGGGCAGCAGGATCCTGA----------------------GCCT--------------------------------------------GTTCCTG---------------------- i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1313385 70 - 2164891 AATTGCTTTTGCTAAGAAGCCAAGCAACTGCACCTGCGTCTCAGGTAGCAGGAGCCTGA----------------------GCCT--------------------------------------------GTTCTTG---------------------- i cebCap1.NW_016107695v1 I 11 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e aotNan1.NW_018494782v1 1558613 106 - 1813869 I e dasNov3.JH569188 645067 22 + 760995 I e canFam3.chr1 56219018 1281 + 122678785 I a score=62290.000000 s hg38.chr6_KB021644v2_alt 159825 10 + 185823 TGATAACAGA s panTro5.chr6 1780800 10 - 175400573 TGATAACAGA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171849899 10 + 173848474 TGATAACAGA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11532983 10 - 12463322 TGATAACAGA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156365280 10 + 157873769 TGATAACAGA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170393473 9 + 172585720 TGATAA-AGA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169136731 10 - 170955103 TGATAACAGA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8423085 10 + 10161646 CGATAACAGA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1453466 10 + 3144229 TGATAACAGA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96738740 10 + 98384682 TGATAACAGA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8294522 10 - 10857215 TGATAACAGA i manLeu1.NW_012106474v1 I 198 C 0 s colAng1.NW_012114488v1 15664693 10 - 23502949 TGATAACAGA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169948125 4 + 171630274 TGAT------ i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1347069 9 - 2905041 TGATGACTG- i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1313455 10 - 2164891 TGATAACAGA i cebCap1.NW_016107695v1 C 0 I 36 e otoGar3.GL873575 10988881 3627 - 12073884 I e aotNan1.NW_018494782v1 1558613 106 - 1813869 I e dasNov3.JH569188 645067 22 + 760995 I e canFam3.chr1 56219018 1281 + 122678785 I a score=176345.000000 s hg38.chr6_KB021644v2_alt 159835 39 + 185823 CAGCTCTGAACACAAATGTGCTGG----T----CTTCTTCAGCTTCA s panTro5.chr6 1780810 39 - 175400573 CAGCTCTGAACACAAATGTGCTGG----T----CTTCTTCAGCTTCA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171849909 39 + 173848474 CAGCTCTGAACACAAATGTGCTGG----T----CTTCTTCAGCTTCA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11532993 39 - 12463322 CAGCTCTGAACACAAATGTGCTGG----T----CTTCTTCAGCTTCA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156365290 39 + 157873769 CAGCTCTGAGCACAAATGTGTTGG----T----CTTCTTCAGCTTCA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170393482 36 + 172585720 CAGTT-TGAACAC-AATGTGCTGG----T-----TTCTTCAGCTTCA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169136741 39 - 170955103 CAGTTCTGAACACAAATGTGCTGG----T----CTTCTTCAGCTTCA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8423095 39 + 10161646 CAGTTCTGAACACAAATGTGCTGG----T----CTTCTTCAGCTTCA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1453476 43 + 3144229 CAGTTCTGAACACAAATGTGCTGG----TCTTTCTTCTTCAGCTTCA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96738750 39 + 98384682 CAGTTCTGAACACAAATGTGCTGG----T----CTTCTTCAGCTTCA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8294532 43 - 10857215 CAGTTCTGAACACAAATGTGCTGGTCTTT----CTTCTTCAGCTTCA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15664703 39 - 23502949 CAGCTCTGAACACAAAGGTGCTGG----T----CTTCTTCAGCTTCA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169948129 13 + 171630274 ----------AACGAGCGTGCCA------------------------ i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1347078 19 - 2905041 -AGCTCGGAAAACGAGCGTG--------------------------- i saiBol1.JH378287 C 0 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e aotNan1.NW_018494782v1 1558613 106 - 1813869 I e cebCap1.NW_016107695v1 1313465 36 - 2164891 I e dasNov3.JH569188 645067 22 + 760995 I e canFam3.chr1 56219018 1281 + 122678785 I a score=1708477.000000 s hg38.chr6_KB021644v2_alt 159874 200 + 185823 CCCTTTCCAGTTCTCTATCTTCAGTATCTGTCTCGGGACCCACCT--------GTAACCTCCCTCGTGTCTTCCATTTCCGAAGGCAAGTTCCTTAGGTAGGAACCATCTCTGTGAAAGGGGAGGCT-GCAATGGT-GCCATGAAGAAAGACTGGGAATGGTTTCCGTGAAAACACAGGCAGGCCGGGCGCCACTTCTGAGTCTGATGTG s panTro5.chr6 1780849 200 - 175400573 CCCTTTCCAGTTCTCTATCTTCAGTATCTGTCTCGGGACCCACCT--------GTAACCTCCCTCGTGTCTTCCCTTTCTGAAGGCAAGTTCCTTAGGTAGGAACCATCTCTGTGAAAGGGGAGGCT-GCAATGGT-GCCATGAAGAAAGACTGGGAATGGTTTCCGTGAAAACACAGCCAGGCCGGGCGCCACTTCTGAGTTTGATGTG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171849948 200 + 173848474 CCCTTTCCAGTTCTCTATCTTCAGTATCTGTCTCGGGACCCACCT--------GTAACCTCCCTCGTGTCTTCCCTTTCTGAAGGCAAGTTCCTTAGGTAGGAACCATCTCTGTGAAAGGGGAGGCT-GCAATGGT-GCCATGAAGAAAGACTGGGAATGGTTTCCGTGAAAACACAGCCAGGCCGGGCGCCACTTCTGAGTTTGATGTG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11533032 200 - 12463322 CGCTTTCCAGTTCTCTATCTTCAGTATCTGTCTCGGGACCCACCT--------GTAACCTCCCTCGTGTCTTCCATTTCCGAAGGCAAGTTTCTTAGGTAGGAACCATCTCTGTGAAAGGGGAGGCT-GCAATGGT-GCCATGAAGAAAGACTGGGAATGGTTTCCGTGAAAACACAGCCAGGCCAGGCGCCACTTCTGAGTCTGATGTG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156365329 198 + 157873769 CCCTTTCCAGTTCTCTATCTTCAGTATCTGTCTCGGGACCCACCT--------CTAACCTCCCTCGTGTATTCCATTTCTGAAGGCAAGTTCCTTAGGTAGGAACCATCTCTGTGAAGGGGGAGGCT-GCAATGGT-GCCATGAAGAAAGACCAGGAATGGTTTCCGTGAAAACACAGCCAGGCCGGGTGCCACTCCTGAG--TGATGCA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170393518 187 + 172585720 CCCTTTCCTGTTCTCTACC-TCAGTGTCTGTCTCAGA--CCA-CT--------CTAA-CTCCCTCGTGTCTTCCATTTCCGAAGGCAG--TCCTT-AGT-GG-ACCATCTCTGT-AAAGGGGAGGCTGGCAATGGTGGCCGTGAAGAAAGACTGGGAAT-GTTTCTGTG-CAACACAGCCAGGCCGGGCGC--CTTCTGAGTCTGATGCA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169136780 199 - 170955103 CCCTTTCCTGTTCTCTACCTTCAGTGTCTGTCTCAGGACCCACCT--------CTAACCTCCCTCGTGTCTTCCATTTCCGAAGGCAAGTTCCTTAAGT-GGAACCATCTCTGTGAAAGGGGAGGCT-GCAATGGT-GCCGTGAAGAAAGACTTGGAATGGTTTCTGTGAAAACACAGCCAGGCCGGGCGCCACTTCTGAGTCTGATGCA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8423134 199 + 10161646 CCCTTTCCTGTTCTCTACCTTCAGTGTCTGTCTCAGGACCCACCT--------CTAACCTCCCTCGTGTCTTCCATTTCCGAAGGCAAGTTCCTTAAGT-GGAACCATCTCTGTGAAAGGGGAGGCT-GCAATGGT-GCCGTGAAGAAAGACTGGGAATGGTTTCTGTGAAAACACAGCCAGGCCGGGCGCCACTTCTGAGTCTGATGCA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1453519 199 + 3144229 CCCTTTCCTGTTCTCTATCTTCAGTGTCTGTCTCGGGACCCACCT--------CTAACCTCCCTCGTGTCTTCCATTTCCGAAGGCAAGTTCCTTAAGT-GGAACCATCTCTGTGAAAGGGGAGGCT-GCAATGGT-GCCGTGAAGAAAGACTGGGAATGGTTTCTGTGAAAACACAGCCAGGCCGGGCGCCACTTCTGAGTCTGATGCA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96738789 199 + 98384682 CCCTTTCCTGTTCTCTATCTTCAGTGTCTGTCTCGGGACCCACCT--------CTAACCTCCCTCGTGTCTTCCATTTCCGAAGGCAAGTTCCTTAAGT-GGAGCCTTCTCCGTGAAAGGGGAGGCT-GCAATGGT-GCCGTGAAGAAAGACTGGGAATGGGTTCTGTGAAAACACAGCCAGGCCCGGCGCCACTTCTGAGTCTGATGCG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8294575 199 - 10857215 CCCTTTCCTGTTCTCTATCTTCAGTGTCTGTCTCGGGACCCACCT--------CTAACCTTCCTCATGTCTTCCATTTCCGAAGGCAAGTTCCTTAAGT-GGAGCCATCTCTGTGAAAGGGGAGGCT-GCAATGGT-GCCGTGAAGAAAGACTGGGAATGGTTTCTGTGAAAACACAGCCAGGCCGGGCGCCACTTCTGAGTCTGATGCA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15664742 199 - 23502949 CCCTTTCCTGTTCTCTATCTTCAGTGTCTGTCTCGGGACCTACCT--------CTAACCTCCCTCGAGTCTTCCATTTCCGAAGGCAAGTTCCTTAAGT-GGAACCATCTCTGTGAAAGGGGAGGCT-GCAATGGT-GCGGTGAAGAAAGACTGGGAATGGTTTCTGTGAAAACACAGCCAGGCCGGGCACCACTTCTGAGTCTGATGCG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169948142 198 + 171630274 CCCTTTCCAGTTCTCTGTCTGCAGCGCCTGTCTCGGGACCCACCA--------CTAACCTGCCTTCTGTCTTCCATTTCTGAA-GCAGGTTCCTTAGCTAGGAACCATCTCTGTGAA-GGGGAGGCT-GCAACAGT-GCCACGAAGAAGCAACGGGAATGGCTTCCTGGACAACACAGCCAGGCCAGGCACCGCTTCCGAGCCTGATGCT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1347097 201 - 2905041 TCCTTTCCATTTCTCTATCTGCAGTGTCTGGCTCAGGAGCCACCACTAAGCTCCTAACCTCCCTTCTGTCTTCCATTTCTGAAGGCAGGTTCCTTAGGCAGGAACCATCTCTGTGAA-GGGGAGACT-GCAATGGT-GCCACGCAGAAAGACCAGGAATGGTTTCTTGGAACACACAGCCAGGCCAGGCG------CCGAGTCTGACGCC i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1313501 199 - 2164891 CCCTTTCCAGTTCTCTATCTGCAGTGCCTGTCTCAGGACCCACCA--------CTAACCTCCCTTCTGTCTTCCATTTCTGAAGGCAGGTTCCATAGGTGGGAACCATCTCTGTGAA-GGGGAGGCT-GCAATGCT-ACCATGAAGAAAGACCAGGAATGGCTTCTTGGAAAACACAGCCAGTCCAGGTGCCACTTCCGAGTCTGATGCT i cebCap1.NW_016107695v1 I 36 C 0 s aotNan1.NW_018494782v1 1558719 194 - 1813869 CCCTTCCCGGTTCTCCACCTGCAGCGTCCGTCTCGGGACCCCCCA--------CCAACCTCCC-TCTGTCCTCCGTTTCTGAAGCCAAGTTCCTTAGGTGGGAACCATCTCTGTGAA-GGGGAGGCT-GCAACGGC-GCCACGAAGAAAGACCGGGAACGGCTTCTTGGAAA--ACAGCCAGGCCAGGCGCCACTTCCGAG--TGATGCT i aotNan1.NW_018494782v1 I 106 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e dasNov3.JH569188 645067 22 + 760995 I e canFam3.chr1 56219018 1281 + 122678785 I a score=1131274.000000 s hg38.chr6_KB021644v2_alt 160074 126 + 185823 TTTGACAACATCCTTCCGGTCTCCTTCCATCTTCTGCTCCTTCCTCTTCCCTCTGCC--GAATTTTGCTCTTCTGCAGTTCTTGAGGCACATTTTAGGCCCTGACCAATAAA-GACGTAAACAAGCACA s panTro5.chr6 1781049 126 - 175400573 TTTGACAACATCCTTCCGGTCTCCTTCCATCTTCTGCTCCTTCCTCTTCCCTCTGCC--GAATTTTGCTCTTCTGCAGTTCTTGAGGCACATTTTAGGCCCCGACCAATAAA-GACGTAAACAAGCACA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171850148 126 + 173848474 TTTGACAACATCCTTCCGGTCTCCTTCCATCTTCTGCTCCTTCCTCTTCCCTCTGCC--GAATTTTGCTCTTCTGCAGTTCTTGAGGCACATTTTAGGCCCCGACCAATAAA-GATGTAAACAAGCACA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11533232 126 - 12463322 TTTGACAACATCCTTCCGGTCTCCTTCCATCTTCTGCTCCTTCCTCTTCCCTCTGCC--GAATTTTGCTCTTCCGCAGTTCTTGAGGCACATTTTAGGCCCTGACCAATAAA-GACGTAAACAAGCACA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156365527 128 + 157873769 TTTGACAACATCCTTCCAGTCTCCTTCCATCTTCTGCTCCTTCCTCTTCCCTCTGCCGAGAATTTTGCTCTTCTGCAGTTCTTGAGGCACATTTTAGGCCCTGACCAACAAA-GACGTAAACTAGCACA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170393705 117 + 172585720 -TTGTCAACATA-TTCCAGTCTCCTTCCATC-TCTGCTCCTTC--TCTTCCTCTGCG--AA----TGCTCTTCCGCAGTTCTTGAGGCACATTTTAGGCCCCGACCAACAAA-GACTTAAACAAGCACA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169136979 126 - 170955103 TTTGTCAACATATTTCCAGTCTCCTTCCATCTTCTGCTCCTTCCTCTTCCCTCTGCC--GAATTTTGCTCTTCCGCAGTTCTTGAGGCACATTTTAGGCCCCGACCAACAAA-GACTTAAACAAGCACA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8423333 126 + 10161646 TTTGTCAACATATTTCCAGTCTCCTTCCATCTTCTGCTCCTTCCTCTTCCCTCTGCC--GAATTTTGCTCTTCCGCAGTTCTTGAGGCACATTTTAGGCCCGGACCAACAAA-GACTTAAACAAGCACA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1453718 126 + 3144229 TTTGTCAACATATTTCCAGTCTCCTTCCATCTTCTGCTCCTTCCTCTTCCCTCTGCC--GAATTTTGCTCTTCCGCAGTTCTTGAGGCACATTTTAGGCCCCGACCAACAAA-GACTTAAACAAGCACA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96738988 126 + 98384682 TTTGTCAACATATTTCCAGTCTCTTTCCATCTTCTGCTCCTTCCTCTTCCCTCTGCC--GAATTTTGCTCTTCCGCAGTTCTTGAGGCACATTTTAGGCCCTGACCAACAAA-GACTTAAACAAGCACA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8294774 126 - 10857215 TTCGTCAACATATTTCCAGTCTCCTTCCATCTTCTGCTCCTTCCTCTTCCCTCTGCC--GAATTTTGCTCTTCCGCAGTTCTTGAGGCACATTTTAGGCCCTGACCAACAAA-GACTTAAACAAGCACA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15664941 126 - 23502949 TTTGTCAGTATGTTTCCAGTCTCCTTCCCTCTTCTGCTCCTTCCTCTTCCCTCTGCC--GAATTTTGCTCTTCTGCAGTTCTTGAGGCACATTTTAGGCCCTGACCAACAAA-GACTTAAACAAGCACA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169948340 124 + 171630274 TTGGACGACGTCCTTCCCGTCTCCTTCCATCTTCTGCTCCTTC-TCTTCACTCTGCT--GAGTTTTGCTCTTCTGCAGTTCTGGGGGCACATTTTAGTCCCTGACCAACAAA-GAGGT-AACCAGCACC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1347298 124 - 2905041 TTTGACGATATCCTTCCCGTCTCCTTCCATCTCCTGCTCTTTG-TCTCCGCTCTGCC--GAGGTGTGCTCTTCTCCGGTTCTGCAGGCACATTTTAGGCCCTGACCAACAAA-GAGGT-AACCCACACC i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1313700 123 - 2164891 TTTGACGACGTCCTTCCTGTCTCCTTCCATCTTCTGCTCCTTC-TCTTTGCTCTGCC--GAATTTTGCTCTTCTCCAGTTCTGGAGGCACATTTTAGG-CCTGACCAACAAA-GAGGT-AACCCACACC i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1558913 108 - 1813869 TTTGACGACGTCCTTCCCACCTCCTTC-----------------TCTTCGCTCTGCC--GAATTTTGCTCTTCTGCAGTTCTGGGGGCACATTTTAGGCCCCGACCAACAAA-GAGGT-AACCAGCACC i aotNan1.NW_018494782v1 C 0 C 0 s dasNov3.JH569188 645089 126 + 760995 TTTAACAATTCTGCTCCAAT-TCCTTTCTTCTTCTGCTCCTTCATTTTTCCTCAGCT--GAATTTTCTTCTTTTGTAAACCTTGAAACATATTCTAGATGTTTGCCAAGAAATGTAGCAAGCAAGCAAA i dasNov3.JH569188 I 22 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e canFam3.chr1 56219018 1281 + 122678785 I a score=2412827.000000 s hg38.chr6_KB021644v2_alt 160200 233 + 185823 AGCGGAAAACAAAACTAGCTTAACGAGTTCACTGCTAATTATTGCCTGTTAGCATGAAAAGAATAGCACAATTCTTCACATTTTTGGTTAAGGAAACGTTACCCACACATTCATATGTAAATTGATTCTGACCAAATTGTTTGGA----GTGGGAATTTTAG-TTTATCTGTGAGCA--------CTGTCTCTCAGGGGCT-GAGAATGAGCCCAGCAATGG-GAACCATCGCATGCAGGAacacaca s panTro5.chr6 1781175 233 - 175400573 AGCGGAAAACAAAACTAGCTTAACGAGTTCACTGCTAATTATTGCCTGTTAGCATGAAAGGAATAGCATAATTCTTCACATTTTTGGTTAAGGAAACATTACCCACACATTCATATGTAAATTGATACTGACCAAATTGTTTGGA----GTGGGAATTTTAG-TTTATCTGTGAGCA--------CTGTCTCTCACGGGCT-GAGAATGAGCCCAGCAATGG-GAACCATCGCATGCAGGAacacaca i panTro5.chr6 C 0 C 0 s panPan2.chr6 171850274 233 + 173848474 AGCGGAAAACAAAACTAGCTTAACGAGTTCACTGCTAATTATTGCCTGTTAGCATGAAAGGAATAGCATAATTCTTCACATTTTTGGTTAAGGAAACATTACCCACACATTCATATGTAAATTGATACTGACCAAATTGTTTGGA----GTGGGAATTTTAG-TTTATCTGTGAGCA--------CTGTCTCTCACGGGCT-GAGAATGAGCCCAGCAATGG-GAACCATCGCATGCAGGAacacaca i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11533358 233 - 12463322 AGTGGAAAACAAAACTAGCTTAACCAGTTCACTGCTAATTATTGCCTGTTAGCATGAAAAGAATAGCACAATTCTTCACATTTTTGGTTAAGGAAACATTACCCACACATTCATATGTAAATTGATTCTGACCAAATTGTTTGGA----GTGGGAATTTTAG-TTTATCTGTGAGCA--------CTGTCTCTCAGGGGCT-GAGAATCAGCCCAGCAATGG-GAACTATTGCATGCAGGAacacaca i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156365655 233 + 157873769 AGGGGAAAACAAAACTAGCTTAACCAGTTCGCTGCTAATTATTGCCTGTTAGCATGAAAAGAATAGCACAATTCTTCACACTTTTGGTTAAGGAAACATTACCCACACATTCACATGTAAATTGATTCTGACCAAATTGTCTGGA----GTGGGAATTTTAG-TTTATCTGTGAGCA--------CTGTCTCTCAGGGGCT-GAGAATGAGCCCAGCAGTGG-GCACCATCGCATGCAGGAacacaca i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170393822 233 + 172585720 AGGGGAAAACAAAACTAGCTTAACCAGTTCACTGCTAATTATTGCCTGTTAGCATGAGAAGAAGAGCACAATTCTTCACATTTTTGGTTAAGGAAACGTTACCCACACATTCACATGTAAATTGATTCTGACCAGATTGTTTGGA----GTGGGAATTTTAG-CTCAGCTGTGAGCA--------CTGTCTCTCAGGGGCT-GAGAATGAGCCCAGCAATGG-GCACCATCACATGCAGGAacacaca i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169137105 233 - 170955103 AGGGGAAAACAAAACTAGCTTAACCAGTTCACTGCTAATTATTGCCTGTTAGCATGAGAAGAAGAGCACAATTCTTCACATTTTTGGTTAAGGAAACGTTACCCACACATTCACATGTAAATTGATTCTGACCAAATTGTTTGGA----GTGGGAATTTTAG-CTCAGCTGTGAGCA--------CTGTCTCTCAGGGGCT-GAGAATGAGCCCAGCAATGG-GCACCATCACATGCAGGAacacaca i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8423459 233 + 10161646 AGGGGAAAACAAAACTAGCTTAACCAGTTCACTGCTAATTATTGCCTGTTAGCATGAGAAGAAGAGCACAATTCTTCACATTTTTGGTTAAGGAAACGTTACCCACACATTCACATGTAAATTGATTCTGACCAAATTGTTTGGA----GTGGGAATTTTAG-CTCAGCTGTGAGCA--------CTGTCTCTCAGGGGCT-GAGAATGAGCCCAGCAATGG-GCACCATCACATGCAGGAacacaca i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1453844 233 + 3144229 AGGGGAAAACAAAACTAGCTTAACCAGTTCACTGCTAATTATTGCCTGTTAGCATGAGAAGAAGAGCACAATTCTTCACATTTTTGGTTAAGGAAATGTTACCCACACATTCACATGTAAATTGATTCTGACCAAATTGTTTGGA----GTGGGAATTTTAG-TTCAGCTGTGAGCA--------CTGTCTCTCAGGGGCT-GAGAATGAGCCCAGCAATGG-GCACCATCACATGCAGGAacacaca i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96739114 229 + 98384682 AGGGGAAAACAAAACTAGCTTAACCAGTTCACTGCTAATTATTGCCTGTTAGCATGAGAAGAAGAGCACAATTCTTCACATTTTTGGTTAAGGAAAGGTTACCCACACATTCACATGTAAATTGATTCTGACCAAA----TTGGA----GTGGGAATTTTAG-TTTATCTGTGAGCA--------CTGTCTCTCAGGGGCT-GAGAATGAGCCCAGCAATGG-GCACCATCACATGCAGGAacacaca i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8294900 233 - 10857215 AGGGGAAAACAAAACTAGCTTAACCAGTTCACTGCTAATTATTGCCTGTTAGCATGAGAAGAAGAGCACAATTCTTCACATTTTTGGTTAAGGAAACGTTACCCACACATTCACATGTAAATTGATTCTGACCAAATTGTTTGGA----GTGGGAATTTTAG-TTCAGCTGTGAGCA--------CTGTCTCTCAGGGGCT-GAGAATGAGCCCAGCAATGG-GCACCATCACATGCAGGAacacaca i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15665067 237 - 23502949 AGGGGAAAACAAAACTAGCTTAACCAGTGCACTGCTAATTATTGCCTGTTAGCACGAGAAGAAGAGCACAATTCTTCACATTTTTGGTTGAGGAAACATTACCCACACATTCACATGTAAACTGATTCTGACCAAATTGTTTGGAGTGGGTGGGAATTTTAG-TTTAGCTGTGAGCA--------CTGTCTCTCAGGGGCT-GAGAATGAGCCCAGCAATGG-GCACCATCACATGCAGGAacacaca i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169948464 231 + 171630274 AGGC--AGACAAAGCTAGCGCGATCCGTTCACTGCTGATCATCGCCCGTTAGCATGAAAAGAGCAGCAGAGTTCTTCACATTTTTGGTTAAGGAAACTTTACCCGCACATTCACATGTGAGTCAATTCTGACCAAATTGTTTGGA----GTGGGAATTTTAG-TTTATCTGTGAGCA--------CTGTCTCCCAGGGGCT-GGGAAGGAGCCCAACGATGG-GTACCATTGTATGCAGAAacacaca i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1347422 231 - 2905041 AGGG--AAACGAAGCTGGCGCGAGCCGTTCGCTGCTAATCATTGCCTGTTAGCACGAAAACAGCAGCATGATTCTCCACATTTTTGGTTATGGAAACTTTACCTGCACATTCACAAGGGAGTCGATTCTGACCAAATTGTTTGGA----GTGGGAATTTTAG-CTTATCTGTGAGCA--------CCGTCTCCCAGGGGCT-GGGAAGGAGCCCAGCAATGG-GCACCATCACATGTGGAAacacaca i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1313823 231 - 2164891 AGGG--AAACAAAGCCAGCGCGATCCGTTCACTGCTAATCATCGCCTGTTAGCATGAAAAGAACAGCACAATTCTTCACATTTTTGGTTAAGGAAACTTTATCCGCACATTCACATGTGAGTCGATTCTGACCAAATTGTTTGGA----GTGGGAATTTTAG-TTTATCTTTAAGCA--------CTGTCCCCCAGGGGCT-GGGAAGGAGCCCAGCAATGG-GCACCATTGCATGCAGAAACGCACA i cebCap1.NW_016107695v1 C 0 I 105 s aotNan1.NW_018494782v1 1559021 231 - 1813869 AGGG--AAACAGAGCCAGCGCCATCCGTTCACTGCTGATCACCGCCGGTTAGCATGAAAACGACAGCACAATTCTTCACATTTGTGGTTAAGGAAACTTTACCCACACGTTCACATGCGAGTCGATTCTGACCAAATTGTTTGGA----GCGGGAATTTTAG-TTTATCTGTGAGCA--------CCGTCTCCCAGGGGCT-GCGAAGGAGCCCAGCAATGG-GCACCATCGCGTGCGGAAacacaca i aotNan1.NW_018494782v1 C 0 C 0 s canFam3.chr1 56220299 220 + 122678785 AGGAGGGAGCAAAGCCAGTGCAGCCAGCTTATTGCT-CTCATTGCCTGCAAGTGTGCACAG--TAACAAAACTCCTCACATGCTGGGTTA-GCACTAATTACCCACACATTGACACGTGAATTCATTCTGACCGGATTAGTTTAA----GTGAAAATTTTAGTTTTATCAGAGAGCATAATGTCCCTGTCCCTTGGGGGTT-GG----------AGCA---------CATCTcacacacacatatact i canFam3.chr1 I 1281 I 2 s dasNov3.JH569188 645215 229 + 760995 AGAGGGGGAAAAAAT--GTTTAACCAGTTTACTGCTTTTGATTTCCTGGTAGCCTTACCA-AATAACAAAATACTTCAGATTTTTGGTCATAGAATCATTACCCAAATGTTCACA------TTTATTTTTACCAAGTTAGTAGAA----GTGGCAGTTTTGG-TTTATTTGAGAGCA-AAGTTGACTATTTCTTAGGAGATAGGGAGAGAGTCCTAAAATGGAGTACCATCTCA----AAAacacaca i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I a score=28275.000000 s hg38.chr6_KB021644v2_alt 160433 11 + 185823 cccgcaacac-a s panTro5.chr6 1781408 11 - 175400573 cccgcaacac-a i panTro5.chr6 C 0 C 0 s panPan2.chr6 171850507 11 + 173848474 cccgcaacac-a i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11533591 11 - 12463322 cccgcaacac-a i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156365888 11 + 157873769 cctgcaacac-a i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170394055 11 + 172585720 cctgcaatgc-a i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169137338 11 - 170955103 cctgcaatgc-a i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8423692 11 + 10161646 cctgcaatgc-a i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1454077 11 + 3144229 cctgcaacac-a i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96739343 11 + 98384682 cctgcaacac-a i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8295133 11 - 10857215 cctgcaatgc-a i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15665304 11 - 23502949 cttgcaacac-a i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169948695 10 + 171630274 cccacgacac-- i calJac3.chr4 C 0 I 1 s saiBol1.JH378287 1347653 8 - 2905041 ccctcg--ac-- i saiBol1.JH378287 C 0 I 1 s aotNan1.NW_018494782v1 1559252 11 - 1813869 cccacgacaca- i aotNan1.NW_018494782v1 C 0 I 473 s canFam3.chr1 56220521 9 + 122678785 cccccacca--- i canFam3.chr1 I 2 I 2 s dasNov3.JH569188 645444 6 + 760995 cacaca------ i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e cebCap1.NW_016107695v1 1314054 105 - 2164891 I a score=25437.000000 s hg38.chr6_KB021644v2_alt 160444 8 + 185823 --gacacatg s panTro5.chr6 1781419 8 - 175400573 --cacacatg i panTro5.chr6 C 0 C 0 s panPan2.chr6 171850518 8 + 173848474 --cacacatg i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11533602 8 - 12463322 --cacacatg i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156365899 8 + 157873769 --cacacatg i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170394066 6 + 172585720 --cacaca-- i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169137349 6 - 170955103 --cacaca-- i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8423703 6 + 10161646 --cacaca-- i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1454088 6 + 3144229 --cacatg-- i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96739354 6 + 98384682 --cacacg-- i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8295144 6 - 10857215 --cacaca-- i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15665315 6 - 23502949 --cacatg-- i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169948706 6 + 171630274 --cacacg-- i calJac3.chr4 I 1 C 0 s saiBol1.JH378287 1347662 6 - 2905041 --cacacg-- i saiBol1.JH378287 I 1 C 0 s canFam3.chr1 56220532 6 + 122678785 --cacaca-- i canFam3.chr1 I 2 C 0 s dasNov3.JH569188 645450 8 + 760995 aacgcaag-- i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e aotNan1.NW_018494782v1 1559263 473 - 1813869 I e cebCap1.NW_016107695v1 1314054 105 - 2164891 I a score=155275.000000 s hg38.chr6_KB021644v2_alt 160452 29 + 185823 catgcaaacacagcagcacgtacacatgc s panTro5.chr6 1781427 29 - 175400573 catgcaaacacagcagcacgtacacatgc i panTro5.chr6 C 0 C 0 s panPan2.chr6 171850526 29 + 173848474 catgcaaacacagcagcacgtacacatgc i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11533610 29 - 12463322 catgcaaagacagcaacatgtacacatgc i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156365907 8 + 157873769 catgcaaa--------------------- i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170394072 29 + 172585720 cacgcaaacacagcaacacatacacatgt i rheMac8.chr4 C 0 I 5 s macFas5.chr4 169137355 29 - 170955103 cacgcaaacacagcaacacatacacatgc i macFas5.chr4 C 0 I 5 s macNem1.NW_012011000v1 8423709 29 + 10161646 cacgcaaacacagcaacacatacacatgc i macNem1.NW_012011000v1 C 0 I 5 s cerAty1.NW_012002071v1 1454094 29 + 3144229 cacacaaacacagcaacacatacacatgc i cerAty1.NW_012002071v1 C 0 I 5 s chlSab2.chr13 96739360 29 + 98384682 cacacaaacacagcaacacatacacatgc i chlSab2.chr13 C 0 I 5 s manLeu1.NW_012106474v1 8295150 29 - 10857215 cacgcaaacacagcaacacatacacatgc i manLeu1.NW_012106474v1 C 0 I 5 s colAng1.NW_012114488v1 15665321 29 - 23502949 catgtaaacacagcaacacacacacatgc i colAng1.NW_012114488v1 C 0 I 444 s calJac3.chr4 169948712 29 + 171630274 cacacagacacaGCAATGCCTATAAATGT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1347668 29 - 2905041 cacgcagacacagcaatgcgtacaaatgt i saiBol1.JH378287 C 0 C 0 s canFam3.chr1 56220538 7 + 122678785 catggaa---------------------- i canFam3.chr1 C 0 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e aotNan1.NW_018494782v1 1559263 473 - 1813869 I e cebCap1.NW_016107695v1 1314054 105 - 2164891 I e dasNov3.JH569188 645458 0 + 760995 C a score=181120.000000 s hg38.chr6_KB021644v2_alt 160481 65 + 185823 aacgc-----tacacacaatgtgcacaatgcacacacacatgcatacaagcacagcaacacgt---------------acacatg s panTro5.chr6 1781456 65 - 175400573 aacac-----tacacacaatgtgcacaatgcacacacacatgcacacaagcacagcaacacgt---------------acacatg i panTro5.chr6 C 0 C 0 s panPan2.chr6 171850555 65 + 173848474 aacac-----tacacacaatgtgcacaatgcacacacacatgcacacaagcacagcaacacgt---------------acacatg i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11533639 65 - 12463322 aacac-----tacacacaatgtgcacaatgcacacacacatgcacacaaggacagcaacacag---------------acacatg i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156365915 20 + 157873769 --------------------------------------------------cacagcaacacgt---------------acacctg i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170394106 63 + 172585720 aacacagacacacacacggtgtgcatgatgcacacacacatgtacacaaggacaac----------------------acacacg i rheMac8.chr4 I 5 C 0 s macFas5.chr4 169137389 63 - 170955103 aacacagacacacacacggtgtgcatgatgcacacacacatgtacacaaggacaac----------------------acacacg i macFas5.chr4 I 5 C 0 s macNem1.NW_012011000v1 8423743 63 + 10161646 aacacagacacacacacggtgtgcatgatgcacacacacatgtacacaaggacaac----------------------acacacg i macNem1.NW_012011000v1 I 5 C 0 s cerAty1.NW_012002071v1 1454128 61 + 3144229 aacacagacacacacacagtgtgcatgatg--cacacacatgtacacaaggacaac----------------------acacacg i cerAty1.NW_012002071v1 I 5 C 0 s chlSab2.chr13 96739394 61 + 98384682 aacacagacacacacacagtgtgcatgatg--cacacacatgtacacaaggacaac----------------------acacacg i chlSab2.chr13 I 5 C 0 s manLeu1.NW_012106474v1 8295184 61 - 10857215 aacacagacacacacacagtgtgcatgatg--cacacacatgtacacaaggacaac----------------------acacacg i manLeu1.NW_012106474v1 I 5 C 0 s calJac3.chr4 169948741 67 + 171630274 GACCC-----cacacac----------atg--cacacacatgcacacaa-cacagcaacatgtacacatataccacacacacatg i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1347697 49 - 2905041 gaccc-----gacaca----------------cacacatgtacacacaagcacatcaacatgt---------------acacatg i saiBol1.JH378287 C 0 C 0 s canFam3.chr1 56220545 34 + 122678785 ----------tacacgca---tacacaatacatgtatacacacatac-------------------------------------- i canFam3.chr1 C 0 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e aotNan1.NW_018494782v1 1559263 473 - 1813869 I e cebCap1.NW_016107695v1 1314054 105 - 2164891 I e dasNov3.JH569188 645458 0 + 760995 C e colAng1.NW_012114488v1 15665350 444 - 23502949 I a score=351782.000000 s hg38.chr6_KB021644v2_alt 160546 92 + 185823 cg-----acaccacacacac--atacagtgt-gcacagtgcacacacac------------gcacacaaggacagcaacacagacacatgtgacac--cacacacaca---tgc-aca s panTro5.chr6 1781521 92 - 175400573 cg-----acaccacacacac--atacagtgt-gcacagtgcacacacac------------gcacacaaggacagcaacacagacacatgtgacac--cacacacaca---tgc-aca i panTro5.chr6 C 0 C 0 s panPan2.chr6 171850620 92 + 173848474 cg-----acaccacacacac--atacagtgt-gcacagtgcacacacac------------gcacacaaggacagcaacacagacacatgtgacac--cacacacaca---tgc-aca i panPan2.chr6 C 0 C 0 s nomLeu3.chr3 156365935 92 + 157873769 tg-----acaccacacacac----acagtgt-gcacaatgcacacacac------------gcacacaagcacaccaacacgtacatgtgtgacaccacacacacaca---tgc-aca i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170394169 97 + 172585720 tg-----acaccacacacatgaacacagtgt-gcacgatgcacacacac----------atgcacacaagcacagcaacacgtaca--tgtgacac--cacacacacagtctgc-aca i rheMac8.chr4 C 0 I 27 s macFas5.chr4 169137452 97 - 170955103 tg-----acaccacacacatgaacacagtgt-gcacgatgcacacacac----------atgcacacaagcacagcaacacgtaca--tgtgacac--cacacacacagtctgc-aca i macFas5.chr4 C 0 I 3 s macNem1.NW_012011000v1 8423806 97 + 10161646 tg-----acaccacacacatgaacacagtgt-gcacgatgcacacacac----------atgcacacaagcacagcaacacataca--tgtgacac--cacacacacagtctgc-aca i macNem1.NW_012011000v1 C 0 I 27 s cerAty1.NW_012002071v1 1454189 97 + 3144229 tg-----acaccacacacatgaacacagtgt-gcacgatgcacacacac----------atgcacacaagcacagcaacacgtacg--tgtgacac--cacacacacagtctgc-aca i cerAty1.NW_012002071v1 C 0 I 46 s chlSab2.chr13 96739455 97 + 98384682 tg-----acaccacacacatgaacacagtgt-gcacgatgcacacacac----------atgcacacaagcacagcaacacgtaca--tgtgacac--cacacacacagtctgc-aca i chlSab2.chr13 C 0 I 15 s manLeu1.NW_012106474v1 8295245 97 - 10857215 tg-----acaccacacacatgaacacagtgt-gcacgatgcacacacac----------atgcacacaagcacagcaacacataca--tgtgacac--cacacacacagtctgc-aca i manLeu1.NW_012106474v1 C 0 I 27 s calJac3.chr4 169948808 94 + 171630274 cacacaaacacagca-acatgtacac-atgcaacaccacacacacacaa--------------acacaaacacaGCAACACATACATATGTGACAC--CGTACACA-----TGC-ACA i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1347746 104 - 2905041 -------acaccacacacatgcacacaacacagcaccacatacacatgataccacacacatgcacacaaacacagcaacacgtacacatgcaacac--cacacaca-----cacaaca i saiBol1.JH378287 C 0 C 0 s canFam3.chr1 56220579 48 + 122678785 -----------caatcacat------------gcaggttgcatgcacac------------acatac-----------cactcaca------------cacacata------------ i canFam3.chr1 C 0 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e aotNan1.NW_018494782v1 1559263 473 - 1813869 I e cebCap1.NW_016107695v1 1314054 105 - 2164891 I e dasNov3.JH569188 645458 0 + 760995 C e colAng1.NW_012114488v1 15665350 444 - 23502949 I e gorGor5.CYUI01015032v1 11533704 0 - 12463322 C a score=27845.000000 s hg38.chr6_KB021644v2_alt 160638 21 + 185823 caagcacagcgacacatacac s panTro5.chr6 1781613 21 - 175400573 caagcacagcgacacatacac i panTro5.chr6 C 0 C 0 s panPan2.chr6 171850712 21 + 173848474 caagcacagcgacacatacac i panPan2.chr6 C 0 C 0 s nomLeu3.chr3 156366027 21 + 157873769 caagcacagcaacacatacac i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169137552 15 - 170955103 cacac------acacatacac i macFas5.chr4 I 3 C 0 s chlSab2.chr13 96739567 21 + 98384682 cacacacagcaacacatacac i chlSab2.chr13 I 15 I 9 s calJac3.chr4 169948902 20 + 171630274 C-AACACAGCAACATGTACAC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1347850 21 - 2905041 caaacacagcaacacatatat i saiBol1.JH378287 C 0 C 0 s canFam3.chr1 56220627 2 + 122678785 ------------ca------- i canFam3.chr1 C 0 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e aotNan1.NW_018494782v1 1559263 473 - 1813869 I e cebCap1.NW_016107695v1 1314054 105 - 2164891 I e dasNov3.JH569188 645458 0 + 760995 C e colAng1.NW_012114488v1 15665350 444 - 23502949 I e cerAty1.NW_012002071v1 1454286 46 + 3144229 I e manLeu1.NW_012106474v1 8295342 27 - 10857215 I e macNem1.NW_012011000v1 8423903 27 + 10161646 I e rheMac8.chr4 170394266 27 + 172585720 I e gorGor5.CYUI01015032v1 11533704 0 - 12463322 C a score=-3452.000000 s hg38.chr6_KB021644v2_alt 160659 11 + 185823 gagatacaatg s panTro5.chr6 1781634 11 - 175400573 gagatacaatg i panTro5.chr6 C 0 C 0 s panPan2.chr6 171850733 11 + 173848474 gagatacaatg i panPan2.chr6 C 0 C 0 s nomLeu3.chr3 156366048 7 + 157873769 aaaagac---- i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169137567 8 - 170955103 ---acacagca i macFas5.chr4 C 0 I 1 s calJac3.chr4 169948922 8 + 171630274 ---ATGTGACA i calJac3.chr4 C 0 I 1 s saiBol1.JH378287 1347871 8 - 2905041 ---gtacaaca i saiBol1.JH378287 C 0 I 3 s canFam3.chr1 56220629 2 + 122678785 ----tt----- i canFam3.chr1 C 0 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e aotNan1.NW_018494782v1 1559263 473 - 1813869 I e cebCap1.NW_016107695v1 1314054 105 - 2164891 I e dasNov3.JH569188 645458 0 + 760995 C e colAng1.NW_012114488v1 15665350 444 - 23502949 I e chlSab2.chr13 96739588 9 + 98384682 I e cerAty1.NW_012002071v1 1454286 46 + 3144229 I e manLeu1.NW_012106474v1 8295342 27 - 10857215 I e macNem1.NW_012011000v1 8423903 27 + 10161646 I e rheMac8.chr4 170394266 27 + 172585720 I e gorGor5.CYUI01015032v1 11533704 0 - 12463322 C a score=35603.000000 s hg38.chr6_KB021644v2_alt 160670 17 + 185823 cacacacacaca---tgcgc- s panTro5.chr6 1781645 14 - 175400573 --cacacacaca---tgcg-- i panTro5.chr6 C 0 C 0 s panPan2.chr6 171850744 14 + 173848474 --cacacacaca---tgcg-- i panPan2.chr6 C 0 C 0 s nomLeu3.chr3 156366055 18 + 157873769 --cacacatacagtgtgcac- i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170394293 14 + 172585720 --cacatacaca---tatg-- i rheMac8.chr4 I 27 I 5 s macFas5.chr4 169137576 14 - 170955103 --cacatacaca---tatg-- i macFas5.chr4 I 1 I 5 s macNem1.NW_012011000v1 8423930 14 + 10161646 --cacatacaca---tatg-- i macNem1.NW_012011000v1 I 27 I 5 s chlSab2.chr13 96739597 14 + 98384682 --cacatacaca---tatg-- i chlSab2.chr13 I 9 I 5 s manLeu1.NW_012106474v1 8295369 14 - 10857215 --cacatacaca---tatg-- i manLeu1.NW_012106474v1 I 27 I 5 s calJac3.chr4 169948931 16 + 171630274 cacacacacaaa---aaca-- i calJac3.chr4 I 1 I 5 s saiBol1.JH378287 1347882 16 - 2905041 cacacacacaca---aaca-- i saiBol1.JH378287 I 3 I 5 s canFam3.chr1 56220631 17 + 122678785 tatatagactca---tgca-c i canFam3.chr1 C 0 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e aotNan1.NW_018494782v1 1559263 473 - 1813869 I e cebCap1.NW_016107695v1 1314054 105 - 2164891 I e dasNov3.JH569188 645458 0 + 760995 C e colAng1.NW_012114488v1 15665350 444 - 23502949 I e cerAty1.NW_012002071v1 1454286 46 + 3144229 I e gorGor5.CYUI01015032v1 11533704 0 - 12463322 C a score=117297.000000 s hg38.chr6_KB021644v2_alt 160687 39 + 185823 a---cacaca------------cat---gca--caca--cacagcaacacatacacatgtg s panTro5.chr6 1781659 38 - 175400573 ----ggcaca------------cat---gca--caca--cacagcaacacatacacatgtg i panTro5.chr6 C 0 C 0 s panPan2.chr6 171850758 38 + 173848474 ----cgcaca------------cat---gca--caca--cacagcaacacatacacatgtg i panPan2.chr6 C 0 C 0 s nomLeu3.chr3 156366073 44 + 157873769 aattcacaca------------cat---acatgcaga--cacagcaacacatacacatgtg i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170394312 40 + 172585720 ---acacaca------------cat---gca--cacaagcacagcaacatgta-acatgtg i rheMac8.chr4 I 5 C 0 s macFas5.chr4 169137595 40 - 170955103 ---acacaca------------cat---gca--cacaagcacagcaacatgta-acatgtg i macFas5.chr4 I 5 C 0 s macNem1.NW_012011000v1 8423949 40 + 10161646 ---acacaca------------cat---gca--cacaagcacagcaacatgta-acatgtg i macNem1.NW_012011000v1 I 5 C 0 s cerAty1.NW_012002071v1 1454332 40 + 3144229 ---acacaca------------cat---gca--cacaagcacggcaacatgta-acatgtg i cerAty1.NW_012002071v1 I 46 C 0 s chlSab2.chr13 96739616 38 + 98384682 ---acacaca------------cat---gca--cacaagcacagcaacatgta-ac--gtg i chlSab2.chr13 I 5 C 0 s manLeu1.NW_012106474v1 8295388 40 - 10857215 ---acacata------------cat---gca--cacaagcacagcaacatgta-acatgtg i manLeu1.NW_012106474v1 I 5 C 0 s calJac3.chr4 169948952 53 + 171630274 ---acacatatacatgtgataccac---aca--cacaaacatatcaacacatgcacatgtg i calJac3.chr4 I 5 C 0 s saiBol1.JH378287 1347903 53 - 2905041 ---ACACTTACAAGTCTGacaccac---aca--cacaaacatatcaacacatgcacatgtg i saiBol1.JH378287 I 5 C 0 s canFam3.chr1 56220648 24 + 122678785 -------aca------------caTCTAGCA--CAC-----CAGTAACAT----------- i canFam3.chr1 C 0 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e aotNan1.NW_018494782v1 1559263 473 - 1813869 I e cebCap1.NW_016107695v1 1314054 105 - 2164891 I e dasNov3.JH569188 645458 0 + 760995 C e colAng1.NW_012114488v1 15665350 444 - 23502949 I e gorGor5.CYUI01015032v1 11533704 0 - 12463322 C a score=166736.000000 s hg38.chr6_KB021644v2_alt 160726 42 + 185823 acaccacacac--gcacgcacagtgtgcatgatgcacacacacg s panTro5.chr6 1781697 36 - 175400573 acaccacacac--gcacgcacagtgtgcatgatgcaca------ i panTro5.chr6 C 0 C 0 s panPan2.chr6 171850796 34 + 173848474 acaccacacac--gcacg--cagtgtgcatgatgcaca------ i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11533704 40 - 12463322 acaccagacac--gcacgcacagtgtgcatgatgcaca--cacg i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156366117 44 + 157873769 acaccacacacatgcacgcacagtgtggatgatgcacacacacg i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170394352 38 + 172585720 acaccacacac--gca----cagtgtgcgtgatgcacacataca i rheMac8.chr4 C 0 I 8 s macFas5.chr4 169137635 38 - 170955103 acaccacacac--gca----cagtgtgcgtgatgcacacataca i macFas5.chr4 C 0 I 8 s macNem1.NW_012011000v1 8423989 38 + 10161646 acaccacacac--gca----cagtgtgcgtgatgcacacataca i macNem1.NW_012011000v1 C 0 I 8 s cerAty1.NW_012002071v1 1454372 38 + 3144229 acaccacacac--aca----cagtgtgcgtgatgcacacataca i cerAty1.NW_012002071v1 C 0 I 8 s chlSab2.chr13 96739654 38 + 98384682 acaccacacac--gca----cagtgtgcgtgatgcacacataca i chlSab2.chr13 C 0 I 8 s manLeu1.NW_012106474v1 8295428 38 - 10857215 acaccacacac--gca----cagtgtgcgtgatgcacacataca i manLeu1.NW_012106474v1 C 0 I 8 s calJac3.chr4 169949005 40 + 171630274 actccacacac--ataca--cggtatccacaatgcacacacaca i calJac3.chr4 C 0 I 6 s saiBol1.JH378287 1347956 40 - 2905041 actccacacac--attca--ctgtatccatgatgaacacacaca i saiBol1.JH378287 C 0 I 6 s canFam3.chr1 56220672 26 + 122678785 ---TCATGCAC--AGACT--CACATTTCATGAT----------- i canFam3.chr1 C 0 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e aotNan1.NW_018494782v1 1559263 473 - 1813869 I e cebCap1.NW_016107695v1 1314054 105 - 2164891 I e dasNov3.JH569188 645458 0 + 760995 C e colAng1.NW_012114488v1 15665350 444 - 23502949 I a score=255421.000000 s hg38.chr6_KB021644v2_alt 160768 50 + 185823 cacgcacagcaacacgtacacatgtgacac----------cacgcacagtgtgcacagtg s panTro5.chr6 1781733 50 - 175400573 ----cacagcaacatgtacacatgtgacac------cacacacgcacagtgtgcacagtg i panTro5.chr6 C 0 C 0 s panPan2.chr6 171850830 50 + 173848474 ----cacagcaacatgtacacatgtgacac------cacacacgcacagtgtgcacagtg i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11533744 56 - 12463322 cacacacatcaacatgtacacatgtgacac----cacacacacgcacagtgtgcacagtg i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156366161 28 + 157873769 cacacacagcaacatgtacac--gtgatac------------------------------ i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170394398 60 + 172585720 cacacacagcagcacatacacatgtgacaccacacacatgcacgcacagtgtgcacagtg i rheMac8.chr4 I 8 C 0 s macFas5.chr4 169137681 60 - 170955103 cacacacagcagcacatacacatgtgacaccacacacatgcacgcacagtgtgcacagtg i macFas5.chr4 I 8 C 0 s macNem1.NW_012011000v1 8424035 60 + 10161646 cacacacagcagcacatacacatgtgacaccacacacatgcacgcacagtgtgcacagtg i macNem1.NW_012011000v1 I 8 C 0 s cerAty1.NW_012002071v1 1454418 60 + 3144229 cacacacagcagcacatacacatgtgacaccacacacatgcacgcacagtgtgcacagtg i cerAty1.NW_012002071v1 I 8 C 0 s chlSab2.chr13 96739700 60 + 98384682 cacacacagcagctcgtacacatgtgacaccacacacatgcaagcacagtgtgcacagtg i chlSab2.chr13 I 8 C 0 s manLeu1.NW_012106474v1 8295474 60 - 10857215 cacacacagcagcacatacacatgtgacaccacacacatgcacgcacagtgtgcacagtg i manLeu1.NW_012106474v1 I 8 C 0 s colAng1.NW_012114488v1 15665794 58 - 23502949 cacacacagcagcacgtacacatgtgacac--cacacatgcacacacagtgtgcacagtg i colAng1.NW_012114488v1 I 444 C 0 s calJac3.chr4 169949051 43 + 171630274 caagcacagcaacacggacgcatgtgatgc--cacacacacatgc--------------- i calJac3.chr4 I 6 C 0 s saiBol1.JH378287 1348002 46 - 2905041 caagcacagtaacacgtactcatgtgatac--cacacacatatgcaca------------ i saiBol1.JH378287 I 6 C 0 s canFam3.chr1 56220698 20 + 122678785 ----------------------TGTAAGTC----------TGGGCATAATTT-------- i canFam3.chr1 C 0 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e aotNan1.NW_018494782v1 1559263 473 - 1813869 I e cebCap1.NW_016107695v1 1314054 105 - 2164891 I e dasNov3.JH569188 645458 0 + 760995 C a score=147456.000000 s hg38.chr6_KB021644v2_alt 160818 23 + 185823 cacacacatgcacacacac-ccca s panTro5.chr6 1781783 23 - 175400573 cacacacatgcacacacac-ccca i panTro5.chr6 C 0 C 0 s panPan2.chr6 171850880 23 + 173848474 cacacacatgcacacacac-ccca i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11533800 23 - 12463322 cacacacatgcacacacac-ccca i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156366189 23 + 157873769 cacacacgtgcacacacac-ccca i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170394458 23 + 172585720 cacacacatgcatacacac-cccc i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169137741 23 - 170955103 cacacacatgcatacacac-cccc i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8424095 23 + 10161646 cacacacatgcatacacac-cccc i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1454478 23 + 3144229 cacacacatgcatacacaa-cccc i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96739760 22 + 98384682 cacacacatgcatacaca--cccc i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8295534 22 - 10857215 cacacacatgcatacaca--cccc i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15665852 23 - 23502949 cacacagatgcacacacac-ccca i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169949094 10 + 171630274 -------------acacac-ccca i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1348048 23 - 2905041 cacacacacatgaacacac-cccc i saiBol1.JH378287 C 0 C 0 s aotNan1.NW_018494782v1 1559736 22 - 1813869 --cacacacatgcacacacaccca i aotNan1.NW_018494782v1 I 473 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e cebCap1.NW_016107695v1 1314054 105 - 2164891 I e dasNov3.JH569188 645458 0 + 760995 C e canFam3.chr1 56220718 0 + 122678785 C a score=407721.000000 s hg38.chr6_KB021644v2_alt 160841 52 + 185823 cacacactcacatcacaACTAAAAGACTGAAGCATCGTCGAGAGGAAACCTT------- s panTro5.chr6 1781806 52 - 175400573 cacacactcacatcacaACTAAAAGACTGAAGCATCGTCGAGAGGAAACCTT------- i panTro5.chr6 C 0 C 0 s panPan2.chr6 171850903 52 + 173848474 cacacactcacatcacaACTAAAAGACTGAAGCATCGTCGAGAGGAAACCTT------- i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11533823 47 - 12463322 cacacactcacaT-----CTAAAAGACTGAAGCATCGTCGAGAGGAAACCTT------- i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156366212 52 + 157873769 cacacactcacatcacaACTAAAAGACTGAGGCATTGTCGAAAGGAAACCTT------- i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170394481 52 + 172585720 cacacactcacatcacaACTAAAAGACGGAGGCATCGTCCGGAGGAAACCTT------- i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169137764 52 - 170955103 cacacactcacatcacaACTAAAAGACGGAGGCATCGTCCGGAGGAAACCTT------- i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8424118 52 + 10161646 cacacactcacatcacaACTAAAAGACGAAGGCATCGTCCGGAGGAAACCTT------- i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1454501 52 + 3144229 cacacactcacatcacaACTAAAAGACTGAGGCATCGTCCAGAGGAGACCTT------- i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96739782 52 + 98384682 cacacactcacatcacaACTAAAAGACTGAGGCATCGTCCAGAGGAAACCTT------- i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8295556 52 - 10857215 cacacactcacatcacaACTAAAAGACTGAGGCATCGTCCAGAGGAAACCTT------- i manLeu1.NW_012106474v1 C 0 I 6859 s colAng1.NW_012114488v1 15665875 52 - 23502949 cacacactcacatcacaACTAAAAGACTGAGGCATCATCCGGAGGAAAACTT------- i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169949104 49 + 171630274 cacacactcacaTCACAACTGAAA-AC--TGGTGTCATGGAGAGGAAACCTT------- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1348071 50 - 2905041 cacacacaTCAATCACAACTAAAAGAC--AGGCGTCATGGAGAGGAAGCCTT------- i saiBol1.JH378287 C 0 C 0 s aotNan1.NW_018494782v1 1559758 50 - 1813869 cacacactcacatcacaACTAAAAGAC--AGGTGTCATGGAGAGGAAGCCTT------- i aotNan1.NW_018494782v1 C 0 C 0 s canFam3.chr1 56220718 18 + 122678785 -----------------------------AAACATCATC-----AAAAATTT------- i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 645458 59 + 760995 cacacacacacaTCATGATTAAAAGACTGGGACATAATCTGAAGATAATCTAATTGCCT i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e cebCap1.NW_016107695v1 1314054 105 - 2164891 I a score=4906251.000000 s hg38.chr6_KB021644v2_alt 160893 642 + 185823 CCAAAGCCATTGTA-TCTGCAGTGATATTGCCtat----aaatctcagtccatgtatttagt-atgcaataactatcgctagccttattattgaaaatgctatttctttg-tatttctgagctcaaatttcactaagattggggtaaacctaactttaattattcttCAGAT-----------------GTA-------------TGCCTCAGTTTAGGAGACTTGCACGGGGCC-AATAGGTTATTtacctagtatttatataatgctcacccagtgtcaggca--ctgcttcaaatgcttggtaaatattaactcatttaatccttacaataaatt---------------------------------------------------------------cagag---------------------------ggatgcgtggttttac----------------------------------------------------------------------------------------aaatgaggaagcttaagaacagagacgtgaagtaacttgcctaaggcgacatagcattaggaag-----ggagttggcatctgaactcctt--gcctggctccaaacctcatcctctCGGTCAGA----CCTCC-------TGAGGCCACAACATCTCTCTGCTCGCTT--GGCCTTCTAGTTACAACACCCACCAGGCTGGGCCCCAGAACTATTTTGTGAAGG----TGTCTGTTGACCCGGTTTTCCTAAACACACCTTATATTCCTGTCTGATGCTTCTTTACTTCACGCCAAGAAGCAAAGGACTGTCTCCAACTGTCTCCAAATGCTTAGACCT-CCCCTCC- s panTro5.chr6 1781858 641 - 175400573 CCAAAGCCATTGTA-TCTGCAGTGATATTGCCtat----aaatctcagtccatgtatttagt-atgcaataactatcgctagccttattattgaaaatgctatttctttg-tatttctgagctcaaatttcactaagattggggtaaacctaactttaattattcttCAGAT-----------------GTA-------------TGCCTCAGTTTAGGAGACTTGCACGGGGCC-AATAGGTTATTtacctagtatttatataattcttacccagtgtcaggca--ctgcttcaaatgctttgtaaatattaactcatttaatccttacaataaatt---------------------------------------------------------------cagag---------------------------ggatgcgtggttttac----------------------------------------------------------------------------------------aaatgaggaagcttaagaacagagatgtgaagtaacttgcctaaggcgacatagcattaggaag-----ggagttggcatctgaactcctt--gcctggctccaaacctcatcctctCGGTCAGA----CCTCC-------TGAGGCCACAACATCTCTCTGCTCGCTT--GGCCTTCTAGTTACAACACCCACCAGGCTGGGCCCCAGAACTATTTTGTGAAGG----TGTCTGTTGACCCGGTTTTCCTAAACACACCTTATATTCCTGTCTGATGCTTCTTTACTTCACGCCAA-AAGCAAAGGACTGTCTCCAGCTGTCTCCAAATGCTTAGACCT-CCCCTCC- i panTro5.chr6 C 0 C 0 s panPan2.chr6 171850955 642 + 173848474 CCAAAGCCATTGTA-TCTGCAGTGATATTGCCtat----aaatctcagtccatgtatttagt-atgcaataactatcgctagccttattattgaaaatgctatttatttg-tatttctgagctcaaatttcactaagattggggtaaacctaactttaattattcttCAGAT-----------------GTA-------------TGCCTCAGTTTAGGAGACTTGCACGGGGCC-AATAGGTTATTtacctagtatttatataattcttacccagtgtcaggca--ctgcttcaaatgctttgtaaatattaactcatttaatccttacaataaatt---------------------------------------------------------------cagag---------------------------ggatgcgtggttttac----------------------------------------------------------------------------------------aaatgaggaagcttaagaacagagatgtgaagtaacttgcctaaggcgacatagcattaggaag-----ggagttggcatctgaactcctt--gcctggctccaaacctcatcctctCGGTCAGA----CCTCC-------TGAGGCCACAACATCTCTCTGCTCGCTT--GGCCTTCTAGTTACAACACCCACCAGGCTGGGCCCCAGAACTATTTTGTGAAGG----TGTCTGTTGACCCGGTTTTCCTAAACACACCTTATATTCCTGTCTGATGCTTCTTTACTTCACGCCAAGAAGCAAAGGACTGTCTCCAACTGTCTCCAAATGCTTAGACCT-CCCCTCC- i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11533870 641 - 12463322 CCAAAGCCATTGTA-TCTGCAGTGATATTGCCtat----aaatctcagtccatgtatttagt-atgcaataactatcactagccttattattgaaaatgctatttctttg-tatttctgagctcaaatttcactaagattggggtaaacctaactttaattattcttcggat-----------------GTA-------------TGCCTCAGTTTAGGAGACTTGCACGGGGCC-AATAGGTTATTtacctagtatttatataatgcttacccagtgtcaggca--ctgcttcaaatgctttgtaaatattaactcatttaatccttacaataaatt---------------------------------------------------------------cagag---------------------------ggatgcgtggttttac----------------------------------------------------------------------------------------aaatgaggaagcttaagaacagagatgtgaagtaactttcctaaggcgacatagcattaggaag-----ggagttggcatctgaactcctt--gcctggctccaaagctcatcctctcagtcaGA----CCTCC-------TGAGGCCACAACATCTCTCTGCTCGCTT--GGCCTTCTAGTTACAACACCCACTAGGCTGGGCCCCAGAACTATTTTGTGAAGG----TGTCTGTTGAGCCGGTTTTCGTAAACACACCTTATATTCCTGTCTGATGCTTCTTTACTTCACGCCAAGAAGCAAAGGACTGTCTCCAACTGTCTCCAAATGCTCAGACCT--CCCTCC- i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156366264 640 + 157873769 CCAAAGCCATCGTA-TCCGCAGTGATATTGCCtat----aaatctcagtccgtgtattcagt-atgaaataactatcgctagccttattattgaaaatgctatttctttg-tatttctgagctcaaatttcactaagattggggtaaacctaactttaattattcttgggat-----------------GTA-------------TGCCTCAGTTTAGGAGACTTGCACGGGGCC-AATAGGTTATTTACCTGGTatttatataatgcttacccagtgtcaggca--ctgcttcaaatgctttgtaaatattaactcatttaatcctcacaataaatt---------------------------------------------------------------cagag---------------------------ggatgcgtggttttat----------------------------------------------------------------------------------------aaatgaggaagcttaagaacagagatgtgaagcaacttgcccaaggcaacatagcattaggaag-----ggagttggcatctgaactcctt--gcctggctccaaaactcatcctctcagtcaGA----CCTCC-------TGAGGCCAC--CATCTCTCTGCTCGCTT--GGCCTTCTAGTTACAACACCCACCAGGCTGGGCCCCAGAACTATTTTGTGAAGG----TGCCTGTTGACCCGGTTTTCCTAAACACACCTTATATTCCTGTCTGATGCTTCTTTACTTCATGCCAGGAAGCAAAGGACTGTCTCCAACTGTCTCCAAATGCTTAGACCT-CCCCTCC- i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170394533 639 + 172585720 TCAAAGTCATTGCA-TCCTCAATGATATTGCCtat----aaatctcagtccatgcattctgt-atgcaataactatccctagccttattactgaaaatgctatttctttg-tatttctgagctgaaatttcactaagattggggtaaacctaactttaattattcttgggat-----------------GTA-------------AGCCTCAGTTTACGAGACTTGCACGGGGCC-AATAGGTTATGtacctagtatttatataatgcttaccaggtgttaggca--ctgcttcaaatgctttgtaaatattaactcatttaatctgcacaataaatt---------------------------------------------------------------cagag---------------------------ggatgtgtgattttat----------------------------------------------------------------------------------------aaatgaggaagcttaaggacagagatgtgaagtcacgtgcccaacgcgagacagcattaggaag-----acaagtggcctctgaacttctt--gcctggctccaaagctcatcctctcagtcaGA----CCTCC-------TGAGGTCAC--CATCTCTCTGCTCGCTT---ACCTTCTAGTTACAACACCCACCAGGCCGGGCCCCGGAACTATTTTGTGAAAG----TGCCTGTTGACCCGGTTTTCCTAAACACACCTTATATTCCTGTCTGATGCTTCTTTACTTCTTGCCAGGAAGCAAAAGACTGGCTCCAACTGTCTCCAAATGCTTAGACCT-CCCCTCC- i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169137816 639 - 170955103 TCAAAGTCATTGCA-TCCTCAATGATATTGCCTAT----AAATCTCAGTCCATGCATTCTGT-ATGCAATAACTATCCCTAGCCTTATTACTGAAAATGCTATTTCTTTG-TATTTCTGAGATGAAATTTCACTAAGATTGGGGTAAACCTAACTTTAATTATTCTTGGGAT-----------------GTA-------------AGCCTCAGTTTACGAGACTTGCACGGGGCC-AATAGGTTATGtacctagtatttatataatgcttaccaggtgttaggca--ctgcttcaaatgctttgtaaatattaactcatttaatctgcacaataaatt---------------------------------------------------------------cagag---------------------------ggatgtgtgattttat----------------------------------------------------------------------------------------aaatgaggaagcttaaggacagagatgtgaagtcacgtgcccaacgcgagacagcattaggaag-----acaagtggcctctgaacttctt--gcctggctccaaagctcatcctctcagtcaGA----CCTCC-------TGAGGTCCC--CACCTCTCTGCTCGCTT---ACCTTCTAGTTACAACACCCACCAGGCCGGGCCCCAGAACTATTTTGTGAAAG----TGCCTGTTGACCCGGTTTTCCTAAACACACCTTATATTCCTGTCTGATGCTTCTTTACTTCATGCCAGGAAGCAAAAGACTGGCTCCAATTGTCTCCAAATGCTTAGACCT-CCCCTCC- i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8424170 639 + 10161646 TCAAAGTCATTGCA-TCCTCAATGATATTGCCtat----aaatctcagtccatgcattctgt-atgcaataactatccctagccttattactgaaaatgctatttctttg-tatttctgagctgaaatttcactaagattggggtaaacctaactttaattattcttgggat-----------------GTA-------------AGCCTCAGTTTACGAGACTTGCACGGGGCC-AATAGGTTATGtacctagtatttatataatgcttaccaggtgtcaggca--ctgcttcaaatgctttgtaaatattaactcatttaatctgcacaataaatt---------------------------------------------------------------cagag---------------------------ggatgtgtgattttat----------------------------------------------------------------------------------------aaatgaggaagcttaaggacagaggtgtgaagtcacgtgcccaacgcgagacagcattaggaag-----acaagtggtctctgaacttctt--gcctggctccgaagctcatcctctcagtcaGA----CCTCC-------TGAGGTCAC--CACCTCTCTGCTTGCTT---ACCTTCTAGTTACAACACCCACCAGGCCGGGCCCCAGAACTATTTTGTGAAAG----TGCCTGTTGACCCGGTTTTCCTAAACACACCTTATATTCCTGTCTGATGCTTCTTTACTTCATGCCAGGAAGCAAAAGACTGGCTCCAACTGTCTCCAAATGCTTAGACCT-CCCCTCC- i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1454553 638 + 3144229 TCAAAGTCATTGCA-TCCGCAATGATATTGCCtat----aaatctcagtccatgcattctgt-atgcaataactatcgctagccttattactgaaaatgctatttctttg-tatttctgagctgaaatttcactaagattggggtaaacctaactttaattattcttgggat-----------------GTA-------------AGCCTCAGTTTA-GAGACTTGCACGGGGCC-AATAGGTTATGtacctagtatttatataatgtttaccaggtgtcaggca--ctgcttcaaatgctttgtaaatattaactcatttaatctgcacaataaatt---------------------------------------------------------------cagag---------------------------ggatgtgtgattttat----------------------------------------------------------------------------------------aaatgaggaagcttaaggacagagatgtgaagtcacgtgcccaacgcgagacagcattaggaag-----acaagtggcctctgaacttctt--gcctggctccaaagctcatcctctcagtcaGA----CCTCC-------TGAGGTCAC--CATCTCTCTGCTCGCTT---ACCTTCTAGTTACAACACCCACCAGGCCGGGCCCCAGAACTATTTTGTGAAAG----TGTTTGTTGACCCGGTTGTCCTAAACACACCTTATATTCCTGTCTGATGCTTCTTTACTTCATGCCAGGAAGCAAAGGACTGGCTCCAACTGTCTCCAAATGCTTAGGCCT-CCCCTCC- i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96739834 639 + 98384682 TCAAAGTCATTGCA-TCCGCAATGATATTGCCtat----aaatctcagtccatgcattctgt-gtgcaataactatcgctagccttattactgaaaatgctatttctttg-tatttctgagctgaaatttcactaagattggggtaaacctaactttaattattcttgggat-----------------GTA-------------TGCCTCAGTTTAGGAGACTTGTACGGGGCC-AATAGGTTATGtacctagtatttatataatgcttaccaggtgtcaggca--ctacttcaaatgctttgtaaatattaactcatttaatctgcacaataaatt---------------------------------------------------------------cagag---------------------------ggatgtgtgattttat----------------------------------------------------------------------------------------aaatgaggaagcttaaggacagagatgtgaagtaacgtgcccaaggcgagacagcattaggaag-----acaagtgtcatctgaacttctt--gcctggctccaaagctcatcctctcagtcaGA----CCTCC-------TGAGGCCAC--CATCTCTCTGCTCGCTT---ACCTTCTAGTTACAACACCCACCAGGCCGGGCCCCAGAACTATTTTGTGAAAG----TGCCTGGTGACCCGGTTTTCCTAAACACACCTTATATTCCTGTCTGATGCTTCTTTATTTCATGCCTGGAAGCAAAGAACTGGCTCCAACGGTCTCCAAATGCTTAGACTT-CCCCTCT- i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15665927 640 - 23502949 TCAAAGCCACTGCA-CCGGCAATGATATTGACTAT----AAATCTCAGTCCATGCATACTGT-ATGCAATAACTATCGCTAGCCTTATTACTGAAAATGCTATTTCTTTG-TATTTCTGAGCTGAAATTTCACTAAGATTGGGGTAAACCTAACTTTAATTATTCTTGAGAT-----------------GTA-------------TGCCTCAGTTTAGGAGACTTGCACGGGGCC-AATAGGTTATGtacctagtatttatataatgcttaccaggtgtcaggca--ctgcttcaaatgctttgtaaatattaactcatttaatctacacaataaatt---------------------------------------------------------------cagag---------------------------ggatgtgtgattttat----------------------------------------------------------------------------------------aaatgaggaagcttaaggacagagatgtgaagtaacttgcccaaggcgagacagcattaggaag-----acaagtggcatctgaacttctt--gcctggctccaaagctcatcctctcagtcaGA----CCTCC-------TGAGGCCAC--CATCTCTCTGCTCGCTT--GGCCTTCTAGTTACAACACCCACCAGGCTGGGCCCCAGAACTACTTTGTGAAAG----TGGCTGTCGACCCAATTTTCCTAAACACACCTGATATTCCTGTCTGATGCTTCTTTACTTCATGCCAGGAAGCAAAGAACTGTCTCCAACTGTCTCCAAATGCTTAGACCT-CCCCTCC- i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169949153 642 + 171630274 TCAAAGCCGTCATA-TCCACAATGACACTGCCTGT----AGGTCTCAGCCCATGTATTCAGT-ATGCAATAAATCTTGCGACCCTTATTATTGAAAATGCTATTTCTTTG-TGTTTCTGAGCTCAAATTTCACTAAGATTGGGATAAACCTAACATTAATTATTCTTGGTAT------------------TA-------------TGCCTCAGTTTAGGAGTTTTGCATGGGGCC-AATAGGTTATTtacctagcatttataaaatgcttaccaggtgtcaggca--ctgtttcaaatgctttgtaaatattagctcatttaatcctcacattaaatt---------------------------------------------------------------cagag---------------------------ggatgtgtgattttat----------------------------------------------------------------------------------------aaatgagggagcttaggaacagagacgtgaagcaacttgcccaaggccacacagcactaggaag-----ggaggtggtgtctgaacttctc--acctggctccaaagctcgtcctctCTGTAAGACCCCCCCCC-------TGAGGCCAC--CATCTCTCTGCTTGCTT--AGCCTTCAAGTTACAACAGCCACCAGGCTGGGCCCCAGAACTATTTTGTGAAGG----TGCCTGTTGACCCAATTTGCCTAAACACCATTCGTATTCCTGCCTGAAGCTTCTTTACTTAATGCCAGGAAGCAACGGACAGGTTCAGACTGCCTCCAAACGCCTAGACCTCCCCCT--- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1348121 624 - 2905041 TCAAAGCCCTCGTA-TCCACAATGATGTTGCCtgt----aaatctcagtccatgtactcagt-atgcaataaatcatgctacccttcttattgaaaatactatttctttg-tgtttctgagctcaaatttcactaagattggggtaaacctaacattaattattcttggtat------------------tA-------------TGACTCAGTTTAGGAGTCTTGCATGGGGCCAAACAGGTTatttatctagcattt--------------aggtgtcagaca--ctgtttcaaatgctttgtaaatgttagctcatttaatcctcacattaaatt---------------------------------------------------------------cagag---------------------------ggatgtgtgattttat----------------------------------------------------------------------------------------aaattagggagcttacaaacagagatgtgaagtaacttgtccaagaccacacagcactaggaag-----ggaggtggtgtctgaacttctt--gcctggctccaaagctcatcctttCCGTGAGA----CCCCC-------TGAGGCCAC--CATCTCTGTGCTTGCTT--AGCCTTCTAGTTACAGCACCCACCAGGCTGGGCCACAGAACTATTTTGTGAAGG----CGCCTGTTGACCCAATTTGCCTAAACACCATTTGTGTTCCTGCCTGAGGCTTCTTTCCTTCATGCCAGGAAGCAAAGAATGGGTTCTGACCGCCTCCACATGCCTAGACCT-CCCCT--- i saiBol1.JH378287 C 0 C 0 s aotNan1.NW_018494782v1 1559808 636 - 1813869 TCAAAGCCGTCATA-TCCATAATGATATCGCCtgt----aaatctcagtccatgtattcagt-atgcaataaatcttgctacccttattattgaaaatgctatttctttg-tgtttctgagctcaaatttcactaggattggggtaaacctaacattaattattcttggtat------------------ta-------------tgcctcAGTTTAGGAGTCTTGCATGGGGCC-AACAGGttatttatctagcatttatagaatgcttacgaggtgtcaggca--ctgtttcaaatgctttgtaaatattagttcatttaatcctcacattaaatt---------------------------------------------------------------cagag---------------------------ggatgtgcgattttat----------------------------------------------------------------------------------------aaatgagggagcttaggaacagagatgtgaagtaacttgcccaaggccacacagcactaggaag-----ggaggtggtgtctgaacttctc--acctggctccaaagctcatcct-tctGTGAGG----CCCCC-------TGAGGCCCC--CATCTCTCTGCTTGCTT--AGGCTTCTATTTACAGCACCCACGAGGTTGGGCCCCAGAACTATTTTGTGAAGG----TGCCTGTTGACCCAATTTGCCTGAACACCATTCATATTCCTGCCTGAGGCTTCTTTACCTCATGCCAGGAAGCAAAGAATGGGTTCTGACTGCCTCCAAATG-CTAGACCTCCCCCT--- i aotNan1.NW_018494782v1 C 0 C 0 s canFam3.chr1 56220736 807 + 122678785 TGAAAGACTTTCTA-TGTGCAGGGGTATTGCgtgt----aaatctcagcctatgtgttgagcgatgcaagaaatatcatt-gccttattatctaaaatgccacttc------atgtctaatctccattctaa--aaaactgg--caaatcaaac--caattattcttgaaat-----------------ccacattcccaggcattgcctca-tttaggagtcttgcacggtgcc-aTTAGGTTATCtaacaaatatttatacaaccctt--tatgtatttggcatgccattccaggtgctttgtcaatattaactca-ttaatcctcatggcaaatttattttttattttttaaagatttatttattcatgagagagagagagagaggcagagacacaggcagagggagaagcaggatccccacagggagccggatgtgggactcgatcccggatactcagatcacaccctgagccgaaggcagacgcttaaccgctgaaccacccaggtgtccccctcatgggaaatttagtgagaaacgaggatgcttgggaacagggtcgttcc-tgacatgcctgaggccacagagc---tggaagttggtggcagtggagtctgaactc-----agctgg-tgcagcgct-gtcctcccaagcaGA----CCTCTCCCGAGATGAGATCAC--CCTCT---------------GCCTGCCGGTTACGCCA--CAGCGGGCTGGGACCTGGAATTCTCTGGGGAAAGTGGCTGGCTGTCGTCCCCGTTTTCCCA---ACACCTCATATTCCTGCTTCGCATTCCTTCATTTCATGCCAGGAAGCAAAAGGCTGCTTCTGCCCACCTTCAGAGTCCTAGACCT-CCCCTCA- i canFam3.chr1 C 0 I 1 s dasNov3.JH569188 645517 629 + 760995 GAAAAGTCTTTTTATTTTACAATTATATTATgcatataaaaatctcagtccacatatcagat-aggtaagaaatatcactgtccttat---ccaaaatgctactttattactcacttcgatcccatactctatgaaggctgtggtaaatcttgcatcaactgctcctgggttccacataaccctggggcata-------------tgccacaggtcaagggtcttgctcactgct-aaTCGACTATattacaaatatttatataacccttacttagtgtcaggca--ctgttctaagtattttgtatatattaacaca-----------------------------------------------------------------------------------tatag---------------------------agacatattaattcat----------------------------------------------------------------------------------------aagtgaagaagctgaggaacagagtttttaagtaactcgcctaaagccacattcctgtaaagag---atgaaggtggaatcggaactccaccaggctggctccaaagcccctactcttaaccaGA--TTTCTCC-------TGAAATGAC--CATTGCCTTTATGGGTTTAGTCTCTCCAGGTATGGCAACCA------------CCAGAAATATTTTGAGAGGG----TGCCTATGATCTCA--TTTTCTAAACACATCTAATATAGCTGTCTGGTGTTTC---ATTTCATGCCAGGAAGCAAAGGTCTGAT---AATGTCTTTCAAATACTCAGACCT-CTGCCCAC i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e cebCap1.NW_016107695v1 1314054 105 - 2164891 I e manLeu1.NW_012106474v1 8295608 6859 - 10857215 I a score=376273.000000 s hg38.chr6_KB021644v2_alt 161535 49 + 185823 GCACACGGAGGAGGGGTCTCCGTCTGTCATGGTGCTGGCATGCACCGGG- s panTro5.chr6 1782499 49 - 175400573 GCACACGGAGGAGGGGTCTCCGTCTGTCATGGCGCTGGCATGCACCGGG- i panTro5.chr6 C 0 C 0 s panPan2.chr6 171851597 49 + 173848474 GCACACGGAGGAGGGGTCTCCGTCTGTCATGGCGCTGGCATGCACCGGG- i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11534511 49 - 12463322 GCACACGGAGGAGGGGTCTCCGTCTGTCATGGTGCTGGCATGCACCGGG- i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156366904 49 + 157873769 ACACACAGAGGAGGGGTCTCCATCTGTCACGGTGCTGGCATGCACCGGG- i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170395172 49 + 172585720 GCACACAGAGGAGAGGTCTCAGTCTGTCATGGTGCTGGCATGCCCTGGG- i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169138455 49 - 170955103 GCACACAGAGGAGAGGTCTCAGTCTGTCATGGTGCTGGCATGCCCTGGG- i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8424809 49 + 10161646 GCACACAGAGGAGAGGTCTCAGTCTGTCATGGTGCTGGCATGCCCTGGG- i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1455191 49 + 3144229 GCACACAGAGGAGAGGTCTCGGTCTGTCATGGTGCTGGCATGCCCTGGG- i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96740473 49 + 98384682 GCACACAGAGGAGAGGTCTCGGTCTGTCATGGTGCTGGCATGCACTGGG- i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8302467 49 - 10857215 GCACACAGAGGAGAGGTCTCGGTCTGTCATGGTGCTGGCACGCCCTGGG- i manLeu1.NW_012106474v1 I 6859 C 0 s colAng1.NW_012114488v1 15666567 49 - 23502949 GCACACAGAGGAGAGGTCTCGGTCTGTCGTGGTGCTGGCATGCACTGGG- i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169949795 49 + 171630274 GCACATGGAGGAGGAGTGTCTGTGTGTCATGGTGCTGGTGTGCACCGAG- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1348745 49 - 2905041 GTGCATGGAGGAGGGGTGTCCGTGTGTCGTGGTGCTGGTGTGCACTGCG- i saiBol1.JH378287 C 0 C 0 s aotNan1.NW_018494782v1 1560444 49 - 1813869 GCACGTGGAGGAGGAGTGTCTGTGTGTCACGGTGCTGGTGTGCACCACG- i aotNan1.NW_018494782v1 C 0 C 0 s canFam3.chr1 56221544 27 + 122678785 TCCCACAGGGGAG-------CACCTG---------------GACCCGGG- i canFam3.chr1 I 1 C 0 s dasNov3.JH569188 646146 50 + 760995 CCACCTAGGGTAATCACCTCTCTTTAATATGGGGATGGTATTGTAAAGGC i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e cebCap1.NW_016107695v1 1314054 105 - 2164891 I a score=10887772.000000 s hg38.chr6_KB021644v2_alt 161584 1092 + 185823 GTCCTTTTTCTATCCCAG-CCACTTCCAAGAT-GCCCTTTCCAAGACTTACCTGGTTTACaaacaccgttcttttttgtctg---------aaaact---------tccaagttctcctgaaagcctaggctttggg-aagaccaattcttgatatgca----------------gctacttctgTGTGAAGAGTGAGAAGAGAAGGAGGCGGTGGCAGGGAGAGGAAA-ACCCCGTGTGTGTGCACATTCCAAAACACCCACAGCCACAAACGGCAGATCCGATGTTTTATGGTACCTTTTTACTAAATGGTTGTGTTTCTTTCCTTCGTTCTACTGGCCCAAGTCCTAGGTGCTTACCACCATCAGCTGATGAGGAGG-------GCTCATTGGATGCTGCCGAGATTTGAAACA--AGAGTCTTCCAAACCAAGGTTTCAACTGTGAAGTCGTTTCTTGCTTAAAGGGCCAGTGGAATCTCCTTAAAAAGGAATGGAACATCTTAGC------AC---------TCTGTATCTTTTGGCTGAGACGTATGCTTCAAAATAAGTGTTTTCCTGTAAACGGGTCCTTACTAAGTGTTGGGGTGAGTGAATATGTGCTCTTGAAATGTGTTATGGTGGAACGAAAGCTTCAGTCACCTGCAGACATTTCCCCGGCGGAGATA-AGC-TTCTTCCAGTCTGGGCCTGGAG-TTTCCCTTACTCCATCGGAAAGGAACCCAGA---CTGGTGATAATGACAAGTTGGCAGTGTGGCTTTCATGCACCAGGG-CC-AGTGATGGAAATACTCTCTTACCCGAGGCTCGCAGAATGCTATAAAC-TTGGGGATG----GAGGGGCCACAATGCTG-G-AGGGAAAAGCATAAAGCAGCCCGGAGACAAGAAACAGACTCGC-CAATCAAATGCTGTGCCTTTTCCCTC-GGTCCC-AGGATGGCTGCCCTCATGATTCTGGTGTAGTCCCTGTCATCCAGCGCCACTGTGCC---GG---------GCTGGCAATGCCAGTGCTCCATATTAGAC-------------AGAAGGACAAAGAAAGCTTTTAATTTAGTATCAGAGTAATGAAAACGCCTTCTTCCGCGGATACTGTAACACTGGCAGGGTTTTAAGTAAATG-GAATCAGATATTTAAAAAGGATTTGCCGAAAGGAA---------------------------------------------TT---AGG------- s panTro5.chr6 1782548 1092 - 175400573 GTCCTTTTTCTGTCCCAG-CCACTTCCAAGAT-GCCCTTTCCAAGACTTACCTGGTTTACaaacaccgttcttttttgtctg---------aaaact---------tccaagttctcctgaaagcctaggctttggg-aagaccaattcttgatatgca----------------gctacttctgTGTGAAGAGGGAGAAGAGAAGGAGGCGGCGGCAGGGAGAGGAAA-ACCCCGTGTGTGTGCACATTCCAAAACACCCACAGCCGCAAACGGCAGATCCGATGTTTTATGGTACCTTCTTACTAAATGGTTGTGTTTCTTTCCTTCGTTCTACTGGCCCAAGTCCTAGGTGCTTACCACCATCAGCTGATGAGGAGG-------GCTCATTGGATGCTGCCGAGATTTGAAACA--AGAGTCTTCCAAACCAAGGTTTCGACTGTGAAGTCATTTCTTGCTTAAAGGGCCAGTGGAATCTCCTTAAAAAGGAATGGAACATCTTGGC------AC---------TCTGTATCTTTTGGCTGAGACGTATGCTTCAAAATAAATGTTTTCCTGTAAACGGGTCCTTACTAAGTGTTGGGGTGAGTGAATATGTGCTCTTGAAATGTGTTAT-GTGGAACGAAAGCTTCAGTCACCTGCAGACATTTCCCAGGTGGAGATA-AGC-TTCTTCCAGTCGGGGCCTGGAGTTTTCCCTTACTCCATCGGAAAGGAACCCAGA---CTGGTGATAATGACAAGTTGGCAGTGTGGCTTTCATGCACCAGGG-CC-AGTGATGGAAATACTCTGTTACCCAAGGCTCGCAGAATGCTATAAAC-TTGGGGATG----GAGGGGCCACAATGCTG-G-AGGGAAAAGCATAAAGCAGCCCGGAGACAAGAAACAGACTCGC-CAATCAAATGCTGTGCCTTTTCCCCC-GGTCCC-AGGATGGCTGCCCTCATGATTCTGGTGTAGTCCCTGTCATCCAGCGCCACTGTGCC---GG---------GCTGGCAATGCCGATGCTCCACATTAGAC-------------AGAAGGACAAAGAAAGCTTTTAATTTAGTATCAGAGTAATGAAAACGCCCTCTTCCGCGGATACTGTAACACTGGCAGGGTTTTAAGTAAATG-GAATCAGATATTTAAAAAGGATTTGCCGAAAGGAA---------------------------------------------TT---AGG------- i panTro5.chr6 C 0 C 0 s panPan2.chr6 171851646 1093 + 173848474 GTCCTTTTTCTGTCCCAG-CCACTTCCAAGAT-GCCCTTTCCAAGACTTACCTGGTTTACaaacaccgttcttttttgtctg---------aaaact---------tccaagttctcctgaaagcctaggctttggg-aagaccaattcttgatatgca----------------gctacttctgTGTGAAGAGGGAGAAGAGAAGGAGGCGGCGGCAGGGAGAGGAAA-ACCCCGTGTGTGTGCACATTCCAAAACACCCACAGCCGCAAACGGCAGATCCGATGTTTTATGGTACCTTCTTACTAAATGGTTGTGTTTCTTTCCTTCGTTCTACTGGCCCAAGTCCTAGGTGCTTACCACCATCAGCTGATGAGGAGG-------GCTCATTGGATGCTGCCGAGATTTGAAACA--AGAGTCTTCCAAACCAAGGTTTCGACTGTGAAGTCGTTTCTTGCTTAAAGGGCCAGTGGAATCTCCTTAAAAAGGAATGGAACATCTTGGC------AC---------TCTGTATCTTTTGGCTGAGACGTATGCTTCAAAATAAATGTTTTCCTGTAAACGGGTCCTTACTAAGTGTTGGGGTGAGTGAATATGTGCTCTTGAAATGTGTTATGGTGGAATGAAAGCTTCAGTCACCTGCAGACATTTCCCCGGTGGAGATA-AGC-TTCTTCCAGTCGGGGCCTGGAGTTTTCCCTTACTCCATCGGAAAGGAACCCAGA---CTGGTGATAATGACAAGTTGGCAGTGTGGCTTTCATGCACCAGGG-CC-AGTGATGGAAATACTCTATTACCCAAGGCTCGCAGAATGCTATAAAC-TTGGGGATG----GAGGGGCCACAATGCTG-G-AGGGAAAAGCATAAAGCAGCCCGGAGACGAGAAACAGACTCGC-CAATCAAATGCTGTGCCTTTTCCCCC-GGTCCC-AGGATGGCTGCCCTCATGATTCTGGTGTAGTCCCTGTCATCCAGCGCCACTGTGCC---GG---------GCTGGCAATGCCGATGCTCCACATTAGAC-------------AGAAGGACAAAGAAAGCTTTTAATTTAGTAACAGAGTAATGAAAACGCCTTCTTCCGCGGATACTGTAACACTGGCAGGGTTTTAAGTAAATG-GAGTCAGATATTTAAAAAGGATTTGCTGAAAGGAA---------------------------------------------TT---AGG------- i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11534560 1086 - 12463322 GTCCTTTTTCTATCCCAC-CCACTTCCAAGAT-GCCCTTTCCAAGACTTACCTGGTTTACAAACACCGttc-tttttgtctg---------aaaact---------tccaagttctcctgaaagcctaggctttggg-aagaccaattcttgataagca----------------gctacttctgTGTGAagagggagaagagaaggagacggcggcagggagaggAAA-ACCCCGTGTGTGTGCACATTCCAAAACACCCACAGCCGCAAACGGCAGATCCGATGTTTTATGGTACCTTTTTACTAAATGGTTGTGCTTCTTTCCTTCGTTCTACTGGCCCAAGTCCTAGGTGCTTACCAC---CAGCTGATGAGGAGG-------GCTCATTGGATGCTGCCGAGATTTGAAACA----AGTCTTCCAAACCAAGGTTTCGACTGTGAAGTCATTTCTTGCTTAAAGGGCCAGTGGAATCTCCTTAAAAAGGAATGGAACATCTTAGC------AC---------TCTGTATCTTTTGGCTGAGACGTATGCTTCAAAATAAATGTTTTCCTGTAAACGGGTCCTTACTAAGTGTTGGGGTGAGTGAATATGTGCTCTTGAAATGTGTTATGGTGGAACGAAAGCTTCAGTCACCTGCAGACATTTCCCCGGCGGAGATA-AGC-TTCTTCCAGTCCGGGCCTGGAG-TTTCCCTTACTCCATCGGAAAGGAACCCAGA---CTGGTGATAATGACAAGTTGGCAGTGTGGCTTTCATGCACCAGGG-CC-AGTGATGGAAATACTCTATTACCCAAGGCTCGCAGAATGCTATAAAC-TTGGGGATG----GAGGGGCCACAATGCTG-G-AGGGAAAAGCATAAAGCAGCCCGGAGACAAGAAACAGACTCGC-CAATCAAATGCTGTGCCTTTTCCCTC-GGTCCC-AGGATGGCTGCCCTCATGATTCTGGTGTAGCCCCTGTCATCCAGCGCCACTGTGCC---GG---------GCTGGCAATGCCGGTGCTCCATATTAGAC-------------AGAAGGACAAAGAAAGCTTTTAATTTAGTATCAGAGTAATGAAAACGCCTTCTTCCGTGGATACTGTAACACTGGCAGGGTTTTAAGTAAATG-GAATCAGATATTTAAAAAGGATTTGCCGAAAGGAA---------------------------------------------TT---AGG------- i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156366953 1088 + 157873769 CTCCTTTTTCTATCCCAC-CCACTTCCAAGAT-GCCCTTTCCAAGACTTACCTGGTTTACGAACACCGttctgttttgtctg---------aaaact---------tccaagttctcctgaaggcctaggctttggg-aagaccaattcttgatatgca----------------gctacttctgTGTGAAGAGGGAGAAGAGAAGGAGGAGGCAGCAGGGAGAGGAAA-ACCCTGTGTGTGTGCACATTCCAAAACACCCACAGCCGCACACGGCAGATCCGATGTTTTATGGTACCTTTTTACTAAATGGTTGTGTTTCTTTCCTTCGCCCTACTGGCCCAAGTCCTAGGTGCTTACCAC---CAGCTGATGAGGAGG-------GCTCATACGATGCCGCCGAGATTTGAAACA--AGAGTCTTCCAAACCAAGGTTTCGACTGTGAAGTCATTTCTTGCTTAAAGGCACAGTGGAATCTCCTTAAAAAGGAATGGAACATCTTAGC------AC---------TCTGTATCTTTTGGCTGAGACGTATGCTTCAAAATAAATGTTTTCCTGTAAACGGGTCCTTACTAAGTGTTGGGGTGAGTGAATATGTGCTCTTGAAATGTGTTATGGTGGAACGAAAGCTTCAGTCACCTGCAGACATTTCCCCAGCGGAGATA-AGC-TTCTTCCAGTCCAGGCCTGGGG-TTCCCCTTACTCCATCGGAAAGGAAACCAGA---CTGGTGATAATGACAAGTTGGCAGTGTGGCTTTCATGCACCAGGG-CC-AGTGATGCAAATACTCTATTACCCAAGGCTCGCAGAATGCTATAAAC-TTGGGGATG----GAGGGGCCACAATGCTG-G-AGGGAAAAGCATAAAGCTGCCCGGAGACAAGAAACAGACTCGC-CAGTCAAACGCTGTGCCTCTTCCCCT--GTCCC-AAGATGGCTGTCCTCATGATTCTGGTGGAGTCCCTGTCATCCAGCGCCACTGTGCT---GG---------GCTGGCAACGCTGGTGCTCTCCATTCGCT-------------AGAAGGACAAAGAAAGATTTTAATTTAGTATCAGAATGATGAAAACGCCTTCTTCCATGGAAACTGTAACACTGGCAGGGTTTTAAGTTAATG-GAATCAGATATGTAAAAAGGATTTGCCGAAAGGAA---------------------------------------------TT---AGG------- i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170395221 1087 + 172585720 GTCCTTTTCCTATCCCAC-CCGCTTCCAAGAT-GCCATTTCCAAGACTTACCTGGTTTACaaacactgttcttttttgtctg---------aaaact---------tccaagttctcctgaaggcctaggctttgggaaagaccaattcttgatatgca----------------gctacttctgTGTGAAGAGGGAGAAGAGAAGGAGGAAGCGGCAGGGAGAGGAAA-ACCCC--GTGTGTGCACATTCCAAAGCACCCACAGCCACAAACAGCAGATCTGATGTTTTATGATACCTTTTCACTAAATTATTGTGTTTCTTTCCTTCGTTCTACTGGCCCAAGTCCTAGGTGCTTACCAC---CAGCTGATGAGGTGG-------GCTTATTGGATGCCGCCGAGATTTGAAACA--AGAGTCTTCCAAACCAAAGTTTCGACTGTGAAGTCATTTCTTGCTTAAAAGGCCAGTGGAATCTCCTTAAAAAGGAATGGAACATCTTAGC------AC---------TCTGTATCTTTTGGCAGAGACGCAGGCTTCAAAATAAACGTTTTCCTGTAAACGGGTCCTTACTAAGTGTTAGGGTGAGTGAGTATGTGCTCTTGAAATGTGCTCTGGTGAAACGAAAGCTTCAGTCACCTGCAGACATTTCACCGATGGAGATA-AGC-TTCTTCCAGTCCAGGCCTGGAG-TTTCCCTTACTCTATTGGAAAGGAACCCGGA---CTGGTGATAATGACAAGCCGGCAGTGTGGCTTTCATGCACCAGGG-CC-AGTGATGGAAATACCCTATTACCCAAGGCTCGCAGAATGCTATAAAC-TTGGGGACG----GAGGGGCCACAATGCCG-G--GGGAAAAGCACAAAGCAGCCTGGAGACAAGAAACAGACTCAC-CAATCAAACGCTGTGCCTTTTCCCCC-GGTCCC-AGGATGGCTGCCCTCATGATTCTGGTGGAATCCCTGTCCTCCAGCGCCACTGCGCT---GG---------GCTGGCAACACCGGCGCTCTCCATTAGCT-------------AGAAGGACAAAGAAAGATTTTAATTTAGTGTCAGAGTAAAGAAAATGCCTTCTTCCATGGAAACTGTAACACTGGCAGGGTTTTAAGTTAATG-GAATCAGATATTTAAAAAGGATCTGCAGAAAGGAA---------------------------------------------TT---AGG------- i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169138504 1087 - 170955103 GTCCTTTTCCTATCCCAC-CCGCTTCCAAGAT-GCCATTTCCAAGACTTACCTGGTTTACAAACACCGTTCTTTTTTGtctg---------aaaact---------tccaagttctcctgaaggcctaggctttgggaaagaccaattcttgatatgca----------------gctacttctgTGTGAAGAGGGAGAAGAGAAGGAGGAAGCGGCAGGGAGAGGAAA-ACCCC--GTGTGTGCACATTCCAAAGCACCCACAGCCACAAACAGCAGATCTGATGTTTTATGATACCTTTTTACTAAATTATTGTGTTTCTTTCCTTCGTTCTACTGGCCCAAGTCCTAGGTGCTTACCAC---CAGCTGATGAGGTGG-------GCTTATTGGATGCCGCCGAGATTTGAAACA--AGAGTCTTCCAAACCAAAGTTTCGACTGTGAAGTCATTTCTTGCTTAAAAGGCCAGTGGAATCTCCTTAAAAAGGAATGGAACATCTTAGC------AC---------TCTGTATCTTTTGGCAGAGACGCAGGCTTCAAAATAAATGTTTTCCTGTAAACGGGTCCTTACTAAGTGTTAGGGTGAGTGAGTATGTGCTCTTGAAATGTGCTATGGTGAAACGAAAGCTTCAGTCACCTGCAGACATTTCACCGATGGAGATA-AGC-TTCTTCCAGTCCAGGCCTGGAG-TTTCCCTTACTCCATTGGAAAGGAACCCGGA---CTGGTGATAATGACAAGCCGGCAGTGTGGCTTTCATGCACCAGGG-CC-AGTGATGGAAATACCCTATTACCCAAGGCTCGCAGAATGCTATAAAC-TTGGGGACG----GAGGGGCCACAATGCCG-G--GGGAAAAGCACAAAGCAGCCTGGAGACAAGAAACAGACTCAC-CAATCAAACGCTGTGCCTTTTCCCCC-GGTCCC-AGGATGGCTGCCCTCATGATTCTGGTGGAATCCGTGTCCTCCAGTGCCACTGTGCT---GG---------GCTGGCAACACCGGCGCTCTCCATTAGCT-------------AGAAGGACAAAGAAAGATTTTAATTTAGTGTCAGAGTAAAGAAAATGCCTTCTTCCATGGAAACTGTAACACTGGCAGGGTTTTAAGTTAATG-GAATCAGATATTTAAAAAGGATCTGCAGAAAGGAA---------------------------------------------TT---AGG------- i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8424858 1087 + 10161646 GTCCTTTTCCTATCCCAC-CCGCTTCCAAGAT-GCCATTTCCAAGACTTACCTGGTTTACaaacaccgttcttttttgtctg---------aaaact---------tccaagttctcctgaaggcctaggctttgggaaagaccaattcttgatatgca----------------gctacttctgTGTGAAGAGGGAGAAGAGAAGGAGGAAGCGGCAGGGAGAGGAAA-ACCCC--GTGTGTGCACATTCCAAAGCACCCACAGCCACAAACAGCAGATCTGATGTTTTATGATACCTTTTTACTAAATTATTGTGTTTCTTTCCTTCGTTCTACTGGCCCGAGTCCTAGGTGCTTACCAC---CAGCTGATGAGGTGG-------GCTTATTGGATGCCGCCGAGATTTGAAACA--AGAGTCTTCCAAACCAAAGTTTCGACTGTGAAGTCATTTCTTGCTTAAAAGGCCAGTGGAATCTCCTTAAAAAGGAATGGAACATCTTAGC------AC---------TCTGTATCTTTTGGCAGAGACGCAGGCTTCAAAATAAATGTTTTCCTGTAAACGGGTCCTTACTAAGAGTTAGGGTGAGTGAGTATGTGCTCTTGAAATGTGCTATGGTGAAACGAAAGCTTCAGTcacctgcagacatttcaccgatggagata-agc-ttcttccaGTCCAGGCCTGGAG-TTTCCCTTACTCCATTGGAAAGGAACCCGGA---CTGGTGATAATGACAAGCCGGCAGTGTGGCTTTCATGCACCAGGG-CC-AGTGATGGAAATACCCTATTACCCAAGGCTCGCAGAATGCTATAAAC-TTGGGGACG----GAGGGGCCACAATGCCG-G--GGGAAAAGCACAAGGCAGCCTGGAGACAAGAAACAGATTCAC-CAATCAAACGCTGTGCCTTTTCCCCC-GGTCCC-AGGATGGCTGCCCTCATGATTCTGGTGGAATCCCTGTCCTCCAGTGCCACTGTGCT---GG---------GCTGGCAACACCGGCGCTCTCCATTAGCT-------------AGAAGGACAAAGAAAGATTTTAATTTAGTGTCAGAGTAAAGAAAATGCCTTCTTCCGTGGAAACTGTAACACTGGCAGGGTTTTAAGTTAATG-GAATCAGATATTTAAAAAGGATCTGCAGAAAGGAA---------------------------------------------TT---AGG------- i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1455240 1087 + 3144229 GTCCTTTTCCTATCCCAC-CCGCTTCCAAGAT-GCCATTTCCAAGACTTACCTGGTTTACAAACACCGTTCTTTTTTGtctg---------aaaact---------tccaagttctcctgaaggcctaggctttgggaaagatcaattcttgatatgca----------------gctacttctgTGTGAAGAGGGAGAGGAGAAGGAGGAAGCGGCAGGGAGAGGAAA-ACCCC--GTGTGTGCACATTCCAAAGCACCCACAGCCACAAACAGCAGATCTGATGTTTTATGATACCTTTTTACTAAATTATTGTGTTTCTTTCCTTCGTTCTACTGGCCCAAGTCCTAGGTGCTTACCAC---CAGCTGATGAGGTGG-------GCTTATTGGATGCCGCCGAGATTTGAAACA--AGAGTCTCCCAAACCAAAGTTTCGACTGTGAAGTCATTTCTTGCTTAAAAGGCCAGAGGAATCTCCTTAAAAAGGAATGGAACATCTTAGC------AC---------TCTGTATCTTTTGGCAGAGACGCAGGCTTCAAAATAAATGTTTTCCTGTAAACGGGTCCTTGCTAAGTGTTAGGGTGAGTGAGTATGTGCTCTTGAAATGTGCTATGGTGGAATGAAAGCTTCAGTCACCTGCAGACATTTCCCCAATGGAGATA-AGC-TTCTTCCAGTCCAGGCCTGGAG-TTTCCCTTACTCCATTGGAAAGGAACCCGGA---CTGGTGATAATGACAAGTCGGCAGTATGGCTTTCATGCACCAGGG-CC-AGTGATGGAAATACCCTATTACCCAAGGCTCGCAGAATGCTATAAAC-TTGGGGATG----GAGGGGCCACAATGCCG-G--GGGAAAAGCACAAAGCAGCCTGGAGACAAGAAACAGACTCAC-CAATCAAACGCTGTGCCTTTTCCCCC-GGTCCC-AGGATGGCTGCCCTCATGATTCTGGTGGAATCCCTGTCCTCCAGCGCCACTGTGCT---GG---------GCTGGCAACGCCGGTGCTCTCCATTAGCT-------------AGAAGGACAAAGAAAGATTTTAATTTAGTGTCAGAGTAAAGAAAATGCCTTCTTCCATGGAAACTGTAACACTGGCAGAGTTTTAAGTTAATG-GAATCAGATATTTAAAAAGGATCTGCAGAAAGGAA---------------------------------------------TT---AGG------- i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96740522 1088 + 98384682 GTCCTTTTCCTATCCCAC-CCACTTCTAAGAT-GCCATTTCCAAGACTTACCTGGTTTACAAACACCGTTCTTTTTTGtctg---------aaaact---------tccaagttctcctgaaggcctaggctttgggaaagaccaattcttgatatgca----------------gctacttctgTGTGAAGAGGGGGAAGAGAAGGAGGAAGTGGCAGGGAGAGGAAA-ACCTCATGTGTGTGCACATTCCAAAGCACCCACAGCCACAAACAGCAGATCTGATGTTTTATGATACCTTTTTACTAAATTAGTGTGTTTCTTTCCTTGGTTCTACTGGCCCAAGTCCTAGGTGCTTACCAC---CAGCTGATGAGGTGG-------GCTTATTGGATGCCGCCGAGATTTGAAACA--AGAGTCTTCCAAACCATAGTTTCGACTGTGAAGTCATTTCTTGCTTAAAAGGCCAGCGGAATCTCCTCAAAAAGGAATGGAACATCTTAGC------AC---------TCTGTATCTTTTGGCAGAGACGCAGGCTTCAAAATAAATGTTTTCCTGTAAACGGGTCCTTACTAAGTGTTAGGGTGAGTGAGTATGTGCTCTTGAAATGTGCTATGGTGGAATGAAAGCTTCAGTCACCTGCAGACATTTCCCCGATGGAGATA-AGC-TTCTTCCAGTCCAGGCCTGGAG-TTTCCCTTACTCCACTGGAAAGGAACCCGGA---CTGGTGATAATGACAAGCCGGCAGTGTGGCTTTCATGCACCAGGG-CC-AGTGATGGAAATACCCTATTATGCAACGCTTGCAGAATGCTATAAAT-CTGGGGACG----GAGGGGCCACAATGCCG-G--GGGAAAAGCACAAAGCAGCCTGGAGACAAGAAACAGACTCAC-CAGTCAAACGCTGTGCCTTTTCCCCC--GTCCC-AGGATGGCTGCCCTCATGATTCTGGTAGAATCCCTGTCCTCCAGCGCCACTGTGCT---GG---------GCTGGCAACGCCGGCGCTCTCCATTAGCT-------------AGAAGGACAAAGAAAGATTTTAATTTAGTGTCAGAGTAATGAAAATGCCTTCTTCCTTGGAAACTGTAACACTGGCAGGGTTTTAAGTTAATG-GAATCGGATATTTAAAAAGGATCTGCAGAAAGGAA---------------------------------------------TT---AGG------- i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8302516 1087 - 10857215 GTCCTTTTCCTATCCCAC-CCGCTTCCAAGAT-GCCATTTCCAAGACTTACCTGGTTTACAAACACCGTTCTTTTTTGtctg---------aaaact---------tccaagttctcctgaaggcctaggctttgggaaaGAGCAATTCTTGATATGCA----------------GCTACTTCTGTGTGAAGAGGGAGAAGAGAAGGAGGAAGCGGCAGGGAGAGGAAA-ACCCC--GTGTGTGCACATTCCAAAGCACCCACAGCCACAAACAGCAGATCTGATGTTTTATGATACCTTTTTACTAAATTATTGTGTTTCTTTCCTTCGTTCTACTGGCCCAAGTCCTAGGTGCTTACCAC---CAGCTGATGAGGTGG-------GCTTATTGGATGCCACCGAGATTTGAAACA--AGAGTCTTCCAAACCAAAGTTTCGACTGTGAAGTCATTTCTTGCTTAAAAGGCCAGTGGAATCTCCTTAAAAAGGAATGGAACATCTTAGC------AC---------TCTATATCTTTTGGCAGAGACGCAGGCTTCAAAATAAATGTTTTCCTGTAAACGGGTCCTTACTAAGTGTTAGGGTGAGTGAGTATGTGCTCTTGAAATGTGCTATGGTGGAATGAAAGCTTCAGTCACCTGCAGACATTTCCCCGATGGAGATA-AGC-TTCTTCCAGTCCAGGCCTGGAG-TTTCCCTTACTCCATTGGAAAGGAACCCGGA---CTGGTGATAATGACAAGCCGGCAGTGTGGCTTTCATGCACCAGGG-CC-AGTGATGGAAATACCCTATTACCCAAGGCTCACAGAATGCTATAAAC-TTGGGGACG----GGGGGGCCACAATGCCG-G--GGGAAAAGCACAAAGCAGCCTGGAGACAAGAAACAGACTCAC-CAATCAAACGCTGTGCCTTTTCCCCC-GGTCCC-AGGATGGCTGCCCTCATTATTCTGGTGGAATCCCTGTCCTCCAGCGCCACTGTGCT---GG---------GCTGGCAACACCGGCGCTCTCCATTAGCT-------------AGAAGGACAAAGAAAGATTTTAATTTAGTGTCAGAGTAAAGAAAATGCCTTCTTCCATGGAAACTGTAACACTGGCAGGGTTTTAAGTTAATG-GAATCAGATATTTTAAAAGGATCTGCAGAAAGAAA---------------------------------------------TT---AGG------- i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15666616 1090 - 23502949 GCCCTTTTCCTATCCCAC-CCGCTTCCAAGAT-GCCCTTTCCAAGACTTACCTGGTTTACAAACACCGTTCTTTTTTGtctg---------aaaact---------tccaagttctcctgaaggcctaggctttgggaaagaccaattcttgatatgca----------------gctacttctgTGTgaagaggaagaagagaaggaggaagcggcagggagaggaaA-ACCTCATGTGTGTGCACATTCCAAAGCACCCACAGCCACAAACAGCAGATCTGATGTTTTATGATACCTTTTTACTAAATTATTGTGTTTCTTTCCTTCGTTCTACTGGCCCAAGTCCTAGGTGCTTACCAC---CAGCTGATGAGGTGG-------GCTTATTGGATGCCGCCGAGATTTGAAACA--AGAGTCTTCCAAACCAAAGTTTCGACTGTGAAGTCATTTCTTGCTTAAAGGGTCAGTGGAATCTCCTTAAAAAGGAATGGAACATCTTAGC------GC---------TCTGTATCTTTTGGCAGAGACGCAGGCTTCAAAATAAATGTTTTCCTGTAAACGGGTCCTTATTAAGTGTTAGGGTGAGTGAGTATGCGCTCTTGAAATGTGCTATGGTGCAATGAAAGCTTCAGTCACCTGCAGACATTTCCCCGATGGAGATA-AGC-TTCTTCCAGTCCAGGCCTGGAG-TTTCCCTTACTCCACTGGAAAGGAACCCGGA---CTGGTGATGATGACAAGCTGGCACTGTGGCTTTCATGCACCAGGG-CC-AGTGATGGAAATAGCCTGTTACCCAAGGCTCGCAGAATGCTATAAAC-TTGGGGACG----GAGGGGCCACTATGCCG-A--GGGAAAAGCACAAAGCAGTCTGGAGACAAGAAACAGACTCAC-CAATCAAACGCTGTGCCTTTTCCCCCCGGTCCC-AGGATGGCTGCCCTCATGATTCTGGTGGAATCCCTGTCATCCGGCACCGCTGTGCT---GG---------GCTGGCAACGCCGGTGCTCTCCATTAGCT-------------GGAAGGACAAAGAAAGATTTTAATTTAGTGTCAGAGTAATGAAAATGCCTTCTTCCATGGAAACTGTAACACTGGCAGGGTTTTAAGTTAATG-GAATCAGATATTTAAAAAGGCTTTGCAGAAAGGAA---------------------------------------------TT---AGG------- i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169949844 1087 + 171630274 GTCC-TTTTCTATCCCAC-CCACTTCCAAGAT-GCTCTTTCCAAGACTTACCTGGTTTACAAACACCGTTATTTTTTGTCTG---------GAAACT---------TACAAGTTCTTCTGAAGGCCGAGGCTTTGGG-AAGACCAATTCTTGATACACAAATTCTCGATATGC-TGCTACTTCTGTGTGAAGAGGGAAAAGAGAAGGAGGAAGCTGCAGAGAGAGGAAAAATCTCCTGTGTGTACACATTCCAAAGCACC--CAGCTGCAAACGGCGGATCTTACGTTTT---ATATCTTTTTACTAAATTATTGTGTTTCTTTCCTTC-TTCTACTGGCCCGAGTCCGAGATGCTTACCGT---GAGCTGATGAGATGA-------GCCCACTGGATGCCACCAAGATTTGAAACA--AGAGTCTCCCAAACCAGAGTTTTGACTGTGAAGTCATTTCTTGCT--AAGAGTCAGT-GAATCTCCCTGAAAAGAAATGG-ATGTCGTAGCATGCTAAC-----GCTATCTGTATCTTTTGGCTGAGACGTATGCGTCCAAATGAGTGTTTGCCTGTAAACGGGTCCTTACTAAGTGTTAGCGTGCATGAGTACGTGCTCTTGAAATGTGCTTTGGTGGAATGAAAGCTTCAGCCACCTGCAGACATTTCCCTGAAGAGGATA-GGC-TTCTTCCAGTCCAG---------CTTCCCTTCCTCCATCGGAAAGGAACCCAGAGATCCTGTGGTAACGACAAGGTGGCAGTGTGGCTTTCATGGACCAATG-CC-AGTGACGGAAATGTCCTA-CAACCAAGGCTCGCAGAATGCTATAAAC-TTGGGGACAGACTGAGGGGCCACAATGGCC-A-GAGGAAAAGCATAAAGCAGCCTGGAGACAAGAAACAGAATCAA-CGATCAAACGCTGTCCCT-GTTACCC-GGTCCC-AGGATGGCTGTCCTCATGATTCTGGCAGAGTCTCCGCCACCCAGAG-------------TGCA-------TCTGGCCATGCTGGTGCT-TCCA-TAGCC-------------AGACAGAC----AAAGATTTTAATTTCGTGTCAGAATAACGAAAATGTCTTCTTTCCTGGAAGCTGTAACACCTGCAGGGTTTTGAGTAAATG-CAATCAGATATTTAACAAGAATCTTCAGGAAGGAA---------------------------------------------TT---GAG------- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1348794 1112 - 2905041 GTCCTTTTTCTACCCCAC-CCACTTCCAAGAT-GCTCTTTCCAAGACTTACCTAGTTTACAAGCACTGTTATTTTTTGTCTG---------AAAACT---------TACAAGTTCTTCTGATGGCCAAGGCTTTGGG-AAGGCCAATTCTTGATACGCAAATTCTCGATATGC-TGCTACTTCTGTTTGAAGACGGAGAAGAGCAGGAGGAAGCTGCAGAGAGAGGAAACATCCCTTGTGTG--CGCATTCCAAAGCACC--CAGCTGCAAATGGCGGATCTTATGTTTTCTGAGACCTTTTTACTGAATTATTGTGTTTCTTTCCTTCTTTCTACTGGCCCAAGTCCCAGATGCCTACTGT---GAGCTGATGAGATGG-------ACCCACTGGATGCCACCAAGATTTGAAACA--AGAGTCTTCCAAACCAGAGTTTTGACTGTGAAGTCATTTCTTGCTTGAAGAGTCGGTGGAATCTCCTTGGAAAGAAATGGAATGTCGTAGC------AC-----GCTATCTGTATCTTTTGGCTGAGATGTATGCCTCCAGATGAGTGTTTTCCTGTAAACGGGCCCTTACTAGGTGTTAGGGTGAGTGAGTATGTGCTCCTGAAATGTGCTTTGGTGCAATGAAAGCTTCAGTCACCTGCGGACATTTCCCTGAAGGAGACA-GGC-TTCTTCCAGTCCAG---------CTTCCCTTACTCCATCGGAAAGGAACCTGGAGACCTTGTGGCAACGACAAGTTGGCAGCGGGGCTTTCATGCACCGATG-CC-AGTGATGGAGACGTCCTA-CAACCAAGGCTTGCAGAGTGCTATAAAC-TTGGGGACAGACTGAGGGGCCACAGTACCC-A-GAGGAAAAGCATAAAGCAGCCTGGAGACAAGAAACAGAATCAA-CAATCAAACGCTGTGCCT--TTACCC-GGTCCC-AGGATGGCTGTCCTCATGATTCTGGTGGCGTCCCTGTCACCCAGAGCCATTGTGCTTCTTGCACAGATTTTCTGGCAATGCTGGTGCTCTCCA-TAGCC-------------AGACAGACAAAGAAAGATTTTAATTTGGTGTCACAATAATGAGAATGTCTTCTTTCCTGGAAGCTGTAACACTTGCAGGGTTTTGAGTAAATG-TAATCAGATATTTAAAAAGAATCTGCAGGAAGGAA---------------------------------------------TT---AAG------- i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1314159 1112 - 2164891 GTCCTTTTTCTATCCCAC-CCACCTCCAAGAT-GCTCTTTCCAAGACTTACCTAGTTTACAAACACTGCTATTTTTTGTCTG---------AAAACT---------TACGAGTTCTTCTGAAGGCTGAGGCTTTGGG-AAGACCAATTCTTGGTACACAAATTCTTGATATGC-TGCTACTTCTGTGTGAAGAGGGAGAAGAGAAGGAGGAAGCTGCAGAGAGAGGAAAAACACCCTGTGTGTGCACATTCCAAAGCACC--CAGCTGCAAACGGTGGATCTTATGTTTTCTGAGACCTTTTTACTAAATTATTGTGTTTCCTTCTTTCTTTCTACTGGCCCAAGTCCGAGATGCTTACTGT---GAGCTGATGAGATGG-------GCCCACTGGATGCCGCCAAGATTTGAAACA--AGAATCTTCCAAACCAGAGTTTTGACTGTGAAGTCATTTCTTGCTTGAAGAGTCAGTGGAATCTTCTTGAAAAGAAATGGAATGTCGTAGC------AC-----ACTATCTGTATCTTTTGGCTGAGACGTATGCTTCCAAATGAGTGTTTTCCTGTAAACGGGCCCTTACTAAGTGTTAGGGTGAGTGAGTATGTGCTCTTGAAATGTGCTTTGGTGGTGTGAAAGCTTCAGTCACCTGCAGACATTTCCCTCAAGGAGATA-GGC-TTCTTCCAGTCCAG---------CTTCCCTTCCTCCATCGGAAAGGAACCCGGAGACCTTGTGGTAACAGCAAGTTGGCAGCGTGGCTTTCATGCACCAATG-CC-AGTGATGGAAATGT-CTA-CAACCAAGGCTCGCAGAATGCTGTAAAC-CTGGGGACAGACTGAGGGGCCACAATGCCC-A-GAGGAATGGCATAAAGCAGCCTGGAGACAAGAAACAGAATCGA-CAATCAAACGCTGTGTGT--TTACCT-GGTCCC-AGGATGGCTGCCCTCATGATTCTGGCGTAATCTCCGTCACCCAGAGCCATTGTGCTTCTGGCACAGTTT-TCTGGCAATGCTGGTGCTCTCCA-TAGCC-------------AGACAGACAAAGAAAGATTTTAATTTAGTGTCAGAATAATGAAAATGCCTTCTTTCCTGGAAGCTGTAACACTTGCCGTGTTTTGAGTAAATG-CAATCAGATATTTAAAAAGAATCTGCAGGAAGGAA---------------------------------------------TT---AAG------- i cebCap1.NW_016107695v1 I 105 C 0 s aotNan1.NW_018494782v1 1560493 1102 - 1813869 GTCCTTTTTCTAGCCCAC-CCACTTCCAAGAC-GCTCTTTCTAAGAGTTACCTAGTTTACAAACACCGTTATTTTTTGTCTG---------AAAACT---------TACGAGTTCTTCTGAAGGCCGAGGCTTTGAG-AAGACCAATTCTTGATACGCAAATTCTTGATATGC-TGCTACTTCTGTGTGAAGAGGGTGAAG---AGGAGGAAGCTGCAGAGAGAGGAAAAATCCCC-GTGTGTGCACATTCCAAAGCACC--CAGCCACAAA---CGGATCTTATGTTTTATGAGACCTTTTTACTAAATTATTGTGTTTCTTTCCTTCTTTCTGCTGGCCCAAGTCCGAGATGCTTACAGT---GAGCTGACGAGATGG-------GCCCACTGGACGCCGCCAGGATTTGAAACA--AGAGTCTTCCAAACCAGAGTTTTAACTGTGAAGTCATTTCTTGCTCAAAGAGTCAGTGGAATCTCCTTGAAAAGAAATGGAGTGTCATAGC------AC-----GCTACCTGTATCTTTTGACTGAGACGTATGCTTCCAAATGAGTGTTTTCCTGTAAATGGGTCTTTACTAAGTGTCAGGGTGACTGCGTATGTGCTCTTGAAATGTGCTTTGGTGGAATGAAAGCTTCCGTCACCTGCAGGCATTTCCATGAAGGAGATA-GCC-TTCTTCCAGTCCAG---------CTTCCCTTACTCCATCAGAAAGGAACCCGGAGACCCTGTGGTAA---CAAGTTGGCAGCGTGGCTTTCATGCACCAATG-CC-AGTGATGGAAATGTCCCA-CAACCAAGGCTCTCAGAATGCTACAAAC-CTGGGGACGGACTGAGGGGCCACAATGCCC-A-GAGGAAAAGCATGAAGCAGCCTGGAGACAAGAAACAGACTCAA-CAATCAAACGTGGTGCCT-TTTACCC-GGTCCC-AGGATGGCCGTCCTCGTGATTCTGGTGGAGTCTCCATCACCCAGAGCCATTGTGCTTCTGGCACAGTTTTTCTGGCAATGCTGGTGCTCTCCA-TAGCC-------------AGATAGACAAAGAAAGATTTTAATTTAGTGTCAGAATAATGAAAATG---TCTTTCCTGGAAGCTGTAACACTTGCAGGGTTTTGAGTAAATG-CAATCAGATATTTAAAAAGAATCTGCAGGAAGGAA---------------------------------------------TT---AAG------- i aotNan1.NW_018494782v1 C 0 C 0 s canFam3.chr1 56221571 1049 + 122678785 --GCCTTTCCTACCCCATGAAATTTCCAAGA---CTCTTTTCAAA---TACCTAATTTTCAAACTCCGTTTCCCTTTCTTTTAACTCTTCCAAAACT---------TTCAAGTTTTCCGAAAGCCTTCAACATTGGG-GAGAC--ATCCTTGGGAAGCT-----------TGCAGGCCACTTCCATGGGAAAGAGGAGATG-------GGACCCTGCAG---GAGGGAC-ACTCC-TGAGCGTGTGGGTCTCACGCCAGC--CAGCCACA---GGTGCATCTGGC---CTATGGTATCTTCTCTTTGCATT-CTACACTTCCTTCCTTC-TTTTGTTGGCCAAAATCTTAGATGCTTACCAT---GGGCCATTGAGACAG-------ATTTG-TGGGTACTGCCAAGATTGGAAACAGCAAAATGTTCCAAACCAAGCTTTTGACTACTAAGCCCTTTTTTGCTT----GGCCAGTGGGATAG-CTTGGAAAGGAAC--ACCATCTCAGC------ACAGCACACCATTGATACCTTCTGGCTGAAAAGTAGATTTCTCACTGAACGATTTCCCAGACGAGGGTCCTCAGTGAGTGCCGAGGTGAGCG----TGTAACCTCTAGTGGTGCTCTCACGA--------CTTCTGTCAGTGGTGCATGTTTTCCCACACGAGGTACGGA-TTCTGCAAGTCCAGGCGTGAAA-TTTCCCTGAAACC-TGGAGAAAGAACTCAGTGTTCCAGTGGCACTGACACATTGTCAGCTTGGCTTCCATACACCATGGTCC-AGTGACGGGAACAC-CTAGTACCCAAGGCATACAGAGTGCCGTAAATAGCGAGGCCG----AAGGTCCCAGGGTTCCCTG-AGGCAAAACCATACAGCAGCCTGGAGACAGGAGACAGACTTGA-CAACCCAATGTTCAGCCTTTTCCCAT---CCCA-AGGGTTTCTGCTTTAGTTACCTGGATTGAGTTCCAGCCA-CCAGCAC------------GT---------TCC-----------TGTTCTCCATTACGG-------------GGAAGTAGAGAGAAGCACTTTGACTCAGTGTCTGAATAATGCAGAAGGCTTCAGCCATAGAAGCCAT-TTACCTGTAGAATGCCAGGTGAATT-AGCATAGATATTAATAAGGAATCTATAAAAAATAA---------------------------------------------TTTTCAgg------- i canFam3.chr1 C 0 I 192 s dasNov3.JH569188 646196 1176 + 760995 ACTCTTGCTTTATCCCAT-GAATTTCCAAGACAGTCTTTTTGAAGACACACCTAACTTGTGAACTCCATGCTctcttccttt---------taatctcttccaaaacctaaatgctcttaatggattcggcttttgg-aagaaaagtaattacaaatct-----------tacaggctactGCCGTGTGAAAGGGGAGAAGAGAAAGAGGAAACTATAGGGAGATGGAA-AA-----AGATGTGAACATTTCAAAACATC--CAGCCATAAATAGACAATATCGT-TTTTATAATATCTTTTCCTTAAATTATTATATTGCTTTCCTTCTTTTCGCTGGCCGATATTCTAGATGATTACCGT--GGAACTGTTGAGAAGGCTAAATTGTTCATGAGATGCTGCTAAGATCTGAAGCAGTAGAGTATTCCAAACCAAACTTTTCACTACTAAGCCATTTCTTACTTAAAAAGCCAGTGGAATAAGTCTAAAGAGGAATAGAACATCTTAGT------AC---------TC--TATCTTTTGGCTGAAACATATGTTTCAAAATGAATGGTTTCCCATAAAAGGATCCTCCTTGAGTGCTAGGGTACATGAGTGTGTAATCTTGCACAGTGCCATGATGAAATTAAAGCTTAAATCACCTGTAGACATTTTCCCAAAGGATATA-AGTATTCTTCAAGTCTAAGGCTGAGA-TTTCCCTTACTCTGTAAGAAAGGAACTCAACAACCTGGTGATGATGATATGTTGGCAGCTTGGCTTTGCTACAACATAT-CCTAAGGATGGAAATACCCTGTTACCCAAGACTTGCAGAAAGCTAGAAGCATCAAGGTCT----AAGGTTCCACAGTGCCT-AGAGGAAAAAGCATAAAGTAGAAGGAAGAAAGGAAACAGAGTGGCAAAATCAAACGATGTGCTTTTTTTTTC-CATCCCGAGGCTTTCTGTTTTAGTGATGTTGGTGATGGTCCAGTCACCCAAAGTCTCTGTGCC---AG---------TCTAATAACATTCATGTTCTCCATCACCTGCGAATAATATTGGGAAGTAAAAAGAAGTATTTTAATTTAGTGCCTGAGCAATGAAAATGGCTTCTGCTGTAGAAACCATAATCCTTGT-GGATGCGAAATGAATTCAAAGTGGATA--AAAAAGGAATCTGTGGAAAACAAATTTAAAAATTTCCTGTCTCCTCTCGTCCCTACTCAATAAGAATTTT---AAATGCAATA i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I a score=497397.000000 s hg38.chr6_KB021644v2_alt 162676 47 + 185823 AAAGAATGCTTCAAAAACATTTTAAATGCTGCTTAGTAGAGGCTCAG s panTro5.chr6 1783640 47 - 175400573 AAAGAATGCTTCAAAAACATTTCAAATGCTGCTTAGTAGAGGCTCAG i panTro5.chr6 C 0 T 4127 s panPan2.chr6 171852739 47 + 173848474 AAAGAATGCTTCAAAAACATTTCAAATGCTGCTTAGTAGAGGCTCAG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11535646 47 - 12463322 AAAGAATGCTTCAAAAACATTTCAAATGCTGCTTAGTAGAGGCTCAG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156368041 47 + 157873769 ACAGAATGCTTCAAAAACATTTTAAATGCCGCTTAGTAGAGGCTCCG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170396308 46 + 172585720 A-AGAATGCTTCAAAAACATTTTAAATGCTGCTTAGTAGATGCTCAA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169139591 46 - 170955103 A-AGAATGCTTCAAAAACATTTTAAATGCTGCTTAGTAGATGCTCAA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8425945 46 + 10161646 A-AGAATGCTTCAAAAACATTTTAAATGCTGCTTAGTAGATGCTCAA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1456327 46 + 3144229 A-AGAATGCTTCAAAAACATTTTAAATGCTGCTTAGTAGATGCTCAA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96741610 46 + 98384682 A-AGAATGCTTCAAAAACATTTTAAATGCTGCTTACTAGATGCTCAA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8303603 46 - 10857215 A-AGAATGCTTCAAAAACATTTTAAATGCTGCTTAGTAGATGCTCAA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15667706 46 - 23502949 A-AGAATGCTTCAAAAAACTTTTAAATGCTGCTTAGTAGATGCTCAA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169950931 47 + 171630274 AAAGAATGCTTCAAAAACATTTTAAATGCTGTTTAGTAGAGGCTCAG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1349906 47 - 2905041 AAAGAATGCTTCAAAAACATTTTAAATGCTGCTTAGTAGAGGCTCCG i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1315271 47 - 2164891 AAAGAATGCTTCAAAAACATTTTAAATGCTGCTTAGTAGAGGCTTAG i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1561595 47 - 1813869 AAAGAATGCTTCAAAAACATTTTAGATGCTGCTTAGTAGAGGCTCAG i aotNan1.NW_018494782v1 C 0 C 0 s canFam3.chr1 56222812 47 + 122678785 AAAGAGTGCTTTGAAATTTTTTAAAAAGCTATTTAGCAGAAGTTCAG i canFam3.chr1 I 192 C 0 s dasNov3.JH569188 647372 45 + 760995 AAAGAGTGTTT--AAAAATTTATCAGTGTTCTTTAGTAGAGGGTCAC i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I a score=1097833.000000 s hg38.chr6_KB021644v2_alt 162723 122 + 185823 TGTTCACCTAAATCAAAG--ATGT--TTTCCCCATATATTTATTTTAATAATTTAAAATATGTC----TAC------ATGTACTAAT----TACCTATATTTA----TCTA---------------------------------------------------------------------TCT-------------GAATTT-----------------------TTTCTTCAATGACCAATATACAAT s panTro5.chr6 1779560 122 - 175400573 TGTTCACCTAAATCAAAG--ATGT--TTTCCCCATATATTTATTTTAACAATTTAAAATATGTC----TAC------ATGTGCTAAT----TACCTATATTTA----TCTA---------------------------------------------------------------------TCT-------------GAATTT-----------------------TTTCTTCAATGACCAATATACAAC i panTro5.chr6 T 4127 C 0 s panPan2.chr6 171852786 122 + 173848474 TGTTCACCTAAATCAAAG--ATGT--TTTCCCCATATATTTATTTTAACAATTTAAAATATGTC----TAC------ATGTGCTAAT----TACCTATATTTA----TCTA---------------------------------------------------------------------TCT-------------GAATTT-----------------------TTTCTTCAATGACCAATATACAAT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11535693 119 - 12463322 TGTTCACCTAAATCAAAG--ATGT--TTTCCCCATATATTTA---TAATAATTTAAAATATGTC----TAC------ATGTACTAAT----TACCTATATTTA----TCTA---------------------------------------------------------------------TCT-------------GAATTT-----------------------TTTCTTCAATGACCAATATACAAT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156368088 114 + 157873769 TGTTTACCTAAATCAAAGATATGC--TTTCCCTATATATTTATTTTAATAATTTAAAATATGTC----TAC------ATGTACTAA--------------TTA----TCTA---------------------------------------------------------------------TCT-------------GAATTT-----------------------TTTCCTCAATGACCAATATACAAT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170396354 124 + 172585720 TGTTTACCTAAATCAAAG--ATGTGGTTTGCCCATATATTTATTTTAATAATTTAAAATATGTC----TAC------ATGTACTAAT----TATCTATATTTA----TCTA---------------------------------------------------------------------TCT-------------GAATTT-----------------------TTTCCTCGATGACCAATACACAGC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169139637 124 - 170955103 TGTTTACCTAAATCAAAG--ATGTGGTTTGCCCAtatatttattttaataatttaaaatatgtc----tac------atgtactaat----tatctatattta----tCTA---------------------------------------------------------------------TCT-------------GAATTT-----------------------TTTCCTCAATGACCAATACACAAC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8425991 124 + 10161646 TGTTTACCTAAATCAAAG--ATGTGGTTTGCCCATATATTTATTTTAATAATTTAAAATATGTC----TAC------ATGTACTAAT----TATCTATATTTA----TCTA---------------------------------------------------------------------TCT-------------GAATTT-----------------------TTTCCTCAATGACCAATACACAAC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1456373 124 + 3144229 TGTTTACCTAAATCAAAG--ATGTGGTTTGCCCATATATTTATTTTAATAATTTAAAATATGTC----TAC------ATGTACTAAT----TATCTATATTTA----TCTA---------------------------------------------------------------------TCT-------------GAATTT-----------------------TTTCCTCAATGACCAATACACAAT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96741656 124 + 98384682 TGTTTATGTAAATCAAAG--ATGTGGTTTGCCCATATATTTATTTTAATAATTTAAAATATGTC----TAC------ATGTACTAAT----TATCTATATTTA----TCTA---------------------------------------------------------------------TCT-------------GAGTTT-----------------------TTTCCTCAATGATCAATATGCAAT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8303649 119 - 10857215 TATTTACCTAAATCAAAG--ATGTGGTTTGCCCATATA-----TTTAATAATTTAAAATATGTC----TAC------ACGTACTAAT----TATCTATGTTTA----TCTA---------------------------------------------------------------------TCT-------------GAATTT-----------------------TTTCCTCAATGACCAATACACAAT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15667752 124 - 23502949 CGTTTACCTAAGTCAAAG--ATGTGGTTTGCCCATGTATTTATTTTAATAATTTAAAATATGTC----TAC------ATGTACTAAT----TATCTATATTTA----TCTA---------------------------------------------------------------------TCC-------------GAATTT-----------------------TTTCCTCAATGACCAATACACAAT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169950978 122 + 171630274 TGTCTACTTAA--TCAAG--ATATGATTTCCCAGtttatttattttaataattttaaatatGTC----TAC------ATGCACTAAT----TTTCTATGTTTA----TCTA---------------------------------------------------------------------TCT-------------GAGTTT-----------------------TTTCCTCAATGAGCAATGTACAAT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1349953 123 - 2905041 TGTTTACTTA-----AGG--ATATGATTTCCCaatttatttattttaataatttaaaatCTGTC----TAC------AGGTACTAAT----TTTCTATATTTATCTGTCTA---------------------------------------------------------------------TCT-------------GAATTT-----------------------TTTCCTCAGTGAGCAATGTACAAT i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1315318 124 - 2164891 TGTTTACTTAAATCAAAG--ATATGATTTCCCAATTTATTTATTTTAACAATTTAAAATATATC----TAC------ATGTACTAAT----TTTCTATATTTA----TCTA---------------------------------------------------------------------TCT-------------GAATTT-----------------------TTTCCTCAATGAGCAATGTACAAT i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1561642 124 - 1813869 TGTTTACTTAAAACAAAG--ATATGATTTCCCAATTTATTTATTTTAATAATGTAAAATATGTC----TAC------ATGTACTGAT----TTTCTATATTTG----TCTG---------------------------------------------------------------------TCT-------------GAGTTT-----------------------TTTCCTCAATGAGCAATGTACAAT i aotNan1.NW_018494782v1 C 0 C 0 s canFam3.chr1 56222859 216 + 122678785 AATTCAAATAAACCAAAG--ATGTGATTTT----TATGTTTACTTAAATAATTCAAAATGTACC----TACTCACATATATACCAGC----TGTGTGTATATA----TCCACATATGCACGCATGTATATTATCCTATTATATTTATTATGTACAAATGCTAtgaatccttgtgaatccttgt-------------gaatctcttgtgCTGTAAGTCATAGTACATTTCCCCGGTGAACCATGCACA-- i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 647417 142 + 760995 TCTTTAAATAAATCAAAG--ATATGATTTCCTTATTTATTTCTTTT---AATTCAAAAGGCATCTAAATAC------ATATAACAGTAGAATATGCATGCAAA----TCTC---------------------------------------------------------------------TCTCTGTCACACACACAATTAT-----------------------TTTCTTCAATGAGTAGGTTAAATT i dasNov3.JH569188 C 0 I 870 e otoGar3.GL873575 10988881 3627 - 12073884 I a score=1680749.000000 s hg38.chr6_KB021644v2_alt 162845 166 + 185823 GAGTGGTATATACTGCATGTGTACTGTTTTAAAGACATACTGTATATTTAGGAAAA-GGGGTTTCACATTTCTGCCAC-TTTGTGGATCCCTCTGCTTGGCTATCTTTTT---------AAATTTAT---------AGGCCTTATTTCCCATTAAGACTGGAACACCTTCCAAAATATTT--T--CTTTT s panTro5.chr6 1779682 166 - 175400573 GAGTGGTATATACTGCATGTGTACTGTTTTAAAGACATACTGTATATTTAGGAAAA-GGGGTTTCACATTTCTGCCAC-TTTGTGGATCCCTCTGCTTGGCTATCTTTTC---------AAATTTAT---------AGGCTTTATTTCCCATTAAGACTGGAACACCTTCCAAAATATTT--T--CTTTT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171852908 167 + 173848474 GAGTGGTATATACTGCATGTGTACTGTTTTAAAGACATACTGTATATTTAGGAAAAGGGGGTTTCACATTTCTGCCAC-TTTGTGTATCCCTCTGCTTGGCTATCTTTTT---------AAATTTAT---------AGGCTTTATTTCCCATTAAGACTGGAACACCTTCCAAAATATTT--T--CTTTT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11535812 166 - 12463322 GAGTGGTACATACTGCATGTGTACTGTTTTAAAGACATACTGTATATTTAGGAAAA-GGGGTTTCACATTTCTGCCAC-TTTGTGGATCCCTCTGCTTGGCTATCTTTTT---------AAATTTAT---------AGGCCTTATTTCCCATTAAGACTGGAACACCTTCCAAAGTATTT--T--CTTTT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156368202 164 + 157873769 GAGTGGTATATACTGCATGTGTACTGTTTTAAAGACATACTGTATATTTAGGAAAA-GAGGTTTCACATTTCTGCCAC-TTTGTGGATCCCTCTGCTTGGCTATCTTTTT---------AAATTTAT---------AGGCCTTATTTCCCACTAAGACTAGAACAGCTTCCAAAATATAT------ATTT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170396478 166 + 172585720 GAGTGGCATATGCTGCGTGTGTACTGTTTTAAAGACGTAATGTGTATTTAGGAAAA-GAGCTTTCACATTGCTGCCAC-TTTGTGGATCACTCTGCTTGGCTATCTTTTT---------AAATTTAT---------AGGCCTTATTTCCCATTAAGACTGGAACACCTTCCAAAATATTT--T--CCTTT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169139761 166 - 170955103 GAGTGGCAAATGCTGCGTGTGTACTGTTTTAAAGACATAATGTGTATTTAGGAAAA-GAGCTTTCACATTGCTGCCAC-TTTGTGGATCACTCTGCTTGGCTATCTTTTT---------AAATTTAT---------AGGCCTTATTTCCCATTAAGACTGGAACACCTTCCAAAATATTT--T--CTTTT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8426115 166 + 10161646 GAGTGGCATATGCTGCGTGTGTACTGTTTTAAAGACATAATGTGTATTTAGGAAAA-GAGCTTTCACATTGCTGCCAC-TTTGTGGATCACTCTGCTTGGCTATCTTTTT---------AAATTTAT---------AGGCCTTATTTCCCATTAAGACTGGAACACCTTCCAAAATATTT--T--CTTTT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1456497 166 + 3144229 GAGTGGCATATGCTGCGTGTGTACTGTTTTAAAGACATAATGTATATTTAGGAAAA-GAGGTTTCACATTGCTGCCAC-TTTATGGATCACTCTGCTTGGCTATCTTTTT---------AAATTTAT---------AGGCCTTATTTCCCATTAAGACTGGAACACCTTCCAAAATGTTT--T--CTTTT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96741780 166 + 98384682 GCGTGACATATGCTGCGTGTGTACTGTTTTAAAGACATAATGTATATTTAGGAAAA-GAGGTTTCACATTTCTGCCAC-TTTGTGGATTGCTCTGCTTGGCTATCTTTTT---------AAATTTAT---------AGGCCGTATTTCCCATTAAGACTGGAACACCTTCCAAAATGTTT--T--CTTTT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8303768 166 - 10857215 GAGTGGCATATGCTGCGTGTGTACTGTTTTAAAGACATAATATATATTTAGGAAAA-GAGCTTTCACATTGCTGCCAC-TTTATGGATCACTCGGCTTGGCTATCTTTTT---------AAATTTAT---------AGGCCTTATTTCTCATTAAGACTGGAACACCTTCCAAAATATTT--T--CTTTT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15667876 166 - 23502949 GAGTGACATATGCTGCGTGTGTACTGTTTTAAAGACATAATGTATATTTAGGAAAA-GAGGTTTCACATTGCTGCCAC-TTTGTGGATCGCTCTGCTTGGCTATCTTTTT---------AAATTTAT---------AGGCCTTATTTCCCATTAAGACTGGAACACCTTCCAAAATATTT--T--CTTTT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169951100 163 + 171630274 GCATAGCATGTACTGCATTTGTACTATTTTAAAGACATAATGTATATTTAGGAAAA-CAGGGTTCATGTTTCTGCCGC-TTTGTGGATCCCTCTGCTTTGCTACATTTTT---------AGATTTAT---------AGGCCTTAATTTCCG-TAAGATTGGAACACCTTCCAAAATATTC------TTTT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1350076 169 - 2905041 GAGTAGCATGTACGGCATTCATACTATTTTAAAGACATAATGTATATTTAGGAAAA-GACGATTTATGTGTCATCCATGTTTGTGGATCCCTCTGCTTTGCTACATTTTG---------AGACTTAT---------AGGCCTTAATTTCCATTAAGATTGAAACACCTTCCAAAATATTCTTT--TTTTT i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1315442 165 - 2164891 GAGTAGCATGTACTGCATTCGCACTATTTTAAAGTCACAATGTATATTTAGGAAAA-CAGGGTTCATGTTTCTGTCAC-TTTGTGGATCCCTCTGCTTTGCTACATTTTG---------AGATTTAT---------GGGCCTTAATTTCCATTAAGATTGGAACAGCTTCCAAAATATTC-----TTTTT i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1561766 165 - 1813869 GAGGAGCAGGTACTGCATGTGTACTATTTTAAAGACATAATGTGTATTTAGGAAAA-GAGGGTTCACGTTTCTGCCAC-TTTGTGGATCCCTCTGCTTTGCTACATTTTT---------AGATTTAT---------AGGCCTTAATTTCCATTAAGATTGGAACACCTTCCAAAATATTC-----TTTTT i aotNan1.NW_018494782v1 C 0 C 0 s canFam3.chr1 56223075 174 + 122678785 GGAGAACAGGTACGG-ATGCTCACTATTTAAAGGAGAACGTGTACATTTAGGGAAA-GAAGTTTCATGTTTGTGTTAC-TTTCTGGATGTCTCTGCCTGGTTAACCATTTCACGTTATAGGGTCTAC---------AGGTCTTCATCCTCACTGAGGCAGAAACACCTTCCAAAATGTGC--T--CTTCC i canFam3.chr1 C 0 I 187 s dasNov3.JH569188 648429 177 + 760995 GAGTAACATACACAGCACTTGTGGTATTTAAAAGAGAGAAGGTATATTTTGGAAAA-GAGGTTTCATATTTCTGTTAC-TTTCTGGATTCCTCAGCTTACTTACTTATTT---------TACTTTACAAGGTCTTGAGGCCTTCATTCTCATTAAGACTGGATCATCTAGCAAAACAATT--TTGCTTTT i dasNov3.JH569188 I 870 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I a score=618497.000000 s hg38.chr6_KB021644v2_alt 163011 68 + 185823 TTTAGACATCTATAATAAGATGAAATAACAG--TAGT-GGCAAATTCACTGCGCTCTTGAAGCATCTGTTG s panTro5.chr6 1779848 68 - 175400573 TTTAGACATCTGTAATAAGACAAAATAACAG--TAGT-GGCAAATTCACTGCGCTCTTGAAGCATGCGTTG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171853075 68 + 173848474 TTTAGACATCTACAATAAGACGAAATAACAG--TAGT-GGCAAATTCACTGCGCTCTTGAAGCATGCGTTG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11535978 68 - 12463322 TTTAGACATCTATAATAAGACGAAATAACAG--TAGT-GGCAAATTCACTGTGCTCTTGAAGCATGCATTG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156368366 68 + 157873769 TTTAGACATCTATAATAAGACAAAATAACAG--TAGT-GGCAAATTCACCGCACTCTTGAAGCATGCATCG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170396644 68 + 172585720 TTTATACATCTATAATAAGACCAAATAACAG--TAGT-GGCAAATTCACCATGCTCTTGAAGCATGCATTG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169139927 68 - 170955103 TTTATACATCTATAATAAGACCAAATAACAG--TAGT-GGCAAATTCACCATGCTCTTGAAGCATGCATTG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8426281 68 + 10161646 TTTATACATCTATAATAAGACCAAATAACAG--TAGT-GGCAAATTCACCATGCTCTTGAAGCATGCATTG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1456663 68 + 3144229 TTTATACATCTATAATAAGACCAAATAACAG--TAGT-GGCAAATTCACCATGCTCTTGAAGCATGCGTTG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96741946 68 + 98384682 TTTGTACATCTATAATAAGACCAAATAACAG--TAGT-GGCAAATTCACTGTGCTCTTGAAGCATGCGTTG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8303934 68 - 10857215 TTTATACGTCTATAATAAGACCAAATAACAG--TAGT-GGCGAATTCACCATGCTCTTGAAGCATGCGTTG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15668042 68 - 23502949 TTTGTACATCTATAATAAGACCAAATAACAG--TAGT-GGCAAATTCACTGTGCTCTTGAAGCATGCGTTG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169951263 69 + 171630274 TTTAGACATCTATAATAAGATAAAATAACAG--TAGCAGGCAGAGTCACTGCACTTTTGAAGTCTGGGTTG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1350245 69 - 2905041 TTTGGACATCTATAATAAGACACAATAACAG--TCGTAGAAAGAATCCCTGCACTTTTGAATCGCGTGTTG i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1315607 69 - 2164891 TTCAGGCATCTATAATAAGACAAAATAACAG--TAGTAGGCAGAATCCCTGCACTTTTGAAGCGTGTGTTG i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1561931 69 - 1813869 TTTAAACATCTATAATAAGACAAAATAACAG--TAGTAGGCCGAATCCCTGCACTTTTGAAGCGTGTGCTG i aotNan1.NW_018494782v1 C 0 C 0 s canFam3.chr1 56223436 69 + 122678785 TTTAAGCATCTATGATAAGAATAAACATCAG--TATTAGCCAAAATCATGGCAATTCTGTATTTTCAATTG i canFam3.chr1 I 187 I 572 s dasNov3.JH569188 648606 62 + 760995 TCCAGTCCTC---AATAAGAAGAAACAACTGTATAAT-TGCAA-----CTGCTGTTTTGGTGTAAGCATAA i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I a score=2777929.000000 s hg38.chr6_KB021644v2_alt 163079 296 + 185823 GAGCTCTCTCTTTGTGGGG-----GTAAACCAGCCG-CCAAAC--AGATCACCTGCACGGAAAGTCCTTTGCTCATTTTGTGGATCTGAGTTGCTGCCAACTTTTCCGGGTGTTCATGTTCAGAAGGAGAAGCAAGATGGCCCTGTTAAAAAGTCCTACATGGCATTTGTCAAGGATGTTCTGCTCAGGAGAGAGACTGAGGCTTCCGGTGAGAAAACCCTGCAGGCTGGGGAAGTGCACCTCGAGCTGA-CCCCTTGTTC-AGGGAGCTGATGAAGGCACATGCCATGGGAATGAGAAAGCCACT----- s panTro5.chr6 1779916 296 - 175400573 GAGCTCTCTCTTTGCAGGG-----GTAAACCAGCCG-CCAAAC--AGATCACCTGCGCGGAAAGTCCTTTGCTCATTTTGTGGATCTGAGTTGCTGCCAACTTTTCCGGGTGTTCATGTTCAGAAGGAGAAGCAAGATGGCCCTGTTAAAAAGTCCTACATGGCATTTGTCAAGGATGTTCTGCTCAGGAGAGAGACTGAGGCTTCCGGTGAGAAAACCCTGCAGGCTGGGGAAGTGCAGCTCGAGCTGA-CCCCTTGTTC-AGGGAGCTGATGAAGGCACATGCCATGGGAATGAGAAAGCCACT----- i panTro5.chr6 C 0 n 0 s panPan2.chr6 171853143 296 + 173848474 GAGCTCTCTCTTTGCAGGG-----GTAAACCAGCCG-CCAAAC--AGATCACCTGCGCGGAAAGTCCTTTGCTCATTTTGTGGATCTGAGTTGCTGCCAACTTTTCCGGGTGTTCATGTTCAGAAGGAGAAGCAAGATGGCCCTGTTAAAAAGTCCTACATGGCATTTGTCAAGGATGTTCTGCTCAGGAGAGAGACTGAGGCTTCCGGTGAGAAAACCCTGCAGGCTGGGGAAGTGCAGCTCGAGCTGA-CCCCTTGTTC-AGGGAGCTGATGAAGGCACATGCCATGGGAATGAGAAAGCCACT----- i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11536046 297 - 12463322 GAGCTCTCTCTTTGCGGGG-----GTAAACCAGCCG-CCAAAC--AGATCACCTGCGCGGAAAGTCCTTTGCTCATTTTGTGGATCTGAGTTGCTGCCACCTTTTCCGGGTGTTCATGTTCAGAAGGAGAAGCAAGATGGCCCTGTTAAAAAGTCCTACATGGCATTTGTCAAGGATGTTCTGCTCAGGAGAGAGACTGAGGCTTCTGGTGAGAAAACCCTGCAGGCTGGGGAAGTGCAGCTCGAGCTGACCCCCTTGTTC-AGGGAGCTGATGAAGGCACATGCCATGGGAATGAGAAAGCCACT----- i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156368434 296 + 157873769 GAACTCTCTCTTTGCAGGG-----ATAAACCAGCCA-CCAAAC--AGATCACCTGCATGGAAAGTCCTTTGCTCATTTTGTGGATCTGAGTTGCTGCCAACTTTTCCGTATGTTCATGTTCAGAAGGAGAAGCAAGATGGCCCTGTTAAAAAGTCCTACATGGCATTTGTCAAGGACATTCTGCTCAGGAGAGAGACTGAGGCTTCAGGTGTGAAAACCCTGCAGGCTGGGGAAGTGCAGCTCGAGCTGA-CCCCTTGTTT-GGGGAGCTGATGAAGGCACATGCCGCGGGAATGAGAAAGCTACT----- i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170396712 296 + 172585720 GAACTCTCTCTTTGCACGG-----GTAAACGGGCCG-CCAAAC--AGATCACCTGCGTGGAAAGTCCTTTGCTCATTTTGTGGATCTGAGTTGCTGCCAACTTTTCCGTGTGCTCATGTTCTGAAGGAGAAGCAAGACGGCCCTGTTAAAAAGTCCTACTTGGCATTTGTCAAGGACGTTCTGCTCAGGAGAGAGACTGAGGCTTCATGTGTGAAAACCCTGCAGGCTGGGGAAGTGCAGCTCGAGCTGA-CCCCTTGTTC-GGGGAGCTGATGAAGACACACACCACGGGAATGAGAAAGCTACT----- i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169139995 296 - 170955103 GAACTCTCTCTTTGCACGG-----GTAAACGGGCCG-CCAAAC--AGATCACCTGCGTGGAAAGTCCTTTGCTCATTTTGTGGATCTGAGTTGCTGCCAACTTTTCCGTGTGCTCATGTTCTGAAGGAGAAGCAAGACGGCCCTGTTAAAAAGTCCTACTTGGCATTTGTCAAGGACGTTCTGCTCAGGAGAGAGACTGAGGCTTCATGTGTGAAAACCCTGCAGGCTGGGGAAGTGCAGCTCGAGCTGA-CCCCTTGTTC-GGGGAGCTGATGAAGACACACACCACGGGAATGAGAAAGCTACT----- i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8426349 296 + 10161646 GAACTCTCTCTTTGCACGG-----GTAAACGGGCCG-CCAAAC--AGATCACCTGTGTGGAAAGTCCTTTGCTCATTTTGTGGATCTGAGTTGCTGCCAACTTTTCTGTGTGCTCATGTTCTGAAGGAGAAGCAAGACGGCCCTGTTAAAAAGTCCTACTTGGCATTTGTCAAGGACGTTCTGCTCAGGAGAGAGACTGAGGCTTCATGTGTGAAAACCCTGCAGGCTGGGGAAGTGCAGCTCGAGCTGA-CCCCTTGTTC-GGGGAGCTGATGAAGACACACACCACGGGAATGAGAAAGCTACT----- i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1456731 296 + 3144229 GAACTCTCTCTTTGCACGG-----GTCAACGAGCCG-CCAAAC--AGATCACCTGCACGGAAAGTCCTTTGCTCATTTTGTGGATCTGAGTTGCTGCCAACTTTTCCGTGTGCTCATGTTCTGAAGGAGAAGCAAGATGGCCCTGTTAAAAAGTCCTCCTTGGCATTTGTCAAGGACGTTCTGCTCAGGAGAGAGACTGAGGCTTCATGTGTGAAAACCCTGCAGGCTGGGGAAGTGCAGCTCGAGCTGA-CCCCTTGTTC-GGGGAGCTGATGAAGACACATGCCACGGGAATGAGAAAGCTACT----- i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96742014 296 + 98384682 GAACTCTCTCTTTGCACGG-----GTAAATGGGCCG-CCCAAC--AGATCACCTGCACGGAAAGTCCTTTGCTCATTTTGTGGATCTGAGTTGCTGCCAACTTTTCCGTGTGCTCATGTTCTGAAGGAGAAGCAAGATGGCCCTGTTAAAAAGTCCTACTTGGCATTTGTCAAGGACGTTCTGCTCAGGAGAGAGACTGAGGCTTCATGTGCGAAAACCCTGCAGGCTGGGGAAGTGCAGCTCGAGCTGA-CCCCTTGTTC-AGGGAGCTGATGAAGGCACATGATATGGGAATGAGAAAGCTACT----- i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8304002 296 - 10857215 GAACTCTCTCTTTGCACAG-----GTAAACGGGCCG-CCAAAC--AGATCACCTGTGTGGAAAGTCCTTTGCTCATTTTGTGGATCTGAGTTGCTGCCAACTTTTCCGTGTGCTCATGTTCTGAAGGAGAAGCAAGATGGCCCTGTTAAAAAGTCCTACTTGGCATTTGTCAAGGACGTTCTGCTCAGGAGAGAGACTGAGGCTTCATGTGTGAAAACCCTGCAGGCTGGGGAAGTGCAGCTCGAGCTGA-CCCCTTGTTC-GGGGAGCTGATGAAGACACACACCACGGGAATGAGAAAGCTACT----- i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15668110 282 - 23502949 GAACTCTCTCTTTGCATGG-----GTAAATGAGCCG-ACAAAC--AGATCACCTGCGTGGAAAGTCCTTTGCTCACTTTGTGGATCTGAGTTGCTGCCAACTTTTTC-------CATGTTCTGAAGGAGAAGCAAGATGGCCCTGTTAAAAAGTTCTAC-------TTATCAAGGACGTTCTGCTCAGGAGAGAGACTGAGGCTTCGTGTGCGAAAACCCTGCAGGCTGGGGAAGTGCAGCTGGAGCTGA-CCCCTTGTTC-GGGGAGCTGATGAAGGCACATGCCACGGGAATGAGAAAGCTACT----- i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169951332 274 + 171630274 GAACTCTCTCTCTGCACAG-----GTAA---CGCTG-CCAACCTGAGATCACCTGCGAAGAATGTCCTTTGCTCATTTTGTGGATCTGAGTTGCCGCCAACTTTTCCGT-GGTTCATGTTCAGAAGGAGAAGCAAGATGGCCTTGCTGACAAGTCCTACTTGGCATTTGTCAAGGATGTTCTACTCCGCAGAGAGACTGAGGCTTCAGGCATGAAAACCATGCAGGCTGGGGAGGGGCAGCTGGAGCCGA-CCCGTTGTTCAGGGGAGCCGATG--------------GGGAATGAGAC------------ i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1350314 291 - 2905041 GAACTCCCTCTTTGCACAG-----GTGAACGAGCTG-CCAGACTGAGATCCCCTGTGCAGAATGTCCTTTGCTCATTTTGTGGATCTGAG-TGCTGCCAACTCTTCCGTGGGTTCCTGTTCAGAAGAAGAAGCAAGATGGCCTTGCTAACGAGTCCTGCTTGGCATTTGTCAAGGACGTTCTACTCAGGAGAGAGACCGAGGCTTCAGGTGTGAAAACCATGCAGGCTAGGGAGGTGCAGCTGGAGCCGA-CCCCCTGTTCAGGGGAGCCGATGAGGGCACACGCCACGGGAATGAGAC------------ i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1315676 292 - 2164891 GAACTCTCTCTTTGCACAG-----GTAAACAAGCTG-CCAAACTGAGATCACCTGAGCAGAATGTCCTTTGCTCATTTTGTGGATCTGAGTTGCTGCCAACTTTTCCGTGGGTTCATGTTCAGAAGGAGAAGCAAGATGGCCTTGCTAACAAGTCCTACTTGGCATTTGTCAAGGACATTCTACTCAGGATAGAGACCGAGGCTTCAGGTGTGAAAACCATGCAGGCTGCGGAGGTGCAGCTGGAGCTGA-CCCGTTGTTCAGGGGAGCCGATGAGGGCACACGCCACAGGAATGAGAA------------ i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1562000 287 - 1813869 GAACTCTCTCTCTGCACAG-----GTAAACGAG-TG-CCGAACTGAGATCACCTGCGCAGAATGTCCTTTGCTCATTTTGTGGATCTGAGTTGCTGCCAACT-TTCCGTGGGTTCATGTTCAGAAGGAGAAGCAAGATGGCCTTGCTAACGAGTCCTACTTGGCATTTGTTAAGGACGTTCTA-TCAGGAGAGATACTGAGGCTTCGGGTGTGAAAACCATGCAGG-TGGAGAGGGGCAGCTGGAGCCAA-CCCATTGTCC-GGGGAGCCGATGACGGCACACGCCACGGGAATGAGAC------------ i aotNan1.NW_018494782v1 C 0 C 0 s dasNov3.JH569188 648668 273 + 760995 GAACTTACATTTTATTTAGGGAAAGTAAACAACCTGACTGAAC--TACCCGCATGAATGGAAACCCTTCTGTTTATTTTGTGGATCCAAATTGTTGCCAAATTTTCTTGGGGTTCACACT-------------------GCCCTGTCAAAAAAACTTA-TTAGCATTTGTTGAGGATGCTCTGCTCTTGGAACAA---------------GAAGAAAAACTGCAGGTTGAGGAAGTTCATTTTAAGTCAA-TCCGAAGTTCAAGGTAATTGACAGAGGCATATTTCAGATTACTTAGACAGTTATGTTTTT i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e canFam3.chr1 56223505 572 + 122678785 I a score=27757.000000 s hg38.chr6_KB021644v2_alt 163375 3 + 185823 CCT s panPan2.chr6 171853439 3 + 173848474 CCT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11536343 3 - 12463322 CCT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156368730 3 + 157873769 CCT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170397008 3 + 172585720 CCT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169140291 3 - 170955103 CCT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8426645 3 + 10161646 CCT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1457027 3 + 3144229 CCT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96742310 3 + 98384682 CCT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8304298 3 - 10857215 CCT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15668392 3 - 23502949 CCT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169951606 3 + 171630274 CCT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1350605 3 - 2905041 CCT i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1315968 3 - 2164891 GCT i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1562287 3 - 1813869 CCT i aotNan1.NW_018494782v1 C 0 C 0 s dasNov3.JH569188 648941 3 + 760995 TTT i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e canFam3.chr1 56223505 572 + 122678785 I e panTro5.chr6 1780212 0 - 175400573 I a score=348847.000000 s hg38.chr6_KB021644v2_alt 163378 39 + 185823 --TAAGCATCAGTAACAGAAGGTGCCA-TGTGGATAATACAG s panTro5.chr6 173626311 39 + 175400573 --TAAGCATCAGTAACAGAAGGTGTCA-TGTGGATAATACAG i panTro5.chr6 I 10088 C 0 s panPan2.chr6 171853442 39 + 173848474 --TAAGCATCCGTAACAGAAGGTGTCA-TGTGGATAATACAG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11536346 39 - 12463322 --TAAGCATCAGTAACAGAAGGTGTCA-TGTGGATAATACAG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156368733 39 + 157873769 --TAAGCATCAGTAACAGAAGGTGTCA-TGTGGATAATATAG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170397011 39 + 172585720 --TAAGCATCAGTAACAGAGGGTGTCA-TGTGGATAATACAG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169140294 39 - 170955103 --TAAGCATCAGTAACAGAGGGTGTCA-TGTGGATAATACAG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8426648 39 + 10161646 --TAAGCATCAGTAACAGAGGGTGTCA-TGTGGATAATACAG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1457030 39 + 3144229 --TAAGCATCAGTAACAGAGGGTGTCA-TGTGGCTAATACAG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96742313 39 + 98384682 --TAAGCATCAGTAACAGAGGGTGTCA-CGTGGATAACACAG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8304301 39 - 10857215 --TAAGCATCAGTAACAGAGGGTGTCA-TGTGGATAATACAG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15668395 39 - 23502949 --TAAGCATCAGTAACAGAGGGTGTCA-TGTGGAAAATACGG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169951609 39 + 171630274 --TAAGCACCAGCAACGCAGGGTGTCC-TGAGGATAATGTAG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1350608 39 - 2905041 --TAAGCACCAGTAATACAGGGTATCC-TGAGGATAATATAG i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1315971 39 - 2164891 --ACTCCTTAAGTAACACAGGGTGTCC-TAAGGATAAGATAG i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1562290 38 - 1813869 --TAAGCACCAGTAACACAGGGTGTCC-TGAGGATAA-ATAG i aotNan1.NW_018494782v1 C 0 C 0 s dasNov3.JH569188 648944 42 + 760995 TAACAGCATCTGTAATAGAGAAATTTATTTTGGATAACATAG i dasNov3.JH569188 C 0 I 268 e otoGar3.GL873575 10988881 3627 - 12073884 I e canFam3.chr1 56223505 572 + 122678785 I a score=939004.000000 s hg38.chr6_KB021644v2_alt 163417 98 + 185823 GGGCTGAAAAATCATAAGATTAtttgggtgtccccacccaaatctcatctcgaattcccacatgttgtgggaggaatctggtgggaggtgattgaatc s panTro5.chr6 173626350 98 + 175400573 GGGCTGAAAAATCATAAGATTAtttgggtgtccccacccaaatctcatctcgaattcccacatgttgtgggaggaatctggtgggaggtgattgaatc i panTro5.chr6 C 0 C 0 s panPan2.chr6 171853481 98 + 173848474 GGGCTGAAAAATCATAAGATTAtttgggtgtccccacccaaatctcatctcgaattcccacatgttgtgggaagaatctggtgggaggtgattgaatc i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11536385 97 - 12463322 GGACTG-AAAATCATAAGATTAtttgggtgtccccacccaaatctcatcttgaattcccacatgttgtgggaggaatctggtgggaggtgattgaatc i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156368772 98 + 157873769 GGGCTGAAAAATCATAGGATTAtttgggtgtccccacccaaatctcttcttgaattcccacatgttgtgggagggacctggtgggaggtgattgcatc i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170397050 98 + 172585720 GGGCTGAAAAATAATAAGATTAtttgggtgtccccacccaaatctcatcttgaattcccacatgttgtaggagggacctggtgggaggtgattgaatc i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169140333 98 - 170955103 GGGCTGAAAAATAATAAGATTAtttgggtgtccccacccaaatctcatcttgaattcccacatgttgtaggagggacctggtgggaggtgattgaatc i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8426687 98 + 10161646 GGGCTGAAAAATAATAAGATTAtttgggtgtccccacccaaatctcatcttgaattcccacatgttgtaggagggacctggtgggaggtgattgaatc i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1457069 98 + 3144229 GGGCTGAAAAATAATAAGATTAtttgggtgtccccacccaaatctcatcttgaattcccacatgttgtaggagggacctggtgggaggtgattgaatc i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96742352 98 + 98384682 GGGCTGAAAAATAATAAGATTATTTAGgtgtccccacccagatctcatgttgaattcccacatgttgtaggagggaccaggtgggaggtgattgaatc i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8304340 98 - 10857215 GGGCTAAAAAATAATAAGATTAtttgggtgtccccacccaaatctcatcttgaattcccacatgttgtaggagggacctggtgggaggtgattgaatc i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15668434 98 - 23502949 GGGCTGAAAAATAATAAGATTAtttgggtgtccccacccgaatctcatcttgaattcccacacgttgtaggagggacctggtgggaggtgatggaatc i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169951648 96 + 171630274 AGGCAGAAAAATAATAAGattgttggggtgtccccacccaaatctcatcctgaa-tctcacatgttgt-gaagggacctggtgggaggtgattgaatc i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1350647 96 - 2905041 AGGCAGAAAAATAATAAGATTATTGGGgtgtccccacccaaatctcatcttgaa-tctcacatgttgt-gaagggacctggtgggaggcaattgaatt i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1316010 96 - 2164891 GGGCAGAAAAATAAtaatattattggggtgtccccacccaaatctcatcttgaa-tctcatatgttgt-gaagggacctggtgggaggtgattgaatc i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1562328 96 - 1813869 AGGCAGAAAAATAATAAGATTATTGGGCtgtccccacccaaatctcatcttgaa-tctcacatgttgt-gaagggacctggtgggaggtgattgaatc i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e dasNov3.JH569188 648986 268 + 760995 I e canFam3.chr1 56223505 572 + 122678785 I a score=2181156.000000 s hg38.chr6_KB021644v2_alt 163515 253 + 185823 atgggggcaggtctctcctgggctgttctta--tgat-------------------cgtgagtggg-----tctcatgagatctgatggttttaaa--aacaggagtttccctgcacaagctctcttctcttgtctgccaccatgtgag-acatgcctttcacattccgccatgattttgaggcctcccc----agccacacagaactgg---gtccattgaacctc--tctttt-----gtaaattgccca----gtctcaggt----------------------------------------------------------atgtc------------tttatcagcagcatgaaaacac------------------actaatac------- s panTro5.chr6 173626448 253 + 175400573 atgggggcaggtctctcctgggctgttctca--tgat-------------------tgtgagtggg-----tctcatgagatctgatggttttaaa--aacaggagtttccctgcacaagctctcttctcttgtctgccaccatgtgag-acatgcctttcacattccgccatgattgtgaggcctcccc----agccacacagaactgg---ttccattgaacctc--tctttt-----gtaaattgccca----gtctcaggt----------------------------------------------------------atgtc------------tttatcagcagcatgaaaacac------------------actaatac------- i panTro5.chr6 C 0 C 0 s panPan2.chr6 171853579 253 + 173848474 atgggggcaggtctctcctgggctgttctca--tgat-------------------tgtgagtggg-----tctcatgagatctgatggttttaaa--aacaggagtttccctgcacaagctctcttctcttgtctgccaccatgtgag-acatgcctttcacattccgccatgattgtgaggcctcccc----agccacacagaactgg---gtccattgaacctc--tctttt-----gtaaattgccca----ctctcaggt----------------------------------------------------------atgtc------------tttatcagcagcatgaaaacac------------------actaatac------- i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11536482 253 - 12463322 atgggggcaggtctctcctgggttgttctca--tgat-------------------cgtgagtggg-----tctcatgagatctgatggttttaaa--aacaggagtttccctgcaaaagctctcttctcttgtctgccaccatgtgag-acatgcctttcacattccgccatgattgtgaggcctcccc----agccacacagaactgg---gtccattgaacctc--tctttt-----gtaaattgccca----gtctcaggt----------------------------------------------------------atgtc------------ttgatcagcagcgtgaaaacac------------------actaatac------- i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156368870 253 + 157873769 atgggggcaggtctctcctgggctgttctca--cgat-------------------catgagtggg-----tctcacgagatctgatggttttaaa--aacaggagtttccctgcacaaactctcttctcttgtctgccaccatgtgag-acgtgcctttcacattctgccatgattgtgaggcctcccc----agccacgcagaactgg---gtccattaaacctc--tctttt-----gtaaattgccca----gtctcaggt----------------------------------------------------------atgtc------------tttatcagcagcatgcaaacac------------------actaatac------- i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170397148 253 + 172585720 atgggggcaggtctttcctgtgctgttctca--tgac-------------------catgagtggg-----tctcacgagatctgacggttttaaa--aacaggggtttccctgcacaagctctcttctcttgtctgccaccatgtgag-acatgcctttcacattctgccatgattgtgaggcctctcc----agccacacagaactgt---gtccattaaacctc--tctttt-----gttaattgccca----gtctcaggt----------------------------------------------------------atgtc------------tttatcagcagcatgaaaacac------------------actaatac------- i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169140431 253 - 170955103 atgggggcaggtctttcctgtgctgttctca--tgac-------------------catgagtggg-----tctcacgagatctgacggttttaaa--aacaggggtttccctgcacaagctctcttctcttgtctgccaccatgtgag-acatgcctttcacattctgccatgattgtgaggcctctcc----agccacacagaactgt---gtccattaaacctc--tctttt-----gttaattgccca----gtctcaggt----------------------------------------------------------atgtc------------tttatcagcagcatgaaaacac------------------actaatac------- i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8426785 253 + 10161646 atgggggcaggtctttcctgtgctgttctca--tgac-------------------catgagtggg-----tctcacgagatctgacggttttaaa--aacaagggtttccctgcacaagctctcttctcttgtctgccaccatgtgag-acatgcctttcacattctgccatgattgtgaggcctcccc----agccacacagaactgt---gtccattaaacctc--tctttt-----gttaattgccca----gtctcaggt----------------------------------------------------------atgtc------------tttatcagcagcatgaaaacac------------------actaatac------- i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1457167 274 + 3144229 atgggggcaggtctttcctgtgctgttctca--ggaccatgagtgggtctcacgatcatgagtggg-----tctcacgagatctgacggttttaaa--aacaggggtttccctgcacaagctctcttctcttgtctgccaccatgtgag-acatgcctttcacattctgccatgattgtgaggcctcgcc----aaccacacagaactgg---gtccattaaacctctttctttt-----gtaaattgccca----gtctcaggt----------------------------------------------------------atgtc------------tttatcagcagcatgaaaacac------------------actaatac------- i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96742450 271 + 98384682 atgggggcaggtctttcctgtgctgttctca--tgaccatgagtgggtctcatgatcatgagtggg-----tctcacgagatctgacggttttaaa--aacaggggtttccctgcacaagctctcttctcttgtctgccaccatgtgag-acatacctttcacattctgccatgattgtgaggcctctcc----agccacacagaactgt---gtccattaaacatc--tctttt-----gtaaattgccca----gtctcaggt----------------------------------------------------------atgtc------------tttatcagca-catgaaaacac------------------actaatac------- i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8304438 272 - 10857215 atgggggcaggtctttcctgtgctgttctca--ggaccatgagtgggtctcacgatcatgagtggg-----tctcacgagatctgacggttttaaa--aacaggggtttccctgcacaagctctcttctcttgtctgccaccatgtgag-acatgcctttcacattctgccacgattgtgaggcccctcc----agccacacagaactgg---gtccattaaacctc--tctttt-----gtaaattgccca----gtctcaggt----------------------------------------------------------atgtc------------tttattagcagcatgaaaacac------------------actaatac------- i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15668532 251 - 23502949 atgggggcaggcctttcctgtgctgttctca--tgat-------------------catgagcggg-----tctcacgagatctgatggttttaaa--aacaggggtttccctgcacaagttctcttctcttgtcggccaccatgtgag-acgtgcctttcacactctgccatgattgtgaggcctctcc----agccatgcagaactgg---gtccattaaacctc--tctttt-----gtaaattgccca----gtctcaggt----------------------------------------------------------atgtc------------tttatcagcagcatgaaa--ac------------------gctaatac------- i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169951744 256 + 171630274 atgtgggcaagtctttcccatgctgttctca--tgat-------------------agtgagtggg-----tctcacaagatctgatgcttttaaa--aacggggctttccctgcacaagctctcttctcttgtctgccaccatgtgag-atgtgccttccgccttccaccacgattgtgaggcctcccc----agccacgtggaactgtg-agtccattaaacctctttcttct-----gtaaattgccca-----tcttggat----------------------------------------------------------atctg------------tttctcagcagtgtgaaaacgc------------------aggaatac------- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1350743 239 - 2905041 atgtgggcaagtctttcctatgctgttctca--tgat-------------------agtgagtggg---------------------gcttttaaa--aacagggccttccctgcacaagctctcttctcttgtctgccaccatgcgag-atgtgccttctgccttccaccatgattgtgaggccttccc----agccacgtggaactgtg-agtccattaaacctctttgtttt-----gtaaattgccca-----tctcggat----------------------------------------------------------atgtg------------tttatcagcagtgtgaaaacaT-------------------GGAATAC------- i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1316106 239 - 2164891 acgtgggcaagtgtttcccatgctgttctca--tgag-------------------agtgagtggg---------------------gcttttaaa--aacagggctttccctgcacaagctctcttctcttgcctgccaccatgtgag-atgtgccttccgccttccaccatgattgtgaggcttccct----agccatgt-gaactgtg-agtccattaaacatctttctttt-----gtaaattgccca-----tctcagat----------------------------------------------------------atgtg------------tttatcagcagtgtgaaaacac------------------aggactaC------- i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1562424 255 - 1813869 atgtggacaagtctttcccatgctgttctcg--tgat-------------------agtgagtggg-----tctcacaagatctgatgcttttaaa--aat-ggactttccctgcacaagctctcttctcttgtctgccaccgtgtgag-acgtgccttctgccttccaccatgatcgtgagacctcccc----agccacgtggaactgtg-agtccattaaacctctttctttt-----gtaaattgccca-----tctcggat----------------------------------------------------------atgtg------------tttctcagcagtgtgaaaatgc------------------aggaatac------- i aotNan1.NW_018494782v1 C 0 C 0 s dasNov3.JH569188 649254 375 + 760995 --ttgagctcgtttctctcctagtgttctcagctgctcaactgcaaactttga---ggcaagtggctcatctctcccaggagctccaggatcaaaactaacagtgttctctc---------tctcttcttcttcttga------gtgagtgtctgtttatatcagcccaccaagggggcggggactcaacacagagtcacgccctgctgagtggtccaatcaaagtcctaatcttaacaggtaatttaatcaagacatctcaggtggatctagcacaatcaaaggagatcacacccagagtaaccaaccagtttacaaacataatgtctcttttttgggattcataaataatctcaaaatgccacaCATAGGGACTGCAAAATAATAATTACTTA i dasNov3.JH569188 I 268 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e canFam3.chr1 56223505 572 + 122678785 I a score=9383319.000000 s hg38.chr6_KB021644v2_alt 163768 940 + 185823 aGGTAGGTTCAGACAAAGAGTCATTGGCTCCACATGGTGGCAGC-TCCTATGCCTCCT-GCCTGAGCTGAGGGTCTGTGGCTGCAGG------CCCAGCTCA--GGAAA---------------GGAGCTGCTGGAAAC------------------------TGGAATGATATGAAATAGACCCATCT--ACAGTTTTTCTGGTCATCTGTTAAAAAAGAATTTAATGCTTACAAGATAACTATCATTGGTAGTAATA-GTCTA-GGCCCATGACATTCTTTAATA-----TTTGGGAGTATCAGAACTTTAAAGATTAGACTTAGTTATAAATA----GAATATTTATTTAGGAACTTAGAGACATCTGGGCATTTCATGTCATGAAAGTAACAAAACCCT----CCCTCTTTGCACGGCTCCAGTACAAATCATGA----CTGCTG--TTGGAGAGGCTCTGATA-CGCTGTGCGTGCAGATGGTGCCCGAGAGCCGGGGAACAGCAGCATC----------TCACCCGGGCTTTCTCCTTT-------------------------CCATCTGGCAGGTGCCAGC-------------------------TTCTAACCACCATCAGCTGCCATGTCCACTGCCATCTGTTTAGCTAATGGACAGGGAGCACCTACTGTGGGCCAAGCCCC-CGACAGGCACCAGAGAT---------------TGG---------------GTGGAGAT-AGACAAAACCAAG-CACAGACA--AATTCAATTAGT-TGTTTTCTGGAGGAAAGAAACAAGAA-CCATGCATGAGAACATCTTGTTCTTGACATCTTCA--ACCAGAC-------ACTGAGGTCGGCTCTCGTCAGCAGCTGGGTCTCCTTGAGGTTCACTGGATGGGGAGGTTGTCTGCATTTCACGTTTTAATTAATTTTTAAAAGTTACTTAGATGAATTATTTCATTGGCTACGTATCATCCTGTGCCAAAAAACAAACTGTG---AAGCCCAGCAGCATA-TATATTTTA-AAA--------TGCAGTTac-aaaaaagcataaatatgaaaacaaaaacaa-acaactaaCCATTATTGATTGTGTCATACTAA s panTro5.chr6 173626701 936 + 175400573 aGGTAGGTTCAGACAAAGAGTCATTGGCTCCACCTGGCAGCAGC-TCCTACGCCTCCT-GCCTGAGCTGAGGGTCTGTGGCTGCAGG------CCCAGCTCA--GGAAA---------------GGAGCTGCTGGAAAC------------------------TGGAATAATATGAAATAGACCCATCT--ACAGCTTTTCTGGTCATCTGTTAAAAAAGAATTTAATGCTTACAAGATAACTATCATTGGTAGTAATA-GTCTA-GGCCCATGACATTCTTTAATA-----TTTGGGAGTATCAGAAATTTAAAGATTAGACTTAGTTATAAATA----GAATATTTA----GGAACTTAGAGACATCTGGGCATTTCATGTCACGAAAGTAACAAAACCCT----CCCTCTTTGCACGGCTCCAGTACAAATCATGA----CTGCTG--TTGGAGAGGCTCTGATA-CACTGTGCGTGCAGATGGTGCCCGAGAGCAGGGGAACAGCGGCATC----------TCACCCGGGCTTTCTCCTTT-------------------------CCATCTGGCAGGTGCCAGC-------------------------TTCTAACCACCATCAGCTGCCATGTCCACTGTCATCTGTTTAGCTAATGCACAGGGAGCACCTACTGTGGGCCAAGCCCC-CAACAGGCACCAGAGAT---------------TGG---------------GTGGAGAC-AGACAAAACCAAG-CACAGACA--AATTCAATTAGT-TGTTTTATGGAGGAAAGAAACAAGAA-CCATGCATGAGAACATCTTGTTCTTGACATCTTCA--ACCAGAC-------ACTGAGGTCGGCTCTCATCAGCAGCTGGGTCTCCTTGAGGTTGACTGGATGGGGAGGTTGTCTGCATTTCACGTTTTAATTAATTTTTAAAAGTGACTTAGATGAATTATTTCATTGGCTACTTCTCATCCTGTGCCAATAAACAAACTGTG---AAGCCCAGCAGCATA-TATATTTTA-AAA--------TGCAGTTac-aaaaaagcataaatatgaaaacaaaaacaa-acaactaaCCATTATTGATTGTGTCATACTAA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171853832 940 + 173848474 aGGTAGGTTCAGACAAAGAGTCATTGGCTTCACCTGGCAGCAGC-TCCTACGCCTCCT-GCCTGAGCTGAGGGTCTGTGGCTGCAGG------CCCAGCTCA--GGAAA---------------GGAGCTGCTGGAAAC------------------------TGGAATAATATGAAATAGACCCATCT--ACAGTTTTTCTGGTCATCTGTTAAAAAAGAATTTAATGCTTACAAGATAACTATCATTGGTAGTAATA-GTCTA-GGCCCATGACATTCTTTAATA-----TTTGGGAGTATCAGAAATTTAAAGATTAGACTTAGTTATAAATA----GAATATTTATTTAGGAACTTAGAGACATCTGGGCATTTCATGTCACAAAAGTAACAAAACCCT----CCCTCTTTGCACGGCTCCAGTACAAATCATGA----CTGCTG--TTGGAGAGGCTCTGATA-CGCTGTGCGTGCAGATGGTGCCCGAGAGCCAGGGAACGGCGGCATC----------TCACCCGGGCTTTCTCCTTT-------------------------CCATCTGGCAGGTGCCAGC-------------------------TTCTAACCACCATCAGCTGCCATGTCCACTGTCATCTGTTTAGCTAATGCACAGGGAGCACCTACTGTGGGCCAAGCCCC-CAACAAGCACCAGAGAT---------------TGG---------------GTGGAGAC-AGACAAAACCAAG-CACAGACA--AATTCAATTAGT-TGTTTTATGGAGGAAAGAAACAAGAA-CCATGCATGAGAACATCTTGTTCTTGACATCTTCA--ACCAGAC-------ACTGAGGTCGGCTCTCGTCAGCAGCTGGGTCTCCTTGAGGTTGACTGGATGGGGAGGTTGTCTGCATTTCACGTTTTAATTAATTTTTAAAAGTGACTTAGATGAATTATTTCATTGGCTACTTCTCATCCTGTGCCAATAAACAAATTGTG---AAGCCCAGCAGCGTA-TATATTTTA-AAA--------TGCAGTTac-aaaaaagcataaatatgaaaacaaaaacaa-acaactaaCCATTATTGATTGTGTCATACTAA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11536735 940 - 12463322 aGGTAGGTTCAGACAAAGAGTCATTGGCTCCACATGGCGGCAGC-TCCTACGCCTCCT-GCCTGAGCTGAGGGTCTGTGGCTGCAAG------CCCAGCTCA--GGAAA---------------GGAGCTGCTGGAAAC------------------------TGGAATGATATGAAATAGACCCATCT--ACAGTTTTTCTGGTCATCTGTTAAAAAAGAATTTAATGCTTACAAGATAACTATCATTGGTAGTAATA-GTCTA-GGCCCATGACATTCTTTAATA-----TTTGGGAGTATCAGAAATTTAAAGATTAGACTTAGTTATAAATA----GAATATTTATTTAGGAACTTAGAGACATCTGGGCATTTCATGTCATGAAAGTAACAAAACCCT----CCCTCTTTGCACGGCTCCAGTACAAATCATGA----CTGCTG--TTGGAGAGGCTCTGATA-CGCTGTGCGTGCAGATGGTGCCTGAGAGCTGGGGAACGGCGGCATC----------TCACCCGGGCTTTCTCCTTT-------------------------CCATCTGGCAGGTGCCAGC-------------------------TTCTAACCACCATCAGCTGCCATGTCCACTGTCATCTGTTTAGCTAATGGACAGGGAGCACCTACTGTGGGCCAAGCCCC-CGACAGGCACCAGAGAT---------------TGG---------------GTGGAGAC-AGACAAAACCAAG-CACAGACA--AATTCAATTAGT-TGTTTTATGGAGGAAAGAAACAAGAA-CCATGCATGAGAACATCTTGTTCTTGACATCTTCA--ACCAGAC-------ACTGAGGTCGGCTCTCGTCAGCAGCTGGGTCTCCTTGAGGTTGACTGGATGGGGAGGTTGTCTGCATTTCACGTTTTAATTAATTTTTAAAAGTGACTTAGATGAATTATTTCATTGGCTACTTCTCATCCTGTGCCAATAAACAAACTGTG---AAGCCCAGCAGCATA-TATATTTTA-AAA--------TGCAGTTac-aaaaaagcataaataagaaaacaaaaacaa-acaactaacCATTATTGATTGTGTCATACTAA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156369123 940 + 157873769 aGGTAGGTTCAGGCAAAGAGTCATTGGCTCCACATGGCGGCAGC-TCCTGTGCCACCT-GCCTGAGCTGAGGGTCTGTGGCTGCAGG------CCCAGCTCA--GGGAA---------------GGAGCTGCTGGACAC------------------------TGGAATGATATGAAATAGTCCCATCT--ACAGTTTTTCTGGTCATCTGTTAAAAAAGACTTTAATGCTTACAAGATAACTATTATTGGTAGT-ATA-GTCTA-GGCCCATGACATTCTTTAATA-----TTTGGGAATATCAGAAATTTAAAGATTAGACTTAGTTATAAATA----GAATATTTATTTAGGAACTTAGAGACATCTGGGCATTTCATGGCATGAAAGTAACAAAACCCT----CCCTCTGTGCACTGCTCCAATACGAATCATGA----CTGCTG--TTGGAGAGGCTCTGATA-CGCTGTGCGTGCAGATGGTGCCTGAGAGCCGGGGAACGGCAGCATC----------TCACCCAGGCTTTCTCCTTT-------------------------CCATCTGGCAGGTGCCAGC-------------------------TTCTAAGCACCATCGGCTGCCATGTCCACTGTCATCTGTTTAGCTAATGGACAGGGAACACCTACTATGGACCAAGCCCC-CGACAGGCACCAGAGAC---------------TGG---------------GTGGAGAC-AGACAAAACCAAG-CACAGACA--AATTCAATTAGT-TGTTTTATGGAGGAAAGAAACAAGGA-CCATGCATGAGAACAGCTTGTTCTTGACGTCTTCA--ACCAGAC-------ACTGAGGTCAGCTCTCGTCAGCAGCTGGGTCTCCTCGAGGTTGGCTGGATGGGGAGGTTGTCTGCATTTCATGTTTTAATTAATTTTTAAAAGTTACTTAGATGAATTATTTAATTGGCTATTTCTCATCCTGTGCAAATAGACAAATTGTG---AAGTCCAGCAGCGTA-TATATTTTA-AAA--------TGCAGTTAT-AAAAAAGCATAAATTTGAAAACAAAAACAATACAACGAACCATTATTGATTGTGTCATACTAA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170397401 968 + 172585720 aGGTGGGTTTAGACAAAGAACTGTTGGCTCCACATGGTGGCAGC-TCCTGTGCCTCCC-GCCTGAGCTGAGGGTCTGTGGCTGCAGG------CCCAGCTCA--GGAAA---------------GGAGCTGCTGGAAAC----------------------TGTGGAATGAAATGAAATAGTCCCATCT--ACAGTTTTTCTGGTCATCTGTTGAAAAAGACTTCAATGCTTACAAAATAACTGTTATTGGTGGTAATA-GTCCA-GGCCCACGACATTCTTTAATA-----TTCGGGAGTATCAGAAATTTAAAGATTAGACTTAGTTATCAATA----GAATATTTATTTAGGAACTTAGAGACATCTGGGCATTTCATGTAATGAAAGTAGCAAAATCCT----CCCTCTTTGCACGGCTCTAGTACGAATCATGA----CTGCTA--TTGGAGGGGCTCTCATA-CTCTGTGCGTGCAGATGGTGCCTGAGAGCCGGGGGACGATGGTGTC----------TGGCCTTGTCCTTCTCCTTT-------------------------CCATCTGGCAGGTGCCAGCTTCTAACCATCTGGCAGGTGCCAGCTTCTAACCAGCATCGGCTGCCATGTCCACTGTCATCTGTTTAGCTAATGGACAGGGAGCACCTACTGTGGGCCAAGCCTC-CAACAGGCACCAGAGAT---------------TGG---------------GTGGAGAC-AGACAAAACCAAG-CCCAGACA--AATTCAATTAGT-TGTTTTATGGAGGAAAGAAACAAGGA-CCATGCATGAGAACAGCTTGTTCTTGACGTCTTCA--ACCAGAC-------ACTGAGGTCAGCTCTCGTCAGCAGCTGGGTCTCCTTGAGGTTGGCTGGATGGGGAGGTTGTCTGCATTTCACGTTTTAATTAATTTGTAAAAGTTACTTAGATGAACTATTTCATTGGCTATTTCTCATCCTGTGCCAGTAGAGAAATTGTG---AATCCCAACAGCATA-TATATTTTA-AAA--------TGCAGTTAT-AAAAAAGCATAAATACAAAAACAAAAGCAAAACATCTAACCATTATTGATTGTGTCATACTAA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169140684 968 - 170955103 aGGTGGGTTCAGACAAAGAACTGTTGGCTCCACATGGTGGCAGC-TCCTGTGCCTCCC-GCCTGAGCTGAGGGTCTGTGGCTGCAGG------CCCAGCTCA--GGAAA---------------GGAGCTGCTGGAAAC----------------------TGTGGAATGAAATGAAATAGTCCCATCT--ACAGTTTTTCTGGTCATCTGTTGAAAAAGACTTCAATGCTTACAAAATAACTGTTATTGGTGGTAATA-GTCCA-GGCCCATGACATTCTTTAATA-----TTCGGGAGTATCAGAAATTTAAAGATTAGACTTAGTTATCAATA----GAATATTTATTTAGGAACTTAGAGACATCTGGGCATTTCATGTAATGAAAGTAGCAAAATCCT----CCCTCTTTGCACGGCTCTAGTACGAATCATGA----CTGCTA--TTGGAGGGGCTCTCATA-CTCTGTGCGTGCAGATGGTGCCTGAGAGCCGGGGGACGATGGTGTC----------TGGCCTTGTCCTTCTCCTTT-------------------------CCATCTGGCAGGTGCCAGCTTCTAACCATCTGGCAGGTGCCAGCTTCTAACCAGCATCAGCTGCCATGTCCACTGTCATCTGTTTAGCTAATGGACAGGGAGCACCTACTGTGGGCCAAGCCTC-CAACAGGCACCAGAGAT---------------TGG---------------GTGGAGAC-AGACAAAACCAAG-CCCAGACA--AATTCAATTAGT-TGTTTTATGGAGGAAAGAAACAAGGA-CCATGCATGAGAACAGCTTGTTCTTGACGTCTTCA--ACCAGAC-------ACTGAGGTCAGCTCTCGTCAGCAGCTGGGTCTCCTTGAGGTTGGCTGGATGGGGAGGTTGTCTGCATTTCACGTTTTAATTAATTTGTAAAAGTTACTTAGATGAACTATTTCATTGGCTATTTCTCATCCTGTGCCAGTAGAGAAATTGTG---AATCCCAACAGCATA-TATATTTTA-AAA--------TGCAGTTAT-AAAAAAGCATAAATACGAAAACAAAAGCAAAACAACTAACCATTATTGATTGTGTCATACTAA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8427038 993 + 10161646 aGGTGGGTTCAGACAAAGAACTGTTGGCTCCACATGGTGGCAGC-TCCTGTGCCTCCC-GCCTGAGCTGAGGGTCTGTGGCTGCAGG------CCCAGCTCA--GGAAA---------------GGAGCTGCTGGAAAC----------------------TGTGGAATGAAATGAAATAGTCCCATCT--ACAGTTTTTCTGGTCATCTGTTGAAAAAGACTTCAATGCTTACAAAATAACTGTTATTGGTGGTAATA-GTCCA-GGCCCATGACATTCTTTAATA-----TTCGGGAGTATCAGAAATTTAAAGATTAGACTTAGTTATCAATA----GAATATTTATTTAGGAACTTAGAGACATCTGGGCATTTCATGTAATGAAAGTAGCAAAATCCT----CCCTCTTTGCACGGCTCTAGTACGAATCATGA----CTGCTA--TTGGAGGGGCTCTCATA-CTCTGTGCGTGCAGATGGTGCCTGAGAGCCGGGGGACGATGGTGTC----------TGGCCTTGTCCTTCTCCTTTCCATCTGGCAGGTGCCAGCTTCTAACCATCTGGCAGGTGCCAGCTTCTAACCATCTGGCAGGTGCCAGCTTCTAACCAGCATCGGCTGCCATGTCCACTGTCATCTGTTTAGCTAATGGACAGGGAGCACCTACTGTGGGCCAAGCCTC-CAACAGGCACCAGAGAT---------------TGG---------------GTGGAGAC-AGACAAAACCAAG-CCCAGACA--AATTCAATTAGT-TGTTTTATGGAGGAAAGAAACAAGGA-CCATGCATGAGAACAGCTTGTTCTTGACGTCTTCA--ACCAGAC-------ACTGAGGTCAGCTCTCGTCAGCAGCTGGGTCTCCTTGAGGTTGGCTGGATGGGGAGGTTGTCTGCATTTCACGTTTTAATTAATTTGTAAAAGTTACTTAGATGAACTATTTCATTGGCTATTTCTCATCCTGTGCCAGTAGAGAAATTGTG---AATCCCAACAGCATA-TATATTTTA-AAA--------TGCAGTTAT-AAAAAAGCATAAATACGAAAACAAAAGCAAAACAACTAACCATTATTGATTGTGTCATACTAA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1457441 968 + 3144229 aGGTGGGTTCAGACAAAGAACTGTTGGCTCCACATGGTGGCAGC-TCCTGTGCCTCCC-GCCTGAGCTGAGGGTCTGTGGCTGCAGG------CCCAGCTCA--GGAAA---------------GGAGCTGCTGGAAAC----------------------TGTGGAATGAAATGAAATAGTCCCATCT--ACAGTTTTTCTGGTCATCTGTTGAAAAAGACTTCAATGCTTACAAAATAACTGTTATTGGTAGTAATA-GTCCA-GGCCCATGACATTCTTTAATA-----TTCGGGAGTATCAGAAATTTAAAGATTAGACTTAGTTATCAATA----GAATATTTATTTAGGAACTTAGAGACATCTGGGCATTTCATGTAATGAAAGTTGCAAAACCCT----CCCTCTTTGCACGGCTCTAGTACGAATCATGA----CTGCTA--TTGGAGAGGCTGTCATA-CTCTGTGCGTGCAGATGGTGCCTGAGAGCCGGGGGACGATGGTGTC----------TTGCCTTGTCCTTCTCCTTT-------------------------CCATCTGGCAGGTGCCAGCTTCTAACCATCTGGCAGGTGCCAGCTTCTAACCAGCATCGGCTGCCATGTCCACTGTCATCTGTTTAGCTAATGGACAGGGAGCACCTACTGTGGGCCAAGCCCC-CAACAGGCACCAGAGAT---------------TGG---------------GTGGAGAC-AGACAAAACCAAG-CCCAGACA--AATTCAATTAGT-TGTTTTATGGAGGAAAGAAACAAGGA-CCATGCATGAGAACAGCTTGTTCTTGACGTCTTCA--ACCAGAC-------ACTGAGGTCAGCTCTCGTCAGCAGCTGGGTCTCCTTGAGGTTGACTGGATGGGAAGGTTGTCTGCATTTCACGTTTTAATTAATTTTTAAAAGTTACTTAGATGCATTATTTCATTTACTATTTCTCATCCTGTGCCAGTAGAGAAATTGTG---AAGCCCAACAGCATA-TATATTTTA-AAA--------TGCAGTTAT-AAAAAAGCATAAATACGAAAACAAAAGCAAAACAACTAACCATTATTGATTGTGTCATACTAA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96742721 942 + 98384682 aGGTGGGTTCAGACAAAGAACTGTTGGCTCCACATGGTGGAAGC-TCCTATGCCTCCC-CCCTGAGCTGAGGGTCTGTGGCTACAGG------CCCAGCTCA--GGAAA---------------GGAGCTGCTGGAAAC----------------------TGTGGAATGAAATGAAATAGTCCCATCT--ACAGTTTTTCTGGTCATCTGTTGAAAAAGACTTCAGTGCTTACAAAATAACTGTTATTGGTGGTAATA-GTCCG-GGCCCATGACATTCTTTAATA-----TTCAGGAGTATCAGAAATTTAAAGATTAGACTTAGTTATCAATA----GAATATTTATTTAGGAACTTAGAGACATCTGGGCATTTCATGTAATGAAAGTAGCAAAATCCT----CCCTCTCTGCACGGCTCTAGTACGAATCATGA----CTGCGG--CTGGAGAGGCTCTCATG-CTCTGTGCGTGCAGATGGTGCCTGAGAGTCAGGGGATGACGGTGTC----------TTGCCTTGTCTTTCTCCTTT-------------------------CCATCTGGCAGGTGCCAAC-------------------------TTCTAACCAGCATC-GCTGCCATGTCCACTGTCATCTGTTTAGCTAATGGACAGGGAGCACCTACTGTGGGCCAAGCCCC-CAACAGGCACCAGAGAT---------------TGG---------------GTGGAGAC-AGACAAAACCAAG-CCCAGACA--AATTCAATTACT-TGTTTTATGGAGGAAAGAAACAAGGA-CCATGCATGAGAACAGCTTGTTCTTGACGTCTTCA--ACCAGAC-------ACTGAGGTCAGCTCTCGTCAGCAGCTGGGTCTCCTTGAGGTTGACTGGATGGGAAGGTTGTCTGCATTTCACATTTTAATTAATTTTTAAAAGTTACTTAGATGCATTATTTCATTTGCTATTTCTCATCCTGTGCCAGTAGAGAAATTGTG---AAGCCCAACAGCATA-TATATTTTA-AAA--------TGCAGTTAT-AAAAAAGCATAAATAGGAAAACAAAAGCAAAACAACTAACCATGATTGATTGTGTCATACTAA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8304710 967 - 10857215 aGGTGGGTTCAGACAAAGAACTGTTGGCTCCACATGGTGGCAGC-TCCTGTGCCTCCT-GCCTGAGCTGAGGGTCTGTGGCTGCAGG------CCCAGCTCA--GGAAA---------------GGAGCTGCTGGAAAC----------------------TGTGGAATGAAATGAAATAGTCCCATCT--ACAGTTTTTCTGGTCATCTGTTGAAAAAGACTTCAATGCTTACAAAATAACTGTTATTGGTAGTAATA-GTCCA-GGCCCATGACATTCTTTAATA-----TTCGGGAGTATCAGAAATTTAAAGATTAGACTTAGTTATCAATA----GAATATTTATTTAGGAACTTAGAGACATCTGGGCATTTCTTGTAATGAAAGTAGCAAAGCCCT----CCCTCTTTGCACGGCTCTA-TACGAATCATGA----CTGCTA--TTGGAGAGGCTGTCACA-CTCTGTGCGTGCAGATGGTGCCTGAGAGCCGGGGGACAATGGTGTC----------TTGCCTGGGCTTTCTCCTTT-------------------------CCATCTGGCAGGTGCCAGCTTCTAACCATCTGGCAGGTGCCAGTTTCTAACCAGCATCGGCTGCCATGTCCACTGTCATCTGTTTAGCTAATGGACAGGGAGCACCTACTGTGGGCCAAGCCTC-CAACAGGCACCAGAGAT---------------TGG---------------GTGGAGAC-AGACAAAACCAAG-CCCAGACA--AATTCAATTAGT-TGTTTTATGGAGGAAAGAAACAAGGA-CCATGCATGAGAACAGCTTGTTCTTGACGTCTTCA--ACCAGAC-------ACTGAGGTCAGCTCTCGTCAGCAGCTGGGTCTCCTTGAGGTTGACTGGATGGGGAGGTTGTCTGCATTTCACGTTTTAATTAATTTGTAAAAGTTACTTAGATGAATTATTTCATTGACTATTTCTCATCCTGTGCCAGTAGAGAAATTGTG---AAGCCCAACAGCATA-TATATTTTA-AAA--------TGCAGTTAT-AAAAAAGCATAAATACGAAAACAAAAGCAAAACAACTAACCATTATTGATTGTGTCATACTAA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15668783 969 - 23502949 aGGTGGGTTCAGACAAAGAACTGTTGGCTTCCCATGGTGGCAGC-TCCTATGCCTCCC-GCCTGAGCTGAGGGTCTGTGGCTGCAGG------CCCAGCTCC--GGGAA---------------GGAGCTGCTGGAAAC----------------------TGTGGAATGAAATGAAATAGTCCCATCTACACAGTTTTTCTGGTCATCTGTTGAAAAAGACTTCAATGCTTACAAAATAACTGTTATTGGTAGTAATA-GTCCA-GGCCCATGACATTCTTTAATA-----TTCAGGAGTATCAGAAATTTGAAGATTAGACTTAGTTATAAATA----GAATATTTATTTAGGAACTTAGAGATATCTGGGCATTTCATGTAATGAAAGTAGCAAAACCCT----CCCTCTTTGCACGGCTCTAGTATGAATCATGA----CTGCTA--TTGGAGAGGCTGTCATA-CACTATGCGTGCAGATGGTGCCTGAGAGCCGCAGGACGATGGTGTC----------TTGCCTGGGCTTTCTCCTTT-------------------------CCATCTGGCAGGTGCCAGCTTCTAACCATCTGGCAGGTGCCAGCTTCTAACCAGCATCGGCTGCCATGTCCACTGTCATCTGTTTACCTAATGGACAGGGAACACCTACTGTGGGCCAAGCCCC-CAACAGGCACCAGAGAT---------------TGG---------------GTGGAGAC-AGACAAAACCAAG-CCCAGACA--AATTCAATTAGT-TGTTTTATGGAGGAAAGAAACAAGGA-CCATGCATGAGAACAGCTTGTTCTTGACGTCTTCA--ACCAGAC-------ACTGAGGTCAGCTCTCGTCAGCAGCT-GGTCTCCTTGAGGTTGACTGGATGGGAAGGTTGTCTACATTTCACGTTTTAATTAATTTGTAAAAGTTACTTAGATGAATTATTTCGTTGACTATTTCTCATCCTGTGCCAGTAGAGAAATTGTG---AAGCCCAACAGCATA-TATATTTTA-AAA--------CGCAGTTAT-AAAAAAGCATAAATACGAAAACAAAAGCAAAACAACTAACCATTATTGATTGTGTCATACTAA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169952000 934 + 171630274 aGGTAGGTTCTGACAAAGAGCTGTTAGCTCCACATGGTGGCAGC-TCCTGGGCCTCCA-GCCTGAACTGAGGGTCTGTGGCTGCAGG------CCCAGCTCA--GGGCA---------------GGAGCTACTAGAAAC----------------------TGGGGAATGACAGGAAATAGTCCCTTGT--GCAGTTTTTCTGGTCATCTGTTAAAAAAGCCTTTAATGCTTATAAGATAACTATTATTGGTAGTAATA-GTCCA-TGCCCATGACATTCTTTAATG-----TTCAGGAGTATCAGAAATTTAAAGATTAGACTTAGTTATAAATA----GAATGTTTATTTAGGAACTTGGAGACATCTGGACATTTCACATCATGAAAGTAACAAAACCCT----CCCTCTTTTTGTGGCTCCAGGAAGAATACTGA----CTGCTG--TGGGAGAGGTTCTCACG-CACTGTGGGTACTGATGGTGCCCGAGAGCCGGGGAACGGCGGCGTC----------TCGCCCGGACTTCCTCCTTC-------------------------CCATATGGCAGGTGCCAGC-------------------------CTCTAACTGCCGTCAGCTGCCACCTCCAC-GCCATCTGTTTAGCTGACGGACAGGGAGCACCTACTGTGGGCCAAGCCCC-CAACAGGCACCAGAGAT---------------TGG---------------GTGGAGAC-AGACGAAACCAAGGCACAGACA--CATTCAATTAGT-CGTTTTATGGAGGAAAGAAGCAAGGA-CCACGCAGGAGAACAGCTTGTTCTTGACGTCTTCA--AGCAGAC-------ACTGAGGTCAGCTCT--TTA--GGCTGGGTCTCCTCGAGGTTGACCGGATGGGAAGGTTGTCTGCAAGTCACGTTTTAATTAATCTTTACAAGTTACTCAGATGAACTATTCCATTGGCTCTTTCTCATCCTGTGCCAGGAGACAAATTGTG---AAGCCCAGCAGCATACTCTGTTTTA-AAA--------TGCAGTTAT-AAAAAGGAATAAATACAAAAACAAA------GCAGCCATCCATTATTGATTGTTTTATGCTAA i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1350982 933 - 2905041 AGGTAGGTTCAGACAAAGAGCTGTTGGCTCCACATGGTGGCAGC-TCCTGTGCCTCCA-GCCTGAACTGAGGGTCTGTGGCTGCAGG------CCCAGCTCA--GGGCA---------------GGAGCTGCTGGAAAC----------------------TGTGGAATGACATGAAATAATCCCAGGT--GCAGTTTTTCTGGTCATCTGTTAAAAAAGACCTTAATGCTTATAAGATAACTATTATTGGCAGTAATA-GTCCA-GGCCTGTGACATTCTTTAATG-----TTTGGGAGTGTCAGAAATTTGAAGATTACACTTAGTTGTAAATA----GAATGTTTATTTAGGAACTTGGAGACATCTGGGCATTTCATGTAATGAAAGTAACAAAACCCT----CCCTCTTCGCGTGGCTCCAGGAAGAATCGTGA----TTGCTG--TGGGAGGGGTTCTCACG-CGCTGTGGGTGTGAATGGTGCCCAAGAGCCGGGGAACGGTGGCGTC----------CCACCCAGGCTTCCTCCTTC-------------------------CCATGTGGCAGGTGCCAGC-------------------------CTCTAACCGCCGCTGGCTGCCACCTTCAC-GCCATCTGTTTAGCTGACGGACAGGGAACACCTACTGCGGGCCAAGCCCC-CGAAAGGCACCAGAGAC---------------TGG---------------GTGGAGAC-AGATGAAACCAAGACACAGACA--CATTCAATTAGT-CATTTTATGGAGGAAAGAAACAAGGG-CCGCGCATGAGAACAGCTTGTTCTTGACGTCTTCA--ACGAGAC-------ACTGAGGTCAACTCT--TTAGGGGCTGGGTCTCCTCGAGGTTGA-CGGACGGGGAGGTTTTCTGCACGTCACAGTTTAGTTAATCTTTAAAAGTTACTTAGATGAACGATCTCATTGGCTATTTCTCATCTTGTCCCATTAGACACATTGTG---AAGCCCAGCAGCACA--CTGTTTTA-AAA--------TGCAGTTAT-AAAAAGGGATAAATACAAAAACAAA------ACAGCCGACCATTATTGATTGTGTTATGCTAA i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1316345 934 - 2164891 AGGTAGGTTCAGACAAAGAGCTGTTGGCTCCACACGGCGGCAGC-GCCTGTGCCTCTA-GCCTGAACTGAGGGTTTGTGGCTGCAGG------CCCAGCTCA--GGGCA---------------GGAGCTGCTGGAAAC----------------------TGTGAAATGACACGAAAGAGTCCCAGGT--GCAGTTTTTCTGGTCATCTGTTAAAAAAGACTTTAATGCTTACAAGGTAACTATTATTGGTAGTAATA-GTCCA-GGCCCATGACATTCTTTAATG-----TTCGGGAGTATTAGAAATTTAAAGATTACACTTAGTTGTAAATA----GAATGTTTATTTAGGAACTTGGAGACATCTGGGCATTTCATGTAGTGAAAGTAACAAAGCCCT----CCCTATTTGCGTGGCTCCA-GAAGAATCATGA----GTGCTA--TGGGAGAGGTTCTCATG-CGCTGTGGGTGTGGATGGTGCCCAAGAGCC-GGGAATGGCGGCGTC----------CCACCCGGGGTTCCTCCTTC-------------------------CCATGTGGCAGGTGCCAGC-------------------------CTCTAACCGCCGTCGGCTGCCACCTCCAC-GCCATCTGTTTAGCTGACAGACAGGGAGCACCTACTGTGGGCCAAGCCCC-CGGCAGGCACCAGAGAT---------------TGG---------------GTGGAGAC-AGACAAAACCAAGGCACAGACA--CATTCAATTAGT-CATTTTATGGAGGAAAGAAACAAGGA-CCGCGCATGAGAACAGCTTGTTCTTGACGTCTTCA--ACCAGAC-------ACTGAGGTCAACTCT--TTAGGGGCTGGGTCTCCTCGACGTTGACTGGATGGGGAAGCTGTCTGCACATCACATTTTAATTAATCTTTAAAAGTTACTTAGATGAACTACTTTATTGGCTATTTATCATCCTGTGCCAGTAGACAAATTGTG---AAGCCCAGCAGCATACTCTGTTTTA-AAA--------TGCAGTTAT-AAAAAGGAATAAATACAAAAACAAA------ACAGCCAACCGTTATTGATTGTGTTATGCTAA i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1562679 936 - 1813869 aGGTAAGTTCAGACAAAGAGCTGTTAGCTCCACATGGTGGTAGCTTCCTGTGCCTCCA-GACTGAACTGAGGGTCCGTGGCTGCAGG------CCCAGCTCA--GGGCA---------------GGAGCTACTGGAAAC----------------------TGCGGAATGACACGAAATAGTCCCATGT--GCAGTTTTTCTGGTCATCTGTTAAAAAAGCCTTTAATGCTTATAAGGTAACTATTATTGGTAGTAATA-GTCCA-GGCCCATGACATTCTTCAATG-----TTCAGGAGTATCAGAAATTTAAAGATTAGACTTAGTTATAAATA----GAATGTTTATTTAGGAACTTGGAGACATCTGGGCATTTCACGTAATGAAAGTAACAAAACCCT----CCCTCTTTGCATGGCTCCAGGAAGAATCATGA----CTGCCG--TGGAAGCAGTTCTCACG-CGCTGTGGATGTGGATGGCGTCCAAGAGCCGGGGAACAGCAGCATC----------CCACCCGGGCTTCCTCCTTC-------------------------CCATGT-GCAGGTGCCAGC-------------------------CTCTAACTGCCGTCGGCTGCCACCTCCAC-GCCATCTGTTTAGCTGACGGACAGGGAGCACATACTGTGGGCCAAGCTTC-CGACAGGCACCAGAGAT---------------TGG---------------GTGGAGAC-AGACGAAATCAAGGCACAGACA--CGTTCAATTAGT-CGTTTTATGGAGGAACGAAACAAGGA-CCATGCATGAGAATGGCTTGTTCTTGATGTCTTCA--ACCAGAC-------ACTGAGGTCAACCCT--TTAGGGGCTGGGTCTCCTCAAGGTTGACTGGACGGGAAGGTTGTCTGCATGTCACATTTTAACTAATCTTTAAAAGTTACTTAGATGAACTATTTCATTGGCTAGTTCTCATCCTGTGCCAGTAGACAAACTGTG---AAGCCCAGCAGCATACTCTGTTTTA-AAA--------TGCAGTTATAAAAAAGGAATAAATACGGAAACAAA------GCAGCCAACCACTATTGATTGT-TTATGCTAA i aotNan1.NW_018494782v1 C 0 C 0 s canFam3.chr1 56224077 962 + 122678785 AGGTAAGTGCAAGCAAAGGGCTGTGGGCTCC---------CAGA-CCGAGGGCCCCAT-GCCTG--CTTA---TCCACGGCCACAGGACAAATTCCAGATCA--GAGAACTGCAAGTTGGACATGGACGTGTGAGAAACTGTAAACCTGAGTGCTTTAAAATGTGGAGTGACTAGAAGCAGTTTGATCT--ATAATATCACTGATCACCCGTTAAAAAAGACGTAAGTGT--------CGGCCTTTACTAATAGTAGCAGGTCCA-GGTCTGTGGCACTGGTTATGA-----TGCAAGACCATATGCaatttttaaattatatttagttacacatataattaatatttatttaGGAACTTTGGAACTGCTGGGTATTTCGTGGGATGCAAGTAAGCAAGCAGC----CCTCTCTTGA--GGCTGCAGAGTGCGTGATGC----ATCCCGGCTGGGAGAGGACGGCACGTTTCTGGGCTTGCAGA----GTCTGCAAAGTCGGGAGCAGCGGTGCCCCATGGAG-TTCGTTCTGGCCTTCTTCACT-------------------------CCACAGGGCAAGTCCCAGCTCT----------------------CTCTCCTCCAGATCGG-GGCTACATCAGGGATCAT-TATTCA-CTTAGAAATTGtgagcacctactgtgtgccaagccccgtggcaggcatcagagaa----------------ga---------------caggagacaagaGAATACAAAG-CACAGACA--GATCCAAACAGT-AGGTTTA--GTGGAGACAGACATCGG-CCC--CAATAGGACAGCAGGT--CTGGCTTCCTCAGGACCAGATGGAGGTGGATGGGGTAAAATTTCCTTAGGACTGAGCTCTCCTCCATGTCACCTGG--GAAAGGGGTGCCTACATGTCACACATAACTGATGTTTTTAGAGTTACTTA-----ACTATTTTATTGGCTGTTTCTCTCTTTGTGCCAATAAACAAATTGTG--AAAACCCAGTAGCACACTATGTTTAAGAAA--------TGCAGCTTT-AAAAAGGTATAAAAATGAAAAT---------ACAAAGGGTCATT----ATTGTGCTCTACTAA i canFam3.chr1 I 572 I 812 s dasNov3.JH569188 649629 953 + 760995 AGGTAAGTTCAATCAAAGA---TTTGACTTCAACCTTAGACAAC-TCATGTGTCTCCCGGGCTGAACTTA------GTAGGTACAGC---------AGCTTACTAGAGT---------------GGAGCTGTTACCAAC----------------------TGTGGAGTGCTATGAGACAGTGTCATCT--CAAGATTTACCAATC---------AGATGATTTTAATCTTTATAA--------CTATTTGTAGTAATA-GCTCAGGGATTGTGAGATCCTTTTTTCTGTCTTTCCAGAATATCAGAAGtattttatgta---ttaattataaatataattaatatttataCAGGAACTTAGGAACTTCTGGATATTTCATACAATGAATG-----ATACACTGATACACTCTTTATGAGGCTCAAGTGTGAATAATAAATTCCTGTCA--AGGAAGGTATTGACACA-TTTTATATCCCTTTAGGGCTCTTGAGAATCAATGAGCAATGGCATTTTATGGAGTTTCATTCTGGCTTTTTCTTGT-------------------------TGATTTGGCAGTGTTTACC------------------------CTTCTCCCCTTCAGTGGGTGGTATAtccactgatacttatt---------------gagtgcctactatgtgtcaagccctgtgataactgccagagatacatctgtgaaatgatggtccctaaaggagcattcggagac-agacaaaaagaagtcacagacaagagtcaaatttgtgagttttattggggaaagaaataagggcccatgggagagagcagctggcacttCCCTTCTTCAGAACCAGAC-------AGTGACGTAAGATCTAATTAAGGATTGAGATTTCCTGGATCT---TGGAAAATGGGCCTGTCAACATTTCAATTTTTAATTGATTTTTTAAAGTTACTTATTTTAAACACCTAGCTCACTATTTCCTCATCTATGCCAATAGACAAAGTGTGTGAAAACCTAGCAGCATGACACATTTTA-AAAGATGGAATTGTAGTTTT-AAAGAAGTGAAAAC---AAAACAAA------ACACCCA--------TTATTGTACCATATGAA i dasNov3.JH569188 C 0 I 1 e otoGar3.GL873575 10988881 3627 - 12073884 I a score=1469976.000000 s hg38.chr6_KB021644v2_alt 164708 149 + 185823 AA-CACTGTTTTAATTTTGTGGTA---TGT-TTTGGGGACTTTTTCCAATTTATTCTCTGAAATAATGTTGTATTCAGAGCGTACACCAAGAATAGGAGC--CCGTTT--TTTATCCATTTAAGAT--T-CTCTCCC-------------------------GTTTCTATCTATTGC----TCATTTGCT s panTro5.chr6 173627637 149 + 175400573 AA-CACTGTTTTAATTTTGTGGTA---TGT-TTTGGGGAATTTTTCCAATTTTTTCTCTGAAATAATGTTGTATTCAGAGCATACACCAAAAATAGGAGC--CTGTTT--TTTATCCATTTAAGAT--T-CTCTCCC-------------------------GTGTCTGTCTATTGC----TCATTTGCT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171854772 149 + 173848474 AA-CACTGCTTTAATTTTGTGGTA---TGT-TTTGGGGAATTTTTCCAATTTATTCTCTGAAATAATGTTGTATTCAGAGCATACACCAAAAATAGGAGC--CCGTTT--TTTATCCATTTAAGAT--T-CTCTCCC-------------------------GTGTCTATCTATTGC----TCATTTGCT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11537675 149 - 12463322 AA-CACTGTTTTAATTTTGTGGTA---TGT-TTTGGGGAATTTTTCCAGTTTATTCTCTGAAATAATGTTGTATTCAGAGCATACACCAAAAATAGGAGC--CCATTT--TTTATCCATTTAAGAT--T-CTCTGCC-------------------------ATGTCTGTCTATTGC----TCATTTGCT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156370063 147 + 157873769 AA-CACT--TTTAATCTTGTGGTA---TGT-TTTGGGGAATTTTTCCAATTTATTCTCTGAAATAA---TGTATTCAGAGCATACACCAAAAATAGGAGC--CTGTTT-CTTTATCCATTTAAGATTCT-CTCTCCC-------------------------GTTTCTATCTATTGC----TCATTTGCT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170398369 152 + 172585720 AA-CACTGTTTTAATTTTGTGGTA---TGT-TTTGGGGAATTTTTCCAATTTATACTTTGAAATAATGCTGTATTCAGAGCATACACCAAAAACAGGGGC--CCGTTT-CTTTATCCATTTACGAT--T-CTCTCCC-----------------------TTGCTTCTATCTATTGC----TCATTCACT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169141652 152 - 170955103 AA-CACTGGTTTAATTTTGTGGTA---TGT-TTTGGGGAATTTTTCCAATTTATACTTTGAAATAATGTTGTATTCAGAGCATACACCAAAAACAGGGGC--CCGTTT-CTTTATCCATTTAAGAT--T-CTCTCCC-----------------------TTGCTTCTATCTATTGC----TCATTCACT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8428031 152 + 10161646 AA-CACTGTTTTAATTTTGTGGTA---TGT-TTTGGGGAATTTTTCCAATTTATACTTTGAAATAATGTTGTATTCAGAGCATACACCAAAAACAGGGGC--CCGTTT-CTTTATCCATTTAAGAT--T-CTCTCCC-----------------------TTGCTTCTATCTATTGC----TCGTTCACT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1458409 152 + 3144229 AA-CACTGTTTTAATTTTGTGGTA---TGT-TTTGGGGAATTTTTCCAATTTATACTCTGAAATAATGTTGTATTCAGAGCATACACCAAAAATAGGGGC--CCGTTT-CTTTATCCATTTAAGAT--T-TTCTCCC-----------------------TTGTTTCTATCTATTGC----TCATTCACT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96743663 150 + 98384682 AA-CAC--TTTTAATTTTGTGGTA---TGT-TTTGGGGAATTTTTCCAATTTATACTCTGAAATAATGTTGTATTCAGAGCATACACCAAAAATAGGGGC--CCGCTT-CTTTATCCATTTAAGAT--T-CTCTCCC-----------------------TTGTTTCTATCTATTGC----TCATTCACT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8305677 152 - 10857215 AA-CACTGTTTTAATTTTGTGGTA---TGT-TTTGGGGAATTTTTCCAATTTATACTCTGAAATAATGTTGTATTCAGAGCATACACCAAAAATAGGGGC--CCGTTC-CTTTATCCATTTAAGAT--T-CTCTCCC-----------------------TTGCTTCTATCTATTGC----TCATTCACT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15669752 151 - 23502949 AA-CACTGTTTTAATTTTGTGGTA---TGT-TTTGGGGAATTTTTCCAATTTATACTCTGAAATAA-GTTGTATTCAGAGCATACACCAAAAATAGGGGC--CCGTTT-CTTTATCCATTTAAGAT--T-CTCTCCT-----------------------TTGTTTCTATCTATTGC----TCAGTCACT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169952934 152 + 171630274 AACCACTCTTTTAATTTTGTGGAA---TGT-TTTGGGGAA-TTTTCCAATTTATACTCCAAAATAATGTTGTATTCAGAGCATACACCAAAAATAGGAGC--CCATTT-CTTTATCCATTTAAGAT--T-CTCTCTC-----------------------CTGTTTCTATGTGTTGG----TCATTTGCT i calJac3.chr4 C 0 I 22 s saiBol1.JH378287 1351915 152 - 2905041 AACCACTGTTTTAGTTTTGTGGTA---TGT-TTTGGGGAA-TTTTCCAATTTATCCTCTAAACTAATGTCGTATTCAGAGCAGGCACCAAAAGTAGGAGC--CCATTT-CTTTAACCACTTAAGAC--C-TTCTCTC-----------------------CTGTTTCGATGTGTTGA----TCATTTGCT i saiBol1.JH378287 C 0 I 21 s cebCap1.NW_016107695v1 1317279 152 - 2164891 AAACACTGTTTTGATTCTGTGGTA---TGT-TTTGGGGAA-TTTTCCAGTTTATCCTCTAAAATAATGTTGTATTCAGAGCACACACCAAAAATAGGAGC--CCATTT-CTTTATCCATTTAAGAC--T-GTCTCTC-----------------------CTGTTTCGATGTGTTGG----TCATTTGCT i cebCap1.NW_016107695v1 C 0 I 46 s aotNan1.NW_018494782v1 1563615 154 - 1813869 AACCACTGTTTTAATTTCGTGGTG---TGT-TTTGGGGAA-TTTTCCAATTTATCCTCTAGAATAATGTTGTATTCAGTGTATACACCAAACATAGGAGCAAACATTT-CTTCATCCACTTAAGAT--T-CTCTCTC-----------------------CTGTTTCTATGTGTTGG----TCATTTGCT i aotNan1.NW_018494782v1 C 0 I 21 s canFam3.chr1 56225851 151 + 122678785 AA-TAGTCTTTTAATCTTGTGATA---TTTCTTTTGAAAAATTTTCCAATACATATTTCGAAATAGTGTTATATTCA-TGCATACATTTAAAACAGTAGC--CAGTT---GTTTTTCATTTAAGAT--CGTTATCAC-----------------------CTGTTTCTATGCATTAC----TCCTTTATT i canFam3.chr1 I 812 I 18 s dasNov3.JH569188 650583 183 + 760995 AA-CATTGTTTTGATTTTATGGTAGTTTTC-TTTTGGAAGTTTTCCCAATATGTGCTCTTAAATAATGTTGCATTCAAGCCATACCTTAAAAACAATAGT--CTATTTTTTTTTTCCATTTAGGAT--T-CTATCACAAGAGATTTCTCCTTGATATATATAGTTTTCATTTATCGCATTTTCAATAACT i dasNov3.JH569188 I 1 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I a score=286010.000000 s hg38.chr6_KB021644v2_alt 164857 28 + 185823 GAACCTCTTGTCTCTTTGACTAACAGTA s panTro5.chr6 173627786 28 + 175400573 GAACCTCTTGTCTCTTTGACTAACAGTA i panTro5.chr6 C 0 I 5 s panPan2.chr6 171854921 28 + 173848474 GAACCTCTTGTCTCTTTGACTAACAGTA i panPan2.chr6 C 0 I 5 s gorGor5.CYUI01015032v1 11537824 28 - 12463322 GAACCTCTTGTCTCTTTGACTAACAGTA i gorGor5.CYUI01015032v1 C 0 I 5 s nomLeu3.chr3 156370210 28 + 157873769 GAACCTCTTGTCTCTTTGACTAACAGTA i nomLeu3.chr3 C 0 I 5 s rheMac8.chr4 170398521 28 + 172585720 GAACCTCTTGTCCCTTTGACTAACTGTA i rheMac8.chr4 C 0 I 5 s macFas5.chr4 169141804 28 - 170955103 GAACCTCTTGTCCCTTTGACTAACTGTA i macFas5.chr4 C 0 I 5 s macNem1.NW_012011000v1 8428183 28 + 10161646 GAACCTCTTGTCCCTTTGACTAACTGTA i macNem1.NW_012011000v1 C 0 I 5 s cerAty1.NW_012002071v1 1458561 28 + 3144229 GAACCTCTTGTCCCTTTGACTAACTGTA i cerAty1.NW_012002071v1 C 0 I 5 s chlSab2.chr13 96743813 28 + 98384682 GAACCTCTTGTCCCTTTGACTAATTGTA i chlSab2.chr13 C 0 I 5 s manLeu1.NW_012106474v1 8305829 28 - 10857215 GAACCTCTTGTCCCTTTGACTAACTGTA i manLeu1.NW_012106474v1 C 0 I 5 s colAng1.NW_012114488v1 15669903 28 - 23502949 GAACCTCTTGTCCCTTTGACCAACTGTA i colAng1.NW_012114488v1 C 0 I 5 s calJac3.chr4 169953108 28 + 171630274 GAACCTCTTGTCCCTTTGACTAATGGTA i calJac3.chr4 I 22 I 5 s saiBol1.JH378287 1352088 28 - 2905041 GAACCTCTTGTCCCTTTGACTAATGGTA i saiBol1.JH378287 I 21 I 5 s aotNan1.NW_018494782v1 1563790 28 - 1813869 GAACCTCTTGTCCCTTTGACTGATGGTA i aotNan1.NW_018494782v1 I 21 I 5 s canFam3.chr1 56226020 28 + 122678785 GAGCCTCTGGACCCTATGACTAACAGTA i canFam3.chr1 I 18 I 5 s dasNov3.JH569188 650766 28 + 760995 GATGCTATTGTACCTTTAACAGCATGTA i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e cebCap1.NW_016107695v1 1317431 46 - 2164891 I a score=824695.000000 s hg38.chr6_KB021644v2_alt 164885 86 + 185823 -TTTAAAGGTCTAATGAAATATTTCAAAGCAGTTATGA--------ATAATGAGGTAATAGATGAGTACA-----AGCCAC----TAGCAGAAGACATGAAATG s panTro5.chr6 173627819 86 + 175400573 -TTTAAAGGTCTAATGAAATATTTCAAAGCAGTTATGG--------ATAATGAGGTAATAGATGAGTACA-----AGCCGC----TAGCAGAAGACATGAAATG i panTro5.chr6 I 5 C 0 s panPan2.chr6 171854954 85 + 173848474 -TTTAAAGGTCTAATGAAATATTTCAAAGCAGTTATGG--------ATAATGAGGTAATAG-TGAGTACA-----AGCCGC----TAGCAGAAGACATGAAATG i panPan2.chr6 I 5 C 0 s gorGor5.CYUI01015032v1 11537857 85 - 12463322 -TTTAAAGGCCTAATGAAATATTCCAAAGCAGTTATGA--------ATAATGAGGTAATAG-TGAGTACA-----AGCCAC----TAGCAGAAGACATGAATTG i gorGor5.CYUI01015032v1 I 5 C 0 s nomLeu3.chr3 156370243 86 + 157873769 -TTTAAAGGTCTAATGAAATATTTTAAAGCAGTTATGA--------ATAATGAGATAATAGATGAGTACA-----AGCCAC----TAGCAGAAGACATGAAATG i nomLeu3.chr3 I 5 C 0 s rheMac8.chr4 170398554 94 + 172585720 -TTTAAAGGCCTAATGAAATATTTCAAAGCAGTTATGAATAATCAGATAATCAGATGACAGATGAGTACA-----AGCCAC----TAGCAGAGGACATGAAACG i rheMac8.chr4 I 5 C 0 s macFas5.chr4 169141837 94 - 170955103 -TTTAAAGGCCTAATGAAATATTTCAAAGCAGTTATGAATAATCAGATAATCAGATGACAGATGAGTACA-----AGCCAC----TAGCAGAGGACATGAAACG i macFas5.chr4 I 5 C 0 s macNem1.NW_012011000v1 8428216 94 + 10161646 -TTTAAAGGCCTAATGAAATATTTCAAAGCAGTTATGAATAATCAGATAATCAGATGACAGATGAGTACA-----AGCCAC----TAGCAGAGGACATGAAACG i macNem1.NW_012011000v1 I 5 C 0 s cerAty1.NW_012002071v1 1458594 94 + 3144229 -TTTAAAGGCCTAATGAAATATTTCAAAGCAGTTATGAATAATCAGATAATCAGATGACAGATGAGTACA-----AGCCAC----TAGCAGAGGACATGAAATG i cerAty1.NW_012002071v1 I 5 C 0 s chlSab2.chr13 96743846 94 + 98384682 -TTTAAAGGCCTAATGAAATATTTCAAAGCAGTTATAAATAATCAGATAATCAGATGACAGATGAATACA-----AGCCAC----TAGCAGAGGACATGAAAAG i chlSab2.chr13 I 5 C 0 s manLeu1.NW_012106474v1 8305862 94 - 10857215 -TTTAAAGGCCTAATGAAATATTTCAAAGCAGTTATGAATAATCAGATAATCAGATGACAGATGAGTACA-----AGCCAC----TAGCAGAGGACATGAAACG i manLeu1.NW_012106474v1 I 5 C 0 s colAng1.NW_012114488v1 15669936 86 - 23502949 -TTTAAAGGTCTAATGAAATATTTCAAAGCAGTTATGA--------ATAATCAGATGACAGATGAGTACA-----AGCCAC----TAGCAGAGGACATGAAATG i colAng1.NW_012114488v1 I 5 C 0 s calJac3.chr4 169953141 86 + 171630274 -TTTAAAGGTCTAATGAAATATTTCAAAGCAGTTATGA--------ATAATGAGATGGTGGCTGAGTACA-----AGCCAC----CGGGAGAAGACGTGACGTG i calJac3.chr4 I 5 C 0 s saiBol1.JH378287 1352121 86 - 2905041 -TTTAAAGGTCTAGTGAAATATTTGAAAGCAGTTATGA--------AAAATGAGCTGGCAGATGAGTACG-----AGCCAC----CAGCAGAAGACACGGAGTA i saiBol1.JH378287 I 5 C 0 s cebCap1.NW_016107695v1 1317477 86 - 2164891 -TTTAAAGGTCTGATGAAATATTTCAAAGAAGTTACGA--------ATAATGAGCTGGTAGATGAGTACA-----AGCCAC----CAGCAGAAGACATGAAGCG i cebCap1.NW_016107695v1 I 46 C 0 s aotNan1.NW_018494782v1 1563823 86 - 1813869 -TTTAAAGGTCTAATGAAATACCTCAAAGCAGTTATGA--------ATAATGAGATGGTAGATGAGTGCA-----AGCCGC----CAGTAGAAGACACGAAGTG i aotNan1.NW_018494782v1 I 5 C 0 s canFam3.chr1 56226053 91 + 122678785 -CCCACAGGTATGATGGAATATAGTGAAGAATGTATAA--------ATAACAAGGTAATGGATGCTCACGTACTTAGTTAC----CAGACGAAGAAATAAAATA i canFam3.chr1 I 5 C 0 s dasNov3.JH569188 650794 92 + 760995 TGTTAAAGGCAGTGTGAAatatttaaaaaatgaaatgc--------ataacaggatgatagatacccatg----tatccacctttccgtttaagaaataatata i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I a score=1582012.000000 s hg38.chr6_KB021644v2_alt 164971 197 + 185823 TGGCAAATGCTG-CAAAGCAAAGGCTTCACTTCCATCGCTGccttctcccattcctcaagttatcactgactgcattggtgtttattcttcccaaacatctattcgtattttactacaaatgtatggaggcttgtgcaatatttgatattgatc--------ta----tttttttaatgtgtataaggggaatcttacat-tatacatttt s panTro5.chr6 173627905 197 + 175400573 TGGCAAATGCTG-CAAAGCAAAGGCTTCACTTCCATCGCTGccttctcccattcctcaagttatcactgactgcattggtgtttattcttcccaaacatctattcgtattttactacaaatgtatggaggcttgtgcaatatttgatattgatc--------ta----tttttttaatgtgtataaggggaatcttacat-tatacatttt i panTro5.chr6 C 0 C 0 s panPan2.chr6 171855039 197 + 173848474 TGGCAAATGCTG-CAAAGCAAAGGCTTCACTTCCATCGCTGccttctcccattcctcaagttatcactgactgcattggtgtttattcttcccaaagatctattcgtattttactacaaatgtatggaggcttgtgcaatatttgatattgatc--------ta----tttttttaatgtgtataaggggaatcttacat-tatacatttt i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11537942 197 - 12463322 TGGCAAATGCTG-CAAAGCAAAGGCTTCACTTCCATCGCTGctttctcccattcctcaagttatcactgactgcattggtgtttattcttcccaaacatctattcgtatcttactacaaatgtatggaggcttgtgcaatatttgatattgatc--------ta----tttttttaatgtgtataaggggaatcttacat-tatacatttt i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156370329 195 + 157873769 TGGCAAATGCTGCCAAAGCAAAGGCTTGACTTCCATCGCTGccttctcccattcctcaagttatcactgactgcattggtgtttattcttcccaaacatctattagtattttactacaaatgtatggagccttgggcaatatttgatattgatc--------ta---ttttttttaatgtgtataaggggaatcttacat-t----atttt i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170398648 207 + 172585720 TGGTGAATGCCACCAAAGCAAAGGTTTCACttccatcgcttccttctcccattcctcaagttatcactgactgcattggtgtttattcttcccaaatatctcttcgtattttactacaaatgcatggaggtttgctcaatatttggtattgatcagtctgagta---ttttttttaatgtgtataaggggaatcttacat-tttacatttt i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169141931 207 - 170955103 TGGTGAATGCCACCAAAGCAAAGGTTTCACttccatcgcttccttctcccattcctcaagttatcactgactgcattgatgtttattcttcccaaatatctcttcgtattttactacaaatgcatggaggtttgctcaatatttggtattgatcagtctgagta---ttttttttaatgtgtataaggggaatcttacat-tttacatttt i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8428310 207 + 10161646 TGGTGAATGCCACCAAAGCAAAGGTTTCACttccatcgcttccttctcccattcctcaagttatcactgactgcattggtgtttattcttcccaaatatctcttcgtattttactacaaatgcatggaggtttgctcaatatttggtattgatcagtctgagta---ttttttttaatgtgtataaggggaatcttacat-tttacatttt i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1458688 209 + 3144229 TGGCGAATGCTGCCAAAGCAAAGGTTTCACttccatcgcttccttctcccattcctcaagttatcactgactgcattggtgtttattcttcccaaatatctattcgtattttactacaaatgtgtggaggtttgctcaatatttgatattgatcagtctgtgtatt-ttttttttaacgtgtataaggggaatcttacat-tttacatttt i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96743940 208 + 98384682 TGGCGAATGCTGCCAAAGCAAAGGCTTCACttccatcgcttccttctcccattcctcaagttatcactgactgcattggtgtttattcttcccaaatatctattcgtgttttactacaaatgtgtggaggtttgctcaatatttggtattgatcagtctgtgta-t-ttttttttaacgtgtataagggaaatcttacat-cttacatttt i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8305956 207 - 10857215 TGGCGAATGCTGCCAAAGCAAAGGCTTCACTTCCATTGCttccttctcccattcctcaagttatcactgactgcattggtgtttattcttcccaaatatctcttcgtattttactacaaatgtatggaggtttgctcaatatttggtattgatcagtctgtgta---ttttttttaacgtgtataaggggaatcttacat-tttacatttt i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169953227 200 + 171630274 TGACGGATGCTGCCAGGGC-AGGGctccactcccaccgcttccttctcccgttcctgaagttatcaccgcctgaattggtgtgtattcttcccaaacatctactcgtgttttactacaaatgtgtggaggctttcagaatatttggaattgatc--------tatg-tttttttaaatgtgtctaaggggagtttcacct-tatacgtttt i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1352207 194 - 2905041 TGGCGAGTGCTGT-----C-AGGGCTTCACCGCCttcgctt-ctcctcccattcctgaggttagcaccgcctgaattggtgtttcttcttcccaaacatctattcgtattttactactaatgtgtggaggctttcacaatatttggaattgatc--------tatg-ttttttaaaatgtgtataaggggaatcttacct-gatatatttt i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1317563 201 - 2164891 TGAGGAATGCCGCCACGGC-AAGGCTTCTCTcccttcgctcccttctcccatccctgaggttatcgccgcctgaattggtgtttattcttcccaaacatctattcgtattttactacaaatgtgtgcaggctttaacagtatttggaattgatc--------tatgtttttttaaaatgtgtataagaggaatcttacct-tatacacttt i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1563909 199 - 1813869 TGCCGAGTGCTGCCAGGGC-AGGGCTTCACT-CCATCGCTTCCTTCTCCCGTTCCTGAAGGTGTCAGCGcctgaactggtgcttattcttcccaaacatctattcgcattttactacaaatgtctggaggctttcacaatctttggaattgatc--------tatg-tttttttaaatgtggataaggggaattttacct-tacacgtttt i aotNan1.NW_018494782v1 C 0 C 0 s canFam3.chr1 56226144 178 + 122678785 ------TTACCCACACATC-AGAGCTAGGcctcc----------tttcccgctgcagaaa-tagcatcgcctgaattaaca---atccttcccagacat-tattcatattttactacacacgtatggagtcttacacagtatttggtattgatg--------tacg-tgctttaaaatttatataagcataatcttgcat-tacat-tttt i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 650886 190 + 760995 ttgcaaatactg-ttcaacacagttcccaattccattcacttcctttcccatttcaaaagtcatcactgcctcagttggtatttatctttcctaaacattcatttgtcttttactataagagtatgctttcttatattatatttggta-tgatt--------tgta-tgtttttaaaTAT----------AATCATATATATATAAAATTT i dasNov3.JH569188 C 0 I 2870 e otoGar3.GL873575 10988881 3627 - 12073884 I e colAng1.NW_012114488v1 15670022 0 - 23502949 C a score=996523.000000 s hg38.chr6_KB021644v2_alt 165168 115 + 185823 tcatgactggcttcatatgttaaacatgttcctcatgagattaattcaggttgaggtgtgtagacactgttta----------------tttattaccacatcaatgaatgcattactattcacacagtcc s panTro5.chr6 173628102 115 + 175400573 tcatgactggcttcgtatgttaaacatgttcctcgtgagattaattcaggttgaggtgtgtagacactgttta----------------tttattaccacatcaatgaatgcattactattcacacaatcc i panTro5.chr6 C 0 C 0 s panPan2.chr6 171855236 115 + 173848474 tcgtgactggcttcgtatgttaaacatgttcctcgtgagattaattcaggttgaggtgtgtagacactgttta----------------tttattaccacatcaatgaatgcattactattcacacagtcc i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11538139 115 - 12463322 tcatgactggcttcgtatgttaaacatgttcctcgtgagattaattcaggttgaggtgtgtagatactgttta----------------tttattaccacatcaatgaatgcattactattcacacagtcc i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156370524 115 + 157873769 tcgtgactggcttcgtatgttaaacatgttcctcatgagattaattcaggttgaggtgtgtagataccgttta----------------tttattaccacatcaatgaatgcattactattcccacagtct i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170398855 114 + 172585720 tcatgactggctttgtatgttaaacatgttcctcgtgagattaattcaggttgagatgtgtag-tactgttta----------------tttattaccccatcaatgaatgcattactattcacacagtct i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169142138 114 - 170955103 tcatgactggctttgtatgttaaacatgttcctcgtgagattaattcaggttgagatgtgtag-tactgttta----------------tttattaccccatcaatgaatgcattactattcacacagtct i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8428517 114 + 10161646 tcatgactggctttgtatgttaaacatgttcctcgtgagattaattcaggttgagatgtgtag-tactgttta----------------tttattaccccatcaatgaatgcattactattcacacagtct i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1458897 114 + 3144229 tcatgactggctttgtatgttaaacatgttcctcgtgagattaattcaggttgagatgtgtag-tactgttta----------------tttattaccccaccaatgaatgaattactattcacacagtct i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96744148 114 + 98384682 tcatgactggctttgtatgttaaacatgttcctcgtgagattaattcaggttgagatgtgtag-tactgttta----------------tttattaccccaccaatgaatgaattactattcacacagtct i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8306163 114 - 10857215 tcatgactggctttgtatgttaaacatgttcctcgtgagattaattcaggttgagatgtgtag-tactgttta----------------tttattaccccaccaatgaatgcattactattcacacagtct i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169953427 120 + 171630274 ccatgactggctttgtatgtgaaacacgttcctcatgagactaatccgggtcgaggcatgtagatgctgttta-----------tcttgtttatgagtacatcgatgaatgcattgctgttcacacagtct i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1352401 120 - 2905041 ccatgactggctttgtatgtaaaacatgttcctcatgagattaatccaggttgaggtgtatagatactgttta-----------ttttatttattactacatcaatgaatgcactgctattcacacagtct i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1317764 114 - 2164891 ccaggactggctttgtatatgaaacatgttcctcatgagattaatccaggctgaggtgtgtagatactgttta----------------tttattactacatcaatg-atgcattgctattcacacagtcc i cebCap1.NW_016107695v1 C 0 I 1305 s aotNan1.NW_018494782v1 1564108 120 - 1813869 ccatgaccggctttgtatgtgaaacatgttcctcatgacattaatccaggttgaggtgtgtagacatggtcta-----------ttttatttattactacatcaatgaacgcattgctattcacacagtct i aotNan1.NW_018494782v1 C 0 C 0 s canFam3.chr1 56226322 121 + 122678785 taataacctgcttt-----ttaaaca-----cttctgagattaattcacattgaggtatatagatattgcttacttatttttatttttgtatattactgcatgaatgaatacctcattattcacatattcT i canFam3.chr1 C 0 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e dasNov3.JH569188 651076 2870 + 760995 I e colAng1.NW_012114488v1 15670022 0 - 23502949 C a score=49601.000000 s hg38.chr6_KB021644v2_alt 165283 8 + 185823 agtgtttt s panTro5.chr6 173628217 8 + 175400573 agtgtttt i panTro5.chr6 C 0 C 0 s panPan2.chr6 171855351 8 + 173848474 agtgtttt i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11538254 8 - 12463322 cgtgtttt i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156370639 8 + 157873769 cctgtttc i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170398969 8 + 172585720 cctgtttt i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169142252 8 - 170955103 cctgtttt i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8428631 8 + 10161646 cctatttt i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1459011 8 + 3144229 cctgtttt i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96744262 8 + 98384682 cctgtttt i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8306277 8 - 10857215 cctgtttt i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169953547 8 + 171630274 cctgttct i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1352521 8 - 2905041 cctgttct i saiBol1.JH378287 C 0 C 0 s aotNan1.NW_018494782v1 1564228 8 - 1813869 cctgttct i aotNan1.NW_018494782v1 C 0 C 0 s canFam3.chr1 56226443 8 + 122678785 CTGGTTTT i canFam3.chr1 C 0 I 371 e otoGar3.GL873575 10988881 3627 - 12073884 I e cebCap1.NW_016107695v1 1317878 1305 - 2164891 I e dasNov3.JH569188 651076 2870 + 760995 I e colAng1.NW_012114488v1 15670022 0 - 23502949 C a score=209747.000000 s hg38.chr6_KB021644v2_alt 165291 33 + 185823 cgtagacgtttacttgtttccaatatttcA----TCC s panTro5.chr6 173628225 33 + 175400573 catagatgtttacttgtttccagtgtttCA----TCC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171855359 33 + 173848474 catagacgtttacttgtttccagtatttcA----TCC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11538262 33 - 12463322 catagacgtttacttgtttctaatAGTTCA----TCC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156370647 33 + 157873769 catagacttttacttgtttccaatatttcA----TCT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170398977 33 + 172585720 catagacttttagttgtttccaatattttg----tcc i rheMac8.chr4 C 0 I 24 s macFas5.chr4 169142260 33 - 170955103 catagacttttagttgtttccaatattttg----tcc i macFas5.chr4 C 0 I 24 s macNem1.NW_012011000v1 8428639 33 + 10161646 catagacttttagttgtttccaatattttg----tcc i macNem1.NW_012011000v1 C 0 I 24 s cerAty1.NW_012002071v1 1459019 33 + 3144229 catagacttttagttgtttccaatattttg----tcc i cerAty1.NW_012002071v1 C 0 I 24 s chlSab2.chr13 96744270 33 + 98384682 catagacttttagttgtttccagtattttg----tcc i chlSab2.chr13 C 0 I 18 s manLeu1.NW_012106474v1 8306285 33 - 10857215 catagacttttagttgtttccaatattttg----tcc i manLeu1.NW_012106474v1 C 0 I 24 s calJac3.chr4 169953555 33 + 171630274 catagacttttagttgcttccagtatttca----cct i calJac3.chr4 C 0 I 19 s saiBol1.JH378287 1352529 37 - 2905041 catagacttttagttgtttctaatatttcatccgtct i saiBol1.JH378287 C 0 I 19 s aotNan1.NW_018494782v1 1564236 30 - 1813869 catggacttttagt---ttccaatatttcA----TCC i aotNan1.NW_018494782v1 C 0 I 25 e otoGar3.GL873575 10988881 3627 - 12073884 I e cebCap1.NW_016107695v1 1317878 1305 - 2164891 I e dasNov3.JH569188 651076 2870 + 760995 I e colAng1.NW_012114488v1 15670022 0 - 23502949 C e canFam3.chr1 56226451 371 + 122678785 I a score=14898.000000 s hg38.chr6_KB021644v2_alt 165324 2 + 185823 CA s panTro5.chr6 173628258 2 + 175400573 CA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171855392 2 + 173848474 CA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11538295 2 - 12463322 CA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156370680 2 + 157873769 CA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170399034 2 + 172585720 ca i rheMac8.chr4 I 24 C 0 s macFas5.chr4 169142317 2 - 170955103 ca i macFas5.chr4 I 24 C 0 s macNem1.NW_012011000v1 8428696 2 + 10161646 ca i macNem1.NW_012011000v1 I 24 C 0 s cerAty1.NW_012002071v1 1459076 2 + 3144229 ca i cerAty1.NW_012002071v1 I 24 C 0 s chlSab2.chr13 96744321 2 + 98384682 ca i chlSab2.chr13 I 18 C 0 s manLeu1.NW_012106474v1 8306342 2 - 10857215 ca i manLeu1.NW_012106474v1 I 24 C 0 s calJac3.chr4 169953607 2 + 171630274 ca i calJac3.chr4 I 19 C 0 s saiBol1.JH378287 1352585 2 - 2905041 ca i saiBol1.JH378287 I 19 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e aotNan1.NW_018494782v1 1564266 25 - 1813869 I e cebCap1.NW_016107695v1 1317878 1305 - 2164891 I e dasNov3.JH569188 651076 2870 + 760995 I e colAng1.NW_012114488v1 15670022 0 - 23502949 C e canFam3.chr1 56226451 371 + 122678785 I a score=209258.000000 s hg38.chr6_KB021644v2_alt 165326 27 + 185823 TTAGACCCTTGTGGAAGGACTTTTTCT s panTro5.chr6 173628260 27 + 175400573 TTAGACCCTTGTGGAAGGACTTTTTCT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171855394 27 + 173848474 TTAGACCCTTGTGGAAGGACTTTTTCT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11538297 27 - 12463322 TTAGACCCTTGTGGAAGGACTTTTTCT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156370682 27 + 157873769 TTAGGCCCTTGTGGAAGGACTTTTTCT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170399036 27 + 172585720 ttaggcccttgtggaagcactttttct i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169142319 27 - 170955103 ttaggcccttgtggaagcactttttct i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8428698 27 + 10161646 ttaggcccttgtggaagcactttttct i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1459078 27 + 3144229 ttaggcccttgtggaagcactttttct i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96744323 27 + 98384682 ttaggcccttgtggaagcactttttct i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8306344 27 - 10857215 ttaggcccttgtggaaacactttttct i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169953609 27 + 171630274 ttaggccctcgtggaagcaccttttct i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1352587 27 - 2905041 ttaggcccttgtggaagcaccttttct i saiBol1.JH378287 C 0 C 0 s aotNan1.NW_018494782v1 1564291 27 - 1813869 TTAGGCCCTTGTGGAAACACCTTTTCT i aotNan1.NW_018494782v1 I 25 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e cebCap1.NW_016107695v1 1317878 1305 - 2164891 I e dasNov3.JH569188 651076 2870 + 760995 I e colAng1.NW_012114488v1 15670022 0 - 23502949 C e canFam3.chr1 56226451 371 + 122678785 I a score=10768.000000 s hg38.chr6_KB021644v2_alt 165353 2 + 185823 AC s panTro5.chr6 173628287 2 + 175400573 AG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171855421 2 + 173848474 AG i panPan2.chr6 C 0 I 98 s gorGor5.CYUI01015032v1 11538324 2 - 12463322 AG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156370709 2 + 157873769 AG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170399063 2 + 172585720 ag i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169142346 2 - 170955103 ag i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8428725 2 + 10161646 ag i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1459105 2 + 3144229 ag i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96744350 2 + 98384682 aa i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8306371 2 - 10857215 ag i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169953636 2 + 171630274 ag i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1352614 2 - 2905041 ag i saiBol1.JH378287 C 0 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e aotNan1.NW_018494782v1 1564318 0 - 1813869 C e cebCap1.NW_016107695v1 1317878 1305 - 2164891 I e dasNov3.JH569188 651076 2870 + 760995 I e colAng1.NW_012114488v1 15670022 0 - 23502949 C e canFam3.chr1 56226451 371 + 122678785 I a score=28224.000000 s hg38.chr6_KB021644v2_alt 165355 4 + 185823 ACTG s panTro5.chr6 173628289 4 + 175400573 ACTG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171855521 4 + 173848474 ACTG i panPan2.chr6 I 98 C 0 s gorGor5.CYUI01015032v1 11538326 4 - 12463322 ACTG i gorGor5.CYUI01015032v1 C 0 I 48 s nomLeu3.chr3 156370711 4 + 157873769 ACTG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170399065 4 + 172585720 actg i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169142348 4 - 170955103 actg i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8428727 4 + 10161646 actg i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1459107 4 + 3144229 actg i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96744352 4 + 98384682 actg i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8306373 4 - 10857215 actg i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169953638 4 + 171630274 actg i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1352616 4 - 2905041 attg i saiBol1.JH378287 C 0 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e aotNan1.NW_018494782v1 1564318 0 - 1813869 C e cebCap1.NW_016107695v1 1317878 1305 - 2164891 I e dasNov3.JH569188 651076 2870 + 760995 I e colAng1.NW_012114488v1 15670022 0 - 23502949 C e canFam3.chr1 56226451 371 + 122678785 I a score=178457.000000 s hg38.chr6_KB021644v2_alt 165359 30 + 185823 GAAATCTAGGAGTGGAATAGCCGGGCCCCG s panTro5.chr6 173628293 30 + 175400573 GAAATCTAGGAGTCGAATATTTGGGCCTCG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171855525 30 + 173848474 GAAATCTAGGAGTGGAATAGCCGGGTCCCG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11538378 30 - 12463322 GAAATCTAGGAGTGGAATATTTGGGCCCCG i gorGor5.CYUI01015032v1 I 48 T 78 s nomLeu3.chr3 156370715 30 + 157873769 AAAATCTAGGAGTGGAATATTTGGGCCCCA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170399069 30 + 172585720 gaaatctaggagtggcatagctgggccacg i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169142352 30 - 170955103 gaaatctaggagtggcatagctgggccacg i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8428731 30 + 10161646 gaaatctaggagtggcatagctgggccacg i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1459111 30 + 3144229 gaaatctagaagtggcatagctgggccacg i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96744356 30 + 98384682 gaaatctagaagtggcatagctgggccacg i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8306377 30 - 10857215 gaaatctaggagtggaatagctgggccacg i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169953642 30 + 171630274 gaaatataggagtggaataggtgggccACG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1352620 30 - 2905041 gaaatctaggagtggaatagttgggccacg i saiBol1.JH378287 C 0 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e aotNan1.NW_018494782v1 1564318 0 - 1813869 C e cebCap1.NW_016107695v1 1317878 1305 - 2164891 I e dasNov3.JH569188 651076 2870 + 760995 I e colAng1.NW_012114488v1 15670022 0 - 23502949 C e canFam3.chr1 56226451 371 + 122678785 I a score=53562.000000 s hg38.chr6_KB021644v2_alt 165389 10 + 185823 GAGACACAGG s panTro5.chr6 173628323 10 + 175400573 GAGACACAGG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171855555 10 + 173848474 GAGCCACAGG i panPan2.chr6 C 0 C 0 s nomLeu3.chr3 156370745 10 + 157873769 GAGCCACAGG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170399099 10 + 172585720 gagtCACAGG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169142382 10 - 170955103 gagtCACAGG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8428761 10 + 10161646 gagtCACAGG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1459141 10 + 3144229 gagacacagg i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96744386 10 + 98384682 gagacacagg i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8306407 10 - 10857215 gagacacagg i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169953672 10 + 171630274 GAGCCACGGG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1352650 10 - 2905041 gagccacagg i saiBol1.JH378287 C 0 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e aotNan1.NW_018494782v1 1564318 0 - 1813869 C e cebCap1.NW_016107695v1 1317878 1305 - 2164891 I e dasNov3.JH569188 651076 2870 + 760995 I e colAng1.NW_012114488v1 15670022 0 - 23502949 C e canFam3.chr1 56226451 371 + 122678785 I e gorGor5.CYUI01015032v1 11538408 78 - 12463322 T a score=9403.000000 s hg38.chr6_KB021644v2_alt 165399 3 + 185823 AAC s panTro5.chr6 173628333 3 + 175400573 AAC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171855565 3 + 173848474 AAC i panPan2.chr6 C 0 C 0 s nomLeu3.chr3 156370755 3 + 157873769 AAC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170399109 3 + 172585720 AAA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169142392 3 - 170955103 AAA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8428771 3 + 10161646 AAA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1459151 3 + 3144229 aac i cerAty1.NW_012002071v1 C 0 C 0 s manLeu1.NW_012106474v1 8306417 3 - 10857215 aac i manLeu1.NW_012106474v1 C 0 I 264 s calJac3.chr4 169953682 3 + 171630274 AAC i calJac3.chr4 C 0 I 1186 s saiBol1.JH378287 1352660 3 - 2905041 aat i saiBol1.JH378287 C 0 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e aotNan1.NW_018494782v1 1564318 0 - 1813869 C e cebCap1.NW_016107695v1 1317878 1305 - 2164891 I e dasNov3.JH569188 651076 2870 + 760995 I e colAng1.NW_012114488v1 15670022 0 - 23502949 C e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C e gorGor5.CYUI01015032v1 11538408 78 - 12463322 T a score=3478.000000 s hg38.chr6_KB021644v2_alt 165402 2 + 185823 AC s panTro5.chr6 173628336 2 + 175400573 AC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171855568 2 + 173848474 GC i panPan2.chr6 C 0 T 147 s nomLeu3.chr3 156370758 2 + 157873769 AC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170399112 2 + 172585720 GC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169142395 2 - 170955103 GC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8428774 2 + 10161646 GC i macNem1.NW_012011000v1 C 0 C 0 s manLeu1.NW_012106474v1 8306684 2 - 10857215 AT i manLeu1.NW_012106474v1 I 264 C 0 s saiBol1.JH378287 1352663 2 - 2905041 gc i saiBol1.JH378287 C 0 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e aotNan1.NW_018494782v1 1564318 0 - 1813869 C e cebCap1.NW_016107695v1 1317878 1305 - 2164891 I e calJac3.chr4 169953685 1186 + 171630274 I e dasNov3.JH569188 651076 2870 + 760995 I e colAng1.NW_012114488v1 15670022 0 - 23502949 C e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C e cerAty1.NW_012002071v1 1459154 0 + 3144229 C e gorGor5.CYUI01015032v1 11538408 78 - 12463322 T a score=5900.000000 s hg38.chr6_KB021644v2_alt 165404 2 + 185823 AC s panTro5.chr6 173628338 2 + 175400573 AC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171855423 2 + 173848474 AC i panPan2.chr6 T 147 C 0 s nomLeu3.chr3 156370760 2 + 157873769 AC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170399114 2 + 172585720 AC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169142397 2 - 170955103 AC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8428776 2 + 10161646 AC i macNem1.NW_012011000v1 C 0 C 0 s manLeu1.NW_012106474v1 8306686 2 - 10857215 GC i manLeu1.NW_012106474v1 C 0 C 0 s saiBol1.JH378287 1352665 2 - 2905041 ac i saiBol1.JH378287 C 0 I 1156 e otoGar3.GL873575 10988881 3627 - 12073884 I e aotNan1.NW_018494782v1 1564318 0 - 1813869 C e cebCap1.NW_016107695v1 1317878 1305 - 2164891 I e calJac3.chr4 169953685 1186 + 171630274 I e dasNov3.JH569188 651076 2870 + 760995 I e colAng1.NW_012114488v1 15670022 0 - 23502949 C e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C e cerAty1.NW_012002071v1 1459154 0 + 3144229 C e gorGor5.CYUI01015032v1 11538408 78 - 12463322 T a score=3767.000000 s hg38.chr6_KB021644v2_alt 165406 2 + 185823 TA s panTro5.chr6 173628340 2 + 175400573 TG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171855425 2 + 173848474 TG i panPan2.chr6 C 0 C 0 s nomLeu3.chr3 156370762 2 + 157873769 TG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170399116 2 + 172585720 TG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169142399 2 - 170955103 TG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8428778 2 + 10161646 TG i macNem1.NW_012011000v1 C 0 C 0 s manLeu1.NW_012106474v1 8306688 2 - 10857215 TA i manLeu1.NW_012106474v1 C 0 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e saiBol1.JH378287 1352667 1156 - 2905041 I e aotNan1.NW_018494782v1 1564318 0 - 1813869 C e cebCap1.NW_016107695v1 1317878 1305 - 2164891 I e calJac3.chr4 169953685 1186 + 171630274 I e dasNov3.JH569188 651076 2870 + 760995 I e colAng1.NW_012114488v1 15670022 0 - 23502949 C e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C e cerAty1.NW_012002071v1 1459154 0 + 3144229 C e gorGor5.CYUI01015032v1 11538408 78 - 12463322 T a score=83088.000000 s hg38.chr6_KB021644v2_alt 165408 30 + 185823 GAAATCTAGGAGTGGAATATTTGGGCCCCG s panTro5.chr6 173628342 30 + 175400573 GAAATCTAGGAGTGGAATATTTGGGCCCCA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171855427 30 + 173848474 GAAATCTAGGAGTGGAATATTTGGGCCCTG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11538330 30 - 12463322 GAAATCTAGGAGTGGAATATTTGGGCCCCG i gorGor5.CYUI01015032v1 T 78 I 48 s nomLeu3.chr3 156370764 30 + 157873769 GAAATCTAGGAGTGGAATAGCTGGGCCATG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170399118 30 + 172585720 GAAATCTAGGAGTAGCATAGCTGGGCCACG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169142401 30 - 170955103 GAAATCTAGGAGTAGCATAGCTGGGCCACG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8428780 30 + 10161646 GAAATCTAGGAGTAGCATAGCTGGGCCACG i macNem1.NW_012011000v1 C 0 C 0 s manLeu1.NW_012106474v1 8306690 30 - 10857215 GAAATCTAGGAGTGGCATAGCTGGGCCACG i manLeu1.NW_012106474v1 C 0 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e saiBol1.JH378287 1352667 1156 - 2905041 I e aotNan1.NW_018494782v1 1564318 0 - 1813869 C e cebCap1.NW_016107695v1 1317878 1305 - 2164891 I e calJac3.chr4 169953685 1186 + 171630274 I e dasNov3.JH569188 651076 2870 + 760995 I e colAng1.NW_012114488v1 15670022 0 - 23502949 C e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C e cerAty1.NW_012002071v1 1459154 0 + 3144229 C a score=33799.000000 s hg38.chr6_KB021644v2_alt 165438 16 + 185823 GAGCCACAGGAATGCG s panTro5.chr6 173628372 16 + 175400573 GAGCCACGGGAACGCA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171855457 16 + 173848474 GAGCCACGGGAATGCA i panPan2.chr6 C 0 T 49 s gorGor5.CYUI01015032v1 11538408 16 - 12463322 GAGCCACGGGAACGCA i gorGor5.CYUI01015032v1 I 48 C 0 s nomLeu3.chr3 156370794 15 + 157873769 GAGCCACAGGAACCA- i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170399148 16 + 172585720 GAGTCACAGGAAAGCA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169142431 16 - 170955103 GAGTCACAGGAAAGCA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8428810 16 + 10161646 GAGTCACAGGAAAGCA i macNem1.NW_012011000v1 C 0 C 0 s manLeu1.NW_012106474v1 8306720 16 - 10857215 GAGACACAGGAACATG i manLeu1.NW_012106474v1 C 0 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e saiBol1.JH378287 1352667 1156 - 2905041 I e aotNan1.NW_018494782v1 1564318 0 - 1813869 C e cebCap1.NW_016107695v1 1317878 1305 - 2164891 I e calJac3.chr4 169953685 1186 + 171630274 I e dasNov3.JH569188 651076 2870 + 760995 I e colAng1.NW_012114488v1 15670022 0 - 23502949 C e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C e cerAty1.NW_012002071v1 1459154 0 + 3144229 C a score=94243.000000 s hg38.chr6_KB021644v2_alt 165454 34 + 185823 CTGGAAATCTAGGAGTGGAATAGCCGGGCCCCGG s panTro5.chr6 173628388 34 + 175400573 CTGGAAATCTAGGAGTGGAATATTTGGGCCCCGG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171855424 34 + 173848474 CTGGAAATCTAGGAGTGGAATATTTGGGCCCTGG i panPan2.chr6 T 49 C 0 s gorGor5.CYUI01015032v1 11538424 34 - 12463322 CTGGAAATCTAGGAGTGGAATATTTGGGCCCCGG i gorGor5.CYUI01015032v1 C 0 T 98 s nomLeu3.chr3 156370809 34 + 157873769 CTGGAAATCTAGGAGTGGAATAGCCGGGCCCTGG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170399164 34 + 172585720 CTGGAAATCTAGGAGTAGCATAGCTGGGCCACAG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169142447 34 - 170955103 CTGGAAATCTAGGAGTAGCATAGCTGGGCCACAG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8428826 34 + 10161646 CTGGAAATCTAGGAGTAGCATAGCTGGGCCACAG i macNem1.NW_012011000v1 C 0 C 0 s manLeu1.NW_012106474v1 8306736 34 - 10857215 CTAGAAATCTAGGAGTGGAATAGCTGGGCCACGG i manLeu1.NW_012106474v1 C 0 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e saiBol1.JH378287 1352667 1156 - 2905041 I e aotNan1.NW_018494782v1 1564318 0 - 1813869 C e cebCap1.NW_016107695v1 1317878 1305 - 2164891 I e calJac3.chr4 169953685 1186 + 171630274 I e dasNov3.JH569188 651076 2870 + 760995 I e colAng1.NW_012114488v1 15670022 0 - 23502949 C e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C e cerAty1.NW_012002071v1 1459154 0 + 3144229 C a score=35856.000000 s hg38.chr6_KB021644v2_alt 165488 12 + 185823 AGCCACAGGAAC s panTro5.chr6 173628422 12 + 175400573 AGCCACGGGAAC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171855458 12 + 173848474 AGCCACGGGAAT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11538360 12 - 12463322 AGCCACGGGAAT i gorGor5.CYUI01015032v1 T 98 C 0 s nomLeu3.chr3 156370843 12 + 157873769 AGCCACAGGAAC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170399198 12 + 172585720 AGCCACAGGAAC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169142481 12 - 170955103 AGCCACAGGAAC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8428860 12 + 10161646 AGCCACAGGAAC i macNem1.NW_012011000v1 C 0 C 0 s manLeu1.NW_012106474v1 8306770 12 - 10857215 AGACACAGGAAC i manLeu1.NW_012106474v1 C 0 T 49 e otoGar3.GL873575 10988881 3627 - 12073884 I e saiBol1.JH378287 1352667 1156 - 2905041 I e aotNan1.NW_018494782v1 1564318 0 - 1813869 C e cebCap1.NW_016107695v1 1317878 1305 - 2164891 I e calJac3.chr4 169953685 1186 + 171630274 I e dasNov3.JH569188 651076 2870 + 760995 I e colAng1.NW_012114488v1 15670022 0 - 23502949 C e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C e cerAty1.NW_012002071v1 1459154 0 + 3144229 C a score=75941.000000 s hg38.chr6_KB021644v2_alt 165500 28 + 185823 ACACTGGAAATCTAGGAGTGGAATAGCT s panTro5.chr6 173628434 28 + 175400573 TCGCTGGAAATCTAGGAGTGGAATATTT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171855470 28 + 173848474 GCACTGGAAATCTAGGAGTGGAATATTT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11538372 28 - 12463322 ACACTGGAAATCTAGGAGTGGAATATTT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156370855 27 + 157873769 -CACTGGAAATCTAGGAGTGGAATAGCT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170399210 28 + 172585720 AAGCTGGAAATCTAGGAGTGGAATAACT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169142493 28 - 170955103 AAGCTGGAAATCTAGGAGTGGAATAACT i macFas5.chr4 C 0 T 98 s macNem1.NW_012011000v1 8428872 28 + 10161646 AAGCTGGAAATCTAGGAGTGGAGTAACT i macNem1.NW_012011000v1 C 0 C 0 s manLeu1.NW_012106474v1 8306733 28 - 10857215 ATGCTAGAAATCTAGGAGTGGAATAGCT i manLeu1.NW_012106474v1 T 49 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e saiBol1.JH378287 1352667 1156 - 2905041 I e aotNan1.NW_018494782v1 1564318 0 - 1813869 C e cebCap1.NW_016107695v1 1317878 1305 - 2164891 I e calJac3.chr4 169953685 1186 + 171630274 I e dasNov3.JH569188 651076 2870 + 760995 I e colAng1.NW_012114488v1 15670022 0 - 23502949 C e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C e cerAty1.NW_012002071v1 1459154 0 + 3144229 C a score=27018.000000 s hg38.chr6_KB021644v2_alt 165528 9 + 185823 GGGCCCCGG s panTro5.chr6 173628462 9 + 175400573 GGGCCCCGG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171855498 9 + 173848474 GGGCCCCAG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11538400 9 - 12463322 GGGCCCCGG i gorGor5.CYUI01015032v1 C 0 T 49 s nomLeu3.chr3 156370882 9 + 157873769 GGGCCCCGG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170399238 9 + 172585720 GGGCCACGG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169142423 9 - 170955103 GGGCCACGG i macFas5.chr4 T 98 C 0 s macNem1.NW_012011000v1 8428900 9 + 10161646 GGGCCACGG i macNem1.NW_012011000v1 C 0 C 0 s manLeu1.NW_012106474v1 8306761 9 - 10857215 GGGCCACGG i manLeu1.NW_012106474v1 C 0 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e saiBol1.JH378287 1352667 1156 - 2905041 I e aotNan1.NW_018494782v1 1564318 0 - 1813869 C e cebCap1.NW_016107695v1 1317878 1305 - 2164891 I e calJac3.chr4 169953685 1186 + 171630274 I e dasNov3.JH569188 651076 2870 + 760995 I e colAng1.NW_012114488v1 15670022 0 - 23502949 C e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C e cerAty1.NW_012002071v1 1459154 0 + 3144229 C a score=32278.000000 s hg38.chr6_KB021644v2_alt 165537 12 + 185823 AGCCACGGGAAC s panTro5.chr6 173628471 12 + 175400573 AGCCACGGGAAC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171855507 12 + 173848474 AGCCACGGGAAC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11538360 12 - 12463322 AGCCACGGGAAT i gorGor5.CYUI01015032v1 T 49 C 0 s nomLeu3.chr3 156370891 12 + 157873769 AGCCACAGGACC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170399247 12 + 172585720 AGCCACAGGAAC i rheMac8.chr4 C 0 T 98 s macFas5.chr4 169142432 12 - 170955103 AGTCACAGGAAA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8428909 12 + 10161646 AGCCACAGGAAC i macNem1.NW_012011000v1 C 0 T 98 s manLeu1.NW_012106474v1 8306770 12 - 10857215 AGACACAGGAAC i manLeu1.NW_012106474v1 C 0 T 49 e otoGar3.GL873575 10988881 3627 - 12073884 I e saiBol1.JH378287 1352667 1156 - 2905041 I e aotNan1.NW_018494782v1 1564318 0 - 1813869 C e cebCap1.NW_016107695v1 1317878 1305 - 2164891 I e calJac3.chr4 169953685 1186 + 171630274 I e dasNov3.JH569188 651076 2870 + 760995 I e colAng1.NW_012114488v1 15670022 0 - 23502949 C e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C e cerAty1.NW_012002071v1 1459154 0 + 3144229 C a score=99354.000000 s hg38.chr6_KB021644v2_alt 165549 37 + 185823 GCACTGGAAATCTAGGAGTGGAATAGCTGGGCCCCGG s panTro5.chr6 173628483 37 + 175400573 GCGCTGGAAATCTAGGAGGGGAATATTTGGGCCCCGG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171855519 37 + 173848474 GCACTGGAAATCTAGGAGTGGAATAGCCGGGTCCCGG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11538372 37 - 12463322 ACACTGGAAATCTAGGAGTGGAATATTTGGGCCCCGG i gorGor5.CYUI01015032v1 C 0 T 49 s nomLeu3.chr3 156370903 36 + 157873769 -CACTGGAAATCTAGGAGTGGAATAGCCGGGCCGCGG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170399161 37 + 172585720 GCACTGGAAATCTAGGAGTAGCATAGCTGGGCCACAG i rheMac8.chr4 T 98 C 0 s macFas5.chr4 169142444 37 - 170955103 GCACTGGAAATCTAGGAGTAGCATAGCTGGGCCACAG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8428823 37 + 10161646 GCACTGGAAATCTAGGAGTAGCATAGCTGGGCCACAG i macNem1.NW_012011000v1 T 98 C 0 s manLeu1.NW_012106474v1 8306733 37 - 10857215 ATGCTAGAAATCTAGGAGTGGAATAGCTGGGCCACGG i manLeu1.NW_012106474v1 T 49 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e saiBol1.JH378287 1352667 1156 - 2905041 I e aotNan1.NW_018494782v1 1564318 0 - 1813869 C e cebCap1.NW_016107695v1 1317878 1305 - 2164891 I e calJac3.chr4 169953685 1186 + 171630274 I e dasNov3.JH569188 651076 2870 + 760995 I e colAng1.NW_012114488v1 15670022 0 - 23502949 C e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C e cerAty1.NW_012002071v1 1459154 0 + 3144229 C a score=36434.000000 s hg38.chr6_KB021644v2_alt 165586 12 + 185823 AGCCACGGGAAC s panTro5.chr6 173628520 12 + 175400573 AGCCACGGGAAC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171855556 12 + 173848474 AGCCACAGGAAC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11538360 12 - 12463322 AGCCACGGGAAT i gorGor5.CYUI01015032v1 T 49 C 0 s nomLeu3.chr3 156370939 12 + 157873769 AGCCACGGGAAC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170399198 12 + 172585720 AGCCACAGGAAC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169142481 12 - 170955103 AGCCACAGGAAC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8428860 12 + 10161646 AGCCACAGGAAC i macNem1.NW_012011000v1 C 0 C 0 s manLeu1.NW_012106474v1 8306770 12 - 10857215 AGACACAGGAAC i manLeu1.NW_012106474v1 C 0 T 123 e otoGar3.GL873575 10988881 3627 - 12073884 I e saiBol1.JH378287 1352667 1156 - 2905041 I e aotNan1.NW_018494782v1 1564318 0 - 1813869 C e cebCap1.NW_016107695v1 1317878 1305 - 2164891 I e calJac3.chr4 169953685 1186 + 171630274 I e dasNov3.JH569188 651076 2870 + 760995 I e colAng1.NW_012114488v1 15670022 0 - 23502949 C e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C e cerAty1.NW_012002071v1 1459154 0 + 3144229 C a score=107292.000000 s hg38.chr6_KB021644v2_alt 165598 49 + 185823 GCACTGGAAATCTAGGAGTGGAATATTTGGGCCCCGGAGCCACGGGAAC s panTro5.chr6 173628532 49 + 175400573 GCGCTGGAAATCTAGGAGGGGAATATTTGGGCCCCGGAGCCACGGGAAC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171855568 49 + 173848474 GCACTGGAAATCTAGGAGTGGAATATTTGGGCCCCAGAGCCACAGGAAC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11538372 49 - 12463322 ACACTGGAAATCTAGGAGTGGAATATTTGGGCCCCGGAGCCACGGGAAC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156370951 49 + 157873769 ACACTGGAAGTCTAGGAGTGGAATAGCCGGGCCGCGGAGCCACAGGAAC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170399210 49 + 172585720 AAGCTGGAAATCTAGGAGTGGAATAACTGGGCCACGGAGCCACAGGAAC i rheMac8.chr4 C 0 T 49 s macFas5.chr4 169142493 49 - 170955103 AAGCTGGAAATCTAGGAGTGGAATAACTGGGCCATGGAGCCACAGGAAC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8428872 49 + 10161646 AAGCTGGAAATCTAGGAGTGGAGTAACTGGGCCACGGAGCCACAGGAAC i macNem1.NW_012011000v1 C 0 T 47 e otoGar3.GL873575 10988881 3627 - 12073884 I e saiBol1.JH378287 1352667 1156 - 2905041 I e aotNan1.NW_018494782v1 1564318 0 - 1813869 C e cebCap1.NW_016107695v1 1317878 1305 - 2164891 I e calJac3.chr4 169953685 1186 + 171630274 I e dasNov3.JH569188 651076 2870 + 760995 I e colAng1.NW_012114488v1 15670022 0 - 23502949 C e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C e cerAty1.NW_012002071v1 1459154 0 + 3144229 C e manLeu1.NW_012106474v1 8306782 123 - 10857215 T a score=-3508.000000 s hg38.chr6_KB021644v2_alt 165647 4 + 185823 --GCAC s panTro5.chr6 173628581 4 + 175400573 --ACGC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171855617 4 + 173848474 --GCAC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11538421 4 - 12463322 --GCAC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156371000 4 + 157873769 --GTAC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170399210 4 + 172585720 AAGC-- i rheMac8.chr4 T 49 C 0 s macFas5.chr4 169142542 2 - 170955103 --TC-- i macFas5.chr4 C 0 T 47 s macNem1.NW_012011000v1 8428874 2 + 10161646 --GC-- i macNem1.NW_012011000v1 T 47 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e saiBol1.JH378287 1352667 1156 - 2905041 I e aotNan1.NW_018494782v1 1564318 0 - 1813869 C e cebCap1.NW_016107695v1 1317878 1305 - 2164891 I e calJac3.chr4 169953685 1186 + 171630274 I e dasNov3.JH569188 651076 2870 + 760995 I e colAng1.NW_012114488v1 15670022 0 - 23502949 C e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C e cerAty1.NW_012002071v1 1459154 0 + 3144229 C e manLeu1.NW_012106474v1 8306782 123 - 10857215 T a score=95314.000000 s hg38.chr6_KB021644v2_alt 165651 43 + 185823 TGGAAATCTAGGAGTGGAATATTTGGGCCCCGGAGCCACGGGA s panTro5.chr6 173628585 43 + 175400573 TGGAAATCTAGGAGTGGAATATTTGGGCCCCGGAACCACGGGA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171855621 43 + 173848474 TGGAAATCTAGGAGTGGAATATTTGCATCCCGGAGACACAGGA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11538425 43 - 12463322 TGGAAATCTAGGAGTGGAATATTTGGGCCCCGGAGCCACGGGA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156371004 43 + 157873769 TGGAAATCTAGGAGTGGAATAGCCGGGCCATGGAGCCACAGGA i nomLeu3.chr3 C 0 I 2 s rheMac8.chr4 170399214 43 + 172585720 TGGAAATCTAGGAGTGGAATAACTGGGCCACGGAGCCACAGGA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169142497 43 - 170955103 TGGAAATCTAGGAGTGGAATAACTGGGCCATGGAGCCACAGGA i macFas5.chr4 T 47 C 0 s macNem1.NW_012011000v1 8428876 43 + 10161646 TGGAAATCTAGGAGTGGAGTAACTGGGCCACGGAGCCACAGGA i macNem1.NW_012011000v1 C 0 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e saiBol1.JH378287 1352667 1156 - 2905041 I e aotNan1.NW_018494782v1 1564318 0 - 1813869 C e cebCap1.NW_016107695v1 1317878 1305 - 2164891 I e calJac3.chr4 169953685 1186 + 171630274 I e dasNov3.JH569188 651076 2870 + 760995 I e colAng1.NW_012114488v1 15670022 0 - 23502949 C e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C e cerAty1.NW_012002071v1 1459154 0 + 3144229 C e manLeu1.NW_012106474v1 8306782 123 - 10857215 T a score=3225.000000 s hg38.chr6_KB021644v2_alt 165694 2 + 185823 AC s panTro5.chr6 173628628 2 + 175400573 AC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171855664 2 + 173848474 AT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11538468 2 - 12463322 AC i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170399257 2 + 172585720 AC i rheMac8.chr4 C 0 T 49 s macFas5.chr4 169142540 2 - 170955103 AC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8428919 2 + 10161646 AC i macNem1.NW_012011000v1 C 0 T 47 e otoGar3.GL873575 10988881 3627 - 12073884 I e saiBol1.JH378287 1352667 1156 - 2905041 I e aotNan1.NW_018494782v1 1564318 0 - 1813869 C e cebCap1.NW_016107695v1 1317878 1305 - 2164891 I e calJac3.chr4 169953685 1186 + 171630274 I e dasNov3.JH569188 651076 2870 + 760995 I e colAng1.NW_012114488v1 15670022 0 - 23502949 C e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C e cerAty1.NW_012002071v1 1459154 0 + 3144229 C e nomLeu3.chr3 156371047 2 + 157873769 I e manLeu1.NW_012106474v1 8306782 123 - 10857215 T a score=205.000000 s hg38.chr6_KB021644v2_alt 165696 1 + 185823 G s panTro5.chr6 173628630 1 + 175400573 A i panTro5.chr6 C 0 C 0 s panPan2.chr6 171855666 1 + 173848474 G i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11538470 1 - 12463322 G i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170399210 1 + 172585720 A i rheMac8.chr4 T 49 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e saiBol1.JH378287 1352667 1156 - 2905041 I e aotNan1.NW_018494782v1 1564318 0 - 1813869 C e cebCap1.NW_016107695v1 1317878 1305 - 2164891 I e calJac3.chr4 169953685 1186 + 171630274 I e dasNov3.JH569188 651076 2870 + 760995 I e colAng1.NW_012114488v1 15670022 0 - 23502949 C e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C e cerAty1.NW_012002071v1 1459154 0 + 3144229 C e nomLeu3.chr3 156371047 2 + 157873769 I e manLeu1.NW_012106474v1 8306782 123 - 10857215 T e macNem1.NW_012011000v1 8428921 47 + 10161646 T e macFas5.chr4 169142542 0 - 170955103 C a score=-6978.000000 s hg38.chr6_KB021644v2_alt 165697 3 + 185823 --CAC s panTro5.chr6 173628631 3 + 175400573 --CAC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171855667 3 + 173848474 --CAC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11538471 3 - 12463322 --CAC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156371049 3 + 157873769 --CAC i nomLeu3.chr3 I 2 C 0 s rheMac8.chr4 170399211 3 + 172585720 AGC-- i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169142542 2 - 170955103 -TC-- i macFas5.chr4 C 0 T 47 s macNem1.NW_012011000v1 8428874 2 + 10161646 -GC-- i macNem1.NW_012011000v1 T 47 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e saiBol1.JH378287 1352667 1156 - 2905041 I e aotNan1.NW_018494782v1 1564318 0 - 1813869 C e cebCap1.NW_016107695v1 1317878 1305 - 2164891 I e calJac3.chr4 169953685 1186 + 171630274 I e dasNov3.JH569188 651076 2870 + 760995 I e colAng1.NW_012114488v1 15670022 0 - 23502949 C e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C e cerAty1.NW_012002071v1 1459154 0 + 3144229 C e manLeu1.NW_012106474v1 8306782 123 - 10857215 T a score=88775.000000 s hg38.chr6_KB021644v2_alt 165700 39 + 185823 TGGAAATCTAGGAGTGGAATATTTGGGCCCCGGAGCCAC s panTro5.chr6 173628634 39 + 175400573 TGGAAATCTAGGAGAGGAATATTTGGGCCCCGGAGCCAC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171855670 39 + 173848474 TGGAAATCTAGGAGGGGAATATTTGGGCCCCGGAGCCAC i panPan2.chr6 C 0 T 98 s gorGor5.CYUI01015032v1 11538474 39 - 12463322 TGGAAATCTAGGAGTGGAATATTTGGGCCCCGGAGACAC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156371052 39 + 157873769 TGGAAATCTAGGAGTGGAATAGCCGGGCCACGGAGCCAC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170399214 39 + 172585720 TGGAAATCTAGGAGTGGAATAACTGGGCCACGGAGCCAC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169142497 39 - 170955103 TGGAAATCTAGGAGTGGAATAACTGGGCCATGGAGCCAC i macFas5.chr4 T 47 C 0 s macNem1.NW_012011000v1 8428876 39 + 10161646 TGGAAATCTAGGAGTGGAGTAACTGGGCCACGGAGCCAC i macNem1.NW_012011000v1 C 0 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e saiBol1.JH378287 1352667 1156 - 2905041 I e aotNan1.NW_018494782v1 1564318 0 - 1813869 C e cebCap1.NW_016107695v1 1317878 1305 - 2164891 I e calJac3.chr4 169953685 1186 + 171630274 I e dasNov3.JH569188 651076 2870 + 760995 I e colAng1.NW_012114488v1 15670022 0 - 23502949 C e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C e cerAty1.NW_012002071v1 1459154 0 + 3144229 C e manLeu1.NW_012106474v1 8306782 123 - 10857215 T a score=7794.000000 s hg38.chr6_KB021644v2_alt 165739 5 + 185823 GGGAA s panTro5.chr6 173628673 5 + 175400573 GGGAA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171855611 5 + 173848474 AGGAA i panPan2.chr6 T 98 C 0 s gorGor5.CYUI01015032v1 11538513 5 - 12463322 GGGAA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156371091 4 + 157873769 AGGA- i nomLeu3.chr3 C 0 T 48 s rheMac8.chr4 170399253 5 + 172585720 AGGAA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169142536 5 - 170955103 AGGAA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8428915 5 + 10161646 AGGAA i macNem1.NW_012011000v1 C 0 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e saiBol1.JH378287 1352667 1156 - 2905041 I e aotNan1.NW_018494782v1 1564318 0 - 1813869 C e cebCap1.NW_016107695v1 1317878 1305 - 2164891 I e calJac3.chr4 169953685 1186 + 171630274 I e dasNov3.JH569188 651076 2870 + 760995 I e colAng1.NW_012114488v1 15670022 0 - 23502949 C e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C e cerAty1.NW_012002071v1 1459154 0 + 3144229 C e manLeu1.NW_012106474v1 8306782 123 - 10857215 T a score=9659.000000 s hg38.chr6_KB021644v2_alt 165744 5 + 185823 CCCAC s panTro5.chr6 173628678 5 + 175400573 CGCAC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171855616 5 + 173848474 CGCAC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11538518 5 - 12463322 CGCAC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156371047 5 + 157873769 CCCAC i nomLeu3.chr3 T 48 C 0 s rheMac8.chr4 170399258 5 + 172585720 CTCAC i rheMac8.chr4 C 0 T 196 s macFas5.chr4 169142541 5 - 170955103 CTCAC i macFas5.chr4 C 0 T 196 s macNem1.NW_012011000v1 8428920 5 + 10161646 CTCAC i macNem1.NW_012011000v1 C 0 T 196 e otoGar3.GL873575 10988881 3627 - 12073884 I e saiBol1.JH378287 1352667 1156 - 2905041 I e aotNan1.NW_018494782v1 1564318 0 - 1813869 C e cebCap1.NW_016107695v1 1317878 1305 - 2164891 I e calJac3.chr4 169953685 1186 + 171630274 I e dasNov3.JH569188 651076 2870 + 760995 I e colAng1.NW_012114488v1 15670022 0 - 23502949 C e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C e cerAty1.NW_012002071v1 1459154 0 + 3144229 C e manLeu1.NW_012106474v1 8306782 123 - 10857215 T a score=92891.000000 s hg38.chr6_KB021644v2_alt 165749 43 + 185823 TGGAAATCTAGGAGTGGAATAGCCAGGCCCTGGAGCCACGGGA s panTro5.chr6 173628683 43 + 175400573 TGGAAATCTAGGAGTGGAATAGCCAGGCCCCGGAGCCACAGGA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171855621 43 + 173848474 TGGAAATCTAGGAGTGGAATATTTGCATCCCGGAGACACAGGA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11538523 43 - 12463322 TGGAAATCTAGGAGTGGAATATTTGGGCCCCGGAGCCACGGGA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156371052 43 + 157873769 TGGAAATCTAGGAGTGGAATAGCCGGGCCACGGAGCCACAGGA i nomLeu3.chr3 C 0 T 146 s rheMac8.chr4 170399067 43 + 172585720 tggaaatctaggagtggcatagctgggccacggagtCACAGGA i rheMac8.chr4 T 196 C 0 s macFas5.chr4 169142350 43 - 170955103 tggaaatctaggagtggcatagctgggccacggagtCACAGGA i macFas5.chr4 T 196 C 0 s macNem1.NW_012011000v1 8428729 43 + 10161646 tggaaatctaggagtggcatagctgggccacggagtCACAGGA i macNem1.NW_012011000v1 T 196 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e saiBol1.JH378287 1352667 1156 - 2905041 I e aotNan1.NW_018494782v1 1564318 0 - 1813869 C e cebCap1.NW_016107695v1 1317878 1305 - 2164891 I e calJac3.chr4 169953685 1186 + 171630274 I e dasNov3.JH569188 651076 2870 + 760995 I e colAng1.NW_012114488v1 15670022 0 - 23502949 C e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C e cerAty1.NW_012002071v1 1459154 0 + 3144229 C e manLeu1.NW_012106474v1 8306782 123 - 10857215 T a score=5281.000000 s hg38.chr6_KB021644v2_alt 165792 4 + 185823 ATGC s panTro5.chr6 173628726 4 + 175400573 ACAC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171855664 4 + 173848474 ATGC i panPan2.chr6 C 0 T 245 s gorGor5.CYUI01015032v1 11538566 4 - 12463322 ACGC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156370949 4 + 157873769 ACAC i nomLeu3.chr3 T 146 C 0 s rheMac8.chr4 170399110 4 + 172585720 AAGC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169142393 4 - 170955103 AAGC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8428772 4 + 10161646 AAGC i macNem1.NW_012011000v1 C 0 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e saiBol1.JH378287 1352667 1156 - 2905041 I e aotNan1.NW_018494782v1 1564318 0 - 1813869 C e cebCap1.NW_016107695v1 1317878 1305 - 2164891 I e calJac3.chr4 169953685 1186 + 171630274 I e dasNov3.JH569188 651076 2870 + 760995 I e colAng1.NW_012114488v1 15670022 0 - 23502949 C e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C e cerAty1.NW_012002071v1 1459154 0 + 3144229 C e manLeu1.NW_012106474v1 8306782 123 - 10857215 T a score=56644.000000 s hg38.chr6_KB021644v2_alt 165796 26 + 185823 ACTGGAAATCTAGGAGTGGAATATTT s panTro5.chr6 173628730 26 + 175400573 ACTGGAAATCTAGGAGTGGAATATTT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171855423 26 + 173848474 ACTGGAAATCTAGGAGTGGAATATTT i panPan2.chr6 T 245 C 0 s gorGor5.CYUI01015032v1 11538570 26 - 12463322 ACTGGAAATCTAGGAGTGGAATATTT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156370953 26 + 157873769 ACTGGAAGTCTAGGAGTGGAATAGCC i nomLeu3.chr3 C 0 I 116 s rheMac8.chr4 170399114 26 + 172585720 ACTGGAAATCTAGGAGTAGCATAGCT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169142397 26 - 170955103 ACTGGAAATCTAGGAGTAGCATAGCT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8428776 26 + 10161646 ACTGGAAATCTAGGAGTAGCATAGCT i macNem1.NW_012011000v1 C 0 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e saiBol1.JH378287 1352667 1156 - 2905041 I e aotNan1.NW_018494782v1 1564318 0 - 1813869 C e cebCap1.NW_016107695v1 1317878 1305 - 2164891 I e calJac3.chr4 169953685 1186 + 171630274 I e dasNov3.JH569188 651076 2870 + 760995 I e colAng1.NW_012114488v1 15670022 0 - 23502949 C e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C e cerAty1.NW_012002071v1 1459154 0 + 3144229 C e manLeu1.NW_012106474v1 8306782 123 - 10857215 T a score=32934.000000 s hg38.chr6_KB021644v2_alt 165822 20 + 185823 GGGCCCCGGAGCCACGGGAA s panTro5.chr6 173628756 20 + 175400573 GGGCCCCAGAGACACAGGAA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171855449 20 + 173848474 GGGCCCTGGAGCCACGGGAA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11538596 20 - 12463322 GGGCCCCGGAGCCACGGGAA i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170399140 20 + 172585720 GGGCCACGGAGTCACAGGAA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169142423 20 - 170955103 GGGCCACGGAGTCACAGGAA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8428802 20 + 10161646 GGGCCACGGAGTCACAGGAA i macNem1.NW_012011000v1 C 0 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e saiBol1.JH378287 1352667 1156 - 2905041 I e aotNan1.NW_018494782v1 1564318 0 - 1813869 C e cebCap1.NW_016107695v1 1317878 1305 - 2164891 I e calJac3.chr4 169953685 1186 + 171630274 I e dasNov3.JH569188 651076 2870 + 760995 I e colAng1.NW_012114488v1 15670022 0 - 23502949 C e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C e cerAty1.NW_012002071v1 1459154 0 + 3144229 C e nomLeu3.chr3 156370979 116 + 157873769 I e manLeu1.NW_012106474v1 8306782 123 - 10857215 T a score=-6151.000000 s hg38.chr6_KB021644v2_alt 165842 1 + 185823 -C s panTro5.chr6 173628776 1 + 175400573 -C i panTro5.chr6 C 0 T 98 s panPan2.chr6 171855469 1 + 173848474 -T i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11538616 1 - 12463322 -C i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156371095 1 + 157873769 -C i nomLeu3.chr3 I 116 C 0 s rheMac8.chr4 170399160 1 + 172585720 A- i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169142443 1 - 170955103 A- i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8428822 1 + 10161646 A- i macNem1.NW_012011000v1 C 0 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e saiBol1.JH378287 1352667 1156 - 2905041 I e aotNan1.NW_018494782v1 1564318 0 - 1813869 C e cebCap1.NW_016107695v1 1317878 1305 - 2164891 I e calJac3.chr4 169953685 1186 + 171630274 I e dasNov3.JH569188 651076 2870 + 760995 I e colAng1.NW_012114488v1 15670022 0 - 23502949 C e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C e cerAty1.NW_012002071v1 1459154 0 + 3144229 C e manLeu1.NW_012106474v1 8306782 123 - 10857215 T a score=2900.000000 s hg38.chr6_KB021644v2_alt 165843 2 + 185823 CC s panTro5.chr6 173628679 2 + 175400573 GC i panTro5.chr6 T 98 C 0 s panPan2.chr6 171855470 2 + 173848474 GC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11538617 2 - 12463322 GC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156371096 2 + 157873769 CC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170399161 2 + 172585720 GC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169142444 2 - 170955103 GC i macFas5.chr4 C 0 T 98 s macNem1.NW_012011000v1 8428823 2 + 10161646 GC i macNem1.NW_012011000v1 C 0 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e saiBol1.JH378287 1352667 1156 - 2905041 I e aotNan1.NW_018494782v1 1564318 0 - 1813869 C e cebCap1.NW_016107695v1 1317878 1305 - 2164891 I e calJac3.chr4 169953685 1186 + 171630274 I e dasNov3.JH569188 651076 2870 + 760995 I e colAng1.NW_012114488v1 15670022 0 - 23502949 C e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C e cerAty1.NW_012002071v1 1459154 0 + 3144229 C e manLeu1.NW_012106474v1 8306782 123 - 10857215 T a score=104342.000000 s hg38.chr6_KB021644v2_alt 165845 49 + 185823 ACTGGAAATCTAGGAGTGGAATAGCCAGGCCCTGGAGCCACGGGAACAC s panTro5.chr6 173628681 49 + 175400573 ACTGGAAATCTAGGAGTGGAATAGCCAGGCCCCGGAGCCACAGGAACAC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171855472 49 + 173848474 ACTGGAAATCTAGGAGTGGAATATTTGGGCCCCAGAGCCACGGGAACGC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11538619 49 - 12463322 ACTGGAAATCTAGGAGTGGAATATTTGGGCCCCGGAGCCACGGGAACGC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156371098 49 + 157873769 ACTGGAAATCTAGGAGTGGAATAGCCGGGCCGCGGAGCCACAGGAACAC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170399163 49 + 172585720 ACTGGAAATCTAGGAGTAGCATAGCTGGGCCACAGAGCCACAGGAACAA i rheMac8.chr4 C 0 T 147 s macFas5.chr4 169142348 49 - 170955103 actggaaatctaggagtggcatagctgggccacggagtCACAGGAAAGC i macFas5.chr4 T 98 T 49 s macNem1.NW_012011000v1 8428825 49 + 10161646 ACTGGAAATCTAGGAGTAGCATAGCTGGGCCACAGAGCCACAGGAACAA i macNem1.NW_012011000v1 C 0 T 147 e otoGar3.GL873575 10988881 3627 - 12073884 I e saiBol1.JH378287 1352667 1156 - 2905041 I e aotNan1.NW_018494782v1 1564318 0 - 1813869 C e cebCap1.NW_016107695v1 1317878 1305 - 2164891 I e calJac3.chr4 169953685 1186 + 171630274 I e dasNov3.JH569188 651076 2870 + 760995 I e colAng1.NW_012114488v1 15670022 0 - 23502949 C e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C e cerAty1.NW_012002071v1 1459154 0 + 3144229 C e manLeu1.NW_012106474v1 8306782 123 - 10857215 T a score=41915.000000 s hg38.chr6_KB021644v2_alt 165894 35 + 185823 ACTGGAAATCTAGGAGTGGAATAGCCGGGCCCCGG s panTro5.chr6 173628730 35 + 175400573 ACTGGAAATCTAGGAGTGGAATATTTGGGCCCCAG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171855521 35 + 173848474 ACTGGAAATCTAGGAGTGGAATAGCCGGGTCCCGG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11538668 35 - 12463322 ACTGGAAATCTAGGAGTGGAATATTTGGGCCCCGG i gorGor5.CYUI01015032v1 C 0 T 343 s nomLeu3.chr3 156371147 35 + 157873769 ACTGGAAATCTAGGAGTGGAATAGCCGGGCCATGG i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169142348 35 - 170955103 actggaaatctaggagtggcatagctgggccacgg i macFas5.chr4 T 49 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e saiBol1.JH378287 1352667 1156 - 2905041 I e aotNan1.NW_018494782v1 1564318 0 - 1813869 C e cebCap1.NW_016107695v1 1317878 1305 - 2164891 I e calJac3.chr4 169953685 1186 + 171630274 I e dasNov3.JH569188 651076 2870 + 760995 I e colAng1.NW_012114488v1 15670022 0 - 23502949 C e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C e cerAty1.NW_012002071v1 1459154 0 + 3144229 C e manLeu1.NW_012106474v1 8306782 123 - 10857215 T e macNem1.NW_012011000v1 8428874 147 + 10161646 T e rheMac8.chr4 170399212 147 + 172585720 T a score=13152.000000 s hg38.chr6_KB021644v2_alt 165929 12 + 185823 AGCCACGGGAAC s panTro5.chr6 173628765 12 + 175400573 AGACACAGGAAC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171855556 12 + 173848474 AGCCACAGGAAC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11538360 12 - 12463322 AGCCACGGGAAT i gorGor5.CYUI01015032v1 T 343 C 0 s nomLeu3.chr3 156371182 12 + 157873769 AGCCACAGGAAC i nomLeu3.chr3 C 0 I 48 s macFas5.chr4 169142383 12 - 170955103 agtCACAGGAAA i macFas5.chr4 C 0 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e saiBol1.JH378287 1352667 1156 - 2905041 I e aotNan1.NW_018494782v1 1564318 0 - 1813869 C e cebCap1.NW_016107695v1 1317878 1305 - 2164891 I e calJac3.chr4 169953685 1186 + 171630274 I e dasNov3.JH569188 651076 2870 + 760995 I e colAng1.NW_012114488v1 15670022 0 - 23502949 C e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C e cerAty1.NW_012002071v1 1459154 0 + 3144229 C e manLeu1.NW_012106474v1 8306782 123 - 10857215 T e macNem1.NW_012011000v1 8428874 147 + 10161646 T e rheMac8.chr4 170399212 147 + 172585720 T a score=1985.000000 s hg38.chr6_KB021644v2_alt 165941 3 + 185823 GCT s panTro5.chr6 173628777 3 + 175400573 GCA i panTro5.chr6 C 0 T 490 s panPan2.chr6 171855568 3 + 173848474 GCA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11538372 3 - 12463322 ACA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156371242 3 + 157873769 GTA i nomLeu3.chr3 I 48 C 0 s macFas5.chr4 169142395 3 - 170955103 GCA i macFas5.chr4 C 0 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e saiBol1.JH378287 1352667 1156 - 2905041 I e aotNan1.NW_018494782v1 1564318 0 - 1813869 C e cebCap1.NW_016107695v1 1317878 1305 - 2164891 I e calJac3.chr4 169953685 1186 + 171630274 I e dasNov3.JH569188 651076 2870 + 760995 I e colAng1.NW_012114488v1 15670022 0 - 23502949 C e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C e cerAty1.NW_012002071v1 1459154 0 + 3144229 C e manLeu1.NW_012106474v1 8306782 123 - 10857215 T e macNem1.NW_012011000v1 8428874 147 + 10161646 T e rheMac8.chr4 170399212 147 + 172585720 T a score=50851.000000 s hg38.chr6_KB021644v2_alt 165944 46 + 185823 CTGGAAATCTAGGAGTGGAATATTTGGGCCCCGGAGCCACGGGAAC s panTro5.chr6 173628290 46 + 175400573 CTGGAAATCTAGGAGTCGAATATTTGGGCCTCGGAGACACAGGAAC i panTro5.chr6 T 490 C 0 s panPan2.chr6 171855571 46 + 173848474 CTGGAAATCTAGGAGTGGAATATTTGGGCCCCAGAGCCACAGGAAC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11538375 46 - 12463322 CTGGAAATCTAGGAGTGGAATATTTGGGCCCCGGAGCCACGGGAAC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156371245 45 + 157873769 CTGGAAATCTAGGAGTGGAATAGCCGGGCCATGGAGCCAC-GGAAC i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169142398 46 - 170955103 CTGGAAATCTAGGAGTAGCATAGCTGGGCCACGGAGTCACAGGAAA i macFas5.chr4 C 0 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e saiBol1.JH378287 1352667 1156 - 2905041 I e aotNan1.NW_018494782v1 1564318 0 - 1813869 C e cebCap1.NW_016107695v1 1317878 1305 - 2164891 I e calJac3.chr4 169953685 1186 + 171630274 I e dasNov3.JH569188 651076 2870 + 760995 I e colAng1.NW_012114488v1 15670022 0 - 23502949 C e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C e cerAty1.NW_012002071v1 1459154 0 + 3144229 C e manLeu1.NW_012106474v1 8306782 123 - 10857215 T e macNem1.NW_012011000v1 8428874 147 + 10161646 T e rheMac8.chr4 170399212 147 + 172585720 T a score=2628.000000 s hg38.chr6_KB021644v2_alt 165990 2 + 185823 GC s panTro5.chr6 173628336 2 + 175400573 AC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171855617 2 + 173848474 GC i panPan2.chr6 C 0 T 196 s gorGor5.CYUI01015032v1 11538421 2 - 12463322 GC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156371290 2 + 157873769 GT i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169142444 2 - 170955103 GC i macFas5.chr4 C 0 T 98 s aotNan1.NW_018494782v1 1564318 2 - 1813869 GC i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e saiBol1.JH378287 1352667 1156 - 2905041 I e cebCap1.NW_016107695v1 1317878 1305 - 2164891 I e calJac3.chr4 169953685 1186 + 171630274 I e dasNov3.JH569188 651076 2870 + 760995 I e colAng1.NW_012114488v1 15670022 0 - 23502949 C e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C e cerAty1.NW_012002071v1 1459154 0 + 3144229 C e manLeu1.NW_012106474v1 8306782 123 - 10857215 T e macNem1.NW_012011000v1 8428874 147 + 10161646 T e rheMac8.chr4 170399212 147 + 172585720 T a score=128274.000000 s hg38.chr6_KB021644v2_alt 165992 48 + 185823 ACTGGAAATCTAGGAGTGGAATATTTGGGCCCCGGAGCCACGGGAACG s panTro5.chr6 173628338 48 + 175400573 ACTGGAAATCTAGGAGTGGAATATTTGGGCCCCAGAGCCACGGGAACG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171855423 48 + 173848474 ACTGGAAATCTAGGAGTGGAATATTTGGGCCCTGGAGCCACGGGAATG i panPan2.chr6 T 196 C 0 s gorGor5.CYUI01015032v1 11538423 48 - 12463322 ACTGGAAATCTAGGAGTGGAATATTTGGGCCCCGGAGCCACGGGAACG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156371292 47 + 157873769 ACTGGAAATCTAGAAGTGGAATAGCCGGGCCATGGAGCCAC-GGAACG i nomLeu3.chr3 C 0 T 145 s rheMac8.chr4 170399065 48 + 172585720 actggaaatctaggagtggcatagctgggccacggagtCACAGGAAAG i rheMac8.chr4 T 147 C 0 s macFas5.chr4 169142348 48 - 170955103 actggaaatctaggagtggcatagctgggccacggagtCACAGGAAAG i macFas5.chr4 T 98 C 0 s macNem1.NW_012011000v1 8428727 48 + 10161646 actggaaatctaggagtggcatagctgggccacggagtCACAGGAAAG i macNem1.NW_012011000v1 T 147 C 0 s aotNan1.NW_018494782v1 1564320 48 - 1813869 ACTGGAAATCTAGGAGTGGAGCCATTGGGCCACGGAGCCATGGGAACG i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e saiBol1.JH378287 1352667 1156 - 2905041 I e cebCap1.NW_016107695v1 1317878 1305 - 2164891 I e calJac3.chr4 169953685 1186 + 171630274 I e dasNov3.JH569188 651076 2870 + 760995 I e colAng1.NW_012114488v1 15670022 0 - 23502949 C e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C e cerAty1.NW_012002071v1 1459154 0 + 3144229 C e manLeu1.NW_012106474v1 8306782 123 - 10857215 T a score=3600.000000 s hg38.chr6_KB021644v2_alt 166040 1 + 185823 C s panTro5.chr6 173628386 1 + 175400573 C i panTro5.chr6 C 0 C 0 s panPan2.chr6 171855471 1 + 173848474 C i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11538471 1 - 12463322 C i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156371194 1 + 157873769 C i nomLeu3.chr3 T 145 C 0 s rheMac8.chr4 170399113 1 + 172585720 C i rheMac8.chr4 C 0 T 49 s macFas5.chr4 169142396 1 - 170955103 C i macFas5.chr4 C 0 T 49 s macNem1.NW_012011000v1 8428775 1 + 10161646 C i macNem1.NW_012011000v1 C 0 T 49 s aotNan1.NW_018494782v1 1564368 1 - 1813869 C i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e saiBol1.JH378287 1352667 1156 - 2905041 I e cebCap1.NW_016107695v1 1317878 1305 - 2164891 I e calJac3.chr4 169953685 1186 + 171630274 I e dasNov3.JH569188 651076 2870 + 760995 I e colAng1.NW_012114488v1 15670022 0 - 23502949 C e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C e cerAty1.NW_012002071v1 1459154 0 + 3144229 C e manLeu1.NW_012106474v1 8306782 123 - 10857215 T a score=6876.000000 s hg38.chr6_KB021644v2_alt 166041 2 + 185823 AC s panTro5.chr6 173628387 2 + 175400573 AC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171855472 2 + 173848474 AC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11538472 2 - 12463322 AC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156371195 2 + 157873769 AC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170399065 2 + 172585720 ac i rheMac8.chr4 T 49 C 0 s macFas5.chr4 169142348 2 - 170955103 ac i macFas5.chr4 T 49 C 0 s macNem1.NW_012011000v1 8428727 2 + 10161646 ac i macNem1.NW_012011000v1 T 49 C 0 s aotNan1.NW_018494782v1 1564369 2 - 1813869 AC i aotNan1.NW_018494782v1 C 0 I 1175 e otoGar3.GL873575 10988881 3627 - 12073884 I e saiBol1.JH378287 1352667 1156 - 2905041 I e cebCap1.NW_016107695v1 1317878 1305 - 2164891 I e calJac3.chr4 169953685 1186 + 171630274 I e dasNov3.JH569188 651076 2870 + 760995 I e colAng1.NW_012114488v1 15670022 0 - 23502949 C e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C e cerAty1.NW_012002071v1 1459154 0 + 3144229 C e manLeu1.NW_012106474v1 8306782 123 - 10857215 T a score=102657.000000 s hg38.chr6_KB021644v2_alt 166043 47 + 185823 TGGAAATCTAGGAGTGGAATATTTGGGCCCCGGAGCCACGGGAACGC s panTro5.chr6 173628389 47 + 175400573 TGGAAATCTAGGAGTGGAATATTTGGGCCCCGGAGCCACGGGAACTC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171855474 47 + 173848474 TGGAAATCTAGGAGTGGAATATTTGGGCCCCAGAGCCACGGGAACGC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11538474 47 - 12463322 TGGAAATCTAGGAGTGGAATATTTGGGCCCCGGAGACACGGGAACGC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156371197 47 + 157873769 TGGAAATCTAGGAGTGGAATAGCTGGGCCGCGGAGCCACAGGAACGT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170399067 47 + 172585720 tggaaatctaggagtggcatagctgggccacggagtCACAGGAAAGC i rheMac8.chr4 C 0 T 49 s macFas5.chr4 169142350 47 - 170955103 tggaaatctaggagtggcatagctgggccacggagtCACAGGAAAGC i macFas5.chr4 C 0 T 49 s macNem1.NW_012011000v1 8428729 47 + 10161646 tggaaatctaggagtggcatagctgggccacggagtCACAGGAAAGC i macNem1.NW_012011000v1 C 0 T 49 e otoGar3.GL873575 10988881 3627 - 12073884 I e saiBol1.JH378287 1352667 1156 - 2905041 I e aotNan1.NW_018494782v1 1564371 1175 - 1813869 I e cebCap1.NW_016107695v1 1317878 1305 - 2164891 I e calJac3.chr4 169953685 1186 + 171630274 I e dasNov3.JH569188 651076 2870 + 760995 I e colAng1.NW_012114488v1 15670022 0 - 23502949 C e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C e cerAty1.NW_012002071v1 1459154 0 + 3144229 C e manLeu1.NW_012106474v1 8306782 123 - 10857215 T a score=105755.000000 s hg38.chr6_KB021644v2_alt 166090 49 + 185823 ACTGGAAATCTAGGAGTGGAATAGCCGGGCCCCGGAGCCACGGGAACGC s panTro5.chr6 173628436 49 + 175400573 GCTGGAAATCTAGGAGTGGAATATTTGGGCCCCGGAGCCACGGGAACGC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171855521 49 + 173848474 ACTGGAAATCTAGGAGTGGAATAGCCGGGTCCCGGAGCCACAGGAACGC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11538521 49 - 12463322 ACTGGAAATCTAGGAGTGGAATATTTGGGCCCCGGAGCCACGGGAACGC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156371244 48 + 157873769 ACTGGAAATCTAGGAGTGGAATAGCCGGGCCATGGAGCCAC-GGAACGT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170399065 49 + 172585720 actggaaatctaggagtggcatagctgggccacggagtCACAGGAAAGC i rheMac8.chr4 T 49 T 49 s macFas5.chr4 169142348 49 - 170955103 actggaaatctaggagtggcatagctgggccacggagtCACAGGAAAGC i macFas5.chr4 T 49 T 49 s macNem1.NW_012011000v1 8428727 49 + 10161646 actggaaatctaggagtggcatagctgggccacggagtCACAGGAAAGC i macNem1.NW_012011000v1 T 49 T 49 e otoGar3.GL873575 10988881 3627 - 12073884 I e saiBol1.JH378287 1352667 1156 - 2905041 I e aotNan1.NW_018494782v1 1564371 1175 - 1813869 I e cebCap1.NW_016107695v1 1317878 1305 - 2164891 I e calJac3.chr4 169953685 1186 + 171630274 I e dasNov3.JH569188 651076 2870 + 760995 I e colAng1.NW_012114488v1 15670022 0 - 23502949 C e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C e cerAty1.NW_012002071v1 1459154 0 + 3144229 C e manLeu1.NW_012106474v1 8306782 123 - 10857215 T a score=107194.000000 s hg38.chr6_KB021644v2_alt 166139 51 + 185823 ACTGGAAATCTAGGAGTGGAATAGCTGGGCCCCGGAGCCACGGGAACGCAA s panTro5.chr6 173628485 51 + 175400573 GCTGGAAATCTAGGAGGGGAATATTTGGGCCCCGGAGCCACGGGAACGCGC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171855570 51 + 173848474 ACTGGAAATCTAGGAGTGGAATATTTGGGCCCCAGAGCCACAGGAACGCAC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11538570 51 - 12463322 ACTGGAAATCTAGGAGTGGAATATTTGGGCCCCGGAGCCACGGGAACGCAC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156371292 50 + 157873769 ACTGGAAATCTAGAAGTGGAATAGCCGGGCCATGGAGCCAC-GGAACGCAC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170399065 51 + 172585720 actggaaatctaggagtggcatagctgggccacggagtCACAGGAAAGCAC i rheMac8.chr4 T 49 T 49 s macFas5.chr4 169142348 51 - 170955103 actggaaatctaggagtggcatagctgggccacggagtCACAGGAAAGCAC i macFas5.chr4 T 49 T 49 s macNem1.NW_012011000v1 8428727 51 + 10161646 actggaaatctaggagtggcatagctgggccacggagtCACAGGAAAGCAC i macNem1.NW_012011000v1 T 49 T 49 e otoGar3.GL873575 10988881 3627 - 12073884 I e saiBol1.JH378287 1352667 1156 - 2905041 I e aotNan1.NW_018494782v1 1564371 1175 - 1813869 I e cebCap1.NW_016107695v1 1317878 1305 - 2164891 I e calJac3.chr4 169953685 1186 + 171630274 I e dasNov3.JH569188 651076 2870 + 760995 I e colAng1.NW_012114488v1 15670022 0 - 23502949 C e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C e cerAty1.NW_012002071v1 1459154 0 + 3144229 C e manLeu1.NW_012106474v1 8306782 123 - 10857215 T a score=48493.000000 s hg38.chr6_KB021644v2_alt 166190 20 + 185823 TGGAAATCTAGGAGTGGAAT s panTro5.chr6 173628536 20 + 175400573 TGGAAATCTAGGAGGGGAAT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171855621 20 + 173848474 TGGAAATCTAGGAGTGGAAT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11538621 20 - 12463322 TGGAAATCTAGGAGTGGAAT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156371342 20 + 157873769 TGGAAATCTAGGAGTGGAAT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170399067 20 + 172585720 tggaaatctaggagtggcat i rheMac8.chr4 T 49 C 0 s macFas5.chr4 169142350 20 - 170955103 tggaaatctaggagtggcat i macFas5.chr4 T 49 C 0 s macNem1.NW_012011000v1 8428729 20 + 10161646 tggaaatctaggagtggcat i macNem1.NW_012011000v1 T 49 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e saiBol1.JH378287 1352667 1156 - 2905041 I e aotNan1.NW_018494782v1 1564371 1175 - 1813869 I e cebCap1.NW_016107695v1 1317878 1305 - 2164891 I e calJac3.chr4 169953685 1186 + 171630274 I e dasNov3.JH569188 651076 2870 + 760995 I e colAng1.NW_012114488v1 15670022 0 - 23502949 C e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C e cerAty1.NW_012002071v1 1459154 0 + 3144229 C e manLeu1.NW_012106474v1 8306782 123 - 10857215 T a score=59755.000000 s hg38.chr6_KB021644v2_alt 166210 27 + 185823 AGCTGGGCCCCGGAGCCACGGGAACGC s panTro5.chr6 173628556 27 + 175400573 ATTTGGGCCCCGGAGCCACGGGAACAC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171855641 27 + 173848474 ATTTGCATCCCGGAGACACAGGAATGC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11538641 27 - 12463322 ATTTGGGCCCCGGAGCCACGGGAACGC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156371362 26 + 157873769 AGCCGGGCCATGGAGCCAC-GGAACAC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170399087 27 + 172585720 agctgggccacggagtCACAGGAAAGC i rheMac8.chr4 C 0 T 49 s macFas5.chr4 169142370 27 - 170955103 agctgggccacggagtCACAGGAAAGC i macFas5.chr4 C 0 T 49 s macNem1.NW_012011000v1 8428749 27 + 10161646 agctgggccacggagtCACAGGAAAGC i macNem1.NW_012011000v1 C 0 T 49 s manLeu1.NW_012106474v1 8306659 27 - 10857215 AGCTGGGCCACGGAGACACAGGAACAT i manLeu1.NW_012106474v1 T 123 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e saiBol1.JH378287 1352667 1156 - 2905041 I e aotNan1.NW_018494782v1 1564371 1175 - 1813869 I e cebCap1.NW_016107695v1 1317878 1305 - 2164891 I e calJac3.chr4 169953685 1186 + 171630274 I e dasNov3.JH569188 651076 2870 + 760995 I e colAng1.NW_012114488v1 15670022 0 - 23502949 C e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C e cerAty1.NW_012002071v1 1459154 0 + 3144229 C a score=66555.000000 s hg38.chr6_KB021644v2_alt 166237 22 + 185823 ACTGGAAATCTAGGAGTGGAAT s panTro5.chr6 173628583 22 + 175400573 GCTGGAAATCTAGGAGTGGAAT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171855668 22 + 173848474 ACTGGAAATCTAGGAGGGGAAT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11538668 22 - 12463322 ACTGGAAATCTAGGAGTGGAAT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156371388 22 + 157873769 ACTGGAAATCTAGGAGTGGAAT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170399065 22 + 172585720 actggaaatctaggagtggcat i rheMac8.chr4 T 49 C 0 s macFas5.chr4 169142348 22 - 170955103 actggaaatctaggagtggcat i macFas5.chr4 T 49 C 0 s macNem1.NW_012011000v1 8428727 22 + 10161646 actggaaatctaggagtggcat i macNem1.NW_012011000v1 T 49 C 0 s manLeu1.NW_012106474v1 8306686 22 - 10857215 GCTAGAAATCTAGGAGTGGCAT i manLeu1.NW_012106474v1 C 0 T 49 e otoGar3.GL873575 10988881 3627 - 12073884 I e saiBol1.JH378287 1352667 1156 - 2905041 I e aotNan1.NW_018494782v1 1564371 1175 - 1813869 I e cebCap1.NW_016107695v1 1317878 1305 - 2164891 I e calJac3.chr4 169953685 1186 + 171630274 I e dasNov3.JH569188 651076 2870 + 760995 I e colAng1.NW_012114488v1 15670022 0 - 23502949 C e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C e cerAty1.NW_012002071v1 1459154 0 + 3144229 C a score=50715.000000 s hg38.chr6_KB021644v2_alt 166259 19 + 185823 AGCTGGGCCCCGGAGCCAC s panTro5.chr6 173628605 19 + 175400573 ATTTGGGCCCCGGAACCAC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171855690 19 + 173848474 ATTTGGGCCCCGGAGCCAC i panPan2.chr6 C 0 T 286 s gorGor5.CYUI01015032v1 11538690 19 - 12463322 ATTTGGGCCCCGGAGCCAC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156371410 19 + 157873769 AGCCGGGCCACGGAGCCAC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170399087 19 + 172585720 agctgggccacggagtCAC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169142370 19 - 170955103 agctgggccacggagtCAC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8428749 19 + 10161646 agctgggccacggagtCAC i macNem1.NW_012011000v1 C 0 C 0 s manLeu1.NW_012106474v1 8306659 19 - 10857215 AGCTGGGCCACGGAGACAC i manLeu1.NW_012106474v1 T 49 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e saiBol1.JH378287 1352667 1156 - 2905041 I e aotNan1.NW_018494782v1 1564371 1175 - 1813869 I e cebCap1.NW_016107695v1 1317878 1305 - 2164891 I e calJac3.chr4 169953685 1186 + 171630274 I e dasNov3.JH569188 651076 2870 + 760995 I e colAng1.NW_012114488v1 15670022 0 - 23502949 C e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C e cerAty1.NW_012002071v1 1459154 0 + 3144229 C a score=7217.000000 s hg38.chr6_KB021644v2_alt 166278 8 + 185823 GGGAACGC s panTro5.chr6 173628624 8 + 175400573 GGGAACAC i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11538709 8 - 12463322 GGGAACGC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156371429 7 + 157873769 CAGAACC- i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170399106 8 + 172585720 AGGAAAGC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169142389 8 - 170955103 AGGAAAGC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8428768 8 + 10161646 AGGAAAGC i macNem1.NW_012011000v1 C 0 C 0 s manLeu1.NW_012106474v1 8306678 8 - 10857215 AGGAACAT i manLeu1.NW_012106474v1 C 0 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e saiBol1.JH378287 1352667 1156 - 2905041 I e aotNan1.NW_018494782v1 1564371 1175 - 1813869 I e cebCap1.NW_016107695v1 1317878 1305 - 2164891 I e calJac3.chr4 169953685 1186 + 171630274 I e dasNov3.JH569188 651076 2870 + 760995 I e colAng1.NW_012114488v1 15670022 0 - 23502949 C e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C e cerAty1.NW_012002071v1 1459154 0 + 3144229 C e panPan2.chr6 171855709 286 + 173848474 T a score=268859.000000 s hg38.chr6_KB021644v2_alt 166286 96 + 185823 ACTGGAAATCTAGGAGTGGAATAGCTGGGCCCCGGAGCCACGGGAACGCACTGGAAATCTAGGAGTGGAATAGCTGGGCCCCGGAGCCACGGGAAC s panTro5.chr6 173628632 96 + 175400573 ACTGGAAATCTAGGAGAGGAATATTTGGGCCCCGGAGCCACGGGAACGCACTGGAAATCTAGGAGTGGAATAGCCAGGCCCCGGAGCCACAGGAAC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171855423 96 + 173848474 ACTGGAAATCTAGGAGTGGAATATTTGGGCCCTGGAGCCACGGGAATGCACTGGAAATCTAGGAGTGGAATATTTGGGCCCCAGAGCCACGGGAAC i panPan2.chr6 T 286 C 0 s gorGor5.CYUI01015032v1 11538717 96 - 12463322 ACTGGAAATCTAGGAGTGGAATATTTGGGCCCCGGAGCCACGGGAACGCACTGGAAATCTAGGAGTGGAATATTTGGGCCCCGGAGCCACGGGAAC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156371436 96 + 157873769 ACTGGAAATCTAGGAGTGGAATAGCCGGGCCATGGAGCCACAGGAACGTACTGGAAATCTAGGAGTGGAATAGCCGGGCCACGGAGCCACAGGAAC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170399114 96 + 172585720 ACTGGAAATCTAGGAGTAGCATAGCTGGGCCACGGAGTCACAGGAAAGCACTGGAAATCTAGGAGTAGCATAGCTGGGCCACAGAGCCACAGGAAC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169142397 96 - 170955103 ACTGGAAATCTAGGAGTAGCATAGCTGGGCCACGGAGTCACAGGAAAGCACTGGAAATCTAGGAGTAGCATAGCTGGGCCACAGAGCCACAGGAAC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8428776 96 + 10161646 ACTGGAAATCTAGGAGTAGCATAGCTGGGCCACGGAGTCACAGGAAAGCACTGGAAATCTAGGAGTAGCATAGCTGGGCCACAGAGCCACAGGAAC i macNem1.NW_012011000v1 C 0 C 0 s manLeu1.NW_012106474v1 8306686 96 - 10857215 GCTAGAAATCTAGGAGTGGCATAGCTGGGCCACGGAGACACAGGAACATGCTAGAAATCTAGGAGTGGAATAGCTGGGCCACGGAGACACAGGAAC i manLeu1.NW_012106474v1 C 0 T 49 e otoGar3.GL873575 10988881 3627 - 12073884 I e saiBol1.JH378287 1352667 1156 - 2905041 I e aotNan1.NW_018494782v1 1564371 1175 - 1813869 I e cebCap1.NW_016107695v1 1317878 1305 - 2164891 I e calJac3.chr4 169953685 1186 + 171630274 I e dasNov3.JH569188 651076 2870 + 760995 I e colAng1.NW_012114488v1 15670022 0 - 23502949 C e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C e cerAty1.NW_012002071v1 1459154 0 + 3144229 C a score=146.000000 s hg38.chr6_KB021644v2_alt 166382 2 + 185823 GC s panTro5.chr6 173628728 2 + 175400573 AC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171855519 2 + 173848474 GC i panPan2.chr6 C 0 T 98 s gorGor5.CYUI01015032v1 11538813 2 - 12463322 GC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156371532 2 + 157873769 AC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170399210 2 + 172585720 AA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169142493 2 - 170955103 AA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8428872 2 + 10161646 AA i macNem1.NW_012011000v1 C 0 C 0 s manLeu1.NW_012106474v1 8306733 2 - 10857215 AT i manLeu1.NW_012106474v1 T 49 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e saiBol1.JH378287 1352667 1156 - 2905041 I e aotNan1.NW_018494782v1 1564371 1175 - 1813869 I e cebCap1.NW_016107695v1 1317878 1305 - 2164891 I e calJac3.chr4 169953685 1186 + 171630274 I e dasNov3.JH569188 651076 2870 + 760995 I e colAng1.NW_012114488v1 15670022 0 - 23502949 C e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C e cerAty1.NW_012002071v1 1459154 0 + 3144229 C a score=133423.000000 s hg38.chr6_KB021644v2_alt 166384 46 + 185823 ACTGGAAATCTAGGAGTGGAATAGCTGGGCCCCGGAGCCACGGGAA s panTro5.chr6 173628730 46 + 175400573 ACTGGAAATCTAGGAGTGGAATATTTGGGCCCCAGAGACACAGGAA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171855423 46 + 173848474 ACTGGAAATCTAGGAGTGGAATATTTGGGCCCTGGAGCCACGGGAA i panPan2.chr6 T 98 C 0 s gorGor5.CYUI01015032v1 11538815 46 - 12463322 ACTGGAAATCTAGGAGTGGAATATTTGGGCCCTGGAGCCACGGGAA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156371534 46 + 157873769 ACTGGAAATCTAGGAGTGGAATAGCTGGGCCCCAGAGCCACAGGAA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170399212 46 + 172585720 GCTGGAAATCTAGGAGTGGAATAACTGGGCCACGGAGCCACAGGAA i rheMac8.chr4 C 0 T 49 s macFas5.chr4 169142495 46 - 170955103 GCTGGAAATCTAGGAGTGGAATAACTGGGCCATGGAGCCACAGGAA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8428874 46 + 10161646 GCTGGAAATCTAGGAGTGGAGTAACTGGGCCACGGAGCCACAGGAA i macNem1.NW_012011000v1 C 0 T 49 s manLeu1.NW_012106474v1 8306735 46 - 10857215 GCTAGAAATCTAGGAGTGGAATAGCTGGGCCACGGAGACACAGGAA i manLeu1.NW_012106474v1 C 0 T 122 e otoGar3.GL873575 10988881 3627 - 12073884 I e saiBol1.JH378287 1352667 1156 - 2905041 I e aotNan1.NW_018494782v1 1564371 1175 - 1813869 I e cebCap1.NW_016107695v1 1317878 1305 - 2164891 I e calJac3.chr4 169953685 1186 + 171630274 I e dasNov3.JH569188 651076 2870 + 760995 I e colAng1.NW_012114488v1 15670022 0 - 23502949 C e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C e cerAty1.NW_012002071v1 1459154 0 + 3144229 C a score=5575.000000 s hg38.chr6_KB021644v2_alt 166430 5 + 185823 TGCAC s panTro5.chr6 173628776 5 + 175400573 CGCAC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171855469 5 + 173848474 TGCAC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11538861 5 - 12463322 TGCAC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156371580 5 + 157873769 CGCAC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170399209 3 + 172585720 --CAA i rheMac8.chr4 T 49 I 2 s macFas5.chr4 169142541 5 - 170955103 CTCAC i macFas5.chr4 C 0 T 49 s macNem1.NW_012011000v1 8428871 3 + 10161646 --CAA i macNem1.NW_012011000v1 T 49 I 2 e otoGar3.GL873575 10988881 3627 - 12073884 I e saiBol1.JH378287 1352667 1156 - 2905041 I e aotNan1.NW_018494782v1 1564371 1175 - 1813869 I e cebCap1.NW_016107695v1 1317878 1305 - 2164891 I e calJac3.chr4 169953685 1186 + 171630274 I e dasNov3.JH569188 651076 2870 + 760995 I e colAng1.NW_012114488v1 15670022 0 - 23502949 C e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C e cerAty1.NW_012002071v1 1459154 0 + 3144229 C e manLeu1.NW_012106474v1 8306781 122 - 10857215 T a score=2548.000000 s hg38.chr6_KB021644v2_alt 166435 1 + 185823 T s panTro5.chr6 173628781 1 + 175400573 T i panTro5.chr6 C 0 C 0 s panPan2.chr6 171855474 1 + 173848474 T i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11538866 1 - 12463322 T i gorGor5.CYUI01015032v1 C 0 I 63 s nomLeu3.chr3 156371585 1 + 157873769 T i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170399214 1 + 172585720 T i rheMac8.chr4 I 2 C 0 s macFas5.chr4 169142497 1 - 170955103 T i macFas5.chr4 T 49 C 0 s macNem1.NW_012011000v1 8428876 1 + 10161646 T i macNem1.NW_012011000v1 I 2 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e saiBol1.JH378287 1352667 1156 - 2905041 I e aotNan1.NW_018494782v1 1564371 1175 - 1813869 I e cebCap1.NW_016107695v1 1317878 1305 - 2164891 I e calJac3.chr4 169953685 1186 + 171630274 I e dasNov3.JH569188 651076 2870 + 760995 I e colAng1.NW_012114488v1 15670022 0 - 23502949 C e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C e cerAty1.NW_012002071v1 1459154 0 + 3144229 C e manLeu1.NW_012106474v1 8306781 122 - 10857215 T a score=86290.000000 s hg38.chr6_KB021644v2_alt 166436 39 + 185823 GGAAATCTAGGAGTGGAATATTTGGGCCCCGGAGCCATG s panTro5.chr6 173628782 39 + 175400573 GGAAATCTAGGAGTGGAATATTTGGGCCCCGGAGCCACG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171855475 39 + 173848474 GGAAATCTAGGAGTGGAATATTTGGGCCCCAGAGCCACG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11538930 39 - 12463322 GGAAATCTAGGAGTGGAATAGCCGGGCCCCGGAGCCATG i gorGor5.CYUI01015032v1 I 63 T 87 s nomLeu3.chr3 156371586 39 + 157873769 GGAAATCTAGGAGTGGAATAGCCGGGCCATGGAGCCACC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170399215 39 + 172585720 GGAAATCTAGGAGTGGAATAACTGGGCCACGGAGCCACA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169142498 39 - 170955103 GGAAATCTAGGAGTGGAATAACTGGGCCATGGAGCCACA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8428877 39 + 10161646 GGAAATCTAGGAGTGGAGTAACTGGGCCACGGAGCCACA i macNem1.NW_012011000v1 C 0 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e saiBol1.JH378287 1352667 1156 - 2905041 I e aotNan1.NW_018494782v1 1564371 1175 - 1813869 I e cebCap1.NW_016107695v1 1317878 1305 - 2164891 I e calJac3.chr4 169953685 1186 + 171630274 I e dasNov3.JH569188 651076 2870 + 760995 I e colAng1.NW_012114488v1 15670022 0 - 23502949 C e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C e cerAty1.NW_012002071v1 1459154 0 + 3144229 C e manLeu1.NW_012106474v1 8306781 122 - 10857215 T a score=9336.000000 s hg38.chr6_KB021644v2_alt 166475 5 + 185823 GGAAC s panTro5.chr6 173628821 5 + 175400573 GGAAC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171855514 5 + 173848474 GGAAC i panPan2.chr6 C 0 C 0 s nomLeu3.chr3 156371625 5 + 157873769 AGAAC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170399254 5 + 172585720 GGAAC i rheMac8.chr4 C 0 T 49 s macFas5.chr4 169142537 5 - 170955103 GGAAC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8428916 5 + 10161646 GGAAC i macNem1.NW_012011000v1 C 0 T 49 e otoGar3.GL873575 10988881 3627 - 12073884 I e saiBol1.JH378287 1352667 1156 - 2905041 I e aotNan1.NW_018494782v1 1564371 1175 - 1813869 I e cebCap1.NW_016107695v1 1317878 1305 - 2164891 I e calJac3.chr4 169953685 1186 + 171630274 I e dasNov3.JH569188 651076 2870 + 760995 I e colAng1.NW_012114488v1 15670022 0 - 23502949 C e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C e cerAty1.NW_012002071v1 1459154 0 + 3144229 C e manLeu1.NW_012106474v1 8306781 122 - 10857215 T e gorGor5.CYUI01015032v1 11538969 87 - 12463322 T a score=-4575.000000 s hg38.chr6_KB021644v2_alt 166480 4 + 185823 --ACAC s panTro5.chr6 173628826 4 + 175400573 --GCAC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171855519 4 + 173848474 --GCAC i panPan2.chr6 C 0 C 0 s nomLeu3.chr3 156371630 3 + 157873769 ---CAC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170399210 4 + 172585720 AAGC-- i rheMac8.chr4 T 49 C 0 s macFas5.chr4 169142542 2 - 170955103 --TC-- i macFas5.chr4 C 0 T 47 s macNem1.NW_012011000v1 8428872 4 + 10161646 AAGC-- i macNem1.NW_012011000v1 T 49 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e saiBol1.JH378287 1352667 1156 - 2905041 I e aotNan1.NW_018494782v1 1564371 1175 - 1813869 I e cebCap1.NW_016107695v1 1317878 1305 - 2164891 I e calJac3.chr4 169953685 1186 + 171630274 I e dasNov3.JH569188 651076 2870 + 760995 I e colAng1.NW_012114488v1 15670022 0 - 23502949 C e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C e cerAty1.NW_012002071v1 1459154 0 + 3144229 C e manLeu1.NW_012106474v1 8306781 122 - 10857215 T e gorGor5.CYUI01015032v1 11538969 87 - 12463322 T a score=1911.000000 s hg38.chr6_KB021644v2_alt 166484 1 + 185823 T s panTro5.chr6 173628830 1 + 175400573 T i panTro5.chr6 C 0 C 0 s panPan2.chr6 171855523 1 + 173848474 T i panPan2.chr6 C 0 C 0 s nomLeu3.chr3 156371633 1 + 157873769 T i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170399214 1 + 172585720 T i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169142497 1 - 170955103 T i macFas5.chr4 T 47 C 0 s macNem1.NW_012011000v1 8428876 1 + 10161646 T i macNem1.NW_012011000v1 C 0 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e saiBol1.JH378287 1352667 1156 - 2905041 I e aotNan1.NW_018494782v1 1564371 1175 - 1813869 I e cebCap1.NW_016107695v1 1317878 1305 - 2164891 I e calJac3.chr4 169953685 1186 + 171630274 I e dasNov3.JH569188 651076 2870 + 760995 I e colAng1.NW_012114488v1 15670022 0 - 23502949 C e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C e cerAty1.NW_012002071v1 1459154 0 + 3144229 C e manLeu1.NW_012106474v1 8306781 122 - 10857215 T e gorGor5.CYUI01015032v1 11538969 87 - 12463322 T a score=96873.000000 s hg38.chr6_KB021644v2_alt 166485 43 + 185823 GGAAATCTAGGAGTGGAATAGCCGGGCCCTGGAGCCACGGGAA s panTro5.chr6 173628831 43 + 175400573 GGAAATCTAGGAGGGGAATATTTGGGCCCCGGAGCCACGGGAA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171855524 43 + 173848474 GGAAATCTAGGAGTGGAATAGCCGGGTCCCGGAGCCACAGGAA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11538882 43 - 12463322 GGAAATCTAGGAGTGGAATAGCCGGGCCCTGGAGCCACGGAAT i gorGor5.CYUI01015032v1 T 87 C 0 s nomLeu3.chr3 156371634 43 + 157873769 GGAAATCTAGGAGTGGAATAGCCGGGCCATGGAGCCACAGGAA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170399215 43 + 172585720 GGAAATCTAGGAGTGGAATAACTGGGCCACGGAGCCACAGGAA i rheMac8.chr4 C 0 T 98 s macFas5.chr4 169142498 43 - 170955103 GGAAATCTAGGAGTGGAATAACTGGGCCATGGAGCCACAGGAA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8428877 43 + 10161646 GGAAATCTAGGAGTGGAGTAACTGGGCCACGGAGCCACAGGAA i macNem1.NW_012011000v1 C 0 T 193 e otoGar3.GL873575 10988881 3627 - 12073884 I e saiBol1.JH378287 1352667 1156 - 2905041 I e aotNan1.NW_018494782v1 1564371 1175 - 1813869 I e cebCap1.NW_016107695v1 1317878 1305 - 2164891 I e calJac3.chr4 169953685 1186 + 171630274 I e dasNov3.JH569188 651076 2870 + 760995 I e colAng1.NW_012114488v1 15670022 0 - 23502949 C e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C e cerAty1.NW_012002071v1 1459154 0 + 3144229 C e manLeu1.NW_012106474v1 8306781 122 - 10857215 T a score=-103.000000 s hg38.chr6_KB021644v2_alt 166528 1 + 185823 T s panTro5.chr6 173628874 1 + 175400573 C i panTro5.chr6 C 0 T 98 s panPan2.chr6 171855567 1 + 173848474 C i panPan2.chr6 C 0 C 0 s nomLeu3.chr3 156371677 1 + 157873769 C i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170399160 1 + 172585720 A i rheMac8.chr4 T 98 C 0 s macFas5.chr4 169142541 1 - 170955103 C i macFas5.chr4 C 0 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e saiBol1.JH378287 1352667 1156 - 2905041 I e aotNan1.NW_018494782v1 1564371 1175 - 1813869 I e cebCap1.NW_016107695v1 1317878 1305 - 2164891 I e calJac3.chr4 169953685 1186 + 171630274 I e dasNov3.JH569188 651076 2870 + 760995 I e colAng1.NW_012114488v1 15670022 0 - 23502949 C e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C e cerAty1.NW_012002071v1 1459154 0 + 3144229 C e manLeu1.NW_012106474v1 8306781 122 - 10857215 T e macNem1.NW_012011000v1 8428920 193 + 10161646 T e gorGor5.CYUI01015032v1 11538925 0 - 12463322 C a score=6361.000000 s hg38.chr6_KB021644v2_alt 166529 4 + 185823 GCAC s panTro5.chr6 173628777 4 + 175400573 GCAC i panTro5.chr6 T 98 C 0 s panPan2.chr6 171855568 4 + 173848474 GCAC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11538925 4 - 12463322 GCAC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156371678 3 + 157873769 -CAC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170399161 4 + 172585720 GCAC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169142542 4 - 170955103 TCAC i macFas5.chr4 C 0 T 98 e otoGar3.GL873575 10988881 3627 - 12073884 I e saiBol1.JH378287 1352667 1156 - 2905041 I e aotNan1.NW_018494782v1 1564371 1175 - 1813869 I e cebCap1.NW_016107695v1 1317878 1305 - 2164891 I e calJac3.chr4 169953685 1186 + 171630274 I e dasNov3.JH569188 651076 2870 + 760995 I e colAng1.NW_012114488v1 15670022 0 - 23502949 C e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C e cerAty1.NW_012002071v1 1459154 0 + 3144229 C e manLeu1.NW_012106474v1 8306781 122 - 10857215 T e macNem1.NW_012011000v1 8428920 193 + 10161646 T a score=39489.000000 s hg38.chr6_KB021644v2_alt 166533 24 + 185823 TGGAAATCTAGGAGTGGAATAGCC s panTro5.chr6 173628781 24 + 175400573 TGGAAATCTAGGAGTGGAATATTT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171855572 24 + 173848474 TGGAAATCTAGGAGTGGAATATTT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11538929 24 - 12463322 TGGAAATCTAGGAGTGGAATAGCC i gorGor5.CYUI01015032v1 C 0 T 478 s nomLeu3.chr3 156371681 24 + 157873769 TGGAAATCTAGGAGTGGAATAGCC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170399165 24 + 172585720 TGGAAATCTAGGAGTAGCATAGCT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169142448 24 - 170955103 TGGAAATCTAGGAGTAGCATAGCT i macFas5.chr4 T 98 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e saiBol1.JH378287 1352667 1156 - 2905041 I e aotNan1.NW_018494782v1 1564371 1175 - 1813869 I e cebCap1.NW_016107695v1 1317878 1305 - 2164891 I e calJac3.chr4 169953685 1186 + 171630274 I e dasNov3.JH569188 651076 2870 + 760995 I e colAng1.NW_012114488v1 15670022 0 - 23502949 C e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C e cerAty1.NW_012002071v1 1459154 0 + 3144229 C e manLeu1.NW_012106474v1 8306781 122 - 10857215 T e macNem1.NW_012011000v1 8428920 193 + 10161646 T a score=22666.000000 s hg38.chr6_KB021644v2_alt 166557 23 + 185823 GGGCCCCGGAGCCACAGGAACGC s panTro5.chr6 173628805 23 + 175400573 GGGCCCCGGAGCCACGGGAACGC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171855596 23 + 173848474 GGGCCCCAGAGCCACAGGAACGC i panPan2.chr6 C 0 C 0 s nomLeu3.chr3 156371705 22 + 157873769 GGGCCATGGAGCCACCAGAAC-C i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170399189 23 + 172585720 GGGCCACAGAGCCACAGGAACAA i rheMac8.chr4 C 0 T 147 s macFas5.chr4 169142472 23 - 170955103 GGGCCACAGAGCCACAGGAACAA i macFas5.chr4 C 0 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e saiBol1.JH378287 1352667 1156 - 2905041 I e aotNan1.NW_018494782v1 1564371 1175 - 1813869 I e cebCap1.NW_016107695v1 1317878 1305 - 2164891 I e calJac3.chr4 169953685 1186 + 171630274 I e dasNov3.JH569188 651076 2870 + 760995 I e colAng1.NW_012114488v1 15670022 0 - 23502949 C e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C e cerAty1.NW_012002071v1 1459154 0 + 3144229 C e manLeu1.NW_012106474v1 8306781 122 - 10857215 T e macNem1.NW_012011000v1 8428920 193 + 10161646 T e gorGor5.CYUI01015032v1 11538953 478 - 12463322 T a score=5190.000000 s hg38.chr6_KB021644v2_alt 166580 3 + 185823 ACT s panTro5.chr6 173628828 3 + 175400573 ACT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171855619 3 + 173848474 ACT i panPan2.chr6 C 0 C 0 s nomLeu3.chr3 156371727 3 + 157873769 ACT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170399065 3 + 172585720 act i rheMac8.chr4 T 147 C 0 s macFas5.chr4 169142495 3 - 170955103 GCT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8428727 3 + 10161646 act i macNem1.NW_012011000v1 T 193 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e saiBol1.JH378287 1352667 1156 - 2905041 I e aotNan1.NW_018494782v1 1564371 1175 - 1813869 I e cebCap1.NW_016107695v1 1317878 1305 - 2164891 I e calJac3.chr4 169953685 1186 + 171630274 I e dasNov3.JH569188 651076 2870 + 760995 I e colAng1.NW_012114488v1 15670022 0 - 23502949 C e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C e cerAty1.NW_012002071v1 1459154 0 + 3144229 C e manLeu1.NW_012106474v1 8306781 122 - 10857215 T e gorGor5.CYUI01015032v1 11538953 478 - 12463322 T a score=93711.000000 s hg38.chr6_KB021644v2_alt 166583 48 + 185823 GGAAATCTAGGAGTGGAATATTTGGGCCCTGGAGCCACAGGAACGCAC s panTro5.chr6 173628831 48 + 175400573 GGAAATCTAGGAGGGGAATATTTGGGCCCCGGAGCCACGGGAACGCAC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171855622 48 + 173848474 GGAAATCTAGGAGTGGAATATTTGCATCCCGGAGACACAGGAATGCAC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11538475 48 - 12463322 GGAAATCTAGGAGTGGAATATTTGGGCCCCGGAGACACGGGAACGCAC i gorGor5.CYUI01015032v1 T 478 C 0 s nomLeu3.chr3 156371730 47 + 157873769 AGAAATCTAGGAGTGGAATAGCCGGGGCACAGAGCCACAGGAAC-CAC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170399068 48 + 172585720 ggaaatctaggagtggcatagctgggccacggagtCACAGGAAAGCAC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169142498 48 - 170955103 GGAAATCTAGGAGTGGAATAACTGGGCCATGGAGCCACAGGAACTCAC i macFas5.chr4 C 0 T 98 s macNem1.NW_012011000v1 8428730 48 + 10161646 ggaaatctaggagtggcatagctgggccacggagtCACAGGAAAGCAC i macNem1.NW_012011000v1 C 0 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e saiBol1.JH378287 1352667 1156 - 2905041 I e aotNan1.NW_018494782v1 1564371 1175 - 1813869 I e cebCap1.NW_016107695v1 1317878 1305 - 2164891 I e calJac3.chr4 169953685 1186 + 171630274 I e dasNov3.JH569188 651076 2870 + 760995 I e colAng1.NW_012114488v1 15670022 0 - 23502949 C e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C e cerAty1.NW_012002071v1 1459154 0 + 3144229 C e manLeu1.NW_012106474v1 8306781 122 - 10857215 T a score=92264.000000 s hg38.chr6_KB021644v2_alt 166631 47 + 185823 TGGAAATCTAGGAGTGGAATATTTGGGTCCCGGAGACACAGGAACAC s panTro5.chr6 173628879 46 + 175400573 TGGAAATCTAGGAGTGGAATATTTGGGCCCCGGAGCCACA-GAACAC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171855670 46 + 173848474 TGGAAATCTAGGAGGGGAATATTTGGGCCCCGGAGCCACA-GAACAC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11538523 47 - 12463322 TGGAAATCTAGGAGTGGAATATTTGGGCCCCGGAGCCACGGGAACGC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156371777 47 + 157873769 TGGAAATCTAGGAGTGGAATAGCCGGGCCACGGAGCCACAGGAACAC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170399116 47 + 172585720 TGGAAATCTAGGAGTAGCATAGCTGGGCCACGGAGTCACAGGAAAGC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169142448 47 - 170955103 TGGAAATCTAGGAGTAGCATAGCTGGGCCACAGAGCCACAGGAACAA i macFas5.chr4 T 98 T 147 s macNem1.NW_012011000v1 8428778 47 + 10161646 TGGAAATCTAGGAGTAGCATAGCTGGGCCACGGAGTCACAGGAAAGC i macNem1.NW_012011000v1 C 0 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e saiBol1.JH378287 1352667 1156 - 2905041 I e aotNan1.NW_018494782v1 1564371 1175 - 1813869 I e cebCap1.NW_016107695v1 1317878 1305 - 2164891 I e calJac3.chr4 169953685 1186 + 171630274 I e dasNov3.JH569188 651076 2870 + 760995 I e colAng1.NW_012114488v1 15670022 0 - 23502949 C e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C e cerAty1.NW_012002071v1 1459154 0 + 3144229 C e manLeu1.NW_012106474v1 8306781 122 - 10857215 T a score=100837.000000 s hg38.chr6_KB021644v2_alt 166678 49 + 185823 ACTGGAAATCTAGGAGTGGAATAGCTGGGCCCCGGAGCCACGGGAACGC s panTro5.chr6 173628925 49 + 175400573 ACTGGAATTCTAGGAGTGGAATATTTGGGCCCCGGAGCCACAGGAACGC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171855716 49 + 173848474 ACTGGAATTCTAGGAGTGGAATATTTGGGCCCCGGAGCCACGGGAACGC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11538570 49 - 12463322 ACTGGAAATCTAGGAGTGGAATATTTGGGCCCCGGAGCCACGGGAACGC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156371824 48 + 157873769 ACTGGAAATCTAGGAGTGGAATAGCCAGGCCGCGGAGCCAC-GGAACGC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170399163 49 + 172585720 ACTGGAAATCTAGGAGTAGCATAGCTGGGCCACAGAGCCACAGGAACAA i rheMac8.chr4 C 0 T 147 s macFas5.chr4 169142348 49 - 170955103 actggaaatctaggagtggcatagctgggccacggagtCACAGGAAAGC i macFas5.chr4 T 147 C 0 s macNem1.NW_012011000v1 8428825 49 + 10161646 ACTGGAAATCTAGGAGTAGCATAGCTGGGCCACAGAGCCACAGGAACAA i macNem1.NW_012011000v1 C 0 T 147 e otoGar3.GL873575 10988881 3627 - 12073884 I e saiBol1.JH378287 1352667 1156 - 2905041 I e aotNan1.NW_018494782v1 1564371 1175 - 1813869 I e cebCap1.NW_016107695v1 1317878 1305 - 2164891 I e calJac3.chr4 169953685 1186 + 171630274 I e dasNov3.JH569188 651076 2870 + 760995 I e colAng1.NW_012114488v1 15670022 0 - 23502949 C e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C e cerAty1.NW_012002071v1 1459154 0 + 3144229 C e manLeu1.NW_012106474v1 8306781 122 - 10857215 T a score=133971.000000 s hg38.chr6_KB021644v2_alt 166727 62 + 185823 ACTGGAAATCTAGGAGTGGAATATTTGGGCCCCGGAGCCACGGGAACGCACTGGAAATCTAG s panTro5.chr6 173628974 62 + 175400573 ACTGGAATTCTAGGAGTGGAATATTTGGGCCCCGGAGCCACGGGAACGCACTGGAAATCTAG i panTro5.chr6 C 0 T 167 s panPan2.chr6 171855765 62 + 173848474 ACTGGAATTCTAGGAGTGGAATATTTGGGCCCTGGAGCCACGGGAACGCACTGGAAATCTAG i panPan2.chr6 C 0 T 49 s gorGor5.CYUI01015032v1 11538619 62 - 12463322 ACTGGAAATCTAGGAGTGGAATATTTGGGCCCCGGAGCCACGGGAACGCACTGGAAATCTAG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156371872 61 + 157873769 ACTAGAAATCTAGGAGTGGAATAGCCGGGGCACAGAGCCACAGGAAC-TACTGGAAATCTAG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170399065 62 + 172585720 actggaaatctaggagtggcatagctgggccacggagtCACAGGAAAGCACTGGAAATCTAG i rheMac8.chr4 T 147 C 0 s macFas5.chr4 169142397 62 - 170955103 ACTGGAAATCTAGGAGTAGCATAGCTGGGCCACGGAGTCACAGGAAAGCACTGGAAATCTAG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8428727 62 + 10161646 actggaaatctaggagtggcatagctgggccacggagtCACAGGAAAGCACTGGAAATCTAG i macNem1.NW_012011000v1 T 147 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e saiBol1.JH378287 1352667 1156 - 2905041 I e aotNan1.NW_018494782v1 1564371 1175 - 1813869 I e cebCap1.NW_016107695v1 1317878 1305 - 2164891 I e calJac3.chr4 169953685 1186 + 171630274 I e dasNov3.JH569188 651076 2870 + 760995 I e colAng1.NW_012114488v1 15670022 0 - 23502949 C e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C e cerAty1.NW_012002071v1 1459154 0 + 3144229 C e manLeu1.NW_012106474v1 8306781 122 - 10857215 T a score=42089.000000 s hg38.chr6_KB021644v2_alt 166789 28 + 185823 GAGTGGAATAGCCAGGCCCCGGAGCCAC s panPan2.chr6 171855778 28 + 173848474 GAGTGGAATATTTGGGCCCTGGAGCCAC i panPan2.chr6 T 49 C 0 s gorGor5.CYUI01015032v1 11538681 28 - 12463322 GAGTGGAATATTTGGGCCCCGGAGCCAC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156371933 28 + 157873769 GAGTGGAATAGCCGGGCCACGGAGCCAC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170399127 28 + 172585720 GAGTAGCATAGCTGGGCCACGGAGTCAC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169142459 28 - 170955103 GAGTAGCATAGCTGGGCCACAGAGCCAC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8428789 28 + 10161646 GAGTAGCATAGCTGGGCCACGGAGTCAC i macNem1.NW_012011000v1 C 0 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e saiBol1.JH378287 1352667 1156 - 2905041 I e aotNan1.NW_018494782v1 1564371 1175 - 1813869 I e cebCap1.NW_016107695v1 1317878 1305 - 2164891 I e calJac3.chr4 169953685 1186 + 171630274 I e dasNov3.JH569188 651076 2870 + 760995 I e colAng1.NW_012114488v1 15670022 0 - 23502949 C e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C e cerAty1.NW_012002071v1 1459154 0 + 3144229 C e manLeu1.NW_012106474v1 8306781 122 - 10857215 T e panTro5.chr6 173629036 167 + 175400573 T a score=46122.000000 s hg38.chr6_KB021644v2_alt 166817 21 + 185823 GGGAACGCACTTGAAATCTAG s panTro5.chr6 173628869 21 + 175400573 GGGAACGCACTGGAAATCTAG i panTro5.chr6 T 167 C 0 s panPan2.chr6 171855806 21 + 173848474 GGGAACGCACTGGAAATCTAG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11538709 21 - 12463322 GGGAACGCACTGGAAATCTAG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156371961 21 + 157873769 AGGAACACACTGGAAATCTAG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170399155 21 + 172585720 AGGAAAGCACTGGAAATCTAG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169142487 21 - 170955103 AGGAACAAGCTGGAAATCTAG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8428817 21 + 10161646 AGGAAAGCACTGGAAATCTAG i macNem1.NW_012011000v1 C 0 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e saiBol1.JH378287 1352667 1156 - 2905041 I e aotNan1.NW_018494782v1 1564371 1175 - 1813869 I e cebCap1.NW_016107695v1 1317878 1305 - 2164891 I e calJac3.chr4 169953685 1186 + 171630274 I e dasNov3.JH569188 651076 2870 + 760995 I e colAng1.NW_012114488v1 15670022 0 - 23502949 C e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C e cerAty1.NW_012002071v1 1459154 0 + 3144229 C e manLeu1.NW_012106474v1 8306781 122 - 10857215 T a score=14595.000000 s hg38.chr6_KB021644v2_alt 166838 9 + 185823 GAGTGGAAT s panTro5.chr6 173628890 9 + 175400573 GAGTGGAAT i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11538730 9 - 12463322 GAGTGGAAT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156371982 9 + 157873769 GAGTGGAAT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170399176 9 + 172585720 GAGTAGCAT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169142508 9 - 170955103 GAGTGGAAT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8428838 9 + 10161646 GAGTAGCAT i macNem1.NW_012011000v1 C 0 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e saiBol1.JH378287 1352667 1156 - 2905041 I e aotNan1.NW_018494782v1 1564371 1175 - 1813869 I e cebCap1.NW_016107695v1 1317878 1305 - 2164891 I e calJac3.chr4 169953685 1186 + 171630274 I e dasNov3.JH569188 651076 2870 + 760995 I e colAng1.NW_012114488v1 15670022 0 - 23502949 C e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C e cerAty1.NW_012002071v1 1459154 0 + 3144229 C e manLeu1.NW_012106474v1 8306781 122 - 10857215 T e panPan2.chr6 171855827 0 + 173848474 C a score=39033.000000 s hg38.chr6_KB021644v2_alt 166847 19 + 185823 AGCTGGGCCCCGGAGCCAC s panTro5.chr6 173628899 19 + 175400573 ATTTGGGCCCCGGAGCCAC i panTro5.chr6 C 0 I 132 s gorGor5.CYUI01015032v1 11538739 19 - 12463322 ATTTGGGCCCCGGAGCCAC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156371991 19 + 157873769 AGCCGGGCCCCGGAGCCAC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170399185 19 + 172585720 AGCTGGGCCACAGAGCCAC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169142517 19 - 170955103 AACTGGGCCATGGAGCCAC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8428847 19 + 10161646 AGCTGGGCCACAGAGCCAC i macNem1.NW_012011000v1 C 0 C 0 s manLeu1.NW_012106474v1 8306659 19 - 10857215 AGCTGGGCCACGGAGACAC i manLeu1.NW_012106474v1 T 122 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e saiBol1.JH378287 1352667 1156 - 2905041 I e aotNan1.NW_018494782v1 1564371 1175 - 1813869 I e cebCap1.NW_016107695v1 1317878 1305 - 2164891 I e calJac3.chr4 169953685 1186 + 171630274 I e dasNov3.JH569188 651076 2870 + 760995 I e colAng1.NW_012114488v1 15670022 0 - 23502949 C e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C e cerAty1.NW_012002071v1 1459154 0 + 3144229 C e panPan2.chr6 171855827 0 + 173848474 C a score=10026.000000 s hg38.chr6_KB021644v2_alt 166866 7 + 185823 GGGAACC s gorGor5.CYUI01015032v1 11538758 7 - 12463322 GGGAACG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156372010 7 + 157873769 AGGAACA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170399204 7 + 172585720 AGGAACA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169142536 7 - 170955103 AGGAACT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8428866 7 + 10161646 AGGAACA i macNem1.NW_012011000v1 C 0 C 0 s manLeu1.NW_012106474v1 8306678 7 - 10857215 AGGAACA i manLeu1.NW_012106474v1 C 0 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e saiBol1.JH378287 1352667 1156 - 2905041 I e aotNan1.NW_018494782v1 1564371 1175 - 1813869 I e cebCap1.NW_016107695v1 1317878 1305 - 2164891 I e calJac3.chr4 169953685 1186 + 171630274 I e dasNov3.JH569188 651076 2870 + 760995 I e colAng1.NW_012114488v1 15670022 0 - 23502949 C e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C e cerAty1.NW_012002071v1 1459154 0 + 3144229 C e panPan2.chr6 171855827 0 + 173848474 C e panTro5.chr6 173628918 132 + 175400573 I a score=3095.000000 s hg38.chr6_KB021644v2_alt 166873 3 + 185823 CAC s panPan2.chr6 171855827 3 + 173848474 CAC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11538765 3 - 12463322 CAC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156372017 3 + 157873769 CAC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170399211 3 + 172585720 AGC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169142543 3 - 170955103 CAC i macFas5.chr4 C 0 T 49 s macNem1.NW_012011000v1 8428873 3 + 10161646 AGC i macNem1.NW_012011000v1 C 0 C 0 s manLeu1.NW_012106474v1 8306685 3 - 10857215 TGC i manLeu1.NW_012106474v1 C 0 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e saiBol1.JH378287 1352667 1156 - 2905041 I e aotNan1.NW_018494782v1 1564371 1175 - 1813869 I e cebCap1.NW_016107695v1 1317878 1305 - 2164891 I e calJac3.chr4 169953685 1186 + 171630274 I e dasNov3.JH569188 651076 2870 + 760995 I e colAng1.NW_012114488v1 15670022 0 - 23502949 C e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C e cerAty1.NW_012002071v1 1459154 0 + 3144229 C e panTro5.chr6 173628918 132 + 175400573 I a score=27202.000000 s hg38.chr6_KB021644v2_alt 166876 11 + 185823 TGGAAATCTAG s panPan2.chr6 171855830 11 + 173848474 TGGAAATCTAA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11538768 11 - 12463322 TGGAAATCTAG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156372020 11 + 157873769 TGGAAATCTAG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170399214 11 + 172585720 TGGAAATCTAG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169142497 11 - 170955103 TGGAAATCTAG i macFas5.chr4 T 49 C 0 s macNem1.NW_012011000v1 8428876 11 + 10161646 TGGAAATCTAG i macNem1.NW_012011000v1 C 0 C 0 s manLeu1.NW_012106474v1 8306688 11 - 10857215 TAGAAATCTAG i manLeu1.NW_012106474v1 C 0 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e saiBol1.JH378287 1352667 1156 - 2905041 I e aotNan1.NW_018494782v1 1564371 1175 - 1813869 I e cebCap1.NW_016107695v1 1317878 1305 - 2164891 I e calJac3.chr4 169953685 1186 + 171630274 I e dasNov3.JH569188 651076 2870 + 760995 I e colAng1.NW_012114488v1 15670022 0 - 23502949 C e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C e cerAty1.NW_012002071v1 1459154 0 + 3144229 C e panTro5.chr6 173628918 132 + 175400573 I a score=34968.000000 s hg38.chr6_KB021644v2_alt 166887 13 + 185823 GAGTGGAATAGCT s panTro5.chr6 173629050 13 + 175400573 GAGTGGAATAGCC i panTro5.chr6 I 132 C 0 s panPan2.chr6 171855841 13 + 173848474 GAGTGGAATAGCC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11538779 13 - 12463322 GAGTGGAATATTT i gorGor5.CYUI01015032v1 C 0 I 161 s nomLeu3.chr3 156372031 13 + 157873769 GAGTGGAATAGCC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170399225 13 + 172585720 GAGTGGAATAACT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169142508 13 - 170955103 GAGTGGAATAACT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8428887 13 + 10161646 GAGTGGAGTAACT i macNem1.NW_012011000v1 C 0 C 0 s manLeu1.NW_012106474v1 8306699 13 - 10857215 GAGTGGCATAGCT i manLeu1.NW_012106474v1 C 0 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e saiBol1.JH378287 1352667 1156 - 2905041 I e aotNan1.NW_018494782v1 1564371 1175 - 1813869 I e cebCap1.NW_016107695v1 1317878 1305 - 2164891 I e calJac3.chr4 169953685 1186 + 171630274 I e dasNov3.JH569188 651076 2870 + 760995 I e colAng1.NW_012114488v1 15670022 0 - 23502949 C e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C e cerAty1.NW_012002071v1 1459154 0 + 3144229 C a score=58154.000000 s hg38.chr6_KB021644v2_alt 166900 20 + 185823 GGGCCCCGGAGCCACGGGAA s panTro5.chr6 173629063 20 + 175400573 GGGCCCTGGAGCCACAGGAA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171855854 20 + 173848474 GGGCCCTGGAGCCACAGGAA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11538953 20 - 12463322 GGGCCCCGGAGCCATGGGAA i gorGor5.CYUI01015032v1 I 161 C 0 s nomLeu3.chr3 156372044 20 + 157873769 GGGCCCCAGAGCCACAGGAA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170399238 20 + 172585720 GGGCCACGGAGCCACAGGAA i rheMac8.chr4 C 0 I 1 s macFas5.chr4 169142521 20 - 170955103 GGGCCATGGAGCCACAGGAA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8428900 20 + 10161646 GGGCCACGGAGCCACAGGAA i macNem1.NW_012011000v1 C 0 I 1 s manLeu1.NW_012106474v1 8306712 20 - 10857215 GGGCCACGGAGACACAGGAA i manLeu1.NW_012106474v1 C 0 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e saiBol1.JH378287 1352667 1156 - 2905041 I e aotNan1.NW_018494782v1 1564371 1175 - 1813869 I e cebCap1.NW_016107695v1 1317878 1305 - 2164891 I e calJac3.chr4 169953685 1186 + 171630274 I e dasNov3.JH569188 651076 2870 + 760995 I e colAng1.NW_012114488v1 15670022 0 - 23502949 C e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C e cerAty1.NW_012002071v1 1459154 0 + 3144229 C a score=5260.000000 s hg38.chr6_KB021644v2_alt 166920 5 + 185823 TGCAC s panTro5.chr6 173629083 5 + 175400573 TGCAC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171855874 5 + 173848474 TGCAC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11538973 5 - 12463322 TGCAC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156372064 5 + 157873769 CACAC i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169142541 5 - 170955103 CTCAC i macFas5.chr4 C 0 T 25 s manLeu1.NW_012106474v1 8306732 3 - 10857215 --CAT i manLeu1.NW_012106474v1 C 0 I 2 e otoGar3.GL873575 10988881 3627 - 12073884 I e saiBol1.JH378287 1352667 1156 - 2905041 I e aotNan1.NW_018494782v1 1564371 1175 - 1813869 I e cebCap1.NW_016107695v1 1317878 1305 - 2164891 I e calJac3.chr4 169953685 1186 + 171630274 I e dasNov3.JH569188 651076 2870 + 760995 I e colAng1.NW_012114488v1 15670022 0 - 23502949 C e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C e cerAty1.NW_012002071v1 1459154 0 + 3144229 C e macNem1.NW_012011000v1 8428920 1 + 10161646 I e rheMac8.chr4 170399258 1 + 172585720 I a score=31987.000000 s hg38.chr6_KB021644v2_alt 166925 24 + 185823 TTGAAatctaggagtggaatagcc s panTro5.chr6 173629088 24 + 175400573 TGGAAATCTAGGAGTGGAATAGCC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171855879 24 + 173848474 TGGAAATCTAGGAGTGGAATAGCC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11538978 24 - 12463322 TGGAAatctaggagtggaatagcc i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156372069 24 + 157873769 TGGAAATCTAGGAGTGGAATAGCC i nomLeu3.chr3 C 0 C 0 s manLeu1.NW_012106474v1 8306737 24 - 10857215 TAGAAATCTAGGAGTGGAATAGCT i manLeu1.NW_012106474v1 I 2 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e saiBol1.JH378287 1352667 1156 - 2905041 I e aotNan1.NW_018494782v1 1564371 1175 - 1813869 I e cebCap1.NW_016107695v1 1317878 1305 - 2164891 I e calJac3.chr4 169953685 1186 + 171630274 I e dasNov3.JH569188 651076 2870 + 760995 I e colAng1.NW_012114488v1 15670022 0 - 23502949 C e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C e cerAty1.NW_012002071v1 1459154 0 + 3144229 C e macNem1.NW_012011000v1 8428920 1 + 10161646 I e rheMac8.chr4 170399258 1 + 172585720 I e macFas5.chr4 169142546 25 - 170955103 T a score=29202.000000 s hg38.chr6_KB021644v2_alt 166949 18 + 185823 gggccctggagccacaga s panTro5.chr6 173629112 18 + 175400573 AGGCCACGGAGCCACAGA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171855903 18 + 173848474 GGGCCACGGAGCCACAGA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11539002 18 - 12463322 gggccacggagccacaga i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156372093 18 + 157873769 GGGCCCCAGAGCCACAGG i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169142521 18 - 170955103 GGGCCATGGAGCCACAGG i macFas5.chr4 T 25 C 0 s manLeu1.NW_012106474v1 8306761 18 - 10857215 GGGCCACGGAGACACAGG i manLeu1.NW_012106474v1 C 0 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e saiBol1.JH378287 1352667 1156 - 2905041 I e aotNan1.NW_018494782v1 1564371 1175 - 1813869 I e cebCap1.NW_016107695v1 1317878 1305 - 2164891 I e calJac3.chr4 169953685 1186 + 171630274 I e dasNov3.JH569188 651076 2870 + 760995 I e colAng1.NW_012114488v1 15670022 0 - 23502949 C e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96744396 0 + 98384682 C e cerAty1.NW_012002071v1 1459154 0 + 3144229 C e macNem1.NW_012011000v1 8428920 1 + 10161646 I e rheMac8.chr4 170399258 1 + 172585720 I a score=5481.000000 s hg38.chr6_KB021644v2_alt 166967 3 + 185823 aat s panTro5.chr6 173629130 3 + 175400573 AAC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171855921 3 + 173848474 AAC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11539020 3 - 12463322 aac i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156372111 3 + 157873769 AAC i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169142539 3 - 170955103 AAC i macFas5.chr4 C 0 C 0 s chlSab2.chr13 96744396 3 + 98384682 tac i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8306779 3 - 10857215 AAC i manLeu1.NW_012106474v1 C 0 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e saiBol1.JH378287 1352667 1156 - 2905041 I e aotNan1.NW_018494782v1 1564371 1175 - 1813869 I e cebCap1.NW_016107695v1 1317878 1305 - 2164891 I e calJac3.chr4 169953685 1186 + 171630274 I e dasNov3.JH569188 651076 2870 + 760995 I e colAng1.NW_012114488v1 15670022 0 - 23502949 C e canFam3.chr1 56226451 371 + 122678785 I e cerAty1.NW_012002071v1 1459154 0 + 3144229 C e macNem1.NW_012011000v1 8428920 1 + 10161646 I e rheMac8.chr4 170399258 1 + 172585720 I a score=3995986.000000 s hg38.chr6_KB021644v2_alt 166970 853 + 185823 gcacttctccaacttcagacgcagccacgttgtctcccagtcgttgcaggaatcccactcccatgagtgtggaacagttcccTTAACCCTCTCCAGGTTTCTATTTTGTTCATAAACTTACTtattagtccaaattctccagaaaaacagaaccaatgggaggtagagagatataagagcagatggattatgaacattggctcctgtaactatagaagctgaagagtcccatgatctgctgtctgcaagccggaaagattctggtgttgctgagtctgaatctgaggcctgaaggctggtgagctgctggtgttgactgaggagtccaagaccagagaacctagagctccagtgtccgagggcaggaaaggatggatgttccagcccacgg----agagagaggga------------gggagggagggagagagagaatgtgtatttcttttccctggtaaagttgagtatcctgtactcagtttactgattcaaacattaatttcatccaaaaggatcctcacagagacatccataataaca------------tctgagcatccctcagcctagtcaagtcaacacgtaagattagccatcataATTATGTTGCTTTACAAGTACTGACataacgaattgtgatatcttgtagcataattttcatcatcttttttc-ttctttcttttgtgcctgtatttttgtgactactttatgacctttgttctttattataaggcctagacaatcttgccatattttgtaaaaaaaatcctgctgagattataatgtgaagggcatgaaatctataaatta-tttgcagagttttgagatcttcacaatattgaatctttttatccatgaacatggtaaatatttc s panTro5.chr6 173629133 853 + 175400573 ACACTTCTCCAACTTCAGACGCAGCCACATTGTCTCCCAGTCGTTGCAGGAATCCCACTCCCATGAGTGTGGAACAGTTCCCTTAACCCTCTCCAGGTTTCTATTTTGTTCATAAACTTACTtattagtccaaattctccagaaaaccagaaccaataggaggtagagagatataagaggagatggattatgaacattggctcctgtaagtatagaagctgaggagtcccatgatctgctgtctgcaagccagaaagattctggtgtagctgagtctgaatctgaggcctgaaggctggtgagctgctggtgttgactgaggagtccaagaccagagaacctggagctccagtgtccgagggcaggaaaggatggatgttccagcccacgg----agagagaggga------------gggagggagggagagacagaatgtgtatttcttttccctggtaaagtcgagtatcctgtactcagtttactgattcaaacattaatttcatccaaaagcatcctcacagagacatccataataaca------------tctgagcatccctcagcctagtcaagttcacacgtaagattagccatcataATTATGTTGCTTTAAAAGTGCTGACataacgaattgtgatatcttatagcataattttcatcatcttttttt-gtctttcttttgtgcctgtatttttgtgactactttatgacctttgttctttattataaggcctagacaatcttgccacattttgtaaaaagaatcctgctgagattataatgagaagggcatgaaatctataaatta-tttgcagagttttgagatcttcacaatattgaatctttttatccatgaacatggtaaatatttc i panTro5.chr6 C 0 C 0 s panPan2.chr6 171855924 847 + 173848474 GCACTTCTCCAACTTCAGACGCAGCCACATTGTCTCCCAGTTGTTGCAGGAATCCCACTCCCATGAGTGTGGAACAGTTCCCTTAACCCTCTCCA-GTTTCTATTTTGTTCATAAACTTACTtattagtccaaattctctagaaaaccagaaccaataggaggtagagagatataagaggagatggattatgaacattggctcctgtaactatagaagctgaggagtcccatgatctgctgtctgcaagccagaaagattctggtgtagctgagtctgaatctgaggcctgaaggctggtgagctgctggtgttgactgaggagtccaagaccagagaacctagagctccagtgtccgagggcaggaaaggatggatgttccagcccacgg----agagagaggga-----------------ggagggagagagagaatgtgtatttcttttccctggtaaagtcgagtatcctgtactcagtttactgattcaaacattaatttcatccaaaagcatcctcacagagacatccataataaca------------tctgagcatccctcagcctagtcaagttcacacataagattagccatcataATTATGTTGCTTTAAAAGTACTGACataacgaattgtgatatcttgtagcataattttcatcatcttttttt-gtccttcttttgtgcctgtatttttgtgactactttatgacctttgttctttattataaggcctagacaatcttgccacattttgtaaaaagaatcctgctgagattataatgagaagggcatgaaatctataaatta-tttgcagagttttgagatcttcacaatattgaatctttttatccatgaacatggtaaatatttc i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11539023 862 - 12463322 gcacttctccaacttcagacagagccacgttgtctcccagtggttgcaggaatcccactcccatgagtgtggaacagttcccTTAACCCTCTCCAGGTTTCTATTTTGTTCATAAACTTACTtattagtccaaattctccagaaaaacagaaccaataggaggtagagagatataagaggagatggattatgaacattggctcctgtaactatagaagctgaggagtcccatgatctgccgtatgcaagccagaaagattctggtgtagctgagtctgaatctgaggcctgaaggctggtgagctgctggtgttgactgaggagttcaagtccagagaacctagagctccagtgtcggagggcaggaaaggatggatgttccagcccacgg----agagggaggga----------------gggagggagagagagaatgtgtatttcttttccctggtaaagtcgagtatcctgtactcagtttactgattcaaacattaatttcatccaaaagcatcctcacagagacatccataataacatcttaccaactttctgagcatccctcagcctagtcaagttaacacgtaagattacccatcataATTACGTTGCTTTAAATGTACTGACataacgaattgtgatatcttgtagcataattttcatcctctttttttcatctttcttttgtgcctgtatttttgtgactactttatgacctttgttctttattataaggcctagacaatcttgccacattttgtaaaaaaaatcctgctgagattataatgagaagggcatgaaatctataaatta-tttgcagagttttgacatcttcacaatattgaatcttttcatccatgaacatggtaaatatttc i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156372114 862 + 157873769 GCATGTCTCCAACTTCAGACGCAGCCATGTTGTCTCCCAGTCCTTGCAGGAATCGCACTCCCATGAGTGTGGAACAGTTCCCTTAACCCTCTCCAGGTTTCTATTTTGTTCATAAACTTACTtattagtccaaattctccagaaaaacagaaccaataggatgtagaaagatataagaggagatggattatgaacattggctcctgtaactatagaagctgaggagtcccatgatctgccgtctgtaagccagaaagattctggtgtagctgagtctgaatctgaggcctgaaggctggtgagctgctggtgttgactgaggagtccaagcccggagaacctagagctccagtgtctgagggcagggaaggatggaga----agcccacggagatagagagaggga------------gggagggaaggagagagagaatgtgcatttcttttccctggtaaagtcgaatatcctgtactcagtttactgattcaaatgctaatttcatccaaaagcatcctcacagagacatccaccataacatcttaccaacttcctgagcatccctcagcctagtcacgttaacacgtaagattagccatcacaATTATGTTGCTTTAAAAGTACTGACataacgaattgtgatatcttgtagcatagttttcatcatcttttttt----cttcttttgtgcctgtatgtttgtgactactttatgacctttgttctttattataaggcctagacaatcttgccacattttgtaaaaaaaaacctgctaagattataatgagaagggcatgaaatctataaatta-tttgcagagttttgagttcttcacaatattgaatctttttatccatgaacatggtaaatctttc i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170399259 878 + 172585720 TCACGTTTCCAACTTCAGATGCAGCCACATTTTCTCCCAGTCTTTGCAGGAATCACACTCCCATGAGTGTGGAACAGTTTTCTTAACCCTCTCCAGATTTCTATTTTGCTCATAAATTTACTtattagtccagattctccagaaaaacagaaccaataggatgtagagagatataagaggagatggattatgaccattggctcctgtaactatagaagctgaggagtcccatgatctggcgtctgcaagccagaaagattctggtgtagttgagtctgaatctgaggcctgaaggctggtgagctgctggtgttgactgaggagtccaagacctgagaacctggagctccagtgtccaaggacaggaaaggatggatgttccagcccaagg----agagggagggagtgaaggagggagggagagagggagagagagaatgtgtatttcttttccctggtaaagtcaaatatcctgtactcagtttattgattcaaacattaatttcatccaaaagcatcctcacagagacatccacaataacatcttaccaactgtctaagcatccctcagcctagtcaagttaacacataagattagccatcacaATTATGTTGTTTTAAAAGTACTGACATAACTAACTGtgataccttgtatcataattttcatcatcttttttc-ttctttcttttgtacctgtatttttgtgactactttatgacctttgttctttattataaggcctagacaatcttgccacattttatttaaaaaatcctgctgagattataatgagaagggcatgaaatctataaattactttgcagagttttgagatcttcacaatattgaatatttctatccatgaacatggtaaatctttc i rheMac8.chr4 I 1 C 0 s macFas5.chr4 169142542 878 - 170955103 TCACGTTTCCAACTTCAGATGCAGCCACATTTTCTCCCAGTCTTTGCAGGAATCACACTCCCATGAGTGTGGAACAGTTTTCTTAACCCTCTCCAGATTTCTATTTTGCTCATAAATTTACTtattagtccagattctccagaaaaacagaaccaataggatgtagagagatataagaggagatggattatgaccattggctcctgtaactatagaagctgaggagtcccatgatctggcgtctgcaagccagaaagattctggtgtagttgagtctgaatctgaggcctgaaggctggtgagctgctggtgttgactgaggagtccaagacctgagaacctggagctccagtgtccgaggacaggaaaggatggatgttccagcccaagg----agagggagggagtgaaggagggagggagagagggagagagagaATGTGTATTTCTTTTCCctggtaaagtcgaatatcctgtactcagtttattgattcaaacattaatttcatccaaaagcatcctcacagagacatccacaataacatcttaccaactgtctaagcatccctcagcctagtcaagttaacacataagattagccatcacaATTATGTTGTTTTAAAAGTACTGACATAACTAACTGtgataccttgtatcataattttcatcatcttttttc-ttctttcttttgtacctgtatttttgtgactactttatgacctttgttctttattataaggcctagacaatcttgccacattttattaaaaaaatcctgctgagattataatgagaagggcatgaaatctataaattactttgcagagttttgagatcttcacaatattgaatatttctatccatgaacatggtaaatctttc i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8428921 874 + 10161646 TCACGTTTCCAACTTCAGATGCAGCCACATTTTCTCCCAGTCTTTGCAGGAAT----CTCCCATGAGTGTGGAACAGTTTTCTTAACCCTCTCCAGATTTCTATTTTGCTCATAAATTTACTtattagtccagattctgcagaaaaacagaaccaataggatgtagagagatataagaggagatggattatgaccattggctcctgtaactatagaagctgaggagtcccatgatctggcgtctgcaagccagaaggattctggtgtagttgagtctgaatctgaggcctgaaggctggtgagctgctggtgttgactgaggagtccaagacctgagaacctggagctccagtgtccaaggacaggaaaggatggatgttccagcccaagg----agagggagggagtgaagaagggagggagagagggagagagagaatgtgtatttcttttccctggtaaagtcgaatatcctgtactcagtttattgattcaaacattaatttcatccaaaagcatcctcacagagacatccacaataacatcttaccaactgtctaagcatccctcagcctagtcaagttagcacataagattagccatcacaATTATGTTGTTTTAAAAGTACTGACATAACTAACTGtgataccttgtatcataattttcatcatcttttttc-ttctttcttttgtacctgtatttttgtgactactttatgacctttgttctttattataaggcctagacaatcttgccacattttattaaaaaaatcctgctgagattataatgagaagggcatgaaatctataaattactttgcagagttttgagatcttcacaatattgaatatttctgtccatgaacatggtaaatctttc i macNem1.NW_012011000v1 I 1 C 0 s cerAty1.NW_012002071v1 1459154 878 + 3144229 tcacgtttccaacttcagatgcagccacattttctaccagtctttgcaggaatcacactcccatgagtgtggaacagttttcttaaccctctccaGATTTCTATTTTGCTCATAAATTTACTtattagtccagattctccagaaaaacagaaccaataggatgtagagagatataagaggagatggattatgaccattggctcctgtaactatagaagctgaggggtcccatgatctggcgtctgcaagccagaaagattctggtgtagttgagtctgaatctgaggcctgaaggctggtgagctgctggtgttgactgaggagtccaagacctgagaacctggagctccagtgtccgaggacaggaaaggatggatgttccagcccaagg----agagggagggagtgaaagagggagggagagagggagagagagaatgtgtatttcttttccctggtaaagtcgaatatcctgtactcagtttattgattcaaacattaatttcatccaaaagcatcctcacagagacatccacaataacatcttaccaactgtctgagcatccctcagcctagtcaagttaacacataagattagccatcacaATTATGTCATTTTAAAAGTACTGACGTAACTAACTGtgataccttgtatcataattttcatcatcttttttc-ttctttcttttgtacctgtatttttgtgactactttatgacctttgttctttattataaggcctagacaatcttgccacattttattaaaaaaatcctgctgagattataatgagaagggcatgaaatttataaattactttgcagagttttgagaacttcacaatattgaatatttctatccatgaacatggtaaatctttc i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96744399 878 + 98384682 tcacgtttccaacttcagatgcagccacattttctcccagtctttgcaggaatcacactcccatgagtgtagaacagttttcTTAACCCTCTCCAGATTTCTATTTTGCTCATAAATTCACTtattagtccagattctccagaaaaacagaaccaataggatgtagagagatataagaggagatggattatgaccattggctcctgtaactatagaagctgaggagtcccatgatctggcgtctgcaagccagaaagattctggtgtagttgagtctgaatctgaggcctgaaggctggtgagctgctggtgttgactgaggagtccaagacctgagaacctggagctccagggtccaaggacaggaaaggagggatgttccagcccaagg----agagggagggagtGAagaagggagggagagagggagagagagaATGTGTATTTCTTTTCCctggtaaagtcgaatatcctgtactcagtttattgattcaaacattaatttcatccaaaagcatcctcacagagacatccacaataacatcttaccaactgtctgagcatccctcagcctagtcaagttaacacataagattagccatcacaATTATGTTGTTTTAAAAGTACTGACATAACTAACTGtgataccttgtatcataattttcatcatcttttttc-ttctttcttttgtacctgtatttttgtgactactttatgacctttgttctttattataaggcctagacaatcttgccacattttattaaaaaactcctgctgagattataatgagaagggcatgaaatctataaattactttacagagttttgagaacttcacagtattgaatatttcaatccatgaacatggtaaatctttc i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8306782 871 - 10857215 TCACGTTTCCAACTTCAGATGCAGCCACATTTTCTCCCAGTCTTTGCAGGAATCACACTCCCATGAGTGTGGAACAGTTTCCTTAACCCTCTCTAGATTTCTATTTTGCTCATAAATTCACTtattagtccagattctccagaaaaacagaaccaataggatgtagagaaatatgagaggagatgcattaagaccattggctcctgtaactatagaagctgaggagtcccatgatctggcgtctgcaagccagaaagattctggtgtagttgagtctgaatctgaggcctgaaggctggtgagctactgctgttgactgaggagtccaagacctgagaacctggagctccagtgtccgaggacaggaaaggatggatgttccagcccaagg----a----gagggagtgaaggagggagggagagagggagagagagaatgtgtatttc-tttccctggtaaagtcg-atatcctgtactcagtttattgattcaaacattaatttcatcc-aaagcatcctcacagagacatccacaataacatcttaccaaatgtctgagcatccctcagcctagtcaagttaacacataagattagccatcacaATTATGTTGTTTTAAAAGTACTGACGTAACTAATTGtgataccttgtatcataattttcatcatcttctttc-ttctttcttttgtacctgtatttttgtgactactttatgacctttgttctttattataaggcctagacaatcttgccacattttattaagaaaatcctgctgagattataatgagaagggcatgaaatctataaattactttgcagagttttgagatcttcacaatattgaatatttctatccatgaacatggtaagtctttc i manLeu1.NW_012106474v1 C 0 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e saiBol1.JH378287 1352667 1156 - 2905041 I e aotNan1.NW_018494782v1 1564371 1175 - 1813869 I e cebCap1.NW_016107695v1 1317878 1305 - 2164891 I e calJac3.chr4 169953685 1186 + 171630274 I e dasNov3.JH569188 651076 2870 + 760995 I e colAng1.NW_012114488v1 15670022 0 - 23502949 C e canFam3.chr1 56226451 371 + 122678785 I a score=25201.000000 s hg38.chr6_KB021644v2_alt 167823 5 + 185823 cattt s panTro5.chr6 173629986 5 + 175400573 cattt i panTro5.chr6 C 0 C 0 s panPan2.chr6 171856771 5 + 173848474 cattt i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11539885 5 - 12463322 cattt i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156372976 5 + 157873769 cattc i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170400137 5 + 172585720 cattc i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169143420 5 - 170955103 cattc i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8429795 5 + 10161646 cattc i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1460032 5 + 3144229 cattc i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96745277 5 + 98384682 cattc i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8307653 5 - 10857215 cattc i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169954871 5 + 171630274 cACTT i calJac3.chr4 I 1186 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e saiBol1.JH378287 1352667 1156 - 2905041 I e aotNan1.NW_018494782v1 1564371 1175 - 1813869 I e cebCap1.NW_016107695v1 1317878 1305 - 2164891 I e dasNov3.JH569188 651076 2870 + 760995 I e colAng1.NW_012114488v1 15670022 0 - 23502949 C e canFam3.chr1 56226451 371 + 122678785 I a score=30276.000000 s hg38.chr6_KB021644v2_alt 167828 5 + 185823 actta s panTro5.chr6 173629991 5 + 175400573 actta i panTro5.chr6 C 0 C 0 s panPan2.chr6 171856776 5 + 173848474 actta i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11539890 5 - 12463322 actta i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156372981 5 + 157873769 actta i nomLeu3.chr3 C 0 I 2 s rheMac8.chr4 170400142 5 + 172585720 actta i rheMac8.chr4 C 0 I 2 s macFas5.chr4 169143425 5 - 170955103 actta i macFas5.chr4 C 0 I 2 s macNem1.NW_012011000v1 8429800 5 + 10161646 actta i macNem1.NW_012011000v1 C 0 I 2 s cerAty1.NW_012002071v1 1460037 5 + 3144229 actta i cerAty1.NW_012002071v1 C 0 I 2 s chlSab2.chr13 96745282 5 + 98384682 actta i chlSab2.chr13 C 0 I 2 s manLeu1.NW_012106474v1 8307658 5 - 10857215 actta i manLeu1.NW_012106474v1 C 0 I 2 s calJac3.chr4 169954876 1 + 171630274 ----A i calJac3.chr4 C 0 I 2 s saiBol1.JH378287 1353823 5 - 2905041 actta i saiBol1.JH378287 I 1156 I 2 e otoGar3.GL873575 10988881 3627 - 12073884 I e aotNan1.NW_018494782v1 1564371 1175 - 1813869 I e cebCap1.NW_016107695v1 1317878 1305 - 2164891 I e dasNov3.JH569188 651076 2870 + 760995 I e colAng1.NW_012114488v1 15670022 0 - 23502949 C e canFam3.chr1 56226451 371 + 122678785 I a score=225215.000000 s hg38.chr6_KB021644v2_alt 167833 32 + 185823 tgtttttaatatgcctcaaaaatttgtaattt s panTro5.chr6 173629996 32 + 175400573 tgtttttaatatgcctcaaaactttgtaattt i panTro5.chr6 C 0 C 0 s panPan2.chr6 171856781 32 + 173848474 tgtttttaatatgcctcaaaactttgtaattt i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11539895 32 - 12463322 tgtttttaatatgcctcaaaaatttgtaattt i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156372988 32 + 157873769 tgtttttaatatgcctcaaaaatttgtaattt i nomLeu3.chr3 I 2 C 0 s rheMac8.chr4 170400149 32 + 172585720 tgtttttaatatgcctcaaaaatttgtaattt i rheMac8.chr4 I 2 C 0 s macFas5.chr4 169143432 32 - 170955103 tgtttttaatatgcctcaaaaatttgttattt i macFas5.chr4 I 2 C 0 s macNem1.NW_012011000v1 8429807 32 + 10161646 tgtttttaatatgcctcaaaaatttgtaattt i macNem1.NW_012011000v1 I 2 C 0 s cerAty1.NW_012002071v1 1460044 32 + 3144229 tgtttttaatatgcctcaaaaatttgtaattt i cerAty1.NW_012002071v1 I 2 C 0 s chlSab2.chr13 96745289 32 + 98384682 tgttttaaatatgcctcaaaaatttgtaattt i chlSab2.chr13 I 2 C 0 s manLeu1.NW_012106474v1 8307665 32 - 10857215 tgtttttaatatgcctcaaaaatttgtaattt i manLeu1.NW_012106474v1 I 2 C 0 s calJac3.chr4 169954879 15 + 171630274 TGTTTTTAATATGCC----------------- i calJac3.chr4 I 2 C 0 s saiBol1.JH378287 1353830 32 - 2905041 tgtttttaatatgcctcaaaaatttgtaattt i saiBol1.JH378287 I 2 C 0 s cebCap1.NW_016107695v1 1319183 32 - 2164891 tgtttttaataggcctcaaaaatttgtaattt i cebCap1.NW_016107695v1 I 1305 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e aotNan1.NW_018494782v1 1564371 1175 - 1813869 I e dasNov3.JH569188 651076 2870 + 760995 I e colAng1.NW_012114488v1 15670022 0 - 23502949 C e canFam3.chr1 56226451 371 + 122678785 I a score=6809075.000000 s hg38.chr6_KB021644v2_alt 167865 856 + 185823 tctctatttgtatctcatgaacattttgttagttactttctatttttgtgg---ggtttttttctgttacatgtaatgtttctaagtcttgagttattc-tttttgatggtgcaagggagtataatggaattttaactgtgattgataactattttaattttt-cctattaacctatttagaatagtgcctgctctatattgaatactacataaatgtttgttaaaaaagtaaggaaagctgctcgttctctaagttaactctcgggtagctcgggaatgattacaacatcctctcttcctatcctgcactttgtgttccccgctcagtgctaacatgcacctccagcataacactgaatagaagctggggtcatgagcttccttggtttcatctgaagtcttctggggaatgttgcttccgtgtcactgtaagttctgatatttgacatggttactttagttagccataccttattggaataagagtgttcctttatatttttagttcgctaa----tttttttt---aatctcaccatgtagga-ttttttctccttgattttgttgccatagtaaattttgaaaagcattaataggttttctaacgtttttgtcttgttgacttagaatgtactcaactacatcatgatgtaaatattttagtata-ttttttctggattttctttcttaaca-ttttgtttattacttttgcatctatattcatcaataagatcgac-----atgttttatttttatgctatattttgctgggctaagattttgatatcgtattcagtgatttggggagtgttcctcatttcctggtctctggaagaatatgtgtggttatacagttatttgctcatttaa--t s panTro5.chr6 173630028 857 + 175400573 tctctatttgtatctcatgaacattttgttagttactttctatttttatgg---ggtttttttctgttacatgtaatgtttctaagtcttgagttattc-tttttgatggtgcaagggaatataatggacttttaactgtgattgataactattttaattttt-cctattaacctatttagaatagtgcctgctctatattgaatactacataaatgtttgttaaaaaagtaaggaaagctgctcgttttctaagttaactctcgggtagctcgggagtgattacaacatcctctcttcctatcctgcaccttgtgttccccgctcagtgctaacatgcacctccagcataacactgaatagaagctggggtcatgagctcccttggtttcatctgaagtcttctggggaatgttgcttccatgtcactgtaagttctgatatttgacatggttactttagttagccataccttattggaataagagtgttcctttatatttttagttcgctaa----tttttttt---agtctcaccatgtagga-ttttttctccttgattttgttgccatagtaaattttgaaaagcattaataggttttctaacgtttttgtcttgttgacttagaatgtactcaactacatcatgatgtaaatattttagtata-ttttttctggattttctttcttaaca-ttttgttta----ttttgcatctatattcatcaataacatcgacatgtaatgttttatttttatgctatattttgctgggctaagattttgatatcgtattcagtgatttggggagtgttcctcatttcctggtctctggaagaatatgtgtggttatacacttatttgctcatttaa--t i panTro5.chr6 C 0 C 0 s panPan2.chr6 171856813 857 + 173848474 tctctatttgtatctcatgaacattttgttagttactttctatttttatgg---ggtttttttctgttacatgtaatgtttctaagtcttgagttattc-tttttgatggtgcaagggagtataatggacttttaactgtgattgataactattttaattttt-cttattaacctatttagaatagtgcctgctctatattgaatactacataaatgtttgttaaaaaagtaaggaaagctgctcgttttctaagttaactctcgggtagctcgggagtgattacaacatcctctcttcctatcctgcaccttgtgttccccactcagtgctaacatgcacctccagcataacactgaatagaagctggggtcatgagcttccttggtttcatctgaagtcttctggggaatgttgcttccatgtcactgtaagttctgatatttgacatggttactttagttagccataccttattggaataagagtgttcctttatatttttagttcgctaa----tttttttt---agtctcaccatgtagga-ttttttctccttgattttgttgccatagtaaattttgaaaagcattaataggttttctaacgtttttgtcttgttgacttagaatgtactcaactacatcatgatgtaaatattttagtata-ttttttctggattttctttcttaaca-ttttgttta----ttttgcatctatattcatcaataagatcgacatgtaatgttttatttttatgctatattttgctgggctaagattttgatatcgtattcagtgatttggggagtgttcctcatttcctggtctctggaagaatatgtgtggttatacacttatttgctcatttaa--t i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11539927 857 - 12463322 tctctatttgtatctcatgaacattttgttagttactttctatttttatgg---gttttttttctgttacatgtaatgtttctaagtcttgagttgttc-tttttgatggtgcaagggagtataatggaattttaactgtgattgataactattttaattttt-cctattaacctatttagaatagtgcctgctctatattgaatactacataaatgtttgttaaaaaagtaaggaaagctgctcgttctctaagttaactctcgggtagctcgggagtgattacaacatcctctcttcctatcctgcaccttgtgttccccgctcagtgctaacatgcacctccagcataacactgaatagaagctggggtcatgagcttccttggtttcatctgaagtcttctggggaatgttgcttccatgtcactgtaagttctgatatttgacatggttactttagttagccataccttattggaataagagtgttcctttatatttttagttcgctaa----ttttttta---aatctcaccatgtagga-ttttttctccttgattttgttgccatagtaaattttgaaaagcattaataggttttctaacgtttttgtcttgttgacttggaatgtactcaactacatcatgatgtaaatattttagtata-ttttttctggattttctttcttaaca-ttttattac----ttttgcatctatattcatcaataagatcgacatgtaatgttttatttttatgctatattttgctgggctaagattttgatatcatattcagtgatttggggagtgttcctcatttcctggtctctggaagaatatgtgtggttatacagttatttgctcatttaa--t i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156373020 847 + 157873769 tctccatttgtatctcatgaacattttgttag----tttctatttttatgg---g-tttttttctgttacatgtaatgtttctaagtcttgagttattc-ttttggatggtgcaagggagtataatggaattttaacagtgattgataactattttaattttt-cctgttaacctatttagaatagtgcctgctctatgttgagtactacataaa----tgttaaaaaaataaggaaagctgctcattctctaagttaaccctcgggtagctcgggggtgatttcaacatcctctcttccgatcctgcaccttgtgttccctgttcagtgctaacatgcacctccagcgtaacactgagtcgaagctggggtcatgagcttccttggtttcatctgaagtcttctggggaatgttgcttccatgtcactggaagttctgata-ttgacatggttactttagttagccatatcttattggaataagagtgttcctttatatttttagttcgctaa---ttttttttt---aatctcaccatgtagga-ttttttctccttgattttgttgccatagtaaattttgaaaagcgttaataggttttctaacgtttttgtcttgttgacttggaatgtactcaactacatcatgatgtaaatattttagtata-ttttttctggat----tttcctaaca-ttttgtttattacttttgcatctatattcatcaataagattgacatgtaatgtttta-ttttatgctatattttgctgggcgaagattttgatatcatattcagtgatttggggagtgttcctcatttcctggtctctggaagaatatgtgtggttatacagttatttgctcatttaa--t i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170400181 861 + 172585720 tctccatttctatctcatgaaaattttgtca----ctttctgtttttatgg---tttttttttctgttacatgtaatgtttctaagtcttgagttattc-tttttggtggtgcaagggagtataatggaattttagctgtgatcaataactattttaatttttccctattaacctatttagaatagtgcctgctctatattgaataccacataaatgtttgtt-aaaaattaaggaaagctgctcgttctctaacttaactctcgggtagctctagcgtgattacgacatcctctcttcctatcctgcgccttgcactccccactcagtgctaacatgcatctccagcgtaacactgagtagaagctgggatcatgagcttccttggtttcatctgaagtcttctagggaatgttgcttccatgtcactgtaatttctgatatttgacatggttactttagttagccataccctactggaataagagtattcttttatatttttagcttgctaa----tttttttaaaaaatctcaccatgaaggatttttttctccttgagtttgttgccatagtaaattttgaaaaccattaatagattttctaacctttttgtcttgctgacttagaatgtactcaactatgtcatgatgtaaatattttagtatatttttttctggattttctttcttaaca-ttttgtttattacttttgcatctatattcatcaataagatagacatgtaatgttttatttttatgctgtattttgctgggctaagattttgatatcatattcagtgatttggggagtgttcctcatttcctggtctctggaagaatatgtgtggttatacagttatttgctcatttaa--- i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169143464 860 - 170955103 tcTCCATTTCTATCTCATGAAAATTTTGTCA----CTTTCTGTTTTTAT-G---TTTTTTTTCCTGTTACATGTAATGTTTCTAAGTCTTGAGTTATTC-TTTTTGGTGGTGCAAGGGAGTATAATGGAATTTTAGCTGTGATCAATAACTATTTTAATTTTTCCCTATTAACCTATTTAGAATAGTGCCTGCTCTATATTGAATACCACATAAATGTTTGTT-AAAAATTAAGGAAAGCTGCTCGTTCTCTAAGTTAACTCTCGGGTAGCTCTAGCGTGATTACGACATCCTCTCTTCCTATCCTGCGCCTTGCACTCCCCACTCAGTGCTAACATGCATCTCCAGCGTAACACTGAGTAGAAGCTGGGATCATGAGCTTCCTTGGTTTCATCTGAAGTCTTCTAGGGAATGTTGCTTCCATGTCACTGTAATTTCTGATATTTGACATGGTTACTTTAGTTAGCCATACCCTACTGGAATAAGAGTATTCTTTTATATTTTTAGCTTGCTAA----TTTTTTTTAAAAATCTCACCATGAAGGATTtttttctccttgagtttgttgccatagtaaattttgaaaaccattaatagattttctaacctttttgtcttgctgacttagaatgtactcaactatgtcatgatgtaaatattttagtatatttttttctggattttctttcttaaca-ttttgtttattacttttgcatctatattcatcaataagatagacatgtaatgttttatttttatgctgtattttgctgggctaagattttgatatcatattcagtgatttggggagtgttcctcatttcctggtctctggaagaatatgtgtggttatacagttatttgctcatttaa--- i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8429839 859 + 10161646 tctccatttctatctcatgaaaattttgtca----ctttctgtttttat-g---tttttttttctgttacatgtaatgtttctaagtcttgagttattc-tttttggtggtgcaagggagtataatggaattttagctgtgatcaataactattttaatttttccctattaacctatttagaatagtgcctgctctatattgaataccacataaatgtttgtt-aaaaattaaggaaagctgctcgttctctaagttaactctcgggtagctctagcgtgattacgacatcctctcttcctatcctgcaccttgcactccccactcagtgctaacatgcatctccagcgtaacactgagtagaagctgggatcatgagcttccttggtttcatctgaagtcttctagggaatgttgcttccatgtcactgtaatttctgatatttgacatggttactttagttagccataccctactggaataagagtattcttttatatttttagcttgctaa---ttttttttttttaatctcaccatgaaggatttttttctccttgagtttgttgccatagtaaattttgaaaaccattaatagattttctaacctttttgtcttgctgacttagaatgtactcaactatgtcatgatgtaaatattttagtatatttttttctggattttctttcttaaca-ttttgtttattacttttgcatctatattcatcaataagatagacatgtaatgttttatttttatgctgtattttgctgggctaagattttgatatcatattcagtgatttggggagtgttcctcatttcctggtctctggaagaata--tgtggttatacagttatttgctcatttaa--- i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1460076 860 + 3144229 tctccatttctatctcatgaaaattttgtta----ctttctgttttcat-ggtttttttttttctgttatatgtaatgtttctaagtcttgagttgttc-tttttgatggtgcaagggagtataatggaattttagctgtgatcaataactattttaattttt-cctattaacctatttagaatagtgcctgctctatattgaataccacataaatgtttgtt-aaaaattaaggaaagctgctcattctctaagttaactctcgggtagctctggcgtgattacgacatcctctcttcctatcctgcaccttgcactccccactcagtgctaacgtgcatctccagcgtaacactgaatcgaagctgggatcatgagcttccttggtttcatctgaagtcttctagggaatgttgcttccatgtcactgtaatttctcatatttgacatggttactttagttagccataccttattggaataagagtattcttttatatttttagtttgctaa----tttttttt--taatctcaccatgtaggatttttttctccttgagtttgttgccatagtaaattttgaaaagcattaatagattttctaacctttttgtcttgctgacttagaatgtactcaactatgtcatgatgtaaatattttagtata-ttttttctggattttctttcttaaca-ttttgtttattacttttgcatctatattcatcaataagattgacatgtaatgttttatttttatgctgtattttgctgggctaagattttgatatcatattcagtgatttggggagtgttcctcatttcctggtctctggaagaatatgtgtggttatacagttatttgctcatttaat-- i cerAty1.NW_012002071v1 C 0 I 34 s chlSab2.chr13 96745321 858 + 98384682 tcTCCATTTCTATCTCATGAAAAttttgtca----ctttctgtttttat-g---tttttttttctgttacatgtaatgtttctaagtcttgagttgttc-tttttgatgGTGCAAGGGAGTATAATGGAATTTTAGCTGTGATCAATAACTATTTTAATTTTT-CCTATTAACCTATTTAGAATAGTGCCTGCTGTATATTGAATACCACATAAATGTTTGTTAAAAAAATAAGGAAAGCTGCTCGTTCTCTAAGTTAACTCTCGAGTAGCTCTGGAGTGATTATGACATCCTCTCTTCCTATCCTGCACCTTGCACTCCCCACTCAGTGCTAACATGCATCTCCAGCATAACACTGAATAGAAGCGGGGATCATGAGCTTCCTTGGTTTCATGTGAAGTCTTCTAGGGAATGTTGCTTCCATGTCACTGTAATTTCTCATATTTGACATCGTTACTTTAGTGAGCCATACCTTATTGGAATAAGAGTATTCTTTTATATTTTTAGTTTGCTAA---TTTTTTTTT--TAATCTCACCATGTAGGATTtttttctccttgagtttgttgccatagtaaattttgaaaagcattaatagattttctaatgtttttgtcttgctgacttagaatgtactcaactatgtcatgatgtaaatattttagtata-atttttctggattttctttcttaaca-ttttgtttattacttttgcatctatatgcat-aataagattgacatgtaatgttttatttttatgctgtattttgctgggctaagattttgatatcatattcagtgatttgagaagtgttcctcatttcctggtctctggaagaatatgtgtggttatacagttatttgctgatttaa-t- i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8307697 859 - 10857215 tctccatttctatctcatgaaaattttgtta----CTTTCTGTTTTTAT-G-TTTTTTTTTTTCTGTTACATGTAATGTTTCTAAGTCTTGAGTTGTTCTTTTTTGATGGTGCAAGGGAGTATAATGGAATTTTAGCTGTGATCAATAACTATTTTAATTTTT-CCTATTAACCTATttagaatagtgcctgctgtatattgaataccacataaatgtttgtt-aAAAAATAAGGAAAGCTGCTCGTTCTCTAAGTTAACTCTCGGGTAGCTCTGGCGTGATTACGACATCCTCTCTTCCTATCCTGCACCTTGCACTCCCCACTCAGTGCCAACATACATCTCCAGCGTAACACTGAGTAGAAGCTGGCATCATGAGCTTCCTTGGTTTCATCTGAAGTCTTCTAGGGAATGTTGCTTCCATGTCACTGTAATTTCTCATATTTGACATGGTTACTTTAGTTAGCCATACCTTATTGGAATAAGAGTATTCTTTTATATTTTTAGTTTGCTAA----TTTTTTTT--TAATCTCACCATGTAGGATTtttttctccttgagtttgttgccatagtaaattttgaaaagcattaatagattttctaacctttttgtcttgctgacttagaaggtactcaactatgtcatgatgtaaatattttagtata-atttttctggattttctttcttaaca-ttttgtttattacttttgcatctatatgcat-aataagattgacatgtaatgttttatttttatgctgtattttgctgggctaagattttgatatcatattcagtgatttggggagtgttcctcatttcctggtctctggaagaatatgtgtggttatacagttatttgctcatttaa-t- i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169954894 840 + 171630274 TCTCCATTTGTATCTCATGAAAACTTCATTAGTTACCTTTTATTTCTAC-A--TTTTTTTTTTCTGTTACATGTAATGTTTCTAAGTACTGAGGT-TTC-TTTTTGATAGTG-AAGGGAGTATAAAGGAATTTTGGCTGTGATGGATAACCGTTTCGATTTTTTTCTATTAACCTATTTAGAATAGTGCATGA---ATGTT------------------TGTTAAACGCATAAGGAAAGCTGCTCGTTCTCTAGCTTAGCTCTCAGGTAGCTCAGGAGTGATTACGATGCCCTCTCTCCCTACCCTGCACCTTGTGTT-CCCGCTCAGAGCTAACGTGAAGttcaagcataatgttgaaaagaagctgtgatcttgggcttccttggattcatccggagtcttccagggaaagctgcttccatgttactgtaagttctgctgtttgacatggttactttagttagacaccccttattgggataagagtgttcctttatatttttagtttgccaaaattttattttt--aaacctcgccatgtagga-tcttttctccttgattttgttgccctggtaaattttgaaaagtatgaacagactttctaatgttgttgtcttgcggacttagaatgtactcaactacgtcatgatgtaaatattttagtat--ttttttctgcattttctttcttaacatttttgtttattacttttgcatctatattcatcaataaaattggcatgtaattttttatttttatgctacatttt-ctgggctgagactttggtatcttattcagtgattcagggagtgttccttattttctggtctccggaagaatgtgtg-ggttaga-agttatttgtctgtttaa--t i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1353862 859 - 2905041 tctccatttgtatctcatgagaattttgttagttactttttatttttac-a----ttttttttctgttacatgtaatgtttctaagtattgagttattc-tttttgatggtgtaaaggagtataaaggaattttggctgtgatggataaccattttaatttttttctattaacctgtttagaatagtgcctgctctatattgaacagtacataaa----tgttaaaaacataaagaaagctgctcgttctctaagttctctctcaggcagctcggaagtgcttacgatgccctctctccctatcctgcaccgtgccttgcctgctcagagctaacgtgcacctcaagcataatgttgaaaagaagctgggatcttgagcttccttggattcatctgaagtcttctagggaaagttgcctccgtgttactgtaagttctgctgtttgacatagttactttagttagccataccttattgggataagagtgttccttcatatttttagtttgccaaaattttatttta--aaatctcaccatgtagga-ttttttctccttgatttcgttgccatggtaaattttgaaaagcatacagaggctttctaatgtttttgtcttcctgacttagaatgtactcaattacatcatgatgtaaatattttaatat--ttttttctggacttcctttcttaaca-ttttgttttttacttttgcatctatattcatcaataagattgacatgtaattttttctttttatgctacatttt-ctgggctgagattttggtatcgtattcagtgatttggggagtgttccttattttctggtctctggaagaatatgtgtggttatacagttatttgtgtgtttaa--t i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1319215 858 - 2164891 tttccatttgtagctcacaaaaattttgttagttactttttatttttac-a----ttttttttctgttacatgtaatgtttttaagtattgagtttttc-tttttgatggtgtaagggaggataaaggaatttgggctgtgacggataaccattttaatttttttctattaacctatttagaatagtgcctgctctgtattgaacagtacataagtgtttgttaaaaacataaggaaagctgctcgttctccaagttaactctcaggtagctcaggagtgcttacgatgccctctctccctgtcttacaccttgcgttccctgctcagagctaacgtgcatctcaaccataatgttgaaaagaagctgggatcttgagcttccctggattcatctgaagtcttctagggaaagttgcttccatgttactgtaagttctgctatttgacatgg-----ttagttggccataccttattgggataagggtgttcctttatatttttagtttgccaaaattttattttt--aaatttcaccatgtagga-ttttttctccttgattttgttgccatggtaaattttgaaaagcatgaataggctttcgaatgtttttgtcttgctgacttagaatgtactcaactacatcacgatgtaaatattttggcat--ttttttctggattttctttcttaaca-ttttgttttttacttttgcatctatattcatcaataagattgacatgcaattttttatttttaggctacatttt-ctgggctgagattttggtatcatattcagtgatttggggagtgttccttattttctggtctctggaagaatatgtgtggttatacagttatttgtttgtttaa--t i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1565546 861 - 1813869 tctccatttgtatctcatgaaaagtttgttagttaccttttatttttac-a-----ttcttttctgttacatgtaatgtttctaagtattgagttattc-tttttgatAGTG-AAGGGAGTATAAAGGAATTTTGGCTGTGATGGACAACCATTTTAATTTTTTTCTGTTAACCTATTTAGAACAGTGCCTGCTCTATATGGAACAGTACATAAATGTTTGTTTAAAACATAAGGAAAGCTGCTCGTTCTCTAAGTTAACCCTCAGGTAGCTCAGGAGTGATTACGATGCCCCATCTCCCTATCCTGCACCTTGCGTTCCCCGCTCAGAGCTAACGTGCAGttcaagcataatgttgaaaagaagctgggatgttgagcttccttggcttcatctgaagtcttccagggaaagttgcttccatgttactgtaagttctgctatttgacacggttactttagttagccataccttactgggctaagagtgttcctttatatttttagtttgccaaaattttattttt--aaatctcaccatgtagga-ttttttctccttgattttgttgctatggtaaattttgaaaagcatgaataggctttctaatgtttttgtcttgctgacttagaatgtactcaactacatcatgatgtaaatattttagtat--ttttttctggattttctttcttaaca-ttttgtttattacttttgcatctatattcatcagtaagattgacatgtaattttttatttttatgctgcatttt-ctgggctgagattttggtatcgtattcagtgatttggggagtgttccttattttctggtctctggaagaatatgtgtggttatacagttatttgcttgtttaa--t i aotNan1.NW_018494782v1 I 1175 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e dasNov3.JH569188 651076 2870 + 760995 I e colAng1.NW_012114488v1 15670022 0 - 23502949 C e canFam3.chr1 56226451 371 + 122678785 I a score=400923.000000 s hg38.chr6_KB021644v2_alt 168721 56 + 185823 gattactagaacacatctctaaaaagactttgagccggggagacatttcttttctg s panTro5.chr6 173630885 56 + 175400573 gattactagaacacatctctaaaaagactttgagccggggagatatttcttttctg i panTro5.chr6 C 0 C 0 s panPan2.chr6 171857670 56 + 173848474 gattactagaacacatctctaaaaagactttgagccggggagatatttcttttctg i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11540784 56 - 12463322 gattactagaacacatctctaaaaagactttgagccggggagatatttcttttctg i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156373867 56 + 157873769 gattactagaacacatctctaaaaagactctgagccagggagatatttcttttctg i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170401042 50 + 172585720 ------cagaacacatctctaaaaagactctgagccggggagatagttcttttctg i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169144324 50 - 170955103 ------cagaacacatctctaaaaagactctgagccggggagatagttcttttctg i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8430698 50 + 10161646 ------cagaacacatctctaaaaagactctgagccggggagatatttctttcctg i macNem1.NW_012011000v1 C 0 C 0 s chlSab2.chr13 96746179 56 + 98384682 gattaccagaacacatctctaaaaagactctgagccagggagatatttcttttctg i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8308556 56 - 10857215 gcttaacagaacacatctctaaaaagactctgagccgggGAGATATTTCTTTTCTG i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169955734 54 + 171630274 gattaccagaacacatctctaaaaagactc--ggcctgggaggtatttctttTCTG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1354721 56 - 2905041 gattaccagaacacatctctaaaaagtctctgggcctaggagatatttctttTCTA i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1320073 56 - 2164891 gattaccagaacacatctctaaaaagactctgggcctgggagatatttcttttctg i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1566407 56 - 1813869 gattaccagaacacatctctaaaaagactctgggcctgggagatatttcttttctg i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e dasNov3.JH569188 651076 2870 + 760995 I e colAng1.NW_012114488v1 15670022 0 - 23502949 C e canFam3.chr1 56226451 371 + 122678785 I e cerAty1.NW_012002071v1 1460936 34 + 3144229 I a score=1065188.000000 s hg38.chr6_KB021644v2_alt 168777 139 + 185823 tgtatacacttttaacatttatttccattaatagtcataaagaatattTGGTGAGGACTGAAAGGTGCCGAGGATCTGTCTGAAAACTGAATGCAAAGGACAAAGCGACAGCAGACGGGGCaggcgagacgtgaggcga s panTro5.chr6 173630941 139 + 175400573 tgtatacactttcaacatttatttccattaatagtcataaagaatattTGGTGAGGACTGAAAGGTGCCGAGGATCTGTCTGAAAACTGAATGCAAAGGACAAAGCGACAGCAGACGGGGCAAAGGAGACATGAGGCGA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171857726 139 + 173848474 tgtatacactttcaacatttatttccattaatagtcataaagaatattTGGTGAGGACTGAAAGGTGCTGAGGATCTGTCTGAAAACTGAATGCAAAGGACAAAGCGACAGTAGACGGGGCAGGCGAGACGTGAGGCGA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11540840 139 - 12463322 tgtatacacttttaacatttatttccattaatagtcataaagaatattTGGTGAGGACTGAAAGGTGCCAAGGATCTATCTGAAAACTGAATGCAAAGGACAAAGCGACAGCAGACGTGGCAGGGGAGACATGAGGCGG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156373923 113 + 157873769 tatatacacttttaacatttatttccattaatagtcataAAGAATAT--------------------------ATCTGTCTGAAAACTGAATGCAAAggacaaagtgacagcagacggggcaggggagacgtgagatgg i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170401092 139 + 172585720 tgtatacacttttaacatgtatttccattaatagtcataaagaatattTGGTGAAGATTGAAAGGTGCTGAGGATCTGTCTGAAAACTGAATGCCATGGACAAAGTGACAACACATGGGGCAGAGGAGACGTGAGGCGA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169144374 139 - 170955103 tgtatacacttttaacatgtatttccattaatagtcataaagaatattTGGCGAAGATTGAAAGGTGCTGAGGATCTGTCTGAAAACTGAATGCCATGGACAAAGTGACAACACATGGGGCAGAGGAGACGTGAGGCGA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8430748 139 + 10161646 cgtatacacttttaacatgtatttccattaatagtcataaagAATATTTGGCGAAGATTGAAAGGTGCTGAGGATCTGTCTGAAAACTGAATGCCATGGACAAAGTGACAACACATGGGGCAGAGGAGACGTGAGGCGA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1460970 139 + 3144229 TGTATACACTTTTAACATGTATTTCCATTAATAGTCATAAAGAATATTTGGTGAAGATTGAAAGGTGCCGAGGATCTGTCTGAAAACTGAATGCCATGGACAAAGTGACAACACACGGGGCAGAGGAGACGTGAGGCGA i cerAty1.NW_012002071v1 I 34 C 0 s chlSab2.chr13 96746235 139 + 98384682 tgtatgtacttttaacatgtatttccattaatagtcataaagaatattTGGCGAGGATTGAAAGGTGCCGAGGATCTGTCTGAAAACTGAATGCAATGGACAAAGTGACAACACATGGGGCAGGGGAGACATGAGGCGA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8308612 139 - 10857215 TGTATACACTTTTAACATGTATTTCCATTAATAGTCATAAAGAACATTTGGCGAAGATTGAAAGGTACCGAGGATCTGTCTGAAAACTGAATGCCATGGACAAAGTGACAACACACGGGGCAGAGGAGACATGAGGCGA i manLeu1.NW_012106474v1 C 0 I 9 s calJac3.chr4 169955788 137 + 171630274 TGTATGCACTTTTAACGTTTATTTCCATTAATGATCAT-AAGAGCATTTGGTGAGGGTTGAA-GGTGCCAAGGATCTGTCTGAAAAGTTAATGCCAAGGATGAAGTGACAGCAGACCCAGCAGGGGAGAGGTGAAGCGA i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1354777 138 - 2905041 TGTATGTACTTTTAACATTTATTTCCATTGATGGTCATAAAGAGTATTTGGTGAGGTTTGAAGGGTGCCAAGGATCTGTCTGAAAACTTAATGCAAAGGATGAAGCGACAGCAGA-CCAGCATGGGAGAGGTGAGGTGA i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1320129 139 - 2164891 tgtatgcacttttaacatttatttccattaatggtcataaagagtattTGGTGAGGGTTGAAGGGTGCCAAGGATCTGTCTGAAAACTCAATGCAAAGGATGAAGCGACAGCAGACCCAGCAGTGGGGAGGTGAGGTGA i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1566463 139 - 1813869 tgtatgcacttttaacatttatttccattaatggtcataaagagtattTGGTGAGGGCTGAAGGGTGCCAAGGATCTGTCTGAAAACTTAATGCAAAGGATGAAGCGACAGCAGACCCAGCAGGggagaggtgaggtga i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e dasNov3.JH569188 651076 2870 + 760995 I e colAng1.NW_012114488v1 15670022 0 - 23502949 C e canFam3.chr1 56226451 371 + 122678785 I a score=3600.000000 s hg38.chr6_KB021644v2_alt 168916 1 + 185823 g s panTro5.chr6 173631080 1 + 175400573 G i panTro5.chr6 C 0 I 1452 s panPan2.chr6 171857865 1 + 173848474 G i panPan2.chr6 C 0 I 51 s gorGor5.CYUI01015032v1 11540979 1 - 12463322 G i gorGor5.CYUI01015032v1 C 0 I 37 s nomLeu3.chr3 156374036 1 + 157873769 g i nomLeu3.chr3 C 0 I 9 s calJac3.chr4 169955925 1 + 171630274 G i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1354915 1 - 2905041 G i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1320268 1 - 2164891 G i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1566602 1 - 1813869 g i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e dasNov3.JH569188 651076 2870 + 760995 I e colAng1.NW_012114488v1 15670022 0 - 23502949 C e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96746374 0 + 98384682 C e cerAty1.NW_012002071v1 1461109 0 + 3144229 C e manLeu1.NW_012106474v1 8308751 9 - 10857215 I e macNem1.NW_012011000v1 8430887 0 + 10161646 C e rheMac8.chr4 170401231 0 + 172585720 C e macFas5.chr4 169144513 0 - 170955103 C a score=-8473.000000 s hg38.chr6_KB021644v2_alt 168917 3 + 185823 acg--- s panPan2.chr6 171857917 3 + 173848474 ACG--- i panPan2.chr6 I 51 C 0 s gorGor5.CYUI01015032v1 11541017 3 - 12463322 GCG--- i gorGor5.CYUI01015032v1 I 37 C 0 s nomLeu3.chr3 156374046 3 + 157873769 atg--- i nomLeu3.chr3 I 9 C 0 s calJac3.chr4 169955926 3 + 171630274 --GCG- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1354916 2 - 2905041 --GC-- i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1320269 2 - 2164891 --GC-- i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1566603 3 - 1813869 --gc-g i aotNan1.NW_018494782v1 C 0 I 56 e otoGar3.GL873575 10988881 3627 - 12073884 I e dasNov3.JH569188 651076 2870 + 760995 I e colAng1.NW_012114488v1 15670022 0 - 23502949 C e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96746374 0 + 98384682 C e cerAty1.NW_012002071v1 1461109 0 + 3144229 C e manLeu1.NW_012106474v1 8308751 9 - 10857215 I e macNem1.NW_012011000v1 8430887 0 + 10161646 C e rheMac8.chr4 170401231 0 + 172585720 C e macFas5.chr4 169144513 0 - 170955103 C e panTro5.chr6 173631081 1452 + 175400573 I a score=-5871.000000 s hg38.chr6_KB021644v2_alt 168920 10 + 185823 tg--aggcg---------agc s panPan2.chr6 171857920 19 + 173848474 TG--AGGCGGGGCAGGGGAGA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11541020 12 - 12463322 TGGCAGGCG---------CGA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156374049 19 + 157873769 tg--agGCAAGGCAGGGGAGA i nomLeu3.chr3 C 0 C 0 s calJac3.chr4 169955929 4 + 171630274 ----GGGC------------- i calJac3.chr4 C 0 I 4 s saiBol1.JH378287 1354918 4 - 2905041 ----GGGC------------- i saiBol1.JH378287 C 0 I 4 s cebCap1.NW_016107695v1 1320271 4 - 2164891 ----GGGC------------- i cebCap1.NW_016107695v1 C 0 I 43 e otoGar3.GL873575 10988881 3627 - 12073884 I e aotNan1.NW_018494782v1 1566606 56 - 1813869 I e dasNov3.JH569188 651076 2870 + 760995 I e colAng1.NW_012114488v1 15670022 0 - 23502949 C e canFam3.chr1 56226451 371 + 122678785 I e chlSab2.chr13 96746374 0 + 98384682 C e cerAty1.NW_012002071v1 1461109 0 + 3144229 C e manLeu1.NW_012106474v1 8308751 9 - 10857215 I e macNem1.NW_012011000v1 8430887 0 + 10161646 C e rheMac8.chr4 170401231 0 + 172585720 C e macFas5.chr4 169144513 0 - 170955103 C e panTro5.chr6 173631081 1452 + 175400573 I a score=-110.000000 s hg38.chr6_KB021644v2_alt 168930 10 + 185823 cgtgaggcaa s panPan2.chr6 171857939 10 + 173848474 CGTGAGGCGA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11541032 10 - 12463322 CGTGAGGCGA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156374068 10 + 157873769 CGTGAGGCGA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170401231 9 + 172585720 CACCGGGCA- i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169144513 9 - 170955103 CACCGGGCA- i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8430887 9 + 10161646 CACTGGGCA- i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1461109 9 + 3144229 CGCCGGGCA- i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96746374 9 + 98384682 CGCCAGGCA- i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169955937 6 + 171630274 CCTGTG---- i calJac3.chr4 I 4 C 0 s saiBol1.JH378287 1354926 6 - 2905041 CCTGTG---- i saiBol1.JH378287 I 4 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e aotNan1.NW_018494782v1 1566606 56 - 1813869 I e cebCap1.NW_016107695v1 1320275 43 - 2164891 I e dasNov3.JH569188 651076 2870 + 760995 I e colAng1.NW_012114488v1 15670022 0 - 23502949 C e canFam3.chr1 56226451 371 + 122678785 I e manLeu1.NW_012106474v1 8308751 9 - 10857215 I e panTro5.chr6 173631081 1452 + 175400573 I a score=26656.000000 s hg38.chr6_KB021644v2_alt 168940 9 + 185823 gccgGCTCA s panPan2.chr6 171857949 9 + 173848474 GCCGGCTCA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11541042 9 - 12463322 CCCGGCTCA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156374078 9 + 157873769 GCCGGCTCG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170401240 9 + 172585720 GCCTGTTCG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169144522 9 - 170955103 GCCTGTTCG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8430896 9 + 10161646 GCCTGTTCG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1461118 9 + 3144229 GCCTGCTCA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96746383 9 + 98384682 GCCTGCTCG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8308760 9 - 10857215 GCCTGCTCA i manLeu1.NW_012106474v1 I 9 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e saiBol1.JH378287 1354932 0 - 2905041 C e aotNan1.NW_018494782v1 1566606 56 - 1813869 I e cebCap1.NW_016107695v1 1320275 43 - 2164891 I e calJac3.chr4 169955943 0 + 171630274 C e dasNov3.JH569188 651076 2870 + 760995 I e colAng1.NW_012114488v1 15670022 0 - 23502949 C e canFam3.chr1 56226451 371 + 122678785 I e panTro5.chr6 173631081 1452 + 175400573 I a score=181800.000000 s hg38.chr6_KB021644v2_alt 168949 32 + 185823 TAAACGCTCCTAACGGGGAAAACAGACGAACG s panPan2.chr6 171857958 32 + 173848474 TAAACGCTCCTAACGGGGAAAACAGACGAATG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11541051 32 - 12463322 TAAACGCTCCTAACGGGGAAAACAGACGAATG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156374087 32 + 157873769 TAAACGCTCCTAACGGGGAAAACAGACGAATG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170401249 32 + 172585720 TAAATGCTCCTAAAGGGGAAAACAGAGGAATG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169144531 32 - 170955103 TAAATGCTCCTAAAGGGGAAAACAGAGGAATG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8430905 32 + 10161646 TAAATGCTCCTAAAGGGGAAGACAGAGGAATG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1461127 32 + 3144229 TAAATGCTCCTAAAGGGGAAAACAGAGGAATG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96746392 32 + 98384682 TAAATGCTCCTCAAGGGGAAAACAGAGGAATG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8308769 32 - 10857215 TAAATGCTCCTAAAGGGGAAAACAGAGGAATG i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169955943 32 + 171630274 TAAACGCTCCCAGTGGGGAAAACAGATGAAGA i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1354932 32 - 2905041 TCAATACTCCCAGCGGGGAAAGCAGATGAAGA i saiBol1.JH378287 C 0 C 0 s aotNan1.NW_018494782v1 1566662 32 - 1813869 TAAACGCCCCCAGCGGGGAAAACAGATGAAGA i aotNan1.NW_018494782v1 I 56 I 1 e otoGar3.GL873575 10988881 3627 - 12073884 I e cebCap1.NW_016107695v1 1320275 43 - 2164891 I e dasNov3.JH569188 651076 2870 + 760995 I e colAng1.NW_012114488v1 15670022 0 - 23502949 C e canFam3.chr1 56226451 371 + 122678785 I e panTro5.chr6 173631081 1452 + 175400573 I a score=534847.000000 s hg38.chr6_KB021644v2_alt 168981 81 + 185823 A-GG------AGTTGGTGATAATATCAGCCAGTAACACCTGTTAAGGCTTCCTGGCTCCCAGGCACTTGAGAACTATACTTCTCCAAa s panPan2.chr6 171857990 82 + 173848474 AAGG------AGTTGGTGATAATATCAGCCACTAACACCTGTTAAGGCTTCATGGCTCCCAGGCACTTGAGAAGTAtacttctccaaa i panPan2.chr6 C 0 I 4 s gorGor5.CYUI01015032v1 11541083 82 - 12463322 AAGG------AGTTGGTGATAATATCAGCCACTAACACCTGTTAAGGCTTCATGGCTCCCAGGCACTTGAGAAGTATATTTCTCCAAA i gorGor5.CYUI01015032v1 C 0 I 4 s nomLeu3.chr3 156374119 82 + 157873769 AAGG------AGCTGGTGATAATATCAGCCACTAACACCTGTTAAGGCTTCGTGGCTCCCAGGTGCTTGAGAAGTAtacttctccaaa i nomLeu3.chr3 C 0 I 4 s rheMac8.chr4 170401281 82 + 172585720 AAGG------AGCTACTGATAATATCAACCACTAACACCTGTTAAGGCTTCATGGCTCTCAGGCACTTGAGAAGTAtacttctccaaa i rheMac8.chr4 C 0 I 4 s macFas5.chr4 169144563 82 - 170955103 AAGG------AGCTACTGATAATATCAACCACTAACACCTGTTAAGGCTTCATGGCTCTCAGGCACTTGAGAAGTATACTTCTCCAAA i macFas5.chr4 C 0 I 4 s macNem1.NW_012011000v1 8430937 82 + 10161646 AAGG------AGCTACTGATAATATCAACCACTAACACCTGTTAAGGCTTCAtggctctcaggcacttgagaagtatacttctccaaa i macNem1.NW_012011000v1 C 0 I 4 s cerAty1.NW_012002071v1 1461159 82 + 3144229 AAGG------AGCTAGTGATAATATCAACCACTAACACCTATTAAGACTTCATGGCTCTCAGGCGCTTGAGAAGTACACTTCTCCAAA i cerAty1.NW_012002071v1 C 0 I 4 s chlSab2.chr13 96746424 82 + 98384682 AAGG------AGCTACTGATAATATCAACCACTAACACCTATTAAGGCTTCATGGCTCTCAGGCGCTTGAGAAGTATACTTCTCCAAA i chlSab2.chr13 C 0 I 4 s manLeu1.NW_012106474v1 8308801 82 - 10857215 AAGG------AGCTAGTGATAATATCAACCACTAACACCTATTAAGACTTCATGGCTCTCAGGCGCTTGAGAAGTAtacttctccaaa i manLeu1.NW_012106474v1 C 0 I 4 s calJac3.chr4 169955975 81 + 171630274 -CAG------GGAGAGTCATCATGCCAACCACTGACCCCTGCTAAGGCTTCATGGCTCCCAGACACTGGAGAAGGATACTTCCCCAGA i calJac3.chr4 C 0 I 4 s saiBol1.JH378287 1354964 87 - 2905041 -GAGCACTCCTGAGAGTGCTCATGTCGACCACTGACACCTGCTAAGGCTTTATGGCTCCCAGGCGCTTGAGAAGTATACTTCCCCAGA i saiBol1.JH378287 C 0 I 4 s cebCap1.NW_016107695v1 1320318 81 - 2164891 -AGG------AGAGAGTGCTCATGTCAACCACTAACACCTGCTAAGGCTTCAGGGCTCCCAGGTGCTTGAGAACTACACTTCCCCAGA i cebCap1.NW_016107695v1 I 43 I 4 s aotNan1.NW_018494782v1 1566695 81 - 1813869 -AGG------AGAGAGTGATCATGTCAACCACTAACACCTGCTAAGGCTTCATGGCTCCCCGGTGGTTGAGAAGCATACTTCCCCAGA i aotNan1.NW_018494782v1 I 1 I 17 e otoGar3.GL873575 10988881 3627 - 12073884 I e dasNov3.JH569188 651076 2870 + 760995 I e colAng1.NW_012114488v1 15670022 0 - 23502949 C e canFam3.chr1 56226451 371 + 122678785 I e panTro5.chr6 173631081 1452 + 175400573 I a score=227686.000000 s hg38.chr6_KB021644v2_alt 169062 31 + 185823 ttaggttggttctgttatcttccttctacag s panTro5.chr6 173632533 31 + 175400573 TTaggttggttctgttatcttccttctacag i panTro5.chr6 I 1452 C 0 s panPan2.chr6 171858076 31 + 173848474 ttaggttggttctgttatcttccttctacag i panPan2.chr6 I 4 C 0 s gorGor5.CYUI01015032v1 11541169 31 - 12463322 TTaggttggttctgttatcttctttctacag i gorGor5.CYUI01015032v1 I 4 C 0 s nomLeu3.chr3 156374205 31 + 157873769 ttaggttggttctgttatcttccttctacag i nomLeu3.chr3 I 4 C 0 s rheMac8.chr4 170401367 31 + 172585720 ttaggtcggtgctgttatcttccttctacag i rheMac8.chr4 I 4 C 0 s macFas5.chr4 169144649 31 - 170955103 TTaggttggtgctgttatcttccttctacag i macFas5.chr4 I 4 C 0 s macNem1.NW_012011000v1 8431023 31 + 10161646 ttaggttggtgctgttatcttccttctacag i macNem1.NW_012011000v1 I 4 C 0 s cerAty1.NW_012002071v1 1461245 31 + 3144229 TTaggttggtgctgttatcttccttctacag i cerAty1.NW_012002071v1 I 4 C 0 s chlSab2.chr13 96746510 31 + 98384682 TTaggttggtgctgttatcttccttctacag i chlSab2.chr13 I 4 C 0 s manLeu1.NW_012106474v1 8308887 31 - 10857215 ttaggttggtgctgttatcttacttctacag i manLeu1.NW_012106474v1 I 4 C 0 s calJac3.chr4 169956060 31 + 171630274 Ttaggtgcgtgctgttgtccttcttctacag i calJac3.chr4 I 4 C 0 s saiBol1.JH378287 1355055 31 - 2905041 Ttaggtgtgtgctgttgtctttcttctacag i saiBol1.JH378287 I 4 C 0 s cebCap1.NW_016107695v1 1320403 31 - 2164891 Ttaggtacgtgctgttgtctttcttctacag i cebCap1.NW_016107695v1 I 4 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e aotNan1.NW_018494782v1 1566776 17 - 1813869 I e dasNov3.JH569188 651076 2870 + 760995 I e colAng1.NW_012114488v1 15670022 0 - 23502949 C e canFam3.chr1 56226451 371 + 122678785 I a score=222482.000000 s hg38.chr6_KB021644v2_alt 169093 29 + 185823 atagggaaactgaggcatggcgcatttaa s panTro5.chr6 173632564 28 + 175400573 atagggaaactgaggcatggc-catttaa i panTro5.chr6 C 0 C 0 s panPan2.chr6 171858107 29 + 173848474 atagggaaactgaggcatggcgcatttaa i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11541200 29 - 12463322 atagggaaactgaggcatggcgcatttaa i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156374236 29 + 157873769 acagggaaactgaggcatggtgcgtttaa i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170401398 26 + 172585720 atagggaaactgaggcatggtgcgtt--- i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169144680 26 - 170955103 atagggaaactgaggcatggtgcgtt--- i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8431054 26 + 10161646 atagggaaactgaggcatggtgcgtt--- i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1461276 26 + 3144229 atagggaaactgaggcatggtgcgtt--- i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96746541 29 + 98384682 atagggaaactgaggcatggtgcatttaa i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8308918 29 - 10857215 atagggaaactgaggcatggtgcatttaa i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169956091 29 + 171630274 ataggaaaactgaggcatggCACATTTAA i calJac3.chr4 C 0 I 297 s saiBol1.JH378287 1355086 29 - 2905041 atagggaaactgaggcatggtacatttaa i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1320434 29 - 2164891 atagggaaactgagacatggcacatttaa i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1566793 29 - 1813869 atagggaaactgaggcatggcacatttaa i aotNan1.NW_018494782v1 I 17 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e dasNov3.JH569188 651076 2870 + 760995 I e colAng1.NW_012114488v1 15670022 0 - 23502949 C e canFam3.chr1 56226451 371 + 122678785 I a score=23814.000000 s hg38.chr6_KB021644v2_alt 169122 4 + 185823 ctaa s panTro5.chr6 173632592 4 + 175400573 ctaa i panTro5.chr6 C 0 C 0 s panPan2.chr6 171858136 4 + 173848474 ctaa i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11541229 4 - 12463322 ctaa i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156374265 4 + 157873769 ctaa i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170401424 3 + 172585720 -taa i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169144706 3 - 170955103 -taa i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8431080 3 + 10161646 -taa i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1461302 3 + 3144229 -taa i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96746570 4 + 98384682 ctaa i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8308947 4 - 10857215 ctaa i manLeu1.NW_012106474v1 C 0 C 0 s saiBol1.JH378287 1355115 4 - 2905041 ctaa i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1320463 4 - 2164891 ctaa i cebCap1.NW_016107695v1 C 0 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e aotNan1.NW_018494782v1 1566822 0 - 1813869 C e calJac3.chr4 169956120 297 + 171630274 I e dasNov3.JH569188 651076 2870 + 760995 I e colAng1.NW_012114488v1 15670022 0 - 23502949 C e canFam3.chr1 56226451 371 + 122678785 I a score=982442.000000 s hg38.chr6_KB021644v2_alt 169126 116 + 185823 gaggtcttggatcccacagtccttagtggtggagccgggatttaaaaccaggcaacctgacaccccagcgggtgctgtcaacTCTGTCTCACGTTTTTTACTGAGGGTGTCTGTGC s panTro5.chr6 173632596 116 + 175400573 gaggtcttggatcccacagtccttagtggtggagccgggatttaaaaccaggcaacctgacaccccagcgggtgctgtcaacTCTGTCTCACGTGTTTTACTGAGGGTGCCTGTGC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171858140 116 + 173848474 gaggtcttggatcccacagtccttagtggtggagccgggatttaaaaccaggcaacctgacaccccagcgggtgctgtcaacTCTGTCTCACGTGTTTTACTGAGGGTGCCTGTGC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11541233 116 - 12463322 gaggtcttggatcccacagtccttagtggtggagctgggatttaaaaccaggcaacctgacaccccagcgggtgctgtcaacTCTGTCTCACGTTTTTTACTGAGGGTGCCTGTGC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156374269 116 + 157873769 gaggtcttggatcccacagtccttagtggtggagccgggatttaaaaccaggcaacctgacaccccagcgggtgctctcaacTCTGTCTCACGTTTTTTACCGAGGGTGCCTGTGC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170401427 116 + 172585720 gaggttttggatcccacagtccttagcggtggagccgggatttaaaagcaggcaacctgacaccccagcgggtgctcttaacTCTGTCTCACATTTTTTACCGAGGGTTCCTGTGC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169144709 116 - 170955103 gaggttttggatcccacagtccttagcggtggagccgggatttaaaagcaggcaacctgacaccccagcgggtgctcttaacTCTGTCTCACATTTTTTACCGAGGGTTCCTGTGC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8431083 116 + 10161646 gaggttttggatcccacagtccttagcggtggagccgggatttaaaagcaggcaacctgacaccccagcgggtgctcttaacTCTGTCTCACATTTTTTACTGAGGGTTCCTGTGC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1461305 116 + 3144229 gaggttttggatcccacagtccttagtggtggagccgggatttaaaaccaggcaacctgacaccccagcgggtgctcttaacTCTGTCTCACATTTTTTACCGAGGGTTCCTGTGC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96746574 116 + 98384682 gaggtcttggatcccacagtccttagtggtggagctgggatttaaaaccaggcaacctgacaccgcagtgggtgctcttaacTCTGTCTCACATTTTTTACCGAGGGTGCCTGTGC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8308951 116 - 10857215 gaggtcttggatcccacagtccttagcggtggagccgggatttaaaaccaggcaacctgacaccccagcgggtgctcttaacTCTGTCTCACATTTTTTACCGAGGGTTCCTGTGC i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169956417 116 + 171630274 gagctttcagatcacatggtccttagtggtggatccggaatttaaaaccaggcatcttgacaccccagcgggtgctcttaCCTGTGTCTCCTGTTGTTTACCGAGGGTGCCTGTGC i calJac3.chr4 I 297 C 0 s saiBol1.JH378287 1355119 116 - 2905041 cagctcttggatcatacagtccttagtggtggagccaggatttaaaaccgggcaacttgtcaccccagcgggtgcttttaactaTGTCTCCTGTTGTTTACTGAGGGTGCCTGTGC i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1320467 116 - 2164891 gagatcttggatcacagagtccttagtggtggagccgggatttaaaaccaggcaacttgacaccccagcaggtgctgttaacTGTGTCTCCTGTTGTTTACTGAGGGTGCCCGTGA i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1566822 116 - 1813869 gagctcttggatcacacagcccttagtggtggagccaggatttaaagccaggcaacttgacaccccagtgggtgctcttaacTGTGTCACGTGTTGTTTACCGAGGGTGCCTGTGC i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e dasNov3.JH569188 651076 2870 + 760995 I e colAng1.NW_012114488v1 15670022 0 - 23502949 C e canFam3.chr1 56226451 371 + 122678785 I a score=4144266.000000 s hg38.chr6_KB021644v2_alt 169242 502 + 185823 CCAGCATGCTTCAGGAGGTCACTCCCTGGTGCTGAAGGAAGGCACAGGCCTTCGGGGATCAGTAAGTGACGGGC-AGTATGTACATGTCATAGCACAC-GCCTGTGTATAGTCTTGTGAATTTCAAAGCATCCAGGATGAAGTTA--GGGAGCCAGAGGGAA-GGAACAAAATTCCAACTGCTTTCAGAAAGAAAGGCGCTAACTCAAAAAGCAGCAAGCAGCGAGCAGCAGTGATCAGGTTGGCATGAAATTGTATTGG--TTGTTGCAT--CCTGGAGGCAGTGGGGTTAGATGTGTA-AAGATCGGAGGAACGGTGACAGGTACCCCTGGCTTGCCAAACTCTTTCACTGTCTGAACTCAAGAA-CCAAACAGATTTGGATTTCTTGGTATTGCCCAATAGCAAACTGGC-TATCAG-GTTCCAATTACACTCACATTcttc-atccacaga-----caccagaaac--tcttgtgt-------------------ccaaaaaattaaatttatttaactttctgagacaaggaagagt s panTro5.chr6 173632712 489 + 175400573 CCAGCATGCTTCAGGAGGTCACTCCCTGGTGCTGAAGGAAGGCACAGGCCTTCGGGGATCAGTAAGTGACCGGC-AGTATGTACATGTCATAGCACAC-GCCTGTGTACAGTCTTGTGAATTTCAAAGCATCCAGGATGAAGTTA--GGGAGCCAGAGGGAA-GGAACAAAATTCCAGCTGCTTTCAGAAAGAAAGACACTAACTCAAAAAGCAGCG--------------GTGATCAGGTTGGCATGAAATTGTATTGG--TTGTTGCAT--CCTGGAGGCAGTGGGGTTAGATGTGTATAAGATCGGAGGAACGGTGACAGGTACCCCTGGCTTGCCAAACTCTTTCACTGTCTGAACTCAAGAA-CCAAACAGATTTGGATTTCATGGTATTGCCCAATAGCAGACTGGC-TATCAG-GTTCCAATTACACTCACATTcttc-atccacaga-----caccagaaac--acttgtgt-------------------ccaaaacattaaatttatttaactttctgagacaaggaagagc i panTro5.chr6 C 0 C 0 s panPan2.chr6 171858256 485 + 173848474 CCAGCATGCTTCAGGAGGTCACTCCCTGGTGCTGAAGGAAGGCACAGGCCTTCGGGGATCAGTAAGTGACCGGC-AGTATGTACATGTCATAGCACAC-GCCTGTGTACAGTCTTGTGAATTTCAAAGCATCCAGGATGAAGTTA--GGGAGCCAGAGGGAA-GGAACAAAATTCCAGCTGCTTTCAGAAAGAAAGACACTAACTCAAAAAGCAGCG--------------GTGATCAGGTTGGCATGAAATTGTATTGG--TTGTTGCAT--CCTGGAGGCAGTGGGGTTAGATGTGTATGAGATCGGAGGAACGGTGACAGGTACCCCTGGCTTGCCAAACTCTTTCACTGTCTGAACTCAAGAA-CCAAACAGATTTGGAATTCATGGTATTGCCCAATAGCAAACTGGC-TATCAG-GTTCCAATTACACTCACATTcttc-atccacaga-----caccagaaac--acttgtgt-------------------ccaaaacattaaatttatttaactttctgagac----aagagc i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11541349 489 - 12463322 CCAGCATGCTTCAGGAGGTCACTCCCTGGTGCTGAAGGAAGGCACAGGCCTTCGGGGATCAGTAAGTGACCGGC-AGTATGTACATGTCATAGCACAC-GCCTGTGTACAGTCTTGTGAATTTCAAAGCATCCAGGATGAAGTTA--GGGAGCCGGAGGGAA-GGAACAAAATTCCAGCTGCTTTCAGAAAGAAAGACACTAACTCAAAAAGCAGCG--------------GTGATCAGGTTGGCATGAAATTGTATTGG--TTGTTGCAT--CCTGGAGGTAGTGGGGTTAGAAGTGTGTAAGATCGGAGGAACGGTGACAGGTACCCCTGGCTTGCCAAACTCTTTCACTGTCTGAACTCAAGAA-CCAAACAGATTTGGAATTCATGGTATTGCCCCATAGCAAACTGGC-TATCAG-GTTCCAATTACACTCACATTcttc-atccacaga-----caccagaaac--acttgtgt-------------------ccaaaaaattaaatttatttaactttctgagacaaggaagagc i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156374385 488 + 157873769 CCAGCACACTTCAGGAGGTCACtccctggtgctgaaggaaggcacaggccttcggggatcagtaagtgaccggc-agtaggtacatgtcgtagcacac-gcctgtgtacagtcttgtgaatttcaaagcatccaggatgaagtta--gggagccagagggaa-ggaacaaaattccaactgctttcagaaagaaagacactaactcaaaaagcagcg--------------gtgatcaggttggcatgaaattgttttgg--ttgttgcat--cctggaggcagtggggttagatgtgta-aagatcggaggaaCGGTGACAGACACCCCTGGCTTGCCAAACACTTTCACTGTCTGAACTCAAGAA-CCAAACAGATTTGGATTTCATGGTATTGCCCAATAGCAAACTGGC-TATCAG-ATTCCAATTACACTCACATTcttc-atccacaga-----caccagaaac--acttgtgt-------------------ccaaaaaattaaatttatttaactttctgagacaagtaagagt i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170401543 489 + 172585720 CCACCAAGCTTCAGGAAGTCACTCCCTGGTGCTGAAAGAAGGCACAGGCCTTCGGGGATCAGTAAGTGACTGGC-AGTATGTACATGTAGTAGTACAT-GCCTGCGTACAGTCTTGTGAATTTCAAAGCATCCAGGATGAAGTTA--GGGAACCAGAGGGAA-TGAACAAAATTCCAAATGCTTTCAGAAAGAAAGACACTAACTCAAAAAGCAGCA--------------GTAATCAGGTTGGCATGAAATTGTGTTGG--TTGTTGCAT--CCTGGAGGCAGTGGGGTTAGATGTGTA-AAGATGTGAGGAACAGTGACAGGCACCCCCGGCTTGCCAAACACTTTCACTGTCTGAACTCAAGAA-CCAAACAGATCTGGATTTCATGGTATTGCCCGAGAGCAAACTGGC-TACCAG-GTTCCAATTACACTCACgttcttc-atccaaagac----catcaggaac--acttgtgt-------------------ccaaaaagttagatttatttaattttctgagacaagtaagagt i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169144825 489 - 170955103 CCACCAAGCTTCAGGAAGTCACTCCCTGGTGCTGAAAGAAGGCACAGGCCTTCGGGGATCAGTAAGTGACTGGC-AGTATGTACATGTAGTAGTACAT-GCCTGCGTACAGTCTTGTGAATTTCAAAGCATCCAGGATGAAGTTA--GGGAACCAGAGGGAA-TGAACAAAATTCCAACTGCTTTCAGAAAGAAAGACACTAACTCAAAAAGCAGCA--------------GTAATCAGGTTGGCATGAAATTGTGTTGG--TTGTTGCAT--CCTGGAGGCAGTGGGGTTAGATGTGTA-AAGATGTGAGGAACAGTGACAGGCACCCCCGGCTTGCCAAACACTTTCACTGTCTGAACTCAAGAA-CCAAACAGATCTGGATTTCATGGTATTGCCCGAGAGCAAACTGGC-TACCAG-GTTCCAATTACACTCACgttcttc-atccaaagac----catcaggaac--acttgtgt-------------------ccaaaaagttagatttatttaattttctgagacaagcaagagt i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8431199 489 + 10161646 CCACCAACCTTCAGGAAGTCACTCCCTGGTGCTGAAAGAAGGCACAGGCCTTCGGGGATCAGTAAGTGACTGGC-AGTATGTACATGTAGTAGTACAT-GCCTGCATACAGTCTTGTGAATTTCAAAGCATCCAGGATGAAGTTA--GGGAACCAGAGGGAA-TGAACAAAATTCCAACTGCTTTCAGAAAGAAAGACACTAACTCAAAAAGCAGCA--------------GTAATCAGGTTGGCATGAAATTGTGTTGG--TTGTTGCAT--CCTGGAGGCAGTGGGGTTAGATGTGTA-AAGATGTGAGGAACGGTGACAGGCACCCCCGGCTTGCCAAACACTTTCACTGTCTGAACTCAAGAA-CCAAACAGATCTGGATTTCATGGTATTGGCCGAGAGCAAACTGGC-TACCAG-GTTCCAATTACACTCacgttcttc-atccaaagac----catcaggaac--acttgtgt-------------------ccaaaaagttagatttatttatttttctgagacaagcaagagt i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1461421 489 + 3144229 CCAGCACGCTTCAGGAAGTCACTCCCTGGTGCTGAAAGAAGGCACAGGCCTTCGGGGATCAGTAAGTGGCTGGC-AGTATGCACATGTAGTAGTACAT-GCCTGCGTACAGTCTTGTGAATTTCAAAGCATCCAGGATGAAGTTA--GGGAACCAGAGGGAA-TGAACAAAATTCCAACTGCTTTCAGAAAGAAAGACACTAACTCAAAAAGCAGCA--------------GTAATCAGGTTGGCATGAAATTGTGTTGG--TTGTTGCAT--CCTGGAGGCAGTGGGGTTAGATGTGTA-AAGATGTGAGGAACGGTGACAGGCACCCCCGGCTTGCCAAACACTTTCACTGTCTGAACTCAAGAA-CCAAACAGATCTGGATTTCATGGTATTGCCCGAGAGCAAACTGGC-TACCAG-GTTCCAATTACACTCACgttcttc-atccaaagac----caccaggaac--gcttgtgt-------------------ctaaaaagttagatttatttaactttctgagacaagcaagagt i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96746690 489 + 98384682 CCAGCAGGCTTCAGGAGGTCACTCCCTGGTGCTGAAAGAAGGCACAGGCCTTCGGAGATCAGTAAGTAACTGGC-AGTATGTACATGTAGTAGCACAT-GCCTGCATACAGTCTTGTGAATTTCAAAGCATCCAGGATAAAGTTA--GGGAACCAGAGCGAA-TGAACAAAATTCCAAATGCTTTCAGAAAGAAAGACACTAACTCAAAAAGCAGCA--------------GTAATCAGGTTGGCATGAAATTGTGTTGG--TTGTTGCAT--CCTGGAGGCAGTGGGGTTAGATGTGTA-AAGATGTGAGGAACGGTGACAGGCACCCCCGGCTTGCCAAACACTTTCACTGTCTGAACTCAAGAA-CCAAACAGATCTGGATTTCATGGTATTGCCCAAGAGCAAACTGGC-TACCGG-GTTCCAATTACACTCACgttcttc-atccaaagac----caccaggaac--acttgtgt-------------------ccaaaaagttagatttatttaactttctgagacaagcaagagt i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8309067 489 - 10857215 CCACCAAGCTTCAGGAAGTCACTCCCTGGTGCTGAAAGAAGGCACAGGCCTTTGGAGATCAGTAAGTGACTGGC-AGTATGTACATGTAGTAGCACAT-GCCTGCGTACAGTCTTGTGAATTTCAAAGCATCCAGGATGAAGTTA--GGGAACCAGAGGGAA-TGAACAAAATTCCAAACGCTTTCAGAAAGAAAGACACTAACTCAAAAAGCAGCA--------------GTAATCAGGTTGGCATGAAATTGTGTTGG--TTGTTGCAT--CCTGGAGGCAGTGGGGTTAGACGTGTA-AAGATGTGAGGAACGGTGACAGGCTCCCCCGGCTTGCCAAACGCTTTCACCGTCTGAACTCAAGAA-CCAAACAGATCTGGATTTCATGGTATTGCCCAAGAGCAAACTGGC-TACCAG-GTTCCAATTACACTCatgttcttc-atccaaagac----caccaggaac--acttgtgt-------------------ccaaaaagttagatttatttaactttctgagacaagcaagagt i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169956533 483 + 171630274 CCAGCACGCTTCAGGAGGTCACTCCCTG-------AAGGACGCACAGGCCTTCGGGGCTCAGTCAGTGACATGC-AGCATGTACATGTGCTAGCGCAT-GCT--GGTCCAGTCTTGTGAATTTCAAAGCATCCAGGATAAAGTTA--GGGAGCCAGAGGGAA-TGAAGAAAATTCCAAATACTTTCAGAAAAAAAGACACGAACTCAAAAAGCAGCG--------------GTGATCAGCCTGGCACGAAACCTTCTTGG--TTGCTGCAC--CCTGGGGGCAGTGGGGTTCGAGGTGGG-GAGATCGGAGGAACTGTGACAGGCAGCCCCGGCATGCCAGACACTTTCACTGTCTGAACTCAAGAA-ACCAGCACATCTGGATTTCGTGGAATTGCCCAAAAGCAAACTGGCTTGTCAG-GTTCCAATTACACTCACATTcttc-attcaaagac----caccagaaacacacttgtat-------------------caaaaaagtcaggtttatttaactttctgagacagggaatagt i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1355235 481 - 2905041 CCAGCACGCTTCAGGAGGTCCCTCCCTG-------AAGGAAGCACAGGCCTTCGGGGCTCAGTAAGTGACCAGC-CGTATGTACATGTGCTAGCACAT-GCCTGGGTACAGTCTTGTGAATTGCAAAGCAACCACGATAAAGTTA--GGAAACCAGAGGGAA-TGTAGAAAATTCCAAATGCTTTCAGAAAAAAAGACACGAACTCAAAAAGCAGCG--------------GTGATCAGGCTGGCGTGAAAC---CTTGG--TTGCTGCAT--TCTGGAGGCAGTGGGGTTTGGGGTGGG-GAGATTGGGGGAGCCGAGACAGGCAGCCCTGGCATGCCAAACACTTTCACTGTCTGAACTCAAGAA-ACCAGCAGATCTGGATTGCGTGGTATTGCCCAAAAGCCAACCGGC-TGTCAG-GTTCCAATTACACTCACATTcttc-attcaaagac----caccagaaacacacttgtat-------------------caaaaaagtcaggtttatttaactttctgagacaaggaagaGT i saiBol1.JH378287 C 0 M 778 s cebCap1.NW_016107695v1 1320583 484 - 2164891 CCAGCACGCTTCAGGAGGTCACTCCCTG-------AAGGAAGCACAGGCCTTCAGGGCTCAGTAAGTGACCAGC-AGTATGTACATGTGCCAGCACAT-GCCTGGGTACAGTCTTGTGAATTTCAAAGCATCCAGGATAAAGTTA--GGGAGCCAGAGGGAA-TGAAGAAAATTCCAAATGCTTTCAGAAAAAAAGACACAAACTCAAAAATCAGCG--------------GTGATCAGGCTGGCGTGAAACCTTCTTGG--CTGCTGCAT--CCTGGAGGCAGTGGGGTTCGAGGTGGG-GAGATCAGAGGAACCGTGACAGGCAGCCCTTGCATGCCAAACACTTTCACTGTCTGAACTCAAGAA-ACCAGCAGATCTGGATTTCATGGTATTGCCCAAGAGCAAACTGGC-TGTCAG-GTTCCAATTACACTCACATTcttc-attcaaagac----taccagaaacacacttgaat-------------------caaaaaagtcaggtttatttaactttctgagacaaggaagagt i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1566938 481 - 1813869 CCAGCATGCTTC---AGGTCACTCCCTG-------GAGTAAGCACAGGCCTTCGGGGCTTAGTGAGTGACCAGC-AGTATGTACGTGTGCTAGCACAT-GCCTGGGTACAGTCTTGTGAATTTTAAAGCATCCAGGATAAAGTTA--GGGAGCCAGAGGGAA-TGAAGAAAATTCCAAATGCTTTCAGAAAAAAAGACACGAACTCAAAAAGCAGCG--------------GTGATCAGGCTGGCGTGAACCCTTCTTTG--TTGCTGCAT--CCTGGAGGCGGTGGGGTTTGAGGTGGG-GAGATGGGAGGAACCGTGACAGACAGCCCTGGCATGCCAAACACTTTCACTGTCTGAACTCAAGAA-ACCAGCAGATCTGGATTTCGTGGTATTGCCCCAAAGCAAACTGGC-TGTCAG-GTTCCAATGACACTCACATTcttc-attcaaagac----caccagaaacagagttgtat-------------------caaaaaagtcaggtttatttaactttctgagacaaggaagagt i aotNan1.NW_018494782v1 C 0 C 0 s dasNov3.JH569188 653946 519 + 760995 ccagcacattttgggaaaacattccttggcaatgaaagaaagtaatgttctatggggaccattgaatgacaggtaaagatgtatatgtaataacacctaacctagacacaaccttgtgaacttcaagatatctagaatgaatctactgggagtcagcaagaattttaaaaaatcctaaattatcttggaaagaaacagattgccttaaaataaatca---------------tagt--gaattgcctgagattttattgaccttgttacattcccaagagacaatggagttatatcttga-aagatacgtggaacaattaCGGGTATCCCTTGCT--ATAGAAACTTTTACTATCTGAACTCAGGAACCCAAACAGATTCATATTATTTGGTATTCCCCAATATCAAACTGGC-TATCAGCACTCCGA--ACTGTCATGCCCCCCTGTCCAAAGACAAAGAAACAAAAACAAACCTATACGAATGTGGtaaaaaaataattaaataattaattaGATTTAACTTTCTGAAAGCaagaagaat i dasNov3.JH569188 I 2870 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e colAng1.NW_012114488v1 15670022 0 - 23502949 C e canFam3.chr1 56226451 371 + 122678785 I a score=637403.000000 s hg38.chr6_KB021644v2_alt 169744 82 + 185823 ggaattaaaatgaaccaggaaaccctttcaataaggggg-agttaagaggggcttctgataggataggggcttgtgctaggtg s panTro5.chr6 173633201 82 + 175400573 ggaattaaaatgaaccaggaaaccctttcaataaggggg-agttaagaggggcttctgataggataggggcttgtgctaggtg i panTro5.chr6 C 0 C 0 s panPan2.chr6 171858741 82 + 173848474 ggaattaaaatgaaccaggaaaccctttcaataaggggg-agttaagaggggcttctgataggataggggcttgtgctaggtg i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11541838 82 - 12463322 ggaattaaaatgaaccaggaaaccctttcaataaggggg-agttaagaggggcttctgataggataagggcttgtgctaggtg i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156374873 82 + 157873769 ggaattaaaatgaaccacgaaaccctttcaaaaaggggg-agttaagaggggcttctgataggataggggcttgtgctaggtg i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170402032 82 + 172585720 ggaattaaaatgaaccaggaaaccctttcaataaggggg-agttaagaggggcttctgaaagcatgggggcttgtgctaggtg i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169145314 82 - 170955103 ggaattaaaatgaaccaggaaaccctttcaataaggggg-agttaagaggggcttctgaaagcatgggggcttgtgctaggtg i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8431688 82 + 10161646 ggaattaaaatgaaccgggaaaccctttcaataaggggg-agttaagaggggcttctgaaagcatgggggcttgtgctaggtg i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1461910 82 + 3144229 ggaattaaaatgaaccaggaaaccctttcaatcaggggg-agttaagaggggcttctgaaagcatgggggcttgtgctaggtg i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96747179 82 + 98384682 ggaattaaaatgaaccaggaaaccctttcaataaggggg-agttaagaggggcttctgaaagcatgggggcttgtgctaggtg i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8309556 82 - 10857215 ggaattaaaatgaaccaggaaaccctttcaataaggggg-agttaagaggggcttctgaaagcatgggggcttgtgctaggtg i manLeu1.NW_012106474v1 C 0 I 1237 s calJac3.chr4 169957016 82 + 171630274 ggaattaaaatgaaccagaaaactctttcagtaagggggcagtgaagaggggcttctgatggcat-ggggcttgtgctagatg i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1321067 82 - 2164891 ggaattaaagtgaaccagaaaaccctttcagtaaggggggagttaagaggggcttctgatggcac-ggggcttgtgctagacg i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1567419 82 - 1813869 ggaattaaaatgaaccagaaaaccctttcagtcaggggggagttaagaggggcttctgatggcac-ggggcttgtgctagatg i aotNan1.NW_018494782v1 C 0 C 0 s dasNov3.JH569188 654465 68 + 760995 gcaaccaaattgcaccatgagaccccctcactgagggga-gatt--------------ttaggatttgggactgtgttagatg i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e saiBol1.JH378287 1355716 778 - 2905041 M e colAng1.NW_012114488v1 15670022 0 - 23502949 C e canFam3.chr1 56226451 371 + 122678785 I a score=191645.000000 s hg38.chr6_KB021644v2_alt 169826 27 + 185823 atcccaaggagagattaaggagagggg s panTro5.chr6 173633283 27 + 175400573 atcccaaggagagattaaggagagggg i panTro5.chr6 C 0 C 0 s panPan2.chr6 171858823 27 + 173848474 atcccaaggagagattaaggagagggg i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11541920 27 - 12463322 atcccaaggagagattaaggagagggg i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156374955 27 + 157873769 atcccaaggagagattaaggagagagg i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170402114 27 + 172585720 attccaaagagagattaaggaGAGGGG i rheMac8.chr4 C 0 I 214 s macFas5.chr4 169145396 27 - 170955103 attccaaagagagattaaggaGAGGGG i macFas5.chr4 C 0 I 214 s macNem1.NW_012011000v1 8431770 27 + 10161646 attccaaagagagattaaggagagggg i macNem1.NW_012011000v1 C 0 I 214 s cerAty1.NW_012002071v1 1461992 27 + 3144229 attccaaagagagattaaggaGAGGAG i cerAty1.NW_012002071v1 C 0 I 127 s chlSab2.chr13 96747261 27 + 98384682 attctaaagagagattaaggaGAGGGG i chlSab2.chr13 C 0 I 127 s manLeu1.NW_012106474v1 8310875 26 - 10857215 ATCCCAAAGAGAGATTAAGGAGAGGG- i manLeu1.NW_012106474v1 I 1237 C 0 s calJac3.chr4 169957098 26 + 171630274 atcccaaggagagGAT-AGGAGAGGGC i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1321149 26 - 2164891 atccccaggagagatc-aggagagggc i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1567501 26 - 1813869 atcccaaggagagatt-aggagagggc i aotNan1.NW_018494782v1 C 0 C 0 s dasNov3.JH569188 654533 27 + 760995 gttctaaggcgaggataaggagacaag i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e saiBol1.JH378287 1355716 778 - 2905041 M e colAng1.NW_012114488v1 15670022 0 - 23502949 C e canFam3.chr1 56226451 371 + 122678785 I a score=457351.000000 s hg38.chr6_KB021644v2_alt 169853 79 + 185823 agcCAATGCTTGATGG--------------GTGAAGATA--------------TCTTCATGCATTTCGTCCTGAGAGGGGAGATTCAAGAGGGGCGCGCGTGGCCAC s panTro5.chr6 173633310 79 + 175400573 agcCAATGCTTGATGG--------------GTGAAGATA--------------TCTTCATACATTTCGTCCTGAGAGGGGAGATTCGAGAGGGGCGTGCGTGGCCAC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171858850 79 + 173848474 agcCAATGCTTGATGG--------------GTGAAGATA--------------TCTTCATACATTTCGTCCTGAGAGGGGAGATTCGAGAGGGGCGCGCGTGGGCAC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11541947 79 - 12463322 agcCAATGCTTGATGG--------------GTGAAGATA--------------TCTTCATACATTTCGTCCTGAGAGGGGAGATTCGAGTGGGGCGCGCGCGGCCAC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156374982 79 + 157873769 agcCAATGCTTGATGG--------------GTAAAGATA--------------CCTTCATACATTTCGTCCTGAGAGGGGAGATTCGAGTGGGGCGTGCGTGGCCAC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170402355 78 + 172585720 AGCCAATGCTGGATGG--------------ATGAAGATA--------------CCGTCATACATGTCGTCCCGAGAGGGGAGATTCAAGT-GGGCGCATGTGGGCAC i rheMac8.chr4 I 214 C 0 s macFas5.chr4 169145637 78 - 170955103 AGCCAATGCTGGATGG--------------ATGAAGATA--------------CCGTCATACATGTCGTCCCGAGAGGGGAGATTCAAGT-GGGCGCATGTGGGCAC i macFas5.chr4 I 214 C 0 s macNem1.NW_012011000v1 8432011 78 + 10161646 AGCCAATGCTGGATGG--------------ATGAAGATA--------------CCGTCATACATGTCGTCCCGAGAGGGGAGATTCAAGT-GGGCGCATGTGGGCAC i macNem1.NW_012011000v1 I 214 C 0 s cerAty1.NW_012002071v1 1462146 78 + 3144229 AGCCAATGCTGGATGG--------------ATGAAGATA--------------CCATCATACATGTCATCCCGAGAGGGGAGATTCAAGT-GGGCGCATGTGGGCAC i cerAty1.NW_012002071v1 I 127 C 0 s chlSab2.chr13 96747415 78 + 98384682 AGCCAATGCTGGATGG--------------ATGAAGATA--------------CCGTCATACATGTAGTCCCGAGAGGGGAGATTCAAGT-GGGCGTGTGTGGGCAC i chlSab2.chr13 I 127 C 0 s manLeu1.NW_012106474v1 8310901 78 - 10857215 AGCCAATGCTGGATGG--------------ATGAAGATA--------------CCGTCATACATGTCGTCCGGAGAGGGGAGATTCAAGT-GGGCGCATGTGGGCAC i manLeu1.NW_012106474v1 C 0 C 0 s calJac3.chr4 169957124 73 + 171630274 AGCCCGTGGCTGATGG--------------GTGA-GATA--------------CCGTTGTACATTTGGTCCTGAGCCGGGAGATTCGAGT-GGG-GCGCGCGGC--- i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1321175 76 - 2164891 ggcCAGTGGCTGATGG--------------GTGAGGATA--------------CCGTCATACATTT-GTCCTGAGCCGGGAGATTCGAGT-GGG-GTGCGTGGCCAC i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1567527 75 - 1813869 agc--agggctGATGG--------------GTGAGGATA--------------CCGTCATACATTTGGTCCTGAGCTGGGAGATTTGGGT-GGG-GCGCGTGACCAC i aotNan1.NW_018494782v1 C 0 C 0 s dasNov3.JH569188 654560 107 + 760995 ccacaattctggattggccgctgtcaagaagtggggataattagtgatcagagcattaatacatttaattttgagcctggagatgaaagtgcagctggagttgccat i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e saiBol1.JH378287 1355716 778 - 2905041 M e colAng1.NW_012114488v1 15670022 0 - 23502949 C e canFam3.chr1 56226451 371 + 122678785 I a score=2954119.000000 s hg38.chr6_KB021644v2_alt 169932 372 + 185823 GGATGAAGTGTCAGGCGTCCCTGTTAGTCCAAG---GGGGCTGCAGGGTGGTGTCTG---ATGTGTGGTGGGTTTGCCTCCCTCCTGCTCCAGGCCCTGCCGCGGTGTGGTCTCAGCTCAGCATCGCTGCTGCCCTCTGAGCCTGGCTGGTCC----TCAATTAGGAACAGCAAGATCTGGCTGTCGGCAGAGCATTTCCT--CTTTCTGAAAATCCAGGGTTTTC--ACAGACTCAGACACCACAG------TTTCTGCCTCAAATTCAGGCAAATTGGTTTGGCAG-AAAAAACATATAAAATGTAAATTTGCATTCTT-TCTTTATAGTATT--TTCTCTTTGTTTCAGATAG-GAATAGA-AGCCCTTTGTGATTTATTGATTTAGAGGG-----tttt s panTro5.chr6 173633389 368 + 175400573 GGATGAAGTGGCAGGCGTCCCTGTTAGTCTAAG---GGGGCTGCAGGGTGGTGTCTG---ATGTGTGGTGGGTTTGCCTCCCTCCTGCTCCAGGCCCTGCCGCGGTGTGGTCTCAGCTCAGCATCGCTGCTGCCCTCTGAGCCTGGCTGGTCC----TCAATTAGGAACAGCAAGATCTGGCTGTCGGCAGAGCATTTCCT--CTTTCTGAAAATCCAGGGGTTAC--ACAGACTCAGACACCACAG------TTTCTGCCTCAAATTCAGGCAAATTGGTTTGGCAG-AAAAAACATATAAAATGTAAATTTGCATTCTT-TCTTTATAGTATT--TTCTCTTTGTTTCAGATAG-GAATAGA-AGCCCTTTGTGATTTATT----TAGAGGG-----TTTT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171858929 367 + 173848474 GGATGAAGTGGCAGGCGTCCCTGTTAGTCTAAG---GGGGCTGCAGGGTGGTGTCTG---ATGTGTGGTGGGTTTGCCTCCCTCCTGCTCCAGGCCCTGCCGCGGTGTGGTCTCAGCTCAGCATCGCTGCTGCCCTCTGAGCCTGGCTGGTCC----TCAATTAGGAACAGCAAGATCTGGCTGTCGGCAGAGCATTTCCT--CTTTCTGAAAATCCAGGGGTTAC--ACAGACTCAGACACCACAG------TTTCTGCCTCAAATTCAGGCAAATTGGTTTGGCAG-AAAAAACATATAAAATGTAAATTTGCATTCTT-TCTTTATAGTATT--TTCTCATTGTTTCAGATAG-GAATAGA-AGCCCTTTGTGATTTATT----TAGAGGG------TTT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11542026 373 - 12463322 GGATGAAGTGGCAGGCGTCCCTGTTAGTCCAAG---GGGGCTGCAGGGTGGTGTCTG---ATGTGTGGTGGGTTTGTCTCCCTCCTGCTCCAGGCCCTGCCGCGGTGTGGTCTCAGCTCAGCATCGCTGCTGCCCTCTGAGCCTGGCTGGTCC----TCAATTAGGAACAGCAAGATCTGGCTGTTGGCAGAGCATTTCCT--CTTTCTGAAAATCCAGGGGTTAC--ACAGACTCAGACACCACAG------TTTCTGCCTCAAATTCAGGCAAATTGGTTTGGCAG-AAAAAACATATAAAATGTAAATTTGCATTCTT-TCTTTATAGTATT--TTCTCTTTGTTTCAGATAG-GAATAGA-AGCCCTTTGTGATTTATT----TAGAGGGttttttttt i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156375061 363 + 157873769 GGATGAAGTAGCAGGCGTCCCTGTTAGTCCGAG---GGGGCTGCAGGGTGGTGTCTG---ACGTGTGGTGGGTTTTCCTCGCTCCTGCTTCAGGCCCTGCTGCGGTGTGGTCTCAGCTCAGCATCGCTGCTGCCCTCTGAGCCTGGCTGGTCC----TC----AGGAACAGCAAGTTCTGGCTGTCGGCAGAGCATTTCCT--CTTTCTGAAAATCCAGGGGTTAC--ACAGACTCAGACACCACAG------TTTCTGCCTTGAATTCAGGCAAATTGATTTGGCAG-TAAAAACATATAAAATGTAAATTTGCA----T-TCTTTATAGTATT--TTCTCTTCGTTTCAGATAG-GAATAGA-AGCCCCTTGTCATTTATTGATTTAGAGGG------TTT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170402433 364 + 172585720 AGATGAAGTGGCAGGTGTCCCTGTTAGTCCGA----GGGGCTGCATGGTGGTATCTG---ATATGTGGTGGGATTGCCTCCCTCCTGCTCCAGGCCCCGCTGCAGTGTGGTCTCAGCTCAGCATCACTGCTGCCCTCTGAGCCTGGCTGGTCC----TC----AGGAACAGCAAGATCTGGCTGTCGGCAGAGTCTTTCCT--CTTTCCGAAAACCCAGGGGTTAC--ACAGACTCAGACACCACAG------TTTCTGCCTCGGATTCAGGCAAATTGGTTTGGCAG-AAAAAACATACAAAATGTAAATTTGCATTCTT---TTTATAGTATT--TTCTCTTAGTTTCAGATAG-GAATAGA-AGCCATTTGTCATTTATTGATTTAGAGGG------TTT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169145715 364 - 170955103 GGATGAAGTGGCAGGTGTCCCTGTTAGTCCGA----GGGGCTGCATGGTGGTATCTG---ATATGTGGTGGGATTGCCTCCCTCCTGCTCCAGGCCCCGCTGCAGTGTGGTCTCAGCTCAGCATCACTGCTGCCCTCTGAGCCTGGCTGGTCC----TC----AGGAACAGCAAGATCTGGCTGTCGGCAGAGTCTTTCCT--CTTTCCGAAAACCCAGGGGTTAC--ACAGACTCAGACACCACAG------TTTCTGCCTCGGATTCAGGCAAATTGGTTTGGCAG-AAAAAACATACAAAATGTAAATTTGCATTCTT---TTTATAGTATT--TTCTCTTAGTTTCAGATAG-GAATAGA-AGCCATTTGTCATTTATTGATTTAGAGGG------TTT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8432089 365 + 10161646 GGATGAAGTGGCAGGTGTCCCTGTTAGTCCGA----GGGGCTGCATGGTGGTATCTG---ATATGTGGTGGGATTGCCTCCCTCCTGCTCCAGGCCCCGCTGCAGTGTGGTCTCAGCTCAGCATCACTGCTGCCCTCTGAGCCTGGCTGGTCC----TC----AGGAACAGCAAGATCTGGCTGTCGGCAGAGTCTTTCCT--CTTTCCGAAAACCCAGGGGTTAC--ACAGACTCAGACACCACAG------TTTCTGCCTCAGATTCAGGCAAATTGGTTTGGCAG-AAAAAACATACAAAATGTAAATTTGCATTCTT---TTTATAGTATT--TTCTCTTAGTTTCAGATAG-GAATAGA-AGCCATTTGTCATTTATTGATTTAGAGGG-----TTTT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1462224 369 + 3144229 GGATGAAGTGGCAGGTGTCCCTGTTAGTCCGA----GGGGCTGCATGGTGGTATCTG---ATATGTGGTGGGATTGCCTCTCTCCTGCTCCAGGCCCCGCTGCAGTGTGGTCTCAGCTCAGCATCACTGCTGCCCTCTGAGCCTGGCTGGTCC----TCAGTTAGGAACAGCAAGATCCGGCTGTCGGCAGAGTCTTTCCT--CTTTCCGAAAACCCAGGGGTTAC--ACAGACTCAGACAC--CAG------TTTCTGCCTCGGATTCAGGCAAATTGGTTTGGCAG-AAAAAACATACAAAATGTAAATTTGCATTCTT-TCTTTATAGTATT--TTCTCTTAGTTTCATATAG-GAATAGA-AGCCATTTGTCATTTATTGATTTAGAGGG-----TTTT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96747493 370 + 98384682 GGATGAAGTGGCAGGTGTCCCTCTTAGTCCGA----GGGGCTGCATGGTGGTATCTG---ATATGTGGTGGGTTTGCCTCTCCCCTGCTCCAGGCCCCGCTGCAGTGTGGTCTCAGCTCAGCATCACTGCTGCCCTCTGAGCCTGGCTGGTCCTCAGTC----AGGAACAGCAAGATCTGGCTGTCGGCAGAGTCTTTCCT--CTTTCTGAAAATCCAGAGGTTAC--ACAGACTCAGACACCACAG------TTTCTGCCTTGGATTCAGGCAAATTGGTTTGGCAG-AAAAAACATACAAAATGTAAATTTGCATTCTT-TCTTTATAGTATT--TTCTCTTAGTTTCAGATAG-GAATAGA-AGCCATTTGTCATTTATTGATTTAGAGGG------TTT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8310979 366 - 10857215 GGATGAAGTGGCAGGTGTCCCTGTCAGTCCGA----AGGGCTGCATGGTGGTATCTG---ATATGTGGTGGGTTTGCCTCCCTCCTGCTGCAGGCCCCGCTGCAGTGTGGTCTCAGCTCAGCATCACTGCTGCCCTCTGAGCCTGGCTGGTCC----TC----AGGAGCAGCAAGATCCGGCTGTCGGCAGAGTCTTTCCT--CTTTCCGAAAACCCAGGGCTTAC--ACAGACTCAGACACCACAG------TTTCTGCCTCGGATTCAGGCAAATTGGTTTGGCAG-AAAAAACATACAAAATGTAAATTTGCATTCTT-TCCTTATAGTACT--TTCTCTTAGTTTCAGATAG-GAATAGA-AGCCATTTGTCATTTATTGATTTAGAGGG------TTT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15670022 371 - 23502949 GGATGAAGTGGCAGGTGTCCCTGTTAGTCGGA----GGGGCTGCATGGTGGTGTCTG---ATAGGTGCTGGGTTTGCCTCCCTCCTGCTCCAGGCCCTGCTGCAGTGTGGTCTCAGCTCAGCATCACTGCTGCCCTCTGAGCCTGGCTGGTCC----TTAGTTAGGAACAGCAAGATCTGGCTGTCGGCAGAGTCTTTCCT--CTTTCTGAAAATCCAGGGTTTAC--ACAGACTCAGACACCACAG------TTTCTGCCTCGGATTCAGGCAAATTGGTTTGGCAGAAAAAAACGTACAAAATGTAAATTTGCATTCTT-TCTTTATAGTATT--TTCTCTTAGTTTCAGATAG-GAAGAGA-AGCCATTTGTCATTTATTGATTTAGAGGG------TTT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169957197 338 + 171630274 ----------------------------CCGA----GGGGCTGCAGGGCGGC-TCTG---AAGTGTGGTGGGCTTCCCTCCCTCCTGCTGTAGGCGCTGC-GCAGTGTGGTTTCACGTCAGCGTCACTGCTGCCCTGAGGTCCTGGCTTGTCC----TC----AGGAACAGCAAGATCTGGCTGTCGGCAGGGCCTTTCCTAAGTTTCTCAAAATCCAGAGGCTGC--ACAGATTCAGACACCATAG------TTTCTGCCTCGAATTCGGGGAAATTGGTTTGGCAG-AAGAAACACTTAAAATGTAACTTTGCATTGTT-CCTTTACAGCCTT--TCCTCTTAGTTTCAGATGG-GAGTAGA-AGCTCTTAGTCACTGATTGATTTAGAGGG------GGT i calJac3.chr4 C 0 I 722 s cebCap1.NW_016107695v1 1321251 373 - 2164891 GGATGAAGCGGCAGGCGTCCCTGTTAGTCCGT----GGGGCTGCAGGGAGGAGTCTG---ACATGCGGTGGGCTTGCCTCCCTCTTGCGGTAAGCGCTGC-GCAGTGCGGTCTCACCTCAGCATCACTGCTGCCCTGAGACCCTGGCTTGTCC----TCAGTTAGGAACAGCAAGATGTGGCTGTTGGCAGGGCTTTTCCTAACTTTCTCAAAATCCAGTGGTTAC--ACAGATTCAGACACCACAG------TTTCCGCCTCGAATTCGGGGAAATTAGTTTGGCAG-AAGAAACACATAAAATGTAAATTTGCATAGTT-CCTTTATAGCATT--TTCTCTTAGTTTCAGATGGAAAACAGAGAAATCTTAGTCACTGATTGATTTAGAGGG------GTT i cebCap1.NW_016107695v1 C 0 I 1 s aotNan1.NW_018494782v1 1567602 371 - 1813869 GGATGAAGTGGCAGGCGTTCCTGCTAGTCCAA----GGGGATGCAGGGCGGTGTCTG---ACGTGCGGCGGGCTGGCCTCCCTCTTGCTGTAGGCACTGC-GCAGTGCGGTCTCACGTCAGCATCACTGCTGCCCTGAGATCCTGGCTTGTCC----TGAGTTAGGAACAGCAAGATCTGGCTGTCGGCAGGGCCTTGCCTAACTTTCTCAAAATCCAGGGGTTAC--ACAGATTCAGACACCACAG------TTTCTGCCTCGAACTCGGGGAAATTGGTTTGGCAG-AAGAAACACATAAAATGTAAATTTGCATTGTT-CCTTTATAGCATT--GTCTCTTAGTTTCACGTGG-GAGTAGA-GGCTCTTAGTCACTGATTGATTTAGAGGG------GGT i aotNan1.NW_018494782v1 C 0 C 0 s dasNov3.JH569188 654667 382 + 760995 tggtaaggcaata-acgctcatcttagtcaaggagaggggctattaggtcacattttggcatatggaggggacttgtctctctcttggcccacacatggttgctgaatgaccttgcgttagcattgcttcagtactgttggcattgtttatgc----tcatttagaaacatcaaattctgtctgCCAGCTGTTTTGTTTTT--TTTTTTTTAAAGCCAGGAGTTACATATATATGTAGATAAAATGGTAAGTATTTCTATCCAGAATCGAGGCAAAGTGGTGCAGCAG-CAGAAATTTGTGAAATATAAACTTGCATTTTTTTCTTTGTGGTTTTCACTTTCACAGTTACCGATGG-GAGTCCA-GGACTTTTGCAATTGCCTCCTTTAAAG----------- i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e saiBol1.JH378287 1355716 778 - 2905041 M e canFam3.chr1 56226451 371 + 122678785 I a score=1400756.000000 s hg38.chr6_KB021644v2_alt 170304 166 + 185823 ttttgt---tttttgtttgttttCAAGACAGAAAATAACTTGTGGTTTCAGCC----TAAGACTAGGCCTGGTAAAGAGTTTATGCTC---ATGACTTagaggcagagggaagggaagaagatggtgcc-aaggaaggagaaaggaagaggaaATCTTCCTGTAGATGAAAATGAAG---- s panTro5.chr6 173633757 166 + 175400573 TTTTGT---TTTCTGTTTGTTTTCAAGACAGAAAATAACTTGTGGTTTCAGCC----TAAGACTAGGCCTGGTAAAGAGTTTATGCTC---ATGACTTagaggcagagggaagggaagaagatggtgcc-aaggaaggagaaaggaagaggaaATCTTCCCGTAGATGAAAATGAAG---- i panTro5.chr6 C 0 C 0 s panPan2.chr6 171859296 166 + 173848474 TTTTGT---TTTCTGTTTGTTTTCAAGACAGAAAATAACTTGTGGTTTCAGCC----TAAGACTAGGCCTGGTAAAGAGTTTATGCTC---ATGACTTagaggcagagggaagggaagaagatggtgcc-aaggaaggagaaaggaagaggaaATCTTCCCGTAGATGAAAATGAAG---- i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11542399 166 - 12463322 ttttgt---tttgtgtttgttttCAAGACAGAAAATAACTTGTGGTTTCAGCC----TAAGACTAGGCCTGGTAAAGAGTTTATGCTC---ATGACTTAGAGGCAGAGGGAAGGGAAGAAGATGGTGCC-AAGGAAGGAGAAAGGAAGAGGAAATCTTCCCGTAGATGAAAATGAAG---- i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156375424 168 + 157873769 TTTTGTTTGTTCCTGTTTG-TTTCAAGACAGAAAATAACTTGTGGTTCCAGCC----TAAGACTAGGCCTAGTAAAGAGTTTATGCTC---ATGACTTagaggcagagggaagggaagaagattgtgtc-aaggaaggagaaaggaagaggaaATCTTCCCATAGATGAAAATGAAG---- i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170402797 166 + 172585720 TTTTGT---TTTCTGTATGTTTTCAAGACAGAAAATAACTTGTGGTTTCAGCC----TAAGACTAGGCCTGGTAAAGAGTTTATGCTC---ATGACTTAGAGGCAGAGGGAAGGGAAGAAGATTGTGTC-AAGGAAGGAGAAAGGAGGTGGAAATCTTCCCATAGATGGAAATGAAG---- i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169146079 166 - 170955103 TTTTGT---TTTCTGTATGTTTTCAAGACAGAAAATAACTTGTGGTTTCAGCC----TAAGACTAGGCCTGGTAAAGAGTTTATGCTC---ATGACTTAGAGGCAGAGGGAAGGGAAGAAGATTGTGTC-AAGGAAGGAGAAAGGAGGTGGAAATCTTCCCATAGATGGAAATGAAG---- i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8432454 166 + 10161646 TTTTGT---TTTCTGTATGTTTTCAAGACAGAAAATAACTTGTGGTTTCAGCC----TAAGACTAGGCCTGGTAAAGAGTTTATGCTC---ATGACTTAGAGGCAGAGGGAAGGGAAGAAGATTGTGTC-AAGGAAGGAGAAAGGAGGTGGAAATCTTCCCATAGATGGAAATGAAG---- i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1462593 166 + 3144229 TTTTGT---TTTCTGTATGTTTTCAAGACAGAAAATAACTTGTGGTTTCAGCC----TAAGACTAGGCCTGGTAAAGAGTTTATGCGC---ATGACTTAGAGGCAGAGGGAAGGGAAGAAGATTGTGTC-AAGGAAGGAGAAAGGAGGAGGAAATCTTCCCATAGATGGAAATGAAG---- i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96747863 166 + 98384682 TTTTGT---TTTCTGTATGTTTTCAAGACAGAAAATAACTTGTGGTTTCAGCC----TAAGACTAGGCCTGGTAAAGAGTTTATGCTC---ATGACTTAGAGGCAGAGGGAAGGGAAGAAGATTGTGTC-AAGGAAGGAGAAAGGAGGAGGAAATCTTCCCATAGATGAAAATGAAG---- i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8311345 166 - 10857215 TTTTGT---TTTCTGTATGTTTTCAAGATGGAAAATAACTTGTGGTTTCAGCC----TAAGACTAGGCCTGGTAAAGAGTTTATGCTC---ATGACTTAGAGGCAGAGGGAAGGGAAGAAGATTGTGTC-AAGGAAGGAGAAAGGAGGAGGAAATCTTCCCATAGATGGAAATGAAG---- i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15670393 166 - 23502949 TTTTGT---TTTCTGTATGTTTTCAAGACAGAAAATAACTTGTGGTTTCAGCC----TAAGACTAGTCCTGTTAAAGAGTTTATGCTC---ATGACTTAGAGGCAGAGGGAAGGGAAGAAGGTTGTGTC-AAGGAAGGAGAAAGGAGGAGGAAATCTTCCCATAGATGAAAGTGAAG---- i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169958257 162 + 171630274 TTTTGT---TTTTTGTTTGTTGT-AAAACAGAAAATCATGTGAGGTTTCAGTC----TAAGAGGAGGCCTGGTAAGGAGCTGATGCTC---ATGCCTCAGAGGCAGAGGCAAGGGATGAAGAATG-GTC--AGGAAGGAGAAAGGGAGAGGAAATCCTCCCATAGA-GAAAATGAAG---- i calJac3.chr4 I 722 C 0 s cebCap1.NW_016107695v1 1321625 160 - 2164891 --TTGT---TTATTGTTTGTTGTCAAGACAGAAAATAACTTGTGGTTTCAGCC----TAAGACGAGACCTCTTAAGGAGCTGATGCTC---ATGACTCAGAGGCAgaaggaagggatgaagaatgtgtc--aggaaggagaaagg--aaggaaATCCTCCCATAGA-GAAAATGAAG---- i cebCap1.NW_016107695v1 I 1 C 0 s aotNan1.NW_018494782v1 1567973 162 - 1813869 TTTTGT---TTTTTGTTTGTTGTCAAGACAGAAAATAACTTGTGGTTTCAGCC----CAAGACGAGGCCTCGTAAGGAGCTGATGCTC---GTGACTCAGAGGCAGAGGGAAGCGATGAAGAATGCATC--AGGAAGGAGAAAGGAAGAGGAAATCCTCCCATAGA-GAAAATGA------ i aotNan1.NW_018494782v1 C 0 C 0 s dasNov3.JH569188 655049 162 + 760995 --------------ATTTTTCTTCAGGTCATAAAAT-ACTTGTTGCTTAAGACTCAGTAAGTCTGGGCTTACGAAAGAGTACTTGTATTAGGTGACTTCCAGGCAGAGGGGAAGGACGAAGCGTGTTTTGGAGGAAGGAGAGAGAA----TAAATCTTTGCGTACAGGAGAGAGGAACGAG i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e saiBol1.JH378287 1355716 778 - 2905041 M e canFam3.chr1 56226451 371 + 122678785 I a score=236633.000000 s hg38.chr6_KB021644v2_alt 170470 25 + 185823 AGAGGTCGGTGATCCTGTGAGTGGG-- s panTro5.chr6 173633923 25 + 175400573 AGAGGTCGGTGATCCTGTGAGTGGG-- i panTro5.chr6 C 0 C 0 s panPan2.chr6 171859462 25 + 173848474 AGAGGTCGGTGATCCTGTGAGTGGG-- i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11542565 25 - 12463322 AGAGGTCGGTGATCCTGTGAGTGGG-- i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156375592 25 + 157873769 AGAGGTCGATGATCCTGTGAGTGGG-- i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170402963 25 + 172585720 AGAAGTCAGTGATCCTGTGAGTGGG-- i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169146245 25 - 170955103 AGAAGTCAGTGATCCTGTGAGTGGG-- i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8432620 25 + 10161646 AGAAGTCAGTGATCCTGTGAGTGGG-- i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1462759 25 + 3144229 AGAAGTCAGTGATCCTGTGAGTGGA-- i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96748029 25 + 98384682 AGAAGTCAGTGATCCTGTGAGTGGG-- i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8311511 25 - 10857215 AGAAGTCAGTGATCCTGTGAGTGGG-- i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15670559 25 - 23502949 AGAAGTCAGTGATCCTGTGAGTGGG-- i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169958419 23 + 171630274 --AGGCCAGTGATCCTCTGAGTGCG-- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1356498 25 - 2905041 AGAGGCCAGTGATCCTCTGAGTATG-- i saiBol1.JH378287 M 778 C 0 s cebCap1.NW_016107695v1 1321785 23 - 2164891 --AGGCCAGTGATCCTCTGAGTAGG-- i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1568135 25 - 1813869 AGAGGCCAGTGATCCTCTGAGTGGG-- i aotNan1.NW_018494782v1 C 0 C 0 s dasNov3.JH569188 655211 27 + 760995 AGGGATCAGGGGTTCCCAGAGCAGTGG i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10988881 3627 - 12073884 I e canFam3.chr1 56226451 371 + 122678785 I a score=22519.000000 s hg38.chr6_KB021644v2_alt 170495 3 + 185823 Cga s panTro5.chr6 173633948 3 + 175400573 Tga i panTro5.chr6 C 0 C 0 s panPan2.chr6 171859487 3 + 173848474 Tga i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11542590 3 - 12463322 Tga i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156375617 3 + 157873769 Cga i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170402988 3 + 172585720 CGA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169146270 3 - 170955103 CGA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8432645 3 + 10161646 CGA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1462784 3 + 3144229 CGA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96748054 3 + 98384682 CGA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8311536 3 - 10857215 TCA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15670584 3 - 23502949 CGA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169958442 3 + 171630274 CAa i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1356523 3 - 2905041 CAa i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1321808 3 - 2164891 CAa i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1568160 3 - 1813869 CAa i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10992508 3 - 12073884 caa i otoGar3.GL873575 I 3627 C 0 s dasNov3.JH569188 655238 3 + 760995 CAG i dasNov3.JH569188 C 0 C 0 e canFam3.chr1 56226451 371 + 122678785 I a score=59925.000000 s hg38.chr6_KB021644v2_alt 170498 6 + 185823 ctggaa s panTro5.chr6 173633951 6 + 175400573 ctggaa i panTro5.chr6 C 0 C 0 s panPan2.chr6 171859490 6 + 173848474 ctggaa i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11542593 6 - 12463322 ctggaa i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156375620 6 + 157873769 ctggaa i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170402991 6 + 172585720 CAAGaa i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169146273 6 - 170955103 CAAGAa i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8432648 6 + 10161646 CAAGaa i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1462787 6 + 3144229 CAAGaa i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96748057 6 + 98384682 CAAGAA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8311539 6 - 10857215 CAGGaa i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15670587 6 - 23502949 CAAGAA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169958445 6 + 171630274 ctggga i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1356526 6 - 2905041 ccggga i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1321811 6 - 2164891 ctggga i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1568163 6 - 1813869 ctggga i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10992511 6 - 12073884 ctggaa i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56226822 6 + 122678785 ctggaa i canFam3.chr1 I 371 C 0 s dasNov3.JH569188 655241 6 + 760995 CTGGGA i dasNov3.JH569188 C 0 I 511 a score=2245396.000000 s hg38.chr6_KB021644v2_alt 170504 214 + 185823 atttcttgagggcagggattatgtctaattcattt------tgcccccaaatagct--aaagaaataaccaaacagagtaagtgtccaatgaatatgtattaa-tgCAAACATTTATGAAAT-GAAGAAGGAAAGAAACAGGATATAGATGAACCCAGATTCATTAAAAAGTGTGTGATCCTGTAATGAGGCAGGTCCTGATAAAAA-CTGAATAACAAAGGAAA-- s panTro5.chr6 173633957 212 + 175400573 atttcttgagggcagggattatgtctaattcattt------tgcccccagatagct--aaagaaataaccaaacagagtaagtgtccaatgaatatgtattaa-TGCAAACATTTATGAAAT-GAAGAAGGAAAGAAAC--GATATAGATGAACCCAGATTCATTAAAAAGTGTGTGATCCTGTAATGAGGCAGGTCCTGATAAAAA-CTGAATAACAAAGGAAA-- i panTro5.chr6 C 0 C 0 s panPan2.chr6 171859496 212 + 173848474 atttcttgagggcagggattatgtctaattcattt------tgcccccagatagct--aaagaaataaccaaacagagtaagtgtccaatgaatatgtattaa-TGCAAACATTTATGAAAT-GAAGAAGGAAAGAAAC--GATATAGATGAACCCAGATTCATTAAAAAGTGTGTGATCCTGTAATGAGGCAGGTCCTGATAAAAA-CTGAATAACAAAGGAAA-- i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11542599 214 - 12463322 atttcttgagggcaaggattatgtctaattcattt------tgcccccaaatagct--aaagaaataaccaaacagagtaagtgtccaatgaatatgtattaa-tGCAAACATTTATGAAAT-GAAGAAGGAAAGAAACAGGATATAGATGAACCCAGATTCATTAAAAAGTGTGTGATCCTGTAATGAGGCAGGTCCTGATAAAAA-CTGAATAACAAAGGAAA-- i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156375626 214 + 157873769 atttcttgagggcagggattatgtctaattcattt------tcccccaaaatagct--aaagaaataaccaaacagagtaagtgtccaatgaatatgtattaa-tgCAAACATTTATGAAAT-GAAGAAGGAAAGAAACAGGATATAGATGAACCCAGATTCATTAAAAAGTGTGTGATCCTGTAATGAGGCAGGTCCTGATAAAAA-CTGAATAACAAAGGAAA-- i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170402997 212 + 172585720 atttcttgagggcagggattatgcctaattcattt------ttccccaaaatagct--aaaaaaaaaaccaaacagagtaagtgttcactgaatatttattaa-tGCAAACATTTATGAAAT-GAAGAAGGAAAGAAACAGGATATAGATGAACCCACATTCATTAAAAAGTGTGTGATCCTGTAATGAGGTAGGTCCTGATAAAAA-CTGAATAATAAAGG--A-- i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169146279 212 - 170955103 atttcttgagggcagggattatgcctaattcattt------ttccccaaaatagct--aaaaaaaaaaccaaacagagtaagtgttcactgaatatttattaa-TGCAAACATTTATGAAAT-GAAGAAGGAAAGAAACAGGATATAGATGAACCCACATTCATTAAAAAGTGTGTGATCCTGTAATGAGGTAGGTCCTGATAAAAA-CTGAATAATAAAGG--A-- i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8432654 214 + 10161646 atttcttgagggcagggattatgcctaattcattt------ttccccaaaatagctaaaaaaaaaaaaccaaacagagtaagtgttcactgaatatttattaa-tGCAAACATTTATGAAAT-GAAGAAGGAAAGAAACAGGATATAGATGAACCCACATTCATTAAAAAGTGTGTGATCCTGTAATGAGGTAGGTCCTGATAAAAA-CTGAATAATAAAGG--A-- i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1462793 212 + 3144229 atttcttgagggcagggattatgcctaattcattt------tcccccaaaatagct--aaagaaataaccaaacagagtaagtgttcactgaatatttattaa-tGCAAACATTTATGAAAT-GAAGAAGGAAAGAAACAGGATATAGATGAACCCACGTTCATTAAAAAGTGTGTGATCCTGTAATGAGGTAGGTCCTGATAAAAA-CTGAATAATAAAGG--A-- i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96748063 211 + 98384682 ATTTCTTGAGGGCAGGGATTATGCCTAATTCA-TT------TCCCCCCAAATAGCT--AAAGAAATAACCAAACAGAGTAAGTATTCACTGAATATTTATTAA-TGCAAACATTTATGAAAT-GAAGAAGGAAAGAAATAGGATATAGATGAACCCACATTCATTAAAAAGTGTGCGATCCTTTAATGAGGTAGGTCCTGATAAAAA-CTGAATAACAAAGG--A-- i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8311545 214 - 10857215 gtttcttgagggcagtgattatgcctaattcattt------tccccccaaatagctaaaaaaaaaaaaccaaacacagtaagtgttcactgaatatttattaa-tGCAAACATTTATGAAAT-GAAGAAGGAAAGAAACAGGATATAGATGAACCCAGATTCATTAAAAAGTGTGTGATCCTGTAACGAGGTAGGTCCTGATAAAAA-CTGAATAATAAAGG--A-- i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15670593 168 - 23502949 ATTTCTTGAGGGCAGGGATTATGCCTA----------------------------------------------------AAGTGTTCACTGAATATTTATTAA-TGCAAACATTTATGAAAT-GAAGAAGGAAAGAAACAGGATATAGATGAACCCACATTCATTAAAAAGTGTGTGATCCTGTAATGAGGCAGGTCCTGATAAAAA-CTGTATAACAAAGG--A-- i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169958451 212 + 171630274 atttcctgagggcagggattatgtctaattcattt------cccccacaaatagct--aaagaaataaagaaacagagtaagtgttcaatgaatatttattaa-tgCAAACATTTATGAAAT-GAAGAAGGAAAGAAACAGGATACAGATTAATCCAGACTCGTTAAGAAATGTGTGATCCTGTAATGAGGTCGGTCCTGATACAAA-CTGAATAACACAGG--A-- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1356532 214 - 2905041 atttcttgagggcagggattatggcgaattcattc---ccacccccccaaatagct--aaagaaataaagaaacagagtaagtgctcaatgaatatttattaa--gcaaacgTTTATGAAAT-GAAGAAGGAAAGAAACAGGATACAGATTAACCCAGATTCATTAAGAAATGTGTGATCCTGTGATGAGGTAGGTCCTGATAACAA-CTGAATACCAGAGG--A-- i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1321817 212 - 2164891 atttcttgatggcagggattatgtctaattcattt------cccccccaaatagct--aaagaaataaagaaacagagtaagtgttcaatgaatatttattaa-tGCAAACATTTATGTAAT-GAAGAAGGAAAGAAACAGGATACAGATTAACCCAGCCTCATTAAGAAATGTGTGATCCTGTAATGAGGTAGGTCCTGATAACAA-CTGAATAACAGAGG--A-- i cebCap1.NW_016107695v1 C 0 I 106 s aotNan1.NW_018494782v1 1568169 217 - 1813869 atttcttgagggcagggattatgtctaattcatttccccccccctcccaaatagct--aaagaaataaagaaacagagtaagtgttcaatgaat-tttattaa-tgCAAACATTCATGAAAT-GAAGAAGGAAAGAAACAAGACACAGATTAACCCAGACTCATTAAGAAATGTGTGGTCCTGTAATGAGGTAGGTCCTGATAAAAA-CTGAGTAACAGAGG--A-- i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10992517 215 - 12073884 atttcttaagggaaaagattatacctaattcattt-----ttgttttcaaatatct--aaatcaatgacc-aacatagtaagtgatccatgaatgtttattaa-tgCAAAATTTCATGAAATAAAAGAAGGAAAGAAACAGAATATAGATTAACTCAGCTTAAGTTAGAAATGTGAGAG-CTGTCATGAGGTAGTTCCTGATAAAAACCTCAGTAACAAAGGGAA-- i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56226828 211 + 122678785 atttcttaagggcagggtttatgtctaatttattt------ttgtttttaatatct--aaagcaataaccagacatagcaagtgttcaatgaatatttagtaaatgCAAA-ATCTGTGGAAT-AGAGAAGGAAAGAAAT--GATCCAGATTAACCCAGATTAAGTGAGGAGTGTGAGATCCTGC-ATGGGGAACATGATGATAGAAA-TTCAATAGAAAAGG--AAA i canFam3.chr1 C 0 C 0 e dasNov3.JH569188 655247 511 + 760995 I a score=525587.000000 s hg38.chr6_KB021644v2_alt 170718 58 + 185823 AAGTATTCCAACACCAAAGTAAAATCTGCAGTTAGAAGCTA----GGAACAGAAACAGGGCC s panTro5.chr6 173634169 58 + 175400573 AAGTATTCCAACACCAAAGTAAAATCTGCAGTCAGAAGCTA----GGAAGAGAAACAGGGCC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171859708 58 + 173848474 AAGTATTCCAACACCAAAGTAAAATCTGCAGTCAGAAGCTA----GGAAGAGAAACAGGGCC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11542813 58 - 12463322 AAGTATTCCAACACCAAAGTAAAATCTGCGGTTAGAAGCTA----GGAAGAGAAACAGGGCC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156375840 58 + 157873769 AAGTATTCCAACACCAAAGTAAAATCTGCAATAAGAAGCTA----GGAAGAGAAACAGGGCC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170403209 58 + 172585720 AAGTATCCCAACACCAAAGTAAAATCTGCAATTAGAAGCTA----GGAAGAGAAACCGGGCC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169146491 58 - 170955103 AAGTATCCCAACACCAAAGTAAAATCTGCAATTAGAAGCTA----GGAAGAGAAACCGGGCC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8432868 58 + 10161646 AAGTATCCCAACACCAAAGTAAAATCTGCAATTAGAAGCTA----GGAAGAGAAACCGGGCC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1463005 58 + 3144229 AAGTATCCCAACACCAAAGTAAAATCTGCAATTAGAAGCTA----GGAAGAGAAACCGGGCC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96748274 58 + 98384682 AAGTATTCCAACACCAAAGTAGAATCTGCAATTAGAAGCTA----GGAAGAGAAACTGGGCC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8311759 58 - 10857215 AAGTATCCCAACACCAAAATAAAATCTGCAATTAGAAGCTA----GGAAGAGAAACCAGGCC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15670761 58 - 23502949 AAGTATTCCAACACCAAAGTAAAATCTGCAATTAGAAGCTA----GGAAGAGAAACCGGTCC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169958663 58 + 171630274 AAGTGTTGCAAAACCGAAGTGAAACCTGCAATCACGAGGTG----AGGAGAGAAACAGGGCC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1356746 57 - 2905041 AAGTGTTCCGAAACCGAAGTGAAACCCGCACCCACGAGATG----GGAAGAG-AACAGGGCC i saiBol1.JH378287 C 0 C 0 s aotNan1.NW_018494782v1 1568386 57 - 1813869 AAGTGTTCCAAAACCAAAGTGAAATCCGCAGTCATGAGATG----AGAAGAG-AAACGGGCC i aotNan1.NW_018494782v1 C 0 I 127 s otoGar3.GL873575 10992732 56 - 12073884 --ATATTCCAAAATCAAAGTAAAATATGTAATTAATAGATA----AGAAGAGAAACAGGGCC i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56227039 60 + 122678785 --TTATTTCAAGACCAAGGTGAAGCATATAACTAATAACTAATAGGTAAGAGAAACAGGGTC i canFam3.chr1 C 0 C 0 e cebCap1.NW_016107695v1 1322029 106 - 2164891 I e dasNov3.JH569188 655247 511 + 760995 I a score=280239.000000 s hg38.chr6_KB021644v2_alt 170776 50 + 185823 AATGCTTAGCTG-CCTTCTTGGGC-TTATCTTCTTTAGTGTAGATGGTTTGG s panTro5.chr6 173634227 48 + 175400573 AATGCTTAGCTG-CCTTCTTGGGC-TTATCTTCTTTAGTGTAGATGGTTT-- i panTro5.chr6 C 0 C 0 s panPan2.chr6 171859766 48 + 173848474 AATGCTTAGCTG-CCTTCTTGGGC-TTATCTTCTTTAGTGTAGATGTTTT-- i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11542871 50 - 12463322 AATGCTTAGCTG-CCTTCTTGGGC-TTATCTTCTTTAGTGCAGACGGCTTGG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156375898 45 + 157873769 AACGCTTAGCTG-CCTTCTTGGGC-TTATCTTCTTT-----AGATGATTTGG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170403267 50 + 172585720 AATGCTTAGCTG-CCTTCTTGCGC-TTATCTTCTATAGTGTACATGGTTTGG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169146549 50 - 170955103 AATGCTTAGCTG-CCTTCTTGCGC-TTATCTTCTATAGTGTACATGGTTTGG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8432926 50 + 10161646 AATGCTTAGCTG-CCTTCTTGCGC-TTATCTTCTATAGTGTACATGGTTTGG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1463063 50 + 3144229 AATGCTTAGCTG-CCTTCTTGCGC-TTATCTTCTATAGTGTACATGGTTTGG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96748332 50 + 98384682 AATGGTTAGATG-CCTTCTTGCGC-TTATCTTCTATAGTGTACATGGTTTGG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8311817 50 - 10857215 AATGCTTAGCTG-CCTTCTTGCGC-TTATCTTCTATAGTGTACATGGTTTGG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15670819 50 - 23502949 AATGCTTAGCTG-CCTTCTTGCAC-TTATCTTCCACAGTGTACATGGTTTGG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169958721 48 + 171630274 -ACACCTCGCGG-GCTCCTTGGGC-TCATCCTCTTTGGAGAACCTTTGCTG- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1356803 48 - 2905041 -ATGCCTCGCTG-GCTCCTTGGGC-TCATCCTCCTTGGGGTACCTTTGCTG- i saiBol1.JH378287 C 0 C 0 s otoGar3.GL873575 10992788 47 - 12073884 AGTGCTAAATTG-TTTTCTTAGGCTTTTTCCCCTTTGGTTTAACTGGT---- i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56227099 41 + 122678785 AATGCCAAATTGTTTTTCTTAGAC-TTAATTTCAGTGATCAG---------- i canFam3.chr1 C 0 C 0 e aotNan1.NW_018494782v1 1568443 127 - 1813869 I e cebCap1.NW_016107695v1 1322029 106 - 2164891 I e dasNov3.JH569188 655247 511 + 760995 I a score=585880.000000 s hg38.chr6_KB021644v2_alt 170826 82 + 185823 AGGTCTTGGACAGGTTCCTGGGAACCACAGTAATCTTGCACCAGCTCT----CACAC----GTGCG-----ATTTGCGAGGGGGTC--TGTGCCTGC s panTro5.chr6 173634275 66 + 175400573 ----------------CCTGGGAACTGCAGTAATCTGGCACCAGCTCT----CACAC----GTGCG-----ATTTGCGAGGGGGTC--TGTGCCTGC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171859814 66 + 173848474 ----------------CCTGGGAACTGCAGTAATCTGGCACCAGCTCT----CACAC----GTGCG-----ATTTGCGAGGGGGTC--TGTGCCTGC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11542921 82 - 12463322 AGGTCTTCGATAGGTTCCTGGGAACTACAGTGATCTGGCACCAGCTCT----CACAC----TTGCA-----ATTTGCGAGGGGGTC--TCTGCCTGC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156375943 82 + 157873769 AGGTCTTGGACAGGTTCCTGGGAACTACAGTAATCCGGCGCCAGCTCT----CGCAC----GTGCG-----ATTTGCGAGGGGGTC--TGTGCCGGC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170403317 82 + 172585720 GGGTCTTGGACAGGTTCCTGGGAACCACAGTAATCTGGTGCCAGCTCT----CACAC----GTGCA-----ATTTGCAAGGGGGTC--TGTGCTTGC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169146599 82 - 170955103 GGGTCTTGGACAGGTTCCTGGGAACCACAGTAATCTGGTGCCAGCTCT----CACAC----GTGCA-----ATTTGCAAGGGGGTC--TGTGCTTGC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8432976 82 + 10161646 GGGGCTTGGACAGGTTCCTGGGAACCACAGTAATCTGGTGCCAGCTCT----CACGC----GTGCA-----ATTTGCAAGGGGGTC--TGTGCTTGC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1463113 82 + 3144229 GGGTCTTGGACAGGTTCCTGGGAACTACAGTAATCTGGCACCAGCTCT----CACAC----GTGCA-----ATTTGCAAGGGGGTC--TGTGCTTGC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96748382 82 + 98384682 GGGTCTTGGACAGGTTCCTGGGAACTACAGTAATCTGGTGCCAGCTCT----CACAC----GTGCA-----ATTTGCAAGGGGGTC--TGTGCTTGC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8311867 82 - 10857215 GGGTCTTGGACAGGTTCCTGGGAACTACAGTAATCTGGCACCAGCTCT----CACAC----GTACA-----ATTTGCAAGGGGGTC--TGTGCTTGC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15670869 82 - 23502949 GGGTCTTGGACAGGTCCCTAGGAACTACAGTAATCTGGCGCCAGCTCT----CACAC----GTGCA-----ATTTGCAAGGGGGTC--TGTGCTTGC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169958769 80 + 171630274 AGGTCCTGGACAGGTTGGCAGGAACCACGGTCATCCGGCGCCCCCAAT----CACAC----GTGGG------TTTGCAAGGGGGTT--TCTGCTTG- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1356851 80 - 2905041 AGGTCCTGGACAGGTTCGCAGGAACCACGGTCATCTGGCGCCCGCTCT----CACAC----GTGCA------TTTGCAAGGGGGTT--TCTGCTTG- i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1322135 80 - 2164891 AGGTCCTGGACAGGTTCGCAGGAACCACGGTCAGCTGGCTCCCCTTCT----CACAC----GTGCG------TTTGCAAGAGGGTT--TCTGCTTG- i cebCap1.NW_016107695v1 I 106 C 0 s otoGar3.GL873575 10992835 86 - 12073884 ----CTTGGCCAGTTCTTTATGAAATATGTTAATTGGATGGAGGTCTTGTTCCACATTGTGTTAAG-----ATTTACATGGGAGTC--TTTGAATGC i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56227140 89 + 122678785 TGGTCTGGGCCAGGACCGTGTGCGCCGTGTCCATGTGATGCCTGGCCC----CACGA----ATATGTGAGGGCTCACACAGGAGTCCATCTACACGC i canFam3.chr1 C 0 C 0 e aotNan1.NW_018494782v1 1568443 127 - 1813869 I e dasNov3.JH569188 655247 511 + 760995 I a score=3218106.000000 s hg38.chr6_KB021644v2_alt 170908 334 + 185823 ACT-GCTT-TTTAA--------TTTCAAGCTCATATTTTTCAAAAGTATCTACTATTATTTATCTGGCTCTGTGTCTCTCCACTTTTT-TCAGAGCCTTTGCAGTGTTTATGTCTTAACATGTTTGAACAGTTTTTATCCATGTATTTGACACAGTGGCTG-ATG--------CACCCTTCGTTTGATGCAGCAAACGTCA---------CAGTGTTCCAGACGTTTAAAAAGACGT--AAGGAATTTCAATCAGGGCATTGCTTTAATAGAAATCATACATGTAGT------GATGTT--GAGGGATCAGAAGTTTGGGAAGA-ACGTGATTTCTCTCCGGAAAAGTCATCTCCGGAGTCCTAAGACCTGCAG s panTro5.chr6 173634341 332 + 175400573 ACT-GCTT-TTTAA--------TTTCAAGCTCATATTTTTCAAAAGTATCTACTATTATTTATCTGGCTCTGTGTCTCTCCACTTTTT-TCAGAGCCTTTGCAGTGTTTATGTCTTAACATGTTTGAACAGTTTTTATCCATGTATTTGACACAGTGGCTG-ATG--------CACCCTTCATTTGATGCAGCAAACGTCA-----------GTGTTCCAGACGTTTAAAAAGACGT--AAGGAATTTCAATCAGGGCATTGCTTTAATAGAAATCATACATGTAGT------GATGTT--GAGGGATCAGAAGTTTGGGAAGA-ACGTGATTTCTCTCCGGAAAAGTCATCTCCGGAGTCCTGAGACCTGCAG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171859880 332 + 173848474 ACT-GCTT-TTTAA--------TTTCAAGCTCATATTTTTCAAAAGTATCTACTATTATTTATCTGGCTCTGTGTCTCTCCACTTTTT-TCAGAGCCTTTGCAGTGTTTATGTCTTAACATGTTTGAACAGTTTTTATCCATGTATTTGACACAGTGGCTG-ATG--------CACCCTTCATTTGATGCAGCAAACGTCA-----------GTGTTCCAGACGTTTAAAAAGACGT--AAGGAATTTCAATCAGGGCATTGCTTTAATAGAAATCATACATGTAGT------GATGTT--GAGGGATCAGAAGTTTGGGAAGA-ACGTGATTTCTCTCCGGAAAAGTCATCTCCGGAGTCCTGAGACCTGCAG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11543003 334 - 12463322 ACT-GCTT-TTTAA--------TTTCAAGCTCATATTTTTCAAAAGTATCTACTATTATTTATCTGGCTCTGTGTCTCTCCACTTTTT-TCAGAGCCTTTGCAGTGTTTATGTCTTAACATGTTTGAACAGTTTTTATCCATGTATTTGACACAGTGGCTG-ATG--------CACCCTTCATTTGATGCAGCAAACGTCA---------CAGTGTTCCAGACGTTTAAAAAGACAT--AAGGAATTTCAATCAGGGCATTGCTTTAGTAGAAATCATACATGTAGT------GATGTT--GAGGGACCAGAAGTTTGGGAAGA-ACATGATTTCTCTCCGGAAAAGTCATCTCCGGAGTCCTGAGACCTGCAG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156376025 342 + 157873769 ACT-GCTT-TTTAA--------TTTCAAGCTCATATTTTTCAAAAGTATCTACTATTATTTATCTGGCTCTGTGTCTCTCCACTTTTT-TCAGAGCCTTTGCAGTGTTTACGTCTTAACGTGTTTGACGAGTTTTTGTCTATGTATTTGACACAGTGGCTG-ATG--------CACCCTTCATTTGATGCAGCCAACGTTAACCACATCACAGTGTTCCAGACGTTTAAGAAGACAT--AGGGAATTTCAATCA-GGCATTGCTTTAATAGGAATCATACACGTAGT------GATGCT--GAGGGATCAGAAGTTTGGGAAGA-ACGTGATTTCTCTCCGGAAAAGTCATCTCCGGAGTCCTGAGACCTGCCG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170403399 344 + 172585720 ACT-GCTT-CTTAA--------TTTCAAGCTCATCTTTTAAAAAAATATCTACTATAACTTATCTGGCTCTGTGTCTCTCCACTTTTG-TCAGAGCGTTTGCAGCGTTTACGTCTTAACGTGTTTGAAGAGTTTTTAGCCATGTATTGGACACAGTGGCTG-ATGCAC-----CACCCTTCATTTGATGCAGCCAAAGTTAACCACATCACAGTGTACCAGGCGTTTAAAAAGATGT--AAGAAATTTCAATCAGGACATTGCTTTAATACAAATCATATACGTAGT------GATGTT--GAGGGATCAGAAGTTTGGGAAGA-ATGTGATTTCTCTCCGG--AAGTCATCTCCGCAGTCCTGAGACCTGCAG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169146681 344 - 170955103 ACT-GCTT-CTTAA--------TTTCAAGCTCATCTTTTTAAAAAATATCTACTATAACTTATCTGGCTCTGTGTCTCTCCACTTTTG-TCAGAGCGTTTGCAGCGTTTACGTCTTAACGTGTTTGAAGAGTTTTTATCCATGTATTGGACACAGTGGCTG-ATGCAC-----CACCCTTCATTTGATGCAGCCAAAGTTAACCACATCACAGTGTACCAGGCGTTTAAAAAGATGT--AAGAAATTTCAATCAGGACATTGCTTTAATACAAATCATATACGTAGT------GATGTT--GAGGGATCAGAAGTTTGGGAAGA-ATGTGATTTCTCTCCGG--AAGTCATCTCCGCAGTCCTGAGACCTGCAG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8433058 344 + 10161646 ACT-GCTT-CTTAA--------TTTCAAGCTCATCTTTTTAAAAAATATCTACTATAACTTATCTGGCTCTGTGTCTCTCCACTTTTG-TCAGAGCGTTTGCAGTGTTTACGTCTTAACGTGTTTGAAGAGTTTTTATCCATGTATTGGACACAGTGGCTG-ATGCAC-----CACCCTTCATTTGATGCAGCCAAAGTTAACCACATCACAGTGTACCAGGCGTTTAAAAAGATGT--AAGAAATTTCAATCAGGACATTGCTTTAATACAAATCATATGCGTAGT------GATGTT--GAGGGATCAGAAGTTTGGGAAGA-ATGTGATTTCTCTCCGG--AAGTCATCTCCGCAGTCCTGAGACCTGCAG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1463195 346 + 3144229 ACT-GCTT-TTTAA--------TTTCAAGCTCATCTTTTAAAAAAATATCTACTATTATTTATCTGGCTCTGTGTCTCTCCACTTTTG-TCAGAGCGTTTGCAGCGTTTACGTCTTAACGTGTTTGAAGAGTTTTTATCCATGTATTCGACACAGTGGCTG-ATGCGC-----CACCCTTCATTTGATGCAGCCAAGGTTAACCACGTCACAGTGTACCAGGCGTTTAAAAAGATGT--AAGGAATTTCAATCAGGACATTGCTTTAATACAAATCATATACGTAGT------GATGTT--GAGGGATCAGAAGTTTGGGAAGA-ATATGATTTCTCTCCGGAAAAGTCATCTCCGCAGTCCTGAGACCCGCAG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96748464 346 + 98384682 GCT-GCTT-TTTAA--------TTTCAAGCTCATCTTTTAAAAAAATATCTACTATTATTTATCTGGCTCTGTGTCTCTCCACTTTTG-TCAGAGCGTTTGCAGCGTTTACGTCTTAACGTGTTTGAAGAGTTTTTATCCATGTATTCGACACAGTGGCTG-ATGCAC-----CACCCTTCATTTGATGCAGCCAAGGTTAACCACGTCACAGTGTACCAGGCGTTTAAAAAGATGT--AAGGAATTTCAATCAGGACATTGCTTTAATACAAATCATATACGTAGT------GATGTT--GAGGGATCAGAAGTTTGGGAAGA-ATGTGATTTCTCTCCGGAAAAGTCATCTCCGCAGTCCTGAGACCTGCAG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8311949 346 - 10857215 ACT-GCTT-TTTAA--------TTTCAAGCTCATCTTTTAAAAAAATATCTACTATTATTTATCTGGCTCTGTGTCTCTCCACTTTTG-TCAGAGCGTTTGCAGCGTTTACGTCTTAACGTGTTTGAAGAGTTTTTATCCATGTATTCGACACAGTGGCTG-ATGCAC-----CACCCTTCATTTGATGCAGCCAAGGTTAACCACGTCACAGTGTACCAGGCGTTTAAAAAGATGG--AAGGAATTTCAATCAGGACATTGCTTTAATACAAATCATATACGTAGT------GATGTT--GAGGGATCAGAAGTTTGGGAAGA-ATGTGATTTCTCTCCGGAAAAGTCATCTCCGCAGTCCTGAGGCCTGCAG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15670951 347 - 23502949 ACT-GCTT-TTTAA--------TTTCAAGCTCATCTTTTTCAAAAATATCTACTATTATTTATCTGGCTCTGTGTCTCTCCACTTTTG-TCAGAGCGTTTGCAGCGTTTACATCTTAACGTGTTTGAAGAGTTTTTATCCATGTATTGGACACAGTGGCTGAATGCAC-----CACCCTTCATTTAATGCAGCCAAGGTTAACCACGTCACAGGGTACCAGACGTTTAAAAAGATGT--AAGGAATTTCAATCAGGACATTGCTTTAATACAAATCATATACGTAGT------GATGCT--GAGGGATCAGAAGTTTGGGAAGA-ACGTGATTTCTCTCCAGAAAAGTCATCTCCGCAGGCCTGAGACCCGCAG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169958849 317 + 171630274 ACT-GCTT-TTTAA--------TTTCAAGCTCCTAGTTTTCAAAAGTATCTACTCTTATTTATCTGG-TCTGTGTCTCTCCACTTTTG-TCAGAGTGTTTGTGGTGTTTGCGTCTTCTCATGTGTGAAGAGTTTATATCCGTTTATCCAACACAGTGGCTG-ATG--------CACCCTTCATTTGATTCGGCCAATGTTAACCAT------GTGTTCCAGA---------------------AGTTTCAGTCAGGACATTGCTGTAGTAGAAATCATACACGTGGT------GATTCT--GAGGGATGGGAAGTTTGGGAAGA-ACATGATTCCTCTCTGGAAAAGTCATCTCTGGAATCCTGAGACCTGCAG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1356931 317 - 2905041 ATT-GCTT-TTTAA--------TTTCAAGCTCCTATTTTTCAAAATTATCTACTATTATTTATCTGG-TCTGCGTCTCTCCACTTTTG-TCAGAGTGTTTGCGGTGTTTGCGTCTTACCGTGTTTGAGGGGTTTTCATCCGTGTATCTGACACAGCGGCTG-ATG--------CACCCTTCATTTGATGCGGTCAGTGTTAACCAT------GTGTTCCAGA---------------------AGTTTCAGTCTGGACATTGCTGTAGTAGAAATCATACACGTGGT------GATTTC--GAGGGATGGGAAGTTTGGGAAGA-ACATGATTCCTCTCCGGAAAAGTCATCTCTGGAATCCTGAGACCTGCAG i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1322215 317 - 2164891 ACT-GCTT-TTTAA--------TTTCAAGCTCCTATTTTTCAAAAGTATCTACTATTATTTATCTGG-TCTGTGTCTCTCCACTTTCG-TCAGAGCGTTTGTGGTGTTTGCGTCTTACCGTGTTGGAAGAGTTTTTATCCGTGTATCCGACACAGTAGCTG-ACG--------CGCCCTTCATTTGACGCGGCCAATGTTAACCAT------GTGTTCCAGA---------------------AGTTTCAGTCTGGACATTGCTGTAGTAGAAATCATACACGTGGT------GATTTT--GACGGATGGGAAGTTTGGGAAGA-ACATGATTCCTCTCCGGAAAAGTCATCTCTGGAATCCTGAGACCTGCAG i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1568570 315 - 1813869 ACT-GCTT-TTTAA--------TTTCAAGCTCCTATTTTTCAAAAGTGTCTACTCTTACTTATCTGG-TCTGTGTCTCTCCACTTTTG-TCAGAGCGTTTGCGGTGTTTGCGTCTTGTCATGTTTCAAGAGTTTTTATCCGCG--TCCGACACAGTGGCTG-ACA--------CACACTTCATTTGATGTGGCCAATGTTAACCAC------GTGTTCCAGA---------------------AGTTTCAGTCTGGACACTGCTGTAGTAGAAATCATACACGTGGT------GATTTT--GAGGGATGGGAAGTTTGGGAAGA-ACATGATTCCTCTCCGGAAAAGTCATCTCTGGAATCCTGAGACCTGCAG i aotNan1.NW_018494782v1 I 127 I 746 s otoGar3.GL873575 10992921 355 - 12073884 ACTGGGTT-TTTAAAATTATTGTTTCAAGCTCATATTTTTCAAATA-ATTTACTTTTATTTTTCTGGCTCTGTATTTCTTAATCTTTC-TCAGAGTATTTTTGGTGTTTATATTTTAACATGTTTCCATAGTTGTTATCCATGTATTTGATACAAAGTTCA-GTATACTGTGTGTCCACTCATTTAAT-------AACATAATAACATCACAATCTTCCACAATTTTTTAAAGGTGTAAAAAAAAATTCAATCCAGATATTCCTATAACAGAAATAA---GTGTAGTGTTTAGGGTGTG--GGGGACTCAGAAGTTTGTGAAGA-ACATAATTTCTATCTGGAAATCTCATCACCAAAGTCCCAAGG--TAAAG i otoGar3.GL873575 C 0 I 1 s canFam3.chr1 56227229 332 + 122678785 ACA-GATTCCTTCA--------CTTGAAGCCCAAATCTTTCAAA-TTATCTGCCTTTATTTTTTTAGATCTATATTCTTCCATTTTTTCTCAGAGTATTTTTTATGTTTACA--TTAACATATGTATA---TCTTTATCCATG-GTTTTATTCACTGATTG-AAA--------TATTCTT-ATTTGATGTGACTAACAATG--------CCAGTGTTCCAGACGTCTTAAAAGATGT-GAAAAGATTGCAACCAGGATAGTCCTGTAGCAGAAATAACAGAGATAGT------GATTTTTCTGGGATTCAGAAGTGCAGAAAAAGATGTGTTTTCTACTTGGAAATCTCATCTCCAGAATCCT-AGAACTGCTG i canFam3.chr1 C 0 C 0 e dasNov3.JH569188 655247 511 + 760995 I a score=1483172.000000 s hg38.chr6_KB021644v2_alt 171242 207 + 185823 --TATAGCGTGGAG-ATA-GGGTCCAGGCTCTCAGT----GTCATTTTCGTTTCTCACCCCCTCAGCCCTT-AGA-----------GAGCTGAGCCTGAGCAAGTCGGGAGGGGCTCTTTGGAAGGATTGGGAAACTTCAGT-TTAAATAATCCTGTAATTAAATCATGACTCACT-----------GCATGCCTACTGCATGCCTGGCAGTACAGATGCATTCCACATCCA-GTATCC-G s panTro5.chr6 173634673 207 + 175400573 --TATAGCGTGGAG-ATA-GGGTCCAGGCTCTCAGT----GTCATTTTTGTTTCTCACCCCCTCAGCCCTT-AGA-----------GAGCTGAGCCTGAGCAAGTGGGGAGAGGCTCTTTGGAAGGATTGGGAAACTTCAGT-TTAAATAATCCTGTAATTAAATCATGACTCACT-----------GCATGCCTACTGCATGCCTGGCAGTACAGATGCATTCCCCATCCA-GTACCC-G i panTro5.chr6 C 0 C 0 s panPan2.chr6 171860212 207 + 173848474 --TATAGCGTGGAG-ATA-GGGTCCAGGCTCTCAGT----GTCATTTTTGTTTCTCACCCCCTCAGCCCTT-AGA-----------GAGCTGAGCCTGAGCAAGTGGGGAGAGGCTCTTTGGAAGGATTGGGAAACTTCAGT-TTAAATAATCCTGTAATTAAATCATGACTCACT-----------GCATGCCTACTGCATGCCTGGCAGTACAGATGCATTCCCCATCCA-GTACCC-G i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11543337 207 - 12463322 --TATAGCGTGGAG-ATA-GGGTCCGGGCTCTCAGT----GGCATTTTCGTTTCTCACCCCCTCAGCCCTT-AGA-----------GAGCTGAGCCTGAGCAAGTGGGGAGGGGCTCTTTGGAAGGATTGGGAAACTTCAGT-TTAAATAATCCTGTAATTAAATCATGACTCACT-----------GCATGCCTACTGCATGCCTGGCAGTACAGATGCATTCCCCATCCA-GTACCC-G i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156376367 218 + 157873769 --CACAGTGTGGAG-ATA-GGGTCCAGGCTATCAGT----GTCATTTTCGTTTCTTACCTCCTCAGCCCTT-AGAgagctgagcctgagctgagcctgagcAAGTGGGGAGGGGCTCTTTGGAAGGATTGGGAAACTTCAGT-TTAAATAATCCTGTAATTAAATCGTGACTCACT-----------GCATGCCTGCTGCACGCCTGGCAGTACAGATGCATTCCCCATCCA-GTACCC-G i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170403743 218 + 172585720 --CACGGCGCTGAG-ACA-GGGTCCAGGCTCTCAGC----GTCATTTCCGTTTCTCACCTCCTCAGCCCTTAAGAGAGCTGCGCCTGTGCTATGCCTAAGCAAGTAGGGAGGGGCTCTTTGGAAGGACTGGGAAACTTC-GT-TTAAACAATCCTGTAATTAAATCATAACTTACT-----------GCATGCCTACTGCATGCCTGGCGGTACAGATGCATTCTCCATCCA-GTACCC-G i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169147025 217 - 170955103 --CACAGCGCCGAG-ACA-GGGTCCAGGCTCTCAGC----GTCATTTCCGTTTCTCACCTCCTCAGCCCTT-AGAGAGCTGTGCCTGTGCTATGCCTAAGCAAGTAGGGAGGGGCTCTTTGGAAGGACTGGGAAACTTC-GT-TTAAACAATCCTGTAATTAAATCATAACTTACT-----------GCATGCCTACTGCATGCCTGGCGGTACAGATGCATTCTCCATCCA-GTACCC-G i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8433402 217 + 10161646 --CACAGCGCCGAG-ACA-GGGTCCAGGCTCTCAGC----GTCATTTCCGTTTCTCACCTCCTCAGCCCTT-AGAGAGCTGCGCCTGTGCTATGCCTAAGCAAGTAGGGAGGGGCTCTTTGGAAGGACTGAGAAACTTC-GT-TTAAACAATCCTGTAATTAAATCATAACTTACT-----------GCATGCCTACTGCATGCCTGGTGGTACAGATGCATTCTCCATCCA-GTACCC-G i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1463541 217 + 3144229 --CACAGCGCGGAG-ACA-GGGTCCAGGCTCTCAGC----GTCATTTCCGTTTCTCACCTCCTCAGCCCTT-AGACAGCTGCGCCTGTGCTGTGCCTGAGCAAGAGGGGAGGGGCTCTTTGGAAGGACTGGGAAACTTC-GT-TTAAACAATCCTGTAATTAAATCATAAATTACT-----------GCATGACCAATGCATGCCTGGCAGCACAGATGCATTCTCCATCCA-GTACCC-G i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96748810 206 + 98384682 --CACAGCGCAGAG-ACA-GGGTCCAGGCTCTCAGC----GTCATTTCCGTTTCTCACCTCCTCAGCCCTT-AGAGAGCTGCGCCTGTGCTGTGCCTAAGCAAGTGGGGAGGGGCTCTTTGTAAGGACTGGGAAACTTC-GT-TTAAACAATCCTGTAATTAAATGATAACTCAC----------------------TGCATGCCTGGCGGTACAGATGCATTCTCCATCCA-GTACCC-G i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8312295 217 - 10857215 --CACAGCGCGGAG-ACA-GGGTCCAGGCTCTCAGC----GTCATTTCCGTTTCTCACCTCCTCAGCCCTT-AGAGAGCTGCGCCTGTGCTGTGCCTGAGCAAGAGGGGAGGGGCTCTTTGGAAGGACTGGGAAACTTC-GT-TTAAACAATCCTGTAATTAAATCATAACTTACT-----------GCATGACCAATGCATGCCTGGCGGCACAGATGCATTCTCCATCCA-GTACCC-G i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15671298 228 - 23502949 --CACAGCGCGGAG-ACA-GGGTCCAGGCTCTCAGT----GTCATTTCCGTTCCTCACCTCCTCAGCCCTT-AGAGAGCTGCGCCTGTGCTGTGCCTGAGCAAGTGGGGAGGGGCTCTTTGGAAGGACTGGGAAACTTC-GT-TTAAACAATCCTGTAATTAAATCATAGCTCACTACATGCCTACCGCATGCCTACTGCATGCCTGGCGGTACAGATGCATTCTCCATCCA-GTACCT-G i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169959166 202 + 171630274 --CGCAGGA--GAG-ACA-GGGCCCAGGCTGTGAGT----GACATTTCTGCTTCTCACC-CCCCAGCTCTC-AGTGAGCTGTGCCTGTGCTGAGGCTGAGCATGTGGGGAGGGGCTCT----------TGGGAAACGTCAGT-TTAAGTAATCCTGTGATTCAGTCTCGACTCACT-----------GAATGCCTACCGCGTG-CTGGCA-CACAGACACATTCTCCATCCA-GTGCCT-- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1357248 203 - 2905041 --CACAGCG--GAG-ACA-GGGCCCA-GCTGTGAGT----GACATTTCCGCTTCTCACCTCCCCAGCCCTC-GGTGAGCTGTGCCTGTGCTGTGGCTGAGCACGTGGGGAGGGGCTCT----------TGGGAAACGTCAGT-TTAAGTAATCCTGTGATTCAGTCTCGACTCACT-----------GCATGCCTACTGCGTGCCTGGCA-CACAGACACATTCTCCATCCA-GTGCCT-- i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1322532 205 - 2164891 --CACAGTG--GAG-ACA-GTGCCCAGACTGTGAGT----GACATTTCCGCTTCTCACCCCCACAGCCCTC-AGCGAGCTGTGCCTGTGCTGTGGCTGAGCACGTGGGGAAGGGCTCT----------TGGGAAACGTCAGT-TTAAGTAATCCTGTGATTCAGTCTCAACTCGCT-----------GCATGCCTACCGCGTGCCTGGCA-CACAGACACATTCTCCATCCA-GTGCCCG- i cebCap1.NW_016107695v1 C 0 I 13 s otoGar3.GL873575 10993277 193 - 12073884 --TATACGGGAGAG-AAACCTGCCTCCGTTTTTGGT----GTGAGTTGTGATACTAGAGTTTTCACCCTTT-AGGGAACTGTGGGTGTGCTGGGGTTAAACA-GTGGGG-GGGACTCTGGGGAAGGGCCAGCACCCCTC----------------GCACTTG---------CCGCT-----------GCCTGCCTGCC-CCTGCCTGGCCGCACAGACTCATCCAGCGGCCAGGCAGCT-G i otoGar3.GL873575 I 1 I 8 s canFam3.chr1 56227561 193 + 122678785 TGTAAATTTAGAAGCAAA-ATGTCTAAGTTGTAGGTGGGGGTCACTTACATTTCCCATCTGCTCATCCTTG-GAAGTGGTGAGTCTCAGCTGTGGCCGGGAGAACCCACCCGGGTTCTCTGGAGGGCCAGGGG--CTCCGGCATTAGCCCAGCCGGC---TTACCTGTCAGCTGCT-----------G-----CTGCCCCGTGCCTGTGGGGTCCG------------------------- i canFam3.chr1 C 0 C 0 e aotNan1.NW_018494782v1 1568885 746 - 1813869 I e dasNov3.JH569188 655247 511 + 760995 I a score=153981.000000 s hg38.chr6_KB021644v2_alt 171449 31 + 185823 --AGACACCCTCTCTGTGGGCACCTCACTCATT s panTro5.chr6 173634880 31 + 175400573 --AGACACCCTCTCTGTGGGCACCTCACTCATT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171860419 31 + 173848474 --AGACACCCTCTCTGTGGGCACCTCACTCATT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11543544 31 - 12463322 --AGACACCCTCTCTGTGGGCACCTCACTCATT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156376585 31 + 157873769 --AGACACCCTCTCTGTGGGCACCTCACTCATT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170403961 31 + 172585720 --AGACACCCTCTCTGTGGGCACCTCACTTGTT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169147242 31 - 170955103 --AGACACCCTCTCTGTGGGCACCTCACTTGTT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8433619 31 + 10161646 --AGACACCCTCTCTGTGGGCACCTCACTTGTT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1463758 31 + 3144229 --AGACACCCTCTCTGTGGGCACCTCACTTGTT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96749016 31 + 98384682 --AGACACCCTCTCTGTGGGCACATCACTTGTT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8312512 31 - 10857215 --AGACACCCTCTCCGTGGGCACCTCACTTGTT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15671526 31 - 23502949 --AGACACCCTCTCTGTGGGCACCTCACTTGTT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169959368 14 + 171630274 ------------------GGCATCTTGCCCAG- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1357451 14 - 2905041 ------------------GGCACCTTGCCCAG- i saiBol1.JH378287 C 0 C 0 s otoGar3.GL873575 10993478 26 - 12073884 --AGGCTGCAGGCCTGTGGTCACTCCCT----- i otoGar3.GL873575 I 8 C 0 s canFam3.chr1 56227754 24 + 122678785 GCGCGTCCCCTTCCTGTAGGCCAT--------- i canFam3.chr1 C 0 C 0 e aotNan1.NW_018494782v1 1568885 746 - 1813869 I e cebCap1.NW_016107695v1 1322737 13 - 2164891 I e dasNov3.JH569188 655247 511 + 760995 I a score=502084.000000 s hg38.chr6_KB021644v2_alt 171480 63 + 185823 CCCCAGCAGTGGGGCCGGCCACCTGAGCAGCTGGC-----------CT-------------------CCGGCAGGGC-CAGGACTGAAGAGATG s panTro5.chr6 173634911 63 + 175400573 CCCCAGCAGTGGGGCCGGCCACCTGAGCAGCTGGC-----------CT-------------------CCGGCAGGGC-CAGGACTGAAGAGATG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171860450 63 + 173848474 CCCCAGCAGTGGGGCGGGCCACCTGAGCAGCTGGC-----------CT-------------------CCGGCAGGGC-CAGGACTGAAGAGATG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11543575 63 - 12463322 CCCCAACAGTGGGGCCGGCCACCTGAGCAGCTGGC-----------CT-------------------CCGGCAGGGC-CAGGACTGAAGAGATG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156376616 63 + 157873769 CCCCAGCAGTGGGGCTGGCCACCTGAGCAGCTGGC-----------CT-------------------CTGGCAGGGC-CAGGACTGAAGAGATG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170403992 63 + 172585720 CCCCAGCAGTGGGGCTGGCCACCGGAGCAGCTGGC-----------CC-------------------CCGGCAGGGC-CAGGACTGAAGAGATG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169147273 63 - 170955103 CCCCAGCAGTGGGGCTGGCCACCGGAGCAGCTGGC-----------CC-------------------CCGGCAGGGC-CAGGACTGAAGAGATG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8433650 63 + 10161646 CCCCAGCAGTGGGGCTGGCCACTGGAGCAGCTGGC-----------CC-------------------CTGGCAGGGC-CAGGACTGAAGAGATG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1463789 63 + 3144229 CCCCAGCAGTGGGGCTGGCCACCGGAGCAGCTGGC-----------CC-------------------CCAGCAGGGC-CAGGACTGAAGAGATG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96749047 63 + 98384682 CCCCAGCAGTGGGGCTGGCCACTGGAGCAGCTGGC-----------CC-------------------CAGGCAGGGC-CAGGACTGAAGAGATG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8312543 63 - 10857215 CCCCAGCAGTGGGGCTGGCCACCGGAGCAGCTGGC-----------CC-------------------CCGGCAGGGC-CAGGACTGAAGAGATG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15671557 63 - 23502949 CCCCAGCAGTGGGGCTGGCCACTGGAGCAGCTGGC-----------CC-------------------CCGGCAGGGC-CAGGACTGAAGAGATG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169959382 63 + 171630274 CCCCAGCAGTGGAGCT-GCCACCTGAGCGGCTGGC-----------CT-------------------CCGGCAGGACGCAGGCCTGAAGAGATG i calJac3.chr4 C 0 I 46 s saiBol1.JH378287 1357465 75 - 2905041 CCCCAGCAGAGGGGCTGGCCGCCTGAGTAGCTGGCCCCTGGCAAGACC-------------------CCGGCAGGACTCAGGCCTGAAGAGATG i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1322750 63 - 2164891 CCCCAGCAGTGGGTCTGGCCGCCTAAGCAGCTGG------------CC-------------------CCAGCAGGACGCAGGCCTGAAGAGATG i cebCap1.NW_016107695v1 I 13 C 0 s otoGar3.GL873575 10993504 67 - 12073884 TACTGGTGGTGTGACTG---------------GGT-----------CTGNNNNNNNNNNNNNNNNNNNNGGAAGACT-CAGGGCTTCTAAGTCG i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56227778 26 + 122678785 --------------------------GCAGCTGG------------CT-------------------CAGGACAGAC-CAGTGC---------- i canFam3.chr1 C 0 C 0 e aotNan1.NW_018494782v1 1568885 746 - 1813869 I e dasNov3.JH569188 655247 511 + 760995 I a score=175748.000000 s hg38.chr6_KB021644v2_alt 171543 21 + 185823 TCTGAAGTTAAATGCTGGAAG s panTro5.chr6 173634974 21 + 175400573 TCTGAGGTTAAATGCTGGAAG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171860513 21 + 173848474 TCTGAGGTTAAATGCTGGAAG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11543638 21 - 12463322 TCTGAAGTTAAATGCTGGAAG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156376679 21 + 157873769 TCTGAAATTAAATGCTGGAAA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170404055 21 + 172585720 TCTAAAGTTAAATGCTGGAAG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169147336 21 - 170955103 TCTAAAGTTAAATGCTGGAAG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8433713 21 + 10161646 TCTAAAGTTAAATGCTGGAAG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1463852 21 + 3144229 TCTAAAGTTAAATGCTGGAAG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96749110 21 + 98384682 TCTAAAGTTAAATGCTGGAAG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8312606 21 - 10857215 TCTAAAGTTAAATGCTGGAAG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15671620 21 - 23502949 TCTAAAGTTAAATGCTGGAAG i colAng1.NW_012114488v1 C 0 C 0 s saiBol1.JH378287 1357540 20 - 2905041 CCTAAAGTT-AATGCTGGAGA i saiBol1.JH378287 C 0 I 39 s cebCap1.NW_016107695v1 1322813 20 - 2164891 CCTAAAGTT-AATGCTGGAGA i cebCap1.NW_016107695v1 C 0 I 39 s otoGar3.GL873575 10993571 20 - 12073884 TCTAAAG-TAAACACTGAAGG i otoGar3.GL873575 C 0 I 41 s canFam3.chr1 56227804 17 + 122678785 ----AAGTTAAATGCTGGAGG i canFam3.chr1 C 0 I 38 e aotNan1.NW_018494782v1 1568885 746 - 1813869 I e calJac3.chr4 169959445 46 + 171630274 I e dasNov3.JH569188 655247 511 + 760995 I a score=906624.000000 s hg38.chr6_KB021644v2_alt 171564 97 + 185823 GTCCAATTTGCTCAAATC-ATTGAAAGAACTT-AACACGGATGTCTACCAGATTGCAACAATGTTGGTTACTACAGTACAGTGACTTATTTAAGATAAA s panTro5.chr6 173634995 98 + 175400573 GTCCAATTTGCTCAAATT-ATTGAAAGAACTTTAACACGGATGTCTACCAGATTGCAACAATGTTGGTTACTACAATACAGTGACTTATTTAAGATAAA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171860534 97 + 173848474 GTCCAATTTGCTCAAATT-ATTGAAAGAACTT-AACACGGATGTCTACCAGATTGCAACAATGTTGGTTACTACAATACAGTGACTTATATAAGATAAA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11543659 97 - 12463322 GTCCAATTTGCTCAAATC-ATTGAAAGAACTT-AACACAGATGTCTACCAGATTGCAACAATGTTGGTTACTACCATACAGTGACTTATTTAAGATAAA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156376700 97 + 157873769 GTCCAATTTGCTAAAATC-ATCAAAAGAACTT-AACACGGATGTCTACCAGATTGCAACAGTGTTGGTTACTATAATACAGTGACTTTTTTAAGATAAA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170404076 97 + 172585720 GTCCAATTTGCTAAAATC-ACTGAAAGAACTT-AACACAGATGTCTACCAGATTGCAACAGTGTTGGTTACTACAATACAGTGACTTATTCAAGATAAA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169147357 97 - 170955103 GTCCAATTTGCTAAAATC-ACTGAAAGAACTT-AACACAGATGTCTACCAGATTGCAACAGTGTTGGTTACTACAATACAGTGACTTATTCAAGATAAA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8433734 97 + 10161646 GTCCAATTTGCTAAAATC-ACTGAAAGAACTT-AACACAGATGTCTACCAGATTGCAACAGTGTTGGTTACTACAATACAGTGACTTATTCAAGATAAA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1463873 97 + 3144229 GTCCAATTTGCTAAAATC-ACTGAAAGAACTT-AACACAGATGTCTACCAGATTGCAACAGTGTTGGTTACTACAATACAGTGACTTATTCAAGATAAA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96749131 97 + 98384682 GTCCAATTTGCTAAAATC-ACTGAAAGAACTT-AACACAGATGTCTACCAGATTGCAACAGTGTTGGTTACTACAATACAGTGACTTATTTAAGATAAA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8312627 97 - 10857215 GTCCAATTTGCTAAAATC-ACTAAAAGAACTT-AACACAGATGTCTACCAGATTGCAACAGTGTTGGTTACTACAATACAGTGACTTATTCAAGATAAA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15671641 97 - 23502949 GTCTAATTTGCTAAAATC-ACTGAAAGAACTT-AACACAGATGTCTACCAGATTGCAACAGTGTTGGTTACCACAATACAGTGACTTATTTAAGATAAA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169959491 97 + 171630274 GTCCAGCTTGCTAAAATC-ATTGAAAGAACTTCACCA-CGACGTCCACCAGATTGCAGCAATGTTGGTTACTACGATATAGCCACTGATTTAAGATAAA i calJac3.chr4 I 46 C 0 s saiBol1.JH378287 1357599 98 - 2905041 GTCCAGTTTGCTAAAATC-ATTGAAAGAACTTCACCAGGGATGTCTGCCAGATTGCAACAATGTTGGTTACTACGATACAGCGACTGATTTAAGATAAA i saiBol1.JH378287 I 39 C 0 s cebCap1.NW_016107695v1 1322872 98 - 2164891 GTCCAGTTTGCTAAAATC-ATTGAAAGAACTTCACCACGGACGTCTGCCAGATTGCAACAATGTTGGTTACTATGATGCAGCGACTGATTTACGATAAA i cebCap1.NW_016107695v1 I 39 C 0 s otoGar3.GL873575 10993632 75 - 12073884 TTCTAATTTGCTCCAGTT-GTGTAAGGTACTT-AC----------------------ATCATGTTGCTTATAGCAATCTAGTAACTCGTTTAAGATAAA i otoGar3.GL873575 I 41 C 0 s canFam3.chr1 56227859 97 + 122678785 GTCAGACTTGCTAAAATCTTTTGAAAGGACCT-AG-ACAGATGTCCACCGAATCTCAAAAGTGTCAGTTACTATAGTTCAGTGACTTATGTAAGAAAAA i canFam3.chr1 I 38 I 80 e aotNan1.NW_018494782v1 1568885 746 - 1813869 I e dasNov3.JH569188 655247 511 + 760995 I a score=24901.000000 s hg38.chr6_KB021644v2_alt 171661 3 + 185823 GTG s panTro5.chr6 173635093 3 + 175400573 GTG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171860631 3 + 173848474 GTG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11543756 3 - 12463322 GTG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156376797 3 + 157873769 GTA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170404173 3 + 172585720 GTG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169147454 3 - 170955103 GTG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8433831 3 + 10161646 GTG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1463970 3 + 3144229 GTG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96749228 3 + 98384682 GTG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8312724 3 - 10857215 GTG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15671738 3 - 23502949 GTA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169959588 3 + 171630274 ATG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1357697 3 - 2905041 ATG i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1322970 3 - 2164891 ATG i cebCap1.NW_016107695v1 C 0 C 0 s otoGar3.GL873575 10993707 3 - 12073884 ATG i otoGar3.GL873575 C 0 I 84 e aotNan1.NW_018494782v1 1568885 746 - 1813869 I e dasNov3.JH569188 655247 511 + 760995 I e canFam3.chr1 56227956 80 + 122678785 I a score=2653516.000000 s hg38.chr6_KB021644v2_alt 171664 363 + 185823 GAgctgggcacggtggctcacgcctgtaatctcagcactttgggaggccgaggcaggtggatcacatgaggtcaggagttctagaccagcctgcccaacatggtgaaaccccgtctctactaaaaatacaaaaattacccaggcgtggaggcc----tgcgcctgtagtctcagctattggggaggctgaggcagaagaattgcttcaaaatgggaggca--gaggttgcagtgagccgacgtcgcgccactgtgctccagcctgggcaacagagcaagactc--tctcaaaaac--------agaaacaaaaaagataaaa---TGGTACCTCAACATCT------------TGATAATAAGGCCGAACACTTCTTTACAAG----TTTATTTATTC s panTro5.chr6 173635096 364 + 175400573 GAActgggcatggtggctcacgcctgtaatctcagcactttgggaggccgaggcaggtggatcacatgaggtcaggagttctagaccagcctgcccaacatggtgaaaccccgtctctactaaaaatacaaaaattacccaggcgtggaggcg----tgcgcctgtagtctcagctattggggaggctgaggcagaagaattgcttcaaaatgggaggca--gaggttgcagtgagccaagattgcgccactgtgctccagcctgggcaacagagcaagactc--tc--aaaaacg-----aaaaaaaaaaaaaagataaaa---TGGTACCTCAACATCT------------TGATAATAAGGCCGAACACTTCTTTACAAG----TTTATTTATTC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171860634 366 + 173848474 GAActgggcatggtggctcacgcctgtaatctcagcactttgggaggccgaggcaggtggatcacatgaggtcaggagttctagaccagcctgcccaacatggtgaaaccccgtctctactaaaaatacaaaaattacccaggcgtggaggcg----tgcgcctgtagtctcagctattggggaggctgaggcagaagaattgcttcaaaatgggaggca--gaggttgcagtgagccaagattgcgccactgtgctccagcctgggcaacagagcaagactc--tctcaaaaaac-----gaaaaaaaaaaaaagataaaa---TGGTACCTCAACATCT------------TGATAATAAGGCCGAACACTTCTTTACAAG----TTTATTTATTC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11543759 370 - 12463322 GAActgggcacggtggctcacgcctgtaatctcagcactttgggaggccgaggcaggtggatcacatgaggtcaggagttctagaccagcctgcccaacatggtgaaaccccgtctctactaaaaatacaaaaattacccaggcgtggaggca----tgcgcctgtagtctcagctattggggaggctgaggcagaagaattgcttcaaaatgggaggcagtgaggttgcagtgagccaagattgcgccactgtgctccagcctgggcaacagagcaagactc--tctcaaaaatga---aaaaaaaaaaaaaaagataaaa---TGGTACCTCAACATCT------------TGATAATAAGGCCGAACACTTCTTTACAAG----TTTATTTATTC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156376800 364 + 157873769 GAActgggcacggtggctcacgcctgtaatctcagcactttgggaggccgaggcaggtggatcacatgaggtcaggagttctagaccagcctgcccaacatggtgaaaccccgtctctactaaaaatacaaaaattaccaaggcgtggaggtg----tgcgcctgtagtctgagctattggggaggctgaggcagaataattgcttctaaatgggaggca--gaggttgcagtgagccaagattgcaccactgtgctccagcctgagcatcagagcaagacta--tgtcaaaaac----------aaaacaaaaacataaaaTGGTGGTACCTCAACATCT------------TGATAATAAGGCTGAACACTTCTTTACAAG----TTTAtttattc i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170404176 384 + 172585720 GAActgggcatggtggctcacgcctgtaatcccagcactttgggagatcaaggcagatggatcacatgaggtcaggagttctagaccagcctgcccaacatggtgaaaccctgtctctactaaaaatacaaaaattacccaagcatggaggca----tgcacctgtagtctcagctactggggaggctgaggcagaagaattgcttcaaaatgggaggtg--gaggtcgcagtgagccaagattgcaccaatatgctccagcctgggcaacagagccagattctgtctcaaaaatga-aaaaaaaaaaaaaaaaagataaaa---TCGTACCTCAACATCTTTGAGACTTTAGTGATAATGAGACTGAACATTTCTTTACAAG----tttatttattt i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169147457 384 - 170955103 GAActgggcatggtggctcacgcctgtaatcccagcactttgggagatcaaggcagatggatcacatgaggtcaggagttctagaccagcctgcccaacatggtgaaaccctgtctctactaaaaatacaaaaattacccaagcatggaggca----tgcacctgtagtctcagctactggggaggctgaggcagaagaattgcttcaaaatggtaggtg--gaggtcgcagtgagccaagattgcatcaatatgctccagcctgggcaacagagccagattctgtctcaaaaatga-aaaaaaaaaaaaaaaaagataaaa---TCGTACCTCAACATCTTTGAGACTTTAGTGATAATGAGACTGAACATTTCTTTACAAG----tttatttattt i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8433834 371 + 10161646 GAActgggcatggtggctcacgcctgtaatcccagcactttgggagatcaaggcagatggatcacatgaggtcaggagttctagaccagcctgcccaacatggtgaaaccctgtctctactaaaaatacaaaaattacccaagcatggaggca----tgcacctgtagtctcagctactggggaggctgaggcagaagaattgcttcaaaatgggaggtg--gaggtcgcagtgagccaagattgcaccaatatgctccagcctgggcaacagagccagattctgtctcaaaaatg---aaaaaaaaaaaaaaaagataaaa---TCGTACCTCAACATCTTTGAGACTTTAGTGATAATGAGACTGAACATTTCTTTACAAG--------------- i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1463973 388 + 3144229 GAActgggcatggtggctcacgcctgtaatctcagcactttgggagaccgaggcaggtggatcacatgaagtcaggagttctagaccagcctgctcagcatggtgaaaccctgtctctactaaaaatacaaaaattacccaggcatggaggta----tgcacctgtagtctcagctactggggaggctgaggcagaagaattgcttcaaaatgggaggca--gaggtcgcagtgagccaagattgcaccaatatgctccagcctaggcaacagagccagattctgtctcaaaaacga-aaaaaaaaaaaaaaaaaGATAAAA---TCATACCTCAACATCCTTGAGACTTCAGTGATAATGAGACTGAACATTTCTTTACAAGTTTGtttatttattt i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96749231 380 + 98384682 GAActgggcatggtggctcacgcctgtaatcccagcactttgggagaccgaggcaggtggatcacacgaggtcaggagttctagaccagcctgcccaacatggtgaaaccctgtctctactaaaaatacaaaaattacccaggcatggaagca----agcacccgtagtctcagctactggggaggctgaggcagaagaattgcttcaaaatgggaggtg--gaggtcgcagcgagccaagattgcaccagtgtgctccagcctggacaacagagccagattctgtctcaaaaacga--aaaaaaaaaaaaaaaagataaaA---TCATACCTCAACATCTTTGAGACTTTAGTGATGATGAGACTGAACATTTCTTTATAAGT-------tttattt i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8312727 389 - 10857215 GAActgggcatggtggctcacgcctgtaatctcagcactttgggagaccaaggcaggtggatcacatgaggtcaggagttctagaccaccctgcccaacatggtgaaaccctgtctctactaaaaatacaaaaattacccaggcatggaggta----tgcacctgtagtctcagctactggggaggctgaggcagaagaattgcttcaaaatgggaggtg--gaggtcgcagtgagccaagattgcaccaatatgctccagcctgggcaacagagccagattctgtctcaaaaacgaggaaaaaaaaaaaaaaaaGATAAAA---TCGTACCTCAACATCTTTGAGACTTTAGTGATAATGAGACTGAACATTTCTTTACAAGTTTGTTTGtttattt i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15671741 379 - 23502949 GAActgggcatggtggttcacatctgtaatcccagcactttgggagaccgaggcaggtggatcacatgaggtcaggagttctagaccagcccgcccaacatggtgaaaccctgtctctactaaaaatacaaaaattacccaggcatggaggca----ggcccctgtagtctcagctactggggaggctgaggcagaagaattgcttcaaaatgggaggcg--gaggtcgcaggcagcccggattgcaccaatatgctccagcctgggcaacagagccagattctgtctcaaaaatga------acaaaaaaaaaaGATCAAA---TCATACCTCAATATCTTTGAGACTTTAGTGATAATGAGACTGAACACTTCCTTACAAG----tttatttattt i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169959591 313 + 171630274 GAAcctggcgtggtggctcacgcctgtaatcccagcgctttttgaggctgaggcaggtggatcacctgaggtcaggagttctagaccagcttgcccaacacagtgaaatcccgtctctactaaaaatacaaaaactagctgggcgtggtggtg----tgcacctgtagtcgcggttactcaggaggctgaggcaggagaatttcttgaacctgggatgtg--gaggttgcagtgagccgagatcacaccactgcactccagcctg-------------------------------------------------ggATAAAA---TGGTACCTCGACATCTTTAAGACTTTAATGATAATAAGGCAGAACA--------------------------- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1357700 325 - 2905041 GAAcctggcgtggtggctcacacctgtaatctcagtgctttttgaggctcaggcaagtggatcgcctgaggtcaggagttctagatcagcttgcccaacccggtgaaatcccgtctctaccaaaaacacaaaaattagctgggcgtggtggtgcacacacacctgtagtctcggctactcaggaggctgaggcagcagaattgcttgaacctgggaggtg--aaggttgcagtgagccaagatcacaccattgcactccagcctg---------------CTTATTCT--------------------------GGAAAAAA---TGGTACCTCAACATCTTTGAGACTTTAATGATAATAAGGCTGAACA--------------------------- i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1322973 313 - 2164891 GAAcctggcgtggtggcttacgcctgtaatcccagcgcttttcaaggctgaggcaagtggatcgcctgaggtcaggagttctagaccagcttgcccaacatggtgaaatcccgtctctactaaaaatacaaaaattagctgggcgtggtggtg----tgcacctgtagtctctgctgctcaggaggctgaagcagcagaattgcttgaacctgggaggtg--gaggttgcaatgagccaagaccacaccactgcactccagcctg-------------------------------------------------ggATAAAA---TGGTACCTCAACATCTTTGAGACTTTAATGATAATAAGGCTGAACA--------------------------- i cebCap1.NW_016107695v1 C 0 C 0 e otoGar3.GL873575 10993710 84 - 12073884 I e aotNan1.NW_018494782v1 1568885 746 - 1813869 I e dasNov3.JH569188 655247 511 + 760995 I e canFam3.chr1 56227956 80 + 122678785 I a score=1449321.000000 s hg38.chr6_KB021644v2_alt 172027 191 + 185823 ttttttttttttttttttt--ttttttttttACTTTAAGATga-cagagcctggcttt---gtcgcccgggctagaatgcagtggcgcaatcacagctcactgtagcctcaacctcctggactcaagctatccacctgactccgcctcccaa----agtgctgggattacaggcgtgacccactgcgcccggcCCACTTAC s panTro5.chr6 173635460 180 + 175400573 Tttttttttttttttttt-------------actttaagatga-cagagcctggcttt---gtcgcccaggctagaatgcagtggcgcgatcacagctcactgtagcctcaacctcctggactcaagctatccacccgcctcagcctcccaa----agtgctgggattacaggcgtgacccactgcgcccggcCCACTTAC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171861000 177 + 173848474 ttttttttttttttt----------------actttaagatga-cagagcctggcttt---gtcgcccaggctagaatgcagtggcgcgatcacagctcactgtagcctcaacctcctggactcaagctatccacccgcctcagcctcccaa----agtgctgggattacaggcgtgacccactgcgcccggcCCACTTAC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11544129 176 - 12463322 tttttttttttttt-----------------actttaagatga-cagagcctggcttt---gttgcccaggctacaatgcagtggcgcgatcacagctcactgtagcctcaacctcctggactccagctatccacccacctcagcctcccaa----agtgctgggattacaggcatgacccactgcgcccagcCCACTTAC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156377164 167 + 157873769 ttttt--------------------------actttaagatga-cagagtctggtttt---gtcgcccaggctagaatgcagtggtgcaatcacagctcactgtagcctcaacctcctggactcaagctctccacccgcctcagcctcccag----agtgctgggattacaggcgtgagccactgctcccggcCCACTTAC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170404560 188 + 172585720 atttatttatttatttatttatttatttattgctttaagatgc-cagagtctggtggt---gtcgcccaggctagaatgcagtggtgcgatcacagctcactgtagcctcaacctc-----ctcaagctatccacccacctcagcctcccaa----agtgctgggattacaggcatgagtcactgcgcccggcctacttac i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169147841 188 - 170955103 atttatttatttatttatttatttatttattGCtttaagatgt-cagagtctggtgtt---gtcgcccaggctagaatgcagtggtgcgatcacagctcactgtagcctcaacctc-----ctcaagctatccacccacctcagcctcccaa----agtgctgggattacaggcatgagtcactgcgcccggcctacttac i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8434205 183 + 10161646 -----tttatttatttatttatttatttattgctttaagatgt-cagagtctggtgtt---gtcgcccaggctagaatgcagtggtgcgatcacagctcactgtagcctcaacctc-----ctcaagctatccacccacctcagcctcccaa----agtgctgggattacaggcatgagtcactgcgcccggcctacttac i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1464361 179 + 3144229 atttatttatttatttatttatttatttattgctttaagatgt-cagagtctggcgtt---gtcgcccaggctagaatgcagtggc---------gctcactgtagcctcaatctc-----ctcaagctatccacccacctcagcctcccaa----agtgctgggattacaggcatgagccactgcgcccggcctacttac i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96749611 188 + 98384682 atttatttacttattttttcatttatttattGCtttgagatgt-gagagtctggcgtt---gtcacccaggctagaatgcagtggcgcgatcacagctcactgtagtctcaacctc-----ctcgagctgttcacccacctcagcctcgcaa----agtgctgggattacaggcgtgagccactgcgcccggcCTACTTAC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8313116 191 - 10857215 atttatttatttatttatttatttatttattGCtttaagatgt-cagagtctggcgttgtcgtcgcccaggctagaatgcagtggcgcgatcacagctcactgtagcctcaatctc-----ctcaagctatccacccacctcagcctcccaa----agtgctgggattacaggcgtgagccactgcgcccggcCTACTTAC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15672120 188 - 23502949 atttatttatttatttatttatttaCCTATTGCtttaagatgt-cagagtctggcatc---gtcgcctaggctagaatgcagtggcacgatcacaggtcactgtagcctcaacctc-----ctcaagctatccacccacctcagcctcccaa----agtgctgggattacaggcgtgagccactgtgcccggcCTACTTAC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169959904 165 + 171630274 ---------------------ttttttt-----tttaagttga-cagagtctgtcttt---gttgcccaggt--gaatgcagaggcacgatcacagctcgctgtagccccaacctgctgggctcaaaccagccatccgcctcagcttcccaa----agtgctgggatgacaggagtgagccactgcgcccagcCTGCTTAT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1358025 172 - 2905041 ---------------------tttttttttaactttaagatga-cagagtctgtcttt---gtcgcccaggctagaatgcagtgacgtgatcacagctcactgtagcctcaacgtgctgggctcaagctatccatccacctcagcttcccaa----agtactgggattacaggagtgagccactgcacccagcCTGCTTAT i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1323286 172 - 2164891 ---------------------tttttttttaactttaagatga-cagagtctgtcttt---gtcgcccaggctagaatgcagtggcacgatcacagctcactgtagtctcaacctgctgggctcaagctatccatccacctcagcttcccaa----agtactaggattacaggagtgagccactgcacccagcCTGCTTAT i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1569631 196 - 1813869 --tttttttttttttttttttttttttttttacttaagtatgatcggagtctgtcttt---gtcccccaggctagaatgcagtggcatgatcacagctcactgtagcctcaacctgctgggctcaagctatccacccgtcctctctcccagatgctagtatgggtattacaggagtgagccactgcacccagcCTACTTAT i aotNan1.NW_018494782v1 I 746 C 0 e otoGar3.GL873575 10993710 84 - 12073884 I e dasNov3.JH569188 655247 511 + 760995 I e canFam3.chr1 56227956 80 + 122678785 I a score=94843.000000 s hg38.chr6_KB021644v2_alt 172218 14 + 185823 -TCTGAAAATATTTT s panTro5.chr6 173635640 14 + 175400573 -TCTGAAAATATTTT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171861177 14 + 173848474 -TCTGAAAATATTTT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11544305 14 - 12463322 -TCTGAAAATATTTT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156377331 13 + 157873769 -TCTGAAAATA-TTT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170404748 13 + 172585720 -tctgaaaata-ttt i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169148029 13 - 170955103 -tctgaaaata-ttt i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8434388 13 + 10161646 -tctgaaaata-ttt i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1464540 13 + 3144229 -tctgaaaata-ttt i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96749799 14 + 98384682 -TCTGAAAATATTTT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8313307 14 - 10857215 -TCTGAAAATATTTT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15672308 13 - 23502949 -TCTGAAAATA-TTT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169960069 13 + 171630274 -TCTAAAAATAC-TT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1358197 14 - 2905041 -TCTGGAAATACTTT i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1323458 14 - 2164891 -TCTGGAAGTACTGT i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1569827 14 - 1813869 -TCTGGAAATACTTT i aotNan1.NW_018494782v1 C 0 C 0 s dasNov3.JH569188 655758 14 + 760995 TTTTAAAAAAAGAT- i dasNov3.JH569188 I 511 C 0 e otoGar3.GL873575 10993710 84 - 12073884 I e canFam3.chr1 56227956 80 + 122678785 I a score=13923.000000 s hg38.chr6_KB021644v2_alt 172232 1 + 185823 T s panTro5.chr6 173635654 1 + 175400573 T i panTro5.chr6 C 0 C 0 s panPan2.chr6 171861191 1 + 173848474 T i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11544319 1 - 12463322 T i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156377344 1 + 157873769 T i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170404761 1 + 172585720 t i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169148042 1 - 170955103 t i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8434401 1 + 10161646 t i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1464553 1 + 3144229 t i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96749813 1 + 98384682 T i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8313321 1 - 10857215 T i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15672321 1 - 23502949 T i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169960082 1 + 171630274 T i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1358211 1 - 2905041 T i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1323472 1 - 2164891 T i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1569841 1 - 1813869 T i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10993794 1 - 12073884 T i otoGar3.GL873575 I 84 C 0 s dasNov3.JH569188 655772 1 + 760995 T i dasNov3.JH569188 C 0 C 0 e canFam3.chr1 56227956 80 + 122678785 I a score=372736.000000 s hg38.chr6_KB021644v2_alt 172233 36 + 185823 TTGCTTACATTAATTTCCTCTTTAAAAACTCAGGTT s panTro5.chr6 173635655 36 + 175400573 TTGCTTACATTAATTTCCTCTTTAAAAACTCAGGTT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171861192 36 + 173848474 TTGCTTACATTAATTTCCTCTTTAAAAACTCAGGTT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11544320 36 - 12463322 TTGCTTACATTAATTTCCTCTTTAAAAACTTAGGTT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156377345 36 + 157873769 TTGCTTACATTCATTTCCTCTTTAAAAACTCAGGTT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170404762 36 + 172585720 ttgCTTACATTCATTTCCTCTTTAAAAACTCAAGTT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169148043 36 - 170955103 ttgCTTACATTCATTTCCTCTTTAAAAACTCAAGTT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8434402 36 + 10161646 ttgCTTACATTCATTTCCTCTTTAAAAACTCAAGTT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1464554 36 + 3144229 ttgCTTACATTCGTTTCCTCTTTAAAAACTGAAGTT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96749814 36 + 98384682 TTGCTTATATTCATTTCCTCTTTAAAAACTCAAGTT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8313322 36 - 10857215 TTGCTTACATTTGTTTCCTCTTTAAAAACTCCAGTT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15672322 36 - 23502949 TTGCTTACATTCATTTCCTCTTTAAAAACTCAAGTT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169960083 34 + 171630274 TTGTTTACATTAATTTCCTC--TAAAAAGTCTGGTT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1358212 34 - 2905041 TTGTTTACATTAATTTCCTC--TAAAAAGTCAGGTT i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1323473 34 - 2164891 TTGTTTACATTAATTTCCTC--TGAAAAGTCGGGTT i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1569842 34 - 1813869 TTGTTTACATTAATTTCCTC--TAAAGAGTCGAGTT i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10993795 36 - 12073884 TTGGTTACAGTCTTTTCTCATTTAAAATCTCAGGTT i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56228036 36 + 122678785 TTACTTATATTAGTTTCCCCTTTAAAACCTAAGACT i canFam3.chr1 I 80 I 1441 s dasNov3.JH569188 655773 35 + 760995 TTGTTTATATTCTTCATCCATTTGAAA-TTAACATT i dasNov3.JH569188 C 0 C 0 a score=2361166.000000 s hg38.chr6_KB021644v2_alt 172269 232 + 185823 AGCAAGGAAATTAAGGATtctgcatttttacaagtgctcc-aggtaattctga------tTCTCAG---TTCCGAATTAAGATCTTCTGGATTGCAGTAAAAGGAAACATCTGTTCAGAACATA------------------------AGAAATGCTTctctaaggtagactttgttacttcctttttgcacacaggaaaattgaagctcagtaataaactaagttgtctgatg---cacagttagtcagtggcagggctgtgct-ttac s panTro5.chr6 173635691 232 + 175400573 TGCAAGGAAATTAAGGATtctgcatttttacaagtgctcc-aggtaattctga------tTCTCAG---TTCCGAATTAAGATCTTCTGGATTGCAGTAAAAGGAAACATCTGTTCAGAACATA------------------------AGAAATGCTTCTCTAaggtagactttgttacttcctttttgcacacaggaaaattgaagctcagtaataaactaagttgtctgatg---cacagttagtcggtggcagggctgtgct-ttac i panTro5.chr6 C 0 C 0 s panPan2.chr6 171861228 232 + 173848474 TGCAAGGAAATTAAGGATtctgcatttttacaagtgctcc-aggtaattctga------tTCTCAG---TTCCGAATTAAGATCTTCTGGATTGCAGTAAAAGGAAACATCTGTTCAGAACATA------------------------AGAAATGCTTCTCTAaggtagactttgttacttcctttttgcacacaggaaaattgaagctcagtaataaactaagttgtctgatg---cacagttagtcggtggcagggctgtgct-ttac i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11544356 232 - 12463322 TGCAAGGAAATTAAGGATtctgcatttttacaagtgctcc-aggtaattctga------tTCTCAG---TTCCGAATTAAGATCTTCTGGATTGCAGTAAAAGGAAACATCTGTTCAGAACATA------------------------AGAAATGCTTCTCTAaggtagactttgttacttcctttttgcacacaggaaaattgaagctcagtattaaactaagttgtctgatg---cacagttagtcagtggcagggctatgct-ttac i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156377381 232 + 157873769 TGTAAGGAAATTAAAGATtctgcatttttacaagtgctcc-aggtaattctga------tTCTCAG---TTCCGAATTAAGATCTTCTGGATTATAGTAAAATGAAACATCTGTTCAGAACATA------------------------AGAAATGCTTctctaaggtagactttgttatttcctttttgcacataggaaaattgaagctcagtattcaactaagttgtctgatg---cgcagttagtcagtggcagggctgtgct-ttac i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170404798 237 + 172585720 TGTAAGGAAGTTAAGGATtctgcatttttacaagtgctcc-aggtaattctgatgcCA-TTCTGAG---TTCCGAATTAAGATTTTCTGGATTGTAGTAAAATGAGACATCTGTTCAGAACATA------------------------AGAAATGCTTCTCTAAATtagacgttgttatttcctttttgcacataggaaaactgaagctcagtattaaaccaagttgtcagatg---cgcagttaatcagtggcagggctatgct-ttat i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169148079 237 - 170955103 TGTAAGGAAGTTAAGGATtctgcatttttacaagtgctcc-aggtaattctgatgcCA-TTCTGAG---TTCCGAATTAAGATTTTCTGGATTATAGTAAAATGAGACATCTGTTCAGAACATA------------------------AGAAATGCTTCTCTAAATtagacgttgttatttcctttttgcacataggaaaactgaagctcagtattaaaccaagttgtcagatg---cgcagttaatcagtggcagggctatgct-ttat i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8434438 237 + 10161646 TGTAAAGAAGTTAAGGATtctgcatttttacaagtgctcc-aggtaattctgatgcCA-TTCTGAG---TTCCGAATTAAGATTTTCTGGATTATAGTAAAATGAGACATCTGTTCAGAACATA------------------------AGAAATGCTTCTCTAAATtagacgttgttatttcctttttgcacataggaaaactgaagctcagtattaaaccaagttgtcagatg---cgcagttaatcagtggcagggctatgct-ttat i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1464590 237 + 3144229 TGTAAGGAAGTTAAGGATtctgcatttttacaagtgctgc-aggtaattctgatgcCG-TTCTGAG---TTCCGAATTAAGATTTTCTGGATTATAGTAAAATGAAACATCTGTTCAGAACATA------------------------AGAAATGCTTctctgaattagacgttgttatttcctttttgcacataggaaaactgaagctcagtattaaaccaagttgtcagatg---cgcagtttatcagtggcagggctatgct-ttat i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96749850 237 + 98384682 TATAAGGAAGTTAAGGATtctgcatttttacaagtgctcc-aggtaattctgatgcCA-TTCTGAG---TTCCGAATTAAGATTTTCTGGATTATAGTAAAATGAAACATCTGTTCAGAACATA------------------------AGAAATGCTTCTCTAagttagacgttgttatttcctttttgcacataggaaaactgaagctcagtattaaaccaagttgtcagatg---cgcagttaatcagtggcagggctatgct-ttat i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8313358 237 - 10857215 TGTAAGGAAGTTAaggattctgcatttttacaagtgctcc-aggtaattctgatgccg-ttCGGAG---TTCCGAATTAAGATTTTCTGGATTATAGTAAAATGAGACATCTATTCAGAACATA------------------------AGAAATGCTTctctgaattagacgttgttatttcctttttgcacataggaaaactgaagctcagtattaaaccaagttgtcagatg---cgcagtttatcagtggcagggctatgct-ttat i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15672358 237 - 23502949 TGTAAGGAAGTTAAGGATtctgcattttcacaagtgctcc-aggtaattctgacgcCA-TTCTGAG---TTCCGAATTAAGATTTTCTGGACTATAGTAAAATGAAATATCTGTTCAGAACATA------------------------AGAAATGCTTctctgaattagacgttgttatttccttattgcacataggaaaactgaagctcagtattaaaccaagttgtcagatg---tgcagttaatcagtgacagggctatgct-ttat i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169960117 236 + 171630274 TGTAAGGAAATTAAAGATtcttcatttttacaagtgctcc-aggtaattctgatgcCA-TTCTTAG---TTCTGAATTAATATTTTCTGGATGATAGTAAAATGAAACATCTGTACCAAATCTA------------------------AGAAATGCCTCTCTAGCTtagggtttgtgatttcctttttgcacacaggagaattgaaaccgagta-taaaccaagttgtccgacg---ctcaggtattcagtgtcggggctacgct-ttac i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1358246 237 - 2905041 TGTAAGGAAATTAAAGATTCTTCATTTTTATGAGTGCTCCAAGGTAATTCTGATGCCA-TTCTTAG---TTCTGAATTAATATTTTCTGGATGATAGTAAAATGAAACATCTGTACAAAATCTA------------------------AGAAATGCCTCTCTAGCTtagggtttgtgatttcctttttgcacataggaaaattgaagccgagtg-taaactaagttgtccgatg---ctcaggtaatcagtgccagggctatgct-tcat i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1323507 236 - 2164891 TGTAAGGAAATTAAAGATtcttcatttttacaagtgctcc-aggtaattctgatgcCA-TTCTTAG---TTCTGAATTAATATTTTCTGAATGATAGTAAAATGAAACATCTGTACCAAATCTA------------------------AGAAATGCCTCTCTAGCTtagggtttgtgatttcctttttgcacataggaaaattgaagccgagta-taaaccaagttgtctgatg---ctcaggtaatcagtgtcagggctatgct-ttat i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1569876 229 - 1813869 TGTAAGGAAATTAAAAATtcttcatttttacaagtgctcc-aggtagttctgatgcCA-TTCTTAG---TTCTGAATTGATATTTTCTGGATGATAGTAAAATGAAACATCTGTACCAAATCTA------------------------AGACATGCCTCTCTAGCTtagggtttgtgatttcctttttgcacacaggaaaattgaagccgagta-taaactaagttgtccgatg---ctcaggtaatcagtgtca-------gct-ttat i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10993831 256 - 12073884 TGGAACAAAATTGAGGACTTGGTATTTTCACAACCACCCC-AGGCAGTCCTGATGCCA--TCTGAGACACTCTGAGCAAAGAT-GTCTGGATTATAGTAAAATGGAACACCTGTGTAGAATAAGTGTTCTAATCTATTCTGTTCTAATAGAAGGTCCTCCCAAAGTTGAGCTTTGCTGTTTCCTTTTTAT-CGTGGGAAAACTGGAGTCAAGCGTTTAGCCAAGCTGCCCAGTG---CTGTGGTA------GACAGGTCGGTGCTCCTGC i otoGar3.GL873575 C 0 C 0 s dasNov3.JH569188 655808 236 + 760995 TGTATCAggatacaggaatctgcattttcccaagcacccc-gggttattttgatgcCAGGGGTAAA---TTCTGAATTTAGATATTCTGGATTCAGATTCAATGCAATATACGTTCATAACTTA------------------------AGAAATGC----CTAagataagctgtgttatttccctttt-cacacaagaaaattgaagttgagtatcaaactaagctgcccaatatcttatagttagtcagtagtaaagtttttct-tcat i dasNov3.JH569188 C 0 C 0 e canFam3.chr1 56228072 1441 + 122678785 I a score=13547445.000000 s hg38.chr6_KB021644v2_alt 172501 1492 + 185823 -accaggt-ctgtctgactcaggagctgatattattcccaACATACACTAAATATTTTCTAAAAGAAAGCC-CGTAACTTAAGATCCTTTGCATCCACTAAACAGAATATAAAGCCAAGCTT-TATA---TTTTAAAAAG------TCTGGATTTT-AAAATAGATTATTTTATAAGCCAACTGGTTAAAAAGTTCTGATGTAACTGCATGAAAATTCTAACATATCTTGTCATCTTATGATTCGATAATATCTGGTTTGTTGGAGGAAAAGAGAAAATCCATAATTG--------GCTGTTGAG----------AAACTCGAGATGGGACTTGTACTCATGAAAGCTGAGGATCAGGAGGGCTTATGCCCACAGCCGCTG---GGCCCCAGGATGCTGGACACGTTCA-----------CCCATGACGCGGGATG------GGTTCACTTCTTTGTTAATAAATCCATCACACGAA-------AACAGCT--GTCTCAC---CTCCGCTGTAAGAGAGGGTCAGCAAAGGCGCAGCTGTGGGAGAGTGTCACAAACTAGTGTTCAGATGCCAGGGGCCCAAGACA-------------C-AGAGCCACATTTCACTCGGGTGTGATTTGCCCAGCGAAGAGTTAAACGTATGTTCCCTACTGAGAAACAGGAG---GCTATTTCTCACTTG--GTAAATGTCAACATGACCTGAGTGGA--CAGCATTATTCTCTCTCTCCTGTCCAGAGCTTGCAGAGAGTTT-GACCG--TCCTCCAGAAGAGTTAAGTGACCTGGCATTAAAATGACCTTTTAT-AGG-TTCAAGGCAAAATCAATCAATCCTGAGAAGCCATTCTAACCTCTCATCCTGCTGGTAGTTTTCCTTTCATTCTGAATTCCCATGTAACTGACAGAGTTACAGCAAAGGAGGTGGAGACCC-AGCCATCAGTGGG-AGCCGTTCACT--------------------GCTGAGTGCCAGGGTCTTTGGCCAGCAGCTCTTCCTTGCCTGGTGCCCAGCTGCAGCTGGCAACATCTGTGACTGACCCTAGGGATCCTTGCC---------------------TGGTG-CCTGG--TA--CAGCTGGCAGCCTCTGCGAGTGACCC----------TGAGGATGAAGCACCCAGCGGTGGT-------GAAGGAAGGTCTGTT-AATGAGCAGAATGTGGAGAGACCAGCAGGAAGAGAAGCAGAGG--T---GGCAACAAC-----GCTTTCCACAC--------TTTCTTGCCTCGTGGTCTCATTTTTCTCTCTGCCCTTTATCCCAGGAGAGTGTTCTCCACTATTTACAAATAAACTCGGGGCTCCTGTCCTTGTTTAGCTTTAACCAAAAGTCTTGGTGGATTCA-----GACTTTCACCCA---TTTCATTCAGGAGAAGCCCAAGA--TTTCATTAAAACTGGGGTTTTAC--------AAACTTCCAGTGACAAAGCCTAAATCGTCATCAGTGCTGATGG-GTTGGATCCT----------CTCATGGGGCGTCTGATC----CATGTTTACCAGGTGCCTGCTATGTCCTCTCCACC-------AGGCGTGCAGCTCTGCAAAGAAGAAAAACCCGGCTCGTGCTGTCAGGGAGTGT-GGGAAAGCCATGGA----AAAGTTCTCCTGAAAAGTAAACGC s panTro5.chr6 173635923 1491 + 175400573 -accaggt-ctgtctgactcaggagctgatattattcccaACATACACTAAATATTTTCTAAAAGAAAGCC-CGTAACT-AAGATCCTTTGCATCCACTAAACAGAATATAAAGCCAAGCTT-TATA---TTTTAAAAAG------TCTGGATTTT-AAAATAGATTATTTTGTAAGCCAACTGGTTAAAAAGTTCTGATGTAACTGCATGAAAATTCTAACATATCTTGTCATCTTATGATTTGATAATATCTGGTTTGTTGGAGGAAAAGAGAAAATCCATAATTG--------GCTGTTGAG----------AAACTCGAGATGGGACTTGTACTCATGAAAGCTGAGGATCAGGAGGGCTTATGCCCACAGCCGCTG---GGCCCCAGGATGCTGGACACGTTCA-----------CCCGTGACGCGGGATG------GGTTCACTTCTTTGTTAATAAATCCATCACACGAA-------AACAGCT--GTCTCAC---CTCCGCTGTAAGAGAGGGTCAGCAAAGGCGCAGCTGTGGGAGAGTGTCACAAACTAGTGTTCAGACGCCAGGGGCCCAAGACA-------------C-AGAGCCACATTTCACTCGGGTGTGATTTGCCCAGTGAAGAGTTAAACGTGTGTTCCCTACTGAGAAACAGGAG---GCTATTTCTCACTTG--GTAAATGTCAACATGACCTGAGTGGA--CAGCATTATTCTCTCTCTCCTGTCCAGAGCTTGCAGAGAGTTT-GACCG--TCCTCCAGAAGAGTTAAGTGACCTGGCATTAAAATGACCTTTTAT-AGG-TTCAAGGCAAAATCAATCAATCCTGAGAAGCCATTCTAACCTCTCATCCTGCTGGTAGTTTTCCTTTCATTCTGAATTCCCATGTAACTGACAGAGTTACAGCAAAGGAGGTGGAGACCC-AGCCGTCAGTGGG-AGCCGTTCACT--------------------GCTGAGTGCCAGGGTCTTTGGCCAGCAGCTCTTCCTTGCCTGGTGCCCAGCTGCAGCTGGCAACATCTGTGACTGACCCTAGGGATCCTTGCC---------------------TGGTG-CCTGG--TA--CAGCTGGCAGCCTCTGCGAGTGACCC----------TGAGGATGAAGCACCCAGCGGTGGT-------GAAGGAAGGTCTGTT-AATGAGCAGAATGTGGAGAGACCAGCAGGAAGAGAAGCAGAGG--T---GGCAACAAC-----GCTTTCCACAC--------TTTCTTGCCTCGTGGTCTCATTTTTCTCTCTGCCCTTTATCCCAGGAGAGTGTTCTCCACTATTTACAACTAAACTCGGGGCTCCTGTCCTTGTTTAGCTTTAACCAAAAGTCTTGGTGGATTCA-----GACTTTCACCCA---TTTCATTCAGGAGAAGCCCAAGA--TTTCATTAAAACTGGGGTTTTAC--------AAACTTCCAATGACAAAGCCTAAATCGTCATCAGTGCTGATGG-GTTGGATCCT----------CTCATGGGGCGTCTGATC----CATGTTTACCGGGTGCCTGCTATGTCCTCTCCACC-------AGGCCTGCAGTTCTGCAAAGAAGAAAAACCCGGCTCATGCTGTCAGGGAGTGT-GGGAAAGCCATGGA----AAAGTTCTCCTGAAAAGTAAACGC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171861460 1491 + 173848474 -accaggt-ctgtctgactcaggagctgatattattcccaACATACACTAAATATTTTCTAAAAGAAAGCC-CGTAACT-AAGATCCTTTGCATCCACTAAACAGAATATAAAGCCAAGCTT-TATA---TTTTAAAAAG------TCTGGATTTT-AAAATAGATTATTTTGTAAGCCAACTGGTTAAAAAGTTCTGATGTAACTGCATGAAAATTCTAACATATCTTGTCATCTTATGATTCGATAATATCTGGTTTGTTGGAGGAAAAGAGAAAATCCATAATTG--------GCTGTTGAG----------AAACTCGAGATGGGACTTGTACTCATGAAAGCTGAGGATCAGGAGGGCTTATGCCCACAGCCGCTG---GGCCCCAGGATGCTGGACACGTTCA-----------CCCGTGACGCGGGATG------GGTTCACTTCTTTGTTAATAAATCCATCACACGAA-------AACAGCT--GTCTCAC---CTCCGCTGTAAGAGAGGGTCAGCAAAGGCGCAGCTGTGGGAGAGTGTCACAAACTAGTGTTCAGACGCCAGGGGCCCAAGACA-------------C-AGAGCCACATTTCACTCGGGTGTGATTTGCCCAGTGAAGAGTTAAACGTGTGTTCCCTACTGAGAAACAGGAG---GCTATTTCTCACTTG--GTAAATGTCAACATGACCTGAGTGGA--CAGCATTATTCTCTCTCTCCTGTCCAGAGCTTGCAGAGAGTTT-GACCG--TCCTCCAGAAGAGTTAAGTGACCTGGCATTAAAATGACCTTTTAT-AGG-TTCAAGGCAAAATCAATCAATCCTGAGAAGCCATTCTAACCTCTCATCCTGCTGGTAGTTTTCCTTTCATTCTGAATTCCCATGTAACTGACAGAGTTACAGCAAAGGAGGTGGAGACCC-AGCCGTCAGTGGG-AGCCGTTCACT--------------------GCTGAGTGCCAGGGTCTTTGGCCAGCAGCTCTTCCTTGCCTGGTGCCCAGCTGCAGCTGGCAACATCTGTGACTGACCCTAGGGATCCTTGCC---------------------TGGTG-CCTGG--TA--CAGCTGGCAGCCTCTGCGAGTGACCC----------TGAGGATGAAGCACCCAGCGGTGGT-------GAAGGAAGGTCTGTT-AATGAGCAGAATGTGGAGAGACCAGCAGGAAGAGAAGCAGAGG--T---GGCAACAAC-----GCTTTCCACAC--------TTTCTTACCTCGTGGTCTCATTTTTCTCTCTGCCCTTTATCCCAGGAGAGTGTTCTCCACTATTTACAACTAAACTCAGGGCTCCTGTCCTTGTTTAGCTTTAACCAAAAGTCTTGGTGGATTCA-----GACTTTCACCCA---TTTCATTCAGGAGAAGCCCAAGA--TTTCATTAAAACTGGGGTTTTAC--------AAACTTCCAATGACAAAGCCTAAATCGTCATCAGTGCTGATGG-GTTGGATCCT----------CTCATGGGGCGTCTGATC----CATGTTTACCGGGTGCCTGCTATGTCCTCTCCACC-------AGGCCTGCAGTTCTGCAAAGAAGAAAAACCCGGCTCATGCTGTCAGGGAGTGT-GGGAAAGCCATGGA----AAAGTTCTCCTGAAAAGTAAACGC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11544588 1489 - 12463322 -accaggt-ctgtctgactcaggagctgatattattcccaACATACACTAAATATTTTCTAGAAGAAAGCC-CATAACT-AAGATCCTTTGCATCCACTAAACAGAATATAAAGCCAAGCTT-TATA---TTTTAAAAAG------TCTGGATTTT-AAAATAGATTATTTTATAAGCCAACTGGTTAAAAAGTTCTGATGTAACTGCATGAAAATTCTAACATATCTTGTCATCTTATGATTCGATAATATCTGGTTTGTTGGAGGAAAAGAGAAAATCCATAATTG--------GCTGTTGAG----------AAACTCAAGATGGGACTTGTACTCATGAAAGCTGAGGATCAGGAGGGCTTATGCCTACAGCCGCTG---GGCCCCAGGATGCCGGACACGTTCA-----------CCTGTGACGTGGGATG------GGTTCACTTCTTTGTTAATAAATCCATCACACGAA-------AACAGCT--GTCTCAC---CTCCGCTGTA--AGAGGGTCAGCAAAGGCGCAGCTGTGGGAGAGTGTCACAAAATAGTGTGCAGACACCAGGGGCCCAAGACA-------------C-AGAGCCACATTTCACTCGGGTGTGATTTGCCCAGTGAAGAGTTAAACGTGTGTTCCCTACTGAGAAACAGGAG---GCTATTTCTCACTTG--GTAAATGTCAACATGACCTGAGTGAA--CAGCATTATTCTCTCTCTCCTGTCCAGAGCTTGCAGAGAGTTT-GACCG--TCCTCCAGAAGAGTTAAGTGACCTGGCATTAAAATGACCTTTTAT-AGG-TTCAAGGCAAAATCAATTAATCCTGAGAGGCCATTCTAACCTCTCATCCTGCTGGTAGTTTTCCTTTCATTCTGAATTCCCATGTAACTGACAGAGTTACAGCAAAGGAGGTGGAGACCC-AGCCGTCAGTGGG-AGCCGTTCACT--------------------GCTGAGTGCCAGGGTCTTTGGCCAGCAGCTCTTCCTTGCCTGGTGCCCAGCTGCAGCTGGCAACATCTGTGACTGACCCTAGGGATCCTTGCC---------------------TGGTG-CCTGG--TA--CAGCTGGCAGCCTCTGCGAGTGACCC----------TAAGGATGAAGCACCCAGCGGTGGT-------GAAGGAAGGTCTGTG-AATGAGCAGAATGTGGAGAGACCAGCAGGAAGAGAAGCAGAGG--T---GGCAACAAC-----GCTTTCCACAC--------TTTCTTGCCCCGTGGCCTCATTTTTCTCTCTGCCCTTTATCCCAGGAGAGTGTTCTCCACTATTTACAACTAAACTCGGGGCTCCTGTCCTTGTTTAGCTTTAACCAAAAGTCTTGCTGGATTCA-----GACTTTCACCCA---TTTCATTCAGGAGAAGCCGAAGA--TTTCATTAAAACTGGGGTTTTAC--------AAACTTCCAATGACAAAGCCTAAATCGTCATCAGTGCTGATGG-GTTGGATCCT----------CTCATGGGGCATCTGATC----CATGTTTACCGGGTGCCTGCTATGTCCTCTCCACC-------AGGAGTGCAGCTCTGCAAAGAAGAAAAACCCGGCTCATGCTGTCAGGGAGTGT-GGGAAAGCCATGGA----AAAGTTCTCCTGAAAAGTAAACGT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156377613 1487 + 157873769 -accaggt-ccgtctgactcaggagctgcttttgttcccaacatacgctAAATATTTTCTAAAAGAAAGCC-AGTAACT-AAGATCCTTTGCATCCACTAAACAGGATATAAAACCAAGCTT-TATA---TTTTAAAAAG------TCTGGATTTT-AAAATAGATTATTTTATAAGCCAACTGGTTAAAAAGTTCTGATGTAACTGCATGAAAATTCTAACATATCTTGTCATCTTATGATTCGATAATATCTGGTTTGTTGGAGGAAAAGAGAAAATCCATAATTG--------GCTGTTGAG----------AAACTCGCGATGGGACTTGTACTCATTAAAGCTGAGGATCAGGAGGGCTTATGCCCACAGCTGCTG---GGCCCCAGGATGCCAGACACGTTCA-----------CACGTGACGCGGGATG------GATTCACTTCTTTGTTAATAAACCCATCACACGAA-------AGCAGCT--GTCTCAC---CTCTGCTGTAAGAGAGGGTTGGCAAAGGTGCAGCTGTGGGAGAGTGTCACAAGCTGATGCA-AGACACCAGGGGCCCAAGACA-------------C-AGAGCCACATTTCACTCGGGTGTGATCTGCCCAGTGAAGAGTTAAACGTGTGTTCCCTACTGAGAAACAGGAG---GCTACTTCTCACTTG--GTAAATGTCGACATGACCTGAGTGGA--CGGTATTAT--TCTCTCTCCTGTCCAGATCTCGCAAAAAGTTT-GACCG--TCCTCCAGAATAGTTAAGTGACCTGGCATTAAAATGACCTTTTAT-AGG-TTCAAGGCAAAATCAATCAATCCTGAGAAGCCATTCTAACCTCTCATCCTGCTGGTAGTTTTCCTTTCATTCTAAATTCCCATGTGACTGACAGAGTTATAGCAAAGGAGGTGGAGACCC-AGCCGTCAGTGGA-AGCCGTTCACT--------------------GCTGAGTGCCAGGGTCTTTGGCCAGCAGCTCTTCCTTGCCTGGTGCCCGGCTGCAGCTGGCAACCTCTGTGACTGACCCTAGGGATCCTTTCC---------------------TGGTG-CCTCG--TA--CAGCCGGCAGCCTCTGTGAGTGACCC----------TGAGGATGAAGCACCCAGCAGTGGT-------GAAGGAAGGTCTGTT-AATGAGCAGAATGTGGAGACACCAGCAGGAAGAGAAGCAGAGG--T---GGCAACAAC-----GCTTTCCACAC--------GTTCTTGCCTCGTGGTCTCATTTTTCTCTCTGCCCTTTATCCCAGGAGAGTGTTCTCCACTATTTGCAACTAAACTCGGGGCTCCTGTCCTTGTTTAGCTTTGACCAACGGTCTTGGTGGATTCA-----GGCTTTCACCCA---TTTCATTCAGGAGAAACCCAAGA--TTTCATTAAAACTGGGGTTTTAC--------AAACTTCCAATGACAGAGCCTAAATCATCATCAGTGCTGATGG-GTTGGATCCT----------CTCATGGGGCATCTGATC----Cacatttactgggtgcctgctatgtcctctccacc-------aggtgtgcagctc-gcaaagaagaaacacctagctcgtgctctcagggagTGT-GGGAAAGCCATGGA----AAAGTTCTCCTGAAAAGTAAACAC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170405035 1490 + 172585720 -accaggt-ctgtctgactcaggagctggtattgctcccaACATACACTAAATATTTTCTAAAAGAAAGCC-AGTA-----------TTTGCATCCACTAAATAGAATATAAAGCCAAGCTT-TATA---TTTTTAAAAG------TCTGGATTTT-AAAATAGATTATTTCATAAGCCAACTGGTTAAAAAGTTCTGATGTAACTGCATGAAAATTCTAACATATCCTGTCATCTTATGATTTGATGACATCTGGTTTGTTGGAGGAAAAGAGAAAATCCATAATTG--------GCTGTTGAG----------AAACTTGAGATGGGATTTGTAGTCATTAAAGCTGAGGATCAGGAGGGCTTATGCCCACAGCCAGTG---GGCCCCAGGATGCTGGACACGTTTG-----------CCTGTGATACGGGATG------GGTTCACCTCTTTGTTAACAAACCCATCGCCCGAA-------AGCGGCT--GTCTCAC---CTCCACTGTAAGAGAGGGTCGGCAAAGGCACAGCTATGGGAGAGTGTCACAAACTGGTGCACAGATGCCAGGGGTCCAAGACA-------------C-AGAGCCACATTTCACTCTGGTGTGATCTGCCCAGTGAGGAGTTAAACATGTGTTCCCTACCGAGAAACGGGAG---GCTATTTCTCACTTG--GTAAATGTCGACATGACCTGAGTGGA--CAGCATTATTCTCACTCTCCTGTCCAGAGCTCGCAGAGAGTTT-GATCA--TCCTCCAGGAGAGTTAAGTGACCTGGCATTAAAACGACCTTTTAT-GGG-TTCAAGGCAAAATCAATCAATCCTGAGATGCCATTCTAACCTCTCATCCTGCTGGTGG-TTTCCTTTCACTCTGAATT-CCATGTAACTGACAGAGTTACAGCAAAGGAGGTGGAGACCC-AGCCGTCAGTGGG-AGCCATTTGCT--------------------GCTGAATGCCAGGGTC-TAGGCCAGCAGCCCTTCCTTGCCTGGTGCCCGGCTGCAGCTGGCAACATCTGTGACTGACCCTAGGGATCCTTGCC---------------------TGGTG-TCTGGC-TA--CCGCTGGCAGCCTCTGTGAGTGACCC----------TGAGGATGAAGCACCCAACGGTGGT-------GAAGGAAGGTCTGTT-AACGAGCAGAATGTGGAGAGACCAGCAGGAACAGAAGCAGAGG--TGGCGGCAACAAC-----GCTTTCCACAC--------TTTCTTGCCTCGTGGTCTCATTTTTCCCTGCGCCCTTTATCCCAGGAGAGTGTTCTCCACTATTTACAACTAAACTTGGGGCTCCTGTCCTTGCTTAGCTTTGACCAAC-GTCTTGGAGGATTCA-----GGCTTTCACCCA---TTTCATTGAGGAGAAGCCCAAGA--TTTCATTAAAACTGGAGTTTTAC--------AAAGTTCCAATGACAGAGCCTAAATCATCATCAGTGCTGATGG-CTTGGATCCTGGGCCATCAGCCCAGGGGGCGTCTGATC----CATGTTTACCGGGTGCCCGCTATGTCCTCTCCACC-------AGGCATGCAGCTCTGCAAAGAAGAAA-ACCCGGCTCATGCTCTCAGGGAGTGT-GGGAAAGCCATGGA----AAAGTTCTCCTGAAAAGTGAACAC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169148316 1490 - 170955103 -accaggt-ctgtctgactcaggagctggtattgctcccaACATACACTAAATATTTTCTAAAAGAAAGCC-AGTA-----------TTTGCATCCACTAAATAGAATATAAAGCCAAGCTT-TATA---TTTTTAAAAG------TCTGGATTTT-AAAATAGATTATTTCATAAGCCAACTGGTTAAAAAGTTCTGATGTAACTGCATGAAAATTCTAACATATCCTGTCATCTTATGATTTGATGACATCTGGTTTGTTGGAGGAAAAGAGAAAATCCATAATTG--------GCTGTTGAG----------AAACTTGAGATGGGATTTGTAGTCATTAAAGCTGAGGATCAGGAGGGCTTATGCCCACAGCCAGTG---GGCCCCAGGATGCTGGACACGTTCG-----------CCCGTGATACGGGATG------GGTTCACCTCTTTGTTAACAAACCCATCGCCCGAA-------AGCGGCT--GTCTCAC---CTCCACTGTAAGAGAGGGTCGGCAAAGGCACAGCTATGGGAGAGTGTCACAAACTGGTGCACAGATGCCAGGGGTCCAAGACA-------------C-AGAGCCACATTTCACTCTGGTGTGATCTGCCCAGTGAGGAGTTAAACATGTGTTCCCTACCGAGAAACAGGAG---GCTATTTCTCACTTG--GTAAATGTCGACATGACCTGAGTGGA--CAGCATTATTCTCACTCTCCTGTCCAGAGCTCGCAGAGAGTTT-GATCA--TCCTCCAGGAGAGTTAAGTGACCTGGCATTAAAACGACCTTTTAT-GGG-TTCAAGGCAAAATCAATCAATCCTGAGATGCCATTCTAACCTCTCATCCTGCTGGTAG-TTTCCTTTCACTCTGAATT-CCATGTAACTGACAGAGTTACAGCAAAGGAGGTGGAGACCC-AGCCGTCAGTGGG-AGCCATTTGCT--------------------GCTGAATGCCAGGGTC-TAGGCCAGCAGCCCTTCCTTGCCTGGTGCCCGGCTGCAGCTGGCAACATCTGTGACTGACCCTAGGGATCCTTGCC---------------------TGGTG-TCTGGC-TA--CCGCTGGCAGCCTCTGTGAGTGACCC----------TGAGGATGAAGCACCCAACGGTGGT-------GAAGGAAGGTCTGTT-AACGAGCAGAATGTGGAGAGACCAGCAGGAACAGAAGCAGAGG--TGGCGGCAACAAC-----GCTTTCCACAC--------TTTCTTGCCTGGTGGTCTCATTTTTCCCTCCGCCCTTTATCCCAGGAGAGTGTTCTCCACTATTTACAACTAAACTCGGGGCTCCTGTCCTTGCTTAGCTTTGACCAAC-GTCTTGGAGGATTCA-----GGCTTTCACCCA---TTTCATTGAGGAGAAGCCCAAGA--TTTCATTAAAACTGGGGTTTTAC--------AAACTTCCAATGACAGAGCCTAAATCATCATCAGTGCTGATGG-CTTGGATCCTGGGCCATCAGCCCAGGGGGCGTCTGATC----CATGTTTACCGGGTGCCCGCTATGTCCTCTCCACC-------AGGCATGCAGCTCTGCAAAGAAGAAA-ACCCGGCTCATGCTCTCAGGGAGTGT-GGGAAAGCCATGGA----AAAGTTCTCCTGAAAAGTGAACAC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8434675 1490 + 10161646 -accaggt-ctgtctgactcaggagctggtattgctcccaACATACACTAAATATTTTCTAAAAGAAAGCC-AGTA-----------TTTGCATCCACTAAATAGAATATAAAGCCAAGCTT-TATA---TTTTTAAAAG------TCTGGATTTT-AAAATAGATTATTTCATAAGCCAACTGGTTAAAAAGTTCTGATGTAACTGCATGAAAATTCTAACATATCCTGTCATCTTATGATTTGATGACATCTGGTTTGTTGGAGGAAAAGAGAAAATCCATAATTG--------GCTGTTGAG----------AAACTTGAGATGAGATTTGTAGTCATTAAAGCTGAGGATCAGGAGGGCTTATGCCCACAGCCAGTG---GGCCCCAGGATGCTGGACACGTTCG-----------CCCGTGATACGGGATG------GGTTCACCTCTTTGTTAACAAACCCATCGCCCGAA-------AGCGGCT--GTCTCAC---CTCCACTGTAAGAGAGGGTCGGCAAAGGCACAGCTATGGGAGAGTGTCACAAACTGGTGCACAGATGCCAGGGGTCCAAGACA-------------C-AGAGCCACATTTCACTCTGGTGTGATCTGCCCAGTGAGGAGTTAAACATGTGTTCCCTACCGAGAAACAGGAG---GCTATTTCTCACTTG--GTAAATGTCGACATGACCTGAGTGGA--CAGCATTATTCTCACTCTCCTGTCCAGAGCTCGCAGAGAGTTT-GATCA--TCCTCCAGGAGAGTTAAGTGACCTGGCATTAAAACGACCTTTTAT-GGG-TTCAAGGCAAAATCAATCAATCCTGAGATGCCATTCTAACCTCTCATCCTGCTGGTAG-TTTCCTTTCACTCTGAATT-CCATGTAACTGACAGAGTTACAGCAAAGGAGGTGGAGACTC-AGCCGTCAGTGGG-AGCCATTTGCT--------------------GCTGAATGCCAGGGTC-TAGGCCAGCAGCCCTTCCTTGCCTGGTGCCCGGCTGCAGCTGGCAACATCTGTGACTGACCCTAGGGATCCTTGCC---------------------TGGTG-TCTGGC-TA--CCGCTGGCAGCCTCTGTGAGTGACCC----------TGAGGATGAAGCACCCAACGGTGGT-------GAAGGAAGGTCTGTT-AACGAGCAGAATGTGGAGAGACCAGCAGGAACAGAAGCAGAGG--TGGCGGCAACAAC-----GCTTTCCACAC--------TTTCTTGCCTCGTGGTCTCATTTTTCCCTCCGCCCTTTATCCCAGGAGAGTGTTCTCCACTATTTACAACTAAACTCGGGGCTCCTGTCCTTGCTTAGCTTTGACCAAC-GTCTTGGAGGATTCA-----GGCTTTCACCCA---TTTCATTGAGGAGAAGCCCAAGA--TTTCATTAAAACTGGGGTTTTAC--------AAACTTCCAATGACAGAGCCTAAATCATCATCAGTGCTGATGG-CTTGGATCCTGGGCCATCAGCCCAGGGGGCGTCTGATC----CATGTTTACCGGGTGCCCGCTGTGTCCTCTCCACC-------AGGCATGCAGCTCTGCAAAGAAGAAA-ACCCGGCTCATGCTCTCAGGGAGTGT-GGGAAAGCCATGGA----AAAGTTCTCCTGAAAAGTGAACAC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1464827 1482 + 3144229 -accaggt-ctgtctgactcaggagctagtattgctcccaACATACACTAAATATTTTCTAAAAGAAAGCC-AGTA-----------TTTGCATCCACTAAATAGAATATAAAGCCAAGCTT-TTTA---TTTTTAAAAG------TCTGGATTTT-AAAATAGATTATTTCATAAACCAACTGGTTAAAAAGTTCTGATGTAACTACATGAAAATTCTAACATATCCTGTCATCTTATGATTCGATGATATCTGGTTTGTTGGAGGAAAAGAGAAAATCCATAATTG--------GCTGTTGAG----------AAACTTGAGATGGGATTTGTAGTCATTAAAGCTGAGGATCAGGAGGGCTTATGCCCACAGCCAGTG---GGCCCCAGGATGCTGGACACGTTCG-----------CCCGTGATACGGGATG------GGTTCACCTCTTTGTTAACAAACCCATCGCCCGAA-------AGCGGCT--GTCTCAC---CTCCACTGTAAGAGAGGGTCCGCAAAGGCACAGCTGTGGGAGAGTGTCACACACTGGTGCACAGATGCCAGGGGTCCAAGACA-------------C-AGAGCCACATTTCACTCTGGTGTGATCTGCCCAGTGAGGAGTTAAACATGTGTTCCCTACCGAGAAACAGGAG---GCTATTTCTCACTTG--GTAAATGTCGACATGACCTGAGTGGA--CAGCATTATTCTCACTCTCCTGTCCAGAGCTCGCAGAGAGTTT-GATCA--TCCTCCAGGAGAGTTAAGTGACCTGGCATTAAAATGACCTTTCAT-GGG-TTCAAGGCAAAATCAATCAATCCTGAGATGCCATTCTAACCTCTCATCCTGCTGGTAG-TTTCCTTTCACTCTGAATT-CCATGTAACTGACAGAGTTACAGCCAAGGAGGTGGAGACCC-AGCCGTCAGTGGG-AGCCATTTGCT--------------------GCTGAATGCCAGGGTCTTTGGCCAGCAGCCCTTCCTTGCCTGGTGCCCGGCTGCAGCTGGCAACATCTGTGACTGACCCTAGGGATCCTTGCC---------------------TGGTG-TCTGGC-TA--CCGCTGGCAGCCTCTGTGAGTGACCC----------TGAGGATGAAGCACCCAACGGTGGT-------GAAGGAAGGTCTGTT-AATGAGCAGAATGTGGAGAGACCAGCAGGAAGAGAAGCAGAGG--TGGCGGCAACAAC-----GCTTTCCACAC--------TTTCTTGCCTCATGGTCTCATTTTTCCCTCCGTCCTTTATCCCAGGAGAGTGTTCTCCACTATTTACAACTAAACTCAGGGCTCCTGTCCTTGCTTAGCTTTGACCAAC-GTCTTGGAGGATTCA-----GGCTTTCACCCA---TTTCATTGAGGAGAAGCCCAAGA--TTTCATTAAAACTGGGGTTTTAC--------AAACTTCCAATGACAGAGCCTAAATCATCATCAGTGCTGATGG-CTTGGATCCT----------CTCATGGGGCGTCTGATC----CATGTTTACCGGGCGCCCGCTATGTCCTCTCCACC-------AGGCATGCAGCTCTGCAAAGAAGAAACACCCGGCTCATGCTCTCAGGGAGTGT-GGGAAAGCCATGGA----AAAGTTCTCCTGAAAAGTAAACAC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96750087 1477 + 98384682 -accaggt-ctgtctcactcaggagctggtattgctcccaACATACACTAAATATTTTCTAACAGAAAGCC-AGTA-----------TTTGCATCCACTAAATAGAATACAAAGCCAAGCTT-TATA---TTTTTAAAAG------TCTGGATTTT-AAAATATATTATTTCATAAGCCAACTGGTTAAAAAGTTCTGATGTAACTGCATGAAAATTCTAACATATCCTGTCATCTTATGATTCGATGATATCTGGTTTGTTGGAGGAAAAGAGAAAATCAATAATTG--------GCTGTTGAG----------AAACTTGA-----GATTTGTAGTCATTAAAGCTGAGGATCAGGAGGGCTTACGCCCACAGCCGCTG---GGCCCCAGGATGCTGGACACGTTCG-----------CTCATGATACGGGATG------GGTTCACTTCTTTGTTAATAAACCCATCGCCCGAA-------AGTGGCT--GTCTCAC---CTCCACTGTAAGAGAGGGTCGGCAAAGGCACAGCTGTGGGAGAGTGTCACACACTGGTGCACAGATGCCAGGGGTCCAAGACA-------------C-AGAGCCACATTTCACTCTGGTGTGATCTGCCCAGTGAGGAGTTAAACGTGTGTTCCCTACCGAGAAACAGGAG---GCTATTTCTCACTTG--GTGAATGTCGACATGACCTGAGTGGA--CAGCGTTATTCTCACTCTCCTGTCCAGAGCTCGCAGAGAGTTT-GATCA--TCCTCCAGGAGAGTTAAGTGACCTGGCATTAAAATGACCTCTTAT-GGG-TTCAAGGCAAAATCAATCAATCCTGAGATGCCATTCTAACCTCTCATCCTGCTGGTAG-TTTCGTTTCACTCTGAATT-CCATGTAACTGACAGAGTTACAGCAAAGGAGGTGGAGACCC-AGCCGTCAGTGGG-AGCCATTTGCT--------------------GCTGAATGCCAGGGTCTTTGGCCAGCAGCCCTTCCTTGCCTCGTGCCCGGCTGCAGCTGGCAACATCTGTGACTGACCCTAGGGATCCTTGCC---------------------TGGTG-TCTGGC-TA--CCGCTGGCAGCCTCTGTGAGTGACCC----------TGAGGATGAAGCACCCAACGGTGGT-------GAAGGAAGGTCTGTT-AATGAGCAGAATGTGGAGAGACCAGCAGGAAGAGAAGCAGAGG--TGGCGGCAACAAC-----GCTTTCCACAC--------TTTCTTGCCTCGTGGTCTCATTTTTCTCTCGGCCCTTTATCCCAGGAGAGTGTTCTCCACTATTTACAACTAAACTCCGGGCTCCTGTCCTTGCTTAGCTTTGACCAAC-GTCTTGGAGGATTCA-----GGCTTTCACCCA---TTTCATTGAGGAGAAGCCCAAGA--TTTCATTAAAACTGGGGTTTTAC--------AAACTTCCAATGACAGAGCCTAAATCATCATCAGTGCTCATGG-CTTGGATCCT----------CTCATGGGGCGTCTGATC----CATGTTTACTGGGTGCCCCCTATGTCCTCTCCACC-------AGGCATGCAGCTCTGCAAAGAAGAAAAATCCGGCTCATGCTCTCAGGGAGTGT-GGGAAAGCCAGGGA----AAAGTTCTCCTGAAAAGTAAACAC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8313595 1481 - 10857215 -accaggt-ctgtctgactcaggagctggtattgctcccaACATACACTAAATATTTTCTAAAAGAAAGCC-AGTA-----------TTTGCATCCACTGAATAGAATATAAAGCCAAGCTT-TATA---TTTTTAAAAG------TCTGGATTTT-AAAATAGATTATTTCATAAGCCAACTGGTTAAAAAGTTCTGATGTAACTGCATGAAAATTCTAACATATCCTGTCATCTTATGATTCGATGATATCTGGTTTGTTGGAGGAAAAGAGAAAATCCATAATTG--------GCTGTTGAG----------AAACTTGAGATGGGATTTGTAGTCATTAAAGCTGAGGATCAGGAGGGCTTATGCCCACAGCCAGTG---GGCCCCAGGATGCTGGACACGTTCG-----------CCCGTGATATGGGATG------GGTTCACCTCTTTGTTAACAAACCCATCACCCAAA-------AGCGGCT--GTCTCAC---CTCCACTGTAAGAGAGGGTCCGCAAAGGCACAGCTGTGGGAGAGTGTCACACACTGGTACACAGATGCCAGGGGTCCAAGACA-------------C-AGAGCCACATTTCACTCTGGTGTGATCTGCCCAGTGAGGAGTTAAACATGTGTTCCCTACCGAGAAACAGGAG---GCTATTTCTCACTTG--GTAAATGTCGACATGACCTGAGTGGA--CAGCATTATTCTCACTCTCCTGTCCAGAGCTCGCAGAGAGTTT-GATCA--TCCTCCAGGAGAGTTAAGTGACCTGGCATTAAAATGACCTTTTAT-GGG-TTCAAGGCAAAATCAATCAATCCTGAGATGCCATTCTAACCTCTCACCCTGCTGGTAG-TTTCCTTTCACTCTGAATT-CCATGTAACTGACAGAGTTACAGCAAAGGAGGTGGAGACCC-AGCCGTCAGTGGG-AGCCATTTGCT--------------------GCTGAATGCCAGGGTC-TAGGCCAGCAGCCCTTCCTTGCCTGGTGCCCGGCTGCAGCTGGCAACATCTGTGACTGACCCTAGGGATCCTTGCC---------------------TGGTG-TCTGGC-TA--CCGCTGGCAGCCTCTGTGAGTGACCC----------TGAGGATGAAGCACCCAACGGTGGT-------GAAGGAAGGTCTGTT-AACGAGCAGAATGTGGAGAGACCAGCAGGAAGAGAAGCAGAGG--TGGCGGCAACAAC-----GCTTTCCACAC--------TTTCTTGCCTCATGGTCTCATTTTTCTCTCCGCCCTTTATCCCAGGAGAGTGTTCTCCACTATTTACAACTAAACTCGGGGCTCCCGTCCTTGCTTAGCTTTGACCAAC-GTCTTGGAGGATTCA-----GGCTTTCACCCA---TTTCATTGAGGAGAAGCCCAAGA--TTTCATTAAAACTGGGGTTTTAC--------AAACTTCCAATGACAGAGCCTAAATCATCATCAGTGCTGATGG-CTTGGATCCT----------CTCATGGGGCGTCTGATC----CATGTTTACCGGGTGCCCGCTATGTCCTCTCCACC-------AGGCATGCAGCTCTGCAAAGAAGAAACACCCGGCTCATGCTCTCAGGGAGTGT-GGGAAAGCCATGGA----AAAGTTCTCCTGAAAAGTGAACAC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15672595 1432 - 23502949 -accaggt-ctgtctgactcaggagctggtattgctcccaACATACACTAAATATTTTCTAAAAGAAAGCC-AGTA-----------TTTGCATCCACTAAATAGAATATAAAGCCAAGCTT-TATA---TTTTTAAAAG------TCTGGATTTT-AAAATAGATTATTTCATAAGCCAACTGGTTAAAACGTTCCGATGTAACTGTATGAAAATTCTAACATATCCTGTCATCTCATGATTTGATGATATCTGGTTTATTGGAGGAAAAGAGAAAATCCATAATTG--------GCTGTTGAG----------AAACTTGAGATGGGATTTGTAGTCATTAAAGCTGAGGATCAGGAGGACTTATGCCCACAGCCGCTG---GGCCCCAGCA-GCTGGACACGTTCG-----------CCCGTGATACGGGACG------GGTTCACTTCTTTGTTAACAAACCCATCACCCGAA-------AGCGGCT--GTCTCGC---CTCCACTGTAAGAGAGGGTCGGCAAAGGCACAGCTGTGGGAGAGTGTCACACACTGGTGCACAGATGCCAGGGGTCCAAGACA-------------C-AGAGCCACATTTCACTCTGGTGTGATCTGCCCAGTGAGGAGTTAAACGTGTGTTCCCTACTGAGAAACAGGAGGCTGCTATTTCTCACTTG--GTAAATGTCGACATGACCTGAGAGGA--CAGCATTATTCTCACTCTCCTGTCCAGAGCTCGCAGAGAGTTT-GGTCA--TCCTCCAGGAGAGTTAAGTGACCTGGCATTAAAATGACCTTTTAT-GGG-TTCAAGGCAAAGTCAATCAATCCTGAGATGCCATTCTAACCTCTCATCCTGCTGGTAGTTTTCCTTTCACTCTGAATT-CCATGTAACTGACAGAGTTACAGCACAGGAGGTGGAGACCC-AGCTGTCAGTGGG-AGCCATTTGCT--------------------GCTGAGCGCCAGGGTCTTTGGCCAGCAGCCCTTCCTTGCCTGGTGCCCAGCTACA------------------------------------------------------------------------------GCCAGCAGCCTCTGTGAGTGACCC----------TGAGGATGAAGCACCCAATGGTGAT-------GAAGGAAGGTCTGTT-AACGAGCAGAATGTGGAGACACCAGTAGGAAGAGAAGCAGAGG--TGGTGGCAACAAC-----GCCTTCCACAC--------TTTCTTGCCTCGTGGTCTCATTTTTCTCGCCGCCCTTAATCCCAGGAGAGTGTTCTCCACTATTTACAACTAAACTCGGGGCTCTTGTCCTTGCTTAGCTTTGACCAAC-ATCTTGGAGGATTCA-----GGCTTTCACCCA---TTTCATTCAGGAGAAGCCCAAGA--TTTCACTAAAAGTGGGGTTTTAC--------AAACTTCCAATGACACAGCCTAAATCATCATCAGTGCTGATGG-CTTGGATCCT----------CTCATGGGGCATCTGATC----CATGTTTACCGGATGCCCACTACGTCCTCTCCACC-------AGGCATGCAACTCTGCAAAGAAGAAAAACCCGGCTCATGCTCTCAGGGAGTGT-GGGAAAGCCATGGA----AAAGTTCTCCTGAAAAGTAAACAC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169960353 1329 + 171630274 -acccggc-ctgtctgactcaggggctgctattgttccc-acGTACGCTAAAGGTTTTCTAAAAGAAAGCC-AGTACTT-AGGGTCCTTTGCGTCCACTAAGTACAATATAAAGTCAAACTTCTGTATTCTTTTTGAAAG------TCTGGATTTT-AAAATAGATTATTTTATAAGCCAACCGGTTAAAAAGCTCTGATGTAACTGCACGAAAATTCTAACATAGCCTGTAATT--------------TACCTGGTTTGTTGGAGGAAAAGAGAAAATCCATAATTG--------GCTGTTGAG----------AAACTCGAGACAGGACTCATACTCGCTAAAGCTGGGGATCAGCAGGGCTTGTGCC-ACAGCTGCCG---GGCCCCG----------------------------------GACGCAGGATG------GGTTCACGTCCTTGTTAATAAACCAGTCACACGAA-------AACTGCT--GTCTCAC---CTCCACTGTAAGAG-----------GTGCGCAGCTTGGGGAGGATGTCACAGATTAATGCGCAGGTGCCCGGCACCCACAACG-------------G-CGAGCTCCATTTCACTCTGGTGTGATTTG--------------------------CCTACCAAGAAACAGGAG---GCGATTTCTCCCTTG--GCAAATGTTGAAATGACGTGCGTGGA--CGGCATTATCCTCACTCTCCTGTCCAGACCTCGCAGAGAGTCT-GATCG--TTCTCCAGTAGAGTTAAGTGACCTGGCATTAAAATGACCTTTTGT-AGG-TTCAAGGCAAAATCAACAAA--------------------------TCCTGCTGACAG-TTTTCTTTCATTCTGAACTCCCGTGTAACTGACAGAGTCACCTCAAAAGCAGCCGCGACCC-AGCGGTCAGTGGG-AGCTGTTCACT--------------------GCCGAGTCCCAGGGTC-TCGGCCAGCAGGTCTTCCTTGCCTGGTGCCCAGCTGCAGCTGGTGACATC--------------------------------------------------------------------------CCTC----AGTGACTC----------TGAGTATGAAGTA-------------------GTAGGAAGCTCTGTT-GACGAGCACAATGTGAGGAGACCAGCAGGAAGGGAAGCAGAGG--T---GGCAACAAG-----GCTTTTCACAC--------TTTCTCATCCTGTGGCCTTATTTTCCT-TCTGCCCTTTATCCTGGGAGAGTGTTTCCTGCAATTTACATCTAAGCTCGGGGCTCCTGTCCTTCTCCGGCTTTGACCAACAGTCTTCGTGGATTCA-----AGCTTTCACCCA---TTTCATTCAGGAGAAGCCCAGGA--TTTCATTAAAAATGGGGTTTTAC--------AAACTTCCAACGCGAGACCCTACATCATCCTCAGTGCTGACAG-GTTGAATCCT----------CTCACACGGCGTCTCATC----TGTGTTTACCGGGTGCCCGCTCCGTCCTCTCCACTTCGAGCTGGGCGTGCACCTTTGCAAAGAAGAAAAACCC-GCTCATGCGCTCAGGGAGCAT-GGGAAAGCCTTGGA----AAA---CTTCTGAAAAGTGAACAC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1358483 1358 - 2905041 -accctgt-ctgtctgactcaggagctggtggtgttccc-acATATGCTAAAGATTTTCTAAAAGAAAGCC-AGTAATT-AAGATCCTTTGCATCCACTAGGTAGAATATAAAGCCAAACTTCTGTATTCTTTTTTAAAG------TCTGGATTTT-AAAATAGATGATTTTATAAGCCAATCGGTTGAAAAGCTCTGATGTAACTACACGAAAATTCTAACATATCCTGTAATTTTATGACTGGATAATATCTGGTTTGTGGGAGGAAAAGAGAAAATCCACAATTG--------GCTGTTGAG----------AAACTCGAGACAGGACTCATACTCGCTAAAGCTGGGGATCAGGCGGGCTTGCGCC-ACAGCTGCCC---GGCCCAG----------------------------------GATGCAGGACG------GGTTCACGTCCTTGTTAATAAACCGGTCACGCAAA-------AACTGCT--GTCTCAC---CTCCACTGTAAGAG-----------GTGCTCAGCTTGGGG-GGGTGTCACAAATTAATGCACAGGTGCCCGGCACCCACGACA-------------G-CAAGGCCCATTTCACTCTAGTGTGATTTG--------------------------CCCACCAAGAAACAGGAG---GCGATCTCTCCCTTG--GCAAATGTTGAAGTGAGCTCCGTGGA--TGGCGTTATCCTCACTCTCCTGTGCAGACCTCGC--AGAGTCT-GATCA--TCCTCCAGCAGAGTTAAGTGACCTGGCATTAAAATGACCTTTTGT-AGG-TTCAAGGCAAAATCAATAAATCCTGAGATGCCACTCTAACCCCTCGTCCTGCTGCTAG-TTTTCTTTCACTCTGAACTCCCATGTACCTGACAGAGTCACCGCAAAAGGAGTGGTGACCC-AGCGGTCAGCGGG-AGCTGTTCACA--------------------GCCGAGTGTCAGGGTC-TCG------------------------GCCCAGCTGCAGCCGGTGGCATC--------------------------------------------------------------------------TCTC----AGTGACTC----------TGAGGATGAAGCACCCAGCAG---T-------GAAGGAACGTCTGTT-GACGAGCAGAACGTGAGGGGACCAGCAGGAAGGGAAGCAGAGG--C---GGGAACAAT-----GCCTTCCACAC--------TTTCTCCTCCTGTGGCCGCATTTTCCTCTCTGCCCTTTATCCCGGGAGAGTGTTCCCCACAATTTACAACTAAACTCGGGGCTCCTGTCCTTGTCCGGCCTTGACCAACAGTCTTCGTGGATTCGGGCTCAGCTTTCACCCA---TTCCATTCAGGAGAAGCCCAGGA--TTTCATTAAAAACGGGGTTTTAC--------AAACTTCCAGCGAGAGACCCTGCATCATGCTCAGTGCCGGCGG-GTCGGATGCT----------GTCACG-GGCGTCCGGTC----TGTGTTTACCGGGCGCCCGCTCCGTCCTCTCCACTGCGTGTGGGGCGCGCAGCTCTGCAAAGAAGAGACGCCC--CTCATGCGCTCAGGGAGTGT-GGGAAAGCCTCGGC----AAAGGTCTCCCGAAAAGGGAACAG i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1323743 1378 - 2164891 -acccggt-ctgtctgactcaggagctggtggtgttccc-acATACGCTAAAGATTTTCTAAAAGAAAGCC-AGTAATT-AAGATCCTTTGCATCCACTAAGTAGAATATAAAGCCAAACTTCTGTATTCTTTTTTAAAG------TCTGGATTTT-AAAATAGATTATTTTATAAGCCAATAGGTTAAAAAGCTCTGATGTAACTGCATGAAAATTCTAACATATCCTGTAATTTTATGACTCGATAATATCTGGTTTGTTGGAGGAAAAGAGAAAATCCATAATTG--------GCTGTTGAG----------AAACTCGAGACAGGACTCATACTCACTAAAGCTGGGGATCAGGAGGTCTTGTGCC-ACAGCTGCCG---GGCCCAG----------------------------------GACACAGGACG------GGTTCA-GTCCTTGTTAATAAACCGGTCACACGAA-------CACTGCC--GTCTCAC---C-------TAAGAG-----------GTGCGCAGCTTGGGG-AGATGTCACAAATTAATGCGCAGGTGCCCGGCACCCACGACA-------------G-CGAGCCCCATTTCAGTCTGGTGTGATTTG--------------------------CCTACCAAGAAACAGGAG---GCGATCTCTCCCTCG--GCAAATGTTGAAATGACCTGCGCGGA--TGGCGTTATCCTCACCCTCCGGTCCAGACCTCGCAGAAAGTCT-GATCA--TCCTCCAGCAGAGTTAAGTGACCTGGCATTAAAATGACCTTTTGT-AGG-TTCAAGGCAAAATCAATAAATCCTGAGATGCCACTCTAACCTCTCATCCTGCTGGTAG-TTTTCTTTCACTCTGAACTCCCGTGTAACTGACAGAGTCACCGCAAAAGCAGTGGCCACCC-AGCGGTCAGCGGG-AGCTGTTCACG--------------------GCTGAGTCCCAGGGTC-TCGGCCAGCAGGTCTTCCTTGCCTGGTGCCCAGCTGCAGCTGCTGGCATC--------------------------------------------------------------------------CCTC----AGTGACTC----------TGAGGATGAAGCACCCAGCAG---T-------GAAGGAAGGTCTGTT-GACGAGCAGAATGTGAGGAGACCAGCAGGAAGGGAAGCAGAGG--C---AGCAACAAC-----GCTTTCCACAC--------TTGCCGGTCCTGTGGCCTCATTTTCCTCTCTGCCCTTTACCCCAGGAGAGTGTTTCCCACAATTTACAACTAAACTCGGAGCTCCTGTCCTTGTCCGGCTTTGACAGACAGTCTTTGTGGATTCAAGCTTAGCTTTCACCCA---TTTCATTCAGGAGAAGCCCAAGG--TTTCATTAAAAATGGGGTTTTAC--------AAACTTCCAGCGACAGACCCTACATCATGCTCTGTGCTGACGA-GTTGGATCCT----------CTCACGGGGTGACCAATC----TGTGTTTACCCGATGCCCGCTCCGTCCTCTCCACTGCGTGTTGGGCATGCAGCTCTGCAAAGAAGAAAAACCC-GCTCATGCGCTCCGGGAGCGT-GGGACAGCCTTGGA----AAACTTCTCCCGAAAAGTAAACAC i cebCap1.NW_016107695v1 C 0 I 22 s aotNan1.NW_018494782v1 1570105 1362 - 1813869 -acccggt-ctgtctgactcaggagctggtgttgttccc-acatacactaAAGATTTTCTAAAAGAAAGCC-AGTAATT-AAGATCCTTTGCATCCACTAAGTAGAATATAAAGCCAAACTTCTGTATGCTTTTTTAAAG------TCTGGATTTT-AAAATAGATTATTTTATAAGCCAACCGGTTAAAAAGCTCTGATATAACTGCACGAAAATTCTAACATATCCTGTAATTTTATGACTCGATAATAACTGGTTTGTTGGAGGAAAAGAGAAAATCCATAATTG--------GCTGTTGAG----------AAACTCAAGACAGGACTCA------CTAAAGCT-GGGATCAGGAGGGCTTGCGCC-ATCGCGGCCG---GG-CCAG----------------------------------GACGCAGGACG------GGTTCACGTCCTTGTTAATCAACTGGTCACATGAA-------AAGCGCT--GTCTCAC---CTCCACTGTAAGAG-----------GTGCACAGCTTGGGGGGGATGTCACAAATTAATGCACAGGTGCCCAGCACCCACGACA-------------G-CGAGCCCCGTTTCACTCTGGTGTGATTTG--------------------------CCTACCAAGAAACAGGAG---GCGATCTCTCCCTTG--GCAAATGTTGAAATGACCTGCGTGGA--TGGCATTATGCTCGCTGTCCTGTCCAGACCTCGC--GGAGTCT-GATCG--TTCTTCAGTAGAGTTAAGTGACCTGGCATTAAAATGATCTTTTGT-AGG-TTCAAGGCAAAATCAATAAATCCTGAGATGCCACTCTAACCTCTCGTCCTGCTGAGAG-TTTTCTTTCACTCTGAACTCCCGTGTAACTGACAGAGTCACTGC-AAAGCAGTGGCGACCC-AGTGGTCAGTGGG-AGCTGTTCACT--------------------GCCGAGTCCCAGGGTC-TCGGCCAGCAGGTCTTCCTTGCCTGGTGCCCAGCTGCAGCTGGTGGCATC--------------------------------------------------------------------------CCTC----AGTGACTC----------TGAGGATGAAGCACCCAGCAG---T-------GAAGGAAGGTCTGTT-GACGAGCAGAATGTGAGGAGACCAGCAGGAAGGGAAGCAGAGG--C---GGCAACAAC-----GCTCTCCACAC--------TTTTTC-----GTGGCCTCATTTTCCTCTCTGCCCTTTATCCC-GGAGAGTGTTTCCCACAATTTACAACTAAACTTGGGGCTCCTGTCCTTGTCCAGCTTTGACCAACAGTCTTCGTGGATTCA-----AGCTTTCACCCA---TTTCATTCAGGAGAAGCCCAGGG--TTTCATTAAAAATGGGGTTTTAC--------AAACTTCCAACGAGAGCCCCTACATCATGCTCAGTGCCGACGG-GTTGGATCCT----------CTCACGGGGCGTCTGATC----TGTGTTTACCGGATGCCCGCTCCGTCCTCTCCACTGCGTGTTGGGCGTGCAGCTCTGCAGAGAA---AATCCC-ACTCATGTGCTCAGGGAGCGT-GGGAAAGCCTTGGA----AAACTTCTCCTGAAAAGTGAACAC i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10994087 1133 - 12073884 -AGCCGGCGCTGCCGGCCAC----------TTTCTTTCTAATGTGCAGTAAACATTTGCTACAAGAGAGCC-AATAACC-AAG----------TCCACAAAATAGAA-ATAGTTTCAAATTC-TGTA---TTTTAAAAAA------TCT--ATTTT-AAAATGGATTATTTTATAATCCATCCAATTGTGGAATGCCGATG-AACTGTATGAAAATTATGACATATTCTGTAATCCTATGTCTCTAAAACATCTGATTTGTT------AAAGAGAAAATCCATAATTG--------GTTTTTGAGCTGTTAAAAAAAACTCAAGGCACTATGTGTGCCAATTATAGCTAACAGTTGAGTGGGTTCCCATC-ATGGCTGCTGTGTGGCCTCA-----------------------------CACAGAGCACAGGCTA-CAGACAGTTCACAGCTTTGCTGAGGGGTGATATGCTAGAT-------GGATGA---GTCTTAT---CTGCCCC-CGAGGCAGGGCCAACAG----GCAGTGTGGAGAGGGGGTCACACACATGTGCCCAGCGATCA--CGCTCAGGAGG-------------C-CAGGCC-TATTCTGCTCTG-----------------------------TGCATGGCCCACTGAGACATGGGA----GCTATTTGTCACT-----------------GGACCTGAGGGCG--CTGCCCCCTTC-CACTTTCCCATCTCATTCCTGA--AGGGTCT-GACTG--TCCTCCAGGAGGGAAAAG-GATCTGGCGTGAAAACTGCCTTTTGC-AAG-TTCAAGGCAGAAGCAATAAATCCCTGGAGGATAGTCTAGCCTCTCTTCCTGCTTGTAATTTTCCTTTCACTTTGAATT--CCTCTAATTGACAGGGC--------AGGCAGGGGAGACCT-GGCTG---GTGGG-GACAGGTTACT--------------------ACCCAG---CTGGGCCCTGGATTA--------------------------------------------------------------------------------------------------------------------------------GGCCC----------TAAG-----------------------------------AGCCT---------------------GGGTCAGGCAGG-------GCAGAGC--T---------------------------------------------------------CCCTCTCTCTG-CCTAGGTCCC---------TTCACCCACATCTACA--CACCCT-----CTCCTTTCCTTGTTTGGCCAAGAACAAA-ATGTGTGTGGACTCA-----GGCTTTCACCCC---TTTCATTCAGAAGAGGCCCGAGAACTTCCACTGAAAATTGGCCTTTAC--------AAATTTCCAATTACAGAGCC-GAATCCTCATCAATTCTTCAGGCGTTAG---CT----------CTCACCAGCGCTTTGA--------CATTCACTGGGCGCCTGC----------------------GGGACTGC--------------------TCC--CCCAGACTCTTGGGGAGTCT-GCAGAGCCTGGGGAGTAGAAAGTTTCCCCTCGAGGTTAACAC i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56229513 1433 + 122678785 -ATCGGGT-TCATCTGATTCGTGAGCAAGTATTCTTTCTACCAAG----AAATATTTCCTAAAGGAAAGCC-AACAGCT-GAGATCCTTTACAACCACTAAATAAAATGGAATTTCAAACTTCTGTC---TTAAAAAAAGAAAATTTCTGTGTTCT-GAGATGGATTATTTCATAATCCATTCAACTATGAAATTCTGATATAATTGCTTGGAAATTTTTGCTTATCTTGTAATCCTATGACTCAGTAATATCTGGTTGGTTG--------GGGAAAGGTCACCA--G--------GCTGGTGAG----------AA--CCGAAGCCAGATTGATGCCAATTCTGGTGAGTGACTGGATGTGC--------ACATCCATGG---TTCCATGCCATGCTGTGTA---GCA-----------CACGTGTCCTGGGGCATTTGGAAGCCCCCCTCCCTACTGATATATTAATCACACTCACATCATCAATGTTC--ATCACACACACTCGTCAGTACCATCAGAAGGACCAAGGAGAAATTC--GAAGATCGTTACAAATTTATGCCCAGATGCCAAGGGGCCAAGAGA-------------TGCAAGTGACATTTTACTGTGGTGAGCTCTGGAGAGTGAAGAGTTCACCATGTATTCCTTACCAAAAAGCAGGAT---GCTGGAT-TCACTTG--AGTAAATTCAAAATGACTGAAATAAAGTCTGCGTTGTTC-CACTTTTTTGTTGGCAGTTTGTAAAGAGTCTGGATGG--TTTTCCAGGAGA-TTACAAGATCTGGCACTGAGCCCACCTTTGATAAGG-CCCAGAGCAAGATCAGTAAACCCTAAGAAGGGTTTCTTACCTCTTTTTAAGCTTGCAG-TTTCCTTTTACTCTAAATTCTCATAAAATTGACA--GTTCCAGCAGAAGAGGTGGAGACAC-AACCATCAGCAGGCAGCTGTTTACTCTATGGTCTGGGGCTCACGGACCAAGGACAAGGGTGCAGGGCTGAAGAATCCTCCTTGTTTGGAGC----------------------------------AAGGACCATGTCCCG-------------------TGGTGACCTGGA-TAAGTGGCTGTGGGTGTGTGGGGATGACT-----------TGAGAACTAAATCCTCAGTGCCGGT-------AGAGCAAAGTCTGCT----------------GAGGGACCCTCAGGA-----------------------------------------------------TGCTTCTATTATTGTCTCATTTGTCTCT--GCCCTTCATCCCAGAAGAGCACTGCCCATCACGTGCACACAAGCTCAGGGCTCATTGTGTTATCTGACTTGGTCCAA--ATCTTTGTGGATTCA-----AGCTTTCACCAG---TTTCTTTCAAGAGAGGCCCCAAAATCTCCATTAAAAGTCAACTTGTAC--------AGGCTTCAAATTACAAAGCTTAATTTGTGACACATTTTTATGA-GGTAGCTCCT----------CTTACCCGGTGTTTGAGCAGCAAACATTTACTGAGTTCCTGCTACGTCCTCTCCTGCAGGAGCAGCGCATGC-TCTCTGTAAGGAAGGGAAACATGACTC-TGCTCTCCTGGAGTGTAAGGAGAGTCATGGG----AAATTTCCCTTGAAAC-TAAACTT i canFam3.chr1 I 1441 C 0 s dasNov3.JH569188 656044 1514 + 760995 acccaggt-cattctgattcatgcattagcattctctctTCCATGCAACAAAT-TTTCATAAAAGAAAGCCAAATAACT-GAAAACCTTTGCATCCATTAAAT----------GCCA------TAGA---GTTTCAAAGT------TCTGCATTTTAAAAACATAACATTTCAT------------TATGAAATTATGATGTAACTGCATAAACATTATAACATATCCTGTAAGGCTATAGTTTTGTAATAT-TGGTTTGTTGGAAATAAAAAGAAAGTACATAACTGCTTGCTATGTTGTTGAA----------AAGCTCAAGAAGGGATGTGCGCTTATTATCTTGACCACCCTTGCAGGTTTA-ACTTACAGCTGCTA---TGTTTCACTGTGTAGAACATATGTAATACGATGGTTTGCTTGATAGAGAATG---TGAAATTCTGCTCTTC----ATAAATCGATCACTCTAA-------AAGGGGTAAGTCCCAT---CTTCACAGCAAGATAGAGTGACTAGA---GCAAATTGGGGAGATTGCC-------------CAGAGATTATGGGGCCAGACCAATACATTAGAGGCC-CAAGTCACGTTTTACCCTGGTGTGCTCTGGTGAGTTA--AGTTTATCATGTGTTTCCTACTGAGAAACAGGAT---GCTACTTTTCATTCGAAGTCAATGTCAAAATGACCTGAAAAAA--GACTATTATTA-CATTCTTATGTCTGTAGCCCATACAGAGTCG-GAATGACTCATCAAGAAGAGTTAAATTATCTAGCATTAAAACTGTCTTTGGT-AAATTTCAGGGCAAGAACAACAAATCCTGTGGTTATATACTAACATTTTTTCCTGCCCGTAA-GTTTGGTTCAGCCTAAATTCCAACATAACTGACAAAATTACAGCAAAGTAAGGGGAGACCTAAGCCATCAGAAAACAATTGTTACTT--------------------CCTCAGCGCCACAGTTAGATGACAGTAGTG------------------------AGCAAAGAAGAACAATGCCAGATCCTTGGACACTTTGTCTAGAAAAGGagcgttcaccaccaggg-cctgacatg--tgccagctaatatttatgaatgaattaaCAACATTGTAAGGGCTAAATGCTTAAGAGATGTCTCCTCAGAGAGAAGCTCTGTTAAAAGAGTAAAACACAAATAAAGCAGCATTAAGGAAAACAGGGGGTT---GGAAATAACTGCCAGCATATTAAACAAGTCTTTTTTTTTTTTTAAATGTCTCATAGTT-TCTTTGCCCTTTAGGACCAAAGAGCTTCTCCTATAACTGACATCTCAACAGTGTTTATTTTTAGTTGTTCAGCTTT--------GTTT----------------GGCTTTGACCTAAATCTTCATTCAAGAAAGACCTTAGGACTTTCACTAAAAGCTGGCTTTTACATTTTTTAAAATGTGAAATTACAGATTCTAGCTAATCATATATTTTTAGGA-GGTGAATTTT----------CTTACCAGATGtttaatcaacaaacatttcctgggtacctgctatatgcactctgctaatttccaggaatagagtt--gaacaaaagacaaatgtggtttatactcttatggaggataaggacagcca--gg----aaagcttaattgaaaatacaa--- i dasNov3.JH569188 C 0 C 0 a score=179059.000000 s hg38.chr6_KB021644v2_alt 173993 26 + 185823 ACGCAGCATTCGGAGACGA--C----TATTAA s panTro5.chr6 173637414 26 + 175400573 ACGCAGCATTCGGAGACGA--C----TATTAA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171862951 26 + 173848474 ACGCAGCATTCGGAGACGA--C----TATTAA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11546077 26 - 12463322 ACGCAGCATTCGGAGACGA--C----TATTAA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156379100 26 + 157873769 ACGCAGCATTAGGAGACGA--C----TATTAA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170406525 26 + 172585720 GCACAGCGTTAGGGGACGA--C----TGTTAA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169149806 26 - 170955103 GCACAGCGTTAGGGGACGA--C----TGTTAA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8436165 26 + 10161646 GCACAGCGTTAGGGGACGA--C----TGTTAA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1466309 26 + 3144229 GCACAGCATTAGGGGACGA--C----TGTTAA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96751564 26 + 98384682 GCACAGCGTTAGGGGACGA--C----TGCTAA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8315076 26 - 10857215 GCACAGCGTTAGGGGACGA--C----TGTTAA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15674027 26 - 23502949 GCACAGCATTAGGAGATGA--C----TGTTAA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169961682 25 + 171630274 -CGCAGCCTCAGGAGATGC--C----TGTTAA i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1359841 25 - 2905041 -CACAGCCTCGGGAGGTGC--G----CGTGAG i saiBol1.JH378287 C 0 C 0 s aotNan1.NW_018494782v1 1571467 25 - 1813869 -CGCAGCCTCAGGAGATGC--C----TGTTAA i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10995220 28 - 12073884 CCACACCGTGGGGAGACACATC----TACTGG i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56230946 20 + 122678785 TTACACCATCAAGAGACGG--C---------- i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 657558 29 + 760995 atCCAG-ACCAAAAGACAG--CCTGCTATTAA i dasNov3.JH569188 C 0 C 0 e cebCap1.NW_016107695v1 1325121 22 - 2164891 I a score=2548589.000000 s hg38.chr6_KB021644v2_alt 174019 266 + 185823 TAAATA-----------AAACGCGTGAACTGCTTTTCATGTGTGAGGTGACTG-----TT----GTCACTCATG-TTGGTCCTCTGCAGTGCAGTC-C-TAGCCTGTT----TTGACCCCATTCCTATAAA-CACCGCAGGAAGGCACTACTTAGCTTGGTATTTGTGCCACTTAAACATGTTCCCGTTAAGCACATATTTGTGGTAATTGGGCATAATCCACTTAGTCTTGGTTTCTCATGAAAAATGTGTGGAAGGATTCTGTGCCCCAAGCCTTGATGGGTCAT----------------------------------------------------------------------------GCACAGT s panTro5.chr6 173637440 257 + 175400573 TAAATA-----------AAATGCGTGAGCTGCTTTTCATGTGTGAGGTGACTG-----TT----GTCACTCATG-TTGGTCCTCTGCA-----------TAGCCTGTT----TTGACCCCATTCCTATAAA-CACCGCAGGAAGGCACTACTTAGCTTGGTATTTGTGCCACTTAAACATGTTCCCGTTAAGCACATATTTGTGGTAATTGGGCATAATCCACTTAGTCTAGGTTTCTCATGAAAAATGTGTGGAAGGATTCTGTGCCCCAAGCCTTGATGGGTCAT----------------------------------------------------------------------------GCACAGT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171862977 342 + 173848474 TAAATA-----------AAACGCGTGAGCTGCTTTTCATGTGTGAGGTGACTG-----TT----GTCACTCATG-TTGGTCCTCTGCAGTGCAGTC-C-TAGCCTGTT----TTGACCCCATTCCTATAAA-CACCGCAGGAAGGCACTACTTAGCTTGGTATTTGTGCCACTTAAACATGTTCCCGTTAAGCACATATTTGTGGTAATTGGGCATAATCCACTTAGTCTAGGTTTCTCATGAAAAATGTGTGGAAGCATTCTGTGCCCCAAGCTTTGATGGGTCATGCACAGTGGAATCGGAACTGTATCCAATGCACCCACGTGCACAGTGGAATCGGAACTGTATCCAATGCACCCACACGCACAGT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11546103 266 - 12463322 TAAACA-----------AAACGCGTGAACTGCTTTTCATGTGTGAGGTGACTG-----TT----GTCACTCATG-TTGGTCCTCTGCAGTGCAGTC-C-TAGCCTGTT----TTGACCCCATTCCTATAAA-CAACGCAGGAAGGCACTACTTAGCTTGGTATTTGTGCCACTTAAACATGTTCCCGTTAAGCACATATTTGTGGTAATTGGGCATAATCCACTTAGTCTAGGTTTCTCATGAAAAATGTGTGGAAGGATTCTGTGCCCCAAACCTTGATGGGTCAT----------------------------------------------------------------------------GCACAGT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156379126 266 + 157873769 TAAATA-----------AAATGCGTGAACTGCTTTTCGTGTGTGAGTTGACTG-----CT----CTCACTCATG-TTGGTCCTCTGCAGTGCAGTC-G-TAGCCTGTT----TTGACCCCATTCCTATAAA-CACCGCAGGAAGGCACTACTTAGCTTGGTATTTGTGCCACTTAAACATGTTCCTGTGAAGCACATATTTGTGGTAATTGGGCATAATCCACTTAGTCTAGGTTTCTCATGAAAAATGTGTGGAAGAATTCTGTGCCTCAAGCCTTCATGGGTCAT----------------------------------------------------------------------------GTGCAGT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170406551 265 + 172585720 TAAATA-----------AAATGCGTCAACTGCTTTTCATGTGTGCGTTGACTA-----CT----GTCACCAAGG-TTGGTCCTCTGCAGTGCAGTC-C-CAGCCTGTT----TTGACCCCATTCCTATAAA-CACCGCAGGAAGGCACTACTTAGCTTGGTATTTGTGTCACTTAAACATGTTCCCGTTAAGCACATATTTGTGGTAATTAGGTATAATCCCCTTAGTCTAGGTTTCTCAT-AAAAATGTGTGGAAGAATTCTGTGCCTCAAGCGTTGATGGGTCAG----------------------------------------------------------------------------ACACAGT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169149832 266 - 170955103 TAAATA-----------AAATGCGTCAACTGCTTTTCATGTGTGCGTTGACTG-----CT----CTCACCAAGG-TTGGTCCTCTGCAGTGCAGTC-C-CAGCCTGTT----TTGACCCCATTCCTATAAA-CACCGCAGGAAGGCACTACTTAGCTTGGTATTTGTGTCACTTAAACATGTTCCCGTTAAGCACATATTTGTGGTAATTAGGTATAATCCCCTTAGTCTAGGTTTCTCATGAAAAATGTGTGGAAGAATTCTGTGCCTCAAGCGTTGATGGGTCAG----------------------------------------------------------------------------ACACAGT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8436191 266 + 10161646 TAAATA-----------AAATGCGTCAACTGCTTTTCATGTGTGCGTTGACTG-----CT----GTCACCAAGG-TTGGTCCTCCGCAGTGCAGTC-C-CAGCCTGTT----TTGACCCCATTCCTATAAA-CACCGCAGGAAGGCACTACTTAGCTTGGTATTTGTGTCACTTAAACATGTTCCCGTTAAGCACATGTTTGTGGTAATTAGGTATAATCCCCTTAGTCTAGGTTTCTCATGAAAAATGTGTGGAAGAATTCTGTGCCTCAAGCGTTGATGGGTCAG----------------------------------------------------------------------------ACACAGT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1466335 266 + 3144229 TAAATA-----------AAATGCGTCAACTGCTTTTCATGTGTGCATTGACTG-----CT----GTCACCAAGG-TTGGTCCTCTGCAGTGCAGTC-C-CAGCCTGTT----TTGACCCCATTCCTATAAA-CACCGCAGGAAGGCACTACTTAGCTTCGTATTTGTGTCACTTAAACATGTTCCCGTTAAGCACATATTTGTGGTAATTGGGTATAATCCCCTTAGTATAGGTTTCTCATGAAAAATGTGTGGAAGAATTCTGTGCCTCAAGCGTTGATGGGTCAG----------------------------------------------------------------------------ACACAGT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96751590 266 + 98384682 TAAATA-----------AAATGCATGAACTGCCTTTCATGTGTGCATTGACTG-----CT----GTCACCAAGG-TTGGTCCTCTGCAGTGCAGTC-C-CAGCCTGTT----TTGACCCCATTCCTATAAA-CAATGCAGGAAGGCACTACTTAGCTTGGTATTTGTGCCACTTAAACATGTTCCCCTTAAGCACATATTTGTGGTAATTGGGTATAATCCATTTAGTCTAGGTTTCTCATGAAAAATGTGTGGAAGAATTCTGTGCCTCAAGCGTTGATGGGTCAG----------------------------------------------------------------------------GCACAGT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8315102 266 - 10857215 TAAATA-----------AAATGCGTCAACTGCTTTTCATGTGTGCGTTGACGG-----CT----GTCACCAAGG-TTGGTCCTCTGCAGTGCAGTC-C-CAGCCTGTT----TTGACCCCATTCCTATAAA-CACCGCAGGAAGGCACTACTTAGCTTGGTATTTGTGTCACTTAAACATGTTCCCGTTAAGCACATATTTGTGGTAATTGGGCACAATCCACTTAGTCTAGGTTTCTCATGAAAAATGTGTGGAAGAATTCTGTGCCTCAAGTGTTGATGGGTCAG----------------------------------------------------------------------------ACACAGT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15674053 265 - 23502949 TAAATA-----------AAAAGCGTGAACTGCTTTTCATGTGTGCATTGACTG-----CT----GTCACCAAGG-TTGGTCCTCTGCAGTGCAGTC-C-CAGCCTGTT----TTGACCCCATTCCTATAAA-CACCACAGGAAGGCACTACTTAGCTTGGTATTTGTGCCACTTAAACATGTTCCCGTTAAGCACATATTTGTGGTAATTGGGCATAATCCACTTAGTCTAGG-TTCTCATGAAAATTGTGTGGAAGAATTCTGTGCCTCAAGCATTGATGGGTCAG----------------------------------------------------------------------------GCACAGT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169961707 240 + 171630274 TAGATG-----------AAACGCGTGAACTACTTCTCATGCGCTACCTGAC-G-----CT----GTCACTCACG-CTGGTCGTCGGCTATTCAGTC-C-TAG---------------------CCTGTGAA-CACCACAGGAAGGCACTACTCAGCTTGGTGTTTGTGCCTCTTAAACATGTTCCCATTAAGCACATATTTGTGGTAATTGGGCGTAATCCACTTAGTCGA--------ATGAAAAATGCATGGAAGGATTCTGTGCCTCAAGCCTTGATGCGTCAT----------------------------------------------------------------------------GCACGGT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1359866 266 - 2905041 TACAGG-----------AAAGGCGTGAACTACTCCTCACGTGCGGCTTGACGG-----CT----GTCACTCCTG-CGGGTCCTCTGCTATCCAGTC-C-CAGCGTGTT----TCGACCCCGTTCCTGCAAA-CACCACAGGCAGGCACTGCTTAGCTTGGTATTTGTGTCTCTTAAACGTGTTCCCATTAGGCGCATATTTGTGGTAATTGGGTGTCATCCACTTAGTCCAGGTTCCTCACGAAAAATGCGTGGAAGGATTCTGTGCCTCGAGCCTTGATGCGTCCT----------------------------------------------------------------------------GCACGGT i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1325143 265 - 2164891 TAAAAG-----------AAACGCGTGAACTGCTTCTCATGTGCTGCCTGATGG-----CT----GTCACTCAGG-CTGGTCCTCTG-TATTCAGTC-C-TAGCCTGTT----TCGACCCCGTTCCTGTAAA-CACCACAGGAAGGCACTACTTAGCGTGGCATTTGTGCCTCTTAAACGTGTTCCCATTAAGCGCATATTTGTGGTAATTGGGCATAATCCACTTAGTCTAGGTTCCTCATGAAAAATGCGTGGAAGGATTCTGTGCCTCAAGCCTTGATGCGTCAT----------------------------------------------------------------------------GCACGGT i cebCap1.NW_016107695v1 I 22 C 0 s aotNan1.NW_018494782v1 1571492 266 - 1813869 TAGACG-----------AAACGCGTGAACTAGTTCTCATGTGCTTCCTGACGG-----CT----GTCACTCATG-CTGGTCCTCTGCGATTCAGTC-G-TAGCCTGTT----TCGACTCCGTTCCTGTAAA-CACCACAGGAAGGCAGTACTTAGCTTGGTATTTGTGCCTCTTAAACATGTTCCCATTAAGCGCATATTTGTGGTAATTGGGCGTAATCCACTTAGTCTAGGTTCCTCATGAAAAATGCGTGGAAGGATTCTGTGCCTCAAGCCTTGATGCGTCGT----------------------------------------------------------------------------GCACGGT i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10995248 269 - 12073884 TCAGTACGTCCACCGGTCACTGCGTCCACGGCTGTTCACCAGTTAGTGAGCTG-----CTGCTGGTTGCTCAGG-CTGGTCATCTTTGGTGCTGCC-CTTGGCCTATA----TCAACCCTGTTAAAGGAAG-TGTCAGAGGAAAGTACCACTTAAA--------TGTGCCATTGAGACATTTCCCACTAAAGCGCA--CTGGTGATAACTGGGTGCACCCCACCCAGTCTGTGTTTCTCGTGAATGACCTGCACACGG-TTCTGTGACTTTGGGTTTGGGGGGTC------------------------------------------------------------------------------GCACCGG i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56230966 239 + 122678785 ----------------------------CTGCTATGCATAAATGTGTTGTCTATTCTTCT----GTTACTCACA-TTGGGGATCTTGGATGCATTCTC-TGACATAGG----TTGATCCCATTAAAATAAG-CAATGGAGGTA-GTACTACTTACTTTTGTATTTTTG-CATTTAAATATTTTCCCAGTAAAAATATATTTGTAGTAATCGAGTATAATCCAC-TAATCTAGTTTC-------------TATAGTAGGTTTCGGTAACTCAGGATTTGACTTATTCT----------------------------------------------------------------------------AGAAAAT i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 657587 246 + 760995 ----------------TAAATGCATAAACTGTCATTAAT-----------TTA-----TT----GTTAATGAGGATTGGTGTTCTTTGATGCATTC-C----CTTATGAAGATAGAGCCCATTAAAATAAATTAATAGAGGGA-GTACTAC-CACCATGGTATTTTTCCCATTTCAACATTTTCCCATTAAAACCTTATTTG-GATAACAGGGTAGAATTGACTTGGTCTAGATATCC----AAAAATTTGTGGAAGGGTTCTGTGACTCAAGATTTCATTGATCAT----------------------------------------------------------------------------GTGCGAT i dasNov3.JH569188 C 0 C 0 a score=146870.000000 s hg38.chr6_KB021644v2_alt 174285 17 + 185823 GGAATCGGAACTGTATC s panTro5.chr6 173637697 17 + 175400573 GGAATCGGAACTGTATC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171863319 17 + 173848474 GGAATCGGAACTGTATC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11546369 17 - 12463322 GGAATCAGAACTGTATC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156379392 17 + 157873769 GGAATCAGAACTGTATC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170406816 16 + 172585720 -GAATCAGAACTGTGTC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169150098 16 - 170955103 -GAATCAGAACTGTGTC i macFas5.chr4 C 0 C 0 s cerAty1.NW_012002071v1 1466601 16 + 3144229 -GAATCAGAACTGTGTC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96751856 16 + 98384682 -AAATCAGAACTGTGTC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8315368 16 - 10857215 -GAATCAGAACTGTGTC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15674318 16 - 23502949 -GAATCAGAACTGTGTC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169961947 17 + 171630274 GGAATCGGAGCTGCATT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1360132 17 - 2905041 GGGATCAGAGCGGCATG i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1325408 17 - 2164891 GCAATCAGAGCTGCATC i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1571758 17 - 1813869 GGAATCAGAGCTGCATC i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10995517 17 - 12073884 TGGATAAGACCCATGTC i otoGar3.GL873575 C 0 I 1085 s canFam3.chr1 56231205 17 + 122678785 ATAATGAGAATTATATC i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 657833 17 + 760995 GTAATAACAATTGCATT i dasNov3.JH569188 C 0 C 0 e macNem1.NW_012011000v1 8436457 0 + 10161646 C a score=23880.000000 s hg38.chr6_KB021644v2_alt 174302 2 + 185823 CA s panTro5.chr6 173637714 2 + 175400573 CA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171863336 2 + 173848474 CA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11546386 2 - 12463322 CA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156379409 2 + 157873769 CA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170406832 2 + 172585720 CA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169150114 2 - 170955103 CA i macFas5.chr4 C 0 C 0 s cerAty1.NW_012002071v1 1466617 2 + 3144229 CA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96751872 2 + 98384682 TA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8315384 2 - 10857215 CA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15674334 2 - 23502949 CA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169961964 2 + 171630274 CA i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1360149 2 - 2905041 CA i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1325425 2 - 2164891 CA i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1571775 2 - 1813869 CA i aotNan1.NW_018494782v1 C 0 C 0 s canFam3.chr1 56231222 2 + 122678785 CA i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 657850 2 + 760995 CA i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10995534 1085 - 12073884 I e macNem1.NW_012011000v1 8436457 0 + 10161646 C a score=18266.000000 s hg38.chr6_KB021644v2_alt 174304 3 + 185823 --ATG s panTro5.chr6 173637716 3 + 175400573 --ATG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171863338 3 + 173848474 --ATG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11546388 3 - 12463322 --ATG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156379411 3 + 157873769 --ATG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170406834 3 + 172585720 --ATG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169150116 3 - 170955103 --ATG i macFas5.chr4 C 0 C 0 s cerAty1.NW_012002071v1 1466619 3 + 3144229 --ATG i cerAty1.NW_012002071v1 C 0 I 675 s chlSab2.chr13 96751874 3 + 98384682 --GTG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8315386 3 - 10857215 --ATG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15674336 3 - 23502949 --ATG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169961966 3 + 171630274 --TTG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1360151 3 - 2905041 --ATG i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1325427 3 - 2164891 --ATG i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1571777 3 - 1813869 --ATG i aotNan1.NW_018494782v1 C 0 C 0 s dasNov3.JH569188 657852 3 + 760995 AAA-- i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10995534 1085 - 12073884 I e canFam3.chr1 56231224 0 + 122678785 C e macNem1.NW_012011000v1 8436457 0 + 10161646 C a score=19755.000000 s hg38.chr6_KB021644v2_alt 174307 3 + 185823 CAC s panTro5.chr6 173637719 3 + 175400573 CAC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171863341 3 + 173848474 CAC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11546391 3 - 12463322 CAC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156379414 3 + 157873769 CAC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170406837 3 + 172585720 CAC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169150119 3 - 170955103 CAC i macFas5.chr4 C 0 C 0 s chlSab2.chr13 96751877 3 + 98384682 CAC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8315389 3 - 10857215 CAC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15674339 3 - 23502949 CAC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169961969 3 + 171630274 CCC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1360154 3 - 2905041 CCC i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1325430 3 - 2164891 CCC i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1571780 3 - 1813869 CCC i aotNan1.NW_018494782v1 C 0 C 0 s dasNov3.JH569188 657855 3 + 760995 TAC i dasNov3.JH569188 C 0 I 3558 e otoGar3.GL873575 10995534 1085 - 12073884 I e canFam3.chr1 56231224 0 + 122678785 C e cerAty1.NW_012002071v1 1466622 675 + 3144229 I e macNem1.NW_012011000v1 8436457 0 + 10161646 C a score=9100.000000 s hg38.chr6_KB021644v2_alt 174310 1 + 185823 C s panTro5.chr6 173637722 1 + 175400573 C i panTro5.chr6 C 0 C 0 s panPan2.chr6 171863344 1 + 173848474 C i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11546394 1 - 12463322 C i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156379417 1 + 157873769 C i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170406840 1 + 172585720 C i rheMac8.chr4 C 0 I 206 s macFas5.chr4 169150122 1 - 170955103 C i macFas5.chr4 C 0 C 0 s chlSab2.chr13 96751880 1 + 98384682 C i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8315392 1 - 10857215 C i manLeu1.NW_012106474v1 C 0 I 611 s colAng1.NW_012114488v1 15674342 1 - 23502949 C i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169961972 1 + 171630274 C i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1360157 1 - 2905041 C i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1325433 1 - 2164891 C i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1571783 1 - 1813869 C i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10995534 1085 - 12073884 I e dasNov3.JH569188 657858 3558 + 760995 I e canFam3.chr1 56231224 0 + 122678785 C e cerAty1.NW_012002071v1 1466622 675 + 3144229 I e macNem1.NW_012011000v1 8436457 0 + 10161646 C a score=7238.000000 s hg38.chr6_KB021644v2_alt 174311 3 + 185823 CAC s panTro5.chr6 173637723 3 + 175400573 CAC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171863345 3 + 173848474 CAC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11546395 3 - 12463322 CAC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156379418 3 + 157873769 CAC i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169150123 2 - 170955103 -AC i macFas5.chr4 C 0 I 1 s chlSab2.chr13 96751881 3 + 98384682 CAC i chlSab2.chr13 C 0 I 367 s colAng1.NW_012114488v1 15674343 3 - 23502949 CAC i colAng1.NW_012114488v1 C 0 I 41 e otoGar3.GL873575 10995534 1085 - 12073884 I e saiBol1.JH378287 1360158 0 - 2905041 C e aotNan1.NW_018494782v1 1571784 0 - 1813869 C e cebCap1.NW_016107695v1 1325434 0 - 2164891 C e calJac3.chr4 169961973 0 + 171630274 C e dasNov3.JH569188 657858 3558 + 760995 I e canFam3.chr1 56231224 0 + 122678785 C e cerAty1.NW_012002071v1 1466622 675 + 3144229 I e manLeu1.NW_012106474v1 8315393 611 - 10857215 I e macNem1.NW_012011000v1 8436457 0 + 10161646 C e rheMac8.chr4 170406841 206 + 172585720 I a score=35483.000000 s hg38.chr6_KB021644v2_alt 174314 40 + 185823 ---------ACGCACAGTGGA-------ATCGGAACTGTATCCAATGCACCCACGT s panTro5.chr6 173637726 40 + 175400573 ---------GTGCACAGTGGA-------ATCGGAACTGTATCCAATGCACCCACAC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171863348 40 + 173848474 ---------ACGCACAGTGGA-------ATCGGAACTGTATCCAATGCACCCACAC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11546398 40 - 12463322 ---------GTGCACAGTGGA-------ATCAGAACTGTATCCAATGCACCCACAT i gorGor5.CYUI01015032v1 C 0 I 1863 s nomLeu3.chr3 156379421 40 + 157873769 ---------ATGCACAGTGGA-------ATCAGAACTGTATCCAATGCACCCACAT i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169150126 56 - 170955103 CTGCTTAATACCCACCTATGACATGTCCATCTCAATGGTGTCCAATGCACCACCCT i macFas5.chr4 I 1 C 0 e otoGar3.GL873575 10995534 1085 - 12073884 I e saiBol1.JH378287 1360158 0 - 2905041 C e aotNan1.NW_018494782v1 1571784 0 - 1813869 C e cebCap1.NW_016107695v1 1325434 0 - 2164891 C e calJac3.chr4 169961973 0 + 171630274 C e dasNov3.JH569188 657858 3558 + 760995 I e colAng1.NW_012114488v1 15674346 41 - 23502949 I e canFam3.chr1 56231224 0 + 122678785 C e chlSab2.chr13 96751884 367 + 98384682 I e cerAty1.NW_012002071v1 1466622 675 + 3144229 I e manLeu1.NW_012106474v1 8315393 611 - 10857215 I e macNem1.NW_012011000v1 8436457 0 + 10161646 C e rheMac8.chr4 170406841 206 + 172585720 I a score=43293.000000 s hg38.chr6_KB021644v2_alt 174354 52 + 185823 GCACAGTG---------GA-------ATCGGAACTGTATCCAATGCACCCA-------------CGTGCACAGTGGAATCG--- s panTro5.chr6 173637766 52 + 175400573 GCACAGTG---------GA-------ATCGGAACTGTATCCAATGCACCCA-------------CGTGCACAGTGGAATCG--- i panTro5.chr6 C 0 I 152 s panPan2.chr6 171863388 52 + 173848474 GCACAGTG---------GA-------ATCGGAACTGTATCCAATGCACCCA-------------CAGGCACAGTGGAATCA--- i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11548301 52 - 12463322 GCACAGTG---------GA-------ATCAGAACTGTATCCAATGCACCCA-------------CATGCACAGTGGAATCA--- i gorGor5.CYUI01015032v1 I 1863 C 0 s nomLeu3.chr3 156379461 52 + 157873769 GCACAGTG---------GA-------ATCAGAACTGTATCCAATGCACCCA-------------CATGCACAGTGGAATCA--- i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169150182 84 - 170955103 GCTTAATACCCACCTATGACATGTTCATCTCAATGGTATCCAATGCACCCACCCTTTTAATACCCATCTATGACATGTTCATCT i macFas5.chr4 C 0 C 0 e otoGar3.GL873575 10995534 1085 - 12073884 I e saiBol1.JH378287 1360158 0 - 2905041 C e aotNan1.NW_018494782v1 1571784 0 - 1813869 C e cebCap1.NW_016107695v1 1325434 0 - 2164891 C e calJac3.chr4 169961973 0 + 171630274 C e dasNov3.JH569188 657858 3558 + 760995 I e colAng1.NW_012114488v1 15674346 41 - 23502949 I e canFam3.chr1 56231224 0 + 122678785 C e chlSab2.chr13 96751884 367 + 98384682 I e cerAty1.NW_012002071v1 1466622 675 + 3144229 I e manLeu1.NW_012106474v1 8315393 611 - 10857215 I e macNem1.NW_012011000v1 8436457 0 + 10161646 C e rheMac8.chr4 170406841 206 + 172585720 I a score=24580.000000 s hg38.chr6_KB021644v2_alt 174406 20 + 185823 GAACTGTATCCAATGCACCC s panTro5.chr6 173637970 20 + 175400573 GAACTGTATCCAATGCACCC i panTro5.chr6 I 152 C 0 s panPan2.chr6 171863440 20 + 173848474 GAACTGTATCCAATGCACCC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11548353 20 - 12463322 GAACTGTATCCAATGCACCC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156379513 20 + 157873769 GAACTGTATCCAATGCACCC i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169150266 20 - 170955103 CAATGGTGTCCAATGCATCC i macFas5.chr4 C 0 I 31 e otoGar3.GL873575 10995534 1085 - 12073884 I e saiBol1.JH378287 1360158 0 - 2905041 C e aotNan1.NW_018494782v1 1571784 0 - 1813869 C e cebCap1.NW_016107695v1 1325434 0 - 2164891 C e calJac3.chr4 169961973 0 + 171630274 C e dasNov3.JH569188 657858 3558 + 760995 I e colAng1.NW_012114488v1 15674346 41 - 23502949 I e canFam3.chr1 56231224 0 + 122678785 C e chlSab2.chr13 96751884 367 + 98384682 I e cerAty1.NW_012002071v1 1466622 675 + 3144229 I e manLeu1.NW_012106474v1 8315393 611 - 10857215 I e macNem1.NW_012011000v1 8436457 0 + 10161646 C e rheMac8.chr4 170406841 206 + 172585720 I a score=8678.000000 s hg38.chr6_KB021644v2_alt 174426 12 + 185823 AGAGGCACAGTG s panTro5.chr6 173637990 12 + 175400573 ACAGGCACAGTG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171863460 12 + 173848474 ACAGGCACAGTG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11548373 12 - 12463322 ACACGCACAGTA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156379533 12 + 157873769 ACATGCACAGTG i nomLeu3.chr3 C 0 C 0 e otoGar3.GL873575 10995534 1085 - 12073884 I e saiBol1.JH378287 1360158 0 - 2905041 C e aotNan1.NW_018494782v1 1571784 0 - 1813869 C e cebCap1.NW_016107695v1 1325434 0 - 2164891 C e calJac3.chr4 169961973 0 + 171630274 C e dasNov3.JH569188 657858 3558 + 760995 I e colAng1.NW_012114488v1 15674346 41 - 23502949 I e canFam3.chr1 56231224 0 + 122678785 C e chlSab2.chr13 96751884 367 + 98384682 I e cerAty1.NW_012002071v1 1466622 675 + 3144229 I e manLeu1.NW_012106474v1 8315393 611 - 10857215 I e macNem1.NW_012011000v1 8436457 0 + 10161646 C e rheMac8.chr4 170406841 206 + 172585720 I e macFas5.chr4 169150286 31 - 170955103 I a score=2865.000000 s hg38.chr6_KB021644v2_alt 174438 2 + 185823 GA s panTro5.chr6 173638002 2 + 175400573 GA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171863472 2 + 173848474 GA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11548385 2 - 12463322 GA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156379545 2 + 157873769 GA i nomLeu3.chr3 C 0 C 0 s macNem1.NW_012011000v1 8436457 2 + 10161646 GA i macNem1.NW_012011000v1 C 0 C 0 e otoGar3.GL873575 10995534 1085 - 12073884 I e saiBol1.JH378287 1360158 0 - 2905041 C e aotNan1.NW_018494782v1 1571784 0 - 1813869 C e cebCap1.NW_016107695v1 1325434 0 - 2164891 C e calJac3.chr4 169961973 0 + 171630274 C e dasNov3.JH569188 657858 3558 + 760995 I e colAng1.NW_012114488v1 15674346 41 - 23502949 I e canFam3.chr1 56231224 0 + 122678785 C e chlSab2.chr13 96751884 367 + 98384682 I e cerAty1.NW_012002071v1 1466622 675 + 3144229 I e manLeu1.NW_012106474v1 8315393 611 - 10857215 I e rheMac8.chr4 170406841 206 + 172585720 I e macFas5.chr4 169150286 31 - 170955103 I a score=13116.000000 s hg38.chr6_KB021644v2_alt 174440 9 + 185823 ATCAGAACT s panTro5.chr6 173638004 9 + 175400573 ATCAGAACT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171863474 9 + 173848474 ATCAGAACT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11548387 9 - 12463322 ATCAGAACT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156379547 9 + 157873769 ATCAGAACT i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169150317 9 - 170955103 ATCTCAATG i macFas5.chr4 I 31 C 0 s macNem1.NW_012011000v1 8436459 9 + 10161646 ATCAGAACT i macNem1.NW_012011000v1 C 0 C 0 e otoGar3.GL873575 10995534 1085 - 12073884 I e saiBol1.JH378287 1360158 0 - 2905041 C e aotNan1.NW_018494782v1 1571784 0 - 1813869 C e cebCap1.NW_016107695v1 1325434 0 - 2164891 C e calJac3.chr4 169961973 0 + 171630274 C e dasNov3.JH569188 657858 3558 + 760995 I e colAng1.NW_012114488v1 15674346 41 - 23502949 I e canFam3.chr1 56231224 0 + 122678785 C e chlSab2.chr13 96751884 367 + 98384682 I e cerAty1.NW_012002071v1 1466622 675 + 3144229 I e manLeu1.NW_012106474v1 8315393 611 - 10857215 I e rheMac8.chr4 170406841 206 + 172585720 I a score=5348.000000 s hg38.chr6_KB021644v2_alt 174449 2 + 185823 GT s panTro5.chr6 173638013 2 + 175400573 GT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171863483 2 + 173848474 GT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11548396 2 - 12463322 GT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156379556 2 + 157873769 GT i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169150326 2 - 170955103 GT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8436468 2 + 10161646 GT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1467297 2 + 3144229 GT i cerAty1.NW_012002071v1 I 675 C 0 e otoGar3.GL873575 10995534 1085 - 12073884 I e saiBol1.JH378287 1360158 0 - 2905041 C e aotNan1.NW_018494782v1 1571784 0 - 1813869 C e cebCap1.NW_016107695v1 1325434 0 - 2164891 C e calJac3.chr4 169961973 0 + 171630274 C e dasNov3.JH569188 657858 3558 + 760995 I e colAng1.NW_012114488v1 15674346 41 - 23502949 I e canFam3.chr1 56231224 0 + 122678785 C e chlSab2.chr13 96751884 367 + 98384682 I e manLeu1.NW_012106474v1 8315393 611 - 10857215 I e rheMac8.chr4 170406841 206 + 172585720 I a score=1577.000000 s hg38.chr6_KB021644v2_alt 174451 1 + 185823 A s panTro5.chr6 173638015 1 + 175400573 A i panTro5.chr6 C 0 C 0 s panPan2.chr6 171863485 1 + 173848474 A i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11548398 1 - 12463322 A i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156379558 1 + 157873769 A i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169150328 1 - 170955103 G i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8436470 1 + 10161646 G i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1467299 1 + 3144229 A i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96752251 1 + 98384682 A i chlSab2.chr13 I 367 C 0 e otoGar3.GL873575 10995534 1085 - 12073884 I e saiBol1.JH378287 1360158 0 - 2905041 C e aotNan1.NW_018494782v1 1571784 0 - 1813869 C e cebCap1.NW_016107695v1 1325434 0 - 2164891 C e calJac3.chr4 169961973 0 + 171630274 C e dasNov3.JH569188 657858 3558 + 760995 I e colAng1.NW_012114488v1 15674346 41 - 23502949 I e canFam3.chr1 56231224 0 + 122678785 C e manLeu1.NW_012106474v1 8315393 611 - 10857215 I e rheMac8.chr4 170406841 206 + 172585720 I a score=58300.000000 s hg38.chr6_KB021644v2_alt 174452 10 + 185823 TCCAATGCA-C s panTro5.chr6 173638016 10 + 175400573 TCCAATGCA-C i panTro5.chr6 C 0 C 0 s panPan2.chr6 171863486 10 + 173848474 TCCAATGCA-C i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11548399 10 - 12463322 TCCAATGCA-C i gorGor5.CYUI01015032v1 C 0 I 500 s nomLeu3.chr3 156379559 10 + 157873769 TCCAATGCA-C i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170407047 10 + 172585720 TCCAATGCA-C i rheMac8.chr4 I 206 C 0 s macFas5.chr4 169150329 10 - 170955103 TCCAATGCA-C i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8436471 10 + 10161646 TCCAATGCA-C i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1467300 11 + 3144229 TCCAATGCACC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96752252 10 + 98384682 TCCAATGCA-C i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8316004 10 - 10857215 TCCAATGCA-C i manLeu1.NW_012106474v1 I 611 C 0 s colAng1.NW_012114488v1 15674387 10 - 23502949 TCCAATGCA-C i colAng1.NW_012114488v1 I 41 C 0 e otoGar3.GL873575 10995534 1085 - 12073884 I e saiBol1.JH378287 1360158 0 - 2905041 C e aotNan1.NW_018494782v1 1571784 0 - 1813869 C e cebCap1.NW_016107695v1 1325434 0 - 2164891 C e calJac3.chr4 169961973 0 + 171630274 C e dasNov3.JH569188 657858 3558 + 760995 I e canFam3.chr1 56231224 0 + 122678785 C a score=-2711.000000 s hg38.chr6_KB021644v2_alt 174462 1 + 185823 -G s panTro5.chr6 173638026 1 + 175400573 -C i panTro5.chr6 C 0 C 0 s panPan2.chr6 171863496 1 + 173848474 -C i panPan2.chr6 C 0 C 0 s nomLeu3.chr3 156379569 1 + 157873769 -T i nomLeu3.chr3 C 0 I 608 s chlSab2.chr13 96752262 1 + 98384682 -T i chlSab2.chr13 C 0 C 0 s canFam3.chr1 56231224 1 + 122678785 G- i canFam3.chr1 C 0 C 0 e otoGar3.GL873575 10995534 1085 - 12073884 I e saiBol1.JH378287 1360158 0 - 2905041 C e aotNan1.NW_018494782v1 1571784 0 - 1813869 C e cebCap1.NW_016107695v1 1325434 0 - 2164891 C e calJac3.chr4 169961973 0 + 171630274 C e dasNov3.JH569188 657858 3558 + 760995 I e colAng1.NW_012114488v1 15674397 0 - 23502949 C e cerAty1.NW_012002071v1 1467311 0 + 3144229 C e manLeu1.NW_012106474v1 8316014 0 - 10857215 C e macNem1.NW_012011000v1 8436481 0 + 10161646 C e rheMac8.chr4 170407057 0 + 172585720 C e gorGor5.CYUI01015032v1 11548409 500 - 12463322 I e macFas5.chr4 169150339 0 - 170955103 C a score=248227.000000 s hg38.chr6_KB021644v2_alt 174463 33 + 185823 CACCCTGCTTAATACC--------------------------------------------------------------CACCTATGACATGTCCA s panTro5.chr6 173638027 33 + 175400573 CACCCTGCTTAATACC--------------------------------------------------------------CACCTATGACATGTCCA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171863497 33 + 173848474 CACCCTGCTTAATACC--------------------------------------------------------------CACCTATGACATGTCCA i panPan2.chr6 C 0 C 0 s nomLeu3.chr3 156380178 33 + 157873769 CACCCTACTTAATACC--------------------------------------------------------------CACATATGACATATCCA i nomLeu3.chr3 I 608 C 0 s rheMac8.chr4 170407057 33 + 172585720 CACCCTGCTTAATACC--------------------------------------------------------------CACCTATGGCATGTCCA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169150339 33 - 170955103 CACCCTGCTTAATACC--------------------------------------------------------------CACCTATGGCATGTCCA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8436481 33 + 10161646 CACCCTGCTTAATACC--------------------------------------------------------------CACCTATGACATGTCCA i macNem1.NW_012011000v1 C 0 I 106 s cerAty1.NW_012002071v1 1467311 95 + 3144229 CACCCTGCTTAATACCCACCTATCGACAATGGTCCATCTCAATGGTGTCCAATGGCACGCCACCCATGGTTAATATTTCACCTATGACATGTCCA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96752263 33 + 98384682 CACCCTGCTTAGTACC--------------------------------------------------------------CACCTATGACATGTCCA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8316014 33 - 10857215 CACCCTGCTTAATACC--------------------------------------------------------------CACCTATGGCATGTCCA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15674397 33 - 23502949 CACCCTGTTTAATACC--------------------------------------------------------------CACCTATGACATGTCCA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169961973 33 + 171630274 CACCCTGTTCAATACC--------------------------------------------------------------CACCTATAACATGTCCA i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1360158 33 - 2905041 CACCCTGTTCAGTACC--------------------------------------------------------------CACCTATGACATGTCCA i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1325434 33 - 2164891 CACCCTGTTCAGTACC--------------------------------------------------------------CACCTATAACATGTCCG i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1571784 33 - 1813869 CACCCTGTTCAATACC--------------------------------------------------------------CACCTATAACACGTCCA i aotNan1.NW_018494782v1 C 0 C 0 s canFam3.chr1 56231225 7 + 122678785 CACCCTG---------------------------------------------------------------------------------------- i canFam3.chr1 C 0 C 0 e otoGar3.GL873575 10995534 1085 - 12073884 I e dasNov3.JH569188 657858 3558 + 760995 I e gorGor5.CYUI01015032v1 11548409 500 - 12463322 I a score=152349.000000 s hg38.chr6_KB021644v2_alt 174496 17 + 185823 TCTCAATGGTGTCCAAT s panTro5.chr6 173638060 17 + 175400573 TCTCAATGGTGTCCAAT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171863530 17 + 173848474 TCTCAATGGTGTCCAAT i panPan2.chr6 C 0 C 0 s nomLeu3.chr3 156380211 17 + 157873769 TCTCAATGGTGTCCAAT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170407090 17 + 172585720 TCTCAATGGTGTCCAAT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169150372 17 - 170955103 TCTCAATGGTGTCCAAT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8436620 17 + 10161646 TCTCAATGGTGTCCAAT i macNem1.NW_012011000v1 I 106 C 0 s cerAty1.NW_012002071v1 1467406 17 + 3144229 TCTCAACGGTGTCCAAT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96752296 17 + 98384682 TCTCAATGGTGTCCAAT i chlSab2.chr13 C 0 I 164 s manLeu1.NW_012106474v1 8316047 17 - 10857215 TCTCAATGGTGTCCAAT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15674430 17 - 23502949 TCTCAATGGTGTCCAAT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169962006 17 + 171630274 TCTCAACGGCGTCCAGT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1360191 17 - 2905041 TCTCAGTGGCGTCCAGT i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1325467 17 - 2164891 TCTCAACGGCGTCCAGT i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1571817 17 - 1813869 TCTCAATGGCGTCCAGT i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10995534 1085 - 12073884 I e dasNov3.JH569188 657858 3558 + 760995 I e canFam3.chr1 56231232 0 + 122678785 C e gorGor5.CYUI01015032v1 11548409 500 - 12463322 I a score=322995.000000 s hg38.chr6_KB021644v2_alt 174513 39 + 185823 GCACCCACCCTGTTTAATACCCACCTATGCTGTGCCCAT s panTro5.chr6 173638077 39 + 175400573 GCACCCACCCTGTTTAATACCCACCTATGCTGTGCCCAT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171863547 39 + 173848474 GCACCCACCCTGTTTAATACCCACCTATGCTGTGCCCAT i panPan2.chr6 C 0 C 0 s nomLeu3.chr3 156380228 39 + 157873769 GCACCCACCCTGTTTAATACCCACCTATGCTGTGCCCAT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170407107 39 + 172585720 GCACCCACCCTGGTTAATATCCACCTATGCTGTGCCCAT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169150389 39 - 170955103 GCACCCACCCTGGTTAATATCCACCTAAGCTGTGCCCAT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8436637 39 + 10161646 GCACCCACCCTGGTTAATATCCACCTATGCTGTGCCCAT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1467423 38 + 3144229 GCACCCACCCTGGTTAATACCCACC-ATGCTGTGCCCAT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96752477 39 + 98384682 GCACCCACCCTGGTTAATACCCACCTATGCTGTGCCCAT i chlSab2.chr13 I 164 C 0 s manLeu1.NW_012106474v1 8316064 39 - 10857215 GCACCCACCCTGGTTAATATCCGCCTATGCTGTGCCCAT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15674447 39 - 23502949 GCATCCACCCTGGTTAATACCCACCTATGCTGTGCCCAT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169962023 38 + 171630274 GCCCACACCCC-TTTAATACCCACCCATGCTGTGCCCAT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1360208 39 - 2905041 GCCCCCACCCCGTTTAATACCCACCCATACTGTGCCCAT i saiBol1.JH378287 C 0 I 1 s cebCap1.NW_016107695v1 1325484 38 - 2164891 GCCCCCACCTCGTTTAACACCCACCCATGCTGTGCCGT- i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1571834 39 - 1813869 GCCCCCACCCCGTTTAATACCCACCCATGCTGTGCCCGT i aotNan1.NW_018494782v1 C 0 C 0 s canFam3.chr1 56231232 33 + 122678785 ------AACATATTGTACATCCATCTACACTGTGCATAT i canFam3.chr1 C 0 C 0 e otoGar3.GL873575 10995534 1085 - 12073884 I e dasNov3.JH569188 657858 3558 + 760995 I e gorGor5.CYUI01015032v1 11548409 500 - 12463322 I a score=8666.000000 s hg38.chr6_KB021644v2_alt 174552 1 + 185823 C s panTro5.chr6 173638116 1 + 175400573 C i panTro5.chr6 C 0 C 0 s panPan2.chr6 171863586 1 + 173848474 C i panPan2.chr6 C 0 C 0 s nomLeu3.chr3 156380267 1 + 157873769 C i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170407146 1 + 172585720 C i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169150428 1 - 170955103 C i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8436676 1 + 10161646 C i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1467461 1 + 3144229 C i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96752516 1 + 98384682 C i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8316103 1 - 10857215 C i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15674486 1 - 23502949 C i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169962061 1 + 171630274 C i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1325522 1 - 2164891 C i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1571873 1 - 1813869 C i aotNan1.NW_018494782v1 C 0 C 0 s canFam3.chr1 56231265 1 + 122678785 T i canFam3.chr1 C 0 C 0 e otoGar3.GL873575 10995534 1085 - 12073884 I e saiBol1.JH378287 1360247 1 - 2905041 I e dasNov3.JH569188 657858 3558 + 760995 I e gorGor5.CYUI01015032v1 11548409 500 - 12463322 I a score=1260310.000000 s hg38.chr6_KB021644v2_alt 174553 155 + 185823 TCAATGACACATACCCGTGTC-AGAA--------------AGTAGCTGTAAAAGCATGTGTCTGGTATTTACG--GTTTGGGCTGCTTT-GCCTGCTG-TTTCTCTTACCAGAAATGACAGAACATCCTTGGCGATGGCTCCTGCA--CACTTTCCAAGTGT-GGTGTTGAAGGAGC s panTro5.chr6 173638117 155 + 175400573 TCAATGACACATACCCGTGTC-AGAA--------------AGTAGCTGTAAAAGCATGTATCTGGTATTTACG--GTTTGGGCTGTTTT-GCCTGCTA-TGTCTCTTACCAGAAATTACAGAACGTCCTTGGCGATGGCTCCTGCA--CACTTTCCAAGTGT-GGTGTTGAAGGAGC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171863587 155 + 173848474 TCAATGACACATACCCGTGTC-AGAA--------------AGTAGCTGTAAAAGCATGTATCTGGTATTTACG--GTTTGGGCTGTTTT-GCCTGCTA-TGTCTCTTACCAGAAATTACAGAACGTCCTTGGCGATGGCTCCTGCA--CACTTTCCAAGTGT-GGTGTTGAAGGAGC i panPan2.chr6 C 0 C 0 s nomLeu3.chr3 156380268 154 + 157873769 TCAATGACGCATACATGTGTC-AGAA--------------AGTAGCTGTAATAGCA-GTATCTGGTATTGACG--GTTTGGGCTGTTTT-GCCTGCTA-TTTCTCTTACCAGAAATTACAGAACGTCCTTGGCGATGGCTCCTGCA--CACTTTCCAAGTGT-GGTGTTGAAGGAGC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170407147 155 + 172585720 TCAATGACACATACATGTGTC-AGAA--------------AGTAGCTGTAATAGCATGTCTCTGGTATTTACA--GTTTGGGCTGTTTT-GCCTGCGA-TTTCTCTTACCAGAAATTACAGAACGTCCTTGGCGATGGCTCCTGCA--CACTTTCCAAGTGT-GGTGTTGAAGGAGC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169150429 155 - 170955103 TCAATGACACATACATGTGTC-AGAA--------------AGTAGCTGTAATAGCATGTCTCTGGTATTTACA--GTTTGGGCTGTTTT-GCCTGCGA-TTTCTCTTACCAGAAATTACAGAACGTCCTTGGCGATGGCTCCTGCA--CACTTTCCAAGTGT-GGTGTTGAAGGAGC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8436677 155 + 10161646 TCAATGACACATACATGTGTC-AGAA--------------AGTAGCTGTAATAGCATGTCTCTGGTATTTACA--GTTTGGGCTGTTTT-GCCTGCGA-TTTCTCTTACCAGAAATTACAGAACGTCCTTGGCGATGGCTCCTGCA--CACTTTCCAAGTGT-GGTGTTGAAGGAGC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1467462 160 + 3144229 TCAATGACACATAATGTTGTCAAGAA--------------AGTAG-TGTAATGAGGTGTCTCTGGGATTTACGGCGTTTGGGCT-TTTT-GCCTGCGATTTTCTCTTACCAGAAATTACAGAACGTCCTTGGCGATGGCTTCTGCAACCACTTTCAATGTGTGGGTGTTGAAGGAGC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96752517 155 + 98384682 TCAATGGCACATACACGTGTC-AGAA--------------AGTAGCTGTAATAGCATGTCTCTGGTATTTACG--GTTTCGGCTGTTTT-GCCTGCGA-TTTCTCTTATCAGAAATTACAGAACGTCCTTGGCGATGGCTCCTGCA--CACTTTCCAAGTGT-GCTGTTGAAGGAGC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8316104 155 - 10857215 TCAATGACACATACATGTGTC-AGAA--------------AGTAGCTGTAATAGCATGTCTCTGGTATTTACA--GTTTGGGCTGTTTT-GCCTGCGA-TTTCTCTCACCAGAAATTACAGAACGTCCTTGGCGATGGCTCCTGCA--CACTTTCCAAGTGT-GGTGTTGAAGGAGC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15674487 155 - 23502949 TCAATGACACATACATGTGTC-AGAA--------------AGTAGCTGTAATAGCATGTCTCTGGTATTTACG--GTTTGGGCTGTTTT-GCCTGCTA-TTTCTCTTACCAGAAATTACAGAACGTCCTTGGCGATGGCTCCTGCA--CATTTTCCAAGTGT-GGTGTTGAAGGAGC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169962062 154 + 171630274 TTGATGACGCATCCATGTGTC-AGAA--------------AGTAGCCGTAATCACATTTATCTGGTATTTATG--GTTTGGGCTGCTTTGGCCGGCGA-TT--TCTTACCAGAAATTACAGAACGTCCTTGGCACTGGCTCCTGCA--CGCTTTCCAAGTGT-GGTGTTTAGGGAGC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1360248 154 - 2905041 TCGGTGACGCATCCGTGTGTC-AGAA--------------AGTAGCGGTAATCACATTTATCTGGTATTTGTG--GTTTGCGCTGCTTTGGCCTGAGA-TT--TCTTACCAGAAATTACAGAAGGTCCTTGGCTCTGGCTCCTGCA--CGCTTTCCAAGTGC-GGTGTTGAGGGAGC i saiBol1.JH378287 I 1 C 0 s cebCap1.NW_016107695v1 1325523 154 - 2164891 TCGATGACGCATCCAAGTGTC-AGAA--------------AGCAGCAGTAATCACATTTATCTGGTATTTACG--GTTTGGGCTGCTTTGGCCTGCGA-TT--TCCTACCAGAAATTACAGAACGTCCTTGGCACTGGCTCCTGCA--CGCTTTCCAAGCGT-GGTGTTTAGGGAGC i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1571874 154 - 1813869 TCGATGACGCATCCATGTGTC-AGAA--------------AGTAGCGGTAATCACATTTATCTGGTATTTATG--GTTTGGGCTGCTTTGGCCAGCGA-TT--TCTTACCAGAAATTACAGAACGTCCTTGGCACTGGCTCCTGCA--CGCTTTCCAAGTGT-GGTGTTTAGGGAGC i aotNan1.NW_018494782v1 C 0 C 0 s canFam3.chr1 56231266 168 + 122678785 TGAGTGATGCATTAATGTGTC-TGTGAACTTGGGTTCTTCAGTAACTGTAATGGCATCTCTGATGCACTCATG--GTTTTGATCATTTCAGTCTGGGT-TC--TCTTAGTAGACATTACAGAAAGTTCTTGGCTACTGTTCATGTA--TTTATTTCAAGTAT-GGTGTTTATTTACT i canFam3.chr1 C 0 C 0 e otoGar3.GL873575 10995534 1085 - 12073884 I e dasNov3.JH569188 657858 3558 + 760995 I e gorGor5.CYUI01015032v1 11548409 500 - 12463322 I a score=228517.000000 s hg38.chr6_KB021644v2_alt 174708 27 + 185823 AGCTTTTTAATCAGTTTCA-TGATGG--GG s panTro5.chr6 173638272 27 + 175400573 AGCTTTTTAATCAGTTTCA-TGATGG--GG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171863742 27 + 173848474 AGCTTTTTAATCAGTTTCA-TGATGG--GG i panPan2.chr6 C 0 C 0 s nomLeu3.chr3 156380422 27 + 157873769 AGCTTTGTAATCAGTTTCA-TGATGG--GG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170407302 27 + 172585720 AGCTTTTTAATCAGTATCG-TGACAG--AG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169150584 27 - 170955103 AGCTTTTTAATCAGTATCG-TGACAG--AG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8436832 27 + 10161646 AGCTTTTTAATCAGTATCG-TGACAG--AG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1467622 30 + 3144229 AGCTTTTTAATCAGTATCGTTGACAGACAG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96752672 27 + 98384682 ACCTTTTTAATCAGTTTCG-TGACAG--AG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8316259 27 - 10857215 AGCTTTTTAATCAGTATCA-TGACAG--AG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15674642 27 - 23502949 AGCTTTTTAATCAGTTTCA-TGACAG--AG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169962216 27 + 171630274 AGTTTTTTAATCAGTTTCA-TGGCGG--GG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1360402 27 - 2905041 AGCTGTTTAATCAGTTTCA-TGACGG--GG i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1325677 27 - 2164891 AGCTTTTTAATCAGTTTCA-TGACGG--GG i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1572028 27 - 1813869 AGCTTTTTAATCAGTTTCA-TGACGG--GG i aotNan1.NW_018494782v1 C 0 C 0 s canFam3.chr1 56231434 23 + 122678785 AGCTTGTCAATTAG----A-TGACTT--GA i canFam3.chr1 C 0 I 5 s dasNov3.JH569188 661416 27 + 760995 AGCTTTTTAATCAATTTAA-TTGTGT--GA i dasNov3.JH569188 I 3558 C 0 e otoGar3.GL873575 10995534 1085 - 12073884 I e gorGor5.CYUI01015032v1 11548409 500 - 12463322 I a score=2333656.000000 s hg38.chr6_KB021644v2_alt 174735 243 + 185823 -AACCTTTTCTTCTCTGCAGTTT-TCCCTGA-AGAAGGtggctctgtgctgttctggttttc--tc----tgtctcggtc--tctatccctT------TTTGAGTTGCCTTTGCAGGTTTGTTATA-TATTTG-TGGTTATAGAAAT-G-CAAC----TTAAACCCCACTGGATGAGAAGA-CACACTTTG-TATTTGGAGTTGAAGCTCTGGGCAG-ATCC--TACT--GGGC-ATAACAGGGATGCCCTGACACTTCCT-GTGGC-TGCCATTGGT s panTro5.chr6 173638299 243 + 175400573 -AACCTTTTCTTCTCTGCAGTTT-TCCCTGA-AGAAGGtggctctgcgctgttctggttttc--tc----tgtctcggtc--tctatccctT------TTTGAGTTGCCTTTGCAGGTTTGTTATA-TATTtg-tggttatagaaat-g-caac----ttaaaccccactggatgagaaga-cacactttg-tatttggagttgaagctctgggcag-atcc--cact--gggc-ataacagggatgccctgacacttcct-gtgGC-TGCCATTGGT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171863769 243 + 173848474 -AACCTTTTCTTCTCTGCAGTTT-TCCCTGA-AGAAGGtggctctgcgctgttctggttttc--tc----tgtctcggtc--tctatccctT------TTTGAGTTGCCTTTGCAGGTTTGTTATA-TATTtg-tggttatagaaat-g-caac----ttaaaccccactggatgagaaga-cacactttg-tatttggagttgaagctctgggcag-atcc--cact--gggc-ataacagggatgccctgacacttcct-gtgGC-TGCCATTGGT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11548909 243 - 12463322 -AACCTTTTCTTCTCTGCAGTTT-TCCCTGA-AGAAGGtggctctgtgctgttctggttttc--tc----tgtctcggtc--tctatccctT------TTTGAGTTGCCTTTGCAGGTTTGTTATA-TATTtg-tggttatagaaat-g-taac----ttaaaccccactggatgagaaga-cacactttg-tatttggagttgaagctctgggcag-atcc--cact--gggc-ataacagggatgccctgacacttcct-gtgGC-TGCCATTGGT i gorGor5.CYUI01015032v1 I 500 C 0 s nomLeu3.chr3 156380449 245 + 157873769 -AACCTTTTCTTTTCTGCAGTTT-TCCCTGA-AGAAGGTGGCTCTGTGCTGTTCTGGTTTTC--TC--TTTGTCTCAGTC--TCTATCCCTT------TTTGAGTTGTCTTTGCAGGTTTGTTGTA-AATTTG-TGGTTACAGAAAT-G-CAAT----TTAAACCCCACTGGATGAGAAGA-CACACTTAA-TATTTGGCGTTGAAGCTGTGGGCAG-ATCC--CACT--GGGC-GTAACAGGGATGCCCTGACACTTCCT-GTGGC-TGCCATTGGT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170407329 245 + 172585720 -AATCTTTTCTTTTCTGCAGTTT-TCCCTGA-GGAGGGTGGCTCTGTGCTGTTCTGGTTTTCTGTC----TGTCTCGGTC--TCTATACCTT------TTTGAGTTGTCTTTGCAGGTTTGTTATA-TATTTG-TGGTTACAGAAGT-A-CAAt----ttaaaccccactggatgagaaga-cacactttg-tatttggagttgaagctctgggcag-atcc--cact--gggc-gtaacagggatgccctgacacttcct-atgGC-TGCCATTGGT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169150611 245 - 170955103 -AATCTTTTCTTTTCTGCAGTTT-TCCCTGA-GGAGGGTGGCTCTGTGCTGTTCTGGTTTTCTGTC----TGTCTCGGTC--TCTATACCTT------TTTGAGTTGTCTTTGCAGGTTTGTTATA-TATTTG-TGGTTACAGAAGT-A-CAAT----TTAAACCCCACTGGATGAGAAGA-CACACTTTG-TATTTGGAGTTGAAGCTCTGGGCAG-ATCC--CACT--GGGC-GTAACAGGGATGCCCTGACACTTCCT-ATGGC-TGCCATTGGT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8436859 245 + 10161646 -AATCTTTTCTTTTCTGCAGTTT-TCCCTGA-GGAGGGTGGCTCTGTGCTGTTCTGGTTTTCTGTC----TGTCTCGGTC--TCTATACCTT------TTTGAGTTGTCTTTGCAGGTTTGTTATA-TATTTG-TGGTTACAGAAGT-A-CAAt----ttaaaccccactggatgagaaga-cacactttg-tatttggagttgaagctctgggcag-atcc--cact--gggc-gtaacagggatgccctgacacttcct-atgGC-TGCCATTGGT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1467652 241 + 3144229 -AATCTTTTCTTTTCTCGAGTTT-TCCCTGAGGGGGGGTGGCTCTGT--TGTTCTGGTTTTCTGT-----TGTCTCGGTC--TCTAT-CCCT------TTTGAGTTGTCTTTGCAGG-TTGTTAT--TATTTGTTGGTTACAGAAGT-G-CAAT----TAAACCCCAACTGGA-GAGAAGACCACACTTTGTTATTTGGAG-TGAAGCTCTGGGCAGTACCC--CACT--GGGC-GTAACAGGGGTGCCCTGACACTTCCT-ATGGC-TG-CATTGGT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96752699 245 + 98384682 -AATCTTTTCTTTTCTGCAGTTT-TCCCTGA-GGAGGGTGGCTCTGTGCTGTTCTGGTTTTCCATC----TGTCTCGGTC--TCTATCCCTT------TTTGAGTTGTCTTTGCAGGTTTGTTATA-TATTTG-TGGTTACAGAAGT-G-CAAT----TTAAACCCCACTGGATGAGAAGA-CACACTTTG-TATTTGGAGTTGAAGCTCTGGGCAG-ATCC--CACT--GGGC-ATAACAGGGATGCCCTGACACTTCCT-ATGGC-TGCCATTAGT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8316286 245 - 10857215 -AATCTTTTCTTTTCTGCAGTTT-TCCCTGA-GGGGGGTGGCTCTGTGCTGTTCTGGTTTTCTGTC----TGTCTCGGTC--TCTATCCCTT------TTTGAGTTGTCTTTGCAGGTTTGTTATA-TATTTG-TGGTTACAGAAGT-G-CAAT----TTAAACCCCACTGGATGAGAAGA-CACACTTTG-TATTTGGAGTTGAAGCTCTGGGCAG-ATCC--CACT--GGGC-GTAACAGGGATGCCCTGACACTTCCT-ATGGC-TGCCATTGGT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15674669 243 - 23502949 -AATCTTTTCTTTTCTGCAGTTT-TCGCTGA-GGAGGGTAGCTCTGTGCTGTTCTGGTTTTCCATC----TATCTTAGTC--TCTATCCCTT------TTTGAGTTGTCTTTGCAGGTTTGTTATA-TATTTG-TGGTTACAGAAGT-G-CAAT----TTAAACCCCACTGGATGAGAAGA-CACACTTTA-TATTTGGAGTTGAAGCTCTGGGCAG-ATCC--CACT--GTGC-CTAACAGGGATG--CTGACACTTCCT-ATGGC-TGCCATGGGT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169962243 247 + 171630274 -AATGTTTTCTTTCCTGTGGCAG-TCCCTGA-ACAGGGTAGCTCTGCGCT-GCCTGCTTGTCTGTCTCTTTGTCTTGGGC--TCCATCCCTT------TTTCGGTTCTCTTTGCAGGTTTGTCATA-TGTTTG-TGGTTATGGAAAT-G-TAAC----TTAACCCCCACTGGATGAGAAGA-TGCACGTTA-TATTTGGAGTTGGGCCTCTGGACAG-ATCC--CATT--GCGT-GCAGCT-GGATGTCCCAACTCTTCCT-GTGGC-TGCCATCAGT i calJac3.chr4 C 0 I 702 s saiBol1.JH378287 1360429 246 - 2905041 -AA--TCTTCTTTCCTGCGGTAT-TCCCTGA-AGAGGGTGGCTCTGTGCTGGCCTGGTTGTCTGTCTCTTTGTCCTGGTC--TCCACCCCTT------TTTGAGTTCTCTTTGCAGGTTTTTCGTA-TATTTG-TGGTTATAGAAAC-A-TAAC----TTAA-CCCCACTGGATGAGAAGA-CGCACCTTA-TATCTGGAGTTGGGGCTCTGGACAG-ATCC--CATT--GAGT-GCAGCTGGGATGCCCCGACTCTTCCT-GTGGC-TGCCATCAGT i saiBol1.JH378287 C 0 I 263 s cebCap1.NW_016107695v1 1325704 249 - 2164891 -AATCTTTTCTTTCCTGTGGTAT-TCCCTGA-AGAGGGTGGCTCTGTGCTGGCCTGGT----TGTCTCTTTGTCTTGGTC--TCCATCCCTT------TTTGAGTTCTCTTTGCAGGTTTTTCATG-CCTTTG-TGGTTATAGAAGT-G-TAACGTTATTAACACCCACTGGATGAGAAGA-CGCACGTTA-CATTTGGAGTTGGGGCTCTGGACAC-ATCC--CATT--GAGG-GCAACTGGGATGCCCCGACTCTTCCT-GTGGC-TGCCATCAGT i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1572055 249 - 1813869 -AATCTTTTCTTTCCTGTGGCAT-TCCCTGA-AGAGGGTGGCTCTGTGCTGGCCTGGTTGTCTGTCTCTTTGTCTTGGTC--TCCATCCCTT------TTTTAGTTCTCTTTGCAGGTTTTCCATG-TATTTG-TAGTTATAGAAAT-G-TAAC----TTAACCCCCACTGGATGAGAAGA-TGCACGTTA-TGTTTGGAGTTGGGGCTCTGGACAG-ACCC--CATT--GGGT-GCAGCTGGGATGCCCTGACTCTTCCT-GTGGC-TGCCATCAGT i aotNan1.NW_018494782v1 C 0 C 0 s canFam3.chr1 56231462 260 + 122678785 -AGTCTTTTCTTCTCCATAGTTTGGTCTTCA-AGATGGTGGTTCTGTCTTGTTTCAGTTTTCTGTACCTTTGGCTTGGTA--ACTGGTCTTTTTGGGCTTTGAATTCTCTTTGCAGATTTCTCCTC-TATTTG-TGACTATGGAGATGG-CAAT----TTAAAGCCCTTCTGAGGAGAAGA-TTCACTTTA-TGTTTACAGTTGAGGCTCTGAGCAG-ATCC--CACTCGGGTG-GCAGCATGAATGCTGTGATGTTTCCTAGAGAA-CACCATAGTT i canFam3.chr1 I 5 C 0 s dasNov3.JH569188 661443 241 + 760995 AAGTCTTTTCTCTCCTGTGCTCT-TC----A-------TGGGTCTGTGTTGCTTCAGTTTTCTGTCGCTTTGGCTTGGGCATTCTGTCTCTT------TTTTATTTCTCTTTGCAGATTTCTCCTGTTATTTG-TGGCTACAGAAAG-GACAAT----TTAAATTCTATTGGATGAGAAAA-GTCTCTT---TATTTGTACCTG---CTCAGAGCAG-ATCCTGCATT--GGGTGGTGGCATGGAGGTTGTGATATTTCTT-ATGGAGCACCATTT-- i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10995534 1085 - 12073884 I a score=-12614.000000 s hg38.chr6_KB021644v2_alt 174978 2 + 185823 --GA s panTro5.chr6 173638542 2 + 175400573 --GA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171864012 2 + 173848474 --GA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11549152 2 - 12463322 --GA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156380694 1 + 157873769 --G- i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170407574 1 + 172585720 --G- i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169150856 1 - 170955103 --G- i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8437104 1 + 10161646 --G- i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1467893 1 + 3144229 --G- i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96752944 1 + 98384682 --G- i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8316531 1 - 10857215 --G- i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15674912 1 - 23502949 --G- i colAng1.NW_012114488v1 C 0 C 0 s dasNov3.JH569188 661684 2 + 760995 TC-- i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10995534 1085 - 12073884 I e saiBol1.JH378287 1360675 263 - 2905041 I e aotNan1.NW_018494782v1 1572304 0 - 1813869 C e cebCap1.NW_016107695v1 1325953 0 - 2164891 C e calJac3.chr4 169962490 702 + 171630274 I e canFam3.chr1 56231722 0 + 122678785 C a score=455670.000000 s hg38.chr6_KB021644v2_alt 174980 49 + 185823 CACGTCCTGCCCTCCACTGGA-------TAACATCATGCTGGGGTCATGGTTCTCA s panTro5.chr6 173638544 49 + 175400573 CACGTCCTGCCCTCCACTGGA-------TAACATCATGCTGGGGTCATGGTTCTCA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171864014 49 + 173848474 CACGTCCTGCCCTCCACTGGA-------TAACATCATGCTGGGGTCATGGTTCTCA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11549154 49 - 12463322 CACGTCCTGCCCTCCCCTGGA-------TAACATCATACTGGGGTCATGGTTCTCA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156380695 48 + 157873769 -ATGTCCTGCCCTCCACTGGA-------TAATATCATGCTGGGGTCATGGTTCCCA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170407575 48 + 172585720 -ACTCCCTGCCCTCCACTGGA-------TAACATCATTCTGGGGTCATGATTCCCA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169150857 48 - 170955103 -ACTCCCTGCCCTCCACTGGA-------TAACATCATTCTGGGGTCATGATTCCCA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8437105 48 + 10161646 -ACTCCCTGCCCTCCACTGGA-------TAACATCATTCTGGGGTCATGATTCCCA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1467894 55 + 3144229 -ATCTCCCGCCCTGCACTGGGGTTTTTTTAACATCATTCTGGGGTCATGATTTCCA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96752945 48 + 98384682 -ACTCCCTGCCCTCCACTGGA-------TAACATCATTCTGGGGTCATGATTCCCA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8316532 48 - 10857215 -ACTCCCTGCCCTCCACTGGA-------TAACATCATTCTGGGGTCATGATTCCCA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15674913 48 - 23502949 -ACTCTCTGCCCTCCACTGGA-------TAACATCATTCTGGGCTCATGGTTCCCA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169963192 49 + 171630274 CACTCCCCACCCTCCACTGGA-------TAACGCCAAGCTGGGGTCAGGGTTCCCT i calJac3.chr4 I 702 C 0 s saiBol1.JH378287 1360938 49 - 2905041 CACTCCCCACCCTCCACTGGA-------TAACGCCATGCTGGGGCCATGGTTCCCT i saiBol1.JH378287 I 263 C 0 s cebCap1.NW_016107695v1 1325953 49 - 2164891 CACTCCCCGCCCTCCACTGGA-------TAACGCCATGCTGGGGTCATGGTTCCCT i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1572304 49 - 1813869 CACTCCCCGCCCTCCACGGGA-------TAACGCCATGCTGGGGTCATGGTTCCCA i aotNan1.NW_018494782v1 C 0 I 105 s canFam3.chr1 56231722 39 + 122678785 ---GCTCTGTCCAGCAATGGA-------TAGTA-CACACTAGAG------TTTTCA i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 661686 47 + 760995 CCCTCTTTGCCCAGTACTGCA-------TAATATTATACCAG--TCATGGTGTCCA i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10995534 1085 - 12073884 I a score=1361837.000000 s hg38.chr6_KB021644v2_alt 175029 153 + 185823 TCCATGGTC-AAGAGACCG---TGTGCCTTA-CACACTGCTCCTCTGAGA-GCCACTGAA-GAGGG-----TGGAGGAAGGGACAGCAA-GGAGAGAGG--------------------GAA--G-----CAAAGTA-CTGGA-TCTGTTTTTATACATTGGGCT-------TC------CATTTGTGTTTGAAGTAAGGATTCTATA s panTro5.chr6 173638593 153 + 175400573 TCCATGGTC-AAGAGACCG---TGTGCCTTA-CACACTGCTCCTCTGAGA-GCCACTGAA-GAGGG-----TGGAGGAAGGGACAGCAA-GGAGAGAGG--------------------GAA--G-----CAAAGTA-CTGGA-TCTGTTTTTATACATTGGGCT-------TC------CATTTGTGTTTGAAGTAAGGATTCTATA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171864063 153 + 173848474 TCCATGGTC-AAGAGACCG---TGTGCCTTA-CACACTGCTCCTCTGAGA-GCCACTGAA-GAGGG-----TGGAGGAAGGGACAGCAA-GGAGAGAGG--------------------GAA--G-----CAAAGTA-CTGGA-TCTGTTTTTATACATTGGGCT-------TC------CATTTGTGTTTGAAGTAAGGATTCTATA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11549203 153 - 12463322 TCCATGGTC-AAGAGACCG---TGTGCCTTA-CATACTGCTCCTCTGAGA-GCCACTGAA-GAGGG-----TGGAGGAAGGGACAGCAA-GGAGAGAGG--------------------GAA--G-----CAAAGTA-CTGGA-TCTGTTTTTATACATTGGGCT-------TC------CATTTGTGTTTGAAGTAAGGATTCTATA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156380743 153 + 157873769 TCCATGGTC-AAGAGACCC---TGTGCCTTA-CACACTGCTCCTCTGAGA-GCCACTgaa-gaggg-----tggagggaggaacagcaa-ggagagagg--------------------gaa--g-----cagggTA-CTGGA-TCTGTTTTTATACATTGGGCT-------TC------CATTTGTGTTTGAAGTAAGGGTTCTAac i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170407623 153 + 172585720 TCCATGGTC-AAGAGATCC---TGTGCCTTA-CACACGGCTCCTCTGAGA-GCCACTGAA-GAGCG-----TGGAGGAAGGGACAGCAA-GGAGAGAGG--------------------GAA--A-----CAGAGTA-CTGGA-TCTGTTTTTATACATTGGGCT-------TC------CATTTGTGTTTGAAGTAAGGATTCTATA i rheMac8.chr4 C 0 I 12 s macFas5.chr4 169150905 153 - 170955103 TCCATGGTC-AAGAGATCC---TGTGCCTTA-CACACGGCTCCTCTGAGA-GCCACTGAA-GAGCG-----TGGAGGAAGGGACAGCAA-GGAGAGAGG--------------------GAA--A-----CAGAGTA-CTGGA-TCTGTTTTTATACATTGGGCT-------TC------CATTTGTGTTTGAAGTAAGGATTCTATA i macFas5.chr4 C 0 I 12 s macNem1.NW_012011000v1 8437153 153 + 10161646 TCCATGGTC-AAGAGATCC---TGTGCCTTA-CACACGGCTCCTCTGAGA-GCCACTGAA-GAGCG-----TGGAGGAAGGGACAGCAA-GGAGAGAGG--------------------GAA--A-----CAGAGTA-CTGGA-TCTGTTTTTATACATTGGGCT-------TC------CATTTGTGTTTGAAGTAAGGATTCTATA i macNem1.NW_012011000v1 C 0 I 12 s cerAty1.NW_012002071v1 1467949 161 + 3144229 TCCATGGTC-AAGAGATCCTGGTGCGCGTTAGCACACGGCTCCTCTGAGAGGCCACTGAACGGGGG-----TGGAGGAA-GGACAGCAAGGGAGAGAGG--------------------GAAGGG-----CAGAGTAGCTGGATTCTGTTTT--TACCATGGCCT-------TC------CATTTGTGTTTGAAGTAAGGCTTCTATA i cerAty1.NW_012002071v1 C 0 I 334 s chlSab2.chr13 96752993 153 + 98384682 TCCATGGTC-AAGAGATCC---TGTGCCTTA-CACACGGCTCCTCTGAGA-GCCACTGAA-GAGGG-----TGGAGGAAGGGACAGCAA-GGAGAGAGG--------------------GAA--G-----CAGAGTA-CTGGG-TCTGTTTTTATACATTGGGCT-------TC------CATTTGTGTTTGAAGTAAGGATTCCATG i chlSab2.chr13 C 0 I 12 s manLeu1.NW_012106474v1 8316580 153 - 10857215 TCCATGGTC-AAGAGATCC---TGTGCCTTA-CACATGGCTCCTCTGAGA-GCCACTGAA-GAGCG-----TGGAGGAAGGGACAGCAA-GGAGAGAGG--------------------GAA--G-----CAGAGTA-CTGGA-TCTGTTTTTATACATTGGGCT-------TC------CATTTGTGTTTGAAGTAAGGATTCTATA i manLeu1.NW_012106474v1 C 0 I 12 s colAng1.NW_012114488v1 15674961 153 - 23502949 TCCATGGTC-AAGAGACCC---TGTGCCTTA-CACATGGCTCCTCTGTGA-GCCACTGAA-GAGGG-----TGGAGGAAGGGACAGCAA-GGAGAGAGG--------------------GAA--G-----CAGAGTA-CTGGA-TCTGTTTTTATACATTGGGCT-------TC------CATTTATGTTTGAAGTAAGGATTCTATA i colAng1.NW_012114488v1 C 0 I 6 s calJac3.chr4 169963241 156 + 171630274 CTCATAGTC-AAGGGACCC---TGTACCTTG-CACACTGTCCCTCTAAAA-GCCACTGAA-GAGGG-----TGGCAGAAGAGGCAGCAA-G--GAGAGG--------------------GAA--G-----CAGAGCA-CCGG---CCATGTTTATACACAGACTGTATAAACTC------CATTAGTGTTTAGAGTAAGGATTCTATA i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1360987 151 - 2905041 TCCATAGTC-AAGGGACCC---TGTACCTTA-CACACTGTTCCTCTGAGA-GCCGCTGAA-GAGGG-----TGGCAGAAGAGACAGCAA-G--GAGACG--------------------GAA--G-----CAGAGTA-CCGGC-TCTGTGTTTATACACTGGGTG-------CC------CATTAGTGTTTCGAGTAAGGATTCTATA i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1326002 151 - 2164891 TCCATAGTC-AAGGGACCC---TGTACCTTA-CACACTGTCCCTCTGAGA-GCCACTGAA-GAGGG-----TGGCAGAAGAGACAGCAA-G--GAGAGG--------------------GAA--G-----CAGAGTA-CTGGC-TCTGTGTTTATACACTGAGCG-------TC------CATTAGTGTTTGGAGTAAGGATTCTATA i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1572458 150 - 1813869 TCCATAATC-AAGGGACCC---TGTACCTTA-CACACTGTCCCTCTGAGA-GCCACTGAA-GAGGG-----TGGCAGAAGAGACAGCAA-G--GAGAGG--------------------GAA--G-----CAGAGTA-CAGGC-TCTGTGTTTATACACTGGGCT-------CC------CATTAGTGTTTGGAGT-AGGATTCTATG i aotNan1.NW_018494782v1 I 105 C 0 s canFam3.chr1 56231761 89 + 122678785 TCAGTGATC-TATGAACAC---TCTATATCA-CACACGGTTGCT-TCAGA-ACTGCTGAA-GAGGG----------------------A-AGAGGAGGG--------------------ACA--G-----TGTCATA-CACCA-TGTGT----------------------------------------------------------- i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 661733 189 + 760995 CCCAGAGTCTAATAAGTTC---TCTGTATAA-CACATTGTCCCTTTAAGA-ATCTCTATA-AAgggacactaagaaggagggaaaatgg-ggaagaatgaacttttggccctccatccagaa--gtcagccagaata-tttta-tgtgt-tttacatattgggct-------tctacctacatttttgtttgaaataaaaattctATA i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10995534 1085 - 12073884 I a score=29270.000000 s hg38.chr6_KB021644v2_alt 175182 3 + 185823 aca s panTro5.chr6 173638746 3 + 175400573 aca i panTro5.chr6 C 0 C 0 s panPan2.chr6 171864216 3 + 173848474 aca i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11549356 3 - 12463322 aca i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156380896 3 + 157873769 aca i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170407788 3 + 172585720 aca i rheMac8.chr4 I 12 C 0 s macFas5.chr4 169151070 3 - 170955103 aca i macFas5.chr4 I 12 C 0 s macNem1.NW_012011000v1 8437318 3 + 10161646 aca i macNem1.NW_012011000v1 I 12 C 0 s cerAty1.NW_012002071v1 1468444 3 + 3144229 aca i cerAty1.NW_012002071v1 I 334 C 0 s chlSab2.chr13 96753158 3 + 98384682 aca i chlSab2.chr13 I 12 C 0 s manLeu1.NW_012106474v1 8316745 3 - 10857215 aca i manLeu1.NW_012106474v1 I 12 C 0 s colAng1.NW_012114488v1 15675120 3 - 23502949 aca i colAng1.NW_012114488v1 I 6 C 0 s calJac3.chr4 169963397 3 + 171630274 Cca i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1361138 3 - 2905041 Cca i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1326153 3 - 2164891 Cca i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1572608 3 - 1813869 CCA i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10996619 3 - 12073884 aca i otoGar3.GL873575 I 1085 C 0 s dasNov3.JH569188 661922 3 + 760995 TCA i dasNov3.JH569188 C 0 I 138 e canFam3.chr1 56231850 0 + 122678785 C a score=64072.000000 s hg38.chr6_KB021644v2_alt 175185 6 + 185823 cacaca s panTro5.chr6 173638749 6 + 175400573 cacaca i panTro5.chr6 C 0 C 0 s panPan2.chr6 171864219 6 + 173848474 cacaca i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11549359 6 - 12463322 cacaca i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156380899 6 + 157873769 cacaca i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170407791 6 + 172585720 cgcaca i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169151073 6 - 170955103 cgcaca i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8437321 6 + 10161646 cgcaca i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1468447 6 + 3144229 cgcacg i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96753161 6 + 98384682 tgcaca i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8316748 6 - 10857215 cgcaca i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15675123 6 - 23502949 cacaca i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169963400 6 + 171630274 cccaca i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1361141 6 - 2905041 cacaca i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1326156 6 - 2164891 cacaca i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1572611 6 - 1813869 CACACA i aotNan1.NW_018494782v1 C 0 I 2125 s otoGar3.GL873575 10996622 6 - 12073884 cacacc i otoGar3.GL873575 C 0 I 1 s dasNov3.JH569188 662063 6 + 760995 Catata i dasNov3.JH569188 I 138 C 0 e canFam3.chr1 56231850 0 + 122678785 C a score=13073.000000 s hg38.chr6_KB021644v2_alt 175191 1 + 185823 c s panTro5.chr6 173638755 1 + 175400573 c i panTro5.chr6 C 0 C 0 s panPan2.chr6 171864225 1 + 173848474 c i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11549365 1 - 12463322 c i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156380905 1 + 157873769 c i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170407797 1 + 172585720 c i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169151079 1 - 170955103 c i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8437327 1 + 10161646 c i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1468453 1 + 3144229 c i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96753167 1 + 98384682 c i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8316754 1 - 10857215 c i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15675129 1 - 23502949 c i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169963406 1 + 171630274 c i calJac3.chr4 C 0 I 605 s saiBol1.JH378287 1361147 1 - 2905041 c i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1326162 1 - 2164891 c i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1574742 1 - 1813869 C i aotNan1.NW_018494782v1 I 2125 C 0 s otoGar3.GL873575 10996629 1 - 12073884 c i otoGar3.GL873575 I 1 C 0 s dasNov3.JH569188 662069 1 + 760995 t i dasNov3.JH569188 C 0 C 0 e canFam3.chr1 56231850 0 + 122678785 C a score=39508.000000 s hg38.chr6_KB021644v2_alt 175192 3 + 185823 aca s panTro5.chr6 173638756 3 + 175400573 aca i panTro5.chr6 C 0 C 0 s panPan2.chr6 171864226 3 + 173848474 aca i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11549366 3 - 12463322 aca i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156380906 3 + 157873769 aca i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170407798 3 + 172585720 aca i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169151080 3 - 170955103 aca i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8437328 3 + 10161646 aca i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1468454 3 + 3144229 aca i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96753168 3 + 98384682 aca i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8316755 3 - 10857215 aca i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15675130 3 - 23502949 aca i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169964012 3 + 171630274 aca i calJac3.chr4 I 605 C 0 s saiBol1.JH378287 1361148 3 - 2905041 aca i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1326163 3 - 2164891 aca i cebCap1.NW_016107695v1 C 0 I 2184 s aotNan1.NW_018494782v1 1574743 3 - 1813869 ACA i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10996630 3 - 12073884 aca i otoGar3.GL873575 C 0 C 0 s dasNov3.JH569188 662070 3 + 760995 aaa i dasNov3.JH569188 C 0 C 0 e canFam3.chr1 56231850 0 + 122678785 C a score=-13398.000000 s hg38.chr6_KB021644v2_alt 175195 10 + 185823 ca----------------------tacacaca s panTro5.chr6 173638759 4 + 175400573 ca----------------------------ca i panTro5.chr6 C 0 C 0 s panPan2.chr6 171864229 6 + 173848474 ca--------------------------caca i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11549369 28 - 12463322 ca----cgcacgcacacacacacacacacaca i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156380909 32 + 157873769 cacacacacacacacacacacacacacacaAA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170407801 10 + 172585720 ca----------------------tacacaAA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169151083 10 - 170955103 ca----------------------tacacaAA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8437331 10 + 10161646 ca----------------------tacacaAA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1468457 10 + 3144229 ca----------------------cacacaca i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96753171 10 + 98384682 ca----------------------tacacaAA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8316758 10 - 10857215 ca----------------------tacacaAA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15675133 10 - 23502949 ca----------------------cacacaAA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169964015 10 + 171630274 ca----------------------cagacaca i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1361151 10 - 2905041 ca----------------------ctcactca i saiBol1.JH378287 C 0 I 3627 s cebCap1.NW_016107695v1 1328350 10 - 2164891 CA----------------------GAGACACA i cebCap1.NW_016107695v1 I 2184 C 0 s aotNan1.NW_018494782v1 1574746 10 - 1813869 CA----------------------CAGACACA i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10996633 10 - 12073884 ----------------------tgggcacaca i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56231850 3 + 122678785 ---------------------------ATA-- i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 662073 9 + 760995 ---------------------cattatata-- i dasNov3.JH569188 C 0 C 0 a score=1596452.000000 s hg38.chr6_KB021644v2_alt 175205 166 + 185823 ATTATAAAATCACAGCATCAGGATAACCCAGGATGCCT--CA----------TTAACCTGTGAATAAAGAGACAGGGTCAGGCTAACAATAAAAGCCCAGATTGTACGGGAGTTGAAGACATCTTGGCCCTCTGCAAG-ATGACT-CTCTCACACAGACTTGGAAACAGTTTGAGCCAAC s panTro5.chr6 173638763 166 + 175400573 ATTATAAAATCACAGCATCAGGATAACCCAGGATGCCT--CA----------TTAACCTGTGAATAAAGAGACAGGGTCAGGCTAACAATAAAAGCCCAGATTGTACGGGAGTTTAAGACATCTTGGCCCTCTGCAAG-ATGACT-CTCTCACACAGACTTGGAAACAGTTTGAGCCAAC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171864235 166 + 173848474 ATTATAAAATCACAGCATCAGGATAACCCAGGATGCCT--CA----------TTAACCTGTGAATAAAGAGACAGGGTCAGGCTAACAATAAAAGCCCAGATTGTACGGGAGTTTAAGACATCTTGGCCCTCTGCAAG-ATGACT-CTCTCACACAGACTTGGAAACAGTTTGAGCCAAC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11549397 166 - 12463322 ATTATAAAATCACAGCATCAGGATAACCCAGGATGCCT--CA----------TTAACCTGTAAATAAAGAGACAGGGTCAGGCTAACAATAAAAGCCCAGATTGTACGGGAGTTTAAGACATCTTGGCCCTCTGCAAG-ATGACT-CTCTCACACAGACTTGGAAACAGTTTGAGCCAAC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156380941 166 + 157873769 ATTATAAAATCACAGCATCAGGATAACCCAGGATGCCT--CA----------TTAACCTGTAAATAAAGAGACAAGGTCATGCTAACAATAAAAGCCCAGATTGTACGGGAGTTTAAGACATCTTGGCCCTCTGCAAG-ATGACT-GTCTCACACAGCCTTGGAAACGGTTTGAGCCAAC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170407811 166 + 172585720 ATTATAAAATCACAGCATCAGGATAACCCAGGATGTCT--CA----------TTAACCTGCGAATAAAGAGACAGGGTTATGCTAACAATAAAAGACCAGATTGTATGGGAGTTTAAAACATCTTGGCCCTCTGCAAA-ATGACC-CTCTCACACAGGCTTGGAAAGGGTTTGAGCCAAC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169151093 166 - 170955103 ATTATAAAATCACAGCATCAGGATAACCCAGGATGTCT--CA----------TTAACCTGCGAATAAAGAGACAGGGTTATGCTAACAATAAAAGACCAGATTGTATGGGAGTTTAAAACATCTTGGCCCTCTGCAAA-ATGACC-CTCTCACACGGGCTTGGAAAGGGTTTGAGCCAAC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8437341 166 + 10161646 ATTATAAAATCACAGCATCAGGATAACCCAGGATGTCT--CA----------TTAACCTGCGAATAAAGAGACAGGGTTATGCTAACAATAAAAGACCAGATTGTATGGGAGTTTAAAACATCTTGGCCCTCTGCAAA-ATGACC-CTCTCACACGGGCTTGGAAAGGGTTTGAGCCAAC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1468467 166 + 3144229 ATTATAAAATCACAGCATCAGGATAACCCAGGATGTCT--CA----------TTAACCTGCGAATAAAGAGACAGGGTTATGCTAACAATAAAAGACCAGACTGTATGGGAATTTAATACATCTTGGCTCTCTGCAAA-ATGACC-CTCTCACACGGGCTTGGAAAGGGTTTGAGCCAAC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96753181 166 + 98384682 ATTATAAAATCACAGCATCAGGATAACCCAGGATGTCT--CA----------TTAACCTGCAAATAAAGAGACAGGGTTATGCTAACAATAAAATACCAGATTGTATGGGAGTTTAATACATCTTGGCCCTCTGCAAG-ATGACC-CTCTCACACGGGCTTGGAAAGGGTTTGAGCCAAC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8316768 166 - 10857215 ATTATAAAATCACAGCATCAGGATAACCCAGGATGTCT--CA----------TTAACCTGCGAATAAAGAGACAGGGTTATGCTAACAATAAAATACCAGATTGTATGGGAGTTTAAAACATCTTGGCCCTCTGCAAA-ATGACC-CTCTCACACGGGCTTGGAAAGGGTTTGAGCCAAC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15675143 166 - 23502949 ATTATAAAATCACAGCATCAGGATAACCCAGGATGTCT--CA----------TTAACCTGCGAATAAAGAGACAGGGTTATGCTAACAATAAAAGACCAGATTGTATGGGAGTTTAATATATCTTGGCCCTCTGCAAG-ATGACC-CTCTCACACGGGCTTGGAAAGCATTTGAGCCAAC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169964025 162 + 171630274 cTCGTAAA---ATGGCATCAGGATAACCTGAGATGCCT--CA----------TTGACCTGTGAATAAGGAGACAGCGTCATGCTAACAGTAAAAACCCGGATTGCCCGGGAGTTTAAGACATCTTGGC-CTCTGAAGG-AGAGCT-GTCTCACACAGGCTTGGAGACGGTTTGAGCCAAC i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1328360 165 - 2164891 CTCATAAAATCATGGCACCAGGATAACCCAAGATGCCT--CA----------TTAACCTGTGAATAAAGAGACAAGGTCATGCTAACAATAAAAACCCAGATTGTATGGGAGTTTAAGACATCTTGGC-CTCTGAAAG-ATAGCT-ATCTCATACAGGCTTGGAAACAGTTTGAACCAAT i cebCap1.NW_016107695v1 C 0 I 8 s aotNan1.NW_018494782v1 1574756 163 - 1813869 CTCATAAAATCATGGCATCAAGATAACCCAAGATGCCT--CA----------TTGACCTGTGAATA--GAGACAGGGTCATGCTACCAATAAAAACCCAGACTGTACGGGAGTTTAATACATCTTGGC-CTCTGAAAG-ATAGCT-GTCTCATACAGGCTTGGAAACAGTTTGAGCCAAC i aotNan1.NW_018494782v1 C 0 I 3 s otoGar3.GL873575 10996643 167 - 12073884 tgcaTGTATGCACACACTC-------TCCAAAGTGTCT--CACTGATGATGTCTAACTCTTGGTGATAGAGTCAGATTCGTGCCAATGGCAAAACTCCAGATTTTACTAGAGTTTAAGAAACCGTGGC-CTCTG--AG-GTGGCCAGTGTCATCTGCATTTGGAATCAGTGGGGACCCAC i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56231853 154 + 122678785 ATTATAAAACATTAGCATCAGAATAACACATGATGCCT--TG----------TTAACCTGTGAATG----GACAGGATCTTGTTAACAATCAAAACACCAATTTTACTGGAGTTAAGGAA---------TTTTGCAAATATGTCT-GTTTCATAGGAGCTTGGAAACAGTTTGGACCAAC i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 662082 166 + 760995 attataaaatCATGGCATCAGAATAAGCTAAGATTCTCTACA----------TGAACCTGTAGTTG--GAGATAAAGTCATGTTAAGAGTAAAAACATAGAGTTTACTGGAATTTAAAGAATTTTAGCCCCCTGCAAA-ATGTCT-GTCTAATAGGAATTTAGAAATGATTTGTATCTAC i dasNov3.JH569188 C 0 C 0 e saiBol1.JH378287 1361161 3627 - 2905041 I a score=20021.000000 s hg38.chr6_KB021644v2_alt 175371 5 + 185823 TAGCT-- s panTro5.chr6 173638929 5 + 175400573 TAGCT-- i panTro5.chr6 C 0 C 0 s panPan2.chr6 171864401 5 + 173848474 TAGCT-- i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11549563 5 - 12463322 TACCT-- i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156381107 5 + 157873769 TAGCT-- i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170407977 5 + 172585720 TAGCT-- i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169151259 5 - 170955103 TAGCT-- i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8437507 5 + 10161646 TAGCT-- i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1468633 5 + 3144229 TAGCT-- i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96753347 5 + 98384682 TAGCT-- i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8316934 5 - 10857215 TAGCT-- i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15675309 5 - 23502949 TAGCT-- i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169964187 4 + 171630274 -AGTC-- i calJac3.chr4 C 0 I 4 s aotNan1.NW_018494782v1 1574922 5 - 1813869 CAATC-- i aotNan1.NW_018494782v1 I 3 C 0 s otoGar3.GL873575 10996810 5 - 12073884 CTGCC-- i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56232007 5 + 122678785 CATCA-- i canFam3.chr1 C 0 I 12 s dasNov3.JH569188 662248 5 + 760995 --CCTTC i dasNov3.JH569188 C 0 C 0 e saiBol1.JH378287 1361161 3627 - 2905041 I e cebCap1.NW_016107695v1 1328525 8 - 2164891 I a score=3013515.000000 s hg38.chr6_KB021644v2_alt 175376 360 + 185823 ATGGAGCCATAA---------------------------------------------------------CTCC------------------------TATCTGCA----------------------------------CTGG----CACAA---------TTCCCCAGATTCCAGAGCAGAAGGCTGCCTGGCTG-GACGTGAGAG--TGGAGACCTCCCTTGCCTCCCTCATCTCTCTGGGTCAGGCACTATCAGAGGAAA-CCAAGGCTGTA-CACT----------TGTGCCTGG-----ATGGCCTCTCAAG-TGTTGGTGCCATTGGAGAAGCAGAAGCACACATTTTACAGAGTTTGGAGGAACAGGGACTACAGAGCCCCCGTA--TTGAGCTTAGAACTAAATTGATATTTATCAAAAGGCTTCCCTT-----AGGGGCTGGA---GTAC--------ATTTT--------AAAATCCCTTTTTTCTATGCAGTTTAAAATATAACGCAGTCCCTTAAATGCCCTC s panTro5.chr6 173638934 360 + 175400573 ATGGAGCCATAA---------------------------------------------------------CTCC------------------------TATCTGCA----------------------------------CTGG----CACAA---------TTCCCCAGATTCCAGAGCAGAAGGCTGCCTGGCTG-GACATGAGAG--TGGAGACCTCCCTTGCCTCCCTCATCTCTCTGGGTCAGGCGCTATCAGAGGAAA-CCAAGGCTGTA-CACT----------TGTGCCCGG-----ATGGCCTCTCAAG-TGTTGGTGCCATTGGAGAAGCAGAAGCACACATTTTACAGAGTTTGGAGGAACAGGGACTACAGAGCCCCCGTA--TTGAGCTTAGAACTAAATTGGTATTTATCAAAAGGCTTCCCTT-----AGGGGTTGGA---GTAC--------ATTTT--------AAAATCCTTTTTTTCTATGCAGTTTAAAATATAACCCAGTCCCTTAAATGCCCTC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171864406 360 + 173848474 ATGGAGCCATAA---------------------------------------------------------CTCC------------------------TATCTGCA----------------------------------CTGG----CACAA---------TTCCCCAGATTCCAGAGCAGAAGGCTGCCTGGCTG-GACGTGAGAG--TGGAGACCTCCCTTGCCTCCCTCATCTCTCTGGGTCAGGCGCTATCAGAGGAAA-CCAAGGCTGTA-CACT----------TGTGCCCGG-----ATGGCCTCTCAAG-TGTTGGTGCCATTGGAGAAGCAGAAGCACACATTTTACAGAGTTTGGAGGAACAGGGACTACAGAGCCCCCGTA--TTGAGCTTAGAACTAAATTGGTATTTATCAAAAGGCTTCCCTT-----AGGGGTTGGA---GTAC--------ATTTT--------AAAATCCTTTTTTTCTATGCAGTTTAAAATATAACCCAGTCCCTTAAATGCCCTC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11549568 359 - 12463322 ATGGAGCCATAA---------------------------------------------------------CTCC------------------------TATCTGCA----------------------------------CTGG----CACAA---------TTCCCCAGATTCCAGAGCATAAGGCTGCCTGGCTG-GACGTGAGAG--TGGAGACCTCCCTTGCCTCCCTCATCTCTCTGGGTCAGACATTATCAGAGGAAA-CCAAGGCTGTA-CACT----------TGTGCCCGG-----ATGGCCTCTCAAG-TGTTGGTGCCATTGGAGAAGCAGAAGCACACATTTTACAGAGTTTGGAGGAACAGGGACTACAGAGCCCCCGTA--TTGAGCTTAGAACTAAATTGATATTTATCAAAAGGCTTCCCTT-----A-GGGTTGGA---GTAC--------ATTTT--------AAAATCCCTTTTTTCTATGCAGTTTAAAATATAACCCAGTCCCTTAAATGCCCTC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156381112 346 + 157873769 ATGGAGCCATAA---------------------------------------------------------CTCC------------------------TATCTGCA-----------------------------------TGG----CACAA---------TTCCCCAGATTCCAGAGCAGAAGGCTGCCTGGCTG-GACATCAGAG--TGGAGACCTCCCTTGCCTCCCTCGTCTCTCTGGGTCAGGCACTATCAGAGGAAA-CCAAGGCTGTA-CACT----------TGTGCCCGG-----ATGGCCTCTCAAG-TGTTGGTGCCATTGGAGAAGCAGAAGCACACATTTTACAGAGTTTGGAGGTGCAGGGACTACAGAGCCCCCGTA--TTGAGCTTAGAACTAAATTGATATTTATCGAAAGGCTTCCGTT-----AGGGGTTGGA---GTAC--------ATTTT--------AAAATCCCTTTTTTCTATGCAGTTTAAAATATAACCCATTTT------------- i nomLeu3.chr3 C 0 I 4 s rheMac8.chr4 170407982 358 + 172585720 ATGGAGCCATAA---------------------------------------------------------CTCC------------------------TATCTGCA-----------------------------------CGG----CACAG---------TTCCCCAGATTCCAGAGGAGAAGGCTGACTGGCTG-GACATCAGAG--TGGAGACCTCCCTTGCCTCCCTCATCTCTCTGGGTCAGGCACCATCAGAGGAAA-CCAAGGCTGTG-CAGT----------TGTGCCTGG-----ATGGCCTCTCAAA-TGTTGGTGCCATTGGAGAAGCAGAAGCACACATTTTGCAGCGTTTGAA-GAGCAGGGACTACAGAGCCCCTGTA--TTGAGCTTAGAACTAATTTGATATTTATCAAAAGGCTTCGCTT-----AGGGGTTGGA---GCAC--------ATTTT--------AAAATCCTTTTACTCTTTGCAGTTTAAAATAAAACCCAGTCCCTTAAATGCCCTC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169151264 358 - 170955103 ATGGAGCCATAA---------------------------------------------------------CTCC------------------------TATCTGCA-----------------------------------CGG----CACAG---------TTCCCCAGATTCCAGAGGAGAAGGCTGACTGGCTG-GACATCAGAG--TGGAGACCTCCCTTGCCTCCCTCATCTCTCTGGGTCAGGCACCATCAGAGGAAA-CCAAGGCTGTG-CAGT----------TGTGCCTGG-----ATGGCCTCTCAAA-TGTTGGTGCCATTGGAGAAGCAGAAGCACACATTTTGCAGCGTTTGAA-GAGCAGGGACTACAGAGCCCCTGTA--TTGAGCTTAGAACTAATTTGATATTTATCAAAAGGCTTCGCTT-----AGGGGTTGGA---GCAC--------ATTTT--------AAAATCCTTTTACTCTTTGCAGTTTAAAATATAACCCAGTCCCTTAAATGCCCTC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8437512 358 + 10161646 ATGGAGCCATAA---------------------------------------------------------CTCC------------------------TATCTGCA-----------------------------------CGG----CACAG---------TTCCCCAGATTCCAGAGGAGAAGGCTGACTGGCTG-GACATCAGAG--TGGAGACCTCCCTTGCCTCCCTCATCTCTCTGGGTCAGGCACCATCAGAGGAAA-CCAAGGCTGTG-CAGT----------TGTGCCTGG-----ATGGCCTCTCAAA-TGTTGGTGCCACTGGAGAAGCAGAAGCACACATTTTGCAGCTTTTGAA-GAGCAGGGACTACAGAGCCCCTGTA--TTGAGCTTAGAACTAATTTGATATTTATCAAAAGGCTTCGCTT-----AGGGGTTGGA---GCAC--------ATTTT--------AAAATCCTTTTACTCTTTGCAGTTTAAAATATAACCCAGTCCCTTAAATGCCCTC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1468638 354 + 3144229 ATGGAGCCATAA---------------------------------------------------------CTCC------------------------TATCCGCA-----------------------------------CGG----CACAG---------TTTCCCAGATTCCA---GAGAAGGCTGACTGGCTG-GACATCAGAG--TGGAGACCTCCCTTGCCTCCCTCATCTCTCTGGGTCAGGCACCATCAGAGGAAA-TCATGGCTGTG-CAGT----------TGTGCCTGG-----ATGGCCTCTCAAA-TGTTGGTGCCACTGGAGAAGCAGAAGCACACATTTTGCAGCGTTTGGA-GAGCAGGGACTACAGAGCCCCTGTA--TTGAGCTTAGAACTAATTTGATATTTATCAAAAGGCTTCCCTT-----ACGGGTTGGA---GCAC--------ATTTT---------AAATCCTTTTATTCTTTGCATTTTAAAATATAACCCAGTCCCTTAAATGCCCTC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96753352 358 + 98384682 ATGGAGCCATAA---------------------------------------------------------CTCC------------------------TATCCGCA-----------------------------------CGG----CACAG---------TTCCCCAGATTCCAGAGAAGAAGGCTGACTGGCTG-GACATCAGAG--TGGAGACCTCCCTTGCCTCCCTCATCTCTCTGGGTCGGGCACCATCAGAGGAAA-CCAAGGCTGTG-CAGT----------TGTGCCTGG-----ATGGCCTCTCAAA-TGTTGGTGCCACCGGAGAAGCAGAAGCACACATTTTGCAGCGTTTGAA-GAGCAGGGACTACAGAGCCCCTGTA--GTGAGCTTAGAACTAATTTGATATTTATCAAAAGGCTTCCCTT-----AGGGGTTGGA---GCAC--------ATTTT--------AAAATCCTTTTATTCTTTGCAGTTTAAAATATAACCCAGTCCCTTAAATGCCCTT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8316939 358 - 10857215 ATGGAGCCATAA---------------------------------------------------------CTCC------------------------TATCCGCA-----------------------------------TGG----CACAG---------TTCCTCAGATTCCAGAGGAGAAGGCTGACTGGCTG-GACATCAGAG--TGGAGACCTCCCTTGCCTCCCTCATCTCTCTGGGCCAGGCACCATCAGAGGAAA-CCAAGGCTGTG-CAGT----------TGTGCCTGG-----ATGGCCTCTCAAA-TGTTGGTGCCATTGGAGAAGCAGAAGCACACATTTTGCAGCGTTTGAA-GAGCAGGGACTACAGAGCCCCTGTA--TTGAGCTTAGAACTAATTTGATATTTATCAAAAGGCTTCCCTT-----AGGGGTTGGA---GCAC--------ATTTT--------AAAATCCTTTTACTCTTTGCAGTTTAAAATATAACCCAGTCCCTTAAATGCCCTC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15675314 358 - 23502949 ATGGAGCCATAA---------------------------------------------------------CTCC------------------------TATCCTCA-----------------------------------TGG----CACAG---------TCCCCCAGATTCCAGAGCAGAAGGCTGACTGGCTG-GACATCAGAG--TGGAGATCTCCCTTGCCTCCCTCATCTCTCTGGGTCAGGCACCATCAGAGGAAA-CCAAGGCTGTG-CAGT----------TGTGCCTGG-----ATGGTCTCTCAAA-TGTTGATGCCATTGGAGAAGCAGAAGCACACATTCTACAGCGTTTGGA-GAGCAGGGACTACAGAGCCCCTGTA--TTGAGCTTAGAACTAATTTGATATTTATCAAAAGGCTTCCCTT-----AGGGGTTGAA---GCAC--------ATTTT--------AAAATTCTTTTATTCTTTGCAGTTTAAAATATAACCCAGTCCCTTAAATACCCTC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169964195 358 + 171630274 ATGAAGCCATAA---------------------------------------------------------CTCC------------------------TGTCTGCA----------------------------------------------A---------TTCCCCAGGGTCCAGAGAAGGAGGCTGCCGGGCTG-GACAGCACAA--TGGAGACCTCCC-TGCCTCCCTCATCTCTCTGGGTCAGGCACCATCAGAGGAAGCCCAGGGCTGTG-CCCT----------TGCGCCT-G-----ATGG-CCCTCACG-TGTTGGTGCAACTGGAGAGGCAGAAGCACACATGTTACAGAGTCTGGAGGAGTGGGGACTGCAGAGTCCCCTTA--CTGAGCTTAGAACCAATTTGATATTTATGAAAAGGCTTCCATT-----AGAGGTTGAA---GCACATTTAAAAATTTT--------AAAATCCCTTTTATCCAAGCTGTTTAAAATATAACCCAGTCCCTTGAATAGCCTC i calJac3.chr4 I 4 C 0 s cebCap1.NW_016107695v1 1328533 351 - 2164891 ATGAAGCCACAA---------------------------------------------------------CTCC------------------------TGTCTGCA----------------------------------------------A---------TTCCCCAGGGCCCAGAGCAGGAGGCTGCCGGGCTG-GACAGCACAA--TGGAGACATTCC-TGCCTCCCTCGTCTCTCTGGGTCAGACACCATCAGAGGAAGCCCAGGGCTGCA-CACT----------TGCGCCT-G-----ATGGCCCCTCAAG-TGTTGGTGCACCTGGAGAGGCAGAAGCACACATTTTACAGAGTCTGGAGGAGTAGGGACTACAGAGCCCCCTTA--CTGAGCTTAGAACTAATTTGATATTTATCAAAAGGCTTCCCTT-----AGAGGTGGGA---GCAC--------ATTTT--------AAAATCCCTTTTTTCCAAGCTGTTTAAAGCATAACCCAGTCCCTTAAATAGCCTC i cebCap1.NW_016107695v1 I 8 C 0 s aotNan1.NW_018494782v1 1574927 351 - 1813869 ATGAAGCCATAA---------------------------------------------------------CTCC------------------------TGTCTGCA----------------------------------------------A---------TTCCCCAGGGTCCAGAGCAGGAGGCTGCTGGGCTG-GACAGCACAG--TGGAGGCCTCCC-TGCCTCCCTCATCTCTCTGGGTCAGGAACCATCGGAAGAAGCCCAGGGCTGTG-AACT----------TGCGCCT-G-----ATGGCCCCCCAAG-TGTTGGTGCAACTGGAGAGGCAGAAGCACACATTTTACAGAGTCTGGAGGAGTAGGGACTACAGAGCCCCCTAA--CTGAGCTTAGAACTAATTTGCTATTTATCAAAAGGCTTCCCTT-----AGAGATTGGA---GCAC--------ACTTT--------AAAATCCCTTTTTTCCAAGCTGTTTAAAATATAACCCAGTCCCTTAAATAGCCTC i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10996815 361 - 12073884 GTGAAGCTGCTG---------------------------------------------------------CTCC-------------------------ATCTGTA------------------------------------AG----CAG-G---------GCCTCCAGGCCCTGGAGCGGGGCGCT-------CT-GATGTCAGAG--CAGAG-CCACCTTGGCCACCCCCA---------GTCGATCTCTGTCAGAGGGACCCCAACGCTGTG-CACTGTACACTGTGTGTGCCCG--------GGACTTTGGAA-TGAGAGTGGGGTTGGTGACACACGACCCCAGGCCCCACGTGGTCTGGGCAAGCCAGGAACACGGAGCCACTCCAGGTGCAGCTTGCAACTGACTTGATCTTCATCTCAGAACTTTGCTTCACGGAGGGCTTAGA---GCAC--------ATTTTTAT-GAGAAAAATTCCTCTGTGGTATTTTGTTTAAAATGTAATTCAATGGTCTTAACAGCCTC i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56232024 422 + 122678785 ATTCCATCATAA---------------------------------------------------------CTTCTGACCATGTTCTGGGCCAAGGCTGTGTCTACAGTACAGGCTCCCCTCCCCCTGCCACCCCAACATGCTGGAGCCCAGAA---------GCCCTGGAAATCTAGAGGCTATGGCGGCTTTGTTGCTAAGTCCTAA--TGGAAACACC----GTCTTCCCCAT---TCTATATTAGTCATTCTCAGGAGAGTCCCAAAGCCTTGCCATT----------TGTACCCTAAACTTATGTTACTGGAAA-TGTTAGTGGAGGTAGTGAGGAAGAAACACAaaatttac----tcagaacaagctgagaatatgtagccatttta--ctaggctcaagactggttccatcttcctcataagccttcagtt-----gggattagaaaaggaat--------cttta--------acaatcttgtctttctatccagcctaaaatataacccaatagtttaaatagtctc i canFam3.chr1 I 12 I 73 s dasNov3.JH569188 662253 425 + 760995 ATAAAGCAACAAAACACTGTCATAATCTGACTACTTTTTTGGGCAAGGCAGCATATAACACTGTATTGCTTCC------------------------TACCTACA-----------------------------------CAT----CAGAAACCCAAGTTTTCTCAAGCTTCCTAAACTGAAGCCTGCTTTGATA-CAAAGTAGAAATTGGAA--------CAtctttccca----tctgtgttacttactcatggaggactcagaaagctgtaccaca----------tgtaccctc-----atgtcttgtgaaagttttagtgaaaTTGATAAAGTAGATCCTCAAATTTTACTCAGTTTGGATGAGATGAGCATACAtagctcctttg--tttagcttataactaatttgatcttcaccatataccgtcattc-----aggggtgaga---aact--------gtttttttccccctaaattcttct-ttctatccagtttaaaatgcaatccaatagtttaaatagtctc i dasNov3.JH569188 C 0 C 0 e saiBol1.JH378287 1361161 3627 - 2905041 I a score=24701.000000 s hg38.chr6_KB021644v2_alt 175736 4 + 185823 C--GTT s panTro5.chr6 173639294 6 + 175400573 CTTGTT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171864766 6 + 173848474 CTTGTT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11549927 6 - 12463322 CTTGTT i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170408340 6 + 172585720 CTTGTT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169151622 6 - 170955103 CTTGTT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8437870 6 + 10161646 CTTGTT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1468992 6 + 3144229 CTTGTT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96753710 6 + 98384682 GTTGTT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8317297 6 - 10857215 CTTGTT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15675672 6 - 23502949 CTTGTT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169964553 6 + 171630274 CTTGTT i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1328884 6 - 2164891 CTTGTT i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1575278 6 - 1813869 CCTGTT i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10997176 5 - 12073884 CAATT- i otoGar3.GL873575 C 0 C 0 s dasNov3.JH569188 662678 4 + 760995 -tttt- i dasNov3.JH569188 C 0 I 121 e saiBol1.JH378287 1361161 3627 - 2905041 I e canFam3.chr1 56232446 73 + 122678785 I e nomLeu3.chr3 156381458 4 + 157873769 I a score=45757.000000 s hg38.chr6_KB021644v2_alt 175740 7 + 185823 ATTCCTC s panTro5.chr6 173639300 7 + 175400573 ATTCCTC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171864772 7 + 173848474 ATTCCTC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11549933 7 - 12463322 ATTCCTC i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170408346 7 + 172585720 ATTGTTC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169151628 7 - 170955103 ATTGTTC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8437876 7 + 10161646 ATTGTTC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1468998 7 + 3144229 ATTGTTC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96753716 7 + 98384682 ATTGTTC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8317303 7 - 10857215 ATTGTTC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15675678 7 - 23502949 ATTGTTC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169964559 7 + 171630274 ATTGCTC i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1328890 7 - 2164891 ATTGCTC i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1575284 7 - 1813869 ATTGCTC i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 10997181 5 - 12073884 --TGCTG i otoGar3.GL873575 C 0 C 0 e saiBol1.JH378287 1361161 3627 - 2905041 I e dasNov3.JH569188 662682 121 + 760995 I e canFam3.chr1 56232446 73 + 122678785 I e nomLeu3.chr3 156381458 4 + 157873769 I a score=109913.000000 s hg38.chr6_KB021644v2_alt 175747 15 + 185823 ACTATGTATGCCACT s panTro5.chr6 173639307 15 + 175400573 ACTATGTATGCCACT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171864779 15 + 173848474 ACTATGTATGCCACT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11549940 15 - 12463322 ACTATGTATGCCACT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156381462 13 + 157873769 GTGATGGAG--CATG i nomLeu3.chr3 I 4 C 0 s rheMac8.chr4 170408353 15 + 172585720 ACCATGTATGCCACT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169151635 15 - 170955103 ACCATGTATGCCACT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8437883 15 + 10161646 ACCATGTATGCCACT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1469005 15 + 3144229 ACCATGTATGCCACT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96753723 15 + 98384682 ACCATGTATGCCACT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8317310 15 - 10857215 ACCATGTATGCCACT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15675685 15 - 23502949 GCCATGTATGCCACC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169964566 15 + 171630274 ACCACGTATGCCACT i calJac3.chr4 C 0 I 26 s cebCap1.NW_016107695v1 1328897 15 - 2164891 ACCACGTATGCCACT i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1575291 15 - 1813869 ACCACGCATGCCACT i aotNan1.NW_018494782v1 C 0 I 153 s otoGar3.GL873575 10997186 15 - 12073884 CCCCTGTGCCCTCCT i otoGar3.GL873575 C 0 C 0 e saiBol1.JH378287 1361161 3627 - 2905041 I e dasNov3.JH569188 662682 121 + 760995 I e canFam3.chr1 56232446 73 + 122678785 I a score=145638.000000 s hg38.chr6_KB021644v2_alt 175762 27 + 185823 GCGGGGCTGCCCGGTGCACAGGGTCTG s panTro5.chr6 173639322 27 + 175400573 GCGGGGCTGCCCGGTGCACAGGGTCTG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171864794 27 + 173848474 GCGGGGCTGCCCGGTGCACAGGGTCTG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11549955 27 - 12463322 GCGTGGCTGCCCGGTGCACAGGGTCTG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156381475 25 + 157873769 GTGGGAGCACCAGGTACACGGGGTC-- i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170408368 27 + 172585720 GCGGGGGTGCCCCGTCCACAGGGTCTG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169151650 27 - 170955103 GCGGGGGTGCCCCGTCCACAGGGTCTG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8437898 27 + 10161646 GCGGGGGTGCCCCGTCCACAGGGTCTG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1469020 27 + 3144229 GTGGGGGTGCCCTGTGCACAGGGTCTG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96753738 27 + 98384682 GCAGGGGTGCCCCGTGCACAGGGTCTG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8317325 27 - 10857215 GCGGGGGTGCCCCGTCAACAGGGTCTG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15675700 27 - 23502949 ATGGGGGTGCCCTGTGCACAGGGTCTG i colAng1.NW_012114488v1 C 0 C 0 s cebCap1.NW_016107695v1 1328912 27 - 2164891 GTGGGAATGCCCCGTGTACAGGGTCAG i cebCap1.NW_016107695v1 C 0 C 0 s otoGar3.GL873575 10997201 18 - 12073884 --GTGGGTGCCCC-------GGGTGAG i otoGar3.GL873575 C 0 C 0 e saiBol1.JH378287 1361161 3627 - 2905041 I e aotNan1.NW_018494782v1 1575306 153 - 1813869 I e calJac3.chr4 169964581 26 + 171630274 I e dasNov3.JH569188 662682 121 + 760995 I e canFam3.chr1 56232446 73 + 122678785 I a score=-2062.000000 s hg38.chr6_KB021644v2_alt 175789 1 + 185823 C s panTro5.chr6 173639349 1 + 175400573 C i panTro5.chr6 C 0 C 0 s panPan2.chr6 171864821 1 + 173848474 C i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11549982 1 - 12463322 C i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156381500 1 + 157873769 A i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170408395 1 + 172585720 G i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169151677 1 - 170955103 G i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8437925 1 + 10161646 G i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1469047 1 + 3144229 G i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96753765 1 + 98384682 G i chlSab2.chr13 C 0 I 60 s manLeu1.NW_012106474v1 8317352 1 - 10857215 G i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15675727 1 - 23502949 G i colAng1.NW_012114488v1 C 0 C 0 s otoGar3.GL873575 10997219 1 - 12073884 C i otoGar3.GL873575 C 0 C 0 e saiBol1.JH378287 1361161 3627 - 2905041 I e aotNan1.NW_018494782v1 1575306 153 - 1813869 I e cebCap1.NW_016107695v1 1328939 0 - 2164891 C e calJac3.chr4 169964581 26 + 171630274 I e dasNov3.JH569188 662682 121 + 760995 I e canFam3.chr1 56232446 73 + 122678785 I a score=17615.000000 s hg38.chr6_KB021644v2_alt 175790 3 + 185823 -GGT s panTro5.chr6 173639350 3 + 175400573 -GGT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171864822 3 + 173848474 -GGT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11549983 3 - 12463322 -GGT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156381501 3 + 157873769 -GGT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170408396 3 + 172585720 -GGT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169151678 3 - 170955103 -GGT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8437926 3 + 10161646 -GGT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1469048 3 + 3144229 -GGT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96753826 3 + 98384682 -GGT i chlSab2.chr13 I 60 C 0 s manLeu1.NW_012106474v1 8317353 3 - 10857215 -GGT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15675728 3 - 23502949 -GGT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169964607 3 + 171630274 -GGT i calJac3.chr4 I 26 C 0 s otoGar3.GL873575 10997220 3 - 12073884 TAG- i otoGar3.GL873575 C 0 C 0 e saiBol1.JH378287 1361161 3627 - 2905041 I e aotNan1.NW_018494782v1 1575306 153 - 1813869 I e cebCap1.NW_016107695v1 1328939 0 - 2164891 C e dasNov3.JH569188 662682 121 + 760995 I e canFam3.chr1 56232446 73 + 122678785 I a score=46662.000000 s hg38.chr6_KB021644v2_alt 175793 6 + 185823 ----GTGCAG s panTro5.chr6 173639353 6 + 175400573 ----GTGCAG i panTro5.chr6 C 0 I 61 s panPan2.chr6 171864825 6 + 173848474 ----GTGCAG i panPan2.chr6 C 0 I 51 s gorGor5.CYUI01015032v1 11549986 6 - 12463322 ----GTGCAG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156381504 6 + 157873769 ----GTGCAG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170408399 6 + 172585720 ----GTGCAG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169151681 6 - 170955103 ----GTGCAG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8437929 6 + 10161646 ----GTGCAG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1469051 6 + 3144229 ----GTGCAG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96753829 6 + 98384682 ----GTGCAG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8317356 6 - 10857215 ----GTGCAG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15675731 6 - 23502949 ----GTGCAG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169964610 6 + 171630274 ----GTGCAG i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1328939 6 - 2164891 ----GTGCAG i cebCap1.NW_016107695v1 C 0 C 0 s otoGar3.GL873575 10997223 7 - 12073884 GGGAATG--- i otoGar3.GL873575 C 0 C 0 e saiBol1.JH378287 1361161 3627 - 2905041 I e aotNan1.NW_018494782v1 1575306 153 - 1813869 I e dasNov3.JH569188 662682 121 + 760995 I e canFam3.chr1 56232446 73 + 122678785 I a score=49012.000000 s hg38.chr6_KB021644v2_alt 175799 7 + 185823 TCAGCCC s panTro5.chr6 173639420 7 + 175400573 TCAGCCC i panTro5.chr6 I 61 C 0 s gorGor5.CYUI01015032v1 11549992 7 - 12463322 TCAGCCC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156381510 7 + 157873769 TCAGCCC i nomLeu3.chr3 C 0 T 59 s rheMac8.chr4 170408405 7 + 172585720 TCAGGCC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169151687 7 - 170955103 TCAGGCC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8437935 7 + 10161646 TCAGGCC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1469057 7 + 3144229 TCAGGCC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96753835 7 + 98384682 TCAGCCC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8317362 7 - 10857215 TCAGGCC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15675737 7 - 23502949 TCAGCCC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169964616 7 + 171630274 TCAGCCC i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1328945 7 - 2164891 TCAGCCC i cebCap1.NW_016107695v1 C 0 C 0 s otoGar3.GL873575 10997230 7 - 12073884 TCACCCC i otoGar3.GL873575 C 0 C 0 e saiBol1.JH378287 1361161 3627 - 2905041 I e aotNan1.NW_018494782v1 1575306 153 - 1813869 I e dasNov3.JH569188 662682 121 + 760995 I e canFam3.chr1 56232446 73 + 122678785 I e panPan2.chr6 171864831 51 + 173848474 I a score=31980.000000 s hg38.chr6_KB021644v2_alt 175806 4 + 185823 TCCT s panTro5.chr6 173639427 4 + 175400573 TCCT i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11549999 4 - 12463322 TCCT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156381458 4 + 157873769 TCCT i nomLeu3.chr3 T 59 C 0 s rheMac8.chr4 170408412 4 + 172585720 TCCT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169151694 4 - 170955103 TCCT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8437942 4 + 10161646 TCCT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1469064 4 + 3144229 TCCT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96753842 4 + 98384682 TCCT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8317369 4 - 10857215 TCCT i manLeu1.NW_012106474v1 C 0 M 4585 s colAng1.NW_012114488v1 15675744 4 - 23502949 TCCT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169964623 4 + 171630274 TCCT i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1328952 4 - 2164891 TCCT i cebCap1.NW_016107695v1 C 0 C 0 s otoGar3.GL873575 10997237 4 - 12073884 TCCA i otoGar3.GL873575 C 0 C 0 e saiBol1.JH378287 1361161 3627 - 2905041 I e aotNan1.NW_018494782v1 1575306 153 - 1813869 I e dasNov3.JH569188 662682 121 + 760995 I e canFam3.chr1 56232446 73 + 122678785 I e panPan2.chr6 171864831 51 + 173848474 I a score=72025.000000 s hg38.chr6_KB021644v2_alt 175810 15 + 185823 GTGATGGAAGGTGAT s panTro5.chr6 173639431 15 + 175400573 GTGATGGAGCATGGT i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11550003 15 - 12463322 GTGATGGAAGGTGGT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156381462 15 + 157873769 GTGATGGAGCATGGT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170408416 15 + 172585720 GTGATGGAAGGCAGT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169151698 15 - 170955103 GTGATGGAAGGCGGT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8437946 15 + 10161646 GTGATGGAAGGCGGT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1469068 15 + 3144229 GTGATGGAAGGCCGT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96753846 15 + 98384682 GTGATGGAAGGTGGT i chlSab2.chr13 C 0 T 95 s colAng1.NW_012114488v1 15675748 15 - 23502949 GTGATGGAAGGCCAT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169964627 15 + 171630274 GGGACGGAGGGTGGT i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1328956 15 - 2164891 GTGATGGAGGGTGGT i cebCap1.NW_016107695v1 C 0 C 0 s otoGar3.GL873575 10997241 15 - 12073884 GGGATGAAGGTCACT i otoGar3.GL873575 C 0 C 0 e saiBol1.JH378287 1361161 3627 - 2905041 I e aotNan1.NW_018494782v1 1575306 153 - 1813869 I e dasNov3.JH569188 662682 121 + 760995 I e canFam3.chr1 56232446 73 + 122678785 I e manLeu1.NW_012106474v1 8317373 4585 - 10857215 M e panPan2.chr6 171864831 51 + 173848474 I a score=36408.000000 s hg38.chr6_KB021644v2_alt 175825 9 + 185823 GGGAACACC s panTro5.chr6 173639446 9 + 175400573 GGGAACACC i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11550018 9 - 12463322 AGGAACACC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156381477 9 + 157873769 GGGAGCACC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170408431 9 + 172585720 GGGAATATC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169151713 9 - 170955103 GGGAATATC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8437961 9 + 10161646 GGGAATATC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1469083 9 + 3144229 GGTGACACC i cerAty1.NW_012002071v1 C 0 C 0 s colAng1.NW_012114488v1 15675763 9 - 23502949 GGTGACACT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169964642 9 + 171630274 GGGAAGACC i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1328971 9 - 2164891 GGGAACACC i cebCap1.NW_016107695v1 C 0 C 0 s otoGar3.GL873575 10997256 9 - 12073884 GGGAGCACC i otoGar3.GL873575 C 0 I 5995 e saiBol1.JH378287 1361161 3627 - 2905041 I e aotNan1.NW_018494782v1 1575306 153 - 1813869 I e dasNov3.JH569188 662682 121 + 760995 I e canFam3.chr1 56232446 73 + 122678785 I e chlSab2.chr13 96753861 95 + 98384682 T e manLeu1.NW_012106474v1 8317373 4585 - 10857215 M e panPan2.chr6 171864831 51 + 173848474 I a score=53598.000000 s hg38.chr6_KB021644v2_alt 175834 14 + 185823 AGGTACACGGGGTC s panTro5.chr6 173639455 14 + 175400573 AGGTACACGGGGTC i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11550027 14 - 12463322 AGGTACACGGGGTC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156381486 14 + 157873769 AGGTACACGGGGTC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170408440 14 + 172585720 AGGTACATGGGGTC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169151722 14 - 170955103 AGGTACACGGGGTC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8437970 14 + 10161646 AGGTCCATGGGGTC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1469092 14 + 3144229 AGGTCCACGGGGTC i cerAty1.NW_012002071v1 C 0 C 0 s colAng1.NW_012114488v1 15675772 14 - 23502949 AGGTACATGGGGTC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169964651 13 + 171630274 C-GTGCACAGTGTC i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1328980 14 - 2164891 AGGCACACAGGGTC i cebCap1.NW_016107695v1 C 0 C 0 e otoGar3.GL873575 10997265 5995 - 12073884 I e saiBol1.JH378287 1361161 3627 - 2905041 I e aotNan1.NW_018494782v1 1575306 153 - 1813869 I e dasNov3.JH569188 662682 121 + 760995 I e canFam3.chr1 56232446 73 + 122678785 I e chlSab2.chr13 96753861 95 + 98384682 T e manLeu1.NW_012106474v1 8317373 4585 - 10857215 M e panPan2.chr6 171864831 51 + 173848474 I a score=2441.000000 s hg38.chr6_KB021644v2_alt 175848 1 + 185823 A s panTro5.chr6 173639469 1 + 175400573 A i panTro5.chr6 C 0 C 0 s panPan2.chr6 171864882 1 + 173848474 G i panPan2.chr6 I 51 C 0 s gorGor5.CYUI01015032v1 11550041 1 - 12463322 A i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156381500 1 + 157873769 A i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170408454 1 + 172585720 A i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169151736 1 - 170955103 A i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8437984 1 + 10161646 A i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1469106 1 + 3144229 A i cerAty1.NW_012002071v1 C 0 C 0 s colAng1.NW_012114488v1 15675786 1 - 23502949 A i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169964664 1 + 171630274 T i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1328994 1 - 2164891 A i cebCap1.NW_016107695v1 C 0 C 0 e otoGar3.GL873575 10997265 5995 - 12073884 I e saiBol1.JH378287 1361161 3627 - 2905041 I e aotNan1.NW_018494782v1 1575306 153 - 1813869 I e dasNov3.JH569188 662682 121 + 760995 I e canFam3.chr1 56232446 73 + 122678785 I e chlSab2.chr13 96753861 95 + 98384682 T e manLeu1.NW_012106474v1 8317373 4585 - 10857215 M a score=20238.000000 s hg38.chr6_KB021644v2_alt 175849 3 + 185823 GGT s panTro5.chr6 173639470 3 + 175400573 GGT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171864883 3 + 173848474 GGT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11550042 3 - 12463322 GGT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156381501 3 + 157873769 GGT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170408455 3 + 172585720 GGT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169151737 3 - 170955103 GGT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8437985 3 + 10161646 GGT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1469107 3 + 3144229 GGT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96753766 3 + 98384682 GGT i chlSab2.chr13 T 95 C 0 s colAng1.NW_012114488v1 15675787 3 - 23502949 GGT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169964665 3 + 171630274 GGG i calJac3.chr4 C 0 I 2 s cebCap1.NW_016107695v1 1328995 3 - 2164891 GGT i cebCap1.NW_016107695v1 C 0 T 59 e otoGar3.GL873575 10997265 5995 - 12073884 I e saiBol1.JH378287 1361161 3627 - 2905041 I e aotNan1.NW_018494782v1 1575306 153 - 1813869 I e dasNov3.JH569188 662682 121 + 760995 I e canFam3.chr1 56232446 73 + 122678785 I e manLeu1.NW_012106474v1 8317373 4585 - 10857215 M a score=93632.000000 s hg38.chr6_KB021644v2_alt 175852 13 + 185823 GTGCAGTCAGCCC s panTro5.chr6 173639473 13 + 175400573 GTGCAGTCAGCCC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171864886 13 + 173848474 GTGCAGTCAGACC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11550045 13 - 12463322 GTGCAGTCAGCCC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156381504 13 + 157873769 GTGCAGTCAGCCC i nomLeu3.chr3 C 0 T 59 s rheMac8.chr4 170408458 13 + 172585720 GTGCAGTCAGCCC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169151740 13 - 170955103 GTGCAGTCAGCCC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8437988 13 + 10161646 GTGCAGTCAGCCC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1469110 13 + 3144229 GTGCAGTCAGCCC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96753769 13 + 98384682 GTGCAGTCAGGCC i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15675790 13 - 23502949 GTGCAGTCAGCCC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169964670 13 + 171630274 GTGCAGTCAGCCC i calJac3.chr4 I 2 C 0 s cebCap1.NW_016107695v1 1328939 13 - 2164891 GTGCAGTCAGCCC i cebCap1.NW_016107695v1 T 59 C 0 e otoGar3.GL873575 10997265 5995 - 12073884 I e saiBol1.JH378287 1361161 3627 - 2905041 I e aotNan1.NW_018494782v1 1575306 153 - 1813869 I e dasNov3.JH569188 662682 121 + 760995 I e canFam3.chr1 56232446 73 + 122678785 I e manLeu1.NW_012106474v1 8317373 4585 - 10857215 M a score=107151.000000 s hg38.chr6_KB021644v2_alt 175865 17 + 185823 TCCTGTGATGGAAGGTG s panTro5.chr6 173639486 17 + 175400573 TCCTGTGATGGAAGGTG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171864899 17 + 173848474 TCCTGTGATGGAAGGTG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11550058 17 - 12463322 TCCTGTGATGGAAGGTG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156381458 17 + 157873769 TCCTGTGATGGAGCATG i nomLeu3.chr3 T 59 C 0 s rheMac8.chr4 170408471 17 + 172585720 TTCTGTGATGGAGGGCG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169151753 17 - 170955103 TTCTGTGATGGAGGGCG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8438001 17 + 10161646 TCCTGTGATGGAAGGCA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1469123 17 + 3144229 TCCTGTGATGGAAGGTG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96753782 17 + 98384682 TCCTGTGATGGAGGGCG i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15675803 17 - 23502949 TCCTGTGATGGAAGGTG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169964683 17 + 171630274 TCCTGTGATGGAGGACG i calJac3.chr4 C 0 T 119 s cebCap1.NW_016107695v1 1328952 17 - 2164891 TCCTGTGATGGAGGGTG i cebCap1.NW_016107695v1 C 0 C 0 e otoGar3.GL873575 10997265 5995 - 12073884 I e saiBol1.JH378287 1361161 3627 - 2905041 I e aotNan1.NW_018494782v1 1575306 153 - 1813869 I e dasNov3.JH569188 662682 121 + 760995 I e canFam3.chr1 56232446 73 + 122678785 I e manLeu1.NW_012106474v1 8317373 4585 - 10857215 M a score=128484.000000 s hg38.chr6_KB021644v2_alt 175882 23 + 185823 GTGGGA-ACACCAGGTACACGGGG s panTro5.chr6 173639503 23 + 175400573 GTGGGA-ACACCAGGTACACAGGG i panTro5.chr6 C 0 I 2 s panPan2.chr6 171864916 23 + 173848474 GTGGGA-ACACCAGGTACACAGGG i panPan2.chr6 C 0 T 108 s gorGor5.CYUI01015032v1 11550075 23 - 12463322 GTGGGA-ACACCAGGTACACAGGG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156381475 23 + 157873769 GTGGGA-GCACCAGGTACACGGGG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170408488 23 + 172585720 GTGGGG-ACACCAGGTCCATGGGG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169151770 23 - 170955103 GTGGGG-ACACCAGGTCCATGGGG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8438018 23 + 10161646 GTGGGA-ATATCAGGTACATGGGG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1469140 23 + 3144229 GTGGGA-ATATCAGGTACATGGGG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96753799 24 + 98384682 GTGGGGAATATCAGGTACACGGGG i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15675820 23 - 23502949 GTGGGA-ATATCAGGTACACGGGG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169964581 23 + 171630274 GTGGGA-ACGCCCCGTGTACAGGG i calJac3.chr4 T 119 C 0 s cebCap1.NW_016107695v1 1328969 23 - 2164891 GTGGGA-ACACCAGGCACACAGGG i cebCap1.NW_016107695v1 C 0 C 0 e otoGar3.GL873575 10997265 5995 - 12073884 I e saiBol1.JH378287 1361161 3627 - 2905041 I e aotNan1.NW_018494782v1 1575306 153 - 1813869 I e dasNov3.JH569188 662682 121 + 760995 I e canFam3.chr1 56232446 73 + 122678785 I e manLeu1.NW_012106474v1 8317373 4585 - 10857215 M a score=58882.000000 s hg38.chr6_KB021644v2_alt 175905 11 + 185823 TCAGGTGTGCA s panTro5.chr6 173639528 11 + 175400573 TGGGGTGTGCA i panTro5.chr6 I 2 C 0 s gorGor5.CYUI01015032v1 11550098 11 - 12463322 TCTGGAGTGCA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156381498 11 + 157873769 TCAGGTGTGCA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170408511 11 + 172585720 TCAGGTGTGCA i rheMac8.chr4 C 0 I 1 s macFas5.chr4 169151793 11 - 170955103 TCAGGTGTGCA i macFas5.chr4 C 0 I 1 s macNem1.NW_012011000v1 8438041 11 + 10161646 TCAGGTGTGCA i macNem1.NW_012011000v1 C 0 I 60 s cerAty1.NW_012002071v1 1469163 11 + 3144229 TCAGGTGTGCA i cerAty1.NW_012002071v1 C 0 I 4 s chlSab2.chr13 96753823 11 + 98384682 TCAGGTGTGCA i chlSab2.chr13 C 0 I 1 s colAng1.NW_012114488v1 15675843 11 - 23502949 TCAGGTTTGCA i colAng1.NW_012114488v1 C 0 T 59 s calJac3.chr4 169964604 11 + 171630274 TCAGGTGTGCA i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1328992 11 - 2164891 TCAGGTGTGCA i cebCap1.NW_016107695v1 C 0 C 0 e otoGar3.GL873575 10997265 5995 - 12073884 I e saiBol1.JH378287 1361161 3627 - 2905041 I e aotNan1.NW_018494782v1 1575306 153 - 1813869 I e dasNov3.JH569188 662682 121 + 760995 I e canFam3.chr1 56232446 73 + 122678785 I e manLeu1.NW_012106474v1 8317373 4585 - 10857215 M e panPan2.chr6 171864939 108 + 173848474 T a score=750.000000 s hg38.chr6_KB021644v2_alt 175916 1 + 185823 C s panTro5.chr6 173639539 1 + 175400573 G i panTro5.chr6 C 0 T 181 s gorGor5.CYUI01015032v1 11550109 1 - 12463322 G i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156381509 1 + 157873769 G i nomLeu3.chr3 C 0 C 0 s colAng1.NW_012114488v1 15675795 1 - 23502949 G i colAng1.NW_012114488v1 T 59 C 0 s calJac3.chr4 169964615 1 + 171630274 G i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1329003 1 - 2164891 G i cebCap1.NW_016107695v1 C 0 C 0 e otoGar3.GL873575 10997265 5995 - 12073884 I e saiBol1.JH378287 1361161 3627 - 2905041 I e aotNan1.NW_018494782v1 1575306 153 - 1813869 I e dasNov3.JH569188 662682 121 + 760995 I e canFam3.chr1 56232446 73 + 122678785 I e chlSab2.chr13 96753834 1 + 98384682 I e cerAty1.NW_012002071v1 1469174 4 + 3144229 I e manLeu1.NW_012106474v1 8317373 4585 - 10857215 M e macNem1.NW_012011000v1 8438052 60 + 10161646 I e rheMac8.chr4 170408522 1 + 172585720 I e macFas5.chr4 169151804 1 - 170955103 I e panPan2.chr6 171864939 108 + 173848474 T a score=275095.000000 s hg38.chr6_KB021644v2_alt 175917 40 + 185823 TCAGCCCTCCTGTGATGGAAGGTGGTGGGAACACCAGGTA s panTro5.chr6 173639359 40 + 175400573 TCAGCCCTCCTGTGATGGAAGGTGGTGGGAACACCAGGTA i panTro5.chr6 T 181 C 0 s panPan2.chr6 171864831 40 + 173848474 TCAGCCCTCCTGTGATGGAAGGTGGTGGGAACACCAGGTA i panPan2.chr6 T 108 C 0 s gorGor5.CYUI01015032v1 11550110 40 - 12463322 TCAGCTCTCCTGTGATGGAGCGTGGTGGGAACACTAGGTG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156381510 40 + 157873769 TCAGCCCTCCTGTGATGGAAGGTGGTGGGAACACCAGGTA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170408523 40 + 172585720 TCAGCCCTCCTGTGATGGAAGGCTGTGGTGACACCAGGTC i rheMac8.chr4 I 1 C 0 s macFas5.chr4 169151805 40 - 170955103 TCAGGCCTCCTGTGATGGAAGGCGGTGGTGACACCAGGTA i macFas5.chr4 I 1 C 0 s macNem1.NW_012011000v1 8438112 40 + 10161646 TCAGCCCTCCTGTGATGGAAGGCGGTGGGAATATCAGGTA i macNem1.NW_012011000v1 I 60 C 0 s cerAty1.NW_012002071v1 1469178 40 + 3144229 TCAGCCCTCCTGTGATGGAAGGTGGTGGGAATATCAGGTA i cerAty1.NW_012002071v1 I 4 C 0 s chlSab2.chr13 96753835 40 + 98384682 TCAGCCCTCCTGTGATGGAAGGTGGTGGGAATATCAGGTA i chlSab2.chr13 I 1 C 0 s colAng1.NW_012114488v1 15675796 40 - 23502949 TCAGCCCTCCTGTGATGGAAGGTGGTGGGAATATCAGGTA i colAng1.NW_012114488v1 C 0 T 123 s calJac3.chr4 169964616 39 + 171630274 TCAGCCCTCCTGGGACGGAGGGTGGTGGGAAGAC-CCGTG i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1329004 40 - 2164891 TCAGCCTTCCTGTGATGGAGGGTGGTGGGAACACTCTGTA i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1575459 40 - 1813869 TCAGCCCTCCTGTGATGGAGGATGGTGAGAACACCAGGTA i aotNan1.NW_018494782v1 I 153 C 0 e otoGar3.GL873575 10997265 5995 - 12073884 I e saiBol1.JH378287 1361161 3627 - 2905041 I e dasNov3.JH569188 662682 121 + 760995 I e canFam3.chr1 56232446 73 + 122678785 I e manLeu1.NW_012106474v1 8317373 4585 - 10857215 M a score=53622.000000 s hg38.chr6_KB021644v2_alt 175957 9 + 185823 CACGGGGTC s panTro5.chr6 173639399 9 + 175400573 CACGGGGTC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171864871 9 + 173848474 CACGGGGTC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11550150 9 - 12463322 CACAGGGTC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156381550 9 + 157873769 CACGGGGTC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170408563 9 + 172585720 CATGGGGTC i rheMac8.chr4 C 0 I 59 s macFas5.chr4 169151845 9 - 170955103 CACGGGGTC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8438152 9 + 10161646 CATGGGGTC i macNem1.NW_012011000v1 C 0 T 59 s cerAty1.NW_012002071v1 1469218 9 + 3144229 CACGGGGTC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96753875 9 + 98384682 CACGGGGTC i chlSab2.chr13 C 0 T 133 s calJac3.chr4 169964655 9 + 171630274 CACAGTGTC i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1329044 9 - 2164891 CACAGTGTC i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1575499 9 - 1813869 CATAGTGTC i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10997265 5995 - 12073884 I e saiBol1.JH378287 1361161 3627 - 2905041 I e dasNov3.JH569188 662682 121 + 760995 I e colAng1.NW_012114488v1 15675836 123 - 23502949 T e canFam3.chr1 56232446 73 + 122678785 I e manLeu1.NW_012106474v1 8317373 4585 - 10857215 M a score=3880.000000 s hg38.chr6_KB021644v2_alt 175966 2 + 185823 TG s panTro5.chr6 173639408 2 + 175400573 TG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171864880 2 + 173848474 TG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11550159 2 - 12463322 TG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156381559 2 + 157873769 TG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170408631 2 + 172585720 AG i rheMac8.chr4 I 59 C 0 s cerAty1.NW_012002071v1 1469227 2 + 3144229 AG i cerAty1.NW_012002071v1 C 0 C 0 s calJac3.chr4 169964664 2 + 171630274 TG i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1329053 2 - 2164891 TG i cebCap1.NW_016107695v1 C 0 C 0 e otoGar3.GL873575 10997265 5995 - 12073884 I e saiBol1.JH378287 1361161 3627 - 2905041 I e aotNan1.NW_018494782v1 1575508 0 - 1813869 C e dasNov3.JH569188 662682 121 + 760995 I e colAng1.NW_012114488v1 15675836 123 - 23502949 T e canFam3.chr1 56232446 73 + 122678785 I e chlSab2.chr13 96753884 133 + 98384682 T e manLeu1.NW_012106474v1 8317373 4585 - 10857215 M e macNem1.NW_012011000v1 8438161 59 + 10161646 T e macFas5.chr4 169151854 0 - 170955103 C a score=2329.000000 s hg38.chr6_KB021644v2_alt 175968 1 + 185823 G s panTro5.chr6 173639410 1 + 175400573 G i panTro5.chr6 C 0 T 33 s panPan2.chr6 171864882 1 + 173848474 G i panPan2.chr6 C 0 T 61 s gorGor5.CYUI01015032v1 11550161 1 - 12463322 G i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156381561 1 + 157873769 G i nomLeu3.chr3 C 0 I 59 s macFas5.chr4 169151854 1 - 170955103 A i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8438102 1 + 10161646 A i macNem1.NW_012011000v1 T 59 C 0 s cerAty1.NW_012002071v1 1469229 1 + 3144229 G i cerAty1.NW_012002071v1 C 0 C 0 s calJac3.chr4 169964666 1 + 171630274 G i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1329055 1 - 2164891 G i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1575508 1 - 1813869 A i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10997265 5995 - 12073884 I e saiBol1.JH378287 1361161 3627 - 2905041 I e dasNov3.JH569188 662682 121 + 760995 I e colAng1.NW_012114488v1 15675836 123 - 23502949 T e canFam3.chr1 56232446 73 + 122678785 I e chlSab2.chr13 96753884 133 + 98384682 T e manLeu1.NW_012106474v1 8317373 4585 - 10857215 M e rheMac8.chr4 170408633 0 + 172585720 C a score=15466.000000 s hg38.chr6_KB021644v2_alt 175969 4 + 185823 GGTG s panPan2.chr6 171864822 4 + 173848474 GGTG i panPan2.chr6 T 61 C 0 s gorGor5.CYUI01015032v1 11550162 4 - 12463322 GGTG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156381621 4 + 157873769 GCTG i nomLeu3.chr3 I 59 C 0 s rheMac8.chr4 170408633 3 + 172585720 -GTG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169151855 4 - 170955103 GGTG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8438103 4 + 10161646 GGTG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1469230 4 + 3144229 AGTG i cerAty1.NW_012002071v1 C 0 T 60 s calJac3.chr4 169964667 4 + 171630274 GGTG i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1329056 4 - 2164891 GGTG i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1575509 4 - 1813869 GGTA i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10997265 5995 - 12073884 I e saiBol1.JH378287 1361161 3627 - 2905041 I e dasNov3.JH569188 662682 121 + 760995 I e colAng1.NW_012114488v1 15675836 123 - 23502949 T e canFam3.chr1 56232446 73 + 122678785 I e chlSab2.chr13 96753884 133 + 98384682 T e manLeu1.NW_012106474v1 8317373 4585 - 10857215 M e panTro5.chr6 173639411 33 + 175400573 T a score=2997.000000 s hg38.chr6_KB021644v2_alt 175973 1 + 185823 T s panPan2.chr6 171864826 1 + 173848474 T i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11550166 1 - 12463322 T i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156381625 1 + 157873769 T i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170408636 1 + 172585720 T i rheMac8.chr4 C 0 I 3 s macFas5.chr4 169151859 1 - 170955103 T i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8438107 1 + 10161646 T i macNem1.NW_012011000v1 C 0 C 0 s calJac3.chr4 169964671 1 + 171630274 T i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1329060 1 - 2164891 T i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1575513 1 - 1813869 C i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10997265 5995 - 12073884 I e saiBol1.JH378287 1361161 3627 - 2905041 I e dasNov3.JH569188 662682 121 + 760995 I e colAng1.NW_012114488v1 15675836 123 - 23502949 T e canFam3.chr1 56232446 73 + 122678785 I e chlSab2.chr13 96753884 133 + 98384682 T e cerAty1.NW_012002071v1 1469234 60 + 3144229 T e manLeu1.NW_012106474v1 8317373 4585 - 10857215 M e panTro5.chr6 173639411 33 + 175400573 T a score=16635.000000 s hg38.chr6_KB021644v2_alt 175974 4 + 185823 GCAG s panPan2.chr6 171864827 4 + 173848474 GCAG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11550167 4 - 12463322 GCAC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156381626 4 + 157873769 GCAG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170408640 4 + 172585720 GCAG i rheMac8.chr4 I 3 C 0 s macFas5.chr4 169151860 4 - 170955103 GCAG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8438108 4 + 10161646 GCAG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1469174 4 + 3144229 GCAG i cerAty1.NW_012002071v1 T 60 T 4 s calJac3.chr4 169964672 4 + 171630274 GCAG i calJac3.chr4 C 0 I 119 s cebCap1.NW_016107695v1 1329061 4 - 2164891 GTAG i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1575514 4 - 1813869 ACAG i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10997265 5995 - 12073884 I e saiBol1.JH378287 1361161 3627 - 2905041 I e dasNov3.JH569188 662682 121 + 760995 I e colAng1.NW_012114488v1 15675836 123 - 23502949 T e canFam3.chr1 56232446 73 + 122678785 I e chlSab2.chr13 96753884 133 + 98384682 T e manLeu1.NW_012106474v1 8317373 4585 - 10857215 M e panTro5.chr6 173639411 33 + 175400573 T a score=74673.000000 s hg38.chr6_KB021644v2_alt 175978 19 + 185823 TCAGCTCTCTTGTGATGGA s panPan2.chr6 171864831 19 + 173848474 TCAGCCCTCCTGTGATGGA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11550171 19 - 12463322 TCAGCCCTCCTGTGATGGA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156381630 19 + 157873769 TCAGCCCTCCTGTGATGGA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170408644 19 + 172585720 TCAGGCCTCCTGTGATGGA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169151864 19 - 170955103 TCAGCCCTCCTGTGATGGA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8438112 19 + 10161646 TCAGCCCTCCTGTGATGGA i macNem1.NW_012011000v1 C 0 C 0 s calJac3.chr4 169964795 19 + 171630274 TGAGCCCTCCTGTGATGGA i calJac3.chr4 I 119 C 0 s cebCap1.NW_016107695v1 1329065 19 - 2164891 TCAGCCCTCCTGTGATGGA i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1575518 19 - 1813869 TCAACCCTCCTGTGATGGA i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10997265 5995 - 12073884 I e saiBol1.JH378287 1361161 3627 - 2905041 I e dasNov3.JH569188 662682 121 + 760995 I e colAng1.NW_012114488v1 15675836 123 - 23502949 T e canFam3.chr1 56232446 73 + 122678785 I e chlSab2.chr13 96753884 133 + 98384682 T e cerAty1.NW_012002071v1 1469178 4 + 3144229 T e manLeu1.NW_012106474v1 8317373 4585 - 10857215 M e panTro5.chr6 173639411 33 + 175400573 T a score=1435.000000 s hg38.chr6_KB021644v2_alt 175997 1 + 185823 G s panTro5.chr6 173639378 1 + 175400573 A i panTro5.chr6 T 33 C 0 s panPan2.chr6 171864850 1 + 173848474 A i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11550190 1 - 12463322 A i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156381649 1 + 157873769 G i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170408663 1 + 172585720 A i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169151883 1 - 170955103 A i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8438131 1 + 10161646 A i macNem1.NW_012011000v1 C 0 C 0 s calJac3.chr4 169964814 1 + 171630274 G i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1329084 1 - 2164891 G i cebCap1.NW_016107695v1 C 0 T 146 s aotNan1.NW_018494782v1 1575537 1 - 1813869 G i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10997265 5995 - 12073884 I e saiBol1.JH378287 1361161 3627 - 2905041 I e dasNov3.JH569188 662682 121 + 760995 I e colAng1.NW_012114488v1 15675836 123 - 23502949 T e canFam3.chr1 56232446 73 + 122678785 I e chlSab2.chr13 96753884 133 + 98384682 T e cerAty1.NW_012002071v1 1469178 4 + 3144229 T e manLeu1.NW_012106474v1 8317373 4585 - 10857215 M a score=48893.000000 s hg38.chr6_KB021644v2_alt 175998 17 + 185823 TGTGGTGGGAACACCAG s panTro5.chr6 173639379 17 + 175400573 GGTGGTGGGAACACCAG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171864851 17 + 173848474 GGTGGTGGGAACACCAG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11550191 17 - 12463322 GGTGGTGGGAACACCAG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156381650 17 + 157873769 GGCGGTGGGATCACCAG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170408664 17 + 172585720 GGCGGTGGGAATATCAG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169151884 17 - 170955103 GGTGGTGGGAATATCAG i macFas5.chr4 C 0 T 47 s macNem1.NW_012011000v1 8438132 17 + 10161646 GGCGGTGGGAATATCAG i macNem1.NW_012011000v1 C 0 C 0 s aotNan1.NW_018494782v1 1575538 17 - 1813869 GGTGGTGGGAACACCAG i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10997265 5995 - 12073884 I e saiBol1.JH378287 1361161 3627 - 2905041 I e cebCap1.NW_016107695v1 1329085 146 - 2164891 T e calJac3.chr4 169964815 0 + 171630274 C e dasNov3.JH569188 662682 121 + 760995 I e colAng1.NW_012114488v1 15675836 123 - 23502949 T e canFam3.chr1 56232446 73 + 122678785 I e chlSab2.chr13 96753884 133 + 98384682 T e cerAty1.NW_012002071v1 1469178 4 + 3144229 T e manLeu1.NW_012106474v1 8317373 4585 - 10857215 M a score=9259.000000 s hg38.chr6_KB021644v2_alt 176015 3 + 185823 GTG s panTro5.chr6 173639396 3 + 175400573 GTA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171864868 3 + 173848474 GTA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11550208 3 - 12463322 GTA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156381667 3 + 157873769 GTA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170408681 3 + 172585720 GTA i rheMac8.chr4 C 0 C 0 s macNem1.NW_012011000v1 8438149 3 + 10161646 GTA i macNem1.NW_012011000v1 C 0 T 238 s chlSab2.chr13 96753751 3 + 98384682 GTG i chlSab2.chr13 T 133 C 0 s colAng1.NW_012114488v1 15675713 3 - 23502949 GTG i colAng1.NW_012114488v1 T 123 C 0 s calJac3.chr4 169964815 2 + 171630274 -GA i calJac3.chr4 C 0 C 0 s aotNan1.NW_018494782v1 1575555 3 - 1813869 GTA i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10997265 5995 - 12073884 I e saiBol1.JH378287 1361161 3627 - 2905041 I e cebCap1.NW_016107695v1 1329085 146 - 2164891 T e dasNov3.JH569188 662682 121 + 760995 I e canFam3.chr1 56232446 73 + 122678785 I e cerAty1.NW_012002071v1 1469178 4 + 3144229 T e manLeu1.NW_012106474v1 8317373 4585 - 10857215 M e macFas5.chr4 169151901 47 - 170955103 T a score=34104.000000 s hg38.chr6_KB021644v2_alt 176018 9 + 185823 CACAGGGTC s panTro5.chr6 173639399 9 + 175400573 CACGGGGTC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171864871 9 + 173848474 CACGGGGTC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11550211 9 - 12463322 CATGGGGTC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156381670 9 + 157873769 CACAGGGTC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170408684 9 + 172585720 CATGGGGTC i rheMac8.chr4 C 0 T 121 s macNem1.NW_012011000v1 8437914 9 + 10161646 CACAGGGTC i macNem1.NW_012011000v1 T 238 C 0 s chlSab2.chr13 96753754 9 + 98384682 CACAGGGTC i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15675716 9 - 23502949 CACAGGGTC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169964817 9 + 171630274 CAGTGTGTC i calJac3.chr4 C 0 C 0 s aotNan1.NW_018494782v1 1575558 9 - 1813869 CATGGTGTC i aotNan1.NW_018494782v1 C 0 T 261 e otoGar3.GL873575 10997265 5995 - 12073884 I e saiBol1.JH378287 1361161 3627 - 2905041 I e cebCap1.NW_016107695v1 1329085 146 - 2164891 T e dasNov3.JH569188 662682 121 + 760995 I e canFam3.chr1 56232446 73 + 122678785 I e cerAty1.NW_012002071v1 1469178 4 + 3144229 T e manLeu1.NW_012106474v1 8317373 4585 - 10857215 M e macFas5.chr4 169151901 47 - 170955103 T a score=5348.000000 s hg38.chr6_KB021644v2_alt 176027 2 + 185823 TG s panTro5.chr6 173639408 2 + 175400573 TG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171864880 2 + 173848474 TG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11550220 2 - 12463322 TG i gorGor5.CYUI01015032v1 C 0 C 0 s macNem1.NW_012011000v1 8437923 2 + 10161646 TG i macNem1.NW_012011000v1 C 0 C 0 s chlSab2.chr13 96753763 2 + 98384682 TG i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15675725 2 - 23502949 TG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169964826 2 + 171630274 TG i calJac3.chr4 C 0 C 0 e otoGar3.GL873575 10997265 5995 - 12073884 I e saiBol1.JH378287 1361161 3627 - 2905041 I e aotNan1.NW_018494782v1 1575567 261 - 1813869 T e cebCap1.NW_016107695v1 1329085 146 - 2164891 T e dasNov3.JH569188 662682 121 + 760995 I e canFam3.chr1 56232446 73 + 122678785 I e cerAty1.NW_012002071v1 1469178 4 + 3144229 T e nomLeu3.chr3 156381679 0 + 157873769 C e manLeu1.NW_012106474v1 8317373 4585 - 10857215 M e rheMac8.chr4 170408693 121 + 172585720 T e macFas5.chr4 169151901 47 - 170955103 T a score=17024.000000 s hg38.chr6_KB021644v2_alt 176029 4 + 185823 GGGT s panTro5.chr6 173639410 4 + 175400573 GGGT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171864882 4 + 173848474 GGGT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11550222 4 - 12463322 GGGT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156381679 4 + 157873769 AGGT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170408572 4 + 172585720 AGGT i rheMac8.chr4 T 121 C 0 s macFas5.chr4 169151854 4 - 170955103 AGGT i macFas5.chr4 T 47 C 0 s macNem1.NW_012011000v1 8437925 4 + 10161646 GGGT i macNem1.NW_012011000v1 C 0 C 0 s chlSab2.chr13 96753765 4 + 98384682 GGGT i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15675727 4 - 23502949 GGGT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169964828 4 + 171630274 GGAT i calJac3.chr4 C 0 C 0 e otoGar3.GL873575 10997265 5995 - 12073884 I e saiBol1.JH378287 1361161 3627 - 2905041 I e aotNan1.NW_018494782v1 1575567 261 - 1813869 T e cebCap1.NW_016107695v1 1329085 146 - 2164891 T e dasNov3.JH569188 662682 121 + 760995 I e canFam3.chr1 56232446 73 + 122678785 I e cerAty1.NW_012002071v1 1469178 4 + 3144229 T e manLeu1.NW_012106474v1 8317373 4585 - 10857215 M a score=10351.000000 s hg38.chr6_KB021644v2_alt 176033 2 + 185823 GT s panTro5.chr6 173639414 2 + 175400573 GT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171864886 2 + 173848474 GT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11550226 2 - 12463322 GT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156381683 2 + 157873769 GT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170408576 2 + 172585720 GT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169151858 2 - 170955103 GT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8437929 2 + 10161646 GT i macNem1.NW_012011000v1 C 0 C 0 s chlSab2.chr13 96753769 2 + 98384682 GT i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15675731 2 - 23502949 GT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169964832 2 + 171630274 GG i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1328939 2 - 2164891 GT i cebCap1.NW_016107695v1 T 146 C 0 e otoGar3.GL873575 10997265 5995 - 12073884 I e saiBol1.JH378287 1361161 3627 - 2905041 I e aotNan1.NW_018494782v1 1575567 261 - 1813869 T e dasNov3.JH569188 662682 121 + 760995 I e canFam3.chr1 56232446 73 + 122678785 I e cerAty1.NW_012002071v1 1469178 4 + 3144229 T e manLeu1.NW_012106474v1 8317373 4585 - 10857215 M a score=251612.000000 s hg38.chr6_KB021644v2_alt 176035 46 + 185823 GCACTCAGCCCTCCTGTGATGGAAGG----TGGT-GGGAACA--CCAGGTACA s panTro5.chr6 173639416 46 + 175400573 GCAGTCAGCCCTCCTGTGATGGAGCA----TGGT-GGGAACA--CCAGGTACA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171864888 46 + 173848474 GCAGTCAGACCTCCTGTGATGGAAGG----TGGT-GGGAACA--CCAGGTACA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11550228 46 - 12463322 GCAGTCAGTCCTCCTGTGATGGAGGG----TGGT-AGGAACA--CCAGGTACA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156381685 47 + 157873769 GCAGTCAGCCCTCCTGTGATGGAGGG----CGGTGGGGAACA--CCTGGTTCA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170408578 46 + 172585720 GCAGTCAGCCCTCCTGTGATGGAAGG----TGGT-GGGAATA--TCAGGTACA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169151860 46 - 170955103 GCAGTCAGCCCTCCTGTGATGGAAGG----TGGT-GGGAATA--TCAGGTACA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8437931 46 + 10161646 GCAGTCAGGCCTCCTGTGATGGAAGG----CGGT-GGGAATA--TCAGGTCCA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1469174 46 + 3144229 GCAGTCAGCCCTCCTGTGATGGAAGG----TGGT-GGGAATA--TCAGGTACA i cerAty1.NW_012002071v1 T 4 C 0 s chlSab2.chr13 96753771 47 + 98384682 GCAGTCAGGCCTCCTGTGATGGAGGG----CGGTGGGGAATA--TCAGGTACA i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15675733 46 - 23502949 GCAGTCAGCCCTCCTGTGATGGAAGG----CCAT-GGTGACA--CTAGGTACA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169964834 52 + 171630274 GCAGTGCCCCTTCCTGTGGCGGAGGGAGGATGGT-GGGAGCAGCCAAGGTGCA i calJac3.chr4 C 0 T 168 s cebCap1.NW_016107695v1 1328941 46 - 2164891 GCAGTCAGCCCTCCTGTGATGGAGGG----TGGT-GGGAACA--CCAGGCACA i cebCap1.NW_016107695v1 C 0 C 0 e otoGar3.GL873575 10997265 5995 - 12073884 I e saiBol1.JH378287 1361161 3627 - 2905041 I e aotNan1.NW_018494782v1 1575567 261 - 1813869 T e dasNov3.JH569188 662682 121 + 760995 I e canFam3.chr1 56232446 73 + 122678785 I e manLeu1.NW_012106474v1 8317373 4585 - 10857215 M a score=78047.000000 s hg38.chr6_KB021644v2_alt 176081 17 + 185823 CGGGGTC--AGGTGT---CCCA s panTro5.chr6 173639462 17 + 175400573 CGGGGTC--AGGTGT---GCAG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171864934 19 + 173848474 CAGGGGCTGGGGTGT---GCAG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11550274 17 - 12463322 CGGGGTC--AGGTGT---GCAG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156381732 19 + 157873769 TGGAGTCTGGGGTGA---GCAG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170408624 20 + 172585720 TGGGGTC--AGGTGTGCAGCAG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169151906 20 - 170955103 TGGGGTC--AGGTGTGCAGCAG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8437977 17 + 10161646 TGGGGTC--AGGTGT---GCAG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1469220 17 + 3144229 CGGGGTC--AGGAGT---GCAG i cerAty1.NW_012002071v1 C 0 T 59 s chlSab2.chr13 96753818 17 + 98384682 CGGGGTC--AGGTGT---GCAG i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15675779 17 - 23502949 TGGGGTC--AGGTGT---GCAG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169964718 17 + 171630274 CAGGGTC--AGGTGC---ACAG i calJac3.chr4 T 168 I 1 s cebCap1.NW_016107695v1 1328987 17 - 2164891 CAGGGTC--AGGTGT---GCAG i cebCap1.NW_016107695v1 C 0 T 59 e otoGar3.GL873575 10997265 5995 - 12073884 I e saiBol1.JH378287 1361161 3627 - 2905041 I e aotNan1.NW_018494782v1 1575567 261 - 1813869 T e dasNov3.JH569188 662682 121 + 760995 I e canFam3.chr1 56232446 73 + 122678785 I e manLeu1.NW_012106474v1 8317373 4585 - 10857215 M a score=158706.000000 s hg38.chr6_KB021644v2_alt 176098 26 + 185823 TCAGCCCTCCTGT----GATGGAAGGTGGT s panTro5.chr6 173639479 26 + 175400573 TCAGCCCTCCTGT----GATGGAAGGTGGT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171864953 26 + 173848474 TCAGCCCTCCTGT----GATGGAAGGTGGT i panPan2.chr6 C 0 T 122 s gorGor5.CYUI01015032v1 11550291 26 - 12463322 TCAGCCCTCCTGT----GATGGAAGGTGGT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156381751 30 + 157873769 TGCCCCTTCCTGTGGTGGATGGAGGATGGT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170408644 26 + 172585720 TCAGGCCTCCTGT----GATGGAAGGCGGT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169151926 26 - 170955103 TCAGGCCTCCTGT----GATGGAAGGCGGT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8437994 26 + 10161646 TCAGCCCTCCTGT----GATGGAAGGCAGT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1469178 26 + 3144229 TCAGCCCTCCTGT----GATGGAAGGTGGT i cerAty1.NW_012002071v1 T 59 C 0 s chlSab2.chr13 96753835 26 + 98384682 TCAGCCCTCCTGT----GATGGAAGGTGGT i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15675796 26 - 23502949 TCAGCCCTCCTGT----GATGGAAGGTGGT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169964736 26 + 171630274 CTAGCCCTCCTGT----GATGGAGGTTGGT i calJac3.chr4 I 1 C 0 s cebCap1.NW_016107695v1 1328945 26 - 2164891 TCAGCCCTCCTGT----GATGGAGGGTGGT i cebCap1.NW_016107695v1 T 59 C 0 e otoGar3.GL873575 10997265 5995 - 12073884 I e saiBol1.JH378287 1361161 3627 - 2905041 I e aotNan1.NW_018494782v1 1575567 261 - 1813869 T e dasNov3.JH569188 662682 121 + 760995 I e canFam3.chr1 56232446 73 + 122678785 I e manLeu1.NW_012106474v1 8317373 4585 - 10857215 M a score=93973.000000 s hg38.chr6_KB021644v2_alt 176124 16 + 185823 GGGAACACC--AGGTACA s panTro5.chr6 173639505 16 + 175400573 GGGAACACC--AGGTACA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171864857 16 + 173848474 GGGAACACC--AGGTACA i panPan2.chr6 T 122 C 0 s gorGor5.CYUI01015032v1 11550317 16 - 12463322 GGGAACAAC--AGGTACA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156381781 18 + 157873769 GGAAACACCCAAGGTGCA i nomLeu3.chr3 C 0 T 341 s rheMac8.chr4 170408670 16 + 172585720 GGGAATATC--AGGTACA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169151952 16 - 170955103 GGGAATATC--AGGTACA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8438020 16 + 10161646 GGGAATATC--AGGTACA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1469204 16 + 3144229 GGGAATATC--AGGTACA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96753861 16 + 98384682 GGGAATATC--AGGTACA i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15675822 16 - 23502949 GGGAATATC--AGGTACA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169964762 16 + 171630274 GGGAACACC--AGACACA i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1328971 16 - 2164891 GGGAACACC--AGGCACA i cebCap1.NW_016107695v1 C 0 C 0 e otoGar3.GL873575 10997265 5995 - 12073884 I e saiBol1.JH378287 1361161 3627 - 2905041 I e aotNan1.NW_018494782v1 1575567 261 - 1813869 T e dasNov3.JH569188 662682 121 + 760995 I e canFam3.chr1 56232446 73 + 122678785 I e manLeu1.NW_012106474v1 8317373 4585 - 10857215 M a score=25872.000000 s hg38.chr6_KB021644v2_alt 176140 5 + 185823 CGGGG s panTro5.chr6 173639521 5 + 175400573 CAGGG i panTro5.chr6 C 0 I 2 s panPan2.chr6 171864873 5 + 173848474 CGGGG i panPan2.chr6 C 0 I 63 s gorGor5.CYUI01015032v1 11550333 5 - 12463322 CGGGG i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170408686 5 + 172585720 TGGGG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169151968 5 - 170955103 TGGGG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8438036 5 + 10161646 TGGGG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1469220 5 + 3144229 CGGGG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96753877 5 + 98384682 CGGGG i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15675838 5 - 23502949 CGGGG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169964778 5 + 171630274 CAGGG i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1328987 5 - 2164891 CAGGG i cebCap1.NW_016107695v1 C 0 C 0 e otoGar3.GL873575 10997265 5995 - 12073884 I e saiBol1.JH378287 1361161 3627 - 2905041 I e aotNan1.NW_018494782v1 1575567 261 - 1813869 T e dasNov3.JH569188 662682 121 + 760995 I e canFam3.chr1 56232446 73 + 122678785 I e nomLeu3.chr3 156381799 341 + 157873769 T e manLeu1.NW_012106474v1 8317373 4585 - 10857215 M a score=25068.000000 s hg38.chr6_KB021644v2_alt 176145 6 + 185823 TCAGGT s panTro5.chr6 173639528 6 + 175400573 TGGGGT i panTro5.chr6 I 2 C 0 s panPan2.chr6 171864941 6 + 173848474 TGGGGT i panPan2.chr6 I 63 C 0 s gorGor5.CYUI01015032v1 11550338 6 - 12463322 TCAGGT i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170408691 6 + 172585720 TCAAGT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169151973 6 - 170955103 TCAAGT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8438041 6 + 10161646 TCAGGT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1469225 6 + 3144229 TCAGGA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96753882 6 + 98384682 TCAGGT i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15675843 6 - 23502949 TCAGGT i colAng1.NW_012114488v1 C 0 T 118 s calJac3.chr4 169964783 6 + 171630274 TCGGGT i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1328992 6 - 2164891 TCAGGT i cebCap1.NW_016107695v1 C 0 T 59 e otoGar3.GL873575 10997265 5995 - 12073884 I e saiBol1.JH378287 1361161 3627 - 2905041 I e aotNan1.NW_018494782v1 1575567 261 - 1813869 T e dasNov3.JH569188 662682 121 + 760995 I e canFam3.chr1 56232446 73 + 122678785 I e nomLeu3.chr3 156381799 341 + 157873769 T e manLeu1.NW_012106474v1 8317373 4585 - 10857215 M a score=25806.000000 s hg38.chr6_KB021644v2_alt 176151 4 + 185823 GTGC s panTro5.chr6 173639534 4 + 175400573 GTGC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171864947 4 + 173848474 GTGC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11550344 4 - 12463322 GTGC i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170408697 4 + 172585720 GTGC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169151979 4 - 170955103 GTGC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8438047 4 + 10161646 GTGC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1469231 4 + 3144229 GTGC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96753888 4 + 98384682 GTGC i chlSab2.chr13 C 0 T 59 s colAng1.NW_012114488v1 15675731 4 - 23502949 GTGC i colAng1.NW_012114488v1 T 118 C 0 s calJac3.chr4 169964789 4 + 171630274 GTGC i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1328939 4 - 2164891 GTGC i cebCap1.NW_016107695v1 T 59 C 0 e otoGar3.GL873575 10997265 5995 - 12073884 I e saiBol1.JH378287 1361161 3627 - 2905041 I e aotNan1.NW_018494782v1 1575567 261 - 1813869 T e dasNov3.JH569188 662682 121 + 760995 I e canFam3.chr1 56232446 73 + 122678785 I e nomLeu3.chr3 156381799 341 + 157873769 T e manLeu1.NW_012106474v1 8317373 4585 - 10857215 M a score=10351.000000 s hg38.chr6_KB021644v2_alt 176155 2 + 185823 CG s panTro5.chr6 173639538 2 + 175400573 AG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171864951 2 + 173848474 AG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11550348 2 - 12463322 AG i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170408701 2 + 172585720 AG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169151983 2 - 170955103 AG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8438051 2 + 10161646 AG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1469235 2 + 3144229 AG i cerAty1.NW_012002071v1 C 0 T 59 s chlSab2.chr13 96753833 2 + 98384682 AG i chlSab2.chr13 T 59 C 0 s colAng1.NW_012114488v1 15675735 2 - 23502949 AG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169964793 2 + 171630274 AG i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1328943 2 - 2164891 AG i cebCap1.NW_016107695v1 C 0 C 0 e otoGar3.GL873575 10997265 5995 - 12073884 I e saiBol1.JH378287 1361161 3627 - 2905041 I e aotNan1.NW_018494782v1 1575567 261 - 1813869 T e dasNov3.JH569188 662682 121 + 760995 I e canFam3.chr1 56232446 73 + 122678785 I e nomLeu3.chr3 156381799 341 + 157873769 T e manLeu1.NW_012106474v1 8317373 4585 - 10857215 M a score=38037.000000 s hg38.chr6_KB021644v2_alt 176157 7 + 185823 TCAGCCC s panTro5.chr6 173639540 7 + 175400573 TCAGCCC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171864953 7 + 173848474 TCAGCCC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11550350 7 - 12463322 TCAGCCC i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170408703 7 + 172585720 TCAGGCC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169151985 7 - 170955103 TCAGGCC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8438053 7 + 10161646 TCAGCCC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1469178 7 + 3144229 TCAGCCC i cerAty1.NW_012002071v1 T 59 C 0 s chlSab2.chr13 96753835 7 + 98384682 TCAGCCC i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15675737 7 - 23502949 TCAGCCC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169964795 7 + 171630274 TGAGCCC i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1328945 7 - 2164891 TCAGCCC i cebCap1.NW_016107695v1 C 0 C 0 e otoGar3.GL873575 10997265 5995 - 12073884 I e saiBol1.JH378287 1361161 3627 - 2905041 I e aotNan1.NW_018494782v1 1575567 261 - 1813869 T e dasNov3.JH569188 662682 121 + 760995 I e canFam3.chr1 56232446 73 + 122678785 I e nomLeu3.chr3 156381799 341 + 157873769 T e manLeu1.NW_012106474v1 8317373 4585 - 10857215 M a score=104367.000000 s hg38.chr6_KB021644v2_alt 176164 17 + 185823 TCCTGTGATGGAAGGTG s panTro5.chr6 173639547 17 + 175400573 TCCTGTGATGGAAGGTG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171864960 17 + 173848474 TCCTGTGATGGAAGGTG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11550357 17 - 12463322 TCCTGTGATGGAGCATG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156381458 17 + 157873769 TCCTGTGATGGAGCATG i nomLeu3.chr3 T 341 C 0 s rheMac8.chr4 170408710 17 + 172585720 TCCTGTGATGGAAGGCG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169151992 17 - 170955103 TCCTGTGATGGAAGGCG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8438060 17 + 10161646 TCCTGTGATGGAGGGCG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1469185 17 + 3144229 TCCTGTGATGGAAGGTG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96753842 17 + 98384682 TCCTGTGATGGAAGGTG i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15675744 17 - 23502949 TCCTGTGATGGAAGGCC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169964802 17 + 171630274 TCCTGTGATGGAGGACA i calJac3.chr4 C 0 T 238 s cebCap1.NW_016107695v1 1328952 17 - 2164891 TCCTGTGATGGAGGGTG i cebCap1.NW_016107695v1 C 0 C 0 e otoGar3.GL873575 10997265 5995 - 12073884 I e saiBol1.JH378287 1361161 3627 - 2905041 I e aotNan1.NW_018494782v1 1575567 261 - 1813869 T e dasNov3.JH569188 662682 121 + 760995 I e canFam3.chr1 56232446 73 + 122678785 I e manLeu1.NW_012106474v1 8317373 4585 - 10857215 M a score=13326.000000 s hg38.chr6_KB021644v2_alt 176181 2 + 185823 GT s panTro5.chr6 173639564 2 + 175400573 GT i panTro5.chr6 C 0 T 156 s panPan2.chr6 171864977 2 + 173848474 GT i panPan2.chr6 C 0 I 1 s gorGor5.CYUI01015032v1 11550374 2 - 12463322 GT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156381475 2 + 157873769 GT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170408727 2 + 172585720 GT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169152009 2 - 170955103 GT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8438077 2 + 10161646 GT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1469202 2 + 3144229 GT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96753859 2 + 98384682 GT i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15675761 2 - 23502949 AT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169964581 2 + 171630274 GT i calJac3.chr4 T 238 C 0 s cebCap1.NW_016107695v1 1328969 2 - 2164891 GT i cebCap1.NW_016107695v1 C 0 C 0 e otoGar3.GL873575 10997265 5995 - 12073884 I e saiBol1.JH378287 1361161 3627 - 2905041 I e aotNan1.NW_018494782v1 1575567 261 - 1813869 T e dasNov3.JH569188 662682 121 + 760995 I e canFam3.chr1 56232446 73 + 122678785 I e manLeu1.NW_012106474v1 8317373 4585 - 10857215 M a score=98737.000000 s hg38.chr6_KB021644v2_alt 176183 21 + 185823 GGGAACACCAGGTACACGGGG s panPan2.chr6 171864980 21 + 173848474 GGGAACACCAGGTACATGGGG i panPan2.chr6 I 1 T 60 s gorGor5.CYUI01015032v1 11550376 21 - 12463322 GGGAACACCAGGTACACGGGG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156381477 21 + 157873769 GGGAGCACCAGGTACACGGGG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170408729 21 + 172585720 GGGAATATCAGGTACATGGGG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169152011 21 - 170955103 GGGAATATCAGGTACATGGGG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8438079 21 + 10161646 GGGGACACCAGGTCCATGGGG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1469204 21 + 3144229 GGGAATATCAGGTACACGGGG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96753861 21 + 98384682 GGGAATATCAGGTACACGGGG i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15675763 21 - 23502949 GGTGACACTAGGTACATGGGG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169964583 21 + 171630274 GGGAACGCCCCGTGTACAGGG i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1328971 21 - 2164891 GGGAACACCAGGCACACAGGG i cebCap1.NW_016107695v1 C 0 C 0 e otoGar3.GL873575 10997265 5995 - 12073884 I e saiBol1.JH378287 1361161 3627 - 2905041 I e aotNan1.NW_018494782v1 1575567 261 - 1813869 T e dasNov3.JH569188 662682 121 + 760995 I e canFam3.chr1 56232446 73 + 122678785 I e manLeu1.NW_012106474v1 8317373 4585 - 10857215 M e panTro5.chr6 173639566 156 + 175400573 T a score=10131.000000 s hg38.chr6_KB021644v2_alt 176204 2 + 185823 TC s panPan2.chr6 171864941 2 + 173848474 TG i panPan2.chr6 T 60 C 0 s gorGor5.CYUI01015032v1 11550397 2 - 12463322 TC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156381498 2 + 157873769 TC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170408750 2 + 172585720 TC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169152032 2 - 170955103 TC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8438100 2 + 10161646 TC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1469225 2 + 3144229 TC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96753882 2 + 98384682 TC i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15675784 2 - 23502949 TC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169964604 2 + 171630274 TC i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1328992 2 - 2164891 TC i cebCap1.NW_016107695v1 C 0 C 0 e otoGar3.GL873575 10997265 5995 - 12073884 I e saiBol1.JH378287 1361161 3627 - 2905041 I e aotNan1.NW_018494782v1 1575567 261 - 1813869 T e dasNov3.JH569188 662682 121 + 760995 I e canFam3.chr1 56232446 73 + 122678785 I e manLeu1.NW_012106474v1 8317373 4585 - 10857215 M e panTro5.chr6 173639566 156 + 175400573 T a score=4423.000000 s hg38.chr6_KB021644v2_alt 176206 1 + 185823 A s panTro5.chr6 173639410 1 + 175400573 G i panTro5.chr6 T 156 C 0 s panPan2.chr6 171864943 1 + 173848474 G i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11550399 1 - 12463322 A i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156381500 1 + 157873769 A i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170408752 1 + 172585720 A i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169152034 1 - 170955103 A i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8438102 1 + 10161646 A i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1469227 1 + 3144229 A i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96753884 1 + 98384682 A i chlSab2.chr13 C 0 T 119 s colAng1.NW_012114488v1 15675786 1 - 23502949 A i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169964606 1 + 171630274 A i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1328994 1 - 2164891 A i cebCap1.NW_016107695v1 C 0 C 0 e otoGar3.GL873575 10997265 5995 - 12073884 I e saiBol1.JH378287 1361161 3627 - 2905041 I e aotNan1.NW_018494782v1 1575567 261 - 1813869 T e dasNov3.JH569188 662682 121 + 760995 I e canFam3.chr1 56232446 73 + 122678785 I e manLeu1.NW_012106474v1 8317373 4585 - 10857215 M a score=20130.000000 s hg38.chr6_KB021644v2_alt 176207 3 + 185823 GGT s panTro5.chr6 173639411 3 + 175400573 GGT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171864944 3 + 173848474 GGT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11550400 3 - 12463322 GGT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156381501 3 + 157873769 GGT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170408753 3 + 172585720 GGT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169152035 3 - 170955103 GGT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8438103 3 + 10161646 GGT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1469228 3 + 3144229 GGA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96753766 3 + 98384682 GGT i chlSab2.chr13 T 119 C 0 s colAng1.NW_012114488v1 15675787 3 - 23502949 GGT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169964607 3 + 171630274 GGT i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1328995 3 - 2164891 GGT i cebCap1.NW_016107695v1 C 0 T 59 e otoGar3.GL873575 10997265 5995 - 12073884 I e saiBol1.JH378287 1361161 3627 - 2905041 I e aotNan1.NW_018494782v1 1575567 261 - 1813869 T e dasNov3.JH569188 662682 121 + 760995 I e canFam3.chr1 56232446 73 + 122678785 I e manLeu1.NW_012106474v1 8317373 4585 - 10857215 M a score=35136.000000 s hg38.chr6_KB021644v2_alt 176210 5 + 185823 GTGCC s panTro5.chr6 173639414 5 + 175400573 GTGCA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171864947 5 + 173848474 GTGCA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11550403 5 - 12463322 GTGCA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156381504 5 + 157873769 GTGCA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170408756 5 + 172585720 GTGCA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169152038 5 - 170955103 GTGCA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8438106 5 + 10161646 GTGCA i macNem1.NW_012011000v1 C 0 T 59 s cerAty1.NW_012002071v1 1469231 5 + 3144229 GTGCA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96753769 5 + 98384682 GTGCA i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15675790 5 - 23502949 GTGCA i colAng1.NW_012114488v1 C 0 T 59 s calJac3.chr4 169964610 5 + 171630274 GTGCA i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1328939 5 - 2164891 GTGCA i cebCap1.NW_016107695v1 T 59 C 0 e otoGar3.GL873575 10997265 5995 - 12073884 I e saiBol1.JH378287 1361161 3627 - 2905041 I e aotNan1.NW_018494782v1 1575567 261 - 1813869 T e dasNov3.JH569188 662682 121 + 760995 I e canFam3.chr1 56232446 73 + 122678785 I e manLeu1.NW_012106474v1 8317373 4585 - 10857215 M a score=7800.000000 s hg38.chr6_KB021644v2_alt 176215 1 + 185823 G s panTro5.chr6 173639419 1 + 175400573 G i panTro5.chr6 C 0 C 0 s panPan2.chr6 171864952 1 + 173848474 G i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11550408 1 - 12463322 G i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156381509 1 + 157873769 G i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170408761 1 + 172585720 G i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169152043 1 - 170955103 G i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8438052 1 + 10161646 G i macNem1.NW_012011000v1 T 59 C 0 s cerAty1.NW_012002071v1 1469236 1 + 3144229 G i cerAty1.NW_012002071v1 C 0 T 59 s chlSab2.chr13 96753774 1 + 98384682 G i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15675736 1 - 23502949 G i colAng1.NW_012114488v1 T 59 C 0 s calJac3.chr4 169964615 1 + 171630274 G i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1328944 1 - 2164891 G i cebCap1.NW_016107695v1 C 0 C 0 e otoGar3.GL873575 10997265 5995 - 12073884 I e saiBol1.JH378287 1361161 3627 - 2905041 I e aotNan1.NW_018494782v1 1575567 261 - 1813869 T e dasNov3.JH569188 662682 121 + 760995 I e canFam3.chr1 56232446 73 + 122678785 I e manLeu1.NW_012106474v1 8317373 4585 - 10857215 M a score=151382.000000 s hg38.chr6_KB021644v2_alt 176216 24 + 185823 TCAGCCCTCCTGTGATGGAAGGTG s panTro5.chr6 173639420 24 + 175400573 TCAGCCCTCCTGTGATGGAGCATG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171864953 24 + 173848474 TCAGCCCTCCTGTGATGGAAGGTG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11550409 24 - 12463322 TCAGCCCTCCTGTGATGGAAGGTG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156381510 24 + 157873769 TCAGCCCTCCTGTGATGGAAGGTG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170408762 24 + 172585720 TCAGGCTTCCTGTGATGGAAGGCG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169152044 24 - 170955103 TCAGGCCTCCTGTGATGGAAGGCG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8438053 24 + 10161646 TCAGCCCTCCTGTGATGGAGGGCG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1469178 24 + 3144229 TCAGCCCTCCTGTGATGGAAGGTG i cerAty1.NW_012002071v1 T 59 C 0 s chlSab2.chr13 96753775 24 + 98384682 TCAGGCCTCCTGTGATGGAGGGCG i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15675737 24 - 23502949 TCAGCCCTCCTGTGATGGAAGGCC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169964616 24 + 171630274 TCAGCCCTCCTGGGACGGAGGGTG i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1328945 24 - 2164891 TCAGCCCTCCTGTGATGGAGGGTG i cebCap1.NW_016107695v1 C 0 C 0 e otoGar3.GL873575 10997265 5995 - 12073884 I e saiBol1.JH378287 1361161 3627 - 2905041 I e aotNan1.NW_018494782v1 1575567 261 - 1813869 T e dasNov3.JH569188 662682 121 + 760995 I e canFam3.chr1 56232446 73 + 122678785 I e manLeu1.NW_012106474v1 8317373 4585 - 10857215 M a score=381873.000000 s hg38.chr6_KB021644v2_alt 176240 54 + 185823 GT-GGGAACACCAGGTACACGGGGTC--AGGTGTGCAGTCAGCCCTCCTGTGATGGA s panTro5.chr6 173639444 54 + 175400573 GT-GGGAACACCAGGTACACGGGGTC--AGGTGTGCAGTCAGCCCTCCTGTGATGGA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171864977 55 + 173848474 GTGGGGAACACCAGGTACATGGGGTC--AGGTGTGCAGTCAGCCCTCCTGTGGTGGA i panPan2.chr6 C 0 T 60 s gorGor5.CYUI01015032v1 11550433 54 - 12463322 GT-GGGAACAACAGGTACACGGGGTC--AGGTGTGCAGTCAGCCCTCCTGTGATGGA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156381534 56 + 157873769 GT-GGGAACACCAGGTACACGGGGTCTGGGGTGTGCAGTCAGCCCTCCTGTGATGGA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170408786 54 + 172585720 GT-GGGAATATCAGGTACACGGGGTC--AGGTGTGCAGTCAGCCCTCCTGTGATGGA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169152068 54 - 170955103 GT-GGGAATATCAGGTACACGGGGTC--AGGTGTGCAGTCAGCCCTCCTGTGATGGA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8438077 54 + 10161646 GT-GGGGACACCAGGTCCATGGGGTC--AGGTGTGCAGTCAGCCCTCCTGTGATGGA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1469202 54 + 3144229 GT-GGGAATATCAGGTACACGGGGTC--AGGAGTGCAGTCAGCCCTCCTGTGATGGA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96753799 55 + 98384682 GTGGGGAATATCAGGTACACGGGGTC--AGGTGTGCAGTCAGCCCTCCTGTGATGGA i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15675761 54 - 23502949 AT-GGTGACACTAGGTACATGGGGTC--AGGTGTGCAGTCAGCCCTCCTGTGATGGA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169964640 55 + 171630274 GT-GGGAAGACCC-GTGCACAGTGTCTGGGGTGTGCAGTCAGCCCTCCTGTGATGGA i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1328969 54 - 2164891 GT-GGGAACACCAGGCACACAGGGTC--AGGTGTGCAGTCAGCCTTCCTGTGATGGA i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1575306 54 - 1813869 GT-GGGAACACCCCGTGTACAGGGTC--AGGTGCACAGTCAGCCCTCCTGTGATGGA i aotNan1.NW_018494782v1 T 261 C 0 e otoGar3.GL873575 10997265 5995 - 12073884 I e saiBol1.JH378287 1361161 3627 - 2905041 I e dasNov3.JH569188 662682 121 + 760995 I e canFam3.chr1 56232446 73 + 122678785 I e manLeu1.NW_012106474v1 8317373 4585 - 10857215 M a score=92478.000000 s hg38.chr6_KB021644v2_alt 176294 15 + 185823 AGGTGGT-GGGAACAC s panTro5.chr6 173639498 15 + 175400573 AGGTGGT-GGGAACAC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171864972 16 + 173848474 AGGTGGTGGGGAACAC i panPan2.chr6 T 60 C 0 s gorGor5.CYUI01015032v1 11550487 15 - 12463322 GCATGGT-GGGAACAC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156381590 15 + 157873769 AGGTGGT-GGGAACAC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170408840 15 + 172585720 AGGTGGT-GGGAATAT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169152122 15 - 170955103 AGGTGGT-GGGAATAT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8438131 15 + 10161646 AGGCGGT-GGGAATAT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1469256 15 + 3144229 GGGCGGT-GGTGACAC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96753854 15 + 98384682 AGGTGGT-GGGAATAT i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15675815 15 - 23502949 AGGTGGT-GGGAATAT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169964695 15 + 171630274 GGACGGT-GAGAACAC i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1329023 15 - 2164891 GGGTGGT-GGGAACAC i cebCap1.NW_016107695v1 C 0 T 93 s aotNan1.NW_018494782v1 1575360 15 - 1813869 GGGTGGT-GGGAACAC i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10997265 5995 - 12073884 I e saiBol1.JH378287 1361161 3627 - 2905041 I e dasNov3.JH569188 662682 121 + 760995 I e canFam3.chr1 56232446 73 + 122678785 I e manLeu1.NW_012106474v1 8317373 4585 - 10857215 M a score=85978.000000 s hg38.chr6_KB021644v2_alt 176309 13 + 185823 CAGGTACACGGGG s panTro5.chr6 173639513 13 + 175400573 CAGGTACACAGGG i panTro5.chr6 C 0 T 116 s panPan2.chr6 171864988 13 + 173848474 CAGGTACATGGGG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11550502 13 - 12463322 CAGGTACACGGGG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156381605 13 + 157873769 CAGGTACATGGGG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170408855 13 + 172585720 CAGGTACATGGGG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169152137 13 - 170955103 CAGGTACATGGGG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8438146 13 + 10161646 CAGGTACATGGGG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1469271 13 + 3144229 CAGGTACATGGGG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96753869 13 + 98384682 CAGGTACACGGGG i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15675830 13 - 23502949 CAGGTACACGGGG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169964710 13 + 171630274 CAGGCACACAGGG i calJac3.chr4 C 0 C 0 s aotNan1.NW_018494782v1 1575375 13 - 1813869 CAGGTACATGGTG i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10997265 5995 - 12073884 I e saiBol1.JH378287 1361161 3627 - 2905041 I e cebCap1.NW_016107695v1 1329038 93 - 2164891 T e dasNov3.JH569188 662682 121 + 760995 I e canFam3.chr1 56232446 73 + 122678785 I e manLeu1.NW_012106474v1 8317373 4585 - 10857215 M a score=12606.000000 s hg38.chr6_KB021644v2_alt 176322 2 + 185823 TC s panPan2.chr6 171865001 2 + 173848474 TC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11550515 2 - 12463322 TC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156381618 2 + 157873769 TC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170408868 2 + 172585720 TC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169152150 2 - 170955103 TC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8438159 2 + 10161646 TC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1469284 2 + 3144229 TC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96753882 2 + 98384682 TC i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15675843 2 - 23502949 TC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169964723 2 + 171630274 TC i calJac3.chr4 C 0 C 0 s aotNan1.NW_018494782v1 1575388 2 - 1813869 TC i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10997265 5995 - 12073884 I e saiBol1.JH378287 1361161 3627 - 2905041 I e cebCap1.NW_016107695v1 1329038 93 - 2164891 T e dasNov3.JH569188 662682 121 + 760995 I e canFam3.chr1 56232446 73 + 122678785 I e manLeu1.NW_012106474v1 8317373 4585 - 10857215 M e panTro5.chr6 173639526 116 + 175400573 T a score=25632.000000 s hg38.chr6_KB021644v2_alt 176324 4 + 185823 AGGT s panTro5.chr6 173639410 4 + 175400573 GGGT i panTro5.chr6 T 116 C 0 s panPan2.chr6 171865003 4 + 173848474 AGGT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11550517 4 - 12463322 AGGT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156381620 4 + 157873769 AGCT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170408870 4 + 172585720 AGGT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169152152 4 - 170955103 AGGT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8438161 4 + 10161646 AGGT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1469286 4 + 3144229 AGGT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96753884 4 + 98384682 AGGT i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15675845 4 - 23502949 AGGT i colAng1.NW_012114488v1 C 0 T 112 s calJac3.chr4 169964725 4 + 171630274 AGGT i calJac3.chr4 C 0 C 0 s aotNan1.NW_018494782v1 1575390 4 - 1813869 AGGT i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10997265 5995 - 12073884 I e saiBol1.JH378287 1361161 3627 - 2905041 I e cebCap1.NW_016107695v1 1329038 93 - 2164891 T e dasNov3.JH569188 662682 121 + 760995 I e canFam3.chr1 56232446 73 + 122678785 I e manLeu1.NW_012106474v1 8317373 4585 - 10857215 M a score=11264.000000 s hg38.chr6_KB021644v2_alt 176328 2 + 185823 GT s panTro5.chr6 173639414 2 + 175400573 GT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171865007 2 + 173848474 GT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11550521 2 - 12463322 GT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156381624 2 + 157873769 GT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170408874 2 + 172585720 GT i rheMac8.chr4 C 0 I 3 s macFas5.chr4 169152156 2 - 170955103 GT i macFas5.chr4 C 0 I 3 s macNem1.NW_012011000v1 8438165 2 + 10161646 GT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1469290 2 + 3144229 GT i cerAty1.NW_012002071v1 C 0 I 58 s chlSab2.chr13 96753888 2 + 98384682 GT i chlSab2.chr13 C 0 T 115 s calJac3.chr4 169964729 2 + 171630274 GC i calJac3.chr4 C 0 C 0 s aotNan1.NW_018494782v1 1575394 2 - 1813869 GT i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10997265 5995 - 12073884 I e saiBol1.JH378287 1361161 3627 - 2905041 I e cebCap1.NW_016107695v1 1329038 93 - 2164891 T e dasNov3.JH569188 662682 121 + 760995 I e colAng1.NW_012114488v1 15675849 112 - 23502949 T e canFam3.chr1 56232446 73 + 122678785 I e manLeu1.NW_012106474v1 8317373 4585 - 10857215 M a score=10369.000000 s hg38.chr6_KB021644v2_alt 176330 4 + 185823 CCCA s panTro5.chr6 173639416 4 + 175400573 GCAG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171865009 4 + 173848474 GCAG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11550523 4 - 12463322 GCAG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156381626 4 + 157873769 GCAG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170408879 4 + 172585720 GCAG i rheMac8.chr4 I 3 C 0 s macFas5.chr4 169152161 4 - 170955103 GCAG i macFas5.chr4 I 3 C 0 s macNem1.NW_012011000v1 8438167 4 + 10161646 GCAG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1469350 4 + 3144229 GCAG i cerAty1.NW_012002071v1 I 58 C 0 s calJac3.chr4 169964731 4 + 171630274 ACAG i calJac3.chr4 C 0 T 59 s aotNan1.NW_018494782v1 1575396 4 - 1813869 GGAC i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10997265 5995 - 12073884 I e saiBol1.JH378287 1361161 3627 - 2905041 I e cebCap1.NW_016107695v1 1329038 93 - 2164891 T e dasNov3.JH569188 662682 121 + 760995 I e colAng1.NW_012114488v1 15675849 112 - 23502949 T e canFam3.chr1 56232446 73 + 122678785 I e chlSab2.chr13 96753890 115 + 98384682 T e manLeu1.NW_012106474v1 8317373 4585 - 10857215 M a score=53062.000000 s hg38.chr6_KB021644v2_alt 176334 7 + 185823 TCAGCCC s panTro5.chr6 173639420 7 + 175400573 TCAGCCC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171865013 7 + 173848474 TCAGCCC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11550527 7 - 12463322 TCAGCCC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156381630 7 + 157873769 TCAGCCC i nomLeu3.chr3 C 0 T 179 s rheMac8.chr4 170408883 7 + 172585720 TCAGGCC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169152165 7 - 170955103 TCAGGCC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8438171 7 + 10161646 TCAGGCC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1469354 7 + 3144229 TCAGCCC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96753775 7 + 98384682 TCAGGCC i chlSab2.chr13 T 115 C 0 s colAng1.NW_012114488v1 15675737 7 - 23502949 TCAGCCC i colAng1.NW_012114488v1 T 112 C 0 s calJac3.chr4 169964676 7 + 171630274 TCAGCCC i calJac3.chr4 T 59 C 0 s cebCap1.NW_016107695v1 1328945 7 - 2164891 TCAGCCC i cebCap1.NW_016107695v1 T 93 C 0 s aotNan1.NW_018494782v1 1575400 7 - 1813869 TCAGCCC i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10997265 5995 - 12073884 I e saiBol1.JH378287 1361161 3627 - 2905041 I e dasNov3.JH569188 662682 121 + 760995 I e canFam3.chr1 56232446 73 + 122678785 I e manLeu1.NW_012106474v1 8317373 4585 - 10857215 M a score=100997.000000 s hg38.chr6_KB021644v2_alt 176341 12 + 185823 TCCTGTGATGGA s panTro5.chr6 173639427 12 + 175400573 TCCTGTGATGGA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171865020 12 + 173848474 TCCTGTGGTGGA i panPan2.chr6 C 0 T 175 s gorGor5.CYUI01015032v1 11550534 12 - 12463322 TCCTGTGATGGA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156381458 12 + 157873769 TCCTGTGATGGA i nomLeu3.chr3 T 179 C 0 s rheMac8.chr4 170408890 12 + 172585720 TCCTGTGATGGA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169152172 12 - 170955103 TCCTGTGATGGA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8438178 12 + 10161646 TCCTATGATGGA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1469361 12 + 3144229 TCCTGTGATGGA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96753782 12 + 98384682 TCCTGTGATGGA i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15675744 12 - 23502949 TCCTGTGATGGA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169964683 12 + 171630274 TCCTGTGATGGA i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1328952 12 - 2164891 TCCTGTGATGGA i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1575407 12 - 1813869 TCCTGTGATGGA i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10997265 5995 - 12073884 I e saiBol1.JH378287 1361161 3627 - 2905041 I e dasNov3.JH569188 662682 121 + 760995 I e canFam3.chr1 56232446 73 + 122678785 I e manLeu1.NW_012106474v1 8317373 4585 - 10857215 M a score=27509.000000 s hg38.chr6_KB021644v2_alt 176353 7 + 185823 AGGTGGT s panTro5.chr6 173639439 7 + 175400573 GCATGGT i panTro5.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11550546 7 - 12463322 AGGTGGT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156381470 7 + 157873769 GCATGGT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170408902 7 + 172585720 AGGCGGT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169152184 7 - 170955103 AGGCGGT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8438190 7 + 10161646 AGGCGGT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1469373 7 + 3144229 GGGCGGT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96753794 7 + 98384682 GGGCGGT i chlSab2.chr13 C 0 I 1 s colAng1.NW_012114488v1 15675756 7 - 23502949 AGGCCAT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169964695 7 + 171630274 GGACGGT i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1328964 7 - 2164891 GGGTGGT i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1575419 7 - 1813869 GGACAGT i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10997265 5995 - 12073884 I e saiBol1.JH378287 1361161 3627 - 2905041 I e dasNov3.JH569188 662682 121 + 760995 I e canFam3.chr1 56232446 73 + 122678785 I e manLeu1.NW_012106474v1 8317373 4585 - 10857215 M e panPan2.chr6 171865032 175 + 173848474 T a score=138903.000000 s hg38.chr6_KB021644v2_alt 176360 21 + 185823 GGGAACACCAGGTACACGGGG s panTro5.chr6 173639446 21 + 175400573 GGGAACACCAGGTACACGGGG i panTro5.chr6 C 0 I 61 s panPan2.chr6 171864857 21 + 173848474 GGGAACACCAGGTACACGGGG i panPan2.chr6 T 175 I 4 s gorGor5.CYUI01015032v1 11550553 21 - 12463322 GGGAACAACAGGCACACGGGG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156381477 21 + 157873769 GGGAGCACCAGGTACACGGGG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170408909 21 + 172585720 GGGAATATCAGGTACATGGGG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169152191 21 - 170955103 GGGAATATCAGGTACATGGGG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8438197 21 + 10161646 GGGAATATCAGGTACATGGGG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1469380 21 + 3144229 GGTGACAACAGGTACATGGGG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96753802 21 + 98384682 GGGAATATCAGGTACACGGGG i chlSab2.chr13 I 1 C 0 s colAng1.NW_012114488v1 15675763 21 - 23502949 GGTGACACTAGGTACATGGGG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169964702 21 + 171630274 GAGAACACCAGGCACACAGGG i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1328971 21 - 2164891 GGGAACACCAGGCACACAGGG i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1575426 21 - 1813869 GGGAAAACCAGGTACATGGTG i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10997265 5995 - 12073884 I e saiBol1.JH378287 1361161 3627 - 2905041 I e dasNov3.JH569188 662682 121 + 760995 I e canFam3.chr1 56232446 73 + 122678785 I e manLeu1.NW_012106474v1 8317373 4585 - 10857215 M a score=12198.000000 s hg38.chr6_KB021644v2_alt 176381 2 + 185823 TC s panTro5.chr6 173639528 2 + 175400573 TG i panTro5.chr6 I 61 T 120 s gorGor5.CYUI01015032v1 11550574 2 - 12463322 TC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156381498 2 + 157873769 TC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170408930 2 + 172585720 TC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169152212 2 - 170955103 TC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8438218 2 + 10161646 TC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1469401 2 + 3144229 TC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96753823 2 + 98384682 TC i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15675784 2 - 23502949 TC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169964723 2 + 171630274 TC i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1328992 2 - 2164891 TC i cebCap1.NW_016107695v1 C 0 I 61 s aotNan1.NW_018494782v1 1575447 2 - 1813869 TC i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10997265 5995 - 12073884 I e saiBol1.JH378287 1361161 3627 - 2905041 I e dasNov3.JH569188 662682 121 + 760995 I e canFam3.chr1 56232446 73 + 122678785 I e manLeu1.NW_012106474v1 8317373 4585 - 10857215 M e panPan2.chr6 171864878 4 + 173848474 I a score=4282.000000 s hg38.chr6_KB021644v2_alt 176383 1 + 185823 A s panTro5.chr6 173639410 1 + 175400573 G i panTro5.chr6 T 120 C 0 s panPan2.chr6 171864882 1 + 173848474 G i panPan2.chr6 I 4 C 0 s gorGor5.CYUI01015032v1 11550576 1 - 12463322 A i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156381500 1 + 157873769 A i nomLeu3.chr3 C 0 I 61 s rheMac8.chr4 170408932 1 + 172585720 A i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169152214 1 - 170955103 A i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8438220 1 + 10161646 A i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1469403 1 + 3144229 A i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96753825 1 + 98384682 A i chlSab2.chr13 C 0 T 60 s colAng1.NW_012114488v1 15675786 1 - 23502949 A i colAng1.NW_012114488v1 C 0 T 59 s calJac3.chr4 169964725 1 + 171630274 A i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1329055 1 - 2164891 G i cebCap1.NW_016107695v1 I 61 C 0 s aotNan1.NW_018494782v1 1575449 1 - 1813869 A i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10997265 5995 - 12073884 I e saiBol1.JH378287 1361161 3627 - 2905041 I e dasNov3.JH569188 662682 121 + 760995 I e canFam3.chr1 56232446 73 + 122678785 I e manLeu1.NW_012106474v1 8317373 4585 - 10857215 M a score=23328.000000 s hg38.chr6_KB021644v2_alt 176384 3 + 185823 GGT s panTro5.chr6 173639411 3 + 175400573 GGT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171864883 3 + 173848474 GGT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11550577 3 - 12463322 GGT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156381562 3 + 157873769 GGT i nomLeu3.chr3 I 61 C 0 s rheMac8.chr4 170408933 3 + 172585720 AGT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169152215 3 - 170955103 AGT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8438221 3 + 10161646 GGT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1469404 3 + 3144229 GGT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96753766 3 + 98384682 GGT i chlSab2.chr13 T 60 C 0 s colAng1.NW_012114488v1 15675728 3 - 23502949 GGT i colAng1.NW_012114488v1 T 59 C 0 s calJac3.chr4 169964726 3 + 171630274 GGT i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1329056 3 - 2164891 GGT i cebCap1.NW_016107695v1 C 0 T 120 s aotNan1.NW_018494782v1 1575450 3 - 1813869 GGT i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10997265 5995 - 12073884 I e saiBol1.JH378287 1361161 3627 - 2905041 I e dasNov3.JH569188 662682 121 + 760995 I e canFam3.chr1 56232446 73 + 122678785 I e manLeu1.NW_012106474v1 8317373 4585 - 10857215 M a score=20409.000000 s hg38.chr6_KB021644v2_alt 176387 3 + 185823 GTG s panTro5.chr6 173639414 3 + 175400573 GTG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171864886 3 + 173848474 GTG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11550580 3 - 12463322 GTG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156381565 3 + 157873769 GTG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170408936 3 + 172585720 GTG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169152218 3 - 170955103 GTG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8438224 3 + 10161646 GTG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1469407 3 + 3144229 GTG i cerAty1.NW_012002071v1 C 0 T 118 s chlSab2.chr13 96753769 3 + 98384682 GTG i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15675731 3 - 23502949 GTG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169964729 3 + 171630274 GCA i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1328939 3 - 2164891 GTG i cebCap1.NW_016107695v1 T 120 C 0 s aotNan1.NW_018494782v1 1575453 3 - 1813869 GCA i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10997265 5995 - 12073884 I e saiBol1.JH378287 1361161 3627 - 2905041 I e dasNov3.JH569188 662682 121 + 760995 I e canFam3.chr1 56232446 73 + 122678785 I e manLeu1.NW_012106474v1 8317373 4585 - 10857215 M a score=366939.000000 s hg38.chr6_KB021644v2_alt 176390 53 + 185823 CAGTC-AGCCCTCCTGTGATGGAAGGTGGT-GGGAACACCAGGTACACGGGGTCA s panTro5.chr6 173639417 53 + 175400573 CAGTC-AGCCCTCCTGTGATGGAGCATGGT-GGGAACACCAGGTACACGGGGTCA i panTro5.chr6 C 0 T 59 s panPan2.chr6 171864889 53 + 173848474 CAGTC-AGACCTCCTGTGATGGAAGGTGGT-GGGAACACCAGGTACACAGGGGCT i panPan2.chr6 C 0 I 2 s gorGor5.CYUI01015032v1 11550583 53 - 12463322 CAGTC-AGCCCTCCTGTGATGGAGCATGGT-GGGAACACCAGGTACACGGGGTCA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156381568 53 + 157873769 CAGTC-AGCCCTCCTGTGATGGAAGGTGGT-GGGAACACCAGGTACATGGGGTCA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170408939 53 + 172585720 CAGTC-AGGCCTCCTGTGATGGAAGGCGGT-GGGAATATCAGGTACATGGGGTCA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169152221 53 - 170955103 CAGTC-AGGCCTCCTGTGATGGAAGGCGGT-GGGAATATCAGGTACATGGGGTCA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8438227 53 + 10161646 CAGTC-AGCCCTCCTGTGATGGAAGGCGGT-GGTGACACCAGGTACATGGGGTCA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1469292 53 + 3144229 CAGTC-AGCCCTCCTGTGATGGAAGGTGGT-GGGAATATCAGGTACACGGGGTCA i cerAty1.NW_012002071v1 T 118 C 0 s chlSab2.chr13 96753772 54 + 98384682 CAGTC-AGGCCTCCTGTGATGGAGGGCGGTGGGGAATATCAGGTACACGGGGTCA i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15675734 53 - 23502949 CAGTC-AGCCCTCCTGTGATGGAAGGCCAT-GGTGACACTAGGTACATGGGGTCA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169964732 54 + 171630274 CAGTCTAGCCCTCCTGTGATGGAGGTTGGT-GGGAACACCAGACACACAGGGTCG i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1328942 53 - 2164891 CAGTC-AGCCCTCCTGTGATGGAGGGTGGT-GGGAACACCAGGCACACAGGGTCA i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1575456 53 - 1813869 TAGTC-AGCCCTCCTGTGATGGAGGATGGT-GAGAACACCAGGTACATAGTGTCA i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10997265 5995 - 12073884 I e saiBol1.JH378287 1361161 3627 - 2905041 I e dasNov3.JH569188 662682 121 + 760995 I e canFam3.chr1 56232446 73 + 122678785 I e manLeu1.NW_012106474v1 8317373 4585 - 10857215 M a score=20774.000000 s hg38.chr6_KB021644v2_alt 176443 3 + 185823 GGT s panTro5.chr6 173639411 3 + 175400573 GGT i panTro5.chr6 T 59 C 0 s panPan2.chr6 171864944 3 + 173848474 GGT i panPan2.chr6 I 2 C 0 s gorGor5.CYUI01015032v1 11550636 3 - 12463322 GGT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156381621 3 + 157873769 GCT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170408992 3 + 172585720 GGT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169152274 3 - 170955103 GGT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8438280 3 + 10161646 GGT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1469345 3 + 3144229 GGA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96753826 3 + 98384682 GGT i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15675787 3 - 23502949 GGT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169964786 3 + 171630274 GGT i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1328995 3 - 2164891 GGT i cebCap1.NW_016107695v1 C 0 T 59 s aotNan1.NW_018494782v1 1575509 3 - 1813869 GGT i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10997265 5995 - 12073884 I e saiBol1.JH378287 1361161 3627 - 2905041 I e dasNov3.JH569188 662682 121 + 760995 I e canFam3.chr1 56232446 73 + 122678785 I e manLeu1.NW_012106474v1 8317373 4585 - 10857215 M a score=246274.000000 s hg38.chr6_KB021644v2_alt 176446 32 + 185823 GTGCAGTCAGCCCTCCTGTGATGGAAGGTGGT s panTro5.chr6 173639414 32 + 175400573 GTGCAGTCAGCCCTCCTGTGATGGAGCATGGT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171864947 32 + 173848474 GTGCAGTCAGCCCTCCTGTGATGGAAGGTGGT i panPan2.chr6 C 0 I 1 s gorGor5.CYUI01015032v1 11550639 32 - 12463322 GTGCAGTCAGCTCTCCTGTGATGGAAGGTGGT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156381624 32 + 157873769 GTGCAGTCAGCCCTCCTGTGATGGAGGGCGGT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170408995 32 + 172585720 GTGCAGTCAGCCCTCCTGTGATGGAAGGTGGT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169152277 32 - 170955103 GTGCAGTCAGCCCTCCTGTGATGGAAGGTGGT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8438283 32 + 10161646 GTGCAGTCAGGCCTCCTATGATGGAAGGCGGT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1469348 32 + 3144229 GTGCAGTCAGCCCTCCTGTGATGGAGGGCGGT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96753829 32 + 98384682 GTGCAGTCAGCCCTCCTGTGATGGAAGGTGGT i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15675790 32 - 23502949 GTGCAGTCAGCCCTCCTGTGATGGAAGGTGGT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169964789 32 + 171630274 GTGCAGTGAGCCCTCCTGTGATGGAGGACAGT i calJac3.chr4 C 0 T 103 s cebCap1.NW_016107695v1 1328939 32 - 2164891 GTGCAGTCAGCCCTCCTGTGATGGAGGGTGGT i cebCap1.NW_016107695v1 T 59 C 0 s aotNan1.NW_018494782v1 1575512 32 - 1813869 ACACAGTCAACCCTCCTGTGATGGAGGGTGGT i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10997265 5995 - 12073884 I e saiBol1.JH378287 1361161 3627 - 2905041 I e dasNov3.JH569188 662682 121 + 760995 I e canFam3.chr1 56232446 73 + 122678785 I e manLeu1.NW_012106474v1 8317373 4585 - 10857215 M a score=99204.000000 s hg38.chr6_KB021644v2_alt 176478 16 + 185823 GGGAACACCAGGTACA s panTro5.chr6 173639446 16 + 175400573 GGGAACACCAGGTACA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171864980 16 + 173848474 GGGAACACCAGGTACA i panPan2.chr6 I 1 C 0 s gorGor5.CYUI01015032v1 11550671 16 - 12463322 GGGAACACCAGGTACA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156381656 16 + 157873769 GGGATCACCAGGTACA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170409027 16 + 172585720 GGGAATATCAGGTACA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169152309 16 - 170955103 GGGAATATCAGGTACA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8438315 16 + 10161646 GGGAATATCAGGTACA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1469380 16 + 3144229 GGTGACAACAGGTACA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96753861 16 + 98384682 GGGAATATCAGGTACA i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15675822 16 - 23502949 GGGAATATCAGGTACA i colAng1.NW_012114488v1 C 0 C 0 s cebCap1.NW_016107695v1 1328971 16 - 2164891 GGGAACACCAGGCACA i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1575544 16 - 1813869 GGGAACACCAGGTACA i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10997265 5995 - 12073884 I e saiBol1.JH378287 1361161 3627 - 2905041 I e calJac3.chr4 169964821 103 + 171630274 T e dasNov3.JH569188 662682 121 + 760995 I e canFam3.chr1 56232446 73 + 122678785 I e manLeu1.NW_012106474v1 8317373 4585 - 10857215 M a score=3115.000000 s hg38.chr6_KB021644v2_alt 176494 1 + 185823 C s panTro5.chr6 173639462 1 + 175400573 C i panTro5.chr6 C 0 C 0 s panPan2.chr6 171864996 1 + 173848474 T i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11550687 1 - 12463322 C i gorGor5.CYUI01015032v1 C 0 I 480 s nomLeu3.chr3 156381672 1 + 157873769 C i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170409043 1 + 172585720 T i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169152325 1 - 170955103 T i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8438331 1 + 10161646 C i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1469396 1 + 3144229 T i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96753877 1 + 98384682 C i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15675838 1 - 23502949 C i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169964718 1 + 171630274 C i calJac3.chr4 T 103 C 0 s cebCap1.NW_016107695v1 1328987 1 - 2164891 C i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1575560 1 - 1813869 T i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10997265 5995 - 12073884 I e saiBol1.JH378287 1361161 3627 - 2905041 I e dasNov3.JH569188 662682 121 + 760995 I e canFam3.chr1 56232446 73 + 122678785 I e manLeu1.NW_012106474v1 8317373 4585 - 10857215 M a score=53227.000000 s hg38.chr6_KB021644v2_alt 176495 7 + 185823 GGGGTCA s panTro5.chr6 173639463 7 + 175400573 GGGGTCA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171864997 7 + 173848474 GGGGTCA i panPan2.chr6 C 0 T 121 s gorGor5.CYUI01015032v1 11551168 7 - 12463322 GGGGTCA i gorGor5.CYUI01015032v1 I 480 I 61 s nomLeu3.chr3 156381673 7 + 157873769 AGGGTCA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170409044 7 + 172585720 GGGGTCA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169152326 7 - 170955103 GGGGTCA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8438332 7 + 10161646 GGGATCA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1469397 7 + 3144229 GGGGTCA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96753878 7 + 98384682 GGGGTCA i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15675839 7 - 23502949 GGGGTCA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169964719 7 + 171630274 AGGGTCA i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1328988 7 - 2164891 AGGGTCA i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1575561 7 - 1813869 GGTGTCA i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10997265 5995 - 12073884 I e saiBol1.JH378287 1361161 3627 - 2905041 I e dasNov3.JH569188 662682 121 + 760995 I e canFam3.chr1 56232446 73 + 122678785 I e manLeu1.NW_012106474v1 8317373 4585 - 10857215 M a score=70175.000000 s hg38.chr6_KB021644v2_alt 176502 10 + 185823 GGTGTGCAGT s panTro5.chr6 173639470 10 + 175400573 GGTGTGCAGT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171864883 10 + 173848474 GGTGTGCAGT i panPan2.chr6 T 121 C 0 s gorGor5.CYUI01015032v1 11551236 10 - 12463322 GGTGTGCACT i gorGor5.CYUI01015032v1 I 61 C 0 s nomLeu3.chr3 156381680 10 + 157873769 GGTGTGCAGT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170409051 10 + 172585720 AGTGTGCAGT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169152333 10 - 170955103 AGTGTGCAGT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8438339 10 + 10161646 GGTGTGCAGT i macNem1.NW_012011000v1 C 0 T 118 s cerAty1.NW_012002071v1 1469404 10 + 3144229 GGTGTGCAGT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96753885 10 + 98384682 GGTGTGCAGT i chlSab2.chr13 C 0 T 59 s colAng1.NW_012114488v1 15675846 10 - 23502949 GGTTTGCAGT i colAng1.NW_012114488v1 C 0 T 59 s calJac3.chr4 169964726 10 + 171630274 GGTGCACAGT i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1328995 10 - 2164891 GGTGTGCAGT i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1575568 10 - 1813869 GGTGTGGACT i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10997265 5995 - 12073884 I e saiBol1.JH378287 1361161 3627 - 2905041 I e dasNov3.JH569188 662682 121 + 760995 I e canFam3.chr1 56232446 73 + 122678785 I e manLeu1.NW_012106474v1 8317373 4585 - 10857215 M a score=278160.000000 s hg38.chr6_KB021644v2_alt 176512 39 + 185823 C-AGCTCTCCTGTGATGGAAGGTGGT-GGGAACACCAGGTA s panTro5.chr6 173639480 39 + 175400573 C-AGCCCTCCTGTGATGGAAGGTGGT-GGGAACACCAGGTA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171864893 39 + 173848474 C-AGACCTCCTGTGATGGAAGGTGGT-GGGAACACCAGGTA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11551246 39 - 12463322 C-AGCCCTCCTGTGATGGAAGGTGGT-GGGAACACCAGGTA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156381690 40 + 157873769 C-AGCCCTCCTGTGATGGAGGGCGGTGGGGAACACCTGGTT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170409061 39 + 172585720 C-AGCCCTCCTGTGATGGAAGGTGGT-GGGAATATCAGGTA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169152343 39 - 170955103 C-AGGCCTCCTGTGATGGAAGGTGGT-GGGAATATCAGGTA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8438231 39 + 10161646 C-AGCCCTCCTGTGATGGAAGGCGGT-GGTGACACCAGGTA i macNem1.NW_012011000v1 T 118 C 0 s cerAty1.NW_012002071v1 1469414 39 + 3144229 C-AGCCCTCCTGTGATGGAAGGCGGT-GGGAATATCAGGTA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96753836 39 + 98384682 C-AGCCCTCCTGTGATGGAAGGTGGT-GGGAATATCAGGTA i chlSab2.chr13 T 59 C 0 s colAng1.NW_012114488v1 15675797 39 - 23502949 C-AGCCCTCCTGTGATGGAAGGTGGT-GGGAATATCAGGTA i colAng1.NW_012114488v1 T 59 C 0 s calJac3.chr4 169964736 40 + 171630274 CTAGCCCTCCTGTGATGGAGGTTGGT-GGGAACACCAGACA i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1329005 39 - 2164891 C-AGCCTTCCTGTGATGGAGGGTGGT-GGGAACACTCTGTA i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1575578 39 - 1813869 C-AGCCCTCCTGTGATGGAGGGTGGT-GGGAACACCAGGTA i aotNan1.NW_018494782v1 C 0 M 1960 e otoGar3.GL873575 10997265 5995 - 12073884 I e saiBol1.JH378287 1361161 3627 - 2905041 I e dasNov3.JH569188 662682 121 + 760995 I e canFam3.chr1 56232446 73 + 122678785 I e manLeu1.NW_012106474v1 8317373 4585 - 10857215 M a score=19838.000000 s hg38.chr6_KB021644v2_alt 176551 4 + 185823 CACG s panTro5.chr6 173639519 4 + 175400573 CACA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171864932 4 + 173848474 CACA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11551285 4 - 12463322 CACA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156381730 4 + 157873769 CATG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170409100 4 + 172585720 CATG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169152382 4 - 170955103 CATG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8438270 4 + 10161646 CATG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1469453 4 + 3144229 CATG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96753875 4 + 98384682 CACG i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15675836 4 - 23502949 CACG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169964776 4 + 171630274 CACA i calJac3.chr4 C 0 I 41 s cebCap1.NW_016107695v1 1329044 4 - 2164891 CACA i cebCap1.NW_016107695v1 C 0 C 0 e otoGar3.GL873575 10997265 5995 - 12073884 I e saiBol1.JH378287 1361161 3627 - 2905041 I e aotNan1.NW_018494782v1 1575617 1960 - 1813869 M e dasNov3.JH569188 662682 121 + 760995 I e canFam3.chr1 56232446 73 + 122678785 I e manLeu1.NW_012106474v1 8317373 4585 - 10857215 M a score=27752.000000 s hg38.chr6_KB021644v2_alt 176555 5 + 185823 GGGTC s panTro5.chr6 173639523 5 + 175400573 GGGGC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171864936 5 + 173848474 GGGGC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11551289 5 - 12463322 GGGTC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156381734 5 + 157873769 GAGTC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170409104 5 + 172585720 GGGTC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169152386 5 - 170955103 GGGTC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8438274 5 + 10161646 GGGTC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1469457 5 + 3144229 GGGTC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96753879 5 + 98384682 GGGTC i chlSab2.chr13 C 0 T 59 s colAng1.NW_012114488v1 15675840 5 - 23502949 GGGTC i colAng1.NW_012114488v1 C 0 I 11 s calJac3.chr4 169964821 5 + 171630274 GTGTC i calJac3.chr4 I 41 C 0 s cebCap1.NW_016107695v1 1329048 5 - 2164891 GTGTC i cebCap1.NW_016107695v1 C 0 C 0 e otoGar3.GL873575 10997265 5995 - 12073884 I e saiBol1.JH378287 1361161 3627 - 2905041 I e aotNan1.NW_018494782v1 1575617 1960 - 1813869 M e dasNov3.JH569188 662682 121 + 760995 I e canFam3.chr1 56232446 73 + 122678785 I e manLeu1.NW_012106474v1 8317373 4585 - 10857215 M a score=4011.000000 s hg38.chr6_KB021644v2_alt 176560 2 + 185823 TG s panTro5.chr6 173639528 2 + 175400573 TG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171864941 2 + 173848474 TG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11551294 2 - 12463322 TG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156381739 2 + 157873769 TG i nomLeu3.chr3 C 0 C 0 s calJac3.chr4 169964826 2 + 171630274 TG i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1329053 2 - 2164891 TG i cebCap1.NW_016107695v1 C 0 C 0 e otoGar3.GL873575 10997265 5995 - 12073884 I e saiBol1.JH378287 1361161 3627 - 2905041 I e aotNan1.NW_018494782v1 1575617 1960 - 1813869 M e dasNov3.JH569188 662682 121 + 760995 I e colAng1.NW_012114488v1 15675845 11 - 23502949 I e canFam3.chr1 56232446 73 + 122678785 I e chlSab2.chr13 96753884 59 + 98384682 T e cerAty1.NW_012002071v1 1469462 0 + 3144229 C e manLeu1.NW_012106474v1 8317373 4585 - 10857215 M e macNem1.NW_012011000v1 8438279 0 + 10161646 C e rheMac8.chr4 170409109 0 + 172585720 C e macFas5.chr4 169152391 0 - 170955103 C a score=1925.000000 s hg38.chr6_KB021644v2_alt 176562 1 + 185823 G s panTro5.chr6 173639530 1 + 175400573 G i panTro5.chr6 C 0 C 0 s panPan2.chr6 171864943 1 + 173848474 G i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11551296 1 - 12463322 G i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156381741 1 + 157873769 G i nomLeu3.chr3 C 0 T 62 s rheMac8.chr4 170409109 1 + 172585720 A i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169152391 1 - 170955103 A i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8438279 1 + 10161646 A i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1469462 1 + 3144229 A i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96753825 1 + 98384682 A i chlSab2.chr13 T 59 C 0 s calJac3.chr4 169964828 1 + 171630274 G i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1329055 1 - 2164891 G i cebCap1.NW_016107695v1 C 0 C 0 e otoGar3.GL873575 10997265 5995 - 12073884 I e saiBol1.JH378287 1361161 3627 - 2905041 I e aotNan1.NW_018494782v1 1575617 1960 - 1813869 M e dasNov3.JH569188 662682 121 + 760995 I e colAng1.NW_012114488v1 15675845 11 - 23502949 I e canFam3.chr1 56232446 73 + 122678785 I e manLeu1.NW_012106474v1 8317373 4585 - 10857215 M a score=155834.000000 s hg38.chr6_KB021644v2_alt 176563 29 + 185823 GGTGTGCAGTCAGCCCTCCTGTGATGGAA s panTro5.chr6 173639531 29 + 175400573 GGTGTGCAGTCAGCCCTCCTGTGATGGAA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171864944 29 + 173848474 GGTGTGCAGTCAGCCCTCCTGTGATGGAA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11551297 29 - 12463322 GGTGTGCAGTCAGCCCTCCTGTGATGGAA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156381680 29 + 157873769 GGTGTGCAGTCAGCCCTCCTGTGATGGAG i nomLeu3.chr3 T 62 C 0 s rheMac8.chr4 170409110 29 + 172585720 GGTGTGCAGTCAGGCTTCCTGTGATGGAA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169152392 29 - 170955103 GGTGTGCAGTCAGGCCTCCTGTGATGGAA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8438280 29 + 10161646 GGTGTGCAGTCAGGCCTCCTATGATGGAA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1469463 29 + 3144229 GGTGTGCAGTCAGCCCTCCTGTGATGGAA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96753826 29 + 98384682 GGTGTGCAGTCAGCCCTCCTGTGATGGAA i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169964829 29 + 171630274 GATGGGCAGTGCCCCTTCCTGTGGCGGAG i calJac3.chr4 C 0 T 95 s cebCap1.NW_016107695v1 1329056 29 - 2164891 GGTGTGTAGTCAGCCCTCCTGTGATGGAG i cebCap1.NW_016107695v1 C 0 C 0 e otoGar3.GL873575 10997265 5995 - 12073884 I e saiBol1.JH378287 1361161 3627 - 2905041 I e aotNan1.NW_018494782v1 1575617 1960 - 1813869 M e dasNov3.JH569188 662682 121 + 760995 I e colAng1.NW_012114488v1 15675845 11 - 23502949 I e canFam3.chr1 56232446 73 + 122678785 I e manLeu1.NW_012106474v1 8317373 4585 - 10857215 M a score=32630.000000 s hg38.chr6_KB021644v2_alt 176592 7 + 185823 GGTGGTG s panTro5.chr6 173639560 7 + 175400573 GGTGGTG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171864973 7 + 173848474 GGTGGTG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11551326 7 - 12463322 GGTGGTG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156381709 7 + 157873769 GGCGGTG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170409139 7 + 172585720 GGCGGTG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169152421 7 - 170955103 GGCGGTG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8438309 7 + 10161646 GGCGGTG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1469492 7 + 3144229 GGTGGTG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96753855 7 + 98384682 GGTGGTG i chlSab2.chr13 C 0 C 0 s cebCap1.NW_016107695v1 1329085 7 - 2164891 GACGGTG i cebCap1.NW_016107695v1 C 0 C 0 e otoGar3.GL873575 10997265 5995 - 12073884 I e saiBol1.JH378287 1361161 3627 - 2905041 I e aotNan1.NW_018494782v1 1575617 1960 - 1813869 M e calJac3.chr4 169964858 95 + 171630274 T e dasNov3.JH569188 662682 121 + 760995 I e colAng1.NW_012114488v1 15675845 11 - 23502949 I e canFam3.chr1 56232446 73 + 122678785 I e manLeu1.NW_012106474v1 8317373 4585 - 10857215 M a score=45704.000000 s hg38.chr6_KB021644v2_alt 176599 14 + 185823 GG-AACACCAGGTGC s panTro5.chr6 173639567 15 + 175400573 GGGAACACCAGGTAC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171864980 15 + 173848474 GGGAACACCAGGTAC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11551333 14 - 12463322 GG-AACACCAGGTGC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156381716 15 + 157873769 GGGAACACCTGGTTC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170409146 14 + 172585720 GG-AATATCAGGTAC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169152428 14 - 170955103 GG-AATATCAGGTAC i macFas5.chr4 C 0 I 1 s macNem1.NW_012011000v1 8438316 14 + 10161646 GG-AATATCAGGTAC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1469499 14 + 3144229 GG-AATATCAGGTCC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96753862 14 + 98384682 GG-AATATCAGGTAC i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169964763 14 + 171630274 GG-AACACCAGACAC i calJac3.chr4 T 95 C 0 e otoGar3.GL873575 10997265 5995 - 12073884 I e saiBol1.JH378287 1361161 3627 - 2905041 I e aotNan1.NW_018494782v1 1575617 1960 - 1813869 M e cebCap1.NW_016107695v1 1329092 0 - 2164891 C e dasNov3.JH569188 662682 121 + 760995 I e colAng1.NW_012114488v1 15675845 11 - 23502949 I e canFam3.chr1 56232446 73 + 122678785 I e manLeu1.NW_012106474v1 8317373 4585 - 10857215 M a score=4095.000000 s hg38.chr6_KB021644v2_alt 176613 1 + 185823 A s panTro5.chr6 173639582 1 + 175400573 A i panTro5.chr6 C 0 C 0 s panPan2.chr6 171864995 1 + 173848474 A i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11551347 1 - 12463322 A i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156381731 1 + 157873769 A i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170409160 1 + 172585720 A i rheMac8.chr4 C 0 C 0 s macNem1.NW_012011000v1 8438330 1 + 10161646 A i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1469513 1 + 3144229 A i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96753876 1 + 98384682 A i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169964777 1 + 171630274 A i calJac3.chr4 C 0 C 0 e otoGar3.GL873575 10997265 5995 - 12073884 I e saiBol1.JH378287 1361161 3627 - 2905041 I e aotNan1.NW_018494782v1 1575617 1960 - 1813869 M e cebCap1.NW_016107695v1 1329092 0 - 2164891 C e dasNov3.JH569188 662682 121 + 760995 I e colAng1.NW_012114488v1 15675845 11 - 23502949 I e canFam3.chr1 56232446 73 + 122678785 I e manLeu1.NW_012106474v1 8317373 4585 - 10857215 M e macFas5.chr4 169152442 1 - 170955103 I a score=25914.000000 s hg38.chr6_KB021644v2_alt 176614 7 + 185823 CGGGGTC s panTro5.chr6 173639583 7 + 175400573 TGGGGTC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171864996 7 + 173848474 TGGGGTC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11551348 7 - 12463322 TGGGGTC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156381732 7 + 157873769 TGGAGTC i nomLeu3.chr3 C 0 I 3 s rheMac8.chr4 170409161 7 + 172585720 CGGGGTC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169152443 7 - 170955103 CGGGGTC i macFas5.chr4 I 1 C 0 s macNem1.NW_012011000v1 8438331 7 + 10161646 CGGGATC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1469514 7 + 3144229 CAGGGTC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96753877 7 + 98384682 CGGGGTC i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169964778 7 + 171630274 CAGGGTC i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1329092 6 - 2164891 -TGTCTA i cebCap1.NW_016107695v1 C 0 C 0 e otoGar3.GL873575 10997265 5995 - 12073884 I e saiBol1.JH378287 1361161 3627 - 2905041 I e aotNan1.NW_018494782v1 1575617 1960 - 1813869 M e dasNov3.JH569188 662682 121 + 760995 I e colAng1.NW_012114488v1 15675845 11 - 23502949 I e canFam3.chr1 56232446 73 + 122678785 I e manLeu1.NW_012106474v1 8317373 4585 - 10857215 M a score=3575.000000 s hg38.chr6_KB021644v2_alt 176621 1 + 185823 A s panTro5.chr6 173639590 1 + 175400573 A i panTro5.chr6 C 0 C 0 s panPan2.chr6 171865003 1 + 173848474 A i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11551355 1 - 12463322 A i gorGor5.CYUI01015032v1 C 0 C 0 s rheMac8.chr4 170409168 1 + 172585720 A i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169152450 1 - 170955103 A i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8438338 1 + 10161646 A i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1469521 1 + 3144229 A i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96753884 1 + 98384682 A i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169964785 1 + 171630274 G i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1329098 1 - 2164891 G i cebCap1.NW_016107695v1 C 0 C 0 s canFam3.chr1 56232519 1 + 122678785 A i canFam3.chr1 I 73 C 0 e otoGar3.GL873575 10997265 5995 - 12073884 I e saiBol1.JH378287 1361161 3627 - 2905041 I e aotNan1.NW_018494782v1 1575617 1960 - 1813869 M e dasNov3.JH569188 662682 121 + 760995 I e colAng1.NW_012114488v1 15675845 11 - 23502949 I e nomLeu3.chr3 156381739 3 + 157873769 I e manLeu1.NW_012106474v1 8317373 4585 - 10857215 M a score=52804.000000 s hg38.chr6_KB021644v2_alt 176622 10 + 185823 GGTGTGCAGT s panTro5.chr6 173639591 10 + 175400573 GGTGTGCAGT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171865004 10 + 173848474 GGTGTGCAGT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11551356 10 - 12463322 GGTGTGCAGT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156381742 10 + 157873769 GGTGAGCAGT i nomLeu3.chr3 I 3 C 0 s rheMac8.chr4 170409169 10 + 172585720 GGTGTGCAGT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169152451 8 - 170955103 GGTGTGCA-- i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8438339 10 + 10161646 GGTGTGCAGT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1469522 10 + 3144229 GGTGTGCAGT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96753885 10 + 98384682 GGTGTGCAGT i chlSab2.chr13 C 0 C 0 s calJac3.chr4 169964786 10 + 171630274 GGTGTGCAGT i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1329099 10 - 2164891 GGTGGGCAGT i cebCap1.NW_016107695v1 C 0 C 0 s canFam3.chr1 56232520 8 + 122678785 GATATGCA-- i canFam3.chr1 C 0 C 0 e otoGar3.GL873575 10997265 5995 - 12073884 I e saiBol1.JH378287 1361161 3627 - 2905041 I e aotNan1.NW_018494782v1 1575617 1960 - 1813869 M e dasNov3.JH569188 662682 121 + 760995 I e colAng1.NW_012114488v1 15675845 11 - 23502949 I e manLeu1.NW_012106474v1 8317373 4585 - 10857215 M a score=10132.000000 s hg38.chr6_KB021644v2_alt 176632 9 + 185823 CAGCCCTCC s panTro5.chr6 173639601 9 + 175400573 CAGCCCTCC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171865014 9 + 173848474 CAGCCCTCC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11551366 9 - 12463322 CAGCCCTCC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156381752 9 + 157873769 GCCCCTTCC i nomLeu3.chr3 C 0 C 0 s calJac3.chr4 169964796 9 + 171630274 GAGCCCTCC i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1329109 9 - 2164891 GCCCCTTCT i cebCap1.NW_016107695v1 C 0 C 0 s canFam3.chr1 56232528 5 + 122678785 ----CCACC i canFam3.chr1 C 0 C 0 e otoGar3.GL873575 10997265 5995 - 12073884 I e saiBol1.JH378287 1361161 3627 - 2905041 I e aotNan1.NW_018494782v1 1575617 1960 - 1813869 M e dasNov3.JH569188 662682 121 + 760995 I e colAng1.NW_012114488v1 15675845 11 - 23502949 I e chlSab2.chr13 96753895 0 + 98384682 C e cerAty1.NW_012002071v1 1469532 0 + 3144229 C e manLeu1.NW_012106474v1 8317373 4585 - 10857215 M e macNem1.NW_012011000v1 8438349 0 + 10161646 C e rheMac8.chr4 170409179 0 + 172585720 C e macFas5.chr4 169152459 0 - 170955103 C a score=22712.000000 s hg38.chr6_KB021644v2_alt 176641 9 + 185823 TGTGGTGGA s panTro5.chr6 173639610 9 + 175400573 TGTGGTGGA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171865023 9 + 173848474 TGTGGTGGA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11551375 9 - 12463322 TGTGGTGGA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156381761 9 + 157873769 TGTGGTGGA i nomLeu3.chr3 C 0 C 0 s macFas5.chr4 169152459 2 - 170955103 ----GT--- i macFas5.chr4 C 0 C 0 s calJac3.chr4 169964805 9 + 171630274 TGTGATGGA i calJac3.chr4 C 0 I 44 s cebCap1.NW_016107695v1 1329118 9 - 2164891 TGTGGTAGA i cebCap1.NW_016107695v1 C 0 I 1 s canFam3.chr1 56232533 9 + 122678785 TGTGATAGA i canFam3.chr1 C 0 I 1 s dasNov3.JH569188 662803 9 + 760995 tgtgatgga i dasNov3.JH569188 I 121 C 0 e otoGar3.GL873575 10997265 5995 - 12073884 I e saiBol1.JH378287 1361161 3627 - 2905041 I e aotNan1.NW_018494782v1 1575617 1960 - 1813869 M e colAng1.NW_012114488v1 15675845 11 - 23502949 I e chlSab2.chr13 96753895 0 + 98384682 C e cerAty1.NW_012002071v1 1469532 0 + 3144229 C e manLeu1.NW_012106474v1 8317373 4585 - 10857215 M e macNem1.NW_012011000v1 8438349 0 + 10161646 C e rheMac8.chr4 170409179 0 + 172585720 C a score=1365.000000 s hg38.chr6_KB021644v2_alt 176650 1 + 185823 T s panTro5.chr6 173639619 1 + 175400573 T i panTro5.chr6 C 0 C 0 s panPan2.chr6 171865032 1 + 173848474 T i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11551384 1 - 12463322 T i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156381770 1 + 157873769 T i nomLeu3.chr3 C 0 C 0 s dasNov3.JH569188 662812 1 + 760995 t i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10997265 5995 - 12073884 I e saiBol1.JH378287 1361161 3627 - 2905041 I e aotNan1.NW_018494782v1 1575617 1960 - 1813869 M e cebCap1.NW_016107695v1 1329127 1 - 2164891 I e calJac3.chr4 169964814 44 + 171630274 I e colAng1.NW_012114488v1 15675845 11 - 23502949 I e canFam3.chr1 56232542 1 + 122678785 I e chlSab2.chr13 96753895 0 + 98384682 C e cerAty1.NW_012002071v1 1469532 0 + 3144229 C e manLeu1.NW_012106474v1 8317373 4585 - 10857215 M e macNem1.NW_012011000v1 8438349 0 + 10161646 C e rheMac8.chr4 170409179 0 + 172585720 C e macFas5.chr4 169152461 0 - 170955103 C a score=15964.000000 s hg38.chr6_KB021644v2_alt 176651 10 + 185823 GGGGGATGGT s panTro5.chr6 173639620 10 + 175400573 GAAGGATGAT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171865033 10 + 173848474 GAAGGATGAT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11551385 10 - 12463322 GGAGGATGGT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156381771 10 + 157873769 GGAGGATGGT i nomLeu3.chr3 C 0 C 0 s calJac3.chr4 169964858 10 + 171630274 GGAGGATGGT i calJac3.chr4 I 44 C 0 s cebCap1.NW_016107695v1 1329128 10 - 2164891 GGAGGATGGT i cebCap1.NW_016107695v1 I 1 C 0 s canFam3.chr1 56232543 5 + 122678785 -GAGGT---- i canFam3.chr1 I 1 C 0 s dasNov3.JH569188 662813 10 + 760995 gaaagtaggt i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10997265 5995 - 12073884 I e saiBol1.JH378287 1361161 3627 - 2905041 I e aotNan1.NW_018494782v1 1575617 1960 - 1813869 M e colAng1.NW_012114488v1 15675845 11 - 23502949 I e chlSab2.chr13 96753895 0 + 98384682 C e cerAty1.NW_012002071v1 1469532 0 + 3144229 C e manLeu1.NW_012106474v1 8317373 4585 - 10857215 M e macNem1.NW_012011000v1 8438349 0 + 10161646 C e rheMac8.chr4 170409179 0 + 172585720 C e macFas5.chr4 169152461 0 - 170955103 C a score=2654777.000000 s hg38.chr6_KB021644v2_alt 176661 430 + 185823 GGGAACACCCAAGGTGCAGA--CTGCCTCGTGTGGTTCCTGAAGTCATGT--CTTTTCCTCCCAG-TCCCCGATTCTTGGCT-GTGTGTACTGTCAAGGAGGC--AGTGCCTTCTGCTGGCCAAGGGGTCTGGAGTGCATGTTCCTCCTGCTCACTCAGTCGTCCCTCAGCTCTTGTAG-----------CTCTGCAC-------CCCACGGTCTCCATCTGACACCTTGTCCCTTAGAGAAA-CCCTGCACCATGCTGT-GTG-CCGGCTGGCCTCCCTGTGG-GTCAGATTCATGGCCCTGGGGACCAGAGGAGTGGGCCTCCCGCCAGTAGCACTAAGGCCACGTGGACGCACA--GAGGCTCCTAAGCGAT-GC-CTGAGGCTCCTCCCG-CTGGCTGAGACATGCCGCCCTGTGACCTAGGCCGGGAAGGC---CAAGACACCCCAGCAG-----------CCCAGG---------------------CACC--GCC s panTro5.chr6 173639630 430 + 175400573 GGGAACACCCAAGGTGCAGA--CTGCCTCATGTGGTTCCTGAAGTCATGT--CTTTTCCTCCCAG-TCCCCGATTCTTGGCT-GTGTGTACTGTCAAGGAGGC--AGTGCCTTCTGCTGGCCAAGGGGTCTGGAGTGCATGTTCCTCCTGCTCACTCAGTCCTCCCTCAGCTCTTGCAG-----------CTCTGCAC-------CCCACGGTCTCCATCTGACACCTTGTCCCTTAGAGAAA-CCCTGCACCACGCTGT-GTG-CCGGCTGGCCACCCTGTGG-GTCAGATTCACGGCCCTGGGGACCAGAGGAGTGGGCCTCCCGCCAGTAGCACTAAGTCCACATGGATGCACA--GAGGCTCCTAAGCGAT-GC-CTGAGCCTCCTCCCG-CTGGCTGAGACATGCCGCCCTGTGACCTAGGCCAGGAAGGC---CAAGACACCCCAGCAG-----------CCCAGG---------------------CACC--ACC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171865043 430 + 173848474 GGGAACACCCAAGGTGCAGA--CTGCCTCATGTGGTTCCTGAAGTCATGT--CTTTTCCTCCCAG-TCCCCGATTCTTGGCT-GTGTGTACTGTCAAGGAGGC--AGTGCCTTCTGCTGGCCAAGGGGTCTGGAGTGCATGTTCCTCCTGCTCACTCAGTCCTCCCTCAGCTCTTGCAG-----------CTCTGCAC-------CCCACGGTCTCCATCTGACACCTTGTCCCTTAGAGAAA-CCCTGCACCACGCTGT-GTG-CCGGCTGGCCACCCTGTGG-GTCAGATTCACGGCCCTGGGGACCAGAGGAGTGGGCCTCCCGCCAGTAGCACTAAGTCCACATGGATGCACA--GAGGCTCCTAAGCGAT-GC-CTGAGCCTCCTCCCG-CTGGCTGAGACATGCCGCCCTGTGACCTAGGCCAGGAAGGC---CAAGACACCCCAGCAG-----------CCCAGG---------------------CACC--ACC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11551395 430 - 12463322 GGGAACACCCAAGGTGCACA--CTGCCTTGTGTGGTTCCTGAAGTCTTGT--CTTTTCCTGCCAG-TCCCCGATTCTCGGCT-GTGTGTACTGTCAAGGAGGC--AGTGCCTTCTGCTGGCCAAGGGGTCTGGAGTGCATGTTCCTCCTGCTCACTCAGTCCTCCCTCAGCTCTTGCAG-----------CTCTGCAC-------CCCACGGTCTCCATCTGACACCTTGTCCCTTAGAGAAA-CCCTGCACCACGCTGT-GTG-CCGGCTGGCCTCCCTGTGG-GTCAGATTCATGGCCCTGGGGACCAGAGGAGTGGGCCTCCCACCAGTAGTACTAAGTCCACATGGATGCACA--GAGGCTCCTAAGCGAT-GC-CTGAGCCTCCTCCCA-CTGGCTGAGACATGCCGCCCTGTGACCTAGGCCGGGAAGGC---CAAGACACCCCAGCAG-----------CCCAGG---------------------TACC--GCC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156381781 433 + 157873769 GGAAACACCCAAGGTGCAGACTCTGCCTCGTGTGGTTCCTGAAGTGATGT--CTTTTCCTCCCAG-TCCCCGATTCTTAGCT-GTGTGTGCTGTCGAGGAGGC--AGTGCCTTCTGCTGGCCAAGGGGTCTGGAGTGCACGTT-CTCCTGCTCACTCAGTCCTCCCTCAGCTCTTGCAG-----------CTCTGCAC-------CCCACAGTCTCCATCCGACACCTCGTCCCTTAGAGAAA-CCCTGCATCACGCTGT-GTG-CCGGCTGGCCTTTCTGTGG-GTCAGATCCAGGGCCCTGGGGACCAGAGGAGTGTGCCTCCCACCAGTAGCACTAAGGCCACATGGACGCACA--GAGGCTCCTAAGCGAT-GC-CTAAGCCTCCTCCCG-CTGGCTGAGACATGCCGCCCTGTGACCTAGGCCGGGAAGGC---CAAGACACCCCAGCAG-----------CCCATA---------------------CAACCGCCC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170409179 433 + 172585720 AGGAACACCCAAAGCACAAGCTCTGCCTGGTGTGGTTCGTGAAGCGGTGC--CTTTTCCTCCCAG-TGCCTGATTCTCAGCT-GTGTGTGCTGTCAAGGAGGC--AGTGGCTTCTGCTGGCCAAGGGGTGTGGAGTGCATGTTCTTCTTGCTCACTCAGTCCTCCCTCAGCTTTTGCAG-----------CTCTGCAC-------CCCACGGTCTCCATCTGACACCTTGTCCCTTAGAGAAA-CCCTGCACCATGCTGT-GTG-CCGGCTCACCTCTCTGTGG-GTCAGATCCATGGCCCTGGGGACCAGAGGGGTGAGGCTCCCGCTAGTAGCACTAAGGCCACGTGGATGCACA--GAGGCTCCTAAGCGAT-GC-CTGAGCCTCCTCCCG-CTGGCTGAGACATGCCACCCTGTGACCTAGGCCAGGAAGGC---CAAGAcaccccagcag-----------cccaca---------------------cccc-accc i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169152461 433 - 170955103 AGGAACACCCAAAGCACAAGCTCTGCCTCGTGTGGTTCGTGAAGCGGTGC--CTTTTCCTCCCAG-TGCCTGATTCTCAGCT-GTGTGTGCTGTCAAGGAGGC--AGTGCCTTCTGCTGGCCAAGGGGTGTGGAGTGCATGTTCTTCTTGCTCACTCAGTCCTCCCTCAGCTTTTGCAG-----------CTCTGCAC-------CCCACGGTCTCCATCTGACACCTTGTCCCTTAGAGAAA-CCCTGCACCATGCTGT-GTG-CCGGCTCACCTCTCTGTGG-GTCAGATCCATGGCCCTGGGGACCAGAGGGGTGAGGCTCCCGCTAGTAGCACTAAGGCCACGTGGACGCACA--GAGGCTCCTAAGCGAT-GC-CTGAGCCTCCTCCCG-CTGGCTGAGACATGCCACCCTGTGACCTAGGCCAGGAAGGC---CAAGAcaccccagcag-----------cccaca---------------------cccc-accc i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8438349 433 + 10161646 AGGAACACCCAAAGCACAAGCTCTGCCTCGTGTGGTTCGTGAAGCGGTGC--CTTTTCCTCCCAG-TGCCTGATTCTCAGCT-GTGTGTGCTGTCAAGGAGGC--AGTGCCTTCTGCTGGCCAAGGGGTGTGGAGTGCATGTTCTTCTTGCTCACTCAGTCCTCCCTCAGCTTTTGCAG-----------CTCTGCAC-------CCCACGGTCTCCATCTGACACCTTGTCCCTTAGAGAAA-CCCTGCACCATGCTGT-GTG-CCGGCTCACCTCTCTGTGG-GTCAGATCCATGGCCCTGGGGACCAGAGGGGTGAGGCTCCCGCTAGTAGCACTAAGGCCACGTGGACGCACA--GAGGCTCCTAAGCGAT-GC-CTGAGCCTCCTCCCG-CTGGCTGAGACATGCCACCCTGTGACCTAGGCCAGGAAGGC---CAAGACACCCCAGCAG-----------CTCACA---------------------CACC-ACCC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1469532 433 + 3144229 AGGAACACCCAAAGCACAAGCTCTGCCTCGTGTGGTTCGTGAAGCGGTGC--CTTTTCCTCCCAG-TGCCTGATTCTCAGCT-GTGTGTGCTGTCAAGGAGGC--AGTGCCTTCTGCTGGCCAAGGGGTGTGGAGTGCATGTTCTTCTTGCTCACTCAGTCCTCCCTCAGCTTTTGCAG-----------CTCTGCAC-------CCCACGGTCTCCATCTGACACCTTGTCCCTTAGAGAAA-CCCCGCACCATGCTGT-GTG-CCGGCTCACCTCTCTGTGG-GTCAGATCCATGGCCCTGGGGACCAGAGGGGTGAGGCTCCCGCTAGTAGCACTAAGGCCACGTGGACGCACA--GAGGCTCCTAAGCGAT-GC-CTGAGCCTCTTCCCG-CTGGCTGAGACATGCCACCCTGTGACCTAGGCCAGGAAGGC---CAAGACACCCCAGCAG-----------CCCACA---------------------CACC-ACCC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96753895 432 + 98384682 AGGAACACCCAAAGTGCAGGCTCTGCCTCGTGTGGTTCGCGAAGCGGTGC--CTTTTCCTCCCAG-TGCCTGATTCTCAGCT-GTCTGTGCTGTCAAGGAGGC--AGTGCCTTCTGCTGGCCAAGGGGTGTGGAGTGCATGTTTCTCTTGCTCACTCAGTCCTCCCTCAGCTTTTGCAG-----------CTGTGCA--------CCCACGGTCTCCATCTGACACCTTGTCCCTTAGAGAAA-CCCTTCACCATGCTGT-CTG-CCGGCTCACCTCTCTGTGG-GTCAGATCCATGGCCCTGGGGACCAGAGGGGTGAGGCTCCCGCCAGTAGCACTAAGGCCACGTGGACGTACA--GAGGCTCCTACGCGAT-GC-CTGAGCCTCCTCCCG-CTGGCTGAGACATGCCACCCTGTGACCTAGGCCAGGAAGGC---CAAGAcaccccagcag-----------cccaca---------------------cccc-accc i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15675856 431 - 23502949 AGGAACACCCAAAGTGCAAGCTCTGCCTCGTGTGGTTCGTGAAGCAGTGC--CTTTTCCTCCCAG-TGCCTGATTCTCAGCT-GTGTGTGCTGTCAAGGAGGC--AGTGCCTTCTGCTGGCCAAGGGGTCTGGAGTGCATGTTCCTCTTGCTCACTCAGTCCTCCCTCAGCTTTTGCAA-----------CTGTGCA--------CCCACGGTCTCCAGCTGACACCTTGTCCCTTAGAGAAA-CCCTGCACCATGCTGT-GTG-CCGGCTCACCTCTCTGTGG-GTCAGATCCATGGCCCTGGGGACCAGAGGGGTGAGGCTCCTGCCAGTAGCACTAAGGCCACGTGGACGCCCA--GAGGCTCCTAAGCGAT-GC-CTGAGCCTCCTCCCG-CTGGCTGAGACATGCCA-CCGGTGACCTAGGCCAGGAAGGC---CAAGACACCTCAGCAG-----------CCCACA---------------------CACC-ACCC i colAng1.NW_012114488v1 I 11 C 0 s calJac3.chr4 169964868 411 + 171630274 GGGAGCAGCCAAGGTGCAGGCT----------------CTGCAGCAACAC--CTTTTCCT-CCCG-TGCCTGA--CTCGGC---TGTGTGCTGTCAGGGAGGC--AGTACCTTCTGCTGGGCGAGGGGTCTGGAGTGCATGCTCCTCCCACTCACTGAGTTCTCCCTCACCTCCTGCCA-----------CTCTGCAC-------CCCACGGTCTCCATCTGACACCTTGTCCCTGAGAGAAA-CCCTGCGGCACACTGT-GTG-CAAGCTCATCTCTCTGTGG-GTCACATCCACGGCCCGGGGCACCAGAGGAGTGTGTCTCCCGCTGGCATCGCCTAGGCGACATGGGCGCACA--GAGGCTCCTAAGCGAT-GT-CCGAGCCTCCCCTCG-CTGGCTGAGACATGCCGCCCCATGACCTGGGCCAGGAAGGA---CAAGACAGCCCAGCAG-----------CCCATG---------------------CACT-GCC- i calJac3.chr4 C 0 I 1 s cebCap1.NW_016107695v1 1329138 409 - 2164891 GGGAGCAGCCAAGGTGCAGGCTCTGCCTCCT-TGGCTCCTGCAGCGATGC--CTTTTCCTCCCCA-TGCCCGA--CTATGCT-GTGTGTGCTGTCAGGGAGGC--AGTGCGTTCTGCTGGGCGAGGGGTCTGGAGTGCATGCTCCTCCCACTCACTGAGTCCTCCCTCACCTCCTGCAG-----------CTCTGCAT-------CCCACGGTCTCCATCTGACACCTCGTCCCTGAGAGAAA-CCCTGCCGCATGTTGC-GTG-CCGGCTCATCTCTCTGTGG-GTCAGATCCACGGCCCAGGGCACCAGAGGAGTG----------------AACCTAGGCCACGTGGGCACACA--GAGGCTTCTAAGCGAT-GC-CCGAGCCTCCCCGT-----GCTGAGACACGCCGCCCTGTGACCTGGGCCAGGAAGGT---CGAGACACCCCAGCAG-----------CCCACA---------------------CACT-GCC- i cebCap1.NW_016107695v1 C 0 I 19 s canFam3.chr1 56232548 431 + 122678785 GGAGGCCTCCCAGGTGCGCCCTCTGCTTC-------TCATGCAGTAGCTT--CTTCATCT-CTGT-TGTCTAGTGCTCTGCTCGCATTTGGTATGAAAGCGGT-GGGTGCCTTCTTTTAG-CAGGAGGCAGATAGTG-GTGTT-----TGCTGACTCCATCCTCCTTCAGCTCCTACTGGTCATATATCCTTCTGCCT--TTCTGCCTGTGGTCTCCACCCAACACCTTGGCTCAGCAAGAAT-CTACCAGAGACGCCATGGGG-CCAGCTCATCT---TGTGG-G---GACACACGGTTATTGGCAGGAGAGG-TTATATCTCTTGACTATAGTGTCACAGCCACATGGCATCAGA--GAGACTTGTGAGTGCC-AAGCTAAGTGTCCTCCTG-TTGAGCAGGACACACTGCCTTTTAA-CTGGGCTAGAATGGCTCTCAAAGC-CCCTGGTGG-----------GTCATA---------------------AATC-ATC- i canFam3.chr1 C 0 I 8 s dasNov3.JH569188 662823 484 + 760995 -gggcca--catagtgtgtcctttgccttcactagtctctgAAATGATATCACTTTTCCTTTTGGTTATCTAATGCTCTGTTGGCATTTGACATGGAGAAGGTGGAGTGCCTTTGTTTGGCCCAAA----TGGGATGTATTGGCCATGTGCTAGCTAAGTTCTCTTTCAGCTCTTGCTG--TTTGTATTCCTCTCCAACTTTCTGCCTATGGTCTCCACCTGGCATATTGGCCTTTCATGAAATTTCTAAATTTTGGTAC-ATGTTCAAATTTTCTCACTGTGGTGTGAGGTCCATAACTGTTGACTTTGCAGGTGTGTTTCTGTTAACTCTGGCATCTATGTCATATGGATACTCAGGGAGACTCATGAGTGTCAAC-CAGGAATTCCTCCTGTCTGACCATAACACACCACCCTTTTAACTATGTTAAGATGGC--TTAAGACATCCCAGCAAGGTGGCCTCCTCTCAAAGAATCTGAACGAGTCTTAAATCACC----- i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10997265 5995 - 12073884 I e saiBol1.JH378287 1361161 3627 - 2905041 I e aotNan1.NW_018494782v1 1575617 1960 - 1813869 M e manLeu1.NW_012106474v1 8317373 4585 - 10857215 M a score=99586.000000 s hg38.chr6_KB021644v2_alt 177091 17 + 185823 CACCAGTTCCTCGCTTT s panTro5.chr6 173640060 17 + 175400573 CACCAGTTCCTCGCTTT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171865473 17 + 173848474 CACCAGTTCCTCGCTTT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11551825 17 - 12463322 CACCAGTTCCTTGCTTT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156382214 17 + 157873769 CACCAGTTCCTCGCTTT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170409612 17 + 172585720 caccAGTTCCTTGCTTT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169152894 17 - 170955103 caccAGTTCCTTGCTTT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8438782 17 + 10161646 CACCAGTTCCTTGCTTT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1469965 17 + 3144229 CACCAGTTCCTTGCTTT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96754327 17 + 98384682 caccAGTTCCTTGCTTT i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15676287 17 - 23502949 CACCAGTTCCTTGCTTT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169965280 17 + 171630274 CACCCGGCTCCAGTTTT i calJac3.chr4 I 1 I 1 s canFam3.chr1 56232987 17 + 122678785 CACCCTATTCTGATTGT i canFam3.chr1 I 8 I 2 s dasNov3.JH569188 663307 17 + 760995 CACCTCTTCCTAATTCC i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10997265 5995 - 12073884 I e saiBol1.JH378287 1361161 3627 - 2905041 I e aotNan1.NW_018494782v1 1575617 1960 - 1813869 M e cebCap1.NW_016107695v1 1329547 19 - 2164891 I e manLeu1.NW_012106474v1 8317373 4585 - 10857215 M a score=602141.000000 s hg38.chr6_KB021644v2_alt 177108 101 + 185823 ---------------------CCTTCGGCTCACAGGCATGTCCATCCTCTCCA--------------G---------------GAACA----------CACCTGAGC-TCTGTGCCTGGCGGTCTCACTCTTCCTCCTC----CC-ATTCATTGTGACAAAAGTGTA s panTro5.chr6 173640077 101 + 175400573 ---------------------CCTTAGGCTCACAGGCATGTCCATCCTCTCCA--------------G---------------GAACA----------CACCTGAGC-TCTGTGCCTGGCGGTCTCACTCCTCCTCCTC----CC-ATTCGTTGTGACGAAAGTGTA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171865490 101 + 173848474 ---------------------CCTTAGGCTCACAGGCATGTCCATCCTCTCCA--------------G---------------GAACA----------CACCTGAGC-TCTGTGCCCGGCGGTCTCACTCCTCCTCCTC----CC-ATTCGTTGTGACGAAAGTGTA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11551842 101 - 12463322 ---------------------CCTTCGGCTCACAGGCATGTCCATCCTCTCCA--------------G---------------GAACA----------CACCTGAGC-TCTGTGCCCGGCGGTCTCACTCCTCCTCCTC----CC-ATTCGTTGTGACGAAAGTGTA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156382231 101 + 157873769 ---------------------CCCTCAGCTCACAGGCATGTCCGTCCTCTCCG--------------G---------------GAACA----------CACCTGAGC-TCTGTGCCCGGCGGTCTCACTCCTCCTCCTC----CC-ATTCTTTGTGACGAGAGTGTA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170409629 102 + 172585720 ---------------------CCCTCAGCTCACAGGCATGTCCATCCTCTCCA--------------G---------------GAACA----------CACCTGAGC-TCTGTGCCCTGAGGTCTCACTCCTCCTCCCC----CTTATTCTTTGTGACTAGAGTGTA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169152911 102 - 170955103 ---------------------CCCTCAGCTCACAGGCATGTCCATCCTCTCCA--------------G---------------GAACA----------CACCTGAGC-TCTGTGCCCTGAGGTCTCACTCCTCCTCCCC----CCTATTCTTTGTGACTAGAGTGTA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8438799 102 + 10161646 ---------------------CCCTCAGCTCACAGGCATGTCCATCCTCTCCA--------------G---------------GAACA----------CACCTGAGC-TCTGTGCCCTGAGGTCTCACTCCTCCTCCCC----CCTATTCTCTGTGACTAGAGTGTA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1469982 102 + 3144229 ---------------------CCCTCAGCTCACAGGCATGTCCATCCTCTCCG--------------G---------------GAACA----------CATCTGAGC-TCTGTGCCCTGAGGTCCCACTCCTCCTCCCC----CCTATTCTTCGTGACTAGAGTGTA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96754344 102 + 98384682 ---------------------CCCTCAGCTCACAGGCATGTCCATCCTCTCCA--------------G---------------GAACA----------CATCTGAGC-TCTGTGCCCTGAGGTCTCACTCCTCCTCCCC----GCTACTCTTTGTGACTAGAGTGTA i chlSab2.chr13 C 0 C 0 s colAng1.NW_012114488v1 15676304 102 - 23502949 ---------------------CCCTCTGCTCACAGGCACGTCCATCCTCTCCA--------------G---------------GAACA----------CACCTGAGC-TCTGTGCCCTGAGGTCTCACTCCTCCTCCCC----CCTATTCTTTGTGACTAGAGTGTA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169965298 100 + 171630274 ---------------------CCCTCAGCTCACACACAGGTGAATCCTCTCCA--------------G---------------GA-CA----------CACTTGAGC-TCTGTGCCCTGTGGCCTCGCCCCTCCTCCTC----CC-ATTCTTTGTGACGAGAGTGCG i calJac3.chr4 I 1 C 0 s cebCap1.NW_016107695v1 1329566 101 - 2164891 ---------------------CCCTCAGCTCACACACAGGTGCATCCTCTCCA--------------G---------------GAGCA----------CACTTGAGC-TCTGTGCCCTGTGGCCTCGCCCCTCCTCCTC----CC-ATTCTTTGTGACGAGACTGCA i cebCap1.NW_016107695v1 I 19 C 0 s canFam3.chr1 56233006 114 + 122678785 ---------------------CCCTAAACTAGCACTCACATATGTCCTCTCCACATCAGAAGAGACCT---------------GAACA----------CACATGACCTTCCCTGCCATGTTCCCTCTCTTCTATTCACC-------ATCTTTCATGACAGCAACCAC i canFam3.chr1 I 2 C 0 s dasNov3.JH569188 663324 150 + 760995 ACTTCTTAGTGTTCTCCTAAAACCCAGACTAACACTGACATATGTTCTTTCCA--------------GGCTAGAAGAAAATTAGAACAAATATTTGATCATCTACCT-TTATTGCCATTTTCTCTATCTCTTTCTACTATGTACC-ATTTTTTAGGATAATAATAT- i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10997265 5995 - 12073884 I e saiBol1.JH378287 1361161 3627 - 2905041 I e aotNan1.NW_018494782v1 1575617 1960 - 1813869 M e manLeu1.NW_012106474v1 8317373 4585 - 10857215 M a score=4639329.000000 s hg38.chr6_KB021644v2_alt 177209 636 + 185823 AAGATctgtattcc---aggcgcagtagtacgtgctgtggccatggtttccccc----ac--------gattttgagaaagttactgttgttttcttcattat------------gcagaagaagctgagattcagagaagtgaagtgggctgcttaagacctcagacgtagggactgatgggac-------tggaCACAG------------------CATGCTGTTCACCATGACTGTCCTGCACCC-------------TTCAGAcctcaggagaacccaaggaggcaggtgcggctc--ttaagcacgtgctgctgacagggacaccgagccacagaggaa--------------caaagtcacccacgggacagcaacaga-ctggga-ggcatcgggtgaa-cccagcagggcagctcctgaatctgcccc-taa-actaGGGGCTGG--------CGCCTGTGGTCATTGCCGCCCACC--CCA--CAAAtgtttcggtcaat--agttttactggcacacagccacaggcattcactccacatagacattgtctgtagctgcttgcaaagctgtagccgctgagttgaataattgcaagcaagacc---------gcaaagcctaaaatacatatt-ttggtcctttaaaggaaaa-gtgtgctgacccctgGTCCAAAGCACCAGACTGTACTGCTCCCGATATGCAGCAGGCCTTGACTGAGGACAG-AGTATTTGTA s panTro5.chr6 173640178 635 + 175400573 AAGATCTGTATTCC---AGGCGCAGTGGTACGTGCTGTGGCCATGGTTTCCCC-----AC--------GATGTTGagaaagttactgttgttttcttcattat------------gcagaagaagctgagattcagagaagtgaagtgggctgcttaagacctcagacgtagggactgatgggac-------tggaCACAG------------------CATGCTGTTCACCACGACTGTCCTGCACCC-------------TTCAGACCTCAGGAGAACCCGAGGAGGCAGGTGTGGCTC--TTAAGCACGTTCTGCTGACAGGGACACCGAGCCACAGAGGAA--------------CAAAGTCACCCACGGGACAGCAACAGA-CTGGGA-GGCATCGGGTGAA-CCCAGCAGGGCAGCTCCTGAATCTGCCCC-TAA-ACTAGGGGCTGG--------CGCCTGTGGTCATTGCCGCTCACC--CCA--CAAAtgtttctgtcaat--agttttactggcacacagccacaggcattcactccacatagacattgtctgtagctgctttcaaagctgtagcagctgagttgaataattgcaaccaagacc---------gcaaagcctaaaatacatatt-ttggtccttaaaaggaaac-gtgtgctgacccctgGCCCAAAGCACCAGACTGTACTGCTCCCGCTATGCGGCAAGCTTTGACTGCGGACAG-AGTATTTTTA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171865591 635 + 173848474 AAGATCTGTATTCC---AGGCGCAGTGGTACGTGCTGTGGCCATGGTTTCCCC-----AC--------GATGTTGagaaagttactgttgttttcttcattat------------gcagaagaagctgagattcagagaagtgaagtgggctgcttaagacctcagacgtagggactgatgggac-------tggaCACAG------------------CATGCTGTTCACCACGACTGTCCTGCACCC-------------TTCAGACCTCAGGAGAACCCGAGGAGGCAGGTGTGGCTC--TTAAGCACGTTCTGCTGACAGGGACACCGAGCCACAGAGGAA--------------CAAAGTCACCCACGGGACAGCAACAGA-CTGGGA-GGCATCGGGTGAA-CCCAGCAGGGCAGCTCCTGAATCTGCCCC-TAA-ACTAGGGGCTGG--------CGCCTGTGGTCATTGCCGCTCACC--CCA--CAAAtgtttctgtcaat--agttttactggcacacagccacaggcattcactccacatagacattgtctgtagctgctttcaaagctgtagcagctgagttgaataattgcaaccaagacc---------gcaaagcctaaaatacatatt-ttggtccttaaaaggaaac-gtgtgctgacccctgGCCCAAAGCACCAGACTGTACTGCTCCCGCTATGCGGCAGGCTTTGACTGCGGACAG-AGTATTTTTA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11551943 635 - 12463322 AAGATCTGTATTCC---AGGCGCAGTAGTACGTGCTGTGGCCATGGTTTCCCC-----AC--------GATTTTGagaaagttactgttgttttcttcattat------------gcagaagaagctgagattcagagaagtgaagtgggctgcttaagacctcagacgtagggactgataggac-------tggacACAG------------------CACGCTGTTCACCACGACTGTCCTGCACCC-------------TTCAGACCTCAGGAGAACCCAAGGAGGCAGGTGCGGCTC--TTAAGCGCGTTCTGCTGACAGGGACACCGAGCCACAGAGGAA--------------CAAAGTCACCCACGGGACAGCAACAGA-CTGGGA-GGCATCGGGTGAA-CCCAGCAGGGCAGCTCCTGAATCTGCCCC-TAA-ACTAGGGGCTGG--------CGCCTGTGGTCATTGCCGCCCACC--CCA--CAAAtgtttctgtcaat--agttttactggcacacagccacaggcattcactccacatagacattgtctgtagctgctttcaaagctgtagcagctgagttgaataattgcaaccaagacc---------acaaagcctaaaatacatatt-ttggtcctttaaaggaaaa-gtgtgctgacccctgGTCCAAAGCACCAGATTGTACTGCTCCCGCTATGCGGCAGGCCTTGACTGCGGACAG-AGTATTTTTA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156382332 648 + 157873769 AAGATctgtattcc---aggcacagtagtaggtgctgtggctatggtttcccc-----ac--------aattttgagaaagttactgttgtttgcctcattat------------gcagaagaagctgagattcagagaagtgaagtgagctgcttaagacctcaggcgtagggactgatgggac-------tggaCACAG------------------CACGCTGTTCACCACAACTGTCCTGCACCC-------------TTCAGAcctcaggagaacccaaggaagcaggtgcagctc--ttaagcacgttctgccaacagggacaccgagccacagaggaacaaaggaactcg-ccaaagtcacccacgggacagcgacaga-ctggga-ggcatcgggtgaa-cccagcagggcagctcccgaatctgcccc-taa-actaGGGGCTGG--------TGCCTGTGGTCATTGCAGCCCACC--CCA--CAAACgtttctgtcaat--agttttactggctcacagccacaggcattcacttcacatagacattgtctgtagctgctttcaaagctgtagcaactgagttgaataattgcaaccaagacc---------gcaaagcctaaaatacatatt-ttggccctttaaaggaaaa-atacgctgacccctgGTCTAAAGCACCAGATTGTGCTGCGCCCACTATGAGGCAAGCCTTGACCACGGACAG-AGTATTTTTA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170409731 649 + 172585720 AAGATctgtattcc---aggcacagtagtaggtgttgtagctatggtttcccc-----ac--------aattttgggaaagttactgttgttttcttcattac------------gcagaagaagctgagattcagagaagtgaagggagctgcttaagaccccaggtgtagggactgacgggac-------tggaCACAG------------------CAAGCTGTTCACCATGACTGTCCTGCGtcc-------------ttcagacctcaggagaacctgaggaggcaggtgccgctc--ttaagcacgttctgccgccaaggacaccgagccacagaggaataaaggaactcg-ccaaagtcacccacgggacagcggcagacctggga-ggcatcgggtgaa-cccagcagggcaggtcctgaatctgccct-taa-actaGGGGCTGG--------CGCCTGTGATCATTGCAGCCCACC--CCA--CAAAtgtttctgtcaat--agttttgctggcacatagccccaggcatccactccacgtagacactgtctgtagctgctttcaaagctgtagcagctgagttgaatcatcgcaaccaagacc---------gcaaagcctaaaatacatatt-ttggcccttgacaggaaaa-gtgtgctgacccctgGTCTAAAGCACCAGATTGTGCTGCTCCCGCTGCGTGGCAGGCCTTGACCACGGACAG-AGTATTTTTA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169153013 649 - 170955103 AAGATctgtattcc---aggcacagtagtaggtgttgtagctatggtttcccc-----ac--------aattttgggaaagttactgttgttttcttcattac------------gcagaagaagctgagattcagagaagtgaagggagctgcttaagaccccaggtgtagggactgacgggac-------tggaCACAG------------------CAAGCTGTTCACCATGACTGTCCTGCGtcc-------------ttcagacctcaggagaacctgaggaggcaggtgccgctc--ttaagcacgttctgccgccaaggacaccgagccacagaggaataaaggaactcg-ccaaagtcacccacgggacagcggcagacctggga-ggcatcgggtgaa-cccagcagggcaggtcctgaatctgccct-taa-ACTAGGGGCTGG--------CGCCTGTGATCATTGCAGCCCACC--CCA--CAAAtgtttctgtcaat--agttttgctggcacatagccacaggcatccactccacgtagacattgtctgtagctgctttcaaagctgtagcagctgagttgaatcatcgcaaccaagacc---------gcaaagcctaaaatacatatt-ttggccctttacaggaaaa-gtgcgctgacccctgGTCTAAAGCACCAGATTGTACTGCTCCCGCTGCGTGGCAGGCCTTGACCACGGACAG-AGTATTTTTA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8438901 648 + 10161646 AAGATCTGTATTCC---AGGCACAGCAGTA-GTGTTGTAGCTATGGTTtcccc-----ac--------aattttgggaaagttactgttgttctcttcattac------------gcagaagaagctgagattcagagaagtgaagggagctgcttaagaccccaggtgtagggactgacgggac-------tggaCACAG------------------CAAGCTGTTCACCATGACTGTCCCGCGtcc-------------ttcagacctcaggagaacctgaggaggcaggtgccgctc--ttaagcacgttctgccgccaaggacaccgagccacagaggaataaaggaactcg-ccaaagtcacccacgggacagcggcagacctggga-ggcatcgggtgaa-cccagcagggcaggtcctgaatctgccct-taa-actaGGGGCTGG--------CGCCTGTGATCATTGCAGCCCACC--CCA--CAAAtgtttctgtcaat--agttttgctggcacatagccacaggcatccactccacgtagacactgtctgtagctgctttcaaagctgtagcagctgagttgaatcatcgcaaccaagacc---------gcaaagcctaaaatacatatt-ttggccctttacaggaaaa-gtgtgctgacccctgGTCTAAAGCACCAGATTGTACTGCTCCCGCTGCGTGGCAGGCCTTGACCACGGACAG-AGTATTTTTA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1470084 645 + 3144229 AAGATCTGTATTCC---AGGCACAGTAG---GTGTTGTAGCTATGGTTtcccc-----ac--------aattttgagaaagttactgttgttttcttcattat------------gcagaagaagctgagattcagagaagtgaagggagctgcttaagaccccaGGTGTAGGGACTGACGGGAC-------TGGACACAG------------------CAAGCTGTTCACCATGACTGTCCTGCGtcc-------------ttcagacctcaggagaacctgaggaggcaggtgccgctc--ttaagcacgttctgccgccaaggacaccgagccacagaggaataaaggaactcg-ccaaagtcacccacgggacagcggcagacctggga-ggcatcgggtgaa-cccagcagggcaggtcctgaatctgcccc-taa-actaGGGGCTGG--------CGCCTGTGGTCATTGCAGCGCACC--CCA--CAAAtgtttctgacaat--agttttgctggcacatagccacaggcatccactccacgtagacattgtctgtagctgctttcaaagctgtagcagctgagctgaatcatcgcaaccaagacc---------gcaaagcctaaaatacatatt-ttggccctttacaggaaaa-gtgtgctgacccctgGTCTAAAGCACCAGATTGTACTGCTGCCGCTGTGTGGAAGGCCTTGAACACGGACAG-AGTG-TTTTA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96754446 649 + 98384682 AAGATctgtattcc---aggcacagtagtaggtgttgtagctatggtttcccc-----ac--------aattttgagaaagttactgttgttttcttcattat------------gcagaaggagctgagattcagagaagtgaagggagctgcttaagaccccagGTGTAGGGACTGACGCGAC-------TGGACACAG------------------CAAGCTGTTCACCATGACTGTCCTGCGCCC-------------TTCAGACCTCAGGAGAACCTGAGGAGGCAGGTGCCGCTC--TTAAGCACGTTCTGCCGCCAAggacaccgagccacagaggaataaaggaactcg-ccaaagtcacccacgggacagcggcagacctggga-GGCATCGGGTGAA-CCCAGCAGGGCAGGTCCTGAACCTGCCCT-TAA-ACTAGGGGCTGG--------TGCCTGTGGTCATTGCAGCCCACC--CCA--CAAAtgtttctgtcaat--agttttgctggcctatagccacaggcatccactccacgtagacatggtctgtagctgctttcaaagctgtagccgctgagtggaatcattgcaacgaagacc---------gcaaagcctaaaatacatatt-ttggccctttacaggaaaa-gtgtgctggcccctgCTCTAAAGCACCAGATTGTACTGCTTCTGTTGTGTGGCAGGCCTTGAGCACGGACAG-AGTATTTTTA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8321958 645 - 10857215 AAGATctgtattcc---aggcacagtagtaggtgttgtagctatggtttcccc-----ac--------aattttgggaaagttactgttgttttcttcattat------------gcagaagaagctgagattcagagaagtgaagggagctgcttaagacccca-gtgtagggactgacgggac-------tgg--aCAG------------------CAAGCTGTTCACCATGACTGTCCTGCGtcc-------------ttcagacctcaggagaacttgaggaggcaggtgctgctc--ttaagcacgttctgccgccaaggacaccgagccatagaggaataaaggaactcg-ccaaagtcacccacgggacagcggcagacctggga-ggcatcgggtgaa-cccagcagggcaggtcctgaatctgcccc-taa-ACTaggggctgg--------cgcctgtggtcattgcagcccacc--cca--caaatgtttctgtcaat--agttttgctggcacatagccacaggcatccactccacgtagacattgtctgtagctgctttcaaagctgtagcagctgagctgaatcatcacaaccaagacc---------gcaaagcctaaaatacgtatt-ttggccctttacaggaaaa-gtgtgctgacccctgGTCTAAAGCACCAGATTGTTCTGCTGCCGCTGTGTGGCAGGCCTTGACCACGGACAG-AATA-TTTTA i manLeu1.NW_012106474v1 M 4585 C 0 s colAng1.NW_012114488v1 15676406 649 - 23502949 AAGATctgtattcc---aggcacagtagtaggtgttatagctatggtttcccc-----ac--------aattttgagaaagttgctgttggtttcttcattac------------gtagaagaagctgagattcagagaagtgaagtgagctgcttaagaccccaggtgtagagactgacgggac-------tggACACAG------------------CAAGCTGTTCACCATGACTGTCCTGCACCC-------------TTCAGAcctcaggagaacctgaggaggcaggtgccgctc--ttaagcacgttctgccgccaaggacaccgagccacagaggaacaaaggaactcg-ccaaagtcacccacgggacagcggcagacctggga-ggcatcaggtgaa-cccagcagggcaggtcctgaatctgccct-tga-ACTaggggctgg--------cgcctgtggtcattgcagcccacc--cca--caaatgtttctgtcaac--agttttgctggcatatagccacaggcattcactccacgtagacattgtctgtagctgctttcaaagctgtagcagctgagttgaatcattgcaacgaagacc---------gcaaagcctaaaatacatatt-ttggccctttacaggaaaa-ggatgctgactcctgTTCTAAAGCACCAGATTGTACTGCTCCCACTGTGTGTCAGGCCTTGACCACGGACAG-AGTATTTTTA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169965398 621 + 171630274 AAGATCCGCATCCC---AGGCACAGTAGTAGGTGCTGTAG-----------------------------------------------TTATTTTCTtcattatctccattattcaggagaagaagctgagattcagagaagagaagtgacctgcttaagatcccgggcctaggaagcgatgagct-------gggacACAG------------------CACGCTGTTCACCGCGACGATCCTGTCCCC-------------TTCAGAcctcatgagaac---aggaggcaggtgcggctc--ctaagcacgttgtgccaacagggacgccaagccacagaggaacaaaggaactcg-ccagagtcacccactggatagcagcagagctggga-cacagcaggtgaa-cacggcagggtagctcccgaatctgctgt-taa-ccT-ggggccggtgtacagccgcctgtggccactgcagcccacc--cca--catgtgtttctgtcagt--gcttttcccggcac--agccacaggcgttcatgccacagggacgttgtctgtgcctgccttcacaggggtagcagctgagttgaataattgcaaccaagacc---------acaaagcctaagacatatactcctggcccttcacagg-aga-gtgtgctgaccc-TGCTCTAA---ACCAGGCAG--CTGCTCCCGTTCCATGGCAGGC-TTGACCACGAGCAC-ACTG-TTTTG i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1329667 668 - 2164891 AAGATccgtatccc---aggcacagtagtaggtgctgtagttatggttttacccacaaca--------aattttgagaaacttatttttattttcttcatcatctccatcattcaggagaagaagctgagattcggagaagtgaagtgacccgcttaagatcccgggcctaggaagtggtgagcc-------gggG-ACAG------------------CATGCTGTTCACCACGACCGTCCTGCCCCC-------------ttcagacctcgtgagaacagaaggaggcaggtgcgactc--ctaagcacattctgtcaacagggacgccaagccacagaggaacaaaggaactcg-ccagagtcacctactggatagcagcagagctggga-cacgccaggttaa-cacagcagggtcgctcccgaacctgccat-taa-ccTAGGGGCGAGGGCACGGCCGCCTGTGGCCACTGcagcccgcc--cca--cacgtgtttctgtcagt--acttttcctggcac--agccacaggcgctcatgccacagggacgttgtctgtggctgctttcaaagcggtagcagctgagttgaataattgcaacccagacc---------acaaagcccaagatatatattcctggcccttcacaggaaaa-gtgtgctgaccTGTGCTCTAA---AGCAGACAGTACTGCTCCTGTTACATGGCAGGC-TTGACCACGAGCAC-AGTGTTTTTG i cebCap1.NW_016107695v1 C 0 C 0 s canFam3.chr1 56233120 607 + 122678785 AGGATctctgtacc---aggtatggaattaaatacttcaatttgtttttcttc-----ac----aacaaactctgagatagtgagtgctgttatctacattttctcagttatacagttgaggaaacag-gatactaagaaattacagtgcctgtttatgatcttagacctagggagtaacTACCC--------------------------------------CTAGTCACTAC-CCCACTCTGCCCCC-----------CATTCAGACCTCATGAGGACATA--GAGACACGGTCAGTGG--TGGAGCACAGCTTACAGACAGAGTC-------------------------CTGC-CCATGGTCACCCCT----CACTGATGGTGCTGGGA-T--------------------GGGTAGCTCCAGAATCCATCCT-CGAGACTagtggttggcacactgcagtccttgggcattgaggcccact--ttggccaaggattcttgttaat-aagttttattgtggtgt-------gccaccccttccttatg--tgttgtctatggctgctttc-cagctactgcagcagaattgagtagatgcaaccaaaaccatatggcttgcaaagcctataatacatattcctgcccctttacag--aaa-gtttgctgaccccCA-TCTAAGCCATCAGATCACACTTCTACCACCATGCTAAGGGGTGGG-----GGACAGAAATGTCTTTC i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 663474 683 + 760995 --------TATGCCTATAGGAAAAGTATTGAGTGGTTTAAT--TGATTTTTTA-----ACTTACTACTGATTTtaagatagttactattactatcttcagtat---ctttatacagcagaggaaactaagat------------agggaggcacttaagatggcaaaactagtaagtgacagagtcaagacttgaacccaggtcgtctggtggcagatccatactattaacc---actgcactgtacCTGCCTTTCCTTtcattcaaacctcatcaatat----------gggtacaattttattaagcccactttacagatgggggaattaagtca---aagaattaagtaacttgcccaaagtcatcctctagcaaatgacagagctgggatggcatttgatgagtcctagtaatatatccccagaatctgtcctctaa-gttaggggtcagaaaacta-catcctgaagctttttggcccatcatcac--catctgtttttgtatatgaagttatgttggaacatggccgcacccactaatt-----tatgtcttgtttatgattgctttccaa-tgacaacagcagggttgagtagttgcaaccgagacc---------acatgacctaaaatatatcttccttgccctttacagaaaaatgtttgctgatcactgccctaaaccaccagattatactgCACCCACCACATGCTAAGCCTTGACAGTAGGCAGTAGTGTTTTTC i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10997265 5995 - 12073884 I e saiBol1.JH378287 1361161 3627 - 2905041 I e aotNan1.NW_018494782v1 1575617 1960 - 1813869 M a score=282825.000000 s hg38.chr6_KB021644v2_alt 177845 33 + 185823 TCTACACTGTGGAAGGATATCTGAGGTCCTCTT- s panTro5.chr6 173640813 33 + 175400573 GCTACACTGTGGAAGGATATCTGAGGTCCTCTT- i panTro5.chr6 C 0 C 0 s panPan2.chr6 171866226 33 + 173848474 GCTACACTGTGGAAGGATATCTGAGGTCCTCTT- i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11552578 33 - 12463322 TCTACACTGTGGAAGGATATCTGAGGTCCTCTT- i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156382980 33 + 157873769 TCTACACTGTGGAAGGATATCTGAGGTCCTCTT- i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170410380 33 + 172585720 TCCACACGGTGGAAGGATATCTGAGGTCCTGTT- i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169153662 33 - 170955103 TCTACACGGTGGAAGGATATCTGAGGTCCTGTT- i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8439549 33 + 10161646 TCTACACGGTGGAAGGGTATCTGAGGTCCTGTT- i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1470729 33 + 3144229 TTTACACGGTGGAAGGATATCTGAGGTCCTCTT- i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96755095 33 + 98384682 TCTACACGGTGGAAGGATATCTGAGGTCCTCTC- i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8322603 33 - 10857215 TCTACACGGTGGAAGGATATCTGAGGTCCTGTT- i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15677055 33 - 23502949 TCTACACGGTGGGAGGATATCTGAGGTCCTCTT- i colAng1.NW_012114488v1 C 0 I 260 s calJac3.chr4 169966019 31 + 171630274 CTTACAC--TGGACAGATGTCTGACGTGCTCTT- i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1330335 33 - 2164891 TCTACACTGTGGACAGATATCTGACGTCCTCTT- i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1577580 33 - 1813869 TCTACACTGTGGACAGATGTCTGACATCCTCTT- i aotNan1.NW_018494782v1 M 1960 C 0 s canFam3.chr1 56233727 33 + 122678785 TTTATGCTACAGGAAGGTGTCTGGGGTCTTCTC- i canFam3.chr1 C 0 I 1 s dasNov3.JH569188 664157 34 + 760995 TTTACACTATCCCTTAATATCTAAGGTCTTCTCT i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10997265 5995 - 12073884 I e saiBol1.JH378287 1361161 3627 - 2905041 I a score=438690.000000 s hg38.chr6_KB021644v2_alt 177878 61 + 185823 GAAAAGCTCAATGTCCTACT---GAGCATGGGCAGCAACACCTTCAC------------TGAGGGGTGAGAGCTGG s panTro5.chr6 173640846 61 + 175400573 GAAAAGCTCAATGTCCTACT---GAGCATGGGCAGCAACACCTTCAC------------TGAGGGGTGAGGGCTGG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171866259 61 + 173848474 GAAAAGCTCAATGTCCTACT---GAGCATGGGCAGCAACACCTTCAC------------TGAGGGGTGAGAGCTGG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11552611 61 - 12463322 GAAAAGCTCAATGTCCTACT---GAGCATGGGCAGCAACACCTTCAC------------TGAGGGGTGAGAGCTGG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156383013 61 + 157873769 GAAAAGCTCAGTGTCCTACT---GAGCATGTGTAGCAACATCTTCGC------------TGAGGGGTGAGAGCTGG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170410413 64 + 172585720 GAAACGCTCAATGTTCTACT---GCGCATGCACAGCAAGGCCTCCACTGA---------TGAGGGGTGAGAGCTGG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169153695 64 - 170955103 GAAAAGCTCAATGTTCTACT---GCGCATGCACAGCAAGGCCTCCACTGA---------TGAGGGGTGAGAGCTGG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8439582 64 + 10161646 GAAAAGCTCAATGTTCTACT---GCGCATGCACAGCAAGGCCTCCACTGA---------TGAGGGGTGAGAGCTGG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1470762 73 + 3144229 GAAAAGCTCAATGTTCTACT---GCGCATGCGCAGCAAGACCTTCACTGAGCCCTTCACTGAGGGGTGAGAGCTGG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96755128 61 + 98384682 GAAAAGCTCAATGTCCTACT---GCGCATGCGCAGCGAGACCTTCACT------------GAGGGGTGAGCGCTGG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8322636 72 - 10857215 GAAACGCTCAATGTTCTACT---GCGCATGCGCAGCGAGACCTTCACTGAGACCTTCA-CGAGGGGTGAGAGCTGG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15677348 61 - 23502949 gaaaaGCTCAATGTCCTACT---GTGCATGCGCAGCAAGACCTTCAC------------TGGGGGGTGAGAACTGG i colAng1.NW_012114488v1 I 260 C 0 s calJac3.chr4 169966050 61 + 171630274 GAAAAGCTCAAGGTCCTGGG---GAAGATGTGCAGCAGCACCTTCAC------------AGAGGGGTGAGCGCTGG i calJac3.chr4 C 0 I 566 s cebCap1.NW_016107695v1 1330368 61 - 2164891 GAAAAGCTCAATGTCCTGGG---GAAGATGTGCAGCAGCACCTTCAC------------AGAGGGATGAGAGCTGG i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1577613 61 - 1813869 GAAAAGTTCAATGTCCTGGG---GAAGATGTGCAGCAGCACCTTCAC------------AGAGGGGTGAGAGCCGG i aotNan1.NW_018494782v1 C 0 C 0 s canFam3.chr1 56233761 63 + 122678785 GCACAGCATGCTTTCTTGCTAGAGAGGATGCA-AGTGCCCCTTTTGC------------TTTGGAGCAATAACTGT i canFam3.chr1 I 1 C 0 s dasNov3.JH569188 664191 52 + 760995 GAAAAACCTACTGTCTTGCT---A---------AATAGGATGCTTAC------------TTTGGGGTGATAACCAT i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10997265 5995 - 12073884 I e saiBol1.JH378287 1361161 3627 - 2905041 I a score=22625.000000 s hg38.chr6_KB021644v2_alt 177939 3 + 185823 AGT s panTro5.chr6 173640907 3 + 175400573 AGT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171866320 3 + 173848474 AGT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11552672 3 - 12463322 AGT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156383074 3 + 157873769 AGT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170410477 3 + 172585720 AGT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169153759 3 - 170955103 AGT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8439646 3 + 10161646 AGT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1470835 3 + 3144229 AGT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96755189 3 + 98384682 AGT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8322708 3 - 10857215 AGT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15677409 3 - 23502949 AGT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169966677 3 + 171630274 AGT i calJac3.chr4 I 566 C 0 s cebCap1.NW_016107695v1 1330429 3 - 2164891 AGT i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1577674 3 - 1813869 AGT i aotNan1.NW_018494782v1 C 0 I 642 s canFam3.chr1 56233824 1 + 122678785 --T i canFam3.chr1 C 0 I 3 s dasNov3.JH569188 664243 2 + 760995 AC- i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10997265 5995 - 12073884 I e saiBol1.JH378287 1361161 3627 - 2905041 I a score=-8458.000000 s hg38.chr6_KB021644v2_alt 177942 1 + 185823 -G s panTro5.chr6 173640910 1 + 175400573 -G i panTro5.chr6 C 0 C 0 s panPan2.chr6 171866323 1 + 173848474 -G i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11552675 1 - 12463322 -G i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156383077 1 + 157873769 -C i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170410480 1 + 172585720 -C i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169153762 1 - 170955103 -C i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8439649 1 + 10161646 -C i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1470838 1 + 3144229 -C i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96755192 1 + 98384682 -C i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8322711 1 - 10857215 -C i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15677412 1 - 23502949 -G i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169966680 1 + 171630274 -T i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1330432 1 - 2164891 -C i cebCap1.NW_016107695v1 C 0 C 0 s dasNov3.JH569188 664245 1 + 760995 A- i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10997265 5995 - 12073884 I e saiBol1.JH378287 1361161 3627 - 2905041 I e aotNan1.NW_018494782v1 1577677 642 - 1813869 I e canFam3.chr1 56233825 3 + 122678785 I a score=58073.000000 s hg38.chr6_KB021644v2_alt 177943 8 + 185823 GTGACTGA s panTro5.chr6 173640911 8 + 175400573 GTGACTGA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171866324 8 + 173848474 GTGACTGA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11552676 8 - 12463322 GTGACTGA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156383078 8 + 157873769 GTGACTGA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170410481 8 + 172585720 GAGACTGC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169153763 8 - 170955103 GAGACTGC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8439650 8 + 10161646 GAGACTGC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1470839 8 + 3144229 GAGACTGC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96755193 8 + 98384682 GAGACTGC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8322712 8 - 10857215 CAGACTGC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15677413 8 - 23502949 GAGACTGC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169966681 8 + 171630274 GTGGCTGA i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1330433 8 - 2164891 CTGACTGA i cebCap1.NW_016107695v1 C 0 I 2426 s aotNan1.NW_018494782v1 1578319 8 - 1813869 GTGACTGA i aotNan1.NW_018494782v1 I 642 C 0 s canFam3.chr1 56233828 8 + 122678785 GTGATTGG i canFam3.chr1 I 3 C 0 s dasNov3.JH569188 664246 8 + 760995 GTGGCTAG i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10997265 5995 - 12073884 I e saiBol1.JH378287 1361161 3627 - 2905041 I a score=235634.000000 s hg38.chr6_KB021644v2_alt 177951 33 + 185823 ACCTCTGGGGT-GACGGCAGAGGCTGTCTGAGCT----------- s panTro5.chr6 173640919 33 + 175400573 ACCTCTGGGGT-GACGGCAGAGGCTGTCTAAGCT----------- i panTro5.chr6 C 0 C 0 s panPan2.chr6 171866332 33 + 173848474 ACCTCTGGGGT-GACGGCAGAGGCTGTCTAAGCT----------- i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11552684 33 - 12463322 ACCTCTGGGGT-GACGGTAGAGGCTGTCTAAGCT----------- i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156383086 33 + 157873769 ACCTCTGGGGT-GACAGCAGAGGCCGTCTAAGCT----------- i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170410489 33 + 172585720 ACCTCTGGGGT-GACGGCAGAGGCCGTCTAAGCT----------- i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169153771 33 - 170955103 ACCTCTGGGGT-GACGGCAGAGGCCGTCTAAGCT----------- i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8439658 33 + 10161646 ACCTCTGGGGT-GACGGCAGAGGCCGTCTAAGCT----------- i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1470847 33 + 3144229 ACGTCTGGGGT-GACGGCAGAGGCCGTCTAAGCT----------- i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96755201 33 + 98384682 ACATCTGGGGT-GACGGCAGAGGCCGTCTAAGCT----------- i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8322720 33 - 10857215 ACCTCTGGGGT-GACGGCAGAGGCCGTCTAAGCT----------- i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15677421 33 - 23502949 ACCTCTGGGGT-GACGGCAGAGGCCATCTAAGCT----------- i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169966689 33 + 171630274 AGTTCTGGGGG-GGTGGCAGAGGCTGTCTAAGGG----------- i calJac3.chr4 C 0 C 0 s aotNan1.NW_018494782v1 1578327 33 - 1813869 TGCTCTGGCGT-GATGGCACAGGCTATCTAAGGG----------- i aotNan1.NW_018494782v1 C 0 C 0 s canFam3.chr1 56233836 31 + 122678785 ATTTCCAGGTG-GAAGAC--CAGTAGTTTAGATT----------- i canFam3.chr1 C 0 I 5 s dasNov3.JH569188 664254 39 + 760995 ATCTCTGAGGTGGAAGGCAAAGG------AAGCTTGTTTCAAGGG i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10997265 5995 - 12073884 I e saiBol1.JH378287 1361161 3627 - 2905041 I e cebCap1.NW_016107695v1 1330441 2426 - 2164891 I a score=3374494.000000 s hg38.chr6_KB021644v2_alt 177984 403 + 185823 GTATATCCAGATGCACAGTTTTAACACCTGCAAGAATGCAATCTGCATCACAGCT--GCCCAGGCCTG-GGTCCTGCTGCActtccacttccacgagagacatgcaggggcc--agctggggctggacaaggggagatgggtggatgaca-------------------------------------------------------gacagtgctctccactgacagtcctctacccctgaccacctagacccactgactg----gca----gttatcactcctgcttttatttcctttgg----gataagttctttcccaggaggctcctagattctttttcaaaca-agattttagcaggcgcctcccatcaatctttcagatacatttggatgtgtatgag-cccagctgaggcttgagtgaagacggccactacCC----TGCACGTCCT--AGCACCAGAGACTTATGTCAGAGCTCCT s panTro5.chr6 173640952 402 + 175400573 GTATATCCAGATGCACGGTTTTAACACCTGCAAGAATGCAATCTGCATCACAGCT--GCCCAGGCCTG-GGTCCTGCTGCActtccacttccacgagaggcatgcaggggcc--agctggggctggacaaggggagatgggcggatgaca-------------------------------------------------------gacagtgctctccactgacagtcctccacccctgaccacctagacccactgactg----gca----gttatcactc-tgcttttatttcctttgg----gataagttctttcccaggaggctcctagattctttttcaaaca-agattttagcagacgcctcccatcaatctttcagatacatttggatgtgtacgag-cccagctgaggctcgagtgaagacggccactacCC----TGCACGTCCC--AGTACCGGAGACTTATGTCAGAGCTCCT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171866365 402 + 173848474 GTATATCCAGATGCACGGTTTTAACACCTGCAAGAATGCAATCTGCATCACAGCT--GCCCAGGCCTG-GGTCCTGCTGCActtccacttccacgagaggcatgcaggggcc--agctggggctggacaaggggagatgggcggatgaca-------------------------------------------------------gacagtgctctccactgacagtcctccacccctgaccacctagacccactgactg----gca----gttatcactc-tgcttttatttcctttgg----gataagttctttcccaggaggctcctagattctttttcaaaca-agattttagcagacgcctcccatcaatctttcagatacatttggatgtgtacgag-cccagctgaggctcgagtgaagacggccactacCC----TGCACGTCCC--AGTACCGGAGACTTATGTCAGAGCTCCT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11552717 403 - 12463322 GTATATCCAGATGCACAGTTTTAACACCTGCAAGAATGCAATCTGCATCACAGCT--GCCCAGGCCTG-GGTCCTGCTGCActtccacttccacgagaggcatgcaggggcc--agctggggctggacaaggggagatgggcagatgaca-------------------------------------------------------gacagtgctctccactgacagtcctccacccctgaccacctagacccactgactg----gca----gttatcactcctgcttttatttcctttgg----gataagttctttcccaggaggctcctagattatttttcaaaca-agattttagcaggtgcctcccatcaatctttcagatacatttggatgtgtatgag-cccagctgaggctcgagtggagacggccactacCC----TGCACGTCCT--AGCACCAGAGACTTATGTCAGAGCTCCT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156383119 457 + 157873769 GTATATCCAGATGCACAGTTTTAACACCTGCAAGAATGCAATCTGCATCACAGCT--GCCCAGGCCTG-GATGCTGCTGCACTTCCACTTCCACGAGAGGCATGCAGGGGCC--AGCTGGGGCTGGACAAGGGGAGACAGACACATGACAGACACCAGAGGCATGCAGGGGccagctggggctggagaaggggagatgggcagatgacagcgttctccactgacaatcctccacccctgaccacctagacccactgactg----gca----gttatcactcctgcttttatttcctttgg----gataagttctttcccaggaggctcctagattctttttcaagca-agattttagcaggcgcctcccatcgatc-ttcagatacatttggatgtgtatgag-cccagctggagctggagttaagatggccactacCC----TGCATGTCCT--AGCACCAGAGACTTATGTCAGAGCTCCT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170410522 387 + 172585720 GTATATCCAGATGCACAGTTTTAACACCTGCAAGAACGCAATCTCCATCACAGCT--GCCCAGGCCTG-GGTCCCGCTGCActtccgcttccaggagaggcatgcaggagcc--agctggggctggccaaggggagacgggcaggagaca-------------------------------------------------------gacagcgctcgccactgacgatgctccacccctgaccacctagacccctcgactg----gca----gttatcactcctgctgttatttcctttgg----gatacgttctttcccaggaggctcctagattctttttcaagca-agattctagcaggcgcctcccatcaatctttcagatacatttggatgtgtatgac-cccagctggggctcg----------------aCCC----TGCACGTCCT--AGCACCAGAGACTTATGTCAGAGCTCCT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169153804 386 - 170955103 GTATATCCAGATGCACAGTTTTAACACCTGCAAGAACGCAATCTCCATCACAGCT--GCCCAGGCCTG-GGTCCCGCTGCACTTGcgcttccaggagaggcatgcaggagcc--agctggggctggccaa-ggaagaaggggaggagaca-------------------------------------------------------gacagcgctcgccactgacgatgctccacccctgaccacctagacccctcgactg----gca----gttatcactcctgcttttatttcctttgg----gatacgttctttcccaggaggctcctagattctttttcaagca-agattctagcaggcgcctcccatcaatctttcagatacatttggatgtgtatgac-cccagctggggctcg----------------aCCC----TGCACGTCCT--AGCACTAGAGACTTATGTCAGAGCTCCC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8439691 386 + 10161646 GTATATCCAGATGCACAGTTTTAACACCTGCAAGAACGCAATCTCCATCACAGCT--GCCCAGGCCTG-GGTCCCGCTGCACTTGcgcttccaggagaggcatgcaggagcc--agctggggctggccaa-ggaagaaggggaggaggca-------------------------------------------------------gacagcgctcgccactgacgatgctccacccctgaccacctagacccctcgactg----gca----gttatcactcctgcttttatttcctttgg----gatacgttctttcccaggaggctcctagattctttttcaagca-agattctagcaggcgccttccatcaatctttcagatacatttggatgtgtatgac-cccagctggggctcg----------------aCCC----TGCACGTCCT--AGCACTAGAGACTTATGTCAGAGCTCCC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1470880 387 + 3144229 GTATATCCAGATGCACAGTTTTAACACCTGCAAGAACGTAATCTCCATCACAGCT--GCCCAGGCCTG-GGTCCCGCTGCActtccgcttccaggagaggcatgcaggagcc--agctggggctggccaaggggagacgggcaggagaca-------------------------------------------------------gacagcgctcgccactgacgatgctccacccctgaccacctagacccctcgactg----gca----gttatcactcctgcttttatttcctttgg----gatacgttctttcccaggaggctcctagattctttttcaagca-agattctagcaggcgcctcccatccatctttcagatacatttggatgtgtatgac-cccagctggggctcg----------------aCCC----TGCACGTCCT--AGCACCAGAGACTTATGTCAGAGCTCCT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96755234 387 + 98384682 GTATATCCAGATGCACAGTTTTAACACCTGCAAGAACGCAATCTCCATCACAGCT--GCCCAGGCCTG-GGTCCCGCTGCActtccgcttccaggagaggcatgcaggagcc--agctggggctggccaaggggagacgggcaggagaca-------------------------------------------------------gacagcgctcgccactgacgatgctccacccctgaccacctagacccctcgactg----gca----gttatcactcctgcttttatttcctttgg----gatacgttctttcccaggaggctcctagattctttttcaagca-agattctagcaggcgcctcccatcaatctttcagatacatttggatgtgtatgac-cccagctggggctcg----------------aCCC----TGCACGTCCC--AGCACCAGAGACTTATGTCAGAGCTCCC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8322753 387 - 10857215 GTATATCCAGATGCACAGTTTTAACACCTGCAAGAACGCAATCTCCATCACAGTT--GCCCAGGCCTG-GGTCCCGCTGCActtccgcttccaggagaggcatgcaggagcc--agctggggctggccaaggggagacgggcaggagaca-------------------------------------------------------gacagcgctggccactgacgatgctccacgcctgaccacctagacccctcgactg----gca----gttatcactcctgcttttatttcctttgg----gatacgttctttcccaggaggctcctagattctttttcaagca-agattctagcaggcgcctcccatccatctttcagatacatttggatgtgtatgac-cccagctggggctcG----------------ACCC----TGCACGTCCT--AGCACCAGAGACTTATGTCAGAGCTCCT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15677454 403 - 23502949 GTATATCCAGATGCACAGTTTTAACACCTGCAAGAACGCAATCTCCATCAGAGCT--GCCCAGGCCTG-GGTCCCGCTGCACTTGcgcttccaggagaggcatgcaggagcc--agctggggctggccaaggggagacgggcaggagaca-------------------------------------------------------gacagtgctctccactggcgatgctccacccctgaccacctagacccctcgactg----gca----gttatcattcctgcttttatttcctttgg----gatacgttctttcccaggaggttcctagattctttttcaagca-agattctagcaggcgcctcccatcaatctttcagatacctttggatgtgtatgac-cccagctggggctcgagttaagacggccactacCC----TGCACGTCCT--AGCACCAGAGACTTACGTCAGAGCTCCC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169966722 403 + 171630274 GTACATCCAGATGCACAGTTTTAGCACCTGCAAGATCACAGTCTCCATCGGAGCT--GCCCAGGCCTG-GGTGCTGCTGCACTTTCGCTTCTGAGAGAGGCACTCAGGGGcc--agctggtgctggacgagaggcgatggacagatgaca-------------------------------------------------------gacagtgctctccgctgacaatcttcc-cccttggccacctgaa-ccactgactg----gca----gttatcactcctgctttcatttcctttgg----gacaagttctttcctgggaggttcctagattctctttcaagca-gcattttagcaggtacctcccatccatctttcagacgcactcggatgtctatgag-ctcagctggggcctgagttaaggcagccactacCC----TGCACGTCCCTATGCACCAGAGACTTATGTCACACTTCCT i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1332867 405 - 2164891 GTACATCCAGATGCACTGTTTTAGCACCTGCAAGAAAGCAGTCTCCATCACAGCT--GCCCAGGCCTG-GGTCCTGCTGCACTTCCGCTTCTGAGAGAGGCACTC--GGGcc--agctggggctggacgaggtgagacagacagatgaca-------------------------------------------------------gacagtgctctccactgacaagcctccacccttggccacctgga-ccactgactg----gca----gttatcactcctgctttcatttcctttgggacagacaagttctttcctgggaggtacctagattctctttcaaaca-gtattttagcaggtgcctcccatccatctttcagacacactcagatgtgtatgag-cccagct-gggcctgagttaaggcggccactacCC----TGCATGTCCTTAAGCACCAGAGACTTATGTCACACTTCCT i cebCap1.NW_016107695v1 I 2426 C 0 s aotNan1.NW_018494782v1 1578360 400 - 1813869 GTACATACAGATGCACCGTTTTAGCACCTGCAAGAATGCAGTCTCCATCACAGCT--GCCCAGGCCTG-GGTCCCACTGTACTTCCACTTCTAAGAGAGGCACTC-GGGGCC--AGCTGG-GCTGGACGAGGGGAGATGGGCAGATGACA-------------------------------------------------------GACAGCGCTCTCCACTGGCAATCCGCCAGCCTTGGCCAGCTGGA-CTGCTGACTG----GCA----GTTATCACTCCTGCTTTCATttcctttgg----gacaagttctttcctgggaggttcctagat--tctttcaagtg-acattttagcaggtgcctcccatccatctttcagacacacttgaatgtgtatgag-cccagctggggcctgagttaaggcggccactaACC----TGCATGTCCATAAGCACCAGAGACTTAGGTCACACTTTCT i aotNan1.NW_018494782v1 C 0 C 0 s canFam3.chr1 56233872 396 + 122678785 TTATGTTCA-ATGTAGGGCTCTAACATTTGCA----TGCAGTCTCTGTACCAACT--ATCTCCACCTTCGCTCATGCAGCACTTCTGCTCCCAC-AAAGGCAGGCGTGAGTG--CAAGTAGGCTAAACAAGGGAAACACATCA--TGGCA-------------------------------------------------------G--AGCTTTCATACCTGGAGATAACCTGCCCCAG-CTACCTAGACCTGCTCACCA----GGACTTGGttatcatgcttggtttcacctcttttgg----ttcaa-ttttcttccaagaggtactcaaactctcttccaaaag-cgattttaacagactcatcccattgattttctagatatggttggttgtgtctgaattccagatgatgctca-attaggaccaccattacaC----TGCATATGTG--AGCACCAGAGGCTTGTTCCAGAGTTCCT i canFam3.chr1 I 5 I 6455 s dasNov3.JH569188 664293 394 + 760995 ATATATTAAAGTGCAATGTTTTAACATTTGCAAGACTATA--CTCCATCACAGCCCATTTTAGTCTTC-TATCACATAACGcttctgcttccaaaaggatcaagcatgagtccaatatggagtaggacaaaggacaatgtatgaatgttg-------------------------------------------------------atttgcaccatc----------------tcccagattatttagacctacttactgtaacaaa----attatcatgcctctctttatttcctttgg----gttaagttctctcagagtagatactcaaaccttcattcaaatacactttttagccagctgactttatcagttttccaaaagtgctctaatatgcctggt-cccagataccactcaaattcggactcctgctacaCCATATACACTAACT--AACACCAGagacttttttt----ttttt i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 10997265 5995 - 12073884 I e saiBol1.JH378287 1361161 3627 - 2905041 I a score=79653.000000 s hg38.chr6_KB021644v2_alt 178387 8 + 185823 TGAAGATT s panTro5.chr6 173641354 8 + 175400573 TGAAGATT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171866767 8 + 173848474 TGAAGATT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11553120 8 - 12463322 TGAAGATT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156383576 8 + 157873769 TGAAGATT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170410909 8 + 172585720 TGAAGATT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169154190 8 - 170955103 TGAAGATT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8440077 8 + 10161646 TGAAGATT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1471267 8 + 3144229 TGAAGATT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96755621 8 + 98384682 TGAAGATT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8323140 8 - 10857215 TGAAGATT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15677857 8 - 23502949 TGAAGATT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169967125 8 + 171630274 CAAAGATT i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1333272 8 - 2164891 CAAAGATT i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1578760 8 - 1813869 CGAAGATT i aotNan1.NW_018494782v1 C 0 C 0 s dasNov3.JH569188 664687 8 + 760995 taaagatt i dasNov3.JH569188 C 0 I 9804 e otoGar3.GL873575 10997265 5995 - 12073884 I e saiBol1.JH378287 1361161 3627 - 2905041 I e canFam3.chr1 56234268 6455 + 122678785 I a score=3303143.000000 s hg38.chr6_KB021644v2_alt 178395 411 + 185823 CCTAGCacccagagtgctcctaaactaacggtattccctggtttctaacagaagcaaatgcaaatcctctctgaagaagagcatttctttggcccattttgtatgtctgtgtagcagggcgaaccacaaagaagctaacgattaaaaattaccagaaaaacctgaaagagtggcaccaggaatgagagtcacagaaagcaaacCaaaaatgagcccaaggaaagagaatattaaaaataaccagacataattagaatagataacttttagaaataaaaaaaa-tcagtgaattaaaaactcaatagttgttaaaatgaatgacgagagaagtaaaatagaagatttctctgaagaaattacacagagatacccagaaatataatgagatggtaaatataaaagaggttaaga s panTro5.chr6 173641362 412 + 175400573 CCTAGCACCCAGAGTGCTCCTACACTAACGGTATTCCCTGGTTTCTAACAGAAGCAAATGCAAATCCTCTCTGAAGAAGAGCATTGCTTTGGCCCATTTTGTATGTCTGTGTAGCAGGGCGAACCACAAAGAAGCTCACGATTAAAAATTACCAGAAAAACCTGAAACAGTGGCACCAGGAATGAGAGTCACAGAAAGCAAACCaaaaatgagcccaaggaaagagaatattaaaaataaccagacataattagaataggtaacttttagaaataaaaaaaaatcagtgaattaaaaactcaatagttgttaaaatgaatgatgagagaagtaaaatagaagatttctctgaagaaattacacagagatacccagaaatataatgagctggtaaatatgaaagaggttaaga i panTro5.chr6 C 0 C 0 s panPan2.chr6 171866775 411 + 173848474 CCTAGCACCCAGAGTGCTCCTACACTAACGGTATTCCCTGGTTTCTAACAGAAGCAAATGCAAATCCTCTCTGAAGAAGAGCATTGCTTTGGCCCATTTTGTATGTCTGTGTAGCAGGGCGAACCACAAAGAAGCTCACGATTAAAAATTACCAGAAAAACCTGAAACAGTGGCACCAGGAATGAGAGTCACAGAACGCAAACCaaaaatgagcccaaggaaagagaatattaaaaataaccagacataattagaataggtaacttttagaaataaaaaaaa-tcagtgaattaaaaactcaatagttgttaaaatgaatgatgagagaagtaaaatagaagatttctctgaagaaattacacagagatacccagaaatataatgagctggtaaatataaaagaggttaaga i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11553128 412 - 12463322 CCTAGCGCCCAGAGTGCTCCTAAACTAACGGTATTCCCTGGTTTCTAACAGAAGCAAATGCAAATCCTCTCTGAAGAAGAGCATTTCTTTGGCCCATTTTGTATGTCTGTGTAGCAAGGTGAACCACAAAGAAGCTCACAATTAAAAATTACCAGAAAAACCTTAAACAGTGGCACCAGGAATGAGAGTCACAGAAAGCAAACCaaaaatgagcccaaggaaagagactattaaaaataaccagacataattagaatagataacttttagaaataaaaaaaaatcagtgaattaaaaactcaatagttgttaaaatgaatgatgagagaagtaaaatagaagatttctctgaagaaattacacagagatacccagaaatataatgagatggtaaatataaaagaggttaaga i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156383584 403 + 157873769 CATAGCGCCCagagtgctcctaaactaatagcattccctggtttctaacagaagcaaatgcaaatcctctctgaagaagagcatttcttcggcccattttgtatgtctgtgcagcaaggtgaaccacaaagaagctcacaattaaaaattacCAGAAAAACCTGAAAAAGTGGCAC---------GAGTCACAGAAACCAGACCAAAAACGAGCCCaaggaaagagactattaaaaataaccagacataattagaatagataacttttagaaattaaaaaaaatcagtgaattaaaaactcaatagttgttaaaatgaatgatgagagaagtaaaatagaagatttctctgaagaagttacacagagatacccagaaatataatgagatggtaaatataaaagaggttaaga i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170410917 407 + 172585720 CCTAGCG-CCGGAGTGCTCCTAAACTAAAGGTATTCCCTGGTTTCTAACAGAAGCAAATGCAAATCCTCTCCAAAGAAGAGCATTTCTTCGG-CCATTTTGTATGTCTGTGTAGCAAGGTGAACCACAAAGCAGCTCACAATTAAAAGTTACCAGAAAAACCCAAAAGAGTGGTACCAGAAATGACAGTCACAGAAACCAaatcaaaaatgagcccaaggaaagagactattaaaaataaccagacataattagaatagataacttttaggaaaaaaa-aa--tcagtgaattaaaaactctatggttgttaaagtgaatgatgagagaagtaaaatagaagatttctctgaagaaattacacagagatacccagaaatataatgagatggtaaatataaaagaggttaaga i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169154198 401 - 170955103 CCTAGCG-CCGGAGTGCTCCTAAACTAAAGGTATTCCCTGGTTTCTAACAGAAGCAAATGCAAATCCTCTCCAAAGAAGAGCATTTCTTCGG-CCATTTTGTATGTCTGTGTAGCAAGGCGAACCACAAAGCAGCTCACAATTAAAAGTTACCAGAAAAACCCGAAAAAGTGGCACCAGAAATGACAGTCACAGAAACCAaatcaaaaatgagcataaggaaagagactattaaacataaccagacataattagaatagataacttttagaaaaaaaa---------tcaattaaaaactcaatagttgttaaagtgaatgatgagagaagtaaaatagaagatttctctgaagaaattacacagagatacccagaaatataatgagatggtaaatataaaggaggttaaga i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8440085 401 + 10161646 CCTAGCG-CCGGAGTGCTCCTAAACTAAAGGTATTCCCTGGTTTCTAACAGAAGCAAATGCAAATCCTCTCCAAAGAAGAGCATTTCTTCGG-CCATTTTGTATGTCTGTGTAGCAAGGCGAACCACAAAGCAGCTCACAATTAAAAGTTACCAGAAAAACCCGAAAAAGTGGCACCAGAAATGACAGTCACAGAAACCAaatcaaaaatgagcataaggaaagagactattaaacataaccagacataattagaatagataacttttagaaaaaaaa---------tcaattaaaaactcaatagttgttaaagtgaatgatgagagaagtaaaatagaagatttctctgaagaaattacacagagatacccagaaatataatgagatggtaaatataaaggaggttaaga i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1471275 408 + 3144229 CCTAGCG-CCGGAGTGCTCCCAAACTAAAGGTATTCCCTGGTTTCTAACAGAAGCAAATGCAAATCCTCTCCAAAGAAGAGCATTTCTTCGG-CCATTTTGTATGTCTGTGTAGCAAGGCGAACCACAAAGAAGCTCACAATTAAAAGTTACCAGAAAAACCCAAAAGAGTGGTACCAGAAATGACAGTCACAGAAACCaaataaaaaatgagcccaaggaaagagactattaaaaataaccagacataattagaatagataacttttagggaaaaaaaaa--tcagtgaattaaaaactctatggttgttaaagtgaatgatgagagaagtaaaatagaagatttctctgaagaaattacacagagatatccagaaatataatgagatggtaaatataaaagaggttaaga i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96755629 408 + 98384682 CCTAGCA-CCGGAGTGCTCCTTAACTAAAGGTATTCCCTGGTTTCTAACAGAAGCAAACGCAAATCCTCTCCAAAGAAGAGCATTTCTTCGG-CCATTTTGTATGTCTGTGTAGCAAGGTGAACCACAAAGAAGCTCACAATTAAAAGTTACCAGAAAAACCCGAAAATGTGGCAACAGAAATGACAGTCACagaaaccaaatccaaaatgagcccaaggaaagagactattaaacataaccagacataattagaatagataacttttagggaaaaaaaaa--tcagtgaattaaaaactctatggttgttaaagtgaatgatgagagaagtaaaatagaagatttctctgaagaaattacacagagatacccagaaatataatgagatggtaaatataaaagaggttaaga i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8323148 408 - 10857215 CCTAGCA-CCGGAGTGCTCCTAAACTAAAGGTATTCCCTGGTTTCTAACAGAAGCAAATGCAAATCCTCTCCAAAGAAGAGCATTTCTTAGG-CCATTTTGTATGTCTGTGTAGCAAGGCGAACCACAAAGAAGCTCACAATTAAAAGTTTCCAGAAAAACCCAAAAGAGTGATACCAGAAATGACAGTCACAGAAACCAAAtaaaaaatgagcccaaggaaagagactattaaaaataaccagacataattagaatagataacttttagggaaaaaaaaa--tcagtgaattaaaaactctatggttgttaaagtgaatgatgagagaagtaaaatagaagatttctctgaagaaattacacagagatacccagaaatataatgagatggtaaatataaaagaggttaaga i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15677865 405 - 23502949 CCTAGAG-CCAGAGTGCTCCTACACTAAAGGTATTTCCTGGTTTCTAACAGAAGCAAATGCAAATCCTCCTCAAAGGAGAGCACTTCTTCGG-CCATTTTGTATGTCTGTGTAGCAAGGCGAACCACAAAGAAGCTCACAATTAAAAGTTACCAGAAAAACCCAAAAAAGTGGCACCAGAAATGACAGTCACAGAAACCAaatcaaaaatgagcccaaggaaagagattattaaaaataaccagacataattagaatagataacttttagaaaaaaaaaaa--tcagtgaattaagaactcaatagttgttaaagtgaacgatgagagaagtaaaac---agatttctctgaagaaattacacagagatacccagaaatataatgagatggtaaatataaaagaggttaaga i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169967133 397 + 171630274 CGTGGCacctagagtgctcctaaatgaaccctatcccctggtttctaacagaagcaaatgcaaatccactctgaagaagagcatttcatcggtccattttgtatgtctatgtagcaagtcaaaccataaataagctcacaattgaaagttaa---------ctgaaaacgtggcaccaggaatgagagtcaCAg-----aaaccaaaaatgagcccaaggaaagagactattaaaaataaccagatataattagaacagataacttttaaaagttaaa-aagatcactgaattaaaaactcaatagttgttaaaatgaataatgagagaagtaaaatagaagatttctgtgaagaaactacacaaggatgcctagaaatacaatgagatggtaaatgtaaaagaggtcaaga i calJac3.chr4 C 0 C 0 s cebCap1.NW_016107695v1 1333280 408 - 2164891 CGTGGCGCCTAGGGTGCTCCTAAATGAGCCCTCTTCCCTAGTATCTAACAGAAGCAAATGCAAATCCACTCTGAAGAAGAGCATTTCATCGGTCCGTTTTGTATGTCTGTGTAGCAAGTCAAACCATAAATAAGCTCACAATTGAAAGTTAACAGAAAAACCTGAAAAAGTGGCACCAGGAATGAGAGTTACAGAAAGCAAACCaaaaatgagcccaaggaaagagactattaaaaataaccagatataattagaatagataacttttaaaaattaaa----atcactgaattaaaaactcagtagttgttaaaatgaataatgagagaagtaaaatagaagatttctctgaagaaattacacaaagatacccagaaatataatgagatgttaaatataaaagaggttaaga i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1578768 410 - 1813869 CGTGGCACCTAGCGTGCTCCTAAATGAACCCTGCCCCCTGCTTTCTAACAGAAGCAAATGCAAATCCACTCTGAAGAAGAGCATTTTGTGGGTCCATTTTGTGTGTCTCTGTAGCAAGTCAAACCATAAATAAGCTCACAATTTATAGTTAACAGAAAAACCTGAAAAAGTGTCACCAGGAACGAGAGTCACAGAAACCAAACCAAAAATGAGCCCAAGGAAAGAGACTATTAAAAATACCCGGATATAATTAGAATAGATAAC--TTAAAAATTAAAAAAAATCACTGAATTTAAAACTCAATAGTTGTTAAAATGAATAATGAGAGAAATAAAATAGAAGATTTCTCTGAAGAAATTACACAAAGATACCCAGAAATATAATGAGATGGTAAATATAGAAGAGGTTAAGA i aotNan1.NW_018494782v1 C 0 I 24 e otoGar3.GL873575 10997265 5995 - 12073884 I e saiBol1.JH378287 1361161 3627 - 2905041 I e dasNov3.JH569188 664695 9804 + 760995 I e canFam3.chr1 56234268 6455 + 122678785 I a score=4667841.000000 s hg38.chr6_KB021644v2_alt 178806 646 + 185823 tatataaaaagtcaattgaaaaactctagcttaagtttaagctgtgccacagatgaaagagtaaagggaatggcatgaaagccatattatggaag-----aactaatactaagaaaataaaaaaa---tccacacttatgcatattctaataaaacttcagaacagcaaaaacaaagagaagatcttaaatgcagctacagagacatgagaaacatctctaatgaaataattcaactgcctgaagattagtgaacagaaacaatgagaattaggagacagaagaataaccttttccaagc--------------------------------------actgtaagaaaagaagtaccaactgaagatggtgtacctagcaaaattagcttcaagaattatagcaatataaagacattttagataacaaaaaactgagtcacctatagggagaacattattattaaatatagtgctaaatgattattttgaaggatttcagtaaggag-aaaataatcct----------------------acaaacaagtaagagaaaagagagtgataattatgtgactaaatgtaaacaaccataatgatata---aataataataaaataata---tatcttgggattttaaaagatatgcaactaaaatacaaggaaacaattgcaaataaattggaagaatggttagtgaaatgaaaatttcct s panTro5.chr6 173641774 650 + 175400573 tatataaaaagtcgattgaaaaactctagcttaagtttaagctgtgccacagatgaaagagtaaagggaatggcatgaaagccatattatggaag-----aactaatactaagaaaataaaaaaa--atccacatttatgcatattctaataaaacttcagaacagcaaaaacaaagagaagatcttaaatgcagctacagagacatgagaaacatctctaatgaaataattcaactgcccgaagattagtgaacagaaacaatgagaattaggagacagaagaataaccttttccaagc--------------------------------------actgtaagaaaagaagtaccaactgaagatggtgtacctagcaaaattagcttcaagaattatagcaatataaagacattttagataacaaaaaactgagtcacctatagggagaacattattattaaatatagtgctaaatgattattttgaaggatttcagtaaggag-aaaataatcct----------------------acaaacaagtaagagaaaagagagtgataattatgtgagtaaatgtaaacaaccataatgatata---aataataataaaataataatatatcttgggattttaaaagatatgcaactaaaatacaaggaaacaattgcaaataaattggaagaatggttagtgaaatgaaaatctcct i panTro5.chr6 C 0 C 0 s panPan2.chr6 171867186 687 + 173848474 tatataaaaagtcgattgaaaaactccagcttaagtttaagctgtgccacagatgaaagagtaaagggaatggcatgaaagccatattatggaag-----aactaatactaagaaaataaaaaaa---tccacatttatgcatattctaataaaacttcagaacagcaaaaacaaagagaagatcttaaatgcagctacagagacatgagaaacatctctaatgaaataattcaactgcccgaagattagtgaacagaaacaatgagaattaggagacagaagaataaccttttccaagctatatttccaagaattccaagttatatttccaagaataactgtaagaaaagaagtaccaactgaagatggtgtacctagcaaaattagcttcaagaattatagcaatataaagacattttagataacaaaaaactgagtcacctatagggagaacattattattaaatatagtgctaaatgattattttgaaggatttcagtaaggag-aaaataatcct----------------------acaaacaagtaagagaaaagagaatgataattatgtgactaaatgtaaacaaccataatgatata---aataataataaaataataatatatcttgggattttaaaagatatgcaactaaaatacaaggaaacaattgcaaataaattggaagaatggttagtgaaatgaaaatctccc i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11553540 646 - 12463322 tatataaaaagttgattgaaaaactctagcttaagtttaagctgtgccacagatgaaagagtaaagggaatggcatgaaagccatattatggaag-----aactaatactaagaaaataaaaaaa---tccacacttatgcatattctaataaaacttcagaacagcaaaaacaaagagaagatcttaaatgcagctacagagacatgagaaacatctctaatgaaataattcaactgcccgaagattagtgaacagaaacaatgagaattaggagacagaagaataaccttttcccagc--------------------------------------actgtaagaaaagaagtaccaactgaagatggtgtacctagcaaaattagcttcaagaattatagcaatataaagacattttagataac-aaaaactgagtcacctatagggagaacactattattaaatatagtgctaaatgattattttgaaggatttcagtaaggag-aaaataatcct----------------------acaaacaagtaagagaaaagaga--gataattatgtgactaaatgtaaacaaccataatgatata---aataataataaaataataatatatcttgggattttaaaagatatgcaactaaaatacaaggaaacaattgcaaataaattggaagaatggttagtgaaatgaaaatttcct i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156383987 647 + 157873769 tatataaaaagccgattgaaaaactctagcttaagttcaagctgtgccacagatgaaagagtaaagggaatggcgtgaaagccatattatggaag-----aactaatactaagaaaataaaa------tccacacttatgcatattctaataaaacttcagaacagcaaaaacaaagagaagatcttaaatgcagctacagagacgtgagaaacatctctaatgaaataattcaactgcctgaagatttgtgaacagaaacaatgcgaattaggagacagaagaatgaccttttccaagc--------------------------------------actgtaagaaaagaagtaccaactgaagatggtgtacctagcaaaattagcttcaagaattatagcaatataaagacattttagataacaaaaaactgagtcacctatagggagaacattattattaaatatagtgctaaatgattattttgaaggatttcagtaaggagaaaaataatcct----------------------aaaaacaattaagagaaaagagagtgataattatgtgactaaatgtaaacaaccataatgatata---aataataataaaataataatatatcttgggattttaaaagatatgcaactaaaatacaaggaaacaattgcaaataaattggaagaatggttagtgaaattaaaatttcct i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170411324 677 + 172585720 gatgtaaaaagtcgattgaaaaactctagcttcagtttaagctgagccacagatgaaagagtgaagggaatggtgtgaaagccatactatggaag-----aactaatagtaagaaaataaaaaagaaatccacacttatgcattttctaataaaacttcagaacagcaaaaacaaagagaagatcttaaatgcagctacagagacacgagaaacatctgcaatgaaataatttaactgccagaagatttgtgaacagaaacaatgagaattaggagacagaagaataaccttttccaagc--------------------------------------accgtaagaaaagaattaccagctgaggatggtgtacctagcaaaattagcttcaagaattacagcaatataaagacattttagataacaaaaaactaagtcacctatagggagaacattattataaagtatagcgctagaggattattttgaaggatttcagtaagaag-aaaataatcctagaatgaagatctgacatttaaaaaaaaaattaagagaaaagagagtgataattatgtgactaaatgtaaacaaccataatgatataaataacaataataaaataacaatgtatcttgggattaaaaaagatatgcaactaaaatacaaggaaacaactgcaaataaattggaagaatggttagtgaaattaaaatttcct i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169154599 677 - 170955103 ggtgtaaaaagtcgattgaaaaactctagcttcagtttaagctgagccacagatgaaagagtgaagggaatggtgtgaaagccatactatggaag-----aactaatagtaagaaaataaaaaagaaatccacacttatgcattttctaataaaacttcagaacggcaaaaacaaagagaagatcttaaatgcagctacagagacacgagaaacatctgtaatgaaataatttaactgccagaagatttgtgaacagaaacaatgagaattaggagacagaagaataaccttttccaagc--------------------------------------atcgtaagaaaagaattaccagctgaggatggtatacctagcaaaattagcttcaagaattacagcaatataaagacattttagataacaaaaaactaagtcacctatagggagaacattattataaagtatagcgctagaggattattttgaaggatttcagtaagaag-aaaataatcctagaatgaagatctggcatttaaaaaaaaaattaagagaaaagagagtgataattatgtgactaaatgtaaacaaccataatgatataaataacaataataaaataataatatatcttgggattaaaaaagatatgcaactaaaatacaaggaaacaattgcaaataaattgggagaatggttagtgaaattaaactttcct i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8440486 677 + 10161646 ggtgtaaaaagtcgattgaaaaactctagcttcagtttaagctgagccacagatgaaagagtgaagggaatggtgtgaaagccatactatggaag-----aactaatagtaagaaaataaaaaagaaatccacacttatgcattttctaataaaacttcagaacggcaaaaacaaagagaagatcttaaatgcagctacagagacacgagaaacatctgtaatgaaataatttaactgccagaagatttgtgaacagaaacaatgagaattaggagacagaagaataaccttttccaagc--------------------------------------atcgtaagaaaagaattaccagctgaggatggtatacctagcaaaattagcttcaagaattacagcaatataaagacattttagataacaaaaaactaagtcacctatagggagaacattattataaagtatagcgctagaggattattttgaaggatttcagtaagaag-aaaataatcctagaatgaagatctggcatttaaaaaaaaaattaagagaaaagagagtgataattatgtgactaaatgtaaacaaccataatgatataaataacaataataaaataataatatatcttgggattaaaaaagatatgcaactaaaatacaaggaaacaattgcaaataaattgggagaatggttagtgaaattaaactttcct i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1471683 676 + 3144229 gatgtaaaaagtcgattgaaaaactctagcttcagtttaagctgagccacagatgaaagagtgaagggaatggtgtgaaagccatactctggaag-----aactaatagtaagaaaataaaaaagaaatccacacttatgcattttctaataaaacttcagaacagcaaaaacaaagagaagatcttaaatgcagctacagagacacgagaaacatctgcaatgaaataatttaactgccagaagatttgtgaacagaaacaatgagaattaggagacagaagaataaccttttccaagc--------------------------------------accataagaaaagaattaccagctgaggatggtgtacctagcaaaattagcttcaagaattacagcaatataaagacattttagataacaaaaaactaagtcacctatagggagaacattattattaagtatagtgctagaggattattttgaaggatttcagtaagaag-aaaataatcctagaatgaagatctgacattt-aaaaaaaaattaagagaaaagagagtgataattatgtgactaaatgtaaacaaccataatgatataaataacaataataaaataataatgtatcttgggattaaaaaagatatgcaactaaaatacaaggaaacaactgcaaataaattggaagaatggttagtgaaattaaaatttcct i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96756037 668 + 98384682 gatgtaaaaagtcgattgaaaaactctagcttcagtttaagctgaggcacagatgaaagagtgaagcgaatggtgtgaaagccatattatggaag-----aactaatagtaagaaaataaaaaagaaatccatacttatgcattttctaataaaacttcagaacagcaaaaacaaagagaagatcttaaatgcagct------acatgagaaacatctgtaatgaaataattcaactgccagaagatctgtgaacagaaacaatgagaattaggagacagaagaataaccttttccaagc--------------------------------------actgtaagaaaagaattaccagctgaggatggtgtacctagcaaaattagcttcaagaattacagcaatataaagacattttagataacaaaaaactaagtcagctatagggagaac---attattaagtatagcgctagaggattattttgaaagatttcagcaagaag-aaaataatcctagaatgaagatctgacatttaaaaaaaaaattaagagaaaagagagtgataattatgtgactaaatgtaaacaaccctaatgatataaataacaataataaaataataatgtatcttgggatttaaaaagatatgcaactaaaatacaaggaaacaattgcaaataaattgcaagaatggttagtgaaattaaaatttcct i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8323556 676 - 10857215 gatgtaaaaagtcgattgaaaaactctagcttcagtttaagctgagccacagatgaaagagtgaagggaatggtgtgaaagccatactctggaag-----aactaatagtaagaaaataaaaaagaaatccacacttatgcattttctaataaaacttcagaacagcaaaaacaaagagaagatcttaaatgcagctacagagacacgagaaacatctgtaatgaaataatttaactgccagaagatttgtgaacagaaacaatgagaattaggagacagaagaataaccttttccaagc--------------------------------------accataagaaaagaattaccagctgaggatggtgtacctagcaaaattagcttcaagaattacagcaatataaagacattttagataacaaaaaactaagtcacctatagggagaacattattattaagtatagtgctagaggattattttgaaggatttcagtaagaaa-aaaataatcctagaatgaagatctgacattt-aaaaaaaaattaagagaaaagagagtgataattatgtgactaaatgtaaacaaccataatgatataaataacaataataaaataataatgtatcttgggattaaaaaagatatgcaactaaaatacaaggaaacaactgcaaataaattggaagaatggttagtgaaattaaaatttcct i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15678270 677 - 23502949 gatgtaaaaagtcaattgaaaaactctagcttcagtttaagctgagccacagatgaaagagtgaagggaatgATGTGAAAGCCATACTATGGAAGTAAATAAATAATagtaagaaaataaaaaagaaatccacacgtacgcattttctaataaaacttcagaacagcaaaaacaaaaagaagatcttaaatgcagctacagagacatgagaaacatctgtaatgaaataattcaactgccataagatttgtgaacagaaacaatgagaattaggagacagaagaataaccttttccaagc--------------------------------------actgtaagaaaagaattaccagctgaggatggtgtacctagcaaaattagcttcaagaattacagcaatataaagacattttagataacaaaaaact-agtcacctatagggagaacattattattaagtataatgctagaggattattttgaaggatttcagtaagaag-aaaataatcctagaatgaagatctgacattt-aaaaaaaaattaagagaaaagagagtgacaattgtgtgactaaatgtaaacaaccagaatgatata---aacaataataaaataataatgtatcttgtgattaaaaaagatatgcaactaaaatacaaggaaacaattgcaaataaatgggaagaatggttagtgaaattaaaatttcct i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169967530 655 + 171630274 gccgtaaaaggttgcctgaagaactctaaCTTAGGTTAGACCTGTGCCGCAGAT-AAACAATGAAGGGAGTGGCGTGAAAGCCAGATTACGGAAG-----AACTGATAGTTagaaaac--agaagaaatccacatttgtgcatattctaataaaacttcagaacagcaaaaatgaagagaagatcttaaatgcagttacagagatgtgagaaacatctctaatgaaataattccactgccagaatatctgtgaacagaaacaatgagaattagaaggcagaagaataacattttccaagc--------------------------------------cctgtaaggaaagaatttccaactgagaaggatgtgcgtagcatgatcagcttcaagaa--agagcaatgtgaagacactgtaggtagc----aactgagtcacctgccaggagaac---attattaaatatagtgctaaatgattctatttaaggattttagtaaggag-aaaataatcctagaatgaagatctgaaattt--aaaaaaaattaagagacgagagagtgataattatttgtgtaaatataaacaaccataatgatata---aatgat-----aataataatatatgttgggatttaaaaagataagcaactaaaatacgaggaaaccattgcacataaattggaagaatggttagtgaagttaaaAttttct i calJac3.chr4 C 0 I 882 s cebCap1.NW_016107695v1 1333688 661 - 2164891 gatataaaaggttgattgaagaagtctagcttaagttaaagctatgcaacagatgaaaaaattaaaggaatggcataaaagccatattatggaag-----agctaatagtaagaaaacataaaagaaatccacatttgtgcatattctcatcaaacttcagaacagcaaaaataaagagaagatcttaaatgcagctacagagttatgagaaacatctcgaatgaaataattcaactgccagaatatttgtgaacagaaacaacgagaattagaagacagaagaataacattttccaagc--------------------------------------actgtaaagaaagaattaccaactgagaaggatgtacctagcataattagctgcaagaa--agagcaatataaagacatttcagataac-aaaaaccgagtcacctgccaggagaac---attattaaatatagtgctaaatgattatattaaaggattttagtaaggag-aaaataatcctagaatgaagatctgaaattt--taaaaaaattaagagagaatagagtgataattatttgagtaaatataaacaaccataatgatata---aatgat-----aatattaatatatcttgggatttaaaaagatatgcaactaaaatacaaagaaaccattgcacataaattggaagtatggttagtgaaattaaaattttct i cebCap1.NW_016107695v1 C 0 C 0 e otoGar3.GL873575 10997265 5995 - 12073884 I e saiBol1.JH378287 1361161 3627 - 2905041 I e aotNan1.NW_018494782v1 1579178 24 - 1813869 I e dasNov3.JH569188 664695 9804 + 760995 I e canFam3.chr1 56234268 6455 + 122678785 I a score=2044799.000000 s hg38.chr6_KB021644v2_alt 179452 313 + 185823 aatgccaaagtctagtcttcctcttgaaaaggtttaagttataga--tttcttttcttgtattttctttggtggttttggtatcaggataattctgagcttataaaataagttgaaaagttttccc-ctc-tttattttctggaagaggttgtataaaattgctgttagctcttctttaaatg-------tctgttagaatcctccagtgaaatcatgtgggcctgaaaatctctttttgggagatttttagttaggcttcgatgt-ctttaatgtttataaaactcttccaattatctatttcatcttggttgagatttttcag s panTro5.chr6 173642424 313 + 175400573 aatgccaaagtctagtcttcctcttgaaaaggtttaagttataga--tttcttttcttgtattttctttggtggttttggtatcaggataattctgagcttataaaataagttgaaaagttttccc-ctc-tttattttcttgaagaggttgtataaaattgctgttagctcttctttaaatg-------tctgttagaatcctccagtgaaatcatgtgggcctgaaaatctctttttgggagatttttagttaggcttcgatgt-ctttaatgtttataaaactcttccaattatctatttcatcttgtttgagatttttcag i panTro5.chr6 C 0 C 0 s panPan2.chr6 171867873 313 + 173848474 aatgccaaagtctagtcttcctcttgaaaaggtttaagttataga--tttcttttcttgtattttctttggtggttttggtatcaggataattctgagcttataaaataagttgaaaagttttccc-ctc-tttattttcttgaagaggttgtataaaattgctgttagctcttctttaaatg-------tctgttagaatcctccagtgaaatcatgtgggcctgaaaatctctttttgggagatttttagttaggcttcgatgt-ctttaatgtttataaaactcttccaattatctatttcatcttgtttgagatttttcag i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11554186 313 - 12463322 aatgccaaagtctagtcttcctcttgaaaaggtttaagttataga--tttcttttcttgtattttctttggtggttttggtatcaggataattctgagcttataaaataagttgaaaagttttccc-ctc-tttattttctggaagaggttgtataaaattgctgttagctcttctttaaatg-------tctgttagaatcctccagcgaaatcatgtgggcctgaaaatctctttttgggagatttttagttaggcttcgatgt-ctttaatgtttataaaactcttccaattatctatttcatcttggttgagatttttcag i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156384634 314 + 157873769 aaTGCCAAAGTCTACTCTTCCTCTTGAAAAGGTTCAAGTtataga--tttcttttcttgtattttctttggtggtcttggtatcaggataattctgagcttataaaataagttgaaaagttttccc-ctcttttattttctggaagaggttgtataaaattgctggtagctcttctttaaatg-------tctgttagaatcctccagtgaagtcatgtgggcctgaaaatctctttttgggagatgtttagttaggcttcaatgt-ctttaatgtttataaaactcttccaattatctatttcatcttggttgagatttttcag i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170412001 315 + 172585720 aaTGCCAAAGTCTAGTCTTCTCCTTGAAAAGGTTTCAGTGATAGA-ttttcttttcttgtattttctttggtggttttggtatcaggataattctgagcttataaaataagttgaaaagttttccc-ctcttctattttctggaagaggttgtataaaattgctgttagctcttctttaaatg-------tctgttagaatcctccagtgaaatcatgtgggcctgaaaatctctttttgggagatttttagttaggcttcaatgt-ctttaatgtttataaaactcttccagttatctatttcatcttggttgagatgtttcgg i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169155276 320 - 170955103 aaTGCCAAAGTCTAGTCTTCCCCTTGAAAAGGTTTCAGTGATAGA-ttttcttttcttgtgttttctttcgtggttttggtatcaggataattctgagcttataaaataagttgaaacgttttccc---cttttattttctggaagaggttgtataaaattgctgttagctcttctttaaagaagagaattctgttagaatcctccagtgaaatcatgtgggcctgaaaatctctttttgggagatttttagttaggcttcaatgt-ctttaatgtttataaaactcttccagttatctatttcatcttggttgagatgtttcgg i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8441163 322 + 10161646 aaTGCCAAAGTCTAGTCTTCCCCTTGAAAAGGTTTCAGTGATAGA-ttttcttttcttgtgttttctttcgtggttttggtatcaggataattctgagcttataaaataagttgaaacgttttccc-ctcttttattttctggaagaggttgtataaaattgctgttagctcttctttaaagaagagaattctgttagaatcctccagtgaaatcatgtgggcctgaaaatctctttttgggagatttttagttaggcttcaatgt-ctttaatgtttataaaactcttccagttatctatttcatcttggttgagatgtttcgg i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1472359 316 + 3144229 aaTGCCAAAGTCTAGTCTTCCCCTTGAAAAGGTTTCAGTGATGGATttttcttttcttgtattatctttggtggttttggtatcaggataattctgagcttataaaataagttgaaacgttttcct-ctcttttattttctggaagaggttgtataaaagtgctgttagctcttctttaaatg-------tctgttagaatcctccagtgaaatcatgtgggcctgaaaatctctttttgggagatttttagttaggcttcaatgt-ctttaatgtttataaaactcttccagttatctatttcatcttggttgagatgtttcag i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96756705 315 + 98384682 aaTGCCAAAGTCTAGTCTTCCCCTTGAAAAGGTTTCAGTGATAGA-ttttcttttcttgtattttctttggtggttttggtatcaggataattctgagcttataaaataagttgaaaagtttcccc-ctcttttcttttctggaagaggttgtatgaaattgctgttagctcttctttaaatg-------tctgttagaatcctccagtgaaatcatgtgggcctgaaaatctctttttgggagatttttagttaggcttcaatgt-ctttaatgtttataaaactcttccaattatctatttcatcttggttgagatgtttcgg i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8324232 316 - 10857215 aaTGCCAAAGTCTAGTCTTCCCCTTGAAAAGGTTTCAGTGATGGATttttcttttcttgtattatctttggtggttttggtatcaggataattctgagcttataaaataagttgaaacgttttcct-ctcttttattttctggaagaggttgtataaaagtgctgttagctcttctttaaatg-------tctgttagaatcctccagtgaaatcatgtgggcctgaaaatctctttttgggagatttttagttaggcttcaatgt-ctttaatgtttataaaactcttccagttatctatttcatcttggttgagatgcttcag i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15678947 315 - 23502949 aaTGCCAAAGTCTAGTCTTCCCCTTGAAAAGCTTTCAGTGATAGA-tttttttttcttgtattttctttggtggttttggtatcaggatagttctgagcttataacataagttgaaaagtttttcc-ctcttttattttctggaagaggttgtataaaattgctgttagctcttctttaaatg-------tctgttggaatcctccagtgaaatcatgtgggcctgaaaatctctttttgggagatttttagttaggcttcaatgt-ctttaatgtttataaaactcttccaattatctatttcatcttggttgagatgttttgg i colAng1.NW_012114488v1 C 0 C 0 s cebCap1.NW_016107695v1 1334349 309 - 2164891 aatgtcAAAGTCT-GTCATCCTCTTGAAAAGGTTTAAGTtataga--tttcttttcttgtattgtctttggtggttttggtactaggataattctgagcttataaagtaagttgaaaagtgttccctcacttctattttctggaagaggttgtataaaattgctgttaactcttctttaaatg-------tcttttagaatcctccagtgaaatcatgtgggcctcaaaatctctttttgggggatttttagttacgcttcaatgtattttaatgtttataaaact------attatctatttcatcttggtcgagaatttttaa i cebCap1.NW_016107695v1 C 0 I 317 e otoGar3.GL873575 10997265 5995 - 12073884 I e saiBol1.JH378287 1361161 3627 - 2905041 I e aotNan1.NW_018494782v1 1579178 24 - 1813869 I e calJac3.chr4 169968185 882 + 171630274 I e dasNov3.JH569188 664695 9804 + 760995 I e canFam3.chr1 56234268 6455 + 122678785 I a score=1375912.000000 s hg38.chr6_KB021644v2_alt 179765 194 + 185823 tttgtgattttcaaggaattggtttatttcttccaagt-gtcaaatttatgaacataaattggttgttgcagtcctttattttatttagatcatggtaggatctgtagtgatatcacttatttcactcctgatatttctggtttg-tatcttctcttttttcttttgtcagtattgctagagtctattaactttgt s panTro5.chr6 173642737 194 + 175400573 tttgtgattttcaaggaattggtttatttcttccaagt-gtcaaatttatgaacataaattggttgttgcagtcctttattttatttagatcatggtaggatctgtagtgatatcacttatttcactcctgatatttctggtttg-tatcttctcttttttcttttgtcagtattgctagagtctgttaactttgt i panTro5.chr6 C 0 C 0 s panPan2.chr6 171868186 194 + 173848474 tttgtgattttcaaggaattggtttatttcttccaagt-gtcaaatttatgaacataaattggttgttgcagtcctttattttatttagatcatggtaggatctgtagtgatatcacttatttcactcctgatatttctggtttg-tatcttctcttttttcttttgtcagtattgctagagtctattaactttgt i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11554499 194 - 12463322 tttgtgattttcaaggaattggtttatttcttccaagt-gtcaaatttatgaacataaattggttgttgcagtcctttattttatttagatcatggtaggatctgtagtgatatcacttatttcactcctgatatttctggtttg-tatcttctcttttttcttttgtcagtattgctagagtctattaactttgt i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156384948 187 + 157873769 tttgtgattttcaaggaattggtttatttcttccaagt-gtcaaatttatgaacataaattggttgttgcactcc-----tttatttagatcatggtaggatctgtagtgatatcatttatttcactcctgatatttctggtttg-tatcttctcttttttcttttgccagtattgct--agtctattaactttgt i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170412316 190 + 172585720 tttgtgattttcaaggaagtgatttatttcttctgagtggtcagacttatgaacataaattggttgttgcagtcctttattttatttagatcacggtaggatctgtagtgatatcacttattttactcctgatatttctggtttg-tatcctc-----tttcttttgtcagtcttgctagagtctgttaacttcgt i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169155596 190 - 170955103 tttgtgattttcaaggaagtgatttatttcttctgagtggtcagacttatgaacataaattggttgttgcagtcctttattttatttagatcacggtaggatctgtagtggtatcacttattttactcctgatatttctggtttg-tatcttc-----tttcttttgtcagtcttgctagagtctgttaacttcat i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8441485 190 + 10161646 tttgtgattttcaaggaagtgatttatttcttctgagtggtcagacttatgaacataaattggttgttgcagtcctttattttatttagataacggtaggatctgtagtggtatcacttattttactcctgatatttctggtttg-tatcttc-----tttcttttgtcagtcttgctagagtctgttaacttcat i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1472675 190 + 3144229 tttgtgattttcaaggaagtgatttatttcttctgagtggtcagacttatgaacataaattggctgttgcagtcctttattttatttagatcacggtaggatctgtagtgatatcacttattttactcctgatatttctggtttg-tatcttc-----tttcttttgtcagtcttgctagagtctgttaacttcgt i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96757020 191 + 98384682 tttgtgattttcaaggaagtgatttatttcttctgagtggtcagatttatgaacataaattggttgttgcagtcctttattttatttagatcagggtaggatctgtaatgatatcacttattttactcctgatatttctggtttgttatcttc-----tttcttttgtcagtcttgctagagtctgttaacttcct i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8324548 190 - 10857215 tttgtgattttcaaggaagtgatttatttcttctgagtggtcagacttatgaacataaattggctgttgcagtcctttattttatttagatcacggtaggatctgtagtgatatcacttattttactcctgatatttctggtttg-tatcttc-----tttcttttgtcagtcttgctagagtctgttaacttcgt i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15679262 186 - 23502949 tttgtgattttcaaggaagtgatttatttcttctgagtggtcagatttatgaacataaattggttgttgcagtcctttattttatttagatcacagtaggatctgtagtgatatcacttattttactcctgatatttctggtttg-tatcttc-----tttc----gtcagtcttgctagcctctgttaacttcgt i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169969067 194 + 171630274 tttgtgattttcgaggaaatggtttatttcttctaagaggtcaaatttatgaacataaattggttgttgcggtcccttattttatttagatccctgtagggtctgtagtgatatcacttattttactcctgatgcttctggtttg-tatagtc-tttgtttcttttgtcagtcttggtagagtttattaattttgt i calJac3.chr4 I 882 C 0 s cebCap1.NW_016107695v1 1334975 194 - 2164891 tttgtgattttcaaggaaatggtttatttcttctaagaggtcaaatttatgagcataaattggttgttgcagtcccttattttatttagatcactgtaggatctgtagtaatatcacttatcttactcctgatatttctggttta-tatcgtc-tttttttcttttgtcagtcttggtagattctattaattttat i cebCap1.NW_016107695v1 I 317 C 0 e otoGar3.GL873575 10997265 5995 - 12073884 I e saiBol1.JH378287 1361161 3627 - 2905041 I e aotNan1.NW_018494782v1 1579178 24 - 1813869 I e dasNov3.JH569188 664695 9804 + 760995 I e canFam3.chr1 56234268 6455 + 122678785 I a score=2433027.000000 s hg38.chr6_KB021644v2_alt 179959 307 + 185823 tgattttttttttgaaga---aacagctttaggttttgttaattttttctattaaatttctatttcagtttcacagattttgctccctattatttccttctatctacttgattttag-tttattttgttctact-tttctacttttttgaggcactcacttagataattgatttgagaccgttactgttttgtagtataagcaattcatgttatagatttccctcttagcactgctttag--c--tgctgcacatattttgaaatgctgtgttttcattttcattctattctatgtgtttcttaaacttttggaga s panTro5.chr6 173642931 305 + 175400573 tgatttttttt--gaaga---aacagctttaggttttgttaattttttctgttaagtttctaattcagtttcacagattttgctccatattatttccttctatctacttgattttag-tttattttgttctact-tttctacttttttgaggcactcacttagataattgatttgagaccgttactgttttgtagtataagcaattcatgttatagatttccctcttagcactgctttag--c--tgctgcacatattttgaaatgctgtattttcattttcattctattctatgtgttttttaaacttttggaga i panTro5.chr6 C 0 C 0 s panPan2.chr6 171868380 305 + 173848474 tgatttttttt--gaaga---aacagctttaggttttgttaattttttctgttaagtttctaattcagtttcacagattttgctccatattatttccttctatctacttgattttag-tttattttgttctact-tttctacttttttgaggcactcacttagataattgatttgagaccgttactgttttgtagtataagcaattcatgttatagatttccctcttagcactgctttag--c--tgctgcacatattttgaaatgctgtattttcattttcattctattctatgtgttttttaaacttttggaga i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11554693 306 - 12463322 tgatttttttt-tgaaga---aacagctttaggttttgttaattttttctgttaaatttctatttcagtttcacagattttgctccctattatttccttctatctacttgattttag-tttattttgttctact-tttctacttttttgaggcactcactcagataattgatttgagaccgttactgttttgtagtataagcaattcatgttatagatttccctcttagcactgctttag--c--tgctgcacatattttgaaatgctgtgttttcattttcattctattctatgtgttttttaaacttttggaga i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156385135 307 + 157873769 tgattattttt--gaaga---aacagctttaggttttgttaattttctctattaaatttctatttcagtttcacagattttgctccctactatttccttctatctacttgattttag-tttattttgttctact-tttctacttttttaaggcactcacttagataattgatttgagacttttactgttttgtagtataagcaattcatggtatagatttccctcttagcactgctttagctc--tgttgcacatattttgaaatactgtattttcattttcattctattctatgtattttttaaacttttggaga i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170412506 303 + 172585720 tgatttttttg---aaaa---aacagctttagatt---ttaagtttttctattaaatttctgttttggtttcacagattttgctccctattatttccttctatctacttgattttag-tttattttgttgtact-tttctacttttttgaggcattcacttagataattgatttgaaacctttactgttttgtagtataagcaattcatgttatagatttccctctcagcactgctttag--ctgtgttgcacatattttgaaatgctgtattttcattttcattctattctatgtattttttaaacctttggaga i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169155786 303 - 170955103 tgatttttttg---aaaa---aacagctttagatt---ttaattttttctattaaatttctgttttggtttcacagattttgctccctattatttccttctatctacttgattttag-tttattttgttttact-tttctacttttttgaggcattcacttggataattgatttgaaacctttactgttttgtagtataagcaattcatgttatagatttccctctcagcactgctttag--ctgtgttgcacatattttgaaatgctgtattttcattttcattctattctatgtattttttaaacctttggaga i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8441675 304 + 10161646 tgatttttttg--aaaaa---aacagctttagatt---ttaattttttctattaaatttctgttttggtttcacagattttgctccctattatttccttctatctacttgattttag-tttattttgttttact-tttctacttttttgaggcattcacttggataattgatttgaaacctttactgttttgtagtataagcaattcatgttatagatttccctctcagcactgctttag--ctgtgttgcacatattttgaaatgctgtattttcattttcattctattctatgtattttttaaacctttggaga i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1472865 303 + 3144229 tgatttttttg---aaaa---aacagctttagatt---ttaattttttctattaaatttctgttttggtttcacagattttgctccctattatttccttctatctacttgattttag-tttattttgttgtact-tttctacttttttgaggcattcacttagataattgatttgaaacttttactgttttgtagtataagcaattcatgttatagatttccctctcagcactgctttag--ctgtgttgcacatattttgaaatgctgtattttcattttcattctattctatgtattttttaaacctttggaga i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96757211 302 + 98384682 tgatctttttg----aaa---aacagctttagatt---ttaattttttctattaaatttctgtttcggtttcacagattttgctccctattatttccttctatctacttgattttag-tttattttgttgtact-tttctacttttttaaggcattcacttagataattgatttgaaacctttactgttttgtagtataagcaattcatgttatagatttccctctcagcactgctttag--ctgtgttgcacatattttgaaatgctgtattttcattttcattctactctatgtattttttaaacctttggaga i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8324738 298 - 10857215 tgatttttttg---aaaa---aacagctttagatt---ttaattttttctattaaatttctgttttggtttcacagattttgctccctattatttccttctatctacttgattttag-tttattttgttgtact-tttctacttttttgaggcattcactt-----attgatttgaaacctttactgttttgtagtataagcaattcatgttatagatttccctctcagcactgctttag--ctgtgttgcacatattttgaaatgctgtattttcattttcattctattctatgtattttttaaacctttggaga i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15679448 303 - 23502949 tgatttttttg---aaaa---aacagctttagatt---ttaattttttctattaaatttctgtttcggtttcacagattttgctccatattatttccttctatctacttgattttag-tttattttgttgtact-tttctacttttttgaggcattcacttagataattaatttgaaaccttaactgttttgtagtataagcaattcatgttatagatttccctcttagcactgctttag--ctgtgttgcacatattttgaaatgctgtattttcattttcattctattctatgtattttttaaacctttggaga i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169969261 304 + 171630274 tgatttttttt-tgaagaaacaacagctttaggttttattacctttttctattacatttctatttt-------cag--tttgcttcctactgtttccttctatctacttgatttctgttttattttgttctactgtttttgcttatttgaggcagtcacttagacaattgatctgagacctttactgttttgtagtataagcaattcatgttacagatcttcttctcagcactgcgttag--ctgtattgcacattttttgaaatgctgtattttcattttcattctattctatgtattttttaaacttttcaaga i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1364788 299 - 2905041 tGATTTttttt-tttaaga--aacagctttaggttttattaacgttttctgttacatttctatttt-------cag--tttgcttcct-ttatttctttctatctagttgatttttg-tttgttttgtacgact-tttttgcttatttgaggcagtcacttagataattgatctgagacctttaccgttttgtagtataaacaattcatgttatagatcttcttctcagcactgcgttaa--ctctattgcacatattttgaaatgctgtgttttcattttccttctattctatatattttttaaacttttcaaga i saiBol1.JH378287 I 3627 C 0 s cebCap1.NW_016107695v1 1335169 298 - 2164891 tgatttttttt-ttaaga---aacagctttaggttttattaactttttctattacatttctatttt-------cag--tttgcttcctattatttccttctatctacttgatttttg-tttatttt-taccact-tttttgcttatttgaggcagtcacttagataattgatctgagacctttactgttttgtcgtataaacaattcatgttatagatcttcttctcagcactgctttag--ctgcattgcacatattttgaaatgctgtagtttcattttcattctattccatgtattttttaaactttttaaga i cebCap1.NW_016107695v1 C 0 C 0 e otoGar3.GL873575 10997265 5995 - 12073884 I e aotNan1.NW_018494782v1 1579178 24 - 1813869 I e dasNov3.JH569188 664695 9804 + 760995 I e canFam3.chr1 56234268 6455 + 122678785 I a score=7655350.000000 s hg38.chr6_KB021644v2_alt 180266 805 + 185823 ctttttcttgacacgtggattatttaaaagtctgttgcttaatttccttatgtttaaatattttcctgttgatttttagtgattgatttctagttcgctttcattatgtcagataatagactatatgactacaatttttaaatgtattgaagtttgttttatgtctcaggatgtggtctatcttagtgaatgttccgtggacacctgtaaacatgtatatcctgctgttgtcataggcaatgtattgcttatgtcaattagatactgttaattgactgtg-ttattcagatcctatatatcctggctgtttttctgcttatttttcagttgctgagagagaggtattaaaatctacaaccataatgtttgattggtctatttctcctttcagttgttgat--tcatgtattttaaggtgctgttgtttggtgcatatacatttagaattattataacttcctggtagatttatctttttatcatttttgtactgtccctctttgtctctagtaatttcctttgctctgaagtcgactttattagatattaatagagtcacttctgatttttagattaatgctgcatggtctgtctttgttcatcctcctcctttcaaacgagccatataattgaatgtgaagtgagtttctaataaggtgcatataggtgagtggtattttctttatttactctgccaatctgtgtattttgattgatgtatttaggccattttcattttatataattattgatatattagggcttatctctgtttctgcgagcaacaattttctttctacttttctt s panTro5.chr6 173643236 805 + 175400573 ctttttcttgacacatggattatttaaaagtctgttgcttaatttccttatgtttaaatattttcctgttgatttttagttattgatttctagttcgctttcattatgtcagataatagactatatgactacaattttttaatgtattgaagtttcttttatgtctcaggatgtggtctatcttagtgaatgttccgtggacacctgtaaacatgtatatcctgctgttgtcatatgcaatgtattgcttatgtcaattagatactgttaattgactgtg-ttattcagatcctatatatcctggctgtttttctgcttatttttcagttgctgagagagaggtattaaaatctacaaccataatgtttgatttgtctatttctcctttcagttgttgat--tcatgtattttaaggcactgttgtttggtgcatatacatttagaattattataacttcctggtagatttatcttcttatcatttttgtactgtccctctttgtctctagtaatttcctttgctctgaagtcgcctttattagatattaatagagtcacttctgatttttagattaatgctgcatggtctgtctttgttcatcctcctcctttcaaactagccacataattgaatgtgaagtgagtttctaataaggtgcatataggtgagtggtattttctttatttactctgccaatctatgtattttgatggatgtatttaggccattttcattttatataattattgatatgttagggcttatctctgtttctgcgagcaacaattttctttctacttttctt i panTro5.chr6 C 0 C 0 s panPan2.chr6 171868685 805 + 173848474 ctttttcttgacacatggattatttaaaagtctgttgcttaatttccttatgtttaaatattttcctgttgatttttagttattgatttctagttcgctttcattatgtcagataatagactatatgactacaagtttttaatgtattgaagtttcttttatgtctcaggatgtggtctatcttagtgaatgttccgtggacacctgtaaacatgtatatcctgctgttgtcatatgcaatgtattgcttatgtcaattagatactgttaattgactgtg-ttattcagatcctatatatcctggctgtttttctgcttatttttcagttgctgagagagaggtattaaaatctacaaccataatgtttgatttgtctatttctcctttcagttgttgat--tcatgtattttaaggcactgttgtttggtgcatatacatttagaattattataacttcctggtagatttatcttcttatcatttttgtactgtccctctttgtctctagtaatttcctttgctctgaagtcgcctttattagatattaatagagtcacttctgatttttagattaatgctgcatggtctgtctttgttcatcctcctcctttcaaactagccacataattgaatgtgaagtgagtttctaataaggtgcatataggtgagtggtattttctttatttactctgccaatctatgtattttgatggatgtatttaggccattttcattttatataattattgatatgttagggcttatctctgtttctgcgagcaacaattttctttctacttttctt i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11554999 804 - 12463322 gtttttcttgacacatggattatttaaaagtctgttgcttaatttccttatgtttaaatattttcctgttgatttttagtgattgatttctagttctctttcattatgtcagataatagactatatgactacaatttttaaatgtattgaaggttgttttatgtctcaggatgtggtctatcttagtgaatgttccgtggacacctgtaaacatgtatatcctgctgttgtcatatgcaatgtattgcttatgtcaattagatactgttaattgactgtg-ttattcagatcctatatatcctggctgtttttctgctta-ttttcagttgctgagagagaggtattaaaatctacaaccataatgtttgattggtctatttctcctttcagttgttgac--tcatgtattttaaggcactgttgtttggtgcatatacatttataattattataacttcctggtagatttatctttttatcatttttgtactgtccctctttgtctctagtaatttcctttgctctgaagtcgactttattagatattaatagagtcacttctgatttttagattaatgctgcatggtctgtctttgttcatcctcctactttcaaactagccatataattgaatgtgaagtgagtttctaataaagtgcatataggtgagtggtattttctttatttactctgccaatctgtgtattttgattgatgtatttaggccattttcattttatataattattgatatgttagggcttatctctgtttctgcgagcaacaattttctttctacttttctt i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156385442 805 + 157873769 ctttttcttgacacatggattatttaaaagtctattgcttaatttccttatgtttaaagattttcctgttgatttttagttattgatttctagttcgctttcattatgtcagataatagactatatgactacaatttttaaatgtattgaggtttgttttatgactcaggatgtggtctatcttagtgaatgttccgtggacacctgtaaacatgcatatactgctgttgtcatatggaatgtattgcttatgtcaattagatactgttaattgattgtg-ttattcagatcctatatatcctggctgtttttctgcttatttttcagttgctgagagagaggtattaaaatctacaaccataatgtttgatttatctatttctcctttcagttgttgat--tcatgtattttaaggcgctgttgtttggtgcatatacatttagaattattataacttcctggtagatttatcttttcatcatttttgtactgtccctctttgtctctagtaattttctttgctctgaagttgactttattagatattaatagagtcacttctgatttttagattaatgctgcatggtcaatctttgttcatcctcctactttcaaactagccatataattgaatttgaagtgagtttctaataaagtgcatataggtgagtggtattttctttatccattctgccaatctgtgtattttgattgatgtatttaggccatttacattttatataattattgatatgttagggtttatctctgtttctgcgggcaacaattttctttctacttttctt i nomLeu3.chr3 C 0 I 730 s rheMac8.chr4 170412809 802 + 172585720 ctttttcctgacaaatggctcatttaaaagtctgtagtttaatttccttatgtttagagattttcctgttgatttttagttattcatttctagtttgctttcattatattagataatagactatatgactataatttttaaatgtattgaggtttgttttatgacttaggatgtggtctatcttagtgaatgctccgtggacacctgtaaacatgcatatcctgatgttgtcgtatggaatgtattgcttatgtcaattagatactg----ttgattgtgattattcagatcctatgtatcctggctggttttctgcttatttatcagttgctgacagagaggtattaaaatctacaaccataatgtttgatttgtctatttctcctttcagttgttgat--tcatgcattttaaggtgctgttgtttggtgcatatacatttagaattattataacttcctggtagatttatctttttatcatttttgtagtgtccctctttgtctctagtaattttctttgctctgaagtctactttattagatattaatagagtctcttctgatttttagattaatgttgaatggtctatctttgttcatccttctactttcaaactggccatataattgaatttaaagtgagttgctaataaagggcatataggtgagtggcattttctttatccactctgccaatctgtgtattttgattgatgtatttaggccatttacattttatataattattgatatgttagggcttatctctgTTTCCACGAgcaacaaatatctttctacttttctt i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169156089 806 - 170955103 ctttttcctgacaaatggctcatttaaaagtctgtagtttaatttccttatgtttagagattttcccgttgatttttagttattcatttctagtttgctttcattatgttagagaatagactatatgactataatttttaaatatattgaggtttgttttatgactcagtatctggtctatcttagtgaatgctccgtggacacctgtaaacatgcatatcctgctgttgtcgtatggaatgtattgcttatgtcaattagatactgttaattgattgtgattattcagatcctatgtatcctggctggttttctgcttatttatcagttgctgacagagaggtattaaaatctacaaccataatgtttgatttgtctatttctcctttcagttgttgat--tcatgcattttaaggtgctgttgtttggtgcatatacatttagaattattataacttcctggtagatttatctttttatcatttttgtagtgtccctctttgtctctagtaattttctttgctctgaagtctactttattagatattaatagagtctcttctgatttttagattaatgctgcatggtctatctttgttcatccttctactttcaaactggccatataattgaatttaaagtgagttgctaataaagggcatgtaggtgagtggcattttctttatccactctgccaatctgtgtattttgattgatgtatttaggccatttacactttatataattattgatatgttagggcttatctctgtttccacaagcaacttagatctttctacttttctt i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8441979 806 + 10161646 ctttttcctgacaaatggctcatttaaaagtctgtagtttaatttccttatgtttagagattttcccgttgatttttagttattcatttctagtttgctttcattatgttagagaatagactatatgactataatttttaaatatattgaggtttgttttatgactcagtatctggtctatcttagtgaatgctccgtggacacctgtaaacatgcacatcctgctgttgtcgtatggaatgtattgcttatgtcaattagatactgttaattgattgtgattattcagatcctatgtatcctggctggttttctgcttatttatcagttgctgacagagaggtattaaaatctacaaccataatgtttgatttgtctatttctcctttcagttgttgat--tcatgcattttaaggtgctgttgtttggtgcatatacatttaaaattattataacttcctggtagatttatctttttatcatttttgtagtgtccctctttgtctctagtaattttctttgctctgaagtctactttattagatattaatagagtctcttctgatttttagattaatgctgcatggtctatctttgttcatccttctactttcaaactggccatataattgaatttaaagtgagttgctaataaagggcatataggtgagtggcattttctttatccactctgccaatctgtgtattttgattgatgtatttaggccatttacactttatataattattgatatgttagggcttatctctgtttccacaagcaacttacatctttctacttttctt i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1473168 802 + 3144229 ctttttcctgacaaatggctcatttgaaagtctgtagtttaatttccttatgtttagagattttcccgttgatttttagttattcatttctagtttgctttcattatgttagataatagactatatgactataatttttaaatgtattgag----gttttatgactcaggatgtggtctatcttagtgaatgctccgtggacacctgtaaacatgcatatcctgctgttgtcgtatggaatgtattgcttaagtcaattagatactgttaattgattgtgattattcagatcctatgtatcctggctggttttctgcttatttatcagttgctgacagagaggtattaaaatctacaaccataatgtttgatttgcctatttctcctttcagttgttgat--tcatgcattttaaggtgctgttgtttggtgcatatacattcagaatgattataacttcctggtagatttatctttttatcatttttgtagtgtccctctttgtctctagtaattttctttgctctgaagtctactttattagatattaatagagtctcttctgatttttagattaatgctgcatggtctgtctttgttcatccttctactttcaaactggccatataatggaatttaaagtgagttgctaataaagggcatataggtgagtggcattttctttatccactctgccaatctgtgtattttgattgatgtatttaggccatttacactttatataattattgatatgttagggcttatctctggttccacaagcaacttatatctttctacttttctt i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96757513 804 + 98384682 ctttttcctgacaaatggctcatttaaaaatctgtagtttaatttccttatgttcagagattttcctgttgatttt--gttattcatttctagtttgctttcattatgtcagataatagactatatgactataatttttaaatgtattgaggcttgttttatgactcaggatgtggtctatcttagtgaatgctccgtggacacctgtaaacatgcatatcctgctgttgtcgtatggaatgtattccttatgtcaattagatactgttaattgattgtgattattcagatcctatgtatcctggctggttttctgcttatttatcagttgctgacagagaggtattaaaatctacaaccataatgtttgatttgtctatttctcctttcagttgttgat--tcatgcattttaaggtgctgttgtttggtgcatatagatttagaattattataacttcctggtagatgtatctttttatcatttttgtagtgtccctctttgtctctagtaattttctttgctctgaagtctactttattagatattaatagagtctcttctgatttttagattaatgctgcatggtctatctttgttcatccttctactttcaaactggccatataattgaatttaaagtgagttgctaataaagggcatataggtgagtggcattttctttatccactctgccaatctgtgtattttgattgatgtatttaggccatttacacttcatataattattgatatgttagggcttatctctgtttccacaagcaacttatatctttctacttttctt i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8325036 806 - 10857215 ctttttcctgacaaatggctcatttaaaagtctgcagtttaatttccttatgtttagagattttcctgttgatttttagttattcatttctagtttgctttcattatgtcagataatagactatatgactataatttttaaatgtattgaggtttgttttatgactcaggatgtggtctatcttagtgaatgctccgtggacacctgtaaacatgcatatcctgctgttgtcgtatggaatgtattgcttaagtcaattagatactgttaattgattgtgattattcagatcctatgtatcctggctggttttctgcttatttatcagttgctgacacagagttattaaaatctacaaccataatgtttgatttgtctatttctcctttcagttgttgat--tcatgcattttagggtgctgttgtttggtgcgtatacattcagaatgattataacttcctggtagatttatctttttatcatttttgtagtgtccctctttgtctctagtaattttctttgctctgaagtctactttattagatattaatagagtctcttctgatttttagattaatgctgcatggtctatctttgttcatccttctactttcaaactggccatataatggaatttaaagtgagttgctaataaagggcatataggtgagtggcattttctctatccactctgccaatctgtgtattttgattgatgtatttaggccatttacactttatataattattgatatgttagggcttatctctgTTTCCACAAGCAACTTATATCTTTCTACTTTTCTT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15679751 806 - 23502949 ctttttcctgacaaatggctcatttaaaagtctgtagtttaatttccttatgtttagagattttcctgttgatttttagttattcatttctagtttgttttcattatgtcagataatagactatatgactataatttttaaatgtattgaggtttgttttatgactcaggatgtggtctatcttagtgaatgctccgtggacacctgtaaacaggcatatcctgctgttgtcatatggaatgtattgcttatgtcaattagatactgttaattggttgtgattattcagatcctatgtatcctggccggttttctgcttatttaacagttgctgagagagaggtattaaaacctacagccataatgtttgatttgtctatttctcctttcagttgttgat--tcatgcattttaaggtgctattgtttggtgcatatacatttagaattattataacttcctggtagatttatctttttatcatttttgtagtgtccctctttgtctctagtaattttctttgctctgaagtctactttattagatattaatagagtctcttctgatttttagattaatgctgcatagtctatctttattcatacttctactttcaaactggccatataattgaatttaaagtgagttgctaataaagggcgtataggtgagtggcattttctttatccactctgccagtctgtgtattttgattgatgtatttaggccatttacattttatataattattgatatgttagggcttatctctgTTTCCATGAGCAACAAATATCTTTCTACTTTTCTT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169969565 800 + 171630274 cgttttcttgacacatggattatgt-aaagtctgttgctttatttccttatgtttagagagtttcctgttgagttttagttattgatttctagtttgccttcattatgtcagataatagactgtatgactacagtttttaaatgtattgaggtttgttttatgactcaggatgtggtctatcttggtgaatgctccgtggacacctgtaaacatgcacatcctgctgtcatcctgtggaatgcattgcttatgtcaattagatactgttaactgattgtg-ttgttgagatcctgtatatcctgactgtttttctgctta----tcagttgctgagagaaaggcattaaaatctacaaccat-acgttagatttgtctatttctcctttttgttgttcattataatgca-tttaaggctctgttgtttggtgcatatacattcagaattattataacttcctggtagatttatcattttctcattttcatgctgcccctctttgtctctagtaattgtctttgctctgaagtccactttattagatattactagagttacttcggagttttagattaatgctgtgtggtacatctttgttcatactcctactttcaaactagtcatataactgaatttgaagtgagtttctaataaagtgcatgtaggtgagtggtgttttctttatccactctgccaatatgtgtcttttgattgatatatttaggccattgatattttatgtaattattgatttgttggggcttatctctgtttctgtgagcaacaattttctttctactcttctt i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1365087 801 - 2905041 ctttttcttgacacatggattatat-aaagtctgttgcttaatttccttatgtttagagagtttgcagttgagttttagttattgatttctagtttgccttcattatgtcagataatagactgtatgactacaatttttaaatgtactgaggttcattttatgactcagaatgtggtctatcttagtaaatgctccgtggacacctgtaaacatgcatatcctgctgctgtcctatggaatgtattggttatgacaattagatactgttaacggattgtg-ttattcagatcctctatatgctagctgtttttctgctta----tcagttgctgagagagaggcattaaaatctataaccat-atgttagatttgtctatttctcctttttgttgttgattgtaacgtattttaagggtctgttgtttggtgcatgtacatttagaattattataacttcctggtagattaattgttttctcatttttgtgctgtccctctttgttgctagtaattttctttgctctgaagtccattttattagatattactagagtcacttctgagttttagattaatgctgcatgatgtgtctttgttcatattcttactttcaaactagccatataactgaatttaaagtgagtttctaataaagtgcatgtaggtgagtgttgttttctttatccactttgccaatctgtggcttttgattgatatatttaggccatttacattttatataattattgatacattggggcttatctctgtttctgtgagcaactattttctttctactcttctt i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1335467 798 - 2164891 ctttttcttgacacatggattatat-aaaatctgttgcttaatttccttgtgtttagagagtttcctgtt--gttttagttattgatttctagtttgccttcattatgtcagataatagactgtatgactacaatttttaaatgtactgaggtttgttttatgacttaggatgtggtctatcttagtgaatgctccgtggacacctgtaaacatgcatatcctgctgttgtcctatggaatgtattgcttatgtcaattagatactgttaactgatt-tg-ttattcagatgctatatatcctagctgtttttctgctta----tcagttgctgagagagaggcattaaaatctacaaccat-atgttagatttgtctatttctcctttttattgttgattataatgtcttttaagggtctgttgtttggtgcatatacatttagaattattataacttcctggtagatttaccattttctcatttttgtactgtccctctttgtctctaataattttctttgctctgaaatccacttcattagatattactagagtcacttctgagttttagattaatgctgcatggtatatctttgttcatactcctactttcaaactagccatataactgaatttaaagtgagtttctaataaagtgcatgtaggtgagtggtgttttctttatccactctgccaatctgtgtcttttgattgatatatttaggccatttacattttatataattattgatatgttggggcttatctctgTTTCTGTGAGCAACAATTTTCTTTCCACTCTTCTT i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1579202 789 - 1813869 ctttttcttgacacatggattatac-aacgtctgttgcttaatttccttatgtttagagagtttctttttgagtt----ttattgatttctagtttgccttcattatgtcagataatagactgtgtgactacaatttctaaatgtattgagg-----tttatgactcaggatgtggtgtatcttagtgaatgctccgtggacacctgtaaacatgcatatcctgctgttgtcctatggaatgtattgcttatgtcaattagacactgttaactgattgtg-ttgttcagatcctgtatatcctagctgtttctctgctta----tcggttgctgagagagaggcgttaaaatctacaaccat-atgttagatttgtctatttctcctttttgttgttgattataacgtattttaagggtctgttgtttggtgcgtatacatttagagttactgtaacttcctggtag-tttatcgtttgctcatttttgtactgtccctc--tgtctctagtaattttctttgctctgaagtccactttattagatgttactagagtcacgtctgagttttagattcatgctgcatggtatatctttgttcatactcctactttcaaactagtcatataactgaatttgaagtgagtttctaatgaagtgcatgtaggtgagtggtgttgtctttatccactctgccaatctgtgtcttttgattgatatatttaggccatttacattttatataattattgatatgttggggcttatctctgtttctgtgagcaacaattttctttctactcttctt i aotNan1.NW_018494782v1 I 24 C 0 e otoGar3.GL873575 10997265 5995 - 12073884 I e dasNov3.JH569188 664695 9804 + 760995 I e canFam3.chr1 56234268 6455 + 122678785 I a score=4399478.000000 s hg38.chr6_KB021644v2_alt 181071 476 + 185823 tcatctgagtatgtctttatttggagttgaaagttcttttcattcagcagttaaatggtatggga-aaaacaagaaaaaaa-tattgggctgcttctttctggctttcattatttcaggtgataaatcctttatattttaactgctgttcacctataggtaatgggtttctttctggccaatttcaagatgttttttctttgttttcaTTACCTACAGGTGTGTGTTGCGCTGTGGGATTCAGCTCGAATCGTCCTTCCCCCGTTAGTTGTGCACACATTAACTCAGCTAATCTGTGCAATGAGAAAAGCATGTCTAAATACGACTAAAGTTTTCAAAACCACCACGGCATGGAAAGTCAGTGATCCACAGATTAGAACAACATTCCATTGTAAAGCATCTCTAAGGAAAAGCATCCAAGATAAAAAGATAACAGCCTGAGAAAATGTTTGTAATAATGATGTTTATCACTTGCACAT s panTro5.chr6 173644041 474 + 175400573 tcatctgAGTATGTCT--Atttggtgttgaaagttcttttcattcagcagttaaatggtatggga-aaaacaagaaaaaaa-tattgggctgcttctttctggctttcattatttcagatgataaatcctttatattttaactgctgttcacctataggtaatgggtttctttctggccaatttcaagatgttttttctttgttttcaTTACCTACAGGTGTGTGTTGCGCTGTGGAATTCAGCTTGAATTGTCCTTCCCCCGTTAGTTGTGCACACATTAACTCAGCTAATCTGTGCAATGAGAAAAGCATGTCTAAATACGACTAAAGTTTTTAAAACCACCACGGCATGGAAAGTCAGTGATCCACAGATTAGAACAACATTCCATTGTAAAGCATCTCTAAGGAAAAGCATCCAAGATAAAAAGATAACAGCCTGAGAAAATGTTTGTAATAATGATGTTTATCACTTGCACAT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171869490 474 + 173848474 tcatctgAGTATGTCT--Atttggtgttgaaagttcttttcattcagcagttaaatggtatggga-aaaacaagaaaaaaa-tattgggctgcttctttctggctttcattatttcagatgataaatcctttatattttaactgctgttcacctataggtaatgggtttctttctggccaatttcaagatgttttttctttgttttcaTTACCTACAGGTGTGTGTTGCGCTGTGGAATTCAGCTTGAATTGTCCTTCCCCCGTTAGTTGTGCACACATTAACTCAGCTAATCTGTGCAATGAGAAAAGCATGTCTAAATACGACTAAAGTTTTTAAAACCACCACGGCATGGAAAGTCAGTGATCCACAGATTAGAACAACATTCCATTGTAAAGCATCTCTAAGGAAAAGCATCCAAGATAAAAAGATAACAGCCTGAGAAAATGTTTGTAATAATGATGTTTATCACTTGCACAT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11555803 475 - 12463322 tcatctgagtatgtctttatttggagttgaaagttcttttcattcagcagttaaatggtatggga-aaaacgag-aaaaaa-tattgggctgcttctttctggctttcattatttcagatgataaatcctttatattttaactgctgttcacctataggtaatgggtttctttctggccaatttcaagatgttttttctttgttttcaTTACCTACAGGTGTGTGTTGCGCTGTGGGATTCAGCTCGAATCGTCCTTCCCCCGTTAGTTGTGCACACATTAACTCAGCTAATCTGTGCAATGAGAAAAGCATGTCTAAATACGACTAAAGTTTTTAAAACCACCAAGGCATGGAAAGTCAGTGATCCATAGATTAGAACAACATTCCATTGTAAAGCATCTCTAAGGAAAAGCATCCAAGATAAAAAGATAACAGCCGGAGAAAATGTTTGTAATAATGATGTTTATCACTTGCACAT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156386977 476 + 157873769 tcatctgaGTATGTCTTTatttggggttgaaagttcttttcattcagcagttaaatggtatggga-aaaacaagaaaaaaa-tattgggctgcttctttctggctttcattatttcagatgataaatcctttatattttaactgctgttcacctataggtaatgggtttctttctggccaatttcaagatgttttttctttgttttcaTTACCAACAGGTATGTGTTGCACTGTGGGATTTGGCTCAAATCGTCCTTCCCTCGTTAGTTGTGCACACATTAACTCAGTTAATCTGTGCAATGAGAAAAGCATGTCTAAATATGACCAAAGTTTTTAAAACCACCAAGGCATGGAAAATCAGTGATCCACAGATTGGAACAACATTCCATTGTAAAGCATCTCTAAGGAAAAGCATCCAAGATAAAAAGATAACAGCCTGAGAAAATGTCTGTAATAATGATGTTTATCACTTGCACAT i nomLeu3.chr3 I 730 C 0 s rheMac8.chr4 170413611 477 + 172585720 tcatctgagtatgtctttatttggagttgaaagttcttttcattcagcggttaaatggtgtggggaaaaacaagaaaaaagctattgggctgcttctttctggctttcatcatttcacatgataaatcctttacattttaactgctgttcacctataggtaatgggtttctttctggtcaatttcaagatgctttttctttgCGTTCATTACCTACAGGTGTGTGTTGCGCTGTGGGATTCAGCTCAAATCATCCTTCCCCCGTTAGTTGTGCACACATTAACTCTGTTAATCTGTGCAATGAGGAAAGCACGTCTAGATAAGACTAACGTTTTTAAAACCACGAAGGCAT-GAAAGTCAGTGATCCACAGATTAGAACAACATTCCATTGTAAAGCATCTCTAAGGGAAAGCATCCAAGATAAAAAGATAACGGCCCGAGAAAATGTTTGTAATAATGACATTTATCACTTGTATAT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169156895 476 - 170955103 tCATCTGAGTATGTCTTTatttggagttgaaagttcttttcattcagcggttaaatggtgtgggg-aaaacaagaaaaaagctattgggctgcttctttctggctttcatcatttcagatgataaatccttcacattttaactgctgttcacctataggtaatgggtttctttctggtcaatttcaagatgctttttctttgtgttcaTTACCTACAGGTGTGTGTTGCGCTGTGGGATTCGGCTCAAATCGTCCTTCCCCCGTTAGTTGTGCACACATTAACTCTGTTAATCTGTGCAATGAGGAAAGCACGTCTAGATAAGACTAACGTTTTTAAAACCACGAAGGCAT-GAAAGTCAGTGATCCACAGATTAGAACGACATTCCATTGTAAAGCATCTCTAAGGGAAAGCATCCAAGATAAAAAGATAACGGCCCGAGAAAATGTTTGTAATAATGATGTTTATCAGTTTTACAT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8442785 476 + 10161646 tcatctgagtatgtctttatttggagttgaaagttcttttcattcagcggttaaatggtgtgggg-aaaacaagaaaaaagctattgggctgcttctttctggctttcatcatttcagatgataaatccttcacattttaactgctgttcacctataggtaatgggtttctttctggtcaatttcaagatgctttttctttgtgttcaTTACCTACAGGTGTGTGTTGCGCTGTGGGATTCGGCTCAAATCGTCCTTCCCCCGTTAGTTGTGCACACATTAACTCTGTTAATCTGTGCAATGAGGAAAGCACGTCTAGATAAGACTAACGTTTTTAAAACCACGAAGGCAT-GAAAGTCAGTGATCCACAGATTAGAACGACATTCCATTGTAAACCATCTCTAAGGGAAAGCATCCAAGATAAAAAGATAACAGCCCGAGAAAATGTTTGTAATAATGATGTTTATCAGTTTTACAT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1473970 477 + 3144229 tcatctgagtatgtctttatttggagttgaaagttcttttcattcagcagttaaatggtgtgggg-aaaacaagaaaaaagccattgggctgcttctttctggctttcatcatttcagatgataaatccttcacattttaactgctgttcacctataggtaatgggtttctttctggtcaatttcaagatgctttttctttgCGTTCATTACCTACAGGTGTGCGTTGCGCTCTGGGATTCAGCTCAAATCATCCTTCCCCCATTAGTTGTGCACACATTAACTCAGTTAATCTGTGCAATGAGGAAAGCACGTCTAGATAAGACTAACGTTTTTAAAACCACGAAGGCATGGAAAGTCAGTGATCCACAGATTAGAACGACATTCCATTGTAAAGCATCTCTAAGGGAAAGCATCCAAGATAAAAAGATAACGGCCCGAGAAAATGTTTGTAATAATGATGTTTATCAGTTGTACAT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96758317 477 + 98384682 tcatctgagtatgtctttatttggagttgaaagttcttttcattcagcggttaaatggtgtgggg-aaaacaagcaaaaagctattgggctgcttctttctggctttcatcatttcagatgataaatccttcacattttaactgctgttcacctataggtaatgggtttctttctggtcaatttcaagatgctttttctttgtgttcaTTACCTACAGGTGTGTGTTGTGCTGTGGGATTCGGCTCAAATCATCCTTCCCCCATTAGTTGTGCACACATTAACTCAGTTAATCTGTGCAATGAGGAAAGCACGTCTAGATAAGACTAACGTTTTTAAAACCACGAAGGCATGGAAAGTCAGGGATCCACAGATTAGAACAACATTCCATTGTAAAGCATCTCTAAGGGAAAGCATCCAAGATAAAAAGACAACGGCCCGAGAAAATGTTTGTAATAATGATGTTTATCAGTTGTACAT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8325842 474 - 10857215 TCATCTGAGTATGTCTTTatttggagttgaaagttcttttcattcagcagttaaatggtgtggggaaaaacaagaaaaaagctattgggctgcttctttctggctttcatcatttcacatgataaatcctttacattttaactgctgttcacctataggtaatgggtttctttctggtcaatttcaagatgctttttctttgtgttCATTACCTACAGGTGTGTGTTGCACTGTGGGATTCGGCTCAAATCGTCCTT----TGTTAGTTGTGCTCACATTAACTCAGTTAATCTGTGCAATGAGGAAAGCACGTCTAGATAAGACTAAAGTTTTTAAAACCACGAAGGCATGGAAAGTCAGTGATCCACAGATCAGAACAACATTCCATTGTAAAGCATCTCTAAGGGAAAGCATCCAAGATAAAAAGATAACGGCCCGAGAAAATGTTTGTAATAATGATGTTTATCAGTTGTACAT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15680557 476 - 23502949 TCATCTGAGTATGTCTTTatttggagttgaaagttcttttcattcagcggttaaatggtatggga-aaaacga-aaaaaaactattgggctgcttctttctggctttcatcatttcagatgataaatcctttacattttaactgctgttcacctatacataatgggtttctttctggtcaatttcaagatgctttttctttgtgttCATTACCTACAGGTGTGTGTTGCGCTGTGGGATTTGGCTCAAATCGTCCTCCCCCCGTTAGTTGTGCACACATTAACTCAGTTAATCTGTGCAATGAGGAAAGCACGTCTAGGTAAGACTAAAGTTTTTAAAACCACGAAGGCATGGAAAGTCAGTGATCCACAGATTATAACAACATTCCATTGTAAAGCATCTCTAAGGGAAAGCATCCAAGACAAAAAGATAACGGCCGGAGAAAATGTTTGTAATAATGATGTTTATCGCTTGTACAT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169970365 475 + 171630274 tcatctgAGTATGTCTTTATTTACAGTTTAAAGTTCTTCTCATTTGACAGTTAAGAGGTATAAAA-AAAACAAGAAAaaaaatattgggctagttctttctggctttcattatttcagatggtaaatccactatattctaattgctgttcaaccacagataatgtgtttttttctggcca-tttcaagatg-tttttctttgttttcaTTACCTATAGGTGTGTGCTGTGCTGTGGGATTTGGCTCAAACCATCCTTCCCCTGTTAGTAGTGCACACATTAACTCAGTTACTCTGTGCATTGAGAAAAGTGCCTCTAAATATGAGTAAAGTTTTAAAAACCACTAAGGCATGGAAAGTCAGTGATCCACAGATTAGAGCATCATTCCATTGTGAAGCCTCTCTAAGGAAAAGCATCAAAGAGAAAAAGATAATGGACCGAGAAAATGGTTGTAGTAGTGATGTTTATCACCTGCACAT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1365888 471 - 2905041 tcatctgAGTGTGTCTTCATTTGCAGTTGAAAGTTCTTCTCAGTCGACAGTTAAGAGGTATGGGA-AAAACAAGAAAaaaaatattgcactacttctttctggctttcattatttcacatgggaaatccactatattttaattgctcttcgcctacagataatgggtttttttctgcccattttcaggatg-tttttctttgttttcaTTACCTATAGGTGTGTGCTGTGCTGTGGGGTTTGGCTCAAACCGTCCTTCCCCTCTTAGCAGTGCACACATTAACTCAGTTACTCTGTGCATTGAGAAAAGTGCCTCTAAATAAGACTGAAGTTTTAAAAACCACTAAGGCGTGGAAAGTCAGTGATCCACATATTAGAGCATCGTTCCACTGTGAAG-----CTAAGGAAAAGCATCAAAGAGAAAAAGATAACGGACTGAGAAAACATTTGTAGCAGTGATGTTTACCACTTGCACAT i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1336265 476 - 2164891 TCATCTGAGTATGTCATTATTTACAGTTGAAAGTTCTTCTCATTCAACGGTTAACAGGTATGGGA-AAAACAAGAAAaaaaatattgggctacttctttctggctttctttatttcagatggtaaatccactatattttaattgctgttcatctacagataatggttttttttctggtcattttcaagatg-tttttctttgttttcgttatctataggtgtgtgctgtgctgtggggtttGGCTCAAACCGTCGTTCCCCTGTTAGTAGTGCACACATTAACTCAGTTATTCTGTGCATTGAGAAAAGTACCTCTAAATAAGAATAAAGTTTTAAAAACCACTAAGGCATGGAAAGTCAGTGATCCACAGATTAGAGCATCATTCCATTGTGGAGCCTCTCTAAGGAAAAGCATCAAAGAGAAAAAGATAACGGACTGAGAAACCATTTGTAGTAGTGATGTTTATCACTTGCACAT i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1579991 462 - 1813869 tcatctgagtatgtctttatttacagttggaag---ttctcattcgacatttaagaggtatggga-aaaacaag-aaaaaaatattgggctacttctttctggctttcattatttcagatagtaaatccactatattttaattgctgttaatctacagataatggtttcttttctggccattttcaagatg-tttttctttgttttcaTTACCTATAGGTGTGTGCTGTGCTGTGGGATTTGGCTCAAACCGTCCTTCCCCTGT----------AACATTAACTCAGTTACTCTGTGCATTGAGAAAAGTGCCTCTAAATAAGACTCAAGTTTTAAAAACCACTAAGGCATGGAAAGCCAGTGATCCACAGATTAGAGCATCATTCCGTCGTGAAGCCTCTCTAAGGAAAAGCATCGAAGAGAAAATGACGACAGGCTGAGAAAACGTTTGCAGTAGTGATGTGTATCACTTGCACAT i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 10997265 5995 - 12073884 I e dasNov3.JH569188 664695 9804 + 760995 I e canFam3.chr1 56234268 6455 + 122678785 I a score=3448617.000000 s hg38.chr6_KB021644v2_alt 181547 376 + 185823 ctacctgggcttggttctgccatt-ggttgagggtctggaaatgacgcctctgggtctccttcttgtatgggtaggggtatatcagatgccctgccac-----tgtgctca-tgttttc-ctcttttttagtccttaggtaccaaaccattttcacctttatccagccaccattcagagttctcctttggttgtttcttgcagtattttcagagtttctagtcatagttattggtgtgagcaggaagaaacaggtctatatcagcttgaacaggtcagaaattctgctaaAGCTATAGTCTCACAGAATGTCAGGGTTTATTTTAGCAAAACAAAAAA-----TAGTGTATAAATCCTAATTGAGTGTACTGAAGGGAAAGA-AGAA---GAA s panTro5.chr6 173644515 372 + 175400573 ctacctgggcttggttctgccatt-ggctgagggtctggaaatgatgcctctgggtctccttcttgtatgggtaggggtatatcagatgccctgccac-----tgtgctca-tgttttc-ctcttttttagtccttaggtaccaaaccattt-cacctttatccagccaccattcagagttctcctttggttgtttcttgcagtattttcagagtttctagtcatagttattggtgtgagcaggaagaaacaggtctatatcagcttgaacaggtcagaaattctgctaaAGCTATAGTCTCACAGAGTGTCAAGGTTTATTTTAGCAAAACAAAAAA-----TAGTGTATAAATCCTAATTGAGTATACTGAAGGGAAAGA-AGAA------ i panTro5.chr6 C 0 C 0 s panPan2.chr6 171869964 372 + 173848474 ctacctgggcttggttctgccatt-ggctgagggtctggaaatgatgcctctgggtctccttcctgtatgggtaggggtatatcagatgccctgccac-----tgtgctca-tgttttc-ctcttttttagtccttaggtaccaaaccattt-cacctttatccagccaccattcagagttctcctttggttgtttcttgcagtattttcagagtttctagtcatagttattggtgtgagcaggaagaaacaggtctatatcagcttgaacaggtcagaaattctgctaaAGCTATAGTCTCACAGAGTGTCAAGGTTTATTTTAGCAAAACAAAAAA-----TAGTGTATAAATCCTAATTGAGTATACTGAAGGGAAAGA-AGAA------ i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11556278 375 - 12463322 ctacctgggcttggttctgccatt-ggttgagggtctggaaatgatgcctctgggtctccttcttgtatgggtaggggtatatcagatgccctgccac-----tgtgctca-tgttttc-ctcttttttagtccttaggtaccaaaccattt-cacctttatccagccaccattcagagttctcatttggttgtttcttgcagtattttcagagtttctagtcatagttattggtgtgagccggaagaaacaggtctatatcagcttgaacaggtcagaaattctgctaaAGCTATAGTCTCACAGAATGTCAGGGTTTATTTTAGCAAAACAAAAAA-----TAGTGTATAAATCCTAATTGAGTATACTGAAGGGAAAGA-AGAA---GAA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156387453 375 + 157873769 ctacctggacttggttctgccatt-ggttgggggtctggaaatgatgcctctgggtctccttctcatatgggtaggggtacatcagatgccctgccac-----ttggctca-tgttttc-ttcttttttagtccttaggtaccaaaccattt-catctttatccagccaccattcagagttcccctttggttgtttcttgcattattttcagggtttctagttgtagttattggtatgagcaggaagaaacaggtctatatcagcttgaacaggtcagaaattctgctaaCGCTACAGTCTCACAGAATGTCAAGGTTTATTTTAGCAAAACAAAAAA-----TAGTGTATAAATCCTAATCGAGTATACTGAAGGGAAAGA-AGAA---GAA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170414088 375 + 172585720 ctacctgggtttggttctgccatt-ggttggggctctggaaatggtgcctctgggtctctgtcttgtatgggtaagggtatatcagatgccctgctgc-----tgtgctca-tgttttc-ctcttttttagtccctagctaccaaaccattc-cacctttatccagccaccattcagagttctcctttggttgtttcttgcattattttcagagtttctagttgtagttattggtataagcaggaagaaacacgtctatataagcttgAACCGGTCAGAAATTCTGCTAAAGCTACAGTCTCACAGAATGTCAAGGTTTATTTTAGCAAAACAAAAAA-----TAGTGTATAAATCCTAATCAAGTATACTGAAGGGAaaga-agaa---gaa i rheMac8.chr4 C 0 I 3 s macFas5.chr4 169157371 375 - 170955103 ctacctgggtttggttctgccatt-ggttggggctctggaaatggtgcctctgggtctccgtcttgtatgggtaagggtatatcagatgccctgctgc-----tgtgctca-tgttttc-ctcttttttagttcttaggtaccaaaccattc-cacctttatccagccaccattcagagtcctcctttggttgtttcttgcgttattttcagagtttctagttgtagttattggtataagcaggaagaaacaggtctatataagcttgAACCGGTCAGAAATTCTGCTAAAGCTACAGTCTCACAGAATGTCAAGGTTTATTTTAGCAAAACAAAAAA-----TAGTGTATAAATCCTAATCAAGTATACTGAAGGCAaaga-agaa---gaa i macFas5.chr4 C 0 I 3 s macNem1.NW_012011000v1 8443261 375 + 10161646 ctacctgggtttggttctgccatt-ggttggggctctggaaatggtgcctctgggtctccgtcttgtatgggtaagggtatatcagatgccctgctgc-----tgtgctca-tgttttc-ctcttttttagttcttaggtaccaaaccattc-cacctttatccagccaccattcagagtcctcctttggttgtttcttgcgttattttcagagtttctagttgtagttattggtataagcaggaagaaacaggtctatataagcttgAACCGGTCAGAAATTCTGCTAAAGCTACAGTCTCACAGAATGTCAAGGTTTATTTTAGCAAAACAAAAAA-----TAGTGTATAAATCCTAATCAAGTATACTGAAGGCAaaga-agaa---gaa i macNem1.NW_012011000v1 C 0 I 3 s cerAty1.NW_012002071v1 1474447 374 + 3144229 ctacctgggtttggttctgccact-ggttgggggtctgg-aatggtgcctctgggtctccttcttgtatgggtaggggtatatcggatgccctgctgc-----tgtgctca-tgttttc-ttcttttttagtccttaggtaccaaaccattc-cacctttatccagccaccattcagagttctcctttggttgtttcttgcattattttcagagtttctagttgtagttattggtataagcaggaagaaacaggtctatataaacttgAACCGGTCAGAAATTCTGCTAAAGCTACAGTCTCACAGAATGTCAAGGTTTATTTTAGCAAAACAAAAAA-----TAGTGTATAAATCCTAATCAAGTATACTGAAGGGAaaga-agaa---gaa i cerAty1.NW_012002071v1 C 0 I 3 s chlSab2.chr13 96758794 365 + 98384682 ctacctgggtttggttctgccatt-ggttgggggtctggaaatggtgcctctgggtctccttcttgtatgggtaggggtatattggatgccctgctgc-----tgtgctca-tgttttc-ctcttttttactccttaggtaccaaaccattc-cacctttatccagccaccattcagagttctcctttggttgtttcttgcgttattttcagagtttctagttgtagttattggtataag----------cagatctatataagcttGAACCGGTCAGAAATTCTGCTAAAGCTACAGTCTCACAGAATGTCAAGGTTTATTTTAATAAAACAAAAAA-----TAGTGTATAAATCCTAATCAAGTATACTAAAGGGAAAGA-AGAA---GAA i chlSab2.chr13 C 0 I 3 s manLeu1.NW_012106474v1 8326316 374 - 10857215 ctacctgggtttcgttctgccatt-ggttgggggtctgg-aatggtgcctctgggtctccttcttgtatgggtaggggtatatcagatgccctgctgc-----tgtgctcg-tgttttc-ttcttttttagtccttaggtaccaaaccattc-cacctttatccagccaccattcagagttctcctttggttgtttcttgtgttattttcagagtttctagttgtagttattggtataagcaggaagaaacaggtctatataaacttgAACCGGTCAGAAATTCTGCTAAAGCTACAGTCTCACAGAATGTCAAGGTTTATTTTAGCAAAACAAAAAA-----TAGTGTATAAATGCTAATCAAGTATACTGAAGGGAAAGA-AGAA---GAA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15681033 371 - 23502949 ctacctgggtttggttctgccatt-ggttgggggtctggaaatggtgcctctgggtctc---cttgtatgggtaggggtatatcggatgccctgctgc-----tgtgctca-tgttttc-ctc-tttttagtccttaggtaccaaaccattc-cacctttatccagccaccattcagagttctcctttggttgtttcttgcgttattttcagagtttctagttgtagttattggtataagcaggaagacacaggtctatacaagcttgAACCGGTCAGAAATTCTGCTGAAGCTACAGTCTCACAGAATGTCAAGGTTTATTTTAGCAAAACAAAAAA-----TAGTGTATAAATCCTTATCAAGTATACTGAAGGGAAGGA-AGAA---GAA i colAng1.NW_012114488v1 C 0 I 3 s calJac3.chr4 169970840 366 + 171630274 ctacctgggctttgttctggcatt-gcctgggggcctggatatgactcctct-ggtctcctccctgtatgggtgggggtatatcagatgcccggatactgctatgtactcatttttttt-ctcttttttagtccttaggtaccaaaccattt-cacc----tctagccaccattcagagttctccttcaattgtttctcacactattttccgagtttctagttgtacttattggtatgaacaggaagaaacaggtctataacatcttgaatggatcagaaatTCT------GCTATAGTCTCACAGAATGCCAAGGTTTATTTTAGTAAAAAAAAATAAC------TGTATAAATCCTAATCCAGTGTACCAAAGGAAAAGA-AGAA------ i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1366359 376 - 2905041 ctacctgggcttcgttctggcatt-ggct-ggggcctggatatgccgcttcg-ggtctccttcctgtatgggtgggggtatatcagatgccctgatgctgctctgtactcattttttttcctcttttttagtccttaggtaccaaaccattt-cacctttatctagccaccattcagagttctcctttggttgtttcttgcactactttcagagtttctagttgtacttattggtataagcaggaagaagcaggtctatatcatcttgaatggatcagaaatTCT------GCTATAGTCTCACAGAATGTCAAGGTTCATTTCAGTAAAAAAAAAAAAAAAATAGTGTATAAATCCTAATCCAGAGTACTGAAGGGAAAGA-AGAA------ i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1336741 367 - 2164891 ctacctgggcttcgttctggcatt-ggctaggcgcctggatatgatgcctct-ggtctccttcctgtatgggtgggggtatatcagatgccctgatgctgctatgtactcatttttttt-ctcttttttagtccttaggcaccaaaccattt-cacctttatctagccaccattcatagttctcatttggttgttttttgcactattttcagagtttctagttg-gcttattggtatgagcaggaagaaacaggtctgtatcattttgaatggatcagaaatTCT------GCTATAGTCTCACAGAATGTCAAGGTTTATTTTAGGGGGAAAAA--------TAGGGTATAAATCCTAATCCAGTGTACTGAAGGGAAAGA-AGAA------ i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1580453 369 - 1813869 ctgcctgggcttcgttctggcatt-ggcc-ggggcctggatatgctgcctct-ggtctccttcctgtacgg--tggggtatatcagatgccctgatgctgctgtgtactcagtgttttt-ctcgtttttagtccttacgtaccaaagcattt-cagcgttatccagccaccattcagagttctcctttggttgtttctcgcactgtttccagcgtctctagttgtacttattggtatgagcaggaagaaacaggtctacgtcatcttgagtggatcagaaatTCT------GCTCTAGTCTCACAGAATGTCAAGGTTTACTTTAGTAAAAAACAA-------CAGTGTATAAATCCTAATCCAGTGTACCGAAGGGAAAGA-AGAGCGA--- i aotNan1.NW_018494782v1 C 0 I 81 s canFam3.chr1 56240723 315 + 122678785 ctactttgtttt--ttctggtgttgggcttggagtctggaaat-----------------tcttcagattagtgggggtaaataagatgccc-----------tctgctca-gctgttc-ctc-----cagtgctagggtaacaaatcaccc--------------------------atcttgctctggtcccttgctgca-taacttcagagtttcccattgtacttcatggtgacagcaggaagaagcaagtctatgccatcttgtccagatcagaagttctgtttaaGTTATGGTCTTACATAAATTCAAGGTAAAAGTCAGCAAAAGAATAGA--------GGGACAAATCCTAAATCAGAAGAATGAAGGAAAAGAGAGAA------ i canFam3.chr1 I 6455 C 0 e otoGar3.GL873575 10997265 5995 - 12073884 I e dasNov3.JH569188 664695 9804 + 760995 I a score=653372.000000 s hg38.chr6_KB021644v2_alt 181923 86 + 185823 TTAAGAATAAAAATAATATCAAAGATTTATGTAGAGCTGACGTTGTGCTGGGCATACACACTTACACAT--ATGCATATGTGCTCTGT s panTro5.chr6 173644887 85 + 175400573 -TAAGAATAAAAATAATATCAAAGATTTATGTAGAGCTGACGTTGTGCTGGGCATACACACTTACACAT--ATGCATATGTGCTCCGT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171870336 85 + 173848474 -TAAGAATAAAAATAATATCAAAGATTTATGTAGAGCTGACGTTGTGCTGGGCATACACACTTACACAT--ATGCATATGTGCTCCAT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11556653 86 - 12463322 TTAAGAATAAAAATAATATCAAAGATTTATGTAGACCTGACGTTGTGCTGGGCATACACACTTACACAT--CTGCATATGTGCTCCGT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156387828 85 + 157873769 TTAAAAATAAGAATAATACCAAAGATTTATGTAGAGCTGACGTTGTCCTGGGTGTACACACTTACGGAC--ATGCATATGTGCTCC-T i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170414466 86 + 172585720 ttaagaataagaataaTATCAAAAGTTTATGTAGAGCTGATGTTGTGCTGGGCATACACACTTACGCAC--ATGCATATGTGCTCCCT i rheMac8.chr4 I 3 C 0 s macFas5.chr4 169157749 86 - 170955103 ttaagaataagaataaTATCAAAAGTTTATGTAGAGCTGATGTTGTGCTGGGCATACACACTTACGCAC--ATGCATATGTGCTCCCT i macFas5.chr4 I 3 C 0 s macNem1.NW_012011000v1 8443639 86 + 10161646 ttaagaataagaataaTATCAAAAGTTTATGTAGAGCTGATGTTGTGCTGGGCATACACACTTACGCAC--ATGCATATGTGCTCCCT i macNem1.NW_012011000v1 I 3 C 0 s cerAty1.NW_012002071v1 1474824 86 + 3144229 ttaagaataagaataaTATCAAAGGCTTATGTAGAGCTGATTTTGTGCTGGGCATACACACTTACGCAC--ATGCATATGTGCTCCCT i cerAty1.NW_012002071v1 I 3 C 0 s chlSab2.chr13 96759162 86 + 98384682 TTAAGACTAAGAATAATATCAAAGGTTTATGTAGAGCTGATGTTGTGCTGGGCATACACACTTACGCAC--ATGCATATGTCCTCCCT i chlSab2.chr13 I 3 C 0 s manLeu1.NW_012106474v1 8326690 86 - 10857215 TTAAGAATAAGAATAATATCAAAGGTTTATGTAGAGCTGATTTTGTGCTGGGCATACACACTTACGCAC--ATGCATATGTGCTCCCT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15681407 86 - 23502949 TCAAGAATAATAATAATATCGAAGGTTTATGTAGAGCTGATGTTGTGCTGGGCATACACACTTATGTGC--ATGCATATGTGCTCCCT i colAng1.NW_012114488v1 I 3 C 0 s calJac3.chr4 169971206 85 + 171630274 CTAAAAATAAGAATACCGTCGAAGGTTTGTACAGAGCGGACGTCACGCGGGGCCTACACACTTACGCAC--GTGCATGTGTG-CCCTG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1366735 85 - 2905041 CTAAAAATAAGAACACTGTCAAAGGTTTGTGTCGCATGGACGTCACGCGGGG-CTACACACTTATGCAC--GTGCATGTGTGCCCCTG i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1337108 86 - 2164891 CTAAAAATAAGAACACTGTCAAAGGTTTGTGTAGAGCGGACGTCACGCGGGGCCTACACACTTATGCGT--GTGCATGTGTGCCCCTG i cebCap1.NW_016107695v1 C 0 C 0 s canFam3.chr1 56241038 80 + 122678785 ------TTAAGGACAATATCAACCACTTATAGGGTGCCGAC--TACACTAGGCATACACTGTTACATACAAATCCACCTGCACTCCCA i canFam3.chr1 C 0 C 0 e otoGar3.GL873575 10997265 5995 - 12073884 I e aotNan1.NW_018494782v1 1580822 81 - 1813869 I e dasNov3.JH569188 664695 9804 + 760995 I a score=8872860.000000 s hg38.chr6_KB021644v2_alt 182009 966 + 185823 GACTGTAGGAATCTAGGTTCTGTCTtgctgagtattcctaaattaatatattgagacttaa----cctctttcttgaacttcaggcttgtatcagc--ttgcttcattaaagtctctattttgctacgtgaacacctcaaactcaacatgtccaaacc--actttccatcttccctgc-----acgctagttcctcctgcagatccctcacatttgttagtgatgacttctcccttccagccactccagtcagagatcctggagtcgccttttgatgcctctccttatctcattactcagatccaat-cattggcaagtccagttggtgctaccgtcagagcatatcaagaatctaacctctcctttgcattatt-----------ccagct---agccatctt------cttaggctgttg--------------------------tccctctcatttgatgatggtagcagcctcctaatatgatcctgcttcaccggtttctctcttctgcccttttcaacacatcagccagaaggaccttgtt-aagtctgagtcggatgcagtccctctcctgac-tgtgtctcctacggcttcccactccatcagggtgaaatctcttgcagggttttcaagatctcgtgtaat---acatcc------cacaacctctccttctctatctAAtgctggccgtgtcctgtccgccagtctcagagagctctccgttcttc-cccac-tgctacgtg-ccaggaggctgaacctcatgacctttaggtgcaggctccttgctttccgttttcagctggctttagaactggaaacaccaggaggaagtcaggatgtgggagaagggtgaagctggggaagtctctctttctcccttctcctcggccaggtgttggcaagggttgctcttctttgtgtccacagatcctgtccagtgggctccctacagcccaggcaggctcttgcggggctccatggttatacctcgccttgcttcaggccaagggtttggaatgg-ttTGCTTAA--- s panTro5.chr6 173644972 965 + 175400573 GACTGTAGGAATCTAGGTTCCGTCTtgctgactattcctaaattaatatattgagacttaa----cctctttcttgaacttcaggcttgtatcagc--ttgcttcattgaaatctctattttgctaagtaaacacctcaaactcaacatgtccaaacc--actttccatcttccctgc-----acactagttcctcctgcagatccctcacatttgttagtgatgacttctcccttccagccactccagtcagagatcctgaagtcaccttttgatgcctctccttatctcattactcagatccaat-cattggcaagtccagttggtgctaccgtcagagcatatcaagaatctaacctctcctttgcattatt-----------ccagct---agccatctt------cttaggctgttg--------------------------tccctctcatttgatgatggtagcagcctcctaatatgatcctgcttcaccggtttctctcttctgcccttttcaacacatcagccagaaggaccttgtt-aagtctgagtcggatgcagtccctctcctgac-tgtgtctcctacggcttcccactccatcagggtgaaatctcttgcagggttttcaagatcTCGTGTAAC---ACATCC-------ACAACCTCTACTTCTCTATCTAAtgctggccgtgtcctgtccgccagtctcagagagctctccgttcttc-cccac-tgctacgtg-ccaggaggctgaacctcatgacctttaggtgcaggctccttgctttctgttttcagctgggtttagaactggaaacaccaggaggaagtcaggatgtgggagaagggtgaagctggggaagtctctccttctcccttctcctcggccaggtgttggcaagggttgctcttctgtgtgtccacagttcctgtccagtgggctccctacagcccaggcaggctcttgcggggctccatggttatacctcgccttgcttcaggccaagggtttggaatgg-ttTGCTTAA--- i panTro5.chr6 C 0 C 0 s panPan2.chr6 171870421 965 + 173848474 GACTGTAGGAATCTAGGTTCCGTCTtgctgactattcctaaattaatatattgagacttaa----cctctttcttgaacttcaggcttgtatcagc--ttgcttcattgaagtctctattttgctaagtaaacacctcaaactcaacatgtccaaacc--actttccatcttccctgc-----acactggttcctcctgcagatccctcacatttgttagtgatgacttctcccttccagccactccagtcagagatcctgaagtcaccttttgatgcctctccttatctcattactcagatccaat-cattggcaagtccagttggtgctaccgtcagagcatatcaagaatctaacctctcctttgcattatt-----------ccagct---agccatctt------cttaggctgttg--------------------------tccctctcatttgatgatggtagcagcctcctaatatgatcctgcttcaccggtttctctcttctgcccttttcaacacatcagccagaaggaccttgtt-aagtctgagtcggatgcagtccctctcctgac-tgtgtctcctacggcttcccactccatcagggtgaaatctcttgcagggttttcaagatcTCGTGTAAT---ACATCC-------ACAACCTCTACTTCTCTATCTAAtgctggccgtgtcctgtccgccagtctcagagagctctccgttcttc-cccac-tgctacgtg-ccaggaggctgaacctcatgacctttaggtgcaggctccttgctttctgttttcagctgggtttagaactggaaacaccaggaggaagtcaggatgtgggaggagggtgaagctggggaagtctctctttctcccttctcctcggccaggtgttggcaagggttgctcttctgtgtgtccacagttcctgtccagtgggctccctacagcccaggcaggctcttgcggggctccatggttatacctcgccttgcttcaggccaagggtttggaatgg-ttTGCTTAA--- i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11556739 962 - 12463322 GACTGTAGGAATCTAGGTTCTGTCTtgctgagtattcctaaattaatatattgagacttaa----cctctttcttgaacttcaggcttgtatcagc--ttgcttcattaaagtctctattttgctacataaacacctcaaactcaacatgtccaaacc--actttccatcttccctgc-----acactagttcctcctgcagatccctcacatttgttagtgatgacttctcccttccagccactccagtcagagatcctggagtcgccttttgatgcctctccttatctcattactcagatccaat-cactggcaagcccagttggtgctaccgtcagagcatatcaagaatctaacctctcctttgcattatt-----------ccagct---agccatctt------ctcaggctgttg--------------------------tccctctcatttgatgatggtagcagcctcctaatatgatcctgcttcaccggtttctctcttctgcccttttcaacacatcagccagaaggaccttgtt-aagtctgagtcggatgcagtccctctcctgac-tgtgtctcctacagcttcccactccatcagagtgaaatctcttgcagggttttcaagatctcgtgtaat---acatcc------cacaacctctcCTTCTCTATCTAATGCTGGCCATGTCCTGTCCACCAGTCTCAGAGAGctctgcgttcttc-cccac-tgctacgtg-ccaggaggctgaacctcatgacctttaggtgcaggctccttgctttctgttttcagctgggtttagaactggaaacaccaggaggaagtcaggatgtgggagaagggtgaagctggggaagtctctctttctccctt---ctcggccaggtgttggcaagggttgctcttctttgtgtccacagatcctgtccagtgggctccctacagcccaggcaggctcttgcagggctccatggttatacctcaccttgcttc-ggccaagagtttggaatgg-ttTGCTTAA--- i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156387913 954 + 157873769 GATTGTAGgactctaggttccgtcttgctgattattcctaaattaatatattgacacttaa----cctctttcttgaacttcaggcttgcatcagc--ttgcctcattgaagtctctattttgctacgtaagcagctcaaactcaacatatccgaacc--actttccatcttccctgc-----acaccagttcctcctgtagatccctcacatttgttagtgatgacttctcccttccagctactccgatcagagatcctggagtcgtcttctgatgcctctct--------ttactcagatccaat-catcagcaagtccagttggtgctaccgtcagaacatatcaagaatctaacctctcctttgcattatt-----------ccagct---agccatctt------cttaggccgttg--------------------------tccctctcatttgatgaaggtagcagcctcctaatgtgatcctgcttcacccgtttctctcttctgcccttttcaacacatcagccagaaggcccttgtt-aagtctgagtcagatgcagtccctctcctgac-tgtgtctcctatggcttcccactccatcagggtgaaatctcttgcagggttttcaagatctcgtgtaat---acaccc------cacaacctctccttctctatctAATGCTGGGCGTGTCCTGCCTGCCAGTCTCAGAGAGctctccatttttc-cccac-tgctacata-ccaggaggctgaacctcatgacctttaggtgcaggttccttgctttctgttttcggctgagtttagaactggaaataccaggaggaagtggggatgtgggagaagggtgaagctggggaagtctctctttctcccttctcctcggccaggtgttggcaagggctgctcttctgtgtgtccacagatcctgtccagtgggctccctacagcc----caggctcttgtggggctccatggttatacctcgccttgcttcaggccaagggtttggaatgg-ttTGCTTAA--- i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170414552 960 + 172585720 GATTGTAGGAATCTAGGTTccatcttgctga-tattcttaaattaatacattgagacctaa----cctctttcttcaacttcaggcttgtatcagcttttgcctcattaaagtctctattttgctacgtaaacagttcagactcaacatgtccaaacc--actttccatcttccctgc-----acaccagttcctcctgcagatccctcacatttgttagtgatgacttctcccttccagctactccggtcagagatcctggagtcgtctcctgatgcttctccttatctcatcactcagatccaat-catcaccaagccctgttggtgctaccgtcagaacatatcaagcatctaacctctcctttgcattttt-----------ccaact---agccgtctt------cttaggccattg--------------------------accctcttattggatgatggtagcagcctcctaatgttatcttgcttcacccatttctctcttctgcccttttcaacacatcagccagaaggaccttttt-aagtctgagtcagacgcagtccctctcctgacttgtgtctcctaagacttcccgctccagcagggtgaaatctgttgctgggttttcaagacctcatgtaat---acaccc------cacgaactctc---ctccatctAATGCTGTGCATGTCCTCTCTGCCCGTCTCAGAGAGctctccattcttc-cccac-tgctacgtg-ccagaaggctgaacctcatgatcttcaggtgcaggctccttgctttctgttttctgctgggtttagaactggaaacaccaggaggacttcaggatgtgggagaagggtgaagct-gggaagtctctctttctcccttctcctcggccaggtattggcaagggctgctcttctgtgtgttcacagatcctgtccagtgggcaccctacagcc----caggttcttgtggggctccatggttataccttgccttgcttcaggccaagggtttggaatgg-ttTGCTTAA--- i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169157835 960 - 170955103 GATTGTAGGAATCTAGGTTccatcttgctga-tattcttaaattaatacattgagacctaa----cctctttcttcaacttcaggcttgtatcagcttttgcctcattaaagtctctattttgctacgtaaacagttcagactcaacatgtccaaacc--actttccatcttccctgc-----acaccagttcctcctgcagatccctcacatttgttagtgatgacttctctcttccagctactccggtcagagatcctggagtcgtctcctgatgcttctccttatctcatcactcagatccaat-catcaccaagccctgttggtgctaccgtcagaacatatcaagcatctaacctctcctttgcattttt-----------ccaact---agccatctt------cttaggccattg--------------------------accctcttattggatgatggtagcagcctcctaatgttatcttgcttcacccatttctctcttctgcccttttcaacacatcagccagaaggaccttttt-aagtctgagtcagacgcagtccctctcctgACTTGTGTCTCCTAAGACTTCCCGCTCCAGCAGGGTGAAATCTGTTGCTGGGTTTTCAAGACCTCATGTAAT---ACACCC------CACGAACTCTC---CTCCATCTAAtgctgtgcatgtcctctctgcccgtctcagagagctctccattcttc-cccac-tgctacgtg-ccagaaggctgaacctcatgatcttcaggtgcaggctccttgctttctgttttctgctgggtttagaactggaaacaccaggaggacttcaggatgtgggagaagggtgaagct-gggaagtctctctttctcccttctcctcggccaggtgttggcaagggctgctcttctgtgtgttcacagatcctgtccagtgggcaccctacagcc----caggttcttgtggggctccatggttataccttgccttgcttcaggccaagggtttggaatgg-ttTGCTTAA--- i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8443725 960 + 10161646 GATTGTAGGAATCTAGGTTccatcttgctga-tattcttaaattaatacattgagacctaa----cctctttcttcaacttcaggcttgtatcagcttttgcctcattaaagtctctattttgctacgtaaacagttcagactcaacatgtccaaacc--actttccatcttccctgc-----acaccagttcctcctgcagatccctcacatttgttagtgatgacttctctcttccagctactccggtcagagattctggagtcatcttctgatgcttctccttatctcatcactcagatccaat-catcaccaagccctgttggtgctaccgtcagaacatatcaagcatctaacctctcctttgcattttt-----------ccaact---agccatctt------cttaggccattg--------------------------accctcttattggatgatggtagcagcctcctaatgttatcctgcttcacccatttctctcttctgcccttttcaacacatcagccagaaggaccttttt-aagtctgagtcagacgcagtccctctcctgac-tgtgtctcctacaacttcccactccagcagggtgaaatcccttgcagggttttcaagacctcatgtaat---ataccc------cacaacctctc---CTCTATCTAAtgctgtgcatgtcctctctgcccgtctcagagagctctccattcttc-cccac-tgctacgtg-ccaggaggctgaacctcatgacctttaggtgcaggctccttgctttctgttttctgctgggtttagaactggaaacaccaggaggacctggggatgtgggagaagggtgaagctggggaagtctctctttctcccttctcctcggccaggtattggcaagggctgctcttctgtgtgttcacagatcttgtccagtaggcaccctacagca----caggctcttgtggggctccatggttatacctcgccttgcttcaggccaagggtttggaatgg-ttTGCTTAA--- i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1474910 960 + 3144229 GATTGTAGGAATCTAGGTTccatcttgctga-tattcttaaattaatacatcaagacctaa----cttctttcttgaacttcaggcttgtatcagcttttgcctcatgaaagtctctattttgctacgtaaactgttcagactcaacatgtccaaacc--actttccatcttccctgc-----acaccagttcctcctgcagatccctcacatttgttagtgatgacttctctcttccagctactccggtcagagatcctggagtcgtcttctgatgcttctccttatctcatcactcagatccaat-catcaccaagccccgttggtgctaccgtcagaacatatcaagcatctaacctctcctttgcattttt-----------ccaact---agccatctt------cttaggccattg--------------------------tccctctcattgaatgatggtagcagcctcctaatgttattctgcttcacccatttctctcttctgcccttttcaacacatcagccagaaggaccttttt-aagtctgagtgagacgcagtccctctcctgac-tgtgtctcctacgacttcccactccagcagggtgaaatctcttgcagggttttcaagacctcatgtaat---acaccc------cacagcctctc---CTCTATCTAAGGCTGTTCATGTCCTCTCTGCCCGTTTCAGAGAGctctccattcttc-cccac-tgctaggtg-ccaggaggctgaacctcatgacctttaggtgcaggctcctcgctttctgttttctgctgtgtttagaactgggaacaccaggaggacctcgggatgtgggagaagggtgaagctggggaagtctctctttctcccttctcctcggccaggtattggcaaaggctgctcttctgtgtgttcacagatcctgtccagtgggcaccctacagcc----caggttcttgtgggactccatggttatacctccccttgcttcaggccaagggtttggaatgg-ttTGCTTAA--- i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96759248 960 + 98384682 GATTGTAGAAATCTAGGTTccatcttgctga-tattcctaaattaatacatcgagacctaa----cctctttcttgaacttcaggcttgtatcagcttttgcctcattaaagtctctattttgctacataaacagttcagactcaacatgtccaaacc--actttccatcttccctgc-----acaccatttcctcctacagatccctcacatttgttagtgatgacttctcccttccagctactccagtcagagattctggcgtcgtcttctgatgcttctccttatctcatcactcagatccaat-catcaccaagccccgctggtgctaccgtcagaacatatcaagcatctaacatctcctttgcattttt-----------ccaacc---agccatctt------cttaggccattg--------------------------accctcttattggatgatggtagcagcctcttaatgttatcctgcttcacccatttctctcttctgcccttttcaacacatcagccagaaggaccttttt-aagtctgagtcagacgcagtcgctctcctgac-tgtgtctcctacgacttcccactccagcagggtgaaatctcttgctgggttttcaagacctcgtgtaat---acaccc------cacaacctctc---CTCTATCTAAtgctgtgcatgtcctctctgcccgtctcagagagctctccattcttc-gccac-tgctacgtg-ccaggaggctgaacctcatgagctttaggtgcaggctccttgctttctgttttctgctgggtttagaactggaaaggccaggaggacctcgggatgtgggagaagggtgaagctggggaagtctctctttctcccttctccccagccaggtattggcaaaggctgctcttctgtgtgttcacagttcctgtccagtgggcaccctacagcc----caggctcttgtggggttccatggttatacctcgcgttgcttcaggccaagggtttggaatgg-ttTGCTTAA--- i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8326776 960 - 10857215 GATTGTAGGAATCTAGGTTccatcttgctga-tattcctaaattaatacatcgagacctaa----catctttcttgaacttcaggcttgtatcagcttttgcctcatgaaagtctctattttgctacataaacagttcagactcaacatgtccaaacc--actttccatcatccctgc-----acaccagttcctcctgcagatccctcatgtttgttagtgatgacttctcccttccagctactccggtcagagatcctggagtcatcttctgatgcttctccttatctcatcactcagatccaat-catcaccaagccccattggtgctaccgtcagaacatatcaagcatctaacctctcctttgcattttt-----------ccaact---agccatctt------cttaggccattg--------------------------accctcttattggatgatggtagcagcctcctaatgttatcctgcttcacccatttctctcttctgcccttttcaacacatcagccagaaggaccttttt-aagtctgagtgagacgcagtccctctcctgac-tgtgtctcctaagacttcccgctccagcagggtgaaatctcttgcagggttttcaagacctcgtgtaat---acaccc------cacagcctctc---CTCTATCTAAGGCTGTGCATGTCCTCTCTGCCCGTTTCAGAGAGctctccattcttc-cccac-tgctaggtg-ccaggaggctgaacttcatgacctttaggtgcaggctccttgctttctgttttctgctgggtttagaactggaaacaccaggaggacctcgggatgtgggagaagggtgaagctggggaagtctctctttctcccttctcctcagccaggtattggcaagggctgctcttctgtgtgttcacagatcctgtccagtgggcaccctacagcc----caggttcttgtggggcttcatggttatacctcgccttgctacaggccaagggtttggaatgg-ttTGCTTAA--- i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15681493 958 - 23502949 GACAGTAGGAATCTAGGTTccatctcgctgactattcctaaattaatacatcgggacctaa----cctctttcttgaacttcaggcttgtatcagcttttgcctcatgaaagtctctattttgctacataaacagttcagactcaacgtgtccaaacc--actttccatcttccctgc-----acaccagttcctcctgcagatccctcacatttgttagtgatgacttctcccttccagctactccggtcagagatcctggagtcgtcttccgatgcttctccttatctcatcactcagatccaat-catcaccaagtcccgttggtgctaccatcagaacatatcaagcatctaacctctcctttgcattttt-----------ccaact---agccatctt------cttaggccattg--------------------------tccctctcatttgatgatggtagcagcctcctaatgttatcctgcttcacccatttctctcttctgcccttttcaacacatcagccagaaggacattttt-aagtctgagtcagacgcagtccctttcctg-c-tgtgtctcctacgacttcccactccagcagggtgaaatctcttgcagggttttcaagacctcatgtaat---acaccc------cacgacctctc---CTCTATCTAAtgctgcacgtgtcctctctgcccgtctcagagagctctccattcttc-cccac-tgctacgtg-ccaggaggctgaacctcatga-ctttaggtgcaggctccttgctttctgttttctgctgggtttagaactggaaacaccaggaggacctcgggatgtgggagaggggtgaagctggggaagtctctctttctcccttctcctcggccaggtattggcaaaggctgctcttctgtgtgttcatagatcctgtccagtgggcaccctacagcc----caggttcttgtggggctccatggttatacctcaccttgcttcagg-caagggtTTGGAATGG-TTTACTTAA--- i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169971291 934 + 171630274 GATTGTAGGAAtctaggttccatcttgctgattattcctcaatgaatgtattgagacccaa----cctcttcctcaaacttcaggcttatatcaga--ttgcctcattaaagcctctattttgctacctacacagctcagactcagcatg---aaacc--actctccatcctctccgc-----aaaccagctccccctgcagg-------gatttgct----atggcttctcctgtgcagacgctcagggcagagatcgtggagtcgtcttctgaagcctcccttcatctcatcactcagatccaat-cgtcagcaagcccagttggtgctaccgtcagaacctatcaagactgtcacctctcctttgcatgttt-----------ctggcc---agccgtctt------cttaggctgttg-------------tcccaggtcgtcgtccctctcacttgatcactgtagcagcatcctcatgtggtcctgcttcaccagtt--tcctttctgc--ttctcaacacatcagccggaaggaccttgtt-aaatccaagtcggatgcagtccctctcctgac-tgtgtctcctacagcttcccccttgatcagggtgaaatctcttgcagggttttcaagacctca--taat---ACACAC------CACGACCTCTC---C----TCTAACGCTGAGCGTGCtctgcctgcccctttcagagagctctccattcttc-cccac-tgctacgtg-ccaggagggtgaatctcgtgacctttaggtgcaggctccttgctttctgtttttggctgggtttagaactggaaacgccaggattaagttgggatgtgggag-agggagaagctggggaagtttcattctttcccttctcc-----------ttggcaagggctgcTTCCCAGTGTGTCCACAGATCC-ATCCAGTGGGCTCCCTAAGACC----CAGGCTCTTGCTGGGGTCCGTGGCTATACCGCCCCTTGCTTCAGGCCAACAGGCTGGGATGG--CTGCTTGG--- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1366820 967 - 2905041 GATTGCAGGCGTCTGGGCTCTGTCTtgctgattattcctcaatgaatgtattgagacccaa----cctcttccctgaattgcaggcttgtatcaga--ttgcctcactgaagtctctaccttgctacctacacagctcaaactcagcatgtccaaacc--actctccgtcctctccgc------aacccgctcctcctgcagagt-----gatttgtgagtaatggcttctcccttgcagccactcagggcagagatcctggagtcttcttctgatgcctctccttatctcatcactcagacccaat-catcagcaagcccagttggtgctgccatcagaacatatcaagaatctcacttctcccgggcattctt-----------ctggct---ggccgtcct------cttaggccgtcgtcccaggccctcatcccaggccctcgtccctctcacttgatgactgtagcaacctcctcatgtggtcctgcgtcaccagtt--tcccttctgcctttttcagcacatcagtcagaaggaccttgtt-aaatccgggtcggatgcagtccctctcctgAC-TGTGTCTCCTACAGCTCCTCACTGGATCAGGGTGCAATCTCTTGCAGGGTTTTCAAGACCTCA--TAAT---ACACCC------CACAAGCTCTC---C----TCTAAtgccgagtgtgctctgcctgcccctctcagagagctctccattc-cc-cccac-tgctacgtg-acaggagggtgaacctcatgacctttaggtgcaggctccttgcttcctgttttcggctgggtttagaactggaaacaccaggaggaagtctggatgtgggag-agggagaagctgggaacgtttccctttttcccctctccttggccaggtgttggcaagggctgctccccggtgtgtccaCAGATCC-GTCCAGTGGGCTCCCTAAGAGC----CAGGCTCTTGCTGGGCTCCACAGCTATACGGCGCCTTGCTTCAGGCCAGCAGGCTGGGATGG--CTGCTTGG--- i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1337194 952 - 2164891 GATTGCAGGAATCTAGGCTCCGCCTtgctgattattcctcaatgaatgtattgagacccag----cctcttccttgaatttcaggcttgtatcaga--atgcctcattacagtctctattttgctacctacacagctcaaattcagcatgtccaaacc--actttccatcctctccgc-----aaacccgttcctcctgcagt-------gatttgtgagtaatggcttctcccttgcagccactcagggcagagatcctggagtc--cttctgatgcctctccttatctcatcactcagactcaat-catcagcaagcccagttggtgctaccgtcagaacatatcaagaatctcacttctcctttgcattttt-----------ctggct---agccatctt------cttaggccattg-------------tcccaggccgttgtccctctcacttgatgactgtagcagcctcctcatgtggtcctgcttcaccagtt--tcccttctgccttttttaacacatcagccggaaggaccttgtt-aaatccgagtcagatgcagtccctctcctgac-cgtgtctcctacagctccccactcgatcagggtgcaatctcttgcagggttttcaagacctca--taat---acaccc------cacggcatctc---c----tctaaTGCCGAGCATGCTAGGCCTGCCCCTCTCAGAGAGCTCTCCATTTTTC-CCCAC-TGCCACGTG-CCAGGAGGGTGAACCTCATGACCTTTAGGTGcagactccttgctttctgtgttcggctgggtttagaactggaaacaccaggaggaagtcaggatgtgggag-agggagaagctggggaagtttctctttttcccttctccttggccaggtgttggcaagggctgctccccggtgtgtccaCAGATCT-GTCCAGTGGGCTCCCTAAGACC----TAAGCTCTTGCTGGGCTCCATAGCTATACTGCGCCTTGCTTCAGGCCAGCAGGCTGGGATGG--CTGCTTGG--- i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1580903 941 - 1813869 GATTGCAGGAAtctagattccgtcttgctgattattcctcaacgaatgtgttgagacccaa----cctcttccttgaacttcaggcttgtatcaga--ttgcctcattaaagtctctattttgctacatacacagcacaaactccgcatgtccaaacc--actttccatcctgtccgc-----aaaccagttcctcctgcagagt-----gatttgttagtaatgacttctcccttgcagccactcagggcagagatcctggagtcgttttctgatgcctctccttatctcatcactcagatccaat-catcagcaagcccagctggtgctaccatcagaacatatcgagaatctcacttctcctttgcattttt-----------ctggct---agccgtctt------cttaggccatga--------------------------tccctctcacttgacgactgtaacagccgcctcatgtggtcctgcttcaccagtt--tcccttccgcctttttaaacacatcagccggaaggaccttgtt-aaatccaagtcggatgcagtccctctcctgac-tgtgtcttctgcaccttcccactcactcagggtgaaatctcttgcagggttttcacgacctca--taat---acaccc------cacgaccactc---c----tctgaTGCCGAGCGTGCCCTGCCTGCCCCTCTCAGAGAGCTCTCCATTCTTC-CCCAC-TGCTACATG-CCAGGAGGGTGAACCTCATGACCGTTAGGTAcaggctccttgctttctggtttcggctgggtttagaactggaaacaccaggaggaagtcgggatgtgggag-agggagaagctggggaagtttc--tttttcccttctccttggccaggtgttggcaagggctgctcccccgcgtgtccaCCGATCT-GTCCAGTGGGCTCCCTAAGACC----CAGGCTCTTGCTGGGCTCCATGGCTGTACCGCGCCTCGCTTCAGACCAGCAGGCTGGCACGG--CTGCTTGG--- i aotNan1.NW_018494782v1 I 81 C 0 s canFam3.chr1 56241118 961 + 122678785 ACtcttatggatttagtttccatctcactgactattccaaagttcatatcataagacccaggatttttttttcttgaactccaggattgtatggaa--attcctcactgaaacttctgcttggacctaaaaatagttcgaacttaatatgtccaaacctaaactgtgatcttctccccaaaccacgccaaccccttgtatggacatctcacatgtgttagtgaccacatctgccttccaggtgctcaggtcata-cttccggagccaccgtctg--gttcctccatccctcatcacacagatccagtccatccataaatctagct-gtgctgtcactaaagcatgtcaagaatctgactacatctctgaattttcagtgctgacaaccaactccaagctgtcctgggcacctccggatgtcg-------------caac---------tgtcttccatttaattagtgtgatgaaccctgaatgttcttctccttgcct------cttcctctgacctcactgacacagtcgccagaatgatctccctggaagttaagtcagatgcactcactctcctgat-gagggctcttctgacttccc-cttctctggaggaaaatccattacagtgcctgcaagactttgtgtactctcaccccccCCACACACAACCTCTC---TTGTTCCTtatgctggatatttcctgcttgtccatcttgttcaactccccactctttgcccacgtgttttgtgcccaggaggctgacctttatgacctgtatttatagggtccctttcctctggttt-------gatta-aatgggtgataccagcgggaagtaaggatgc-ggagacgagcacaggtggg---------CTGTTGTCCTTACTCTTGGTCAGGATTTGGCAGGACCTCCC----------------GAT---GCCCCATGACTCACCAGAAGCC----GTGGGTCTCACTGGGCTCAGTAACTGTGTCTGTCCTTTCTCC---TTCAGATCTTGGCATAGATTTACCTTGAAT i canFam3.chr1 C 0 C 0 e otoGar3.GL873575 10997265 5995 - 12073884 I e dasNov3.JH569188 664695 9804 + 760995 I a score=1378723.000000 s hg38.chr6_KB021644v2_alt 182975 137 + 185823 CTGATCACACCTCCATACTTCTCTTTT---GAATGTGCCATC-----TGCTT--CCTGCTAGGGCACTTATTTTCTTGCTATGCACCTGCCTG--------------------------TTGTTGTTTTCGTGGC-CTGGCCAGGTGGTCCTCCTTCCTATCACTTTAACAAC----------------A s panTro5.chr6 173645937 137 + 175400573 CTGATCACACCTCCATACTTCTCTTTT---GAATGTGCCATC-----CGCCT--CCTGCTAGGGCACTTATTTTCTTGCTATGCACCTGCCTG--------------------------TTGTTGTTTTCGTGGC-CTGGCCAGGTGGTCCTCCTTCCTATCACTTTAACAAC----------------A i panTro5.chr6 C 0 C 0 s panPan2.chr6 171871386 137 + 173848474 CTGATCACACCTCCATACTTCTCTTTT---GAATGTGCCATC-----CGCCT--CCTGCTAGGGCACTTATTTTCTTGCTATGCACCTGCCTG--------------------------TTGTTGTTTTCGTGGC-CTGGCCAGGTGGTCCTCCTTCCTATCACTTTAACAGC----------------A i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11557701 134 - 12463322 CTGATCACACCTCCATACTTCTCTTTT---GAATGTGCCATC-----TGCTT--CCTGCTAGGGCACTTATTTTCTTGCTATGCACCTGCC-----------------------------TGTTGTTTTTGTGGC-CTGGCCAGGTGGTCCTCCTTCCTATCACTTTAATAAC----------------A i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156388867 134 + 157873769 CTGATCACACCTCCATACTTCTCTTTT---GAAAGTGCCATC-----TGCTT--CCTGCCAGGGCACTTATTTTCTTGCTGTGCACCTCCC-----------------------------TCTTGTTTTCGTGAC-CTGGCCAGGTGGTCCTCTTTCCTATCACTTTAACAAC----------------A i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170415512 137 + 172585720 CTGATCACACCTCCACACTTCTCTTTT---GAATGTGCCATC-----TGCTT--CCTGCTAGGGCACTTATTTTCTTGCTATGCACCTCCCTA--------------------------TTGCTGTTTTCATGGC-CTGGCCAGGTGGTCCTCTTTCCTATCACTTTAACAAC----------------A i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169158795 137 - 170955103 CTGATCACACCTCCACACTTCTCTTTT---GAATGTGCCATC-----TGCTT--CCTGCTAGGGCACTTATTTTCTTGCTATGCACCTCCCTA--------------------------TTGCTGTTTTCATGGC-CTGGCCAGGTGGTCCTCCTTCCTATCACTTTAACAAC----------------A i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8444685 137 + 10161646 CTGATCACACCTCCACACTTCTCTTTT---GAACGTGCCATC-----TGCTT--CCTGCTAAGGCACTTATTTTCTTGCTATGCACCTCCCTG--------------------------TTGTTGTTTTCATGGC-CTGGCCAGGTGGTCCTCCTTCCTATCACTTTAACAAC----------------A i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1475870 137 + 3144229 CTGATCACATCTCCACACTTCTCTTTT---GAATGTGTCATC-----TGCTT--CCTGCTAGGGCACTTATTTTCTTGCTATGCACCTCCCTA--------------------------TTGCTGTTTTCATGGC-CTGGCCAGGTGGTCCTCCTTCCTATCACTGTAACAAC----------------A i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96760208 137 + 98384682 CTGATCACCCCTCCACACTTCTCTTTT---GAACGTGCCATC-----TGCTT--CCTGCTAGGGCACTTATTTTCTTGCTATGCACCTCCCTG--------------------------TTGTTGTTTTCATGGC-CTGGCCAGGTGGTCATCCTTCCTATCACTTTAACAAC----------------A i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8327736 137 - 10857215 CTGATCACACCTCCACACTTCTCTTTT---GAACGTGCCATC-----TGCTT--CCTGCTAGGGCACTTATTTTCTTGCTATGCACCTCCCTG--------------------------TTGTTGTTTTCATGGC-CTGGCCAGGTGGTCCTCCTTCCTATCACTTTAACAAC----------------A i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15682451 136 - 23502949 CTGATCACACCTCCACACTTCTCTTTT---GAACGTGCCATC-----TGCTT--CCTGCTAGGGCACTTATTTT-TTGCTATGCACCTCCCTA--------------------------TTGTTGTCTTCATGGC-CTGGCCAGGTGGTCCTCCTTCCTATCACTTTAACAAC----------------A i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169972225 137 + 171630274 CTGATTGCACCTCCATGCTTCTCCTTT---TGATGTGCCACC-----TGCTT--CCTGCTAGGGCACCTACTTTCTTGCTACACACCTCCCTG--------------------------TTGTTTTCTTCGTGGC-CCGGCCCGGTGGTCCTCCTTCCTAATGCTTTAACAAC----------------A i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1367787 136 - 2905041 CTGATTGCACCCCCATGCTTCTCCTTT---TGATGTGCCATC-----CGCTT--CCTGCTAGGGCAACCATTTTCTTGCTACACACCTCCCAG---------------------------TGTTTTCTTCGTGGC-CTGGCCCGGTGGTCCTCCTTCCTAATGCTTTAACAAC----------------A i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1338146 137 - 2164891 CTGATTGCACCTCCACGCTTCTCCTTT---TGATGTGCCATC-----TGCTT--CCTGCTAGGGCACCTATTTTCTTGctacccacctcccca--------------------------ttgttttcttcgtggc-ctggcccggtggtcctccttcctaatgctttaacaac----------------a i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1581844 134 - 1813869 CTGACCGCACCTCCATGCTTCTCCTTT---TGATGTGCCATC-----TGCTT--CCTGCTAGGGCACCCGTTTTCCTGCTACACACCTCCCCA--------------------------TTGTTTTCTTCGTGGC-CTGGCCCGGTGGTCCTCCTTCCTAACGCTTT---AAC----------------A i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 11003260 179 - 12073884 CTGGTCACAGCCCC-CATTGTGCTGTTGGAGGAGGGGCCTCC-----TGCTT--CCTGCTAGGGCACCTCTTTTCCAGCTGTGCACTGCCCTGGCTGTTTTTTATTTGTTTGTTTGTTTTTGTTTTCTTTTTCACGCTGGCTGTGGTGTCCTCCCTCC---CACTCTCACAGTGGCCTGCCCTGCCCGGA i otoGar3.GL873575 I 5995 C 0 s canFam3.chr1 56242079 132 + 122678785 CTGACCACATCTTCATATCCCTTTTTT---GTATATGCCATCTTTGTTACTTAGTTTGCTGGGGCCCTGTGTTTGCTATTGTGCCCC--------------------------------TTGTCATCT---TGGCTCTGGCCAAGTAGTCCTCTTTCCTA----TTTAACACC----------------A i canFam3.chr1 C 0 I 73 e dasNov3.JH569188 664695 9804 + 760995 I a score=974505.000000 s hg38.chr6_KB021644v2_alt 183112 95 + 185823 AGCATGAAtttgaagttgccatcatttctacctagaatgtgcttccagatatccatgtgcatcactctccaggcttcctAAACAGAAGGATCGAG s panTro5.chr6 173646074 95 + 175400573 ACCATGAATTTGAAGTTGCCATCATTTCTACCTAGAATGTGCTTCCAGATATCCATGTGCATCACTCTCCAGGCTTCCTAAACAGAAGGATCGAG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171871523 95 + 173848474 ACCATGAATTTGAAGTTGCCATCATTTCTACCTAGAATGTGCTTCCAGATATCCATGTGCATCACTCTCCAGGCTTCCTAAACAGAAGGATCGAG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11557835 95 - 12463322 AGCATGAATTTGAAGTTGCCATCATTTCTACCTAGAATGTGCTTCCAGATATCCATGTGCATCACTCTCCAGGCTTCCTAAACAGAAGGATCGAG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156389001 95 + 157873769 AGCATGAATTTGAAGTTGCCATCATTTTTACCTGGAATGTGCTTCCAGACATCCATGTGCATCACTCTCCAGGCTTCCTAAACAGAAGGATCGAG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170415649 95 + 172585720 AGCATGAATTTGAAGTTGTCATCATTTCTACATGGAATGCACTTCCAGACATCCATGTGCATCACTCTCCAGGCTTTCTAAACAGAAGGATCGAG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169158932 95 - 170955103 AGCATGAATTTGAAGTTGTCATCATTTCTACATGGAATGCACTTCCAGACATCCATGTGCATCACTCTCCAGGCTTTCTAAACAGAAGGATCGAG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8444822 95 + 10161646 AGCATGAATTTGAAGTTGTCATCATTTCTACATGGAATGCACTTCCAGACATCCATGTGCATCACTCTCCAGGCTTTCTAAACAGAAGGATTGAG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1476007 95 + 3144229 AGCATGAATTTGAAGTTGTCATCATTTCTATGTGGAATGCGCTTCCAGACATCCATGTGCATCACTCTCCAGGCTTTCTAAACAGAAGGATCGAG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96760345 95 + 98384682 AGCATGAATTTGAAGTTGTCATCATTTCTACATAGAATGCGCTTCCAGACATCCATGTGCATCACTCTCCAGGCTTTCTAAACAGAAGGATTGAG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8327873 95 - 10857215 AGCATGAATTTGAAGTTGTCATCATTTCTACGTGGAATGCGCTTCCAGACATCCATGTGCATCACTCTCCAGGCTTTCTAAACAGAAGGATTGAG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15682587 95 - 23502949 AGCATGAATTTGAAGTTGTCATCATTTCTACGTGGAATGTGCTTCCAGACATCCATGTGCATCACTCTCCAGGCTTTCTAAACAGAAGGATTGAG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169972362 92 + 171630274 AGCATGAATTTGAAGTTGCCATCATTTCTGCCTGGAATGTACTTCCATATATCCATGGGCAGCACTCTCCAGGCTTCCTA---AGAAGGATCGAG i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1367923 95 - 2905041 AGCATGAATTTGAAGTTGCCGTCATTTCTACCTGGAATGCACTTCCAGTTATCCATGGGCAGCACTCTCCAGGCTTTCTAAGCAGAAGGATTGAG i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1338283 95 - 2164891 agcatgaatttgaagttgccgccatttctacctggaatgcacttccagatatccatgggcagcactctcCAGGCTTTCTAAGCAGAATGATCGAG i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1581978 95 - 1813869 AGCATGAGTTTGAAGTTGCCCCCATTTCTACCTGGAATGCACTTCCAGATATCCGTGGTCAGCACTCTCCAGGCTTTCTAAGCAGAAGGATCGGG i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 11003439 86 - 12073884 GCCCTGAACTGGGG--------CCTTTCTGAGTGGAGTGTCCTTGGGGGCATCTGTGTGGGTCACTCCCTGGGCTGTCCAAACA-AAGGATCAAG i otoGar3.GL873575 C 0 I 2 e dasNov3.JH569188 664695 9804 + 760995 I e canFam3.chr1 56242211 73 + 122678785 I a score=331571.000000 s hg38.chr6_KB021644v2_alt 183207 36 + 185823 TGTTgtgggtagtgactaactgggggcagtggtgca s panTro5.chr6 173646169 36 + 175400573 TGTTgtgggtagtgactaactgggggcagtggtgca i panTro5.chr6 C 0 C 0 s panPan2.chr6 171871618 36 + 173848474 TGTTgtgggtagtgactaactgggggcagtggtgca i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11557930 36 - 12463322 TGTTgtgggtagtgactaactgggggcagcggtgca i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156389096 36 + 157873769 TGTTgtgcacagtgactaactgggggcagtggtgca i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170415744 36 + 172585720 TGTTgtggacagtgactaactggggacagtggtgca i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169159027 36 - 170955103 TGTTgtggacagtgactaactggggacagtggtgca i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8444917 36 + 10161646 TGTTgtggatagtgattgactggggacagtggtgca i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1476102 36 + 3144229 TGTTgtggatagtgactaactgggggcggtggtgca i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96760440 36 + 98384682 GGTTgtggatagtgactaactggggacagtggtgca i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8327968 36 - 10857215 TGTTgtggatagtgactaactggggacagtggtgca i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15682682 36 - 23502949 TGTTgtggatagtgaccaactgggggcagtggtgca i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169972454 35 + 171630274 GGTTGTGGGTGGTGACTAGCTGGGG-CAGCGGTGCA i calJac3.chr4 C 0 I 1396 s saiBol1.JH378287 1368018 35 - 2905041 GGTTGCAGgcagtgactaactgggg-cagcggtgca i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1338378 35 - 2164891 GATTgtggatagtgactaactgggg-cagcggtgca i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1582073 35 - 1813869 GGTTgtgggtagtgactaactgggg-cagcggtgca i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 11003525 2 - 12073884 I e dasNov3.JH569188 664695 9804 + 760995 I e canFam3.chr1 56242211 73 + 122678785 I a score=334089.000000 s hg38.chr6_KB021644v2_alt 183243 49 + 185823 tacagtaaagggatttacaaaggcagtttacc----------------------tttacctacaaggtaaa s panTro5.chr6 173646205 49 + 175400573 tacagtaaagggatttacaaaggcagtttact----------------------tttccctacaaggtaaa i panTro5.chr6 C 0 C 0 s panPan2.chr6 171871654 49 + 173848474 tacagtaaagggatttacaaaggcagtttact----------------------tttacctacaaggtaaa i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11557966 49 - 12463322 tacagtaaagggatttacaaaggcagtttacc----------------------tttacctacaaggtaaa i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156389132 71 + 157873769 tacagtaaagggatttacaaaggcagtttacctttacctacaaggtaaagaaagtttacctacaaggtaaa i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170415780 49 + 172585720 tacagtaaaggaatttacaaaggcagtttacc----------------------tttacctacaaggcaaa i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169159063 49 - 170955103 tacagtaaaggaatttacaaaggcagtttacc----------------------tttacctacaaggcaaa i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8444953 49 + 10161646 tacagtaaaggaatttacaaaggcagtttacc----------------------tttacctacaaggcaaa i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1476138 49 + 3144229 tacagtaaaggaatttacaaaggcagtttacc----------------------tttacctacaaggcaaa i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96760476 49 + 98384682 tacagtcaaggaatttacaaaggcagtttacc----------------------tttacctacaaggcaaa i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8328004 49 - 10857215 tatggtaaaggaatttacaaaggcagtttacc----------------------tttacctacaaggcaaa i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15682718 49 - 23502949 tacagtaaaggaatttacaaaggcagtttacc----------------------tttacctacaaggcaaa i colAng1.NW_012114488v1 C 0 C 0 s saiBol1.JH378287 1368053 37 - 2905041 tgcagtaaaggaatttacaaaggcagt---------------------------tgt-------aggcaat i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1338413 37 - 2164891 tgcagtaaaggaatttacaaaggcagt---------------------------ggt-------aggtaat i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1582108 37 - 1813869 tgcagtgaaggaatttacaaaggcagc---------------------------tgt-------aggtaat i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 11003525 2 - 12073884 I e calJac3.chr4 169972489 1396 + 171630274 I e dasNov3.JH569188 664695 9804 + 760995 I e canFam3.chr1 56242211 73 + 122678785 I a score=3158079.000000 s hg38.chr6_KB021644v2_alt 183292 346 + 185823 ggaaggtggatttgttaaagaaagtatgaaaatatgttgcaaggatgcaatgggtagatcagcaagaaaggagctgagttccaggagacaaaagcttgctgggtattttacaggatggtgcttgtgctggagaggaatacgtgcagtactggtaacactaagattgcagtgagcgaacctgcatttttctgtcagctgaggtgtctgctggtaagtcaggcatagggagattgtgtgttaga-tgggctatttgcgcaggagggctgtgtgtcctggaccatgaagaaaggcagatttgtagtttatctgctttgtctttttgctttccctgctccccctag---------------------cctgg s panTro5.chr6 173646254 346 + 175400573 gaaaggtggatttgttaaagaaagtatgaaaatatgttgcaaggatgcaatgggtagatcagcaagaaaggagctgagttccaggagacaaaagcttgctgggtattttacaggatggtgcttgtgctggagaggaatacgtgcagtactggtaacactaagattgcagtgagcgaacctgcatttttctatcagctgaggtgtctgctggtaagtcaggcatagggagattgtttgttaga-tgggctatttgcgcaggagggctgtgtgtcctggaccatgaagaaaggcagatttgtagtttatctgctttgtctttttgctttccctgctccccctag---------------------cctgg i panTro5.chr6 C 0 C 0 s panPan2.chr6 171871703 346 + 173848474 gaaaggtggatttgttaaagaaagtatgaaaatatgttgcaaggatgcaatgggtagatcagcaagaaaggagctgagttccaggagacaaaagcttgctgggtattttacaggatggtgcttgtgctggagaggaatacgtgcagtactggtaacactaagattgcagtgagcgaacctgcatttttctatcagctgaggtgtctgctggtaagtcaggcatagggagattgtgtgttaga-tgggctatttgcgcaggagggctgtgtgtcctggaccatgaagaaaggcagatttgtagtttatctgctttgtctttttgctttccctgctccccctag---------------------cctgg i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11558015 346 - 12463322 gaaaggtggatttgttaaagaaagtatgaaaatacgttgcaaggatgcaatgggtagatcagcaagaaaggagctgagttccaggagacaaaagcttgctgggtattttacaggatggtgcttgtgctggagaggaatacgtgcagtactggtaacactaagattgcagtgagcgaacctgcatttttctatcagctgaggtgtctgctggtaagtcaagcatagggagattgtgtgttaga-tgggctatttgcgcaggagggctgtgtgtcctggaccatgaagaaaggcagatttgtagtttatctgctttgtctttttgctttccctgctccccctag---------------------cctgg i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156389203 345 + 157873769 gaaaggtggacttgttaaagaaagtatgaaaatacgttgcaaggatgcaatgggcagatcagcaagaaaggagctgagttccaggagacaaaaccttgctgggtgttttataggatggtgcttgtgctggagagggatatgtgcagtactggtaacactaagattgcagtgagcgaacttgcatttttcta-cagctgaggtgtctgctggtaagtcaggcatagggagattgtgtgttaga-tgggctatttgcacaggagggctgtgtgtcctggaccatgaagaaaggcagatttgtagtttatctgctttgtctttttgctttccctgctccccctag---------------------cctgg i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170415829 346 + 172585720 gaaaggaggatttattaaagaaagtatgaaaatatgttgcaaggatgcaatgggtagatcagcaagaaagatgctgagttccaggagacaaaagcttgctgagtattttataggatggtgcttgtgctggagagggatatgtgcagtactggtaacactaagattgctgtgagctcacttgcatttttctatcagctgaggtgtctgctggtaagtcaggcatagggagattgtgtgttaga-tggactatttgtgcaggagggctgtgtgtcctgcaccatgaagaaaggcagatttataatttatctgctttgtctttttgccttccctgctccccctag---------------------cctgg i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169159112 346 - 170955103 gaaaggaggatttattaaagaaagtatgaaaatatgttgcaaggatgcaatgggtagatcagcaagaaagatgctgagttccaggagacaaaagcttgctgagtattttataggatggtgcttgtgctggagagggatatgtgcagtactggtaacactaagattgctgtgagctcacttgcatttttctatcagctgaggtgtctgctggtaagtcaggcatagggagattgtgtgttaga-tggactatttgtgcaggagggctgtgtgtcctgcaccatgaagaaaggcagatttataatttatctgctttgtctttttgccttccctgctccccctag---------------------cctgg i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8445002 346 + 10161646 gaaaggaggatttattaaagaaagtatgaaaatatgctgcaaggatgcaatgggtagatcagcaagaaagatgctgagttccaggagacaaaagcttgctgagtattttataggatggtccttgtgctggagagggatatgtgcagtactggtaacactaagattgcagtgagctcacttgcatttttctatcagctgaggtgtctgctggtaagtcaggcatagggagattgtgtgttaga-tggactatttgtgcaggagggctgtgtgtcctacaccatgaagaaaggcagatttataatttatctgctttgtctttttgctttccctgctccccctag---------------------cctgg i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1476187 346 + 3144229 gaaaggaggatttattaaagaaagtatgaaaatatgttgcaaggatgcaatgggtagatcagcaagaaagatgctgagttccaggagacaaaagcttgctgagtattttataggatggtgcttgtgctggagagggatatgtgcagtactggtaacactaagattgctgtgagctcacttgcatttttctatcagctgaggtgtctgctggtaagtcaggcatagggagattgtgtgttata-tggactatttgtgcaggagggctgtgtgtcctgcaccatgaagaaaggcagatttataatttatctgctttgtctttttgccttccctgctccccctag---------------------cctgg i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96760525 346 + 98384682 gaaaggaggatttattaaagaaagtacgaaaatatgttgcaaggatgcaatgggtagatcagcaaggaagatgctgagttccaggagacaaaagcttgctgggtattttataggatggtgcttgtgctggagagggatatgtgcagtactggtaacactaagattgctgtgagctcacttgcatttttctatcagccgaggtgtctgctggtaagtcaggcatagggagattgtgtgttagaccggactatttgtgc-ggagggctgtgtgtcctgcaccatgaagaaaggcagatttatagtttatctgctttgtctttttgccttccctgctccccctag---------------------cctgg i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8328053 346 - 10857215 gaaaggaggatttattaaagaaagtatgaaaatatgttgcaaggatgcaatgggtagatcagcaagaaagatgctgagttccaggagacaaaagcttgctgagtattttataggatggtgcttgtgctggagagggacatgtgcagtactggtaacactaagattgctgtgagctcacttgcatttttctatcagctgaggtgtctgctggtaagtcaggcatagggagattgtgtgttaga-tggactatttgtgcgggagggctgtgtgtcctgcaccatgaagaaaggcagatttataatttatctgctttgtctttttgccttccctgctccccctag---------------------cctgg i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15682767 342 - 23502949 gaaaggaggatttattaaagaaagtatgaaaatatgttgcaaggatgcaatgggtagatcagcaagaaagatgctgagtaccaggagacaaaagcttgc----tattttataggatagtgcttgtgctggagagggatatgtgcagtactggtaacactaagattgcagtgagctcacttgcatttttctatcagctgaggtgtctgctggtaagtcaggcatagggagactgtgtttcaga-tggactatttgtgcaggagggctgtgtgtcctgcaccatgaagaaaggcagatttataatttatctgctttgtctttttgctttccctgctccccctac---------------------cccgg i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169973885 359 + 171630274 gaaaggcagatttattcaaggaagtatgaaaatgcatggcaaggatgcaccgggcaggtcagcaagaaaggaggtgagttccaggagacgaaagcttgccgggtgttttataggacggtacttgtgct-gagaaggctacatgcagcactgataacag-aagattgcagggagctaactggc-cttttccatcagcggaggtgtgtggc-gtaagtcgggagtagggagccggtgtgttaga-tgggctatttgcacaggagggctatgtatcctggaccatgaagaaaggcagacttgtggttgctctgctttctctc----ctttctctgctccccctttttctctccttcctctgatcccctgga i calJac3.chr4 I 1396 C 0 s saiBol1.JH378287 1368090 341 - 2905041 gaaaggcagatttattaaaggaagtatgaaaatgcatagccaggatgcgatgggtaagtcagcaagaaaggaggtgagttccaggagacaaaagcttgctgggtgttttataggagggtgcttgtgctggagaaggctacatgcagtactgaaaacagcaagattgca-ggagctaactggcatttttccatcagcggaggtgtctgctggtaagttgggaatagggagacggcgtgttaga-agggttatttgcacaggagggctgtgtatcctggaccatgaggaaaggcagacttgtggttgatctgcttcctctc----ctttctctgctcccccttg---------------------cctga i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1338450 344 - 2164891 gaaaggcggatttattaaaggaagtatgagaatgcatggcaaggatgcgatgggtaggtcagcaagaaaggaggtgagttccaggagacaaaagcttgctgggtgttttatgggagggtgattgtgctggaggaggctacatgtagtactgataacagcaagattgca-ggagctaactggcatttttccatcagtggaggcgtctggtggtaagtcgggaatagggagatggcatgttaga-tgggttatttgcacaggagggctatgtatcctggaccatgaagaaaggcagacttgtggttgatctgctttgtctcctt-ctttctctgctcccccttg---------------------cctga i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1582145 343 - 1813869 gaaaggcaggttgattaaaggaagggtgaaaatgcacggccaggatgcagtgggtaggtcagcaaggaaggaggtgagctccaggaggcgaaagctcaccgggcgttttacgggagggcgcttgtgctggagaaggctgcgcgcaggactgacgacagcaagactgcggggagctaactggcatttttccatcagcggaggcgtctggtggcaggtcgggaatagggagatcgtgtg-tagg-tggcttatttgcacaggagggctgtgtatcctggaccacgaagaaaggcagaa-tgtggttgatccgctttctctcctt-ctttctctgctcccccttg---------------------tctga i aotNan1.NW_018494782v1 C 0 C 0 e otoGar3.GL873575 11003525 2 - 12073884 I e dasNov3.JH569188 664695 9804 + 760995 I e canFam3.chr1 56242211 73 + 122678785 I a score=320886.000000 s hg38.chr6_KB021644v2_alt 183638 33 + 185823 ctcctt----ttcctaatcaggaccccacaCCAGATC s panTro5.chr6 173646600 33 + 175400573 ctcctt----ttcctaatcaggaccccacaCCAGATC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171872049 33 + 173848474 ctcctt----ttcctaatcaggaccccacaCCAGATC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11558361 33 - 12463322 ctcctt----ttcctaatcaggaccccacaTCAGATC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156389548 33 + 157873769 ctcctt----ttcctaatcaggaccgcacaTCAGATC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170416175 33 + 172585720 ctcctt----ttcctaatcaggaccccacaTCAGATA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169159458 33 - 170955103 ctcctt----ttcctaatcaggaccccacaTCAGATA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8445348 33 + 10161646 ctcctt----ttcctaatcaggaccccacaTCAGATA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1476533 33 + 3144229 ctcctt----ttcctaatcaggaccccacaTCAGATA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96760871 33 + 98384682 ctcctt----ttcctaatcaggaccccacaTCAGATA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8328399 33 - 10857215 ctcctt----ttcctaatcaggactccacaTCAGATA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15683109 33 - 23502949 ctcctt----ttcctaatcaggaccccacaTCAGATA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169974244 32 + 171630274 t-cctt----ttcctacttaggaccccacaGCAGATA i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1368431 32 - 2905041 c-tctt----ttcctacttaggaccccacaTCAGATA i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1338794 33 - 2164891 ctcctt----ttcctacttaggatcccacaTCAGATA i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1582488 33 - 1813869 ctcctt----ttcctacttaggacctcacaTCAGATA i aotNan1.NW_018494782v1 C 0 C 0 s canFam3.chr1 56242284 36 + 122678785 CTCCTTGGGCTTTCCAAACACAACCAAACATCAGAG- i canFam3.chr1 I 73 C 0 e otoGar3.GL873575 11003525 2 - 12073884 I e dasNov3.JH569188 664695 9804 + 760995 I a score=73746.000000 s hg38.chr6_KB021644v2_alt 183671 5 + 185823 ACACC s panTro5.chr6 173646633 5 + 175400573 ACACC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171872082 5 + 173848474 ACACC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11558394 5 - 12463322 ACACC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156389581 5 + 157873769 ACACC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170416208 5 + 172585720 ACACC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169159491 5 - 170955103 ACACC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8445381 5 + 10161646 ACACC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1476566 5 + 3144229 ACACC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96760904 5 + 98384682 ACACC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8328432 5 - 10857215 ACACC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15683142 5 - 23502949 ACACC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169974276 5 + 171630274 ACACC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1368463 5 - 2905041 ACACC i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1338827 5 - 2164891 ACACC i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1582521 5 - 1813869 ACACC i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 11003527 5 - 12073884 ACACC i otoGar3.GL873575 I 2 C 0 s canFam3.chr1 56242320 5 + 122678785 ACACC i canFam3.chr1 C 0 C 0 e dasNov3.JH569188 664695 9804 + 760995 I a score=3610126.000000 s hg38.chr6_KB021644v2_alt 183676 335 + 185823 CTCACTCCCAAGTC-TGGTCATTTTCTTTAAAGTTAGAATATAT--------CCACTTCCCACCGCAATGCTCTGGGTTCCCT-------TTATCCTGGCTTACGTCACATAGAAAAGCGTAATTTATAACTTAACAAAAGTGA-GTAGCTAACGAAGAAAGCAGATCATACATGACACC---ATAAACTGTAAACAATAAAAGCTGAATTGGTAAAGATCTTCTAACTGGAAAGCCCCATACC--GAGATGGTGttaaatgcatcgtttctataaatgctcatggtatttttataaggtggacacta---tta----ttt---catcttagaa---------------atcagcaa---agagag-----------------gctttgagaaaggaacta----a s panTro5.chr6 173646638 335 + 175400573 CTCACTCCCAAGTC-TGGTCATTTTCTTTAAAGTTAGAATATAT--------CCACTTCCCACCGCAATGCTCTGGGTTCCCT-------TTATCCTGGCTTACGTCACATAGAAAAGCGTAATTTATAACTTAACAAAAGTGA-GTAGCTAAAGAAGAAAGCAGATCATACATGACACC---ATAAACTGTAAACAATAAAAGCTGAATTGGTAAAGATCTTCTAACTGGAAAGCCCCATACC--GAGATGGTGttaaatgcatcgtttctataaatgctcatggtatttttataaggtggacacta---tta----ttt---catcttagaa---------------atcagcaa---agagag-----------------gctttgagaaaggaactc----a i panTro5.chr6 C 0 C 0 s panPan2.chr6 171872087 335 + 173848474 CTCACTCCCAAGTC-TGGTCATTTTCTTTAAAGTTAGAATATAT--------CCACTTCCCACCGCAATGCTCTGGGTTCCCT-------TTATCCTGGCTTACGTCACATAGAAAAGCGTAATTTATAACTTAACAAAAGTGA-GTAGCTAAAGAAGAAAGCAGATCATACATGACACC---ATAAACTGTAAACAATAAAAGCTGAATTGGTAAAGATCTTCTAACTGGAAAGCCCCATACC--GAGATGGTGttaaatgcatcgtttctataaatgctcatggtatttttataaggtggacacta---tta----ttt---catcttagaa---------------atcagcaa---agagag-----------------gctttgagaaaggaacta----a i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11558399 335 - 12463322 CTCACTGCCAAGTC-TGGTCATCTTCTTTAAAGTTAGAATATAT--------CCACTTCCCACCGCAATGCTCTGGGTTCTCT-------TTATCCTGGCTTACTTCACATAGAAAAGCATAATTTATAACTTAACAAAAGTGA-GTAGCTAAAGAAGAAAGCAGATCATACATGACACC---ATAAACTGTACACAATAAAAGCTGAATTGGTAAAGATCTTCTAACTGGAAAGCCCCATACC--GAGATGGTGttaaatgcatcgtttctataaatgctcatggtatttttataaggtggacacta---tta----ttt---catcttagaa---------------atcagcaa---agagag-----------------gctttgagaaaggaacta----a i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156389586 335 + 157873769 CTCACTCCCAAGTC-TGGTCATTTTCTTTAAAGTTAGAATATAT--------CCACTTCCCACTGCAATGCTCTGGATTCCCT-------TTATCCTGGCTTACTTCATATAGAAAAGCATAATTTATAACTTAACAAAACTGA-GTAGCTAAAGAAGAAAGCAGATCATACATGACACC---ATAAACTGTAAACAATAAAAGCTGAATTGGTAAAGATCTTCTAACTGGAAAGCCCCATACC--AAGATGGTGTCAAatgcatcgtttctataaatgttcatggtatttttataaggtggacagta---tta----ttt---catcttagaa---------------atcagtaa---ggagag-----------------gctttgagaaaggaacta----a i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170416213 333 + 172585720 CTCACTCCCAAGGC-TGGTCATTTTGTTTAAAGTTAGAATATAT--------CCACTTCGCCCTGCAATGCTCTAGATTCCCT-------TTATCTTTGCTTACTTCACATAGAAAAGCATAATTTATAACTTAACAAAAGTGA-GTAGCTAAAGAAGAAAGCAGGTCATATATGACACC---ATAAACTGTAAACAATAAAAGCTGAATTGGTGAAGATCTTCTAACTGGAAAGCCCCATACT--GAGATGGTGttaaatgcatcgtttctataaatgttcatggtatttttatgaggtggacacta---tta----ttt---catcttataa---------------atcagtaa-----acag-----------------gctttgagaaaggaatta----a i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169159496 333 - 170955103 CTCACTCCCAAGGC-TGGTCATTTTGTTTAAAGTTAGAATATAT--------CCACTTCGCACTGCAATGCTCTAGATTCCCT-------TTATCTTTGCTTACTTCACATAGAAAAGCATAATTTATAACTTAACAAAAGTGA-GTAGCTAAAGAAGAAAGCAGGTCATACATGACACC---ATAAACTGTAAACAATAAAAGCTGAATTGGTGAAGATCTTCTAACTGGAAAGCCCCATACT--GAGATGGTGttaaatgcatcgtttctataaatgttcatggtatttttatgaggtggacacta---tta----ttt---catcttataa---------------atcagtaa-----acag-----------------gctttgagaaaggaatta----a i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8445386 333 + 10161646 CTCACTCCCAAGGC-TGGTCATTTTGTTTAAAGTTAGAATATAT--------CCACTTCCCACTGCAATGCTCTGGAGTCCCT-------TTATCTTGGCTTACTTCACATAGAAAAGCATAATTTATAACTTAACAAAAGTGA-GTAGCTAAAGAAGAAAGCAGGTCATACATGACACC---ATAAACTGTAAACAATAAAAGCTGAATTGGTAAAGATCTTCTAACTGGAAAGCCCCATACT--GAGATGGTGTAAAatgcatcgtttctataaatgttcatggtatttttatgaggtggacacta---tta----ttt---catcttataa---------------atcagtaa-----acag-----------------gctttgagaaaggaatta----a i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1476571 333 + 3144229 CTCACTCCCAAGGC-TGGTCATTTTGTTTAAAGTTAGAATATAT--------CCACTTCCCACTGCAATGCTCTAGATTCCCT-------TTATCTTGGCTTACTTCACATAGAAAAGCATAATTTATAACTTAACAAAAGTGA-GTAGCTAAAGAAGAAAGCAGGTCATACATGACACC---ATAAACTGTAAACAATAAAAGCTGAATTGGTAAAGATCTTCTAACTGGAAAGTCCCATACT--GAGACAGTGttaaatgcatcatttctataaatgttcatggtatttttatgaggtggacacta---tta----ttt---catcttataa---------------atcagtaa-----acag-----------------gctttgagaaaggaatta----a i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96760909 333 + 98384682 CTCACTCCCAAGGC-TGGTCATTTTGTTTAAAGTTAGAATATAT--------CCACTTCCCACTGCAACGCTCTAGATTCCCT-------TTATCTTGGCTTACTTCACATAGAAAAGCATAATTTATAACTTAACAAAAGTGA-GTAGCTAAAGAAGAAAGCAGGTCATACATGACACC---ATAAACTGTAAACAATAAAAGCTGAATTGGTAAAGATCTTCTAACTGGAAAGCCCCATACT--GAGATGGTGttaaatgcatcgtttctataaatgttcatggtatttttatgaggtcgacacta---tta----ttt---catcttataa---------------atcagtaa-----acag-----------------gctttgagacaggaatta----a i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8328437 333 - 10857215 CTCACTCCCAAGGC-TGGTCATTTTGTTTAAAGTTAGAATATAT--------CCACTTCCCACTGCAATGCTCTGGAGTCCCT-------TTATCTTGGCTTACTTCACATAGAAAAGCATAATTTATAACTTAACAAAAGTGA-GTAGCTAAAGAAGAAAGCAGGTCATACATGACACC---ATAAACTGTAAACAATAAAAGCTGAATTGGTAAAGATATTCTAACTGGAaagccccatact--gagatggtgttaaatgcatcatttctataaatgttcatggtatttttatgaggtggacacta---tta----ttt---catcttataa---------------atcagtga-----acag-----------------gctttgagaaaggaatta----a i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15683147 333 - 23502949 CTCACTCCCAAGTC-TGGTCATTTTGTTTAGAGTTAGAATATAT--------CCACTTCCCACTGCAATGCCCTGGATTCCCT-------TTATCTTGCCTTACTTCACATAGAAAAGCATAATTTATAACTTAACAAAAGTGA-GTAGCTAAAGAAGAAAACAGGTCATACATGACACC---ATAAACAGTAAACAATAAAAGCTGAATTGGTAAAGATCTTCTAGCTGGAaagccccatact--gagatggtgttaaatgcattgtttctataaatgttcatggtatttttatgaggtggacacta---tta----ttt---cgtcttataa---------------atcagtaa-----acag-----------------gctttgagaaaggaatga----a i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169974281 335 + 171630274 CTCACTCCCAAGTC-TGATCGTTTCATTTAAAGTTCTAATAGAG--------CCACTTCCCACTGCAATACTCTGGATTCCCT-------TTATCCTGGCTTACTTCACACAGAAAAGCATAATTTATAACTTAACAAAAGTGA-GCCGCTAGAGAATAAAGAAGCTCATATGTGACACC---ATAAACTGTGAACAATAAAAGCTGAGTTGGTAAAGATCTTCTAACTGGAaagccccatgct--gagatgatgttaaatgcatcgtttctgtacatgttcatgggattcctatgaggtggacactg---tta----ttt---catcttggaa---------------atcagtaa---acagag-----------------gctttgagaagagaacta----a i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1368468 335 - 2905041 CTCACTCCCAAGTC-TGATCATTTTGTTTAAGGTTATGACATAG--------CCACTTCCCACTGCAACACTCTGGATTCCCT-------TTATCCTGGCTTACTTCACATAGAAAAGCATAATTTATAACTTAACAAAAGTGA-GTAGCTAGAGAAGAAAGCAGATCATAAATGACACC---ACAAACTATGAACTATAAAAGCTGAATTGGTAAAGATCTTCTAACCGGAAAGCCCCACGCT--GAGATGGTGttaaatgcatcgttcctatacatgttcatgggattcctaggaggtggacacta---tta----ttt---catcttggaa---------------atcagtaa---acagag-----------------gctttgagaaaagaacta----a i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1338832 332 - 2164891 CTCACTTCCAAGTC-TGATCGTTTTGTTTAAAGTTATAACATAG--------CCACTTCCCACTGCGACACCCTGGATTCCCT-------TTATCCTGGCTTACTTCACATAGAAAAGCATAATTTATAACTT---AAAAGTGA-ATAGCTAGATAAGAAAGCAGATCATACATGACACC---ATAAACTATGAACAATAAAAGCTGAATTGGTAAAGATCTTCTAACTGGAaagccccatgct--gagacagtgttaaatgcatcgtttctataaatgttcatgggattcctaggaggtggacactg---tta----ttt---catcttggaa---------------atcagtaa---acagag-----------------gctttgagaaaagaacga----a i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1582526 319 - 1813869 CTCACTCCCAAGCC-CGATCATTTTGTTTAAAGTT-----ATAG--------CCAC-TCCCACTGCAACACTCTGGATTCCCT-------TTATCCTGGCTCGCCTCACATGGAAAAGCAGGATTTATAACTTAACAAAAGTGA-GTAGCTAG----------AGCTCATACATGACACC---ATAAACTATGAACAATAAAAGCTGAATTGGTAAAGATCTTCTAACTGGAaagccccacgct--gagacggtgttaaatgcatcgtttctagaaatgttcatgggattcctatgaggtggacacta---tta----ttt---catcttggaa---------------atcagcaa---acagag-----------------gctttgagagaagaacta----a i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 11003532 282 - 12073884 CTCAGTCCCAAGTCTTGGCCATTTTATTTAAAGTT--------------------------------------------CCCT-------GTATTCTGTCTGATTTCAAATTAAACA--------TGTAATTTAGCAAAAATGA-ATAACCAAAGAAG---GCAGGTCATCCTGGATGCC---CT-TACCATGA-----GGAGGCCG----GGTGGGGACAATCTCGCCAGCGAGCTCCATTCCAGGAGCTGCTGC----TGCATCCTTCCCATAAACATCCCTGacactcct---gagttgtcacta---ttgtcatttt---cattttagaa---------------attagtag---acagat-----------------gctttgagacaggaagtgaacta i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56242325 344 + 122678785 TTCATTCCCAAGTTTTAATCATTGTATTTAAAGTGGCA--ATAT--------CCACTTCTCACCCCAATGCTCCTGAGTCCCT-------GTATCCTGGCTTGTACTGCATAAAA---------CTACAACTT---AAGAGTGATGTAGCCAG-------------CTATTCCTGACACTGCAATAACCTGCAA-----GAAAGCTAAGTCTATTAAGA-CTTCTGACTCGAAAGCACCATACC--CAGATGTT-TGTGatacattatttctataaatatgcatgccattcctatgagggagacactatgttta----ttt---ccctttagaaaaatgagtgggaaatatcagaaagggagacagaacatgaaagactcctaactctgggaaacgaacta----g i canFam3.chr1 C 0 I 184 s dasNov3.JH569188 674499 331 + 760995 CTCATTCTCAAGTCTTGATTATTTTATTTAAGATTGCAATATCTGAGCAACCCCCCACCCCACTTCAATGATCTTGATTCTCTTTGCCCATTACCCTGGTTTATTTTACACAGAACACCACAACTTA----------------A-GTCACTGAAGAAGAGAAAAGATAGTGAATAATACC---ATAAACTGCAA-----AGAAGTTGAGTCAATAAAGATCTTCTAACTAGAAAGTGCCAGAAC--CATATGgt-tttaatgcattatttctataaatagtcaaggtgatcttttgaggcagattcta---ttc----tttctcccttttcaag---------------atgagtga---a-aaag-----------------gctttgagaggagaaatg----a i dasNov3.JH569188 I 9804 C 0 a score=4632776.000000 s hg38.chr6_KB021644v2_alt 184011 435 + 185823 attgcccaagatcaaacagccagtaatgtcagggcagggattagaaAACT----TTA----ACAATTA--TAAAATTTCATGAAACATGAAAATAAGGAATA-CATCCCTTCAAAGCAGCTATGAGATGTATGTATTAGAGCAAAGGAG-CAGTGAAAGTT-ACTGCATATTTCTTGGCACTTAGTCCATGGATTGCTTT--CAGTGTTATGATTCCTCTGAGTCACAGAACC--TGA--CAATTGTGAGCAC--TG-----TTACTGCCCTAATTCCTGCAGCCTCAGCTGTGAA--ACTTTCAGTATTTTTC-TTTTGTTTGTTGAGCCAGT----TAT-------------------TAAA------------AAAATGAACTACAACAGCTAATTCTTTCTGTTTATCTAAATGCTTGT-CAAAATGCCTAAGCAGTGATTTGCCAGGTTTGGGAGTTATACGTGCTTATACA-TTTCAAATAAACTGTGGCAGC-GG--- s panTro5.chr6 173646973 435 + 175400573 attgcccaagatcaaacagccagtaatgtcagggcagggattagaaAAAT----TTA----ACAGTTA--TAAAATTTCATGAAACATGAAAATAAGGAATA-CATCCCTTCAAAGCAGCTATGAGATGTATGTATTAGAGCAAAGGAG-CAGTGAAAGTT-ACTGCATATTTCTTGGCACTTAGTCCATGGATTGCTTT--CAGTGTTATGATTCCTCTGAGTCACAGAACC--TGA--CAATTGTGAGCAT--TG-----TTACTGCCCTAATTCCTGCAGCCTCAGCTGTGAA--ACTTTCAGTATTTTTC-TTTTGTTTGTTGAGCCAGT----TAT-------------------TAAA------------AAAATGAACTACAACAGCTAATTCTTTCTGTTTATCTAAATGCTTGT-CAAAATGCCTAAGCAGTGATTTGCCAGGTTTGGGAGTTATACGTGCTTATACA-TTTTAAATAAACTGTGGCAGC-AG--- i panTro5.chr6 C 0 C 0 s panPan2.chr6 171872422 435 + 173848474 attgcccaagatcaaacagccagtaatgtcagggcagggattagaaAAAT----TTA----ACAGTTA--TAAAATTTCATGAAACATGAAAATAAGGAATA-CATCCCTTCAAAGCAGCTATGAGATGTATGTATTAGAGCAAAGGAG-CAGTGAAAGTT-ACTGCATATTTCTTGGCACTTAGTCCATGGATTGCTTT--CAGTGTTATGATTCCTCTGAGTCACAGAACC--TGA--CAATTGTGAGCAT--TG-----TTACTGCCATAATTCCTGCAGCCTCAGCTGTGAA--ACTTTCAGTATTTTTC-TTTTGTTTGTTGAGCCAGT----TAT-------------------TTAA------------AAAATGAACTACAACAGCTAATTCTTTCTGTTTATCTAAATGCTTGT-CAAAATGCCTAAGCAGTGATTTGCCAGGTTTGGGAGTTATACGTGCTTATACA-TTTTAAATAAACTGTGGCAGC-AG--- i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11558734 435 - 12463322 attgcccaagatcaaacagccagtaatgtcagggcagggattagaaAAAT----TTA----ACAATTA--TAAAATTTCATGAAACATGAAAATAAGGAATA-CATCCCTTCAAAGCAGCTATGAACTGTATGTATTAGAGCAAAGGAG-CAGTGAAAGTT-ACTGCATATTTCTTGGCACTTAGTCCACGGATTGCTTT--CAGTGTTATGATTCCTCTAAGTCACAGAACC--TGA--CAATTGTGAGCAT--TG-----TTACTGCCCTAATTCCTGCAGCCTCAGCTGTGAA--ACTTTCAGTATTTTTC-TTTTGTTTGTTGAGCCAGT----TAT-------------------TAAA------------AAAATGAACTACAACAGCTAATTCTTTCTGTTTATCTAAATGCTTGT-CAAAATGCCTAAGCAGTGATTTGCCAGGTTTGGGAGTTATACGTGCTTATACA-TTTTAAATAAACTGTGGCAGC-GG--- i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156389921 436 + 157873769 attgcccaagatcaaactgccagtaatgtcagggcagggattagaaAAAT----TTA----ACCATTA--TAAAATTTCATGAAACATGAAAATAAGGAATA-CATCCCTTCAAAGCAGCTATGAGCTGTATGTATTAGAGCCAAGGAG-CAGTGAAAGTT-ACTGCATATTTCTTGGCGCTTAGTCCACGGATTGCTTTCACAGTGTTAATATTCCTCTAAGTCACAGAACC--CGA--CAATTGTGAGCAT--TG-----TTACTGCCCTAATTCCTGCAGCCTCAGCTGTGAAACACTTTCAGTATTTTTC-TTTTGTTTGTTGAGCCAGT----TAT-------------------AAAA------------AAAATGAGCT---ACAGCTAATTCTTTCTGCTTATCTAAATGCTTGT-CAAAATGCCTAAGCAGTGATTTGCCAGGTTTGAGAGTTATGGGTGCTTATACA-TTTTAAATAAACTGTGGCAGC-GG--- i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170416546 456 + 172585720 attgcccaagatcaaacagccagtaacgtcagggcagggattagaaAAAT----TTA----ACAATTA--TAAAATTTCATGAAACATGAAAATAAGGAATA-CATCCTTTCGAAGCAGCTAGGAGCTGTATGTATTAGAGCAAAGGAG-CGGTGAAAGTT-ATTGCATATTTCTTGGTACTTAGTCCACGGATTGCTTTCACAGTGTTATTATTCCTGTAAGTCACAGGACC--TGA--CAGTTGTGAGCAT--TG-----TTACTGCCCTAATTCCTGCAGCCTCAGCTGTGAAACACTTTCAATATTTTTC-TTTTGTTTGTTGAGCCAGT----TAT--TTaaaaaaaaaaaaa-aaaaa------------aaaaagaaCTACCACAGCTAATTCTTTCTGTTTATCTAAATGCTTGT-CAAAATGCCTAAGCAGTGATTTGCCGGGTTTGGGAGTTATGTGTGCATATACA-TTTTAAATAAACTGTGGCAACAGG--- i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169159829 456 - 170955103 attgcccaagatcaaacagccagtaacgtcagggcagggattagaaAAAT----TTA----ACAATTA--TAAAATTTCATGAAACATGAAAATAAGGAATA-CATCCTTTCAAAGCAGCTAGGAGCTGTATGTATTAGAGCAAAGGAG-CGGTGAAAGTT-ATTGCATATTTCTTGGTACTTAGTCCACGGATTGCTTTCACAGTGTTATTATTCCTGTAAGTCACAGGACC--TGA--CAGTTGTGAGCAT--TG-----TTACTGCCCTAATTCCTGCAGCCTCAGCTGTGAAACACTTTCAATATTTTTC-TTTTGTTTGTTGAGCCAGT----TAT--aaaaaaaaaaaaaaa-aaaaa------------aaaaaGAACTACCACAGCTAATTCTTTCTGTTTATCTAAATGCTTGT-CAAAATGCCTAAGCAGTGATTTGCCGGGTTTGGGAGTTATGTGTGCATATACA-TTTTAAATAAACTGTGGCAACAGG--- i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8445719 449 + 10161646 attgcccaagttcaaacagccagtaacgtcagggcagggattagaaAAAT----TTA----ACAATTA--TAAAATTTCATGAAACATAAAAATAAGGAATA-CATCCTTTCAAAGCAGCTAGGAGCTGTATGTATTAGAGCAAAGGAG-CGGTGAAAGTT-ATTGCATATTTCTTGGTACTTAGTCCACGGATTGCTTTCACAGTGTTATTATTCCTGTAAGTCACAGAACC--TGA--CAGTTGTGAGCAT--TG-----TTACTGCCCTAATTCCTGCAGCCTCAGCTGTGAAACACTTTCAATATTTTTC-TTTTGTTTGTTGAGCCAGT----TAT----------aaaaaaa-aaaaa------------aaaaagaaCTACCACAGCTAATTCTTTCTGTTTATCTAAATGCTTGT-CAAAATGCCTAAGCAGTGATTTGCCGGGTTTGGGAGTTATGCGTGCATATACATTTTTAAATAAACTGTGGCAACAGG--- i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1476904 452 + 3144229 attgcccaagatcaaacagccagtaacgtcagggcagggattagaaAAAT----TTA----ACAATTA--TAAAATTTCATGAAACATGAAAATAAGGACTA-CATCCCTTCAAAGCAGCTAGGAGCTATATGTATTAGAGCAAAGGAG-CGGTGAAAGTT-ACTGCATATTTCTTGGTACTTAGTCCACGGATCGCTTTCACAGTGTTATTATTCCTGTAAGTCACAGGACC--TGA--CAGTTGTGAGCGT--TG-----TTACTGCCCTAATTCCTGCAGCCTCAGCTGTGAAACACttttaatatttttt-tttttttttttGGGCCATT----TTT------Taaaaaaaaaa-aaaaa------------aaaaagaaCTACCACAGCTAATTCTTTCTGTTTATCTAAATGCTTGT-CAAAATGCCTAAGCAGTGATTTGCCGGGTTTGGGAGTTATGCGTGCATATACA-TTTTAAATAAACTGTGGCAACAGG--- i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96761242 466 + 98384682 attgcccaagatcaaacagccagtaacgtcagagcagggattagaaAAAT----TTA----ACAATTA--TAAAATTTCATGAAACATGCAAATAAGGAATA-CATCCCTTCAAAGCAGCTAGGAGCTGTATGTATTAGAGCAAAGGAG-CAGTGAAAGTT-ATTGCATATTTCTTGTTACTTAGTCCACGGATTGCTTTCACAGTGTTATTATTCCTGTAAGTCACCGAACC--TGA--CAGTTGTGAGCAT--TG-----TTACTGCCCTAATTCCTGCAGCTTCAGCTGTGAAACACTTTCAGTATTTTTC-TTTTGTTTGTTGAGACAGT----Taa--aaaaaaaaaaaaaaa-aaaaaaaaaaaaaaaaaaaaaagaaCTACCACAGCTAATTCTTTCTGTTTATCTAAATGCTTGT-CAAAATGCCTAAGCAGTGATTTGCCGGGTTTGGGAGTTATGTGTGCATATACA-TTTTAAATAAAC--TGGCAACAGG--- i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8328770 450 - 10857215 attgcccaagatcaaacagccagtaacgtcagggcagggattagaaAAAT----TTA----ACAATTA--TAAAATTTCATGAAACATGAAAATAAGGAATA-CATCCCTTCAAAGCAGCTAGGAGCTGTATGTATTAGAGCAAAGGAG-CAGTGAAAGTT-TCTGCATATTTCTTGGTACTTAGTCCACGGATCGCTTTCACAGTGTTATTATTCCTGTAAGTCACAGAACC--TGA--CAGTTGTGAGCGT--TG-----TTACTGCCCTAATTCCTGCAGCCTCAGCTGTGAAACACTTTCAATATTTTTC-TTTTGTTTGTTGAGCCAGT----TAT--ATTTTAAAAAAGAAA-AAAAA------------------AGCTACCACAGCTAATTCTTTCTGTTTATCTAAATGCTTGT-CAAAATGCCTAAGCAGTGATTTGCCGGGTTTGGGAGTTATGCGTGCATATACA-TTTTAAATAAACTGTGGCAACAGG--- i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15683480 458 - 23502949 attgcccaagatcaaacagccagtaacgtcagggcagggattagaaAAAT----TTA----ACAATGA--TACAATTTCATGAAACATGAAAATAAGGAATA-CATCCCTTCAAAGCAGCCATGAGCTGTACATATCAGAGCAAAGGAG-CAGTGAAAGTT-ATTGCGTATTTCTTGGTACTTAGTCCACGGATTGCTCTCACAGTGTTATTATTCCTGTAAGTCACCGAACC--TGA--CAGTTGTGAGCGT--TG-----TTACTGCCCTAATTCCTGCAGCCTCAGCTGTGAAACACTTTCAATATTTTTC-TTTTGTTTGTTGAGACAGT----TATTaaaaaaaaaaagaaaa-agaaa------------aaaaagaaCTACAACAGCTAATTCTTTCTGTTTATCTAAATGCTTGT-CAAAATGCCTAAGCAGTGATTTGCCGGGTTTGGGAGTTCTGCGTGCGTATACA-TTTTAAATAAACTGTGGCAACAGG--- i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169974616 438 + 171630274 attgcccaaggtcacacagccagtaatgtcagggcagggattagaaAAAT----TTG----ACAATTA--TAAAATTTCATGAAATGTAAAAAAAAGGCGTG-CATCCCTTCGAAGCAGCTACGAGCCGTATATATTAGTGCGAAGGCG-CAGAGAAGGTG-ACTGCCTATTCCTTGGCATTTCGTCCACAGATTGCTTTCACAGAGTC---CTTCCTCCAAGTCGCAGAACC--TGA--CAGTTGTGAGCAC--CT-----TTGCAGCCCTAATTACTGCAGCCTCAGTGGTGAAACACTTTCAGTGTTTTAC-TTTTGTTTGCTGAGCCGGT----TAT----------------A-TGAAA------------AAAATGAACGATAACAGCCAATTCTTTCTGTTTATCTGAATGCTTGT-CAAAATGCCTCAGCAGTGATTTGCAGGGTTTGGGAGTCCTGTGCGCTCGTGCA-TCCTAAATAAACAGAGGCTGC-GC--- i calJac3.chr4 C 0 I 6 s saiBol1.JH378287 1368803 439 - 2905041 attgcccaaggtcacacagccagtaatgtcagggcagggattagaaAAAT----TTG----ACAATTA--TAAAATTTCCTGAAATGTAAAAATAAGGCATG-CATCCCTTCAAAGCAGCTATGAGCTGTATATATTAGTGCAAAGGAG-CAGGGAAAGTT-ACT-CCTATTCCTTGGTATTTAGTCCACAGATTGCTTT--CAGAGTC---ATTCTTCTAAGTCACAGAACC--TGA--CGATTGTGAGCAC--TG-----TTGCAGCCCTAATTCCTGCAGCCTCAGTGGTGAAACATTTTCAGTATTTTTC-TTTTGTTTGCTGAGCTGGTTATATAT----------------A-TATAA------------AAAATGAACTATAACAGCCAAGTCTTTCTGTTTATCTGAATGCTTGT-CAAAATGCCTCCACAGTGATTTGCAGGGTCTGGGAGTCCTGCGTGCTCATACA-TCCTACATAAACAGTGGCTGC-GG--- i saiBol1.JH378287 C 0 I 18 s cebCap1.NW_016107695v1 1339164 438 - 2164891 attgcccaaggtcacacagccagtaatgtcagggcagggattagaaAAAT----TTG----ACAATTA--TAAAATTTCATGAAATGTAAAAATAAGGCATG-CATCCCTTCAAAGCAGCTATGAGTTGTATGTATTAGTGCAAAGGAA-CAGAGGAAGTT-ACT-CCTAATCCTTGGCATTTAGTCCACAGATTGCTTTCATAGAGTC---ATTCCTCTAAGTTGCAGAACC--TAA--CAATTGTGAGCAC--TG-----TTGCAGCCCTAATTCCTGCAGCCTCAGTGGTGAAACATTTTCAGTATTTTTC-TTTTGTTTGCTGAGCCGGT----TAT----------------ATTTTAA------------AAAATGAACTATAACAGCCAATTCTTTCTGTTTATCTGAATGTTCGT-CAAAATGCCTTAGCAGTGATTTGCAGGGTCTGGGAGTCCTGCGTGCTCGAACG-TCCTAAATAAACAGTGGCTGC-GG--- i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1582845 436 - 1813869 attgcccaagttcacacagccagcaatgtcagggcagggattagaaAAAT----TTG----ACAATTA--TAAAATTTCATGAAACGTAAAAATAAGGCATG-CATCCCTTCAAAGCAGCTGTGAGCTGTATTT-TTAGTGCAAAGGAG-CAGAGAAAGTT-ACTGCCTACTCCTTGGCATTTAGTCCACAGATTGCTTTCACAGAGTC---ATTCCTCTAAGTCACAGGACC--TGA--C-ATTGTGAGCGC--TG-----CTGCAGCCCTAATTCCTGCAGCCTCAGTGGTGAAACACTGTCCATATTTTTC-TTTTGTTTGCGGAGCCGGT----TAT----------------A-TTTAA------------AAAATGAGCTGTAACAGCCAATTCTTTCTGTTTATCTGAATGCTTGT-CAAACTGCCTCAGCAGTGATTTGCAGGGTTTGGGAGTCCTGCGTGCTCATGCG-TCCTAAGTAAACAGTGGCTGC-GG--- i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 11003814 427 - 12073884 attgcccaaggcaaaacagccagcagtgtcagggcAATTGTTAAAAAATC----TTGCTTCACAACTA--TAAAACTTTATGGAACATAAAACTACAGCACATCATCACTTCAACACGGTTAAACATTTTATACTTTAGGGCTGAGGAGAAAGTAAAAACC-ACTGCACACTCCTCGGCACTGCGTGCACA-ATTGCTTT------------------------CACAAAAAC--TAA--CAGCTGTGAGCAC--TG-----TCGTGGCACTAATTCCTGCAGCCTTAGCTGCAAAATGCTTTCAGTATTTTTC-TTTTGTTTGCCTGGCCAAT----TCT----------GAAAAAA-AAAAA------------AAAAAGAATTACAACAGTTAATTCTTTCTGCGTGTTTAAACCCTTGT-CTAAATGCCTAAACAGTGATTTGTGGAGCTTCGGAATTAGGCACAC-TATACA-TTCTAAATAAACTGTGGCCAT-GG--- i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56242853 433 + 122678785 attgcccagagtcaagtagcccacagtgtcagggcagggactggaaaaac----tca----gtgct----tgacattccaTGAGACAT-AAACTACAGTGTGTCATCCCTTCGAAGCAGCTATAAGTTCCATGGACTGGAGCAGGGGAG-GGGACAAAATTGAACACATATTCCTTGGCGCT-GGTCCCCAGCTCTTTT-----GAGCTCCCACCTCCCTGAGTCACGAGAGC--CGAGGCCAGGGGGAACGC--TGTGTTATCACTGCCCTCATCACGACAGCTTTGGCCGCCGA-CGCTTGCAGTGTTTTTC-TTTTGTTTGCTGAGCCAGT----TAT--------------------GAA------------AAAATGAGCTCAAACAGTGCATTCTCTCTGCTTATCTAAACTCTTGT-CCAAATGCTTCAGC-GTGATTTGCGAGGTCCAGGAG----GCCCACTCACGAG-TCCTCGGCAGGCTGTGGCCCCCGG--- i canFam3.chr1 I 184 I 1 s dasNov3.JH569188 674830 438 + 760995 aatgtccaaggttaataagctagtaatgtcaaggcaagaactctaaAAATTGCCTTC----ACTACTACTTTAAATTTCATAAAGTGTAAAACTAAAGTATGTCATCACTTCAATA----TATAAGCTTTATATATTGGAGCTCAGCAG----------GT-ACGACATAGTCACTGGAAGTTAGTCCATTAATTGCTTTCATGGTATT---CTTTCCCTAAATCACAAAAATGGTGA--CAATTTTGAGCATCATT-----TTCTTACCATAATTACTGCAGTCCTAGCTGCAGAGCACTTTGAATACTATTCTTTTTGCTTAGCAAGCCAAT----TAG--------------------GAA------------AATATGAGCTACAACAGTTATTTTTTTCTGCTTATCTAAACCTCTGTACTAAATGTCTAAGCAGTGATTTGTGAGGTATTAGAATTATGCACGCTTAAAAA-TTCTAAGTCAACAGTGGCAGT-AGCAG i dasNov3.JH569188 C 0 C 0 a score=13073.000000 s hg38.chr6_KB021644v2_alt 184446 1 + 185823 C s panTro5.chr6 173647408 1 + 175400573 C i panTro5.chr6 C 0 C 0 s panPan2.chr6 171872857 1 + 173848474 C i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11559169 1 - 12463322 C i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156390357 1 + 157873769 C i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170417002 1 + 172585720 C i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169160285 1 - 170955103 C i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8446168 1 + 10161646 C i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1477356 1 + 3144229 C i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96761708 1 + 98384682 C i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8329220 1 - 10857215 C i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15683938 1 - 23502949 C i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169975060 1 + 171630274 T i calJac3.chr4 I 6 C 0 s cebCap1.NW_016107695v1 1339602 1 - 2164891 C i cebCap1.NW_016107695v1 C 0 I 25 s aotNan1.NW_018494782v1 1583281 1 - 1813869 C i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 11004241 1 - 12073884 C i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56243287 1 + 122678785 C i canFam3.chr1 I 1 C 0 s dasNov3.JH569188 675268 1 + 760995 C i dasNov3.JH569188 C 0 C 0 e saiBol1.JH378287 1369242 18 - 2905041 I a score=36343.000000 s hg38.chr6_KB021644v2_alt 184447 6 + 185823 CTTAGC s panTro5.chr6 173647409 6 + 175400573 CTTAGC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171872858 6 + 173848474 CTTAGC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11559170 6 - 12463322 CTTAGC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156390358 6 + 157873769 CTTAGC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170417003 6 + 172585720 CTTAGC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169160286 6 - 170955103 CTTAGC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8446169 6 + 10161646 CTTAGC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1477357 6 + 3144229 CTTAGC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96761709 6 + 98384682 CTCAGC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8329221 6 - 10857215 CTTAGC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15683939 6 - 23502949 CTTAGC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169975061 6 + 171630274 CTGAGC i calJac3.chr4 C 0 C 0 s aotNan1.NW_018494782v1 1583282 4 - 1813869 --GGGC i aotNan1.NW_018494782v1 C 0 I 17 s otoGar3.GL873575 11004242 4 - 12073884 --CAGC i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56243288 5 + 122678785 CGGGG- i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 675269 6 + 760995 GATGGC i dasNov3.JH569188 C 0 C 0 e saiBol1.JH378287 1369242 18 - 2905041 I e cebCap1.NW_016107695v1 1339603 25 - 2164891 I a score=194772.000000 s hg38.chr6_KB021644v2_alt 184453 32 + 185823 TTTTGTGGCTCCAGCAGGCGTAAGTGAGTGTG s panTro5.chr6 173647415 32 + 175400573 TTTTGTGGCTCCAGCAGGCATAAGTGAGTGTG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171872864 32 + 173848474 TTTTGTGGCTCCAGCAGGCATAAGTGAGTGTG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11559176 32 - 12463322 TTTTGTGGCTCCAGCAGGCGTAAGTGAGTGTG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156390364 32 + 157873769 TTTTGTGGCTCCAGCAGGCGTAAGTGAGTGTG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170417009 32 + 172585720 TTTTGTGGCTCCAGCAGGCGTGAGTGAGTGTG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169160292 32 - 170955103 TTTTGTGGCTCCAGCAGGCGTGAGTGAGTGTG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8446175 32 + 10161646 TTTTGTGGCTCCAGCAGGCGTGAGTGAGTGTG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1477363 32 + 3144229 TTTTGTGGCTCCAGCAGGCGTGAGTGAGTGTG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96761715 32 + 98384682 TTTTGTGGCTCCCACAGGCGTGAGTGAGTGTG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8329227 32 - 10857215 TTTTGTGGCTCCAGCAGGCGTGAGTGAGTGTG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15683945 32 - 23502949 TTGTGTGGCTCCAGCAGGCGTGAGTGAGTGTG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169975067 7 + 171630274 --------CTCTCTC----------------- i calJac3.chr4 C 0 C 0 s otoGar3.GL873575 11004246 29 - 12073884 --ATGTGGCCGCA-CGGGCTGGGGTGTGTGTG i otoGar3.GL873575 C 0 I 8 s canFam3.chr1 56243293 19 + 122678785 -------------GCAGGGGTGCCTGCGAACG i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 675275 32 + 760995 CGATGTGGACACAGCAGGCCTAAGTATCTGTG i dasNov3.JH569188 C 0 C 0 e saiBol1.JH378287 1369242 18 - 2905041 I e aotNan1.NW_018494782v1 1583286 17 - 1813869 I e cebCap1.NW_016107695v1 1339603 25 - 2164891 I a score=40290.000000 s hg38.chr6_KB021644v2_alt 184485 6 + 185823 --------------TGTGCT-- s panTro5.chr6 173647447 6 + 175400573 --------------TGTGCT-- i panTro5.chr6 C 0 C 0 s panPan2.chr6 171872896 6 + 173848474 --------------TGTGCT-- i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11559208 6 - 12463322 --------------TGTGCT-- i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156390396 6 + 157873769 --------------TGTGCT-- i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170417041 6 + 172585720 --------------TGTGCT-- i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169160324 6 - 170955103 --------------TGTGCT-- i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8446207 6 + 10161646 --------------TGTGCT-- i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1477395 6 + 3144229 --------------TGTGCT-- i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96761747 6 + 98384682 --------------TGTGCT-- i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8329259 6 - 10857215 --------------TGTGCT-- i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15683977 6 - 23502949 --------------TGTGCT-- i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169975074 6 + 171630274 --------------TGTGCT-- i calJac3.chr4 C 0 I 1 s saiBol1.JH378287 1369260 6 - 2905041 --------------TGCCTT-- i saiBol1.JH378287 I 18 I 1 s otoGar3.GL873575 11004283 6 - 12073884 --------------TGTGCA-- i otoGar3.GL873575 I 8 I 1 s canFam3.chr1 56243312 6 + 122678785 --------------CTTGTT-- i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 675307 22 + 760995 TGTTTCTATAGGCATAAGCTCT i dasNov3.JH569188 C 0 C 0 e aotNan1.NW_018494782v1 1583286 17 - 1813869 I e cebCap1.NW_016107695v1 1339603 25 - 2164891 I a score=278304.000000 s hg38.chr6_KB021644v2_alt 184491 27 + 185823 TTCTCTCTCCGCAT----CTGCTGCTTGACA s panTro5.chr6 173647453 27 + 175400573 TTCTCTCTCCGCAT----CTGCTGCTTGACA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171872902 27 + 173848474 TTCTCTCTCCGCAT----CTGCTGCTTGACA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11559214 27 - 12463322 TTCTCTCTCCGCAT----CTGCTGCTTGACA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156390402 27 + 157873769 TTCTCTCTCTGCAT----CTGCTGCTTGACA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170417047 27 + 172585720 CTCTCTCTCCGCAT----CTGCTGCTTGACA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169160330 27 - 170955103 CTCTCTCTCCGCAT----CTGCTGCTTGACA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8446213 27 + 10161646 CTCTCTCTCTGCAT----CTGCTGCCTGACA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1477401 27 + 3144229 CTCTCTCTCCGCAT----CTGCTGCTTGACA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96761753 27 + 98384682 TCCTCTCTCCGCAT----CTGCTGCTTGACA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8329265 27 - 10857215 CTCTCTCTCCGCAT----CTGCTGCTTGACA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15683983 27 - 23502949 TTCTCTCTCCGCAT----CTGCTGCTTGACA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169975081 27 + 171630274 TGCCTCCTCCGCAT----CTGCGGCCTGACG i calJac3.chr4 I 1 C 0 s saiBol1.JH378287 1369267 27 - 2905041 TGCCTCCTCCGCAT----CTGCTGCCTGACG i saiBol1.JH378287 I 1 C 0 s cebCap1.NW_016107695v1 1339628 27 - 2164891 TGCCTCCTCCGCAT----CTGCTGCCTGACG i cebCap1.NW_016107695v1 I 25 C 0 s otoGar3.GL873575 11004290 31 - 12073884 TTCCTTCTCCTCCTCTGCCTGCCGCCGGACA i otoGar3.GL873575 I 1 C 0 s canFam3.chr1 56243318 25 + 122678785 --TTCCTCCTGCAG----CTGCCGCTGGACA i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 675329 27 + 760995 TTTTACTTCTGCAT----CAGCTACTTGACA i dasNov3.JH569188 C 0 C 0 e aotNan1.NW_018494782v1 1583286 17 - 1813869 I a score=1718628.000000 s hg38.chr6_KB021644v2_alt 184518 127 + 185823 TCTTTAATTTATTATTCCTGTTATATAACTTTGTTTTGGCGCTTGAACTTCCATTCCCATGACTTTATGTTGAAAAACAG-TTTTAAATCTAGGATTTGCATTTCACCACAGTGATAGAGCCTGGTTA s panTro5.chr6 173647480 127 + 175400573 TCTTTAATTTATTATTCCTGTTATATAACTTTGTTTTGGCGCTTGAACTTCCATTCCCATGACTTTATGTTGAAAAACAG-TTTTAAATCTAGGATTTGCATTTCACCACAGTGATAGAGCCTGGTTA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171872929 127 + 173848474 TCTTTAATTTATTATTCCTGTTATATAACTTTGTTTTGGCGCTTGAACTTCCATTCCCATGACTTTATGTTGAAAAACAG-TTTTAAATCTAGGATTTGCATTTCACCACAGTGATAGAGCCTGGTTA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11559241 128 - 12463322 TCTTTAATTTATTATTCCTGTTATATAACTTTGTTTTGGCACTTGAACTTCCATTCCCATGACTTTATGTTGAAAAACAGTTTTTAAATCTGGGATTTGCATTTCACCACAGTGATAGAGCCTGGTTA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156390429 127 + 157873769 TCTTTAATTTATTATTCCTGTTATATAACTTTGTTTTGGCGCTTGAACTTCCATTCCCATGACTTTATGTTGAAAAACAG-TTTTAAATCTAGGATTTGCATTTCACCACAGTGATAGACACTGGTTA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170417074 127 + 172585720 TCTTTAATTTATTATTCCTGTTATATAACTTTGTTTTGGTGTTTGAACTTCCATTCCCATGACTTTATGTTGAAAAACAG-TTTTAAATCTAGGATTTGCATTTCACCACAGTGATAGAGCCTGGTTA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169160357 127 - 170955103 TCTTTAATTTATTATTCCTGTTATATAACTTTGTTTTGGTGTTTGAACTTCCATTCCCATGACTTTATGTTGAAAAACAG-TTTTAAATCTAGGATTTGCATTTCACCACAGTGATAGAGCCTGGTTA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8446240 127 + 10161646 TCTTTAATTTATTATTCCTGTTATATAACTTTGTTTTGGTGTTTGAACTTCCATTCCCATGACTTTAGGTTGAAAAACAG-TTTTAAATCTAGGATTTGCATTTCACCACAGTGATAGAGCCTGGTTA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1477428 127 + 3144229 TCTTTAATTTATTATTCCTGTTATATAACTTTGTTTTGGTGTTTGAACTTCCATTCCCATGACTTTATGTTGAAAAACAG-TTTTAAATCTAGGATTTGCATTTCACCACAGTGATAGAGCCTGGTTA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96761780 127 + 98384682 TCTTTAATTTATTATTCCTGTTATATAACTTTGTTTTGGTGTTTGAACTTCCATTCCCATGACTTTATGTTGAAAAACAG-TTTTAAATCTTGGATTTGCATTTCACCACAGTGATAGAGCCTGGTTA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8329292 126 - 10857215 TCTTTAATTTATTATT-CTGTTATATAACTTTGTTTTGGTGTTTGAACTTCCATTCCCATGACTTTATGTTGAAAAACAG-TTTTAAATCTAGGATTTGCATTTCACCACAGTGATAGAGCCTGGTTA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15684010 127 - 23502949 TCTTTAATTTATTATTCCTGTTATATAACTTTGTTTTGGTGTTTGAACTTCCATTCCCATGACTTTATGTTGAAAAACAG-TTTTAAATCTAGGATTTGCATTTCACCACAGTGATAGAGCTTGGTTA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169975108 127 + 171630274 TCTTCGATTTATCACTCCTGTTAGATAACTTTGTTTTGGTGCTTGGACTTCCCTTCCCATGACTTCATGCTGAAAGGCAT-TTTTAAATCTAGGATTTGCATTGTGCCGTAGTGACAGAGCCCGGTTA i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1369294 127 - 2905041 TCTTCAACTTATTATTGCTGTTATATAACTTTGTTTTGCTGCTTGGACTTCCATTCCCATGACTTCATGCTGAAAAACAT-TTTTAAATCTAGGATTTGCATTTTACTGTAGTGATAGAGCCTGGCTA i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1339655 127 - 2164891 TCTTCAATTTATTATTCCTGTTATATAACTTTGTTTTGGCGCTTGGACTTTCATTCCCATGACCTCATGCTGAAAAACCT-TTTTAAATCTAGGATTTGCACTTTACCCCAGTGATAGAGCCTGGTTA i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1583303 127 - 1813869 TCTTCGATTTATCATTCCTGTTATGTAACTTTGTTTTGGTGCTTGGACTTCCATTCCCATGACTTCACACTGAAAAACAT-TTTGAAATCTAGGATTTGCATTTTACCGTAGTGATCGAGCCTGGTTA i aotNan1.NW_018494782v1 I 17 C 0 s otoGar3.GL873575 11004321 124 - 12073884 TCTTTAATTTATTACTCCTGTTACATAACTTTGTTTTTGTGCTTGGACTTCCATTCCCATGACTTTATGTTGAAAAACAC-TTTTAAAT-TAGGATTTGCGTTTCACAATAATGATAGG--TTGGTTA i otoGar3.GL873575 C 0 C 0 s canFam3.chr1 56243343 127 + 122678785 TCTTTAATTTATTATTCCTCTTATATAACTTTGTTTTGGTGCTTGAACTTCCATTCCCATGACTTTATGTTGAAAAACAT-TCTAAAATCGAGGCTTTGCATTTCACAACAGTGGTGGAGCTCGGTTA i canFam3.chr1 C 0 I 258 s dasNov3.JH569188 675356 127 + 760995 TCTTTAATTTGTTATTTCTGTTATATAATTTTGTTTTGGTACTTGCTCTTCCATTCTCATGATTTTAAGTTGAAAAACAT-TTTTATTTCTAGGATTGGCATTTCACAATAGTGATAGAACTTGGTTA i dasNov3.JH569188 C 0 C 0 a score=283888.000000 s hg38.chr6_KB021644v2_alt 184645 25 + 185823 TTTATTGTTATTTGCAATATGGCAT s panTro5.chr6 173647607 25 + 175400573 TTTATTGTTATTTGCAATGTGGCAT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171873056 25 + 173848474 TTTATTGTTATTTGCAATGTGGCAT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11559369 25 - 12463322 TTTATTGTTATTTGCAATATGGCAT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156390556 25 + 157873769 TTTATTGTTATTTGCAATATGGCAT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170417201 25 + 172585720 TTTTTTGTTATTTGCAATATGGCAT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169160484 25 - 170955103 TTTTTTGTTATTTGCAATATGGCAT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8446367 25 + 10161646 TTTTTTGTTATTTGCAATATGGCAT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1477555 25 + 3144229 TTTTTTGTTGTTTGCAATATGGCAT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96761907 25 + 98384682 TTTTTTGTTATTTGCAATATGGCAT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8329418 25 - 10857215 TTTTTTGTTATTTGCAATATGGCAT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15684137 25 - 23502949 TTTTTTGTTATTTGCAATATGGCAT i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169975235 22 + 171630274 TTTA---TTATTTGCAATACGGCAT i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1369421 25 - 2905041 TTTATTGTTATTTGCAATATGGCAT i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1339782 22 - 2164891 TTTG---TTATTTGCAATATGGCAT i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1583430 25 - 1813869 TTTATTGTTATTTGCAATATGGCAT i aotNan1.NW_018494782v1 C 0 I 9 s otoGar3.GL873575 11004445 25 - 12073884 TTTATTGGTGTTTGCAGTATGGCCT i otoGar3.GL873575 C 0 C 0 s dasNov3.JH569188 675483 25 + 760995 TTTATTGCTATTTGTAGTGTGGCTT i dasNov3.JH569188 C 0 C 0 e canFam3.chr1 56243470 258 + 122678785 I a score=5146.000000 s hg38.chr6_KB021644v2_alt 184670 1 + 185823 A s panTro5.chr6 173647632 1 + 175400573 A i panTro5.chr6 C 0 C 0 s panPan2.chr6 171873081 1 + 173848474 A i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11559394 1 - 12463322 A i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156390581 1 + 157873769 A i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170417226 1 + 172585720 A i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169160509 1 - 170955103 A i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8446392 1 + 10161646 A i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1477580 1 + 3144229 A i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96761932 1 + 98384682 A i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8329443 1 - 10857215 A i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15684162 1 - 23502949 A i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169975257 1 + 171630274 G i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1369446 1 - 2905041 G i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1339804 1 - 2164891 G i cebCap1.NW_016107695v1 C 0 I 8 s otoGar3.GL873575 11004470 1 - 12073884 G i otoGar3.GL873575 C 0 C 0 s dasNov3.JH569188 675508 1 + 760995 G i dasNov3.JH569188 C 0 C 0 e aotNan1.NW_018494782v1 1583455 9 - 1813869 I e canFam3.chr1 56243470 258 + 122678785 I a score=44587.000000 s hg38.chr6_KB021644v2_alt 184671 9 + 185823 TAATATGGC- s panTro5.chr6 173647633 9 + 175400573 TAATATGGC- i panTro5.chr6 C 0 C 0 s panPan2.chr6 171873082 9 + 173848474 TAATATGGC- i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11559395 9 - 12463322 TAATATGGC- i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156390582 9 + 157873769 TAATATGGC- i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170417227 9 + 172585720 TAATATGGC- i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169160510 9 - 170955103 TAATATGGC- i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8446393 9 + 10161646 TAATATGGC- i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1477581 9 + 3144229 TAATACGGC- i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96761933 9 + 98384682 TAATATGGC- i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8329444 9 - 10857215 TAATACGGC- i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15684163 9 - 23502949 TAATATGGC- i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169975258 7 + 171630274 --GTATCCT- i calJac3.chr4 C 0 I 2 s saiBol1.JH378287 1369447 7 - 2905041 --GTATCCT- i saiBol1.JH378287 C 0 I 2 s otoGar3.GL873575 11004471 7 - 12073884 --GTGTCCC- i otoGar3.GL873575 C 0 I 1 s dasNov3.JH569188 675509 8 + 760995 --GTATCCTG i dasNov3.JH569188 C 0 C 0 e aotNan1.NW_018494782v1 1583455 9 - 1813869 I e cebCap1.NW_016107695v1 1339805 8 - 2164891 I e canFam3.chr1 56243470 258 + 122678785 I a score=1416210.000000 s hg38.chr6_KB021644v2_alt 184680 143 + 185823 AATAATCTATGTCTAGTCAACAGTCAGGAATAACAAAAGATTCA-TGGCATATTAAAACAAGATTGATGTCCCTCTGCCGAGGGAGGTTATTGCTGGCCTAAGC---A---CAAATGGCCAGAGTGAGTTGCACAGG--CTGTGCA--GCCCTG s panTro5.chr6 173647642 143 + 175400573 AATAATCTATGTCTAGTCAACAGTCAGGAATAACAAAAGATTTA-TGGCATATTAAAACAAAATTCATGTCCCTCTGCTGAGGGAGGTTATTGCTGGCCTAAGC---A---CAAATGGCCAGAGTGAGTTGCACAGG--CTGTGCA--GCCCTG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171873091 143 + 173848474 AATAATCTATGTCTAGTCAACAGTCAGGAATAACAAAAGATTTA-TGGCATATTAAAACAAAATTGATGTCCCTCTGCTGAGGGAGGTTATTGCTGGCCTAAGC---A---CAAATGGCCAGAGTGAGTTGCACAGG--CTGTGCA--GCCCTG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11559404 143 - 12463322 AATAATCTATGTCTAGTCACCAGTCAGGAATAACAAAAGATTTA-TGGCATATTAAAACAAAATTAACGTCCCTCTGCTGAGGGAGGTTATTGCTGGCCTAAGC---A---CAAATGGTCAGAGTGAGTTGCACAGG--CTGTGCA--GCCCTG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156390591 143 + 157873769 AAGAATCCATGTCTAGTCACCAGTCAGGAATAACAAAAGATTTA-TGGCATATTAAAACAAAATTGATGTCTCTCTGCTGGGGGAGGTTATTGCTGGCCTAAGC---A---AAAATGGCCAGAGTGAGTTTCACAGG--CTGTGCA--GCCCTG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170417236 143 + 172585720 AATAATCTATGTCTAGTCACCAGTCAGGGATAACAAGAGATTTA-TGGCATATTAAAACAAAATTGATGTTCCTCTGATGAGGGAGGTTATTGCTGGCCTAAGC---A---AAAATGGCCAGAGTGAATTTCACAGG--CTGTGCA--GCCCTG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169160519 143 - 170955103 AATAATCTATGTCTAGTCACCAGTCAGGGATAACAAGAGATTTA-TGGCATATTAAAACAAAATTGATGTTCCTCTGATGAGGGAGGTTATTCCTGGCCTAAGC---A---AAAATGGTCAGAGTGAATTTCACAGG--CTGTGCA--GCCCTG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8446402 143 + 10161646 AATAATCTATGTCTAGTCACCAGTCAGGGATAACAAGAGATTTA-TGGCATATTAAAACAAAATTGATGTTCCTCTGATGAGGGAGGTTATTGCTGGCCTAAGC---A---AAAATGGCCAGAGTGAATTTCACAGG--CTGTGCA--GCCCTG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1477590 146 + 3144229 AATAATCTATGTCTAGTCACCAGCCAGGGATAACAAGAGATTCA-TGGCATATTAAAACAAAATTCATGTTCCTCTGATGAGGGAGGTTATTGCTGGCCTAAGCAAAA---AAAATGGCCAGAGTGAATTTCACAGG--CTGTGCA--GCCCTG i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96761942 146 + 98384682 AATAATCTATGTCTAGTCACCAGTCAGGGATAACAAGAGATGTA-TGGCATATTAAAACAAAATGGATGTTCCTCTGATGAGGGAAGTTATTGCTGGCCTAAGC---AAAGAAAATGACCAGAGTGAATTTCACAGG--CTGTGCA--GCCCTG i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8329453 145 - 10857215 AATAATCTATGTCTAGTCACCAGCCAGGGATAACAAGAGATTTA-TGGCATATTAAAACAAAATTGATGTTCCTCTGATGAGGGAGGTTATTGCTGGCCTAAGC---AAA-AAAATGGCCAGAGTGAATTTCACAGG--CTGTGCA--GCCCTG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15684172 143 - 23502949 AATAGTCTATGTCTAGTCACCAGTCAGGGATAACAAAAGACTTA-TGGCATATTAAAACAAAATTGACGTTCCTCTGATGAGGGAGGTTATTGCTGGCCTAAGC---A---AAAATGGCCAGAGTGAATTTCACAGG--CTGTGCA--GCCCTG i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169975267 141 + 171630274 -ATAATCCATGTCCAGTCA-CGGTCAGAAATAACAAAGGATTTA-TCGCATTTTAAAACAAAATTCGTGTTTCTCTGCTGAGGGAGGCTACTGCTGGCCTGGGC---A---AAAATTGCCAGCGTGAGTTTCTCAGG--CTGGGCC--GCCCCG i calJac3.chr4 I 2 C 0 s saiBol1.JH378287 1369456 140 - 2905041 -ATAATTGATGTCTAGTCA-CGGTCAGGAATAACAGAGGATTTA-TGGCATATT-AAACAAAATTGGTGTTTCTCTGCCGAGGGAGGCTATTGTTGGCCTAAGC---A---AAAATTGCCAGTGTGAGTTTGGCAGG--CTGGGCC--GCCCTG i saiBol1.JH378287 I 2 C 0 s cebCap1.NW_016107695v1 1339813 141 - 2164891 AATAATCTATGTCTAGTCA-CGGTTAGGAATAACAAAGGATTTA-TGGCATATT-AAACAAAATTGGTGTTTCTCTGCTGAGGGAGGCTATTGCTGGCCTAAGC---A---AAAATTGCCAGCATGAGTTTCACAGG--CTGGGCC--GCCCTG i cebCap1.NW_016107695v1 I 8 C 0 s aotNan1.NW_018494782v1 1583464 142 - 1813869 AATAATCTACATCTAGTCA-CGGTCAGGAATAACAAAGGATTTA-TGGCATATTAAAACAAAATTGGTGTTTCTCTGCTGAGGGAGGCTATTGCTGGCCTAAGC---A---AAAATTGCCAGCGTGAGTTTCACAGG--CTGGGCA--GCCCTG i aotNan1.NW_018494782v1 I 9 C 0 s otoGar3.GL873575 11004479 109 - 12073884 AGTAATCTATGTCTAGTCACAAGGCTGGGGCGAGGGAGGGTCC-------------TACAGGACAGATGCTCCTCTCCTGGCAGAGGTCAT----------GGC---C-----------------GAGTTTCACATG--CTATGCACTGCCTTG i otoGar3.GL873575 I 1 I 1009 s dasNov3.JH569188 675517 146 + 760995 AATACTCTGTGTCTAATTGTAACTCTGAAATGAGAGAGGATTTACTGCCATATTAAAACATGATTGATTTTCTTCTCTTGACATAAGTTATCACTATTATAAAT---A---AAAATTTCCAAAATTAGCTCCACACGGTCTGAAAA--GCCCTG i dasNov3.JH569188 C 0 C 0 e canFam3.chr1 56243470 258 + 122678785 I a score=419327.000000 s hg38.chr6_KB021644v2_alt 184823 41 + 185823 GAGGCCG-TGGCTCTGGCCTCTCAGCCTTGCTCACACCCAGA s panTro5.chr6 173647785 41 + 175400573 GAGGCCG-TGGCTCTGGTCTCTCAGCCTTGCTCACACCCAGA i panTro5.chr6 C 0 C 0 s panPan2.chr6 171873234 41 + 173848474 GAGGCCG-TGGCTCTGGTCTCTCAGCCTTGCTCACACCCAGA i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11559547 41 - 12463322 GAGGCCA-TGGCTCTGGTCTCTCAGCCTTGCTCACACCCAGA i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156390734 41 + 157873769 GAGGCCG-TGGCTCCGGTCTCTTGGCCTTGCTCACACCCACA i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170417379 41 + 172585720 GAGGCCG-TGGCTCTGGTCTCTCAGCCCTGCTCACACCCAGA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169160662 41 - 170955103 GAGGCCG-TGGCTCTGGTCTCTCAGCCCTGCTCACACCCAGA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8446545 41 + 10161646 GAGGCCG-TGGCTCTGGTCTCTCAGCCCTGCTCACACCCAGA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1477736 41 + 3144229 GAGGCCG-TGGCTCTGGTCTCTCAGCCCTGCTCACACCCAGA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96762088 41 + 98384682 GAGGCTG-TGGCTCTGGTCTCTCGGCCCTGCTCACACCCAGA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8329598 41 - 10857215 GAGGCCG-TGGCTCTGGTCTCTCAGCCCTGCTCACACCCAGA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15684315 41 - 23502949 GAGGCCG-TGGCTCTGGTCTCTCAGCCCTGCTCACACCCAGA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169975408 41 + 171630274 GAGGCCG-TGGGTCCGGCCTCTCCGCCCTGCTCACAGCCAGA i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1369596 41 - 2905041 GAGGCCG-TGGGTCGGGCCTCTCTGCCCTGCTCACAGCCAGA i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1339954 41 - 2164891 GAGGCCA-TGGGTCTGGCCTCTCCGCCCTGCTCACAGCCAGG i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1583606 41 - 1813869 GAGGCTG-TGGCTCTGGCCTCTCTGCCCTGCTCACAGCCAGA i aotNan1.NW_018494782v1 C 0 C 0 s dasNov3.JH569188 675663 42 + 760995 GAGGTAACTGACTCTAGTTTCTTGCTCCTGCTGTCAAATGGT i dasNov3.JH569188 C 0 C 0 e otoGar3.GL873575 11004588 1009 - 12073884 I e canFam3.chr1 56243470 258 + 122678785 I a score=1009436.000000 s hg38.chr6_KB021644v2_alt 184864 116 + 185823 --CCCCTGCACCC-TTCTGTGAAGAA--CCCCTGTGA-----------------------------------------------------------------------------------------TTTCAATCCTGCAGTGTGAAGTTGCCACGACGGAGCCAGCA-TCTCTATCCAAGT--CTCCTG-GGTGATAGAACGCATATGTAGGCC s panTro5.chr6 173647826 116 + 175400573 --CCCCTGCACCC-TTCTGTGAAGAA--CCCCTGTGA-----------------------------------------------------------------------------------------TTTCAATCCTGCAGTGTGAAGTTGCCACGACTGAGCCAGCA-TCTGTATCCAAGT--CTCCTG-GGTGATAGAACACATATGTAGGCC i panTro5.chr6 C 0 C 0 s panPan2.chr6 171873275 116 + 173848474 --CCCCTGCACCC-TTCTGTGAAGAA--CCCCTGTGA-----------------------------------------------------------------------------------------TTTCAATCCTGCAGTGTGAAGTTGCCACGACTGAGCCAGCA-TCTGTATCCAAGT--CTCCTG-GGTGATAGAACACATATGTAGGCC i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11559588 116 - 12463322 --CCCCTGCACCC-TTCTGTGAAGAA--CCCCTGTGA-----------------------------------------------------------------------------------------TTTCAATCCTGCAGTGTGAAGTTGCCACGACTGAGCCAGCA-TCTGTATCCAAGT--CTCCTG-GGTGATAGAACACATATGTGGGCC i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156390775 116 + 157873769 --CCCCTGCACCC-TTCTGTGAAGAA--CCCCTGTGA-----------------------------------------------------------------------------------------TTTCAATCCTGCAGCATGAAGTTGCCACGACTGAGCCAGCA-TCTGTATCCAAGT--CTCCCG-GGTGATAGAACACATATGTGGGCC i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170417420 115 + 172585720 --CCCCTGCACCC-TTCTGTGAAGAG--CCCCTGTGA-----------------------------------------------------------------------------------------TTTCGAGCCTGCAGTGTGAAGTTGCCATGACTGAGTTAGCA-TCTGT-TTCAAGT--CTCCTG-GGTGACAGAACACATATTTGGGTC i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169160703 115 - 170955103 --CCCCTGCACCC-TTCTGTGAAGAG--CCCCTGTGA-----------------------------------------------------------------------------------------TTTCGAGCCTGCAGTGTGAAGTTGCCATGACTGAGTTAGCA-TCTGT-TTCAAGT--CTCCTG-GGTGACAGAACACATATTTGCGTC i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8446586 115 + 10161646 --CCCCTGCACCC-TTCTGTGAAGAG--CCCCTGTGA-----------------------------------------------------------------------------------------TTTCGAGCCTGCAGTGTGAAGTTGCCATGACTGAGTTAGCA-TCTGT-TTCAAGT--CTCCTG-GGTGACAGAACACATATTTGGGTC i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1477777 115 + 3144229 --CCCCTGCACCC-TTCTGTGAAGAG--CCCCTGTGA-----------------------------------------------------------------------------------------TTTCGAGCCTGCAGTGTGAAGTTGCCATGACTGAGTTAGCA-TCTGT-TTCAAGT--CTCCTG-GGTGACAGAACACATATTTGGGTC i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96762129 115 + 98384682 --CCCCTGCACCC-TTCTGTGAAGAG--CCCCTGTGA-----------------------------------------------------------------------------------------TTTCGAGCCTGCAGTGTGAAGCTGCCATGACTGAGTCAGCA-TCTGT-TTCAAGT--CTCCTG-GGTGACAGAACACATATGTGGGTC i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8329639 115 - 10857215 --CCCCTGCACCC-TTCTGTGAAGAA--CCCCTGTGA-----------------------------------------------------------------------------------------TTTCGAGCCTGCAGTGTGAAGTTGCCATGACTGAGTTAGCA-TCTGT-TTCAAGT--CTCCTG-GGTGACAGAACACATATTTGGGTC i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15684356 115 - 23502949 --CCCCTGcaccc-ttctgtgaagag--cccctgtga-----------------------------------------------------------------------------------------tttcgatcctgcagtgtgaagttGTCATGACTGAGTTAGCA-TCTGT-TTCAAGT--CTCCTG-GGTGACAGAACACATATTTGGGTC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169975449 104 + 171630274 --CCCCTGC-CCCGTTCTGCGAGGAG--CCCCTGTGA-----------------------------------------------------------------------------------------CTTCAGTCCTGCGGTG-GAAGTTGCCGTGGCTGGGTCAGCA-TCTATATTCAAGT--CTCCCG-GGCGACAGAACAC----------- i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1369637 115 - 2905041 --GCCCTGC-CGC-TTCTGTGAAAAG--CCCCTGTGATT---------------------------------------------------------------------------------------TTTCAGTCCTGC-GTG-GACATTGCCGCGGCTGAATCAGCA-TCTGTATTCAAGT--CTCCTG-GGTGGCAGAACACATATTTGGGCC i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1339995 114 - 2164891 --CCCCTTC-CCC-TTCTGTGAAGAG--CCCCTGTGA-----------------------------------------------------------------------------------------TTTCGGTCCTGTGGTG-GAAGTTGCTATGGCTGAATCAGCA-TCTGTATTCAAGT--CTCCTG-GGTGACAGAACACATATTTGGGCC i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1583647 203 - 1813869 --CCCCTGC-CCC-TTCTGTGAAGAG--CCCCTGTGATTTCACAGCCAGACCCCTGCCCCTTCTGTGAAGAGCCCCCTGTGATTTCACAGCCAGACCCCTGCCCCTTCTGTGAAGAGCCCCTGTGATTTCAGCCCTGCGGTG-GAAGTTGCCATGGCTGAATCAGCA-TCTGTGTTCAAGT--CTCCTG-GGTGACAGAACACATATTTGGGCC i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 11005597 102 - 12073884 --CTCCCTCACCA-TCCTG-GTGGGA--CCTCCACAA-----------------------------------------------------------------------------------------CTCTGGCACTTGTGTGTGATGCCATC-TGGCTACATCTGCA-CCTTTACTCAAGT--CTCCTC-CAGGGCAACACA------------ i otoGar3.GL873575 I 1009 C 0 s dasNov3.JH569188 675705 123 + 760995 CTTCCCTGA-CCT-TTCTGTTAAGAAACCCACTATTA-----------------------------------------------------------------------------------------TAACAATATAAATGTACAAAGATACCACTATTGAATTTGCATTCTTTACTTAAGTACATCTTGTAGTGATAGAACAAAGATTTGGTCC i dasNov3.JH569188 C 0 C 0 e canFam3.chr1 56243470 258 + 122678785 I a score=3450415.000000 s hg38.chr6_KB021644v2_alt 184980 419 + 185823 AAACTCTGCA-GCAC----TGA-TGCAGCTGGTG--------------ATGACTAAACATGGCAGATTTACCTAGTCAGTGAC--TTTATGCAGGAAGAA--------ACCGAATGC-ATGTGCGCATCTTGAGATGC-------------------GTGGGCC-------------TTCTGTCCTGTGTGCAGCT----GCGTGTGCTCCCCCACTGG-----CCCGGCCTGCGCGCTTTTCTGCCCCG----------------------------------------------------------------GCACTCGCCAGCTGCCCAGTCCAGCTCAAGCCGGGATTTTCCACGGCTGCCTCTGAACGGTCT-CCAAGCCGCAGCTTCCTCTCCTCCTTCTGAG------CTCCAAGT-AC-CATT-------------GCTATAAGGGGA-CAGGAGCAGGGTGGGAGAT--------TGTCCTgagtcttgac--tctgactgt----gctgtgtg--------------cagg------------gttatcacctttcca-catcccactttcttcgtctttacagtggggagagcaa-----cttt-tacctttcc s panTro5.chr6 173647942 419 + 175400573 AAACTCTGCA-GCAC----CGA-TGCAGCTGGTG--------------ATGACTAAACGTGGCAGATTTACCTAGTTAGTGAC--TTTATGCAGGAAGAA--------ACCAAATGC-ATGTGCGCATCTTGAGATGC-------------------GTGGGCC-------------TTCTGTCCTGTGTGCAGCT----GCGTGTGCTCCCCCACTGG-----CCCGGCCTGCGCACTTTTCTGCCCCG----------------------------------------------------------------GCACTCGCCAGCTGCCCAGTCCAGCTCAAGCCGGGATTTTCCACGGCTGCCTCTGAACGGTCT-CCAAGCTGCAGCTTCCTCTCCTCCTTCTGAG------CTCCAAGT-GC-CATT-------------GCTATAAGGGGA-CAGGAGCAGGGTGGGAGAT--------TGTCCTgagtcttgac--tctgactgt----gctgtgtg--------------cagg------------gttatcacctttcca-catcccactttcttcgtctttacagtggggagagcaa-----cttt-tacctttcc i panTro5.chr6 C 0 C 0 s panPan2.chr6 171873391 419 + 173848474 AAACTCTGCA-GCAC----CGA-TGCAGCTGGTG--------------ATGACTAAACGTGGCAGATTTACCTAGTTAGTGAC--TTTATGCAGGAAGAA--------ACCAAATGC-ATGTGCGCATCTTGAGATGC-------------------GTGGGCC-------------TTCTGTCCCGTGTGCAGCT----GCGTGTGCTCCCCCACTGG-----CCCGGCCTGCGCACTTTTCTGCCCCG----------------------------------------------------------------GCACTCGCCAGCTGCCCAGTCCAGCTCAAGCCGGGATTTTCCACGGCTGCCTCTGAACGGTCT-CCAAGCTGCAGCTTCCTCTCCTCCTTCTGAG------CTCCAAGT-GC-CATT-------------GCTATAAGGGGA-CAGGAGCAGGGTGGGAGAT--------TGTCCTgagtcttgac--tctgactgt----gctgtgtg--------------cagg------------gttatcacctttcca-catcccactttcttcgtctttacagtggggagagcaa-----cttt-tacctttcc i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11559704 419 - 12463322 AAACTCTGCA-GCAC----CGA-TGCAGCTGGTG--------------ATGACTAAACGTGGCAGATTTACCTAGTTAGTGAC--TTTATGCAGGAAGAA--------ACTGAATGC-ATGTGCGCATCTTGAGATGC-------------------GTGGGCC-------------TTCTGTCCTGTGTGCAGCT----GCGTGTGCTCCCCCACTGG-----CCTGGCCTGCGCGCTTTTCTGCCCCG----------------------------------------------------------------GCACTCGCCAGCTGCCCAGTCCAGCTCAAGCCGGGATTTTCCACGGCTGCCTCTGAATGGTCT-CCAAGCTGTAGCTTCCTCTCCTCCTTCTGAG------CTCCAAGT-GC-CATT-------------GCTATAAGGGGA-CAGGAGCAGGGTGGGAGAT--------TGTCCTgagtcttgac--tctgactgt----gctgtgtg--------------cagg------------gttatcacctttcca-catcccactttcttcgtctttacagtggggagagcaa-----cttt-tacctttcc i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156390891 480 + 157873769 AAACTCTGCA-ACAC----CGA-TGCAGCTGGTG--------------ATGACTAAACGTGACAGATTTACCTAGTTAGTGAC--TTTATGAAGGAAGAC--------ACAGAATGC-CTGTGTGCATCTTGAGATGC-------------------GTGGGCC-------------TTCTGTCCCGCGTGCAGCT----GCGTGTGCTCCCCTGCTGG-----CCCGGCCTGCGC---CTTCTGTCCCGCGTGCAGCTGCGTGTGCTCCCCTGCTGGCCTGGCCTGCGCCTTCTGTCCTGTGTGCAGCTGCGTGTGCTCCCCCACTGCCCAGTCTAGCTCAAGCCGGGATTTTCCACGGCTGCCTCTGAATGGTCT-CCAGGCTGCAGCTTCCTCACCTCTTTCTGAG------CTCCAAGT-GC-CATT-------------GCTGTAAgggga-caggagctgggttggagat--------tgtcctgagtcttgac--tctgactgt----gctgtgtg--------------cagg------------gttatcacctttcca-caacctactttcttcgtctttacagtggggagagcaa-----cttt-taccttccc i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170417535 419 + 172585720 AAACTCTGAG-GCAC----CGA-TGCAGCTGATG--------------TTGAATAAATGTGACAGATTTACCTAGTTAGTGACTTTTTATGAAGGAAGAA--------ACCTAATGC-ACGTGTGCGTCTTGAGACGT-------------------GTGGGCC-------------TTCTGTCCCGTGTGCAGCT----GTGTGTGCTCCCCCACTGG-----CCCGGCCTGCGCGCTTTTCTGCCCCG----------------------------------------------------------------GCACTCGGTAGCTGCCCAGTCCAGCTCAAGCCAGGATTTTCCACGGCTGCCTCTGAATGGTCT-CCAGGCT---GCTTCCTCACCTCCTGCTGAG------CTCCAAGT-GC-CATT-------------GCTATGAGGGGA-CAGGAGCAGGGCGGGAGAT--------TGTCCTgagtcttgac--tctgactgt----gcggtgtg--------------cagg------------gttatcacctttaca-catcccactttcttcatctttacagtggggagagcaa-----ttttttaccttccc i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169160818 419 - 170955103 AAACTCTGAG-GCAC----CGA-TGCAGCTGATG--------------TTGAATAAATGTGACAGATTTACCTAGTTAGTGACTTTTTATGAAGGAAGAA--------ACCTAATGC-ACGTGTGCGTCTTGAGACGT-------------------GTGGGCC-------------TTCTGTCCCGTGTGCAGCT----GTGTGTGCTCCCCCACTGG-----CCCGGCCTGCGCGCTTTTCTGCCCCG----------------------------------------------------------------GCACTCGGCAGCTGCCCAGTCCAGCTCAAGCCAGGATTTTCCACGGCTGCCTCTGAATGGTCT-CCAGGCT---GCTTCCTCACCTCCTGCTGAG------CTCCAAGT-GC-CATT-------------GCTATGAGGGGA-CAGGAGCAGGGCGGGAGAT--------Tgtcctgagtcttgac--tctgactgt----gcggtgtg--------------cagg------------gttatcacctttaca-catcccactttcttcatctttacagtggggagagcaa-----ttttttaccttccc i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8446701 417 + 10161646 AAACTCTGAG-GCAC----CGA-TGCAGCTGATG--------------TTGAATAAATGTGACAGATTTACCTAGTTAGTGACTTTTTATGAAGGAAGAA--------ACCTAATGC-ACGTGTGCGTCTTGAGACGT-------------------GTGGGCC-------------TTCTGTCCTGTGCGCAGC------TGTGTGCTCCCCCACTGG-----CCCGGCCTGCGCGCTTTTCTGCCCCG----------------------------------------------------------------GCACTCGGCAGCTGCCCAGTCCAGCTCAAGCCAGGATTTTCCACGGCTGCCTCTGAATGGTCT-CCAGGCT---GCTTCCTCACCTCCTGCTGAG------CTCCAAGT-GC-CATT-------------GCTATGAGGGGA-CAGGAGCAGGGCGGGAGAT--------TGTCCTgagtcttgac--tctgactgt----gcggtgtg--------------cagg------------gctatcacctttaca-catcccactttcttcatctttacagtggggagagcaa-----ttttttaccttccc i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1477892 419 + 3144229 AAACTCTGAG-GCAC----CGA-TGCAGCTGATG--------------TTGAATAAATGTGACAGATTTACCTAGTTAGTGACTTTTTATGAAGGAAGAA--------ACCTAATGC-ACGTGTGCGTCTTGAGATGT-------------------GTGGGCC-------------TTCTGTCCTGGGTGCAGCT----GTGTGTGCTCCCCCACTGG-----CCCGGCCTGCGCGCTTTTCTGCCCGG----------------------------------------------------------------GCACTCGGCAGCTGCCCAGTCCAGCTCAAGCCAGGATTTTCCACAGCTGCCTCTGAATGGTCT-CCAGGCT---GCTTCCTCACCTCCTGCTGAG------CTCCAAGT-GC-CATT-------------GCTATGAGGGGA-CAGGAGCAGGGCGGGAGAT--------TGTCCTgagtcttgac--tctgactgt----gcggtgtg--------------cagg------------gttatcatctttaca-catcccactttcttcatctttacagtggggacagcaa-----ttttttaccttctc i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96762244 419 + 98384682 AAACTCTGAA-GCAC----CGA-TGCAGCTGATG--------------TTGAATAAATGTGACAGATTTACCTAGTTAGTGACTTTTTATGAAGGAAGAA--------ACCTAATGC-ACGTGTGCGTCTTGAGACGT-------------------GTGGGCC-------------TTCTGTCCTGTGTGCAGCT----GTGTGTGCTCCCCCACCGG-----CCCGGCCTGCGCGCTTTTCTGCCCCG----------------------------------------------------------------GCACTCGGCAGCTGCCCAGTACGGCTCAAGCCAGGATTTTCCACGGCTGCCTCTGAACGGTCT-CCAGGCT---GCTTCCTCACCTCCTGCTCAG------CTCCAAGT-GC-CATT-------------GCTATGAGGGGA-CAGGAGCAGGGCAGGAGAT--------TGTCCTGAGTCTTGAC--TCTGACTGT----GCAGTGTG--------------CAGG------------GTTATCacctttaca-catcccactttcttcatctttacagtggggagagcaa-----ttttttaccttccc i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8329754 419 - 10857215 AAACTCTGAG-GCAC----CGA-TGCAGCTGATG--------------TTGAATAAATGTGACAGATTTACCTAGTTAGTGACTTTTTATGAAGGAAGAA--------ACCTAATGC-ACGTGTGCGTCTTGAGACGT-------------------GTGGGCC-------------TTCTGTCCTGTGTGCAACT----GTGTGTGCTCCCCCACTGG-----CCCGGCCTGCGCGCTTTTCTGCCCCG----------------------------------------------------------------GCACTCGGCAGCTGCCCAGTCCAGCTCAAGCCAGGATTTTCCACGGCTGCCTCTGAATGGTCT-CCAGGCT---GCTTCCTCACCTCCTGCTGAG------CTCCAAGT-GC-CATT-------------GCTATGAGGGGA-CAGGAGCAGGGCGGGAGAT--------TGTCCTgagtcttgac--tctgactgt----gtggtgtg--------------cagg------------gttatcacctttaca-catcccactttcttcatctttacagtggggacagcaa-----ttttttaccttctc i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15684471 415 - 23502949 AAACTCTGAG-GCAC----CGA-TGCAGCTGATG--------------TTGAATAAATGTGACAGATTTACTGAGTTAGTGACTTTTTATGAAGGAAGAA--------ACCTAATGC-ACGTGTGCGTCTTGAGACGT-------------------GTGGGCC-------------TTCTGTCCTGTGTGCAGCT----GTGTGTGCTCCCCCACTGG-----CCTGGCCTGCGTGCTTTTCTGCCCTG----------------------------------------------------------------GCACTCGGCAACTGCCCAGTCCAGCTCAAGCCAGGATTTTCCACGGCTGCCTCTGAATGGGCT-CCAGGCT---GCTTCCTCACCTCCTGCTGAG------CTCCAAGT-GC-CATT-------------GCTATGAGGGGA-CAGGAGCAGGGCAGGAGAT--------TGTCTTGAGTCTTGAC--TCTGACTGT----GCGGTGTG--------------CAGG------------GTTATCACCTTTACA-TATCCCACTTTCTTCATCTTTACAGTGGGGAGAGCAA-----TTTT----CTTCCC i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169975553 442 + 171630274 --ACCCTGCG-GTAC----CAA-TGCAGCTGGCGAAGGCAAGTGTGTTACGACTAAACGTGACAGATTCACC--GTTAGTGACTTTTTCAGAAGGAAGAG--------GCCTGATGC-GTGTG-ATGTCCAGAGATGC-------------------GTGGGCC--------------TCCGTCCCGCGTGCAGCTG-GGGTGTGTGCTCCCC-ACC-G-----CCCGCCCTGCACGCTTGTCCGCCCCG----------------------------------------------------------------GCACTCGCCAGCTGCCCAGGCCCCCTCCAGCC-GGA-TTCCCACAACTGCCTCTGAATGGTCT-CCAGGCCGCAGCTTCCTCTCCTCCTTCTGAG------CCTCAAGT-GC-CACT-------------GCGACCAGGGGACCAGGAGCA-GGCGGGAGAG--------CGTCCTCAGCCTTGAC--TCGGACTGC----GCGGTGTGGTGGCCGAGGCAGGCAGG------------GTTATCACCCTCCTA-CATCCCACTTCCTTCATCTTTAGGGACGGGACAGAAA-----TTCT-TACCTTCCC i calJac3.chr4 C 0 C 0 s saiBol1.JH378287 1369752 448 - 2905041 AAACCCTGCA-GTAC----CCGTTGCAGCTGGTGAAGGAAAGTGTGTTATGACTAAACGTGGCACATTCACCCAGTTAGTGACTTTTTCAGAAGGAAGAG--------GCCTAACTC--TGTG-ATGTCCTGAGGTGC-------------------GTGGGCC--------------TCCGTCCCGCGTGCAGCTGCGTGTGTGTGCTCCCC-ACCAG-----CCCGCCCTGCACGCTTTTCCGCCCTG----------------------------------------------------------------GCACGTGCCAGCTGCCCAGGCCCCCTCAAGCC-GGATTTTCCACAACTGCCTCTGAGCGGTCT-CCAGGCCACAGCCTCCTCACCTCCTTCTGAG------CTTCAGGT-GC-CACC-------------GCTACCAGGCGACCAGGAGCA-GGC-GGAGAG--------TGTCCTCAGCCTTGAC--TCTGACTGT----GCTGTGTGGTGGCCGACACGGGCAGG------------GTTATCGCCTTCCTG-CATCCCACTGCCTTCATCGTTAGAGACGGGACAGCAG-----TTGT-TACCTTCCC i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1340109 447 - 2164891 AAACCCTGCG-GTAC----CCA-TGCAGCTGGTGAAGGAAAGTGTGTTATGACTAAACGTGACAGACTCACCCAGTTAGTGACTTTTTCAAAAGGAAGAG--------GCCTAATGC--TGTG-ATGTCCTGAGGTGC-------------------GTGGGCC--------------TCCGTCCCACATGCAGCTGCGTGTGTGTACTCCCC-ACCGG-----CCCACCCTGCACACTTTTCTGCCC-G----------------------------------------------------------------GCATGTGCCAGCTGCCCAGGCCCCCTCAAGCC-GGATTTTCCACAACTGCCTCTGACCGGTCT-CTAGGCCGCAGCTTCCTCACCTCCTTCTGAG------CTTTAGGT-GC-CACC-------------GGTACCAGGGGACCAGGAGCA-GGCAGGAGAG--------TGTCCTCAGCCTTGAC--TCTGACTGT----GCTGTGTGGCGGCCGAGATGTACAGG------------GTTATCACCTTCCCG-CATCCCACTTCCTCCATCGTTAGAGACGGGACAGCAA-----TTGT-TACCGTCCC i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1583850 443 - 1813869 AAACGCTGCG-GTAC----CAG-TGCAGCTGGTGAGGG-AAGTGTGTTACGACTAAGCGTGACACATTTACCCAGTTAGTGACTTTTTCAGAAGGAAGAG--------GCCTAATGC-GTGTG-GTGTCCTGAGATGC-------------------GTGAGCC--------------TCCGTCCCGCGTGCAGCC--GCGTGTGTGCTGCCC-ACCGG-----CCCGCCCTGCACGCTTTTCTGCCCCG----------------------------------------------------------------GCACTCGCCAGCTGCCCGGGCCCCCTCAAGCC-GGATTTTCCACAACTGCCTGTGAATGGTCT-CCAGGCCGCAGCTTCCTCACCTCCTTCTGAG------CTTCAAGT-GC-CACT-------------GCTACCAGGGGACCGGGAGCA-GGCGGGAGAG--------TGTCCTCAGCCTTGAC--TCTGACTGT----GCTGTGCGGTGGCCGAGACGTGCAGG------------GTTATCACCTTCCCA-CATCCCACTTCCTTCATCTTTAGAGACGGGATAGCAA-----TTTT----CCTTCC i aotNan1.NW_018494782v1 C 0 C 0 s otoGar3.GL873575 11005699 430 - 12073884 --GCTCTGCACTCAC----TGT-TGCAACTGGTGATAGAAAGTGTGTGATGATCAGACCTGGGAG-TTTCTCTAATTAGCAG---TTTA-----GGAGAC--------ATGTGGTTG-ATGTGCATGTCTTAGGATATTG-------GATGTACAAGTTGAGCCAATGTTCCAGGACATCTGACCTGTGTGCAGCT----GTG-----ACCCCCACGTT-----CCCAGCAAGC---CCTCACCTCCCAG----------------------------------------------------------------ACTCTCACCAACTGCCCAGGACAGCCCAAGCT-------------GATGCCC---AGTGGTCT-CCAGCCCACAGCTT-----CTGCCATCTGAGTGCCCACTCTAGGA-TG-ACCA-------------GTTGAGAGGGGA-CAGGAGCAGAAGGGAAGAG--------CCACCCTAGAT---GC--TGTGACTGTTGGGACACTGTA--------------CAAA--------------TATCACCTT-CCA-AATGCCAGTTTCTTCATCCTTAAAGTATGCCAAACAGAAGGTCATT-AATCTTTCC i otoGar3.GL873575 C 0 N 0 s canFam3.chr1 56243728 360 + 122678785 AAAGTGTGTG-GCA------GG-TGCATCTGAGA--------------CTG----------------TTACCTAATGCGTAA----TGATGTAAAAAGAA--------AAACAATGTTCTGTGCACGTCTTAGAATGATGTCAATCAGGTGTGAAGAATGAGCC--------------CCTGTGCCTCCTGCTTCT----GT-CCTGCTTTCCTATAAGCTGCTCCCCGTGTGGGTGC-ACACTGCCCCA----------------------------------------------------------------ACAC---CCACCTGTCCTGT---GCTCAGGCTCAGA-------------------AGAGCTCT-GGAGCCCATGGTTTCTCCACCTC-TTCTGGG------TTCCAGGT-ACTCAGT-------------GT------GCCA-CAGAAGCAGGCCCACCATG--------CACCCTGGATCCGAACCACCTGTCTGT-------GTCTG-----------------------------------CACCTTGACATCACCCCA---------------------GGGCAGCAG-----TGTT-CACCTCTCC i canFam3.chr1 I 258 C 0 s dasNov3.JH569188 675828 463 + 760995 AAGCAGTGTT-TTACAGAAAGA-CACAGCTGATG--GTGAAGTGTGTGACAATGAAACCCGAGAGTTCTACCAAATTAGTAAATTATCAACAACAAAAAAGAAAAACTAAATAATTT-ATGTGCCAGTCTTAGGATGC---------TAGGTCTAAAAAGGAAC-------------CAATGTCCCTCATAATTCT--------GCCCTTTCTGATCTG-----TCTGTACTGCTTGCTCTTT--CCCTT----------------------------------------------------------------TCTCTCTAC-----------CCTTCTAAAGCCTATTGTTTGCACATTAGCCTATGGAT--TCTACCAACCAGAAGTCTTCTCACCTCCTTCTGAC------CTCAAAGCAGC-TATCATGATgacagctggctataatggga-atgggataggaagtaaaataagtcctaggtctcaagccttgac--tgctactta----atggccag--------------cggaccttagattcatgactttacctttctg-aatggtac---catcatctttcaaactggaataagat-----actt-ttcc----- i dasNov3.JH569188 C 0 C 0 a score=612073.000000 s hg38.chr6_KB021644v2_alt 185399 68 + 185823 catcccga----------agcagg-----gctgtggtggtaggaagatcaaa-gaaatTGCTTTAGCTTTTAAAAATAGACAAG s panTro5.chr6 173648361 68 + 175400573 catcctga----------agcagg-----ggtgtggtggtaggaagatcaaa-gaaatTGCTTTAGCTTTTAAAAATAGACAAG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171873810 68 + 173848474 catcctga----------agcagg-----ggtgtggtggtaggaagatcaaa-gaaatTGCTTTAGCTTTTAAAAATAGACAAG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11560123 68 - 12463322 catcctga----------agcagg-----ggtgtggtggtaggaagatcaaa-gaaatTGCTTTAGCTTTTAAAAATAGACAAG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156391371 68 + 157873769 catcctga----------agcagg-----ggtgtggcggtaggaagatcaaa-gaaatTGCTTTAGCTTTTAAAAATAGAGAAG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170417954 64 + 172585720 catcctga----------agcagg-----ggtgtggt----ggaagatcaaa-GAAAGTGCTTTAGCTTTTAAAAATAGAGAAA i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169161237 64 - 170955103 catcctga----------agcagg-----ggtgtggt----ggaagatcaaa-GAAAGTGCTTTAGCTTTTAAAAATAGAGAAA i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8447118 64 + 10161646 catcctga----------agcagg-----ggtgtggt----ggaagatcaaa-GAAAGTGCTTTAGCTTTTAAAAATAGAGAAA i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1478311 64 + 3144229 catcctga----------agcagg-----ggtgtggt----ggaagatcaaa-GAAAGTGCTTTAGCTTTTAAAAATAGAGAAA i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96762663 64 + 98384682 cagcctga----------agcagg-----ggtgtggt----ggaagatcaaa-GAAAGTGCTTTAGCTTTTAAAAATAGAGAAA i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8330173 64 - 10857215 catcctga----------agcagg-----ggtgtggt----ggaagatcaaa-GAAAGTGCTTTAGCTTTTAAAAATAGAGAAA i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15684886 64 - 23502949 CATCCTGA----------AGCAGG-----GGTGTGGT----GGAATATCAAA-GAAAGTGCTTTAGATTTTAAAAATAGAGAAA i colAng1.NW_012114488v1 C 0 C 0 s calJac3.chr4 169975995 72 + 171630274 CGTCCTGAGTTT------AGCAGG-----TGTATGGTGTGAGGAAGATCAAA-GAACGTGCTTTGGTTTTTAAAAACAGAGAAg i calJac3.chr4 C 0 N 0 s saiBol1.JH378287 1370200 72 - 2905041 CGTCCTGAGTTT------CGCAGG-----TGTGTGGTGTTAGGAGAATCCAA-GAAAGTGCTTCGGCTTTTAAAAACGGAGAAG i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1340556 72 - 2164891 CGTCCTGAATTT------AGCAGG-----TGTGTGGTGTTAGGAAGATCAAA-GAAAGTGCTTCGGCTTTTAAAAACGGAGAAG i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1584293 71 - 1813869 CAGCCTGAATTT------AGCAGG-----TGTGTGGTGTTAGGAAGATCAAA-GAAAGTGCTTTGG-TTTTGAAAACAGAGAAG i aotNan1.NW_018494782v1 C 0 C 0 s canFam3.chr1 56244088 83 + 122678785 CTTCCAGGGCCTGGTAGAGGCAGGGGGATGGGGTGGTAACAGGAGGATGACATGATAGTGCGCTGGCTTTTGAAAACAGGAAG- i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 676291 56 + 760995 catcctgg----------agtggg------------------aaagataaaatgaaaGGGCTTTAGCTTCTGAAAATAGAAAAG i dasNov3.JH569188 C 0 C 0 a score=142299.000000 s hg38.chr6_KB021644v2_alt 185467 14 + 185823 AAGCCAACAGTTCT s panTro5.chr6 173648429 14 + 175400573 AAGCCAACAGTTCT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171873878 14 + 173848474 AAGCCAGCAGTTCT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11560191 14 - 12463322 AAGCCAACAGTTCT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156391439 14 + 157873769 AAGCCAAGAGTTTG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170418018 14 + 172585720 AAGCCAACAGTTCT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169161301 14 - 170955103 AAGCCAACAGTTCT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8447182 14 + 10161646 AAGCCAACAGTTCT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1478375 14 + 3144229 AAGCCAACAGTTCT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96762727 14 + 98384682 AAGCCAACAGTTCT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8330237 14 - 10857215 AAGCCAACAGTTCT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15684950 14 - 23502949 AAGCCAACAGTTCT i colAng1.NW_012114488v1 C 0 C 0 s saiBol1.JH378287 1370272 14 - 2905041 ACGCCAACAGTTCT i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1340628 14 - 2164891 ATGCCAACAGTTCT i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1584364 14 - 1813869 ATGCCAACAGTTCT i aotNan1.NW_018494782v1 C 0 C 0 s canFam3.chr1 56244171 13 + 122678785 GAGTT-GCAGTTCT i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 676347 14 + 760995 AAACCAACAGTTCT i dasNov3.JH569188 C 0 I 159 a score=984956.000000 s hg38.chr6_KB021644v2_alt 185481 122 + 185823 TGGGTGGACGTGTCAGACCTGTTCCCGACAGGA---CAGATGGCA-GCACAGCCAGACCCGCTCAGTGTCCCAAGAGCAGCCCC-GGCAAAGCAAGGC-GGGAGCCGCCCCTCACCAGCCCAGCTGTG s panTro5.chr6 173648443 122 + 175400573 TGGGTGGACGTGTCAGACCTGTTCCCTACAGGA---CAGATGGCA-GCACAGCCAGACCCACTCAGTGTCCCAAGAGCAGCCCC-GGCAAAGCAAGGC-GGGAGCCGCCCCTCACCAGCCCAGCTGTG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171873892 122 + 173848474 TGGGTGGACGTGTCAGACCTGTTCCCTACAGGA---CAGATGGCA-GCACAGCCAGACCCACTCAGTGTCCCAAGAGCAGCCCC-GGCAAAGCAAGGC-GGGAGCCGCCCATCACCAGCCCAGCTGTG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11560205 122 - 12463322 TGGGTGGATGTGTCAGACCTGTTCCCGACAGGA---CAGATGGCA-GCACAGCCAGACCCGCTCAGTGTCCCAAGAGCAGCCCC-AGCAAAGCAAGGC-GGGAGCCGCCCCTCACCAGCCCAGCTGTG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156391453 122 + 157873769 TGGGTGGACGTATCAGACCTGTTCCCAACAGGA---CAGATGGCA-GCACAGCCAGACCCTCTCAGTGTCCCAAGAGCAGCCCC-GGCAAAGCAAGGC-GGGAGCCGCCCCTCACCAGCCCGGCTGTG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170418032 124 + 172585720 TGGGTGGACATATCAGACCTGTTCCCAACAGGA---CAGATGGCA-GCACAGCCAGACCCGCTCTGTGTCCCAAGAGCAGCCCCGGGCAGAGCAAGGTGGGGAGCCGCCCCTCACCAGCCCAGCTGTT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169161315 124 - 170955103 TGGGTGGACATATCAGACCTGTTCCCGACAGGA---CAGATGGCA-GCACAGCCAGACCCGCTCTGTGTCCCAAGAGCAGCCCCGGGCAGAGCAAGGTGGGGAGCCGCCCCTCACCAGCCCAGCTGTT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8447196 124 + 10161646 TGGGTGGACATATCAGACCTGTTCCCGACAGGA---CAGATGGCA-GCACAGCCAGACCCGCTCTGTGTCCCAAGAGCAGCCCCGGGCAGAGCAAGGTGGGGAGCCGCCCCTCACCAGCCCAGCTGTT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1478389 124 + 3144229 TGGGTGGACATATCAGACCTGTTCCCGACAGGA---CAGATGGCA-GCACAGCCAGACCCGCTCTGTGTCCCAAGAGCAGCCCCGGGCAGAGCAAGGTGGGGAGCCGCCCCTCACCAGCCCAGCTGTT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96762741 124 + 98384682 TGGGTGGACATATCAGACCTGTTCCCGACAGGA---CAGATGGCA-GCACAGCCAGACCCGCTCTGTGTCCCAAGAGCAGCCCTGGGCAGAGCAAGGTGGGGAGCCGCCCCTCACCAGCCCAGCTGTT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8330251 124 - 10857215 TGGGTGGACATATCAGACCTGTCCCTGACAGGA---CAGATGGCA-GCACAGCCAGACCCGCTCTGTGTCCCAAGAGCAGCCCCGGGCAGAGCAAGGTGGGGAGCCACCCCTCATCAGCCCAGCTGTT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15684964 124 - 23502949 TGGGTGGACATATCAGACCTGTCCCCGACAGGA---CAGATGGCA-GCACAGCTAGACCCGCTCTGTGTCCCCAGAGCAGCCCCGGGCAGAGCAAGGTGGGGACCCGCCCCTCACCAGCCCAGCTGTT i colAng1.NW_012114488v1 C 0 C 0 s saiBol1.JH378287 1370286 121 - 2905041 TGGGTGGACGTGTCAGACCTGTGCCAGACGGGA---CAGACGGCA-GCACAGCCAGG-CCGCTCAGTGGCCCACGAGCAG-CCGGGGCAGAGCAAGGAGCGGAGCCG-CCCTCACCGGCCCAGCGGTC i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1340642 123 - 2164891 CGGGTGGACGTATCAGACCTGTGCCAGACAGGA---CAGACAGCA-GCACAGCCAGG-CCGCTCAGTGGCCCAAGAGCAGCCCCGGGCAGAGCAAGGAGGGGAGCCGCCCCTTACCAGTGCAGCTGTC i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1584378 122 - 1813869 TGGGTGGACGTATCAGACCTGTGCCGGACAGGA---CAGACAGCA-GCACAGCCAGG-CCGCTCAGTGTCCCAAGAGCAG-CCCCAGCGGAGCAAGGAGAGGAGCCGCCCGTCACCAGCCCAGCTGTC i aotNan1.NW_018494782v1 C 0 C 0 s canFam3.chr1 56244184 82 + 122678785 GGAGTGGAGGCATCACACCTGCATGCAACTGGGTGCCAGGGGGCACACACAGTGAGGCCC---------------------------------------TGCACCTGCTAC---CTGACCCTGC---- i canFam3.chr1 C 0 C 0 e dasNov3.JH569188 676361 159 + 760995 I a score=1925269.000000 s hg38.chr6_KB021644v2_alt 185603 215 + 185823 CTCACACA------CCCCCT-CTGCAATGTCGGATGGTTCACAACAGGATTTATCGTTTTCTTTAAAGTC-GCCTTGTGGAAACTCTTGTATCCC--------TTA----------CTCTCTTGTGCTGTTATTGAAGGTTTAATGGGTTCGTTTTGACTCCTCAGATAGACTGTGCTTGATATTTCTTGC---AAGCTCAACACGAT------------GGCTGGAACATGTAAGTGTGTGAGT-TAAAAACAGTT s panTro5.chr6 173648565 215 + 175400573 CTCACACA------CCCCCT-CTGCAATGTCGGATGGTTCACAACAGGATTTATCGTTTTCTTTAAAGTC-GCCTTGTGGAAACTCTTGTATCCC--------TTA----------CTCTCTTGTGCTGTTATTGAAGGTTTAATGGGTTCGTTTTAACTCCTCAGATAGACTGTGCTTGATATTTCTTGC---AAGCTCAACACGAT------------GGCTGGAACATGTAAGTGTGTGAGT-TAAAAACAGTT i panTro5.chr6 C 0 C 0 s panPan2.chr6 171874014 215 + 173848474 CTCACACA------CCCCCT-CTGCAATGTCGGATGGTTCACAATAGGATTTATCGTTTTCTTTAAAGTC-GCCTTGTGGAAACTCTTGTATCCC--------TTA----------CTCTCTTGTGCTGTTATTGAAGGTTTAATGGGTTCGTTTTAACTCCTCAGATAGACTGTGCTTGATATTTCTTGC---AAGCTCAACACGAT------------GGCTGGAACATGTAAGTGTGTGAGT-TAAAAACAGTT i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11560327 215 - 12463322 CTCACACA------CCCCCT-CTGCAATGTCGGATGGTTCACAACAGGATTTGTTGTTTTCTTTAAAGTC-GCCTTGTGGAAACTCTTGTATCCC--------TTA----------CTCTCTTGTGCTGTTATTGAAGGTTTAATGGGTTCGTTTTGACTCCTCAGATAGACTGTGCTTGATATTTCTTGC---AAGCTCAACACGAT------------GGCTGGAACATGTAAGTGTGTGAGT-TAAAAACAGTT i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156391575 215 + 157873769 CTCACACA------CCCCGT-CTGCAATGTCGGATGGTTCACAACAGGATTTACGGTTTTCTTTAAAGTC-ACCTTGTGGAAACTCTCGTATCCC--------TTA----------CTCTCTTGTGCTGTTATTGAAGCTTTAATGGGTTCGTTTTGACTCCTCAGATAGACTGTGCTTGATATTTCTTGC---AAGCTCGACACGAT------------GCCTGGAACATGTAAGTGTGTGAGT-TAAAAAGAGTT i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170418156 215 + 172585720 CTCACACA------CTCCCT-CTGCAACGTCGGATGGTTCAGAACAGGATCTATTGTTTTCTTTAATTTC-GCTTTGTGGAAACCCTTGTATCCC--------TTA----------CTCTCTTGTGCTGTTATTGAAGGTTTAATGGGTTCGTTTTGACTCCTCACATAGACTATGCTTGATAGTTCTTGC---AAGCTCAACACGAT------------GCCTGGAACAGGTAAGTGGGTGAGT-GAAAAACAGTT i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169161439 215 - 170955103 CTCACACA------CTCCCT-CTGCAACGTCGGATGGTTCATAACAGGATCTATTGTTTTCTTTAATTTC-GCTTTGTGGAAACCCTTGTATCCC--------TTA----------CTCTCTTGTGCTGTTATTGAAGGTTTAATGGGTTCGTTTTGACTCCTCACATAGACTATGCTTGATAGTTCTTGC---AAGCTCAACACGAT------------GCCTGGAACAGGTAAGTGGGTGAGT-GAAAAACAGTT i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8447320 215 + 10161646 CTCACACA------CTCCCT-CTGCAACGTCGGATGGTTCACAACAGGATCTATTGTTTTCTTTAATTTC-GCTTTGTGGAAACCCTTGTATCCC--------TTA----------CTCTCTTGTGCTGTTATTGAAGGTTTAATGGGTTCGTTTTGACTCCTCACACAGACTATGCTTGATAGTTCTTGC---AAGCTCAACACGAT------------GCCTGGAACAGGCAAGTGGGTGAGT-GAAAAACAGTT i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1478513 215 + 3144229 CTCACACA------CTCCCT-CTGCAATGTAGGATGGTTCACAACAGGATCTATTGTTTTCTTTAATTTC-GCCTTGTGGAAACCCTTGTATCCC--------TTA----------CTCTCTTGTGCTGTTATTGAAGGTTTAATGGGTTCGTTTTGACTCCTCACATAGACTATGCTTGATAGTTCTTGC---AAGCTCAACACAAT------------GCCTGGAACAGGTAAGTGTGTGAGT-GAAAAACAGTT i cerAty1.NW_012002071v1 C 0 C 0 s chlSab2.chr13 96762865 215 + 98384682 CTCACACA------CTCCCT-CTGCAACGTCGGATGGTTCACAACAGGATCTATTGTTTTCTTTAATTTC-GCCTTGTGGAAACCCTTGTATCCC--------TTA----------CTCTCTTGTGCTGTTATTGAAGGTTTAATGGGTTCGTTTTGACTCCTCATATAGACTATGCTTGATAGTTCTTGC---AAGCTCAACACGAT------------GCCTGGAACAGGTAAGTGTGTGAGT-GAAAAACAGTT i chlSab2.chr13 C 0 C 0 s manLeu1.NW_012106474v1 8330375 215 - 10857215 CTCACACA------CTCCCT-CTGCAATGTCGGATGGTTCACAACAGGATCTATTGTTTTCTTTAATTTC-GCCTTGTGGAAACCCTTGTATCCC--------TTA----------CTCTCTTGTGCTGTTATTGCAGGTTTAATGGGTTCGTTTTGACTCCTCACATAGACTATGCTTGATAGTTCTTGC---AAGCTCAACACGAT------------GCCTGGAACAGGTAAGTGTGTGAGT-GAAAAACAGTT i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15685088 213 - 23502949 CTCACACA------CTCCCT-CTGCAATGTCGGATGGTTCACAACAGGATTTATTGTTTTCTTTAATTTC-GCGTTGTGGAAA--CTTGTATCCC--------TTA----------CTCTCTTGTGCTGTTATTGAAGGTTTAATGGGTTCGTTTTGACTCCTCACACAGACTATGCTTGATAGTTCTTGC---AAGCTCAACACGAT------------GCCTGGAACAGGTAAGTGTGTGAGT-GAAAAACAGTT i colAng1.NW_012114488v1 C 0 C 0 s saiBol1.JH378287 1370407 215 - 2905041 CGCACACA------CGGCCT-CTGCGGTGTGGCACGGTTCACAACACGGTTGATCGGTTCCTCTCATGTC-GCGCTGTAGAAACTCCTGTATGCC--------TTG----------CTCTCTTGTGCTGTTATCGAAGGTTTAATGGGTTCGTTTTGACTCCTCAGCTAGACTGTGCTTGGTATTTCTTGC---CAGCTCAACATGAT------------GCCTGGAACATGTAAGTCTGTGAGT-GAAAAACTGTT i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1340765 215 - 2164891 CTCACACA------CCACCT-CTGCAGCGTGGCATGGTTCACAACAGGATTTATCGTTTCCTCTAATTTC-GCCTTGTGGAAACTCTTGTATCCC--------TTG----------CTCTCTTGTGCTGTTATTGAGGGTTTAATGGGTTCATTTTGACTCCTCAGCTAGACTGTGCTTGATATTTCTTGC---TAGCTCAACACGAT------------GCCTGGAGCATATAAGTGTGTGAGT-AAAAAACAGTT i cebCap1.NW_016107695v1 C 0 C 0 s aotNan1.NW_018494782v1 1584500 215 - 1813869 CTCACGCA------CCGCCT-CTGCACTGGGGCGTGATTCACAACAGGATTGATGGTTTCCTCTAATTTC-GCCTTGTAGAAACTCTTGCATCCC--------TTA----------CTCTCTCGTGCTGTTATGGACGGTTTAATGGGTTCGTTTCGACTCCTCAGCTAGACGGTGCTTGGTATTTCTTGC---TAGCTCAGCACGAT------------GCCTGGAACATTTAAGTGTGTGAGT-AAAAAACAGTT i aotNan1.NW_018494782v1 C 0 N 0 s canFam3.chr1 56244266 214 + 122678785 CTCACAAA------ACCCTTGTTGGAATGTGGGGTGGCTCACGTGAG--------ACTTGTCTTATTGCCAGCCTTCTGAACACTGTCACATCTCTGGGACTGTTC----------CTCTCCTGTACTTGTATTGAATTATTAATATGTCTGCTT-AACTCCCCAAATAGACTATGC-----ACCTCGTGTGCAGAGCTTGAC-CAGT------------GCCTAGAGCACTGGAATACGTGAGTCAAAAAACAGCT i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 676520 232 + 760995 cttacgcaactctgcctcct-ctCTAATGTCAGATGATTCATAATATGATTTGTTGTTTTATT--ATTTA-GCCTTGTGAAATCCATTTTATCCC--------TTAAATTGTTATCCTCTCACGTGCTTCTATTGAACTTTTCATG-------TATGAACTTATAGTTAGACTGTAAGCCAT-CTGTATAT---ACGTTTAATACTGTGTTATTCCCTGAGCCTGGAATGTATTAGTATGCAAAT--AAAAATGGTT i dasNov3.JH569188 I 159 C 0 a score=21090.000000 s hg38.chr6_KB021644v2_alt 185818 2 + 185823 TG s panTro5.chr6 173648780 2 + 175400573 TG i panTro5.chr6 C 0 C 0 s panPan2.chr6 171874229 2 + 173848474 TG i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11560542 2 - 12463322 TG i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156391790 2 + 157873769 TG i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170418371 2 + 172585720 TG i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169161654 2 - 170955103 TG i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8447535 2 + 10161646 TG i macNem1.NW_012011000v1 C 0 C 0 s cerAty1.NW_012002071v1 1478728 2 + 3144229 TG i cerAty1.NW_012002071v1 C 0 N 0 s chlSab2.chr13 96763080 2 + 98384682 TG i chlSab2.chr13 C 0 N 0 s manLeu1.NW_012106474v1 8330590 2 - 10857215 TG i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15685301 2 - 23502949 TG i colAng1.NW_012114488v1 C 0 C 0 s saiBol1.JH378287 1370622 2 - 2905041 TG i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1340980 2 - 2164891 TG i cebCap1.NW_016107695v1 C 0 C 0 s canFam3.chr1 56244480 2 + 122678785 CG i canFam3.chr1 C 0 C 0 s dasNov3.JH569188 676752 2 + 760995 TG i dasNov3.JH569188 C 0 C 0 a score=9100.000000 s hg38.chr6_KB021644v2_alt 185820 1 + 185823 G s panTro5.chr6 173648782 1 + 175400573 G i panTro5.chr6 C 0 C 0 s panPan2.chr6 171874231 1 + 173848474 G i panPan2.chr6 C 0 C 0 s gorGor5.CYUI01015032v1 11560544 1 - 12463322 G i gorGor5.CYUI01015032v1 C 0 C 0 s nomLeu3.chr3 156391792 1 + 157873769 G i nomLeu3.chr3 C 0 C 0 s rheMac8.chr4 170418373 1 + 172585720 G i rheMac8.chr4 C 0 C 0 s macFas5.chr4 169161656 1 - 170955103 G i macFas5.chr4 C 0 C 0 s macNem1.NW_012011000v1 8447537 1 + 10161646 G i macNem1.NW_012011000v1 C 0 C 0 s manLeu1.NW_012106474v1 8330592 1 - 10857215 G i manLeu1.NW_012106474v1 C 0 C 0 s colAng1.NW_012114488v1 15685303 1 - 23502949 G i colAng1.NW_012114488v1 C 0 C 0 s saiBol1.JH378287 1370624 1 - 2905041 G i saiBol1.JH378287 C 0 C 0 s cebCap1.NW_016107695v1 1340982 1 - 2164891 G i cebCap1.NW_016107695v1 C 0 C 0 s canFam3.chr1 56244482 1 + 122678785 G i canFam3.chr1 C 0 N 0 s dasNov3.JH569188 676754 1 + 760995 G i dasNov3.JH569188 C 0 N 0 a score=13200.000000 s hg38.chr6_KB021644v2_alt 185821 2 + 185823 GC s panTro5.chr6 173648783 2 + 175400573 GC i panTro5.chr6 C 0 N 0 s panPan2.chr6 171874232 2 + 173848474 GC i panPan2.chr6 C 0 N 0 s gorGor5.CYUI01015032v1 11560545 2 - 12463322 GC i gorGor5.CYUI01015032v1 C 0 N 0 s nomLeu3.chr3 156391793 2 + 157873769 GC i nomLeu3.chr3 C 0 N 0 s rheMac8.chr4 170418374 2 + 172585720 GC i rheMac8.chr4 C 0 N 0 s macFas5.chr4 169161657 2 - 170955103 GC i macFas5.chr4 C 0 N 0 s macNem1.NW_012011000v1 8447538 2 + 10161646 GC i macNem1.NW_012011000v1 C 0 N 0 s manLeu1.NW_012106474v1 8330593 2 - 10857215 GC i manLeu1.NW_012106474v1 C 0 N 0 s colAng1.NW_012114488v1 15685304 2 - 23502949 GC i colAng1.NW_012114488v1 C 0 N 0 s saiBol1.JH378287 1370625 2 - 2905041 GC i saiBol1.JH378287 C 0 N 0 s cebCap1.NW_016107695v1 1340983 2 - 2164891 GC i cebCap1.NW_016107695v1 C 0 N 0